Query 014698
Match_columns 420
No_of_seqs 519 out of 1396
Neff 11.3
Searched_HMMs 46136
Date Fri Mar 29 07:39:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014698.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014698hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2271 UhpC Sugar phosphate p 100.0 2E-38 4.3E-43 273.0 22.3 368 36-413 66-439 (448)
2 COG2814 AraJ Arabinose efflux 100.0 1.2E-36 2.5E-41 266.0 31.6 350 27-413 38-391 (394)
3 KOG2532 Permease of the major 100.0 2.7E-36 5.9E-41 275.4 25.4 368 46-418 85-456 (466)
4 PRK09556 uhpT sugar phosphate 100.0 2.9E-35 6.2E-40 276.1 26.1 367 29-407 56-448 (467)
5 TIGR00894 2A0114euk Na(+)-depe 100.0 1.3E-34 2.8E-39 272.2 29.3 370 43-419 85-460 (465)
6 PRK10642 proline/glycine betai 100.0 6.1E-34 1.3E-38 268.4 33.1 346 46-412 69-433 (490)
7 PRK09705 cynX putative cyanate 100.0 4.8E-34 1E-38 261.8 30.5 354 28-420 35-393 (393)
8 PRK11663 regulatory protein Uh 100.0 4.1E-34 8.9E-39 265.7 29.6 363 42-415 66-431 (434)
9 TIGR00893 2A0114 d-galactonate 100.0 3.9E-34 8.5E-39 264.1 29.3 363 37-404 32-395 (399)
10 PRK10406 alpha-ketoglutarate t 100.0 3E-33 6.4E-38 260.0 32.7 333 41-406 67-422 (432)
11 PRK03545 putative arabinose tr 100.0 2.5E-33 5.3E-38 257.5 31.4 342 29-409 36-381 (390)
12 TIGR02332 HpaX 4-hydroxyphenyl 100.0 1.3E-33 2.9E-38 260.2 27.0 355 29-395 35-408 (412)
13 TIGR00903 2A0129 major facilit 100.0 3E-32 6.5E-37 246.0 28.6 342 28-405 17-362 (368)
14 PRK09952 shikimate transporter 100.0 1.1E-31 2.3E-36 249.5 31.6 329 49-405 79-430 (438)
15 COG2223 NarK Nitrate/nitrite t 100.0 3.7E-32 8E-37 234.9 26.0 367 12-411 10-404 (417)
16 PRK14995 methyl viologen resis 100.0 6.1E-32 1.3E-36 255.0 29.3 341 29-381 33-412 (495)
17 PRK10091 MFS transport protein 100.0 2.6E-31 5.5E-36 243.2 31.5 345 29-411 30-379 (382)
18 PRK11273 glpT sn-glycerol-3-ph 100.0 7.1E-32 1.5E-36 252.1 28.3 354 42-407 71-434 (452)
19 PRK11551 putative 3-hydroxyphe 100.0 2E-31 4.3E-36 246.5 30.5 335 42-408 58-396 (406)
20 TIGR00881 2A0104 phosphoglycer 100.0 1E-31 2.3E-36 246.4 25.0 343 37-389 33-378 (379)
21 TIGR00900 2A0121 H+ Antiporter 100.0 5.7E-31 1.2E-35 240.2 29.3 319 40-383 40-364 (365)
22 TIGR00891 2A0112 putative sial 100.0 7.5E-31 1.6E-35 242.9 30.1 354 29-392 39-400 (405)
23 TIGR01299 synapt_SV2 synaptic 100.0 3.7E-31 8.1E-36 254.0 28.3 365 37-415 205-740 (742)
24 PRK10213 nepI ribonucleoside t 100.0 1.9E-30 4.1E-35 237.8 31.8 314 44-396 65-379 (394)
25 TIGR00712 glpT glycerol-3-phos 100.0 3.1E-31 6.7E-36 246.9 26.8 363 41-412 68-437 (438)
26 PRK12307 putative sialic acid 100.0 3.6E-31 7.7E-36 246.5 26.4 322 40-384 59-385 (426)
27 TIGR00711 efflux_EmrB drug res 100.0 4E-31 8.6E-36 250.5 27.1 336 35-382 38-410 (485)
28 PRK15075 citrate-proton sympor 100.0 2E-30 4.3E-35 241.2 30.7 306 49-384 71-396 (434)
29 TIGR00890 2A0111 Oxalate/Forma 100.0 9.2E-31 2E-35 239.9 28.1 331 37-399 41-373 (377)
30 TIGR00892 2A0113 monocarboxyla 100.0 1.1E-31 2.4E-36 250.3 21.9 345 47-402 67-415 (455)
31 TIGR00887 2A0109 phosphate:H+ 100.0 8.8E-31 1.9E-35 247.9 27.5 367 40-418 62-498 (502)
32 PRK10489 enterobactin exporter 100.0 5.1E-31 1.1E-35 244.3 25.4 348 37-415 55-406 (417)
33 PRK03699 putative transporter; 100.0 6.4E-30 1.4E-34 235.0 30.7 342 29-407 34-379 (394)
34 TIGR00898 2A0119 cation transp 100.0 4.9E-30 1.1E-34 243.9 30.7 361 37-418 130-504 (505)
35 TIGR00879 SP MFS transporter, 100.0 1.2E-30 2.5E-35 247.2 25.8 370 36-416 73-478 (481)
36 PLN00028 nitrate transmembrane 100.0 5.3E-30 1.1E-34 240.2 29.7 342 45-407 82-432 (476)
37 PRK15034 nitrate/nitrite trans 100.0 1.1E-29 2.3E-34 230.6 30.4 344 31-412 64-458 (462)
38 PRK10077 xylE D-xylose transpo 100.0 3.5E-30 7.6E-35 243.5 28.4 369 37-416 58-465 (479)
39 PF07690 MFS_1: Major Facilita 100.0 8E-31 1.7E-35 238.1 22.9 312 40-373 38-352 (352)
40 TIGR00897 2A0118 polyol permea 100.0 1.3E-29 2.9E-34 233.4 30.8 349 30-406 41-399 (402)
41 TIGR00883 2A0106 metabolite-pr 100.0 4.2E-30 9E-35 237.0 27.1 316 49-393 50-386 (394)
42 PRK10504 putative transporter; 100.0 1.3E-29 2.9E-34 238.8 30.2 326 46-383 57-416 (471)
43 PRK15402 multidrug efflux syst 100.0 2E-29 4.4E-34 233.0 30.6 312 45-387 59-375 (406)
44 PRK05122 major facilitator sup 100.0 2.4E-29 5.3E-34 232.0 29.4 325 42-409 59-390 (399)
45 PRK15403 multidrug efflux syst 100.0 6.1E-29 1.3E-33 229.1 31.3 338 29-397 43-386 (413)
46 PRK11195 lysophospholipid tran 100.0 2.1E-29 4.5E-34 230.8 27.8 342 37-411 41-383 (393)
47 PRK11010 ampG muropeptide tran 100.0 1.8E-28 3.9E-33 230.2 33.2 347 33-407 43-402 (491)
48 PRK11646 multidrug resistance 100.0 1.1E-28 2.3E-33 226.7 30.3 337 30-403 39-383 (400)
49 TIGR00899 2A0120 sugar efflux 100.0 2.5E-28 5.4E-33 223.7 29.8 338 30-404 26-370 (375)
50 PRK11043 putative transporter; 100.0 2.7E-28 5.9E-33 225.1 30.0 309 40-382 47-357 (401)
51 TIGR00710 efflux_Bcr_CflA drug 100.0 4.1E-28 9E-33 223.0 31.1 323 29-381 32-360 (385)
52 PRK03893 putative sialic acid 100.0 5E-29 1.1E-33 236.6 25.6 342 43-395 64-440 (496)
53 PRK12382 putative transporter; 100.0 2.8E-28 6E-33 224.4 28.7 334 30-406 44-387 (392)
54 PRK03633 putative MFS family t 100.0 5.4E-28 1.2E-32 221.3 30.1 316 42-400 49-364 (381)
55 PRK09874 drug efflux system pr 100.0 4.1E-28 8.8E-33 224.8 28.4 329 46-409 66-399 (408)
56 PRK10473 multidrug efflux syst 100.0 1E-27 2.2E-32 220.7 30.4 300 46-383 50-350 (392)
57 KOG0569 Permease of the major 100.0 6.3E-28 1.4E-32 217.9 28.2 365 41-416 67-462 (485)
58 PRK11102 bicyclomycin/multidru 100.0 2E-27 4.3E-32 217.8 31.3 307 42-377 34-344 (377)
59 cd06174 MFS The Major Facilita 100.0 2.3E-27 5E-32 215.2 30.3 309 40-404 40-348 (352)
60 PRK11652 emrD multidrug resist 100.0 5.1E-27 1.1E-31 216.1 32.1 309 41-382 50-360 (394)
61 PRK10133 L-fucose transporter; 100.0 4.9E-27 1.1E-31 217.5 31.9 334 29-395 53-420 (438)
62 KOG2533 Permease of the major 100.0 1.3E-28 2.8E-33 225.6 20.8 353 31-390 78-438 (495)
63 TIGR00896 CynX cyanate transpo 100.0 2.1E-27 4.6E-32 215.5 27.8 311 40-388 41-354 (355)
64 PRK15011 sugar efflux transpor 100.0 1.4E-26 3E-31 212.7 33.3 336 29-403 43-386 (393)
65 TIGR00895 2A0115 benzoate tran 100.0 1.4E-27 3E-32 220.6 26.7 325 43-379 61-397 (398)
66 PRK06814 acylglycerophosphoeth 100.0 1.3E-27 2.7E-32 248.0 29.4 330 42-396 60-410 (1140)
67 PRK10054 putative transporter; 100.0 7.4E-28 1.6E-32 220.8 24.4 350 31-419 37-392 (395)
68 TIGR00902 2A0127 phenyl propri 100.0 1.2E-26 2.6E-31 212.3 30.6 333 29-400 31-371 (382)
69 PRK11902 ampG muropeptide tran 100.0 7.6E-27 1.7E-31 215.2 29.2 331 48-410 46-392 (402)
70 KOG2504 Monocarboxylate transp 100.0 1.2E-26 2.7E-31 214.9 28.1 347 51-408 98-476 (509)
71 PRK11128 putative 3-phenylprop 100.0 5.5E-26 1.2E-30 208.0 30.4 329 30-397 32-368 (382)
72 KOG1330 Sugar transporter/spin 100.0 4.2E-29 9.2E-34 217.6 9.1 340 36-387 70-417 (493)
73 TIGR00886 2A0108 nitrite extru 100.0 1.3E-26 2.9E-31 211.5 25.3 321 29-369 29-366 (366)
74 PF05977 MFS_3: Transmembrane 100.0 5.5E-26 1.2E-30 211.6 29.0 334 43-405 54-391 (524)
75 TIGR00885 fucP L-fucose:H+ sym 100.0 8E-26 1.7E-30 207.6 29.5 333 29-395 30-399 (410)
76 TIGR00889 2A0110 nucleoside tr 100.0 1.9E-25 4.1E-30 206.0 29.1 349 30-414 31-408 (418)
77 COG2807 CynX Cyanate permease 100.0 1.8E-25 3.9E-30 189.3 26.1 340 29-406 39-383 (395)
78 PRK08633 2-acyl-glycerophospho 99.9 2.5E-25 5.4E-30 231.8 28.8 317 41-381 54-383 (1146)
79 KOG3764 Vesicular amine transp 99.9 1.9E-26 4.2E-31 196.7 15.9 343 33-408 102-454 (464)
80 TIGR00901 2A0125 AmpG-related 99.9 1.3E-24 2.7E-29 197.5 28.7 287 51-366 38-355 (356)
81 KOG2615 Permease of the major 99.9 8.9E-25 1.9E-29 185.5 25.3 347 37-400 71-432 (451)
82 TIGR00805 oat sodium-independe 99.9 8.3E-26 1.8E-30 216.8 20.4 252 35-287 69-397 (633)
83 PRK09528 lacY galactoside perm 99.9 5.6E-25 1.2E-29 204.1 22.4 339 44-410 56-405 (420)
84 PRK10207 dipeptide/tripeptide 99.9 2.4E-23 5.1E-28 194.7 33.1 354 50-409 66-477 (489)
85 TIGR00924 yjdL_sub1_fam amino 99.9 1.6E-23 3.5E-28 195.8 31.7 360 46-409 60-469 (475)
86 KOG0253 Synaptic vesicle trans 99.9 1.6E-23 3.5E-28 176.8 25.7 354 46-415 125-526 (528)
87 TIGR00882 2A0105 oligosacchari 99.9 1.2E-23 2.5E-28 193.8 26.8 333 44-404 48-391 (396)
88 KOG0255 Synaptic vesicle trans 99.9 4.8E-23 1E-27 196.3 31.0 358 40-416 124-500 (521)
89 KOG0254 Predicted transporter 99.9 1.6E-23 3.4E-28 198.5 26.0 368 37-417 92-492 (513)
90 TIGR02718 sider_RhtX_FptX side 99.9 7.8E-23 1.7E-27 187.9 29.8 340 29-400 28-383 (390)
91 TIGR00792 gph sugar (Glycoside 99.9 1.6E-22 3.4E-27 189.1 28.7 324 30-383 28-381 (437)
92 COG0738 FucP Fucose permease [ 99.9 2.7E-22 5.8E-27 172.8 26.6 323 29-386 40-388 (422)
93 PF00083 Sugar_tr: Sugar (and 99.9 1.9E-29 4.2E-34 236.5 -19.0 365 40-418 52-446 (451)
94 TIGR01272 gluP glucose/galacto 99.9 2.7E-22 5.9E-27 176.9 26.4 275 85-392 7-299 (310)
95 PF06609 TRI12: Fungal trichot 99.9 6.5E-22 1.4E-26 183.7 28.0 343 29-381 71-466 (599)
96 PF11700 ATG22: Vacuole efflux 99.9 2.6E-20 5.6E-25 172.0 33.1 334 53-406 89-466 (477)
97 KOG0252 Inorganic phosphate tr 99.9 1.7E-22 3.6E-27 176.0 14.0 368 37-417 87-506 (538)
98 PF03825 Nuc_H_symport: Nucleo 99.9 4.8E-20 1E-24 167.1 29.9 308 46-384 49-366 (400)
99 PRK09584 tppB putative tripept 99.9 4.1E-20 8.9E-25 174.0 28.9 347 51-406 74-477 (500)
100 TIGR00806 rfc RFC reduced fola 99.9 5.8E-21 1.3E-25 170.4 20.8 333 29-372 53-405 (511)
101 KOG4686 Predicted sugar transp 99.9 1.6E-21 3.4E-26 159.1 12.6 319 42-388 87-420 (459)
102 PTZ00207 hypothetical protein; 99.9 4.1E-19 8.9E-24 166.3 27.7 372 29-407 54-551 (591)
103 TIGR01301 GPH_sucrose GPH fami 99.9 1.1E-18 2.3E-23 160.2 27.4 362 31-413 33-476 (477)
104 TIGR00788 fbt folate/biopterin 99.8 7E-19 1.5E-23 164.2 24.3 330 51-395 77-430 (468)
105 PRK09669 putative symporter Ya 99.8 1E-17 2.3E-22 156.5 28.4 323 29-383 37-389 (444)
106 COG2270 Permeases of the major 99.8 1.3E-17 2.7E-22 145.2 25.0 328 51-402 75-423 (438)
107 PF01306 LacY_symp: LacY proto 99.8 1.9E-17 4.1E-22 147.4 26.0 359 32-418 38-410 (412)
108 PRK15462 dipeptide/tripeptide 99.8 1.9E-16 4E-21 146.2 31.4 341 32-379 40-437 (493)
109 PF13347 MFS_2: MFS/sugar tran 99.8 2.9E-17 6.3E-22 152.7 24.9 323 30-383 30-385 (428)
110 PF03209 PUCC: PUCC protein; 99.8 1.9E-15 4.2E-20 132.1 31.1 268 91-382 92-363 (403)
111 PRK10429 melibiose:sodium symp 99.8 3.3E-16 7.2E-21 147.3 28.1 326 30-383 35-394 (473)
112 PRK09848 glucuronide transport 99.8 2.6E-16 5.7E-21 147.3 26.6 323 29-383 36-389 (448)
113 PRK11462 putative transporter; 99.8 1.4E-15 3.1E-20 142.0 28.6 321 30-383 38-388 (460)
114 KOG2563 Permease of the major 99.8 1.2E-16 2.7E-21 139.8 19.6 341 49-413 94-455 (480)
115 COG2211 MelB Na+/melibiose sym 99.7 5.7E-14 1.2E-18 126.6 28.3 294 63-384 82-398 (467)
116 COG3104 PTR2 Dipeptide/tripept 99.7 4.2E-14 9.1E-19 126.3 26.4 356 50-408 77-487 (498)
117 KOG3626 Organic anion transpor 99.7 2.5E-15 5.4E-20 141.0 17.1 232 56-287 154-459 (735)
118 PF03137 OATP: Organic Anion T 99.6 1.8E-17 4E-22 155.3 -0.2 323 58-383 62-515 (539)
119 KOG2816 Predicted transporter 99.6 2.5E-13 5.3E-18 124.5 21.3 316 44-382 72-392 (463)
120 PRK10054 putative transporter; 99.6 1E-13 2.2E-18 127.5 17.6 177 220-408 6-182 (395)
121 PRK15462 dipeptide/tripeptide 99.5 8.4E-13 1.8E-17 122.2 17.0 173 220-402 8-183 (493)
122 TIGR00880 2_A_01_02 Multidrug 99.5 3.3E-13 7.1E-18 104.9 12.2 129 45-174 9-137 (141)
123 TIGR00924 yjdL_sub1_fam amino 99.5 9.6E-13 2.1E-17 123.5 17.1 170 221-401 10-185 (475)
124 PF07690 MFS_1: Major Facilita 99.5 1.1E-12 2.5E-17 118.9 17.1 165 228-403 3-167 (352)
125 PRK11646 multidrug resistance 99.5 1.5E-12 3.3E-17 119.9 17.3 174 224-409 13-186 (400)
126 PRK09584 tppB putative tripept 99.5 3.1E-12 6.7E-17 120.8 18.1 176 216-401 15-194 (500)
127 KOG2325 Predicted transporter/ 99.5 2.2E-12 4.8E-17 116.7 16.0 345 44-409 81-476 (488)
128 PF03092 BT1: BT1 family; Int 99.5 3.3E-12 7.1E-17 117.9 16.9 308 63-384 58-382 (433)
129 PRK10207 dipeptide/tripeptide 99.5 4.2E-12 9.2E-17 119.2 17.7 166 220-395 13-181 (489)
130 PRK11663 regulatory protein Uh 99.4 2.9E-12 6.2E-17 119.5 15.5 177 221-409 23-199 (434)
131 PRK10489 enterobactin exporter 99.4 1.9E-12 4.1E-17 120.3 14.1 179 214-403 10-192 (417)
132 PRK10504 putative transporter; 99.4 1.1E-11 2.3E-16 117.2 18.4 178 220-409 9-186 (471)
133 TIGR00711 efflux_EmrB drug res 99.4 1.2E-11 2.6E-16 117.5 18.5 175 225-411 6-180 (485)
134 COG2814 AraJ Arabinose efflux 99.4 1.8E-11 3.8E-16 108.4 17.9 178 220-409 12-189 (394)
135 TIGR00710 efflux_Bcr_CflA drug 99.4 8.4E-12 1.8E-16 114.8 16.7 175 225-411 9-183 (385)
136 PRK14995 methyl viologen resis 99.4 2E-11 4.4E-16 115.7 19.3 177 223-411 8-185 (495)
137 TIGR00900 2A0121 H+ Antiporter 99.4 7.3E-12 1.6E-16 114.2 15.3 170 226-405 4-176 (365)
138 TIGR02332 HpaX 4-hydroxyphenyl 99.4 2.1E-11 4.6E-16 112.8 18.4 177 224-411 11-192 (412)
139 PRK03545 putative arabinose tr 99.4 1.6E-11 3.5E-16 113.0 17.5 175 223-409 11-185 (390)
140 TIGR00886 2A0108 nitrite extru 99.4 1.9E-11 4.1E-16 111.6 17.8 173 222-404 2-184 (366)
141 PRK09528 lacY galactoside perm 99.4 6.6E-12 1.4E-16 116.8 14.5 183 216-408 5-191 (420)
142 PRK10091 MFS transport protein 99.4 1.7E-11 3.8E-16 112.4 17.0 178 221-410 3-180 (382)
143 PRK10213 nepI ribonucleoside t 99.4 2.8E-11 6.1E-16 111.3 18.1 155 236-402 35-189 (394)
144 PRK03699 putative transporter; 99.4 4.2E-11 9.1E-16 110.3 19.3 172 221-403 7-178 (394)
145 PRK10473 multidrug efflux syst 99.4 3.1E-11 6.7E-16 111.3 18.4 180 221-412 3-182 (392)
146 PRK05122 major facilitator sup 99.4 1.4E-11 3E-16 113.9 16.1 165 220-393 14-184 (399)
147 TIGR00899 2A0120 sugar efflux 99.4 1.6E-11 3.5E-16 112.5 16.3 173 228-410 4-178 (375)
148 PRK12382 putative transporter; 99.4 2.4E-11 5.3E-16 112.0 17.0 160 220-389 14-180 (392)
149 COG2271 UhpC Sugar phosphate p 99.4 3.8E-12 8.3E-17 111.3 10.3 174 225-410 33-208 (448)
150 PRK11043 putative transporter; 99.4 3E-11 6.5E-16 111.7 17.0 168 229-407 11-180 (401)
151 TIGR00897 2A0118 polyol permea 99.4 4.1E-11 9E-16 110.7 17.4 155 220-384 12-170 (402)
152 PRK09874 drug efflux system pr 99.4 5E-11 1.1E-15 110.6 17.9 178 220-410 13-195 (408)
153 TIGR00903 2A0129 major facilit 99.4 3.8E-11 8.3E-16 108.9 16.5 164 235-411 5-168 (368)
154 TIGR00895 2A0115 benzoate tran 99.4 3.3E-11 7E-16 111.3 16.5 170 229-410 25-194 (398)
155 PRK03633 putative MFS family t 99.3 9.4E-11 2E-15 107.5 19.1 152 220-382 5-156 (381)
156 TIGR00712 glpT glycerol-3-phos 99.3 1.3E-11 2.8E-16 115.3 13.2 180 220-410 26-208 (438)
157 PRK11652 emrD multidrug resist 99.3 5.6E-11 1.2E-15 109.6 17.1 177 223-411 10-186 (394)
158 PLN00028 nitrate transmembrane 99.3 9.4E-11 2E-15 110.5 18.0 162 235-408 50-219 (476)
159 PRK15011 sugar efflux transpor 99.3 1.2E-10 2.6E-15 107.3 18.0 181 220-411 14-197 (393)
160 TIGR00893 2A0114 d-galactonate 99.3 2.3E-11 4.9E-16 112.3 13.3 160 238-409 11-170 (399)
161 PRK15034 nitrate/nitrite trans 99.3 1E-10 2.2E-15 107.2 17.1 150 220-379 33-186 (462)
162 PRK11551 putative 3-hydroxyphe 99.3 9.1E-11 2E-15 108.7 17.1 174 225-410 19-192 (406)
163 PRK11195 lysophospholipid tran 99.3 4E-11 8.7E-16 110.2 14.4 158 220-393 2-159 (393)
164 PRK11102 bicyclomycin/multidru 99.3 5.2E-11 1.1E-15 109.2 15.1 162 237-410 7-168 (377)
165 TIGR00889 2A0110 nucleoside tr 99.3 2.8E-11 6E-16 112.1 13.1 130 49-178 266-406 (418)
166 TIGR00882 2A0105 oligosacchari 99.3 5.3E-11 1.1E-15 109.8 14.8 176 220-406 1-181 (396)
167 TIGR00891 2A0112 putative sial 99.3 9.6E-11 2.1E-15 108.5 16.5 164 221-395 12-176 (405)
168 PRK15403 multidrug efflux syst 99.3 2.1E-10 4.6E-15 106.2 18.4 160 240-411 35-194 (413)
169 PRK15402 multidrug efflux syst 99.3 1.9E-10 4.1E-15 106.6 18.1 163 237-411 29-191 (406)
170 TIGR00885 fucP L-fucose:H+ sym 99.3 2E-10 4.4E-15 105.9 18.2 149 223-381 5-155 (410)
171 PRK11273 glpT sn-glycerol-3-ph 99.3 8.4E-11 1.8E-15 110.3 15.9 157 241-409 49-209 (452)
172 PF01770 Folate_carrier: Reduc 99.3 3.6E-09 7.9E-14 94.3 24.4 307 51-367 58-387 (412)
173 PF05977 MFS_3: Transmembrane 99.3 1.2E-10 2.5E-15 109.5 15.5 179 216-404 5-186 (524)
174 TIGR01299 synapt_SV2 synaptic 99.3 1.5E-10 3.2E-15 112.7 16.2 131 241-382 187-317 (742)
175 PF05631 DUF791: Protein of un 99.3 3E-09 6.6E-14 92.2 21.8 230 30-283 62-304 (354)
176 PRK03893 putative sialic acid 99.3 2.6E-10 5.7E-15 108.6 17.1 160 222-393 21-180 (496)
177 PRK10642 proline/glycine betai 99.2 1.3E-10 2.7E-15 110.2 14.1 134 49-182 301-437 (490)
178 TIGR00881 2A0104 phosphoglycer 99.2 4.6E-11 1E-15 109.5 10.9 167 231-409 5-172 (379)
179 PRK12307 putative sialic acid 99.2 2.3E-10 4.9E-15 106.8 15.5 161 222-394 19-179 (426)
180 PRK09705 cynX putative cyanate 99.2 4.7E-10 1E-14 103.3 17.0 147 238-396 26-172 (393)
181 PRK11902 ampG muropeptide tran 99.2 5.4E-10 1.2E-14 103.3 17.4 165 228-402 6-176 (402)
182 TIGR00890 2A0111 Oxalate/Forma 99.2 1.3E-10 2.9E-15 106.3 13.3 161 236-409 18-178 (377)
183 PRK10133 L-fucose transporter; 99.2 1.3E-09 2.9E-14 101.4 19.2 149 222-380 27-177 (438)
184 TIGR00892 2A0113 monocarboxyla 99.2 4.4E-10 9.5E-15 105.4 15.8 154 240-406 38-192 (455)
185 KOG1330 Sugar transporter/spin 99.2 3.6E-11 7.9E-16 106.3 7.7 182 222-414 34-215 (493)
186 PRK11010 ampG muropeptide tran 99.2 1.3E-09 2.8E-14 103.0 18.6 179 217-405 8-192 (491)
187 TIGR00902 2A0127 phenyl propri 99.2 6.6E-10 1.4E-14 101.9 15.9 160 224-395 7-166 (382)
188 TIGR00894 2A0114euk Na(+)-depe 99.2 7.7E-10 1.7E-14 104.4 16.7 149 251-408 70-219 (465)
189 PF02487 CLN3: CLN3 protein; 99.2 1.8E-08 3.9E-13 89.9 23.8 311 51-379 76-394 (402)
190 KOG3098 Uncharacterized conser 99.2 7.3E-09 1.6E-13 94.0 21.7 313 41-379 57-411 (461)
191 cd06174 MFS The Major Facilita 99.2 4.4E-10 9.6E-15 101.8 13.7 166 226-403 4-169 (352)
192 PRK09556 uhpT sugar phosphate 99.2 3.8E-10 8.3E-15 106.4 13.3 158 240-407 48-211 (467)
193 PF06963 FPN1: Ferroportin1 (F 99.2 6.8E-08 1.5E-12 87.9 26.8 251 118-375 143-411 (432)
194 PRK06814 acylglycerophosphoeth 99.2 9.4E-10 2E-14 115.3 17.1 167 216-392 6-179 (1140)
195 COG2223 NarK Nitrate/nitrite t 99.1 1.3E-09 2.8E-14 95.8 14.3 178 221-409 14-194 (417)
196 PRK11128 putative 3-phenylprop 99.1 1.4E-09 3E-14 99.9 15.3 159 229-399 12-170 (382)
197 PRK08633 2-acyl-glycerophospho 99.1 1.7E-09 3.7E-14 113.7 17.8 158 216-382 4-165 (1146)
198 PF01306 LacY_symp: LacY proto 99.1 4.7E-10 1E-14 100.5 10.2 177 218-406 4-186 (412)
199 TIGR00879 SP MFS transporter, 99.1 1.2E-09 2.6E-14 103.5 13.7 135 256-400 70-209 (481)
200 TIGR00901 2A0125 AmpG-related 99.1 2.5E-09 5.5E-14 97.2 15.0 165 240-410 7-180 (356)
201 KOG3764 Vesicular amine transp 99.1 6.4E-10 1.4E-14 96.5 9.6 152 253-415 102-254 (464)
202 TIGR00806 rfc RFC reduced fola 99.1 7E-09 1.5E-13 93.9 16.5 155 241-408 45-203 (511)
203 TIGR00792 gph sugar (Glycoside 99.1 1.6E-09 3.4E-14 101.5 13.1 175 233-411 11-197 (437)
204 TIGR01301 GPH_sucrose GPH fami 99.1 6.5E-09 1.4E-13 96.2 16.5 182 222-412 5-222 (477)
205 TIGR00880 2_A_01_02 Multidrug 99.1 1.6E-09 3.5E-14 84.0 10.1 134 264-408 5-138 (141)
206 COG3104 PTR2 Dipeptide/tripept 99.0 4.5E-09 9.7E-14 94.6 12.7 185 216-409 15-207 (498)
207 TIGR00896 CynX cyanate transpo 99.0 5.2E-09 1.1E-13 95.1 13.1 143 240-395 19-162 (355)
208 PRK10077 xylE D-xylose transpo 99.0 5.9E-09 1.3E-13 98.9 13.5 148 253-410 51-216 (479)
209 COG0738 FucP Fucose permease [ 99.0 3.2E-08 7E-13 86.6 16.5 161 235-404 26-206 (422)
210 TIGR02718 sider_RhtX_FptX side 99.0 1.6E-08 3.4E-13 93.2 15.8 177 224-409 4-185 (390)
211 KOG2615 Permease of the major 99.0 2.8E-09 6.1E-14 92.0 9.4 125 254-390 65-193 (451)
212 PF06609 TRI12: Fungal trichot 99.0 3.5E-08 7.7E-13 92.9 17.4 178 217-408 36-217 (599)
213 PRK10406 alpha-ketoglutarate t 99.0 5E-08 1.1E-12 91.1 18.1 159 230-398 31-209 (432)
214 TIGR00887 2A0109 phosphate:H+ 99.0 3.2E-08 7E-13 94.2 16.9 118 254-380 53-175 (502)
215 PTZ00207 hypothetical protein; 98.9 5.7E-08 1.2E-12 92.0 17.8 162 235-410 41-207 (591)
216 TIGR00805 oat sodium-independe 98.9 4.4E-09 9.4E-14 102.0 10.0 140 234-382 45-234 (633)
217 PRK09669 putative symporter Ya 98.9 2.8E-08 6.1E-13 93.1 13.3 153 226-382 14-172 (444)
218 PRK09952 shikimate transporter 98.9 1.2E-07 2.7E-12 88.5 17.1 163 224-396 25-208 (438)
219 TIGR00898 2A0119 cation transp 98.8 2.4E-08 5.3E-13 95.3 11.5 129 48-179 369-499 (505)
220 PRK10429 melibiose:sodium symp 98.8 8.2E-08 1.8E-12 90.7 14.1 149 225-381 10-168 (473)
221 KOG2532 Permease of the major 98.8 6.5E-08 1.4E-12 89.6 12.8 151 250-409 66-217 (466)
222 PRK11462 putative transporter; 98.8 2E-07 4.3E-12 87.5 15.9 156 225-384 13-174 (460)
223 PRK15075 citrate-proton sympor 98.8 2.6E-07 5.6E-12 86.4 16.3 160 223-393 17-197 (434)
224 TIGR00788 fbt folate/biopterin 98.8 1.8E-07 3.8E-12 88.0 15.0 183 220-411 25-211 (468)
225 PF11700 ATG22: Vacuole efflux 98.8 1.1E-07 2.4E-12 88.6 13.0 135 44-179 327-472 (477)
226 PF03825 Nuc_H_symport: Nucleo 98.8 4.4E-07 9.5E-12 82.9 16.3 139 225-375 6-144 (400)
227 KOG3810 Micronutrient transpor 98.7 9.5E-08 2.1E-12 81.6 10.5 309 51-369 58-375 (433)
228 TIGR00769 AAA ADP/ATP carrier 98.7 4.9E-05 1.1E-09 70.4 29.0 225 52-286 62-332 (472)
229 PF13347 MFS_2: MFS/sugar tran 98.7 3.8E-08 8.2E-13 91.8 8.3 172 231-410 11-200 (428)
230 COG2270 Permeases of the major 98.7 2.3E-07 5E-12 82.0 11.1 143 34-177 288-431 (438)
231 TIGR00883 2A0106 metabolite-pr 98.7 5.7E-07 1.2E-11 82.9 14.4 121 268-397 46-180 (394)
232 KOG4332 Predicted sugar transp 98.6 1.2E-06 2.7E-11 72.3 13.8 298 35-365 70-389 (454)
233 PRK09848 glucuronide transport 98.6 8.5E-07 1.8E-11 83.3 14.5 139 224-366 11-156 (448)
234 COG2211 MelB Na+/melibiose sym 98.6 1.8E-06 3.9E-11 78.7 14.8 158 223-384 14-177 (467)
235 KOG2533 Permease of the major 98.6 2.4E-06 5.1E-11 79.6 15.9 152 250-411 74-230 (495)
236 PF05631 DUF791: Protein of un 98.6 2.5E-05 5.5E-10 68.3 20.3 153 251-414 63-222 (354)
237 TIGR00926 2A1704 Peptide:H+ sy 98.6 3.8E-05 8.3E-10 74.5 23.6 121 51-172 40-179 (654)
238 PF00854 PTR2: POT family; In 98.5 3.5E-06 7.5E-11 77.0 14.9 109 65-173 2-121 (372)
239 KOG3574 Acetyl-CoA transporter 98.5 2.1E-05 4.6E-10 68.5 17.1 311 51-383 80-432 (510)
240 KOG2504 Monocarboxylate transp 98.5 1.1E-06 2.3E-11 82.7 10.0 175 224-409 45-222 (509)
241 KOG3762 Predicted transporter 98.4 3.6E-06 7.8E-11 76.6 12.1 178 216-405 366-544 (618)
242 PF06813 Nodulin-like: Nodulin 98.4 9.8E-06 2.1E-10 68.2 13.5 137 234-382 15-157 (250)
243 KOG0253 Synaptic vesicle trans 98.4 7.3E-07 1.6E-11 77.1 6.4 123 50-179 397-523 (528)
244 KOG0637 Sucrose transporter an 98.4 7.5E-06 1.6E-10 73.1 12.8 329 61-402 98-490 (498)
245 KOG0254 Predicted transporter 98.4 1.2E-05 2.6E-10 76.9 15.2 135 258-403 90-225 (513)
246 KOG0569 Permease of the major 98.4 1.1E-05 2.5E-10 74.3 14.1 137 260-403 63-200 (485)
247 KOG0255 Synaptic vesicle trans 98.3 4E-06 8.7E-11 80.4 11.4 140 250-403 111-250 (521)
248 KOG2325 Predicted transporter/ 98.3 6.2E-06 1.3E-10 75.5 11.8 185 221-413 34-234 (488)
249 PF06813 Nodulin-like: Nodulin 98.3 0.00026 5.6E-09 59.8 19.4 128 51-179 53-186 (250)
250 COG2807 CynX Cyanate permease 98.3 3.1E-05 6.6E-10 67.4 13.9 150 240-402 31-180 (395)
251 PF07672 MFS_Mycoplasma: Mycop 98.2 0.00016 3.5E-09 60.1 16.9 99 120-232 2-105 (267)
252 PF12832 MFS_1_like: MFS_1 lik 98.2 1.3E-05 2.9E-10 53.9 7.9 61 226-287 5-65 (77)
253 TIGR00926 2A1704 Peptide:H+ sy 98.2 4.9E-05 1.1E-09 73.7 14.7 162 236-405 2-179 (654)
254 COG0477 ProP Permeases of the 98.2 2.4E-05 5.2E-10 69.3 11.5 122 44-166 49-176 (338)
255 PF03092 BT1: BT1 family; Int 98.1 9.5E-05 2.1E-09 68.8 15.4 161 244-410 12-177 (433)
256 KOG3762 Predicted transporter 98.1 4.5E-06 9.7E-11 76.0 5.8 121 51-172 423-544 (618)
257 TIGR01272 gluP glucose/galacto 98.1 3E-05 6.6E-10 68.7 11.0 119 41-163 185-303 (310)
258 PF03219 TLC: TLC ATP/ADP tran 98.1 0.0033 7.2E-08 58.8 24.4 168 109-286 165-348 (491)
259 PF05978 UNC-93: Ion channel r 98.1 3.8E-05 8.1E-10 59.6 9.5 99 47-147 50-148 (156)
260 KOG3880 Predicted small molecu 98.1 0.0001 2.3E-09 62.4 12.1 310 51-378 79-400 (409)
261 PF03209 PUCC: PUCC protein; 98.0 0.00011 2.4E-09 65.5 12.1 131 248-383 6-152 (403)
262 PF13000 Acatn: Acetyl-coenzym 98.0 0.0035 7.5E-08 57.4 21.0 278 100-382 130-467 (544)
263 KOG2816 Predicted transporter 98.0 0.00021 4.6E-09 66.3 13.8 136 266-415 71-206 (463)
264 KOG2563 Permease of the major 97.9 0.00046 9.9E-09 62.0 13.3 129 245-383 68-203 (480)
265 TIGR00939 2a57 Equilibrative N 97.7 0.0074 1.6E-07 56.0 19.2 57 319-375 371-427 (437)
266 KOG0252 Inorganic phosphate tr 97.7 3.1E-05 6.7E-10 69.4 2.9 129 50-182 364-505 (538)
267 PF00083 Sugar_tr: Sugar (and 97.6 3.2E-06 7E-11 79.6 -3.7 134 258-400 47-184 (451)
268 KOG1237 H+/oligopeptide sympor 97.6 0.024 5.3E-07 54.4 21.9 119 51-169 90-239 (571)
269 KOG4686 Predicted sugar transp 97.5 0.0013 2.8E-08 55.4 10.0 131 40-173 303-441 (459)
270 PF01770 Folate_carrier: Reduc 97.1 0.033 7.2E-07 50.6 15.2 159 239-408 21-182 (412)
271 PF05978 UNC-93: Ion channel r 97.0 0.086 1.9E-06 41.1 15.2 108 263-381 43-150 (156)
272 PRK03612 spermidine synthase; 97.0 0.043 9.3E-07 52.3 16.0 166 228-401 21-190 (521)
273 PF06963 FPN1: Ferroportin1 (F 96.9 0.08 1.7E-06 48.9 16.7 176 222-403 3-195 (432)
274 KOG1479 Nucleoside transporter 96.9 0.036 7.8E-07 49.9 13.6 269 88-379 117-401 (406)
275 KOG0637 Sucrose transporter an 96.5 0.0081 1.7E-07 54.4 7.0 152 221-377 32-200 (498)
276 COG0477 ProP Permeases of the 96.5 0.11 2.5E-06 45.5 14.6 134 239-382 20-158 (338)
277 PF03137 OATP: Organic Anion T 96.4 0.00056 1.2E-08 65.2 -1.1 166 235-409 16-251 (539)
278 PF06779 DUF1228: Protein of u 96.3 0.035 7.6E-07 37.9 7.5 50 235-285 6-55 (85)
279 TIGR00769 AAA ADP/ATP carrier 96.3 0.36 7.8E-06 45.3 16.4 150 220-381 6-190 (472)
280 PF00854 PTR2: POT family; In 96.0 0.045 9.7E-07 50.1 9.4 86 321-407 34-122 (372)
281 KOG3626 Organic anion transpor 95.8 0.032 6.9E-07 54.2 7.4 163 239-410 114-345 (735)
282 COG3202 ATP/ADP translocase [E 95.0 3 6.6E-05 38.8 27.6 225 52-285 80-350 (509)
283 KOG4332 Predicted sugar transp 94.8 0.25 5.4E-06 41.8 8.6 158 247-415 62-227 (454)
284 PF02487 CLN3: CLN3 protein; 94.7 0.16 3.4E-06 46.2 7.9 64 85-148 332-395 (402)
285 PF01733 Nucleoside_tran: Nucl 93.9 0.017 3.7E-07 51.2 0.2 56 321-376 249-304 (309)
286 KOG3574 Acetyl-CoA transporter 93.6 0.97 2.1E-05 40.5 10.2 145 221-376 31-189 (510)
287 KOG1237 H+/oligopeptide sympor 93.0 4.8 0.0001 39.1 14.9 174 223-405 39-242 (571)
288 KOG1479 Nucleoside transporter 91.8 9.6 0.00021 34.9 14.3 63 221-285 18-80 (406)
289 KOG3098 Uncharacterized conser 88.9 12 0.00027 35.0 12.8 111 259-380 51-162 (461)
290 PRK03612 spermidine synthase; 87.9 13 0.00027 35.9 12.7 70 92-162 114-184 (521)
291 KOG3880 Predicted small molecu 87.4 3 6.5E-05 36.4 7.2 77 70-147 325-401 (409)
292 KOG2601 Iron transporter [Inor 87.0 5.1 0.00011 36.0 8.5 41 333-373 399-439 (503)
293 KOG3097 Predicted membrane pro 87.0 22 0.00047 31.6 13.1 66 50-117 74-139 (390)
294 PF06779 DUF1228: Protein of u 85.7 2.1 4.5E-05 29.3 4.5 56 35-91 28-83 (85)
295 PF07857 DUF1632: CEO family ( 85.5 22 0.00048 30.3 13.2 24 228-251 185-208 (254)
296 KOG2601 Iron transporter [Inor 84.7 26 0.00056 31.8 11.6 69 221-289 27-95 (503)
297 PF02990 EMP70: Endomembrane p 81.5 25 0.00054 33.9 11.5 24 265-288 305-328 (521)
298 PF05255 UPF0220: Uncharacteri 80.1 24 0.00052 27.9 9.0 63 115-177 13-81 (166)
299 PF01925 TauE: Sulfite exporte 77.3 43 0.00093 28.2 10.8 24 264-287 200-223 (240)
300 COG5336 Uncharacterized protei 71.0 15 0.00033 26.1 5.0 35 351-385 37-71 (116)
301 KOG4830 Predicted sugar transp 68.9 4.7 0.0001 34.2 2.7 155 212-374 192-349 (412)
302 PF03596 Cad: Cadmium resistan 67.3 67 0.0014 26.1 9.0 10 240-249 113-122 (191)
303 COG4262 Predicted spermidine s 67.2 98 0.0021 28.0 12.9 125 252-380 38-163 (508)
304 COG5336 Uncharacterized protei 66.7 26 0.00056 25.0 5.5 19 267-285 52-70 (116)
305 TIGR00939 2a57 Equilibrative N 61.7 1.4E+02 0.0031 28.0 12.7 26 328-354 114-139 (437)
306 PF13000 Acatn: Acetyl-coenzym 56.9 61 0.0013 30.8 7.7 63 225-287 4-70 (544)
307 PRK13629 threonine/serine tran 55.5 1.8E+02 0.004 27.3 16.7 43 118-165 18-60 (443)
308 PF11151 DUF2929: Protein of u 54.0 52 0.0011 20.5 5.4 46 133-178 11-56 (57)
309 PF06912 DUF1275: Protein of u 50.5 1.4E+02 0.0031 24.5 10.4 34 120-153 158-191 (209)
310 PF11947 DUF3464: Protein of u 49.8 1.2E+02 0.0026 23.6 7.1 28 344-371 118-145 (153)
311 PRK00293 dipZ thiol:disulfide 49.7 2.7E+02 0.0058 27.4 17.7 31 255-285 323-353 (571)
312 PF12805 FUSC-like: FUSC-like 48.9 82 0.0018 27.6 7.2 35 68-102 3-37 (284)
313 PF01733 Nucleoside_tran: Nucl 47.1 7.2 0.00016 34.6 0.3 60 86-145 246-305 (309)
314 PF12832 MFS_1_like: MFS_1 lik 45.2 70 0.0015 21.4 4.8 35 354-388 33-67 (77)
315 PF03219 TLC: TLC ATP/ADP tran 44.5 3E+02 0.0064 26.5 22.2 34 253-286 172-205 (491)
316 PF07672 MFS_Mycoplasma: Mycop 42.4 2.1E+02 0.0045 24.7 8.1 74 62-138 170-253 (267)
317 KOG2881 Predicted membrane pro 41.8 2.3E+02 0.0049 24.4 9.2 17 220-236 206-222 (294)
318 COG2095 MarC Multiple antibiot 39.6 2.2E+02 0.0047 23.5 9.8 67 110-176 27-94 (203)
319 PF00909 Ammonium_transp: Ammo 38.9 3.3E+02 0.007 25.3 14.5 34 120-153 107-140 (399)
320 KOG3097 Predicted membrane pro 38.5 2.8E+02 0.0061 25.1 8.5 60 221-287 29-88 (390)
321 PF03616 Glt_symporter: Sodium 38.4 3.2E+02 0.0069 25.1 15.2 25 267-291 250-274 (368)
322 PRK10621 hypothetical protein; 38.4 2.6E+02 0.0057 24.1 14.6 29 133-161 83-111 (266)
323 PRK15015 carbon starvation pro 38.1 4.2E+02 0.0092 26.4 13.3 57 93-154 56-114 (701)
324 TIGR01667 YCCS_YHJK integral m 37.3 2.1E+02 0.0047 28.9 8.7 56 47-102 37-95 (701)
325 PF01914 MarC: MarC family int 35.0 2.6E+02 0.0056 23.0 10.7 55 112-166 26-81 (203)
326 TIGR01666 YCCS hypothetical me 34.5 2.7E+02 0.0059 28.2 8.9 55 48-102 38-95 (704)
327 PF02990 EMP70: Endomembrane p 34.4 1.1E+02 0.0023 29.7 6.1 34 254-287 290-323 (521)
328 PTZ00370 STEVOR; Provisional 33.3 48 0.001 28.6 3.1 40 138-177 242-281 (296)
329 PRK10263 DNA translocase FtsK; 31.1 5.7E+02 0.012 28.1 10.7 21 265-285 60-80 (1355)
330 PF02694 UPF0060: Uncharacteri 31.0 94 0.002 22.3 3.7 31 257-287 54-84 (107)
331 PF01810 LysE: LysE type trans 30.9 2.8E+02 0.0061 22.2 14.5 18 269-286 145-162 (191)
332 COG0814 SdaC Amino acid permea 29.5 4.8E+02 0.01 24.4 15.1 26 119-144 9-34 (415)
333 COG1457 CodB Purine-cytosine p 28.7 5.1E+02 0.011 24.5 21.7 67 217-285 90-156 (442)
334 TIGR01478 STEVOR variant surfa 28.6 32 0.00069 29.5 1.3 21 399-419 273-293 (295)
335 TIGR02230 ATPase_gene1 F0F1-AT 28.4 2.2E+02 0.0048 20.3 6.2 34 130-163 49-86 (100)
336 KOG1278 Endosomal membrane pro 28.2 3.2E+02 0.007 26.5 7.6 32 254-285 356-387 (628)
337 PF11368 DUF3169: Protein of u 28.2 3.8E+02 0.0082 22.9 10.2 25 123-147 9-33 (248)
338 PF03741 TerC: Integral membra 27.2 3.4E+02 0.0073 21.9 16.4 58 104-163 12-69 (183)
339 PRK02237 hypothetical protein; 26.1 1.7E+02 0.0037 21.1 4.3 31 257-287 56-86 (109)
340 PF12273 RCR: Chitin synthesis 25.8 31 0.00067 26.0 0.7 14 154-167 1-14 (130)
341 PF11299 DUF3100: Protein of u 25.0 2.1E+02 0.0046 24.1 5.3 55 92-147 175-229 (241)
342 KOG3810 Micronutrient transpor 24.9 1.3E+02 0.0028 27.4 4.3 84 48-132 285-370 (433)
343 PRK15049 L-asparagine permease 24.8 6.3E+02 0.014 24.3 10.9 20 152-171 446-465 (499)
344 KOG1277 Endosomal membrane pro 22.9 2.2E+02 0.0047 26.8 5.4 26 262-287 328-357 (593)
345 PTZ00370 STEVOR; Provisional 22.7 31 0.00068 29.6 0.3 34 384-418 255-288 (296)
346 PF11299 DUF3100: Protein of u 22.3 1.7E+02 0.0037 24.6 4.3 45 330-375 181-225 (241)
347 PRK10263 DNA translocase FtsK; 22.3 1.1E+03 0.024 26.2 11.3 20 267-286 141-160 (1355)
348 PF07857 DUF1632: CEO family ( 22.3 5.1E+02 0.011 22.3 8.7 24 354-377 77-100 (254)
349 KOG0055 Multidrug/pheromone ex 22.0 1.1E+03 0.023 25.9 11.4 49 235-283 903-951 (1228)
350 PF13940 Ldr_toxin: Toxin Ldr, 22.0 1.3E+02 0.0029 16.2 2.4 20 264-283 15-34 (35)
351 TIGR00814 stp serine transport 22.0 6.5E+02 0.014 23.4 16.0 26 118-143 2-27 (397)
352 PF01102 Glycophorin_A: Glycop 22.0 61 0.0013 24.1 1.6 11 403-413 84-94 (122)
353 COG1983 PspC Putative stress-r 21.6 2.5E+02 0.0054 18.5 4.1 33 147-179 21-65 (70)
354 PRK10995 inner membrane protei 21.0 5E+02 0.011 21.7 7.6 58 345-402 31-88 (221)
355 PRK11111 hypothetical protein; 20.8 4.8E+02 0.01 21.8 6.7 89 108-196 28-116 (214)
356 PF13386 DsbD_2: Cytochrome C 20.7 4.7E+02 0.01 21.3 13.3 35 253-287 146-180 (199)
357 PF11947 DUF3464: Protein of u 20.3 4.3E+02 0.0092 20.7 6.5 27 261-287 100-126 (153)
No 1
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2e-38 Score=272.99 Aligned_cols=368 Identities=16% Similarity=0.172 Sum_probs=289.8
Q ss_pred ccccchhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHh
Q 014698 36 IGRRGRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIAR 115 (420)
Q Consensus 36 ~g~~~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~ 115 (420)
+|-.++.+...+.++-.+.+.+.||..+|+.+..++++.++..+++++ +++.+.+.++-++.|..+|..+|.+...+++
T Consensus 66 lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gf-s~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~ 144 (448)
T COG2271 66 LGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGF-SPSLFLFAVLWVLNGWFQGMGWPPCARTITH 144 (448)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 455555666666777899999999999999999999999999999997 8899999999999999999999999999999
Q ss_pred cCCccccchhhHHHHhhhhhHHHHHHhhH--HHhhhccchhHHHHHHHHHHHHHHH-HhhhcccCcccCCCCcCccchhh
Q 014698 116 SIPLEERSRAVSFVFGGLSFGSVAGLLLA--PPIIENLGWESVFYIFGLLGIAWFS-GFKILQEGETSNGATLAPRSNYI 192 (420)
Q Consensus 116 ~~~~~~r~~~~~~~~~~~~~g~~~g~~l~--~~l~~~~gwr~~f~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 192 (420)
|+|++|||+..++.+.+.++|..+.|++. +++..+++||..|++.++++++..+ .++..+++|+...-.+.++..
T Consensus 145 Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~-- 222 (448)
T COG2271 145 WFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYR-- 222 (448)
T ss_pred HcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhh--
Confidence 99999999999999999999999999999 8898888999999999999988654 444555544432211111100
Q ss_pred hhhhhhhhhhhhhc-ccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHH
Q 014698 193 NMKKSLSASLEEMG-ESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASV 271 (420)
Q Consensus 193 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 271 (420)
+++.+..++.+|.+ -...+.-.+.+++||.+|.+.+..++.+..-+++..|.|.|+.|..|+|..++++..+.+..+++
T Consensus 223 ~d~~e~~~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl 302 (448)
T COG2271 223 GDPLEIYEEEKENEGLTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGL 302 (448)
T ss_pred cCchhhhhhhccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhh
Confidence 00000000000000 01112234568899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCc-HHHHHHHHHHHHHhhhhhhhhhhhhhhccC
Q 014698 272 LVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLP-HWEIVGILTAGLALSSFALSGLYCTHQDIS 350 (420)
Q Consensus 272 ~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 350 (420)
+|+++.|+++||+.+.| |.....+.++...+++......++.+ ....+.++++|+...+.....-....+..|
T Consensus 303 ~G~Ll~GwlSDklfkgr------R~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~p 376 (448)
T COG2271 303 PGTLLAGWLSDKLFKGR------RGPMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVP 376 (448)
T ss_pred HHHHHHHHHHHHhcccc------cchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhcccc
Confidence 99999999999997543 56666666776777777776666543 344455567777766556555555667788
Q ss_pred ccchHHHHHHHHHhhhh-hHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhccCCCC
Q 014698 351 PEYASILLGITNTVGAV-PGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSKP 413 (420)
Q Consensus 351 ~~~~g~~~g~~~~~~~~-g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (420)
++..|++.|+...+.++ |.+.+....|++.|.. +|...|++..+.++++.++.....+.+++
T Consensus 377 K~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~-gW~g~Fi~~~~~a~l~~lll~~~~~~~~~ 439 (448)
T COG2271 377 KKAAGTATGFVGLFAYLIGAALAGLPLGYIADTW-GWDGGFIVLSIAALLAILLLLPVWNAEER 439 (448)
T ss_pred HhhccchhchhhhHHHHhhHHhcCCcceeeEecC-CCcchHHHHHHHHHHHHHHHHHHHhhcch
Confidence 89999999999999999 9999999999999995 89989998888777777766666554444
No 2
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-36 Score=266.05 Aligned_cols=350 Identities=19% Similarity=0.249 Sum_probs=275.7
Q ss_pred hhhhhhhccccccchhhhhHHhHHhhhhcch---hhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccc
Q 014698 27 GLKKWVGLRIGRRGRIYLKDTNLLELLRLPL---LFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEG 103 (420)
Q Consensus 27 ~i~~~l~~~~g~~~~l~~~~~~~~~l~~~p~---~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 103 (420)
++.++++.+.+..+.+.+.+....++.++++ .+|.+|||+++..+.++.++.+++++ ++||+.++++|++.|+..|
T Consensus 38 ~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~al-Ap~f~~Ll~aR~~~g~a~G 116 (394)
T COG2814 38 PIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSAL-APSFAVLLLARALAGLAHG 116 (394)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHH
Confidence 4478888888888877776666655555555 78899999999999999999999986 9999999999999999999
Q ss_pred cchhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHH-HHhhhcccCcccCC
Q 014698 104 VSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWF-SGFKILQEGETSNG 182 (420)
Q Consensus 104 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~-~~~~~~~~~~~~~~ 182 (420)
..++...++..|..|++||++++++...+.+++.++|.+++.++.+.+|||..|++.+..+++.. ..+..+| |++.+
T Consensus 117 ~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP--~~~~~ 194 (394)
T COG2814 117 VFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP--PSEIS 194 (394)
T ss_pred HHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC--CccCC
Confidence 99999999999999999999999999999999999999999999999999999999999998854 5666677 11111
Q ss_pred CCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHH
Q 014698 183 ATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWV 262 (420)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 262 (420)
++... +..+..+++|+|+++...+..++...+.+...+|+..+++|..|+|....++.
T Consensus 195 ~~~~~----------------------~~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~ 252 (394)
T COG2814 195 GSLPG----------------------PLRTLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLV 252 (394)
T ss_pred CCCCc----------------------chhHHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHH
Confidence 11100 00113578999999999999999999999999999999999999999999999
Q ss_pred HHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhh
Q 014698 263 SILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGL 342 (420)
Q Consensus 263 ~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 342 (420)
...++++.++|+.++|++.|| +. ++..... ....+..+..+....++........+++|+..........
T Consensus 253 Ll~~Gv~~~~Gn~~gGrl~dr-~~--------~~~l~~~-~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~ 322 (394)
T COG2814 253 LLAFGIAGFIGNLLGGRLADR-GP--------RRALIAA-LLLLALALLALTFTGASPALALALLFLWGFAFSPALQGLQ 322 (394)
T ss_pred HHHHHHHHHHHHHHHhhhccc-cc--------hhHHHHH-HHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHH
Confidence 999999999999999999999 53 3333333 2333333333334444444444445555665553333333
Q ss_pred hhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhccCCCC
Q 014698 343 YCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSKP 413 (420)
Q Consensus 343 ~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (420)
....+ ..||.+..+.+++....++|..+|..++|.++|+. ++....++.+...+++..+.+...+++++
T Consensus 323 ~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~-g~~~~~~~~a~l~~~a~~~~~~~~~~~~~ 391 (394)
T COG2814 323 TRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDAL-GYAATGWVGAALLLLALLLALLSARKDRR 391 (394)
T ss_pred HHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-chHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 33333 55799999999999999999999999999999994 88888888777776666666555544443
No 3
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.7e-36 Score=275.44 Aligned_cols=368 Identities=32% Similarity=0.509 Sum_probs=300.0
Q ss_pred HHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhh-chHHHHHHHHHHHHhccccchhhhHHHHHhcCCccccch
Q 014698 46 DTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLA-GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSR 124 (420)
Q Consensus 46 ~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~ 124 (420)
++.++++..+++.+|+|.|+++..+.++.++++++.+..+ .+++.+++.|++||++.|..+|+...+.++|.|++||++
T Consensus 85 G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~~Ers~ 164 (466)
T KOG2532|consen 85 GYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVLFPAIGSILAKWAPPNERST 164 (466)
T ss_pred HHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHHHhhhhceeeeECCHHHHHH
Confidence 3334566667779999999999999999999999988633 345678999999999999999999999999999999999
Q ss_pred hhHHHHhhhhhHHHHHHhhHHHhhhc-cchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhhhhhhhhhhh
Q 014698 125 AVSFVFGGLSFGSVAGLLLAPPIIEN-LGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLE 203 (420)
Q Consensus 125 ~~~~~~~~~~~g~~~g~~l~~~l~~~-~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (420)
..++..++..+|.+++.+++|++.+. +||+.+|++.++.+++..++++++..|+|.+++.-.++|.+.-.+ ...+
T Consensus 165 ~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h~~is~~El~~I~~----~k~~ 240 (466)
T KOG2532|consen 165 FIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKHPNISEKELKYIEK----GKSE 240 (466)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCHHHHHHHHh----cccc
Confidence 99999999999999999999999998 999999999999999988888877777666544433332211111 1111
Q ss_pred hhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhh
Q 014698 204 EMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADN 283 (420)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr 283 (420)
+..++.++.|++++++++.+|...+..++.+++.+.+..+.|.|+++++|+|..+.|++.++..+...+..+++|.++||
T Consensus 241 ~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~ 320 (466)
T KOG2532|consen 241 AHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDR 320 (466)
T ss_pred cccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11222267899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHH
Q 014698 284 LIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNT 363 (420)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 363 (420)
+.+|.......||....++....++++...........+..+.++....+..+...........+..|++.+..+|+.+.
T Consensus 321 l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~apq~a~~l~g~~~~ 400 (466)
T KOG2532|consen 321 LTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKNHQDIAPQHAGFVMGIINF 400 (466)
T ss_pred HhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhhhhhccchHHHHHHHHHHH
Confidence 98876667777999999998888888887776655444455555555666666666666666666588999999999999
Q ss_pred hhhhhHHHHHHHHHHHhcc--CCceeeeehhhhHHHHHHHHHHhhhccCCCCCCCCC
Q 014698 364 VGAVPGIVGVALTGYLLDS--THSWSMSLFAPSIFFYLTGTIVWLAFASSKPQNFST 418 (420)
Q Consensus 364 ~~~~g~~~~~~~~g~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (420)
...+.+.++|.+.|.+... ..+|+..|++.+++.++.. +.+.++-+.++++|++
T Consensus 401 ~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~-i~f~~f~s~e~~~w~~ 456 (466)
T KOG2532|consen 401 VGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGN-IIFLFFGSGEPAPWTK 456 (466)
T ss_pred HHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhc-hheeEeecCcccCccC
Confidence 9999999999999999942 2478999999887666555 4555555666666654
No 4
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=2.9e-35 Score=276.06 Aligned_cols=367 Identities=12% Similarity=0.043 Sum_probs=251.6
Q ss_pred hhhhhccccccchh---hhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHh----hchHHHHHHHHHHHHhc
Q 014698 29 KKWVGLRIGRRGRI---YLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLL----AGFMPGLVLSRVLVGIG 101 (420)
Q Consensus 29 ~~~l~~~~g~~~~l---~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~r~l~G~~ 101 (420)
.++++.+..+.+.+ +...+.+++++.+++.||+++||++..+.+++++.....+.. +++++.+++.|+++|++
T Consensus 56 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 135 (467)
T PRK09556 56 ISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMIALWALSGFF 135 (467)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHH
Confidence 44555444344433 344445567888888999999999999888888777766542 58899999999999999
Q ss_pred cccchhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhcc---chhHHHHHHHHHHHHHHHHhhhc-ccC
Q 014698 102 EGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL---GWESVFYIFGLLGIAWFSGFKIL-QEG 177 (420)
Q Consensus 102 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~---gwr~~f~~~~~~~~~~~~~~~~~-~~~ 177 (420)
.+...|...++++||+|+++|++++|+...+.++|.++++.+..++.+.. +||..|.+.+++.++..+..+++ +++
T Consensus 136 ~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~ 215 (467)
T PRK09556 136 QSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDS 215 (467)
T ss_pred HhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999999999999999999999987776653 69999998888877654444444 444
Q ss_pred cccCCCCcCccchhhhhhhhhhhhhhhhcccccccc--hhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCC
Q 014698 178 ETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVP--WKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLN 255 (420)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 255 (420)
|++.+ ..++++ ...+..+..+...+ .++....+ .++.+|+|.+|...+..++.....++...|.|.|+++.+|+|
T Consensus 216 p~~~~-~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s 292 (467)
T PRK09556 216 PEELG-WGKAEE-IFGEPISEEDKETE-STDMTKWQIFVEYVLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFS 292 (467)
T ss_pred hhhcC-CCChhh-cccCccchhhhccc-cccCcHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCC
Confidence 32211 111110 00000000000000 00000001 123788999999999988888888888899999999989999
Q ss_pred cchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhh
Q 014698 256 LTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALS 335 (420)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 335 (420)
..+++...+...++.+++.++.|+++||+++| +................... ..++.....+..+..|.+..
T Consensus 293 ~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r-------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~G~~~~ 364 (467)
T PRK09556 293 KEDAINTFTLFEIGALVGSLLWGWLSDLANGR-------RALVACIALALIIFTLGVYQ-HATSEYMYLASLFALGFLVF 364 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-------chHHHHHHHHHHHHHHHHHH-hcCcHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999976 22222111111111111111 12223233344455554332
Q ss_pred hhhhhhhhhhhhccCccchHHHHHHHHHhhhh-hHHHHHHHHHHHhc------------cCCceeeeehhhhHHHHHHHH
Q 014698 336 SFALSGLYCTHQDISPEYASILLGITNTVGAV-PGIVGVALTGYLLD------------STHSWSMSLFAPSIFFYLTGT 402 (420)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-g~~~~~~~~g~l~~------------~~~~~~~~~~~~~~~~~~~~~ 402 (420)
...........+..|++++|++.|+.+...++ |++++|.+.|.+.| .. +|+..|.+..++.+++.+
T Consensus 365 ~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~-~~~~~f~~~~~~~~~~~~ 443 (467)
T PRK09556 365 GPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLT-GWAGTFAALDIAAIGCIC 443 (467)
T ss_pred hHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhccccccccccccccc-ChHHHHHHHHHHHHHHHH
Confidence 22222223445778899999999999999997 77999999999999 33 588888887666666555
Q ss_pred HHhhh
Q 014698 403 IVWLA 407 (420)
Q Consensus 403 ~~~~~ 407 (420)
..+..
T Consensus 444 ~~~~~ 448 (467)
T PRK09556 444 LMAIV 448 (467)
T ss_pred HHHHH
Confidence 54443
No 5
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=100.00 E-value=1.3e-34 Score=272.17 Aligned_cols=370 Identities=24% Similarity=0.362 Sum_probs=262.1
Q ss_pred hhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHh-hchHHHHHHHHHHHHhccccchhhhHHHHHhcCCccc
Q 014698 43 YLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLL-AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEE 121 (420)
Q Consensus 43 ~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~ 121 (420)
+.....++++..+++.||+++|+++..+.++++++++++.+. .++++.+++.|+++|++.+...|....+++|++|+++
T Consensus 85 ~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~ 164 (465)
T TIGR00894 85 HFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKE 164 (465)
T ss_pred HHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHH
Confidence 334455567778888999999999999999999988876531 3567889999999999999999999999999999999
Q ss_pred cchhhHHHHhhhhhHHHHHHhhHHHhhhcc-chhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhhhhhhhh
Q 014698 122 RSRAVSFVFGGLSFGSVAGLLLAPPIIENL-GWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSA 200 (420)
Q Consensus 122 r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (420)
|++++++...+..+|.+++|++++.+.+.+ |||+.|++.++.+++..+.++.+++++|+++++..+++.+. ..+
T Consensus 165 r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-----i~~ 239 (465)
T TIGR00894 165 RSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPCISKFEKKY-----INS 239 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCCCCCHHHHHH-----HHh
Confidence 999999999999999999999999999884 99999999999888776666665554443222211111100 000
Q ss_pred hh-hhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhh
Q 014698 201 SL-EEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQ 279 (420)
Q Consensus 201 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~ 279 (420)
.. ++..+..++.++++++++|.+|...+..++.....+.+..|+|.|+++.+|++..+.++..+...++..++.++.|+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~ 319 (465)
T TIGR00894 240 SLQGQKGSTRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGY 319 (465)
T ss_pred hcccccCCCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHH
Confidence 00 01111123446889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhcCcchHHH-HHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHH
Q 014698 280 FADNLIATGVETTMV-RKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILL 358 (420)
Q Consensus 280 l~dr~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~ 358 (420)
++||+++|+...... ++.....+................+.......+.+.+.+.+ ...........+..|+.+|.+.
T Consensus 320 l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~g~~~ 398 (465)
T TIGR00894 320 LADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSS-GPLAGVLINSLDLAPRFLGFIK 398 (465)
T ss_pred HHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhh-hhhhhhhhchhhcChhHHHHHH
Confidence 999998765432221 22222222222222222222212222222222333333333 2222333334455667999999
Q ss_pred HHHHHhhhhhHHHHHHHHHHHhccC--CceeeeehhhhHHHHHHHHHHhhhccCCCCCCCCCC
Q 014698 359 GITNTVGAVPGIVGVALTGYLLDST--HSWSMSLFAPSIFFYLTGTIVWLAFASSKPQNFSTR 419 (420)
Q Consensus 359 g~~~~~~~~g~~~~~~~~g~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (420)
|+.+....+++.++|.+.|.+.|.. ++|...|.+.++..+++.++. ....+.++++|+++
T Consensus 399 g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~-~~~~~~~~~~w~~~ 460 (465)
T TIGR00894 399 GITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFY-LIFGSAERQDWAKE 460 (465)
T ss_pred HHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHe-eeeecceecCCCCC
Confidence 9999999999999999999988753 457777777766555554443 34555666666544
No 6
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=6.1e-34 Score=268.39 Aligned_cols=346 Identities=16% Similarity=0.103 Sum_probs=235.3
Q ss_pred HHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHH--------HHHHHHHHHhccccchhhhHHHHHhcC
Q 014698 46 DTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPG--------LVLSRVLVGIGEGVSPSAATDLIARSI 117 (420)
Q Consensus 46 ~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--------l~~~r~l~G~~~~~~~~~~~~~i~~~~ 117 (420)
...+++++.+++.||+||||++..+.++++++++++++ ++|++. ++++|+++|++.|..++...++++|++
T Consensus 69 ~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~-~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~ 147 (490)
T PRK10642 69 IRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGL-IPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYS 147 (490)
T ss_pred HHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHh-cccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhC
Confidence 34567999999999999999999999999999999986 888764 899999999999999999999999999
Q ss_pred CccccchhhHHHHhhhhhHHHHHHhhHHHhh--------hccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccc
Q 014698 118 PLEERSRAVSFVFGGLSFGSVAGLLLAPPII--------ENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRS 189 (420)
Q Consensus 118 ~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~--------~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (420)
|+++|+++.++...+..+|..+|+.+...+. +.+|||+.|++.++++++..+....+||+++..+.+++.++
T Consensus 148 p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~~~~~~~esp~~~~~~~~~~~ 227 (490)
T PRK10642 148 PDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVDKLEQ 227 (490)
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHhhhh
Confidence 9999999999999988889888887665443 25799999999877666555555667776553211100000
Q ss_pred hhhhhhhhhhhhhhhhcccccccchhhhhhc-HHHHH-HHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhH
Q 014698 190 NYINMKKSLSASLEEMGESLKDVPWKAIFRS-KAVWA-MIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPP 267 (420)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 267 (420)
.. ++..++.++.++++++++ ++.+. .....++....++....+.|.|+++.+|++..+.+.......
T Consensus 228 ~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~ 296 (490)
T PRK10642 228 GD-----------REGLQDGPKVSFKEIATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIM 296 (490)
T ss_pred hc-----------cccccccccCCHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 00 000011123345566653 23222 233334456677888889999998888998888887777888
Q ss_pred HHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHH-hhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhh
Q 014698 268 LASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLS-SIDLGLPHWEIVGILTAGLALSSFALSGLYCTH 346 (420)
Q Consensus 268 ~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 346 (420)
++.+++.++.|+++||+||| +................. ....++........++.+++.+...........
T Consensus 297 ~~~~~~~~~~g~l~dr~grr--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~ 368 (490)
T PRK10642 297 IGMLFVQPVMGLLSDRFGRR--------PFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLP 368 (490)
T ss_pred HHHHHHHHHHHHHHHHhccH--------HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999974 222222221121111111 112222233333344445544434344444555
Q ss_pred hccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhccCCC
Q 014698 347 QDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSK 412 (420)
Q Consensus 347 ~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (420)
+.+|++.|+++.|+.+....+++.++|.+.+++.+..+++..+++...+..+++.+..++ .+|++
T Consensus 369 ~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~-~pes~ 433 (490)
T PRK10642 369 AMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVT-MKETA 433 (490)
T ss_pred HHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHH-hcccc
Confidence 678999999999987777778889999999999887555554444444444444444333 34443
No 7
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=4.8e-34 Score=261.78 Aligned_cols=354 Identities=14% Similarity=0.107 Sum_probs=264.4
Q ss_pred hhhhhhccccccchhhh---hHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhcccc
Q 014698 28 LKKWVGLRIGRRGRIYL---KDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGV 104 (420)
Q Consensus 28 i~~~l~~~~g~~~~l~~---~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~ 104 (420)
+.++++.+....+.+.+ ....++++..+++.||+||||++..+..+++++.+.+++ ++|++.+++.|+++|++.+.
T Consensus 35 i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~-a~~~~~ll~~r~l~Gig~~~ 113 (393)
T PRK09705 35 LRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMREL-YPQSALLLSSALLGGVGIGI 113 (393)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHH-CcchHHHHHHHHHHHhHHHH
Confidence 35556555544444444 444556788888899999999999999999999999986 99999999999999999999
Q ss_pred chhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhcc-chhHHHHHHHHHHHHHHHHhhhcccCcccCCC
Q 014698 105 SPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL-GWESVFYIFGLLGIAWFSGFKILQEGETSNGA 183 (420)
Q Consensus 105 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (420)
..+....++.|++| ++|+++++.+..+...|..+|+.+++++.++. +||..+.+.++..++.....+...++++++++
T Consensus 114 ~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (393)
T PRK09705 114 IQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALFAWWWQSAREVASSH 192 (393)
T ss_pred HhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcccc
Confidence 99999999999997 88999999999999999999999999988875 89999887766655443333333222211110
Q ss_pred CcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHH
Q 014698 184 TLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVS 263 (420)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 263 (420)
+ + + .+.++.+++|+.+...+..++....++....+.|.|+++ +|.+..+++...
T Consensus 193 ~--~-------------------~----~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~ 246 (393)
T PRK09705 193 K--T-------------------T----TTPVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLL 246 (393)
T ss_pred C--C-------------------C----cCCcccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHH
Confidence 0 0 0 011345567888877777777778888889999999987 699999999999
Q ss_pred HhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhh
Q 014698 264 ILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLY 343 (420)
Q Consensus 264 ~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 343 (420)
+..+++.++++++.+++.||+++| +.. ..+..............+.+.... ...+.|++.+...+....
T Consensus 247 ~~~~i~~i~g~~~~g~l~~r~~~~-------~~~--~~~~~l~~~~~~~~~~~~~~~~~~--~~~l~g~g~g~~~~~~~~ 315 (393)
T PRK09705 247 ALMTLGQAAGALLMPAMARHQDRR-------KLL--MLALVLQLVGFCGFIWLPLQLPVL--WAMVCGLGLGGAFPLCLL 315 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhhccch-------HHH--HHHHHHHHHHHHHHHHccchHHHH--HHHHHHHhccchHHHHHH
Confidence 999999999999999999999864 222 222222222222222112222222 223456666655555544
Q ss_pred hhhhccC-ccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhccCCCCCCCCCCC
Q 014698 344 CTHQDIS-PEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSKPQNFSTRD 420 (420)
Q Consensus 344 ~~~~~~~-~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (420)
...+..+ ++++++..|+.+...++++.++|.+.|++.|..|++...|.+.+++++......+...+|++++++.||.
T Consensus 316 ~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (393)
T PRK09705 316 LALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPARFPQLWVKEA 393 (393)
T ss_pred HHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccccchhcccC
Confidence 5556664 5789999999999999999999999999999998899888888877777777777788888888877663
No 8
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=4.1e-34 Score=265.71 Aligned_cols=363 Identities=13% Similarity=0.097 Sum_probs=252.3
Q ss_pred hhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCccc
Q 014698 42 IYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEE 121 (420)
Q Consensus 42 l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~ 121 (420)
.+.....+++++.+++.||+++|+++.++.++.+++.++.+. +++++.+++.|++.|++.+...+...+++.|++|+++
T Consensus 66 ~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~ 144 (434)
T PRK11663 66 LFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGF-SSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTE 144 (434)
T ss_pred HHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHH
Confidence 333445556888888899999999999999999999998886 8999999999999999999999999999999999999
Q ss_pred cchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHH-HHHhhhcccCcccCCCCcCccchhhhhhhhhhh
Q 014698 122 RSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAW-FSGFKILQEGETSNGATLAPRSNYINMKKSLSA 200 (420)
Q Consensus 122 r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (420)
|++++++.+.+.++|..++|.+++.+.+.+|||+.|++.++..++. ....++++|++++......++++.. .++..+
T Consensus 145 rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~--~~~~~~ 222 (434)
T PRK11663 145 RGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRHD--ALELAQ 222 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCccccccc--ccccch
Confidence 9999999999999999999999999999999999999988876654 3444556665543211111100000 000000
Q ss_pred hhhhhcccccccc-h-hhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhh
Q 014698 201 SLEEMGESLKDVP-W-KAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAA 278 (420)
Q Consensus 201 ~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g 278 (420)
+ +..++.+..+ + ...+++|.++...+..++..........|+|.|+++.+|++..+++...+...++..+++++.|
T Consensus 223 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g 300 (434)
T PRK11663 223 Q--QEGAGLSRKEILTKYVLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAG 300 (434)
T ss_pred h--ccccCCChhhhHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0 0000001111 1 1356788888888777777777778888999999887899999999999999999999999999
Q ss_pred hhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHH
Q 014698 279 QFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILL 358 (420)
Q Consensus 279 ~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~ 358 (420)
++.||+.+++.+. .......+........... ...+........+.+|.+.............+..|+++++++.
T Consensus 301 ~l~dr~~~~~r~~---~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~ 375 (434)
T PRK11663 301 WGSDKLFNGNRGP---MNLIFAAGILLSVGSLWLM--PFASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAAT 375 (434)
T ss_pred hhHHHhccCCccH---HHHHHHHHHHHHHHHHHHc--ccccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHH
Confidence 9999995432100 1111112222122221111 1222222222223333322211112223344557789999999
Q ss_pred HHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhccCCCCCC
Q 014698 359 GITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSKPQN 415 (420)
Q Consensus 359 g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (420)
|+.+...++|++++|.+.|++.|+. +++..|...+++.++.++..+...+++++++
T Consensus 376 g~~~~~~~~g~~~~p~~~g~l~~~~-g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (434)
T PRK11663 376 GFVGLFAYLGAALSGYPLAKVLEIW-HWTGFFVVISIAAGISALLLLPFLNAQAPRE 431 (434)
T ss_pred HHHHHHHHHHHHHhcccHHHHHHhc-ccHHHHHHHHHHHHHHHHHHHHHHhhhchhc
Confidence 9999999999999999999999987 5888888887777666665555554444443
No 9
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=3.9e-34 Score=264.12 Aligned_cols=363 Identities=21% Similarity=0.296 Sum_probs=260.8
Q ss_pred cccchhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhc
Q 014698 37 GRRGRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARS 116 (420)
Q Consensus 37 g~~~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 116 (420)
|...........++.++.+++.||++||+++..+.++..++..+.++ +++++.+++.|++.|++.+...+....++.|+
T Consensus 32 ~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~ 110 (399)
T TIGR00893 32 GYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAF-AGAYVSLYILRVLLGAAEAPFFPGIILIVASW 110 (399)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHH-HcCHHHHHHHHHHHHHHHHhhhhHHHHHHHHh
Confidence 33334444455566788888899999999999999999999998886 88999999999999999999999999999999
Q ss_pred CCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhh-cccCcccCCCCcCccchhhhhh
Q 014698 117 IPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKI-LQEGETSNGATLAPRSNYINMK 195 (420)
Q Consensus 117 ~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 195 (420)
+|+++|++.+++.+...++|..++|.+++.+.+..+||+.|++.++..++..+...+ .||++++++ ...++++....+
T Consensus 111 ~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 189 (399)
T TIGR00893 111 FPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIPDPPQKAK-WLTEEEKYIVVG 189 (399)
T ss_pred CCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhheecCCCCccc-cCCHHHHhhcch
Confidence 999999999999999999999999999999999999999999988887775544443 444433221 111111100000
Q ss_pred hhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHH
Q 014698 196 KSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTS 275 (420)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 275 (420)
+...+..++..++.++.+.++.+|+|+++...+..++..........+.|.|+++.+|.++.+.+.......++.+++.+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (399)
T TIGR00893 190 GLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMI 269 (399)
T ss_pred hhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHH
Confidence 00000001111222334567888999999999898988888999999999999998899999999999999999999999
Q ss_pred hhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchH
Q 014698 276 IAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYAS 355 (420)
Q Consensus 276 ~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g 355 (420)
+.+++.||+++|+..... ........... ...........+...........+.+.....+.......+..|+++|+
T Consensus 270 ~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 346 (399)
T TIGR00893 270 LGGRLSDLLLRRGKSLVF-ARKTAIIAGLV--LSLLMFATNYVNIPYAALALVALGFFGLGAGAIGWALISDNAPGNIAG 346 (399)
T ss_pred HHHHHHHHHhhcccchhH-HHHHHHHHHHH--HHHHHHHhccchhHHHHHHHHHHHHhchhhhhHHHHHHHhhcChhHHH
Confidence 999999999986311000 00111111111 111111111112223333333333333334556666677778999999
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHH
Q 014698 356 ILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIV 404 (420)
Q Consensus 356 ~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (420)
++.|+.+...++|+.++|.+.|.+.|..++++..+.+.+++.+++.+..
T Consensus 347 ~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 395 (399)
T TIGR00893 347 LTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSY 395 (399)
T ss_pred HHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999987658888877766655555444
No 10
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=3e-33 Score=259.97 Aligned_cols=333 Identities=12% Similarity=0.140 Sum_probs=229.0
Q ss_pred hhhhhHHh---HHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHH--------HHHHHHHHHHhccccchhhh
Q 014698 41 RIYLKDTN---LLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMP--------GLVLSRVLVGIGEGVSPSAA 109 (420)
Q Consensus 41 ~l~~~~~~---~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~ 109 (420)
..+...+. +++++.+++.||+||||++..+..+++++++++++ ++++. .+++.|+++|++.|..++..
T Consensus 67 ~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~ 145 (432)
T PRK10406 67 GVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIAC-LPGYETIGTWAPALLLLARLFQGLSVGGEYGTS 145 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhh-cCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhH
Confidence 33444444 67888999999999999999999999999999886 77653 58999999999999999999
Q ss_pred HHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhh--------hccchhHHHHHHHHHHHHHHHHhhhcccCcccC
Q 014698 110 TDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPII--------ENLGWESVFYIFGLLGIAWFSGFKILQEGETSN 181 (420)
Q Consensus 110 ~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~--------~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~ 181 (420)
.++++|++|+++|+++.++.+.+...|..+++.+...+. +.+|||++|++.++++++.......+||+++.+
T Consensus 146 ~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~~~~~~~e~~~~~ 225 (432)
T PRK10406 146 ATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALWLRRQLDETSQQE 225 (432)
T ss_pred HHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHhcCCCCchHH
Confidence 999999999999999999999888888888887765543 257999999998887776554444455543211
Q ss_pred CCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHH-hHHHHHHHhhhhhhHhhhhhCCCcchhh
Q 014698 182 GATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFC-GSWGHYTCLSWLPTYFSEELSLNLTEAA 260 (420)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 260 (420)
+++ ..+..++++++|+|+.+...+...+ ....++....|+|.|+++.+|++..+.+
T Consensus 226 ~~~-----------------------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~ 282 (432)
T PRK10406 226 TRA-----------------------LKEAGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVAS 282 (432)
T ss_pred Hhh-----------------------hcccccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHH
Confidence 000 0011246778888888776655544 3667788889999999888899988888
Q ss_pred HHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHH-hhcCCCcHHHHHHHHHHH-HHhhhhh
Q 014698 261 WVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLS-SIDLGLPHWEIVGILTAG-LALSSFA 338 (420)
Q Consensus 261 ~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g-~~~~~~~ 338 (420)
.......+...++.++.|+++||++|| + ................. .............+...+ ...+...
T Consensus 283 ~~~~i~~~~~~i~~~~~G~l~Dr~grr-------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (432)
T PRK10406 283 GIMTAALFVFMLIQPLIGALSDKIGRR-------T-SMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYT 354 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCch-------H-HHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHH
Confidence 888888888888899999999999975 2 22222222211111111 111111222222222212 2222222
Q ss_pred hhhhhhhhhccCccchHHHHHHHHHhhhh-hHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhh
Q 014698 339 LSGLYCTHQDISPEYASILLGITNTVGAV-PGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWL 406 (420)
Q Consensus 339 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (420)
........+.+|++.|+++.|+.+...+. .+...|.+.+.+ +..|.+...++..++..+++.+..++
T Consensus 355 ~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~g~~~~~~~~~~~~~~i~~~~~~~ 422 (432)
T PRK10406 355 SISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL-KSIGMETAFFWYVTLMAVVAFLVSLM 422 (432)
T ss_pred HHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH-HHhCCCcHHHHHHHHHHHHHHHHHHH
Confidence 23334456778999999999999987764 355577777754 55556665666555555554444443
No 11
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=2.5e-33 Score=257.51 Aligned_cols=342 Identities=16% Similarity=0.140 Sum_probs=255.0
Q ss_pred hhhhhccccccchhhhhH---HhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccc
Q 014698 29 KKWVGLRIGRRGRIYLKD---TNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVS 105 (420)
Q Consensus 29 ~~~l~~~~g~~~~l~~~~---~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 105 (420)
..+++.+..+.+.+...+ ..++++..+++.||+||||++..+..+..++++.+++ ++|++.+++.|+++|++.+..
T Consensus 36 ~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~r~~~G~~~~~~ 114 (390)
T PRK03545 36 AQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSAL-AWNFTVLLISRIGIAFAHAIF 114 (390)
T ss_pred HhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHH
Confidence 445555555555443333 3455677788899999999999999999999998886 999999999999999999888
Q ss_pred hhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHH-hhhcccCcccCCCC
Q 014698 106 PSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSG-FKILQEGETSNGAT 184 (420)
Q Consensus 106 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 184 (420)
.+...+++.|++|+|||++++++...+.++|..++|++++.+.+.+|||+.|++.++.+++..+. ...+||+++++ +
T Consensus 115 ~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~-~- 192 (390)
T PRK03545 115 WSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLLPSEH-S- 192 (390)
T ss_pred HHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCC-c-
Confidence 89999999999999999999999999999999999999999999999999999999887765433 33445432210 0
Q ss_pred cCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHH
Q 014698 185 LAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSI 264 (420)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 264 (420)
+ + ..+.++++|+|.++......++.....+....+.|.++++.+|.++.+.+....
T Consensus 193 --~---------~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~ 248 (390)
T PRK03545 193 --G---------S-------------LKSLPLLFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLL 248 (390)
T ss_pred --c---------h-------------HHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHH
Confidence 0 0 011356788888887766666666666666778888988888999999999999
Q ss_pred hhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhh
Q 014698 265 LPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYC 344 (420)
Q Consensus 265 ~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 344 (420)
...++.++++++.+++.||+++| ...............+... .++........++.|++.....+.....
T Consensus 249 ~~~~~~~~g~~~~g~l~dr~~~~---------~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~l~g~~~~~~~~~~~~~ 318 (390)
T PRK03545 249 LFGGAGIIGSVLFSRLGNRHPSG---------FLLIAIALLLVCLLLLLPA-ANSEWHLSVLSIFWGIAIMCIGLAMQVK 318 (390)
T ss_pred HHHHHHHHHHHHHHHHhhccchh---------HHHHHHHHHHHHHHHHHHH-hchHHHHHHHHHHHHHHHhcchHHHHHH
Confidence 99999999999999999998743 2222222222222222222 2223344445566677665444444444
Q ss_pred hhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhcc
Q 014698 345 THQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFA 409 (420)
Q Consensus 345 ~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (420)
..+ ..|++++++.|+.+...++|..+||.+.|.+.|+. +++..+...+.+.+++.+..+...+
T Consensus 319 ~~~-~~~~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
T PRK03545 319 VLK-LAPDATDVAMALFSGIFNIGIGAGALLGNQVSLHL-GLSSIGYVGAALALAALVWSILIFR 381 (390)
T ss_pred HHH-hCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ChhHHHHHHHHHHHHHHHHHHHHcc
Confidence 444 45678999999999999999999999999999997 7888888877766666655544443
No 12
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=1.3e-33 Score=260.16 Aligned_cols=355 Identities=18% Similarity=0.190 Sum_probs=244.4
Q ss_pred hhhhhccccccchhh---hhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccc
Q 014698 29 KKWVGLRIGRRGRIY---LKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVS 105 (420)
Q Consensus 29 ~~~l~~~~g~~~~l~---~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 105 (420)
.++++.+..+.+.+. .....++++..+++.||+||||++..+.+++++++.++++ ++|++.+++.|+++|++.+..
T Consensus 35 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~r~l~G~~~~~~ 113 (412)
T TIGR02332 35 GKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMF-ATGPESLYLLRILVGIAEAGF 113 (412)
T ss_pred HhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHhhH
Confidence 445544444444333 3344556777888899999999999999999999999986 999999999999999999999
Q ss_pred hhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhh------ccchhHHHHHHHHHHHHH-HHHhhhcccCc
Q 014698 106 PSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE------NLGWESVFYIFGLLGIAW-FSGFKILQEGE 178 (420)
Q Consensus 106 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~------~~gwr~~f~~~~~~~~~~-~~~~~~~~~~~ 178 (420)
.|....++.|++|+++|++++++++.+.++|.++++.+++++.+ ..|||+.|++.+++.++. .+.++++||+|
T Consensus 114 ~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p 193 (412)
T TIGR02332 114 LPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSP 193 (412)
T ss_pred HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCc
Confidence 99999999999999999999999999999999999999998864 469999999988887764 44555666665
Q ss_pred ccCCCCcCccchhhhhhh-h-hhhh---hh-h-hcccc-cccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhh
Q 014698 179 TSNGATLAPRSNYINMKK-S-LSAS---LE-E-MGESL-KDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSE 250 (420)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~-~-~~~~---~~-~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (420)
++.+.. .+++++...+. + ...+ .+ + .+++. ++..+++++ +|.+|...+..++.....+.+..|+|.++++
T Consensus 194 ~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~ 271 (412)
T TIGR02332 194 DKAKWL-DEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREIF-TPAIMLYTLAYFCLTNTLSAINIWTPQILQS 271 (412)
T ss_pred ccCCCC-CHHHHHHHHHHHHhccccccccccccccccccHHHHHHHhc-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 432110 01111000000 0 0000 00 0 00000 011233444 5788888888888888888999999999987
Q ss_pred h-hCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHH
Q 014698 251 E-LSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILT 329 (420)
Q Consensus 251 ~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (420)
. .|++..+++.......++.+++.++.|+++||+++| +..... ......+.+.+... .++.......+..
T Consensus 272 ~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r-------~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 342 (412)
T TIGR02332 272 FNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKER-------KHHTAL-PYLFAAAGWLLASA-TDHNLIQLLGIIM 342 (412)
T ss_pred cCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCcc-------HHHHHH-HHHHHHHHHHHHHh-cCCHHHHHHHHHH
Confidence 3 467888889999999999999999999999999865 322222 22222222222222 2222222222222
Q ss_pred HHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhH
Q 014698 330 AGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSI 395 (420)
Q Consensus 330 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~ 395 (420)
.+.+.............+..|+++|+++.|+.+...++|++++|.+.|.+.|..|+|+..+.+.++
T Consensus 343 ~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~ 408 (412)
T TIGR02332 343 ASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLWFVAA 408 (412)
T ss_pred HHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHH
Confidence 222221111111122234578899999999999999999999999999999998889888776544
No 13
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=3e-32 Score=245.97 Aligned_cols=342 Identities=16% Similarity=0.045 Sum_probs=233.7
Q ss_pred hhhhhhccccccch---hhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhcccc
Q 014698 28 LKKWVGLRIGRRGR---IYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGV 104 (420)
Q Consensus 28 i~~~l~~~~g~~~~---l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~ 104 (420)
+.++++.+..+.+. .+...+.++++..+++.||++||+++..+......+ .......+|++.+++.|+++|++.+.
T Consensus 17 i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~R~l~G~g~~~ 95 (368)
T TIGR00903 17 VAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAA-AGRLLDPFNYEWLLACQLLAALGQPF 95 (368)
T ss_pred HHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHH-HHHHHHhccHHHHHHHHHHHHhHhHH
Confidence 34455444444443 444455567888888999999888766555444443 33333247899999999999999886
Q ss_pred chhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHH-HHHhhhcccCcccCCC
Q 014698 105 SPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAW-FSGFKILQEGETSNGA 183 (420)
Q Consensus 105 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~-~~~~~~~~~~~~~~~~ 183 (420)
.+.....++|++|+|+|++++++.+.+.++|.++++++++++.+.+|||+.|++.++++++. .+..+++||+|+++++
T Consensus 96 -~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~~p~~~~~ 174 (368)
T TIGR00903 96 -LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAALPALPFQAAE 174 (368)
T ss_pred -HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCC
Confidence 45566777999999999999999999999999999999999999999999999988887664 4555667776543221
Q ss_pred CcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHH
Q 014698 184 TLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVS 263 (420)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 263 (420)
+ .+. + +. ..++++++|||.+|...+..++....++.+.+|+|.|+++ .|++.. .+...
T Consensus 175 ~---~~~-----~-------~~-----~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~~~~ 232 (368)
T TIGR00903 175 G---FGF-----K-------DA-----VKEFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLEDI-AGDAV 232 (368)
T ss_pred C---cch-----H-------HH-----HHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChH-HHHHH
Confidence 1 000 0 00 0125689999999999999999999999999999999976 578764 55555
Q ss_pred HhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhh
Q 014698 264 ILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLY 343 (420)
Q Consensus 264 ~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 343 (420)
....+.+.++ .++++||..|++. |+..........++.........+ .........+.+++.....+....
T Consensus 233 ~l~~~~g~~g---~~~~~d~~~r~~~-----r~~~~~~~~~~~a~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~ 303 (368)
T TIGR00903 233 ALAILAGLIG---VAVIPDRVARAGL-----RSIYIRAAALLIAAFFLALAFELN-RLALFAFIGIAGLLMLPAYAIIMD 303 (368)
T ss_pred HHHHHHHHHH---HHHhhHHhhhhhh-----HHHHHHHHHHHHHHHHHHHHHccc-cHHHHHHHHHHHHhhhhhHHHHHH
Confidence 5555555544 5788888876432 222222122222222222222222 222222333344444433344445
Q ss_pred hhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHh
Q 014698 344 CTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVW 405 (420)
Q Consensus 344 ~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (420)
...+.+|++.||++.|+.+...++++..+|.+.+.+.. +....|.+.++..+++.+...
T Consensus 304 ~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~---~~~~~f~~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 304 WIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS---SAEAYFTFLAILITIAFAIAL 362 (368)
T ss_pred HHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHH
Confidence 56677899999999999999999999999999998883 444566666666666555543
No 14
>PRK09952 shikimate transporter; Provisional
Probab=100.00 E-value=1.1e-31 Score=249.52 Aligned_cols=329 Identities=18% Similarity=0.130 Sum_probs=228.3
Q ss_pred HHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHH--------HHHHHHHHHHhccccchhhhHHHHHhcCCcc
Q 014698 49 LLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMP--------GLVLSRVLVGIGEGVSPSAATDLIARSIPLE 120 (420)
Q Consensus 49 ~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~ 120 (420)
+++++.+++.||+|||+++..+..+++++++++++ +++++ .++++|+++|++.|..++....++.|++|+|
T Consensus 79 ~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~ 157 (438)
T PRK09952 79 LGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGL-LPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKN 157 (438)
T ss_pred hHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhc-CCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCC
Confidence 55777899999999999999999999999999986 88876 5889999999999999999999999999999
Q ss_pred ccchhhHHHHhhhhhHHHHHHhhHHHhhh--------ccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhh
Q 014698 121 ERSRAVSFVFGGLSFGSVAGLLLAPPIIE--------NLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYI 192 (420)
Q Consensus 121 ~r~~~~~~~~~~~~~g~~~g~~l~~~l~~--------~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (420)
+|++..+..+.+..+|.++++.+...+.+ .+|||..|++.+++.++........||++++.+++.+.+
T Consensus 158 ~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~~l~~~~~es~~~~~~~~~~~---- 233 (438)
T PRK09952 158 KKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIALWVRNGMEESAEFEQQQHEQA---- 233 (438)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHhhcc----
Confidence 99999999999999999999887766552 579999999988776554444444455443211110000
Q ss_pred hhhhhhhhhhhhhcccccccc-hhhhhhcHHHHHHHH-HHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHH
Q 014698 193 NMKKSLSASLEEMGESLKDVP-WKAIFRSKAVWAMIY-AHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLAS 270 (420)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 270 (420)
+ ..++.+ .+.++|+|+.+.... ..++.....+....+.|.|+++.+|++...........++..
T Consensus 234 -----------~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~ 299 (438)
T PRK09952 234 -----------A---AKKRIPVIEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLS 299 (438)
T ss_pred -----------c---ccccCCHHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 0 000111 223566776666543 455556677778889999998888988876655556667777
Q ss_pred HHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHH-H-HhhcCCCcHHH-HHHHHHHHHHhhhhhhhhhhhhhh
Q 014698 271 VLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMT-L-SSIDLGLPHWE-IVGILTAGLALSSFALSGLYCTHQ 347 (420)
Q Consensus 271 ~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~ 347 (420)
+++.++.|+++||++|| + ... .+.....+... . ......+.... ....++.+++.+...........+
T Consensus 300 ~i~~~~~g~l~Dr~grr-------~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e 370 (438)
T PRK09952 300 CLTIPCFAWLADRFGRR-------R-VYI-TGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTE 370 (438)
T ss_pred HHHHHHHHHHHHHhCch-------H-HHH-HHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88889999999999975 2 222 22222222211 1 11111222222 223344455555445555566667
Q ss_pred ccCccchHHHHHHHHHhhh-hhHHHHHHHHHHHhccC-CceeeeehhhhHHHHHHHHHHh
Q 014698 348 DISPEYASILLGITNTVGA-VPGIVGVALTGYLLDST-HSWSMSLFAPSIFFYLTGTIVW 405 (420)
Q Consensus 348 ~~~~~~~g~~~g~~~~~~~-~g~~~~~~~~g~l~~~~-~~~~~~~~~~~~~~~~~~~~~~ 405 (420)
.+|++.|+++.|+.+.... +++.++|.+.+++.|.. ++|...+...+++.+++.+..+
T Consensus 371 ~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~ 430 (438)
T PRK09952 371 MFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTAL 430 (438)
T ss_pred HCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHH
Confidence 7899999999999766654 89999999999999865 3566666665555555544443
No 15
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.7e-32 Score=234.88 Aligned_cols=367 Identities=20% Similarity=0.198 Sum_probs=281.8
Q ss_pred chhhhhHHHHHH---HHhhh-----------hhhhhccccccchhhhhHHhHHhhhhcch---hhhcchhHHHHHHHHHH
Q 014698 12 RVQFRVLTVNRV---KCAGL-----------KKWVGLRIGRRGRIYLKDTNLLELLRLPL---LFVTWIRKVLQTGVLIW 74 (420)
Q Consensus 12 ~~~~~~l~~~~~---~~~~i-----------~~~l~~~~g~~~~l~~~~~~~~~l~~~p~---~~~~~~r~~~~~~~~~~ 74 (420)
+.+.+.+..+.+ ++|.+ ..+++.+.+++..+..+....++++..|. .||+|.|++...+.++.
T Consensus 10 ~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~ 89 (417)
T COG2223 10 RIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLL 89 (417)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHH
Confidence 344555555554 55544 56777788899988888889998888777 79999999999999999
Q ss_pred HHHHHHHHHhhch---HHHHHHHHHHHHhccccchhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhcc
Q 014698 75 SLATALLPLLAGF---MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL 151 (420)
Q Consensus 75 ~~~~~~~~~~~~~---~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~ 151 (420)
.+-++..++ +.+ ++++++.+++.|++ |..+....+++++|+|||++|.++|+.. ..|+|..+...++..+....
T Consensus 90 ~IP~~~~~~-a~~~~~~~~ll~~gll~G~~-GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~ 166 (417)
T COG2223 90 LIPCLGLAF-AVTYPSTWQLLVIGLLLGLA-GASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAF 166 (417)
T ss_pred HHHHHHHHH-HccCCchHHHHHHHHHHhcc-cceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHH
Confidence 999988876 544 45999999999998 6777888999999999999999999999 99999999999999999988
Q ss_pred c---hhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHH
Q 014698 152 G---WESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIY 228 (420)
Q Consensus 152 g---wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (420)
+ ||....+..+..++..+..++..+|.++.+.+.++.. ..+++.++++|+.|.+.+
T Consensus 167 g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~---------------------~~~~~~v~~~~~~W~lsl 225 (417)
T COG2223 167 GFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQL---------------------PAQLKAVFSNKDTWLLSL 225 (417)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccc---------------------hhHHHHHhcCcchHHHHH
Confidence 8 9999999888887766555555555443222211110 022567888999999999
Q ss_pred HHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHH
Q 014698 229 AHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAV 308 (420)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
.++....++.++..++|.|+++++|.++.++|.......+.+.+.++.+|+++||+|.+ |... .........
T Consensus 226 lY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~-------rv~~-~~f~~~~~~ 297 (417)
T COG2223 226 LYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGR-------RVTL-AVFVGMALA 297 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccch-------hHHH-HHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999975 3333 222222222
Q ss_pred HHHHHhhcC-----CCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccC
Q 014698 309 CMTLSSIDL-----GLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDST 383 (420)
Q Consensus 309 ~~~~~~~~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 383 (420)
...+....+ .+.......++..+.+.+.........+.. ..+++.|.+.|+...++.+|+..-|...|...|.+
T Consensus 298 ~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~-if~~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~t 376 (417)
T COG2223 298 AALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPV-IFPKETGAVTGIVGAIGGLGGFFLPLAFGVSLDLT 376 (417)
T ss_pred HHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechH-HHHhhhhHHHHHHHHhccccccchhHHHHHHHHhc
Confidence 222222211 223333333455555555444444444433 34568999999999999999999999999999999
Q ss_pred CceeeeehhhhHHHHHHHHHHhhhccCC
Q 014698 384 HSWSMSLFAPSIFFYLTGTIVWLAFASS 411 (420)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (420)
|++...|++...+.+++..+.+....++
T Consensus 377 g~~~~~f~~~~~~~~~a~v~~~~~y~r~ 404 (417)
T COG2223 377 GSYTGAFMLLLAFYLVALVLTWALYARR 404 (417)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 8899999998888888877776665554
No 16
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=6.1e-32 Score=254.95 Aligned_cols=341 Identities=16% Similarity=0.082 Sum_probs=254.6
Q ss_pred hhhhhccccc---cchhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccc
Q 014698 29 KKWVGLRIGR---RGRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVS 105 (420)
Q Consensus 29 ~~~l~~~~g~---~~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 105 (420)
..+++.+... ....+........+..+++.||++||+++..+..++.++++.+++ ++|++.++++|+++|+|.+..
T Consensus 33 ~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~-a~~~~~li~~r~l~G~g~~~~ 111 (495)
T PRK14995 33 SMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAF-SPTASWLIATRALLAIGAAMI 111 (495)
T ss_pred HHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHH
Confidence 5556554433 334444455556778888899999999999999999999999986 999999999999999999998
Q ss_pred hhhhHHHHHhcC-CccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHH-HHhhhcccCcccCCC
Q 014698 106 PSAATDLIARSI-PLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWF-SGFKILQEGETSNGA 183 (420)
Q Consensus 106 ~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~ 183 (420)
.+.....+.+++ |+++|++++++......+|..+||.+++++.+.+|||+.|++....+++.. +....+|++++++ +
T Consensus 112 ~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~-~ 190 (495)
T PRK14995 112 VPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRR-D 190 (495)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCC-C
Confidence 888888887776 678999999999999999999999999999999999999999887776654 4445566554322 2
Q ss_pred CcCccchhh--------------hhhhhh-hh-----------------hhhhhcccccccchhhhhhcHHHHHHHHHHH
Q 014698 184 TLAPRSNYI--------------NMKKSL-SA-----------------SLEEMGESLKDVPWKAIFRSKAVWAMIYAHF 231 (420)
Q Consensus 184 ~~~~~~~~~--------------~~~~~~-~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (420)
++.|..... ...+.+ .. ...|.+.+.+..+ .+++|+|.+....+..+
T Consensus 191 ~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~e~~~~~p~~~-~~lf~~~~~~~~~~~~~ 269 (495)
T PRK14995 191 QPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFIRTQLAASRPMID-MRLFTHRIILSGVVMAM 269 (495)
T ss_pred CCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcC-HHHhCCcccHHHHHHHH
Confidence 222211100 000000 00 0112222233333 46889999988888888
Q ss_pred HhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHH
Q 014698 232 CGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMT 311 (420)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (420)
+.....++...+.|.|+++.+|+++.++|....+..++..++.++.|++.||+++| + ....+.....+...
T Consensus 270 ~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~--------~-~~~~g~~~~~~~~~ 340 (495)
T PRK14995 270 TAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLR--------L-VATGGMALSALSFY 340 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch--------H-HHHHHHHHHHHHHH
Confidence 88888888888999999999999999999999999999999999999999999964 2 22333333333322
Q ss_pred HH-hhcCC-CcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhc
Q 014698 312 LS-SIDLG-LPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLD 381 (420)
Q Consensus 312 ~~-~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 381 (420)
.. ....+ +........++.|++.+....+......+..|+++++.+.++.++.+++|+.+|+.+.|.+.+
T Consensus 341 ~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 341 GLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 22222 223334456777888887777777777788899999999999999999999999999999875
No 17
>PRK10091 MFS transport protein AraJ; Provisional
Probab=100.00 E-value=2.6e-31 Score=243.22 Aligned_cols=345 Identities=14% Similarity=0.159 Sum_probs=242.2
Q ss_pred hhhhhcccccc---chhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccc
Q 014698 29 KKWVGLRIGRR---GRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVS 105 (420)
Q Consensus 29 ~~~l~~~~g~~---~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 105 (420)
.++++.+.... .........+++++.+++.||++|||++..+..+.+++.+++++ ++|++.+++.|+++|++.+..
T Consensus 30 ~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~-~~~~~~l~~~r~l~G~~~~~~ 108 (382)
T PRK10091 30 AHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTL-SSSYLMLAIGRLVSGFPHGAF 108 (382)
T ss_pred HHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHhhhHHH
Confidence 44454443333 34445556667888888899999999999999999999998886 999999999999999999988
Q ss_pred hhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHH-HHhhhcccCcccCCCC
Q 014698 106 PSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWF-SGFKILQEGETSNGAT 184 (420)
Q Consensus 106 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 184 (420)
.+....++.|++|+++|++++++...+..+|..++|++++.+.+..|||+.|++.++..++.. .....+||.+++++ +
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~~~~~-~ 187 (382)
T PRK10091 109 FGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVPDIRDEAK-G 187 (382)
T ss_pred HHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCCCCCcccc-c
Confidence 888889999999999999999999999999999999999999998999999999988776644 33445665432110 0
Q ss_pred cCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHH
Q 014698 185 LAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSI 264 (420)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 264 (420)
+. + + ..+.+|+++.+......++.....+....+.+.++++.+|+++.+.++..+
T Consensus 188 --~~----------~----~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~ 242 (382)
T PRK10091 188 --GL----------R----E---------QFHFLRSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMM 242 (382)
T ss_pred --CH----------H----H---------HHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 00 0 0 013456777776655555555555555667788888878999999999999
Q ss_pred hhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhh
Q 014698 265 LPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYC 344 (420)
Q Consensus 265 ~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 344 (420)
...++.++++++.+++.||++++ +... .+....++.........+......+..++.+.+.....++....
T Consensus 243 ~~~~~~~ig~~~~g~l~~r~~~~--------~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 313 (382)
T PRK10091 243 LVGLGMVLGNLLSGRLSGRYSPL--------RIAA-VTDFIIVLALLMLFFFGGMKTASLIFAFICCAGLFALSAPLQIL 313 (382)
T ss_pred HHHHHHHHHhHHHheeccccCch--------hHHH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 99999999999999999999864 2222 22222222222222212222333333344444444333333333
Q ss_pred hhhc-cCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhccCC
Q 014698 345 THQD-ISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASS 411 (420)
Q Consensus 345 ~~~~-~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (420)
..++ .+++.++.+. .+...++|.++||.+.|.+.|..++|+..+.+.++...+.........+++
T Consensus 314 ~~~~~~~~~~~~~~~--~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (382)
T PRK10091 314 LLQNAKGGELLGAAG--GQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLYGRYK 379 (382)
T ss_pred HHHhCCcchHHHHHH--HHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHHHhhhh
Confidence 3333 3445555543 466788999999999999999877899888887665555554444444433
No 18
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=100.00 E-value=7.1e-32 Score=252.06 Aligned_cols=354 Identities=15% Similarity=0.186 Sum_probs=239.0
Q ss_pred hhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHh---hchHHHHHHHHHHHHhccccchhhhHHHHHhcCC
Q 014698 42 IYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLL---AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIP 118 (420)
Q Consensus 42 l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~ 118 (420)
.......+++++.+++.||+++|+++..+.++.+++.+.+++. +++++.+++.|++.|++.+...+.....+.|++|
T Consensus 71 ~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~ 150 (452)
T PRK11273 71 GISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWS 150 (452)
T ss_pred HHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCC
Confidence 3344455568888888999999999999999999998877652 1367889999999999999988888889999999
Q ss_pred ccccchhhHHHHhhhhhHHH-HHHhhHHHhhhccchhHHHHHHHHHHHHH-HHHhhhcccCcccCCCCcCccchhhhhhh
Q 014698 119 LEERSRAVSFVFGGLSFGSV-AGLLLAPPIIENLGWESVFYIFGLLGIAW-FSGFKILQEGETSNGATLAPRSNYINMKK 196 (420)
Q Consensus 119 ~~~r~~~~~~~~~~~~~g~~-~g~~l~~~l~~~~gwr~~f~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (420)
+++|++++++.+.+.++|.. .+|+++..+....|||+.|++.++..++. .+..+++||++++...++.++.+ +
T Consensus 151 ~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-----~ 225 (452)
T PRK11273 151 QKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMMRDTPQSCGLPPIEEYK-----N 225 (452)
T ss_pred hHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCChhhhh-----h
Confidence 99999999999999999864 45655444444459999999988877664 45556667665432111100000 0
Q ss_pred hhhhhhhh-hccccc-ccc-hhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHH
Q 014698 197 SLSASLEE-MGESLK-DVP-WKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLV 273 (420)
Q Consensus 197 ~~~~~~~~-~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 273 (420)
+..+..++ ..++.+ +.. .+.++|+|.+|...+..++.....+....++|.|+++..|++..+++.......++.+++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g 305 (452)
T PRK11273 226 DYPDDYNEKHEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPG 305 (452)
T ss_pred ccccccccccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 00000000 000000 011 123678899999888888888888888899999999988999999998888888999999
Q ss_pred HHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcC-CCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCcc
Q 014698 274 TSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDL-GLPHWEIVGILTAGLALSSFALSGLYCTHQDISPE 352 (420)
Q Consensus 274 ~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 352 (420)
.++.|+++||+++++ |............+......... .+.....+.++..|...............+..|++
T Consensus 306 ~~~~G~l~dr~~~~r------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~ 379 (452)
T PRK11273 306 TLLCGWMSDKVFRGN------RGATGVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKK 379 (452)
T ss_pred HHHHHHHHHHHccCC------cchHHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChh
Confidence 999999999996432 11111111111112122222221 22222233334444433222222223345778999
Q ss_pred chHHHHHHHHHhhhhhHHH-HHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhh
Q 014698 353 YASILLGITNTVGAVPGIV-GVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLA 407 (420)
Q Consensus 353 ~~g~~~g~~~~~~~~g~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (420)
.+|++.|+.+...++|+.+ +|.+.|.+.|+. +++..|.+.+++++++.+.....
T Consensus 380 ~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~-g~~~~f~~~~~~~~~~~~~~~~~ 434 (452)
T PRK11273 380 AAGTAAGFTGLFGYLGGSVAASAIVGYTVDFF-GWDGGFMVMIGGSILAVILLIVV 434 (452)
T ss_pred hhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHh-cchHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998765 799999999997 58888887776666655554433
No 19
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=2e-31 Score=246.55 Aligned_cols=335 Identities=18% Similarity=0.190 Sum_probs=242.0
Q ss_pred hhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCccc
Q 014698 42 IYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEE 121 (420)
Q Consensus 42 l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~ 121 (420)
.......++.++.+++.||++|||++..+..+..++.+.+.+ +++++.+++.|++.|++.+...+...+++.|++|+++
T Consensus 58 ~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~ 136 (406)
T PRK11551 58 AGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQ-AWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRL 136 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHH
Confidence 333444556888888999999999999999999998888876 8999999999999999999999999999999999999
Q ss_pred cchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHH-HHhhhcccCcccCCCCcCccchhhhhhhhhhh
Q 014698 122 RSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWF-SGFKILQEGETSNGATLAPRSNYINMKKSLSA 200 (420)
Q Consensus 122 r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (420)
|++++++.+.+..+|..+++.+++.+.+..+||+.|++.++..++.. +...++||++++++++..++++ ++
T Consensus 137 r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-----~~--- 208 (406)
T PRK11551 137 RGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQR-----AP--- 208 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcchhh-----hh---
Confidence 99999999999999999999999988888899999999877665543 4445567765432221110000 00
Q ss_pred hhhhhcccccccchhhhhh---cHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhh
Q 014698 201 SLEEMGESLKDVPWKAIFR---SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIA 277 (420)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 277 (420)
. .+..++ ++..+......++.....+....+.|.++++ .|+++.+.+.......++.++++++.
T Consensus 209 -~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~ 275 (406)
T PRK11551 209 -V-----------LRALFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLI 275 (406)
T ss_pred -h-----------HHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHH
Confidence 0 001111 2233333344444455566777789999987 59999999999999999999999999
Q ss_pred hhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHH
Q 014698 278 AQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASIL 357 (420)
Q Consensus 278 g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~ 357 (420)
|++.||++++ + ....+............... +.....+..++.|++.+...+.......+.+|+++|+++
T Consensus 276 g~l~dr~g~~-------~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~ 345 (406)
T PRK11551 276 GALMDRLRPR-------R--VVLLIYAGILASLAALAAAP-SFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTG 345 (406)
T ss_pred HHHHHHHhHH-------H--HHHHHHHHHHHHHHHHHhcC-cHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhh
Confidence 9999999864 2 22223332233333222222 233333444556666655555566666777899999999
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhc
Q 014698 358 LGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAF 408 (420)
Q Consensus 358 ~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (420)
.|+.+...++|..++|.+.|.+.|+.+++...+.....+.+++....+...
T Consensus 346 ~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (406)
T PRK11551 346 VGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLLV 396 (406)
T ss_pred hhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999866666566655554444444444333
No 20
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=100.00 E-value=1e-31 Score=246.36 Aligned_cols=343 Identities=17% Similarity=0.187 Sum_probs=244.8
Q ss_pred cccchhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhc
Q 014698 37 GRRGRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARS 116 (420)
Q Consensus 37 g~~~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 116 (420)
|...........++.++.+++.||++||+++..+.++..++.++.++ +++++.+++.|++.|++.+...+...+++.|+
T Consensus 33 g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 111 (379)
T TIGR00881 33 GLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGF-STSLWVMAALWALNGIFQGMGWPPCGRTVTKW 111 (379)
T ss_pred HHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHH-hhhHHHHHHHHHHHHhhccccCCchHHHHHHh
Confidence 33344445555567888888899999999999999999999998886 89999999999999999999999999999999
Q ss_pred CCccccchhhHHHHhhhhhHHHHHH-hhHHHhhhccchhHHHHHHHHHHHHH-HHHhhhcccCcccCCCCcCccchhhhh
Q 014698 117 IPLEERSRAVSFVFGGLSFGSVAGL-LLAPPIIENLGWESVFYIFGLLGIAW-FSGFKILQEGETSNGATLAPRSNYINM 194 (420)
Q Consensus 117 ~~~~~r~~~~~~~~~~~~~g~~~g~-~l~~~l~~~~gwr~~f~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (420)
+|+++|++++++.+.+..+|..++| .++..+.+..+||+.|++.++..++. .+...+.+|++++++.++.+++.....
T Consensus 112 ~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (379)
T TIGR00881 112 FSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFLLLRDSPQSCGLPPAEEMPNEEP 191 (379)
T ss_pred cCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHheeeCCCccccccCccccCccccc
Confidence 9999999999999999999999999 57777777889999999988877664 344445555443322111111100000
Q ss_pred hhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHH
Q 014698 195 KKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVT 274 (420)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 274 (420)
+++ ++.++.+.+..+...++++|+|.++...+..++..........+.|.|+++.+|+++.+.+.......++.+++.
T Consensus 192 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 269 (379)
T TIGR00881 192 DGD--AEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGT 269 (379)
T ss_pred ccc--cccccccccchHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhH
Confidence 000 000011111122235677889999988888888888888889999999998889999999999999999999999
Q ss_pred HhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhc-CCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccc
Q 014698 275 SIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSID-LGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEY 353 (420)
Q Consensus 275 ~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 353 (420)
++.+++.||..+++ +..................... ..+........+..|...............+..|+++
T Consensus 270 ~~~g~l~~r~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 343 (379)
T TIGR00881 270 LLAGWLSDKLFNGR------RGPLAVFFMALIIVSLLVYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKA 343 (379)
T ss_pred HHHHHHHHHHcCCc------chHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcch
Confidence 99999999875442 2222222222222222222221 1112223333344454443333333445567789999
Q ss_pred hHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeee
Q 014698 354 ASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMS 389 (420)
Q Consensus 354 ~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~ 389 (420)
|+++.|+.+....+|+.++|.+.|.+.|.. +++..
T Consensus 344 ~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~-g~~~~ 378 (379)
T TIGR00881 344 AGTAAGFVGFFAYLGGILAGLPLGYLADGF-GWAGA 378 (379)
T ss_pred hHHHHHHHHHhhhhhhhhhhhhHHHHHHhh-ccccc
Confidence 999999999999999999999999999986 56544
No 21
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=100.00 E-value=5.7e-31 Score=240.24 Aligned_cols=319 Identities=13% Similarity=0.077 Sum_probs=241.9
Q ss_pred chhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhc-----hHHHHHHHHHHHHhccccchhhhHHHHH
Q 014698 40 GRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAG-----FMPGLVLSRVLVGIGEGVSPSAATDLIA 114 (420)
Q Consensus 40 ~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~r~l~G~~~~~~~~~~~~~i~ 114 (420)
.........+..++.+++.||++|||++..+..+..++..+..+ .+ +++.+++.|+++|++.+...+...+++.
T Consensus 40 ~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~ 118 (365)
T TIGR00900 40 ALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPF-VALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLP 118 (365)
T ss_pred HHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHH-HHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444445556788888899999999999999998888887765 55 8999999999999999999999999999
Q ss_pred hcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhh
Q 014698 115 RSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINM 194 (420)
Q Consensus 115 ~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (420)
|++|+++|++++++.+.+..+|.+++|.+++.+.+..|||+.|++.++..++..+..+.++++++++++++ +.++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---- 193 (365)
T TIGR00900 119 DLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSVRIPELAASEIQ-ALSN---- 193 (365)
T ss_pred hcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccCCCcccc-ccch----
Confidence 99999999999999999999999999999999999999999999988776665444444433222111110 0000
Q ss_pred hhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHh-hhhhhHhhhhhCCCcchhhHHHHhhHHHHHHH
Q 014698 195 KKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCL-SWLPTYFSEELSLNLTEAAWVSILPPLASVLV 273 (420)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 273 (420)
+ ..++ ....+++++|+|.++...+..++......... .+.|.|.++.+|.++.+.+.......++.+++
T Consensus 194 --~---~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (365)
T TIGR00900 194 --A---VLRD-----TREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLG 263 (365)
T ss_pred --h---HHHH-----HHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHH
Confidence 0 0000 01124567888998888877777777776666 78899998878999999999999999999999
Q ss_pred HHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccc
Q 014698 274 TSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEY 353 (420)
Q Consensus 274 ~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 353 (420)
.++.+++.||.+++ .....+...............++.....+..++.|++.+...+.......+..|+++
T Consensus 264 ~~~~~~l~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 334 (365)
T TIGR00900 264 ALLLGLLGRYFKRM---------ALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAEL 334 (365)
T ss_pred HHHHHHHHHHhchh---------HHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH
Confidence 99999999998853 223333333333333333322223334455567788777666666777778889999
Q ss_pred hHHHHHHHHHhhhhhHHHHHHHHHHHhccC
Q 014698 354 ASILLGITNTVGAVPGIVGVALTGYLLDST 383 (420)
Q Consensus 354 ~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 383 (420)
|+++.|+.+...+++..++|.+.|.+.|..
T Consensus 335 ~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~ 364 (365)
T TIGR00900 335 LGRVFGAQFSLSHAAWPLGLILAGPLADHL 364 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 999999999999999999999999999875
No 22
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=7.5e-31 Score=242.93 Aligned_cols=354 Identities=14% Similarity=0.087 Sum_probs=237.9
Q ss_pred hhhhhccccccch---hhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccc
Q 014698 29 KKWVGLRIGRRGR---IYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVS 105 (420)
Q Consensus 29 ~~~l~~~~g~~~~---l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 105 (420)
.++++.+..+.+. +......+++++.+++.||++||+++..+.++..++++++++ +++++.+++.|++.|++.+..
T Consensus 39 ~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~l~G~~~~~~ 117 (405)
T TIGR00891 39 AGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACGF-APGYITMFIARLVIGIGMGGE 117 (405)
T ss_pred HHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHhhhhhh
Confidence 4444444444433 334444556888888899999999999999999999988876 899999999999999999999
Q ss_pred hhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccc--hhHHHHHHHHHHHHHHHHhhhcccCcccCCC
Q 014698 106 PSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG--WESVFYIFGLLGIAWFSGFKILQEGETSNGA 183 (420)
Q Consensus 106 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g--wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (420)
.+...+++.|++|+++|++++++.+.+..+|..+++.+++.+.+..+ ||+.|++.++..++..+.....||+++++++
T Consensus 118 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (405)
T TIGR00891 118 YGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFALWLRKNIPEAEDWKEK 197 (405)
T ss_pred hHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHhCCCChhHHHH
Confidence 99999999999999999999999999999999999999999888766 9999998776666655555666776543221
Q ss_pred CcCccchhhhhhhhhhhhh-hhhcccccccchhhhhh-c-HHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhh
Q 014698 184 TLAPRSNYINMKKSLSASL-EEMGESLKDVPWKAIFR-S-KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAA 260 (420)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 260 (420)
++.+++.....++..+.+. .+...+....+.++..+ + +.+........+.+........+.|.|+++.+|++..+.+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~ 277 (405)
T TIGR00891 198 HAGKALVRTMVDILYGGEHRIANIVMTLAAAMVQSAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVA 277 (405)
T ss_pred hhhhhhhhhHHHHHhccchhhhhhhhhhhHHhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHH
Confidence 1111100000000000000 00000000000111111 1 1122333333444455556677899999888899999999
Q ss_pred HHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhh
Q 014698 261 WVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALS 340 (420)
Q Consensus 261 ~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 340 (420)
.+.+...++.+++.++.+++.||+++| +................... .++.....+...+.+.........
T Consensus 278 ~~~~~~~~~~~~g~~~~g~l~dr~g~~--------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 348 (405)
T TIGR00891 278 NIVVFSNIGAIVGGCVFGFLGDWLGRR--------KAYVCSLLAGQLLIIPVFAI-GANVAVLGLGLFFQQMLVQGIWGI 348 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCch--------hhhHHHHHHHHHHHHHHHHh-CCchHHHHHHHHHHHHHHccchhh
Confidence 999999999999999999999999864 22222222211222222222 222222333334445444444445
Q ss_pred hhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehh
Q 014698 341 GLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFA 392 (420)
Q Consensus 341 ~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~ 392 (420)
......+..|+++|+++.|+.+...++++.++|.+.|.+.|+.|+|+..+..
T Consensus 349 ~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 349 LPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred HHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHh
Confidence 5556667789999999999999999999999999999999998667655444
No 23
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=3.7e-31 Score=254.02 Aligned_cols=365 Identities=13% Similarity=0.107 Sum_probs=253.8
Q ss_pred cccchhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhc
Q 014698 37 GRRGRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARS 116 (420)
Q Consensus 37 g~~~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 116 (420)
+.....+.....+++++.+++.||+|||+++++++++.+++++++++ +++++.++++|++.|++.+...+...++++|+
T Consensus 205 g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~af-a~s~~~llv~R~l~G~g~g~~~p~~~~~isE~ 283 (742)
T TIGR01299 205 GMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSF-VQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEF 283 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444555566677889999999999999999999999999998876 89999999999999999999999999999999
Q ss_pred CCccccchhhHHHHhhhhhHHHHHHhhHHHhhhc-------------cchhHHHHHHHHHHHHHHHHhhhcccCcccCCC
Q 014698 117 IPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN-------------LGWESVFYIFGLLGIAWFSGFKILQEGETSNGA 183 (420)
Q Consensus 117 ~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~-------------~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (420)
+|+++|++.+++...++.+|.++++.++..+... .+||+.+++.++++++.++..+++||+|++...
T Consensus 284 ~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL~~ 363 (742)
T TIGR01299 284 LAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFFLE 363 (742)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 9999999999999999999999999888776643 368999999888888877888899999876332
Q ss_pred CcCccchhh--------h------hhhhh-----hh--hhh---hhccccc-----------------ccchhhhhhc--
Q 014698 184 TLAPRSNYI--------N------MKKSL-----SA--SLE---EMGESLK-----------------DVPWKAIFRS-- 220 (420)
Q Consensus 184 ~~~~~~~~~--------~------~~~~~-----~~--~~~---~~~~~~~-----------------~~~~~~~~~~-- 220 (420)
+.+.++... + ..... .. ..+ +..+... +.+++++++.
T Consensus 364 ~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~ 443 (742)
T TIGR01299 364 NGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIKTIHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEV 443 (742)
T ss_pred CCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHHHhhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccH
Confidence 221111100 0 00000 00 000 0000000 0123444443
Q ss_pred -HHHHHHHHHHHHhHHHHHHHhhhhhhHhhhh----h-----------------CCCc----------------------
Q 014698 221 -KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEE----L-----------------SLNL---------------------- 256 (420)
Q Consensus 221 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-----------------g~~~---------------------- 256 (420)
++.+.+.+.+++..++++++..|+|.++++. + +++.
T Consensus 444 ~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (742)
T TIGR01299 444 REITIKLMGVWFTLSFGYYGLSVWFPDMIKHLQADDYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKS 523 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccchhccccccchhhhhccccccccchhhcccccc
Confidence 3446667788888999999999999876441 0 0000
Q ss_pred -----------------------------------------------------------------------chhhHHHHh
Q 014698 257 -----------------------------------------------------------------------TEAAWVSIL 265 (420)
Q Consensus 257 -----------------------------------------------------------------------~~~~~~~~~ 265 (420)
........+
T Consensus 524 ~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l 603 (742)
T TIGR01299 524 VSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENTDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFL 603 (742)
T ss_pred cccccccccccceeeccccchhhhccchhhhhccccchhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHH
Confidence 011233456
Q ss_pred hHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhh
Q 014698 266 PPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCT 345 (420)
Q Consensus 266 ~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 345 (420)
..++.+++.++.++++||+||| ..+..+.++.+++.++.....+ ....++..++.+++.+...+.....+
T Consensus 604 ~~l~~i~G~il~g~L~Dr~GRr---------~~l~~~~~lsai~~ll~~~~~s-~~~ll~~~~l~g~~~~~~~~~~~a~~ 673 (742)
T TIGR01299 604 GTLAVLPGNIVSALLMDKIGRL---------RMLAGSMVLSCISCFFLSFGNS-ESAMIALLCLFGGLSIAAWNALDVLT 673 (742)
T ss_pred HHHHHHHHHHHHHHHHHHhCCH---------HHHHHHHHHHHHHHHHHHHHcc-HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6788899999999999999963 3344555555555444444332 23333334455665555555566666
Q ss_pred hhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhccCCCCCC
Q 014698 346 HQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSKPQN 415 (420)
Q Consensus 346 ~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (420)
.+.+|++.|++++|+.+....+|++++|.+.+.+.+. +...++++.+++.++++++.+ .+++++++.
T Consensus 674 aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~--~~~~pf~i~a~~lll~~ll~~-~LPET~~~~ 740 (742)
T TIGR01299 674 VELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI--TKAAPILFASAALACGGLLAL-KLPDTRGQV 740 (742)
T ss_pred HHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHHHHH-hCCCCcccc
Confidence 7778999999999999999999999999999998875 344566666665555555444 446666543
No 24
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00 E-value=1.9e-30 Score=237.77 Aligned_cols=314 Identities=17% Similarity=0.184 Sum_probs=233.1
Q ss_pred hhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCccccc
Q 014698 44 LKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERS 123 (420)
Q Consensus 44 ~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~ 123 (420)
.....++..+.+++.||++|||++..+.++.+++.+++++ +++++.+++.|+++|++.+...+...+++.|++|+|+|+
T Consensus 65 ~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~ 143 (394)
T PRK10213 65 AFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSF-ANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVP 143 (394)
T ss_pred HHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHH-HChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHH
Confidence 3344456777788899999999999999999999988876 899999999999999999999999999999999999999
Q ss_pred hhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHh-hhcccCcccCCCCcCccchhhhhhhhhhhhh
Q 014698 124 RAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGF-KILQEGETSNGATLAPRSNYINMKKSLSASL 202 (420)
Q Consensus 124 ~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (420)
+++++...+.++|..++|++++.+.+.+|||+.|++.++.+++..+.. ...||++++++ +
T Consensus 144 ~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~~~~~~-~------------------ 204 (394)
T PRK10213 144 KALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLPGEPS-H------------------ 204 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCCCcccc-c------------------
Confidence 999999999999999999999999999999999999887766544332 33454321100 0
Q ss_pred hhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhh
Q 014698 203 EEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFAD 282 (420)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d 282 (420)
...+.++.+|+|.++...+..++.....+....+.+.++.+++|+++.+.+......+++.+++.++.+++.|
T Consensus 205 -------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~ 277 (394)
T PRK10213 205 -------QKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILK 277 (394)
T ss_pred -------chhHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0001346778999888776666666666666667644444557999999999999999999999999999999
Q ss_pred hhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHH
Q 014698 283 NLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITN 362 (420)
Q Consensus 283 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~ 362 (420)
|.+ ++...............+.... ++........++.|++.+...+.......+..| ++++++.+...
T Consensus 278 r~~---------~~~l~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 346 (394)
T PRK10213 278 RSV---------KLALAGAPLVLAVSALVLTLWG-SDKIVATGVAIIWGLTFALVPVGWSTWITRSLA-DQAEKAGSIQV 346 (394)
T ss_pred ccc---------hhHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCc-ccHHHHHHHHH
Confidence 853 2232222222222222222222 223444445566787777666666656666665 56778888888
Q ss_pred HhhhhhHHHHHHHHHHHhccCCceeeeehhhhHH
Q 014698 363 TVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIF 396 (420)
Q Consensus 363 ~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~ 396 (420)
...++|..+||.+.|.+.|.. ++...+...+..
T Consensus 347 ~~~~lg~~~G~~l~G~l~~~~-g~~~~~~~~~~~ 379 (394)
T PRK10213 347 AVIQLANTCGAAIGGYALDNI-GLTSPLMLSGTL 379 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhcc-ChhhHHHHHHHH
Confidence 888999999999999999986 565555554443
No 25
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=100.00 E-value=3.1e-31 Score=246.90 Aligned_cols=363 Identities=15% Similarity=0.184 Sum_probs=244.4
Q ss_pred hhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHh---hchHHHHHHHHHHHHhccccchhhhHHHHHhcC
Q 014698 41 RIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLL---AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSI 117 (420)
Q Consensus 41 ~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 117 (420)
..+.....++.+..+++.||.+||+++..+.++.+++.+..+.. .++++.+.+.|++.|++.+..++.....+.|++
T Consensus 68 ~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~ 147 (438)
T TIGR00712 68 SAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWW 147 (438)
T ss_pred HHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhc
Confidence 34444455567888888999999999999999999888776542 246778889999999999999998899999999
Q ss_pred CccccchhhHHHHhhhhhHHHHHHhhHHHhhh-ccchhHHHHHHHHHHHHH-HHHhhhcccCcccCCCCcCccchhhhhh
Q 014698 118 PLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE-NLGWESVFYIFGLLGIAW-FSGFKILQEGETSNGATLAPRSNYINMK 195 (420)
Q Consensus 118 ~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~-~~gwr~~f~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (420)
|+++|++++++.+.+.++|..+++.+.+...+ ..+||..|++.++.+++. .+..+++||++++.+.++.++.+. ...
T Consensus 148 ~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 226 (438)
T TIGR00712 148 SQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDTPQSCGLPPIEEYRN-DYP 226 (438)
T ss_pred CcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCCchhccc-ccc
Confidence 99999999999999999999999888765444 569999999998887774 345555666543321111000000 000
Q ss_pred hhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHH
Q 014698 196 KSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTS 275 (420)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 275 (420)
++..++ ++.+.+.++...+.++|++.+|...+..++.....++...+.|.|+++..|+++.++++......+.++++++
T Consensus 227 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~ 305 (438)
T TIGR00712 227 DDYNEK-AEQELTAKEIFMQYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTL 305 (438)
T ss_pred cccccc-cccccchHHHHHHHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHH
Confidence 000000 0000000011123467899999888887777777888889999999998899999999999999999999999
Q ss_pred hhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCC-CcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccch
Q 014698 276 IAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLG-LPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYA 354 (420)
Q Consensus 276 ~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 354 (420)
+.|++.||+++++ +....................... +........+..|.+.............+..|+++|
T Consensus 306 ~~g~l~dr~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 379 (438)
T TIGR00712 306 LCGWMSDKVFKGN------RGATGVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKAA 379 (438)
T ss_pred HHHHHHHHhccCc------ccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhhe
Confidence 9999999997542 111111111111111221122211 122222223333433221111112234566788999
Q ss_pred HHHHHHHHHhhhhhH-HHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhccCCC
Q 014698 355 SILLGITNTVGAVPG-IVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSK 412 (420)
Q Consensus 355 g~~~g~~~~~~~~g~-~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (420)
|++.|+.+...++++ .++|.+.|.+.|+. +++..+.+..+..+++.+..+...++.|
T Consensus 380 g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (438)
T TIGR00712 380 GTAAGFTGLFGYLGGSVAASAIVGYTVDFF-GWDGGFMVMIGGSILAVILLIVVMIGEK 437 (438)
T ss_pred eeehhhhchHHHhhhhhhcchhHHHHHHhc-cchHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 999999999888875 68999999999986 6888888777666666666665555544
No 26
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=3.6e-31 Score=246.48 Aligned_cols=322 Identities=17% Similarity=0.143 Sum_probs=223.2
Q ss_pred chhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCc
Q 014698 40 GRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPL 119 (420)
Q Consensus 40 ~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 119 (420)
.........+++++.+++.||++||+++..+..+.++++...++ +++++.++++|+++|++.+...+....++.|++|+
T Consensus 59 ~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~-~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~ 137 (426)
T PRK12307 59 ATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGL-ASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPK 137 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCH
Confidence 33444555566888888899999999999999999999998886 89999999999999999999999999999999999
Q ss_pred cccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhhhhhhh
Q 014698 120 EERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLS 199 (420)
Q Consensus 120 ~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (420)
|+|++++++...+.++|.++++.+.+.+.+.++||+.|++..+..++........||++++++++.++++ ++
T Consensus 138 ~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~------~~-- 209 (426)
T PRK12307 138 HLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLPVLLVIYIRARAPESKEWEEAKLSGKG------KH-- 209 (426)
T ss_pred hHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHHHHHHHHHHHHCCCChHHHHhhhhccc------cc--
Confidence 9999999999999999999999999999998999999988654433333222223433221111100000 00
Q ss_pred hhhhhhcccccccchhhhhhcHHHHHHHHHHH---HhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHh
Q 014698 200 ASLEEMGESLKDVPWKAIFRSKAVWAMIYAHF---CGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSI 276 (420)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 276 (420)
++...+..+.++++++|+|.++....... ......+....++|.|+++. |.++.+.+...+...++.++++++
T Consensus 210 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~g~~~ 285 (426)
T PRK12307 210 ---SQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAGE-GFDTGVVSNLMTAAAFGTVLGNIV 285 (426)
T ss_pred ---cccchhhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHH
Confidence 00000111224567888887765433222 22233344667899999874 999999999889999999999999
Q ss_pred hhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHh--hhhhhhhhhhhhhccCccch
Q 014698 277 AAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLAL--SSFALSGLYCTHQDISPEYA 354 (420)
Q Consensus 277 ~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~ 354 (420)
.+++.||+++| + ....+.....+.............. .......+.+. ............+.+|+++|
T Consensus 286 ~g~l~dr~~~~--------~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 355 (426)
T PRK12307 286 WGLCADRIGLK--------K-TFSIGLLMSFLFIFPLFRIPQDNYL-LLGACLFGLMATNVGVGGLVPKFLYDYFPLEVR 355 (426)
T ss_pred HHHHHHHhccH--------H-HHHHHHHHHHHHHHHHHHHccccHH-HHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHH
Confidence 99999999864 2 2223332222222222211222222 22222333322 12222333445677899999
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHhccCC
Q 014698 355 SILLGITNTVGAVPGIVGVALTGYLLDSTH 384 (420)
Q Consensus 355 g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~ 384 (420)
|++.|+.+...++++.++|.+.|.+.|..+
T Consensus 356 g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g 385 (426)
T PRK12307 356 GLGTGLIYNLAATSGTFNSMAATWLGITMG 385 (426)
T ss_pred hhhhhHHHHHHhHHHHHHHHHHHHHHHccc
Confidence 999999999999999999999999999873
No 27
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=100.00 E-value=4e-31 Score=250.49 Aligned_cols=336 Identities=19% Similarity=0.176 Sum_probs=254.2
Q ss_pred cccccchhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHH
Q 014698 35 RIGRRGRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIA 114 (420)
Q Consensus 35 ~~g~~~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~ 114 (420)
..+.....+.....++.++.+++.||++|||++..+..+..+++++++. ++|++.+++.|+++|++.+...+...+++.
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~ 116 (485)
T TIGR00711 38 QVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGV-APNLELMIIFRVIQGFGGGPLIPLSFSTLL 116 (485)
T ss_pred hhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhC-cCCHHHHHHHHHHHHhhhhhHHHHHHHHHH
Confidence 3444445555566667888888899999999999999999999999886 899999999999999999999999999999
Q ss_pred hcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHH-HHhhhcccCcccCCCCcCccch---
Q 014698 115 RSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWF-SGFKILQEGETSNGATLAPRSN--- 190 (420)
Q Consensus 115 ~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--- 190 (420)
|++|+++|++++++...+..+|..+||.+++++.++++||+.|++.++++++.. +..+..||+++.++ ++.|...
T Consensus 117 ~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~~g~~l 195 (485)
T TIGR00711 117 NIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKPAAS-ENFDFLGLLL 195 (485)
T ss_pred HHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCcccccc-CCCcHHHHHH
Confidence 999999999999999999999999999999999999999999999888776654 34445555433222 1111110
Q ss_pred ------------hhhhhhhhhhh------------------hhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHH
Q 014698 191 ------------YINMKKSLSAS------------------LEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTC 240 (420)
Q Consensus 191 ------------~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (420)
....++++.++ .+|.+++++..+ .+++|+|+++...+..++..+..+..
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (485)
T TIGR00711 196 LSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWELTDDNPLVD-LRLFKYRNFTIGCVYMSLLGLGLYGS 274 (485)
T ss_pred HHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCCCCccC-HHHHcCCChHHHHHHHHHHHHHHHHH
Confidence 00000111100 012222222222 36788999988888888888888888
Q ss_pred hhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHh--hcCC
Q 014698 241 LSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSS--IDLG 318 (420)
Q Consensus 241 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 318 (420)
..+.|.|+++.+|+++.+++.......++.+++.++.|++.||+++| + ....+............ ...+
T Consensus 275 ~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~--------~-~~~~g~~~~~~~~~~~~~~~~~~ 345 (485)
T TIGR00711 275 FYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPR--------K-LVTIGLILYAVGFYWRAFTFTPD 345 (485)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcH--------H-HHHHHHHHHHHHHHHHhccCCCC
Confidence 89999999998999999999999999999999999999999999863 2 23333333333333322 2222
Q ss_pred Cc-HHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhcc
Q 014698 319 LP-HWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDS 382 (420)
Q Consensus 319 ~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 382 (420)
.. .......++.|++.+....+......+..|+++++++.|+.+..+.+|+.+|+.+.+.+.++
T Consensus 346 ~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 346 TPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23 33344456677877766666666677788999999999999999999999999999999875
No 28
>PRK15075 citrate-proton symporter; Provisional
Probab=100.00 E-value=2e-30 Score=241.21 Aligned_cols=306 Identities=14% Similarity=0.108 Sum_probs=209.6
Q ss_pred HHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHH--------HHHHHHHHHHhccccchhhhHHHHHhcCCcc
Q 014698 49 LLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMP--------GLVLSRVLVGIGEGVSPSAATDLIARSIPLE 120 (420)
Q Consensus 49 ~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~ 120 (420)
+++++.+++.||+||||+++.+..++.+++.++++ +++++ .++++|+++|++.+...+....+++|++|++
T Consensus 71 ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~ 149 (434)
T PRK15075 71 LGAIVLGAYIDRVGRRKGLIVTLSIMASGTLLIAF-VPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPG 149 (434)
T ss_pred hHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHh-CCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcc
Confidence 35678899999999999999999999999999986 88876 4689999999999999999999999999999
Q ss_pred ccchhhHHHHhhhhhHHHHHHhhHHHhh--------hccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhh
Q 014698 121 ERSRAVSFVFGGLSFGSVAGLLLAPPII--------ENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYI 192 (420)
Q Consensus 121 ~r~~~~~~~~~~~~~g~~~g~~l~~~l~--------~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (420)
+|++++++...+.++|..+++.+++.+. +.+|||++|++..+...+........||+++..+++
T Consensus 150 ~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~-------- 221 (434)
T PRK15075 150 RKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCLIVPFIFLIRRSLEETEEFLARK-------- 221 (434)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhh--------
Confidence 9999999999999898888888877653 467999999875543322222111112211000000
Q ss_pred hhhhhhhhhhhhhcccccccchhhhhhcHHHHHH-HHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHH
Q 014698 193 NMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAM-IYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASV 271 (420)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 271 (420)
++...+..+++..++++.+.. ....++.....+....|.|.|+++.+|++..+.++......++.+
T Consensus 222 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~ 288 (434)
T PRK15075 222 -------------HRPSMREIFRSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNF 288 (434)
T ss_pred -------------hccccccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 000001112334455555443 333444556677788899999998889999999988888899999
Q ss_pred HHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHH-HhhcCCCcH-HHHHHHHHHHHHhhhhhhhhhhhhhhcc
Q 014698 272 LVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTL-SSIDLGLPH-WEIVGILTAGLALSSFALSGLYCTHQDI 349 (420)
Q Consensus 272 ~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 349 (420)
++.++.|+++||+++| +................ .....+... ......++.+++.+...+.......+..
T Consensus 289 ~~~~~~g~l~Dr~g~r--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~ 360 (434)
T PRK15075 289 IWLPIGGALSDRIGRR--------PVLIAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGSYNGAMVVALTEVM 360 (434)
T ss_pred HHHHHHHHHHHHhcch--------HHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHC
Confidence 9999999999999974 22222221111111111 111112122 2222233445555544444445566778
Q ss_pred CccchHHHHHHHHHhhh-hhHHHHHHHHHHHhccCC
Q 014698 350 SPEYASILLGITNTVGA-VPGIVGVALTGYLLDSTH 384 (420)
Q Consensus 350 ~~~~~g~~~g~~~~~~~-~g~~~~~~~~g~l~~~~~ 384 (420)
|++.|+++.|+.+.... +++.++|.+.|.+.|..+
T Consensus 361 p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g 396 (434)
T PRK15075 361 PAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTG 396 (434)
T ss_pred CCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcC
Confidence 99999999999766555 468889999999999874
No 29
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=100.00 E-value=9.2e-31 Score=239.92 Aligned_cols=331 Identities=16% Similarity=0.118 Sum_probs=241.2
Q ss_pred cccchhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhc
Q 014698 37 GRRGRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARS 116 (420)
Q Consensus 37 g~~~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 116 (420)
|.....+.....++++..+++.||+|||+++..+.++..++.+.+++ ++|++.+++.|++.|++.+...+.....+.|+
T Consensus 41 g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 119 (377)
T TIGR00890 41 AIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAI-ADSLAALYLTYGLASAGVGIAYGIALNTAVKW 119 (377)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHH-HHHHHHHHHHHHHHhHHHHHHHHhHHHHHHHH
Confidence 33334444555566788888899999999999999999999998886 99999999999999999998888888899999
Q ss_pred CCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhh-cccCcccCCCCcCccchhhhhh
Q 014698 117 IPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKI-LQEGETSNGATLAPRSNYINMK 195 (420)
Q Consensus 117 ~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 195 (420)
+| |+|+++.++...+.++|..+++++.+.+.+..|||+.|++.++..++..+..++ ++++++++++++ ++.
T Consensus 120 ~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~------ 191 (377)
T TIGR00890 120 FP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAFLIGYPPGQLIKTN-IEV------ 191 (377)
T ss_pred cC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHheecCchhccccC-ccc------
Confidence 87 679999999999999999887777777778889999999999888776544444 443332211110 000
Q ss_pred hhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHH
Q 014698 196 KSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTS 275 (420)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 275 (420)
+.++.+.++.+|+|+++...+..++..........+.+.|.++ +|.+..+.+...+...+..+++++
T Consensus 192 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 258 (377)
T TIGR00890 192 ------------SVKDYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQS-LGLSDGFLVLAVSISSIFNGGGRP 258 (377)
T ss_pred ------------chhhhhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHH
Confidence 0001124567788888877776666666666666677777665 688888889999999999999999
Q ss_pred hhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcH-HHHHHHHHHHHHhhhhhhhhhhhhhhccCccch
Q 014698 276 IAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPH-WEIVGILTAGLALSSFALSGLYCTHQDISPEYA 354 (420)
Q Consensus 276 ~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 354 (420)
+.|++.||+++| .....+..............++... .......+.+.+.+...........+..|+++|
T Consensus 259 ~~g~l~dr~g~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~ 329 (377)
T TIGR00890 259 FLGALSDKIGRQ---------KTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANS 329 (377)
T ss_pred HHHHHHHHHhhh---------hhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhh
Confidence 999999999864 2222333333333333333222222 222333455666554444445556677899999
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHH
Q 014698 355 SILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYL 399 (420)
Q Consensus 355 g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~ 399 (420)
+++.|+.+....+|..++|.+.|.+.|.. +++..|.+.+++.++
T Consensus 330 ~~~~g~~~~~~~~g~~~~~~~~g~l~~~~-g~~~~f~~~~~~~~~ 373 (377)
T TIGR00890 330 AANYGFLYTAKAVAGIFGGLIASHALTEI-GFEYTFIVTGAFALT 373 (377)
T ss_pred hhHhHHHHHHHHHHHHHHHHHHHHHHhhh-chhhHHHHHHHHHHH
Confidence 99999999999999999999999999986 688777776654443
No 30
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=100.00 E-value=1.1e-31 Score=250.29 Aligned_cols=345 Identities=15% Similarity=0.158 Sum_probs=246.9
Q ss_pred HhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHH-HHHHHHhccccchhhhHHHHHhcCCccccchh
Q 014698 47 TNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVL-SRVLVGIGEGVSPSAATDLIARSIPLEERSRA 125 (420)
Q Consensus 47 ~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 125 (420)
..++..+.+++.||++||++++.+.++..++++++++ +++++.+++ .|+++|++.+...+...+++.|+++ ++|+++
T Consensus 67 ~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a 144 (455)
T TIGR00892 67 LYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASF-SSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLA 144 (455)
T ss_pred HHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHH-hhhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHH
Confidence 3445778888899999999999999999999988876 888888765 5799999998777777888999996 789999
Q ss_pred hHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCc-cch--hhhhhhhhhhhh
Q 014698 126 VSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAP-RSN--YINMKKSLSASL 202 (420)
Q Consensus 126 ~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~ 202 (420)
.++.+.+..+|..++|++++.+.+.+|||+.|++.++..++..+..+++.+.++.++..+.+ ++. .....++. ...
T Consensus 145 ~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 223 (455)
T TIGR00892 145 NGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALMRPVGPSQRVSKSKSKEGLPPDGSTKKL-SKK 223 (455)
T ss_pred HHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCCCCcccccccccccccCCCCCccccc-ccc
Confidence 99999999999999999999999999999999999988776544444443322211100000 000 00000000 000
Q ss_pred hhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhh
Q 014698 203 EEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFAD 282 (420)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d 282 (420)
...++..+..+ .+++++|.++......++.....+....++|.|+++ .|++..+++...+..+++.++++++.+++.|
T Consensus 224 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d 301 (455)
T TIGR00892 224 STAEKINRFLD-FSLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARPSCGLIAG 301 (455)
T ss_pred chhhhhhhhcc-hHHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 00000011111 257889999988888787777777888899999987 5999999999999999999999999999999
Q ss_pred hhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHH
Q 014698 283 NLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITN 362 (420)
Q Consensus 283 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~ 362 (420)
|...++. ++.....+.........+.... ++.....+..++.|++.+...+.......+.+|+++++++.|+.+
T Consensus 302 ~~~~~~~-----~~~~~~~~~~~~~l~~ll~~~~-~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~ 375 (455)
T TIGR00892 302 LKWIRPH-----VQYLFSFALLFNGLTHLLCALA-GDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVT 375 (455)
T ss_pred ccccCHH-----HHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHH
Confidence 7422100 2233323333222222222222 223444555677788777666666677777789999999999999
Q ss_pred HhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHH
Q 014698 363 TVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGT 402 (420)
Q Consensus 363 ~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~ 402 (420)
...++|++++|.+.|.+.|..++++..|+..+++.+++.+
T Consensus 376 ~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 376 IVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred HHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHH
Confidence 9999999999999999999877788888887776555544
No 31
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=8.8e-31 Score=247.87 Aligned_cols=367 Identities=15% Similarity=0.086 Sum_probs=234.5
Q ss_pred chhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhch------HHHHHHHHHHHHhccccchhhhHHHH
Q 014698 40 GRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGF------MPGLVLSRVLVGIGEGVSPSAATDLI 113 (420)
Q Consensus 40 ~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~~~~~~~~~~~i 113 (420)
.........+++++.+++.||+|||+++..+.++..++++++++ +++ ++.++++|+++|++.+...+....++
T Consensus 62 ~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~ 140 (502)
T TIGR00887 62 NGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGL-SPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIIT 140 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH-ccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHH
Confidence 33444455566888888899999999999999999999988775 554 78899999999999999999999999
Q ss_pred HhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhh-----------------------ccchhHHHHHHHHHHHHHHHH
Q 014698 114 ARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE-----------------------NLGWESVFYIFGLLGIAWFSG 170 (420)
Q Consensus 114 ~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~-----------------------~~gwr~~f~~~~~~~~~~~~~ 170 (420)
+|++|+++|++++++.+....+|.++++.++..+.. .++||+.|.+.++++++..+.
T Consensus 141 ~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~ 220 (502)
T TIGR00887 141 SEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYF 220 (502)
T ss_pred HHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999988876532 247999999988888887777
Q ss_pred hhhcccCcccCCCCcCccc-hhh--h---hh--hhhhhhhhhh--cccccccchhhhhhc---HHH----HHHHHHHHHh
Q 014698 171 FKILQEGETSNGATLAPRS-NYI--N---MK--KSLSASLEEM--GESLKDVPWKAIFRS---KAV----WAMIYAHFCG 233 (420)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~-~~~--~---~~--~~~~~~~~~~--~~~~~~~~~~~~~~~---~~~----~~~~~~~~~~ 233 (420)
.+++||+|++...++++++ ... . .. ++..++.++. .++..+.++++++++ ++. +......+..
T Consensus 221 ~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 300 (502)
T TIGR00887 221 RLTIPETPRYTADVAKDVEQAASDMSAVLQVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLL 300 (502)
T ss_pred HHhCCCCHHHHHHhCcchHHHHHHHHHHhccccccCcccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 8899999986322222111 100 0 00 0000000000 001112346677653 222 1122233444
Q ss_pred HHHHHHHhhhhhhHhhhhhCCCcchhhH------------HHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHH
Q 014698 234 SWGHYTCLSWLPTYFSEELSLNLTEAAW------------VSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTI 301 (420)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~------------~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 301 (420)
...+++...+.|.++++ .|++..+.+. ......++.+++.++.+++.||+||| +..+ .
T Consensus 301 ~~~~y~~~~~~p~i~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR--------~~l~-~ 370 (502)
T TIGR00887 301 DIAFYGVNLNQKVILSA-IGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRK--------PIQL-M 370 (502)
T ss_pred HHHHHccccccHHHHHH-HcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcch--------hHHH-H
Confidence 55666777789999976 4876543221 12334456667888999999999974 2222 2
Q ss_pred HHHHhHHHH-HHHh-hcC-CCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHH
Q 014698 302 AFLSPAVCM-TLSS-IDL-GLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGY 378 (420)
Q Consensus 302 ~~~~~~~~~-~~~~-~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~ 378 (420)
+.....++. .+.. ... ..........+....+.....+.......|.+|++.|+++.|+.+...+++++++|.+.+.
T Consensus 371 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~ 450 (502)
T TIGR00887 371 GFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLY 450 (502)
T ss_pred HHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhh
Confidence 222222221 1111 111 1111111111111111111222333344566889999999999999999999999999999
Q ss_pred HhccCC---------ceeeeehhhhHHHHHHHHHHhhhccCCCCCCCCC
Q 014698 379 LLDSTH---------SWSMSLFAPSIFFYLTGTIVWLAFASSKPQNFST 418 (420)
Q Consensus 379 l~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (420)
+.|..+ ++...+.+.+++.+++.+. +++.+|+++++.+|
T Consensus 451 l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~-~~~lpEt~~~~lee 498 (502)
T TIGR00887 451 LAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILF-TLLIPETKGKSLEE 498 (502)
T ss_pred hhccccccccccccccchHHHHHHHHHHHHHHHH-heEeccCCCCCHHh
Confidence 998531 2334566666655555444 34557777766554
No 32
>PRK10489 enterobactin exporter EntS; Provisional
Probab=100.00 E-value=5.1e-31 Score=244.34 Aligned_cols=348 Identities=12% Similarity=-0.002 Sum_probs=246.9
Q ss_pred cccchhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHH----hhchHHHHHHHHHHHHhccccchhhhHHH
Q 014698 37 GRRGRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPL----LAGFMPGLVLSRVLVGIGEGVSPSAATDL 112 (420)
Q Consensus 37 g~~~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~r~l~G~~~~~~~~~~~~~ 112 (420)
|...........+++.+.+++.||++|||++..+..+.+++....+. ..++++.+++.|+++|++.+...+...++
T Consensus 55 g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~ 134 (417)
T PRK10489 55 GLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAA 134 (417)
T ss_pred HHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 33333444455556788888899999999998888877776654432 14678889999999999988888888999
Q ss_pred HHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhh
Q 014698 113 IARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYI 192 (420)
Q Consensus 113 i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (420)
+.|++|+++|+++.++.....++|..+||.+++.+.+..+||+.|++.++..++..+..+.+|++++++++++ +.
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~--- 209 (417)
T PRK10489 135 TPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLLRLPALPPPPQPRE--HP--- 209 (417)
T ss_pred hhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhCCCCCCCCcccc--cc---
Confidence 9999999999999999999999999999999999999889999999888777766666667776543221110 00
Q ss_pred hhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHH
Q 014698 193 NMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVL 272 (420)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 272 (420)
.+ + ....++.++++|.++...+..++.. .......+.|.|+++.+|.++.+.+++.+...++.++
T Consensus 210 ------~~---~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~i 274 (417)
T PRK10489 210 ------LR---S-----LLAGFRFLLASPVVGGIALLGGLLT-MASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAAL 274 (417)
T ss_pred ------hH---H-----HHHHHHHHHcChHHHHHHHHHHHHH-HHHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHH
Confidence 00 0 0112345677887766655544433 2456677899999987899999999999999999999
Q ss_pred HHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCcc
Q 014698 273 VTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPE 352 (420)
Q Consensus 273 ~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 352 (420)
+.++.+++.||.+++ +.. ..+.....+........+ +.....+..++.|.+.+...+.......+..|++
T Consensus 275 g~~~~~~l~~~~~~~--------~~l-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~ 344 (417)
T PRK10489 275 GALTSGWLAHSARPG--------LLM-LLSTLGSFLAVGLFGLMP-MWILAVLCLALFGYLSAISSLLQYTLLQTQTPDE 344 (417)
T ss_pred HHHHHHHhhhccCcc--------hHH-HHHHHHHHHHHHHHHccc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHH
Confidence 999999999985432 222 222223333333333222 2233344455666666544444445566678889
Q ss_pred chHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhccCCCCCC
Q 014698 353 YASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSKPQN 415 (420)
Q Consensus 353 ~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (420)
.||+++|+.+...++|..++|.+.|.+.|.. ++...+...+++.++.+++.....++.|+++
T Consensus 345 ~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (417)
T PRK10489 345 MLGRINGLWTAQNVTGDAIGAALLGGLGAMM-TPVASASASGFGLLIIGVLLLLVLGELRRFR 406 (417)
T ss_pred HHHHHHHHHHHHHhhhHhHHHHHHHHHHHHh-chhhHHHHHHHHHHHHHHHHHHhcccccccc
Confidence 9999999999999999999999999999987 5555666666655565555555555544443
No 33
>PRK03699 putative transporter; Provisional
Probab=99.98 E-value=6.4e-30 Score=235.01 Aligned_cols=342 Identities=16% Similarity=0.142 Sum_probs=242.7
Q ss_pred hhhhhccccccch---hhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccc
Q 014698 29 KKWVGLRIGRRGR---IYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVS 105 (420)
Q Consensus 29 ~~~l~~~~g~~~~---l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 105 (420)
.++++.+..+.+. .......++.++.+++.||++|||++..+..+..++..+.++ +++++.+++.|+++|++.+..
T Consensus 34 ~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~-~~~~~~~~~~~~l~G~~~g~~ 112 (394)
T PRK03699 34 AEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMF-SHSLALFSIAMFVLGVVSGIT 112 (394)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH-cchHHHHHHHHHHHHHhhHhh
Confidence 4444444333333 333445566788888899999999999999999999988886 899999999999999999988
Q ss_pred hhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhh-ccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCC
Q 014698 106 PSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE-NLGWESVFYIFGLLGIAWFSGFKILQEGETSNGAT 184 (420)
Q Consensus 106 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~-~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (420)
.+...+++.|++|+++|+++++..+....+|..++|.+.+.+.+ ..|||+.|.+.+++.++..+..++ .+.|+.++++
T Consensus 113 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~~~-~~~p~~~~~~ 191 (394)
T PRK03699 113 MSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILTLF-SEFPALGKHA 191 (394)
T ss_pred ccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHh-cCCccccccC
Confidence 88899999999999999999999999999999999999887764 579999999988877665443332 2222111110
Q ss_pred cCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHH
Q 014698 185 LAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSI 264 (420)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 264 (420)
+ +++ ++.. ++ ..++.++...+..++.....+....|.|.|+++.+|+|+.+.+.+.+
T Consensus 192 ~-~~~-----------------~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~ 248 (394)
T PRK03699 192 P-KAD-----------------KPVA----KE-KWGIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVS 248 (394)
T ss_pred c-ccc-----------------Cccc----cc-cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHH
Confidence 0 000 0000 01 11466677777777777777888899999999888999999999999
Q ss_pred hhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhh
Q 014698 265 LPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYC 344 (420)
Q Consensus 265 ~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 344 (420)
...++..+++++.++++||+++| + ... ...........+..... +..+.....+..|++.+...+.....
T Consensus 249 ~~~~~~~ig~~~~g~l~dr~~~~-------~-~l~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~G~~~~~~~~~~~~~ 318 (394)
T PRK03699 249 NFWMAYMVGMWIFSFIVRFFDLQ-------R-ILT-VLAGLALVLMYLFVNTD-DPSHLLYAILGLGFFSSAIYTTIITL 318 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhchh-------h-HHH-HHHHHHHHHHHHHHHcC-CchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999874 2 222 22222222222222222 23344444566666665444444443
Q ss_pred hhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhh
Q 014698 345 THQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLA 407 (420)
Q Consensus 345 ~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (420)
..+. .++++++..|......++|+.++|.+.|++.|.. +++..++..+++..++.+.....
T Consensus 319 ~~~~-~~~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~ 379 (394)
T PRK03699 319 GSQQ-TKVASPKLVNFILTCGTIGTMLTFVVTSPIVAHF-GLQAALLTANGLYAVVFVMCILL 379 (394)
T ss_pred HHHH-ccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHh-CchhhhhhhHHHHHHHHHHHHHH
Confidence 3333 3455678889999999999999999999999986 57777777666665554443333
No 34
>TIGR00898 2A0119 cation transport protein.
Probab=99.98 E-value=4.9e-30 Score=243.90 Aligned_cols=361 Identities=15% Similarity=0.066 Sum_probs=243.2
Q ss_pred cccchhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhc
Q 014698 37 GRRGRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARS 116 (420)
Q Consensus 37 g~~~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 116 (420)
+....++.....+++++.+++.||+|||+++..+.++..+++++.++ +++++.+++.|++.|++.+...+....++.|+
T Consensus 130 ~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~ 208 (505)
T TIGR00898 130 DLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAF-SPNYTVFLVFRLLVGMGIGGIWVQAVVLNTEF 208 (505)
T ss_pred HHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHH-cccHHHHHHHHHHHHhhccchHHHHHHHhhee
Confidence 33345556666777888999999999999999999999999998886 99999999999999999999999999999999
Q ss_pred CCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhhhh
Q 014698 117 IPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKK 196 (420)
Q Consensus 117 ~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (420)
+|+++|+++.++...+..+|.+++|.++..+.+ ||+.|++.+++.++..+..+++||++++...+.+.++.....++
T Consensus 209 ~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~a~~~l~~ 285 (505)
T TIGR00898 209 LPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFLLSWFVPESPRWLISQGRIEEALKILQR 285 (505)
T ss_pred cChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHHHhcCCChHHHHHCCCHHHHHHHHHH
Confidence 999999999999999999999999998876653 99999999998887777778889987653322222111100000
Q ss_pred -----------hhhhh--hhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHH
Q 014698 197 -----------SLSAS--LEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVS 263 (420)
Q Consensus 197 -----------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 263 (420)
+.... .++..++.++.++++++++|+++...+......+.........+.+..+ .+.+.. ...
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~ 361 (505)
T TIGR00898 286 IAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLVLDLGN-LGGNIY---LDL 361 (505)
T ss_pred HHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHhccccc-cCCChH---HHH
Confidence 00000 0111111223467889999988777665554444433333333333332 344432 333
Q ss_pred HhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCc-HHHHHHHHHHHHHhhhhhhhhh
Q 014698 264 ILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLP-HWEIVGILTAGLALSSFALSGL 342 (420)
Q Consensus 264 ~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~ 342 (420)
...++..+++.++.+++.||+||| ..........+++.+.....++.. .......++.+.+.+.......
T Consensus 362 ~~~~~~~i~~~~~~~~l~dr~grr---------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (505)
T TIGR00898 362 FISGLVELPAKLITLLLIDRLGRR---------YTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVY 432 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCH---------HHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 455677888899999999999964 333333333333333333333222 2333333444444444444555
Q ss_pred hhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhccCCCCCCCCC
Q 014698 343 YCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSKPQNFST 418 (420)
Q Consensus 343 ~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (420)
....+.+|++.|+++.|+.+....+|++++|.+.+ +.+. +...++.+.++..+++++.. .+.+++++++.++
T Consensus 433 ~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~~--~~~~~~~~~~~~~~~~~~~~-~~lpet~~~~l~~ 504 (505)
T TIGR00898 433 LYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LGEK--WLFLPLVLFGGLALLAGILT-LFLPETKGVPLPE 504 (505)
T ss_pred HHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHHH--HHhhHHHHHHHHHHHHHHHH-HcCcCCCCCCCCC
Confidence 55667789999999999999999999999999998 4443 34456666666555555544 3456666665543
No 35
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.98 E-value=1.2e-30 Score=247.15 Aligned_cols=370 Identities=16% Similarity=0.120 Sum_probs=242.2
Q ss_pred ccccchhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHh--hchHHHHHHHHHHHHhccccchhhhHHHH
Q 014698 36 IGRRGRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLL--AGFMPGLVLSRVLVGIGEGVSPSAATDLI 113 (420)
Q Consensus 36 ~g~~~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~r~l~G~~~~~~~~~~~~~i 113 (420)
.+.....+.....++.++.+++.||++|||++..+.+++.++.+++... ..+++.+++.|+++|++.+...+....++
T Consensus 73 ~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i 152 (481)
T TIGR00879 73 WGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYL 152 (481)
T ss_pred HHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHH
Confidence 3434444555556678888889999999999999999999998888542 23455899999999999999999999999
Q ss_pred HhcCCccccchhhHHHHhhhhhHHHHHHhhH---HHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccch
Q 014698 114 ARSIPLEERSRAVSFVFGGLSFGSVAGLLLA---PPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSN 190 (420)
Q Consensus 114 ~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~---~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (420)
+|++|+++|++++++.+.+..+|..+++.++ ....+..+||+.|++.++..++..+..+++||+++....++++++.
T Consensus 153 ~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 232 (481)
T TIGR00879 153 SEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEA 232 (481)
T ss_pred HccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcCChHHH
Confidence 9999999999999999999999999999999 6666778999999997777666666677788875421111110000
Q ss_pred hhh--h-------hhhhh------hhhhhhcccccccchhhhhh------cHHHHHHHHHHHHhHHHHHHHhhhhhhHhh
Q 014698 191 YIN--M-------KKSLS------ASLEEMGESLKDVPWKAIFR------SKAVWAMIYAHFCGSWGHYTCLSWLPTYFS 249 (420)
Q Consensus 191 ~~~--~-------~~~~~------~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (420)
... + +.+.. ...++..++..+..+++.++ .+.++...+..+...........+.|.+.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (481)
T TIGR00879 233 RKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFE 312 (481)
T ss_pred HHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHH
Confidence 000 0 00000 00000000000111222222 222333333333333333344556677666
Q ss_pred hhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHh---hcCCC------c
Q 014698 250 EELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSS---IDLGL------P 320 (420)
Q Consensus 250 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~------~ 320 (420)
+ .|++..+.+.......+..+++.++.+++.||+++| +.. ..+.....++..... ..... .
T Consensus 313 ~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~--------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (481)
T TIGR00879 313 N-AGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRR--------PLL-LIGAAGMAICLFVLGILGASFVTGSSKSSG 382 (481)
T ss_pred H-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcch--------HHH-HHHHHHHHHHHHHHHHHhhcccCCcccchh
Confidence 5 599998888888899999999999999999999964 222 222222222222222 11111 2
Q ss_pred HHHHHHHHHHHHHhhhhhhhhh-hhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHH
Q 014698 321 HWEIVGILTAGLALSSFALSGL-YCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYL 399 (420)
Q Consensus 321 ~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~ 399 (420)
........+.+.+.+....+.. ....+..|+++|+++.|+.+...++|++++|.+.+.+.++. ++...|++.+++.++
T Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~-~~~~~f~~~~~~~~~ 461 (481)
T TIGR00879 383 NVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESI-GVGGVFIFFGGLNVL 461 (481)
T ss_pred HHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CccceehhHHHHHHH
Confidence 2222223333333332333333 33356678899999999999999999999999999999986 688888888777777
Q ss_pred HHHHHhhhccCCCCCCC
Q 014698 400 TGTIVWLAFASSKPQNF 416 (420)
Q Consensus 400 ~~~~~~~~~~~~~~~~~ 416 (420)
+.+..+...+++++++.
T Consensus 462 ~~i~~~~~~~~~~~~~~ 478 (481)
T TIGR00879 462 GLIFVYFFLPETKGRTL 478 (481)
T ss_pred HHHHHheecccCCCCCh
Confidence 77666666666555443
No 36
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.98 E-value=5.3e-30 Score=240.23 Aligned_cols=342 Identities=13% Similarity=0.037 Sum_probs=233.5
Q ss_pred hHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCccccch
Q 014698 45 KDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSR 124 (420)
Q Consensus 45 ~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~ 124 (420)
....+++++.+++.||+++|+++..+.++++++.++.++ +++++.+++.|++.|++.+... ....+++|++|+++|++
T Consensus 82 ~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~-~~s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~rg~ 159 (476)
T PLN00028 82 SGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSL-VSSATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKIVGT 159 (476)
T ss_pred HHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhheeH
Confidence 344456788899999999999999999999999888876 8899999999999999887654 45678999999999999
Q ss_pred hhHHHHhhhhhHHHHHHhhHHHhhh---------ccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhhh
Q 014698 125 AVSFVFGGLSFGSVAGLLLAPPIIE---------NLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMK 195 (420)
Q Consensus 125 ~~~~~~~~~~~g~~~g~~l~~~l~~---------~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (420)
++++.....++|..+++.+.+.+.. ..|||+.|++.+++.++..+..+++++++|+.+.++ .++
T Consensus 160 a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~~~~~~--~~~----- 232 (476)
T PLN00028 160 ANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLGQDLPDGNYRE--LKK----- 232 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHcCcCCCCchhh--HHh-----
Confidence 9999988888888777666654432 248999999999988876666666665544321100 000
Q ss_pred hhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHH
Q 014698 196 KSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTS 275 (420)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 275 (420)
+. +.++......+++.++++++|...+..+......+....+.|.|+.+.+|+++.+++.+.+...++.+++++
T Consensus 233 ~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~ 306 (476)
T PLN00028 233 SG------TMPKDSFSKVLRYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARP 306 (476)
T ss_pred cC------ccccccHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHh
Confidence 00 000000012245677888888887777666666677788999999888899999999999999999999999
Q ss_pred hhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchH
Q 014698 276 IAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYAS 355 (420)
Q Consensus 276 ~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g 355 (420)
+.|+++||+++|+..+ .|+........+..+........ ++.......+++.+.+.+........ ...+.+++++|
T Consensus 307 ~~G~lsDr~~~r~~~~--~r~~~~~~~~~l~~i~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~g 382 (476)
T PLN00028 307 AGGYLSDVAARRFGMR--GRLWALWIVQTLGGVFCIWLGRA-NSLGAAIVVMILFSIFVQAACGATFG-IVPFVSRRSLG 382 (476)
T ss_pred hhHHHHHHHHHhcCcc--hhHHHHHHHHHHHHHHHHHhccc-chHHHHHHHHHHHHHHHHHhhhhhcc-cCcccChhhch
Confidence 9999999999763211 13333333333333322222222 22222333334444444333222222 23356678999
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhh
Q 014698 356 ILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLA 407 (420)
Q Consensus 356 ~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (420)
++.|+.+...++|+.++|.+.+ .+..++|+..|++.+++.+++.++.++.
T Consensus 383 ~~~g~~~~~g~lg~~i~~~l~~--~~~~~~y~~~f~~~~~~~~i~~~~~~~~ 432 (476)
T PLN00028 383 VISGLTGAGGNVGAVLTQLLFF--TGSSYSTETGISLMGVMIIACTLPVAFI 432 (476)
T ss_pred hhhhhhhccccHHHHHHHHHHH--hcCCccHhhHHHHHHHHHHHHHHHHHhe
Confidence 9999998877777777777654 2223578888988887777666655544
No 37
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.98 E-value=1.1e-29 Score=230.63 Aligned_cols=344 Identities=12% Similarity=0.042 Sum_probs=240.6
Q ss_pred hhhccccccchhhhhHHhHHh---hhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhh-----chHHHHHHHHHHHHhcc
Q 014698 31 WVGLRIGRRGRIYLKDTNLLE---LLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLA-----GFMPGLVLSRVLVGIGE 102 (420)
Q Consensus 31 ~l~~~~g~~~~l~~~~~~~~~---l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~r~l~G~~~ 102 (420)
+++.+.++.+.+.......++ +..+++.||+|+|+++..+.+++++.++..++ + ++++.+++.|++.|++
T Consensus 64 ~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~-a~~~~~~s~~~lli~r~l~Gig- 141 (462)
T PRK15034 64 GFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGI-AVQNPNTPFGIFIVIALLCGFA- 141 (462)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH-HHcccCCCHHHHHHHHHHHHHH-
Confidence 455555566656665555554 44566699999999999999999999998876 5 7999999999999998
Q ss_pred ccchhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhh-----h-------------ccchhHHHHHHHHHH
Q 014698 103 GVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPII-----E-------------NLGWESVFYIFGLLG 164 (420)
Q Consensus 103 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~-----~-------------~~gwr~~f~~~~~~~ 164 (420)
+..++.....+++|+|+++||+++|+.....++|..+++++...+. + ..+||.++++..++.
T Consensus 142 g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~ 221 (462)
T PRK15034 142 GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLL 221 (462)
T ss_pred HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHH
Confidence 7788999999999999999999999998777777776666654433 2 334888888888877
Q ss_pred HHHHHHhhhcccCcccCCCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhh
Q 014698 165 IAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWL 244 (420)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (420)
++..+..++..++++.++.+ ..+.++++|+|+.|...+.+++.+.++.++..++
T Consensus 222 iv~~i~~~~~~~~~~~~~~~--------------------------~~~~~~vlk~~~~Wllslly~~tFG~fvg~s~~l 275 (462)
T PRK15034 222 AIATIAAWSGMNDIASSRAS--------------------------IADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGF 275 (462)
T ss_pred HHHHHHHHHhCCCccccccC--------------------------HHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHH
Confidence 77665555554443321110 0114578999999999999999988999999999
Q ss_pred hhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHH-HHhhcCC--Cc-
Q 014698 245 PTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMT-LSSIDLG--LP- 320 (420)
Q Consensus 245 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~- 320 (420)
|.|.++.+ +............+...+.++++|+++||+|++ +............... ....+.. .+
T Consensus 276 p~~~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~--------~vl~~~~i~~~i~~~~~~l~lp~~~~~~~ 345 (462)
T PRK15034 276 AMLAKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDKFGGV--------RVTLINFIFMAIFSALLFLTLPGTGSGNF 345 (462)
T ss_pred HHHHHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCch--------HHHHHHHHHHHHHHHHHHHHhccccccHH
Confidence 99998854 333333333445677888899999999999974 2222222222222211 1111111 11
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhccCc---------------------cchHHHHHHHHHhhhhhHHHHHHHHHHH
Q 014698 321 HWEIVGILTAGLALSSFALSGLYCTHQDISP---------------------EYASILLGITNTVGAVPGIVGVALTGYL 379 (420)
Q Consensus 321 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---------------------~~~g~~~g~~~~~~~~g~~~~~~~~g~l 379 (420)
......++....+.+.......-.+.+.+|+ ++.|.+.|+......+|+++-|.+.|..
T Consensus 346 ~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~ 425 (462)
T PRK15034 346 IAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMS 425 (462)
T ss_pred HHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHH
Confidence 2222222333333343333333344344442 2678999999999999999999999999
Q ss_pred hccCCceeeeehhhhHHHHHHHHHHhhhccCCC
Q 014698 380 LDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSK 412 (420)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (420)
.+..|++...++...+..+++..+.+..+.++.
T Consensus 426 ~~~~g~~~~~~~~~~~~~~~~~~~~w~~y~r~~ 458 (462)
T PRK15034 426 LNMTGSPVGAMKVFLIFYIVCVLLTWLVYGRRK 458 (462)
T ss_pred HHHcCCcHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 999999999999998888888888777665543
No 38
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.98 E-value=3.5e-30 Score=243.52 Aligned_cols=369 Identities=15% Similarity=0.090 Sum_probs=231.8
Q ss_pred cccchhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHh-----------hchHHHHHHHHHHHHhccccc
Q 014698 37 GRRGRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLL-----------AGFMPGLVLSRVLVGIGEGVS 105 (420)
Q Consensus 37 g~~~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~~r~l~G~~~~~~ 105 (420)
+.....+.....+++++.+++.||+||||+++.+..++.++.+.+++. .++++.++++|+++|++.|..
T Consensus 58 ~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~ 137 (479)
T PRK10077 58 GFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLA 137 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHH
Confidence 333444455566678999999999999999999999998888776541 123567889999999999999
Q ss_pred hhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhh--------hccchhHHHHHHHHHHHHHHHHhhhcccC
Q 014698 106 PSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPII--------ENLGWESVFYIFGLLGIAWFSGFKILQEG 177 (420)
Q Consensus 106 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~--------~~~gwr~~f~~~~~~~~~~~~~~~~~~~~ 177 (420)
.+...++++|++|+|+|++++++.+.+..+|.++++.++..+. +.+|||+.|++.+++.++..+..+++||+
T Consensus 138 ~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~~s 217 (479)
T PRK10077 138 SMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLYFVPET 217 (479)
T ss_pred hhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 9999999999999999999999999999999999988776553 35699999999888887766667788888
Q ss_pred cccCCCCcCccchhhhhh-----hhhhhhhhhhcccc--cccchhhhhhcHHHHHH---HHHHHHhHHHHHHHhhhhhhH
Q 014698 178 ETSNGATLAPRSNYINMK-----KSLSASLEEMGESL--KDVPWKAIFRSKAVWAM---IYAHFCGSWGHYTCLSWLPTY 247 (420)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 247 (420)
+++...++++++.....+ ++.....++..+.. +....+..+........ ....+......+....+.|.+
T Consensus 218 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i 297 (479)
T PRK10077 218 PRYLMSRGKQEQAEGILRKIMGNTLATQALQEIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPEI 297 (479)
T ss_pred cHHHHHcCCHHHHHHHHHHHcCChhHHHHHHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHHH
Confidence 654222111111100000 00000000000000 00000011110000000 111111122233344566777
Q ss_pred hhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHh-h-cCC-CcHHHH
Q 014698 248 FSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSS-I-DLG-LPHWEI 324 (420)
Q Consensus 248 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~-~~~~~~ 324 (420)
.++ .|.+...........++..+++.++.++++||+++| +. ...+....+++..... . ..+ ......
T Consensus 298 ~~~-~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r--------~~-~i~~~~~~~v~~~~l~~~~~~~~~~~~~~ 367 (479)
T PRK10077 298 FKT-LGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRK--------PL-QIIGALGMAIGMFSLGTAFYTQAPGIVAL 367 (479)
T ss_pred HHH-cCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCh--------HH-HHHhHHHHHHHHHHHHHHHhcCcccHHHH
Confidence 665 588877777777788888999999999999999964 22 2333333333222221 1 111 122222
Q ss_pred HHHHHHHHHhhhh-hhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHh------ccCCceeeeehhhhHHH
Q 014698 325 VGILTAGLALSSF-ALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLL------DSTHSWSMSLFAPSIFF 397 (420)
Q Consensus 325 ~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~------~~~~~~~~~~~~~~~~~ 397 (420)
......+.+.+.. .+.......+.+|+++|+++.|+.+...+++..+++.+.+.+. |.. ++...|++.++..
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~ 446 (479)
T PRK10077 368 LSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHF-HNGFSYWIYGCMG 446 (479)
T ss_pred HHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhc-cCccHHHHHHHHH
Confidence 3333344444322 2334455667788899999999999999999999987776554 443 4556677777666
Q ss_pred HHHHHHHhhhccCCCCCCC
Q 014698 398 YLTGTIVWLAFASSKPQNF 416 (420)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~ 416 (420)
+++.++.+.+.+|+|+++.
T Consensus 447 ~~~~~~~~~~~~e~~~~~~ 465 (479)
T PRK10077 447 VLAALFMWKFVPETKGKTL 465 (479)
T ss_pred HHHHHHHHhccccCCCCCH
Confidence 6666666666666665543
No 39
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.98 E-value=8e-31 Score=238.05 Aligned_cols=312 Identities=24% Similarity=0.347 Sum_probs=232.5
Q ss_pred chhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCc
Q 014698 40 GRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPL 119 (420)
Q Consensus 40 ~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 119 (420)
.........++.++.+++.||++|||++..+.++..++.++..+ +++++.+++.|++.|++.+...+...+++.|++|+
T Consensus 38 ~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~ 116 (352)
T PF07690_consen 38 FSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAF-ASNFWLLLIARFLLGIGSGFFSPASNALIADWFPP 116 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHH-HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhh-hhhHHHHhhhccccccccccccccccccccccchh
Confidence 33344445566888888899999999999999999999666654 67888999999999999999999999999999999
Q ss_pred cccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHH-hhhcccCcccCCCCcCccchhhhhhhhh
Q 014698 120 EERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSG-FKILQEGETSNGATLAPRSNYINMKKSL 198 (420)
Q Consensus 120 ~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (420)
|+|++++++.+...++|.+++|.+++.+.+.++||+.|++.++..++..++ ..++++++++++++++++++
T Consensus 117 ~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~-------- 188 (352)
T PF07690_consen 117 EERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLPEPPPPRERESPKESE-------- 188 (352)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC---STTTT--SSTTTT--------
T ss_pred hhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhhhcccccccccccccc--------
Confidence 999999999999999999999999999999999999999999998886543 34455544433332221110
Q ss_pred hhhhhhhccccccc-chhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCC-cchhhHHHHhhHHHHHHHHHh
Q 014698 199 SASLEEMGESLKDV-PWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLN-LTEAAWVSILPPLASVLVTSI 276 (420)
Q Consensus 199 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~ 276 (420)
.+++.+.. .++++.++|.+|......+...........+.|.|+++.+|.+ ..+.+.......+..+++.++
T Consensus 189 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (352)
T PF07690_consen 189 ------SKKPKPLKPGFKSLFKNPVLWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLL 262 (352)
T ss_dssp --------HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHH
T ss_pred ------cccccccccccccccccchhhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 00001111 2567777787775555666666677778899999988889999 789999999999999999999
Q ss_pred hhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHH
Q 014698 277 AAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASI 356 (420)
Q Consensus 277 ~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~ 356 (420)
.+++.||++++ +......................++..+.....++.|++.+...+.......+..|++++|+
T Consensus 263 ~~~l~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~ 335 (352)
T PF07690_consen 263 AGRLSDRFGRR-------RRLLIAILLLILGALGLLLLPFSSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGT 335 (352)
T ss_dssp HHHHHHHTTCH-------HHHHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHH
T ss_pred HHHHHHHcCcH-------HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 99999999864 33332222222222222111112234455556677888888777777777888889999999
Q ss_pred HHHHHHHhhhhhHHHHH
Q 014698 357 LLGITNTVGAVPGIVGV 373 (420)
Q Consensus 357 ~~g~~~~~~~~g~~~~~ 373 (420)
+.|+.+...++++.++|
T Consensus 336 ~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 336 AFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCC
Confidence 99999999999999987
No 40
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.98 E-value=1.3e-29 Score=233.37 Aligned_cols=349 Identities=12% Similarity=0.085 Sum_probs=240.0
Q ss_pred hhhhccccccch---hhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHH---HhhchHHHHHHHHHHHHhccc
Q 014698 30 KWVGLRIGRRGR---IYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLP---LLAGFMPGLVLSRVLVGIGEG 103 (420)
Q Consensus 30 ~~l~~~~g~~~~---l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~r~l~G~~~~ 103 (420)
++++.+..+.+. .+.....+++++.+++.||++|||++..+..+.+++++++. ...++++.+++.|+++|++.+
T Consensus 41 ~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~ 120 (402)
T TIGR00897 41 KALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYP 120 (402)
T ss_pred HHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchH
Confidence 344444444443 34444555688888899999999999999999988876542 213578888999999999988
Q ss_pred cchhhhHHHHHhcCCccccchhhHHHHhhhhhHH-HHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccCC
Q 014698 104 VSPSAATDLIARSIPLEERSRAVSFVFGGLSFGS-VAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNG 182 (420)
Q Consensus 104 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~-~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (420)
...+...+.+.|++|+|+|++++|+.+.+.++|. +++|.+++.+.+.+||+..++.......+..+...++.+++++++
T Consensus 121 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (402)
T TIGR00897 121 LFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGVIALFSNKDIFTPQ 200 (402)
T ss_pred HHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhccCCCCCcc
Confidence 8888888889999999999999999999999997 689999999998889776665544333333333333322221111
Q ss_pred CCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHH
Q 014698 183 ATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWV 262 (420)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 262 (420)
++ ++++ +.. + .+..+++++|+|+++...+..++.....+....+.|.|+++ +|+++.+.+..
T Consensus 201 ~~-~~~~-------~~~----~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~ 262 (402)
T TIGR00897 201 HM-QTRE-------KFS----E-----LGKAATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAE-LGFSTSEWLQI 262 (402)
T ss_pred cc-cCCc-------chh----h-----HHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhHHHHH
Confidence 11 0000 000 0 01124578889999988888888888888888999999976 69999999998
Q ss_pred HHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhH--HHHHHHhh-cCCCcHHHHHHHHHHHHHhhhhhh
Q 014698 263 SILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPA--VCMTLSSI-DLGLPHWEIVGILTAGLALSSFAL 339 (420)
Q Consensus 263 ~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~ 339 (420)
.....++..++++..|+++||+++| +............ ..+..... ..++.....+..++.|.+.+...
T Consensus 263 ~~~~~~~~~ig~~~~g~l~dr~~~~-------~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~- 334 (402)
T TIGR00897 263 WGTFFFTNIVFNVIFGIVGDKLGWM-------NTVRWFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGYV- 334 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcch-------hHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHH-
Confidence 8889999999999999999999865 2221111111111 11111111 11223333444566676666443
Q ss_pred hhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhh
Q 014698 340 SGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWL 406 (420)
Q Consensus 340 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (420)
+.... ..+.+|++||++.|+.+...++++.++|.+.|.+.|.. ++...+++.+++.++..++..+
T Consensus 335 ~~~~~-~~~~~~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~-g~~~~~~~~a~~~~i~~~~~~~ 399 (402)
T TIGR00897 335 PLAAV-FPTLAPKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFF-GAIGVVWIFAALYVVSAFLTAF 399 (402)
T ss_pred HHHHH-HHhhCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-chHHHHHHHHHHHHHHHHHHHH
Confidence 23333 34567789999999999999999999999999999987 5666777766666555555443
No 41
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.98 E-value=4.2e-30 Score=237.03 Aligned_cols=316 Identities=17% Similarity=0.135 Sum_probs=232.6
Q ss_pred HHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHH--------HHHHHHHHHHhccccchhhhHHHHHhcCCcc
Q 014698 49 LLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMP--------GLVLSRVLVGIGEGVSPSAATDLIARSIPLE 120 (420)
Q Consensus 49 ~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~ 120 (420)
+++++.+++.||++|||++..+.++..++..++++ +++++ .+++.|+++|++.+...+...+++.|++|++
T Consensus 50 i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~ 128 (394)
T TIGR00883 50 LGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGL-LPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPG 128 (394)
T ss_pred hHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhh-CCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcc
Confidence 45778888899999999999999999999998876 77764 4889999999999999999999999999999
Q ss_pred ccchhhHHHHhhhhhHHHHHHhhHHHhh--------hccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhh
Q 014698 121 ERSRAVSFVFGGLSFGSVAGLLLAPPII--------ENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYI 192 (420)
Q Consensus 121 ~r~~~~~~~~~~~~~g~~~g~~l~~~l~--------~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (420)
+|++..+..+.+..+|.++++.++..+. +.++||+.|.+.++..++........+|+++.++++++
T Consensus 129 ~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 202 (394)
T TIGR00883 129 KRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLYLRRNLEETPVFEKAQEK------ 202 (394)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHhc------
Confidence 9999999999999999999998877654 35689999998877766655554555554432211100
Q ss_pred hhhhhhhhhhhhhcccccccchhhhhhcHH--HHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHH
Q 014698 193 NMKKSLSASLEEMGESLKDVPWKAIFRSKA--VWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLAS 270 (420)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 270 (420)
++.++.+.++.+++++ ++......++.....+....+.|.|+++.+|.++.+.+.......+..
T Consensus 203 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 268 (394)
T TIGR00883 203 --------------HKKKRGPIRETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILF 268 (394)
T ss_pred --------------cccccCCHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHH
Confidence 0111223456666655 666666777777777788889999998888999999999999999999
Q ss_pred HHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHH-HHHHhh-cCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhc
Q 014698 271 VLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVC-MTLSSI-DLGLPHWEIVGILTAGLALSSFALSGLYCTHQD 348 (420)
Q Consensus 271 ~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 348 (420)
.++.++.+++.||+++| +............. ...... ..++.........+.+.+.+...+.......+.
T Consensus 269 ~~~~~~~g~l~dr~g~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 340 (394)
T TIGR00883 269 FITIPLSGALSDRIGRR--------PVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPEL 340 (394)
T ss_pred HHHHHHHHHHHHHhchH--------HHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHh
Confidence 99999999999999964 22222222222222 111111 222233333444566666666666777777788
Q ss_pred cCccchHHHHHHHH-HhhhhhHHHHHHHHHHHhccCCceeeeehhh
Q 014698 349 ISPEYASILLGITN-TVGAVPGIVGVALTGYLLDSTHSWSMSLFAP 393 (420)
Q Consensus 349 ~~~~~~g~~~g~~~-~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~ 393 (420)
+|+++|+++.++.+ ....+|..++|.+.|.+.|+.+.+...++..
T Consensus 341 ~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~ 386 (394)
T TIGR00883 341 FPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYL 386 (394)
T ss_pred CCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHH
Confidence 89999999999854 4456788899999999999876565544443
No 42
>PRK10504 putative transporter; Provisional
Probab=99.97 E-value=1.3e-29 Score=238.76 Aligned_cols=326 Identities=18% Similarity=0.167 Sum_probs=238.2
Q ss_pred HHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCccccchh
Q 014698 46 DTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRA 125 (420)
Q Consensus 46 ~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 125 (420)
...++.++.+++.|+++|||++..+..+.+++.+.+++ +++++.+++.|+++|++.+...|...+++.|++|+++|+++
T Consensus 57 ~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (471)
T PRK10504 57 TVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCAL-SGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAA 135 (471)
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHH
Confidence 34456777888899999999999999999998888775 89999999999999999999999999999999999999999
Q ss_pred hHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhh-hcccCcccCCCCcCccchh-------------
Q 014698 126 VSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFK-ILQEGETSNGATLAPRSNY------------- 191 (420)
Q Consensus 126 ~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~------------- 191 (420)
.++.....++|..+||.+++.+.+..|||+.|++..+...+..+... ..|+++.... +.|....
T Consensus 136 ~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~--r~~~~~~~~~~~~~~~~~~~ 213 (471)
T PRK10504 136 MTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMPNYTMQTR--RFDLSGFLLLAVGMATLTLA 213 (471)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCccccCC--CCChHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998877666543333 3343322111 1111100
Q ss_pred --hhhhhhhhh-----------------hhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhh
Q 014698 192 --INMKKSLSA-----------------SLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEEL 252 (420)
Q Consensus 192 --~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (420)
..+...+.. ..+|.+...+..+. +++|||+++......++..........+.|.|+++..
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (471)
T PRK10504 214 LDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNNNRALFSL-KLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGL 292 (471)
T ss_pred HhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcCCCCccCH-HHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 000000000 00122222222333 5889999998888888877777777778999999878
Q ss_pred CCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHH-HHHHHHHHH
Q 014698 253 SLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHW-EIVGILTAG 331 (420)
Q Consensus 253 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g 331 (420)
|.++.+.++......++.+++.++.+++.||+++| +...............+.........+ .....++.|
T Consensus 293 g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 364 (471)
T PRK10504 293 GFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYR--------RVLVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQG 364 (471)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch--------HHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHH
Confidence 99999999999888888888889999999999864 232222222222222222222222222 233345556
Q ss_pred HHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccC
Q 014698 332 LALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDST 383 (420)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 383 (420)
++.+...........+..|+++++++.|+.++...+|..+|+.+.|.+.+..
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~ 416 (471)
T PRK10504 365 MVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLF 416 (471)
T ss_pred HHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6666566666666677889999999999999999999999999999998875
No 43
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.97 E-value=2e-29 Score=232.96 Aligned_cols=312 Identities=17% Similarity=0.138 Sum_probs=231.5
Q ss_pred hHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCccccch
Q 014698 45 KDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSR 124 (420)
Q Consensus 45 ~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~ 124 (420)
....++.++.+++.||++|||++..+.....++.....+ +++++.+++.|+++|++.+...+...+++.|++|+++|.+
T Consensus 59 ~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~-~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~ 137 (406)
T PRK15402 59 AGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILL-AQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIK 137 (406)
T ss_pred HHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH-HccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHH
Confidence 344445677888899999999999999999999888876 8999999999999999999888889999999999999999
Q ss_pred hhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHH-hhhcccCcccCCCCcCccchhhhhhhhhhhhhh
Q 014698 125 AVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSG-FKILQEGETSNGATLAPRSNYINMKKSLSASLE 203 (420)
Q Consensus 125 ~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (420)
.+++......+|..++|.+++.+.+..+||+.|++.++..++..+. ....||++++++++. + ..
T Consensus 138 ~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----------~~---- 202 (406)
T PRK15402 138 ITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETAGRVGEKL-S----------LK---- 202 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCCccccccc-c----------HH----
Confidence 9999998889999999999999999889999999988887765443 344555432211100 0 00
Q ss_pred hhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhh
Q 014698 204 EMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADN 283 (420)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr 283 (420)
+ ...++++++++|+++...+..++..........+.|.++++.+|.++.+.+.......++.+++.++.+++.||
T Consensus 203 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r 277 (406)
T PRK15402 203 E-----LGRDYKLVLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSR 277 (406)
T ss_pred H-----HHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0 01124578889998888777776666666667788999888889999999988887888889999999999999
Q ss_pred hhhcCcchHHHHHHHHHHHHHHhHHHHHHHh----hcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHH
Q 014698 284 LIATGVETTMVRKICQTIAFLSPAVCMTLSS----IDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLG 359 (420)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g 359 (420)
+++| +.. ..+............ ....+..+.....++.+.+.+...+...... ...+++++|++.+
T Consensus 278 ~~~~--------~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~-~~~~~~~~g~~~~ 347 (406)
T PRK15402 278 RPLR--------SLI-RMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLANAGLYRLT-LFSSDVSKGTVSA 347 (406)
T ss_pred cCHH--------HHH-HHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHhhhHHHHH-hhhccccccHHHH
Confidence 9864 222 222222222222211 1122233444555667777665444443333 3345689999999
Q ss_pred HHHHhhhhhHHHHHHHHHHHhccCCcee
Q 014698 360 ITNTVGAVPGIVGVALTGYLLDSTHSWS 387 (420)
Q Consensus 360 ~~~~~~~~g~~~~~~~~g~l~~~~~~~~ 387 (420)
..+..+.++..+|+.+.+.+.+..+.+.
T Consensus 348 ~~~~~~~~~~~~g~~~~~~l~~~~~~~~ 375 (406)
T PRK15402 348 AMGMLSMLIFTVGIELSKHAYLGGGNGL 375 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCCchHH
Confidence 9999999999999999999998865444
No 44
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.97 E-value=2.4e-29 Score=232.02 Aligned_cols=325 Identities=16% Similarity=0.124 Sum_probs=224.8
Q ss_pred hhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHh--h-----chHHHHHHHHHHHHhccccchhhhHHHHH
Q 014698 42 IYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLL--A-----GFMPGLVLSRVLVGIGEGVSPSAATDLIA 114 (420)
Q Consensus 42 l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~--~-----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~ 114 (420)
.......+.+.+.+.+.||+||||++..+.++..+++..+... . .+++.+++.|+++|++.+...+...+++.
T Consensus 59 ~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~ 138 (399)
T PRK05122 59 LQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGI 138 (399)
T ss_pred HHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHH
Confidence 3333444557778888999999999999999888776655431 1 25678999999999999999999999999
Q ss_pred hcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhh
Q 014698 115 RSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINM 194 (420)
Q Consensus 115 ~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (420)
|++|+|+|++++++...+..+|.++|+.+++.+.+.+|||..+++.++..++..+.....|++++ ++ .++
T Consensus 139 ~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~------ 208 (399)
T PRK05122 139 GRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGLLLARPRPAVPP---VK-GER------ 208 (399)
T ss_pred hhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCCCC---CC-ccc------
Confidence 99999999999999999999999999999999999999999988876665543333222222111 00 000
Q ss_pred hhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHH
Q 014698 195 KKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVT 274 (420)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 274 (420)
. ++++.+| +.+.......+....+.....+.|.|+++. |. .+.+.......++.++++
T Consensus 209 -~----------------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~ 266 (399)
T PRK05122 209 -L----------------PFRRVLG--RVWPYGMGLALASIGFGTIATFITLYYAAR-GW--DGAALALTLFGVAFVGAR 266 (399)
T ss_pred -h----------------hHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cc--ccchHHHHHHHHHHHHHH
Confidence 0 0112222 122222223333445556667888888764 55 345666677888889999
Q ss_pred HhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccch
Q 014698 275 SIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYA 354 (420)
Q Consensus 275 ~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 354 (420)
++.+++.||+++| +.. ..+.............. ++.....+..++.|++.+...+.......+..|+++|
T Consensus 267 ~~~g~l~~r~~~~--------~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~ 336 (399)
T PRK05122 267 LLFGNLINRLGGL--------RVA-IVSLLVEILGLLLLWLA-PSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNR 336 (399)
T ss_pred HHHHHHHHHhccH--------HHH-HHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHH
Confidence 9999999999863 222 23323333333332222 2233444455667777765555555556677899999
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhcc
Q 014698 355 SILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFA 409 (420)
Q Consensus 355 g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (420)
|++.|+.+...++|..++|.+.|.+.|.. +++..+.+.+++.+++.+......+
T Consensus 337 g~~~g~~~~~~~~g~~~~~~~~g~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~ 390 (399)
T PRK05122 337 GAALGAYSVFLDLSLGITGPLAGLVASWF-GYPSIFLAAALAALLGLALTWLLYR 390 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999986 6888888877766665555544433
No 45
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.97 E-value=6.1e-29 Score=229.12 Aligned_cols=338 Identities=13% Similarity=0.139 Sum_probs=237.3
Q ss_pred hhhhhccccccchhhhh---HHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccc
Q 014698 29 KKWVGLRIGRRGRIYLK---DTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVS 105 (420)
Q Consensus 29 ~~~l~~~~g~~~~l~~~---~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 105 (420)
..+++.+.+..+...+. ...++++..+++.||++|||++..+..++.+++++++. +++++.++++|+++|++.+..
T Consensus 43 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~-a~~~~~l~~~r~l~Gi~~~~~ 121 (413)
T PRK15403 43 VRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLF-TTSMTQFLIARFIQGTSICFI 121 (413)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHH
Confidence 34555555554444443 34446788889999999999999999999999998886 899999999999999998877
Q ss_pred hhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHH-hhhcccCcccCCCC
Q 014698 106 PSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSG-FKILQEGETSNGAT 184 (420)
Q Consensus 106 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 184 (420)
.+....++.|++|+++|++++++......+|..+||.+++.+.+..|||+.|++.++..++..+. .+.+||++++++++
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~~~~~~ 201 (413)
T PRK15403 122 ATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPETVKRGAVP 201 (413)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCccccCCC
Confidence 77778889999999999999999999999999999999999999899999999998887775443 45567754321110
Q ss_pred cCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHH
Q 014698 185 LAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSI 264 (420)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 264 (420)
.+. .+ ...++++++|||.++...+..++.....+.+..+.|.++++.+|+++.+.++...
T Consensus 202 -~~~----------~~---------~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~ 261 (413)
T PRK15403 202 -FSA----------KS---------VLRDFRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQV 261 (413)
T ss_pred -CCh----------HH---------HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHH
Confidence 000 00 0112568889999999888888878888888888999999988999999999887
Q ss_pred hhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHh--hcCCCcHHHHHHHHHHHHHhhhhhhhhh
Q 014698 265 LPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSS--IDLGLPHWEIVGILTAGLALSSFALSGL 342 (420)
Q Consensus 265 ~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 342 (420)
....+..++..+.+++.+|..++ |................... ...+..........+.+.+.+...+...
T Consensus 262 ~~~~~~~i~~~l~~~~~~~~~~~-------~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~p~~~ 334 (413)
T PRK15403 262 PVFGAVIVANAIVARFVKDPTEP-------RFIWRAVPIQLVGLALLIVGNLLWPHVWLWSVLGTSLYAFGIGLIFPTLF 334 (413)
T ss_pred HHHHHHHHHHHHHHHHhccCCch-------hHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHhHHHH
Confidence 77788888777777765443322 11111111111111111111 1122222234455556666665554444
Q ss_pred hhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHH
Q 014698 343 YCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFF 397 (420)
Q Consensus 343 ~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~ 397 (420)
.... .-.+..+|++.++.+.....+...++...+++.+. +...++...+.+.
T Consensus 335 ~~al-~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~ 386 (413)
T PRK15403 335 RFTL-FSNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFN--GGRLPFHLLAVVA 386 (413)
T ss_pred HHHh-ccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHc--CCchHHHHHHHHH
Confidence 3222 22233479999999999999999999999998877 3444555544433
No 46
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.97 E-value=2.1e-29 Score=230.83 Aligned_cols=342 Identities=12% Similarity=0.006 Sum_probs=236.9
Q ss_pred cccchhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhc
Q 014698 37 GRRGRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARS 116 (420)
Q Consensus 37 g~~~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 116 (420)
+.....+.....+...+.|++.||++|||+++.+..+++++++.+.+ +++. ++.|+++|++.+...|...+++.|+
T Consensus 41 ~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~-~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~ 116 (393)
T PRK11195 41 PLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLF-GIHP---LLAYGLVGIGAAAYSPAKYGILTEL 116 (393)
T ss_pred HHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHH-HHHH---HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334444555566788888899999999999999999998887765 5553 7899999999999999999999999
Q ss_pred CCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhhhh
Q 014698 117 IPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKK 196 (420)
Q Consensus 117 ~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (420)
+|+|+|++++++.+...++|.++||.+++.+.+. .|+..+.+.+...++..+....+||+++++++++.+...
T Consensus 117 ~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~------ 189 (393)
T PRK11195 117 LPGEKLVKANGWMEGSTIAAILLGTVLGGALADP-HAEAALAVCALIYLLAALFNLFIPRLGARRPGQSWNPIA------ 189 (393)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCCcccccccCCCHHH------
Confidence 9999999999999999999999999999999886 488888777665555555556677755332211111000
Q ss_pred hhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHh
Q 014698 197 SLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSI 276 (420)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 276 (420)
..++. +...+.++++|.+........+............|.|+++.+|.++.+.|......+++.+++++.
T Consensus 190 ----~~~~~-----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~ 260 (393)
T PRK11195 190 ----LLRDF-----FHACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGA 260 (393)
T ss_pred ----HHHHH-----HHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHH
Confidence 00000 011346777887766555555555555666677788888889999999999999999999999999
Q ss_pred hhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccc-hH
Q 014698 277 AAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEY-AS 355 (420)
Q Consensus 277 ~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~g 355 (420)
.+++.||.+++ + .. ..+...... ....... ++.+......++.|++.+....+.....++..|++. +|
T Consensus 261 ~~~l~~~~~~~-------~-~~-~~g~~~~~~-~~~~~~~-~~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g 329 (393)
T PRK11195 261 AARLVTLETVL-------R-VL-PAGILMGLV-VLLMALQ-HSLLPAYPLLILIGALGGFFVVPMNALLQHRGHVLVGAG 329 (393)
T ss_pred HHHHhcCCccc-------c-hH-HHHHHHHHH-HHHHHHH-hHHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccccch
Confidence 99999987653 2 22 222222222 2122222 223333444556777777666666666555434443 69
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhccCC
Q 014698 356 ILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASS 411 (420)
Q Consensus 356 ~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (420)
++.++.+..++++..++..+.+.+ +.. +.+..+.+.+...+.+..+.+.++.+.
T Consensus 330 ~~~a~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (393)
T PRK11195 330 HSIAVQNFNENLAMLLMLGLYSLL-VKL-GVPVVAVIVGFGLLVALAMALLWRWHR 383 (393)
T ss_pred hHHHHHhHHHHHHHHHHHHHHHHH-HHc-CCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999966 443 566666665554444444444444333
No 47
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.97 E-value=1.8e-28 Score=230.21 Aligned_cols=347 Identities=14% Similarity=0.151 Sum_probs=240.3
Q ss_pred hccccccchhhhhHHh-HHhhhhcchhhhc-----chhHH-HHHHHHHHHHHHHHHHHh--hchHHHHHHHHHHHHhccc
Q 014698 33 GLRIGRRGRIYLKDTN-LLELLRLPLLFVT-----WIRKV-LQTGVLIWSLATALLPLL--AGFMPGLVLSRVLVGIGEG 103 (420)
Q Consensus 33 ~~~~g~~~~l~~~~~~-~~~l~~~p~~~~~-----~~r~~-~~~~~~~~~~~~~~~~~~--~~~~~~l~~~r~l~G~~~~ 103 (420)
+.+.++.+.+...... ...++.+|+.||+ ||||. +..+.+...++...+++. .++++.+.+.+++.|++.+
T Consensus 43 g~~~~~ig~~~~~~~~~~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a 122 (491)
T PRK11010 43 NIDLKTIGFFSLVGQAYVFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSA 122 (491)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHH
Confidence 4444445444222222 5789999999998 87774 667777777776666553 2468889999999999999
Q ss_pred cchhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhh-ccchhHHHHHHHHHHHHHHHHhhhcccCcccCC
Q 014698 104 VSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE-NLGWESVFYIFGLLGIAWFSGFKILQEGETSNG 182 (420)
Q Consensus 104 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~-~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (420)
...+...+++.|++|+|||+++.++...+..+|.++++.++.++.+ ..|||..|++.++..++..+..++.||++++++
T Consensus 123 ~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~~~e~~~~~~ 202 (491)
T PRK11010 123 SQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATLLAPEPTDTIP 202 (491)
T ss_pred HHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHhcCCCccccc
Confidence 9999999999999999999999999999999999999999999998 579999999999887776555556666432211
Q ss_pred CCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHH
Q 014698 183 ATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWV 262 (420)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 262 (420)
+ +++. ++ ....++++++++++.+...+..++..........+.+.|+.+..|++..+.+..
T Consensus 203 ~---~~~~----~~------------~~~~~l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~ 263 (491)
T PRK11010 203 V---PKTL----EQ------------AVVAPLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLV 263 (491)
T ss_pred c---ccch----hh------------hHHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHH
Confidence 0 0000 00 001134567777777766666666666666667788888877789999999998
Q ss_pred HH-hhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHH--HHHHHhhcCCCcHHHHHHHHHHHHHhhhhhh
Q 014698 263 SI-LPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAV--CMTLSSIDLGLPHWEIVGILTAGLALSSFAL 339 (420)
Q Consensus 263 ~~-~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 339 (420)
.. ...++.+++.++.|+++||+++| | ............ .........++........++..+..+....
T Consensus 264 ~~~~g~i~~iiG~ll~G~L~dr~g~~-------~-~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~~ 335 (491)
T PRK11010 264 NKTLGLLATIVGALYGGILMQRLSLF-------R-ALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGMGTA 335 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHH-------H-HHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHH
Confidence 74 55578999999999999999964 2 222222221111 1111112212222222222332222332333
Q ss_pred hhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhh
Q 014698 340 SGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLA 407 (420)
Q Consensus 340 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (420)
.......+..+++.+++..|+.+....+|..+++.+.|.+.|.. +|+..|.+.+++.+.+.+.....
T Consensus 336 ~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~-G~~~~f~~~~~~~l~~l~~~~~~ 402 (491)
T PRK11010 336 AFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAH-GWPTFYLFSVAAAVPGLLLLLVC 402 (491)
T ss_pred HHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHH
Confidence 34445556678888999999999999999999999999999986 68877877777666665555444
No 48
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.97 E-value=1.1e-28 Score=226.70 Aligned_cols=337 Identities=15% Similarity=0.060 Sum_probs=231.7
Q ss_pred hhhhccccccchhhhhHH---hHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccch
Q 014698 30 KWVGLRIGRRGRIYLKDT---NLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSP 106 (420)
Q Consensus 30 ~~l~~~~g~~~~l~~~~~---~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~ 106 (420)
.+++.+....+.+..... .+..++.+++.||+++||++..+..+..++.+.+.. +++++.+++.|+++|++.+...
T Consensus 39 ~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~-~~~~~~l~~~~~l~g~~~~~~~ 117 (400)
T PRK11646 39 DQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAI-AHEPWLLWLSCILSGLGGTLFD 117 (400)
T ss_pred HHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHH
Confidence 334444444444443322 223577888899999999999999999999998876 8899999999999999988888
Q ss_pred hhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHH-HHhhhcccCcccCCCCc
Q 014698 107 SAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWF-SGFKILQEGETSNGATL 185 (420)
Q Consensus 107 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 185 (420)
|...+++.|++|+|+|++++++.....++|..+||.+++.+. .+|||+.|++.++..++.. +..+..||++++ ++
T Consensus 118 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~~--~~- 193 (400)
T PRK11646 118 PPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLPAYKLS--TV- 193 (400)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCCccccc--cc-
Confidence 999999999999999999999999999999999999999998 6799999999887766643 333444432110 00
Q ss_pred CccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHh
Q 014698 186 APRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSIL 265 (420)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 265 (420)
++ + .+.++++++++|+++...+..+...........+.|.|+++..+ ++.+.+.+.+.
T Consensus 194 -~~--------~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~g~l~~~ 251 (400)
T PRK11646 194 -RT--------P------------VREGMTRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDIAG-SPSAVKWMYAI 251 (400)
T ss_pred -ch--------h------------hHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhhcC-CchHHHHHHHH
Confidence 00 0 01124567788887766555544444444455688999988644 67788888777
Q ss_pred hHHHHHHHHHhhhhhhhh-hhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhh
Q 014698 266 PPLASVLVTSIAAQFADN-LIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYC 344 (420)
Q Consensus 266 ~~~~~~~~~~~~g~l~dr-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 344 (420)
.++....+....+++.|| ++. ++.. ..+.....+......... +.........+.+.+.+...+.....
T Consensus 252 ~~~~~~~~~~~~~~~~~~r~~~--------~~~~-~~~~~~~~~~~~~l~~~~-~~~~~~~~~~l~~~g~~~~~p~~~~~ 321 (400)
T PRK11646 252 EACLSLTLLYPIARWSEKRFRL--------EHRL-MAGLLIMSLSMFPIGMVS-NLQQLFTLICLFYIGSIIAEPARETL 321 (400)
T ss_pred HHHHHHHHHHHHHHHHHHhcch--------hHHH-HHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHHHccHHHH
Confidence 777666655555666554 332 2222 233333333333332222 23333333455566666555666666
Q ss_pred hhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCc---eeeeehhhhHHHHHHHHH
Q 014698 345 THQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHS---WSMSLFAPSIFFYLTGTI 403 (420)
Q Consensus 345 ~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~---~~~~~~~~~~~~~~~~~~ 403 (420)
..+..|++++|++.|+.+....+|..+||.+.|.+.|+.++ ....+...+...++..+.
T Consensus 322 ~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (400)
T PRK11646 322 SASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLA 383 (400)
T ss_pred HHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHH
Confidence 77778999999999999999999999999999999998643 344454444444444333
No 49
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.97 E-value=2.5e-28 Score=223.68 Aligned_cols=338 Identities=16% Similarity=0.060 Sum_probs=230.4
Q ss_pred hhhhccccccchhhhhHHh---HHhhhhcchhhhcchhHHHHH-HHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccc
Q 014698 30 KWVGLRIGRRGRIYLKDTN---LLELLRLPLLFVTWIRKVLQT-GVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVS 105 (420)
Q Consensus 30 ~~l~~~~g~~~~l~~~~~~---~~~l~~~p~~~~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 105 (420)
++++.+..+.+.+...... +.+.+.+.+.||++|||.++. +.....++..++++ +++++.+++.|++.|.+.+..
T Consensus 26 ~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~g~~~~~~ 104 (375)
T TIGR00899 26 EEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAW-NRNYFLLLVLGVLLSSFASTA 104 (375)
T ss_pred cccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHhhhhhh
Confidence 3444444455555444333 345666667999998887654 55555666666665 899999999999999888888
Q ss_pred hhhhHHHHHhcCCccccchh--hHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHH-hhhcccCcccCC
Q 014698 106 PSAATDLIARSIPLEERSRA--VSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSG-FKILQEGETSNG 182 (420)
Q Consensus 106 ~~~~~~~i~~~~~~~~r~~~--~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~-~~~~~~~~~~~~ 182 (420)
.|...+++.|+.|+++|++. .+....+.++|.++||.+++.+.+.+|||+.|++.++..++..+. .+++||++++++
T Consensus 105 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (375)
T TIGR00899 105 NPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWLFLPSYPRGAP 184 (375)
T ss_pred HHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhCCCcccCcc
Confidence 88888999999887777654 578888899999999999999999999999999998877665444 445676543221
Q ss_pred CCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHH
Q 014698 183 ATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWV 262 (420)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 262 (420)
+++ + ..+.++.+++|+++......++..........+.|.|+++.+|.++.+.+..
T Consensus 185 ~~~-~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 240 (375)
T TIGR00899 185 GAL-T-----------------------RLEVRGLLASRDTRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLM 240 (375)
T ss_pred ccc-C-----------------------cchhhhhhcCcchHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHH
Confidence 110 0 0012235566766665555555555555566788999988889999999988
Q ss_pred HHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhh
Q 014698 263 SILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGL 342 (420)
Q Consensus 263 ~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 342 (420)
........+++.++.+++.||+++| + .. ................. ++.........+.+++.+...+...
T Consensus 241 ~~~~~~~~~~~~~~~g~l~~r~g~~-------~-~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~g~~~~~~~ 310 (375)
T TIGR00899 241 MGTAAGLEIPFMLLAGYLIKRFGKR-------R-LM-LLAALAGVAFYTGLAAD-NSLWALLMLQLLNAIFIGILAGIGM 310 (375)
T ss_pred HHHHHHHHHHHHHhHHHHHHHhcch-------h-HH-HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8777777888889999999999865 2 22 22222222222222222 1223333334455666664444444
Q ss_pred hhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHH
Q 014698 343 YCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIV 404 (420)
Q Consensus 343 ~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (420)
.... +..|++++++.++.+...++|..++|.+.|.+.|.. +++..+.+.+++.+++.+..
T Consensus 311 ~~~~-~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~-g~~~~~~~~~~~~~~~~~~~ 370 (375)
T TIGR00899 311 LYFQ-DLMPGRAGAATTLYTNTGRVGWIIAGSVGGILAERW-SYHAVYWFAIVMLIVALFCL 370 (375)
T ss_pred HHHH-HhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cchhHHHHHHHHHHHHHHHH
Confidence 4444 444566789999999999999999999999999986 68878877766555554443
No 50
>PRK11043 putative transporter; Provisional
Probab=99.97 E-value=2.7e-28 Score=225.15 Aligned_cols=309 Identities=12% Similarity=0.133 Sum_probs=227.8
Q ss_pred chhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCc
Q 014698 40 GRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPL 119 (420)
Q Consensus 40 ~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 119 (420)
..+......++.++.+++.||++||+++..+..+..++.+...+ +++++.+++.|+++|++.+...+...+++.|++|+
T Consensus 47 ~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~ 125 (401)
T PRK11043 47 LSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLW-VESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPA 125 (401)
T ss_pred HHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCc
Confidence 33444455567899999999999999999999999999888876 89999999999999999888888888999999999
Q ss_pred cccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhhhhhhh
Q 014698 120 EERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLS 199 (420)
Q Consensus 120 ~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (420)
+++++..+.......+|..++|.+++++.+.+|||+.|++.++..++..+..++++|++++++++ +
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---------- 191 (401)
T PRK11043 126 QKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRLKPSKKARKQS----Q---------- 191 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCCCCccccc----h----------
Confidence 99999999999999999999999999999999999999998888777665556666554321100 0
Q ss_pred hhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhh
Q 014698 200 ASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQ 279 (420)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~ 279 (420)
++.++++++|+|+++...+...+....++....+.|.++++ +|+++.+.++......++.+++.+..++
T Consensus 192 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~g~~~~~~ 260 (401)
T PRK11043 192 ----------DALTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILEQ-MGYSPADIGLSYVPQTIAFLVGGYGCRA 260 (401)
T ss_pred ----------HHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 01124577888888766655555566666777888998876 6999999998888888888899999999
Q ss_pred hhhhhhhcCcchHHHHHHH-HHHHHHHhHHHHHHHhh-cCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHH
Q 014698 280 FADNLIATGVETTMVRKIC-QTIAFLSPAVCMTLSSI-DLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASIL 357 (420)
Q Consensus 280 l~dr~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~ 357 (420)
+.||++++ +... ................. ..++.........+.+.+.+...+.......+.. |+++|++
T Consensus 261 l~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~ 332 (401)
T PRK11043 261 ALQKWGGE-------QLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAANGAIYPIVVAQALRPF-PQATGKA 332 (401)
T ss_pred HHHHcCHH-------HHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhC-cccChHH
Confidence 99999864 2111 11111111111111111 1222222333345556666655555544444444 5689999
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHhcc
Q 014698 358 LGITNTVGAVPGIVGVALTGYLLDS 382 (420)
Q Consensus 358 ~g~~~~~~~~g~~~~~~~~g~l~~~ 382 (420)
.|+.+.....++..++.+.|.+.|.
T Consensus 333 ~g~~~~~~~~~~~~~~~~~g~l~~~ 357 (401)
T PRK11043 333 AALQNTLQLGLCFLASLLVSALIST 357 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCC
Confidence 9999999999999999999999875
No 51
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.97 E-value=4.1e-28 Score=223.04 Aligned_cols=323 Identities=18% Similarity=0.177 Sum_probs=232.2
Q ss_pred hhhhhccccccc---hhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccc
Q 014698 29 KKWVGLRIGRRG---RIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVS 105 (420)
Q Consensus 29 ~~~l~~~~g~~~---~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 105 (420)
.++++.+....+ ..+.....++.++.+++.||++|||++..+..+..++.+...+ +++++.+++.|++.|++.+..
T Consensus 32 ~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~g~~~~~~ 110 (385)
T TIGR00710 32 AADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLAL-SNNIETLLVLRFVQAFGASAG 110 (385)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHH-HccHHHHHHHHHHHHcchhHH
Confidence 344544443333 3334445566888888999999999999999999999988876 899999999999999999999
Q ss_pred hhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHH-hhhcccCcccCCCC
Q 014698 106 PSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSG-FKILQEGETSNGAT 184 (420)
Q Consensus 106 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 184 (420)
.+...+++.|++|+++|++++++.+....+|..++|.+++.+.+..+||+.|++.++..++..+. .+..||++++++++
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (385)
T TIGR00710 111 SVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPETLPYEARI 190 (385)
T ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcccC
Confidence 99999999999999999999999999999999999999999999899999999988877665443 34455543322110
Q ss_pred cCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHH
Q 014698 185 LAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSI 264 (420)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 264 (420)
+. + + ...++++.+|+|+++...+...+.....+....+.|.++++.+|.++.+.+.+..
T Consensus 191 ---~~------~---~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~ 249 (385)
T TIGR00710 191 ---QI------S---T---------YFETFLLLLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFA 249 (385)
T ss_pred ---CH------H---H---------HHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHH
Confidence 00 0 0 0112456778888888877777777777778888999998888999999999999
Q ss_pred hhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHH-hhcCCCcH-HHHHHHHHHHHHhhhhhhhhh
Q 014698 265 LPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLS-SIDLGLPH-WEIVGILTAGLALSSFALSGL 342 (420)
Q Consensus 265 ~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~ 342 (420)
...++.+++.++.+++.||+++| +.................. ........ .......+.|.+.+...+...
T Consensus 250 ~~~~~~~~~~~~~g~l~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 322 (385)
T TIGR00710 250 LNIIAMIFGGFLNGRFIKKWGAK-------SLLRMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGIGNSMISSIAM 322 (385)
T ss_pred HHHHHHHHHHHHHHHHHHhcCHH-------HHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999864 2222211111111111111 11111122 223334555666665555555
Q ss_pred hhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhc
Q 014698 343 YCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLD 381 (420)
Q Consensus 343 ~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 381 (420)
....++. |++++++.++.+.....++.+.+.+.+.+.+
T Consensus 323 ~~~~~~~-~~~~g~~~~~~~~~~~~~g~i~~~~~~~~~~ 360 (385)
T TIGR00710 323 AYALEDF-PHVAGTASALFGTLRLVLGAIVGYLVSLIHG 360 (385)
T ss_pred HHHhccC-cccchHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 5444544 5789999999999888766676767774433
No 52
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.97 E-value=5e-29 Score=236.62 Aligned_cols=342 Identities=16% Similarity=0.109 Sum_probs=220.4
Q ss_pred hhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCcccc
Q 014698 43 YLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEER 122 (420)
Q Consensus 43 ~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 122 (420)
......++.++.+++.||+||||++..+.++.+++.++.++ +++++.+++.|++.|++.+...+....++.|++|+++|
T Consensus 64 ~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r 142 (496)
T PRK03893 64 AFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGF-APGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLR 142 (496)
T ss_pred HHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHH
Confidence 33444456778888899999999999999999999998886 89999999999999999999999999999999999999
Q ss_pred chhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhhhhhhhhhh
Q 014698 123 SRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASL 202 (420)
Q Consensus 123 ~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (420)
++++++...+.++|..++|.+++.+.+.++||+.|++..+..++.......+||+++.+++++.+.+.....+.......
T Consensus 143 ~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (496)
T PRK03893 143 NKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILPIIFALWLRKNLPEAEDWKEKHAGKAPVRTMVDILYRGEH 222 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhCCCchhhhhhccccccchhHHHHHhcchh
Confidence 99999999999999999999999999999999999876554444444444556554322111111000000000000000
Q ss_pred hhh---------------cccccccchh-------------------hhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHh
Q 014698 203 EEM---------------GESLKDVPWK-------------------AIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYF 248 (420)
Q Consensus 203 ~~~---------------~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (420)
+.. ........+. +..+.+.........+......+....++|.|+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l 302 (496)
T PRK03893 223 RIINILLTLAAAAALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYL 302 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHH
Confidence 000 0000000000 000001111111111111111223456899999
Q ss_pred hhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHH-HHH
Q 014698 249 SEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEI-VGI 327 (420)
Q Consensus 249 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 327 (420)
++.+|++..+.+.+.+...++.+++.++.|++.||+++| +... .+.....+.........+...+.. ...
T Consensus 303 ~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~--------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (496)
T PRK03893 303 KTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTR--------KAYV-CSLLISQLLIIPVFAIGGANVWVLGLLL 373 (496)
T ss_pred HhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch--------HHHH-HHHHHHHHHHHHHhhccccHHHHHHHHH
Confidence 877899999999999999999999999999999999864 2222 222222222222222222222222 222
Q ss_pred HHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhH
Q 014698 328 LTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSI 395 (420)
Q Consensus 328 ~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~ 395 (420)
+..+...............+..|+++|++++|+.+....+|+.++|.+.|.+.|.. ++...+...+.
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~-g~~~~~~~~~~ 440 (496)
T PRK03893 374 FFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRL-DLGTALASLSF 440 (496)
T ss_pred HHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccC-ChHHHHHHHHH
Confidence 22222222223333445566788899999999999999999999999999999987 56655544443
No 53
>PRK12382 putative transporter; Provisional
Probab=99.97 E-value=2.8e-28 Score=224.36 Aligned_cols=334 Identities=14% Similarity=0.053 Sum_probs=224.8
Q ss_pred hhhhccccccchhhhhHHh---HHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHH---H----hhchHHHHHHHHHHHH
Q 014698 30 KWVGLRIGRRGRIYLKDTN---LLELLRLPLLFVTWIRKVLQTGVLIWSLATALLP---L----LAGFMPGLVLSRVLVG 99 (420)
Q Consensus 30 ~~l~~~~g~~~~l~~~~~~---~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~---~----~~~~~~~l~~~r~l~G 99 (420)
++++.+..+.+.+.+.+.. +.+.+.+++.||++|||++..+.+...++.+... . ..++++.+++.|+++|
T Consensus 44 ~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 123 (392)
T PRK12382 44 HDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILG 123 (392)
T ss_pred HhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHH
Confidence 4455555555555444443 3466778889999999999999887776554321 1 1357889999999999
Q ss_pred hccccchhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcc
Q 014698 100 IGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGET 179 (420)
Q Consensus 100 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~ 179 (420)
++.+...+...+++.|++|+|+|++++++.+.+.+.|..+||++++.+.+.+|||..+.+..+..++........||+++
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (392)
T PRK12382 124 FGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLAWAFNGTVRKVPA 203 (392)
T ss_pred HHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHhccCCCC
Confidence 99998888889999999999999999999999999999999999999999899998877655544333222222222211
Q ss_pred cCCCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchh
Q 014698 180 SNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEA 259 (420)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 259 (420)
++ +++ . +.++.+| .++...+...+..........+.|.|+++. +.+ +.
T Consensus 204 ~~-----~~~------~----------------~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~--~~ 251 (392)
T PRK12382 204 HA-----GER------P----------------SLWSVVG--LIWKPGLGLALQGVGFAVIGTFVSLYFASK-GWA--MA 251 (392)
T ss_pred Cc-----ccC------c----------------hHHHHHH--HHHHhHHHHHHHHHHHhHHHHHHHHHHHhc-CCc--hh
Confidence 10 000 0 0111111 111111122233344555667888888764 654 35
Q ss_pred hHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhh
Q 014698 260 AWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFAL 339 (420)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 339 (420)
+.......++.++++++.|++.||+++|+ ... .+.....+......... +........++.+.+.+...+
T Consensus 252 ~~~~~~~~~~~~~~~~~~g~l~~r~g~~~-------~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~~ 321 (392)
T PRK12382 252 GFTLTAFGGAFVLMRVLFGWMPDRFGGVK-------VAI--VSLLVETVGLLLLWLAP-TAWVALAGAALTGAGCSLIFP 321 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCe-------ehH--HHHHHHHHHHHHHHHcc-cHHHHHHHHHHHHHHHHhHHH
Confidence 56666777788899999999999999752 222 22222222332322222 233444455666777665555
Q ss_pred hhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhh
Q 014698 340 SGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWL 406 (420)
Q Consensus 340 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (420)
.......+..|+++||++.|+.+...++|..++|.+.|.+.|+. +++..|.+.+++.+++....+.
T Consensus 322 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~-g~~~~~~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 322 ALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSF-GYPSVFLAGAISAVLGIIVTIL 387 (392)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHHh
Confidence 55556667789999999999999999999999999999999986 6888888877766655555443
No 54
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.97 E-value=5.4e-28 Score=221.29 Aligned_cols=316 Identities=12% Similarity=0.040 Sum_probs=220.8
Q ss_pred hhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCccc
Q 014698 42 IYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEE 121 (420)
Q Consensus 42 l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~ 121 (420)
.+.....+++++.+++.||++|||++..+.++.+++...++. ++|++.+++.|+++|++.+...+...+.+.|..++++
T Consensus 49 ~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~ 127 (381)
T PRK03633 49 SYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGL-MVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRN 127 (381)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH
Confidence 333344556778888899999999999999999999988876 8999999999999999999888888888889999999
Q ss_pred cchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhhhhhhhhh
Q 014698 122 RSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSAS 201 (420)
Q Consensus 122 r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (420)
|+++++....+.++|..+||.+++.+.+...|+..+. .+......... .+.+.++++++++
T Consensus 128 ~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~----------------- 188 (381)
T PRK03633 128 RGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLPWV-TGLVLAAILPL-LFTRILNQQAENH----------------- 188 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccccchHHHH-HHHHHHHHHHH-HHhcccCCCCCCC-----------------
Confidence 9999999999999999999999999877643333332 22222211111 1212111110000
Q ss_pred hhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhh
Q 014698 202 LEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFA 281 (420)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~ 281 (420)
+..+.++.+|+|.++......+.....+.....++|.|+++. |.++.+.+...+...++.+++++..+++.
T Consensus 189 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~-g~s~~~~g~~~~~~~~~~~~~~~~~g~l~ 259 (381)
T PRK03633 189 --------DSTSIWPMLKLRQARLGVNGCIISGIVLGSLYGLMPLYLNHQ-GMSDASIGFWMALLVSAGILGQWPIGRLA 259 (381)
T ss_pred --------CCCCHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 001234567777777654444444445556667899999874 99999999998999999999999999999
Q ss_pred hhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHH
Q 014698 282 DNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGIT 361 (420)
Q Consensus 282 dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 361 (420)
||+++| + ....+.....+...... . .........+.+.+.....+.......+..|+++++...+..
T Consensus 260 dr~~~~--------~-~l~~~~~~~~~~~~~~~-~---~~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 326 (381)
T PRK03633 260 DRFGRL--------L-VLRVQVFVVILGSIAML-S---QAAMAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQAL 326 (381)
T ss_pred HHcCcH--------H-HHHHHHHHHHHHHHHHh-h---hHHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHH
Confidence 999864 2 22222222222222221 1 112223334455554445555555566777888888888888
Q ss_pred HHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHH
Q 014698 362 NTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLT 400 (420)
Q Consensus 362 ~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~ 400 (420)
+...++|+.++|.+.|.+.|+. ++...|.+.+.+.++.
T Consensus 327 ~~~~~lG~~igp~~~G~l~~~~-g~~~~f~~~~~~~l~~ 364 (381)
T PRK03633 327 LLSYTVGSLLGPSFTAMLMQNY-SDNLLFIMIASVSFIY 364 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-CccHHHHHHHHHHHHH
Confidence 8889999999999999999986 5777777765554433
No 55
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.97 E-value=4.1e-28 Score=224.78 Aligned_cols=329 Identities=13% Similarity=0.103 Sum_probs=231.9
Q ss_pred HHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCccccchh
Q 014698 46 DTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRA 125 (420)
Q Consensus 46 ~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 125 (420)
...++..+.+++.||++||+++..+.....++..+... +++++.+++.|++.|++.+ ..+....++.|++|+++|+++
T Consensus 66 ~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~ 143 (408)
T PRK09874 66 FSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGL-AQNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWA 143 (408)
T ss_pred HHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHH
Confidence 33445677788899999999999999999998888775 8899999999999999854 567778899999999999999
Q ss_pred hHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHH-hhhcccCcccCCCCcCccchhhhhhhhhhhhhhh
Q 014698 126 VSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSG-FKILQEGETSNGATLAPRSNYINMKKSLSASLEE 204 (420)
Q Consensus 126 ~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (420)
+++...+..+|..++|.+++.+.+..+||+.|++.++..++..+. ..+.+|++++.++++ + .+ .+
T Consensus 144 ~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------~~----~~- 209 (408)
T PRK09874 144 LGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIRENFQPVSKKE-M--------LH----MR- 209 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccCcccccchh-h--------hH----HH-
Confidence 999999999999999999999999899999999988877665443 344454432211110 0 00 00
Q ss_pred hcccccccchhhhhhcHHHHHH-HHHHHHhHHHHHHHhhhhhhHhhhhhCCCcc---hhhHHHHhhHHHHHHHHHhhhhh
Q 014698 205 MGESLKDVPWKAIFRSKAVWAM-IYAHFCGSWGHYTCLSWLPTYFSEELSLNLT---EAAWVSILPPLASVLVTSIAAQF 280 (420)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~g~l 280 (420)
+..+.+++|+++.. ................+.|.|.++..+.... ..+.+....+++.+++.+..|++
T Consensus 210 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l 281 (408)
T PRK09874 210 --------EVVTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKL 281 (408)
T ss_pred --------HHHHhCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 01234456665443 2233333444445566788888775332221 23555566777888889999999
Q ss_pred hhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHH
Q 014698 281 ADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGI 360 (420)
Q Consensus 281 ~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 360 (420)
.||+++| +.. ..+.....+........ ++.....+..++.|++.+...+.......+..|++++|+..++
T Consensus 282 ~dr~g~~-------~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 351 (408)
T PRK09874 282 GDRIGPE-------KIL--ITALIFSVLLLIPMSFV-QTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSY 351 (408)
T ss_pred Hhccccc-------hhH--HHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehH
Confidence 9999865 222 22222223322222222 2234444455667877776666666666677888999999999
Q ss_pred HHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhcc
Q 014698 361 TNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFA 409 (420)
Q Consensus 361 ~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (420)
.+....+|..++|.+.|.+.|.. +++..|.+.+++.+++.+..+...+
T Consensus 352 ~~~~~~~g~~~gp~~~G~l~~~~-g~~~~f~~~~~~~l~~~~~~~~~~~ 399 (408)
T PRK09874 352 NQSFRDIGNVTGPLMGAAISANY-GFRAVFLVTAGVVLFNAVYSWNSLR 399 (408)
T ss_pred HHHHHHHHHHhhHHHHHHHHhhc-chhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999986 7888888887777666665554443
No 56
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.97 E-value=1e-27 Score=220.68 Aligned_cols=300 Identities=15% Similarity=0.128 Sum_probs=206.1
Q ss_pred HHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCccccchh
Q 014698 46 DTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRA 125 (420)
Q Consensus 46 ~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 125 (420)
...++.++.+.+.||++|||++..+..+..++...... +++++.+++.|+++|++.+...+...+++.|++|+++|+++
T Consensus 50 ~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~-~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~ 128 (392)
T PRK10473 50 GMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSL-AETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKV 128 (392)
T ss_pred HHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHH
Confidence 44455777888899999999999999999999988875 88999999999999999999899999999999999999999
Q ss_pred hHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHH-HHhhhcccCcccCCCCcCccchhhhhhhhhhhhhhh
Q 014698 126 VSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWF-SGFKILQEGETSNGATLAPRSNYINMKKSLSASLEE 204 (420)
Q Consensus 126 ~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (420)
+++.+....+|..++|.+++.+.+..+||+.|++.++..++.. +....+||++++++++ +..
T Consensus 129 ~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~--------------- 191 (392)
T PRK10473 129 LSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKETRPARAPA--ASS--------------- 191 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCCCCCcccCC--ccc---------------
Confidence 9999999999999999999998888899999999888776644 3445566654322111 000
Q ss_pred hcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhh
Q 014698 205 MGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNL 284 (420)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~ 284 (420)
.....++.+|+|+++...+...+..........+.|.++++.+|+++.+.+......+++.+++.++.+++.||+
T Consensus 192 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~ 266 (392)
T PRK10473 192 -----KPRENSESLLNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIF 266 (392)
T ss_pred -----hHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 000123566788777665555554455555666778888888899999999999999999999999999999999
Q ss_pred hhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHh
Q 014698 285 IATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTV 364 (420)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 364 (420)
++| +. ...+................ .........+.+.+.+....... ..+..|.++++ |..+..
T Consensus 267 g~~--------~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~g~~~~~~~~~--~~~~~~~~~~~---g~~~~~ 331 (392)
T PRK10473 267 KPR--------TL-MLTSQVLFLAAGITLALSPS-HAVSLFGITLICAGFSVGFGVAM--SQALGPFSLRA---GVASST 331 (392)
T ss_pred CHH--------HH-HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhHHHH--HHHhccCcccc---cHHHHH
Confidence 864 22 22332222222222222211 22222222333333332222221 12223433332 333344
Q ss_pred hhhhHHHHHHHHHHHhccC
Q 014698 365 GAVPGIVGVALTGYLLDST 383 (420)
Q Consensus 365 ~~~g~~~~~~~~g~l~~~~ 383 (420)
..++..+++.+.+.+.+..
T Consensus 332 ~~~~~~~g~~~~~~l~~~~ 350 (392)
T PRK10473 332 LGIAQVCGSSLWIWLAAVL 350 (392)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 4566677777777777765
No 57
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.97 E-value=6.3e-28 Score=217.86 Aligned_cols=365 Identities=13% Similarity=0.071 Sum_probs=259.7
Q ss_pred hhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHH--hhchHHHHHHHHHHHHhccccchhhhHHHHHhcCC
Q 014698 41 RIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPL--LAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIP 118 (420)
Q Consensus 41 ~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~ 118 (420)
..+..+.++|+.+.++++|++|||..+.++.++..++.++..+ ..++++.++++|++.|+..+........++.|..|
T Consensus 67 s~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP 146 (485)
T KOG0569|consen 67 SIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISP 146 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcCh
Confidence 3455667778999999999999999998888887777665543 36889999999999999999999999999999999
Q ss_pred ccccchhhHHHHhhhhhHHHHHHhhHH--HhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCC-cCccchhhh--
Q 014698 119 LEERSRAVSFVFGGLSFGSVAGLLLAP--PIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGAT-LAPRSNYIN-- 193 (420)
Q Consensus 119 ~~~r~~~~~~~~~~~~~g~~~g~~l~~--~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-- 193 (420)
++.||......+.+..+|.+++..++. .+.+.-.|++.+....+++++..+...++||+|++.-.+ ++++++...
T Consensus 147 ~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~ 226 (485)
T KOG0569|consen 147 KNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKGDEEEARKALK 226 (485)
T ss_pred hhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHHHHHHHHH
Confidence 999999999999999999999977763 344555799999999999999999999999999875442 222221100
Q ss_pred -------hhhhhh---hhh-hhhcccccccchhhhhhcHHHHHHHHH----HHH-hHHHHHHHhhhhhhHhhhhhCCCcc
Q 014698 194 -------MKKSLS---ASL-EEMGESLKDVPWKAIFRSKAVWAMIYA----HFC-GSWGHYTCLSWLPTYFSEELSLNLT 257 (420)
Q Consensus 194 -------~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~g~~~~ 257 (420)
.+++.. +.. ++..++.+..++++++++|..+.-... .+. ...+.+....|...++++ .|++..
T Consensus 227 ~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~-aG~~~~ 305 (485)
T KOG0569|consen 227 FYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKT-AGFTPE 305 (485)
T ss_pred HHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHH-cCCCHH
Confidence 011111 111 111222356678899998765543222 222 223344455566666666 499999
Q ss_pred hhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHH----hhcCCCcH---HHHHHHHHH
Q 014698 258 EAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLS----SIDLGLPH---WEIVGILTA 330 (420)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~---~~~~~~~~~ 330 (420)
++.+.....++...+.++++.++.||.||| ..++..........+++. .......+ ..+...+..
T Consensus 306 ~a~~an~~~g~v~~~~t~~~~~lid~~gRR--------pLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~ 377 (485)
T KOG0569|consen 306 EAQYANLGIGIVNLLSTLVSPFLIDRLGRR--------PLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLF 377 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCc--------HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 999999999999999999999999999975 222222222222111111 11111011 112333444
Q ss_pred HHHhhhh-hhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhcc
Q 014698 331 GLALSSF-ALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFA 409 (420)
Q Consensus 331 g~~~~~~-~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (420)
.++++.. .+.......|.+|++.|+.+.++......+..++-...+..+.+..|+ ..|+.+.+.+++..+..+...+
T Consensus 378 ~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~--~~filF~i~~~~~~i~~~~~lP 455 (485)
T KOG0569|consen 378 IISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP--YVFILFVIPLAIFLIYLYRYLP 455 (485)
T ss_pred HHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--hhhHHHHHHHHHHHHHHHHhCc
Confidence 4444433 344444556668999999999999999999999999999999999876 4677777888888889999999
Q ss_pred CCCCCCC
Q 014698 410 SSKPQNF 416 (420)
Q Consensus 410 ~~~~~~~ 416 (420)
|+|+++.
T Consensus 456 ETkgr~~ 462 (485)
T KOG0569|consen 456 ETKGRTP 462 (485)
T ss_pred ccCCCCH
Confidence 9987753
No 58
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.97 E-value=2e-27 Score=217.79 Aligned_cols=307 Identities=18% Similarity=0.190 Sum_probs=217.3
Q ss_pred hhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCccc
Q 014698 42 IYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEE 121 (420)
Q Consensus 42 l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~ 121 (420)
.......++.++.+++.||++||+++..+..+..++...+.+ +++++.+++.|++.|++.+...+...+++.|++|+++
T Consensus 34 ~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~ 112 (377)
T PRK11102 34 AYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACAL-AQTIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEE 112 (377)
T ss_pred HHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHH-HccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH
Confidence 344445566888888899999999999999999999998876 8999999999999999999999999999999999999
Q ss_pred cchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHH-HHhhhcccCcccCCCCcCccchhhhhhhhhhh
Q 014698 122 RSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWF-SGFKILQEGETSNGATLAPRSNYINMKKSLSA 200 (420)
Q Consensus 122 r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (420)
|++++++.+....+|..++|.+++.+.+..+||+.|++.++..++.. ...++.||+++++++++.+. ++
T Consensus 113 ~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~ 182 (377)
T PRK11102 113 FSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFIPETLPKERRQPFHL----------RT 182 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCCccCcccccCCCCh----------HH
Confidence 99999999999999999999999999998999999999888777654 44455666543221111000 00
Q ss_pred hhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhh
Q 014698 201 SLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQF 280 (420)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l 280 (420)
...++++.+++|+++...+..++.....+....+.|.++.+.+|+++.+.+.......+..+++.++.+++
T Consensus 183 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l 253 (377)
T PRK11102 183 ---------TIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRF 253 (377)
T ss_pred ---------HHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 01124567888888877777777666777777788888888889999999999999999999999999999
Q ss_pred hhhhhhcCcchHHHHHHHHHHHHH--HhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHH
Q 014698 281 ADNLIATGVETTMVRKICQTIAFL--SPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILL 358 (420)
Q Consensus 281 ~dr~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~ 358 (420)
.||+++| + ........ ....................+.....+.+.+.......... .+..|++++++.
T Consensus 254 ~~r~g~~-------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~ 324 (377)
T PRK11102 254 VRRVGAL-------N-MLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVGCVSMISSNAMAVI-LDEFPHMAGTAS 324 (377)
T ss_pred HHHhCHH-------H-HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHH-hccccccchHHH
Confidence 9999964 2 22211111 11111111111111122222222233333332333333333 344558899999
Q ss_pred HHHHHhhh-hhHHHHHHHHH
Q 014698 359 GITNTVGA-VPGIVGVALTG 377 (420)
Q Consensus 359 g~~~~~~~-~g~~~~~~~~g 377 (420)
++.+.... ++..+++.+.+
T Consensus 325 ~~~~~~~~~~g~~~g~~~~~ 344 (377)
T PRK11102 325 SLAGTLRFGIGAIVGALLSL 344 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 99877654 55556665543
No 59
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.97 E-value=2.3e-27 Score=215.24 Aligned_cols=309 Identities=28% Similarity=0.371 Sum_probs=253.8
Q ss_pred chhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCc
Q 014698 40 GRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPL 119 (420)
Q Consensus 40 ~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 119 (420)
.........++.++.+++.||.+|||.+..+..+..++...... .++++.+++.|++.|++.+...+...+++.|++|+
T Consensus 40 ~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~ 118 (352)
T cd06174 40 VSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAF-ASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPP 118 (352)
T ss_pred HHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHcccccccHhHHHHHHHhCCc
Confidence 33444445556788888899999999999999999999998876 79999999999999999999999999999999999
Q ss_pred cccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhhhhhhh
Q 014698 120 EERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLS 199 (420)
Q Consensus 120 ~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (420)
|+|++.+++.+...++|..++|.+++.+.+..+||+.+++.++..++..+...+++
T Consensus 119 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------ 174 (352)
T cd06174 119 KERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFLL------------------------ 174 (352)
T ss_pred cchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH------------------------
Confidence 99999999999999999999999999999998999999998888777655555444
Q ss_pred hhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhh
Q 014698 200 ASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQ 279 (420)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~ 279 (420)
|+++...+..++..........+.|.+.++.+|.+..+.+.......++..++.++.++
T Consensus 175 ---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 233 (352)
T cd06174 175 ---------------------RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGL 233 (352)
T ss_pred ---------------------HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566667777778888888899999999887999999999999999999999999999
Q ss_pred hhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHH
Q 014698 280 FADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLG 359 (420)
Q Consensus 280 l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g 359 (420)
+.||+++| ++ ....+.....+......... +.........+.+.+.+...+.......+..|+++|++..|
T Consensus 234 ~~~~~~~~-------~~-~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (352)
T cd06174 234 LSDRLGRR-------RL-LLLIGLLLAALGLLLLALAP-SLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASG 304 (352)
T ss_pred HHHHHHhh-------hH-HHHHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHH
Confidence 99999964 21 33344444444444333332 24445556677788888777777777888888899999999
Q ss_pred HHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHH
Q 014698 360 ITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIV 404 (420)
Q Consensus 360 ~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (420)
+.+...+++..++|.+.|.+.|.. +++..+.+.+++.+++.+..
T Consensus 305 ~~~~~~~~~~~i~~~i~g~l~~~~-~~~~~~~~~~~~~~i~~i~~ 348 (352)
T cd06174 305 LFNTFGSLGGALGPLLAGLLLDTG-GYGGVFLILAALALLAALLL 348 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccc-CcchHHHHHHHHHHHHHHHh
Confidence 999999999999999999999875 78888888777666555443
No 60
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.96 E-value=5.1e-27 Score=216.11 Aligned_cols=309 Identities=15% Similarity=0.112 Sum_probs=226.9
Q ss_pred hhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCcc
Q 014698 41 RIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLE 120 (420)
Q Consensus 41 ~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~ 120 (420)
........++.++.+++.||++|||++..+..+..++.+.... +++++.+++.|++.|++.+...+....+..|.++++
T Consensus 50 ~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 128 (394)
T PRK11652 50 AAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALF-AHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGT 128 (394)
T ss_pred HHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHH-HccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHH
Confidence 3444455566888899999999999999999999999988875 899999999999999998888888888999999999
Q ss_pred ccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHH-HHhhhcccCcccCCCCcCccchhhhhhhhhh
Q 014698 121 ERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWF-SGFKILQEGETSNGATLAPRSNYINMKKSLS 199 (420)
Q Consensus 121 ~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (420)
+++++++....+..+|..++|.+++.+.+..|||+.|++.++..++.. +..++.||+++.++++. +
T Consensus 129 ~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~-- 195 (394)
T PRK11652 129 QLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETRPADARRT-----------R-- 195 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccCccccchh-----------H--
Confidence 999999999999999999999999999998899999999887766543 34455666543211100 0
Q ss_pred hhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhh
Q 014698 200 ASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQ 279 (420)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~ 279 (420)
.+.++++++|+|+++...+..+...........+.|.++++.+|+++.+.++......++.+++..+.++
T Consensus 196 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~ 265 (394)
T PRK11652 196 ----------VLASYRTLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGR 265 (394)
T ss_pred ----------HHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0112456777888877666555555555566667888998888999999998888888888888888888
Q ss_pred hhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhc-CCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHH
Q 014698 280 FADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSID-LGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILL 358 (420)
Q Consensus 280 l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~ 358 (420)
+.||.++ +..................... ..+.........+.+.+.+...+.......+.. |+++|++.
T Consensus 266 l~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~g~~~ 336 (394)
T PRK11652 266 PNKRFST--------LMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPF-PYLAGTAG 336 (394)
T ss_pred HHHHHHH--------HHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cccchHHH
Confidence 8888763 2222222222222222222211 122333344456667777765666665555555 46889999
Q ss_pred HHHHHhhhhhHHHHHHHHHHHhcc
Q 014698 359 GITNTVGAVPGIVGVALTGYLLDS 382 (420)
Q Consensus 359 g~~~~~~~~g~~~~~~~~g~l~~~ 382 (420)
++.+....+|+.+++.+.+.+.+.
T Consensus 337 ~~~~~~~~lg~~~~~~~~~~~~~~ 360 (394)
T PRK11652 337 ALLGGLQNIGSGLAALLSAMLPQT 360 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCC
Confidence 999999999999999999987665
No 61
>PRK10133 L-fucose transporter; Provisional
Probab=99.96 E-value=4.9e-27 Score=217.51 Aligned_cols=334 Identities=12% Similarity=0.093 Sum_probs=234.0
Q ss_pred hhhhhccccccchhh---hhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHH--HhhchHHHHHHHHHHHHhccc
Q 014698 29 KKWVGLRIGRRGRIY---LKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLP--LLAGFMPGLVLSRVLVGIGEG 103 (420)
Q Consensus 29 ~~~l~~~~g~~~~l~---~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~r~l~G~~~~ 103 (420)
..+++.+..+.+.+. .....++++..+++.||+||||++..+..+++++++++. ..+++++.++++|+++|+|.+
T Consensus 53 ~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g 132 (438)
T PRK10133 53 QQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLG 132 (438)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 455555544444443 344555688888889999999999999999999997752 237899999999999999999
Q ss_pred cchhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhh------------------c--------cchhHHH
Q 014698 104 VSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE------------------N--------LGWESVF 157 (420)
Q Consensus 104 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~------------------~--------~gwr~~f 157 (420)
...+..++++.|+.|+++|.+.+++.+..+.+|..++|.+++.+.. . .+||++|
T Consensus 133 ~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f 212 (438)
T PRK10133 133 CLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHSLVLSVQTPY 212 (438)
T ss_pred HHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhHHHHHHHHHHHHHHHH
Confidence 9999999999998877777778999999999999999999876541 0 2566677
Q ss_pred HHHHHHH-HHHHHH-hhhcccCcccCCCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHH
Q 014698 158 YIFGLLG-IAWFSG-FKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSW 235 (420)
Q Consensus 158 ~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (420)
+...... ++..+. ....||.++++ + .+++ +.....+.++++|+|.++...+..++...
T Consensus 213 ~~~~~v~~~~~~~~~~~~~p~~~~~~--~-~~~~-----------------~~~~~~~~~~ll~~~~~~~~~l~~~~~~~ 272 (438)
T PRK10133 213 MIIVAIVLLVALLIMLTKFPALQSDN--H-SDAK-----------------QGSFSASLSRLARIRHWRWAVLAQFCYVG 272 (438)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCccc--c-cccc-----------------ccchhhhHHHHHhCchHHHHHHHHHHHHH
Confidence 6544333 232222 22233321110 0 0000 00001124578889998887777777777
Q ss_pred HHHHHhhhhhhHh-hhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHh
Q 014698 236 GHYTCLSWLPTYF-SEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSS 314 (420)
Q Consensus 236 ~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (420)
..+....|.+.|+ ++.+|+++.+++.......++.++++++.+++.||+++| +.. ..+.......+.+..
T Consensus 273 ~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~--------~~l-~~~~~~~~~~~~~~~ 343 (438)
T PRK10133 273 AQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPH--------KVL-AAYALIAMALCLISA 343 (438)
T ss_pred HHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH--------HHH-HHHHHHHHHHHHHHH
Confidence 7777788899885 667899999999999999999999999999999999964 222 222323223222222
Q ss_pred hcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhh
Q 014698 315 IDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPS 394 (420)
Q Consensus 315 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~ 394 (420)
.... . .....+.+.|++.+...+.......+..| ++.+++.++.. ....|+.++|.+.|.+.|..|+.+..|++..
T Consensus 344 ~~~~-~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~-~~~~~as~l~~-~~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~ 419 (438)
T PRK10133 344 FAGG-H-VGLIALTLCSAFMSIQYPTIFSLGIKNLG-QDTKYGSSFIV-MTIIGGGIVTPVMGFVSDAAGNIPTAELIPA 419 (438)
T ss_pred HcCC-h-HHHHHHHHHHHHHHHHHHHHHHHHHcccc-hhhccchhHHh-HHhccchHHHHHHHHHHHhccchHHHHHHHH
Confidence 2222 2 33445667888888888888877777654 45677888876 4557899999999999998743566666543
Q ss_pred H
Q 014698 395 I 395 (420)
Q Consensus 395 ~ 395 (420)
+
T Consensus 420 ~ 420 (438)
T PRK10133 420 L 420 (438)
T ss_pred H
Confidence 3
No 62
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.96 E-value=1.3e-28 Score=225.56 Aligned_cols=353 Identities=16% Similarity=0.186 Sum_probs=245.2
Q ss_pred hhhccccccchhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhH
Q 014698 31 WVGLRIGRRGRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAAT 110 (420)
Q Consensus 31 ~l~~~~g~~~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 110 (420)
.-+++++...+++...+.++.+..+.++||....+.+....+++++.+++.+. .+|++.+++.|++.|+.++..+|...
T Consensus 78 ~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~-~~s~~~~ialr~llGl~es~~wP~~~ 156 (495)
T KOG2533|consen 78 LVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAA-VHSFPGLIALRFLLGLFESGGWPGVV 156 (495)
T ss_pred hhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHHHhcccchHHH
Confidence 34556777888888888888999999999999999999999999999988876 89999999999999999999999999
Q ss_pred HHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhh------hccchhHHHHHHHHHHHHH-HHHhhhcccCcccCCC
Q 014698 111 DLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPII------ENLGWESVFYIFGLLGIAW-FSGFKILQEGETSNGA 183 (420)
Q Consensus 111 ~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~------~~~gwr~~f~~~~~~~~~~-~~~~~~~~~~~~~~~~ 183 (420)
.+++.|+.++||++.++++.+..++|.++|.+++..+. ...||||.|.+.+++.++. ++..+++|++|.+. .
T Consensus 157 ~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~-~ 235 (495)
T KOG2533|consen 157 AILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKA-W 235 (495)
T ss_pred HHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChhhc-c
Confidence 99999999999999999999999999999999998863 3569999999999998885 46666777776533 1
Q ss_pred CcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHH
Q 014698 184 TLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVS 263 (420)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 263 (420)
-..++|+....++....+.++..++.++..+++.+++|.+|...+..++.....+++.+|+|.++++..|++..++..+.
T Consensus 236 fl~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls 315 (495)
T KOG2533|consen 236 FLTDEEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLS 315 (495)
T ss_pred ccchHHHHHHHHHHHhccCCCcccccCHHHHHHHHhchhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhcccc
Confidence 11111111111111111111111224556678999999999999999999999999999999999986679999999999
Q ss_pred HhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhh
Q 014698 264 ILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLY 343 (420)
Q Consensus 264 ~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 343 (420)
.+..++++++.+++|.++||.... ...|........+............ +.........+....+..........
T Consensus 316 ~~~~~~g~v~~i~ag~lsdr~~~~----~~~~~~~~~~~~~~~~~g~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (495)
T KOG2533|consen 316 TPYDVGGIVGLILAGYLSDRLKTI----FARRLLFIVFLCLYAIIGAISLLAA-AVLPGAYGAFLIGPYGLIATAIIALS 390 (495)
T ss_pred chHHhhhHHHHHHHHHHHHHHhhh----HHHHHHHHHHHHHHHHHHHHHHHhh-ccchHHhHHHHhcchhhHHHHHHHHh
Confidence 999999999999999999996300 0003333333333333332333322 22333333333333333333333334
Q ss_pred hhhhccCc-cchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeee
Q 014698 344 CTHQDISP-EYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSL 390 (420)
Q Consensus 344 ~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~ 390 (420)
...+...+ .++-+..+......+.++.++|.+.-....-...+...|
T Consensus 391 w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~y~~~~~f 438 (495)
T KOG2533|consen 391 WTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDAPRYGWGAVF 438 (495)
T ss_pred hccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccCcchhhhhHH
Confidence 44444444 334444555455555555555544432222111445555
No 63
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.96 E-value=2.1e-27 Score=215.50 Aligned_cols=311 Identities=16% Similarity=0.156 Sum_probs=227.3
Q ss_pred chhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCc
Q 014698 40 GRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPL 119 (420)
Q Consensus 40 ~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 119 (420)
..+......++.+..+.+.||+++||++..+.++..++.+.. . .++++.+++.|++.|++.+...+....++.|++|
T Consensus 41 ~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~-~~~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~- 117 (355)
T TIGR00896 41 TALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-S-APGTALLFAGTALIGVGIAIINVLLPSLIKRDFP- 117 (355)
T ss_pred HHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-H-hccHHHHHHHHHHHHHHHHHHhccchHHHHHhCc-
Confidence 334445555667788888999999999999998888877766 4 7888999999999999999888888889999986
Q ss_pred cccchhhHHHHhhhhhHHHHHHhhHHHhhhcc--chhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhhhhh
Q 014698 120 EERSRAVSFVFGGLSFGSVAGLLLAPPIIENL--GWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKS 197 (420)
Q Consensus 120 ~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~--gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (420)
++|++++++.+.+.++|..+++.+++.+.+.. +||+.|...++..++... .++|+.++++++++.
T Consensus 118 ~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~--~~~~~~~~~~~~~~~----------- 184 (355)
T TIGR00896 118 QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLALL--AWIPQVRRRVAANQT----------- 184 (355)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHH--HHhhhhccccCCCCC-----------
Confidence 68999999999999999999999998888764 399999877665443322 234443321111000
Q ss_pred hhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhh
Q 014698 198 LSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIA 277 (420)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 277 (420)
.++.+.++++|+|.++...+..++....++....++|.|+++ .|.++.+.+...+...++.++++++.
T Consensus 185 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~ 252 (355)
T TIGR00896 185 -----------TTRLTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASALLI 252 (355)
T ss_pred -----------CCCCCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhH
Confidence 001123567888988887777777777788888899999987 59999999999999999999999999
Q ss_pred hhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccC-ccchHH
Q 014698 278 AQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDIS-PEYASI 356 (420)
Q Consensus 278 g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~g~ 356 (420)
|++.||+++| |+.. ..+......+........++... ....+.|++.+...+.......++.+ ++++++
T Consensus 253 g~l~dr~~~~-------~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~ 322 (355)
T TIGR00896 253 PALARRVKDQ-------RGIV-AVLAVLQLVGLCGLLFAPMHGLW--AWALVLGLGQGGAFPLALTLIGLRSRQAAQAAA 322 (355)
T ss_pred HHHHhhhccc-------hHHH-HHHHHHHHHHHHHHHHhhhhHHH--HHHHHHHHhhhhHhHHHHHHHHHhccCHHHHHH
Confidence 9999999653 3222 22323333232222222222221 23456677777666555555544444 567899
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHhccCCceee
Q 014698 357 LLGITNTVGAVPGIVGVALTGYLLDSTHSWSM 388 (420)
Q Consensus 357 ~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~ 388 (420)
..++.+...+++..++|.+.|.+.|+.|+|..
T Consensus 323 ~~~~~~~~~~~~~~~gp~~~G~l~~~~g~~~~ 354 (355)
T TIGR00896 323 LSAMAQSIGYLLAALGPLFVGVLHDISGNWLM 354 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC
Confidence 99999999999999999999999999877653
No 64
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.96 E-value=1.4e-26 Score=212.71 Aligned_cols=336 Identities=14% Similarity=0.038 Sum_probs=212.4
Q ss_pred hhhhhccccccchhhhhHHhHH----hhhhcchhhhcchhHHH-HHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccc
Q 014698 29 KKWVGLRIGRRGRIYLKDTNLL----ELLRLPLLFVTWIRKVL-QTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEG 103 (420)
Q Consensus 29 ~~~l~~~~g~~~~l~~~~~~~~----~l~~~p~~~~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 103 (420)
.++++.+....+.+.......+ .+.+++ .||+++||.+ ..+.+..+++..+.++ +++++.+++.+.+.|...+
T Consensus 43 ~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~ 120 (393)
T PRK15011 43 TDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAW-NRNYFVLLFVGVFLSSFGS 120 (393)
T ss_pred HhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHH
Confidence 4445555555555544333333 333333 8999988764 5556666677766665 8888887666655554456
Q ss_pred cchhhhHHHHHhcCCcccc--chhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHH-HHhhhcccCccc
Q 014698 104 VSPSAATDLIARSIPLEER--SRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWF-SGFKILQEGETS 180 (420)
Q Consensus 104 ~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~-~~~~~~~~~~~~ 180 (420)
...|...+++.|+.++++| +...++.+.+.++|.++||++++.+.+.+|||..|++.++..++.. ....++||++++
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 200 (393)
T PRK15011 121 TANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMRKE 200 (393)
T ss_pred hhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcCccCCC
Confidence 7788888889998876655 3445788899999999999999999999999999999988777654 444456665432
Q ss_pred CCCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhh
Q 014698 181 NGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAA 260 (420)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 260 (420)
+++++.+ .++ .++ +.+..+...............+..+.|.|+++.+|+++.+.+
T Consensus 201 ~~~~~~~--------------~~~---------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g 255 (393)
T PRK15011 201 LPLATGT--------------LEA---------PRR--NRRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAG 255 (393)
T ss_pred Ccccccc--------------ccc---------ccc--ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH
Confidence 2111000 000 000 012222333333444445555667899999888899999999
Q ss_pred HHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhh
Q 014698 261 WVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALS 340 (420)
Q Consensus 261 ~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 340 (420)
.+.+...+..+++.++.|+++||+++| + .. ..+............. .++........++.+...+.....
T Consensus 256 ~~~~~~~~~~i~~~~~~G~l~dr~g~~-------~-~~-~~~~~~~~~~~~~~~~-~~~~~~~l~~~~l~~~~~g~~~~~ 325 (393)
T PRK15011 256 VMMGTAAGLEIPTMLIAGYFAKRLGKR-------F-LM-RVAAVAGVCFYAGMLM-AHSPAILLGLQLLNAIYIGILGGI 325 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhChH-------H-HH-HHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHH
Confidence 888877788888999999999999975 2 22 2222222222222222 222333333333333443333333
Q ss_pred hhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHH
Q 014698 341 GLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTI 403 (420)
Q Consensus 341 ~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 403 (420)
...... +..|++++++.++.+...++|..++|.+.|.+.|.. +++..+.+.+++.+++...
T Consensus 326 ~~~~~~-~~~p~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~-g~~~~~~~~~~~~~~~~~~ 386 (393)
T PRK15011 326 GMLYFQ-DLMPGQAGSATTLYTNTSRVGWIIAGSLAGIVAEIW-NYHAVFWFALVMIIATLFC 386 (393)
T ss_pred HHHHHH-HhCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHH
Confidence 333333 444567999999999999999999999999999986 6777777655554444433
No 65
>TIGR00895 2A0115 benzoate transport.
Probab=99.96 E-value=1.4e-27 Score=220.55 Aligned_cols=325 Identities=23% Similarity=0.262 Sum_probs=229.4
Q ss_pred hhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCcccc
Q 014698 43 YLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEER 122 (420)
Q Consensus 43 ~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 122 (420)
......++.++.+++.||++||+++..+..+..++.++... +++++.+++.|++.|++.+...+...+++.|++|+++|
T Consensus 61 ~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r 139 (398)
T TIGR00895 61 GLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCAL-ATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFR 139 (398)
T ss_pred HHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHH-ccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhh
Confidence 33444556778888899999999999999999998888875 88999999999999999999999999999999999999
Q ss_pred chhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHH-HHHHhhhcccCcccCCCCcCccchhhhhhhhhh--
Q 014698 123 SRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIA-WFSGFKILQEGETSNGATLAPRSNYINMKKSLS-- 199 (420)
Q Consensus 123 ~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 199 (420)
++++++...+..+|..+++.+++.+.+..|||..|++.++..++ ..+...++||+++...+++.++......+....
T Consensus 140 ~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (398)
T TIGR00895 140 GTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQ 219 (398)
T ss_pred chhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999998765555 445556667665432221111100000000000
Q ss_pred -h---hhhhh-ccc-ccccchhhhhh---cHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHH
Q 014698 200 -A---SLEEM-GES-LKDVPWKAIFR---SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLAS 270 (420)
Q Consensus 200 -~---~~~~~-~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 270 (420)
+ ...+. .+. ..+...+.+++ ++..+...+..++.....+....+.|.+. +.+|.++.+.+.......++.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~ 298 (398)
T TIGR00895 220 AEAQSALPEQKATQGTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKLM-VELGFSLSLAATGGALFNFGG 298 (398)
T ss_pred ccccccccccccccchhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHH
Confidence 0 00000 000 01111122222 23344444455555666677777888444 557999999999999999999
Q ss_pred HHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccC
Q 014698 271 VLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDIS 350 (420)
Q Consensus 271 ~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 350 (420)
+++.++.+++.||+++| ...............+.. ...+........++.|++.+...+.......+..|
T Consensus 299 ~~~~~~~~~l~~~~~~~---------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 368 (398)
T TIGR00895 299 VIGSIIFGWLADRLGPR---------VTALLLLLGAVFAVLVGS-TLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYP 368 (398)
T ss_pred HHHHHHHHHHHhhcchH---------HHHHHHHHHHHHHHHHHH-HhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 99999999999999852 222222222222222222 12234444555677788887777777777778889
Q ss_pred ccchHHHHHHHHHhhhhhHHHHHHHHHHH
Q 014698 351 PEYASILLGITNTVGAVPGIVGVALTGYL 379 (420)
Q Consensus 351 ~~~~g~~~g~~~~~~~~g~~~~~~~~g~l 379 (420)
+++|+++.|+.+....+|..++|.+.|.+
T Consensus 369 ~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 369 TAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 99999999999999999999999999875
No 66
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.96 E-value=1.3e-27 Score=248.04 Aligned_cols=330 Identities=11% Similarity=0.035 Sum_probs=240.4
Q ss_pred hhhhHHhHHhhhhcchhhhcchhHHHHH---HHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCC
Q 014698 42 IYLKDTNLLELLRLPLLFVTWIRKVLQT---GVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIP 118 (420)
Q Consensus 42 l~~~~~~~~~l~~~p~~~~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~ 118 (420)
.+.....+.+.+.|.+.||++|||++.. ..+...+... .++..++++.++++|+++|++.+...|+..+++.|++|
T Consensus 60 ~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~-~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~ 138 (1140)
T PRK06814 60 VFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAI-YGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLN 138 (1140)
T ss_pred HHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHH-HHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcC
Confidence 3444455567788888999999997533 2222333222 23335889999999999999999999999999999999
Q ss_pred ccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhhhhhh
Q 014698 119 LEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSL 198 (420)
Q Consensus 119 ~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (420)
+++|++++|+.+++.++|.++||++++++.+..+|++.|...++..++..+..+++|++++.....+.+...
T Consensus 139 ~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 210 (1140)
T PRK06814 139 KDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLGWLASLFIPKTGNAAPDLKIDRNI-------- 210 (1140)
T ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCCeeccch--------
Confidence 999999999999999999999999999999999999999555555555556666677654332211111000
Q ss_pred hhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhh
Q 014698 199 SASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAA 278 (420)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g 278 (420)
.. + ....++.+.++|.++...+..++.++.......++|.|+++.+|.++.+.|++.+..+++.+++.++.|
T Consensus 211 ~~---~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g 282 (1140)
T PRK06814 211 IR---S-----TITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLAS 282 (1140)
T ss_pred HH---H-----HHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0 011256778899999988888888888888888999999999999999999999999999999999999
Q ss_pred hhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHh------------------hcCCCcHHHHHHHHHHHHHhhhhhhh
Q 014698 279 QFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSS------------------IDLGLPHWEIVGILTAGLALSSFALS 340 (420)
Q Consensus 279 ~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~g~~~~~~~~~ 340 (420)
++.||..+++ ......+......+.+.. ....+.+...+..+++|++.+....+
T Consensus 283 ~l~~~~~~~~--------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 354 (1140)
T PRK06814 283 KLSEGRITLL--------YVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVP 354 (1140)
T ss_pred HHhCCceeee--------eehHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHH
Confidence 9998766542 111111111111111111 01123344455567778888877777
Q ss_pred hhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHH
Q 014698 341 GLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIF 396 (420)
Q Consensus 341 ~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~ 396 (420)
.....++..|++.+|+++|+.+++..++..+++.+.|.+.+...++...+++.+.+
T Consensus 355 ~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~ 410 (1140)
T PRK06814 355 LFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWIILFIALA 410 (1140)
T ss_pred HHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 77888888999999999999999999999999999999986544555555544443
No 67
>PRK10054 putative transporter; Provisional
Probab=99.96 E-value=7.4e-28 Score=220.77 Aligned_cols=350 Identities=10% Similarity=0.008 Sum_probs=238.6
Q ss_pred hhhccccccchhhhh---HHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchh
Q 014698 31 WVGLRIGRRGRIYLK---DTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPS 107 (420)
Q Consensus 31 ~l~~~~g~~~~l~~~---~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~ 107 (420)
+++-+..+.+.+... ...+.++..+.+.||.++||++..+.++..++.+..++ +++++.+++.|.+.|.+.+...+
T Consensus 37 ~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~ 115 (395)
T PRK10054 37 QYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPL-VNNVTLVVLFFALINCAYSVFST 115 (395)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHH
Confidence 334333444444333 33344677777899999999999999999888888876 88899999999999988777788
Q ss_pred hhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHH-HHhhhcccCcccCCCCcC
Q 014698 108 AATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWF-SGFKILQEGETSNGATLA 186 (420)
Q Consensus 108 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 186 (420)
...++..|..|+++|++++++.....++|.+++|.+++.+.+ .+||..|++.++..++.. ...+++||+++++++++
T Consensus 116 ~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~- 193 (395)
T PRK10054 116 VLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFIQIWVQRSEKAIATET- 193 (395)
T ss_pred HHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHHHHHHhccccccccch-
Confidence 889999999999999999999999999999999999998875 699999998887776654 33444565543221110
Q ss_pred ccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhh--hCCCcchhhHHHH
Q 014698 187 PRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEE--LSLNLTEAAWVSI 264 (420)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~ 264 (420)
+ + ..+.++.+|+|+++...+..++..+.......+.+.|..+. .+.+....+....
T Consensus 194 --~------~--------------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 251 (395)
T PRK10054 194 --G------S--------------VWSPSVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLP 251 (395)
T ss_pred --h------h--------------hhhhhhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHH
Confidence 0 0 00124677889988887777776666666666777776543 3455556677777
Q ss_pred hhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhh
Q 014698 265 LPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYC 344 (420)
Q Consensus 265 ~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 344 (420)
...+.....+...+++.||.++| .....+...............++.+...+.....+++.+...+.....
T Consensus 252 ~~~~~~~~~~~~~g~~~~~~~~~---------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~ 322 (395)
T PRK10054 252 VNAAMVVSLQYSVGRRLNAANIR---------PLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYML 322 (395)
T ss_pred hhhhheeeehhHHHHHHccCCch---------hHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 77777777777888999998753 222333333333333232222223333445566677766555555555
Q ss_pred hhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhccCCCCCCCCCC
Q 014698 345 THQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSKPQNFSTR 419 (420)
Q Consensus 345 ~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (420)
+.+..|++.++++.+..+ ...+|..+||.++|.+.|+. ++...+.+.+.+..+.. ....++.+.++|.++
T Consensus 323 ~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~-g~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 392 (395)
T PRK10054 323 IDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTL-PPWSLFVILALAIVAAW---LLMLKGMRARPWGQP 392 (395)
T ss_pred HHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHc-ChhhHHHHHHHHHHHHH---HHHHhccccCcccCC
Confidence 666678899999998755 67789999999999999997 66656655433332222 222255566666554
No 68
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.96 E-value=1.2e-26 Score=212.26 Aligned_cols=333 Identities=12% Similarity=-0.025 Sum_probs=238.1
Q ss_pred hhhhhccccccchhhhhHHh---HHhhhhcchhhhcchhH----HHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhc
Q 014698 29 KKWVGLRIGRRGRIYLKDTN---LLELLRLPLLFVTWIRK----VLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIG 101 (420)
Q Consensus 29 ~~~l~~~~g~~~~l~~~~~~---~~~l~~~p~~~~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 101 (420)
..+++.+..+.+.+.+.... +.+.+.+|+.||++||+ ++..+..++.+ .... .+++++.+++.|.++|.+
T Consensus 31 l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~--~~~~-~~~~~~~l~~~~~l~~~~ 107 (382)
T TIGR00902 31 LKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA--AFSA-GAHNAWLLFIAIGLFALF 107 (382)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH--HHHH-hhhhHHHHHHHHHHHHHH
Confidence 34455555555555444333 34667888899998643 33333323322 1222 378899999999999999
Q ss_pred cccchhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccC
Q 014698 102 EGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSN 181 (420)
Q Consensus 102 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~ 181 (420)
.+...|...++..|+ +++|++..|......++|.+++|++++.+.+.+|||..|++.+....+.. ....++|+++++
T Consensus 108 ~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~~~~-~~~~~~~~~~~~ 184 (382)
T TIGR00902 108 FSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLAFML-IGFLIKPTIPPK 184 (382)
T ss_pred HccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHH-HHHHcCCCCCCC
Confidence 888899988887765 47899999999999999999999999999999999999988765533333 333344432221
Q ss_pred CCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhH
Q 014698 182 GATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAW 261 (420)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 261 (420)
++++ ++ +..+..+.++++|+|+++...+..++..........+.|.|+++ .|.++.+.|.
T Consensus 185 ~~~~-~~------------------~~~~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~ 244 (382)
T TIGR00902 185 DAIP-ED------------------ESQGDSAFIALLKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASATGL 244 (382)
T ss_pred cccc-cc------------------ccccchhHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHH
Confidence 1110 00 00011235688999999999988888888888889999999987 6999999999
Q ss_pred HHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhh
Q 014698 262 VSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSG 341 (420)
Q Consensus 262 ~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 341 (420)
......++.++...+.+++.||+++| ..+..+.....+........ ++.+.......+.|+..+...+..
T Consensus 245 l~~~~~~~~i~~~~~~~~l~~r~g~~---------~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~q~l~g~~~~~~~~~~ 314 (382)
T TIGR00902 245 LWGIGVLAEIIIFAFSNKLFQNCSAR---------DLLLISAIACVGRWAIIGAI-EAFPLIFLLQILHCGTFAVCHLAA 314 (382)
T ss_pred HHHHHHHHHHHHHHHhHHHHhhCCHH---------HHHHHHHHHHHHHHHHHHhH-hhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998899999999999999999853 33445555555554444432 234445555688888888777777
Q ss_pred hhhhhhccCccchHHHHHHHHH-hhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHH
Q 014698 342 LYCTHQDISPEYASILLGITNT-VGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLT 400 (420)
Q Consensus 342 ~~~~~~~~~~~~~g~~~g~~~~-~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~ 400 (420)
...+.+. |+++++++.++++. ...+|..++|.+.|.+.|+. +. ..|...+.+.+++
T Consensus 315 ~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~-g~-~~~~~~~~~~~~~ 371 (382)
T TIGR00902 315 MRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTL-GA-GTFVFMAIIAAAA 371 (382)
T ss_pred HHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cH-HHHHHHHHHHHHH
Confidence 7777665 88899999999874 56799999999999999997 44 4566655554433
No 69
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.96 E-value=7.6e-27 Score=215.20 Aligned_cols=331 Identities=14% Similarity=0.116 Sum_probs=220.0
Q ss_pred hHHhhhhcchhhhc-----chh-HHHHHHHHHHHHHHHHHHHhh--chHHHHHHHHHHHHhccccchhhhHHHHHhcCCc
Q 014698 48 NLLELLRLPLLFVT-----WIR-KVLQTGVLIWSLATALLPLLA--GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPL 119 (420)
Q Consensus 48 ~~~~l~~~p~~~~~-----~~r-~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 119 (420)
.+...+.+|+.||+ +|| +++..+..+.+++.....+.. ++++.+.+..++.++..+...+...+++.|++|+
T Consensus 46 ~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~ 125 (402)
T PRK11902 46 YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHP 125 (402)
T ss_pred HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence 46789999999999 655 478888888877777666521 4577788888888888889999999999999999
Q ss_pred cccchhhHHHHhhhhhHHHHHHhhHHHhhhc-cchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhhhhhh
Q 014698 120 EERSRAVSFVFGGLSFGSVAGLLLAPPIIEN-LGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSL 198 (420)
Q Consensus 120 ~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~-~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (420)
|||+++.++...+.++|.++++.++..+.+. +|||..|++.++..++..+...+.||+++++++++ +.
T Consensus 126 ~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~~~~~~e~~~~~~~~~--~~--------- 194 (402)
T PRK11902 126 EERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALTTLWAPEPEVPARPPR--SL--------- 194 (402)
T ss_pred hhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHhcCCCcccccccc--hh---------
Confidence 9999999999999999999999999999885 59999999988887765555566666543221110 00
Q ss_pred hhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhH-HHHHHHHHhh
Q 014698 199 SASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPP-LASVLVTSIA 277 (420)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~ 277 (420)
.+ ..+.++++++|||.++...+..++..........+.+.++.+.+|+++.+.+++....+ ++.+++.++.
T Consensus 195 ~~--------~~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~ 266 (402)
T PRK11902 195 GE--------AVVGPLRDFFSRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAG 266 (402)
T ss_pred HH--------HHHHHHHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHH
Confidence 00 01123567889999888777666655554444445556677778999999998876655 4688999999
Q ss_pred hhhhhhhhhcCcchHHHHHHHHHHHHHHhHH--HHHHHhhcCCCcHHHHHHHH----HHHHHhhhhhhhhhhhhhhccCc
Q 014698 278 AQFADNLIATGVETTMVRKICQTIAFLSPAV--CMTLSSIDLGLPHWEIVGIL----TAGLALSSFALSGLYCTHQDISP 351 (420)
Q Consensus 278 g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~ 351 (420)
+++.||+++| + ............ .+.......++.+....... ..++..+.........+.+..|.
T Consensus 267 g~l~~r~g~~-------~-~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 338 (402)
T PRK11902 267 GTLMVRLGLY-------R-SLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSA 338 (402)
T ss_pred HHHHHHHhHH-------H-HHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcH
Confidence 9999999864 2 222222221111 11111222222222222222 23333333333333344444444
Q ss_pred cchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhccC
Q 014698 352 EYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFAS 410 (420)
Q Consensus 352 ~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (420)
+ ..+..+....++...++.+.|.+.|.. ++...|...+.+.+++..+.+...++
T Consensus 339 ~----~~~~~~~~~~l~~~~~~~~~G~l~~~~-G~~~~f~~~~~~~~~~~~~~~~~~~~ 392 (402)
T PRK11902 339 T----QYALLSALASVGRVYVGPTSGYLVEAY-GWPGFYLMTVVIALPGLALLWLMRGT 392 (402)
T ss_pred H----HHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 3 445566666777877778999999997 68777777766665555554444433
No 70
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.96 E-value=1.2e-26 Score=214.88 Aligned_cols=347 Identities=18% Similarity=0.209 Sum_probs=264.3
Q ss_pred hhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHH-HHHHHHHhccccchhhhHHHHHhcCCccccchhhHHH
Q 014698 51 ELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLV-LSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFV 129 (420)
Q Consensus 51 ~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~ 129 (420)
..+...+.+|++.|++.+.|.++.+++.++.++ ++++|.++ ..-++.|+|.+..+..+..++..+++ |+|+.+.|+.
T Consensus 98 gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF-~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~-kkR~lA~Gia 175 (509)
T KOG2504|consen 98 GPLVSALCNRFGCRTVMIAGGLVAALGLLLSSF-ATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFE-KKRALATGIA 175 (509)
T ss_pred ccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHhhccchhhhcchhhhhhhHhH-HHHHHHHhhh
Confidence 444444589999999999999999999999987 88887655 46689999999999999999998886 8899999999
Q ss_pred HhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccC-CC--------------CcCc-----cc
Q 014698 130 FGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSN-GA--------------TLAP-----RS 189 (420)
Q Consensus 130 ~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~-~~--------------~~~~-----~~ 189 (420)
.++.++|..+-|.+..++.+.+|||+.+++.+.+.+-..+......+..+.. +. ...+ .+
T Consensus 176 ~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (509)
T KOG2504|consen 176 VSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPLSPPKKPNEEKDLRNSAASVESTPKPVELRISE 255 (509)
T ss_pred hccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCchhhhhhcccccccccccccccccccc
Confidence 9999999999999999999999999999999888866554444444422211 10 0000 00
Q ss_pred hhhhhhh---hhhhhhhhhcc-----cccccch---hhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcch
Q 014698 190 NYINMKK---SLSASLEEMGE-----SLKDVPW---KAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTE 258 (420)
Q Consensus 190 ~~~~~~~---~~~~~~~~~~~-----~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 258 (420)
+.....+ ......++.++ ..+.... .+++|+|.++...+...+...++.....++|.|..+ .|++..+
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~-~g~~~~~ 334 (509)
T KOG2504|consen 256 RDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKS-LGLSSND 334 (509)
T ss_pred CCCCCCcccccchhhhhhCCccccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCChhh
Confidence 0000000 00000000000 1111111 588999999999999999999999999999999995 5999999
Q ss_pred hhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhh
Q 014698 259 AAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFA 338 (420)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 338 (420)
++.+.+..++..++++++.|++.|+...+ ++.....+.+..++.........+ ........+++|+..+...
T Consensus 335 aa~l~Siigi~~i~gRi~~G~laD~~~~~-------~~~~~~~~ll~~gl~~~~~p~~~~-~~~l~~~~~~fG~~~g~~~ 406 (509)
T KOG2504|consen 335 AAFLLSIIGVSDIIGRIILGLLADKPGIR-------ALVLFLLTLLIAGLARLFLPFATT-YVGLIVFSILFGFCVGSFS 406 (509)
T ss_pred hHHHHHHHHHhhhhhhhhhhhhcCccccc-------hHHHHHHHHHHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998754 455555555555555544443332 3455556678888888777
Q ss_pred hhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhc
Q 014698 339 LSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAF 408 (420)
Q Consensus 339 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (420)
........+.++.++-..+.|+...+..++..+||++.|.+.|..++|...|+..+.+.++++...+...
T Consensus 407 ~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 407 SLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 6666677788899999999999999999999999999999999999999999999988877776555444
No 71
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.96 E-value=5.5e-26 Score=208.02 Aligned_cols=329 Identities=14% Similarity=0.058 Sum_probs=224.6
Q ss_pred hhhhccccccchhhhhH---HhHHhhhhcchhhhcchh----HHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhcc
Q 014698 30 KWVGLRIGRRGRIYLKD---TNLLELLRLPLLFVTWIR----KVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGE 102 (420)
Q Consensus 30 ~~l~~~~g~~~~l~~~~---~~~~~l~~~p~~~~~~~r----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 102 (420)
.+.+.+....+.+.+.+ ..+++++.+|+.||++|| |.+.+...+.. ......+++++.+++.|++.|++.
T Consensus 32 ~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~i~~~l~g~~~ 108 (382)
T PRK11128 32 KGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLFA---VAFWFGAHSFWLLFVAIGLFNLFF 108 (382)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHHH---HHHHHhcccHHHHHHHHHHHHHHH
Confidence 33444444444444333 344577778889999973 33333322222 222233688999999999999998
Q ss_pred ccchhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccCC
Q 014698 103 GVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNG 182 (420)
Q Consensus 103 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (420)
+...|...+++.|+ +++|+++.+......++|.++||++++++.+++|||..|++.++..++..+...+.||++++++
T Consensus 109 ~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (382)
T PRK11128 109 SPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASMLLGQLLRPTIMPQGE 186 (382)
T ss_pred cccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHccCCCCCccc
Confidence 88999888888887 4678899999999999999999999999999999999999877655444433333443322111
Q ss_pred CCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHH
Q 014698 183 ATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWV 262 (420)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 262 (420)
+++ + +++...++++++|+|+++...+..++..........+.|.|++| .|.++.+.|.+
T Consensus 187 ~~~-~-------------------~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~ 245 (382)
T PRK11128 187 SRQ-Q-------------------ESAGWPAWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQA-AGYSASTIGYL 245 (382)
T ss_pred ccc-c-------------------cccccchHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHHHH-CCCCHhHHHHH
Confidence 100 0 00012346789999999988887787777777778888999976 69999999999
Q ss_pred HHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhh
Q 014698 263 SILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGL 342 (420)
Q Consensus 263 ~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 342 (420)
.+...+..++...+.+++.||++++ ..+..+.....+........ ++.+...+..++.|++.+...+...
T Consensus 246 ~~~~~~~~~~~~~~~g~l~~r~~~~---------~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~g~~~~~~~~~~~ 315 (382)
T PRK11128 246 WSLGVVAEVLIFAFSNRLFRRWSAR---------DLLLLSAICGVVRWGLMGST-TALPWLIVIQILHCGTFTVCHLAAM 315 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCHH---------HHHHHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988888889999999999999853 22334444444444333332 3344445556677777775555554
Q ss_pred hhhhhccCccchHHHHHHHHHh-hhhhHHHHHHHHHHHhccCCceeeeehhhhHHH
Q 014698 343 YCTHQDISPEYASILLGITNTV-GAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFF 397 (420)
Q Consensus 343 ~~~~~~~~~~~~g~~~g~~~~~-~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~ 397 (420)
....+ .+++++++..+..+.. ..+|..++|.+.|.+.|..+ . ..++..+++.
T Consensus 316 ~~~~~-~~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g-~-~~~~~~~~~~ 368 (382)
T PRK11128 316 RYIAA-RPGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLG-A-GVFWVMALVA 368 (382)
T ss_pred HHHHH-CCHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-H-HHHHHHHHHH
Confidence 44444 4677788999988744 56777999999999999974 3 2455544443
No 72
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.96 E-value=4.2e-29 Score=217.63 Aligned_cols=340 Identities=15% Similarity=0.133 Sum_probs=243.4
Q ss_pred ccccchhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHh
Q 014698 36 IGRRGRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIAR 115 (420)
Q Consensus 36 ~g~~~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~ 115 (420)
.|-.+..+...+.+.+.+.+.++||++||+++..|..+|.++.+++++ ++.+|+++++|.+.|+|.+...|.++++++|
T Consensus 70 ~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~f-s~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD 148 (493)
T KOG1330|consen 70 LGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGF-SNHFWQVLLCRGFVGIGEASYSPIAPSLIAD 148 (493)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHH-HHHHHHHHHHHHHhccchhhhcccchhHhhh
Confidence 344455555566666777777899999999999999999999999997 8999999999999999999999999999999
Q ss_pred cCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccc-hhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhh
Q 014698 116 SIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG-WESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINM 194 (420)
Q Consensus 116 ~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g-wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (420)
.+|.++|++.+++++.+.++|..+|.+.+..+.+..+ |||.|+..+++++++.++.+++.++|++.++++.+.+...
T Consensus 149 ~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~~~~~~~-- 226 (493)
T KOG1330|consen 149 SFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERGARDEVDGENKM-- 226 (493)
T ss_pred cCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCcccccccccccCCcC--
Confidence 9999999999999999999999999999999888766 9999999999999876655555554443322222211100
Q ss_pred hhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhh---hCCCcchhhHHHHhhHHHHH
Q 014698 195 KKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEE---LSLNLTEAAWVSILPPLASV 271 (420)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~ 271 (420)
.+ .......+.+.+.|++.+....+......+....+..|.|.+.... .|.+..+..++..+...++.
T Consensus 227 ~~---------~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~ 297 (493)
T KOG1330|consen 227 VK---------PFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGS 297 (493)
T ss_pred CC---------CccchHHHHHHHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhch
Confidence 00 0111122345566667777777777777777777777777776553 35566666667788888999
Q ss_pred HHHHhhhhhhhhhhhcCcchHHHH--HHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhh-hhhhc
Q 014698 272 LVTSIAAQFADNLIATGVETTMVR--KICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLY-CTHQD 348 (420)
Q Consensus 272 ~~~~~~g~l~dr~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~ 348 (420)
+|.+++|.++||+.+...+....+ ......+....+..+.+.........+..+.++++|.......+..+. ...+.
T Consensus 298 lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~~g~~~~~~~~a~n~~i~l~v 377 (493)
T KOG1330|consen 298 LGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLILFLVGETISWFNWATNNPIFLEV 377 (493)
T ss_pred hhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcccccccceeeEe
Confidence 999999999999776432211112 222233333344444444444444555555666667666655555544 34456
Q ss_pred cCccchHHHHHHHHHhhhh-hHHHHHHHHHHHhccCCcee
Q 014698 349 ISPEYASILLGITNTVGAV-PGIVGVALTGYLLDSTHSWS 387 (420)
Q Consensus 349 ~~~~~~g~~~g~~~~~~~~-g~~~~~~~~g~l~~~~~~~~ 387 (420)
+||++|.++.++...+..+ |.+-+|++.|.+.|+.-+++
T Consensus 378 V~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l~g~~ 417 (493)
T KOG1330|consen 378 VPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDKLRGYK 417 (493)
T ss_pred cCcccccHHHHHHHHHHHHhccCCCcceehhHHHHhhCCC
Confidence 8999999999999877774 55666669999998764544
No 73
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.96 E-value=1.3e-26 Score=211.47 Aligned_cols=321 Identities=17% Similarity=0.135 Sum_probs=214.1
Q ss_pred hhhhhccccccch---hhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhc-hHHHHHHHHHHHHhcccc
Q 014698 29 KKWVGLRIGRRGR---IYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAG-FMPGLVLSRVLVGIGEGV 104 (420)
Q Consensus 29 ~~~l~~~~g~~~~---l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~r~l~G~~~~~ 104 (420)
.++++.+..+.+. .......++.++.+++.||++|||++..+.++..++.+++++ ++ +++.+++.|+++|++.+
T Consensus 29 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~g~~~~- 106 (366)
T TIGR00886 29 KDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGL-AVQSYSVLLLLRLFIGIAGG- 106 (366)
T ss_pred HHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHHHhch-
Confidence 3444444433333 334444566888888899999999999999999999998886 77 99999999999999855
Q ss_pred chhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhh----------ccchhHHH-HHHHHHHHHH-HHHhh
Q 014698 105 SPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE----------NLGWESVF-YIFGLLGIAW-FSGFK 172 (420)
Q Consensus 105 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~----------~~gwr~~f-~~~~~~~~~~-~~~~~ 172 (420)
..+...++++|++|+++|++++++.....++|..+++.+++.+.+ ..+||+.| ...++...+. .+...
T Consensus 107 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~ 186 (366)
T TIGR00886 107 SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILLLPALLIFF 186 (366)
T ss_pred hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHHHHHHHHHH
Confidence 456678999999999999999999998888888888888776654 24899999 4445554443 34444
Q ss_pred hcccCcccCCCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhh
Q 014698 173 ILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEEL 252 (420)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (420)
..+|++++++++++.+.+. ... + .++....+.++.+++|+++...+..++.....+....+.|.|+++.+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~----~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (366)
T TIGR00886 187 VGADTPPGKPATGKLSFKG----ARW-----S-VGTGALGDQLKVFRDRHTWILALLYSVTFGSFLGVSSIFAMFFKDQF 256 (366)
T ss_pred hcccCCcccccchhccccc----ccc-----c-ccchhHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4555543221111100000 000 0 00001113457788898888887777777777788889999999989
Q ss_pred CCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCC-CcHHHHHHHHHHH
Q 014698 253 SLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLG-LPHWEIVGILTAG 331 (420)
Q Consensus 253 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g 331 (420)
|.++.+++.+.....+..++++++.|++.||+++| +......................+ +............
T Consensus 257 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (366)
T TIGR00886 257 GLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGA-------RKLLMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVALF 329 (366)
T ss_pred CCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccc-------hhHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHH
Confidence 99999999988999999999999999999999975 333322222222222222222211 2222223333344
Q ss_pred HHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhH
Q 014698 332 LALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPG 369 (420)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~ 369 (420)
...+.......... .+..|+++|++.|+.+...++|+
T Consensus 330 ~~~g~~~~~~~~~~-~~~~~~~~g~~~g~~~~~~~~g~ 366 (366)
T TIGR00886 330 FFSGAGNGSTFALV-PHIFRRATGAVSGLVGAIGNLGG 366 (366)
T ss_pred HHhccccchhhhcc-hhhchhhcccHHHHHHHhccCCC
Confidence 44443333333333 34446899999999999888763
No 74
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.95 E-value=5.5e-26 Score=211.58 Aligned_cols=334 Identities=16% Similarity=0.105 Sum_probs=247.5
Q ss_pred hhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhh----chHHHHHHHHHHHHhccccchhhhHHHHHhcCC
Q 014698 43 YLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLA----GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIP 118 (420)
Q Consensus 43 ~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~ 118 (420)
......+.++++|.+.||++|||+++.+.++..+.....+.+. .+.+.+++.-++.|++.+...|..++++.|.+|
T Consensus 54 ~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~ 133 (524)
T PF05977_consen 54 STLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVP 133 (524)
T ss_pred HHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3445556688899999999999999999988776655544322 467889999999999999999999999999999
Q ss_pred ccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhhhhhh
Q 014698 119 LEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSL 198 (420)
Q Consensus 119 ~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (420)
+++..+++++.+...++..++||.++|.+...+|-.+.|.+.++..++........++++++++.. .+. .
T Consensus 134 ~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~~~~~~~~~---~e~-------~ 203 (524)
T PF05977_consen 134 KEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKPPPPPSSLP---RER-------F 203 (524)
T ss_pred HhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccc---hhh-------h
Confidence 999999999999999999999999999999988999999998876666544444444332211111 000 0
Q ss_pred hhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhh
Q 014698 199 SASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAA 278 (420)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g 278 (420)
.+.. +..++.+.++|.+....+..++.+.........+|.+.++.+|.++...|++.+..+++.++|.++.+
T Consensus 204 ~~~l--------~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~ 275 (524)
T PF05977_consen 204 FSAL--------REGLRYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLP 275 (524)
T ss_pred hhhH--------HHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000 11134455677776666666666666666677899999999999999999999999999999999999
Q ss_pred hhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHH
Q 014698 279 QFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILL 358 (420)
Q Consensus 279 ~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~ 358 (420)
++.+|++++ ..+..+.+..+.......... +.+...+.+++.|.+.........+..++..|++.||+++
T Consensus 276 ~l~~~~~~~---------~lv~~~~~~~a~~~~~lal~~-~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~ 345 (524)
T PF05977_consen 276 RLRRRLSSR---------RLVLLASLLFALALLLLALSP-SFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVF 345 (524)
T ss_pred HhhcccCcc---------hhhHHHHHHHHHHHHHHhcch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHH
Confidence 998887753 222333333344444333332 2444455567778887776667777778889999999999
Q ss_pred HHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHh
Q 014698 359 GITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVW 405 (420)
Q Consensus 359 g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (420)
+++++....+..+|..+.|.+.|.. +...++.+.++..+++.++..
T Consensus 346 si~~~~~~g~~~lGsll~G~la~~~-g~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 346 SIYQMVFFGGMPLGSLLWGFLADHF-GVRTALLIAGAALLLSALIAL 391 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999987 566667666655555444443
No 75
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.95 E-value=8e-26 Score=207.62 Aligned_cols=333 Identities=13% Similarity=0.094 Sum_probs=234.4
Q ss_pred hhhhhccccccchhhh---hHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHH--hhchHHHHHHHHHHHHhccc
Q 014698 29 KKWVGLRIGRRGRIYL---KDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPL--LAGFMPGLVLSRVLVGIGEG 103 (420)
Q Consensus 29 ~~~l~~~~g~~~~l~~---~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~r~l~G~~~~ 103 (420)
.++++.+..+.+.+.. ....++++..+++.||+++||++..+..+++++..+... ..++++.+++.|++.|+|.+
T Consensus 30 ~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g 109 (410)
T TIGR00885 30 QQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLG 109 (410)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHH
Confidence 4555555544444443 344455777778899999999999999999999887543 14679999999999999999
Q ss_pred cchhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhh--------------------------ccchhHHH
Q 014698 104 VSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE--------------------------NLGWESVF 157 (420)
Q Consensus 104 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~--------------------------~~gwr~~f 157 (420)
...+...+++.+..|+++|++.+++.+...++|..++|.+++.+.. ..+||++|
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~f 189 (410)
T TIGR00885 110 FLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPY 189 (410)
T ss_pred HHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999987742 23699999
Q ss_pred HHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHH
Q 014698 158 YIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGH 237 (420)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (420)
++.+++.++..+...+.++++. ++++ + ++ .....+.++++|+|+++...+..+++....
T Consensus 190 l~~a~~~~~~~~~~~~~~~p~~-~~~~--~-~~-----------------~~~~~~~~~~~~~~~~~~~~l~~f~yvg~e 248 (410)
T TIGR00885 190 MIIGAVVLAVALLIMLTKMPAL-NHSD--A-KQ-----------------ISFSASLSRLARIRHYREGVIAQFFYVGVQ 248 (410)
T ss_pred HHHHHHHHHHHHHHHHhcCCCC-Cccc--c-cc-----------------ccchhhHHHHHhChhHHHHHHHHHHHHHHH
Confidence 9988877665444333322211 1100 0 00 000012346788999998888888888888
Q ss_pred HHHhhhhhhHhhhhh-CCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhc
Q 014698 238 YTCLSWLPTYFSEEL-SLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSID 316 (420)
Q Consensus 238 ~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (420)
....++++.|.++.. +.+....+...+.......+|+++++++.||+++| +. ...+.....+...+....
T Consensus 249 ~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~--------~~-l~i~~~~~~~~~ll~~~~ 319 (410)
T TIGR00885 249 IMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAH--------KV-LMAYAIIGMALCLGSIFA 319 (410)
T ss_pred HHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH--------HH-HHHHHHHHHHHHHHHHHc
Confidence 788889999997642 33444445555666677889999999999999863 33 333333333333333333
Q ss_pred CCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccC-----Cceeeeeh
Q 014698 317 LGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDST-----HSWSMSLF 391 (420)
Q Consensus 317 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~-----~~~~~~~~ 391 (420)
.+ ......+.+.+++.+...+.......+..+++.+..+.++.... +|+++.|.+.|.+.|.. |+++.+|+
T Consensus 320 ~~--~~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~~--~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~ 395 (410)
T TIGR00885 320 GG--HVGLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMAI--IGGGIVPPLQGFIIDMKEIAAAPAVNTSFI 395 (410)
T ss_pred CC--hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHH--hccchHHHHHHHHHHHhcccccCccchHHH
Confidence 22 23355566778888878877777777777766654455554443 99999999999999953 45776776
Q ss_pred hhhH
Q 014698 392 APSI 395 (420)
Q Consensus 392 ~~~~ 395 (420)
+...
T Consensus 396 ~~~~ 399 (410)
T TIGR00885 396 LPLL 399 (410)
T ss_pred HHHH
Confidence 6433
No 76
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.95 E-value=1.9e-25 Score=206.00 Aligned_cols=349 Identities=10% Similarity=0.044 Sum_probs=231.3
Q ss_pred hhhhccccccchh---hhhHHhHHhhhhcchhhhcc-hhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccc
Q 014698 30 KWVGLRIGRRGRI---YLKDTNLLELLRLPLLFVTW-IRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVS 105 (420)
Q Consensus 30 ~~l~~~~g~~~~l---~~~~~~~~~l~~~p~~~~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 105 (420)
++.+.+..+.+.+ ......+++...+.+.||.+ +|+++..+.++.++.+....+ .++++.+.+.|++.|++.+..
T Consensus 31 ~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~ 109 (418)
T TIGR00889 31 KTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQ-VTTPAGMFPVLLANSLAYMPT 109 (418)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHccH
Confidence 3344444444433 34444556777777799986 577888888888888877765 788999999999999987777
Q ss_pred hhhhHHHHH--------hcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccC
Q 014698 106 PSAATDLIA--------RSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEG 177 (420)
Q Consensus 106 ~~~~~~~i~--------~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~ 177 (420)
.+...+... |......|.|..| .+|.++||.+++.+....+|+ +|++.++..++..+..+.+||+
T Consensus 110 ~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~~~-~f~~~~~~~~~~~~~~~~~~e~ 182 (418)
T TIGR00889 110 IALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIELSNI-QLYITAGSSALLGVFALTLPDI 182 (418)
T ss_pred HHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHHHHHhcCCCC
Confidence 776655532 2222234555555 478899999998774443454 4556666555544455667776
Q ss_pred cccCCCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCc-
Q 014698 178 ETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNL- 256 (420)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~- 256 (420)
++.+++++.+ . ++ ....+.++++|+|+++...+..++..........+.|.|+++. |.++
T Consensus 183 ~~~~~~~~~~-~-------------~~----~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~ 243 (418)
T TIGR00889 183 PVAKSTAKMS-I-------------KV----MLGLDAFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHEF-GRNPE 243 (418)
T ss_pred CCCccccccC-H-------------HH----HhhhhHHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHHh-ccccc
Confidence 4322111000 0 00 0011234677888888877777776666666667888888764 5543
Q ss_pred -------chhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCc---HHHHHH
Q 014698 257 -------TEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLP---HWEIVG 326 (420)
Q Consensus 257 -------~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 326 (420)
...+...+...+..+++.+..+++.||+|+| ..+..+.+...+...+........ ....+.
T Consensus 244 ~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r---------~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~ 314 (418)
T TIGR00889 244 FADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIK---------KVMLLSLVAWALRFGFFAYGDPEYFGYALLFLS 314 (418)
T ss_pred ccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcH---------HHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHH
Confidence 5568888889999999999999999999853 333344444444333333322111 223334
Q ss_pred HHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHH-HhhhhhHHHHHHHHHHHhccCC-----ceeeeehhhhHHHHHH
Q 014698 327 ILTAGLALSSFALSGLYCTHQDISPEYASILLGITN-TVGAVPGIVGVALTGYLLDSTH-----SWSMSLFAPSIFFYLT 400 (420)
Q Consensus 327 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~-~~~~~g~~~~~~~~g~l~~~~~-----~~~~~~~~~~~~~~~~ 400 (420)
.++.|.+.+...+.....+.+..|+++|+++.|+.+ ....+|..++|.+.|.+.|+.+ +|+..|.+.+++.+++
T Consensus 315 ~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~ 394 (418)
T TIGR00889 315 MIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAIL 394 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHH
Confidence 566677766555565666677889999999999997 5678999999999999999864 4777888887777777
Q ss_pred HHHHhhhccCCCCC
Q 014698 401 GTIVWLAFASSKPQ 414 (420)
Q Consensus 401 ~~~~~~~~~~~~~~ 414 (420)
+++.+++.++++++
T Consensus 395 ~~l~~~~~~~~~~~ 408 (418)
T TIGR00889 395 AVLFMIFFKYSHNA 408 (418)
T ss_pred HHHHHHHhCCcccC
Confidence 77777777766554
No 77
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.95 E-value=1.8e-25 Score=189.25 Aligned_cols=340 Identities=21% Similarity=0.214 Sum_probs=259.1
Q ss_pred hhhhhccccccchhhh---hHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccc
Q 014698 29 KKWVGLRIGRRGRIYL---KDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVS 105 (420)
Q Consensus 29 ~~~l~~~~g~~~~l~~---~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 105 (420)
.++++.+.+..+.+.. ..+...+.+..++..|++.+|.+..++++.+++..+-.. . +.+.++.+-.+.|.|.+..
T Consensus 39 r~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~-~-~~~~L~~gt~l~G~gIav~ 116 (395)
T COG2807 39 RQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSL-G-GLPLLFLGTLLAGAGIAVI 116 (395)
T ss_pred HHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhc-c-cHHHHHHHHHHHHhhHHHH
Confidence 4444444433333333 333344777777788999999999999999999998764 3 6788999999999999999
Q ss_pred hhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhcc-chhHHHHHHHHHHHHHHHHhhhcccCcccCCCC
Q 014698 106 PSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL-GWESVFYIFGLLGIAWFSGFKILQEGETSNGAT 184 (420)
Q Consensus 106 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (420)
.+..+..+.+.+| |+-+..+|+|....++|..+++.+...+.++. |||......+.++++.++.++--. .+++..+
T Consensus 117 nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~WlPq~--~r~~~~~ 193 (395)
T COG2807 117 NVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWLPQA--LREQAAS 193 (395)
T ss_pred HHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHhhhc--ccccccc
Confidence 9999999999998 77899999999999999999999999998877 799999999999988776655432 1111110
Q ss_pred cCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHH
Q 014698 185 LAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSI 264 (420)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 264 (420)
. +.+..+-..++|||..|...+.+.++++.+|....|+|.++.|+ |+|+.++|.+.+
T Consensus 194 ~----------------------~~~~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~-G~sa~~aG~lls 250 (395)
T COG2807 194 I----------------------ATKLVSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILIDR-GLSAAEAGSLLS 250 (395)
T ss_pred c----------------------ccccccccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHHc-CCCHHHhhhHHH
Confidence 0 00111124689999999999999999999999999999999996 999999999999
Q ss_pred hhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhh
Q 014698 265 LPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYC 344 (420)
Q Consensus 265 ~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 344 (420)
...+..++.++....+.+|..++ |...........+..+-+. +.+.+.++.. .++.|++.+...+.....
T Consensus 251 l~~l~~~~~~ll~P~la~R~~n~-------r~~~~~~~~~~l~G~~G~~-~~P~~~~~lw--~~llG~G~G~~F~laL~l 320 (395)
T COG2807 251 LMQLAQLPTALLIPLLARRSKNQ-------RPLVVLALLLMLVGLVGLL-LAPGQLPILW--ALLLGLGQGGAFPLALTL 320 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHhccc-------chHHHHHHHHHHHHHHHHH-HhhhhHHHHH--HHHHhCccchHHHHHHHH
Confidence 99999999999999999996654 3333333332222222222 2233233333 467788888777777777
Q ss_pred hhhcc-CccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhh
Q 014698 345 THQDI-SPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWL 406 (420)
Q Consensus 345 ~~~~~-~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (420)
+.... .+++.++-.|+.+.++++-.+.||.+.|++.|..|+|+..+...+...+...+.-+.
T Consensus 321 i~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~ 383 (395)
T COG2807 321 ILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFGLR 383 (395)
T ss_pred HHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHHhh
Confidence 66654 568889999999999999999999999999999999998887766655444444333
No 78
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.95 E-value=2.5e-25 Score=231.83 Aligned_cols=317 Identities=16% Similarity=0.077 Sum_probs=227.4
Q ss_pred hhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHH--hhchHHHHHHHHHHHHhccccchhhhHHHHHhcCC
Q 014698 41 RIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPL--LAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIP 118 (420)
Q Consensus 41 ~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~ 118 (420)
.++.....+++++.|++.||++|||+++.+.++..+..++..+ ..++++.+++.|+++|++.+...+...+++.|++|
T Consensus 54 ~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~ 133 (1146)
T PRK08633 54 ALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVG 133 (1146)
T ss_pred HHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcC
Confidence 3444455667888899999999999999888766555544332 25789999999999999999999999999999999
Q ss_pred ccccchhhHHHHhhhhhHHHHHHhhHHHhhhc--------c-chhHHHHHHHHHH-HHHHHHhhhcccCcccCCCCcCcc
Q 014698 119 LEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN--------L-GWESVFYIFGLLG-IAWFSGFKILQEGETSNGATLAPR 188 (420)
Q Consensus 119 ~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~--------~-gwr~~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 188 (420)
+++|++++++...+.++|.++|+.+++++.+. + +|++.+.+..+.. ++.++..+.+|+.++...... +.
T Consensus 134 ~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 212 (1146)
T PRK08633 134 KENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVPAAAPEVF-DK 212 (1146)
T ss_pred cccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcCcCCCCCCcccc-cc
Confidence 99999999999999999999999999999876 2 3444444444333 333444555666554322211 00
Q ss_pred chhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcc-hhhHHHHhhH
Q 014698 189 SNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLT-EAAWVSILPP 267 (420)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~ 267 (420)
+.. .. .+ .....++.++++|.++...+..++..........++|.|+++.+|.+.. +.+++.+...
T Consensus 213 ~~~----~~----~~-----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ 279 (1146)
T PRK08633 213 KKY----LF----PK-----LLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASA 279 (1146)
T ss_pred ccc----cc----HH-----HHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 000 00 00 0011245678888888887777777777777788999999998999998 8999999999
Q ss_pred HHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhh
Q 014698 268 LASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQ 347 (420)
Q Consensus 268 ~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 347 (420)
++.+++.++.+++.||+++++ . ...+.+..+++........ +.....+..++.|++.+...........+
T Consensus 280 ig~~~g~~~~g~l~~r~~~~~--------~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 349 (1146)
T PRK08633 280 IGIGIGSLLAGRLSGRHIELG--------L-VPLGALGLALSLFLLPTAP-SLASVLVLFFLFGFSAGLFIVPLNALIQF 349 (1146)
T ss_pred HHHHHHHHHHHHHhCCceEcc--------c-hhHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHhhHHHHHHHhh
Confidence 999999999999999988642 1 2222222222222222222 23444455677777777666666667777
Q ss_pred ccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhc
Q 014698 348 DISPEYASILLGITNTVGAVPGIVGVALTGYLLD 381 (420)
Q Consensus 348 ~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 381 (420)
..|++.||+++|+.+++..++..+++.+.+.+..
T Consensus 350 ~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~ 383 (1146)
T PRK08633 350 RAPEKELGKVLAANNFLQNVGMLLFLALTTLFSG 383 (1146)
T ss_pred cCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999999999888877776654
No 79
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.94 E-value=1.9e-26 Score=196.74 Aligned_cols=343 Identities=13% Similarity=0.127 Sum_probs=253.8
Q ss_pred hccccccchhhhhHHhH---HhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhh
Q 014698 33 GLRIGRRGRIYLKDTNL---LELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAA 109 (420)
Q Consensus 33 ~~~~g~~~~l~~~~~~~---~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 109 (420)
.+...+.+.++...... ...+.|++.||.++|-.+++|+.+....+++.++ .++++.++++|.+||+|.+......
T Consensus 102 ~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFaf-g~sy~~l~vAR~LQgvgsA~~~tsg 180 (464)
T KOG3764|consen 102 DRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAF-GNSYPMLFVARSLQGVGSAFADTSG 180 (464)
T ss_pred cccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHH-cchhHHHHHHHHHhhhhHHHHHhhh
Confidence 33444555554443333 2445556689999999999999999999999997 9999999999999999999999999
Q ss_pred HHHHHhcCCcc-ccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCcc
Q 014698 110 TDLIARSIPLE-ERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPR 188 (420)
Q Consensus 110 ~~~i~~~~~~~-~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (420)
.++++|.+|++ +|++++|+...+.++|..+||++||.+.+..|.+.+|.+.++++++...+.+++.|+.+.++..
T Consensus 181 lamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~~~---- 256 (464)
T KOG3764|consen 181 LAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDPDS---- 256 (464)
T ss_pred HHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCccc----
Confidence 99999999875 5899999999999999999999999999999999999999999999776666666554332211
Q ss_pred chhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHH
Q 014698 189 SNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPL 268 (420)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 268 (420)
..+..++++++++|..+.........+.........++.+..|.+..+..+.|..+....+
T Consensus 257 -------------------~~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~ 317 (464)
T KOG3764|consen 257 -------------------TEQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASL 317 (464)
T ss_pred -------------------cccCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeeccccc
Confidence 1122346789999999988877777777777777888998888888666699999999999
Q ss_pred HHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhh---hhhhhhhh
Q 014698 269 ASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSF---ALSGLYCT 345 (420)
Q Consensus 269 ~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~---~~~~~~~~ 345 (420)
...++..+.|.+.||+++. |......+......+........+... .++.....+++.+.. ..+.....
T Consensus 318 ~y~ig~~lfg~la~k~~~~-------~wl~~~~gl~~~G~~~~~iP~~~~~~~-L~vp~~~l~~~i~~~dasl~P~l~~l 389 (464)
T KOG3764|consen 318 SYAIGTNLFGKLADKYPHL-------RWLLSLGGLATVGVSSGPIPFATSIAQ-LWVPNFGLGFGIGLADASLIPTLGYL 389 (464)
T ss_pred chhccCchHHHHHHhcCch-------hHHHHHHHHHHHHHHhchhHhhhhHHH-HhhhhHHHHHHHHHHHHHHhhhhHHh
Confidence 9999999999999999865 545545555544444433333322111 222222222222222 22222222
Q ss_pred hhccCcc---chHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhc
Q 014698 346 HQDISPE---YASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAF 408 (420)
Q Consensus 346 ~~~~~~~---~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (420)
.+....+ ..|...++......+|.++||.++|.+.+.. ++.+.....++..++-+-++..++
T Consensus 390 vd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~i-GF~wl~~iig~~n~iyapvl~ll~ 454 (464)
T KOG3764|consen 390 VDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAI-GFEWLMTIIGILNLIYAPVLLLLR 454 (464)
T ss_pred cchhhccccceeeeHHHHHHHHHHHhhhccccccchheeeh-hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222222 5789999999999999999999999999997 677766666666666555544443
No 80
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.94 E-value=1.3e-24 Score=197.48 Aligned_cols=287 Identities=13% Similarity=0.079 Sum_probs=204.8
Q ss_pred hhhhcchhhhc-----chhHH-HHHHHHHHHHHHHHHHHhh--chHHHHHHHHHHHHhccccchhhhHHHHHhcCCcccc
Q 014698 51 ELLRLPLLFVT-----WIRKV-LQTGVLIWSLATALLPLLA--GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEER 122 (420)
Q Consensus 51 ~l~~~p~~~~~-----~~r~~-~~~~~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 122 (420)
.++.+|+.||+ ||||. ++.+.+..++.....++.. .+.+.+....++.+.+.+...+...+++.|++|+|+|
T Consensus 38 ~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r 117 (356)
T TIGR00901 38 KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEEL 117 (356)
T ss_pred HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhh
Confidence 88899999998 67775 5667777777766665522 4566677788888888888899999999999999999
Q ss_pred chhhHHHHhhhhhHHHHHHhhHHHhhhccc--------hhHHHHHHHHHHHHHHHHhhh-cccCcccCCCCcCccchhhh
Q 014698 123 SRAVSFVFGGLSFGSVAGLLLAPPIIENLG--------WESVFYIFGLLGIAWFSGFKI-LQEGETSNGATLAPRSNYIN 193 (420)
Q Consensus 123 ~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g--------wr~~f~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 193 (420)
+++.++...+.++|.++++.+++.+.+..| ||..|++.++..++..+..++ .||++++ ++++ ++.
T Consensus 118 ~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~~~~-~~~~--~~~--- 191 (356)
T TIGR00901 118 GYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTALLILPGLLVTLFLAKEPQED-ASVP--KPL--- 191 (356)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHHhccCCCcc-cccc--hhH---
Confidence 999999999999999999999999988888 999999998877765544443 3443221 1100 000
Q ss_pred hhhhhhhhhhhhcccccccchhhhhhcHH---HHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhH-HH
Q 014698 194 MKKSLSASLEEMGESLKDVPWKAIFRSKA---VWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPP-LA 269 (420)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~ 269 (420)
+++ .+.++++++++|. ++...+..++.....+....+.|.|+++ +|+++.+.+......+ +.
T Consensus 192 -~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~ 257 (356)
T TIGR00901 192 -TQA------------VLKPIREFFQRKNMIQALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLG 257 (356)
T ss_pred -HHH------------HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHH
Confidence 000 0112456666664 6766667777778888888999999988 7999999998887666 57
Q ss_pred HHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHH-hh--cC-------CCcHHHHHHHHHHHHHhhhhhh
Q 014698 270 SVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLS-SI--DL-------GLPHWEIVGILTAGLALSSFAL 339 (420)
Q Consensus 270 ~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~-------~~~~~~~~~~~~~g~~~~~~~~ 339 (420)
.+++.++++++.||+++| + ...... +...+..... .. .. ++........++.+++.+...+
T Consensus 258 ~~~g~~~~g~l~~r~g~~-------~-~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 328 (356)
T TIGR00901 258 AILGGLIGGIIMQPLNIL-------Y-ALLLFG-IVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTV 328 (356)
T ss_pred HHHHHHHHHHHHhhhhHH-------H-HHHHHH-HHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHH
Confidence 789999999999999964 2 222222 2222222221 11 11 1122333344556777777777
Q ss_pred hhhhhhhhccCccchHHHHHHHHHhhh
Q 014698 340 SGLYCTHQDISPEYASILLGITNTVGA 366 (420)
Q Consensus 340 ~~~~~~~~~~~~~~~g~~~g~~~~~~~ 366 (420)
.......+..|+++||+..|+.++..+
T Consensus 329 ~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 329 AFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 777888888999999999999887654
No 81
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.94 E-value=8.9e-25 Score=185.51 Aligned_cols=347 Identities=14% Similarity=0.045 Sum_probs=222.3
Q ss_pred cccchhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhc
Q 014698 37 GRRGRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARS 116 (420)
Q Consensus 37 g~~~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 116 (420)
|-.+..++....+.+...|-+.|++|||++++++++..++...+.+. ++|+..+.+.|++.|+.-+-. ....++++|.
T Consensus 71 GflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~-S~~F~afv~aR~l~Gi~kgnl-~v~rAiisdV 148 (451)
T KOG2615|consen 71 GFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWAL-SRNFAAFVLARFLGGIFKGNL-SVIRAIISDV 148 (451)
T ss_pred hhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhhhhccCch-HHHHHHHHhh
Confidence 33344444444445666666699999999999999999998888886 999977777799999996655 4568999999
Q ss_pred CCccccchhhHHHHhhhhhHHHHHHhhHHHhhh---ccchhHHHHH----HHHHHHH-HHHHhhhcccCcccCCCCcCcc
Q 014698 117 IPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE---NLGWESVFYI----FGLLGIA-WFSGFKILQEGETSNGATLAPR 188 (420)
Q Consensus 117 ~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~---~~gwr~~f~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 188 (420)
+++|+|++.++.....+++|.++||.+|+++.+ ..| +.+|.. ..++... .....+++||+-+.+++. ++
T Consensus 149 ~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g-~~p~alP~~~v~i~a~~~v~~~~~~lpETL~~rk~~--~~ 225 (451)
T KOG2615|consen 149 VSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISG-SYPFALPCLLVFILAAGDVTFFPWFLPETLPLRKRN--DE 225 (451)
T ss_pred cChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhc-cCchHHHHHHHHHHHHHHHHHHHHhCCccccchhhc--cc
Confidence 999999999999999999999999999999988 222 222322 2222222 345678889986654443 11
Q ss_pred chhhhhhhhhhhhhhhhcccccccchhhhhhcHH-------HHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhH
Q 014698 189 SNYINMKKSLSASLEEMGESLKDVPWKAIFRSKA-------VWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAW 261 (420)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 261 (420)
..+..+..+.+. +..+. ....-...+||++ .....+..+.+...+.....+.+.+-++.+|+++.+.|.
T Consensus 226 ~~~~~~~~~~~~---~~~~~-~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~ 301 (451)
T KOG2615|consen 226 HSTLQEAADDRL---ALLKF-ARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQGK 301 (451)
T ss_pred ccchhhhhhhhh---hhcch-hhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhhee
Confidence 110100011000 00000 0000011222221 223344555555555555555555656788999999999
Q ss_pred HHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhh
Q 014698 262 VSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSG 341 (420)
Q Consensus 262 ~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 341 (420)
+.+..++...+.+....+..||.+.. .+...........-.+++..... .+........+..+......+..
T Consensus 302 vl~~tGl~m~~~ql~~~~~l~~~~~~-------~~a~l~~~l~~~vP~~llls~~~-~~~~l~~~s~l~sf~~A~~vt~L 373 (451)
T KOG2615|consen 302 VLSTTGLLMLVIQLALVPILPRYKGN-------IKAVLLFSLLLIVPAFLLLSLAR-TPVVLYLGSTLKSFSTASVVTCL 373 (451)
T ss_pred eeehhhHHHHHHHHhccccccccccc-------hhhHHHHHHHHHHHHHHHHhccc-cchhhhHHHHHHHHHHHHhhHHH
Confidence 99888888888777766666765421 12222222222222223332222 23444555555556555455555
Q ss_pred hhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHH
Q 014698 342 LYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLT 400 (420)
Q Consensus 342 ~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~ 400 (420)
........|+++||+++|+..+...++.++||.+.|.+..+..+-+.++..-+...++.
T Consensus 374 t~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws~~~~~a~~~~~~L~~~~ 432 (451)
T KOG2615|consen 374 TSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWSQGAQPAYIAWGALLLIP 432 (451)
T ss_pred HHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEEecCCCceeeehHHHHHHH
Confidence 55555667889999999999999999999999999999987655665665544444433
No 82
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.94 E-value=8.3e-26 Score=216.82 Aligned_cols=252 Identities=17% Similarity=0.142 Sum_probs=191.4
Q ss_pred cccccchhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhc----------------------------
Q 014698 35 RIGRRGRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAG---------------------------- 86 (420)
Q Consensus 35 ~~g~~~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~---------------------------- 86 (420)
..|.....+.....++.++.+.++||++|||++.++.+++++++++.+. ++
T Consensus 69 ~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~al-phf~~~~y~~~~~~~~~~~~~~~~~~~c~~ 147 (633)
T TIGR00805 69 SSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSL-PHFLSGRYSYSTTVSSTGNLSSANSFLCME 147 (633)
T ss_pred cceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhC-hHHhcCCccccccccccccccccccccccC
Confidence 3444555555556666777778899999999999999999999998864 42
Q ss_pred -----------------------hHHHHHHHHHHHHhccccchhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhh
Q 014698 87 -----------------------FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLL 143 (420)
Q Consensus 87 -----------------------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l 143 (420)
.+..++++|+++|+|.+..++...+++.|++|+++|++++++...+..+|.++|+++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~ll 227 (633)
T TIGR00805 148 NLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLL 227 (633)
T ss_pred CCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHH
Confidence 245678999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhcc----------------------chhHHHHHHHHHHHHHHHHhhhcccCcccCCCCc-Cccchhhhhhhhhhh
Q 014698 144 APPIIENL----------------------GWESVFYIFGLLGIAWFSGFKILQEGETSNGATL-APRSNYINMKKSLSA 200 (420)
Q Consensus 144 ~~~l~~~~----------------------gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 200 (420)
++++.+.+ +||..|++.+++.++..+.++++|++.|+..++. .+.++....++...+
T Consensus 228 gg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p~~lp~~~~~~~~~~~~~~~~~~~~~~ 307 (633)
T TIGR00805 228 GSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFFPKALPKEGKRVNVDVHETEKLEKSEDK 307 (633)
T ss_pred HHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCcccccchhhhhhhcccccccc
Confidence 99988643 2778899988888876666777887655332111 010000000000000
Q ss_pred hhhh--hcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHH-HHHHHHHhh
Q 014698 201 SLEE--MGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPL-ASVLVTSIA 277 (420)
Q Consensus 201 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~ 277 (420)
...+ ...+.....++++++||.++...+..++.....+++..++|.|+++++|+++.+++++.....+ +.+++.+++
T Consensus 308 ~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~ 387 (633)
T TIGR00805 308 SRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIG 387 (633)
T ss_pred cchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhh
Confidence 0000 0000112346789999999999999999999999999999999999999999999999887776 567899999
Q ss_pred hhhhhhhhhc
Q 014698 278 AQFADNLIAT 287 (420)
Q Consensus 278 g~l~dr~~~~ 287 (420)
|+++||++.+
T Consensus 388 G~l~~r~~~~ 397 (633)
T TIGR00805 388 GFIMKKFKLN 397 (633)
T ss_pred hheeeeeccc
Confidence 9999999854
No 83
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.94 E-value=5.6e-25 Score=204.13 Aligned_cols=339 Identities=11% Similarity=0.012 Sum_probs=210.5
Q ss_pred hhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHh--hc-----hHHHHHHHHHHHHhccccchhhhHHHHHhc
Q 014698 44 LKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLL--AG-----FMPGLVLSRVLVGIGEGVSPSAATDLIARS 116 (420)
Q Consensus 44 ~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~--~~-----~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 116 (420)
.....+.+.+.+.+.||++|||++..+..+..++....... ++ ........++..|.+.....+....+..+.
T Consensus 56 ~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (420)
T PRK09528 56 SLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERV 135 (420)
T ss_pred HHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHH
Confidence 33444457777777999999999988766655443321110 11 111123334444444333333333333222
Q ss_pred CCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhhhh
Q 014698 117 IPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKK 196 (420)
Q Consensus 117 ~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (420)
++++++.++......++|..++|++++.+.+. +|+..|++.++..++..+..++.+++++++.+.+++ ++. +
T Consensus 136 --~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~ 207 (420)
T PRK09528 136 --SRRSGFEYGRARMWGSLGWALCAFIAGILFNI-NPQINFWLGSGSALILLVLLFFAKPDAPSTAKVANA-LGA----N 207 (420)
T ss_pred --HhhccccchhhHHhhhHHHHHHHHHHHHHHhc-CchHhHHHHHHHHHHHHHHHhcccccccchhhhccc-hhc----c
Confidence 35678888999999999999999999988764 899999998888777665555554443322111000 000 0
Q ss_pred hhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhh---CCCcchhhHHHHhhHHHHHHH
Q 014698 197 SLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEEL---SLNLTEAAWVSILPPLASVLV 273 (420)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~ 273 (420)
+++.+..+.++.+|||+++...+........+.....+.|.|+.+.+ +.+..+.+.+.+...+...++
T Consensus 208 ---------~~~~~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 278 (420)
T PRK09528 208 ---------ASAVSLKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALI 278 (420)
T ss_pred ---------cccccHHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHH
Confidence 00011122446778888776665555554555555556777776543 455567788888888899999
Q ss_pred HHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccc
Q 014698 274 TSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEY 353 (420)
Q Consensus 274 ~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 353 (420)
.++.|++.||+++| + . ...+.....+...+..... +.........+.+...+...........+..|++.
T Consensus 279 ~~~~g~l~dr~g~~-------~-~-~~~~~~l~~~~~~l~~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~ 348 (420)
T PRK09528 279 MFFAPFIINRIGAK-------N-A-LLLAGTIMAVRIIGSGFAT-GPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRL 348 (420)
T ss_pred HHHHHHHHHHhCcc-------h-h-hHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc
Confidence 99999999999975 2 2 2222333333333333322 23434444455566555444555555667788888
Q ss_pred hHHHHHH-HHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhccC
Q 014698 354 ASILLGI-TNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFAS 410 (420)
Q Consensus 354 ~g~~~g~-~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (420)
+++..+. .++...+|.+++|.+.|.+.|.. +++..|...+++.++..++.+...++
T Consensus 349 ~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~-G~~~~f~~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 349 SATIYLVGFQFAKQLGAVFLSTLAGNLYDSI-GFQGTYLILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred eeeeeeehHHHHHHHHHHHHHHHHHHHHHhh-CchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 8888765 57778899999999999999986 68888888777666655555544443
No 84
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.94 E-value=2.4e-23 Score=194.69 Aligned_cols=354 Identities=13% Similarity=0.108 Sum_probs=224.6
Q ss_pred Hhhhhcchhhh-cchhHHHHHHHHHHHHHHHHHHHhhchHHH-HHHHHHHHHhccccchhhhHHHHHhcCCcc--ccchh
Q 014698 50 LELLRLPLLFV-TWIRKVLQTGVLIWSLATALLPLLAGFMPG-LVLSRVLVGIGEGVSPSAATDLIARSIPLE--ERSRA 125 (420)
Q Consensus 50 ~~l~~~p~~~~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~--~r~~~ 125 (420)
..++++.+.|| .||||++..+.+++.++++.+++ +++... +.++|+++|+|.|...|...++++|.+|++ +|+++
T Consensus 66 ~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~-~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~ 144 (489)
T PRK10207 66 LISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGM-SLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGA 144 (489)
T ss_pred HHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHH-hccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcc
Confidence 35678888999 89999999999999999999876 655444 558999999999999999999999999877 45789
Q ss_pred hHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccC---C-CCcCccchhhh--------
Q 014698 126 VSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSN---G-ATLAPRSNYIN-------- 193 (420)
Q Consensus 126 ~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~-------- 193 (420)
+++++.+.++|..+||.+++++.+++|||+.|++.++..++..+.+...++..++. . +++.|......
T Consensus 145 ~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~ 224 (489)
T PRK10207 145 FTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVM 224 (489)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHHHHHHH
Confidence 99999999999999999999999999999999997553333333333333221111 1 11111111000
Q ss_pred -------hhhhhhhhhh--h---------hcccccccchhhhhhcHHHHHHHHH--HHHhHHHHHHHhhhhhhHhhhhhC
Q 014698 194 -------MKKSLSASLE--E---------MGESLKDVPWKAIFRSKAVWAMIYA--HFCGSWGHYTCLSWLPTYFSEELS 253 (420)
Q Consensus 194 -------~~~~~~~~~~--~---------~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g 253 (420)
.+........ . ..++.+ ..+++|+|.+....+. ..+....+....+.++.+.++..+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~~~~---~~~~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~ 301 (489)
T PRK10207 225 IFVCAWLMHNVEVANLVLIVLSIVVTIIFFREAFK---LDKTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVH 301 (489)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhc---CCHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhcc
Confidence 0000000000 0 000000 1145666665544322 344445555555778888875322
Q ss_pred CCc----chhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHH------Hhh-c-CC-Cc
Q 014698 254 LNL----TEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTL------SSI-D-LG-LP 320 (420)
Q Consensus 254 ~~~----~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~-~-~~-~~ 320 (420)
.+. .....+.+...+..++..++.+++.||+++|+.......+... ++++.++++.. ... . .. +.
T Consensus 302 ~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~--G~~l~~~~~~~~~~~~~~~~~~~~~~s~ 379 (489)
T PRK10207 302 HEILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTL--GMFLCSLGFLTAAAAGMWFADAQGLTSP 379 (489)
T ss_pred ccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHH--HHHHHHHHHHHHHHHHHhhcCCCCccCH
Confidence 211 1223444555566777888889999999987543333233332 22222222211 111 1 11 23
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhcc---------CCceeeeeh
Q 014698 321 HWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDS---------THSWSMSLF 391 (420)
Q Consensus 321 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~---------~~~~~~~~~ 391 (420)
++.....++.+++.....++....+.+..|++.+|.++|+.+...++|+.++..+....... .+.+...|.
T Consensus 380 ~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~ 459 (489)
T PRK10207 380 WFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFG 459 (489)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHH
Confidence 44555668889999988888888888999999999999999999999999998887655210 112445566
Q ss_pred hhhHHHHHHHHHHhhhcc
Q 014698 392 APSIFFYLTGTIVWLAFA 409 (420)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~ 409 (420)
..++..++++++.+...+
T Consensus 460 ~~~~~~~~~~v~~~~~~~ 477 (489)
T PRK10207 460 KIGLVTLGVAVVMALMVP 477 (489)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 666656555555555444
No 85
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.94 E-value=1.6e-23 Score=195.82 Aligned_cols=360 Identities=14% Similarity=0.068 Sum_probs=236.8
Q ss_pred HHhHHhhhhcchhhh-cchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCccc---
Q 014698 46 DTNLLELLRLPLLFV-TWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEE--- 121 (420)
Q Consensus 46 ~~~~~~l~~~p~~~~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~--- 121 (420)
...++.++++.+.|| .||||++..+..+.+++.++.++ +++++.+.+.|.+.|+|.|...|...++++|++|+++
T Consensus 60 ~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~-~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~ 138 (475)
T TIGR00924 60 LVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAM-SIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPR 138 (475)
T ss_pred HHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHh-cccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCccc
Confidence 344457778888999 79999999999999999988876 7888889999999999999999999999999998754
Q ss_pred cchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcC--ccchhhhhhhh--
Q 014698 122 RSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLA--PRSNYINMKKS-- 197 (420)
Q Consensus 122 r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-- 197 (420)
|++++++.+.+.++|.++||.+++++.+.+|||+.|.+.++..++..+.....++..++.++++. ++++.......
T Consensus 139 r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (475)
T TIGR00924 139 RDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLA 218 (475)
T ss_pred ccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHHHHH
Confidence 88899999999999999999999999998999999999886555544444443332211111110 00000000000
Q ss_pred ------------hh--hh-hh---------------hhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhH
Q 014698 198 ------------LS--AS-LE---------------EMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTY 247 (420)
Q Consensus 198 ------------~~--~~-~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (420)
+. +. .. +.....++....+-.|.+.+..+.+...+.+..+....+.++.+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~ 298 (475)
T TIGR00924 219 LLAALALVFFCAWLMHHVVIANILLMTVTLAVIIFFFRLAFKPRLDAVARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFF 298 (475)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 00 00 00 00000001111111222344445555556666666777778888
Q ss_pred hhhhhCCCcch----hhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhh--------
Q 014698 248 FSEELSLNLTE----AAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSI-------- 315 (420)
Q Consensus 248 ~~~~~g~~~~~----~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 315 (420)
.++..+.+... .+++.+...+..++.+++..++..|..+|+.......| +..+.++.++++.....
T Consensus 299 ~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k--~~~G~~l~~~~~~~~~~~~~~~~~~ 376 (475)
T TIGR00924 299 ADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLK--FTLGMLFCGASFLTFAASIWFADAG 376 (475)
T ss_pred HHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHH--HHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 77654443222 66788888888888887766655566554221111112 23334433333333221
Q ss_pred cCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhH
Q 014698 316 DLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSI 395 (420)
Q Consensus 316 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~ 395 (420)
...+.++.+...++.+++.....+.......+..|++.||+.+|+......+|..+++.+.....+.. ++...|...++
T Consensus 377 ~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~-~~~~~~~~~~~ 455 (475)
T TIGR00924 377 GLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQ-GVTGVFGKIGL 455 (475)
T ss_pred CccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-chhhHHHHHHH
Confidence 12345566777788899999888888888888899999999999999999999999999888776663 56656666666
Q ss_pred HHHHHHHHHhhhcc
Q 014698 396 FFYLTGTIVWLAFA 409 (420)
Q Consensus 396 ~~~~~~~~~~~~~~ 409 (420)
.+++.+++.+...+
T Consensus 456 ~~~~~~~~~~~~~~ 469 (475)
T TIGR00924 456 VTLLVGVVMALMVP 469 (475)
T ss_pred HHHHHHHHHHHHHH
Confidence 66655555554444
No 86
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.93 E-value=1.6e-23 Score=176.82 Aligned_cols=354 Identities=14% Similarity=0.085 Sum_probs=245.8
Q ss_pred HHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCccccchh
Q 014698 46 DTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRA 125 (420)
Q Consensus 46 ~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 125 (420)
...+++-.++...|+.|||+.+.+......+...+.++ ++|+..+++.|.+.|+|.|+ .|...++-.|..|..+|...
T Consensus 125 gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~-spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~ 202 (528)
T KOG0253|consen 125 GMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGA-SPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLL 202 (528)
T ss_pred hhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcC-CCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcc
Confidence 33455777777799999999999999999999988886 99999999999999999999 88888999999999999988
Q ss_pred hHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhhhh---------
Q 014698 126 VSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKK--------- 196 (420)
Q Consensus 126 ~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 196 (420)
+-.. ..+.+|.+....+.-....++||||.....+.+..+.....+++||+++..-.+.++.++....++
T Consensus 203 ~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~ql 281 (528)
T KOG0253|consen 203 TVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFAARFLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQL 281 (528)
T ss_pred hhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCCC
Confidence 7777 999999999999999999999999999999988888888899999998865444333322110000
Q ss_pred --------------hhhhhhhhhc---ccccccchhhhhh---cHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhh----
Q 014698 197 --------------SLSASLEEMG---ESLKDVPWKAIFR---SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEEL---- 252 (420)
Q Consensus 197 --------------~~~~~~~~~~---~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 252 (420)
.......+.+ .+.......+++. .+....+....+...+.+|+.........+...
T Consensus 282 plgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg~~~nLlsp~lrkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~ 361 (528)
T KOG0253|consen 282 PLGVLESSAIDRQEQEESDLDDSKSSAAKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPL 361 (528)
T ss_pred CcceeeeehhhhhhhhhhchhhhhhccccccccchHhhcChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCcccc
Confidence 0000000000 1111112233332 123334444555566666665554444444321
Q ss_pred ---------------CCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcC
Q 014698 253 ---------------SLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDL 317 (420)
Q Consensus 253 ---------------g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (420)
..+...--.=.....+....|.++.+++.||+|| |..+..++++..++.+......
T Consensus 362 ~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGR---------KkTMal~l~~f~iflfll~~c~ 432 (528)
T KOG0253|consen 362 YNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGR---------KKTMALSLILFGIFLFLLTTCK 432 (528)
T ss_pred chhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcc---------hhHHHHHHHHHHHHHHHHHHhc
Confidence 0111111112345567888999999999999995 4555666666666655555444
Q ss_pred CCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHH
Q 014698 318 GLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFF 397 (420)
Q Consensus 318 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~ 397 (420)
+.+. ..+..+..-++..+.....+....+.+|+..|+++.|..+.+..+|+++.|.+. ...+. +...+..+.+.++
T Consensus 433 ~rn~-~tvllf~arafisg~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA-~~~e~--s~sl~i~vy~~~~ 508 (528)
T KOG0253|consen 433 TRNA-YTVLLFTARAFISGAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA-MRAEL--STSLPIFVYGALF 508 (528)
T ss_pred Ccch-hHHHHHHHHHHHhchheEEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHH-HHhcc--ceeehHHHHHHHH
Confidence 4332 333344445555555666666677778999999999999999999999999988 33333 5666777888888
Q ss_pred HHHHHHHhhhccCCCCCC
Q 014698 398 YLTGTIVWLAFASSKPQN 415 (420)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~ 415 (420)
+++++...++..++|.+.
T Consensus 509 ilagIavcffPiEtkGR~ 526 (528)
T KOG0253|consen 509 ILAGIAVCFFPIETKGRS 526 (528)
T ss_pred HHHHHHheeeeeccCCCC
Confidence 888888888888888765
No 87
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.93 E-value=1.2e-23 Score=193.84 Aligned_cols=333 Identities=11% Similarity=0.022 Sum_probs=217.5
Q ss_pred hhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHh--h-----chHHHHHHHHHHHHhccccchhhhHHHHHhc
Q 014698 44 LKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLL--A-----GFMPGLVLSRVLVGIGEGVSPSAATDLIARS 116 (420)
Q Consensus 44 ~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~--~-----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 116 (420)
.....+.+...+.+.||++|||+++.+.....++....... . +....+++.|++.|++.+...+....+..|.
T Consensus 48 ~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 127 (396)
T TIGR00882 48 SLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKV 127 (396)
T ss_pred HHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHh
Confidence 33444456777777999999999988777665544322110 1 2233456778999999888888888888775
Q ss_pred CCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhhhh
Q 014698 117 IPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKK 196 (420)
Q Consensus 117 ~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (420)
. +++++..+......++|.++||.+++.+.+ .+||..|++.++..++..+..+..+++++++++++ +..+
T Consensus 128 ~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~------ 197 (396)
T TIGR00882 128 S--RNSNFEYGKARMFGCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLLMFAKPKAPSSATVA-NALG------ 197 (396)
T ss_pred h--hhcccccchhhhhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHHHHhCCCCchhhhhh-cccc------
Confidence 3 334567788888899999999999998765 49999999988887776544444444332211110 0000
Q ss_pred hhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhh---CCCcchhhHHHHhhHHHHHHH
Q 014698 197 SLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEEL---SLNLTEAAWVSILPPLASVLV 273 (420)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~ 273 (420)
+..++.+..+.++++|||+++...+..+.....+.....+.|.|+++.+ +.+....|...+...+...++
T Consensus 198 -------~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~ 270 (396)
T TIGR00882 198 -------ANASAFSLKLALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALI 270 (396)
T ss_pred -------cccCCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHH
Confidence 0001111223568889999887776666655556666667888887754 455566788888888888999
Q ss_pred HHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccc
Q 014698 274 TSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEY 353 (420)
Q Consensus 274 ~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 353 (420)
....+++.||+++| + . ...+....++........ ++.+......++.+.+.............+..+++.
T Consensus 271 ~~~~g~l~~r~g~~-------~-~-l~~~~~l~~l~~~~~~~~-~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~ 340 (396)
T TIGR00882 271 MFCAPLIINRIGAK-------N-A-LLIAGTIMSVRIIGSSFA-TTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRL 340 (396)
T ss_pred HHHHHHHHHHhccc-------h-h-HHHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcce
Confidence 99999999999975 2 2 223333333333332222 234444444455555544333333333445567777
Q ss_pred hHHHHHH-HHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHH
Q 014698 354 ASILLGI-TNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIV 404 (420)
Q Consensus 354 ~g~~~g~-~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (420)
++++.+. .+....+|+.++|.+.|++.|.. +++.+|.+.+++.++.+.+.
T Consensus 341 ~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~-G~~~~f~~~~~~~~i~~~~~ 391 (396)
T TIGR00882 341 SATIYLIGFQFAKQLAMIFLSTLAGNMYDSI-GFQGAYLVLGCIVLLFTLIS 391 (396)
T ss_pred EEEeehHHHHHHHHHHHHHHHHhHHHHHHhc-ccHHHHHHHHHHHHHHHHHH
Confidence 7777766 57888999999999999999986 78888888777666555443
No 88
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.93 E-value=4.8e-23 Score=196.35 Aligned_cols=358 Identities=13% Similarity=0.027 Sum_probs=239.4
Q ss_pred chhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCc
Q 014698 40 GRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPL 119 (420)
Q Consensus 40 ~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 119 (420)
..++..+..+|.++.+|+.|++|||++++.++++..++.+..++ ++|++.+++.|+++|++.++.......++.|++++
T Consensus 124 ~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~-a~~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~ 202 (521)
T KOG0255|consen 124 QSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAF-APNYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSP 202 (521)
T ss_pred HHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHH-hCcHHHHHHHHHHHHhhccchhHHhHhhheeecCc
Confidence 56777788889999999999999999999999999999999986 99999999999999999999999999999999999
Q ss_pred cccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhhhhh--
Q 014698 120 EERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKS-- 197 (420)
Q Consensus 120 ~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 197 (420)
++|+.+..+ ......+..++++.++++.+ +||+.+++..++.++..+.+++.||++++...+.+.++..+..++.
T Consensus 203 ~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~~~l~~Es~rwl~~~g~~~~a~~~l~~~a~ 279 (521)
T KOG0255|consen 203 KQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLLWFLPPESPRWLLSKGRIDEAIKILKKIAK 279 (521)
T ss_pred chhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHccCcChHHHHHcCchHHHHHHHHHHHh
Confidence 999999999 88888888888888888887 8999999999999887766666669888765444433221111110
Q ss_pred -------hh----hh----hhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHH
Q 014698 198 -------LS----AS----LEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWV 262 (420)
Q Consensus 198 -------~~----~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 262 (420)
.. .. .++.....++..+.++++.|++....+...+..+.......-++.... .+|.+.. ..
T Consensus 280 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~gl~~~~~-~lg~~~~---~~ 355 (521)
T KOG0255|consen 280 LNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGLSLNVS-GLGGNIY---LN 355 (521)
T ss_pred hcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhHHHHhhhhhhh-hcCchHH---HH
Confidence 00 00 001111123345778888876555554444444332222222222222 2344332 23
Q ss_pred HHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcH--HHHHHHHHHHHHhhhhhhh
Q 014698 263 SILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPH--WEIVGILTAGLALSSFALS 340 (420)
Q Consensus 263 ~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~~ 340 (420)
....+..........+...||.|| +...........++++.......... .......+...+.+.....
T Consensus 356 ~~~~~~~~~p~~~~~~~~~~~~gR---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (521)
T KOG0255|consen 356 FTLSGLVELPAYFRNGLLLPEFGR---------RPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNL 426 (521)
T ss_pred HHHHHHHHhhHHHHHHHHHHHhCc---------HHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHH
Confidence 334444666666777889999974 45555555554444444444333222 2222223333344434444
Q ss_pred hhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhccCCCCCCC
Q 014698 341 GLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSKPQNF 416 (420)
Q Consensus 341 ~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (420)
......+.+|+..|..+.+..+....++++++|.+.-..... .....+...+....+.+.+...+.++++.++.
T Consensus 427 ~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~lpet~~~~l 500 (521)
T KOG0255|consen 427 IFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQM--FPLLGLILFGWLALLLGLLSLLLLPETKGKPL 500 (521)
T ss_pred HHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--cccchHHHHHHHHHHHHHHHHhcCcccCCCCC
Confidence 455556778999999999999999999999999887655442 22223333345555566666567777665543
No 89
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.93 E-value=1.6e-23 Score=198.46 Aligned_cols=368 Identities=15% Similarity=0.098 Sum_probs=244.9
Q ss_pred cccchhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhc
Q 014698 37 GRRGRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARS 116 (420)
Q Consensus 37 g~~~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 116 (420)
+...........+++++.+++.|+.|||+.++++.+.+.++.+++++ ++|+++++++|+++|+|.|......+.+++|.
T Consensus 92 s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~-a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEi 170 (513)
T KOG0254|consen 92 GLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIAL-APSWYQLIVGRILTGLGVGGASVLAPVYISEI 170 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHHHhccchhhhhhcchhhHhhc
Confidence 45555666667778999999999999999999999999999999987 99999999999999999999999999999999
Q ss_pred CCccccchhhHHHHhhhhhHHHHHHhhHHHhhhc-cchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhh--
Q 014698 117 IPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN-LGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYIN-- 193 (420)
Q Consensus 117 ~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~-~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 193 (420)
.|++.||...+..+....+|..++..++....+. ++||..+.+..+++++..+..+++||+|++..++.++++....
T Consensus 171 ap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~~~a~~~l~ 250 (513)
T KOG0254|consen 171 APAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALGMLFLPESPRWLIEKGRLEEAKRSLK 250 (513)
T ss_pred CChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCChHHHHHHHH
Confidence 9999999999999999999999996666554433 5899999999999998777788999998875543333222110
Q ss_pred ---h--hhhhhhhh--------hhhcccccccchhhhhh----cHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCc
Q 014698 194 ---M--KKSLSASL--------EEMGESLKDVPWKAIFR----SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNL 256 (420)
Q Consensus 194 ---~--~~~~~~~~--------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 256 (420)
. +++..... .+......+..++++++ ++......+..+.+..+......|.+.++++. |.+.
T Consensus 251 ~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~-g~~~ 329 (513)
T KOG0254|consen 251 RLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSA-GLKS 329 (513)
T ss_pred HHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhc-CCCC
Confidence 0 00000000 00101111112333332 23344445555555555666677888888775 6654
Q ss_pred chhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhh---c-C-------CCcHHHHH
Q 014698 257 TEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSI---D-L-------GLPHWEIV 325 (420)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~-------~~~~~~~~ 325 (420)
.. .......++...++..+...+.||+||| ..+..+.....++..+... . . ......+.
T Consensus 330 ~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr---------~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (513)
T KOG0254|consen 330 DT-FLASIILGVVNFLGTLVATYLVDRFGRR---------KLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIV 399 (513)
T ss_pred ch-HHHHHHHHHHHHHHHHHHHHHHHHhccH---------HHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHH
Confidence 33 4555667777888888889999999964 3333333333332222211 1 1 11122222
Q ss_pred HHHHHHHHhhhhhhhhhh-hhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHH-H
Q 014698 326 GILTAGLALSSFALSGLY-CTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGT-I 403 (420)
Q Consensus 326 ~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~-~ 403 (420)
...+.-..+.....+..+ ...+.+|.+.|+++.++......+...+-......+.+..+ ....|...+..+.+... .
T Consensus 400 ~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~-~~~~f~~f~~~~~~~~~~f 478 (513)
T KOG0254|consen 400 FLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALG-IGGTFGYFGGICLLSLIIF 478 (513)
T ss_pred HHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchHHHHHHHHHHHHHHH
Confidence 222222223323333333 44566888999999999999999888877777666666542 33455555555555555 6
Q ss_pred HhhhccCCCCCCCC
Q 014698 404 VWLAFASSKPQNFS 417 (420)
Q Consensus 404 ~~~~~~~~~~~~~~ 417 (420)
++...+|+|.++.+
T Consensus 479 v~~~~pETkg~sle 492 (513)
T KOG0254|consen 479 VFFFVPETKGLTLE 492 (513)
T ss_pred heEEcccCCCCcHH
Confidence 77778888877644
No 90
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.93 E-value=7.8e-23 Score=187.94 Aligned_cols=340 Identities=10% Similarity=0.032 Sum_probs=219.2
Q ss_pred hhhhhccccccchhh-hhHHhHHhhhhcchhhh-----cchhHHHHHHHHH-HHHHHHHHHH--hhch-HHHHHHHHHHH
Q 014698 29 KKWVGLRIGRRGRIY-LKDTNLLELLRLPLLFV-----TWIRKVLQTGVLI-WSLATALLPL--LAGF-MPGLVLSRVLV 98 (420)
Q Consensus 29 ~~~l~~~~g~~~~l~-~~~~~~~~l~~~p~~~~-----~~~r~~~~~~~~~-~~~~~~~~~~--~~~~-~~~l~~~r~l~ 98 (420)
.++.+.+..+.+.+. ........++..|+.|+ .+|||..++.+.+ ........+. ..++ ...++..-++.
T Consensus 28 l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (390)
T TIGR02718 28 LREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLALVGPDVAGAGWAVGLLACA 107 (390)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHH
Confidence 344445555554432 12224456666776544 5677775444432 2211222221 1222 33445555666
Q ss_pred HhccccchhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCc
Q 014698 99 GIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGE 178 (420)
Q Consensus 99 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~ 178 (420)
++..+...+...++..|..++++++...+....+..+|.++|+...+++.+.+|||..|++.++..++..+..++++|++
T Consensus 108 ~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~~~~~ 187 (390)
T TIGR02718 108 SLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLWLKDRA 187 (390)
T ss_pred HHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 67777888888889999999888899999999999999999999999999999999999999988877555555555543
Q ss_pred ccCCCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcch
Q 014698 179 TSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTE 258 (420)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 258 (420)
+++++++ + .+..++++++|+|.++......++..........+.+.|++| .|+++++
T Consensus 188 ~~~~~~~-~---------------------~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ 244 (390)
T TIGR02718 188 VASPEAP-L---------------------ARRASLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEW 244 (390)
T ss_pred cCccccc-h---------------------hhHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHH
Confidence 2211100 0 001125678888988888877778777778888899999988 5999999
Q ss_pred hhHHHHhhHH-HHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHh-hc---CCCcHHHHHHHHHHHHH
Q 014698 259 AAWVSILPPL-ASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSS-ID---LGLPHWEIVGILTAGLA 333 (420)
Q Consensus 259 ~~~~~~~~~~-~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~g~~ 333 (420)
.|......+. ..+++.++.|++.||++++ | .................. .. ............+.++.
T Consensus 245 ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~-------~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (390)
T TIGR02718 245 IGRLGMAGGAVTVLLGCGGGAWLVRRAGLW-------R-TFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLI 316 (390)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHhhHH-------H-HHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHH
Confidence 9998887764 5667788999999999964 2 222222211111111111 11 11111222222333344
Q ss_pred hhhhhhhhhhhhhhccCc-cchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHH
Q 014698 334 LSSFALSGLYCTHQDISP-EYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLT 400 (420)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~ 400 (420)
.+...........+..++ +++++..+..+...++|..++|.+.|.+.|.. +++..|...+++.+++
T Consensus 317 ~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~-G~~~~f~~~~~~~l~a 383 (390)
T TIGR02718 317 TGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRF-GYAGGFLSGTVLAVLA 383 (390)
T ss_pred HHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccHHHHHHHHHHHHHH
Confidence 444444444555555665 88999999999999999999999999999986 6777777765544443
No 91
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.92 E-value=1.6e-22 Score=189.14 Aligned_cols=324 Identities=13% Similarity=0.114 Sum_probs=216.6
Q ss_pred hhhhccccccchhhhhHH---hHHhhhhcchhhh----cch-hHHHHHHHHHHHHHHHHHHHhhch------HHHHHHHH
Q 014698 30 KWVGLRIGRRGRIYLKDT---NLLELLRLPLLFV----TWI-RKVLQTGVLIWSLATALLPLLAGF------MPGLVLSR 95 (420)
Q Consensus 30 ~~l~~~~g~~~~l~~~~~---~~~~l~~~p~~~~----~~~-r~~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~r 95 (420)
..++.+....+.+..... .+...+.|++.|| +|| |+.++.+....+++.+++.. .++ ...+++.+
T Consensus 28 ~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~ 106 (437)
T TIGR00792 28 DVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFT-TPDFSATGKLVYAYITY 106 (437)
T ss_pred HccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHh-CCCCCcchHHHHHHHHH
Confidence 344444444444444333 3346666777887 454 55777888888887777654 443 45677788
Q ss_pred HHHHhccccchhhhHHHHHhcC-CccccchhhHHHHhhhhhHHHHHHhhHHHhhh-------ccchhHHHHHHHHHHHHH
Q 014698 96 VLVGIGEGVSPSAATDLIARSI-PLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE-------NLGWESVFYIFGLLGIAW 167 (420)
Q Consensus 96 ~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~-------~~gwr~~f~~~~~~~~~~ 167 (420)
++.+++.+...+...++..|.. +++||++..++.+.+..+|..+++.+.+.+.. ..+||+.+.+.+++.++.
T Consensus 107 ~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~ 186 (437)
T TIGR00792 107 ILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVS 186 (437)
T ss_pred HHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHH
Confidence 8889888887777788889987 56899999999999999988877766655542 458999999998887775
Q ss_pred HH-HhhhcccCcccCCCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhh
Q 014698 168 FS-GFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPT 246 (420)
Q Consensus 168 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (420)
.+ ..+..+|++++.++++ ++ +......++++++||+++...+..++..........+.+.
T Consensus 187 ~~~~~~~~~e~~~~~~~~~--~~-----------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (437)
T TIGR00792 187 LIICFFGTKERYSEIPKNI--EK-----------------KLSLKQIFKALFKNDQLLILCLAYLFYNLAFNIKNGVQVY 247 (437)
T ss_pred HHHHHcCCEecCCCCCccc--cc-----------------CCCHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcchhhe
Confidence 44 3445555432111100 00 0000112567888999998888888877777776667777
Q ss_pred HhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHH
Q 014698 247 YFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVG 326 (420)
Q Consensus 247 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (420)
|.++..+ ++.+.+.+.....++.+++.++.+++.||+|+| +. ...+.....+.........++.....+.
T Consensus 248 ~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~--------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (437)
T TIGR00792 248 YFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRK--------IL-FAGGILLMVLGYLIFFFAGSNLPLILVL 317 (437)
T ss_pred eEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH--------HH-HHHHHHHHHHHHHHHHHcchhHHHHHHH
Confidence 7766555 455667777778899999999999999999964 22 2233333333333333322223333444
Q ss_pred HHHHHHHhhhhhhhhhhhhhhccC-------ccchHHHHHHHHHhhhhhHHHHHHHHHHHhccC
Q 014698 327 ILTAGLALSSFALSGLYCTHQDIS-------PEYASILLGITNTVGAVPGIVGVALTGYLLDST 383 (420)
Q Consensus 327 ~~~~g~~~~~~~~~~~~~~~~~~~-------~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 383 (420)
.++.+++.+...+.......+..+ ++.+|++.|+.+....+|..+++.+.|.+.|..
T Consensus 318 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~ 381 (437)
T TIGR00792 318 IILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGII 381 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 455666666555555555444433 566899999999999999999999999999875
No 92
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.92 E-value=2.7e-22 Score=172.84 Aligned_cols=323 Identities=15% Similarity=0.084 Sum_probs=240.4
Q ss_pred hhhhhccccccchhhhhHHhHH---hhhhcchhhhcchhHHHHHHHHHHHHHHHHHHH--hhchHHHHHHHHHHHHhccc
Q 014698 29 KKWVGLRIGRRGRIYLKDTNLL---ELLRLPLLFVTWIRKVLQTGVLIWSLATALLPL--LAGFMPGLVLSRVLVGIGEG 103 (420)
Q Consensus 29 ~~~l~~~~g~~~~l~~~~~~~~---~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~r~l~G~~~~ 103 (420)
.+.+..+..+.+.+...++..+ ++..+.+.+|.+.|+-++.++.++++++.+..- ...++..++.+-++.|.|.+
T Consensus 40 ~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~lFila~Gi~ 119 (422)
T COG0738 40 KEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALFILASGIG 119 (422)
T ss_pred HHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhhH
Confidence 3344444444444444444433 455555589999999999999999999998741 25678889999999999999
Q ss_pred cchhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhc-------------------cchhHHHHHHHHHH
Q 014698 104 VSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN-------------------LGWESVFYIFGLLG 164 (420)
Q Consensus 104 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~-------------------~gwr~~f~~~~~~~ 164 (420)
...+.++.+++...|+++-.+.+++.+..+++|.+++|++++.+..+ -.||++|...+...
T Consensus 120 ~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~l 199 (422)
T COG0738 120 LLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPYLILAGLL 199 (422)
T ss_pred HHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 99999999999999998899999999999999999999999988762 13788888877776
Q ss_pred HHHHHHhhhcc--cCcccCCCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhh
Q 014698 165 IAWFSGFKILQ--EGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLS 242 (420)
Q Consensus 165 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (420)
++..+.....+ +.++..+++.+. ++....+++|+|+++...+..+++-.......+
T Consensus 200 vll~v~~~~~k~p~~~~~~~~~~~~----------------------~~~~~~~l~~~~~~~~gvl~~FlYVG~Eva~gs 257 (422)
T COG0738 200 VLLAVLILLSKLPDLQVAAPSLGAS----------------------GSAGLSSLFQNKHLRLGVLAIFLYVGAEVAIGS 257 (422)
T ss_pred HHHHHHHHhccCCcCCccccccccc----------------------ccchHHHHHhChHHHHHHHHHHHHHhHHHHHHH
Confidence 66554444333 222111111000 000246899999999999999999999999999
Q ss_pred hhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHH
Q 014698 243 WLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHW 322 (420)
Q Consensus 243 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (420)
+++.|+.+..|.+..++....+....+.++|++++.++.+|+.. .|.+...+......+..... .. ..+
T Consensus 258 fl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~--------~k~Laf~a~~~ill~~~~~l-~~--g~v 326 (422)
T COG0738 258 FLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKP--------EKYLAFYALIAILLLLAVAL-IG--GVV 326 (422)
T ss_pred HHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCH--------HHHHHHHHHHHHHHHHHHHH-hc--ChH
Confidence 99999999779999999999999999999999999999999875 33433333333333333222 22 355
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCce
Q 014698 323 EIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSW 386 (420)
Q Consensus 323 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~ 386 (420)
....+++.|.+.+...|.......+..| ++...+.+ .-.+..+|+++.|++.|++.|..|..
T Consensus 327 ~~~~l~~ig~F~simfPTIfslal~~l~-~~ts~~s~-~l~maivGGAiiP~l~G~i~d~~g~~ 388 (422)
T COG0738 327 ALYALFLIGLFNSIMFPTIFSLALKNLG-EHTSVGSG-LLVMAIVGGAIIPPLQGVIADMFGIQ 388 (422)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHhccC-ccccccce-eeeeheecchHHHHHHHHHHHhhhhH
Confidence 5667788899999888888888888887 44444333 35567789999999999999997433
No 93
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.92 E-value=1.9e-29 Score=236.54 Aligned_cols=365 Identities=16% Similarity=0.151 Sum_probs=244.5
Q ss_pred chhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhc---hHHHHHHHHHHHHhccccchhhhHHHHHhc
Q 014698 40 GRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAG---FMPGLVLSRVLVGIGEGVSPSAATDLIARS 116 (420)
Q Consensus 40 ~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 116 (420)
......+..+|+++.+.+.|++|||+.+..+.++..+++++.++ ++ +++.+.++|+++|++.|...+....++.|.
T Consensus 52 ~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~ 130 (451)
T PF00083_consen 52 TSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAF-APSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEI 130 (451)
T ss_pred HHHHHhhhcccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccc
Confidence 34445555667888888899999999999999999999999986 88 999999999999999999999999999999
Q ss_pred CCccccchhhHHHHhhhhhHHHHHHhhHHHhhhc---cchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhh
Q 014698 117 IPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN---LGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYIN 193 (420)
Q Consensus 117 ~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~---~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (420)
.|+++|++..++.+....+|..++..++..+.+. .+||..+.+.++++++..+...++||+|++...+.++++....
T Consensus 131 ~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~~~~~A~~~ 210 (451)
T PF00083_consen 131 APPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKGRDEEAEKV 210 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceecccccccccccc
Confidence 9999999999999999999999998887655433 3599999999999988777888999999876555444333221
Q ss_pred hhh-----hhhhhhhhh----ccc-ccccchhhhhhcHH----HHHHHHHHHHhHH-HHHHHhhhhhhHhhhhhCCCcch
Q 014698 194 MKK-----SLSASLEEM----GES-LKDVPWKAIFRSKA----VWAMIYAHFCGSW-GHYTCLSWLPTYFSEELSLNLTE 258 (420)
Q Consensus 194 ~~~-----~~~~~~~~~----~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~ 258 (420)
.++ ..+++.++. ++. .++.+++++++++. ............+ +......+.|..+++ .+.+..
T Consensus 211 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~-~~~~~~- 288 (451)
T PF00083_consen 211 LRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFEN-AGISNS- 288 (451)
T ss_pred cccccccccccccccccccccccccccceeeeeccccccccccccccccccccccccccccccccccccccc-cccccc-
Confidence 111 001111111 111 11134667777643 2222223332222 223444455666554 466655
Q ss_pred hhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHH----hhcCCC----cHHHHHHHHHH
Q 014698 259 AAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLS----SIDLGL----PHWEIVGILTA 330 (420)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~----~~~~~~~~~~~ 330 (420)
-.......+...++.+++..+.||+||| .....+.....++.... ....+. .........+.
T Consensus 289 -~~~~~~~~~~~~~~~~~~~~~~~~~GRr---------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~ 358 (451)
T PF00083_consen 289 -FLATLILGLVNFLGTLLAIFLIDRFGRR---------KLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALF 358 (451)
T ss_pred -cccccccccccccccccccccccccccc---------cccccccccccccccccccccccccccccccccccceeeeec
Confidence 2233445566667777788999999975 22223322222222221 111111 11222222222
Q ss_pred HHHhh-hhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhcc
Q 014698 331 GLALS-SFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFA 409 (420)
Q Consensus 331 g~~~~-~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (420)
....+ +..+.......|.+|++.|+++.|+.....++++.++|.+...+.+..+ ....+.+.++++++..+..+.+.+
T Consensus 359 ~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~-~~~~~~i~~~~~~i~~i~~~~~lp 437 (451)
T PF00083_consen 359 FAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLG-GWGVFLIFAGVCLIAIIFVYFFLP 437 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccc-ccccchhhHHHHHHHHhheeEEEe
Confidence 22222 2233333445677899999999999999999999999999998888764 344566666777777788888899
Q ss_pred CCCCCCCCC
Q 014698 410 SSKPQNFST 418 (420)
Q Consensus 410 ~~~~~~~~~ 418 (420)
|+|+++.+|
T Consensus 438 ET~g~~l~e 446 (451)
T PF00083_consen 438 ETKGKTLEE 446 (451)
T ss_pred eCCCCCHHH
Confidence 999887654
No 94
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.92 E-value=2.7e-22 Score=176.87 Aligned_cols=275 Identities=13% Similarity=0.069 Sum_probs=202.6
Q ss_pred hchHHHHHHHHHHHHhccccchhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhc--------------
Q 014698 85 AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN-------------- 150 (420)
Q Consensus 85 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~-------------- 150 (420)
.++++.+++.-++.|.|.+...+..+.++++..|+|++++.+++.+..+++|..++|.+++.+...
T Consensus 7 ~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~ 86 (310)
T TIGR01272 7 QRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANA 86 (310)
T ss_pred hhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhH
Confidence 678999999999999999999999999999999999999999999999999999999999987732
Q ss_pred --cchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHH
Q 014698 151 --LGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIY 228 (420)
Q Consensus 151 --~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (420)
.+||++|++.+.+.++..+.+.+.+.++.+++++ ++... + +. ...++.+|+|.++...+
T Consensus 87 ~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~~~~--~~~~~----~----------~~---~~~~~~~~~~~~~l~~~ 147 (310)
T TIGR01272 87 EAAKVHTPYLLLAGALAVLAIIFAFLPLPELQEADV--ARVSS----G----------DT---TQKTSAFQFTHLVLGAL 147 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcccc--ccccc----c----------cc---cchhhHHhhHHHHHHHH
Confidence 4799999987777655544444443222111110 00000 0 00 01135677888998888
Q ss_pred HHHHhHHHHHHHhhhhhhHhhhh--hCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHh
Q 014698 229 AHFCGSWGHYTCLSWLPTYFSEE--LSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSP 306 (420)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~ 306 (420)
..+++.....+...|.+.|+.+. +|+++.+.+...+....+.++|+++.+++.||++++ +.+ ..+....
T Consensus 148 ~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~--------~~l-~~~~~l~ 218 (310)
T TIGR01272 148 GIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQG--------RYL-AFNAFLA 218 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH--------HHH-HHHHHHH
Confidence 88888888999999999999864 689999999999999999999999999999999964 222 2333333
Q ss_pred HHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCce
Q 014698 307 AVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSW 386 (420)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~ 386 (420)
.+...+..... .........+.|++.+...+.......+..|+ +.+++.++. ....+|+++.|.+.|.+.|.. +.
T Consensus 219 ~~~~~l~~~~~--~~~~~~~~~l~g~~~s~i~P~~~s~a~~~~~~-~~~~asai~-~~~~~Gg~i~P~l~G~lad~~-g~ 293 (310)
T TIGR01272 219 VLLSIGAALTH--GYVAMWFVLALGLFNSIMFPTIFSLALNALGR-HTSQGSGIL-CLAIVGGAIVPLLQGSLADCL-GI 293 (310)
T ss_pred HHHHHHHHHcC--CHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-hhhhhHHHH-HHHHhcchHHHHHHHHHHHhc-cc
Confidence 33333332222 22233455667888887777777777676654 456677775 667799999999999999986 56
Q ss_pred eeeehh
Q 014698 387 SMSLFA 392 (420)
Q Consensus 387 ~~~~~~ 392 (420)
+.++++
T Consensus 294 ~~a~~v 299 (310)
T TIGR01272 294 QLAFAL 299 (310)
T ss_pred hHHHHH
Confidence 666654
No 95
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.91 E-value=6.5e-22 Score=183.66 Aligned_cols=343 Identities=14% Similarity=0.136 Sum_probs=235.9
Q ss_pred hhhhhcc--ccccchhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccch
Q 014698 29 KKWVGLR--IGRRGRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSP 106 (420)
Q Consensus 29 ~~~l~~~--~g~~~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~ 106 (420)
..++++. .............+...+.+.++|.+|||.+++.+.++..+++++++. ++|...++++..+.|+|.|...
T Consensus 71 ~~diG~~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~at-A~~~~~~iag~~l~GvgaG~~~ 149 (599)
T PF06609_consen 71 NADIGGSDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCAT-AQNMNTFIAGMVLYGVGAGVQE 149 (599)
T ss_pred HHhcCCCccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhc-CCcHHHHHHHHHHHHHhhHHHH
Confidence 5555554 233333344444555777777799999999999999999999999986 9999999999999999976665
Q ss_pred hhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHh--hhcccCcccCCCC
Q 014698 107 SAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGF--KILQEGETSNGAT 184 (420)
Q Consensus 107 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 184 (420)
.....++|..|.|.|....++.....-.....+|.++..+..+.+|||.|++..+...+.+++. +..|++++..+.+
T Consensus 150 -~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~fY~PP~~~~~~~~ 228 (599)
T PF06609_consen 150 -LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIFFFYFPPPRAQLHGR 228 (599)
T ss_pred -HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHhCCCchhhhccc
Confidence 4566799999999998888777766555556777787777667799999999988776644333 3333332211111
Q ss_pred cCc-cchh------------------------h-hhhhhhhhhh-----------------hhhc-c-cccccchhhhhh
Q 014698 185 LAP-RSNY------------------------I-NMKKSLSASL-----------------EEMG-E-SLKDVPWKAIFR 219 (420)
Q Consensus 185 ~~~-~~~~------------------------~-~~~~~~~~~~-----------------~~~~-~-~~~~~~~~~~~~ 219 (420)
+.. ++.- . ....+|++.. -|.. . +++..| .+++|
T Consensus 229 ~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F~~wE~~~~~~~Pl~P-~~Lf~ 307 (599)
T PF06609_consen 229 KLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAFVVWEWFGAPKDPLFP-HRLFK 307 (599)
T ss_pred cCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHHHHhhhhccCCCCcCC-HHHhc
Confidence 111 1110 0 0011222211 1221 1 233344 46788
Q ss_pred c-HHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcc---hhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHH
Q 014698 220 S-KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLT---EAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVR 295 (420)
Q Consensus 220 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~ 295 (420)
+ |.+....+..++....++....+.|......++-|+. +.++.....+++..++..+.+.+..++++- |
T Consensus 308 ~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~-------K 380 (599)
T PF06609_consen 308 DRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHI-------K 380 (599)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccch-------h
Confidence 7 5566666777777777888888999988888777663 567888888889999999999999888653 4
Q ss_pred HHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHH
Q 014698 296 KICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVAL 375 (420)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~ 375 (420)
..++....+..+.+-.+....+++....+...++.|++.+....+.....+-..|+++.|++.|+..+++.+|+.+|..+
T Consensus 381 w~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aI 460 (599)
T PF06609_consen 381 WQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAI 460 (599)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHH
Confidence 44334443444333334444455455555556777888887776766666666899999999999999999999999998
Q ss_pred HHHHhc
Q 014698 376 TGYLLD 381 (420)
Q Consensus 376 ~g~l~~ 381 (420)
...+..
T Consensus 461 y~~I~~ 466 (599)
T PF06609_consen 461 YNAIFT 466 (599)
T ss_pred HHHHHH
Confidence 877664
No 96
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.90 E-value=2.6e-20 Score=171.98 Aligned_cols=334 Identities=16% Similarity=0.140 Sum_probs=239.5
Q ss_pred hhcchhhhcc-hhHHHHHHHHHHHHHHHHHHHhhch-HHHHHHHHHHHHhccccchhhhHHHHHhcCCcccc--------
Q 014698 53 LRLPLLFVTW-IRKVLQTGVLIWSLATALLPLLAGF-MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEER-------- 122 (420)
Q Consensus 53 ~~~p~~~~~~-~r~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r-------- 122 (420)
+-+.+.|..+ ||+.+.....+..+.+....+..++ ++...+.-++.-++.+...+...+++.|..+++++
T Consensus 89 ~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~LP~la~~~~~~~~~~~~~ 168 (477)
T PF11700_consen 89 FLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAYLPDLARPEPRVRAAREPS 168 (477)
T ss_pred HHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCChhhhhhhhhh
Confidence 3334467777 5556666666666677766654344 44444555555567778888889999999998888
Q ss_pred ------------------chhhHHHHhhhhhHHHHHHhhHHHhhhc--------cchhHHHHHHHHHHHHH-HHHhhhcc
Q 014698 123 ------------------SRAVSFVFGGLSFGSVAGLLLAPPIIEN--------LGWESVFYIFGLLGIAW-FSGFKILQ 175 (420)
Q Consensus 123 ------------------~~~~~~~~~~~~~g~~~g~~l~~~l~~~--------~gwr~~f~~~~~~~~~~-~~~~~~~~ 175 (420)
++..+.-.+...+|.++.-.+.-.+... .+-|..+.+.++.-++. +...+++|
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~~~a~ww~vfsiP~~~~~~ 248 (477)
T PF11700_consen 169 ANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFLIVALWWLVFSIPLFLWLP 248 (477)
T ss_pred ccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999988877776554321 23588888888876664 45556666
Q ss_pred cCcccCCCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCC
Q 014698 176 EGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLN 255 (420)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 255 (420)
|.+++++.+..... .....++. ...++++.|+|.....++..+++.-+...+......|.++++|++
T Consensus 249 ~~~~~~~~~~~~~~--------~~~g~~~l-----~~t~k~~~~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s 315 (477)
T PF11700_consen 249 DRPGPRPLPSGSSY--------LRFGFKRL-----WRTFKEIRKLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMS 315 (477)
T ss_pred CCCCCCCCCcchhH--------HHHHHHHH-----HHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcC
Confidence 66543222111100 01111111 112456677899999999999999999999999999999999999
Q ss_pred cchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHh-HHHHHHHh------hcCCCcHHHHHHHH
Q 014698 256 LTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSP-AVCMTLSS------IDLGLPHWEIVGIL 328 (420)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~~~~~~~ 328 (420)
..+...+.....+.+++|.++.+++.||+|.| ++..+..+.... .+...... ...++.+...+..+
T Consensus 316 ~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k-------~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~ 388 (477)
T PF11700_consen 316 TTQLIVFGLVVQIVAIIGALLFGWLQDRFGPK-------TKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAV 388 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-------hhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHH
Confidence 99999999999999999999999999999976 222222222222 22221111 11333455566667
Q ss_pred HHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhh
Q 014698 329 TAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWL 406 (420)
Q Consensus 329 ~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (420)
+.|++.|..+....+...+..|+++.+..+|++.......+.+||.+.|.+.|.+|+.+..+....++.+++.++++.
T Consensus 389 ~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~ 466 (477)
T PF11700_consen 389 LIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFF 466 (477)
T ss_pred HHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhh
Confidence 889999999999999999999999999999999999999999999999999999988888888877666655555533
No 97
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.89 E-value=1.7e-22 Score=175.99 Aligned_cols=368 Identities=17% Similarity=0.123 Sum_probs=245.5
Q ss_pred cccchhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhc-------hHHHHHHHHHHHHhccccchhhh
Q 014698 37 GRRGRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAG-------FMPGLVLSRVLVGIGEGVSPSAA 109 (420)
Q Consensus 37 g~~~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~r~l~G~~~~~~~~~~ 109 (420)
++....-..++.+|+++-|.++|++|||+++...+++..++++++++ +. -..++...|++.|+|.|+-+|.+
T Consensus 87 ~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~-s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlS 165 (538)
T KOG0252|consen 87 ALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGL-SVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLS 165 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhcc-CCCCCCCcchhhHHHHHHHHhhccccCCCcch
Confidence 34444556677788999999999999999999999999999987664 31 25789999999999999999999
Q ss_pred HHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhc---------------cchhHHHHHHHHHHHHHHHHhhhc
Q 014698 110 TDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN---------------LGWESVFYIFGLLGIAWFSGFKIL 174 (420)
Q Consensus 110 ~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~---------------~gwr~~f~~~~~~~~~~~~~~~~~ 174 (420)
.++.+|...+++||...+...+....|...|.+++-.+..- .=||..+.+.+++++..+...+.+
T Consensus 166 AtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M 245 (538)
T KOG0252|consen 166 ATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKM 245 (538)
T ss_pred HHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcC
Confidence 99999999999999999999999999999888877655421 139999999999999988888889
Q ss_pred ccCcccCCCCcCccch-hhhhhhhhhhhh-----hhhcccccccc---hhhhhhc---HHHHHHHHHHHHhHHHHHHHhh
Q 014698 175 QEGETSNGATLAPRSN-YINMKKSLSASL-----EEMGESLKDVP---WKAIFRS---KAVWAMIYAHFCGSWGHYTCLS 242 (420)
Q Consensus 175 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~~~~~---~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 242 (420)
||+++.+.-..++.+. ....++...... .+...+.+..+ +.+.+.. +.+......+|..-.++|....
T Consensus 246 ~Et~~Y~al~~~~~~~a~~d~~k~~~~~~~~~~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~nL 325 (538)
T KOG0252|consen 246 PETARYTALVSKKLKQAAGDMKKVLSVDIEAESTAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQNL 325 (538)
T ss_pred CcchhHHHHhhcCHhhhhhccccccccccchhhccccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccc
Confidence 9987755211111000 000000000000 00001111111 2222222 4556667788888888888888
Q ss_pred hhhhHhhhhhCCCcchhhH--------HHHhhH-HHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHH
Q 014698 243 WLPTYFSEELSLNLTEAAW--------VSILPP-LASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLS 313 (420)
Q Consensus 243 ~~~~~~~~~~g~~~~~~~~--------~~~~~~-~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (420)
+....+++. |+.+..... ...+.. .+.++|..+...++|++| |+.....++.+..+..+..
T Consensus 326 ~~s~I~~~i-g~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iG---------Rk~iq~~GF~~~~i~~~~~ 395 (538)
T KOG0252|consen 326 FQSVIFSAI-GVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIG---------RKYIQLMGFFIMTIFFFVI 395 (538)
T ss_pred HHHHHHHhh-ccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhh---------hHHHHHhhHHHHHHHHHHH
Confidence 888888753 665544333 112222 233346667788999999 5566667777666666655
Q ss_pred hhcCCCcHH--HHHHHHHHHHHhhhhhhhhh--hhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhc-----cCC
Q 014698 314 SIDLGLPHW--EIVGILTAGLALSSFALSGL--YCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLD-----STH 384 (420)
Q Consensus 314 ~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~-----~~~ 384 (420)
....++..- -...+..+..+++.+.+... ....+.+|.+.|+++.|+....+-.|++++...+.++.+ ..
T Consensus 396 ~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~- 474 (538)
T KOG0252|consen 396 AGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNI- 474 (538)
T ss_pred cCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccc-
Confidence 554442111 11111111222222333333 233466888999999999999999999999999999998 43
Q ss_pred ceeeeehhhhHHHHHHHHHHhhhccCCCCCCCC
Q 014698 385 SWSMSLFAPSIFFYLTGTIVWLAFASSKPQNFS 417 (420)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (420)
+...++++.++++.+..+..+++ +|+++++.+
T Consensus 475 g~~~v~~i~~~~~~~gi~~T~l~-pEtk~~~le 506 (538)
T KOG0252|consen 475 GVRNVFIILAGCMLLGILFTLLI-PETKGKSLE 506 (538)
T ss_pred cchHHHHHHHHHHHHhHheeEEe-ecccccCHH
Confidence 67778888877666665555444 477766543
No 98
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.89 E-value=4.8e-20 Score=167.11 Aligned_cols=308 Identities=15% Similarity=0.115 Sum_probs=220.4
Q ss_pred HHhHHhhhhcchhhhcc-hhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCccccch
Q 014698 46 DTNLLELLRLPLLFVTW-IRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSR 124 (420)
Q Consensus 46 ~~~~~~l~~~p~~~~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~ 124 (420)
...+...+.+.+.||.. +||++.+..++.++....... .++++.++..-++..+......|...++.-+..+ ++++
T Consensus 49 ~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~-~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~--~~~~ 125 (400)
T PF03825_consen 49 ARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAF-SSSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG--DRGK 125 (400)
T ss_pred HHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc--cccC
Confidence 33445667777799887 777887777777766655554 7888888888888888888888998888888875 4566
Q ss_pred hhHHHHhhhhhHHHHHHhh-HHHhhhccch---hHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhhhhhhhh
Q 014698 125 AVSFVFGGLSFGSVAGLLL-APPIIENLGW---ESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSA 200 (420)
Q Consensus 125 ~~~~~~~~~~~g~~~g~~l-~~~l~~~~gw---r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (420)
-.|-.....++|.+++... ++.+....++ ...+++.+...++.....+.+|+.+++++.++..+
T Consensus 126 ~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~~~~l~lp~~~~~~~~~~~~~------------ 193 (400)
T PF03825_consen 126 DYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLAGFALFLPKTPPKRSAKESVK------------ 193 (400)
T ss_pred CCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHHHhCCCCccccccCCCcc------------
Confidence 6777888888888877554 2333333232 34566666555555555566777663322211100
Q ss_pred hhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhh
Q 014698 201 SLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQF 280 (420)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l 280 (420)
+....+..+++|+|++....+..++..........+.+.|+++..|.+....+...++..++.++.-...+++
T Consensus 194 -------~~~~~~~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~ 266 (400)
T PF03825_consen 194 -------KLLGLDALKLLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRF 266 (400)
T ss_pred -------cccchHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0111123478999999999989898888888899999999998744777888888888888999999999999
Q ss_pred hhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHH----HHHHHHhhhhhhhhhhhhhhccCccchHH
Q 014698 281 ADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGI----LTAGLALSSFALSGLYCTHQDISPEYASI 356 (420)
Q Consensus 281 ~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~g~ 356 (420)
.+|+|. +..+..+....++=..+.....++.+...... .+-|..++.........+.+..|++.|++
T Consensus 267 ~~r~g~---------~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at 337 (400)
T PF03825_consen 267 LKRFGI---------KWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRAT 337 (400)
T ss_pred HHhcCH---------HHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHH
Confidence 999984 35555566666666555555433233222222 35788888777788888888899999999
Q ss_pred HHHHHHHh-hhhhHHHHHHHHHHHhccCC
Q 014698 357 LLGITNTV-GAVPGIVGVALTGYLLDSTH 384 (420)
Q Consensus 357 ~~g~~~~~-~~~g~~~~~~~~g~l~~~~~ 384 (420)
+.++++.. ..+|..+|..++|+++|+.+
T Consensus 338 ~Q~l~~~~~~Glg~~iG~~igG~l~~~~g 366 (400)
T PF03825_consen 338 AQGLYSALSFGLGGAIGSLIGGWLYDAFG 366 (400)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHhc
Confidence 99999876 56999999999999999874
No 99
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.88 E-value=4.1e-20 Score=173.97 Aligned_cols=347 Identities=11% Similarity=0.098 Sum_probs=204.1
Q ss_pred hhhhcchhhh-cchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCccc--cchhhH
Q 014698 51 ELLRLPLLFV-TWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEE--RSRAVS 127 (420)
Q Consensus 51 ~l~~~p~~~~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~--r~~~~~ 127 (420)
..+++.+.|| .+||+++..+.++..++..++++..++.+.+.+.|+++|++.|...+...++++|++|+++ |..+++
T Consensus 74 ~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~ 153 (500)
T PRK09584 74 VAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFT 153 (500)
T ss_pred HHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcch
Confidence 4577888999 5999999999999999988887522456677789999999999999999999999998653 456889
Q ss_pred HHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHH----hhhcccCcccCCCCcCccchhhh----------
Q 014698 128 FVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSG----FKILQEGETSNGATLAPRSNYIN---------- 193 (420)
Q Consensus 128 ~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~---------- 193 (420)
+.+.+.++|..+||.+++++.+.+|||+.|++.++..++..+. ...++|..++.++++.|......
T Consensus 154 ~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (500)
T PRK09584 154 MYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVVALIA 233 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999977644443222 22333322111111111111000
Q ss_pred ------hhhhhhhhh---------hhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhh--hhCCCc
Q 014698 194 ------MKKSLSASL---------EEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSE--ELSLNL 256 (420)
Q Consensus 194 ------~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~ 256 (420)
...+..... ...... ....++.-|+| .+... ..++....++......|.++.. ..+.+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~-~~~~~~i~f~~~~~q~~~~l~~~~~~~~~~ 309 (500)
T PRK09584 234 IATWLLHNQEIARMALGVVALGIVVIFGKE--AFAMKGAARRK-MIVAF-ILMLEAIIFFVLYSQMPTSLNFFAIRNVEH 309 (500)
T ss_pred HHHHHHhcchHHHHHHHHHHHHHHHHHHHH--HhhcCHHHHHH-HHHHH-HHHHHHHHHHHHHHHhccHHHHHHHHhccc
Confidence 000000000 000000 00001122222 22222 2223344455555555555443 111221
Q ss_pred ------chhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCC--------CcHH
Q 014698 257 ------TEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLG--------LPHW 322 (420)
Q Consensus 257 ------~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~ 322 (420)
...+++.+...+..++..++.+++-+|.++|.. .......++.+.++++........ +.++
T Consensus 310 ~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~-----~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~ 384 (500)
T PRK09584 310 SILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRLP-----MPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNW 384 (500)
T ss_pred cccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCCC-----cHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHH
Confidence 225566677777777777777666666654421 112233333333333333221111 1335
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhc---------cCCceeeeehhh
Q 014698 323 EIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLD---------STHSWSMSLFAP 393 (420)
Q Consensus 323 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~---------~~~~~~~~~~~~ 393 (420)
.....++.+++.....+.....+.+..|++.||+++|.......+|..++..+.+.... ..+++...|...
T Consensus 385 ~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 464 (500)
T PRK09584 385 LIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQI 464 (500)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHH
Confidence 66667888999998888888888888999999999998776666666666555542211 012345566666
Q ss_pred hHHHHHHHHHHhh
Q 014698 394 SIFFYLTGTIVWL 406 (420)
Q Consensus 394 ~~~~~~~~~~~~~ 406 (420)
++..++.+++.+.
T Consensus 465 ~~~~~~~a~~~~~ 477 (500)
T PRK09584 465 GIATAVIAVLMLL 477 (500)
T ss_pred HHHHHHHHHHHHH
Confidence 6555544444443
No 100
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.88 E-value=5.8e-21 Score=170.45 Aligned_cols=333 Identities=13% Similarity=-0.004 Sum_probs=217.8
Q ss_pred hhhhhccccc-cchhhhh---HHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhcccc
Q 014698 29 KKWVGLRIGR-RGRIYLK---DTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGV 104 (420)
Q Consensus 29 ~~~l~~~~g~-~~~l~~~---~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~ 104 (420)
.++++.+..+ .+.++.. .+.+..+..+.+.||.+.||++..+.+.+++.+++.++ ++++..+.+.|++.|++.|.
T Consensus 53 ~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~f-a~Sl~~L~i~R~llGvaEA~ 131 (511)
T TIGR00806 53 LTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLL-GTSVWHMQLMEVFYSVTMAA 131 (511)
T ss_pred HHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 4455554444 4444444 44555777777799999999999999999999999987 89999999999999999999
Q ss_pred chhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHH---HHHHHHHHHhhhcccCcccC
Q 014698 105 SPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFG---LLGIAWFSGFKILQEGETSN 181 (420)
Q Consensus 105 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~---~~~~~~~~~~~~~~~~~~~~ 181 (420)
.. +...++.+|+|+++|+++.++..++..+|.+++++++++ ...+|||+-+.+.- ....+..+..+++|..++..
T Consensus 132 ~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP~~~~sl 209 (511)
T TIGR00806 132 RI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISLVFMTFSVFLALFLKRPKRSL 209 (511)
T ss_pred HH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHHHHHHHHHHHHhCCCCchhh
Confidence 99 999999999999999999999999999999999999999 55679998665432 22233556667777544421
Q ss_pred ---CCCcCc-c---c-hhhhhhhhhhhh--hhhhc---ccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHh
Q 014698 182 ---GATLAP-R---S-NYINMKKSLSAS--LEEMG---ESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYF 248 (420)
Q Consensus 182 ---~~~~~~-~---~-~~~~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (420)
+++..+ . + +....++..... .+... -..-..++++..+||.++.-.+-..+...+++.+.+|.-...
T Consensus 210 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~a~~g~~qv~~Y~Q~LW 289 (511)
T TIGR00806 210 FFNRLEDVRGALPCELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWVFNSAGYYLITYYVHTLW 289 (511)
T ss_pred hhccccccccccccccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHHHHhhHHHHHHHHHHHHH
Confidence 110000 0 0 000000000000 00000 000112345567788888777777777788888887777766
Q ss_pred hhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHH
Q 014698 249 SEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGIL 328 (420)
Q Consensus 249 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (420)
.+..+-++...|.+-++..+.+.+..+..|++-.++.+- ....+.+...+.+..+++... .++.+...+..+
T Consensus 290 ~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w~~~-------~~l~l~v~s~~~~gll~~m~~-t~~Iw~~Y~~yv 361 (511)
T TIGR00806 290 GTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRWARW-------SKLLIAVVSAIQAGLVFWMSQ-SHDIWVLYVTYV 361 (511)
T ss_pred HHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCchhh-------HHHHHHHHHHHHHHHhhhhhc-ccchHHHHHHHH
Confidence 654332223567777777788888888888885554321 233333333333333333333 333455555667
Q ss_pred HHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHH
Q 014698 329 TAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVG 372 (420)
Q Consensus 329 ~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~ 372 (420)
+++..+....+....-+......+..|...|+++++.-+-..+-
T Consensus 362 lf~~~y~flitia~~~iA~~L~~~~~aLvFGiNtfvAl~LQtil 405 (511)
T TIGR00806 362 LFRGIYQFLVPIATFQIASSLSKELCALVFGINTFVATALKTII 405 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccceEEEEecHHHHHHHHHHhe
Confidence 77777766666666666666777888999999877655544443
No 101
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.87 E-value=1.6e-21 Score=159.10 Aligned_cols=319 Identities=13% Similarity=0.112 Sum_probs=210.9
Q ss_pred hhhhHHhHHhhhhcchhhhcc-hhHHHHHHHHHHHHHHHHHH--HhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCC
Q 014698 42 IYLKDTNLLELLRLPLLFVTW-IRKVLQTGVLIWSLATALLP--LLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIP 118 (420)
Q Consensus 42 l~~~~~~~~~l~~~p~~~~~~-~r~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~ 118 (420)
.++....+...+++.+.||+. -|..-.+-++...++.++.+ -..+.+|+++.+|++.|+|.-..-++..+++..|+.
T Consensus 87 vYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFK 166 (459)
T KOG4686|consen 87 VYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFK 166 (459)
T ss_pred eccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEec
Confidence 344445566888888888887 33333333333334444332 236889999999999999988888899999999999
Q ss_pred ccccchhhHHHHhhhhhHHHHHHhhHHHhhhccch------hHH---HHHHHHH-HHHHHHHh--hhcccCcccCCCCcC
Q 014698 119 LEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGW------ESV---FYIFGLL-GIAWFSGF--KILQEGETSNGATLA 186 (420)
Q Consensus 119 ~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw------r~~---f~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~ 186 (420)
.||.+.++|+.....-+|..+--.+.+++.+..+= +.. ....+.. +...++.. .-..+++.+ +.-..
T Consensus 167 GKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~~~~~~~ghT~LG~~l~~~~~tc~~slical~lg~~D~rAe-rilh~ 245 (459)
T KOG4686|consen 167 GKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMGRMFPGVGHTLLGLWLCFEVKTCKQSLICALSLGLSDDRAE-RILHL 245 (459)
T ss_pred CccccchhhHHHHHHHhhceeeeeecHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHH-HHHhh
Confidence 99999999999999999998877777777664320 011 1111111 11111111 111111110 00000
Q ss_pred ccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhh
Q 014698 187 PRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILP 266 (420)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 266 (420)
++ . ...|..+-....++ .|++|.+.+..+++..+.+.+...-|.++++.+|+|+.+++.+.+..
T Consensus 246 e~-g----------~~Ge~pkLtdv~~f-----~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~v 309 (459)
T KOG4686|consen 246 EE-G----------FLGEEPKLTDVNTF-----YPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTV 309 (459)
T ss_pred hc-C----------cccCCccccccccc-----CccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhh
Confidence 00 0 00000000000111 58899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhh
Q 014698 267 PLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTH 346 (420)
Q Consensus 267 ~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 346 (420)
.....+.+++.|.++||.|++ ..+. ..+.+.....-....+..-++ ...+.+.|+......-.....+.
T Consensus 310 y~Isav~spvfg~i~Dk~G~n-------~~wv-~~a~~~tl~~H~~l~Ft~lsP---y~~m~~lGLsysllAcslWP~va 378 (459)
T KOG4686|consen 310 YGISAVLSPVFGAISDKYGFN-------LWWV-ASACILTLLGHSGLFFTFLSP---YTSMTFLGLSYSLLACSLWPCVA 378 (459)
T ss_pred hhhhhhhhhhHHHhHhhhcce-------ehhH-HHHHHHHHHHhhhHHhhhccH---HHHHHHHhhhHHHHHHHHhhhhh
Confidence 999999999999999999964 2222 222222222222222222222 34455567777655555566666
Q ss_pred hccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceee
Q 014698 347 QDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSM 388 (420)
Q Consensus 347 ~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~ 388 (420)
..+|.++-|++.|..+.++++|-++.|.+.|.+.|.-|+|..
T Consensus 379 ~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~ 420 (459)
T KOG4686|consen 379 SLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDN 420 (459)
T ss_pred hhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhh
Confidence 778999999999999999999999999999999998876643
No 102
>PTZ00207 hypothetical protein; Provisional
Probab=99.86 E-value=4.1e-19 Score=166.28 Aligned_cols=372 Identities=12% Similarity=0.032 Sum_probs=240.8
Q ss_pred hhhhhccccccchhhhhHHhH--HhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhh------chHHHHHHHHHHHHh
Q 014698 29 KKWVGLRIGRRGRIYLKDTNL--LELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLA------GFMPGLVLSRVLVGI 100 (420)
Q Consensus 29 ~~~l~~~~g~~~~l~~~~~~~--~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~------~~~~~l~~~r~l~G~ 100 (420)
..+++.+..+.+.+...+... .++..|++.|++|+|+++.++.+++.++++++++ + ++++.+.+.|++.|+
T Consensus 54 ~~~lgls~~~l~~i~svg~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~al-a~~~~i~~s~~~l~l~r~l~G~ 132 (591)
T PTZ00207 54 QARYNLTQRDLSTITTVGIAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFAL-TFQEVIEGSVVRLSVYNGLMTL 132 (591)
T ss_pred HHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH-HhcccccCcHHHHHHHHHHHHH
Confidence 333443444444443332222 3446788899999999999999999999999886 5 689999999999999
Q ss_pred ccccchhhhHHHHHhcCCccccchhhHHHHhhhhhHHHH-HHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcc
Q 014698 101 GEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVA-GLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGET 179 (420)
Q Consensus 101 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~-g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~ 179 (420)
|.+...+.....+.+|+| ++||++.|+...+.++|.++ +++..+++. .+|+..|++.+++.++..+....+.++++
T Consensus 133 G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~--~~~~~~fl~l~vl~~vv~ll~~~~vr~p~ 209 (591)
T PTZ00207 133 GCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS--DNTSAYFFFLMSFALVVGILAIVFMRLPP 209 (591)
T ss_pred HHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhHHHHHHHHHHHHHHHHHHHHhheeCCc
Confidence 999999999999999997 78999999999999999976 555555444 36899999988888775444433333332
Q ss_pred cCC---CC----cCccc-----------------h------------------------------------h-hh-----
Q 014698 180 SNG---AT----LAPRS-----------------N------------------------------------Y-IN----- 193 (420)
Q Consensus 180 ~~~---~~----~~~~~-----------------~------------------------------------~-~~----- 193 (420)
... ++ +.++. . . ..
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~v~~~lll~ 289 (591)
T PTZ00207 210 FHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPLQGALVAYLKLGSNFKVGFAVTVIVLTVI 289 (591)
T ss_pred chhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 111 11 11110 0 0 00
Q ss_pred -h--------------h-hhhh-h-hh---------hh-------hc--ccccccchhhhhhcHHHHHHHHHHHHhHHHH
Q 014698 194 -M--------------K-KSLS-A-SL---------EE-------MG--ESLKDVPWKAIFRSKAVWAMIYAHFCGSWGH 237 (420)
Q Consensus 194 -~--------------~-~~~~-~-~~---------~~-------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (420)
. + ++.. + +. .+ .+ .+....++++.+++..+|.+.+..++.....
T Consensus 290 ~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~t~~q~l~~~d~Wll~~~~~cg~g~g 369 (591)
T PTZ00207 290 FPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDYIAPQFQETFIEGLKTARLWCLLWSIFCCVGAH 369 (591)
T ss_pred HHHHhhhHHHhccCCcCCCccccccccccccccccccccccccccccCCCCCCcchHHHHHhchhHHHHHHHHHHhhCch
Confidence 0 0 0000 0 00 00 00 0111125677888999999999999988888
Q ss_pred HHHhhhhhhHhhhhhCCCcch--hhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhh
Q 014698 238 YTCLSWLPTYFSEELSLNLTE--AAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSI 315 (420)
Q Consensus 238 ~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (420)
......+.+..+..-|.+.+. ...+.++.++.+.+|++..|.+.....+|+..+...|...+.+..+.....+++...
T Consensus 370 l~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~~~~~~lll~~~ 449 (591)
T PTZ00207 370 FVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSVCIITMLTLFLT 449 (591)
T ss_pred heeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHHHHHHHHHHHHH
Confidence 888888888877643663322 233678999999999999999884443332111112344444444432333332222
Q ss_pred cCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHH-HHHHHHHhccCC----c-----
Q 014698 316 DLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVG-VALTGYLLDSTH----S----- 385 (420)
Q Consensus 316 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~-~~~~g~l~~~~~----~----- 385 (420)
.+ ...+.+..++.|++.|.........+.+.+. ++-|+-.-+.....-+|+.+- -.+.|.++|+-. +
T Consensus 450 ~p--~~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G 526 (591)
T PTZ00207 450 LP--KAALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTE 526 (591)
T ss_pred CC--ccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCC
Confidence 22 1456777888899999777777777777777 888888777777777777766 567788887531 1
Q ss_pred ---eeeeehhhhHHHHHHHHHHhhh
Q 014698 386 ---WSMSLFAPSIFFYLTGTIVWLA 407 (420)
Q Consensus 386 ---~~~~~~~~~~~~~~~~~~~~~~ 407 (420)
+..+|++.++.++.+.+....+
T Consensus 527 ~~C~~~~~~v~~~~~~~g~~~s~~l 551 (591)
T PTZ00207 527 RVCVVMPLAFLLGLSFLAFITSTYV 551 (591)
T ss_pred ceeeHhHHHHHHHHHHHHHHHHhhe
Confidence 4567777777676666654443
No 103
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.85 E-value=1.1e-18 Score=160.22 Aligned_cols=362 Identities=11% Similarity=0.089 Sum_probs=228.3
Q ss_pred hhhccccccchhhhhHHhHH---hhhhcchhhh----cchhHHHHHH-HHHHHHHHHHHHHhhchHH-------------
Q 014698 31 WVGLRIGRRGRIYLKDTNLL---ELLRLPLLFV----TWIRKVLQTG-VLIWSLATALLPLLAGFMP------------- 89 (420)
Q Consensus 31 ~l~~~~g~~~~l~~~~~~~~---~l~~~p~~~~----~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~------------- 89 (420)
.++.+....+.+.......+ +.+.|.++|| +||||.++.+ .....++..+.++ +++..
T Consensus 33 ~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~-~~~~~~~~~~~~~~~~~~ 111 (477)
T TIGR01301 33 ELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGF-AADIGHLFGDNLDKKTKP 111 (477)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHh-Cchhhhhccccccccchh
Confidence 33444444444433333333 4555666894 8888887765 5555555555554 55432
Q ss_pred ----HHHHHHHHHHhccccchhhhHHHHHhcCCcccc--chhhHHHHhhhhhHHHHHHhhHHHh--hhcc----------
Q 014698 90 ----GLVLSRVLVGIGEGVSPSAATDLIARSIPLEER--SRAVSFVFGGLSFGSVAGLLLAPPI--IENL---------- 151 (420)
Q Consensus 90 ----~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~g~~~g~~l~~~l--~~~~---------- 151 (420)
.++++-.+..++.....+...++++|.+|+++| +.+.++.+...++|.++|+.+++.. .+.+
T Consensus 112 ~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~ 191 (477)
T TIGR01301 112 RAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGV 191 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhccccccccccc
Confidence 222233334447777778889999999998765 5899999999999999999999875 2211
Q ss_pred ---chhHHHHHHHHHHHHH-HHHhhhcccCcccCCCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhh-----cHH
Q 014698 152 ---GWESVFYIFGLLGIAW-FSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFR-----SKA 222 (420)
Q Consensus 152 ---gwr~~f~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 222 (420)
+.|..|++.++..++. .+..+..+|+++.++++..+++.+.. ++...+..++++++ .|.
T Consensus 192 ~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~i~~~~~~mP~~ 259 (477)
T TIGR01301 192 SCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINSEAAPP------------SKHGEEAFFGELFGAFKYLPRP 259 (477)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhhhcccc------------cccchhhhHHHHHHHHHHCCHH
Confidence 5688999988877664 45566677766433221110000000 00000111233333 367
Q ss_pred HHHHHHHHHHhHHHHHHHhhhhhhHhh-hhhCCCcchh----------hHHHHhhHHHHHHHHHhhhhhhhhhhhcCcch
Q 014698 223 VWAMIYAHFCGSWGHYTCLSWLPTYFS-EELSLNLTEA----------AWVSILPPLASVLVTSIAAQFADNLIATGVET 291 (420)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~----------~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~ 291 (420)
++.+++..++.+++.+.+..|.+.|.. +.++.++.+. .+......+...+.+++..++.+|+|+
T Consensus 260 m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~----- 334 (477)
T TIGR01301 260 VWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGA----- 334 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----
Confidence 889999999999999999999998876 4565443211 122334444555666677778888874
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHhhcCC------C--------------cHHHHHHHHHHHHHhhhhhhhhhhhhhhccCc
Q 014698 292 TMVRKICQTIAFLSPAVCMTLSSIDLG------L--------------PHWEIVGILTAGLALSSFALSGLYCTHQDISP 351 (420)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~--------------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 351 (420)
||.....+.++.+.++....+... . ....++.+...|+..+.........+.+..++
T Consensus 335 ---~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~ 411 (477)
T TIGR01301 335 ---GKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSN 411 (477)
T ss_pred ---chhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccc
Confidence 233334443333333333221110 0 13445556778898888888888888888884
Q ss_pred --cchHHHHHHHHHhhhhhHHHHHHHHHHHhccCC-ceeeeehhhhHHHHHHHHHHhhhccCCCC
Q 014698 352 --EYASILLGITNTVGAVPGIVGVALTGYLLDSTH-SWSMSLFAPSIFFYLTGTIVWLAFASSKP 413 (420)
Q Consensus 352 --~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (420)
+..|..+|+.|.+..+.+.+.....|.+.+..| +....+.+.++.++++++..++..++.++
T Consensus 412 ~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~~~~ 476 (477)
T TIGR01301 412 LGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPRPRV 476 (477)
T ss_pred cCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 556999999999999999999998888776665 45556666677777777777777776654
No 104
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.84 E-value=7e-19 Score=164.25 Aligned_cols=330 Identities=12% Similarity=-0.006 Sum_probs=206.6
Q ss_pred hhhhcchhhhcc-----hhHHHHHHHHHHH-HHHHHHHHhhch-HHHHHHHHHHHHhccccchhhhHHHHHhcCCccccc
Q 014698 51 ELLRLPLLFVTW-----IRKVLQTGVLIWS-LATALLPLLAGF-MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERS 123 (420)
Q Consensus 51 ~l~~~p~~~~~~-----~r~~~~~~~~~~~-~~~~~~~~~~~~-~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~ 123 (420)
-.+.+|+.|++. ||+.++++.++.+ +.....+. .++ .....+..++.+++.+...++..++..|..+ +++.
T Consensus 77 K~l~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~-~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~ 154 (468)
T TIGR00788 77 KPFAGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPG-KVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPS 154 (468)
T ss_pred HHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhccc-ccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCC
Confidence 445899999996 6666777766653 33333332 344 3444458899999999999999999999998 5555
Q ss_pred hhhHHH---HhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhhhhhhhh
Q 014698 124 RAVSFV---FGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSA 200 (420)
Q Consensus 124 ~~~~~~---~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (420)
...+.. ....++|.++|+.+++.+.+.++||..|++.+...++..+...+++|+++....+..+++.. ..... ..
T Consensus 155 ~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~~~~~~~E~~~~~~~~~~~~~~~-~~~~~-~~ 232 (468)
T TIGR00788 155 AGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLFVSNLSKERRAFVRPRIGTYLEM-NMALL-TL 232 (468)
T ss_pred cCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHhcccccccccccccccchh-hhhhh-hh
Confidence 443333 34445899999999999999999999999988887776666677777642111110000000 00000 00
Q ss_pred hhhhhcccccccchhhhhhcHHHHHHHHHHHH-hHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhh
Q 014698 201 SLEEMGESLKDVPWKAIFRSKAVWAMIYAHFC-GSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQ 279 (420)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~ 279 (420)
...+. .+......++.+++|.++...+..++ +.... ......-.+.++..|+++.+.|......+++.+++..+.++
T Consensus 233 ~~~~~-~~~~~~~l~~~l~~~~i~~~l~fifl~~~~~~-~~~~~~f~~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~ 310 (468)
T TIGR00788 233 GVLAN-VKVQILGLRGAIQLLEIAKPLIFIFLSYANLP-GASGSVFCATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDR 310 (468)
T ss_pred hHHHH-HHHHHHHHHHHHhcHHHHHHHHHHHHHHhhcC-CCCceeEEEEcccCCCCcchhhhHHHHHHHHHHHHHHHHHH
Confidence 00000 00001123456778888876655555 22111 11111111333567999999999999999999999999998
Q ss_pred hhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHh-----hc----CCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccC
Q 014698 280 FADNLIATGVETTMVRKICQTIAFLSPAVCMTLSS-----ID----LGLPHWEIVGILTAGLALSSFALSGLYCTHQDIS 350 (420)
Q Consensus 280 l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 350 (420)
+.+|++. | ..+..+.+..+....... .. ...........++.+++.+....+....+.+..|
T Consensus 311 ~~~~~~~--------r-~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p 381 (468)
T TIGR00788 311 FLKTFPY--------R-LLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCP 381 (468)
T ss_pred HHhhCCH--------H-HHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCC
Confidence 8888874 3 333333333333221110 00 0112222333455666666667777777788899
Q ss_pred ccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCC----ceeeeehhhhH
Q 014698 351 PEYASILLGITNTVGAVPGIVGVALTGYLLDSTH----SWSMSLFAPSI 395 (420)
Q Consensus 351 ~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~----~~~~~~~~~~~ 395 (420)
++.+|+..++.+++.++|..+++.++|.+.+..| +++..+....+
T Consensus 382 ~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i 430 (468)
T TIGR00788 382 SGCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILG 430 (468)
T ss_pred CCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHH
Confidence 9999999999999999999999999999998764 25544444333
No 105
>PRK09669 putative symporter YagG; Provisional
Probab=99.83 E-value=1e-17 Score=156.49 Aligned_cols=323 Identities=12% Similarity=0.017 Sum_probs=198.4
Q ss_pred hhhhhccccccchhhhhHHhHH---hhhhcchhhh----cch-hHHHHHHHHHHHHHHHHHHHhhch------HHHHHHH
Q 014698 29 KKWVGLRIGRRGRIYLKDTNLL---ELLRLPLLFV----TWI-RKVLQTGVLIWSLATALLPLLAGF------MPGLVLS 94 (420)
Q Consensus 29 ~~~l~~~~g~~~~l~~~~~~~~---~l~~~p~~~~----~~~-r~~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~ 94 (420)
...++.+....+.+........ ..+.|.+.|| +|| |+.++.+....++...+... .++ ...+++.
T Consensus 37 t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~-~p~~~~~~~~~~~~~~ 115 (444)
T PRK09669 37 TDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFY-TPDFGATGKIIYACVT 115 (444)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHh-CCCCCcchHHHHHHHH
Confidence 4445555555555555544443 4455555787 444 56677777777777655432 332 3556666
Q ss_pred HHHHHhccccchhhhHHHHHhcC-CccccchhhHHHHhhhhhHHHHHHhhHHHhhh-------ccchhHHHHHHHHHHHH
Q 014698 95 RVLVGIGEGVSPSAATDLIARSI-PLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE-------NLGWESVFYIFGLLGIA 166 (420)
Q Consensus 95 r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~-------~~gwr~~f~~~~~~~~~ 166 (420)
..+.+.+.+.......++.+|+. +++||.+..++...+..+|..+++.+...+.. ..+|+..+.+.++++.+
T Consensus 116 ~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v 195 (444)
T PRK09669 116 YILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVV 195 (444)
T ss_pred HHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHH
Confidence 66667666667777789999998 56889999898888888888877765544332 34788888888877766
Q ss_pred HHHHh-hhcccCcccCCCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhh
Q 014698 167 WFSGF-KILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLP 245 (420)
Q Consensus 167 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (420)
..+.. +..+|++++++ + ++ .....++++++|||.++......++............+
T Consensus 196 ~~~~~~~~~~e~~~~~~-~--~~-------------------~~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~ 253 (444)
T PRK09669 196 LFFCCFFMTKERYTPEV-D--NS-------------------SSVWKDLKLLLGNSQWRIMFIFNVVLLTAVVTRGGATL 253 (444)
T ss_pred HHHHHhCCeEEecCCCC-c--CC-------------------CCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhhh
Confidence 54333 33344321110 0 00 00112256788999998887777766555554444444
Q ss_pred hHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHH
Q 014698 246 TYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIV 325 (420)
Q Consensus 246 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (420)
.|.+...+ +++..+.+.....+..+++.++.+++.||+|+| + ...............+.....++.....+
T Consensus 254 y~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~-------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (444)
T PRK09669 254 YYVNYVLL-RPDLATLFLVTGMIAGLFGALLSERLLGKFDRV-------R-AFKWTIVAFVILSALIFFIPPSNVWLIFA 324 (444)
T ss_pred eeeeeecC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH-------H-HHHHHHHHHHHHHHHHHHhCcchHHHHHH
Confidence 44444333 233344455555677788888999999999864 2 22222221222222222233333334455
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhccC-------ccchHHHHHHHHHhhhhhHHHHHHHHHHHhccC
Q 014698 326 GILTAGLALSSFALSGLYCTHQDIS-------PEYASILLGITNTVGAVPGIVGVALTGYLLDST 383 (420)
Q Consensus 326 ~~~~~g~~~~~~~~~~~~~~~~~~~-------~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 383 (420)
..++.+++.+...+.......+..+ .+..|...|..+....+|..+++.+.|.+.+..
T Consensus 325 ~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~ 389 (444)
T PRK09669 325 LNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWV 389 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 5566788777666666665554443 234577889999999999999999999999876
No 106
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.82 E-value=1.3e-17 Score=145.23 Aligned_cols=328 Identities=14% Similarity=0.077 Sum_probs=231.5
Q ss_pred hhhhcchhhhcc-hhHHHHHHHHHHHHHHHHHHHhhc--hHHHHHHHHHHHHhccccchhhhHHHHHhcCCccccchhhH
Q 014698 51 ELLRLPLLFVTW-IRKVLQTGVLIWSLATALLPLLAG--FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVS 127 (420)
Q Consensus 51 ~l~~~p~~~~~~-~r~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~ 127 (420)
+..-|-+.|..+ |||.+-....+-.+.+....+..+ +++..++.-.+..++.....+...+++.+..++++-++..+
T Consensus 75 apiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~~~riS~ 154 (438)
T COG2270 75 APILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDNMGRISG 154 (438)
T ss_pred HHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehhhHhhhhcCccccCcccc
Confidence 333334467777 555565555665666666655344 34556667788888989999999999999999999999988
Q ss_pred HHHhhhhhHHHHHHhhHH--Hhh----------------hccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccc
Q 014698 128 FVFGGLSFGSVAGLLLAP--PII----------------ENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRS 189 (420)
Q Consensus 128 ~~~~~~~~g~~~g~~l~~--~l~----------------~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (420)
.-.....+|..+.-...- ... +...-|..+.+.++..++..+..+...++++..+.. +
T Consensus 155 lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~~~v~~~~~~~~~----~ 230 (438)
T COG2270 155 LGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPMILNVHDAEKISSP----P 230 (438)
T ss_pred cccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHHHhccccccccccc----c
Confidence 888888888776555431 111 122467888888888777554444443333321100 0
Q ss_pred hhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHH
Q 014698 190 NYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLA 269 (420)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 269 (420)
. . ......+|. +.+++++.+++.+....+..+++.=+..........|..+.+|++..+...+.....+.
T Consensus 231 ~-~----~l~~g~k~L-----~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vv 300 (438)
T COG2270 231 P-T----ALRNGFKEL-----KSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVV 300 (438)
T ss_pred h-H----HHHHHHHHH-----HHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHH
Confidence 0 0 001111111 12256777788899999999999999999999999999988999999999999999999
Q ss_pred HHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhcc
Q 014698 270 SVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDI 349 (420)
Q Consensus 270 ~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 349 (420)
++++.++.|++.||++.| +... ....+....++...... ......+..++.|.+.|..+...-+...+.+
T Consensus 301 A~lg~ii~g~Ld~rfg~k-------~vl~-~~lvi~~~~~~~~~~~~--~~~~f~i~gll~g~s~G~~qA~SRSy~~~lv 370 (438)
T COG2270 301 AALGAIIAGFLDERFGSK-------PVLM-IGLVILSIAALYLIFLE--GELDFWILGLLVGTSLGGAQASSRSYLARLV 370 (438)
T ss_pred HHHHHHHHHHHHHHhCCc-------eeeh-HHHHHHHHHHHHHHHcc--ccHHHHHHHHHHHHhcchHHHHHHHHHHHhC
Confidence 999999999999999975 2222 22222233333332222 2444445557789999999999999999999
Q ss_pred CccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHH
Q 014698 350 SPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGT 402 (420)
Q Consensus 350 ~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~ 402 (420)
|+++.++.+|+++......+.+||.+.+.+.+.+|+.+..+....++..+...
T Consensus 371 p~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~ 423 (438)
T COG2270 371 PKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLL 423 (438)
T ss_pred CCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHh
Confidence 99999999999999999999999999999999998888777765554444433
No 107
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.81 E-value=1.9e-17 Score=147.36 Aligned_cols=359 Identities=12% Similarity=0.068 Sum_probs=221.5
Q ss_pred hhccccccchhhhhHHhH---HhhhhcchhhhcchhHHHHHHHHH--HHHHHHHH-H---HhhchHH-HHHHHHHHHHhc
Q 014698 32 VGLRIGRRGRIYLKDTNL---LELLRLPLLFVTWIRKVLQTGVLI--WSLATALL-P---LLAGFMP-GLVLSRVLVGIG 101 (420)
Q Consensus 32 l~~~~g~~~~l~~~~~~~---~~l~~~p~~~~~~~r~~~~~~~~~--~~~~~~~~-~---~~~~~~~-~l~~~r~l~G~~ 101 (420)
.+.+-++.|.+++..... .+.+.+.+.||.+.||-++..+.. ...+.... . .+..|.+ ..+++-...|+.
T Consensus 38 ~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n~~lg~iig~i~l~~~ 117 (412)
T PF01306_consen 38 AGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGLV 117 (412)
T ss_dssp H---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTTT
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455555666565554333 345556679999955544333222 22222221 1 1122321 223333334444
Q ss_pred cccchhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccC
Q 014698 102 EGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSN 181 (420)
Q Consensus 102 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~ 181 (420)
.....|..-+++.++. ++.+.-.|-.....++|.+++..++|.+.+. +-+..|++....+++..++....+++.+++
T Consensus 118 f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~i-~p~~~fwi~s~~~~il~lll~~~~~~~~~~ 194 (412)
T PF01306_consen 118 FNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFNI-NPNIIFWIASAAAIILLLLLLLLKPDVPPQ 194 (412)
T ss_dssp TTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHSS---SSSS
T ss_pred HcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeeee-CccHHHHHHHHHHHHHHHHHHHcCCcCchh
Confidence 4555566666665654 4556677888899999999999999999874 557788877666655544444443322221
Q ss_pred CCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhh---CCCcch
Q 014698 182 GATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEEL---SLNLTE 258 (420)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~ 258 (420)
.+.. |.+..+ +++.+.+...+++|+|++|.+.+........+..+....|.|..+.+ +.+...
T Consensus 195 ~~~~-~~~~~~-------------~~~~~~~~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~ 260 (412)
T PF01306_consen 195 AEVA-DALGAK-------------KDKVSLKDVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQM 260 (412)
T ss_dssp S-SS-TTSSS-------------------HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHH
T ss_pred hhhh-cccccC-------------CCCCcHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhH
Confidence 1111 110000 00111122468899999999988877777777777767777776533 344566
Q ss_pred hhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhh
Q 014698 259 AAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFA 338 (420)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 338 (420)
.|.+.+...+..++...+.+++.+|+|.| ..+..+..+..+=.......++ ++.....=.+-+.-.....
T Consensus 261 ~G~l~s~~v~~E~~~m~~~p~li~rig~k---------~~Lllag~i~~iRi~~~~~~~~-~~~i~~~klLH~~e~~l~l 330 (412)
T PF01306_consen 261 YGYLWSVQVFLEALMMFFSPWLINRIGAK---------NLLLLAGVIMAIRIIGSGFATN-PWVISLIKLLHALEFPLLL 330 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH-HH---------HHHHHHHHHHHHHHHHHHT--S-HHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHhcChH---------hHHHHHHHHHHHHHHHHhhhcc-hHHHHHHHHHHHHHHHHHH
Confidence 78888999999999999999999999963 3333444444554554444432 4444444477788777777
Q ss_pred hhhhhhhhhccCccchHHHHHHH-HHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhccCCCCCCCC
Q 014698 339 LSGLYCTHQDISPEYASILLGIT-NTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSKPQNFS 417 (420)
Q Consensus 339 ~~~~~~~~~~~~~~~~g~~~g~~-~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (420)
....-.+.+.+|++..++...+. +...+++..+.+.+.|.++|+. +++..|++.+.+.+...++..+..++.+++...
T Consensus 331 va~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~-G~~~tylimg~iv~~~~li~~f~l~~~~~~~~~ 409 (412)
T PF01306_consen 331 VAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRI-GFQHTYLIMGLIVLPFTLISAFTLKKDKKQIVH 409 (412)
T ss_dssp HHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHS--SSSTTCC
T ss_pred HHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhc-CcHHHHHHHHHHHHHHHHHheeeecCCCccccc
Confidence 77777788889999999999986 5778899999999999999998 777788888887777777777777766665544
Q ss_pred C
Q 014698 418 T 418 (420)
Q Consensus 418 ~ 418 (420)
+
T Consensus 410 ~ 410 (412)
T PF01306_consen 410 P 410 (412)
T ss_dssp C
T ss_pred C
Confidence 3
No 108
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.81 E-value=1.9e-16 Score=146.17 Aligned_cols=341 Identities=12% Similarity=0.060 Sum_probs=194.1
Q ss_pred hhccccccchhhhhHH---hHHhhhhcchhhhc-chhHHHHHHHHHHHHHHHHHHHhhc-hHHHHHHHHHHHHhccccch
Q 014698 32 VGLRIGRRGRIYLKDT---NLLELLRLPLLFVT-WIRKVLQTGVLIWSLATALLPLLAG-FMPGLVLSRVLVGIGEGVSP 106 (420)
Q Consensus 32 l~~~~g~~~~l~~~~~---~~~~l~~~p~~~~~-~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~r~l~G~~~~~~~ 106 (420)
++.+....+.+...+. .++.++++.+.||+ ||||++.++.++..++.++++. .+ +...+.+...+.++|.|...
T Consensus 40 lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~-~~~~~~~~~l~l~li~iG~G~~~ 118 (493)
T PRK15462 40 LKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGA-SEIHPSFLYLSLAIIVCGYGLFK 118 (493)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHH-hhcchhHHHHHHHHHHHhccccc
Confidence 3333333344444333 34577888889999 9999999999999998876653 32 22334444445556666777
Q ss_pred hhhHHHHHhcCCcc--ccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccC---
Q 014698 107 SAATDLIARSIPLE--ERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSN--- 181 (420)
Q Consensus 107 ~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~--- 181 (420)
+...++++|.+|++ +|..++++.+.+.++|..++|.+.+++.+.+|||+.|.+.++..++..+......+..++.
T Consensus 119 ~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~~~~~~~l~~~~~~ 198 (493)
T PRK15462 119 SNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTHTRGV 198 (493)
T ss_pred ccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHhhhhhccCCCC
Confidence 77789999999875 6999999999999999999999999999999999999987664444333332222111110
Q ss_pred CCCcCccchhh----------------hhhhhhhhhhhh-------------h--cccccccchhhhhhcH--HHHHHHH
Q 014698 182 GATLAPRSNYI----------------NMKKSLSASLEE-------------M--GESLKDVPWKAIFRSK--AVWAMIY 228 (420)
Q Consensus 182 ~~~~~~~~~~~----------------~~~~~~~~~~~~-------------~--~~~~~~~~~~~~~~~~--~~~~~~~ 228 (420)
++++.++++.. .......+.... . ....+ . .+.-|+| .+..+.+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~er~r~~~~~~l~~ 275 (493)
T PRK15462 199 NKKVLRATNFLLPNWGWLLVLLVATPALITVLFWKEWSVYALIVATIIGLGVLAKIYRKA-E--NQKQRKELGLIVTLTF 275 (493)
T ss_pred CCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-C--CHHHHhhHHHHHHHHH
Confidence 01111000000 000000000000 0 00000 0 0111122 1222333
Q ss_pred HHHHhHHHHHHHhhhhhhHhhhh-----hCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHH
Q 014698 229 AHFCGSWGHYTCLSWLPTYFSEE-----LSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAF 303 (420)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~ 303 (420)
...+.+..+....+.+..|.++. +|++ ...++..+...+..++.+++..++=.|..+|+..+....|... ++
T Consensus 276 ~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~-ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~--g~ 352 (493)
T PRK15462 276 FSMLFWAFAQQGGSSISLYIDRFVNRDMFGYT-VPTAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFAL--GL 352 (493)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHhccchhccee-eCHHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHH--HH
Confidence 33444444555555666666553 2322 2356677888887787787777776666443222222234332 22
Q ss_pred HHhHHHHHHH---hh--cC---CCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhh-hhhHHHHHH
Q 014698 304 LSPAVCMTLS---SI--DL---GLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVG-AVPGIVGVA 374 (420)
Q Consensus 304 ~~~~~~~~~~---~~--~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~-~~g~~~~~~ 374 (420)
+..+++++.. .. .. .+..|.+...++...+--...+...+.+.+..|++.+|+.+|...... .+|..++..
T Consensus 353 ~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~ 432 (493)
T PRK15462 353 GLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGV 432 (493)
T ss_pred HHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222222211 11 11 134555566677888888888888888888889999999999985533 455555555
Q ss_pred HHHHH
Q 014698 375 LTGYL 379 (420)
Q Consensus 375 ~~g~l 379 (420)
+.+..
T Consensus 433 ~~~~~ 437 (493)
T PRK15462 433 IADQT 437 (493)
T ss_pred HHHHh
Confidence 54444
No 109
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.80 E-value=2.9e-17 Score=152.73 Aligned_cols=323 Identities=18% Similarity=0.192 Sum_probs=224.4
Q ss_pred hhhhccccccchhhhhHHhHHhh---hhcchhh----hcc-hhHHHHHHHHHHHHHHHHHHHhh-c-------hHHHHHH
Q 014698 30 KWVGLRIGRRGRIYLKDTNLLEL---LRLPLLF----VTW-IRKVLQTGVLIWSLATALLPLLA-G-------FMPGLVL 93 (420)
Q Consensus 30 ~~l~~~~g~~~~l~~~~~~~~~l---~~~p~~~----~~~-~r~~~~~~~~~~~~~~~~~~~~~-~-------~~~~l~~ 93 (420)
..++.+....+.+........++ +.|.+.| |+| ||+.++.+....+++..++.. . + ....+.+
T Consensus 30 ~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~-~~p~~~~~~~~~~~~~~ 108 (428)
T PF13347_consen 30 DVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFS-PPPAGLSFTAKLVWLFV 108 (428)
T ss_pred HHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhc-cccchhhhhhHHHHHHH
Confidence 33444445455555544444433 4445578 566 556677788888887777643 3 3 2234567
Q ss_pred HHHHHHhccccchhhhHHHHHhcCC-ccccchhhHHHHhhhhhHHHHHHhhHHHhhhcc-------chhHHHHHHHHHHH
Q 014698 94 SRVLVGIGEGVSPSAATDLIARSIP-LEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL-------GWESVFYIFGLLGI 165 (420)
Q Consensus 94 ~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-------gwr~~f~~~~~~~~ 165 (420)
.-++..++.........++..|..+ ++||.+..+.-..+..+|..+...+.+.+.+.. +|++...+.+++.+
T Consensus 109 ~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~ 188 (428)
T PF13347_consen 109 FYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGL 188 (428)
T ss_pred HHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHH
Confidence 7777788888888899999999997 578999999999999998876666666555322 69999998888887
Q ss_pred HHH-HHhhhcccCcccCCCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhh
Q 014698 166 AWF-SGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWL 244 (420)
Q Consensus 166 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (420)
+.. +..+..+|++++.++++ ++..-...+++++|||+++...+..++............
T Consensus 189 v~~~i~~~~~ke~~~~~~~~~--------------------~~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~ 248 (428)
T PF13347_consen 189 VFFLITFFFVKERSVEVTEQE--------------------KKISLRDSLRSLFRNRPFRILLLAFFLQWLAFALMNTFL 248 (428)
T ss_pred HHhhhhhheeeeccccccccc--------------------cccccccchhhhcccchHHHHHHHHHHHHhhhhhhhhHH
Confidence 754 44455566111111110 011112336788999999999999999888888888888
Q ss_pred hhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHH-HhhcCCCcHHH
Q 014698 245 PTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTL-SSIDLGLPHWE 323 (420)
Q Consensus 245 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 323 (420)
+.|.++..|.+ ...+.+.....++.+++.++.++++||+|+| + ....+....+..... .....++....
T Consensus 249 ~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~-------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (428)
T PF13347_consen 249 PYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKK-------K--VYIIGLLLAALGFLLLFFLGPGSPWLV 318 (428)
T ss_pred HHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccce-------e--ehhhhHHHHHHHHHHHHHHHhhhHHHH
Confidence 88888887776 5667777788899999999999999999975 2 222333333333332 23322446666
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhccC-------ccchHHHHHHHHHhhhhhHHHHHHHHHHHhccC
Q 014698 324 IVGILTAGLALSSFALSGLYCTHQDIS-------PEYASILLGITNTVGAVPGIVGVALTGYLLDST 383 (420)
Q Consensus 324 ~~~~~~~g~~~~~~~~~~~~~~~~~~~-------~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 383 (420)
.+...+.|++.+...........+..+ +++.|...|+.+....++..+++.+.+.+.+..
T Consensus 319 ~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~ 385 (428)
T PF13347_consen 319 LILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALV 385 (428)
T ss_pred HHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHh
Confidence 667788888888777666666655443 345799999999999999999999999998765
No 110
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.78 E-value=1.9e-15 Score=132.13 Aligned_cols=268 Identities=20% Similarity=0.212 Sum_probs=192.5
Q ss_pred HHHHHHHHHhccccchhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHH---HHHHHHH
Q 014698 91 LVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIF---GLLGIAW 167 (420)
Q Consensus 91 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~---~~~~~~~ 167 (420)
....-.+.|+|.+.......++++|..|+|+|+++.++.....-+|.+++..+.+.+.+.++-.-..-+. ++..++.
T Consensus 92 a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a~i~~~l 171 (403)
T PF03209_consen 92 AALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGVALIALLL 171 (403)
T ss_pred HHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHH
Confidence 4455677899999999999999999999999999999999999999999999999998877643333222 2222222
Q ss_pred HHHhhhcccCcccCCCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhH
Q 014698 168 FSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTY 247 (420)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (420)
.++..+=.|++..+..+..++++ ..-...++++..+|+...+....++...+++.-...+-+|
T Consensus 172 ~~ia~wg~E~r~~~~~~~~~~~~-----------------~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~~QD~iLEPy 234 (403)
T PF03209_consen 172 NLIALWGQEPRRSRRAAAAERPR-----------------PPFREAWRQVWASPQARRFFVFLFLGTLAFFMQDVILEPY 234 (403)
T ss_pred HHHHHHhcccCCcccccCCCCCC-----------------ccHHHHHHHHHhCCChhHHHHHHHHHHHHHHhhHHHcCCc
Confidence 22222223332222221111110 0011225677788888888888888888888888899999
Q ss_pred hhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhh-hhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHH
Q 014698 248 FSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADN-LIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVG 326 (420)
Q Consensus 248 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (420)
--+.+|+++.+...+....+.+..++....+++..| .+++ |...............+...-..++.+.....
T Consensus 235 gg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~-------~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~ 307 (403)
T PF03209_consen 235 GGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKK-------RTAALGCLLGALAFALIILAGPLGSPWLFRPG 307 (403)
T ss_pred hhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCch-------HHHHHHHHHHHHHHHHHHHHHhcccchHHHHH
Confidence 999999999999999999999999999998888774 3322 22221111122222222233334456677778
Q ss_pred HHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhcc
Q 014698 327 ILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDS 382 (420)
Q Consensus 327 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 382 (420)
.+++|++.|.+.........+...+++.|..+|.-...+.++..++..++|.+.|.
T Consensus 308 ~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~ 363 (403)
T PF03209_consen 308 VFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDL 363 (403)
T ss_pred HHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999988888888888888899999999999999999999999999999884
No 111
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.78 E-value=3.3e-16 Score=147.31 Aligned_cols=326 Identities=13% Similarity=0.074 Sum_probs=199.1
Q ss_pred hhhhccccccchhhhhHHhHH---hhhhcchhhh----cch-hHHHHHHHHHHHHHHHHHHHhhch------HHHHHHHH
Q 014698 30 KWVGLRIGRRGRIYLKDTNLL---ELLRLPLLFV----TWI-RKVLQTGVLIWSLATALLPLLAGF------MPGLVLSR 95 (420)
Q Consensus 30 ~~l~~~~g~~~~l~~~~~~~~---~l~~~p~~~~----~~~-r~~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~r 95 (420)
..++.+....+.+........ ..+.|.+.|| +|| |+.++.+....+++..++ +..++ +..+++.-
T Consensus 35 ~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~ll-f~~p~~~~~~~~~~~~~~~ 113 (473)
T PRK10429 35 DVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLL-FSAHLFEGTAQYVFVCVTY 113 (473)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHH-HcCCCCCccHHHHHHHHHH
Confidence 344445454454544443332 4445666884 465 677777888877776555 22321 33455666
Q ss_pred HHHHhccccchhhhHHHHHhcC-CccccchhhHHHHhhhhhHHHHHHhhHHHhhh-------ccchhHHHHHHHHHHHHH
Q 014698 96 VLVGIGEGVSPSAATDLIARSI-PLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE-------NLGWESVFYIFGLLGIAW 167 (420)
Q Consensus 96 ~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~-------~~gwr~~f~~~~~~~~~~ 167 (420)
.+.+++.....+...++..|.. +++||.+..++.....++|..+.+.+...+.+ ..+|+....+.++..++.
T Consensus 114 ~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~ 193 (473)
T PRK10429 114 ILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVS 193 (473)
T ss_pred HHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHH
Confidence 6777887888888889999998 58999999998777777776666555443322 225777777766666554
Q ss_pred H-HHhhhcccCcccCCCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhh
Q 014698 168 F-SGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPT 246 (420)
Q Consensus 168 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (420)
. +..+..+|+++.++.+..+++ +...+..++.+++||.++......++..........+.+.
T Consensus 194 ~~~~~~~~~e~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y 256 (473)
T PRK10429 194 TIITLRNVHEVYSSDNQVSAEGS-----------------HLTLKDIVALIYKNDQLSCLLGMALAYNIASNIINGFAIY 256 (473)
T ss_pred HHHHHcCceecCCcccccccccc-----------------CCCHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhheee
Confidence 3 333335554321111100000 0001112445678999988888888877777776677776
Q ss_pred HhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHH-HHHHHh---hcCCCcHH
Q 014698 247 YFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAV-CMTLSS---IDLGLPHW 322 (420)
Q Consensus 247 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~ 322 (420)
|.+...+ +....+.+.....++.+++.++.+++.||+|+| +... .+.....+ ...... ...++...
T Consensus 257 ~~~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk-------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (473)
T PRK10429 257 YFTYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKSLSRR-------ILWA--GASIFPVLSCGVLLLMGLAAPHNALL 326 (473)
T ss_pred EEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH-------HHHH--HHHHHHHHHHHHHHHHhccCchhHHH
Confidence 6665433 455666676777788899999999999999964 2222 22222121 111111 12222333
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhccC-------ccchHHHHHHHHHhhhhhHHHHHHHHHHHhccC
Q 014698 323 EIVGILTAGLALSSFALSGLYCTHQDIS-------PEYASILLGITNTVGAVPGIVGVALTGYLLDST 383 (420)
Q Consensus 323 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~-------~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 383 (420)
..+..++.+++.+...........+..+ .+..|...|..+....++..+++.+.|.+.+..
T Consensus 327 ~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~ 394 (473)
T PRK10429 327 IVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLI 394 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3444455666666555555555554433 344677999999999999999999999999865
No 112
>PRK09848 glucuronide transporter; Provisional
Probab=99.77 E-value=2.6e-16 Score=147.31 Aligned_cols=323 Identities=10% Similarity=0.038 Sum_probs=188.4
Q ss_pred hhhhhccccccchhhhhHHhH---Hhhhhcchhhhc----chhH-HHHHHHHHHHHHHHHHHHhh----c--hHHHHHHH
Q 014698 29 KKWVGLRIGRRGRIYLKDTNL---LELLRLPLLFVT----WIRK-VLQTGVLIWSLATALLPLLA----G--FMPGLVLS 94 (420)
Q Consensus 29 ~~~l~~~~g~~~~l~~~~~~~---~~l~~~p~~~~~----~~r~-~~~~~~~~~~~~~~~~~~~~----~--~~~~l~~~ 94 (420)
...++.+....+.+....... ...+.|.+.||. |||| .+..+.+...+.+.+..... + .....+..
T Consensus 36 ~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (448)
T PRK09848 36 TDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVYAYLT 115 (448)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHHHHHHH
Confidence 333444444444444443333 355666668886 5555 55666655554444431111 1 12234445
Q ss_pred HHHHHhccccchhhhHHHHHhcCC-ccccchhhHHHHhhhh-----hHHHHHHhhHHHhhhcc--chhHHHHHHHHHHHH
Q 014698 95 RVLVGIGEGVSPSAATDLIARSIP-LEERSRAVSFVFGGLS-----FGSVAGLLLAPPIIENL--GWESVFYIFGLLGIA 166 (420)
Q Consensus 95 r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~-----~g~~~g~~l~~~l~~~~--gwr~~f~~~~~~~~~ 166 (420)
-.+.+++.+...+...++..|..+ ++||.+..+.-..+.+ ++..++|.+++...+.. +|.....+.++.+++
T Consensus 116 ~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~v~~~~ 195 (448)
T PRK09848 116 YMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTIVLAIAGMV 195 (448)
T ss_pred HHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHH
Confidence 567787777788777777777764 4678888776654433 45555666655432111 121111222333332
Q ss_pred HH-HHhhhcccCcccCCCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhh
Q 014698 167 WF-SGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLP 245 (420)
Q Consensus 167 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (420)
.. +.....+|++++++++ ...+..+++++|||.++...+..++............|
T Consensus 196 ~~~~~~~~~~e~~~~~~~~-----------------------~~~~~~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~ 252 (448)
T PRK09848 196 LYFICFKSTRENVVRIVAQ-----------------------PSLKISLQTLKRNRPLFMLCIGALCVLISTFAVSASSL 252 (448)
T ss_pred HHHHHHcCcEeccCCCccC-----------------------CCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhhe
Confidence 22 2223334432211100 00111256788999999988888888888888888888
Q ss_pred hHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCC-CcHHHH
Q 014698 246 TYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLG-LPHWEI 324 (420)
Q Consensus 246 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 324 (420)
.|+++.+|.++...++......++.+++.++.+++.||+++| +.. ..+..+..+........+. +.+...
T Consensus 253 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~--------~~~-~~g~~~~~i~~~~~~~~~~~~~~~~~ 323 (448)
T PRK09848 253 FYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKK--------NTF-LIGALLGTCGYLLFFWVSVWSLPVAL 323 (448)
T ss_pred eeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH--------HHH-HHHHHHHHHHHHHHHHcCchhHHHHH
Confidence 899988888776665555555667788899999999999863 222 2233333332222223222 223333
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhccCc-------cchHHHHHHHHHhhhhhHHHHHHHHHHHhccC
Q 014698 325 VGILTAGLALSSFALSGLYCTHQDISP-------EYASILLGITNTVGAVPGIVGVALTGYLLDST 383 (420)
Q Consensus 325 ~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 383 (420)
...++.+++.+...+.......+..|. ++.|...|+.+....+|..+++.+.|.+.+..
T Consensus 324 ~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~ 389 (448)
T PRK09848 324 VALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLS 389 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 445566777776665555555554443 34699999999999999999999999998765
No 113
>PRK11462 putative transporter; Provisional
Probab=99.76 E-value=1.4e-15 Score=142.00 Aligned_cols=321 Identities=14% Similarity=0.048 Sum_probs=187.3
Q ss_pred hhhhccccccchhhhhHHhHH---hhhhcchhhhc----c-hhHHHHHHHHHHHHHHHHHHHhhch------HHHHHHHH
Q 014698 30 KWVGLRIGRRGRIYLKDTNLL---ELLRLPLLFVT----W-IRKVLQTGVLIWSLATALLPLLAGF------MPGLVLSR 95 (420)
Q Consensus 30 ~~l~~~~g~~~~l~~~~~~~~---~l~~~p~~~~~----~-~r~~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~r 95 (420)
..++.+....+.+.......- -.+.|.+.||. | ||+.++++....+++..++-. .++ ...+.+.-
T Consensus 38 ~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~-~p~~s~~~~~~y~~~~~ 116 (460)
T PRK11462 38 DIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYS-TPDLSMNGKMIYAAITY 116 (460)
T ss_pred HhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHh-CCCCCcchHHHHHHHHH
Confidence 334444444444444444333 33345556653 4 556777787777777766532 332 33455666
Q ss_pred HHHHhccccchhhhHHHHHhcCC-ccccchhhHHHHhhhhhHHHHHHhhHHHhhhc-------cchhHHHHHHHHHHHHH
Q 014698 96 VLVGIGEGVSPSAATDLIARSIP-LEERSRAVSFVFGGLSFGSVAGLLLAPPIIEN-------LGWESVFYIFGLLGIAW 167 (420)
Q Consensus 96 ~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~-------~gwr~~f~~~~~~~~~~ 167 (420)
.+..++.........++.+|..+ +|||++..++...+.++|..+++.+...+.+. .+|+....+.+++.++.
T Consensus 117 ~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~ 196 (460)
T PRK11462 117 TLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMM 196 (460)
T ss_pred HHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHH
Confidence 66778878888888899999986 68999999999999999988887776555443 25777777777766655
Q ss_pred HHHhhh-cccCcccCCCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhh
Q 014698 168 FSGFKI-LQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPT 246 (420)
Q Consensus 168 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (420)
....+. .+|.++. +++ +. + .+..++..++||.++......++..............
T Consensus 197 ~~i~~~~~kE~~~~-~~~---~~-------~------------~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y 253 (460)
T PRK11462 197 LAFCFFTTKERVEA-PPT---TT-------S------------MREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMY 253 (460)
T ss_pred HHHHHhcceeccCC-Ccc---CC-------C------------HHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhh
Confidence 433333 3332211 110 00 0 0112457788888887766665555554444444444
Q ss_pred HhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHH
Q 014698 247 YFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVG 326 (420)
Q Consensus 247 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (420)
|.+...|. +...+.+.....++.+++.++++++.||+++| + .....................++.....+.
T Consensus 254 ~~~y~~g~-~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk-------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (460)
T PRK11462 254 YVTWILGT-PEVFVAFLTTYCVGNLIGSALAKPLTDWKCKV-------T-IFWWTNALLAVISLAMFFVPMQASITMFVF 324 (460)
T ss_pred hhhhhcCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH-------H-HHHHHHHHHHHHHHHHHHhchhHHHHHHHH
Confidence 44444443 33445566777888899999999999999864 2 222122222222222222222222223333
Q ss_pred HHHHHHHhhhhhhhhhhhhhhccC-------ccchHHHHHHHHHhhhhhHHHHHHHHHHHhccC
Q 014698 327 ILTAGLALSSFALSGLYCTHQDIS-------PEYASILLGITNTVGAVPGIVGVALTGYLLDST 383 (420)
Q Consensus 327 ~~~~g~~~~~~~~~~~~~~~~~~~-------~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 383 (420)
.++.|++.+...........+..+ .+..|...+.......+|.++++.+.|.+.+..
T Consensus 325 ~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~ 388 (460)
T PRK11462 325 IFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYG 388 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 344555554333322333332222 233455567777889999999999999998764
No 114
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.76 E-value=1.2e-16 Score=139.80 Aligned_cols=341 Identities=12% Similarity=0.090 Sum_probs=230.9
Q ss_pred HHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhh-----chHH--HHHHHHHHHHhccccchhhhHHHHHhcCCccc
Q 014698 49 LLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLA-----GFMP--GLVLSRVLVGIGEGVSPSAATDLIARSIPLEE 121 (420)
Q Consensus 49 ~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~-----~~~~--~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~ 121 (420)
...+.+..++|++|-|...+++..+..++..+-...+ +.++ ....+..+.+.++-........+.+-|+|++|
T Consensus 94 p~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~q 173 (480)
T KOG2563|consen 94 PFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQ 173 (480)
T ss_pred HHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcch
Confidence 3355555569999999999999999999998865411 3344 67789999999988888887899999999999
Q ss_pred cchhhHHHHhhhhhHHHHHHhhHHHhhhcc------chhH--HHHHHHHHHHHHHHHh-hhcccCcccCCCCcCccchhh
Q 014698 122 RSRAVSFVFGGLSFGSVAGLLLAPPIIENL------GWES--VFYIFGLLGIAWFSGF-KILQEGETSNGATLAPRSNYI 192 (420)
Q Consensus 122 r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~------gwr~--~f~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 192 (420)
|..+..+-..+..+|.++|.++...+..+- .|.. .|+..+.++.+.+++. +..++.|+.+.....+.+.
T Consensus 174 ra~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~~~-- 251 (480)
T KOG2563|consen 174 RAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAALQ-- 251 (480)
T ss_pred hhhhhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhhhh--
Confidence 999999999999999999999888777543 3544 3444444444333332 2333333222221111100
Q ss_pred hhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHH
Q 014698 193 NMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVL 272 (420)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 272 (420)
+..-..+.++.++|+++....+.+......+++..+.+-.-+... |++...+|.......+++++
T Consensus 252 --------------~~~f~~si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~s-gY~~~~aG~ig~l~iv~Gml 316 (480)
T KOG2563|consen 252 --------------DASFPKSIKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCPS-GYEGVFAGYIGALMIVAGML 316 (480)
T ss_pred --------------cCcHHHHHHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhccccc-cCCccccchhHHHHHHHHHH
Confidence 011123367899999999998888887777877777666555543 78888899999999999999
Q ss_pred HHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHH--HhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccC
Q 014698 273 VTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTL--SSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDIS 350 (420)
Q Consensus 273 ~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 350 (420)
++.+.|.+.||.++. ++.............+.+ .........+.......+|.+.....+...-...|...
T Consensus 317 ga~~~gii~Dktk~f-------k~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~Ty 389 (480)
T KOG2563|consen 317 GALASGIIADKTKKF-------KLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTY 389 (480)
T ss_pred HHHHHHhhhhhhhhH-------HHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCCCCcceeeeeeecc
Confidence 999999999998753 333333222222221222 22233334555556667777777777777666777777
Q ss_pred ccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCc---eeeeehhhhHHHHHHHHHHhhhccCCCC
Q 014698 351 PEYASILLGITNTVGAVPGIVGVALTGYLLDSTHS---WSMSLFAPSIFFYLTGTIVWLAFASSKP 413 (420)
Q Consensus 351 ~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (420)
|..-++..|+.+..+++-+.+-..+.+...+..+. +...-+.....+.+..++..++++..++
T Consensus 390 Pv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y~R 455 (480)
T KOG2563|consen 390 PVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPDYRR 455 (480)
T ss_pred ccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhhHHh
Confidence 77778899999999999999999999988877641 3323344444455555555555544333
No 115
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.69 E-value=5.7e-14 Score=126.55 Aligned_cols=294 Identities=14% Similarity=0.116 Sum_probs=204.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhch------HHHHHHHHHHHHhccccchhhhHHHHHhcCC-ccccchhhHHHHhhhhh
Q 014698 63 IRKVLQTGVLIWSLATALLPLLAGF------MPGLVLSRVLVGIGEGVSPSAATDLIARSIP-LEERSRAVSFVFGGLSF 135 (420)
Q Consensus 63 ~r~~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~ 135 (420)
+|+.++.+.+-+++.+.++-. +++ ....++.-.+.+++.........++.+|..+ ++||.+..+.-+.+.++
T Consensus 82 fRP~lL~g~ip~~i~~~l~F~-~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~ 160 (467)
T COG2211 82 FRPWLLWGAIPFAIVAVLLFI-TPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASL 160 (467)
T ss_pred ccHHHHHHhHHHHHHHHHHHc-CCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHH
Confidence 677888888888888887743 553 4456677788889988888888899999985 68999999999999999
Q ss_pred HHHHHHhhHHHhhh-------ccchhHHHHHHHHHHHHHHHHhh-hcccCcccCCCCcCccchhhhhhhhhhhhhhhhcc
Q 014698 136 GSVAGLLLAPPIIE-------NLGWESVFYIFGLLGIAWFSGFK-ILQEGETSNGATLAPRSNYINMKKSLSASLEEMGE 207 (420)
Q Consensus 136 g~~~g~~l~~~l~~-------~~gwr~~f~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (420)
|..+...+...+.. ..||+..-.+.++++++..+..+ ..+|...+....+.+. +
T Consensus 161 g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~~~------------------~ 222 (467)
T COG2211 161 GGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTKTGV------------------K 222 (467)
T ss_pred HHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCcccc------------------c
Confidence 97766655554443 34788888888888777654444 4444433211111000 0
Q ss_pred cccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhc
Q 014698 208 SLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIAT 287 (420)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~ 287 (420)
...+..+..++|||++...++...+...+..........|.+...|.+.............+.+++.++..++.+|+|+|
T Consensus 223 ~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk 302 (467)
T COG2211 223 LKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKK 302 (467)
T ss_pred ccHHHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchH
Confidence 01111234678899999999888888888888888888888888888888888888888888888899999999999953
Q ss_pred CcchHHHHHHHHHHHHHHhHHHHHHHhhcC-CCcHHHHHHHHHHHHHhhhhhhhhhhhhhhcc-------CccchHHHHH
Q 014698 288 GVETTMVRKICQTIAFLSPAVCMTLSSIDL-GLPHWEIVGILTAGLALSSFALSGLYCTHQDI-------SPEYASILLG 359 (420)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-------~~~~~g~~~g 359 (420)
.....+.++..+......+.+ ++....++...+.+.+.+...+.....+.+.. ..+..|...|
T Consensus 303 ---------~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s 373 (467)
T COG2211 303 ---------KLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYS 373 (467)
T ss_pred ---------HHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHH
Confidence 333344444444433333333 33334444446666776655555555444332 2344788999
Q ss_pred HHHHhhhhhHHHHHHHHHHHhccCC
Q 014698 360 ITNTVGAVPGIVGVALTGYLLDSTH 384 (420)
Q Consensus 360 ~~~~~~~~g~~~~~~~~g~l~~~~~ 384 (420)
....+.-+|.+++..+.|++.+..|
T Consensus 374 ~~tF~~K~g~ala~~~~g~~L~~~G 398 (467)
T COG2211 374 GMTFFRKLGLALAGFIPGWILGAIG 398 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999998763
No 116
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.69 E-value=4.2e-14 Score=126.31 Aligned_cols=356 Identities=14% Similarity=0.163 Sum_probs=218.6
Q ss_pred Hhhhhcchhhhcc-hhHHHHHHHHHHHHHHHHHHHhh--chHHHHHHHHHHHHhccccchhhhHHHHHhcCCcc--ccch
Q 014698 50 LELLRLPLLFVTW-IRKVLQTGVLIWSLATALLPLLA--GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLE--ERSR 124 (420)
Q Consensus 50 ~~l~~~p~~~~~~-~r~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~--~r~~ 124 (420)
..++++.+.||.- +||++.++.++..++.++.+. + .+...+.++-.+.++|.|..-+...++++|.+|++ +|-.
T Consensus 77 t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~-~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~ 155 (498)
T COG3104 77 TPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAI-SSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDG 155 (498)
T ss_pred HHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhc-cccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCC
Confidence 3788888899987 899999999999999999876 5 46778999999999999999999999999999864 4788
Q ss_pred hhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhh-----------
Q 014698 125 AVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYIN----------- 193 (420)
Q Consensus 125 ~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 193 (420)
.+++++++.++|+.++|.+.+++.+++||...|...++-....++..+..++........+++......
T Consensus 156 gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (498)
T COG3104 156 GFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLPVLGGLVV 235 (498)
T ss_pred CccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhhhhhhhHHHHHH
Confidence 899999999999999999999999999999999998877666555555554332221111111100000
Q ss_pred -----------hhhhhhhhhh------hhcccccccchhhhhhc-HHHH---HHHHHHHHhHHHHHHHhhhhhhHhhhh-
Q 014698 194 -----------MKKSLSASLE------EMGESLKDVPWKAIFRS-KAVW---AMIYAHFCGSWGHYTCLSWLPTYFSEE- 251 (420)
Q Consensus 194 -----------~~~~~~~~~~------~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~- 251 (420)
..+.+..... +..--.+..+..+...+ ++.+ .+.+....++..+....+.+..|..+.
T Consensus 236 ~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~er~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v 315 (498)
T COG3104 236 MILAALLTLLLNQNTFSGVLLVISILIAIIYFAEAFRSPKVFDERRRLLAAIPLFLFAVIFWALYEQMGSSLNLYADRNV 315 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhh
Confidence 0000000000 00000000000111111 2222 222233333333333334444554442
Q ss_pred ----hCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHh---hc----CCCc
Q 014698 252 ----LSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSS---ID----LGLP 320 (420)
Q Consensus 252 ----~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----~~~~ 320 (420)
+|++ ....+..+...+..++.+++..++-.|.++++..+....|..+...........+... .. ..+.
T Consensus 316 ~~~~~g~~-vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~ 394 (498)
T COG3104 316 NRQIFGFE-VPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSV 394 (498)
T ss_pred ccccccee-cCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCH
Confidence 2222 3456777888888888888888888887766544433344433333322222222222 11 1234
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHH------HhccCCceeeeehhhh
Q 014698 321 HWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGY------LLDSTHSWSMSLFAPS 394 (420)
Q Consensus 321 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~------l~~~~~~~~~~~~~~~ 394 (420)
.+.+...++.+++--...+.....+.+..|+...+.+++........+..++..+.+. ..+.. .....|...+
T Consensus 395 ~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~-~~~~~F~~~g 473 (498)
T COG3104 395 WWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAF-IEGRVFGTIG 473 (498)
T ss_pred HHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhh-hhhhhHHHHH
Confidence 5556666788888888888888888888999888888888776666666666665552 22221 3444666666
Q ss_pred HHHHHHHHHHhhhc
Q 014698 395 IFFYLTGTIVWLAF 408 (420)
Q Consensus 395 ~~~~~~~~~~~~~~ 408 (420)
....+.....+...
T Consensus 474 ~v~i~~~~~~~~~~ 487 (498)
T COG3104 474 VVAIVIGILLLLLS 487 (498)
T ss_pred HHHHHHHHHHHHhh
Confidence 55555555444433
No 117
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.67 E-value=2.5e-15 Score=141.04 Aligned_cols=232 Identities=13% Similarity=0.133 Sum_probs=174.7
Q ss_pred chhhhcchhHHHHHHHHHHHHHHHHHHHh------------h-------c---------------------------h--
Q 014698 56 PLLFVTWIRKVLQTGVLIWSLATALLPLL------------A-------G---------------------------F-- 87 (420)
Q Consensus 56 p~~~~~~~r~~~~~~~~~~~~~~~~~~~~------------~-------~---------------------------~-- 87 (420)
..+.|..|.|++-+|.++.+++++++++- . + .
T Consensus 154 YfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (735)
T KOG3626|consen 154 YFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKEST 233 (735)
T ss_pred HhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCC
Confidence 33556668889999999999999887641 0 0 0
Q ss_pred --HH-HHHHHHHHHHhccccchhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhcc-------------
Q 014698 88 --MP-GLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL------------- 151 (420)
Q Consensus 88 --~~-~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~------------- 151 (420)
++ .++.+.++.|+|....++...+|+-|...+++-+..+|+......+|.++|.++++++...+
T Consensus 234 ~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~ 313 (735)
T KOG3626|consen 234 SYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPT 313 (735)
T ss_pred chhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCC
Confidence 22 57789999999999999999999999999999999999999999999999999999887522
Q ss_pred ------chhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhhhhhh-hhhhhhhcc--cccccchhhhhhcHH
Q 014698 152 ------GWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSL-SASLEEMGE--SLKDVPWKAIFRSKA 222 (420)
Q Consensus 152 ------gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~ 222 (420)
-|..-|++.+.+.++..+..+++|++.++..++....+....+++.. .....+..+ ++-....+++++||.
T Consensus 314 DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~i 393 (735)
T KOG3626|consen 314 DPRWIGAWWLGFLICGALLLFSAVPLFFFPKELPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPI 393 (735)
T ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHHhCcccCccccccchhhhhcccccccccccCCcchhhhHHHHHHHHHHHhcCch
Confidence 27777888888888888899999988776543211111000000000 000000000 011233678899999
Q ss_pred HHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHH-HHHHHHHhhhhhhhhhhhc
Q 014698 223 VWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPL-ASVLVTSIAAQFADNLIAT 287 (420)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~~~~ 287 (420)
+....+...+....+.++.+++|.|+++++|.++..+..+.....+ +..+|.+++|++.+|+..+
T Consensus 394 f~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~ 459 (735)
T KOG3626|consen 394 FMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLS 459 (735)
T ss_pred HHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeeccc
Confidence 9999999999999999999999999999999999999998866666 4557778999999998754
No 118
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.64 E-value=1.8e-17 Score=155.32 Aligned_cols=323 Identities=15% Similarity=0.188 Sum_probs=3.0
Q ss_pred hhhcchhHHHHHHHHHHHHHHHHHHHh-------------------------h------------------------chH
Q 014698 58 LFVTWIRKVLQTGVLIWSLATALLPLL-------------------------A------------------------GFM 88 (420)
Q Consensus 58 ~~~~~~r~~~~~~~~~~~~~~~~~~~~-------------------------~------------------------~~~ 88 (420)
+.+..|.|++-.|.++.++++++++.- . .-+
T Consensus 62 g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (539)
T PF03137_consen 62 GGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYF 141 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHH
Confidence 566567788888888888888876530 0 013
Q ss_pred HHHHHHHHHHHhccccchhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhcc-----------------
Q 014698 89 PGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL----------------- 151 (420)
Q Consensus 89 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~----------------- 151 (420)
..++++.++.|+|.+..++...+|+-|.+++++-+..+|+..+...+|.++|.++++.+.+.+
T Consensus 142 ~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~d 221 (539)
T PF03137_consen 142 YVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSD 221 (539)
T ss_dssp ----------SSS-------------------------------------------------------------------
T ss_pred HHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCC
Confidence 568889999999999999999999999999999999999999999999999999998776421
Q ss_pred -----chhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhhh-hhhhhhhhh--------hcccccccchhhh
Q 014698 152 -----GWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMK-KSLSASLEE--------MGESLKDVPWKAI 217 (420)
Q Consensus 152 -----gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--------~~~~~~~~~~~~~ 217 (420)
.|..-|.+.+...++..+..+.+|++-|..++.+.+++....++ +...+..++ ..-+.-....+++
T Consensus 222 p~WvGAWWLGfli~g~~~~l~aipl~~FPk~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~L 301 (539)
T PF03137_consen 222 PRWVGAWWLGFLICGILLFLSAIPLFFFPKKLPGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRL 301 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCcccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHH
Confidence 26667777888877777888888887665521111111100000 000000000 0111222346789
Q ss_pred hhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHH-HHHHHHHhhhhhhhhhhhcCcchHHHHH
Q 014698 218 FRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPL-ASVLVTSIAAQFADNLIATGVETTMVRK 296 (420)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~~~~~~~~~~~~~ 296 (420)
++||.+....+..........++.++.|.|++.+++.++.+++++.....+ +.++|.+++|.+.+|++-+... .-+
T Consensus 302 l~Np~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~---~~~ 378 (539)
T PF03137_consen 302 LTNPVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARG---AAK 378 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHH---HHH
Confidence 999999999999999999999999999999999999999999988866665 6668888999999999754211 011
Q ss_pred HHHHHHHHHhHHHHHHHhh------------cC---------------------------------CC---cHH-HHHHH
Q 014698 297 ICQTIAFLSPAVCMTLSSI------------DL---------------------------------GL---PHW-EIVGI 327 (420)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~------------~~---------------------------------~~---~~~-~~~~~ 327 (420)
.......+........+.. .. .. ... ..+..
T Consensus 379 ~~~v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~ 458 (539)
T PF03137_consen 379 FCIVVSIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILL 458 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHH
Confidence 1111111111110111100 00 00 001 11122
Q ss_pred HHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhh-hhHHHHHHHHHHHhccC
Q 014698 328 LTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGA-VPGIVGVALTGYLLDST 383 (420)
Q Consensus 328 ~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~-~g~~~~~~~~g~l~~~~ 383 (420)
++..+..+....+........+++++|+.|.|+...+.+ +|.+-+|.++|.+.|..
T Consensus 459 ~~~~~~~~~~~~p~~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~t 515 (539)
T PF03137_consen 459 FILSFFTFMSQVPSTLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDST 515 (539)
T ss_dssp ---------------------------------------------------------
T ss_pred HHHHHHHHhcccchheeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhhh
Confidence 222333344445555566677999999999999987766 68899999999999974
No 119
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.59 E-value=2.5e-13 Score=124.48 Aligned_cols=316 Identities=17% Similarity=0.101 Sum_probs=212.3
Q ss_pred hhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhcc--ccchhhhHHHHHhcCCccc
Q 014698 44 LKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGE--GVSPSAATDLIARSIPLEE 121 (420)
Q Consensus 44 ~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~--~~~~~~~~~~i~~~~~~~~ 121 (420)
.....+.+..-+-+.|+++||..+........+......+ .. +|.++ +.|+.. +.......++++|...+++
T Consensus 72 ~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~-~~-~~~~~----~~~l~g~~~~~~s~~~a~vadis~~~~ 145 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLF-QG-YWFFL----LLGLSGGFSAIFSVGFAYVADISSEEE 145 (463)
T ss_pred HHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHH-HH-HHHhh----hcccccchhhhhhhhhhheeeccchhH
Confidence 3344455666666689999999999999888888777654 33 33333 555433 3566677899999999999
Q ss_pred cchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHH-HHHhhhcccCcccCCCCcCccchhhhhhhhhhh
Q 014698 122 RSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAW-FSGFKILQEGETSNGATLAPRSNYINMKKSLSA 200 (420)
Q Consensus 122 r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (420)
|....|+.+.....+..++|.+++.+.+..|.-.+|.+..+..++. .....++||+.++++++..+.......... ..
T Consensus 146 R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~~~~~~~~-~~ 224 (463)
T KOG2816|consen 146 RSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLRELTPGSLD-SS 224 (463)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCccccccccccccCCCccc-ch
Confidence 9999999999999999999999999999999999999988888775 455667777655443331110000000000 00
Q ss_pred hhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhh-hhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhh-
Q 014698 201 SLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLS-WLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAA- 278 (420)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g- 278 (420)
...+.....+..-++|..+.+.+..+........-.. ..+.|+...++++..+.+.+.+..+....+++.+..
T Consensus 225 -----~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~ 299 (463)
T KOG2816|consen 225 -----HVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLP 299 (463)
T ss_pred -----hhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000000011122245555555555554444433223 558888889999999999999999999999988766
Q ss_pred hhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHH
Q 014698 279 QFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILL 358 (420)
Q Consensus 279 ~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~ 358 (420)
.+...++.+ ..+..+...-........+..+ . +................+..........+++++|++.
T Consensus 300 ~l~~~l~~~---------~~i~lGl~~~~~~~~~~af~~~-~-w~~~~~~v~~~~~~~~~pa~~s~~s~~v~~~e~g~v~ 368 (463)
T KOG2816|consen 300 LLSSILGEK---------RLISLGLLSEFLQLLLFAFATE-T-WMMFAAGVVVALAGIVFPAIRAFASILVSPEEQGKVF 368 (463)
T ss_pred HHHHHHhhh---------hHhhHHHHHHHHHHHHHHHhcc-c-hhhhHHHHHHHhhcchhHHHHhHHHhhcccccccchh
Confidence 666666643 2555666666666666555443 2 2322233334444445666666677778999999999
Q ss_pred HHHHHhhhhhHHHHHHHHHHHhcc
Q 014698 359 GITNTVGAVPGIVGVALTGYLLDS 382 (420)
Q Consensus 359 g~~~~~~~~g~~~~~~~~g~l~~~ 382 (420)
++...+..+.+.++|.+.+.++..
T Consensus 369 ~~is~i~~l~~~~~~~~~~~i~~~ 392 (463)
T KOG2816|consen 369 GIISGIEGLSGVVSPALYGNIFAL 392 (463)
T ss_pred hHHHHHHHHhhhhhHHHHHHHHHH
Confidence 999999999999999999998754
No 120
>PRK10054 putative transporter; Provisional
Probab=99.58 E-value=1e-13 Score=127.48 Aligned_cols=177 Identities=14% Similarity=0.112 Sum_probs=127.6
Q ss_pred cHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHH
Q 014698 220 SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQ 299 (420)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~ 299 (420)
+|+++.+.+..++...+.+....++|.|+++++|++..+.|+..+...+..++++++.|+++||+|+| + .+
T Consensus 6 ~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k-------~--~~ 76 (395)
T PRK10054 6 RRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKK-------R--YM 76 (395)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcc-------h--hH
Confidence 35567777788888888888899999999988999999999999999999999999999999999975 2 22
Q ss_pred HHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHH
Q 014698 300 TIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYL 379 (420)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l 379 (420)
..+.....+........++ .........+.+.+.+...+.......+..|+++|+++.|+.+...++|..++|.+.+.+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l 155 (395)
T PRK10054 77 LLAITAFASGFIAIPLVNN-VTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLL 155 (395)
T ss_pred HHHHHHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2333333333333333222 222333333444444444444555566778899999999999999999999999999998
Q ss_pred hccCCceeeeehhhhHHHHHHHHHHhhhc
Q 014698 380 LDSTHSWSMSLFAPSIFFYLTGTIVWLAF 408 (420)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (420)
.+ . +++..|...+++.++..+......
T Consensus 156 ~~-~-g~~~~f~~~~~~~~i~~i~~~~~~ 182 (395)
T PRK10054 156 VM-Q-SINLPFWLAAICSAFPLVFIQIWV 182 (395)
T ss_pred HH-h-ccCcHHHHHHHHHHHHHHHHHHHH
Confidence 86 3 688888877766655544444433
No 121
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.51 E-value=8.4e-13 Score=122.16 Aligned_cols=173 Identities=12% Similarity=0.093 Sum_probs=124.3
Q ss_pred cHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhh-hhcCcchHHHHHHH
Q 014698 220 SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNL-IATGVETTMVRKIC 298 (420)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-~~~~~~~~~~~~~~ 298 (420)
.+.++......+...+.+++...++|.|+++.+|+++.+++.+.........++.+++|+++||+ |+| +..
T Consensus 8 p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrr--------r~i 79 (493)
T PRK15462 8 PRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNR--------MAV 79 (493)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcH--------HHH
Confidence 45667777778888889999999999999998999999999999999999999999999999999 864 333
Q ss_pred HHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCcc--chHHHHHHHHHhhhhhHHHHHHHH
Q 014698 299 QTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPE--YASILLGITNTVGAVPGIVGVALT 376 (420)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~g~~~g~~~~~~~~g~~~~~~~~ 376 (420)
..+.+...+...+............+.+.+...+.+...+.......+.+|++ +|.++.++.+...++|+.++|.+.
T Consensus 80 -liG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~ 158 (493)
T PRK15462 80 -MLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIAC 158 (493)
T ss_pred -HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHH
Confidence 33333333333222222111222333333444555544454555666777765 699999999999999999999999
Q ss_pred HHHhccCCceeeeehhhhHHHHHHHH
Q 014698 377 GYLLDSTHSWSMSLFAPSIFFYLTGT 402 (420)
Q Consensus 377 g~l~~~~~~~~~~~~~~~~~~~~~~~ 402 (420)
|++.+.. +|+..|...++.++++.+
T Consensus 159 g~L~~~~-Gw~~~F~iaaigm~l~li 183 (493)
T PRK15462 159 GYAQEEY-SWAMGFGLAAVGMIAGLV 183 (493)
T ss_pred HHHHhhh-ChHHHHHHHHHHHHHHHH
Confidence 9999876 788888876654444333
No 122
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.50 E-value=3.3e-13 Score=104.93 Aligned_cols=129 Identities=28% Similarity=0.416 Sum_probs=112.2
Q ss_pred hHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCccccch
Q 014698 45 KDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSR 124 (420)
Q Consensus 45 ~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~ 124 (420)
....++....+.+.||.+||+.+..+.....++.+.... .++++.+.+.+++.|++.+...+....++.|.+|+++|++
T Consensus 9 ~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (141)
T TIGR00880 9 LGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFAL-SSNITVLIIARFLQGFGAAFALVAGAALIADIYPPEERGV 87 (141)
T ss_pred hHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhhhhH
Confidence 344556777777789999999999999998888887765 7889999999999999999999999999999999999999
Q ss_pred hhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhc
Q 014698 125 AVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKIL 174 (420)
Q Consensus 125 ~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 174 (420)
..++.+....+|..++|.+.+.+.+..+|++.|++.+...++..+...++
T Consensus 88 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (141)
T TIGR00880 88 ALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFL 137 (141)
T ss_pred HHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999998999999999888777655444443
No 123
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.50 E-value=9.6e-13 Score=123.52 Aligned_cols=170 Identities=10% Similarity=0.102 Sum_probs=128.5
Q ss_pred HHHHHHHHHHHHhHHHHHHHhhhhhhHhhhh--hCCCcchhhHHHHhhHHHHHHHHHhhhhhhhh-hhhcCcchHHHHHH
Q 014698 221 KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEE--LSLNLTEAAWVSILPPLASVLVTSIAAQFADN-LIATGVETTMVRKI 297 (420)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~~~~~~~~~~~~~~ 297 (420)
+.++.+.+..++..+++++...++|.|+++. +|++..+++.+.+...+...++.+++|+++|| +|+| .
T Consensus 10 ~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~---------~ 80 (475)
T TIGR00924 10 KPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTK---------K 80 (475)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchH---------H
Confidence 4456666777777899999999999999887 89999999999999999999999999999999 7853 3
Q ss_pred HHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCcc---chHHHHHHHHHhhhhhHHHHHH
Q 014698 298 CQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPE---YASILLGITNTVGAVPGIVGVA 374 (420)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~g~~~g~~~~~~~~g~~~~~~ 374 (420)
.+..+.....+...+..... +.....+...+.+++.+...+.......+.+|++ +|+++.++.+...++|..++|.
T Consensus 81 ~l~~~~~~~~~g~~~~~~~~-~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~ 159 (475)
T TIGR00924 81 TMVLGGIVLMLGHFMLAMSI-YPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPL 159 (475)
T ss_pred HHHHHHHHHHHHHHHHHhcc-cHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHH
Confidence 34444444444444444332 2334444556677777766666666666667654 4888999999999999999999
Q ss_pred HHHHHhccCCceeeeehhhhHHHHHHH
Q 014698 375 LTGYLLDSTHSWSMSLFAPSIFFYLTG 401 (420)
Q Consensus 375 ~~g~l~~~~~~~~~~~~~~~~~~~~~~ 401 (420)
+.+++.++. +|+..|...++..+++.
T Consensus 160 l~g~l~~~~-g~~~~f~~~~~~~~~~~ 185 (475)
T TIGR00924 160 LAGVIAENY-GYHVGFNLAAVGMVIGL 185 (475)
T ss_pred HHHHHHHhc-ChHHHHHHHHHHHHHHH
Confidence 999999886 68888888665444443
No 124
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.50 E-value=1.1e-12 Score=118.91 Aligned_cols=165 Identities=19% Similarity=0.254 Sum_probs=126.4
Q ss_pred HHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhH
Q 014698 228 YAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPA 307 (420)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~ 307 (420)
+..++............|.++.+++|.++.+.+++.+...++..++.++.|+++||+|+| + ....+.....
T Consensus 3 l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r--------~-~l~~~~~~~~ 73 (352)
T PF07690_consen 3 LAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRR--------R-VLIIGLLLFA 73 (352)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HH--------H-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCe--------e-eEeehhhhhh
Confidence 445555666666677777667777899999999999999999999999999999999963 3 4444444444
Q ss_pred HHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCcee
Q 014698 308 VCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWS 387 (420)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~ 387 (420)
+...+..+. ++.+...+..++.|++.+...+.....+.+..|+++|+++.+..+....+|..++|.+.+.+.+.. +++
T Consensus 74 ~~~~~~~~~-~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-~~~ 151 (352)
T PF07690_consen 74 LGSLLLAFA-SNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYF-GWR 151 (352)
T ss_dssp HHHHHHHHH-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHC-HHC
T ss_pred hHHHHhhhh-hhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhcc-ccc
Confidence 442222222 334455566688888888788888888888899999999999999999999999999999999775 788
Q ss_pred eeehhhhHHHHHHHHH
Q 014698 388 MSLFAPSIFFYLTGTI 403 (420)
Q Consensus 388 ~~~~~~~~~~~~~~~~ 403 (420)
..+++.++..++..++
T Consensus 152 ~~~~~~~~~~~~~~il 167 (352)
T PF07690_consen 152 WAFLISAILSLIAAIL 167 (352)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred cccccccchhhhhhhh
Confidence 8888887777666654
No 125
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.49 E-value=1.5e-12 Score=119.90 Aligned_cols=174 Identities=13% Similarity=0.156 Sum_probs=129.5
Q ss_pred HHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHH
Q 014698 224 WAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAF 303 (420)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~ 303 (420)
+......++...+.+....++|.|++++.|.|+.+.|+..+...+...+.+++.|+++||+++| ..+..+.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k---------~~l~~~~ 83 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAK---------PMIVTGM 83 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCch---------HHHHHHH
Confidence 4455677777888888889999999888899999999999999999999999999999999964 3334444
Q ss_pred HHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccC
Q 014698 304 LSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDST 383 (420)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 383 (420)
.............+ +.+...+..++.|++.+...+.......+..|+|+|+++.|+.+...++|..++|.+.|.+.+ .
T Consensus 84 ~~~~~~~~~~~~~~-~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~-~ 161 (400)
T PRK11646 84 LMRAAGFATMAIAH-EPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQ-Y 161 (400)
T ss_pred HHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-h
Confidence 44444444443332 344445555667777665566666667777899999999999999999999999999999984 3
Q ss_pred CceeeeehhhhHHHHHHHHHHhhhcc
Q 014698 384 HSWSMSLFAPSIFFYLTGTIVWLAFA 409 (420)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (420)
+++..|++.+...++..++.....+
T Consensus 162 -g~~~~f~~~~~~~~~~~i~~~~~~~ 186 (400)
T PRK11646 162 -DFRLVCATGAVLFVLAAAFNAWLLP 186 (400)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 6887887766655554444333333
No 126
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.47 E-value=3.1e-12 Score=120.84 Aligned_cols=176 Identities=11% Similarity=0.090 Sum_probs=125.0
Q ss_pred hhhhcH-HHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhh-hhhcCcchHH
Q 014698 216 AIFRSK-AVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADN-LIATGVETTM 293 (420)
Q Consensus 216 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~~~~~~~~~~ 293 (420)
+.+|+| .++......++..++++....++|.|+++.+|++..+++..............+++|+++|| +|+|
T Consensus 15 ~~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r------ 88 (500)
T PRK09584 15 NAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTK------ 88 (500)
T ss_pred hhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchH------
Confidence 455666 47888888888899999999999999999999999988887776665555556789999999 5863
Q ss_pred HHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCcc--chHHHHHHHHHhhhhhHHH
Q 014698 294 VRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPE--YASILLGITNTVGAVPGIV 371 (420)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~g~~~g~~~~~~~~g~~~ 371 (420)
.....+.....+...+.....+......+...+.+++.+...+.......+.+|++ ++..+.++.+...++|..+
T Consensus 89 ---~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~ 165 (500)
T PRK09584 89 ---RVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFF 165 (500)
T ss_pred ---HHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHH
Confidence 33333433333333333333222333344456667777766666666666767654 3556888889999999999
Q ss_pred HHHHHHHHhccCCceeeeehhhhHHHHHHH
Q 014698 372 GVALTGYLLDSTHSWSMSLFAPSIFFYLTG 401 (420)
Q Consensus 372 ~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 401 (420)
+|.+.|++.|.. +|+..|.+.++...++.
T Consensus 166 gp~i~g~l~~~~-g~~~~F~i~~i~~~i~~ 194 (500)
T PRK09584 166 SMLATPWLAAKY-GWSVAFALSVVGMLITV 194 (500)
T ss_pred HHHHHHHHHHhh-CHHHHHHHHHHHHHHHH
Confidence 999999999986 78888888665444433
No 127
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.46 E-value=2.2e-12 Score=116.68 Aligned_cols=345 Identities=14% Similarity=0.100 Sum_probs=199.7
Q ss_pred hhHHhHHhhhhcchhhhcc-hhHHHHHHHHHHHHHHHHHHHh---hc-hHHHHHHHHHHHHhccccchhhhHHHHHhcCC
Q 014698 44 LKDTNLLELLRLPLLFVTW-IRKVLQTGVLIWSLATALLPLL---AG-FMPGLVLSRVLVGIGEGVSPSAATDLIARSIP 118 (420)
Q Consensus 44 ~~~~~~~~l~~~p~~~~~~-~r~~~~~~~~~~~~~~~~~~~~---~~-~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~ 118 (420)
..+.++.++..+.+..+.+ -|+.++.+.++..++.++...+ .+ .-+.++++|++.|+|.+.. ....+|+++...
T Consensus 81 slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~-a~lR~Y~a~~s~ 159 (488)
T KOG2325|consen 81 SLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNF-AVLRAYIADAST 159 (488)
T ss_pred HHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccH-HHHHHHHHhccC
Confidence 3333344555555566666 4888999999999998876322 34 5788999999999996544 556899999988
Q ss_pred ccccchhhHHHHhhhhhHHHHHHhhHHHhhhcc--c-----------hhHHHHHHHHHHHHH-HHHhhhcccCcccCCCC
Q 014698 119 LEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL--G-----------WESVFYIFGLLGIAW-FSGFKILQEGETSNGAT 184 (420)
Q Consensus 119 ~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~--g-----------wr~~f~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 184 (420)
.++|.|+++....+..+|.++||.+...+.... | +..+-|+.++..++. +++..++.|.++...++
T Consensus 160 ~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~~~~ 239 (488)
T KOG2325|consen 160 VEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGIIDK 239 (488)
T ss_pred ccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccCcccc
Confidence 899999999999999999999998886655310 1 235567777777774 45556666665544333
Q ss_pred cCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHH
Q 014698 185 LAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSI 264 (420)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 264 (420)
+.+.++ +.+.+. .+.+.++ +..+..+.+.+..+...+......+..+.+....++.+.+++-...+
T Consensus 240 ~~~~~~------~~~~~~--~~~~~~~------~d~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~g 305 (488)
T KOG2325|consen 240 KKRSVE------EEKSDI--EKVKKPK------LDWVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYNG 305 (488)
T ss_pred ccccch------hhccch--hhhccCC------hhHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhhh
Confidence 221110 000000 0000111 11233445555666666666666777777777778887776644433
Q ss_pred h-hHHHHHHHHH-hhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHH-HHHhhcCCC----------------------
Q 014698 265 L-PPLASVLVTS-IAAQFADNLIATGVETTMVRKICQTIAFLSPAVCM-TLSSIDLGL---------------------- 319 (420)
Q Consensus 265 ~-~~~~~~~~~~-~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---------------------- 319 (420)
. ..+.+++... ......-|.++... |..+...+........ .........
T Consensus 306 i~~~~~g~ls~~~~l~~~f~~l~~i~~-----r~~~~~g~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y~wc~ 380 (488)
T KOG2325|consen 306 ITLSISGILSVILLLLYIFTRLGKIDK-----RRIILLGFLIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEYSWCD 380 (488)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhcc-----ceeeeehHHHHHHhhheeeeeccccccccccccccccCcCcccchhhc
Confidence 2 2222222222 22333334332100 2222222222211111 111110000
Q ss_pred -----cHHH--HHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehh
Q 014698 320 -----PHWE--IVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFA 392 (420)
Q Consensus 320 -----~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~ 392 (420)
+... ....+.+|.+.-.......+...+...|++++++.|+.......+..++|.......... +++..+..
T Consensus 381 ~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~-g~~~v~~~ 459 (488)
T KOG2325|consen 381 TTTAVPLILYLISFIVVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLS-GPRPVWII 459 (488)
T ss_pred cCcccChhhheeehhheeccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhc-CccHHHHH
Confidence 0011 111233444444444455666777889999999999999999999999999999988886 67766666
Q ss_pred hhHHHHHHHHHHhhhcc
Q 014698 393 PSIFFYLTGTIVWLAFA 409 (420)
Q Consensus 393 ~~~~~~~~~~~~~~~~~ 409 (420)
..+..+....+.....+
T Consensus 460 ~~~~~l~~~~l~~~~~~ 476 (488)
T KOG2325|consen 460 LLCLLLVVAALWIVFLK 476 (488)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 55544444443333333
No 128
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.45 E-value=3.3e-12 Score=117.95 Aligned_cols=308 Identities=17% Similarity=0.141 Sum_probs=177.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhh---chHHHHHHHHHHHHhccccchhhhHHHHHhcCC--ccccchhhHHHHhhhhhHH
Q 014698 63 IRKVLQTGVLIWSLATALLPLLA---GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIP--LEERSRAVSFVFGGLSFGS 137 (420)
Q Consensus 63 ~r~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~--~~~r~~~~~~~~~~~~~g~ 137 (420)
||+-++++.++..++....+..+ .+.....+.-++..+|.+.....+.++..|... +++|+...+.......+|.
T Consensus 58 r~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~ 137 (433)
T PF03092_consen 58 RKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGS 137 (433)
T ss_pred chHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHH
Confidence 45556666666655555444433 356667777788889999999999999999983 3447888889999999999
Q ss_pred HHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhhhhhhhhhhhhhcccccccchhhh
Q 014698 138 VAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAI 217 (420)
Q Consensus 138 ~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (420)
+++..++|.+.+..++|..|.+.+++..+..+...+++|+++..+..+......+ ..+......+ +.....++.
T Consensus 138 lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~~~e~~~~~~~~~~~~~~~-~~~~~~~~~~-----~~~~~l~~~ 211 (433)
T PF03092_consen 138 LVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVALFLLEERKVRPADEVFSFGKE-EVPCLFGSFR-----EQLSELWRA 211 (433)
T ss_pred HHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHHHhhhhccccccchhhccccc-ccchhhHHHH-----HHHHHHHHH
Confidence 9999999999999999999999888877765555555554222111110000000 0000000001 111224567
Q ss_pred hhcHHHHHHHH-HHHHhHHHHHHHhhhhhhHhhhhhC---CCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHH
Q 014698 218 FRSKAVWAMIY-AHFCGSWGHYTCLSWLPTYFSEELS---LNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTM 293 (420)
Q Consensus 218 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~ 293 (420)
+++|.++...+ ..++............-.+..+..+ +|+...+.+..+..++.+++..+..+...+..
T Consensus 212 ~~~~~i~~~~~~~~~~~~~~~~~~~a~~fy~~~~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~-------- 283 (433)
T PF03092_consen 212 LQQRAIWQPILFFIFFFNLPPSISSASSFYFQTDALGGPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNWS-------- 283 (433)
T ss_pred HhhhHHHHHHHHHHHHHHhccCCCCccEEEEEeccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC--------
Confidence 77788877665 2222222111111101112223345 77777777665555555655555443333322
Q ss_pred HHHHHHHHHHHHhHHHHHHHhhcC--------CCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhh
Q 014698 294 VRKICQTIAFLSPAVCMTLSSIDL--------GLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVG 365 (420)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 365 (420)
.|+......++.....+.-..... +.......--++..........+......+..|+..-|+..++..++.
T Consensus 284 ~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~ 363 (433)
T PF03092_consen 284 WRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFS 363 (433)
T ss_pred HHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHH
Confidence 144444433333322222111100 011111111233334444444555566677889999999999999999
Q ss_pred hhhHHHHHHHHHHHhccCC
Q 014698 366 AVPGIVGVALTGYLLDSTH 384 (420)
Q Consensus 366 ~~g~~~~~~~~g~l~~~~~ 384 (420)
++|..++..++..+.+..+
T Consensus 364 Nlg~~~s~~lg~~l~~~~~ 382 (433)
T PF03092_consen 364 NLGSSVSSTLGAFLMELFG 382 (433)
T ss_pred HHHHHHHHHHHHHHHHHcC
Confidence 9999999999998887653
No 129
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.45 E-value=4.2e-12 Score=119.25 Aligned_cols=166 Identities=11% Similarity=0.129 Sum_probs=126.1
Q ss_pred cHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhh-hhhcCcchHHHHHHH
Q 014698 220 SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADN-LIATGVETTMVRKIC 298 (420)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~~~~~~~~~~~~~~~ 298 (420)
.|.++......+...+++|+...+++.|+++.+|.+..+++++...+.....+..+++|+++|| +||| ..
T Consensus 13 p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r---------~~ 83 (489)
T PRK10207 13 PRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTK---------RT 83 (489)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchH---------HH
Confidence 3566777778888899999999999999999999999999888888887777888899999999 8963 33
Q ss_pred HHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCcc--chHHHHHHHHHhhhhhHHHHHHHH
Q 014698 299 QTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPE--YASILLGITNTVGAVPGIVGVALT 376 (420)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~g~~~g~~~~~~~~g~~~~~~~~ 376 (420)
...+.....+.........+......+...+.+++.+...+.......+.+|++ +|+.+.++.+...++|..++|.+.
T Consensus 84 ~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~ 163 (489)
T PRK10207 84 IVLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLA 163 (489)
T ss_pred HHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHH
Confidence 333433333333333333222223334556678888877777777777888876 457899999999999999999999
Q ss_pred HHHhccCCceeeeehhhhH
Q 014698 377 GYLLDSTHSWSMSLFAPSI 395 (420)
Q Consensus 377 g~l~~~~~~~~~~~~~~~~ 395 (420)
|++.++. +|+..|++.++
T Consensus 164 g~l~~~~-gw~~~F~i~~i 181 (489)
T PRK10207 164 PVIADKF-GYSVTYNLCGA 181 (489)
T ss_pred HHHHHhh-ChHHHHHHHHH
Confidence 9999987 78888887654
No 130
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.44 E-value=2.9e-12 Score=119.54 Aligned_cols=177 Identities=11% Similarity=0.015 Sum_probs=125.7
Q ss_pred HHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHH
Q 014698 221 KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQT 300 (420)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 300 (420)
+.++...+..++.+..........|.+.++ +|.+..+.+++.+...++..+++++.|++.||+|+| ....
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r---------~~~~ 92 (434)
T PRK11663 23 HILITMYLGYALFYFTRKSFNAAMPEMLAD-LGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNAR---------YFMG 92 (434)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHhhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCc---------hhHH
Confidence 334444555555555555667788888876 799999999999999999999999999999999964 2333
Q ss_pred HHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHh
Q 014698 301 IAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLL 380 (420)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 380 (420)
.+.....+...+..... +.....+..++.|++.+...+.......+.+|+++|+++.|+.+....+|..++|.+.+.+.
T Consensus 93 ~~~~~~~~~~~~~~~~~-~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~ 171 (434)
T PRK11663 93 IGLIATGIINILFGFSS-SLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIA 171 (434)
T ss_pred HHHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444433333322 23333333455677776666666666777788899999999999999999999999999999
Q ss_pred ccCCceeeeehhhhHHHHHHHHHHhhhcc
Q 014698 381 DSTHSWSMSLFAPSIFFYLTGTIVWLAFA 409 (420)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (420)
+.. +|+..|.+.++..++......+..+
T Consensus 172 ~~~-gw~~~f~~~~i~~~~~~~~~~~~~~ 199 (434)
T PRK11663 172 LHY-GWRYGMMIAGIIAIVVGLFLCWRLR 199 (434)
T ss_pred Hcc-cHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 886 7988888876655544444433333
No 131
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.44 E-value=1.9e-12 Score=120.30 Aligned_cols=179 Identities=14% Similarity=-0.041 Sum_probs=126.2
Q ss_pred hhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHH
Q 014698 214 WKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTM 293 (420)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~ 293 (420)
++.+.|+|.++...+..++..++........|.+.++. +.++.+.|++.+...++..+++++.|+++||+++|+.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~---- 84 (417)
T PRK10489 10 LSLLKTHPAFRAVFIARFISIFGLGLLGVAVPVQIQMM-TGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKL---- 84 (417)
T ss_pred HHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceE----
Confidence 44555688888887787887888777788889888764 7799999999999999999999999999999997632
Q ss_pred HHHHHHHHHHHHhHHHHHH---Hhh-cCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhH
Q 014698 294 VRKICQTIAFLSPAVCMTL---SSI-DLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPG 369 (420)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~ 369 (420)
.. .+....+..... ... ..++.....+..++.|++.+...+.......+..|+++++++.++.+...++|.
T Consensus 85 ---l~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 159 (417)
T PRK10489 85 ---IL--LARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGS 159 (417)
T ss_pred ---EE--ehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHH
Confidence 11 111111111111 111 122223333444556666665555556666777889999999999999999999
Q ss_pred HHHHHHHHHHhccCCceeeeehhhhHHHHHHHHH
Q 014698 370 IVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTI 403 (420)
Q Consensus 370 ~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 403 (420)
.+||.+.+.+.+.. ++++.+.+.+...++..+.
T Consensus 160 ~~g~~l~g~l~~~~-~~~~~~~~~~~~~~~~~~~ 192 (417)
T PRK10489 160 VISPALGGLLIAAG-GVAWNYGLAAAGTFITLLP 192 (417)
T ss_pred HhHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHH
Confidence 99999999999875 6777777665554444433
No 132
>PRK10504 putative transporter; Provisional
Probab=99.42 E-value=1.1e-11 Score=117.22 Aligned_cols=178 Identities=14% Similarity=0.158 Sum_probs=132.7
Q ss_pred cHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHH
Q 014698 220 SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQ 299 (420)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~ 299 (420)
++.++...+..++.....+....+.|.+.++ +|.++.+.++..+...++..++.++.|+++||+|+| | ..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r-------~-~~- 78 (471)
T PRK10504 9 RWQLWIVAFGFFMQSLDTTIVNTALPSMAQS-LGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVR-------N-IF- 78 (471)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchH-------H-HH-
Confidence 3567777777888777888888899999876 699999999999998899999999999999999964 2 22
Q ss_pred HHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHH
Q 014698 300 TIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYL 379 (420)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l 379 (420)
..+......+....... ++.....+..++.|++.+...+.......+..|+++|+++.|+.+...++|..++|.+.|.+
T Consensus 79 ~~~~~~~~~~~~~~~~~-~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l 157 (471)
T PRK10504 79 FTAIVLFTLGSLFCALS-GTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLL 157 (471)
T ss_pred HHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 23333333333333333 23444455567788888877766666677778999999999999999999999999999999
Q ss_pred hccCCceeeeehhhhHHHHHHHHHHhhhcc
Q 014698 380 LDSTHSWSMSLFAPSIFFYLTGTIVWLAFA 409 (420)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (420)
.+.. +|+..|.+......+.........+
T Consensus 158 ~~~~-gw~~~f~~~~~~~~l~~~~~~~~~~ 186 (471)
T PRK10504 158 VEYA-SWHWIFLINIPVGIIGAIATLMLMP 186 (471)
T ss_pred Hhhc-cHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9986 7888888766555555544444433
No 133
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.42 E-value=1.2e-11 Score=117.46 Aligned_cols=175 Identities=13% Similarity=0.151 Sum_probs=129.3
Q ss_pred HHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHH
Q 014698 225 AMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFL 304 (420)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 304 (420)
...+..+.............|.+.++ +|.++.+.++..+...++..++.++.|++.||+||| .....+..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r---------~~~~~~~~ 75 (485)
T TIGR00711 6 VLMLGTFMAVLDSTIVNVAIPTIAGD-LGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTR---------RLFLISTF 75 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-cCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcH---------HHHHHHHH
Confidence 34445555555556666677877765 699999999999999999999999999999999964 33333333
Q ss_pred HhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCC
Q 014698 305 SPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTH 384 (420)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~ 384 (420)
...+......... +.....+..++.|++.+...+.......+..|+++|+++.++......+|..++|.+.+.+.++.
T Consensus 76 ~~~~~~~~~~~~~-~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~- 153 (485)
T TIGR00711 76 AFTLGSLLCGVAP-NLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENY- 153 (485)
T ss_pred HHHHHHHHHhCcC-CHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCc-
Confidence 3333333333332 34455555677788888777777777888889999999999999999999999999999999885
Q ss_pred ceeeeehhhhHHHHHHHHHHhhhccCC
Q 014698 385 SWSMSLFAPSIFFYLTGTIVWLAFASS 411 (420)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (420)
+|+..|++.+...++...+.+...+++
T Consensus 154 ~w~~~f~~~~~~~~~~~~~~~~~~~~~ 180 (485)
T TIGR00711 154 HWRWIFLINVPIGIIVVVVAFFILPRD 180 (485)
T ss_pred CceehhhhhhHHHHHHHHHHHHHcCCc
Confidence 788888887766665555555554443
No 134
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.42 E-value=1.8e-11 Score=108.38 Aligned_cols=178 Identities=17% Similarity=0.147 Sum_probs=149.0
Q ss_pred cHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHH
Q 014698 220 SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQ 299 (420)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~ 299 (420)
...++.+.+..|......+.....+|...+| +|.|..++|+..+.+..+..++.++...+.||+.|| ..+
T Consensus 12 ~~~l~aLa~~~F~igttEfv~~gLLp~iA~d-l~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr---------~lL 81 (394)
T COG2814 12 WLALLALALAAFAIGTTEFVPVGLLPPIAAD-LGVSEGAAGQLITAYALGVALGAPLLALLTGRLERR---------RLL 81 (394)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHhchHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchH---------HHH
Confidence 4566777888888899999999999999987 699999999999999999999999999999999853 444
Q ss_pred HHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHH
Q 014698 300 TIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYL 379 (420)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l 379 (420)
.....+..+.-.+....++ .....+.=++.++..+.+.........+.+||++|+++.++......++..+|.+++.++
T Consensus 82 l~~l~lFi~~n~l~alAp~-f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~i 160 (394)
T COG2814 82 LGLLALFIVSNLLSALAPS-FAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFL 160 (394)
T ss_pred HHHHHHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHH
Confidence 4444444555555554433 444455558889999988888888888889999999999999999999999999999999
Q ss_pred hccCCceeeeehhhhHHHHHHHHHHhhhcc
Q 014698 380 LDSTHSWSMSLFAPSIFFYLTGTIVWLAFA 409 (420)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (420)
-|.. +|+.+|...+.+.+++.+..+...+
T Consensus 161 g~~~-GWR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 161 GQLF-GWRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HHHh-hHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9997 8999999999988888888887777
No 135
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.41 E-value=8.4e-12 Score=114.78 Aligned_cols=175 Identities=15% Similarity=0.069 Sum_probs=123.3
Q ss_pred HHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHH
Q 014698 225 AMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFL 304 (420)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 304 (420)
....................|.+.+ ++|.++.+.++..+...++..++.++.|++.||+|+| +.. ..+..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r--------~~~-~~~~~ 78 (385)
T TIGR00710 9 LLGCLSILGPLGIDMYLPAFPEIAA-DLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRR--------PVL-LLGLF 78 (385)
T ss_pred HHHHHHHHHHHHHHHhcccHHHHHH-HhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCCh--------HHH-HHHHH
Confidence 3333334444455555556666655 5799999999999999999999999999999999964 222 23333
Q ss_pred HhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCC
Q 014698 305 SPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTH 384 (420)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~ 384 (420)
...+........ ++.....+..++.|++.+...+.......+..|+++|+++.+..+....+|..++|.+.+.+.+..
T Consensus 79 ~~~~~~~~~~~~-~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~- 156 (385)
T TIGR00710 79 IFALSSLGLALS-NNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWL- 156 (385)
T ss_pred HHHHHHHHHHHH-ccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-
Confidence 333333333332 224444455567787777677777777777789999999999999999999999999999999875
Q ss_pred ceeeeehhhhHHHHHHHHHHhhhccCC
Q 014698 385 SWSMSLFAPSIFFYLTGTIVWLAFASS 411 (420)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (420)
+++..+.+.++..++..+..+...+++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (385)
T TIGR00710 157 SWHAIFAFLSLAGILLSALIFFILPET 183 (385)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 788778777666655555555444443
No 136
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.41 E-value=2e-11 Score=115.70 Aligned_cols=177 Identities=11% Similarity=0.066 Sum_probs=129.0
Q ss_pred HHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHH
Q 014698 223 VWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIA 302 (420)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 302 (420)
+....+..+....-......-+|.+.++ +|.+..+.++..+.+.++...+.+..|+++||+||| ..+..+
T Consensus 8 ~~~~~~~~~~~~ld~tiv~~a~p~i~~~-l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk---------~~l~~~ 77 (495)
T PRK14995 8 LVIIVLVYIPVAIDATVLHVAAPTLSMT-LGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFK---------RLLMLG 77 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccH---------HHHHHH
Confidence 3445556666666666677788888765 699999999999999999999999999999999964 333444
Q ss_pred HHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhcc-CccchHHHHHHHHHhhhhhHHHHHHHHHHHhc
Q 014698 303 FLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDI-SPEYASILLGITNTVGAVPGIVGVALTGYLLD 381 (420)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 381 (420)
.....+......... +....++.-++.|++.+...+.......+.+ |+++|+++.|+......+|..+||.+.|.+.+
T Consensus 78 ~~~~~~~~~~~~~a~-~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~ 156 (495)
T PRK14995 78 GTLFGLASLAAAFSP-TASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLE 156 (495)
T ss_pred HHHHHHHHHHHHHcC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 444444444444332 3444455557778887766665555565665 67899999999999999999999999999999
Q ss_pred cCCceeeeehhhhHHHHHHHHHHhhhccCC
Q 014698 382 STHSWSMSLFAPSIFFYLTGTIVWLAFASS 411 (420)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (420)
+. +|++.|++...+.++...+.....+++
T Consensus 157 ~~-gwr~~f~i~~~~~~~~~~l~~~~l~~~ 185 (495)
T PRK14995 157 HF-YWGSVFLINVPIVLVVMGLTARYVPRQ 185 (495)
T ss_pred cC-ChHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 86 799888887666665555555555543
No 137
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.40 E-value=7.3e-12 Score=114.22 Aligned_cols=170 Identities=14% Similarity=0.096 Sum_probs=122.2
Q ss_pred HHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHH
Q 014698 226 MIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLS 305 (420)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~ 305 (420)
.....++...+.......+|.|..+ .+.++.+.+++.+...++..++.++.|+++||+||| +.........
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r--------~~~~~~~~~~ 74 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVLA-GTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRK--------KVMIGADLIR 74 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH-hhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchh--------HHHHHHHHHH
Confidence 4455566666666777788888877 589999999999999999999999999999999964 2322222222
Q ss_pred hHHHHHHHhhc--C-CCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhcc
Q 014698 306 PAVCMTLSSID--L-GLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDS 382 (420)
Q Consensus 306 ~~~~~~~~~~~--~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 382 (420)
........... . .+.+...+..++.|++.+...+.......+..|+++|+++.|..+....+|..++|.+.+.+.+.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~ 154 (365)
T TIGR00900 75 AVLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYAT 154 (365)
T ss_pred HHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222211111 1 13444455567778888777777777777888999999999999999999999999999999987
Q ss_pred CCceeeeehhhhHHHHHHHHHHh
Q 014698 383 THSWSMSLFAPSIFFYLTGTIVW 405 (420)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~ 405 (420)
. +++..+++.++..++.....+
T Consensus 155 ~-g~~~~~~~~~~~~~~~~~~~~ 176 (365)
T TIGR00900 155 L-GIKWAIWVDAVGFAISALLIV 176 (365)
T ss_pred h-hHHHHHHHHHHHHHHHHHHHH
Confidence 5 788777776655544444333
No 138
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.40 E-value=2.1e-11 Score=112.81 Aligned_cols=177 Identities=14% Similarity=0.078 Sum_probs=125.7
Q ss_pred HHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHH
Q 014698 224 WAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAF 303 (420)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~ 303 (420)
....+.+++............| .+++++|.+..+.++..+...++..+++++.|++.||+|+| ..+..+.
T Consensus 11 ~~~~~~~~~~~~d~~~~~~~~~-~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r---------~~~~~~~ 80 (412)
T TIGR02332 11 IFLFILFIFSFLDRINIGFAGL-TMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGAR---------RWIAGIM 80 (412)
T ss_pred HHHHHHHHHHHhhhhhHHHHHH-hhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChH---------HHHHHHH
Confidence 3334444444444444555555 66777899999999999999999999999999999999964 3334444
Q ss_pred HHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhcc-
Q 014698 304 LSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDS- 382 (420)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~- 382 (420)
+...+........++ .....+.-++.|++.+...+.......+.+|+++|+++.|+.+....+|..+++.+.+.+.+.
T Consensus 81 ~~~~~~~~~~~~~~~-~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 159 (412)
T TIGR02332 81 VLWGIASTATMFATG-PESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALD 159 (412)
T ss_pred HHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 444444444433332 444555557788888877666666667778999999999999999999999999999988752
Q ss_pred ----CCceeeeehhhhHHHHHHHHHHhhhccCC
Q 014698 383 ----THSWSMSLFAPSIFFYLTGTIVWLAFASS 411 (420)
Q Consensus 383 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (420)
..+|+..|.+.++..++...+.++..+++
T Consensus 160 ~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~ 192 (412)
T TIGR02332 160 GLMALKGWQWLFLLEGFPSVILGVMTWFWLDDS 192 (412)
T ss_pred CCCCccchhHHHHHHHHHHHHHHHHHhhccCCC
Confidence 13788899887766655555555555443
No 139
>PRK03545 putative arabinose transporter; Provisional
Probab=99.40 E-value=1.6e-11 Score=113.04 Aligned_cols=175 Identities=11% Similarity=0.037 Sum_probs=121.0
Q ss_pred HHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHH
Q 014698 223 VWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIA 302 (420)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 302 (420)
++...+..+......+......|.+.+ ++|.++.+.++..+...++..++++..|.+.||+|+| ..+..+
T Consensus 11 ~~~l~~~~~~~~~~~~~~~~~~~~l~~-~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r---------~~~~~~ 80 (390)
T PRK03545 11 VVTLALAAFIFNTTEFVPVGLLSDIAQ-SFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERR---------KLLIGL 80 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHcchHHHHh-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChH---------HHHHHH
Confidence 344444444433333333445666554 5799999999999999999999999999999999963 333334
Q ss_pred HHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhcc
Q 014698 303 FLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDS 382 (420)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 382 (420)
.....+........+ +.....+.-++.|.+.+...+.......+..|+|+|+++.|+......+|..++|.+.+.+.+.
T Consensus 81 ~~~~~~~~~~~~~~~-~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~ 159 (390)
T PRK03545 81 FVLFIASHVLSALAW-NFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQY 159 (390)
T ss_pred HHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 444444433333332 2444444446667776655566666667778999999999999999999999999999999887
Q ss_pred CCceeeeehhhhHHHHHHHHHHhhhcc
Q 014698 383 THSWSMSLFAPSIFFYLTGTIVWLAFA 409 (420)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (420)
. +|+..|.+.++..++.....+...+
T Consensus 160 ~-gw~~~f~~~~~~~~l~~~~~~~~~~ 185 (390)
T PRK03545 160 L-GWRTTFLAIGGGALITLLLLIKLLP 185 (390)
T ss_pred h-cHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 6 7888888877766555544444333
No 140
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.40 E-value=1.9e-11 Score=111.62 Aligned_cols=173 Identities=14% Similarity=0.157 Sum_probs=117.6
Q ss_pred HHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHH
Q 014698 222 AVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTI 301 (420)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 301 (420)
.++...+..+......+....+.|.++++++|.|+.+.++..+...++..++.++.|+++||+|+| +. +..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r--------~~-~~~ 72 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPR--------YT-TTL 72 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCch--------HH-HHH
Confidence 345566666666777777888899878888999999999999999999999999999999999964 22 333
Q ss_pred HHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhc
Q 014698 302 AFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLD 381 (420)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 381 (420)
+.....+..........+.....+..++.|++.+ ........+.+..|+++|+++.++.....++|..+++.+.+.+.+
T Consensus 73 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 151 (366)
T TIGR00886 73 SLLLLAIPCLWAGLAVQSYSVLLLLRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIG 151 (366)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 3333333333333332123334444566676644 344455566677888999999999998888888888888776664
Q ss_pred c---------CCceeeee-hhhhHHHHHHHHHH
Q 014698 382 S---------THSWSMSL-FAPSIFFYLTGTIV 404 (420)
Q Consensus 382 ~---------~~~~~~~~-~~~~~~~~~~~~~~ 404 (420)
. ..+|+..+ ...++...+...+.
T Consensus 152 ~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~ 184 (366)
T TIGR00886 152 SLIFGAGLPAHLAWGWAFVIVPAGILLLPALLI 184 (366)
T ss_pred HHHhcccccccccccchhHHHHHHHHHHHHHHH
Confidence 2 12577777 33333333333333
No 141
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.39 E-value=6.6e-12 Score=116.75 Aligned_cols=183 Identities=13% Similarity=0.133 Sum_probs=116.1
Q ss_pred hhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHH
Q 014698 216 AIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVR 295 (420)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~ 295 (420)
+.+|+|++|...+..++...+......++|.|+++++|+++.+.|+..+...++..+++++.|+++||+|+| |
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r-------~ 77 (420)
T PRK09528 5 YYLKNPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLK-------K 77 (420)
T ss_pred hhhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch-------H
Confidence 456688999998888888888888899999999998999999999999999999999999999999999975 3
Q ss_pred HHHHHHHHHHhHHH-HHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhh---hhhhhccCccchHHHHHHHHHhhhhhHHH
Q 014698 296 KICQTIAFLSPAVC-MTLSSIDLGLPHWEIVGILTAGLALSSFALSGL---YCTHQDISPEYASILLGITNTVGAVPGIV 371 (420)
Q Consensus 296 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~g~~~g~~~~~~~~g~~~ 371 (420)
.............. .....................++..+....... ....++. +++++...|..+....+|..+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~g~~i 156 (420)
T PRK09528 78 HLLWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERV-SRRSGFEYGRARMWGSLGWAL 156 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHH-HhhccccchhhHHhhhHHHHH
Confidence 32221111111111 111100000000011111222222221111111 1111222 345677888888889999999
Q ss_pred HHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhc
Q 014698 372 GVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAF 408 (420)
Q Consensus 372 ~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (420)
+|.+.|.+.+. +++..|++.++..++...+.+...
T Consensus 157 ~~~~~g~l~~~--~~~~~f~~~~~~~~~~~~~~~~~~ 191 (420)
T PRK09528 157 CAFIAGILFNI--NPQINFWLGSGSALILLVLLFFAK 191 (420)
T ss_pred HHHHHHHHHhc--CchHhHHHHHHHHHHHHHHHhccc
Confidence 99999999875 566777776655555544444433
No 142
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.39 E-value=1.7e-11 Score=112.38 Aligned_cols=178 Identities=13% Similarity=0.174 Sum_probs=130.4
Q ss_pred HHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHH
Q 014698 221 KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQT 300 (420)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 300 (420)
+.++...+..+............+|.+.++ +|.+..+.++..+...++..+++++.|++.||+|+| ....
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r---------~~~~ 72 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAHD-VGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLK---------HILL 72 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHHHH-cCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccH---------HHHH
Confidence 456666777777777777777888887655 799999999999999999999999999999999963 3333
Q ss_pred HHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHh
Q 014698 301 IAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLL 380 (420)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 380 (420)
.+....++...+....+ +.....+.-++.|++.+...+.......+..|+++|+++.+.......++..++|.+.+.+.
T Consensus 73 ~~~~~~~~~~~l~~~~~-~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~ 151 (382)
T PRK10091 73 FLVALCVIGNAMFTLSS-SYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLS 151 (382)
T ss_pred HHHHHHHHHHHHHHHhC-cHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHh
Confidence 44444444444444433 34445555577788777655555555556678888999999999999999999999999998
Q ss_pred ccCCceeeeehhhhHHHHHHHHHHhhhccC
Q 014698 381 DSTHSWSMSLFAPSIFFYLTGTIVWLAFAS 410 (420)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (420)
+.. +|+..|.+.++...+..+..+...++
T Consensus 152 ~~~-gwr~~f~~~~~~~~~~~~~~~~~lp~ 180 (382)
T PRK10091 152 QEF-SWRYTFLLIAVFNIAVLASIYFWVPD 180 (382)
T ss_pred hhc-cHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 875 78888888776655554444444444
No 143
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.39 E-value=2.8e-11 Score=111.29 Aligned_cols=155 Identities=14% Similarity=0.110 Sum_probs=115.4
Q ss_pred HHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhh
Q 014698 236 GHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSI 315 (420)
Q Consensus 236 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (420)
..+.....+|.+.++ +|.++.+.++..+...++..+++++.|++.||+||| ..+..+.....+.......
T Consensus 35 ~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr---------~~~~~~~~~~~~~~~~~~~ 104 (394)
T PRK10213 35 VEFLPVSLLTPMAQD-LGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRR---------YVVILFAVLLTLSCLLVSF 104 (394)
T ss_pred HHHHHHhhHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcH---------HHHHHHHHHHHHHHHHHHH
Confidence 333444567776654 699999999999999999999999999999999963 3333343333333333333
Q ss_pred cCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhH
Q 014698 316 DLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSI 395 (420)
Q Consensus 316 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~ 395 (420)
. ++.+..++.-++.|++.+...+.....+.+.+|+++|+++.++.....+++..++|.+.+.+.+.. +|+..|++.+.
T Consensus 105 ~-~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~-gw~~~f~~~~~ 182 (394)
T PRK10213 105 A-NSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELI-GWRNVFNAAAV 182 (394)
T ss_pred H-ChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CHHHHHHHHHH
Confidence 3 334455555577888888777777777778889999999999999999999999999999999886 78888887665
Q ss_pred HHHHHHH
Q 014698 396 FFYLTGT 402 (420)
Q Consensus 396 ~~~~~~~ 402 (420)
..+++..
T Consensus 183 l~~~~~l 189 (394)
T PRK10213 183 MGVLCIF 189 (394)
T ss_pred HHHHHHH
Confidence 5444333
No 144
>PRK03699 putative transporter; Provisional
Probab=99.39 E-value=4.2e-11 Score=110.34 Aligned_cols=172 Identities=8% Similarity=0.019 Sum_probs=120.9
Q ss_pred HHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHH
Q 014698 221 KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQT 300 (420)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 300 (420)
+-.+...+..++...........+|.+.+ ++|.|..+.++..+...++..++.++.|++.||+|+| ..+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~g~~~~~i~~-~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r---------~~~~ 76 (394)
T PRK03699 7 KLTWISFLSYALTGALVIVTGMVMGPIAE-YFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLK---------RQLI 76 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHH-HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH---------HHHH
Confidence 34455555555555555566667777665 5799999999999999999999999999999999964 2333
Q ss_pred HHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHh
Q 014698 301 IAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLL 380 (420)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 380 (420)
.+.....+...+.... ++.....+..++.|.+.+...+.......+..|+++|+.+.+..+....+++.++|.+.+.+.
T Consensus 77 ~~~~~~~i~~~l~~~~-~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 155 (394)
T PRK03699 77 FGFALMILAVAGLMFS-HSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLL 155 (394)
T ss_pred HHHHHHHHHHHHHHHc-chHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333333333332 223344445566777777666566666667788889999999998888899999999999887
Q ss_pred ccCCceeeeehhhhHHHHHHHHH
Q 014698 381 DSTHSWSMSLFAPSIFFYLTGTI 403 (420)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~ 403 (420)
+...+|+..|...++..++..++
T Consensus 156 ~~~~gw~~~f~~~~~~~~~~~~~ 178 (394)
T PRK03699 156 ARSIEWYWVYACIGLVYVAIFIL 178 (394)
T ss_pred hccccHHHHHHHHHHHHHHHHHH
Confidence 65458888888766655444433
No 145
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.38 E-value=3.1e-11 Score=111.29 Aligned_cols=180 Identities=9% Similarity=0.060 Sum_probs=126.8
Q ss_pred HHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHH
Q 014698 221 KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQT 300 (420)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 300 (420)
|-+.......+....+.......+|.+.++ +|.+..+.++..+...++..++.++.|+++||+||| + .+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r--------~-~l~ 72 (392)
T PRK10473 3 RFLLCSFALVLLYPAGIDMYLVGLPRIAAD-LNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRK--------P-VAI 72 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCCh--------H-HHH
Confidence 444445555555556666666778877765 699999999999999999999999999999999964 2 233
Q ss_pred HHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHh
Q 014698 301 IAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLL 380 (420)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 380 (420)
.+.....+......... +.....+..++.|.+.+...........+..|+++|+++.+..+....++..++|.+.+.+.
T Consensus 73 ~~~~~~~i~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~ 151 (392)
T PRK10473 73 PGAALFIIASLLCSLAE-TSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIM 151 (392)
T ss_pred HHHHHHHHHHHHHHHhC-cHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333333322 23334444566677777666666667777789999999999999999999999999999888
Q ss_pred ccCCceeeeehhhhHHHHHHHHHHhhhccCCC
Q 014698 381 DSTHSWSMSLFAPSIFFYLTGTIVWLAFASSK 412 (420)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (420)
+.. +|+..+.+.+++.++...+.+...++++
T Consensus 152 ~~~-g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 182 (392)
T PRK10473 152 LKF-PWQSLFYTMAAMGILVLLLSLFILKETR 182 (392)
T ss_pred hCc-ChHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 775 7887787777666666555555555443
No 146
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.38 E-value=1.4e-11 Score=113.90 Aligned_cols=165 Identities=15% Similarity=0.066 Sum_probs=120.1
Q ss_pred cHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHH
Q 014698 220 SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQ 299 (420)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~ 299 (420)
++++....+..+....+.......+|.++++++|.|+.+.|+..+...++..+++++.|+++||+||| | .+.
T Consensus 14 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r-------~-~l~ 85 (399)
T PRK05122 14 TLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPK-------K-AVV 85 (399)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCc-------c-hHH
Confidence 56777778888888888888888999999888899999999999999999999999999999999975 2 222
Q ss_pred HHHHHHhH--HHHHHHhhcCC----CcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHH
Q 014698 300 TIAFLSPA--VCMTLSSIDLG----LPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGV 373 (420)
Q Consensus 300 ~~~~~~~~--~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~ 373 (420)
........ ..........+ +....++.-++.|.+.+...+.......+..|+++|+++.++......+|..++|
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 165 (399)
T PRK05122 86 FGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGA 165 (399)
T ss_pred HHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHH
Confidence 22211111 11111111111 1112333446778777766666666666778999999999999888899999999
Q ss_pred HHHHHHhccCCceeeeehhh
Q 014698 374 ALTGYLLDSTHSWSMSLFAP 393 (420)
Q Consensus 374 ~~~g~l~~~~~~~~~~~~~~ 393 (420)
.+.+.+.+.. +++..+.+.
T Consensus 166 ~l~~~l~~~~-g~~~~~~~~ 184 (399)
T PRK05122 166 PLGVLLYHWG-GLAGLGLLI 184 (399)
T ss_pred HHHHHHHHcc-cHHHHHHHH
Confidence 9999999876 566555443
No 147
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.38 E-value=1.6e-11 Score=112.50 Aligned_cols=173 Identities=13% Similarity=0.109 Sum_probs=115.6
Q ss_pred HHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhH
Q 014698 228 YAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPA 307 (420)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~ 307 (420)
+..++...+.......+|.|+++++|.|+.+.|+..+...+...+.+++.|+++||+|+| |... ..+.....
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r-------~~~~-~~~~~~~~ 75 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDR-------KGLI-LFCCLLAA 75 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc-------hHHH-HHHHHHHH
Confidence 456666777777788999999888899999999999999999999999999999999975 3333 23333323
Q ss_pred HHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHH--HHHHHHhhhhhHHHHHHHHHHHhccCCc
Q 014698 308 VCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASIL--LGITNTVGAVPGIVGVALTGYLLDSTHS 385 (420)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~--~g~~~~~~~~g~~~~~~~~g~l~~~~~~ 385 (420)
....+....+ +.....+.-.+.+.+.+...+.......+..|++.|+.+ .+.......+|..++|.+.+.+.+.. +
T Consensus 76 ~~~~~~~~~~-~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~-~ 153 (375)
T TIGR00899 76 LACLLFAWNR-NYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGF-G 153 (375)
T ss_pred HHHHHHHhcc-hHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhc-c
Confidence 3222223322 222233333444444443444333334444455556544 57777888899999999999999875 7
Q ss_pred eeeeehhhhHHHHHHHHHHhhhccC
Q 014698 386 WSMSLFAPSIFFYLTGTIVWLAFAS 410 (420)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (420)
|+..|++.+.+.++..+..+...++
T Consensus 154 ~~~~f~~~~~~~~~~~~~~~~~~~~ 178 (375)
T TIGR00899 154 FTVMFLTAALAFVLCGVLVWLFLPS 178 (375)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 8888888777666655555554443
No 148
>PRK12382 putative transporter; Provisional
Probab=99.37 E-value=2.4e-11 Score=111.95 Aligned_cols=160 Identities=18% Similarity=0.126 Sum_probs=114.7
Q ss_pred cHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHH
Q 014698 220 SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQ 299 (420)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~ 299 (420)
++.++...+..++...........+|.++++++|.|+.+.|+..+...+...+++++.|+++||+||| | .+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r-------~-~l- 84 (392)
T PRK12382 14 NFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAK-------R-SA- 84 (392)
T ss_pred cccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcch-------H-HH-
Confidence 55666666666666666777777889898888899999999999999999999999999999999975 2 22
Q ss_pred HHHHHHhHHH---HHHHhhcC----CCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHH
Q 014698 300 TIAFLSPAVC---MTLSSIDL----GLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVG 372 (420)
Q Consensus 300 ~~~~~~~~~~---~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~ 372 (420)
..+.....+. ........ .+.....+.-++.|.+.+...+.......+..|+|+|+++.|........+..++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g 164 (392)
T PRK12382 85 LQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAG 164 (392)
T ss_pred HHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHH
Confidence 2222222111 11111111 1123334444677777776555555666677899999999999999899999999
Q ss_pred HHHHHHHhccCCceeee
Q 014698 373 VALTGYLLDSTHSWSMS 389 (420)
Q Consensus 373 ~~~~g~l~~~~~~~~~~ 389 (420)
|.+.+.+.+.. +|+..
T Consensus 165 ~~~~~~l~~~~-g~~~~ 180 (392)
T PRK12382 165 APLGLLLHSHF-GFAAL 180 (392)
T ss_pred HHHHHHHHhcc-ChHHH
Confidence 99999998875 56543
No 149
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.37 E-value=3.8e-12 Score=111.27 Aligned_cols=174 Identities=10% Similarity=0.039 Sum_probs=137.0
Q ss_pred HHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHH
Q 014698 225 AMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFL 304 (420)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 304 (420)
...+.+..+++.--.+..-.|...+ +.++|..|.|.+.+...+..-++..+.|.++||.+.| ..+..+++
T Consensus 33 ~~fiGYa~fYl~RknF~~a~p~l~e-~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr---------~fm~~gLi 102 (448)
T COG2271 33 SIFIGYAAFYLTRKNFNLAMPALIE-DGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPR---------YFMAFGLI 102 (448)
T ss_pred HHHHHHHHHHHHHHhHhhccHHHHH-hcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCc---------eeehHHHH
Confidence 3344444444444445555565555 4589999999999999999999999999999999864 44556666
Q ss_pred HhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHH--HHHhcc
Q 014698 305 SPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALT--GYLLDS 382 (420)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~--g~l~~~ 382 (420)
+.++..+++.+.. +.....+...+.|.+.+...+++.-.+.+-+++++||+..++-|+..++|+.+.|.+. +.+.++
T Consensus 103 lsai~nil~Gfs~-s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~ 181 (448)
T COG2271 103 LSAIVNILFGFSP-SLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFH 181 (448)
T ss_pred HHHHHHHHHhhhh-HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhc
Confidence 6666666666544 3444555567889999988888888888889999999999999999999999999999 888888
Q ss_pred CCceeeeehhhhHHHHHHHHHHhhhccC
Q 014698 383 THSWSMSLFAPSIFFYLTGTIVWLAFAS 410 (420)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (420)
. +++..|++-+++.++.+++.+...+.
T Consensus 182 ~-~w~~~f~~pgiiaiival~~~~~~rd 208 (448)
T COG2271 182 G-GWRAAFYFPGIIAIIVALILLFLLRD 208 (448)
T ss_pred c-chhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 5 89999999999888888777766554
No 150
>PRK11043 putative transporter; Provisional
Probab=99.36 E-value=3e-11 Score=111.71 Aligned_cols=168 Identities=11% Similarity=-0.022 Sum_probs=114.8
Q ss_pred HHHHhHHHHHHHhhhhhhH--hhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHh
Q 014698 229 AHFCGSWGHYTCLSWLPTY--FSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSP 306 (420)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~ 306 (420)
..+.....+.....+.|.+ +++++|.++.+.++..+...++..++.++.|+++||+++| + . +..+....
T Consensus 11 ~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r-------~-~-~~~~~~~~ 81 (401)
T PRK11043 11 LAGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRK-------P-V-LLAGLSLF 81 (401)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCc-------H-H-HHHHHHHH
Confidence 3333444444555555654 4566799999999999999999999999999999999975 2 2 22333333
Q ss_pred HHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCce
Q 014698 307 AVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSW 386 (420)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~ 386 (420)
.+......... +.....+..++.|++.+...........+.+|++++++..+..+....++..++|.+.+.+.+.. +|
T Consensus 82 ~~~~~~~~~~~-~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~-g~ 159 (401)
T PRK11043 82 ALGSLGMLWVE-SAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHF-GW 159 (401)
T ss_pred HHHHHHHHHhc-CHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-Ch
Confidence 33333333322 23344444466666665555444555667788888999999999889999999999999999886 78
Q ss_pred eeeehhhhHHHHHHHHHHhhh
Q 014698 387 SMSLFAPSIFFYLTGTIVWLA 407 (420)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~ 407 (420)
+..+.+.++..++..+..+..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~ 180 (401)
T PRK11043 160 QAIFATLFAITLLLILPTLRL 180 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHc
Confidence 878877766555554444333
No 151
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.36 E-value=4.1e-11 Score=110.68 Aligned_cols=155 Identities=16% Similarity=0.069 Sum_probs=109.0
Q ss_pred cHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHH
Q 014698 220 SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQ 299 (420)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~ 299 (420)
.|.+....+..++...+.+....+.|.++++ +|.++.+.++..+...++..++.++.|++.||+|+| +. .
T Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k--------~~-l 81 (402)
T TIGR00897 12 PLNLLWGYIGVVVFMTGDGLEQGWLSPFLKA-LGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPL--------KT-M 81 (402)
T ss_pred CchhhHHHHHHHHHHHhhhhHHHhHHHHHHH-hCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcH--------HH-H
Confidence 3556666677777777777777788888866 699999999999999999999999999999999964 22 2
Q ss_pred HHHHHHhHHHHHHH---hhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhH-HHHHHH
Q 014698 300 TIAFLSPAVCMTLS---SIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPG-IVGVAL 375 (420)
Q Consensus 300 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~-~~~~~~ 375 (420)
..+.....+..... .....+.........+.|.+.+...+.......+..|+++|++++|+.+...++|. .++|.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~ 161 (402)
T TIGR00897 82 MIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYY 161 (402)
T ss_pred HHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22332222222211 11112233333344555666655544455556677899999999999999999986 588999
Q ss_pred HHHHhccCC
Q 014698 376 TGYLLDSTH 384 (420)
Q Consensus 376 ~g~l~~~~~ 384 (420)
.+.+.+..+
T Consensus 162 ~~~l~~~~g 170 (402)
T TIGR00897 162 SSYAIPAFG 170 (402)
T ss_pred HHhcccccc
Confidence 999888763
No 152
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.35 E-value=5e-11 Score=110.57 Aligned_cols=178 Identities=15% Similarity=0.141 Sum_probs=123.0
Q ss_pred cHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcch-----hhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHH
Q 014698 220 SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTE-----AAWVSILPPLASVLVTSIAAQFADNLIATGVETTMV 294 (420)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-----~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~ 294 (420)
++.+....+..++..........++|.+.++ +|.+..+ .+...+...+...++.++.|+++||+++|
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r------- 84 (408)
T PRK09874 13 KRNLTVAWLGCFLTGAAFSLVMPFLPLYVEQ-LGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRK------- 84 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHH-hCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcH-------
Confidence 3445555666677777777778899999976 5887654 37888888999999999999999999964
Q ss_pred HHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHH
Q 014698 295 RKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVA 374 (420)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~ 374 (420)
+.+ ..+.........+.... ++.....+..++.|++.+ ..+.......+..|+++|+++.|..+....+|..++|.
T Consensus 85 -~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 160 (408)
T PRK09874 85 -IML-LRSALGMGIVMVLMGLA-QNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPL 160 (408)
T ss_pred -HHH-HHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHH
Confidence 232 23333333333333332 223344444455666543 44444455667788899999999999999999999999
Q ss_pred HHHHHhccCCceeeeehhhhHHHHHHHHHHhhhccC
Q 014698 375 LTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFAS 410 (420)
Q Consensus 375 ~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (420)
+.+.+.+.. +++..+.+.++..++..+..+...++
T Consensus 161 ~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (408)
T PRK09874 161 AGGLLADSY-GLRPVFFITASVLFLCFLVTLFCIRE 195 (408)
T ss_pred HHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999998875 68878877776666555555554443
No 153
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.35 E-value=3.8e-11 Score=108.86 Aligned_cols=164 Identities=13% Similarity=0.019 Sum_probs=116.8
Q ss_pred HHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHh
Q 014698 235 WGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSS 314 (420)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (420)
.....+...+|.+.+| +|.|+.+.|++.+...++..++++..|+++||+||| +. ................
T Consensus 5 ~~~~~~~~~lp~i~~~-~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr--------~~-~~~~~~~~~~~~~~~~ 74 (368)
T TIGR00903 5 AIWVTFSPVLSLVAED-IDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKR--------WF-LFGSLATFAAAAGRLL 74 (368)
T ss_pred HHHHHHHhhHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccch--------HH-HHHHHHHHHHHHHHHH
Confidence 3444555566766654 799999999999999999999999999999999953 32 2222222222222111
Q ss_pred hcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhh
Q 014698 315 IDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPS 394 (420)
Q Consensus 315 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~ 394 (420)
..++.....+.-++.|.+.+. .........+..|+++|+++.++.+....+|..+++.+.+.+.+.. +|+..|.+.+
T Consensus 75 -~~~~~~~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~-gWr~~f~~~~ 151 (368)
T TIGR00903 75 -DPFNYEWLLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAG-GLQLLIIPIA 151 (368)
T ss_pred -HhccHHHHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-chHHHHHHHH
Confidence 112344445555777877774 4444455567789999999999999999999999999999998875 8999888877
Q ss_pred HHHHHHHHHHhhhccCC
Q 014698 395 IFFYLTGTIVWLAFASS 411 (420)
Q Consensus 395 ~~~~~~~~~~~~~~~~~ 411 (420)
++.++..++.+...+++
T Consensus 152 ~l~~~~~~~~~~~lp~~ 168 (368)
T TIGR00903 152 AVAAAGIILVLAALPAL 168 (368)
T ss_pred HHHHHHHHHHHHHcCCC
Confidence 76666666555555543
No 154
>TIGR00895 2A0115 benzoate transport.
Probab=99.35 E-value=3.3e-11 Score=111.34 Aligned_cols=170 Identities=12% Similarity=0.078 Sum_probs=120.3
Q ss_pred HHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHH
Q 014698 229 AHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAV 308 (420)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
..+.............|.+.+ ++|.++.+.+++.+...++..++.++.|++.||+|+| .....+.....+
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~---------~~~~~~~~~~~~ 94 (398)
T TIGR00895 25 IMLMDGYDLAAMGFAAPAISA-EWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRK---------RVLLWSILLFSV 94 (398)
T ss_pred HHHHHHHHHHHHHhhHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhH---------HHHHHHHHHHHH
Confidence 333333344444556666655 4799999999999999999999999999999999953 333333333333
Q ss_pred HHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceee
Q 014698 309 CMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSM 388 (420)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~ 388 (420)
...+..... +.....+..++.|++.+...+.......+..|+++|+++.++.+....+|..++|.+.+.+.+.. +++.
T Consensus 95 ~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-g~~~ 172 (398)
T TIGR00895 95 FTLLCALAT-NVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVF-GWRS 172 (398)
T ss_pred HHHHHHHcc-chHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcc-ccee
Confidence 333333332 34444555577788777777777777777788899999999999999999999999999999886 7888
Q ss_pred eehhhhHHHHHHHHHHhhhccC
Q 014698 389 SLFAPSIFFYLTGTIVWLAFAS 410 (420)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~ 410 (420)
.+.+.++...+...+.+...++
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~ 194 (398)
T TIGR00895 173 LFYVGGIAPLLLLLLLMRFLPE 194 (398)
T ss_pred ehhhhhhHHHHHHHHHHHhCCC
Confidence 8887755555554444444443
No 155
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.35 E-value=9.4e-11 Score=107.53 Aligned_cols=152 Identities=11% Similarity=-0.040 Sum_probs=117.4
Q ss_pred cHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHH
Q 014698 220 SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQ 299 (420)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~ 299 (420)
++.++......++...........+|.+.++ +|.|..+.|+..+...++..+++++.|+++||+|+| ...
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k---------~~~ 74 (381)
T PRK03633 5 TRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQ-EHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFN---------RSY 74 (381)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH---------HHH
Confidence 4567778888888888888888999999986 599999999999999999999999999999999964 333
Q ss_pred HHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHH
Q 014698 300 TIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYL 379 (420)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l 379 (420)
..+..............+ +.....+..++.|++.+...+.......+..++++|+++.+..+...++|..++|.+.+.+
T Consensus 75 ~~~~~~~~~~~~~~~~~~-~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l 153 (381)
T PRK03633 75 YLASLIFAAGCAGLGLMV-GFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKV 153 (381)
T ss_pred HHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 334444343333333332 3444555557778877766555555666778889999999999999999999999999988
Q ss_pred hcc
Q 014698 380 LDS 382 (420)
Q Consensus 380 ~~~ 382 (420)
.+.
T Consensus 154 ~~~ 156 (381)
T PRK03633 154 STE 156 (381)
T ss_pred ccc
Confidence 765
No 156
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.34 E-value=1.3e-11 Score=115.32 Aligned_cols=180 Identities=12% Similarity=0.045 Sum_probs=117.9
Q ss_pred cHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHH
Q 014698 220 SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQ 299 (420)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~ 299 (420)
++.++...+................| ++++. |.++.+.++..+...++..++.++.|+++||+|+| +. .
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~-g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~--------~~-~ 94 (438)
T TIGR00712 26 WQVFLGIFFGYAAYYLVRKNFALAMP-YLVEQ-GFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPR--------VF-L 94 (438)
T ss_pred HHHHHHHHHHHHHHHHHhccHHhhhH-HHHHc-CCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCc--------ee-h
Confidence 33344444444443333333444555 45554 99999999999999999999999999999999975 22 2
Q ss_pred HHHHHHhHHHHHHHhhcC---CCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHH
Q 014698 300 TIAFLSPAVCMTLSSIDL---GLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALT 376 (420)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~ 376 (420)
..+.....+........+ ++.....+..++.|++.+...+.....+.+.+|+++|+++.|+.+....+++.++|.+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~ 174 (438)
T TIGR00712 95 PAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLV 174 (438)
T ss_pred HHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHH
Confidence 223333333322222211 11222333345667776665565666667778999999999999999999999999988
Q ss_pred HHHhccCCceeeeehhhhHHHHHHHHHHhhhccC
Q 014698 377 GYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFAS 410 (420)
Q Consensus 377 g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (420)
+...+...+|+..|++.+++.++..+..+...++
T Consensus 175 ~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~ 208 (438)
T TIGR00712 175 LLGMAWFNDWHAALYFPAICAIIVALFAFAMMRD 208 (438)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccC
Confidence 8766544578888888777666655555554443
No 157
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.34 E-value=5.6e-11 Score=109.65 Aligned_cols=177 Identities=8% Similarity=-0.036 Sum_probs=117.8
Q ss_pred HHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHH
Q 014698 223 VWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIA 302 (420)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 302 (420)
.+.......+...........+|.+.++ +|.|+.+.++..+...++..++.++.|+++||+||| + . +..+
T Consensus 10 l~~~~~~~~~~~~~~~~~~p~~~~i~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr-------~-~-~~~~ 79 (394)
T PRK11652 10 LFMLVLLVAVGQMAQTIYVPAIADMARD-LNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRR-------P-V-ILVG 79 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCCh-------H-H-HHHH
Confidence 3334444444444444455566766654 699999999999999999999999999999999974 2 2 2223
Q ss_pred HHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhcc
Q 014698 303 FLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDS 382 (420)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 382 (420)
.....+........ ++.....+..++.|++.+...+.......+..++++++.+.+..+....++..++|.+.+.+.+.
T Consensus 80 ~~~~~~~~~~~~~~-~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~ 158 (394)
T PRK11652 80 MSIFILGTLVALFA-HSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTL 158 (394)
T ss_pred HHHHHHHHHHHHHH-ccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 33333333333332 22344444456667766654444444555567778899999999999999999999999999887
Q ss_pred CCceeeeehhhhHHHHHHHHHHhhhccCC
Q 014698 383 THSWSMSLFAPSIFFYLTGTIVWLAFASS 411 (420)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (420)
. +|+..|.+.++...+.........+++
T Consensus 159 ~-g~~~~f~~~~~~~~~~~~~~~~~~~~~ 186 (394)
T PRK11652 159 F-GWRACYLFLLLLGAGVTFSMARWMPET 186 (394)
T ss_pred c-ChHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 5 688888876665554444444444443
No 158
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.32 E-value=9.4e-11 Score=110.47 Aligned_cols=162 Identities=16% Similarity=0.192 Sum_probs=106.0
Q ss_pred HHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHh
Q 014698 235 WGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSS 314 (420)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (420)
...+......|.+ ++++|.+..+.++..+...++..++.++.|+++||+|+| +. ...+.+...+...+..
T Consensus 50 ~~~~~~~~~~~~l-~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r--------~~-~~~~~~~~~~~~~~~~ 119 (476)
T PLN00028 50 VSTFAAAPLLPII-RDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPR--------YG-SAFLLMLTAPAVFCMS 119 (476)
T ss_pred HHHHHHHHHHHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh--------HH-HHHHHHHHHHHHHHHH
Confidence 3333444445544 556799999999998888899999999999999999974 22 2333333333333333
Q ss_pred hcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhc----c----CCce
Q 014698 315 IDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLD----S----THSW 386 (420)
Q Consensus 315 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~----~----~~~~ 386 (420)
... +.....+..++.|++.+... +....+.+.+|+++||++.|+.+...++|+.+++.+.+.+.+ . ..+|
T Consensus 120 ~~~-s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gW 197 (476)
T PLN00028 120 LVS-SATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAW 197 (476)
T ss_pred Hhc-CHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhh
Confidence 332 23333344466676665432 333445666888999999999998888888888777765532 1 1268
Q ss_pred eeeehhhhHHHHHHHHHHhhhc
Q 014698 387 SMSLFAPSIFFYLTGTIVWLAF 408 (420)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~ 408 (420)
+..|++.+++.++..+..+.+.
T Consensus 198 r~~f~i~g~l~l~~~l~~~~~~ 219 (476)
T PLN00028 198 RIAFFVPGLLHIIMGILVLTLG 219 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHc
Confidence 8888888776666555554443
No 159
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.32 E-value=1.2e-10 Score=107.29 Aligned_cols=181 Identities=11% Similarity=0.073 Sum_probs=112.4
Q ss_pred cHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHH-HHHHHHHhhhhhhhhhhhcCcchHHHHHHH
Q 014698 220 SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPL-ASVLVTSIAAQFADNLIATGVETTMVRKIC 298 (420)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~ 298 (420)
|.+.+...+..++...+.......+|.|+++++|.|+.+.|+..+...+ +...+.+.+++ .||+|+| |..+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r-------~~~~ 85 (393)
T PRK15011 14 DLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDR-------KSLI 85 (393)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-Hhcccch-------hHHH
Confidence 5666777777888888888888999999998899999999998766555 44455555555 9999975 3333
Q ss_pred HHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccch--HHHHHHHHHhhhhhHHHHHHHH
Q 014698 299 QTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYA--SILLGITNTVGAVPGIVGVALT 376 (420)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--g~~~g~~~~~~~~g~~~~~~~~ 376 (420)
.. +.....+......... +.....+...+.+.......+.......+..+++.| +...+..+....+|..++|.+.
T Consensus 86 ~~-~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~ 163 (393)
T PRK15011 86 VF-CCLLGVLACTLFAWNR-NYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLA 163 (393)
T ss_pred HH-HHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHH
Confidence 22 2222222222222221 122222222223333332333333333333444433 3445788888899999999999
Q ss_pred HHHhccCCceeeeehhhhHHHHHHHHHHhhhccCC
Q 014698 377 GYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASS 411 (420)
Q Consensus 377 g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (420)
+.+.++. +|+..|+..+...++..+..+...++.
T Consensus 164 ~~l~~~~-gw~~~f~~~~~~~~~~~~~~~~~~~~~ 197 (393)
T PRK15011 164 YALAMGF-SFTVMYLSAAVAFIVCGVMVWLFLPSM 197 (393)
T ss_pred HHHHHhc-ChHHHHHHHHHHHHHHHHHHHhhcCcc
Confidence 9999886 899888887766665555555444443
No 160
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.32 E-value=2.3e-11 Score=112.26 Aligned_cols=160 Identities=15% Similarity=0.102 Sum_probs=116.4
Q ss_pred HHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcC
Q 014698 238 YTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDL 317 (420)
Q Consensus 238 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (420)
.......|. +++++|.+..+.+++.+...++..++.++.|++.||+|||+ . ...+.....+.........
T Consensus 11 ~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~--------~-~~~~~~~~~~~~~~~~~~~ 80 (399)
T TIGR00893 11 ANLSFAAPM-LQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARK--------T-LAVFIVIWGVFTGLQAFAG 80 (399)
T ss_pred HhhhHhHHH-HHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcce--------e-eHHHHHHHHHHHHHHHHHc
Confidence 333444455 55668999999999999999999999999999999999752 2 2223323233222222222
Q ss_pred CCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHH
Q 014698 318 GLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFF 397 (420)
Q Consensus 318 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~ 397 (420)
+.....+..++.|++.+...+.......+..|+++|+++.++.+....+|..++|.+.+.+.+.. +++..|...++..
T Consensus 81 -~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~~~~~~~~~~~~~ 158 (399)
T TIGR00893 81 -AYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHF-SWQWAFIIEGVLG 158 (399)
T ss_pred -CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhC-CchHHHHHHHHHH
Confidence 34455555677888888777777777777789999999999999999999999999999998886 6888888776665
Q ss_pred HHHHHHHhhhcc
Q 014698 398 YLTGTIVWLAFA 409 (420)
Q Consensus 398 ~~~~~~~~~~~~ 409 (420)
++..+..+...+
T Consensus 159 ~~~~~~~~~~~~ 170 (399)
T TIGR00893 159 IIWGVLWLKFIP 170 (399)
T ss_pred HHHHHHhhheec
Confidence 555554444443
No 161
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.32 E-value=1e-10 Score=107.22 Aligned_cols=150 Identities=11% Similarity=0.003 Sum_probs=99.7
Q ss_pred cHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHH
Q 014698 220 SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQ 299 (420)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~ 299 (420)
+|.++...+.........+......+.+-++.+|+|..|.+++.+...+...+.++..|++.||+|.| +...
T Consensus 33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R--------~v~~ 104 (462)
T PRK15034 33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGR--------RWTV 104 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh--------HHHH
Confidence 45666666555555555555555556555556899999999999999999999999999999999974 3333
Q ss_pred HHHHHHhHHHHHHHhhc----CCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHH
Q 014698 300 TIAFLSPAVCMTLSSID----LGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVAL 375 (420)
Q Consensus 300 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~ 375 (420)
....+. .+........ .++.....+.-++.|++ +.........+.+.+|+++||++.|+.....++|..+++.+
T Consensus 105 ~~~ll~-~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l 182 (462)
T PRK15034 105 FSTAIL-IIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLV 182 (462)
T ss_pred HHHHHH-HHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHH
Confidence 222222 2222222221 12233444445677776 44556666666677899999999999977777777766665
Q ss_pred HHHH
Q 014698 376 TGYL 379 (420)
Q Consensus 376 ~g~l 379 (420)
.+.+
T Consensus 183 ~p~~ 186 (462)
T PRK15034 183 APLV 186 (462)
T ss_pred HHHH
Confidence 5543
No 162
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.31 E-value=9.1e-11 Score=108.74 Aligned_cols=174 Identities=10% Similarity=0.075 Sum_probs=121.1
Q ss_pred HHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHH
Q 014698 225 AMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFL 304 (420)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 304 (420)
...+..+.............|.+.++ +|.++.+.++..+...++..++.++.|++.||+|+| + ... .+..
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r-------~-~~~-~~~~ 88 (406)
T PRK11551 19 LCFLVALLEGLDLQSAGVAAPRMAQE-FGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRK-------R-ILI-VSVA 88 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-------h-hHH-HHHH
Confidence 33444444455555556666766655 799999999999999999999999999999999975 2 222 2222
Q ss_pred HhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCC
Q 014698 305 SPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTH 384 (420)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~ 384 (420)
...+........ ++.....+..++.|++.+...+.......+.+|+++|+++.++.+....+|..+++.+.+.+.+..
T Consensus 89 ~~~~~~~~~~~~-~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~- 166 (406)
T PRK11551 89 LFGLFSLATAQA-WDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDA- 166 (406)
T ss_pred HHHHHHHHHHHh-ccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc-
Confidence 222322222232 234445555577788877666666677778889999999999999999999999999988887765
Q ss_pred ceeeeehhhhHHHHHHHHHHhhhccC
Q 014698 385 SWSMSLFAPSIFFYLTGTIVWLAFAS 410 (420)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (420)
+|+..+++.+++.++.........++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~l~~ 192 (406)
T PRK11551 167 AWRHIFYVGGVGPLLLVPLLMRWLPE 192 (406)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 67777777665444444444443443
No 163
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.31 E-value=4e-11 Score=110.21 Aligned_cols=158 Identities=16% Similarity=0.136 Sum_probs=113.3
Q ss_pred cHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHH
Q 014698 220 SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQ 299 (420)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~ 299 (420)
+|+++.+.+..++...+........+...+ +++.++.+.+++.+...++..+..++.|++.||++|| |..
T Consensus 2 ~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr-------~vl-- 71 (393)
T PRK11195 2 SKGFYAIMAAQFFSALADNALLFAAIALLK-ELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKG-------RVM-- 71 (393)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCc-------hhh--
Confidence 456677777777777766555565666654 4688888999999999999999999999999999976 222
Q ss_pred HHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHH
Q 014698 300 TIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYL 379 (420)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l 379 (420)
..+.....+......... .. .+.-++.|++.+...+.....+.+.+|+|+|++++|+.+....++..+||.++|.+
T Consensus 72 ~~~~~~~~~~~~~~~~~~--~~--~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l 147 (393)
T PRK11195 72 FIANGIKLLGCLLMLFGI--HP--LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGAL 147 (393)
T ss_pred HHHHHHHHHHHHHHHHHH--HH--HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222222222111111111 11 33345678888878888888888889999999999999999999999999999999
Q ss_pred hccCCceeeeehhh
Q 014698 380 LDSTHSWSMSLFAP 393 (420)
Q Consensus 380 ~~~~~~~~~~~~~~ 393 (420)
.+.. +...+.+.
T Consensus 148 ~~~~--~~~~~~i~ 159 (393)
T PRK11195 148 ADPH--AEAALAVC 159 (393)
T ss_pred HHHH--HHHHHHHH
Confidence 9863 44444443
No 164
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.31 E-value=5.2e-11 Score=109.19 Aligned_cols=162 Identities=14% Similarity=0.080 Sum_probs=117.9
Q ss_pred HHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhc
Q 014698 237 HYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSID 316 (420)
Q Consensus 237 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (420)
.......+|.+.++ +|.++.+.++..+...++..++.++.|++.||+||| ..+..+.....+........
T Consensus 7 ~~~~~p~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~---------~~~~~~~~~~~i~~~~~~~~ 76 (377)
T PRK11102 7 IDMYLPALPVIAAD-FGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRK---------PVILGGTLVFALAAVACALA 76 (377)
T ss_pred HHHHhccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCCh---------HHHHHHHHHHHHHHHHHHHH
Confidence 34455677887776 699999999999999999999999999999999964 23333333333333333333
Q ss_pred CCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHH
Q 014698 317 LGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIF 396 (420)
Q Consensus 317 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~ 396 (420)
. +.....+..++.|++.+...+.......+..|+++|+++.++.+....+|..++|.+.+.+.+.. +++..+...+..
T Consensus 77 ~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~~~~~~~~~~~~ 154 (377)
T PRK11102 77 Q-TIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWF-SWHAIFWVLALA 154 (377)
T ss_pred c-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-ChHHHHHHHHHH
Confidence 2 23444455567777777666666677777788899999999999999999999999999999875 687777776665
Q ss_pred HHHHHHHHhhhccC
Q 014698 397 FYLTGTIVWLAFAS 410 (420)
Q Consensus 397 ~~~~~~~~~~~~~~ 410 (420)
.++..+......++
T Consensus 155 ~~~~~~~~~~~~~~ 168 (377)
T PRK11102 155 AILAAALVFFFIPE 168 (377)
T ss_pred HHHHHHHHHHhCCc
Confidence 55555554444444
No 165
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.31 E-value=2.8e-11 Score=112.08 Aligned_cols=130 Identities=17% Similarity=0.233 Sum_probs=105.6
Q ss_pred HHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhc---hHHHHHHHHHHHHhccccchhhhHHHHHhcCCccccchh
Q 014698 49 LLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAG---FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRA 125 (420)
Q Consensus 49 ~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 125 (420)
.+.+..+.+.||+++|+++..+.++..++..+.....+ +++.+++.+++.|++.+...+....+++|++|+++|+++
T Consensus 266 ~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~ 345 (418)
T TIGR00889 266 FFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASA 345 (418)
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
Confidence 34666777799999999999999988887665543122 245677889999999988888889999999999999999
Q ss_pred hHHHH-hhhhhHHHHHHhhHHHhhhc------cchhHHHHHHHHHHHHHH-HHhhhcccCc
Q 014698 126 VSFVF-GGLSFGSVAGLLLAPPIIEN------LGWESVFYIFGLLGIAWF-SGFKILQEGE 178 (420)
Q Consensus 126 ~~~~~-~~~~~g~~~g~~l~~~l~~~------~gwr~~f~~~~~~~~~~~-~~~~~~~~~~ 178 (420)
+|+.+ ...++|..+||+++|.+.+. +||+..|.+.++..++.. +..++++|+.
T Consensus 346 ~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~ 406 (418)
T TIGR00889 346 QGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSH 406 (418)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 99997 67899999999999999987 469999999888877654 4555555553
No 166
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.30 E-value=5.3e-11 Score=109.84 Aligned_cols=176 Identities=16% Similarity=0.126 Sum_probs=114.8
Q ss_pred cHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHH
Q 014698 220 SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQ 299 (420)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~ 299 (420)
||.+|......++...+......++|.|+++++|.++.+.+...+...+...+++++.|+++||+||| +....
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr-------~~~~~ 73 (396)
T TIGR00882 1 NTNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLK-------KHLLW 73 (396)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-------HHHHH
Confidence 57888888889998888889999999999998999999999999999999999999999999999975 22222
Q ss_pred HHHHHHh-HHHHHHHhhcCC--C-cHH-HHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHH
Q 014698 300 TIAFLSP-AVCMTLSSIDLG--L-PHW-EIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVA 374 (420)
Q Consensus 300 ~~~~~~~-~~~~~~~~~~~~--~-~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~ 374 (420)
....... ..........+. . ... ..+..+..+.+.+...+.......+ .. ++++...|......++|..++|.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~-~~~~~~~g~~~~~~~~g~~~g~~ 151 (396)
T TIGR00882 74 IISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEK-VS-RNSNFEYGKARMFGCVGWALCAS 151 (396)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHH-hh-hhcccccchhhhhcccHHHHHHH
Confidence 1111111 111111111110 0 111 1112233444444333333333322 22 23445677788888999999999
Q ss_pred HHHHHhccCCceeeeehhhhHHHHHHHHHHhh
Q 014698 375 LTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWL 406 (420)
Q Consensus 375 ~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (420)
+.|.+.+. +++..|++.+...++..++.+.
T Consensus 152 ~~g~l~~~--~~~~~f~~~~~~~~~~~~~~~~ 181 (396)
T TIGR00882 152 IAGILFSI--DPQIVFWLGSGFALILMLLLMF 181 (396)
T ss_pred HHhhhhcc--CchHHHHHHHHHHHHHHHHHHH
Confidence 99988765 6777887776655555444433
No 167
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.30 E-value=9.6e-11 Score=108.51 Aligned_cols=164 Identities=10% Similarity=0.031 Sum_probs=118.4
Q ss_pred HHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHH
Q 014698 221 KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQT 300 (420)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 300 (420)
+.+....+..+...+.........|.+. +++|.+..+.++..+...++..++.++.|++.||+||| +. +.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r--------~~-~~ 81 (405)
T TIGR00891 12 NAFSAAWLGWLLDAFDFFLVALVLAEVA-GEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRR--------LP-MV 81 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccH--------HH-HH
Confidence 3344555566666666666666666654 55799999999999999999999999999999999964 22 23
Q ss_pred HHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHh
Q 014698 301 IAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLL 380 (420)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 380 (420)
.+.....+......... +........++.|++.+...+.......+..|+++|+++.++.+....+|..+++.+.+.+.
T Consensus 82 ~~~~~~~~~~~~~~~~~-~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~ 160 (405)
T TIGR00891 82 TSIVLFSAGTLACGFAP-GYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVV 160 (405)
T ss_pred HHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333333322 24444555577788877777777777778889999999999999999999999999999988
Q ss_pred ccCC-ceeeeehhhhH
Q 014698 381 DSTH-SWSMSLFAPSI 395 (420)
Q Consensus 381 ~~~~-~~~~~~~~~~~ 395 (420)
+..+ +|+..+.+.++
T Consensus 161 ~~~~~~w~~~f~~~~~ 176 (405)
T TIGR00891 161 PVWGDGWRALFFISIL 176 (405)
T ss_pred HhcCccHHHHHHHHHH
Confidence 7653 47767766443
No 168
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.30 E-value=2.1e-10 Score=106.17 Aligned_cols=160 Identities=10% Similarity=0.078 Sum_probs=111.8
Q ss_pred HhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCC
Q 014698 240 CLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGL 319 (420)
Q Consensus 240 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (420)
...-+|. +.+.++.+..+.++..+.+.++..+++++.|+++||+||| ..+..+.....++....... ++
T Consensus 35 ~~p~l~~-i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr---------~~l~~~~~~~~~~~~~~~~a-~~ 103 (413)
T PRK15403 35 IQPGIIN-VVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRR---------PVLITGALIFTLACAATLFT-TS 103 (413)
T ss_pred hccCHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCch---------HHHHHHHHHHHHHHHHHHHc-CC
Confidence 3334444 3456799999999999999999999999999999999974 23333333333333333333 23
Q ss_pred cHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHH
Q 014698 320 PHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYL 399 (420)
Q Consensus 320 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~ 399 (420)
.....+.-++.|++.+...........+.+|+++++++.++.+....++..++|.+++.+.+.. +|+..|++.++..++
T Consensus 104 ~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~-gw~~~f~~~~~~~~i 182 (413)
T PRK15403 104 MTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFV-HWKVLFAIIAVMGLI 182 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHH
Confidence 4444455566777665434334444555678888999999999999999999999999998875 788888887776666
Q ss_pred HHHHHhhhccCC
Q 014698 400 TGTIVWLAFASS 411 (420)
Q Consensus 400 ~~~~~~~~~~~~ 411 (420)
..+..+...+++
T Consensus 183 ~~~~~~~~lp~~ 194 (413)
T PRK15403 183 AFVGLLLAMPET 194 (413)
T ss_pred HHHHHHHhCCCC
Confidence 555444444543
No 169
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.30 E-value=1.9e-10 Score=106.58 Aligned_cols=163 Identities=8% Similarity=0.030 Sum_probs=112.6
Q ss_pred HHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhc
Q 014698 237 HYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSID 316 (420)
Q Consensus 237 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (420)
...+...+|.+. +++|.++.+.++..+...++..++.++.|.++||+||| +. +..+.....++.......
T Consensus 29 ~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r--------~~-l~~~~~~~~~~~~~~~~~ 98 (406)
T PRK15402 29 NDMIQPGMLAVV-EDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRR--------PV-MLAGVAFFILTCLAILLA 98 (406)
T ss_pred hhhHhcchHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh--------HH-HHHHHHHHHHHHHHHHHH
Confidence 333444556554 45799999999999999999999999999999999974 22 223333333333333332
Q ss_pred CCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHH
Q 014698 317 LGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIF 396 (420)
Q Consensus 317 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~ 396 (420)
. +........++.|.+.+...+.......+.+|+++++++.++......++..++|.+.+.+.+.. +|+..+++.+++
T Consensus 99 ~-~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~-~w~~~~~~~~~~ 176 (406)
T PRK15402 99 Q-SIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVL-PWRGMFVLFAAL 176 (406)
T ss_pred c-cHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CccHHHHHHHHH
Confidence 2 23344444466676666555555566667788899999999998888899999999999998875 788888887766
Q ss_pred HHHHHHHHhhhccCC
Q 014698 397 FYLTGTIVWLAFASS 411 (420)
Q Consensus 397 ~~~~~~~~~~~~~~~ 411 (420)
.+++....+...+++
T Consensus 177 ~~~~~~~~~~~~~~~ 191 (406)
T PRK15402 177 AALSFFGLWRAMPET 191 (406)
T ss_pred HHHHHHHHHHhCCCC
Confidence 665555444444443
No 170
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.30 E-value=2e-10 Score=105.88 Aligned_cols=149 Identities=13% Similarity=0.034 Sum_probs=108.0
Q ss_pred HHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHH
Q 014698 223 VWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIA 302 (420)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 302 (420)
++......+...+.........|.+ ++++|.+..+.|++.+...++..++++..|++.||+|+| .....+
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~-~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r---------~~~~~g 74 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQF-QQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYK---------AGILLG 74 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch---------HHHHHH
Confidence 4444555555555554445566665 667899999999999999999999999999999999964 333344
Q ss_pred HHHhHHHHHHHhh-c-CCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHh
Q 014698 303 FLSPAVCMTLSSI-D-LGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLL 380 (420)
Q Consensus 303 ~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 380 (420)
....++...+... . .++........++.|.+.+...........+..|++++++..++.+...++|..++|.+.+.+.
T Consensus 75 ~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~ 154 (410)
T TIGR00885 75 LFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLI 154 (410)
T ss_pred HHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4443333333221 1 2223444555677888888777777777767778889999999999999999999999999886
Q ss_pred c
Q 014698 381 D 381 (420)
Q Consensus 381 ~ 381 (420)
.
T Consensus 155 ~ 155 (410)
T TIGR00885 155 L 155 (410)
T ss_pred h
Confidence 3
No 171
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.30 E-value=8.4e-11 Score=110.33 Aligned_cols=157 Identities=12% Similarity=0.028 Sum_probs=102.9
Q ss_pred hhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhc---C
Q 014698 241 LSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSID---L 317 (420)
Q Consensus 241 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 317 (420)
....| ++++. |.+..+.++..+...++..+++++.|+++||+|+| + .+..+....++........ .
T Consensus 49 ~~~~p-~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k--------~-~l~~~~~~~~i~~~~~~~~~~~~ 117 (452)
T PRK11273 49 ALAMP-YLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPR--------V-FLPAGLILAAAVMLFMGFVPWAT 117 (452)
T ss_pred HHhhH-HHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCc--------h-hHHHHHHHHHHHHHHHHhhhccc
Confidence 34555 45566 99999999999999999999999999999999975 2 2333333333332222221 1
Q ss_pred CCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHH-HHHhccCCceeeeehhhhHH
Q 014698 318 GLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALT-GYLLDSTHSWSMSLFAPSIF 396 (420)
Q Consensus 318 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~-g~l~~~~~~~~~~~~~~~~~ 396 (420)
.+.....+..++.|++.+...+.......+.+|+++|+++.|+.+....+|+.+.+.+. ..+... .+|+..|++.++.
T Consensus 118 ~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~-~gw~~~f~i~~~~ 196 (452)
T PRK11273 118 SSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWF-NDWHAALYMPAFA 196 (452)
T ss_pred ccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHh-ccHHHHHHHHHHH
Confidence 12233344446677777765555556666778999999999999999988875544443 333322 4788888877665
Q ss_pred HHHHHHHHhhhcc
Q 014698 397 FYLTGTIVWLAFA 409 (420)
Q Consensus 397 ~~~~~~~~~~~~~ 409 (420)
.++..++.++..+
T Consensus 197 ~~~~~~l~~~~~~ 209 (452)
T PRK11273 197 AILVALFAFAMMR 209 (452)
T ss_pred HHHHHHHHHHHcc
Confidence 5555554444444
No 172
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.28 E-value=3.6e-09 Score=94.32 Aligned_cols=307 Identities=14% Similarity=0.057 Sum_probs=192.5
Q ss_pred hhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCccccchhhHHHH
Q 014698 51 ELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVF 130 (420)
Q Consensus 51 ~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~ 130 (420)
.+....+.|..+.|++++++.+...+...+.-+ .++...+-+..+.-|++.+. ..+.++++=...|+++-.++.+...
T Consensus 58 l~~vflltd~l~Ykpviil~~~~~i~t~~lll~-~~sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~r 135 (412)
T PF01770_consen 58 LLPVFLLTDYLRYKPVIILQALSYIITWLLLLF-GTSVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTR 135 (412)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHH-HCcHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHH
Confidence 334444467777888888888887777776655 89999999999999999665 5667899988899999999999999
Q ss_pred hhhhhHHHHHHhhHHHhhhc--cchhHHHHHHHHHHHHHHHHhhhcccCcccC---CCCcCcc-----chhhhhhhhhhh
Q 014698 131 GGLSFGSVAGLLLAPPIIEN--LGWESVFYIFGLLGIAWFSGFKILQEGETSN---GATLAPR-----SNYINMKKSLSA 200 (420)
Q Consensus 131 ~~~~~g~~~g~~l~~~l~~~--~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-----~~~~~~~~~~~~ 200 (420)
+...+|..++..+|-.+... .+.+...++......+..+..+++|..++.. ++...+. +.+...+.+..+
T Consensus 136 aa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP~~~~S~~f~r~~~~~~~~~~~~~~~~~~~~~~~ 215 (412)
T PF01770_consen 136 AATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLPMPKRSLFFHRKPPAEQDANESESDKMNESPESS 215 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCCCCcccceeccCccccccccccccccccccccc
Confidence 99999999999999877763 3455666665555555666667788765421 1110000 000000000000
Q ss_pred --hhhhh--ccc-------ccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhh--hCCCcchhhHHHHhhH
Q 014698 201 --SLEEM--GES-------LKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEE--LSLNLTEAAWVSILPP 267 (420)
Q Consensus 201 --~~~~~--~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~ 267 (420)
..++. .+. .-..++++..++|.++.-.+-+.+...+++.+.+|.....++. -+-+....|.+-+...
T Consensus 216 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atcgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~t 295 (412)
T PF01770_consen 216 SSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATCGYYQVINYVQSLWDTVPPSDNESVYNGAVEAAST 295 (412)
T ss_pred cccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHH
Confidence 00000 000 0112345666788888888888888888888888777776654 1233344577778888
Q ss_pred HHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhh
Q 014698 268 LASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQ 347 (420)
Q Consensus 268 ~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 347 (420)
+.+.++.+..|++..++.+. ....+.......+.++++... .++.+...+..++++..+.........-+..
T Consensus 296 llgA~~al~~g~v~~~w~~~-------~~l~l~~~S~l~a~~L~lm~~-t~~Iwv~Y~~yIif~~~y~fliTiA~~qIA~ 367 (412)
T PF01770_consen 296 LLGAIAALLAGYVKVNWDRW-------GELALGVFSLLQAGLLFLMSF-TGNIWVCYAGYIIFRSLYMFLITIASFQIAK 367 (412)
T ss_pred HHHHHHHHHHhHhhcchHHH-------HHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888885555432 233333333333333333333 2224444445555565555455555555556
Q ss_pred ccCccchHHHHHHHHHhhhh
Q 014698 348 DISPEYASILLGITNTVGAV 367 (420)
Q Consensus 348 ~~~~~~~g~~~g~~~~~~~~ 367 (420)
....|.-|..+|+.++..-+
T Consensus 368 ~l~~e~yaLVFGiNtf~Al~ 387 (412)
T PF01770_consen 368 NLSEERYALVFGINTFVALV 387 (412)
T ss_pred hccccceeeeeeeHHHHHHH
Confidence 67778888888887765443
No 173
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.27 E-value=1.2e-10 Score=109.46 Aligned_cols=179 Identities=16% Similarity=0.143 Sum_probs=133.0
Q ss_pred hhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHH
Q 014698 216 AIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVR 295 (420)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~ 295 (420)
.-+|||.+..+.....+.+.+......-.+-++.+. .-|+...+++.....+..++.++++|.+.||+.||
T Consensus 5 aplr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~l-t~S~~~valv~~a~~LP~~Llsl~aG~laDr~drr-------- 75 (524)
T PF05977_consen 5 APLRNRNFRRLWIAQLISNLGDWMQTVALAWLVTQL-TGSPLMVALVQAASTLPILLLSLFAGALADRFDRR-------- 75 (524)
T ss_pred ccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccch--------
Confidence 457799999999999998888888777777776654 67888999999999999999999999999999875
Q ss_pred HHHHHHHHHHhHH--HH-HHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHH
Q 014698 296 KICQTIAFLSPAV--CM-TLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVG 372 (420)
Q Consensus 296 ~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~ 372 (420)
+.++..-.+.... .+ .+......+.+..++..++.|++.....+.....+.+.+|+++...++++.+...++...+|
T Consensus 76 rili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iG 155 (524)
T PF05977_consen 76 RILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIG 155 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhcc
Confidence 3333222222211 11 12222222344455556788888887777777888888999999999999999999999999
Q ss_pred HHHHHHHhccCCceeeeehhhhHHHHHHHHHH
Q 014698 373 VALTGYLLDSTHSWSMSLFAPSIFFYLTGTIV 404 (420)
Q Consensus 373 ~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (420)
|.++|.++... +....|.+-++..++....+
T Consensus 156 PalgG~Lva~~-G~~~~f~inalsfl~~i~~l 186 (524)
T PF05977_consen 156 PALGGILVAFF-GAAAAFLINALSFLISILAL 186 (524)
T ss_pred chHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 99999999876 56667777666555444333
No 174
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.27 E-value=1.5e-10 Score=112.67 Aligned_cols=131 Identities=13% Similarity=0.044 Sum_probs=97.1
Q ss_pred hhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCc
Q 014698 241 LSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLP 320 (420)
Q Consensus 241 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (420)
...+|.+ ++.+|.+..+.+++.+...++.+++.+++|+++||+||| +.+ ..+.++..++.++..... +.
T Consensus 187 s~ilp~i-~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR--------~~l-ii~lil~~i~~ll~afa~-s~ 255 (742)
T TIGR01299 187 GFVLPSA-EKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRK--------QCL-LICLSVNGFFAFFSSFVQ-GY 255 (742)
T ss_pred HHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH--------HHH-HHHHHHHHHHHHHHHHHh-hH
Confidence 3344544 445799999999999999999999999999999999974 222 233333333333333322 24
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhcc
Q 014698 321 HWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDS 382 (420)
Q Consensus 321 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 382 (420)
..+++.-++.|++.+...+.....+.+..|++.|++..++.+....+|.++++.+...+...
T Consensus 256 ~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~ 317 (742)
T TIGR01299 256 GFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPH 317 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44555567888888888877778888888999999999999999999999999887776643
No 175
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.26 E-value=3e-09 Score=92.20 Aligned_cols=230 Identities=16% Similarity=0.098 Sum_probs=150.7
Q ss_pred hhhhccccccchhhhhHHhHH---hhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccch
Q 014698 30 KWVGLRIGRRGRIYLKDTNLL---ELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSP 106 (420)
Q Consensus 30 ~~l~~~~g~~~~l~~~~~~~~---~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~ 106 (420)
..-+-..+++..++..++... +.+.+.+.|++||||..+.-+++.++.++.. ..++++.++++|++.|++.+..+
T Consensus 62 ~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k--~~~~~~~L~~GRvlgGiaTSLLf 139 (354)
T PF05631_consen 62 ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTK--HSSNYPVLLLGRVLGGIATSLLF 139 (354)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH--hccccHHHHHHHHHHHHHHHHHH
Confidence 333444445566666555544 5556666999999999999999999998755 37999999999999999998888
Q ss_pred hhhHHH-HHhcC----CccccchhhHHHH-hhhhhHHHHHHhhHHHhhhccch--hHHHHHHHHHHHHHHHH-hhhcccC
Q 014698 107 SAATDL-IARSI----PLEERSRAVSFVF-GGLSFGSVAGLLLAPPIIENLGW--ESVFYIFGLLGIAWFSG-FKILQEG 177 (420)
Q Consensus 107 ~~~~~~-i~~~~----~~~~r~~~~~~~~-~~~~~g~~~g~~l~~~l~~~~gw--r~~f~~~~~~~~~~~~~-~~~~~~~ 177 (420)
.+--++ +.|.- |++..+..++... ..+++-.+.+..++.++.+..+. ..+|....+..++..+. ....+|+
T Consensus 140 S~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~EN 219 (354)
T PF05631_consen 140 SAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPEN 219 (354)
T ss_pred HHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhccccc
Confidence 776664 45543 3333344444333 33444556666677777776554 77888777766664433 3344555
Q ss_pred cccCCCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhh-hhhhHhhhhhCCCc
Q 014698 178 ETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLS-WLPTYFSEELSLNL 256 (420)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~ 256 (420)
..+..++ .+.. +.. ...++.+.+||+++.+.+...+.-...|.+.. |.|..-.+ -+.
T Consensus 220 yg~~~~~-~~~~----------~~~--------~~a~~~i~~d~ril~LG~~qslFE~smy~FVflWtPaL~~~---~~~ 277 (354)
T PF05631_consen 220 YGDTSSS-SSLS----------GSF--------REAWRAILSDPRILLLGLIQSLFEGSMYLFVFLWTPALDPD---DEE 277 (354)
T ss_pred CCCcccc-cchH----------HHH--------HHHHHHHHcCchhHHHHHHHHHHHHHHHHheeeeeceecCC---CCC
Confidence 4322111 1100 000 01145677799999999999999999888877 67766522 123
Q ss_pred chhhHHHHhhHHHHHHHHHhhhhhhhh
Q 014698 257 TEAAWVSILPPLASVLVTSIAAQFADN 283 (420)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~g~l~dr 283 (420)
.-.|++++...++.++|+.+..++..|
T Consensus 278 ~P~GlIFssFM~a~MlGS~lf~~l~s~ 304 (354)
T PF05631_consen 278 LPLGLIFSSFMVAMMLGSSLFSRLLSK 304 (354)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 347889999889999998887655544
No 176
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.25 E-value=2.6e-10 Score=108.60 Aligned_cols=160 Identities=11% Similarity=0.015 Sum_probs=115.5
Q ss_pred HHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHH
Q 014698 222 AVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTI 301 (420)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 301 (420)
.+....+..+...+.........|.+. +++|.++.+.++..+...++..++.++.|++.||+|+| + ....
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r--------~-~~~~ 90 (496)
T PRK03893 21 AFSAAWLGYLLDGFDFVLITLVLTEVQ-GEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRR--------L-AMVI 90 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH--------H-HHHH
Confidence 344445555555555555555666655 55799999999999999999999999999999999964 2 2333
Q ss_pred HHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhc
Q 014698 302 AFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLD 381 (420)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 381 (420)
+.....+......... +.....+..++.|++.+...........+.+|+++|+++.++.+....+|..++|.+.+.+.+
T Consensus 91 ~~~~~~~~~~~~~~~~-~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 169 (496)
T PRK03893 91 SIVLFSVGTLACGFAP-GYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVP 169 (496)
T ss_pred HHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3333333333333322 234445555777887776677777777788899999999999999999999999999999998
Q ss_pred cCCceeeeehhh
Q 014698 382 STHSWSMSLFAP 393 (420)
Q Consensus 382 ~~~~~~~~~~~~ 393 (420)
.. +|+..|.+.
T Consensus 170 ~~-~w~~~f~~~ 180 (496)
T PRK03893 170 VW-GWRALFFIG 180 (496)
T ss_pred cC-CHHHHHHHH
Confidence 75 788777653
No 177
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.24 E-value=1.3e-10 Score=110.21 Aligned_cols=134 Identities=9% Similarity=-0.027 Sum_probs=99.2
Q ss_pred HHhhhhcchhhhcchhHHHHHHHHHHHHHHHHH-H-HhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCccccchhh
Q 014698 49 LLELLRLPLLFVTWIRKVLQTGVLIWSLATALL-P-LLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAV 126 (420)
Q Consensus 49 ~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~-~-~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~ 126 (420)
++.++.+++.||++||+++..+.++..+..... . ..+++...+++++++.|++.+........++.|.+|++.|++++
T Consensus 301 ~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~ 380 (490)
T PRK10642 301 FVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSAL 380 (490)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHH
Confidence 345567788999999999888776544433321 1 11455677888999998877766677788899999999999999
Q ss_pred HHHHhhhhhHHHHHHhhHHHhhhcc-chhHHHHHHHHHHHHHHHHhhhcccCcccCC
Q 014698 127 SFVFGGLSFGSVAGLLLAPPIIENL-GWESVFYIFGLLGIAWFSGFKILQEGETSNG 182 (420)
Q Consensus 127 ~~~~~~~~~g~~~g~~l~~~l~~~~-gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (420)
+.......++..++|.+.+++.+.. +|+.+++...+.+++..+..+++||++++..
T Consensus 381 g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~pes~~~~~ 437 (490)
T PRK10642 381 AAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVTMKETANRPL 437 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccCCCC
Confidence 9755555666788899988888754 4787877777777776666777899877644
No 178
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.24 E-value=4.6e-11 Score=109.52 Aligned_cols=167 Identities=12% Similarity=0.005 Sum_probs=116.8
Q ss_pred HHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHH
Q 014698 231 FCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCM 310 (420)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (420)
++.......+....|. +++++|.+..+.+++.+...++..++.++.|+++||+|+| ..+..+.....+..
T Consensus 5 ~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r---------~~~~~~~~~~~~~~ 74 (379)
T TIGR00881 5 AAYYLVRKNFALAMPY-LVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPR---------VFLPIGLILCAIVN 74 (379)
T ss_pred hHHHHhHHhhhhhhHH-HHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCe---------ehhHHHHHHHHHHH
Confidence 3344445555556665 4556799999999999999999999999999999999975 22333333333333
Q ss_pred HHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHH-HHHHHhccCCceeee
Q 014698 311 TLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVA-LTGYLLDSTHSWSMS 389 (420)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~-~~g~l~~~~~~~~~~ 389 (420)
.+..... +.....+..++.|++.+...+.......+..|+++|+++.++.+....+|..++|. +.+.+.+. .+++..
T Consensus 75 ~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~ 152 (379)
T TIGR00881 75 LFFGFST-SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAEL-YSWHWV 152 (379)
T ss_pred HHHHHhh-hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhc-CCchhH
Confidence 3333332 24445555577788777677777777778889999999999999999999999994 55555555 478878
Q ss_pred ehhhhHHHHHHHHHHhhhcc
Q 014698 390 LFAPSIFFYLTGTIVWLAFA 409 (420)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~ 409 (420)
+.+.+++.++..+..+...+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~ 172 (379)
T TIGR00881 153 FIVPGIIAIIVSLICFLLLR 172 (379)
T ss_pred HHHHHHHHHHHHHHHheeeC
Confidence 87766655555554444443
No 179
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.24 E-value=2.3e-10 Score=106.80 Aligned_cols=161 Identities=9% Similarity=0.068 Sum_probs=115.3
Q ss_pred HHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHH
Q 014698 222 AVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTI 301 (420)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 301 (420)
.+....+..+.............|.+ ++++|.++.+.++..+...++..++.++.|+++||+|+| ..+..
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r---------~~l~~ 88 (426)
T PRK12307 19 ALFSAWLGYVFDGFDFMLIFYIMYLI-KADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRK---------PLMMW 88 (426)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh---------HHHHH
Confidence 34444445555445555554555544 456799999999999999999999999999999999964 33333
Q ss_pred HHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhc
Q 014698 302 AFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLD 381 (420)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 381 (420)
+.....+......... +.....+.-++.|++.+...+.......+..|+++|+++.++......+|..+++.+.+.+.+
T Consensus 89 ~~~~~~~~~~~~~~~~-~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~ 167 (426)
T PRK12307 89 SIVAYSVGTGLSGLAS-GVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAE 167 (426)
T ss_pred HHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcc
Confidence 4443333333333322 244445555777888777777777777788899999999999999999999999999998888
Q ss_pred cCCceeeeehhhh
Q 014698 382 STHSWSMSLFAPS 394 (420)
Q Consensus 382 ~~~~~~~~~~~~~ 394 (420)
.. +|+..+++..
T Consensus 168 ~~-~w~~~f~i~~ 179 (426)
T PRK12307 168 AY-GWRAAFFVGL 179 (426)
T ss_pred cC-CHHHHHHHHH
Confidence 75 7887776643
No 180
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.23 E-value=4.7e-10 Score=103.25 Aligned_cols=147 Identities=14% Similarity=0.159 Sum_probs=109.0
Q ss_pred HHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcC
Q 014698 238 YTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDL 317 (420)
Q Consensus 238 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (420)
......+|...+ ++|.|..+.++..+...++..++++..|++.||+|+| .....+....+++.......+
T Consensus 26 ~~~~~~lp~i~~-~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r---------~~l~~~~~l~~~~~~~~~~a~ 95 (393)
T PRK09705 26 TSVGPLLPQLRQ-ASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSER---------RSVAISLLLIAVGALMRELYP 95 (393)
T ss_pred hccchhHHHHHH-HhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCch---------HHHHHHHHHHHHHHHHHHHCc
Confidence 444556676554 5799999999999999999999999999999999964 444555555555555555444
Q ss_pred CCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHH
Q 014698 318 GLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIF 396 (420)
Q Consensus 318 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~ 396 (420)
+ .......-++.|++.+...........+.. +++|++++|..+.....|..+++.+.+.+.++..+|+..+...++.
T Consensus 96 ~-~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~ 172 (393)
T PRK09705 96 Q-SALLLSSALLGGVGIGIIQAVMPSVIKRRF-QQRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALP 172 (393)
T ss_pred c-hHHHHHHHHHHHhHHHHHhhhhhHHHHHHc-cccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 3 444555567788888866665555555555 4889999999999999999999999999988765677666554443
No 181
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.23 E-value=5.4e-10 Score=103.28 Aligned_cols=165 Identities=11% Similarity=0.037 Sum_probs=113.0
Q ss_pred HHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhh-----hhcCcchHHHHHHHHHHH
Q 014698 228 YAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNL-----IATGVETTMVRKICQTIA 302 (420)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----~~~~~~~~~~~~~~~~~~ 302 (420)
..++.+.........-+|.|++++ |+|.++.|++...... .+..++.|+++||+ ||| |+++....
T Consensus 6 ~l~~~~~~~~~~~~~~~~~~l~~~-g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~r-------r~~l~~~~ 75 (402)
T PRK11902 6 LLGFASGLPLALTSGTLQAWMTVE-GLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRR-------RGWLLLTQ 75 (402)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcc-------hhHHHHHH
Confidence 345555666666777999999986 9999999998655544 58889999999999 654 33333333
Q ss_pred HHHhHHHHHHHhhcCCCcHH-HHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhc
Q 014698 303 FLSPAVCMTLSSIDLGLPHW-EIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLD 381 (420)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 381 (420)
.........+.........+ .....++.+.......+.......+..|+|+|+++.++......+|..+++.+.+.+.+
T Consensus 76 ~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~ 155 (402)
T PRK11902 76 VGLAASIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLAD 155 (402)
T ss_pred HHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHh
Confidence 33322222222222222233 22233445555555556666677777889999999999999889999999999999988
Q ss_pred cCCceeeeehhhhHHHHHHHH
Q 014698 382 STHSWSMSLFAPSIFFYLTGT 402 (420)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~ 402 (420)
...+|+..|++.++..++...
T Consensus 156 ~~~gw~~~f~i~a~~~l~~~l 176 (402)
T PRK11902 156 RVLGWGNTYLLMAGLMLAGAL 176 (402)
T ss_pred cccCHHHHHHHHHHHHHHHHH
Confidence 645788888887765554433
No 182
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.23 E-value=1.3e-10 Score=106.35 Aligned_cols=161 Identities=12% Similarity=0.008 Sum_probs=108.2
Q ss_pred HHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhh
Q 014698 236 GHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSI 315 (420)
Q Consensus 236 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (420)
..+......|.+. +++|.+..+.++..+...++..+++++.|+++||+||| +. ...+.....+.......
T Consensus 18 ~~~~~~~~~~~~~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r-------~~--~~~~~~~~~~~~~~~~~ 87 (377)
T TIGR00890 18 YVYTWTLLAPPLG-RYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPR-------AV--AMLGGILYGLGFTFYAI 87 (377)
T ss_pred HHhhhhhHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCcc-------ch--hHHhHHHHHHHHHHHHH
Confidence 3444455555555 45799999999999999999999999999999999975 22 22333333333333333
Q ss_pred cCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhH
Q 014698 316 DLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSI 395 (420)
Q Consensus 316 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~ 395 (420)
.+ +.....+...+.|++.+...........+.. +++|+++.+.......+|..+++++.+.+.+.. +|+..|.+.++
T Consensus 88 ~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~f~~~~~ 164 (377)
T TIGR00890 88 AD-SLAALYLTYGLASAGVGIAYGIALNTAVKWF-PDKRGLASGIIIGGYGLGSFILSPLITSVINLE-GVPAAFIYMGI 164 (377)
T ss_pred HH-HHHHHHHHHHHHhHHHHHHHHhHHHHHHHHc-CcccHHHHHHHHHhcchhHhHHHHHHHHHHhcc-cHHHHHHHHHH
Confidence 22 2333344445667766654444444444434 578999999999999999988888888777764 78888888777
Q ss_pred HHHHHHHHHhhhcc
Q 014698 396 FFYLTGTIVWLAFA 409 (420)
Q Consensus 396 ~~~~~~~~~~~~~~ 409 (420)
..++.....+...+
T Consensus 165 ~~~~~~~~~~~~~~ 178 (377)
T TIGR00890 165 IFLLVIVLGAFLIG 178 (377)
T ss_pred HHHHHHHHHHHhee
Confidence 66665555554443
No 183
>PRK10133 L-fucose transporter; Provisional
Probab=99.22 E-value=1.3e-09 Score=101.43 Aligned_cols=149 Identities=11% Similarity=0.055 Sum_probs=107.2
Q ss_pred HHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHH
Q 014698 222 AVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTI 301 (420)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 301 (420)
.+....+..+...+.........|.+ ++.+|.|+.+.++..+...++..+++++.|++.||+|+| ..+..
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~p~i-~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r---------~~l~~ 96 (438)
T PRK10133 27 PFALLCSLFFLWAVANNLNDILLPQF-QQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYK---------AGIIT 96 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH---------HHHHH
Confidence 44455555666666666677788877 677899999999999999999999999999999999964 33334
Q ss_pred HHHHhHHHHHHHh--hcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHH
Q 014698 302 AFLSPAVCMTLSS--IDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYL 379 (420)
Q Consensus 302 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l 379 (420)
+.....+...+.. ...++.....+..++.|++.+.........+.+..++++++...+..+....+|..++|.+++.+
T Consensus 97 g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l 176 (438)
T PRK10133 97 GLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSL 176 (438)
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444433321 12233445555668888888877777777666544445555689999999999999999988766
Q ss_pred h
Q 014698 380 L 380 (420)
Q Consensus 380 ~ 380 (420)
.
T Consensus 177 ~ 177 (438)
T PRK10133 177 I 177 (438)
T ss_pred H
Confidence 5
No 184
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.21 E-value=4.4e-10 Score=105.38 Aligned_cols=154 Identities=14% Similarity=0.079 Sum_probs=104.6
Q ss_pred HhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCC
Q 014698 240 CLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGL 319 (420)
Q Consensus 240 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (420)
...+.|.+.+ .+|.+..+.++..+...+...++.++.|+++||+++| + .+..+...............+
T Consensus 38 ~~~~~~~i~~-~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r-------~--~l~~~~~~~~~~~~~~~~~~~- 106 (455)
T TIGR00892 38 VTVFFKELQQ-IFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCR-------P--VVIAGGLLASLGMILASFSSN- 106 (455)
T ss_pred hhhhHHHHHH-HhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCch-------H--HHHhhHHHHHHHHHHHHHhhh-
Confidence 3445666555 5799999999999998888889999999999999974 2 222333333333333323222
Q ss_pred cHHHHHHH-HHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHH
Q 014698 320 PHWEIVGI-LTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFY 398 (420)
Q Consensus 320 ~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~ 398 (420)
........ ++.|++.+...++......+.+ +++|+++.|+.+....+|..++|.+.+.+.+.. +|+..|++.+++.+
T Consensus 107 ~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~-~~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~-gwr~~f~~~~~~~~ 184 (455)
T TIGR00892 107 VIELYLTAGFITGLGLAFNFQPSLTMLGKYF-YRRRPLANGLAMAGSPVFLSTLAPLNQYLFESF-GWRGSFLILGGLLL 184 (455)
T ss_pred HHHHHHHHHHHHHhcchhhhhHHHHHHHHHH-HhhHHHHHHHHHhcccHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHH
Confidence 22222222 4556666644444444444445 578999999999999999999999999999886 79999988877665
Q ss_pred HHHHHHhh
Q 014698 399 LTGTIVWL 406 (420)
Q Consensus 399 ~~~~~~~~ 406 (420)
++.+..++
T Consensus 185 ~~~v~~~~ 192 (455)
T TIGR00892 185 HCCVCGAL 192 (455)
T ss_pred HHHHHHHH
Confidence 55444333
No 185
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.21 E-value=3.6e-11 Score=106.34 Aligned_cols=182 Identities=11% Similarity=0.101 Sum_probs=137.2
Q ss_pred HHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHH
Q 014698 222 AVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTI 301 (420)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 301 (420)
....+.+.......--+.+-...+. .++.++.++...|++.....+...+.+++.|++.||+.|+ .++..
T Consensus 34 ~l~il~~vnlmny~Dr~~iagv~~~-v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~---------~v~~v 103 (493)
T KOG1330|consen 34 TLVILCLVNLMNYADRYTIAGVLKE-VQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRK---------RVIAV 103 (493)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhHH-HHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcc---------eEEee
Confidence 3444444555544444444443332 3456799999999999999999999999999999999954 44444
Q ss_pred HHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhc
Q 014698 302 AFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLD 381 (420)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 381 (420)
+..+-....+..... .+.+...+.=.+.|++.....+.....+.+.+|.++|++++++.+....+|+.+|-..++.+.+
T Consensus 104 G~~iW~~Av~~~~fs-~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~ 182 (493)
T KOG1330|consen 104 GIFIWTLAVFASGFS-NHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVAS 182 (493)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeecc
Confidence 444433333333332 1133333333788999998999999999999999999999999999999999999999999999
Q ss_pred cCCceeeeehhhhHHHHHHHHHHhhhccCCCCC
Q 014698 382 STHSWSMSLFAPSIFFYLTGTIVWLAFASSKPQ 414 (420)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (420)
+.+.|+++|...++..++++++.+++.+++++.
T Consensus 183 ~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rg 215 (493)
T KOG1330|consen 183 LTFWWRWAFRGSAVLGVIVGLLVFLFVREPERG 215 (493)
T ss_pred CccceEEEEEeehHHHHHHHHHHHhhccCcccc
Confidence 887799999999999999999888888776653
No 186
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.20 E-value=1.3e-09 Score=103.03 Aligned_cols=179 Identities=12% Similarity=0.069 Sum_probs=123.0
Q ss_pred hhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhh-----hhcCcch
Q 014698 217 IFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNL-----IATGVET 291 (420)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----~~~~~~~ 291 (420)
..++|+........+............+|.++++. |.|..+.+.. +..+... +..++.+.++||+ |||
T Consensus 8 ~~~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~~-g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grr---- 80 (491)
T PRK11010 8 IFQQPNSAILLILGFASGLPLALTSGTLQAWMTVE-NIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRR---- 80 (491)
T ss_pred HHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCc----
Confidence 34466677777777777777878888999999885 9999999886 3333332 5889999999999 764
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHhhcCC-CcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHH
Q 014698 292 TMVRKICQTIAFLSPAVCMTLSSIDLG-LPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGI 370 (420)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ 370 (420)
|.++.............+....+. +........++.+++.+...........+..|+++|+++.++......+|..
T Consensus 81 ---r~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~l 157 (491)
T PRK11010 81 ---RGWLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAML 157 (491)
T ss_pred ---hHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHH
Confidence 333333333322222222222222 2233343445666666666666666677778999999999999999999999
Q ss_pred HHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHh
Q 014698 371 VGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVW 405 (420)
Q Consensus 371 ~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (420)
+++.+.+.+.+...+|+..|++.++..++.....+
T Consensus 158 lg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~ 192 (491)
T PRK11010 158 VSGGLALWLADRYLGWQGMYWLMAALLIPCIIATL 192 (491)
T ss_pred HHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998434899999887766555544333
No 187
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.19 E-value=6.6e-10 Score=101.93 Aligned_cols=160 Identities=13% Similarity=0.026 Sum_probs=107.7
Q ss_pred HHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHH
Q 014698 224 WAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAF 303 (420)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~ 303 (420)
+...+.++....+......++|.|+++ +|.|..+.|+..+...+...+++++.+.++||++|+. ..++.......
T Consensus 7 ~~l~~~~~~~~~~~~~~~p~l~~~l~~-~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~----~~~~~~~~~~~ 81 (382)
T TIGR00902 7 RWLALGFFGYFCAYGIFLPFFPAWLKG-IGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHII----IALRLLALASA 81 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHH----HHHHHHHHHHH
Confidence 335556666667777778899999987 5999999999999999999999999999999998531 01111111111
Q ss_pred HHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccC
Q 014698 304 LSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDST 383 (420)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 383 (420)
+. . ..... ..++.+...+...+.+.+.+...+...... .+ .+++|+++.|.......+|..++|.+.|.+.++.
T Consensus 82 l~-~--~~~~~-~~~~~~~l~~~~~l~~~~~~~~~p~~~al~-~~-~~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~ 155 (382)
T TIGR00902 82 IF-A--AAFSA-GAHNAWLLFIAIGLFALFFSAGMPIGDALA-NT-WQKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMF 155 (382)
T ss_pred HH-H--HHHHH-hhhhHHHHHHHHHHHHHHHccchhHHHHHH-HH-HHHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 11 1 11111 122233333333445666554444433333 33 3577899999999999999999999999999986
Q ss_pred CceeeeehhhhH
Q 014698 384 HSWSMSLFAPSI 395 (420)
Q Consensus 384 ~~~~~~~~~~~~ 395 (420)
+|+..|.+.+.
T Consensus 156 -g~~~~f~~~~~ 166 (382)
T TIGR00902 156 -DEQNILAILTA 166 (382)
T ss_pred -ChhHHHHHHHH
Confidence 68877766544
No 188
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.19 E-value=7.7e-10 Score=104.41 Aligned_cols=149 Identities=13% Similarity=0.091 Sum_probs=109.6
Q ss_pred hhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhh-cCCCcHHHHHHHHH
Q 014698 251 ELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSI-DLGLPHWEIVGILT 329 (420)
Q Consensus 251 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 329 (420)
+++++..+.|.+.+...++..+++++.|++.||+|+| + .+..+.+...+...+... ........++.-++
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r--------~-~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~ 140 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFK--------W-SIGIGMFLSSVISIVIPWAAGGGIALVVFCRVI 140 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcc--------h-hhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHH
Confidence 4688999999999999999999999999999999975 2 222232222222222211 11223344445577
Q ss_pred HHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhc
Q 014698 330 AGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAF 408 (420)
Q Consensus 330 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (420)
.|++.+...+.......+..|+++|+++.|+.+....+|..++|.+.+.+.+...+|+..|++.++..++..++.+...
T Consensus 141 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~ 219 (465)
T TIGR00894 141 QGLAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFP 219 (465)
T ss_pred HHHhcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHh
Confidence 8888887777777778888899999999999999999999999999999988733789899888776655554444443
No 189
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=99.19 E-value=1.8e-08 Score=89.91 Aligned_cols=311 Identities=14% Similarity=0.095 Sum_probs=166.5
Q ss_pred hhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCccccchhhHHHH
Q 014698 51 ELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVF 130 (420)
Q Consensus 51 ~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~ 130 (420)
-+..+...++...+.-......+..++.++.++ +++.+.=+++-.+.+++.|........+.+ .+++ ...+-++
T Consensus 76 Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~-~~~v~~~l~Gv~las~ssg~GE~tfL~lt~-~y~~----~~l~~ws 149 (402)
T PF02487_consen 76 KLIAPFFIHRVPYWIRILICVALSAAGMLLVAF-SPSVWVRLLGVVLASLSSGLGEVTFLSLTH-FYGK----SSLSAWS 149 (402)
T ss_pred HHHhHhhhhhccchHHHHHHHHHHHHHHhheee-ccchhHHHHHHHHHhhhhhhhHHHHHHHHH-hcCc----ccccccc
Confidence 344444466665333344455566667777765 899998889999999998888877777644 5553 3567788
Q ss_pred hhhhhHHHHHHhhHHHhhhccch--hHHHHHHHHHHHHHHHHhhh-cccCcccCCCCcCccchhhhhhhhhhhhhhhhcc
Q 014698 131 GGLSFGSVAGLLLAPPIIENLGW--ESVFYIFGLLGIAWFSGFKI-LQEGETSNGATLAPRSNYINMKKSLSASLEEMGE 207 (420)
Q Consensus 131 ~~~~~g~~~g~~l~~~l~~~~gw--r~~f~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (420)
++.+.+.++|+..-..+.+ .|+ |..+.+...+.++..+.+++ +|++++.+..++.+.+....++....+..++..+
T Consensus 150 sGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (402)
T PF02487_consen 150 SGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPSPPTNRPYQESESEDEAEDDLLESETSESKPD 228 (402)
T ss_pred CCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhccccccCCCcccCCCCccccccccccccccccc
Confidence 8888888888887766666 554 77777777766655544444 4433322211111111100000000000000001
Q ss_pred cccccchhhhhh-cHHHHHHHHHHHHhHHHHHHHhh-hhhhHhhh-hhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhh
Q 014698 208 SLKDVPWKAIFR-SKAVWAMIYAHFCGSWGHYTCLS-WLPTYFSE-ELSLNLTEAAWVSILPPLASVLVTSIAAQFADNL 284 (420)
Q Consensus 208 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~ 284 (420)
...+.++++-++ -|......+-.+..++..|.++. ..|...-. ...-..++..++...+.++..+++--...+ |+
T Consensus 229 ~~~~~~~~~k~~~~k~Ll~ymiPL~lVY~aEY~InqGv~~tl~fp~~~~~~r~~Y~~Y~~~YQ~GVFISRSS~~~~--ri 306 (402)
T PF02487_consen 229 SSSKLSFKEKLKRLKPLLWYMIPLFLVYFAEYFINQGVAPTLLFPNSFFSPRDQYRWYQLLYQLGVFISRSSLPFF--RI 306 (402)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHhcCCccCCCHHHHHHHHHHHHHHHHhhhhcceeee--eh
Confidence 111122222221 23333344444555556665544 44443322 212223344555566666666655432221 22
Q ss_pred hhcCcchHHHHHHHHHHHHHH-hHHHHHHHhh-cCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHH
Q 014698 285 IATGVETTMVRKICQTIAFLS-PAVCMTLSSI-DLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITN 362 (420)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~ 362 (420)
. +.+.....-.. .++..+-... ...+.+..++.++..|+..|.........+.++.++++|..++|...
T Consensus 307 r---------~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vs 377 (402)
T PF02487_consen 307 R---------RLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVS 377 (402)
T ss_pred h---------hHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 1 21221111111 1111111111 11223444455677888888888888888888999999999999999
Q ss_pred HhhhhhHHHHHHHHHHH
Q 014698 363 TVGAVPGIVGVALTGYL 379 (420)
Q Consensus 363 ~~~~~g~~~~~~~~g~l 379 (420)
.....|..++..++-.+
T Consensus 378 vsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 378 VSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHhhHHHHHHHHHHHHH
Confidence 88888888877665443
No 190
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.19 E-value=7.3e-09 Score=93.96 Aligned_cols=313 Identities=15% Similarity=0.089 Sum_probs=189.9
Q ss_pred hhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCcc
Q 014698 41 RIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLE 120 (420)
Q Consensus 41 ~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~ 120 (420)
.+.-..+.+..++.+++.+..++|..+.++...+....... +-.|-+-++....+.|+|.+..+.....+++|..+++
T Consensus 57 aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gf--l~~N~y~~yfssallG~Gaallw~GqG~ylt~~st~~ 134 (461)
T KOG3098|consen 57 AIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGF--LFPNSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRE 134 (461)
T ss_pred HHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHH--HhcchHHHHHHHHHhhhhHHheecccceehhhcCChh
Confidence 34455666779999999999999999999999999887765 3556678899999999999999999999999999999
Q ss_pred ccchhhHHHHhhhhhHHHHHHhhHHHhhhc--------cchh-H----------HHHHHHHH---HHHHHHHhhhcccCc
Q 014698 121 ERSRAVSFVFGGLSFGSVAGLLLAPPIIEN--------LGWE-S----------VFYIFGLL---GIAWFSGFKILQEGE 178 (420)
Q Consensus 121 ~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~--------~gwr-~----------~f~~~~~~---~~~~~~~~~~~~~~~ 178 (420)
++.+..++..+....+.++|..+-..+... .+-+ . ...+.+++ ..+..+...+.|.+.
T Consensus 135 tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~~p~~~ 214 (461)
T KOG3098|consen 135 TIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDFLPSKD 214 (461)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhheeecCccc
Confidence 999999999999999988887665333221 0111 0 11111111 111122222222222
Q ss_pred ccCCCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhh--hCCCc
Q 014698 179 TSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEE--LSLNL 256 (420)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~ 256 (420)
....++..+ ....+.. ....+++++|+...+....+..+....-.....|..+.-. .+.+.
T Consensus 215 ~~~~~~~~~--------~~~~~~l---------~~~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~ 277 (461)
T KOG3098|consen 215 VVNCKSSSE--------TSFSELL---------KLTFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNT 277 (461)
T ss_pred hhhhhhhcc--------ccHHHHH---------HHHHHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcc
Confidence 111111100 0000000 1123566788887777666665555545555566554332 22222
Q ss_pred -chhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhh--cCCC--------------
Q 014698 257 -TEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSI--DLGL-------------- 319 (420)
Q Consensus 257 -~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-------------- 319 (420)
...+......+++.+.+....+.+.+|..+.+ ++..+..+..+......+... +.+.
T Consensus 278 ~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg------~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~ 351 (461)
T KOG3098|consen 278 TYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFG------RKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTP 351 (461)
T ss_pred hhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcc------cCcchhHHHHHHHHHHHHHhccccccCCCCCCccccccccc
Confidence 23345556667777777788888888876554 333333333332222222211 1111
Q ss_pred -cHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHH
Q 014698 320 -PHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYL 379 (420)
Q Consensus 320 -~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l 379 (420)
.....+..++.|++-.+........+.... |++|..+.++...-+.+++.++-...+..
T Consensus 352 ~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~~ 411 (461)
T KOG3098|consen 352 SYYLALIIGFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSPYL 411 (461)
T ss_pred chhHHHHHHHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 123344446678877766666666666555 88899999998888888777766555443
No 191
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.17 E-value=4.4e-10 Score=101.82 Aligned_cols=166 Identities=17% Similarity=0.182 Sum_probs=124.5
Q ss_pred HHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHH
Q 014698 226 MIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLS 305 (420)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~ 305 (420)
.....+.............|.+.++ +|.++.+.+...+...++..++.++.|++.||+||| + ....+...
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r-------~--~~~~~~~~ 73 (352)
T cd06174 4 LFLGFFLSGLDRGLLSPALPLLAED-LGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRR-------R--VLLLGLLL 73 (352)
T ss_pred HHHHHHHHHHhhhhhHhhHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCc-------h--hhHHHHHH
Confidence 4455566667777777888888876 499999999999999999999999999999999975 2 33333333
Q ss_pred hHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCc
Q 014698 306 PAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHS 385 (420)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~ 385 (420)
..+........ ++.....+..++.|.+.+...+.......+..|+|+|++..++.+....+|..++|.+.+.+.+.. +
T Consensus 74 ~~~~~~~~~~~-~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~ 151 (352)
T cd06174 74 FALGSLLLAFA-SSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESL-G 151 (352)
T ss_pred HHHHHHHHHHh-ccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHh-h
Confidence 33333333332 234445555577788877777777777778888899999999999999999999999999999885 6
Q ss_pred eeeeehhhhHHHHHHHHH
Q 014698 386 WSMSLFAPSIFFYLTGTI 403 (420)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~ 403 (420)
++..+.+.+...++..+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~ 169 (352)
T cd06174 152 WRWLFLILAILGLLLALL 169 (352)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 777777766655554443
No 192
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.17 E-value=3.8e-10 Score=106.38 Aligned_cols=158 Identities=13% Similarity=0.006 Sum_probs=106.7
Q ss_pred HhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHh----h
Q 014698 240 CLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSS----I 315 (420)
Q Consensus 240 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 315 (420)
+....|.+. +++|.+..+.|++.+...++..+++++.|+++||+|+|+ .+..+.+..++...... .
T Consensus 48 ~~~~~~~i~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~---------~l~~~~~~~~~~~~~~~~~~~~ 117 (467)
T PRK09556 48 FKAAQNDMI-STYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQ---------FLPFLLILSAICMLGFGASLGS 117 (467)
T ss_pred hhhhhHHHH-HhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccc---------hHHHHHHHHHHHHHHHHHHHhc
Confidence 344466655 457999999999999999999999999999999999752 22222222111111111 1
Q ss_pred cCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccC--Cceeeeehhh
Q 014698 316 DLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDST--HSWSMSLFAP 393 (420)
Q Consensus 316 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~--~~~~~~~~~~ 393 (420)
..++.....+.-++.|++.+...+.....+.+.+|+++||++.|+.+....+|.++++.+...+.+.. ++++..|.+.
T Consensus 118 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~ 197 (467)
T PRK09556 118 GSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFP 197 (467)
T ss_pred ccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHH
Confidence 11223334444467788777667777777778889999999999999999999999999887776642 2466666665
Q ss_pred hHHHHHHHHHHhhh
Q 014698 394 SIFFYLTGTIVWLA 407 (420)
Q Consensus 394 ~~~~~~~~~~~~~~ 407 (420)
++..++.+++.+..
T Consensus 198 g~~~~~~~i~~~~~ 211 (467)
T PRK09556 198 SIIALIIGFIGLRY 211 (467)
T ss_pred HHHHHHHHHHHHHh
Confidence 55555444444443
No 193
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=99.16 E-value=6.8e-08 Score=87.89 Aligned_cols=251 Identities=10% Similarity=0.003 Sum_probs=147.2
Q ss_pred CccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHH-hhh---cccCcccCCCCcC----ccc
Q 014698 118 PLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSG-FKI---LQEGETSNGATLA----PRS 189 (420)
Q Consensus 118 ~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~----~~~ 189 (420)
+++++.+.++...-.-....+++|++.|.+.+..+.+....+.+...++.... +++ +-+..|..+.+++ +.+
T Consensus 143 ~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L~~~~~~~~~~~~ 222 (432)
T PF06963_consen 143 DPGALARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFLLARVYNSVPALAVKKRSSESESS 222 (432)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhcCCCCCcccccc
Confidence 34567788888888888999999999999999889888887777766653321 111 1111111111111 111
Q ss_pred hhhh---hhhhhhhhhhhhc--ccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHH
Q 014698 190 NYIN---MKKSLSASLEEMG--ESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSI 264 (420)
Q Consensus 190 ~~~~---~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 264 (420)
+... .++......++.. -+.....|+..+++|.+.......++ ++..-++...+..|+.++ |+++...|..-+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~Y~~q~vflas~alalL-Y~TVLsf~~lmt~yl~~~-G~s~~~igi~R~ 300 (432)
T PF06963_consen 223 SDEESSSESSSDPSILKRLWNPLRTIIRGWRTYFRQPVFLASFALALL-YFTVLSFGGLMTAYLKSQ-GYSPSVIGIFRG 300 (432)
T ss_pred ccccccccccchhhHHHHHHHHHHHHhccHHHHHhCHHHHHHHHHHHH-HHHHhcCcHHHHHHHHHC-CCCHHHHHHHHH
Confidence 0000 0000000000000 11113446667777766555444444 444556677888999887 999999999999
Q ss_pred hhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHH-----HHHHHHhhhhhh
Q 014698 265 LPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGI-----LTAGLALSSFAL 339 (420)
Q Consensus 265 ~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~g~~~~~~~~ 339 (420)
...+.++.++.+..++.+|+|..|. ..+.+..-......+...+....++....-... .+-=+|.-++-.
T Consensus 301 ~gav~Gl~gT~~~p~l~~riGlvr~-----G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL 375 (432)
T PF06963_consen 301 LGAVFGLLGTWVYPWLMKRIGLVRA-----GLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDL 375 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHhcchhh-----HHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhH
Confidence 9999999999999999999996421 111111111222222222222222101112222 222234444556
Q ss_pred hhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHH
Q 014698 340 SGLYCTHQDISPEYASILLGITNTVGAVPGIVGVAL 375 (420)
Q Consensus 340 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~ 375 (420)
......++.+|+++||+..|+-+..+++...+.-.+
T Consensus 376 ~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~ 411 (432)
T PF06963_consen 376 AVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVL 411 (432)
T ss_pred HHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 666777788999999999999999999877665443
No 194
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.16 E-value=9.4e-10 Score=115.28 Aligned_cols=167 Identities=11% Similarity=0.094 Sum_probs=111.5
Q ss_pred hhhhcHHHHHHHHHHHHhHHHHHHHhhhhhh----HhhhhhCC-CcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcc
Q 014698 216 AIFRSKAVWAMIYAHFCGSWGHYTCLSWLPT----YFSEELSL-NLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVE 290 (420)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~ 290 (420)
.++++++++.+....++..++.+....-++. .+.+..+. +....++..+...+..++.++++|+++||+++|
T Consensus 6 ~l~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk--- 82 (1140)
T PRK06814 6 YLMKSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKA--- 82 (1140)
T ss_pred hhhhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHH---
Confidence 5677777777766666665554433222221 12221111 123467777788889999999999999999975
Q ss_pred hHHHHHHHH--HHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhh
Q 014698 291 TTMVRKICQ--TIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVP 368 (420)
Q Consensus 291 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 368 (420)
+.... ............ ....++.+.+++..++.|++.+...+.....+.+.++++++++++|+.++...+|
T Consensus 83 ----~~~~~~~~~~~~~~~~~~~--~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig 156 (1140)
T PRK06814 83 ----KLAKILKFAEIGIAALAIY--GFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIA 156 (1140)
T ss_pred ----HHHHHHHHHHHHHHHHHHH--HHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHH
Confidence 22111 111111111111 1112335555666688888888888888888888899999999999999999999
Q ss_pred HHHHHHHHHHHhccCCceeeeehh
Q 014698 369 GIVGVALTGYLLDSTHSWSMSLFA 392 (420)
Q Consensus 369 ~~~~~~~~g~l~~~~~~~~~~~~~ 392 (420)
..+||.++|.+.+.. ++...|..
T Consensus 157 ~~igp~l~g~l~~~~-~~~~~~~~ 179 (1140)
T PRK06814 157 ILLGTIIGGLATISG-NFVILVAL 179 (1140)
T ss_pred HHHHHHHHHHHHhcc-ccHHHHHH
Confidence 999999999999875 67666633
No 195
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.14 E-value=1.3e-09 Score=95.78 Aligned_cols=178 Identities=16% Similarity=0.154 Sum_probs=117.7
Q ss_pred HHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHH
Q 014698 221 KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQT 300 (420)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 300 (420)
|+++...+.... .+.......-+...+.+.+|+|+.|.+++.+...+.+.+.++..|.+.||+|.| ++...
T Consensus 14 ~~L~~S~~af~v-~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR--------~~~~~ 84 (417)
T COG2223 14 RNLWLSTLAFDV-GFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGR--------KWTIL 84 (417)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCch--------HHHHH
Confidence 444444444333 333334444444445577899999999999999999999999999999999974 34333
Q ss_pred HHHHHhHHHHHHHhhcCCCc-HHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHH
Q 014698 301 IAFLSPAVCMTLSSIDLGLP-HWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYL 379 (420)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l 379 (420)
...+...-++.+.....+.. +..++.-++.|++.+ ........+..-+|||++|.++|+.. .+|+|..+...+...+
T Consensus 85 s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~Ga-sFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v 162 (417)
T COG2223 85 SMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLAGA-SFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLV 162 (417)
T ss_pred HHHHHHHHHHHHHHHccCCchHHHHHHHHHHhcccc-eehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHH
Confidence 33332333333222222222 233333355566554 44455556667799999999999988 9999999999999998
Q ss_pred hccCCc--eeeeehhhhHHHHHHHHHHhhhcc
Q 014698 380 LDSTHS--WSMSLFAPSIFFYLTGTIVWLAFA 409 (420)
Q Consensus 380 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 409 (420)
....+. ++.+-.+.....++..+..++..+
T Consensus 163 ~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~ 194 (417)
T COG2223 163 AVAFGFLAWRNVAGIYVVALAIAAVLAWLGMN 194 (417)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 888642 666666666666666666666554
No 196
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.14 E-value=1.4e-09 Score=99.87 Aligned_cols=159 Identities=12% Similarity=-0.000 Sum_probs=105.8
Q ss_pred HHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHH
Q 014698 229 AHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAV 308 (420)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
.++....+......++|.|+++ +|.|..+.|+..+...+...+++++.|++.||++|+.. .++........ .
T Consensus 12 ~~~~~~~~~g~~~p~l~~~l~~-~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~----~~~~~~~~~~~---~ 83 (382)
T PRK11128 12 SYFGYFFAYGVFLPFWSVWLKG-QGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIP----ALRLLALLTLL---F 83 (382)
T ss_pred HHHHHHHHHHHHhhhHHHHHHh-cCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHH----HHHHHHHHHHH---H
Confidence 3555556667778899999977 59999999999999999999999999999999997411 01222211111 1
Q ss_pred HHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceee
Q 014698 309 CMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSM 388 (420)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~ 388 (420)
... .....++.+...+...+.+.+.+...+..... .++. +++|+++.+.......+|..++|.+++.+.++. +++.
T Consensus 84 ~~~-~~~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~-~~~~-~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~-g~~~ 159 (382)
T PRK11128 84 AVA-FWFGAHSFWLLFVAIGLFNLFFSPLVPLTDAL-ANTW-QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWF-GEQA 159 (382)
T ss_pred HHH-HHHhcccHHHHHHHHHHHHHHHcccccHHHHH-HHHH-HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHc-ChhH
Confidence 111 11222223333333455566655454443333 3333 456788888888888999999999999999986 7888
Q ss_pred eehhhhHHHHH
Q 014698 389 SLFAPSIFFYL 399 (420)
Q Consensus 389 ~~~~~~~~~~~ 399 (420)
.|++.++..++
T Consensus 160 ~f~~~~~~~~~ 170 (382)
T PRK11128 160 ILWILTAGVAS 170 (382)
T ss_pred HHHHHHHHHHH
Confidence 88776654333
No 197
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.14 E-value=1.7e-09 Score=113.66 Aligned_cols=158 Identities=15% Similarity=0.119 Sum_probs=110.3
Q ss_pred hhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCc--chhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHH
Q 014698 216 AIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNL--TEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTM 293 (420)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~ 293 (420)
..++++.++.+.+..++..+........+..++.+.++.+. ...+++.+...++.++++++.|+++||+|||
T Consensus 4 ~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk------ 77 (1146)
T PRK08633 4 NLLKIIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKN------ 77 (1146)
T ss_pred chhhhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHH------
Confidence 45667888888777777766665555555555554455543 3357777888889999999999999999964
Q ss_pred HHHHHHHHHHHHhHHHH--HHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHH
Q 014698 294 VRKICQTIAFLSPAVCM--TLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIV 371 (420)
Q Consensus 294 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~ 371 (420)
..+..+..+..+.. .......++....++..++.|++.+...+.....+.+..|+++|++++|+.+....+|..+
T Consensus 78 ---~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~l 154 (1146)
T PRK08633 78 ---RVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILA 154 (1146)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHH
Confidence 22222222211111 1111112224445555577788888777777777888889999999999999999999999
Q ss_pred HHHHHHHHhcc
Q 014698 372 GVALTGYLLDS 382 (420)
Q Consensus 372 ~~~~~g~l~~~ 382 (420)
+|.+++.+.+.
T Consensus 155 g~~l~~~l~~~ 165 (1146)
T PRK08633 155 GTALFSFLFES 165 (1146)
T ss_pred HHHHHHHHHHh
Confidence 99999999876
No 198
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.11 E-value=4.7e-10 Score=100.53 Aligned_cols=177 Identities=16% Similarity=0.176 Sum_probs=110.3
Q ss_pred hhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHH
Q 014698 218 FRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKI 297 (420)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~ 297 (420)
.||+.++......+++.+.......+.|.++++..|+|.++.|.+.+...+..++.+++.|.++||++.| |..
T Consensus 4 ~~~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~k-------K~L 76 (412)
T PF01306_consen 4 FKNKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLK-------KHL 76 (412)
T ss_dssp CHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTC-------SHH
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhh-------HHH
Confidence 4588999999999999999888899999999987799999999999999999999999999999999987 333
Q ss_pred HHHHHHHH--hHHHHH-HHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhh---hhccCccchHHHHHHHHHhhhhhHHH
Q 014698 298 CQTIAFLS--PAVCMT-LSSIDLGLPHWEIVGILTAGLALSSFALSGLYCT---HQDISPEYASILLGITNTVGAVPGIV 371 (420)
Q Consensus 298 ~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~g~~~g~~~~~~~~g~~~ 371 (420)
+.....+. .+.... ......+.+. ....++.++..+....+..... .+.. .++.+--.|=....+++|.++
T Consensus 77 l~~i~~l~~l~~pff~~v~~pll~~n~--~lg~iig~i~l~~~f~~~~~~~Ea~~er~-sr~~~feYG~~R~wGSig~ai 153 (412)
T PF01306_consen 77 LWFIAILLLLFGPFFIYVFGPLLQSNF--WLGAIIGGIYLGLVFNAGVPLSEAYAERV-SRRNGFEYGRARMWGSIGFAI 153 (412)
T ss_dssp HHHHHHHHHTCHHHHHHTHHHHHHTT---HHHHHHTTTTTTTTTTTHHHHHHHHHHHH-HHHHSS-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHcccchHHHHHHHHH-HHHhcCCcchHHHHhhHHHHH
Confidence 33333222 122111 1111111111 1222222333332232222221 1221 233455667778888999999
Q ss_pred HHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhh
Q 014698 372 GVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWL 406 (420)
Q Consensus 372 ~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (420)
++.+.|.+.+. +.+..|++.....++..++.+.
T Consensus 154 ~s~~~G~L~~i--~p~~~fwi~s~~~~il~lll~~ 186 (412)
T PF01306_consen 154 ASLLAGILFNI--NPNIIFWIASAAAIILLLLLLL 186 (412)
T ss_dssp HHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHhheeeee--CccHHHHHHHHHHHHHHHHHHH
Confidence 99999999986 4455667655444444333333
No 199
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.11 E-value=1.2e-09 Score=103.52 Aligned_cols=135 Identities=14% Similarity=0.038 Sum_probs=96.3
Q ss_pred cchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhh-cCCC-cHHHHHHHHHHHHH
Q 014698 256 LTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSI-DLGL-PHWEIVGILTAGLA 333 (420)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~g~~ 333 (420)
..+.++..+...++..+++++.|+++||+||| +.+ ..+.....+...+... .... ....++.-++.|++
T Consensus 70 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr--------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~ 140 (481)
T TIGR00879 70 SSLWGLVVSIFLVGGFIGALFAGWLSDRFGRK--------KSL-LIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIG 140 (481)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhH--------HHH-HHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhh
Confidence 78899999999999999999999999999964 232 3333333333222222 2211 22445555778888
Q ss_pred hhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHH---HHHhccCCceeeeehhhhHHHHHH
Q 014698 334 LSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALT---GYLLDSTHSWSMSLFAPSIFFYLT 400 (420)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~---g~l~~~~~~~~~~~~~~~~~~~~~ 400 (420)
.+...+.....+.+..|+++|+++.++.+....+|..+++.+. +...+.. +|+..|.+.+...++.
T Consensus 141 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~-~w~~~f~~~~~~~~~~ 209 (481)
T TIGR00879 141 VGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTL-GWRIPLGLQLIPAGLL 209 (481)
T ss_pred hhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCc-cHHHHHHHHHHHHHHH
Confidence 8877777777777888999999999999999999999999988 5544553 7888887755444433
No 200
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.10 E-value=2.5e-09 Score=97.21 Aligned_cols=165 Identities=10% Similarity=0.008 Sum_probs=102.8
Q ss_pred HhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHH-HHHhhcCC
Q 014698 240 CLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCM-TLSSIDLG 318 (420)
Q Consensus 240 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 318 (420)
.....|.+.+| .|.|..+.++.... .+...+ .++.|+++||++.|+..+ |+..+..+.+..++.. .+......
T Consensus 7 ~~~~~~~~~~~-~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Gr---r~~~l~~~~~~~~~~~~~l~~~~~~ 80 (356)
T TIGR00901 7 VGNTLPYWLRS-KNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGR---RRSWLVLTQVLLLSLLLILSFLVPS 80 (356)
T ss_pred HHhHHHHHHHH-cCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCc---cHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 34567777776 59999999988644 444444 889999999983211000 3333333333333332 22222221
Q ss_pred CcH-HHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCc-------eeeee
Q 014698 319 LPH-WEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHS-------WSMSL 390 (420)
Q Consensus 319 ~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~-------~~~~~ 390 (420)
... ......++.+.+.+...+.....+.+..|+|+|+.+.|+......+|..+++.+.+.+.+..+. |+..|
T Consensus 81 ~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f 160 (356)
T TIGR00901 81 TDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIF 160 (356)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHH
Confidence 222 2222233445555555555566677778999999999999999999999999999999887642 88888
Q ss_pred hhhhHHHHHHHHHHhhhccC
Q 014698 391 FAPSIFFYLTGTIVWLAFAS 410 (420)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~ 410 (420)
++.++..++.....++..++
T Consensus 161 ~i~ai~~l~~~~~~~~~~~e 180 (356)
T TIGR00901 161 FWTALLILPGLLVTLFLAKE 180 (356)
T ss_pred HHHHHHHHHHHHHHHHhccC
Confidence 87776555544443333344
No 201
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.08 E-value=6.4e-10 Score=96.51 Aligned_cols=152 Identities=16% Similarity=0.143 Sum_probs=123.3
Q ss_pred CCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHH
Q 014698 253 SLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGL 332 (420)
Q Consensus 253 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 332 (420)
+-+..+.|+++....+..++.+++.|.+.||+|. +..+..++........++.+..+ .+..+++=.+-|+
T Consensus 102 ~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy---------~ipm~~Gl~vmf~sTilFafg~s-y~~l~vAR~LQgv 171 (464)
T KOG3764|consen 102 DRENTQIGLLFASKALVQLLVNPFFGNLIDRIGY---------KIPMVAGLFVMFLSTILFAFGNS-YPMLFVARSLQGV 171 (464)
T ss_pred cccccchhHHHHHHHHHHHHhcccchhhHHHhcc---------ccHHHHHHHHHHHHHHHHHHcch-hHHHHHHHHHhhh
Confidence 5566788999999999999999999999999995 45566666666666666655433 3444455578899
Q ss_pred HhhhhhhhhhhhhhhccCcc-chHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhccCC
Q 014698 333 ALSSFALSGLYCTHQDISPE-YASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASS 411 (420)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (420)
+..........+..+.+|.| +|++++|+.-.+..+|-.+||+.+|.++|.. ++..+|.+.++++++-..+.++..+.+
T Consensus 172 gsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~-Gk~aPFlVL~~v~Lld~~L~l~vi~p~ 250 (464)
T KOG3764|consen 172 GSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFA-GKSAPFLVLAIVLLLDGALQLLVIEPT 250 (464)
T ss_pred hHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhc-CCcCcHHHHHHHHHHHHHHHHheeCcc
Confidence 99888888888888988875 4899999999999999999999999999996 899999999998888888777766654
Q ss_pred CCCC
Q 014698 412 KPQN 415 (420)
Q Consensus 412 ~~~~ 415 (420)
+.++
T Consensus 251 ~~~~ 254 (464)
T KOG3764|consen 251 EMDP 254 (464)
T ss_pred ccCc
Confidence 4444
No 202
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.08 E-value=7e-09 Score=93.87 Aligned_cols=155 Identities=10% Similarity=0.031 Sum_probs=108.6
Q ss_pred hhhhhhHhhhhhCCCcch-hhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCC
Q 014698 241 LSWLPTYFSEELSLNLTE-AAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGL 319 (420)
Q Consensus 241 ~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (420)
..+...++.+.+|++..+ .|.+.+....+..+..+.+|++.||+|.| ..+..+.+.-.+...+..+.. +
T Consensus 45 ~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K---------~vL~l~~l~Wsl~t~L~~fa~-S 114 (511)
T TIGR00806 45 ESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYK---------PVLVLQALSFVCVWLLLLLGT-S 114 (511)
T ss_pred HHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCch---------HHHHHHHHHHHHHHHHHHHHH-H
Confidence 344555677688999999 99999999999999999999999999964 333333333333333333322 2
Q ss_pred cHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCcee---eeehhhhHH
Q 014698 320 PHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWS---MSLFAPSIF 396 (420)
Q Consensus 320 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~---~~~~~~~~~ 396 (420)
...+.+.-++.|++.+... .....+...+|+++|+++.|+.+....+|.++++.+.+.+. .. +|+ ...++....
T Consensus 115 l~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~-s~-gWr~y~~Ln~Isl~s 191 (511)
T TIGR00806 115 VWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV-TL-GWISYSTLNIISLVF 191 (511)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hc-CchhHHHHHHHHHHH
Confidence 3344445588899988777 77777778899999999999999999999999999999954 33 333 233333333
Q ss_pred HHHHHHHHhhhc
Q 014698 397 FYLTGTIVWLAF 408 (420)
Q Consensus 397 ~~~~~~~~~~~~ 408 (420)
..++.++.+++.
T Consensus 192 ~~~a~~~a~~LP 203 (511)
T TIGR00806 192 MTFSVFLALFLK 203 (511)
T ss_pred HHHHHHHHHhCC
Confidence 444444444433
No 203
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.08 E-value=1.6e-09 Score=101.51 Aligned_cols=175 Identities=10% Similarity=0.093 Sum_probs=109.6
Q ss_pred hHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHH
Q 014698 233 GSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTL 312 (420)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (420)
..........+++.|+.+.+|.++.++|.+.+...+...+..++.|.++||.++|.-+ ||..+..+....++...+
T Consensus 11 ~~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Gr----rr~~i~~~~~~~~i~~~~ 86 (437)
T TIGR00792 11 NNFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGK----FRPWLLIGAIPFSIVLVL 86 (437)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCC----cchhHHHhHHHHHHHHHH
Confidence 3445556667889999998999999999999999999999999999999996543111 344444443333333333
Q ss_pred HhhcCCCc-----HHHHHHHHHHHHHhhhhhhhhhhhhhhcc-CccchHHHHHHHHHhhhhhHHHHHHHHHHHhccC---
Q 014698 313 SSIDLGLP-----HWEIVGILTAGLALSSFALSGLYCTHQDI-SPEYASILLGITNTVGAVPGIVGVALTGYLLDST--- 383 (420)
Q Consensus 313 ~~~~~~~~-----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~--- 383 (420)
....++.. .+.....++.+.+.+....+......+.. ++++|++..+..+....+|+.+++.+.+.+....
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~ 166 (437)
T TIGR00792 87 LFTTPDFSATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGG 166 (437)
T ss_pred HHhCCCCCcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 33222211 12222334455555544444444444544 5688999999999988898888877776666422
Q ss_pred ---CceeeeehhhhHHHHHHHHHHhhhccCC
Q 014698 384 ---HSWSMSLFAPSIFFYLTGTIVWLAFASS 411 (420)
Q Consensus 384 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (420)
.+|+..+.+.+++..+...+.+...+|+
T Consensus 167 ~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~ 197 (437)
T TIGR00792 167 DDKFGWFMFALVLALIGVVSLIICFFGTKER 197 (437)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHcCCEec
Confidence 2455555555555444444444444443
No 204
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.07 E-value=6.5e-09 Score=96.18 Aligned_cols=182 Identities=14% Similarity=0.086 Sum_probs=122.2
Q ss_pred HHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhh----hhhcCcchHHHHHH
Q 014698 222 AVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADN----LIATGVETTMVRKI 297 (420)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~~~~~~~~~~~~~~ 297 (420)
+........+...+++.....+.+.|+++ +|.++...+.+.....+..++.+++.|+++|| +||| +.
T Consensus 5 ~li~~~~~~~Giq~~~~l~~~~l~~yl~~-lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRR--------rp 75 (477)
T TIGR01301 5 KLLRVASVAAGVQFGWALQLSLLTPYVQE-LGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRR--------RP 75 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCCh--------HH
Confidence 34444555555567777777788888865 69999999999999999999999999999995 8874 34
Q ss_pred HHHHHHHHhHHHHHHHhhcCC------------Cc----HHHHHHHHHHHHHhhhhhhhhhhhhhhccCccch--HHHHH
Q 014698 298 CQTIAFLSPAVCMTLSSIDLG------------LP----HWEIVGILTAGLALSSFALSGLYCTHQDISPEYA--SILLG 359 (420)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~------------~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--g~~~g 359 (420)
.+..+.......+.+.....+ .. ....+.+.+..++......+....+.+..|+++| +.+.+
T Consensus 76 ~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~ 155 (477)
T TIGR01301 76 FIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANA 155 (477)
T ss_pred HHHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHH
Confidence 444334434344333332211 00 1122223334455665666777777787887654 68999
Q ss_pred HHHHhhhhhHHHHHHHHHHH--hccC------------CceeeeehhhhHHHHHHHHHHhhhccCCC
Q 014698 360 ITNTVGAVPGIVGVALTGYL--LDST------------HSWSMSLFAPSIFFYLTGTIVWLAFASSK 412 (420)
Q Consensus 360 ~~~~~~~~g~~~~~~~~g~l--~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (420)
+.+.+.++|+.+++.+++.. .+.. .+++..|++.+++.+++..+..+..+|..
T Consensus 156 ~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 156 YFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENP 222 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccC
Confidence 99999999999999998865 2211 14566777777777777766666666543
No 205
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.05 E-value=1.6e-09 Score=83.95 Aligned_cols=134 Identities=12% Similarity=0.167 Sum_probs=92.3
Q ss_pred HhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhh
Q 014698 264 ILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLY 343 (420)
Q Consensus 264 ~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 343 (420)
+...++..++.++.+++.||+++| +.. ..+.............. ++........++.|.+.+...+....
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~~g~~--------~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~ 74 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDRFGRK--------PVL-LVGLFIFVLSTAMFALS-SNITVLIIARFLQGFGAAFALVAGAA 74 (141)
T ss_pred EeehhHHHHHHhhHHHHHhhcchh--------HHH-HHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 455677888999999999999864 222 23322222332222222 22444445557777777766666666
Q ss_pred hhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhc
Q 014698 344 CTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAF 408 (420)
Q Consensus 344 ~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (420)
...+..|+++|+++.++.+....++..++|.+.+.+.+.. +++..+.+.+....+.....+...
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 138 (141)
T TIGR00880 75 LIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFL-GWRAPFLFLAILALAAFILLAFLL 138 (141)
T ss_pred HHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhccc-chHHHHHHHHHHHHHHHHHHhhcC
Confidence 7777789999999999999999999999999999999875 677677776655555554444433
No 206
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.02 E-value=4.5e-09 Score=94.62 Aligned_cols=185 Identities=13% Similarity=0.107 Sum_probs=140.2
Q ss_pred hhhhc-HHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhC----CCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcc
Q 014698 216 AIFRS-KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELS----LNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVE 290 (420)
Q Consensus 216 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~ 290 (420)
..+++ |.++.+...-+.--+++|+....+..|+..+.+ +|..++.-+++.++...-+..+++|+++||+-.+
T Consensus 15 ~~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~--- 91 (498)
T COG3104 15 KFFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGT--- 91 (498)
T ss_pred ccCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcch---
Confidence 34444 567777888889999999999999999998888 9998888787877777778888999999998432
Q ss_pred hHHHHHHHHHHHHHHhHHHHHHHhhcC-CCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccc--hHHHHHHHHHhhhh
Q 014698 291 TTMVRKICQTIAFLSPAVCMTLSSIDL-GLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEY--ASILLGITNTVGAV 367 (420)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~g~~~g~~~~~~~~ 367 (420)
|+. +..+.++..++..+..... .......+.+.+++++.|.+=+.......+.+|+++ |-.++++.....++
T Consensus 92 ----~~t-I~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNi 166 (498)
T COG3104 92 ----RRT-IVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINI 166 (498)
T ss_pred ----hHH-HHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeeh
Confidence 333 3444444455544444442 335567777888889999888888888888777533 77788888999999
Q ss_pred hHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhcc
Q 014698 368 PGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFA 409 (420)
Q Consensus 368 g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (420)
|+.++|.+.+++.++. +|+..|...++-+..+.+..+...+
T Consensus 167 Gsl~~p~i~~~~~~~~-g~~~gF~~aavGm~~gl~~f~~~~r 207 (498)
T COG3104 167 GSLIAPIITGLLAINY-GWHVGFGLAAVGMIIGLVIFLLGRR 207 (498)
T ss_pred HHHHHHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHHHHHccc
Confidence 9999999999999996 7888888887766666555554443
No 207
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.01 E-value=5.2e-09 Score=95.12 Aligned_cols=143 Identities=16% Similarity=0.180 Sum_probs=98.0
Q ss_pred HhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCC
Q 014698 240 CLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGL 319 (420)
Q Consensus 240 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (420)
....+|.+.+ ++|.+..+.++..+...++..++.++.|++.||+|+| +. + ..+........... .. ++
T Consensus 19 ~~~~lp~l~~-~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r-------~~-~-~~~~~~~~~~~~~~-~~-~~ 86 (355)
T TIGR00896 19 VGPLLPQIRS-ALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEE-------RS-V-AAGLLLIAAGILIR-SA-PG 86 (355)
T ss_pred CcccHHHHHH-HhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCch-------HH-H-HHHHHHHHHHHHHH-Hh-cc
Confidence 3456666665 4799999999999999999999999999999999975 22 2 22322222222222 22 22
Q ss_pred cHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCc-eeeeehhhhH
Q 014698 320 PHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHS-WSMSLFAPSI 395 (420)
Q Consensus 320 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~-~~~~~~~~~~ 395 (420)
.....+..++.|++.+...........+.. +++|+++.+..+....+|..+++.+.+.+.+..+. |+..|...++
T Consensus 87 ~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~ 162 (355)
T TIGR00896 87 TALLFAGTALIGVGIAIINVLLPSLIKRDF-PQRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWAL 162 (355)
T ss_pred HHHHHHHHHHHHHHHHHHhccchHHHHHhC-cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHH
Confidence 344444446667766654444444444444 57899999999999999999999999998876533 6666655444
No 208
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.00 E-value=5.9e-09 Score=98.88 Aligned_cols=148 Identities=8% Similarity=-0.002 Sum_probs=100.4
Q ss_pred CCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhc---------CCCc--H
Q 014698 253 SLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSID---------LGLP--H 321 (420)
Q Consensus 253 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~--~ 321 (420)
+.+..+.++..+...++..+++++.|+++||+||| +.+ ..+.....++....... .+.. .
T Consensus 51 ~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr--------~~~-~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~ 121 (479)
T PRK10077 51 SAANSLLGFCVASALIGCIIGGALGGYCSNRFGRR--------DSL-KIAAVLFFISALGSAWPEFGFTSIGPDNTGYVP 121 (479)
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccH--------HHH-HHHHHHHHHHHHHHHhhccccccccccchhHHH
Confidence 78888999999999999999999999999999974 222 22222222222221110 1111 1
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhcc-------CCceeeeehhhh
Q 014698 322 WEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDS-------THSWSMSLFAPS 394 (420)
Q Consensus 322 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~-------~~~~~~~~~~~~ 394 (420)
...+.-++.|++.+...+.....+.+..|+++|+++.++.+....+|..+++.+.+.+... ..+|+..|++.+
T Consensus 122 ~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~ 201 (479)
T PRK10077 122 EFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEA 201 (479)
T ss_pred HHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHH
Confidence 2233347778888888888888888889999999999999999899999888766655321 126787887766
Q ss_pred HHHHHHHHHHhhhccC
Q 014698 395 IFFYLTGTIVWLAFAS 410 (420)
Q Consensus 395 ~~~~~~~~~~~~~~~~ 410 (420)
+..++..+. .+..++
T Consensus 202 ~~~~~~~~~-~~~l~~ 216 (479)
T PRK10077 202 IPALLFLML-LYFVPE 216 (479)
T ss_pred HHHHHHHHH-HHcCCC
Confidence 555554433 333444
No 209
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.99 E-value=3.2e-08 Score=86.61 Aligned_cols=161 Identities=14% Similarity=0.039 Sum_probs=120.3
Q ss_pred HHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHh
Q 014698 235 WGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSS 314 (420)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (420)
......+..+-..+++.++.+..+++++......+..+.++..+++.+|+|.| .-+..++.+.++...++.
T Consensus 26 G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk---------~gi~lgL~l~avg~~lF~ 96 (422)
T COG0738 26 GFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYK---------AGIVLGLLLYAVGAALFW 96 (422)
T ss_pred HHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhH---------HHHHHHHHHHHHHHHHHh
Confidence 33444455666777888999999999999999999999999999999999954 445555555555555544
Q ss_pred hc--CCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhcc----------
Q 014698 315 ID--LGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDS---------- 382 (420)
Q Consensus 315 ~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~---------- 382 (420)
.. ..+.......+++.+.+.+......+..+...-+++..+.-+.+.+.+..+|++++|.+++.+.++
T Consensus 97 pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~ 176 (422)
T COG0738 97 PAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQ 176 (422)
T ss_pred hhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHH
Confidence 22 223344556668889999988888888888878888888889999999999999999999999884
Q ss_pred --------CCceeeeehhhhHHHHHHHHHH
Q 014698 383 --------THSWSMSLFAPSIFFYLTGTIV 404 (420)
Q Consensus 383 --------~~~~~~~~~~~~~~~~~~~~~~ 404 (420)
...++.++...+....+..+..
T Consensus 177 ~~~~~~~~~~~v~~pYl~~~~~lvll~v~~ 206 (422)
T COG0738 177 ILAIKGADASSVQFPYLILAGLLVLLAVLI 206 (422)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Confidence 1245666666655444444433
No 210
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.99 E-value=1.6e-08 Score=93.21 Aligned_cols=177 Identities=14% Similarity=0.024 Sum_probs=110.1
Q ss_pred HHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHH--HhhHHHHHHHHHhh-hhhhhhhhhcCcchHHHHHHHHH
Q 014698 224 WAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVS--ILPPLASVLVTSIA-AQFADNLIATGVETTMVRKICQT 300 (420)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~-g~l~dr~~~~~~~~~~~~~~~~~ 300 (420)
......++.+...+......+|.++++. |.|..+.|++. ........+..++. ++..||.|+| |.+.+.
T Consensus 4 ~~~~~ly~~~g~~~~~~~p~lp~~l~~~-g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r-------~~~i~~ 75 (390)
T TIGR02718 4 ITLGLLYLSQGIPIGLAMDALPTLLRED-GAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRR-------RSWVLP 75 (390)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcc-------hhHHHH
Confidence 4455566777777777888999999986 99999999973 55677777777776 4468888876 443333
Q ss_pred HHHHHhHHHHHHHhhcCC-C-cHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHH
Q 014698 301 IAFLSPAVCMTLSSIDLG-L-PHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGY 378 (420)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~ 378 (420)
...........+...... . ..+.........+......+.......++.++++++...+.......+|..+++...++
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~ 155 (390)
T TIGR02718 76 MQCLVSACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLV 155 (390)
T ss_pred HHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 322222112112111111 1 22222222333333333333333345566677777888888777778889999988889
Q ss_pred HhccCCceeeeehhhhHHHHHHHHHHhhhcc
Q 014698 379 LLDSTHSWSMSLFAPSIFFYLTGTIVWLAFA 409 (420)
Q Consensus 379 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (420)
+.++. +++..|++.++..++..+..+...+
T Consensus 156 l~~~~-gw~~~f~~~a~l~~~~~~~~~~~~~ 185 (390)
T TIGR02718 156 LFGKF-GQRPAFLLVACVPLASLVCVLWLKD 185 (390)
T ss_pred HHHHh-CHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99886 7888888887766655555444433
No 211
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.98 E-value=2.8e-09 Score=92.04 Aligned_cols=125 Identities=14% Similarity=0.123 Sum_probs=96.2
Q ss_pred CCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHH-HHHHHH
Q 014698 254 LNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVG-ILTAGL 332 (420)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~ 332 (420)
.+...+|++-+.+.+...+.++.+|.++||+| ||..+..+.+..++...++....+ . ..++. =++.|+
T Consensus 65 ~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yG---------Rkpvll~c~~~va~s~ll~~~S~~-F-~afv~aR~l~Gi 133 (451)
T KOG2615|consen 65 ASVFYAGFLGSSFSILQFISSPLWGCLSDRYG---------RKPVLLACLIGVALSYLLWALSRN-F-AAFVLARFLGGI 133 (451)
T ss_pred ccchhhhhHhhHHHHHHHHhhhhhhhhhhhhC---------chHHHHHHHHHHHHHHHHHHHHHH-H-HHHHHHHHhhhh
Confidence 35567899999999999999999999999999 557777777777777776665432 2 23333 366677
Q ss_pred HhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhc---cCCceeeee
Q 014698 333 ALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLD---STHSWSMSL 390 (420)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~---~~~~~~~~~ 390 (420)
+-+ ......+.+.+..++|+|+.+++..++..++|-++||.++|++.. ..|.+..++
T Consensus 134 ~kg-nl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~al 193 (451)
T KOG2615|consen 134 FKG-NLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFAL 193 (451)
T ss_pred ccC-chHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHH
Confidence 766 445566667777889999999999999999999999999999987 445554333
No 212
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.98 E-value=3.5e-08 Score=92.89 Aligned_cols=178 Identities=13% Similarity=0.137 Sum_probs=114.3
Q ss_pred hhhcHHHHHHHHHHHHhHHHHHHH----hhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchH
Q 014698 217 IFRSKAVWAMIYAHFCGSWGHYTC----LSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETT 292 (420)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~ 292 (420)
.+++++++.......+.....+.. ...++...+ ..|-+ .+..++.....++..++.++.|+++|.+||
T Consensus 36 ~~~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~-diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGR------ 107 (599)
T PF06609_consen 36 YYRSPRFIASFAAFSLAVIAAYFVLVLPASILPYINA-DIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGR------ 107 (599)
T ss_pred ceeCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH-hcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcc------
Confidence 345676666554444333322222 233444344 45655 556677788889999999999999999994
Q ss_pred HHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHH
Q 014698 293 MVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVG 372 (420)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~ 372 (420)
+.....+.++..++..+..... +....+....+.|++.+.. ......+.|..|.+.|..+.++.....-.....+
T Consensus 108 ---r~~~i~g~~l~vvG~Iv~atA~-~~~~~iag~~l~GvgaG~~-~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~ 182 (599)
T PF06609_consen 108 ---RYFFIIGSLLGVVGSIVCATAQ-NMNTFIAGMVLYGVGAGVQ-ELAALAISELVPNKWRGLGLAIASIPFIITTWIS 182 (599)
T ss_pred ---hHHHHHHHHHHHhHHHHhhcCC-cHHHHHHHHHHHHHhhHHH-HHHHHHHHHhcccchhhhHhHHHHHHHHhhhccc
Confidence 4666666666666655554433 3455666777778876643 3444456777888999888877665544555567
Q ss_pred HHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhc
Q 014698 373 VALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAF 408 (420)
Q Consensus 373 ~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (420)
|.+...+..+ ++|++.|++..+...++.+..++++
T Consensus 183 ~~ia~~~~~~-~~WRw~~~~~~i~~~i~~vl~~~fY 217 (599)
T PF06609_consen 183 PLIAQLFAAH-SGWRWIFYIFIIWSGIALVLIFFFY 217 (599)
T ss_pred HHHHHHhccC-CCcchHHHHHHHHHHHHHHHHHHHh
Confidence 7776666555 5899999998877666655544433
No 213
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.96 E-value=5e-08 Score=91.12 Aligned_cols=159 Identities=10% Similarity=0.010 Sum_probs=96.6
Q ss_pred HHHhHHHHHHHhhhhhhHhhhhhC---CCcchh---hHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHH
Q 014698 230 HFCGSWGHYTCLSWLPTYFSEELS---LNLTEA---AWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAF 303 (420)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~g---~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~ 303 (420)
.++...-...+....| ++.++++ .+..+. +...+...++..+++++.|+++||+||| ..+..+.
T Consensus 31 ~~~~~~d~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr---------~~l~~~~ 100 (432)
T PRK10406 31 NLVEWFDFYVYSFCSL-YFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRK---------KSMLISV 100 (432)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcH---------HHHHHHH
Confidence 4443444444333444 5555553 344432 3334445556669999999999999964 3333444
Q ss_pred HHhHHHHHHHhhcCCCc-------HHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHH
Q 014698 304 LSPAVCMTLSSIDLGLP-------HWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALT 376 (420)
Q Consensus 304 ~~~~~~~~~~~~~~~~~-------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~ 376 (420)
....+........++.. ....+.-++.|++.+...+.....+.|..|+++|+++.++.+.....|..+++.+.
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~ 180 (432)
T PRK10406 101 CMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVV 180 (432)
T ss_pred HHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHH
Confidence 44444333333322211 12333446788888877888888888888999999999998877777777777665
Q ss_pred HHHhcc-------CCceeeeehhhhHHHH
Q 014698 377 GYLLDS-------THSWSMSLFAPSIFFY 398 (420)
Q Consensus 377 g~l~~~-------~~~~~~~~~~~~~~~~ 398 (420)
..+... ..+|+..|.+.++..+
T Consensus 181 ~~~~~~~~~~~~~~~gWr~~F~i~~~~~l 209 (432)
T PRK10406 181 VVLQQTLEDAELREWGWRIPFALGAVLAV 209 (432)
T ss_pred HHHHHhCCHHHHhccchHHHHHHHHHHHH
Confidence 544321 2378888877555443
No 214
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.96 E-value=3.2e-08 Score=94.22 Aligned_cols=118 Identities=10% Similarity=0.014 Sum_probs=86.2
Q ss_pred CCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCC-----cHHHHHHHH
Q 014698 254 LNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGL-----PHWEIVGIL 328 (420)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 328 (420)
.+..+.+++.+...++.+++.++.|++.||+||| ..+..+.+...+...+.....+. .....+.-+
T Consensus 53 ~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr---------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~ 123 (502)
T TIGR00887 53 LPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRK---------RVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRF 123 (502)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccH---------HHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHH
Confidence 4455678888999999999999999999999964 33333333333332222222211 133445557
Q ss_pred HHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHh
Q 014698 329 TAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLL 380 (420)
Q Consensus 329 ~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 380 (420)
+.|++.+...+.......+..|+++|+++.++.+....+|..+++.+...+.
T Consensus 124 l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~ 175 (502)
T TIGR00887 124 WLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVL 175 (502)
T ss_pred HHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8889888888888888888899999999999999999999999998877654
No 215
>PTZ00207 hypothetical protein; Provisional
Probab=98.95 E-value=5.7e-08 Score=92.04 Aligned_cols=162 Identities=11% Similarity=0.009 Sum_probs=101.1
Q ss_pred HHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHh
Q 014698 235 WGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSS 314 (420)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (420)
...+.+..+.|. +++.+|+|..+.+.+.+.. .......++.|++.||+|+| ..+..+.+...++..+..
T Consensus 41 g~~y~fsv~s~~-L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R---------~vllig~ll~~iG~ll~a 109 (591)
T PTZ00207 41 SFMYAFNLISGA-MQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPR---------PIFVLSMTVFCLGTLLFA 109 (591)
T ss_pred HHHHHHHHHHHH-HHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcH---------HHHHHHHHHHHHHHHHHH
Confidence 334455555565 4666899999999887653 33345666789999999963 444444444444444433
Q ss_pred hcC-----CCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeee
Q 014698 315 IDL-----GLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMS 389 (420)
Q Consensus 315 ~~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~ 389 (420)
... .+.+...+...+.|.+.+...........+.+ |++||++.|+......+|+++.+.+...+.+. ++...
T Consensus 110 la~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~F-p~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~--~~~~~ 186 (591)
T PTZ00207 110 LTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVF-PSNRGAVVAIMKTFTGLGSAILGSIQLAFFSD--NTSAY 186 (591)
T ss_pred HHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hHHHH
Confidence 321 22333444456667776655555555555555 58899999999999999998655555555432 45556
Q ss_pred ehhhhHHHHHHHHHHhhhccC
Q 014698 390 LFAPSIFFYLTGTIVWLAFAS 410 (420)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~ 410 (420)
+++.++...+..++.+.+.+.
T Consensus 187 fl~l~vl~~vv~ll~~~~vr~ 207 (591)
T PTZ00207 187 FFFLMSFALVVGILAIVFMRL 207 (591)
T ss_pred HHHHHHHHHHHHHHHHhheeC
Confidence 666666666655555554443
No 216
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.93 E-value=4.4e-09 Score=101.98 Aligned_cols=140 Identities=12% Similarity=0.103 Sum_probs=99.6
Q ss_pred HHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHH
Q 014698 234 SWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLS 313 (420)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (420)
.....++....-.-++++++++..+.|++.+...++..++.++.+++.||.+|++ + +..+.++.++..++.
T Consensus 45 ~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~--------~-i~~g~ll~~lg~ll~ 115 (633)
T TIGR00805 45 GLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPI--------V-IGIGCAIMGLGSFLL 115 (633)
T ss_pred HHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcce--------E-EEecHHHHHHHHHHH
Confidence 3333344443334456678999999999999999999999999999999999652 2 222222222222222
Q ss_pred hhcC-------------------------------------------------C-CcHHHHHHHHHHHHHhhhhhhhhhh
Q 014698 314 SIDL-------------------------------------------------G-LPHWEIVGILTAGLALSSFALSGLY 343 (420)
Q Consensus 314 ~~~~-------------------------------------------------~-~~~~~~~~~~~~g~~~~~~~~~~~~ 343 (420)
..+. . ....+++.-++.|++.+...+....
T Consensus 116 alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~ 195 (633)
T TIGR00805 116 SLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGIS 195 (633)
T ss_pred hChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCch
Confidence 2110 0 0122334557888888877777777
Q ss_pred hhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhcc
Q 014698 344 CTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDS 382 (420)
Q Consensus 344 ~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 382 (420)
.+.+.+|+++|+...|+.+....+|..+|+.+++.+.+.
T Consensus 196 ~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~ 234 (633)
T TIGR00805 196 YIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQI 234 (633)
T ss_pred hhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhc
Confidence 787888999999999999999999999999999998864
No 217
>PRK09669 putative symporter YagG; Provisional
Probab=98.88 E-value=2.8e-08 Score=93.12 Aligned_cols=153 Identities=8% Similarity=0.041 Sum_probs=96.6
Q ss_pred HHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHH
Q 014698 226 MIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLS 305 (420)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~ 305 (420)
..+..+..+........+++.|+.+.+|+++.++|.+..+.-+...+..++.|.++||.+.|.-+ |+..+..+...
T Consensus 14 yg~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Gr----rrp~il~~~~~ 89 (444)
T PRK09669 14 YGLGDTACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQ----FRPYLLWFAIP 89 (444)
T ss_pred hcchhhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCC----cchhHHHHHHH
Confidence 33444444555566677899999999999999999999999999999999999999995432111 23333333333
Q ss_pred hHHHHHHHhhcCCC-----cHHHHHHHHHHHHHhhhhhhhhhhhhhhcc-CccchHHHHHHHHHhhhhhHHHHHHHHHHH
Q 014698 306 PAVCMTLSSIDLGL-----PHWEIVGILTAGLALSSFALSGLYCTHQDI-SPEYASILLGITNTVGAVPGIVGVALTGYL 379 (420)
Q Consensus 306 ~~~~~~~~~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l 379 (420)
.++...+....++. ..+..+...+.+.+......+......+.. ++++|++..+.......+|+.+++.+...+
T Consensus 90 ~~i~~~l~f~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl 169 (444)
T PRK09669 90 FGVVCLLTFYTPDFGATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPL 169 (444)
T ss_pred HHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222222222221 122233334445555545544444444443 458899999998888889888888766655
Q ss_pred hcc
Q 014698 380 LDS 382 (420)
Q Consensus 380 ~~~ 382 (420)
...
T Consensus 170 ~~~ 172 (444)
T PRK09669 170 VDI 172 (444)
T ss_pred HHH
Confidence 543
No 218
>PRK09952 shikimate transporter; Provisional
Probab=98.87 E-value=1.2e-07 Score=88.54 Aligned_cols=163 Identities=8% Similarity=0.016 Sum_probs=100.0
Q ss_pred HHHHHHHHHhHHHHHHHhhhhhhHhhhhh--CCCcchhhHHH-----HhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHH
Q 014698 224 WAMIYAHFCGSWGHYTCLSWLPTYFSEEL--SLNLTEAAWVS-----ILPPLASVLVTSIAAQFADNLIATGVETTMVRK 296 (420)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~-----~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~ 296 (420)
....+..++...-........|.+..+.+ +.++. .+... ....++..+++++.|++.||+|||
T Consensus 25 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr--------- 94 (438)
T PRK09952 25 LGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRK--------- 94 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccH---------
Confidence 33344444444444444445555555443 55655 34432 233345668888899999999964
Q ss_pred HHHHHHHHHhHHHHHHHhhcCCCcH-------HHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhH
Q 014698 297 ICQTIAFLSPAVCMTLSSIDLGLPH-------WEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPG 369 (420)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~ 369 (420)
..+..+.....+...+....++... .....-++.|++.+...+.......|..|+++|+...+..+....+|.
T Consensus 95 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~ 174 (438)
T PRK09952 95 RMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGL 174 (438)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHH
Confidence 3334444444444444444333211 123333677888887777777777788899999999999988888888
Q ss_pred HHHHHHHHHHhcc-------CCceeeeehhhhHH
Q 014698 370 IVGVALTGYLLDS-------THSWSMSLFAPSIF 396 (420)
Q Consensus 370 ~~~~~~~g~l~~~-------~~~~~~~~~~~~~~ 396 (420)
.+++.+...+... ..+|+..|.+.++.
T Consensus 175 ~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~ 208 (438)
T PRK09952 175 LLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVL 208 (438)
T ss_pred HHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHH
Confidence 8888777665532 13788788776544
No 219
>TIGR00898 2A0119 cation transport protein.
Probab=98.84 E-value=2.4e-08 Score=95.33 Aligned_cols=129 Identities=18% Similarity=0.001 Sum_probs=103.0
Q ss_pred hHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchH--HHHHHHHHHHHhccccchhhhHHHHHhcCCccccchh
Q 014698 48 NLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFM--PGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRA 125 (420)
Q Consensus 48 ~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 125 (420)
..+.++.+.+.||.+||+.+..+.++.+++.++..+ .++. +...+.-++.+++.+..++....+.+|.+|++.|+++
T Consensus 369 i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~ 447 (505)
T TIGR00898 369 LPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLF-VPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLG 447 (505)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhh
Confidence 345677777899999999999999888888777665 4432 4455566677777777788889999999999999999
Q ss_pred hHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcc
Q 014698 126 VSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGET 179 (420)
Q Consensus 126 ~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~ 179 (420)
+|+.+....+|.+++|.+.+ +. ..++..++.+.+...++..+...++||++.
T Consensus 448 ~g~~~~~~~ig~~i~p~i~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~lpet~~ 499 (505)
T TIGR00898 448 VGVCSTMARVGSIISPFLVY-LG-EKWLFLPLVLFGGLALLAGILTLFLPETKG 499 (505)
T ss_pred HhHHHHHHHHHHHHHhHHHH-HH-HHHHhhHHHHHHHHHHHHHHHHHcCcCCCC
Confidence 99999999999999999988 43 446778888888887777777778887653
No 220
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.82 E-value=8.2e-08 Score=90.68 Aligned_cols=149 Identities=11% Similarity=0.091 Sum_probs=98.2
Q ss_pred HHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhh----hhcCcchHHHHHHHHH
Q 014698 225 AMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNL----IATGVETTMVRKICQT 300 (420)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~----~~~~~~~~~~~~~~~~ 300 (420)
...+..+..+........+++.|+.+..|+++..+|.+....-+...+..++.|.++||. ||| |.++ .
T Consensus 10 ~yg~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grr-------rp~i-l 81 (473)
T PRK10429 10 SYGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKF-------KPWI-L 81 (473)
T ss_pred hhccchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCc-------chhH-h
Confidence 344444555666677778999999999999999999999999999999999999999954 664 3333 3
Q ss_pred HHHHHhHHHHHHHhhcCCCc-----HHHHHHHHHHHHHhhhhhhhhhhhhhhcc-CccchHHHHHHHHHhhhhhHHHHHH
Q 014698 301 IAFLSPAVCMTLSSIDLGLP-----HWEIVGILTAGLALSSFALSGLYCTHQDI-SPEYASILLGITNTVGAVPGIVGVA 374 (420)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~~g~~~~~~ 374 (420)
.+....++...+....++.+ .+..+..++...++.....+..+...+.. ++++|.+..+......++|+.+.+.
T Consensus 82 ~g~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~ 161 (473)
T PRK10429 82 IGTLANSVVLFLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAG 161 (473)
T ss_pred hhhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34344333333333322211 12222334445566555555555555555 5788999999877878888777766
Q ss_pred HHHHHhc
Q 014698 375 LTGYLLD 381 (420)
Q Consensus 375 ~~g~l~~ 381 (420)
+...+.+
T Consensus 162 ~~~~~~~ 168 (473)
T PRK10429 162 FTLPFVN 168 (473)
T ss_pred HHHHHHH
Confidence 6555443
No 221
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.81 E-value=6.5e-08 Score=89.58 Aligned_cols=151 Identities=16% Similarity=0.123 Sum_probs=116.2
Q ss_pred hhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCc-HHHHHHHH
Q 014698 250 EELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLP-HWEIVGIL 328 (420)
Q Consensus 250 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 328 (420)
+.+.++..+-+++.+....+.+++.+..|++.||+|.| +. ...+.+..++..++.....+.. +..++.=+
T Consensus 66 ~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r--------~v-~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~ 136 (466)
T KOG2532|consen 66 GEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGAR--------RV-FFISGLISALLTLLTPLAASIGFYLLLVLRF 136 (466)
T ss_pred ceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCch--------HH-HHHHHHHHHHHHHHHHHHHHhcchhhHHHHH
Confidence 35788899999999999999999999999999999964 33 3334344344433333332222 33344448
Q ss_pred HHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhc
Q 014698 329 TAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAF 408 (420)
Q Consensus 329 ~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (420)
+.|++.+...+.......+-.|+++|++..++.....++|.+++-++.|.+-+...||...|++.+++.++..++.+.+.
T Consensus 137 lqGl~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~ 216 (466)
T KOG2532|consen 137 LQGLGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFY 216 (466)
T ss_pred HhHHHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHh
Confidence 88999998888888888888999999999999999999999999999999999855899999999887776665544443
Q ss_pred c
Q 014698 409 A 409 (420)
Q Consensus 409 ~ 409 (420)
.
T Consensus 217 ~ 217 (466)
T KOG2532|consen 217 S 217 (466)
T ss_pred c
Confidence 3
No 222
>PRK11462 putative transporter; Provisional
Probab=98.80 E-value=2e-07 Score=87.54 Aligned_cols=156 Identities=7% Similarity=-0.007 Sum_probs=102.5
Q ss_pred HHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHH
Q 014698 225 AMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFL 304 (420)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 304 (420)
...+..+..+........|+..|+.+..|+++..+|.+..+.-+...+.-++.|.++||...|.-+ |+..+..+..
T Consensus 13 ~Yg~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr----~rp~il~g~i 88 (460)
T PRK11462 13 GYGMGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGK----FRPWVLFGAL 88 (460)
T ss_pred hhccchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCC----cchhHhHHHH
Confidence 333444444556666677899999999999999999999999999999999999999986433111 3333333433
Q ss_pred HhHHHHHHHhhcCCCc-----HHHHHHHHHHHHHhhhhhhhhhhhhhhcc-CccchHHHHHHHHHhhhhhHHHHHHHHHH
Q 014698 305 SPAVCMTLSSIDLGLP-----HWEIVGILTAGLALSSFALSGLYCTHQDI-SPEYASILLGITNTVGAVPGIVGVALTGY 378 (420)
Q Consensus 305 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~~g~~~~~~~~g~ 378 (420)
..++...+.+..++.. .+..+...++..++.....+..+...+.. ++++|++..+.......+|..+++.+...
T Consensus 89 ~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~p 168 (460)
T PRK11462 89 PFGIVCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMP 168 (460)
T ss_pred HHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333333222211 22333334456666655555555555544 36889999999999999998888887766
Q ss_pred HhccCC
Q 014698 379 LLDSTH 384 (420)
Q Consensus 379 l~~~~~ 384 (420)
+.+..|
T Consensus 169 lv~~~g 174 (460)
T PRK11462 169 LVNLIG 174 (460)
T ss_pred HHHHhC
Confidence 665443
No 223
>PRK15075 citrate-proton symporter; Provisional
Probab=98.79 E-value=2.6e-07 Score=86.38 Aligned_cols=160 Identities=11% Similarity=0.043 Sum_probs=100.9
Q ss_pred HHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHH-HHhh-----HHHHHHHHHhhhhhhhhhhhcCcchHHHHH
Q 014698 223 VWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWV-SILP-----PLASVLVTSIAAQFADNLIATGVETTMVRK 296 (420)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~-----~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~ 296 (420)
.....+..++...-...+....|...++ ++.++.+.+.. .+.. .+...+++++.|++.||+|||
T Consensus 17 ~~~~~~~~~~~~~d~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr--------- 86 (434)
T PRK15075 17 ILRVTSGNFLEMFDFFLFGFYATAIAKT-FFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRR--------- 86 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchH---------
Confidence 4445556666666666677777766554 68776664433 2221 222346788999999999964
Q ss_pred HHHHHHHHHhHHHHHHHhhcCCCcH-------HHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhH
Q 014698 297 ICQTIAFLSPAVCMTLSSIDLGLPH-------WEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPG 369 (420)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~ 369 (420)
..+..+.....+...+....++... ...+.-++.|++.+...+.......+.+|+++|+++.++.+...++|.
T Consensus 87 ~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~ 166 (434)
T PRK15075 87 KGLIVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAV 166 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHH
Confidence 3333343444443333333332111 123344667777776666666667788999999999999999888888
Q ss_pred HHHHHHHHHHh--------ccCCceeeeehhh
Q 014698 370 IVGVALTGYLL--------DSTHSWSMSLFAP 393 (420)
Q Consensus 370 ~~~~~~~g~l~--------~~~~~~~~~~~~~ 393 (420)
.+++.+++.+. +.. +|+..|++.
T Consensus 167 ~~g~~~g~~l~~~~~~~~~~~~-gWr~~f~~~ 197 (434)
T PRK15075 167 VFAALLGYLLNQWLSPAQMAEW-GWRIPFLIG 197 (434)
T ss_pred HHHHHHHHHHHHhCCHHHHhcc-chHHHHHHH
Confidence 88887777653 333 677777663
No 224
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.78 E-value=1.8e-07 Score=87.96 Aligned_cols=183 Identities=17% Similarity=0.087 Sum_probs=114.1
Q ss_pred cHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHH
Q 014698 220 SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQ 299 (420)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~ 299 (420)
++........++..... +.....++.++++.+|.|+.+.+.+.+...+...+-.+ .|.++||++..+.+ |+..+
T Consensus 25 ~~~~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~r----Rr~~l 98 (468)
T TIGR00788 25 RVVLAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYT----KRWYL 98 (468)
T ss_pred chHHHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCcc----chHHH
Confidence 34444555567777776 66677888888888899999998888888888877544 99999999621111 44444
Q ss_pred HHHHHHh-HHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHH---HHHHHHHhhhhhHHHHHHH
Q 014698 300 TIAFLSP-AVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASI---LLGITNTVGAVPGIVGVAL 375 (420)
Q Consensus 300 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~---~~g~~~~~~~~g~~~~~~~ 375 (420)
....+.. ...+.......+........+++.+++.+......-..+.+..+ |+++. ..+.......+|..+++.+
T Consensus 99 ~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l 177 (468)
T TIGR00788 99 VLSGLLGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLL 177 (468)
T ss_pred HHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHH
Confidence 4444333 23222222222222222334455666666555666666666665 44333 3334444456899999999
Q ss_pred HHHHhccCCceeeeehhhhHHHHHHHHHHhhhccCC
Q 014698 376 TGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASS 411 (420)
Q Consensus 376 ~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (420)
.|.+.+.. +++..|++.+...++. .+.....+|+
T Consensus 178 ~G~l~~~~-~~~~~f~~~a~l~ll~-~~~~~~~~E~ 211 (468)
T TIGR00788 178 GGPLLDKT-LTRILFLITAALLLLQ-LFVSNLSKER 211 (468)
T ss_pred HHHHHHhc-CcchHHHHHHHHHHHH-HHHHHhcccc
Confidence 99999886 7888888877665555 3334444544
No 225
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.77 E-value=1.1e-07 Score=88.58 Aligned_cols=135 Identities=17% Similarity=0.035 Sum_probs=112.5
Q ss_pred hhHHhHHhhhhcchhhhcchh--HHHHHHHHHHHHHHHHHHHh--------hchHHHHHHHHHHHHhccccchhhhHHHH
Q 014698 44 LKDTNLLELLRLPLLFVTWIR--KVLQTGVLIWSLATALLPLL--------AGFMPGLVLSRVLVGIGEGVSPSAATDLI 113 (420)
Q Consensus 44 ~~~~~~~~l~~~p~~~~~~~r--~~~~~~~~~~~~~~~~~~~~--------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i 113 (420)
......|+++.+.+.||.+.| +++..+++.+.+..+... + .++.+.+.+.-++.|+..|..++...++.
T Consensus 327 ~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~-~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~ 405 (477)
T PF11700_consen 327 QIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGL-FGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLF 405 (477)
T ss_pred HHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHH-HHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 334445688888889999977 888888888765554432 3 46678899999999999999999999999
Q ss_pred HhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccc-hhHHHHHHHHHHHHHHHHhhhcccCcc
Q 014698 114 ARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG-WESVFYIFGLLGIAWFSGFKILQEGET 179 (420)
Q Consensus 114 ~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g-wr~~f~~~~~~~~~~~~~~~~~~~~~~ 179 (420)
+|..|+++.+..+|++....-....+||++.+.+.+..| -|..+....++.++.+++.++++.++.
T Consensus 406 ~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v~~~~g 472 (477)
T PF11700_consen 406 SRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFVDVEKG 472 (477)
T ss_pred HHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccchhh
Confidence 999999999999999999999999999999999998776 889988888888777777677666543
No 226
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.76 E-value=4.4e-07 Score=82.94 Aligned_cols=139 Identities=17% Similarity=0.158 Sum_probs=88.1
Q ss_pred HHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHH
Q 014698 225 AMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFL 304 (420)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 304 (420)
.+...++++.+.......++|.|+++. |+|..|+|.+.+...+..+++.++.|.++||.+++ ++... ...+
T Consensus 6 rLs~~~f~~f~~~G~~~p~~~~~L~~~-G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~-------~~~l~-~~~l 76 (400)
T PF03825_consen 6 RLSLMYFLYFFAYGAFLPYLPLYLESR-GFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSA-------KRILA-LLSL 76 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhH-------HHHHH-HHHH
Confidence 344566666777777888999999985 89999999999999999999999999999998764 44433 3333
Q ss_pred HhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHH
Q 014698 305 SPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVAL 375 (420)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~ 375 (420)
..++.+...... ++........++..++.....+...+...+... +++.-.|-....+.+|-+++...
T Consensus 77 ~~~~~~~~~~~~-~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~ 144 (400)
T PF03825_consen 77 LSALALLLLAFS-SSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALA 144 (400)
T ss_pred HHHHHHHHHHHh-ccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHH
Confidence 333333333332 223344444445555555444444444444332 33444555566666666666544
No 227
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=98.74 E-value=9.5e-08 Score=81.57 Aligned_cols=309 Identities=12% Similarity=0.023 Sum_probs=177.3
Q ss_pred hhhhcchhhhcch-hHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCccccchhhHHH
Q 014698 51 ELLRLPLLFVTWI-RKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFV 129 (420)
Q Consensus 51 ~l~~~p~~~~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~ 129 (420)
.++-..++.|+-| |++++.-.+.....-.+. .+.++.+.+=+.-+..|...+ ...+.++++=+.++|+++.++.+..
T Consensus 58 ~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~l-v~g~sV~~mQvlE~FyG~~tA-aEIAYysYIYs~Vd~~~Yqrvt~y~ 135 (433)
T KOG3810|consen 58 GLVPVFLLTDYLRYKPVVVLQALSGVPVWIML-VFGPSVKAMQVLEFFYGPATA-AEIAYYSYIYSKVDPEMYKRVTGYC 135 (433)
T ss_pred HHHHHHHHhhhhhcceeeeeeccchhHHHHHH-HhcCCchheeeehhhcChHHH-HHHhhhheeeeecCHHHHHHHHHHh
Confidence 3443444555554 444433322222222222 248888888888889898754 4456688898999999999999999
Q ss_pred HhhhhhHHHHHHhhHHHhhhccc--hhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhhhhhhhh--hhhh-
Q 014698 130 FGGLSFGSVAGLLLAPPIIENLG--WESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSA--SLEE- 204 (420)
Q Consensus 130 ~~~~~~g~~~g~~l~~~l~~~~g--wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~- 204 (420)
.+..-.|...|..++..+.+.-. .+..=.+......+......++|+.++..--+..+++....+.++... +..+
T Consensus 136 RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~rSl~f~~~~~~~~v~~~e~~~~~~~~~~~ 215 (433)
T KOG3810|consen 136 RAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRVKRSLYFHRLEDKISVGDLEEMNPQASYMSY 215 (433)
T ss_pred HHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCCchhhhhhcccccceeccchhcCccchhhHH
Confidence 99999999999999888876432 333223333333344556667777663211111111110000000000 0000
Q ss_pred h--cccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhh-CCCcchhhHHHHhhHHHHHHHHHhhhhhh
Q 014698 205 M--GESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEEL-SLNLTEAAWVSILPPLASVLVTSIAAQFA 281 (420)
Q Consensus 205 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~g~l~ 281 (420)
. ....-..++.+..+||++..-.+-..+...+++....+.-..-.+.- +-.....|..=++..+.++++.+..|.+.
T Consensus 216 l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~~~~~~vyNG~veAv~tlLGa~~~~~~g~l~ 295 (433)
T KOG3810|consen 216 LRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVAPNPANVYNGAVEAVSTLLGAIAALAAGYLN 295 (433)
T ss_pred HHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhCCCchhhhcCHHHHHHHHHHHHHHHHHHhee
Confidence 0 00001123445667888888777777878888888777766666542 11112234455566667777778888776
Q ss_pred hhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHH
Q 014698 282 DNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGIT 361 (420)
Q Consensus 282 dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 361 (420)
-++.|. +..++..+....+.++++... .++.++.....+++...+....+.....+......|.-|..+|+.
T Consensus 296 i~w~r~-------g~~ll~~~s~~~agllf~m~~-t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~gLvFGiN 367 (433)
T KOG3810|consen 296 INWNRW-------GDLLLAVGSAVQAGLLFIMAQ-TQHIWVCYAGYVLFRVIYQLTITIATFQIARNLSSELFGLVFGIN 367 (433)
T ss_pred eccchh-------hHHHHHHHHHHhhhhhhhhhc-ccceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhheeeeehH
Confidence 655543 556666665554444444433 333455555556666666555555555566777888889999997
Q ss_pred HHhhhhhH
Q 014698 362 NTVGAVPG 369 (420)
Q Consensus 362 ~~~~~~g~ 369 (420)
.++.-+-.
T Consensus 368 TFvAl~lQ 375 (433)
T KOG3810|consen 368 TFVALILQ 375 (433)
T ss_pred HHHHHHHH
Confidence 76554433
No 228
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.74 E-value=4.9e-05 Score=70.39 Aligned_cols=225 Identities=10% Similarity=-0.028 Sum_probs=130.6
Q ss_pred hhhcchhhhcchhHHHHHHHHHHHHHHHHHHHh----hc--------------------------hHHHHHHHHHHHHhc
Q 014698 52 LLRLPLLFVTWIRKVLQTGVLIWSLATALLPLL----AG--------------------------FMPGLVLSRVLVGIG 101 (420)
Q Consensus 52 l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~----~~--------------------------~~~~l~~~r~l~G~~ 101 (420)
.+...+.++..|++++-.....+.....+.++. .+ +.|...+.-+...+-
T Consensus 62 ~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw 141 (472)
T TIGR00769 62 LIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELW 141 (472)
T ss_pred HHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHH
Confidence 334444777778888777766666665555442 00 123333444444444
Q ss_pred cccchh-hhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhh--------ccchh----HHHHHHHHHHHHHH
Q 014698 102 EGVSPS-AATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE--------NLGWE----SVFYIFGLLGIAWF 168 (420)
Q Consensus 102 ~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~--------~~gwr----~~f~~~~~~~~~~~ 168 (420)
...... .-..+++|.++.+|-.|..++...+.++|.++++.+..++.+ ...|. ..+.+.++.+.+..
T Consensus 142 ~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~ 221 (472)
T TIGR00769 142 GSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSKLRASLGPGVDGWHVSLKNLMVIVICSGLAII 221 (472)
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccChHHHHHHHHHHHHHHHHHHHH
Confidence 444444 567889999999999999999999999999999999888773 11342 23333444444444
Q ss_pred HHhhhcccCcccCCCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHh
Q 014698 169 SGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYF 248 (420)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (420)
.+.+++.+....++.. .+.++ +..++..+......++.++|+|.++...+...+++.....+..-.-..+
T Consensus 222 ~~~~~l~~~~~~~~~~-~~~~~---------~~~k~k~k~~~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v 291 (472)
T TIGR00769 222 LLYWWVNRNVLTDPRS-YNPAL---------KEKKVKPKMSTMESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKL 291 (472)
T ss_pred HHHHHHHhcccCCccc-cchhh---------ccccCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444443322111100 00000 0000011111234467789999998888888877777666665444555
Q ss_pred hhhhCCCcchh---hHHHHhhHHHHHHHHHhhhhhhhhhhh
Q 014698 249 SEELSLNLTEA---AWVSILPPLASVLVTSIAAQFADNLIA 286 (420)
Q Consensus 249 ~~~~g~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~~~ 286 (420)
.+.+..+.+.. |.+....++..++.+++.+++.+|+|-
T Consensus 292 ~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw 332 (472)
T TIGR00769 292 KAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGW 332 (472)
T ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 55543222222 334455566666667777888898884
No 229
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.72 E-value=3.8e-08 Score=91.81 Aligned_cols=172 Identities=12% Similarity=0.066 Sum_probs=113.5
Q ss_pred HHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhh----hhhhcCcchHHHHHHHHHHHHHHh
Q 014698 231 FCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFAD----NLIATGVETTMVRKICQTIAFLSP 306 (420)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~~~~~~~~~~~~~~~~~~~~~~~ 306 (420)
+...........+++.|+.+..|.++...|.+.....+..++..++.|.++| |+||| +..+..+....
T Consensus 11 ~~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grr--------rp~~l~g~i~~ 82 (428)
T PF13347_consen 11 LGYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRR--------RPWILIGAILL 82 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeeccccccc--------ceEeehhhHHH
Confidence 3444555556678888999999999999999999999999999999999999 67764 33333444444
Q ss_pred HHHHHHHhhc-C-CCc-----HHHHHHHHHHHHHhhhhhhhhhhhhhhccC-ccchHHHHHHHHHhhhhhHHHHHHHHHH
Q 014698 307 AVCMTLSSID-L-GLP-----HWEIVGILTAGLALSSFALSGLYCTHQDIS-PEYASILLGITNTVGAVPGIVGVALTGY 378 (420)
Q Consensus 307 ~~~~~~~~~~-~-~~~-----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~g~~~~~~~~g~ 378 (420)
++...+.... + +.. .+..+..+++..+......+......+..+ +++|.+..+..+....+|..+.+.+.+.
T Consensus 83 ~~~~~llf~~~p~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~ 162 (428)
T PF13347_consen 83 ALSFFLLFSPPPAGLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPI 162 (428)
T ss_pred HHHHHHhhccccchhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhh
Confidence 4443333332 2 111 123334455566666555555555555554 5789999999999999999888888888
Q ss_pred HhccCC------ceeeeehhhhHHHHHHHHHHhhhccC
Q 014698 379 LLDSTH------SWSMSLFAPSIFFYLTGTIVWLAFAS 410 (420)
Q Consensus 379 l~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (420)
+.+..+ ++.....+.+++..+...+.....+|
T Consensus 163 l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 163 LVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKE 200 (428)
T ss_pred hhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeee
Confidence 776554 34444455455444444444444455
No 230
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.67 E-value=2.3e-07 Score=81.98 Aligned_cols=143 Identities=17% Similarity=0.047 Sum_probs=115.7
Q ss_pred ccccccchhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHH
Q 014698 34 LRIGRRGRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLI 113 (420)
Q Consensus 34 ~~~g~~~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i 113 (420)
......+.........++++.+.+-+|.+.|+++..++++..+.++..-+ ......+.++-.+.|...|..+..+.++.
T Consensus 288 ~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~-~~~~~~f~i~gll~g~s~G~~qA~SRSy~ 366 (438)
T COG2270 288 TELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIF-LEGELDFWILGLLVGTSLGGAQASSRSYL 366 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHH-ccccHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 34444555555666678889998899999999999999999998877654 55566788888999999999999999999
Q ss_pred HhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccc-hhHHHHHHHHHHHHHHHHhhhcccC
Q 014698 114 ARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG-WESVFYIFGLLGIAWFSGFKILQEG 177 (420)
Q Consensus 114 ~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g-wr~~f~~~~~~~~~~~~~~~~~~~~ 177 (420)
++.+|++|-++.+|+++...-.+..+||.+.+.+.+..| -|..+....++..+-++....+|++
T Consensus 367 ~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 367 ARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred HHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEeecCC
Confidence 999999999999999999999999999999998887554 5666666665555555555555554
No 231
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.67 E-value=5.7e-07 Score=82.87 Aligned_cols=121 Identities=12% Similarity=0.112 Sum_probs=78.4
Q ss_pred HHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcH-------HHHHHHHHHHHHhhhhhhh
Q 014698 268 LASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPH-------WEIVGILTAGLALSSFALS 340 (420)
Q Consensus 268 ~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~g~~~~~~~~~ 340 (420)
+...+++++.|+++||+||| ..+..+.....+...+....++... ...+.-++.|++.+...+.
T Consensus 46 ~~~~i~~~~~G~l~dr~g~r---------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~ 116 (394)
T TIGR00883 46 LARPLGAIVFGHFGDRIGRK---------KTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGG 116 (394)
T ss_pred HHhhhHHHHhhhhhhhhhhH---------HHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccc
Confidence 34456889999999999963 3333444444444443333332211 2333346667777766666
Q ss_pred hhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhcc-------CCceeeeehhhhHHH
Q 014698 341 GLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDS-------THSWSMSLFAPSIFF 397 (420)
Q Consensus 341 ~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~-------~~~~~~~~~~~~~~~ 397 (420)
......+..|+++|++..+..+....+|..+++.+.+.+.+. ..+|+..+.+.+...
T Consensus 117 ~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 180 (394)
T TIGR00883 117 AALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLV 180 (394)
T ss_pred cHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHH
Confidence 667777888999999999999999999999999887765431 125666666654433
No 232
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.64 E-value=1.2e-06 Score=72.26 Aligned_cols=298 Identities=16% Similarity=0.098 Sum_probs=157.0
Q ss_pred cccccchhhhhHH---hHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHH
Q 014698 35 RIGRRGRIYLKDT---NLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATD 111 (420)
Q Consensus 35 ~~g~~~~l~~~~~---~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~ 111 (420)
-.|+++.++..+. +....+.+-+.|+-||||.-+.-++.+.++++-- .++.+..++++|.+-|+..+..+..--+
T Consensus 70 gkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCiTK--hSpqYkVLmVGR~LGGiaTsLLFSaFEs 147 (454)
T KOG4332|consen 70 GKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCITK--HSPQYKVLMVGRVLGGIATSLLFSAFES 147 (454)
T ss_pred cCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHHhh--cCCceEEEeehhhhhhHHHHHHHHHHHH
Confidence 3455555554433 3446666777899999997666666666555432 3788899999999999998887776655
Q ss_pred -HHHhcCCccccchhhHHHH--------hhhhhHHHHHHhhHHHhhhccc--hhHHHHHHHHHHHHH-HHHhhhcccCcc
Q 014698 112 -LIARSIPLEERSRAVSFVF--------GGLSFGSVAGLLLAPPIIENLG--WESVFYIFGLLGIAW-FSGFKILQEGET 179 (420)
Q Consensus 112 -~i~~~~~~~~r~~~~~~~~--------~~~~~g~~~g~~l~~~l~~~~g--wr~~f~~~~~~~~~~-~~~~~~~~~~~~ 179 (420)
+++|..+ +|+.-.-+.. .+..+-.+++.+.+..+.+.++ --.+|-..+.+..+. .+..--..|+-.
T Consensus 148 WliaEHne--kr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaigmAvil~~W~ENyg 225 (454)
T KOG4332|consen 148 WLIAEHNE--KRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIGMAVILSSWSENYG 225 (454)
T ss_pred HHHHHhhh--ccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHhhhhhccC
Confidence 4677653 3332222211 3344445566666666666554 334444433332221 122211222211
Q ss_pred cCCCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhh-hhhhHhhhhhCCCcch
Q 014698 180 SNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLS-WLPTYFSEELSLNLTE 258 (420)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~ 258 (420)
+.. ++ ++..++. +...+.+..++++.++..+..+.-...+.+.. |.|..--+..+. -
T Consensus 226 dps-~~----------kdlltqf--------~gaa~aiaSD~ki~LLG~iqsLFE~smytFVFLWTPaLspn~e~i---P 283 (454)
T KOG4332|consen 226 DPS-EN----------KDLLTQF--------KGAARAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEI---P 283 (454)
T ss_pred Chh-hh----------HHHHHHh--------hHhHHHHhcchHHHHHHHHHHHHhhhhheeeeeecccCCCCcccC---C
Confidence 111 00 0000000 00123455677777766666666666666554 666443222222 2
Q ss_pred hhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHH--Hhh--cC--CCcHHHHHHHHHHHH
Q 014698 259 AAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTL--SSI--DL--GLPHWEIVGILTAGL 332 (420)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~--~~~~~~~~~~~~~g~ 332 (420)
-|.+++.+.++.++|+-+..++..|-..| ......+.+......+.+ ... .+ .++....+.+..+-.
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s~~~-------ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~ 356 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRSSPK-------VESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEA 356 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcCCcc-------cchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHH
Confidence 46777777777777777766666554332 111112222222222211 111 11 223334455555666
Q ss_pred HhhhhhhhhhhhhhhccCccchHHHHHHHHHhh
Q 014698 333 ALSSFALSGLYCTHQDISPEYASILLGITNTVG 365 (420)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 365 (420)
+.|.+.+...-.-.+..|.+.|++.+-....--
T Consensus 357 cvGlfwPSimkmRsqyIPEearstimNfFRvPL 389 (454)
T KOG4332|consen 357 CVGLFWPSIMKMRSQYIPEEARSTIMNFFRVPL 389 (454)
T ss_pred HHhhcchHHHHHHHhhCCHHHHhhhhhheechh
Confidence 777667766666667788898987766554433
No 233
>PRK09848 glucuronide transporter; Provisional
Probab=98.63 E-value=8.5e-07 Score=83.34 Aligned_cols=139 Identities=8% Similarity=0.028 Sum_probs=82.8
Q ss_pred HHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHH-HHHHHH
Q 014698 224 WAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRK-ICQTIA 302 (420)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~-~~~~~~ 302 (420)
+...+..+..+........+++.|+++..|+++.++|.+.....+...+..++.|+++||.++|.-+ |+ ++....
T Consensus 11 ~~yg~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr----~~~~~~~~~ 86 (448)
T PRK09848 11 VGYSLGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGK----FRPFLLFGT 86 (448)
T ss_pred HhhccchHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcC----chHHHHHHH
Confidence 3333444445555556667778899999999999999999999999999999999999998654221 33 333333
Q ss_pred HHHhHHHHHHHhhcCC--C-c--HHHHHHHHHHHHHhhhhhhhhhhhhhhcc-CccchHHHHHHHHHhhh
Q 014698 303 FLSPAVCMTLSSIDLG--L-P--HWEIVGILTAGLALSSFALSGLYCTHQDI-SPEYASILLGITNTVGA 366 (420)
Q Consensus 303 ~~~~~~~~~~~~~~~~--~-~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~ 366 (420)
.........++....+ . . .+......+.+.+.+....+......+.. ++++|.+..+.......
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~ 156 (448)
T PRK09848 87 APLMIFSVLVFWVPTDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAAS 156 (448)
T ss_pred HHHHHHHHHHHhCcCCCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHH
Confidence 3233233332222111 1 1 12233334556666655555444433333 45678877666554333
No 234
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.59 E-value=1.8e-06 Score=78.72 Aligned_cols=158 Identities=11% Similarity=0.087 Sum_probs=113.0
Q ss_pred HHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHH
Q 014698 223 VWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIA 302 (420)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 302 (420)
-......-+..+........|+..|..|..|+++..+|.++.+.=+.-++.-++.|.++||..+|.-+ ++..+..+
T Consensus 14 ki~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~Gr----fRP~lL~g 89 (467)
T COG2211 14 KIGYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGR----FRPWLLWG 89 (467)
T ss_pred HHhhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeeccccccccc----ccHHHHHH
Confidence 34444555666667777788999999999999999999999999999999999999999987644222 44444444
Q ss_pred HHHhHHHHHHHhhcC-----CCcHHHHHHHHHHHHHhhhhhhhhhhhhhhcc-CccchHHHHHHHHHhhhhhHHHHHHHH
Q 014698 303 FLSPAVCMTLSSIDL-----GLPHWEIVGILTAGLALSSFALSGLYCTHQDI-SPEYASILLGITNTVGAVPGIVGVALT 376 (420)
Q Consensus 303 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~~g~~~~~~~~ 376 (420)
.+..++...+.+..+ ....+..+...++++++.....+..+...+.. ++++|.+..+.-.....+|..+...+.
T Consensus 90 ~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~ 169 (467)
T COG2211 90 AIPFAIVAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLF 169 (467)
T ss_pred hHHHHHHHHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 443333333333333 22344455557778888766666555555443 578999999999999999999888888
Q ss_pred HHHhccCC
Q 014698 377 GYLLDSTH 384 (420)
Q Consensus 377 g~l~~~~~ 384 (420)
+.+.+..+
T Consensus 170 ~plv~~~g 177 (467)
T COG2211 170 PPLVKLFG 177 (467)
T ss_pred HHHHHHhC
Confidence 88886654
No 235
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.59 E-value=2.4e-06 Score=79.61 Aligned_cols=152 Identities=11% Similarity=0.038 Sum_probs=116.4
Q ss_pred hhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHH
Q 014698 250 EELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILT 329 (420)
Q Consensus 250 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (420)
+..++...+.+...+.+.++.+++.+.++.+.||++- .+.+............+-.. .++.+..++.-++
T Consensus 74 edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~l--------s~~l~~~~~~w~~~~~~~~~--~~s~~~~ialr~l 143 (495)
T KOG2533|consen 74 EDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPL--------SKGLSVSGILWGLFGFLTAA--VHSFPGLIALRFL 143 (495)
T ss_pred cccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCCh--------HHHHHHHHHHHHHHHHHHHH--HhhhHHHHHHHHH
Confidence 4557778889999999999999999999999999983 33333333332333222222 2334445555688
Q ss_pred HHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhc-----cCCceeeeehhhhHHHHHHHHHH
Q 014698 330 AGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLD-----STHSWSMSLFAPSIFFYLTGTIV 404 (420)
Q Consensus 330 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~-----~~~~~~~~~~~~~~~~~~~~~~~ 404 (420)
.|++.+...|.....+..-+.+++|+.-+|+.+....+|+++|+.+...+.+ ...+|++.|++-+++.+..+++.
T Consensus 144 lGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~ 223 (495)
T KOG2533|consen 144 LGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVV 223 (495)
T ss_pred HHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheE
Confidence 9999998888888888888999999999999999999999999999988653 12489999999999888888877
Q ss_pred hhhccCC
Q 014698 405 WLAFASS 411 (420)
Q Consensus 405 ~~~~~~~ 411 (420)
++..+..
T Consensus 224 f~~lp~~ 230 (495)
T KOG2533|consen 224 FFFLPDN 230 (495)
T ss_pred EEEecCC
Confidence 7766643
No 236
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.56 E-value=2.5e-05 Score=68.26 Aligned_cols=153 Identities=13% Similarity=0.115 Sum_probs=96.1
Q ss_pred hhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHH
Q 014698 251 ELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTA 330 (420)
Q Consensus 251 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (420)
.+|++..+++.++........+...+.|.+.||+|| |+..+..+.+-...++.- ..++....++.=++.
T Consensus 63 ~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Gr--------k~~cl~~cily~~scl~k---~~~~~~~L~~GRvlg 131 (354)
T PF05631_consen 63 SYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGR--------KKACLLFCILYSLSCLTK---HSSNYPVLLLGRVLG 131 (354)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc--------hHHHHHHHHHHHHHHHHH---hccccHHHHHHHHHH
Confidence 579999999999999999999999999999999996 344444444444444321 122244444444666
Q ss_pred HHHhhhhhhhhhhhhh-----hccCccchHHHHHHHHHh-hhhhHHHHHHHHHHHhccCC-ceeeeehhhhHHHHHHHHH
Q 014698 331 GLALSSFALSGLYCTH-----QDISPEYASILLGITNTV-GAVPGIVGVALTGYLLDSTH-SWSMSLFAPSIFFYLTGTI 403 (420)
Q Consensus 331 g~~~~~~~~~~~~~~~-----~~~~~~~~g~~~g~~~~~-~~~g~~~~~~~~g~l~~~~~-~~~~~~~~~~~~~~~~~~~ 403 (420)
|++........-.... +.+|++..+...+..... ..+-.+.+..+.-.+.|..+ +...+|.....+..++.++
T Consensus 132 GiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~ 211 (354)
T PF05631_consen 132 GIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVL 211 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHH
Confidence 6666644443333322 235556566666655522 33445555556666666653 3567888877777777777
Q ss_pred HhhhccCCCCC
Q 014698 404 VWLAFASSKPQ 414 (420)
Q Consensus 404 ~~~~~~~~~~~ 414 (420)
+...++|+.++
T Consensus 212 I~~~W~ENyg~ 222 (354)
T PF05631_consen 212 ILKTWPENYGD 222 (354)
T ss_pred HHhcccccCCC
Confidence 66666666544
No 237
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.55 E-value=3.8e-05 Score=74.45 Aligned_cols=121 Identities=17% Similarity=0.178 Sum_probs=92.1
Q ss_pred hhhhcchhhhcc-hhHHHHHHHHHHHHHHHHHHHhhch--------HHHHHHHHHHHHhccccchhhhHHHHHhcCCcc-
Q 014698 51 ELLRLPLLFVTW-IRKVLQTGVLIWSLATALLPLLAGF--------MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLE- 120 (420)
Q Consensus 51 ~l~~~p~~~~~~-~r~~~~~~~~~~~~~~~~~~~~~~~--------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~- 120 (420)
.++++.+.|++. ++|.+.++.++..++..+.+. +.. ....+++-.+..+|.|+.-|...+...|.++++
T Consensus 40 pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai-~a~~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~ 118 (654)
T TIGR00926 40 PLIGAIIADGWLGKFKTILYLSIVYVVGHALLSF-GAIPSSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQ 118 (654)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh-ccCcccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccc
Confidence 445555566655 778888888888888877654 311 223566777888999999999999999999754
Q ss_pred --ccchhhHHHHhhhhhHHHHHHhhHHHhhhcc-------chhHHHHHHHHHHHHHHHHhh
Q 014698 121 --ERSRAVSFVFGGLSFGSVAGLLLAPPIIENL-------GWESVFYIFGLLGIAWFSGFK 172 (420)
Q Consensus 121 --~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-------gwr~~f~~~~~~~~~~~~~~~ 172 (420)
+|-+.+.++..+.++|+.+++.+.+++.+.. +|...|.+.++..++..+...
T Consensus 119 ~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~ 179 (654)
T TIGR00926 119 LSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFM 179 (654)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHH
Confidence 3677888999999999999999999887543 699999998888777554443
No 238
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=98.51 E-value=3.5e-06 Score=77.01 Aligned_cols=109 Identities=21% Similarity=0.282 Sum_probs=87.2
Q ss_pred HHHHHHHHHHHHHHHHHHHh--hchH------HHHHHHHHHHHhccccchhhhHHHHHhcCCcc---ccchhhHHHHhhh
Q 014698 65 KVLQTGVLIWSLATALLPLL--AGFM------PGLVLSRVLVGIGEGVSPSAATDLIARSIPLE---ERSRAVSFVFGGL 133 (420)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~--~~~~------~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~ 133 (420)
|++.++.++..+|.++.... .++. +.+.++-.+.++|.|+.-|...++.+|.++++ +|.+.+.++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 56777888888888874331 2222 56888899999999999999999999999865 4667888899999
Q ss_pred hhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhh
Q 014698 134 SFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKI 173 (420)
Q Consensus 134 ~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~ 173 (420)
++|..+++.+.+++.+++||.+.|.+.++..++..+.+..
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999988887776554433
No 239
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.46 E-value=2.1e-05 Score=68.51 Aligned_cols=311 Identities=14% Similarity=0.078 Sum_probs=168.7
Q ss_pred hhhhcchhh-----hcchhHH-HHHHHHHHHHHHHHHHHh----------hchHHHHHHHHHHHHhccccchhhhHHHHH
Q 014698 51 ELLRLPLLF-----VTWIRKV-LQTGVLIWSLATALLPLL----------AGFMPGLVLSRVLVGIGEGVSPSAATDLIA 114 (420)
Q Consensus 51 ~l~~~p~~~-----~~~~r~~-~~~~~~~~~~~~~~~~~~----------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~ 114 (420)
-+++.|+.| |.||||. ++-+..+.+......+.. .++...+...-++.-+..+....+.-...-
T Consensus 80 KllWaPiVDs~y~k~~GrrksWvvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwAL 159 (510)
T KOG3574|consen 80 KLLWAPIVDSVYSKRFGRRKSWVVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWAL 159 (510)
T ss_pred HHHHHhhhHHHHHHhhccccceeeehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHH
Confidence 678889988 8887763 333444444433333321 122233333445666666777777788888
Q ss_pred hcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhh-------ccchh---------HHHHHHHHHHHHHHHHhhhcccCc
Q 014698 115 RSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE-------NLGWE---------SVFYIFGLLGIAWFSGFKILQEGE 178 (420)
Q Consensus 115 ~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~-------~~gwr---------~~f~~~~~~~~~~~~~~~~~~~~~ 178 (420)
...++++.|-+......+.+.|..++..+--.+.+ ..+|. .-.++.+...++.-.+..+..+++
T Consensus 160 tmLs~e~lgyaST~q~Vg~~~GyfL~~~ifLaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~ 239 (510)
T KOG3574|consen 160 TMLSRENLGYASTCQSVGQTAGYFLGNVVFLALESPDFCNTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKKEN 239 (510)
T ss_pred HhcCHhhcCchhHHHHHHHhhhHHhhcceeeEecChhhhhHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 88888888877776666666666666544322222 11232 234455555555544444544444
Q ss_pred ccCCCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcch
Q 014698 179 TSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTE 258 (420)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 258 (420)
+.+..+ |.+....+ ...-++++++-|.+..........-.++.+-....+.-+.|+ |.+.++
T Consensus 240 ~~~~~~----e~~~~i~~-------------~yk~l~~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLle~-Gv~ke~ 301 (510)
T KOG3574|consen 240 DESVDE----ELELGIHE-------------SYKLLRDVLKLKSVRWLAGILLTGKLGFQAADALTSLKLLEH-GVPKEE 301 (510)
T ss_pred chhhhh----hhhcCHHH-------------HHHHHHHHHcCccHHHHHHHHHHHHHHhhhhhhccchHHHHc-CCChhH
Confidence 332111 10000000 011245777788888888888888888888888888888885 999988
Q ss_pred hhHHHHhhHHHHHHHHHhhhhhhhhhhhcC-cchHHHHHHH-HHHHHHHhHHHHHHHhh-cC--CCcHHHHHHH-----H
Q 014698 259 AAWVSILPPLASVLVTSIAAQFADNLIATG-VETTMVRKIC-QTIAFLSPAVCMTLSSI-DL--GLPHWEIVGI-----L 328 (420)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~-----~ 328 (420)
.++.... .++.++..+....|+..++ ...+..|... -................ .. +..+.....+ .
T Consensus 302 Lal~~v~----~~plqI~l~~~~gk~ta~~~pl~~~lka~~~R~~~~~~~t~Lv~~~~~~~~~~G~~~~~~~il~i~~y~ 377 (510)
T KOG3574|consen 302 LALIAVP----LVPLQIALPLYIGKWTAGPRPLNVFLKAVPYRLGGGLVQTALVWWTPTLGHSDGTFPRGYYILLITSYA 377 (510)
T ss_pred heeeeee----hhhHHHhhhhhheeecCCCCcchHHHHhhhHHHHHHHHHHHHHhhhcccccCCCceeechHHHHHHHHH
Confidence 7766533 3444444444444543321 1111111111 11111111111111111 11 0111111111 2
Q ss_pred HHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccC
Q 014698 329 TAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDST 383 (420)
Q Consensus 329 ~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 383 (420)
+.+..........+....+..+|...|+.+.+.|+..++|+-.-..+...+.|..
T Consensus 378 ~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~l 432 (510)
T KOG3574|consen 378 FHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGL 432 (510)
T ss_pred HhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccC
Confidence 2222222233334444456678999999999999999999999888998888854
No 240
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.45 E-value=1.1e-06 Score=82.70 Aligned_cols=175 Identities=16% Similarity=0.139 Sum_probs=121.9
Q ss_pred HHHHHHHHHhHHHHHHHhhhh---hhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHH
Q 014698 224 WAMIYAHFCGSWGHYTCLSWL---PTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQT 300 (420)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 300 (420)
|...+..++.+...+++..-. -..+++.++.+..+++++.++.........++.+.+.||+|. +...+
T Consensus 45 WvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~---------R~v~i 115 (509)
T KOG2504|consen 45 WVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGC---------RTVMI 115 (509)
T ss_pred eeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCc---------hHHHH
Confidence 444555555555544443322 233445578888889999999999999999999999999995 34455
Q ss_pred HHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHh
Q 014698 301 IAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLL 380 (420)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 380 (420)
.+.++...++.+..+..+.....+..-++.|++.+....+....+. .+.+++|+.++|+......+|.++-|.+.-.+.
T Consensus 116 ~G~~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~-~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~ 194 (509)
T KOG2504|consen 116 AGGLVAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILG-TYFEKKRALATGIAVSGTGVGTVVFPPLLKYLL 194 (509)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhh-hHhHHHHHHHHhhhhccCCcceeeHHHHHHHHH
Confidence 5555555555555554432222233336778888766666655554 567889999999999999999999999999999
Q ss_pred ccCCceeeeehhhhHHHHHHHHHHhhhcc
Q 014698 381 DSTHSWSMSLFAPSIFFYLTGTIVWLAFA 409 (420)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (420)
+.. +|+..++..+.+.+-........++
T Consensus 195 ~~~-G~r~~~l~~~~~~l~~~~~~~~~rp 222 (509)
T KOG2504|consen 195 SKY-GWRGALLIFGGISLNVLVAGALLRP 222 (509)
T ss_pred HHh-CcHHHHHHHHHHHHHHHHHHHHcCC
Confidence 997 7777888777766555555555544
No 241
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.43 E-value=3.6e-06 Score=76.60 Aligned_cols=178 Identities=10% Similarity=0.031 Sum_probs=124.0
Q ss_pred hhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHH
Q 014698 216 AIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVR 295 (420)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~ 295 (420)
+++.+++...+.+...+...+...+.+++--++++. +..+..-|......-.+.++.-++.+++.+|+|+-
T Consensus 366 ~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled~-~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv-------- 436 (618)
T KOG3762|consen 366 KVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLEDL-GGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHV-------- 436 (618)
T ss_pred HHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhhc-CCcceeeeehhhhhccchHHHHHHHHHHHHHhccc--------
Confidence 455667766666666666777777777777777775 65566667776777778888888999999999964
Q ss_pred HHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhh-hhhHHHHHH
Q 014698 296 KICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVG-AVPGIVGVA 374 (420)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~-~~g~~~~~~ 374 (420)
..+..++..-..-++.+... .+++..+..=++-|+..+.........+....||+.++++.++..... .+|-.+|+.
T Consensus 437 -~v~~lgLa~~~~Rf~~~S~L-~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~Gsl 514 (618)
T KOG3762|consen 437 -NVMYLGLACNVGRFLYYSYL-QNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSL 514 (618)
T ss_pred -ceeeehhhHHHHHHHHHHHh-cCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhh
Confidence 22233333333333333322 234444444488899888888888888888899999999999997554 589999999
Q ss_pred HHHHHhccCCceeeeehhhhHHHHHHHHHHh
Q 014698 375 LTGYLLDSTHSWSMSLFAPSIFFYLTGTIVW 405 (420)
Q Consensus 375 ~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (420)
++|.+.+.. +-...|...++.+++.+++..
T Consensus 515 IGG~~v~~f-g~~ttf~~~giAcl~~l~~~~ 544 (618)
T KOG3762|consen 515 IGGFVVERF-GARTTFRIFGIACLVTLALFI 544 (618)
T ss_pred hhhhhheee-hhHHHHHHHHHHHHHHHHHHH
Confidence 999999987 455567776665555554433
No 242
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.40 E-value=9.8e-06 Score=68.24 Aligned_cols=137 Identities=15% Similarity=0.143 Sum_probs=87.0
Q ss_pred HHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHH
Q 014698 234 SWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLS 313 (420)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (420)
....|.+..|.|..- +.+|+|..|...+.....++..+| ++.|.+.||+|+ +....++......++...
T Consensus 15 ~Gt~Y~Fs~yS~~Lk-~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp---------~~~l~iG~~~~~~GY~~~ 83 (250)
T PF06813_consen 15 SGTTYTFSAYSPQLK-SRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGP---------WVVLLIGAVLGFVGYGLL 83 (250)
T ss_pred cCcccchhhhhHHHH-HHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcch---------HHHHHHHHHHHHHHHHHH
Confidence 334555566666554 568999999999988888888764 788999999994 344444444444444333
Q ss_pred hhc-C----CCcHHHHHHH-HHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhcc
Q 014698 314 SID-L----GLPHWEIVGI-LTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDS 382 (420)
Q Consensus 314 ~~~-~----~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 382 (420)
... . +.+.+..... .+.+.+.............+.+| ++||++.|+.-....+++++-..+...+.+.
T Consensus 84 ~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~ 157 (250)
T PF06813_consen 84 WLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGD 157 (250)
T ss_pred HHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCC
Confidence 221 1 1122222222 23333333233333444456675 6899999999999999999888888877765
No 243
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.38 E-value=7.3e-07 Score=77.13 Aligned_cols=123 Identities=13% Similarity=0.074 Sum_probs=96.1
Q ss_pred HhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHH----HHHHHHHHHHhccccchhhhHHHHHhcCCccccchh
Q 014698 50 LELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMP----GLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRA 125 (420)
Q Consensus 50 ~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~----~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 125 (420)
|.++.+.+.|+.|||+.+..+.+++++..++... ..+-. ++..+|++. ++.+.+.+.|..|.+|.+-|+..
T Consensus 397 GlLIt~~iverlGRKkTMal~l~~f~iflfll~~-c~~rn~~tvllf~arafi----sg~fqvaYvYtPEVyPTavRatg 471 (528)
T KOG0253|consen 397 GLLITGVIVERLGRKKTMALSLILFGIFLFLLTT-CKTRNAYTVLLFTARAFI----SGAFQVAYVYTPEVYPTAVRATG 471 (528)
T ss_pred chhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHH-hcCcchhHHHHHHHHHHH----hchheEEEEecCcccchhhhhcc
Confidence 6888888899999999999999999998887654 33322 344556544 44566778999999999999999
Q ss_pred hHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcc
Q 014698 126 VSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGET 179 (420)
Q Consensus 126 ~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~ 179 (420)
.|..+...-+|.++.|.++ +....+-..+..+.+..+++..+...++|-+++
T Consensus 472 vGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffPiEtk 523 (528)
T KOG0253|consen 472 VGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFPIETK 523 (528)
T ss_pred hhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheeeeeccC
Confidence 9999999999999999998 333334456667777777887788888886654
No 244
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=98.38 E-value=7.5e-06 Score=73.13 Aligned_cols=329 Identities=13% Similarity=0.065 Sum_probs=157.9
Q ss_pred cchhH-HHHHHHHHHHHHHHHHHHhhchHH-----------------HHHHHHHHHHhccccchhhhHHHHHhcCCcccc
Q 014698 61 TWIRK-VLQTGVLIWSLATALLPLLAGFMP-----------------GLVLSRVLVGIGEGVSPSAATDLIARSIPLEER 122 (420)
Q Consensus 61 ~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~-----------------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 122 (420)
+|||| .+..+....+++.++..+ +.++. .++++--+.=++.-.....+.+++.|...++++
T Consensus 98 ~GRRRPfI~~~s~~i~~~l~Lig~-aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~ 176 (498)
T KOG0637|consen 98 YGRRRPFILAGSLLIAVSLFLIGY-AADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAK 176 (498)
T ss_pred cccccchHHHhhHHHHHHHhhhhh-HhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhh
Confidence 34554 555556666666666654 44432 233444444456557777889999999977766
Q ss_pred ch-hhHHHHhhhhhHHHHHHhhHHHhhhccchhHHH--HHHHHHHHHH-------HH-HhhhcccCc--cc---CCCCcC
Q 014698 123 SR-AVSFVFGGLSFGSVAGLLLAPPIIENLGWESVF--YIFGLLGIAW-------FS-GFKILQEGE--TS---NGATLA 186 (420)
Q Consensus 123 ~~-~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f--~~~~~~~~~~-------~~-~~~~~~~~~--~~---~~~~~~ 186 (420)
.+ +++.+.....+|..+|..+++++ +|+-.| ...-...+.+ .. ..+..+++. .+ +++...
T Consensus 177 ~~~Ans~f~~f~avGnvLGY~~g~y~----~~~~~~~Ft~~~~~~~~C~~~~~~~~~~v~L~~i~~~~~l~~~~~~~~s~ 252 (498)
T KOG0637|consen 177 KTRANSVFSFFMAVGNVLGYALGSYL----GLYKIFPFTLTTACDLYCANLKLCFFLEVTLLLIETSESLWYPQEKPLSP 252 (498)
T ss_pred hhccchhHHHHHHhcceeeeeccccc----CceEEeehHHHHHHHHHHHHHHHHHHHhhhhhheecccccccccccCCCC
Confidence 66 99999999999999999988744 443222 1111111110 00 001111110 00 000000
Q ss_pred ccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHh-hhhhCCCcchh------
Q 014698 187 PRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYF-SEELSLNLTEA------ 259 (420)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~------ 259 (420)
+. .....+........|... .+ ....|..+.+.+...+.+.+.+.+..+...++ ++.++-|+...
T Consensus 253 ~~-~~~~~~~~~~~~~~e~fG-----~~--~~mpr~m~~L~i~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~ 324 (498)
T KOG0637|consen 253 KG-TTARSKSSKLPFLLEIFG-----AL--KVMPRPMRMLLIVTLLTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAK 324 (498)
T ss_pred Cc-ccccccccCcchHHHHhc-----hH--hhCChhHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHH
Confidence 00 000000000000001100 00 11146778888888888888888777777666 34455443321
Q ss_pred ----------hHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHH-------hhc---CCC
Q 014698 260 ----------AWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLS-------SID---LGL 319 (420)
Q Consensus 260 ----------~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~---~~~ 319 (420)
.+=..+..+...+.+....++.||+|.|+..........+..++.......... ... ...
T Consensus 325 ~~Y~~GV~~G~~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G~~~~~~~~ 404 (498)
T KOG0637|consen 325 KLYNAGVRMGCLGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGVNAFGLATGLAGLVLNTYVVLSHRSTAGILSSPLLT 404 (498)
T ss_pred HHHHhccccchHHHHHHHHHHHHHHHHHHHHHHhcCcceEEeehhHHHHHHHHHHhhhhhHHHHHHHHhhcceeecchhc
Confidence 122345556666777788899999995432222111111111111100000000 000 000
Q ss_pred cHHHHHH-HHHHHHHhhhhhhhhhhhhhhccC--ccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHH
Q 014698 320 PHWEIVG-ILTAGLALSSFALSGLYCTHQDIS--PEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIF 396 (420)
Q Consensus 320 ~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~--~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~ 396 (420)
.++..+. .-..+.-...-..........+.. ...+|...|+.|....+...+.....|.+.+..|+-+.+-+..+..
T Consensus 405 ~p~~l~~~y~~~g~~~a~t~~~pf~~~s~~~~~sg~g~G~~~gvln~~I~ipQvivs~~~Gp~~~~~G~~~~~~~~~~a~ 484 (498)
T KOG0637|consen 405 VPYGALALYAILGIPLAITFSIPFALASIEIGNSGLGQGLDLGVLNCAIVIPQVLVSLGLGPLDQLFGGGNLPAFVSGAV 484 (498)
T ss_pred ccHHHHHHHHHhCCccccccccccccccccccCccCCCCceeeeeeeeeeehhheeeccccchhhhcCCcchhHHHHHHH
Confidence 0011111 111111111111111111111111 1235778888888888889988888899999887766655555544
Q ss_pred HHHHHH
Q 014698 397 FYLTGT 402 (420)
Q Consensus 397 ~~~~~~ 402 (420)
.+..+.
T Consensus 485 s~~~~~ 490 (498)
T KOG0637|consen 485 ALLIGG 490 (498)
T ss_pred HHHHHH
Confidence 444433
No 245
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.37 E-value=1.2e-05 Score=76.86 Aligned_cols=135 Identities=12% Similarity=0.094 Sum_probs=94.2
Q ss_pred hhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhh
Q 014698 258 EAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSF 337 (420)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 337 (420)
+.+++.+...++..++.++.|+++|++|| |..+..+.+...+..++..... +.....++=++.|++.+..
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~GR---------k~~l~~~~~~~~iG~ii~~~a~-~~~~l~~GR~l~G~g~G~~ 159 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRIGR---------KKTLLLAVVLFLIGAIIIALAP-SWYQLIVGRILTGLGVGGA 159 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhh---------HHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHhccchhhh
Confidence 34789999999999999999999999995 3444444444444444444433 3555666668889999877
Q ss_pred hhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccC-CceeeeehhhhHHHHHHHHH
Q 014698 338 ALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDST-HSWSMSLFAPSIFFYLTGTI 403 (420)
Q Consensus 338 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~-~~~~~~~~~~~~~~~~~~~~ 403 (420)
.........+..|++.||...+..+....+|..++ .+.+...++. .+|+..+.+..+..++..+.
T Consensus 160 ~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~ 225 (513)
T KOG0254|consen 160 SVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALG 225 (513)
T ss_pred hhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHH
Confidence 76666666666778899999999999888877777 5566555542 25775665555544444444
No 246
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.36 E-value=1.1e-05 Score=74.29 Aligned_cols=137 Identities=15% Similarity=0.032 Sum_probs=85.7
Q ss_pred hHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhh
Q 014698 260 AWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFAL 339 (420)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 339 (420)
+...+...+++++|+++.+.++||+||| ............+..+.......+.....++.=++.|+..+....
T Consensus 63 S~~vs~f~iG~~~Gs~~~~~la~~~GRK-------~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~ 135 (485)
T KOG0569|consen 63 SLIVSIFFIGGMIGSFSSGLLADRFGRK-------NALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTG 135 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcch-------HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHH
Confidence 4456778899999999999999999975 222222222222222222233334455566666888888886666
Q ss_pred hhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHH-HHHhccCCceeeeehhhhHHHHHHHHH
Q 014698 340 SGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALT-GYLLDSTHSWSMSLFAPSIFFYLTGTI 403 (420)
Q Consensus 340 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~-g~l~~~~~~~~~~~~~~~~~~~~~~~~ 403 (420)
.......|..|++.||....+......+|..++..++ ..+.+....|...+....+..++..+.
T Consensus 136 ~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~ 200 (485)
T KOG0569|consen 136 LVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLAL 200 (485)
T ss_pred HHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHH
Confidence 6666677778889999999999988888888885544 333333223444444433433333333
No 247
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.35 E-value=4e-06 Score=80.42 Aligned_cols=140 Identities=16% Similarity=0.063 Sum_probs=106.2
Q ss_pred hhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHH
Q 014698 250 EELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILT 329 (420)
Q Consensus 250 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (420)
+....+.....+..++..++..+|.++.|.++||+|| |.....+.+...++-......++ .....+.=++
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GR---------k~~~~~~~~~~~i~~~~~a~a~~-~~~~~~~Rfl 180 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGR---------KPVLLVSLLLFIIFGILTAFAPN-YWMFLIFRFL 180 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhccc---------HHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHH
Confidence 3446677778888899999999999999999999994 45555666665555554444432 4444444588
Q ss_pred HHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHH
Q 014698 330 AGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTI 403 (420)
Q Consensus 330 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 403 (420)
.|++.++..........|.++|++|+.+..+ ......++.+++...+++.. +|+..+++..+...+..++
T Consensus 181 ~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~---~Wr~~~~~~~~~~~~~~~~ 250 (521)
T KOG0255|consen 181 SGFFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR---DWRWLFWIISIPSGLFLLL 250 (521)
T ss_pred HHhhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh---hHHHHHHHHHHHHHHHHHH
Confidence 8998888888888888888999999999999 88888999999999999887 6777777766555444443
No 248
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.34 E-value=6.2e-06 Score=75.47 Aligned_cols=185 Identities=10% Similarity=0.075 Sum_probs=115.8
Q ss_pred HHHHHHHHHHHHhHHHHHHHhhhhhhHhhh-hhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHH
Q 014698 221 KAVWAMIYAHFCGSWGHYTCLSWLPTYFSE-ELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQ 299 (420)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~ 299 (420)
|..+...+..++....+..+..-.-.|+++ +.+-+....|++.+...++..++++..|+...|.+.- |+.++
T Consensus 34 rsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~-------k~Pli 106 (488)
T KOG2325|consen 34 RSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSV-------KKPLI 106 (488)
T ss_pred HhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCc-------ccCHH
Confidence 445555666666555555555555567765 2477778889999999999999999999999998753 33444
Q ss_pred HHHHHHhHHHHHH--HhhcCC-CcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHH
Q 014698 300 TIAFLSPAVCMTL--SSIDLG-LPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALT 376 (420)
Q Consensus 300 ~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~ 376 (420)
....+.....++. ....++ ..++..++=++.|++.+..... -..+.+...+++|.++.+..+....+|..+||.+.
T Consensus 107 ~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~a~l-R~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q 185 (488)
T KOG2325|consen 107 VSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNFAVL-RAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQ 185 (488)
T ss_pred HHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccHHHH-HHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHH
Confidence 3333333322222 222222 2333344446777776643333 33344445567888888888887788888888766
Q ss_pred HHHhcc------------CCceeeeehhhhHHHHHHHHHHhhhccCCCC
Q 014698 377 GYLLDS------------THSWSMSLFAPSIFFYLTGTIVWLAFASSKP 413 (420)
Q Consensus 377 g~l~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (420)
..+... .+.|+.+-++.++..++..++.+..++|..+
T Consensus 186 ~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~ 234 (488)
T KOG2325|consen 186 LAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYR 234 (488)
T ss_pred HHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeeccc
Confidence 544321 1235666677777777777777777776443
No 249
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.28 E-value=0.00026 Score=59.77 Aligned_cols=128 Identities=14% Similarity=0.023 Sum_probs=90.9
Q ss_pred hhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHh------hchHHHHHHHHHHHHhccccchhhhHHHHHhcCCccccch
Q 014698 51 ELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLL------AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSR 124 (420)
Q Consensus 51 ~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~ 124 (420)
++..|.+.|+.++|.++.+|.+...++....... ..++|.+.+..++.|.+.+.....+.....+.+| ++||+
T Consensus 53 G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~ 131 (250)
T PF06813_consen 53 GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGT 131 (250)
T ss_pred cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCc
Confidence 4566667899999999999999999888776532 1457788888888888877777777777778887 68999
Q ss_pred hhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcc
Q 014698 125 AVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGET 179 (420)
Q Consensus 125 ~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~ 179 (420)
+.|+.-....++..+-..+...+.+.-.-+..+.....+.++.++...++++.++
T Consensus 132 vvgilk~~~GLSaai~t~i~~~~f~~~~~~fll~la~~~~~v~l~~~~~vr~~~~ 186 (250)
T PF06813_consen 132 VVGILKGFFGLSAAIFTQIYSAFFGDDPSSFLLFLAVLPAVVCLVAMFFVRPVPP 186 (250)
T ss_pred eehhhhHHHHhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhheeccCC
Confidence 9999999999998887776666655422333333333334444455555554443
No 250
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.28 E-value=3.1e-05 Score=67.40 Aligned_cols=150 Identities=20% Similarity=0.200 Sum_probs=108.6
Q ss_pred HhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCC
Q 014698 240 CLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGL 319 (420)
Q Consensus 240 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (420)
....++..- +.+|.|...+|++.++.-++....+++..++.+|+|.+ |. +..+++...+...+-... .
T Consensus 31 vgPLL~~Ir-~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~e-------r~--l~~~Llli~~G~~iR~~~--~ 98 (395)
T COG2807 31 VGPLLDEIR-QDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEE-------RS--LFLALLLIAAGILIRSLG--G 98 (395)
T ss_pred hhhhHHHHH-HHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhH-------HH--HHHHHHHHHHHHHHHhcc--c
Confidence 333444443 45799999999999999999999999999999999964 33 334444444444433322 3
Q ss_pred cHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHH
Q 014698 320 PHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYL 399 (420)
Q Consensus 320 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~ 399 (420)
....+....+.|.+.+..+......+.+++ |++.+..+|++.+...+++++++.+.-.+.++.++|+.....-+...++
T Consensus 99 ~~~L~~gt~l~G~gIav~nVLLPslIK~~F-pk~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~all 177 (395)
T COG2807 99 LPLLFLGTLLAGAGIAVINVLLPSLIKRDF-PKRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALL 177 (395)
T ss_pred HHHHHHHHHHHHhhHHHHHHhhhHHHHhhc-ccchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHH
Confidence 455666667778888766655556665555 5678999999999999999999999999998877788777776665554
Q ss_pred HHH
Q 014698 400 TGT 402 (420)
Q Consensus 400 ~~~ 402 (420)
+.+
T Consensus 178 Al~ 180 (395)
T COG2807 178 ALL 180 (395)
T ss_pred HHH
Confidence 443
No 251
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=98.25 E-value=0.00016 Score=60.10 Aligned_cols=99 Identities=17% Similarity=0.184 Sum_probs=57.5
Q ss_pred cccchhhHHHHhhhhhHHHHHHhhHHHh---hh--ccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhh
Q 014698 120 EERSRAVSFVFGGLSFGSVAGLLLAPPI---IE--NLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINM 194 (420)
Q Consensus 120 ~~r~~~~~~~~~~~~~g~~~g~~l~~~l---~~--~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (420)
|+|+........+.++|.++.-..--.- .+ .-.|++.+.+.+++.++-++++..+-++-+...++ +++++
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~fd~~~~~-~k~~k---- 76 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGKNFDIYSPK-EKQEK---- 76 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCcc-ccccc----
Confidence 6778888888888899987764432111 11 22599999998888777666655553321111111 00000
Q ss_pred hhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHH
Q 014698 195 KKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFC 232 (420)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (420)
+..+..++.+..+.+|++..|...+.+..
T Consensus 77 ---------~~~~~~~~~s~~~~LK~K~tw~w~~~Yg~ 105 (267)
T PF07672_consen 77 ---------ENSTLSKKPSYKSILKEKETWKWILIYGI 105 (267)
T ss_pred ---------ccccccccchHHHHHccchHHHHHHHHHH
Confidence 00111223456789999999887766654
No 252
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.19 E-value=1.3e-05 Score=53.93 Aligned_cols=61 Identities=20% Similarity=0.224 Sum_probs=54.1
Q ss_pred HHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhc
Q 014698 226 MIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIAT 287 (420)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~ 287 (420)
+-..+++...+......++|.|+++ .|+|+.+.|.+.++..+...++.++.|.++||.+++
T Consensus 5 lk~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~ 65 (77)
T PF12832_consen 5 LKAFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKR 65 (77)
T ss_pred HHHHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCcc
Confidence 3456667777788888899999997 599999999999999999999999999999999975
No 253
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.18 E-value=4.9e-05 Score=73.74 Aligned_cols=162 Identities=14% Similarity=0.091 Sum_probs=106.2
Q ss_pred HHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhh
Q 014698 236 GHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSI 315 (420)
Q Consensus 236 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (420)
++|+....+..|+.+.+|++...+..+........-+..+++|+++|++-.+ ++.+.. +.++..++..+...
T Consensus 2 syYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~-------~~tIl~-~~ii~~lG~~llai 73 (654)
T TIGR00926 2 SYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGK-------FKTILY-LSIVYVVGHALLSF 73 (654)
T ss_pred ceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-------HHHHHH-HHHHHHHHHHHHHh
Confidence 4566677778888888899988888777777777778888899999987543 333333 33333333333222
Q ss_pred cCC-------CcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCcc---chHHHHHHHHHhhhhhHHHHHHHHHHHhccCC-
Q 014698 316 DLG-------LPHWEIVGILTAGLALSSFALSGLYCTHQDISPE---YASILLGITNTVGAVPGIVGVALTGYLLDSTH- 384 (420)
Q Consensus 316 ~~~-------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~- 384 (420)
... .....++++.+...+.+.+-+.......+.++++ .+-+...+.....++|+.+++.+.+++.+..+
T Consensus 74 ~a~~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~ 153 (654)
T TIGR00926 74 GAIPSSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGC 153 (654)
T ss_pred ccCcccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 211 0122445566667777766666666666666543 47778888899999999999999999875432
Q ss_pred -----ceeeeehhhhHHHHHHHHHHh
Q 014698 385 -----SWSMSLFAPSIFFYLTGTIVW 405 (420)
Q Consensus 385 -----~~~~~~~~~~~~~~~~~~~~~ 405 (420)
+|..+|.+.++.++++.++..
T Consensus 154 fg~~~~~~~aF~i~~i~m~ia~lvf~ 179 (654)
T TIGR00926 154 FGCQDCYPLAFGVPAILMILALIVFM 179 (654)
T ss_pred cccCcchHHHHHHHHHHHHHHHHHHH
Confidence 466667666665555544443
No 254
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.16 E-value=2.4e-05 Score=69.33 Aligned_cols=122 Identities=34% Similarity=0.420 Sum_probs=94.7
Q ss_pred hhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhc--hHHHHHHHHHHHHhccccchhhhHHHHHhcCCc-c
Q 014698 44 LKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAG--FMPGLVLSRVLVGIGEGVSPSAATDLIARSIPL-E 120 (420)
Q Consensus 44 ~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~-~ 120 (420)
......+....+.+.|+.+||+.+..+.....++.+...+ .. +.+.+++.|+.+|++.+...+...+++.|+.|+ +
T Consensus 49 ~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 127 (338)
T COG0477 49 FLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLAL-APNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEAT 127 (338)
T ss_pred HHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHh-CccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchh
Confidence 3333344567777788888888888888765555555554 44 488999999999999999999999999999997 6
Q ss_pred ccchhhHHHHh-hhhhHHHHHHhhHHHhhhc--cchhHHHHHHHHHHHH
Q 014698 121 ERSRAVSFVFG-GLSFGSVAGLLLAPPIIEN--LGWESVFYIFGLLGIA 166 (420)
Q Consensus 121 ~r~~~~~~~~~-~~~~g~~~g~~l~~~l~~~--~gwr~~f~~~~~~~~~ 166 (420)
+|+...+.... ...+|..++|.+++.+... .+||..|.........
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (338)
T COG0477 128 ERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLGLL 176 (338)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 78999998888 5888999999887766654 5799977766665544
No 255
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.15 E-value=9.5e-05 Score=68.75 Aligned_cols=161 Identities=18% Similarity=0.179 Sum_probs=104.4
Q ss_pred hhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCC---Cc
Q 014698 244 LPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLG---LP 320 (420)
Q Consensus 244 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 320 (420)
...|+++.+|.++.+...+.....+.-. ..++.|.++|-+.-.+.+ ||..+.++.++..+........+. +.
T Consensus 12 ~~~~l~~~l~ls~~~~~~~~~~~~lPw~-~Kp~~g~lsD~~pi~G~r----r~~Y~~i~~~~~~~~~~~~~~~~~~~~s~ 86 (433)
T PF03092_consen 12 IYPFLKDDLGLSPAQLQRLSSLASLPWS-IKPLYGLLSDSFPIFGYR----RKPYMIIGWLLGAVSALVLALLPASESSA 86 (433)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHhCchH-HhhhHHhhcccccccCCc----chHHHHHHHHHHHHHHHHHHhcccccchh
Confidence 3456778889999998887777666554 456789999998532222 666666666555443333332222 22
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhcc--CccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHH
Q 014698 321 HWEIVGILTAGLALSSFALSGLYCTHQDI--SPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFY 398 (420)
Q Consensus 321 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~ 398 (420)
....+.+++..++........-..+.|.. .|+.+|...+.......+|+.++..+.|.+.+.. +++..|.+.+.+..
T Consensus 87 ~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~-~~~~~f~i~~~~~~ 165 (433)
T PF03092_consen 87 AIAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSF-GPQGVFLISAALPL 165 (433)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcC-CCeEEehHHHHHHH
Confidence 33333344445555544444444444443 2344889999999999999999999999999986 78888888776666
Q ss_pred HHHHHHhhhccC
Q 014698 399 LTGTIVWLAFAS 410 (420)
Q Consensus 399 ~~~~~~~~~~~~ 410 (420)
+..+..+...+|
T Consensus 166 l~~~~~~~~~~e 177 (433)
T PF03092_consen 166 LMLIVALFLLEE 177 (433)
T ss_pred HHHHHHHHhhhh
Confidence 665555555554
No 256
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.12 E-value=4.5e-06 Score=76.02 Aligned_cols=121 Identities=17% Similarity=0.113 Sum_probs=105.9
Q ss_pred hhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCccccchhhHHHH
Q 014698 51 ELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVF 130 (420)
Q Consensus 51 ~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~ 130 (420)
-.+...+..+.|+-+++..++.+..+=.+..+. .+|.|+.+-..+++|+..+..+.+..+|+++..||+-|+.+.++.+
T Consensus 423 ~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~-L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~ 501 (618)
T KOG3762|consen 423 YFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSY-LQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQ 501 (618)
T ss_pred HHHHHHHHHHhcccceeeehhhHHHHHHHHHHH-hcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHH
Confidence 444456678888889999999999988888876 8999999999999999999999999999999999999999999876
Q ss_pred -hhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhh
Q 014698 131 -GGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFK 172 (420)
Q Consensus 131 -~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~ 172 (420)
....+|--+|.++||.+.+.+|=|..|...++.+++.++...
T Consensus 502 g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~ 544 (618)
T KOG3762|consen 502 GIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFI 544 (618)
T ss_pred HHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHH
Confidence 556789999999999999999999999999988887554443
No 257
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.11 E-value=3e-05 Score=68.73 Aligned_cols=119 Identities=10% Similarity=0.006 Sum_probs=89.5
Q ss_pred hhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCcc
Q 014698 41 RIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLE 120 (420)
Q Consensus 41 ~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~ 120 (420)
..+.....++.++..++.||.++||++..+..+..++.++... .++.. ....-++.|++.+..+|...+...+..|+
T Consensus 185 s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~-~~~~~-~~~~~~l~g~~~s~i~P~~~s~a~~~~~~- 261 (310)
T TIGR01272 185 AYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAAL-THGYV-AMWFVLALGLFNSIMFPTIFSLALNALGR- 261 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH-cCCHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhh-
Confidence 3444455567888889999999999888888777777655543 44332 23455588999999999999999998874
Q ss_pred ccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHH
Q 014698 121 ERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLL 163 (420)
Q Consensus 121 ~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~ 163 (420)
+.+++.++. ....+|..+.|++.|.+.|..|.+..|++..+.
T Consensus 262 ~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~~ 303 (310)
T TIGR01272 262 HTSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPVPC 303 (310)
T ss_pred hhhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHHHH
Confidence 345666765 566789999999999999988988888754433
No 258
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.10 E-value=0.0033 Score=58.79 Aligned_cols=168 Identities=10% Similarity=0.048 Sum_probs=99.9
Q ss_pred hHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhh---------ccchhHHHHH----HHHHHHHHHHHhhhcc
Q 014698 109 ATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE---------NLGWESVFYI----FGLLGIAWFSGFKILQ 175 (420)
Q Consensus 109 ~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~---------~~gwr~~f~~----~~~~~~~~~~~~~~~~ 175 (420)
-..+.+|.++.+|-.|..++...+.++|.++++.+..++.+ ...|...... ..+.+++......++.
T Consensus 165 FW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~v~~~g~~i~~~~~~~~ 244 (491)
T PF03219_consen 165 FWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGVDAWELSLNSLMGIVLILGIVIILLYRYMN 244 (491)
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46788999999999999999999999999999999888877 1246544322 2222222333333333
Q ss_pred cCcccCCCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCC
Q 014698 176 EGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLN 255 (420)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 255 (420)
+....++... +... ++.++..+..-..+++.++|+|.+..+.+...+++.....+....-..+++.+.-+
T Consensus 245 ~~vl~~~~~~-~~~~---------~~kk~k~k~s~~es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~~~ 314 (491)
T PF03219_consen 245 KNVLTDPRFY-PSAK---------KKKKKKPKMSLKESFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYPDP 314 (491)
T ss_pred HHccCccccc-hhhh---------cccccCCCccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCc
Confidence 2221111110 0000 00000011111234567888999998888888887777777665555565554433
Q ss_pred cchh---hHHHHhhHHHHHHHHHhhhhhhhhhhh
Q 014698 256 LTEA---AWVSILPPLASVLVTSIAAQFADNLIA 286 (420)
Q Consensus 256 ~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~~~ 286 (420)
.+.. |......++..++..++++.+.+|+|-
T Consensus 315 ~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW 348 (491)
T PF03219_consen 315 NDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGW 348 (491)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 2222 344555666666777778888888874
No 259
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.08 E-value=3.8e-05 Score=59.62 Aligned_cols=99 Identities=14% Similarity=0.060 Sum_probs=86.3
Q ss_pred HhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCccccchhh
Q 014698 47 TNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAV 126 (420)
Q Consensus 47 ~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~ 126 (420)
..+.+++.+++..+.+.|+.++++.+.+.+-.... +-++.+.++.+..+.|++.+..++....++.+..++++|++..
T Consensus 50 ~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~--~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~~ 127 (156)
T PF05978_consen 50 FAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF--FYPNSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGRNT 127 (156)
T ss_pred HHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH--HhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhHH
Confidence 44568888888999999999999999998766543 3677789999999999999999999999999999999999999
Q ss_pred HHHHhhhhhHHHHHHhhHHHh
Q 014698 127 SFVFGGLSFGSVAGLLLAPPI 147 (420)
Q Consensus 127 ~~~~~~~~~g~~~g~~l~~~l 147 (420)
++.......+.++|.++...+
T Consensus 128 ~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 128 GIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999999999988888776554
No 260
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=98.05 E-value=0.0001 Score=62.35 Aligned_cols=310 Identities=14% Similarity=0.085 Sum_probs=147.3
Q ss_pred hhhhcchhhhcc-hhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCccccchhhHHH
Q 014698 51 ELLRLPLLFVTW-IRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFV 129 (420)
Q Consensus 51 ~l~~~p~~~~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~ 129 (420)
-+..+...||+. .+|+. +...+.+.+..+.++ +++.++-+.+-.+..++.|.....-.++- ..+|+. ..+-+
T Consensus 79 Kl~~Pff~~rfpf~~Ri~-~~v~~sa~s~~lVaf-s~s~~~sL~GV~~aSissGlGEiTFL~ls-s~Y~~~----~i~~W 151 (409)
T KOG3880|consen 79 KLTAPFFIHRFPFGFRIA-LVVLLSALSFFLVAF-SNSVPMSLLGVVFASISSGLGEITFLALS-SRYPSI----VIAGW 151 (409)
T ss_pred HHhchhhhhhcccchHHH-HHHHHHhcceEEEEe-ccchhHHHhhhhhhhhcCCcceeehhhhh-ccCCCc----eeccc
Confidence 334444466665 33433 344555566666665 89999888888888888776665543333 333322 33444
Q ss_pred HhhhhhHHHHHHhhHHHhhh--ccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCccchhhhhhhhhhhhhhhhc-
Q 014698 130 FGGLSFGSVAGLLLAPPIIE--NLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMG- 206 (420)
Q Consensus 130 ~~~~~~g~~~g~~l~~~l~~--~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 206 (420)
+.+.+.+.++|..--..+.+ .++-|....+...+.++....++++.++|+.......+.+.+...+...+.+..|.+
T Consensus 152 SSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~pes~~~ptl~~~~~~~~~~~~~~~a~e~~s 231 (409)
T KOG3880|consen 152 SSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSPESVYSPTLQPSTEIIPSQYLPFEAAEEKS 231 (409)
T ss_pred cCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCCccccCCCcCccceeccCCCCccccccccc
Confidence 55555555666554445555 235677777777666665555555544443322111111111000000000000111
Q ss_pred ccccccchhhhh-hcHHHHHHHHHHHHhHHHHHHHhh-hhhhHhhh-hhCCCcc---hhhHHHHhhHHHHHHHHHhhhhh
Q 014698 207 ESLKDVPWKAIF-RSKAVWAMIYAHFCGSWGHYTCLS-WLPTYFSE-ELSLNLT---EAAWVSILPPLASVLVTSIAAQF 280 (420)
Q Consensus 207 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~g~~~~---~~~~~~~~~~~~~~~~~~~~g~l 280 (420)
...+....++-+ +-++.....+-....++..|.++. ..++.+-+ ..|++.. |.-+....+.++..+++-
T Consensus 232 v~s~~~~~~e~~~~i~pll~~MvPL~~VY~~EY~INQGl~ell~F~c~~g~sls~~sqYRwyqvlYQlGVFiSRS----- 306 (409)
T KOG3880|consen 232 VPSRRLGLKETLKRIKPLLKYMVPLALVYFAEYFINQGLAELLLFPCSHGFSLSKDSQYRWYQVLYQLGVFISRS----- 306 (409)
T ss_pred CchhhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhEEeccccCCccchhhcchhhheeeeeeEEEEec-----
Confidence 011111122222 123333344455555556655554 33333221 1233322 234555555544332221
Q ss_pred hhhhhhcCcchHHHHHHHHHHHHHHhHHHH--HHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHH
Q 014698 281 ADNLIATGVETTMVRKICQTIAFLSPAVCM--TLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILL 358 (420)
Q Consensus 281 ~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~ 358 (420)
+-|+-+- +. -+.+.+.-++-....+ ..+.+. ++.+...+..+.-|+..|.........+.++.+|++|--++
T Consensus 307 S~~~~~~----p~-l~~LailQ~vNl~ff~~~a~~~ft-psi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfam 380 (409)
T KOG3880|consen 307 SINLFTM----PY-LWLLAILQFVNLLFFLLQAWYWFT-PSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAM 380 (409)
T ss_pred cceEEec----hH-HHHHHHHHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhH
Confidence 1111110 00 1111111111111111 112222 22333333445567777777777777788889999999999
Q ss_pred HHHHHhhhhhHHHHHHHHHH
Q 014698 359 GITNTVGAVPGIVGVALTGY 378 (420)
Q Consensus 359 g~~~~~~~~g~~~~~~~~g~ 378 (420)
+.....-.+|..++..+.=.
T Consensus 381 savs~sDS~Gi~lA~~lalp 400 (409)
T KOG3880|consen 381 SAVSISDSIGIFLAGLLALP 400 (409)
T ss_pred hhheecchhhHHHHHHHhcc
Confidence 99888877877777665533
No 261
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.00 E-value=0.00011 Score=65.46 Aligned_cols=131 Identities=19% Similarity=0.032 Sum_probs=87.5
Q ss_pred hhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhh-hcCcchHHHHHHHHHHHHHHhHHHHH-----HHhhcC----
Q 014698 248 FSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLI-ATGVETTMVRKICQTIAFLSPAVCMT-----LSSIDL---- 317 (420)
Q Consensus 248 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~---- 317 (420)
+..+++.+..-.+.+.+...+.. +.++..|..+|+.+ ..+.+ |...+..+......... ......
T Consensus 6 MIvEL~vpA~lv~~lval~~~~a-p~R~~~G~~SD~~~s~~G~r----RtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~ 80 (403)
T PF03209_consen 6 MIVELGVPAWLVALLVALHYLVA-PLRVWFGHRSDTHPSILGWR----RTPYIWGGTLLQAGGLAIAPFALLLLAESGQQ 80 (403)
T ss_pred HHHHhccHHHHHHHHHHHHHHHH-HHHHHhccccccCcccCcCC----chhhhHHHHHHHHHHHHHHHHHHHHHcccccc
Confidence 33456888887887777766655 46889999999987 11111 22322222222222111 111111
Q ss_pred -C-CcH----HHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccC
Q 014698 318 -G-LPH----WEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDST 383 (420)
Q Consensus 318 -~-~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 383 (420)
+ ..+ .....+.++|.+.+....+......+..|+|+|+++.++...+.-+|.+++..+.|.+.|.+
T Consensus 81 ~~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~ 152 (403)
T PF03209_consen 81 SSGPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPF 152 (403)
T ss_pred cccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 0 111 22334567788888888888888889999999999999999999999999999999999875
No 262
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=97.97 E-value=0.0035 Score=57.43 Aligned_cols=278 Identities=11% Similarity=0.039 Sum_probs=134.9
Q ss_pred hccccchhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhh-----cc--------c---hhHHHHHHHHH
Q 014698 100 IGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIE-----NL--------G---WESVFYIFGLL 163 (420)
Q Consensus 100 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~-----~~--------g---wr~~f~~~~~~ 163 (420)
+-.+....+.-...-....+++++.+..-...+.+.|..++..+--.+.+ .+ | -..-..+.|..
T Consensus 130 fl~ATQDIAVDGWALT~Ls~~n~~~ASTcqtvG~~~Gyfls~tvFlalns~~f~Nky~r~~p~~~glvtl~~yl~fwg~~ 209 (544)
T PF13000_consen 130 FLCATQDIAVDGWALTMLSPENVGYASTCQTVGQTAGYFLSFTVFLALNSPDFCNKYLRSTPSDEGLVTLSGYLKFWGWV 209 (544)
T ss_pred HHHccCCceeehhhhhhcChhhcchHHHHHHhHhhhhHHHHHHHHHhhCCHHHHHHhcccCCCCCCeeeHHHHHHHHHHH
Confidence 33455555666666677777888777776666666666665544333322 00 1 11223344555
Q ss_pred HHHHHHHhhhcccCcccCCC-CcCcc---chhhhhh----hhhhh--hhhhh-cccccccchhhhhhcHHHHHHHHHHHH
Q 014698 164 GIAWFSGFKILQEGETSNGA-TLAPR---SNYINMK----KSLSA--SLEEM-GESLKDVPWKAIFRSKAVWAMIYAHFC 232 (420)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~----~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (420)
.++.-+...+++++++..+. .+.+. ++...++ .+..+ ..+|. .-+..-....+++|.|++..+.+....
T Consensus 210 ~l~~T~~v~~~k~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Y~~l~~ilkLp~V~~li~ilL~ 289 (544)
T PF13000_consen 210 FLIVTILVAFFKKEKPHSESLPKIEPINKSDGKSKEISIEYDESDVISTEEILSIKDVYKSLWKILKLPNVQTLIIILLT 289 (544)
T ss_pred HHHHHHHHheEeecccccccCccccccccccccccccceecccccccchhhhhhHHHHHHHHHHHHcCchHHHHHHHHHH
Confidence 55544444555544432211 11010 0000000 00000 00000 000111123456778888888888888
Q ss_pred hHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcch-------H-------------
Q 014698 233 GSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVET-------T------------- 292 (420)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~-------~------------- 292 (420)
.-.++..-......-+.|. |++.++.+.+..+ .++..++.|+.+.|+.+.+... +
T Consensus 290 ~KigF~a~da~T~LKLlEk-G~~KE~LAl~~li----~~P~qii~~~~~~Kws~g~~P~~~~~~~l~~~~~~~~~~~~l~ 364 (544)
T PF13000_consen 290 AKIGFQANDAVTSLKLLEK-GLSKEDLALLVLI----DFPFQIILPYYIGKWSAGSPPLDVDNKALPNFSRANKIIRLLV 364 (544)
T ss_pred HHhccccchhhhHHHHHHc-CCCHHHhHHHHHH----hhhHHHHHHHHhhhhhcCCCccccccccccccccccchhhhhh
Confidence 8888777777777777774 9999987766543 4455555566666654332100 0
Q ss_pred ----HHHHHHHHHH--HHHhHHHHHH-Hhhc-CCCcHHHHHHHHH----HHHHhhhhhhhhh-hhhhhccCccchHHHHH
Q 014698 293 ----MVRKICQTIA--FLSPAVCMTL-SSID-LGLPHWEIVGILT----AGLALSSFALSGL-YCTHQDISPEYASILLG 359 (420)
Q Consensus 293 ----~~~~~~~~~~--~~~~~~~~~~-~~~~-~~~~~~~~~~~~~----~g~~~~~~~~~~~-~~~~~~~~~~~~g~~~g 359 (420)
..+.+..... +......... ..++ .+........+++ ++-+....+.... +.-.+..+|..-|+.+.
T Consensus 365 g~~g~L~~Wl~af~gRL~~a~l~~~iV~~fP~~g~v~~~Yf~lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMT 444 (544)
T PF13000_consen 365 GDAGALRPWLWAFWGRLVAALLAQLIVYFFPSDGPVPTYYFLLVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMT 444 (544)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHheEEeCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHH
Confidence 0111111111 1111111111 1111 1111111111211 2222222222222 22334468899999999
Q ss_pred HHHHhhhhhHHHHHHHHHHHhcc
Q 014698 360 ITNTVGAVPGIVGVALTGYLLDS 382 (420)
Q Consensus 360 ~~~~~~~~g~~~~~~~~g~l~~~ 382 (420)
+.|+..++|+..-..+.=++.|.
T Consensus 445 LLNTvSNLGGtWP~~~vL~lVD~ 467 (544)
T PF13000_consen 445 LLNTVSNLGGTWPRTFVLWLVDY 467 (544)
T ss_pred HHHHHHhcCCCchHHHHHHHhhh
Confidence 99999999998887777777663
No 263
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.96 E-value=0.00021 Score=66.26 Aligned_cols=136 Identities=14% Similarity=0.154 Sum_probs=89.2
Q ss_pred hHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhh
Q 014698 266 PPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCT 345 (420)
Q Consensus 266 ~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 345 (420)
.++..++.++..|.++||+||| ..+........+........ .++..+ ..-...+............
T Consensus 71 ~~~~~~i~s~~iG~lSD~~grk---------~~L~~~~~~~~l~~~~~~~~---~~~~~~-~~~l~g~~~~~~s~~~a~v 137 (463)
T KOG2816|consen 71 AGLLTLISSPLIGALSDRYGRK---------VVLLLPLFGTILPALCLLFQ---GYWFFL-LLGLSGGFSAIFSVGFAYV 137 (463)
T ss_pred hHHHHHHHHhhhHHhhhhhhhh---------hhHHHHHHHHHHhHHHHHHH---HHHHhh-hcccccchhhhhhhhhhhe
Confidence 3677888899999999999965 22222222222211111111 122222 2212222233444455555
Q ss_pred hhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHhhhccCCCCCC
Q 014698 346 HQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVWLAFASSKPQN 415 (420)
Q Consensus 346 ~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (420)
.+....++|....|+.+.....+..++|.+.+.+.+.. ++...+.+..+...+.........+++..++
T Consensus 138 adis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~-~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~ 206 (463)
T KOG2816|consen 138 ADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFL-GIALVFLIAAASGILSLLYMLLFLPESLQEK 206 (463)
T ss_pred eeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHhhccccccCcc
Confidence 66677889999999999999999999999999999985 7877888888777777777777777655443
No 264
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.85 E-value=0.00046 Score=62.04 Aligned_cols=129 Identities=16% Similarity=0.047 Sum_probs=79.3
Q ss_pred hhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhh--cC---CC
Q 014698 245 PTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSI--DL---GL 319 (420)
Q Consensus 245 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~ 319 (420)
..+.++.|| +...+-+...++.+..++..+.+.|+.||+|-| .....+.....+...+-.. .+ +.
T Consensus 68 ~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR---------~a~llgt~ln~iGa~Ir~iss~p~v~~~ 137 (480)
T KOG2563|consen 68 NNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLR---------TALLLGTVLNGIGAWIRLISSLPFVPPL 137 (480)
T ss_pred HHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchH---------HHHHHHHHHHHHHHHHhhhccCcccccc
Confidence 345566677 666677888888899999999999999999943 3333333333333222211 11 21
Q ss_pred cH--HHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccC
Q 014698 320 PH--WEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDST 383 (420)
Q Consensus 320 ~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 383 (420)
.+ ....+-.+.+...-.......-....-+++++|+++..+..+...+|.+++..+...+..+.
T Consensus 138 f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~ 203 (480)
T KOG2563|consen 138 FRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSS 203 (480)
T ss_pred chhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCC
Confidence 22 22222233333332222222222333489999999999999999999999998888887664
No 265
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=97.69 E-value=0.0074 Score=56.00 Aligned_cols=57 Identities=12% Similarity=0.096 Sum_probs=43.5
Q ss_pred CcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHH
Q 014698 319 LPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVAL 375 (420)
Q Consensus 319 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~ 375 (420)
+..+..+..+++|+..|-.....+....+.+++++|..+-.+......+|-.+|..+
T Consensus 371 ~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 371 GDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred ccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555667888888887777777777777888889888888888888887777765
No 266
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=97.65 E-value=3.1e-05 Score=69.41 Aligned_cols=129 Identities=12% Similarity=0.048 Sum_probs=101.2
Q ss_pred HhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhch-H-------HHHHHHHHHHHhccccchhhhHHHHHhcCCccc
Q 014698 50 LELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGF-M-------PGLVLSRVLVGIGEGVSPSAATDLIARSIPLEE 121 (420)
Q Consensus 50 ~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~-------~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~ 121 (420)
|..+...+.|+.|||++.+.+.+++++..+..+. ..| . ..+.+..++.-+| .......+-+|.+|.+-
T Consensus 364 Gyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~-~y~~~~~~~Gf~v~y~l~~ff~NFG---Pn~ttfivpaE~FParv 439 (538)
T KOG0252|consen 364 GYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAG-PYNQLENTIGFVVLYSLTFFFGNFG---PNATTFIVPAEIFPARV 439 (538)
T ss_pred ceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcC-CcccccccCceeehHHHHHHHHhcC---CCceeEEeehhhchHHH
Confidence 4455555699999999999999999999888775 544 1 1222333333333 33344667899999999
Q ss_pred cchhhHHHHhhhhhHHHHHHhhHHHhhh-----ccchhHHHHHHHHHHHHHHHHhhhcccCcccCC
Q 014698 122 RSRAVSFVFGGLSFGSVAGLLLAPPIIE-----NLGWESVFYIFGLLGIAWFSGFKILQEGETSNG 182 (420)
Q Consensus 122 r~~~~~~~~~~~~~g~~~g~~l~~~l~~-----~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (420)
|+..-|+..+..-.|.++|...-.++.+ ..+-|.++++.+...++..+..+++||+..+..
T Consensus 440 R~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~pEtk~~~l 505 (538)
T KOG0252|consen 440 RSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLIPETKGKSL 505 (538)
T ss_pred hhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEeecccccCH
Confidence 9999999999999999999999999988 678999999999999988888889998765443
No 267
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.63 E-value=3.2e-06 Score=79.58 Aligned_cols=134 Identities=11% Similarity=0.043 Sum_probs=92.3
Q ss_pred hhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcC--CCcHHHHHHHHHHHHHhh
Q 014698 258 EAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDL--GLPHWEIVGILTAGLALS 335 (420)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~ 335 (420)
+.++..+...++..+|+++.|.+.||+||| .....+.....++..+....+ .+.....+.-++.|++.+
T Consensus 47 ~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk---------~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g 117 (451)
T PF00083_consen 47 LSSLLTSSFFIGAIVGALIFGFLADRYGRK---------PALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIG 117 (451)
T ss_pred HHHHHHHHHHhhhccccccccccccccccc---------ccccccccccccccccccccccccccccccccccccccccc
Confidence 457788899999999999999999999964 333344444444444433333 123444445578899888
Q ss_pred hhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccC--CceeeeehhhhHHHHHH
Q 014698 336 SFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDST--HSWSMSLFAPSIFFYLT 400 (420)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~--~~~~~~~~~~~~~~~~~ 400 (420)
...........|..|+++|+...++.+....+|..++..+.-.+.+.. ..|+..+.+.++..++.
T Consensus 118 ~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~ 184 (451)
T PF00083_consen 118 GAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLV 184 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 777777777778889999999999999888888888776654443222 13776666655544433
No 268
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=97.62 E-value=0.024 Score=54.37 Aligned_cols=119 Identities=20% Similarity=0.106 Sum_probs=88.0
Q ss_pred hhhhcchhhhcc-hhHHHHHHHHHHHHHHHHHHHhh--c-------------------h---HHHHHHHHHHHHhccccc
Q 014698 51 ELLRLPLLFVTW-IRKVLQTGVLIWSLATALLPLLA--G-------------------F---MPGLVLSRVLVGIGEGVS 105 (420)
Q Consensus 51 ~l~~~p~~~~~~-~r~~~~~~~~~~~~~~~~~~~~~--~-------------------~---~~~l~~~r~l~G~~~~~~ 105 (420)
.+.+..+.|-+. |-+++.++.++..++..+....+ + + ...+..+.-+..+|.|+.
T Consensus 90 ~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~ 169 (571)
T KOG1237|consen 90 PLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGI 169 (571)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCC
Confidence 466666677776 66788888877777755443211 0 0 124666667778899999
Q ss_pred hhhhHHHHHhcCC---c-c--ccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHH
Q 014698 106 PSAATDLIARSIP---L-E--ERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFS 169 (420)
Q Consensus 106 ~~~~~~~i~~~~~---~-~--~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~ 169 (420)
-|...+.-+|-++ + + ++...+.++....+.|..++..+..+..++.+|.+.|.+..+...+.++
T Consensus 170 r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~ 239 (571)
T KOG1237|consen 170 RPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAIL 239 (571)
T ss_pred CCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHH
Confidence 9999999999998 3 2 2347788899999999999999999998889999999887776655443
No 269
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.49 E-value=0.0013 Score=55.43 Aligned_cols=131 Identities=15% Similarity=0.091 Sum_probs=85.0
Q ss_pred chhhhhHHhHHhh---hhcchhhhcchhHHHHHHHHHHHHH-HHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHh
Q 014698 40 GRIYLKDTNLLEL---LRLPLLFVTWIRKVLQTGVLIWSLA-TALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIAR 115 (420)
Q Consensus 40 ~~l~~~~~~~~~l---~~~p~~~~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~ 115 (420)
+.+.+..+.+.+. +.+.+.|++|++-+.+.+..+..+. -....+ +++.=.....+.|+..+..-...-..++.
T Consensus 303 ~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~F---t~lsPy~~m~~lGLsysllAcslWP~va~ 379 (459)
T KOG4686|consen 303 GNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFF---TFLSPYTSMTFLGLSYSLLACSLWPCVAS 379 (459)
T ss_pred cchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHh---hhccHHHHHHHHhhhHHHHHHHHhhhhhh
Confidence 4444444444433 3444588888887666655554443 333322 23333466677888766555556677888
Q ss_pred cCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccc---hhHHHHH-HHHHHHHHHHHhhh
Q 014698 116 SIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLG---WESVFYI-FGLLGIAWFSGFKI 173 (420)
Q Consensus 116 ~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g---wr~~f~~-~~~~~~~~~~~~~~ 173 (420)
..|+++.|.+.|..+...++|..+-|++++.+.+.-| |-..|.+ .+.+++....+.+.
T Consensus 380 ~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~~ 441 (459)
T KOG4686|consen 380 LVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILFY 441 (459)
T ss_pred hCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999998544 5445544 44444444333333
No 270
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.08 E-value=0.033 Score=50.57 Aligned_cols=159 Identities=12% Similarity=-0.040 Sum_probs=99.1
Q ss_pred HHhhhhhhHhhhh-hCCCcchhhHHHHhhHH-HHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhc
Q 014698 239 TCLSWLPTYFSEE-LSLNLTEAAWVSILPPL-ASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSID 316 (420)
Q Consensus 239 ~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (420)
....++..|+.+. .|++.++..--.-+... ..++..+....+.|.++. |..++...+...+...+....
T Consensus 21 PsEPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Y---------kpviil~~~~~i~t~~lll~~ 91 (412)
T PF01770_consen 21 PSEPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRY---------KPVIILQALSYIITWLLLLFG 91 (412)
T ss_pred CCCccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhh---------hHHHHHHHHHHHHHHHHHHHH
Confidence 3456888888876 79988887544333333 445555667789999984 455555555544444444443
Q ss_pred CCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccC-CceeeeehhhhH
Q 014698 317 LGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDST-HSWSMSLFAPSI 395 (420)
Q Consensus 317 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~-~~~~~~~~~~~~ 395 (420)
. +....-+.-+..|...+. -......+-..+|+++.-++.+......-+|..++..++-.+.+.. .++....++...
T Consensus 92 ~-sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~ 169 (412)
T PF01770_consen 92 T-SVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLA 169 (412)
T ss_pred C-cHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 3 244444555667776653 3333344456678999999999999999999999888888777632 245544445444
Q ss_pred HHHHHHHHHhhhc
Q 014698 396 FFYLTGTIVWLAF 408 (420)
Q Consensus 396 ~~~~~~~~~~~~~ 408 (420)
...++.++.+++.
T Consensus 170 ~~~~a~~~~~fLP 182 (412)
T PF01770_consen 170 SVSLALLIALFLP 182 (412)
T ss_pred HHHHHHHHHHHcC
Confidence 4444444444443
No 271
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.03 E-value=0.086 Score=41.08 Aligned_cols=108 Identities=10% Similarity=-0.071 Sum_probs=72.6
Q ss_pred HHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhh
Q 014698 263 SILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGL 342 (420)
Q Consensus 263 ~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 342 (420)
.++......+..++.+.+.+++|. |+.+..+.+...+........ +.+..+....+.|++.+......-
T Consensus 43 lai~Y~~~~~s~l~~P~iv~~lg~---------K~sm~lg~~~y~~y~~~~~~~--~~~~l~~~s~l~G~~~a~lW~aqg 111 (156)
T PF05978_consen 43 LAILYGSFAISCLFAPSIVNKLGP---------KWSMILGSLGYAIYIASFFYP--NSYTLYPASALLGFGAALLWTAQG 111 (156)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHhh---------HHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHhhhhHHhhHhhh
Confidence 355556667777888889999994 455555555444443333222 244555666788888886666655
Q ss_pred hhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhc
Q 014698 343 YCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLD 381 (420)
Q Consensus 343 ~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 381 (420)
..+.+...++.+++..++.-.+.+.+..+|..+.-.+..
T Consensus 112 ~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~~ 150 (156)
T PF05978_consen 112 TYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIFQ 150 (156)
T ss_pred HHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 556666677889999999988888888888876655543
No 272
>PRK03612 spermidine synthase; Provisional
Probab=96.99 E-value=0.043 Score=52.33 Aligned_cols=166 Identities=16% Similarity=0.007 Sum_probs=85.1
Q ss_pred HHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhH
Q 014698 228 YAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPA 307 (420)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~ 307 (420)
+..++..++...+.......+...+|.+....+.+.+.+-.+..+|+.+++++.++..++ .-..-+.++++...
T Consensus 21 ~~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~------~~~~e~~i~l~~~~ 94 (521)
T PRK03612 21 AAVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAG------FVAVELLLALLGGL 94 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHH------HHHHHHHHHHHHHH
Confidence 344444555555556666666666788888888888888888888888777765332211 00011111111111
Q ss_pred HHHHHHhhc-C-CCc-HHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhc-cC
Q 014698 308 VCMTLSSID-L-GLP-HWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLLD-ST 383 (420)
Q Consensus 308 ~~~~~~~~~-~-~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~-~~ 383 (420)
...++.... . ... .......+..++..|...+...- .......++.+...|-......+|+.+|+.+.+.+.- ..
T Consensus 95 ~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~G~~~Pl~~~-~~~~~~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~l 173 (521)
T PRK03612 95 SALILYAAFAFQGLSRLLLYVLVLLIGLLIGMEIPLLMR-ILQRIRDQHLGHNVATVLAADYLGALVGGLAFPFLLLPRL 173 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhccccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhc
Confidence 111111100 0 001 11122233445555544333332 2233333346777888889999999999999988764 55
Q ss_pred CceeeeehhhhHHHHHHH
Q 014698 384 HSWSMSLFAPSIFFYLTG 401 (420)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~ 401 (420)
|... ..++.+.+.++++
T Consensus 174 G~~~-t~~~~a~l~~~~a 190 (521)
T PRK03612 174 GLIR-TAALTGSLNLLAA 190 (521)
T ss_pred chHH-HHHHHHHHHHHHH
Confidence 4333 3333344343333
No 273
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.95 E-value=0.08 Score=48.89 Aligned_cols=176 Identities=12% Similarity=0.159 Sum_probs=99.8
Q ss_pred HHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHH-
Q 014698 222 AVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQT- 300 (420)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~- 300 (420)
..+.+....++..+..-...+-.|.++.+.+.-+..-.+.......+..++..+..|.+.||..|.+.- |.....
T Consensus 3 ~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~----~~~l~~Q 78 (432)
T PF06963_consen 3 ALWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVI----RTSLVVQ 78 (432)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhH----HHHHHHH
Confidence 445667788888888888888999999998776666666666777778888888899999998765321 111111
Q ss_pred -HHHHHhHHHHHHHhhcCCC---cHHHHHHH----HHHHHHhhhhhhhhhhhhh-h-------ccCccchHHHHHHHHHh
Q 014698 301 -IAFLSPAVCMTLSSIDLGL---PHWEIVGI----LTAGLALSSFALSGLYCTH-Q-------DISPEYASILLGITNTV 364 (420)
Q Consensus 301 -~~~~~~~~~~~~~~~~~~~---~~~~~~~~----~~~g~~~~~~~~~~~~~~~-~-------~~~~~~~g~~~g~~~~~ 364 (420)
.........+......... ..+....+ ...+...- .......... . +-+++...+.++...-+
T Consensus 79 n~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~-Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRI 157 (432)
T PF06963_consen 79 NLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIER-LASIANTIAVERDWVVVIAGGDPGALARMNATMRRI 157 (432)
T ss_pred HHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHH-HHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHH
Confidence 1122222222211111111 01111111 11121111 1111111111 1 11345566677777777
Q ss_pred hhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHH
Q 014698 365 GAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTI 403 (420)
Q Consensus 365 ~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 403 (420)
-.+...++|.+.|.+.+.. ++.....+.++..+++...
T Consensus 158 DL~ckllaPl~vG~l~t~~-s~~~~~~~i~~~N~~S~~v 195 (432)
T PF06963_consen 158 DLFCKLLAPLFVGLLMTFA-SPVIAAIFIAGWNLASVFV 195 (432)
T ss_pred HHHHHHHHHHHHHHHhhcc-CHHHHHHHHHHHHHHHHHH
Confidence 7789999999999999875 5555555555555555443
No 274
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=96.89 E-value=0.036 Score=49.92 Aligned_cols=269 Identities=14% Similarity=0.060 Sum_probs=118.6
Q ss_pred HHHHHHHHHHHHhccccchhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhH---HHhhhc--cchhHHHHHHHH
Q 014698 88 MPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLA---PPIIEN--LGWESVFYIFGL 162 (420)
Q Consensus 88 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~---~~l~~~--~gwr~~f~~~~~ 162 (420)
+...++.-.+.+.+.+......+...++. |+|.- .-+.++.+++..+..++- ....+. -+=-.-|.+..+
T Consensus 117 f~vt~~~vv~~~~a~a~~qgs~~G~a~~~-P~~yt----qavm~G~a~aG~l~Sl~~i~tka~~~~~~~sA~~yF~~s~~ 191 (406)
T KOG1479|consen 117 FLVTLIIVVLLNLANAVVQGSLYGLAGLF-PSEYT----QAVMSGQALAGTLTSLLRILTKAAFSDSRTSALIYFITSTV 191 (406)
T ss_pred HHHHHHHHHHHhhhhhhhccchhhhhhcC-CHHHH----HHHHhcchhHhHHHHHHHHHHHHhcCCCCceeehhHHHHHH
Confidence 55667777888888888877777777765 54432 223344444444443332 111111 111222344444
Q ss_pred HHHHHHHHhhhcccCcccCCCCcC-ccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHh
Q 014698 163 LGIAWFSGFKILQEGETSNGATLA-PRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCL 241 (420)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (420)
..+++.+.+..+|+.|..+..+++ ++++.+..+++. .++...+....+.++++|+-.-. .+.....+....
T Consensus 192 ~~llC~i~y~~l~~lpf~~yy~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~i~~k~~~~-----~~~i~lvy~VTL 263 (406)
T KOG1479|consen 192 ILLLCFVLYLVLPKLPFVRYYREKAGSIGSKLAAEGI---ESDSSLSNEDDSLWDIFKKIKDL-----AFNIFLVYFVTL 263 (406)
T ss_pred HHHHHHHHHHHhhcchHHHHHhhhccccccccccccc---ccccccccccchHHHHHHHHHHH-----hhchheeeeeee
Confidence 455566666666655432111110 000000000000 00000001111344444432111 111222333344
Q ss_pred hhhhhHhhhhhCCC---cchhhHHHHh-hHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHH---HHHhHHHHHH--
Q 014698 242 SWLPTYFSEELSLN---LTEAAWVSIL-PPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIA---FLSPAVCMTL-- 312 (420)
Q Consensus 242 ~~~~~~~~~~~g~~---~~~~~~~~~~-~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-- 312 (420)
...|-+..+..+-+ ....-+.... ..+...+|.+...+..++-. |....... .......+.-
T Consensus 264 siFPg~~~~~~~~~~~~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~~~---------r~l~i~v~lR~lfiPlF~~cn~~ 334 (406)
T KOG1479|consen 264 SIFPGFCSEVKSSGLLGDWYALLLVFLSFNVFDLIGSILAALLTWPDP---------RKLTIPVLLRLLFIPLFLLCNYP 334 (406)
T ss_pred EecchhhcccccCcccchhhHHHHHHHHhHHHHHhhhhhhhcccCCCC---------ceehHHHHHHHHHHHHHHHhccC
Confidence 56777776643222 2222333334 56667777665555444321 11111111 1111111110
Q ss_pred -HhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHH
Q 014698 313 -SSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYL 379 (420)
Q Consensus 313 -~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l 379 (420)
......+..+......++|+..|-.....+....+.++++++-.+-.+.......|-+.|. +.+++
T Consensus 335 ~~~v~~~~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~-~~s~l 401 (406)
T KOG1479|consen 335 PLPVVFESDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGS-LLSWV 401 (406)
T ss_pred CCCceecCchHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhh-HHHHH
Confidence 1111234556666667788888866666666666777777766555555554444444444 34443
No 275
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=96.55 E-value=0.0081 Score=54.40 Aligned_cols=152 Identities=14% Similarity=0.084 Sum_probs=96.1
Q ss_pred HHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHH
Q 014698 221 KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQT 300 (420)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 300 (420)
+.........+...++...-..+.|.|+++. |.+....+.+....-+.+.+.+++.|..+||...|--+ ||..+.
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~~l-Gvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GR----RRPfI~ 106 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQSL-GVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGR----RRPFIL 106 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHHHc-CCCcccccccccccccccceeccccccccccccccccc----ccchHH
Confidence 3444455555556677777788999999985 99999999998888899999999999999986433221 444444
Q ss_pred HHHHHhHHHHHHHhhcC----------CC-cHHHHHHHHHHHH-----HhhhhhhhhhhhhhhccCccchHH-HHHHHHH
Q 014698 301 IAFLSPAVCMTLSSIDL----------GL-PHWEIVGILTAGL-----ALSSFALSGLYCTHQDISPEYASI-LLGITNT 363 (420)
Q Consensus 301 ~~~~~~~~~~~~~~~~~----------~~-~~~~~~~~~~~g~-----~~~~~~~~~~~~~~~~~~~~~~g~-~~g~~~~ 363 (420)
.......+.+.+..... .. .....+.++++|+ .......+.-....+...++++.+ +++....
T Consensus 107 ~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~ 186 (498)
T KOG0637|consen 107 AGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSF 186 (498)
T ss_pred HhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHH
Confidence 44444444443332211 11 1112223333333 333445555556666655555555 9999999
Q ss_pred hhhhhHHHHHHHHH
Q 014698 364 VGAVPGIVGVALTG 377 (420)
Q Consensus 364 ~~~~g~~~~~~~~g 377 (420)
+..+|+.+|-.+.+
T Consensus 187 f~avGnvLGY~~g~ 200 (498)
T KOG0637|consen 187 FMAVGNVLGYALGS 200 (498)
T ss_pred HHHhcceeeeeccc
Confidence 99998888776665
No 276
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=96.51 E-value=0.11 Score=45.46 Aligned_cols=134 Identities=16% Similarity=0.085 Sum_probs=80.6
Q ss_pred HHhhhhhhHhhhhhCCCc--chhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhc
Q 014698 239 TCLSWLPTYFSEELSLNL--TEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSID 316 (420)
Q Consensus 239 ~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (420)
......+.+..+. +.+. ...++......+...++.++.|.+.||.|+| +... ................
T Consensus 20 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~-------~~~~--~~~~~~~~~~~~~~~~ 89 (338)
T COG0477 20 LLSPALPLLLSTL-SLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRR-------KVLI--IGLLLFLLGTLLLALA 89 (338)
T ss_pred hHHHHHHHHHHHc-CCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccch-------HHHH--HHHHHHHHHHHHHHhC
Confidence 3344555555543 4444 4678888888888888889999999999754 2222 2221111111122222
Q ss_pred CC-CcHHHHHHHHHHHHHhhhhhhhhhhhhhhccCc-cchHHHHHHHHH-hhhhhHHHHHHHHHHHhcc
Q 014698 317 LG-LPHWEIVGILTAGLALSSFALSGLYCTHQDISP-EYASILLGITNT-VGAVPGIVGVALTGYLLDS 382 (420)
Q Consensus 317 ~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~-~~~~g~~~~~~~~g~l~~~ 382 (420)
.. ............|++.+...+.......+..|+ ++++...+.... ...++..++|.+.+.+.+.
T Consensus 90 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T COG0477 90 PNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA 158 (338)
T ss_pred ccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 21 123333333445666665555666666666666 678888888888 5778888888777777655
No 277
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=96.40 E-value=0.00056 Score=65.18 Aligned_cols=166 Identities=14% Similarity=0.179 Sum_probs=2.0
Q ss_pred HHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHh
Q 014698 235 WGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSS 314 (420)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (420)
....++....-+-++++++++..+.|++.+...++.++..++..++.+|..| .++ +..+.++.++..+++.
T Consensus 16 ~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hr--------prw-ig~g~~~~~~g~~l~~ 86 (539)
T PF03137_consen 16 MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHR--------PRW-IGIGALLMGLGSLLFA 86 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC--------cce-eeecHHHHHHHHHHHh
Confidence 4444555544456677899999999999999999999999888888777542 223 3333333333322221
Q ss_pred hcC--------------------------------------------C-----CcHHHHHHHHHHHHHhhhhhhhhhhhh
Q 014698 315 IDL--------------------------------------------G-----LPHWEIVGILTAGLALSSFALSGLYCT 345 (420)
Q Consensus 315 ~~~--------------------------------------------~-----~~~~~~~~~~~~g~~~~~~~~~~~~~~ 345 (420)
.+. . .....+++-++.|++.....+...+.+
T Consensus 87 lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYi 166 (539)
T PF03137_consen 87 LPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYI 166 (539)
T ss_dssp -----------------------------------------------------------------SSS------------
T ss_pred ccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeee
Confidence 100 0 001122333566666666666666666
Q ss_pred hhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhcc---------------------CCceeeeehhhhHHHHHHHHHH
Q 014698 346 HQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDS---------------------THSWSMSLFAPSIFFYLTGTIV 404 (420)
Q Consensus 346 ~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~---------------------~~~~~~~~~~~~~~~~~~~~~~ 404 (420)
-+.+++++.+...|+..+...+|-++|=.+++...+. .|.|-..|++.+...++.++.+
T Consensus 167 DDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl 246 (539)
T PF03137_consen 167 DDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPL 246 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6678889999999999998888888887777766532 1234455666666555555555
Q ss_pred hhhcc
Q 014698 405 WLAFA 409 (420)
Q Consensus 405 ~~~~~ 409 (420)
+.+.+
T Consensus 247 ~~FPk 251 (539)
T PF03137_consen 247 FFFPK 251 (539)
T ss_dssp -----
T ss_pred HcCCc
Confidence 55443
No 278
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=96.33 E-value=0.035 Score=37.86 Aligned_cols=50 Identities=18% Similarity=0.330 Sum_probs=41.6
Q ss_pred HHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhh
Q 014698 235 WGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLI 285 (420)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~ 285 (420)
.+-+.+...+|...+| .++|..+.+++.+...++..+|.+...++.++..
T Consensus 6 igRFayTplLP~M~~~-~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~ 55 (85)
T PF06779_consen 6 IGRFAYTPLLPLMQAD-GGLSLSQAGWLASANYLGYLVGALLASRLPRHSR 55 (85)
T ss_pred hHHHHHHhHhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 4455667788887776 4999999999999999999999999998887744
No 279
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=96.26 E-value=0.36 Score=45.27 Aligned_cols=150 Identities=11% Similarity=0.052 Sum_probs=81.7
Q ss_pred cHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCC-----CcchhhHHHHhhHHHHHHH-HHhhhhhhhhhhhcCcchHH
Q 014698 220 SKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSL-----NLTEAAWVSILPPLASVLV-TSIAAQFADNLIATGVETTM 293 (420)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-----~~~~~~~~~~~~~~~~~~~-~~~~g~l~dr~~~~~~~~~~ 293 (420)
.|++....+..++..+.++..-. ++|.... +.+...++.+...+...+. .++.+++++|++++
T Consensus 6 ~~k~~~~~l~fF~il~~Y~iLR~-----lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~------ 74 (472)
T TIGR00769 6 LKKFLPLFLMFFCILFNYTILRD-----TKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKE------ 74 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-----hhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHH------
Confidence 35666666666666555544433 3454444 3356677766665655555 78889999999875
Q ss_pred HHHHHHHHHHHHhHHHHHHHh--hcCCC-------------------------cHHHHHHHHHHHHHhhhhhhh-hhhhh
Q 014698 294 VRKICQTIAFLSPAVCMTLSS--IDLGL-------------------------PHWEIVGILTAGLALSSFALS-GLYCT 345 (420)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~--~~~~~-------------------------~~~~~~~~~~~g~~~~~~~~~-~~~~~ 345 (420)
+..............+.... ...+. ..|......+..-..+..... ..+..
T Consensus 75 -~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~f 153 (472)
T TIGR00769 75 -ALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGF 153 (472)
T ss_pred -HhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222222221111111111 01110 011222222222222222222 33333
Q ss_pred h-hccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhc
Q 014698 346 H-QDISPEYASILLGITNTVGAVPGIVGVALTGYLLD 381 (420)
Q Consensus 346 ~-~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 381 (420)
. +...+++..+-.++.....++|..+++.+..++.+
T Consensus 154 andi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~ 190 (472)
T TIGR00769 154 ANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSK 190 (472)
T ss_pred HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 44677889999999999999999999999888773
No 280
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=96.05 E-value=0.045 Score=50.09 Aligned_cols=86 Identities=8% Similarity=0.060 Sum_probs=68.1
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhccCcc---chHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHH
Q 014698 321 HWEIVGILTAGLALSSFALSGLYCTHQDISPE---YASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFF 397 (420)
Q Consensus 321 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~ 397 (420)
....+++.+++++.|..=+.......+.++++ ++.+.........++|+.+++.+.+++.++. +|...|.+.++..
T Consensus 34 ~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~-~~~~~f~i~~~~~ 112 (372)
T PF00854_consen 34 GLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNY-GWFLGFGIPAIGM 112 (372)
T ss_dssp CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS--HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhcccc-chhhhhhHHHHHH
Confidence 45677778889999988888888888887654 5778888889999999999999999999886 8888898887766
Q ss_pred HHHHHHHhhh
Q 014698 398 YLTGTIVWLA 407 (420)
Q Consensus 398 ~~~~~~~~~~ 407 (420)
+++.+..+.-
T Consensus 113 ~~~~~~f~~~ 122 (372)
T PF00854_consen 113 LLALIVFLSG 122 (372)
T ss_dssp HHHHHHHHCC
T ss_pred HHHHHHHHhC
Confidence 6655544433
No 281
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.80 E-value=0.032 Score=54.24 Aligned_cols=163 Identities=10% Similarity=0.175 Sum_probs=104.2
Q ss_pred HHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhc--
Q 014698 239 TCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSID-- 316 (420)
Q Consensus 239 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 316 (420)
++....-+-+++.++++..+.|++.+..-++..+...+..+...|..|. ..+..+.+..++..++..++
T Consensus 114 ~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrP---------r~Ig~G~~~m~lgsll~alPHf 184 (735)
T KOG3626|consen 114 GYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRP---------RWIGIGLVLMGLGSLLFALPHF 184 (735)
T ss_pred hhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCcc---------ceeeechhHHHHHHHHHhChHH
Confidence 5555555667788999999999999999999998888888887777643 22222222222222221110
Q ss_pred ------------------C---------------------------C-Cc-H--HHHHHHHHHHHHhhhhhhhhhhhhhh
Q 014698 317 ------------------L---------------------------G-LP-H--WEIVGILTAGLALSSFALSGLYCTHQ 347 (420)
Q Consensus 317 ------------------~---------------------------~-~~-~--~~~~~~~~~g~~~~~~~~~~~~~~~~ 347 (420)
. . +. . .++++.++.|++.....+...+.+-+
T Consensus 185 ~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDD 264 (735)
T KOG3626|consen 185 FSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDD 264 (735)
T ss_pred hcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccc
Confidence 0 0 00 1 22333466677766666666666656
Q ss_pred ccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccC------------------CceeeeehhhhHHHHHHHHHHhhhcc
Q 014698 348 DISPEYASILLGITNTVGAVPGIVGVALTGYLLDST------------------HSWSMSLFAPSIFFYLTGTIVWLAFA 409 (420)
Q Consensus 348 ~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (420)
.+.+++.....|+..++..+|-++|=.+++.+...+ |.|-..|++.+.+.++..+.++++.+
T Consensus 265 nvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk 344 (735)
T KOG3626|consen 265 NVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPK 344 (735)
T ss_pred cccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 677888999999999999888888888888776422 22344566666666666666655554
Q ss_pred C
Q 014698 410 S 410 (420)
Q Consensus 410 ~ 410 (420)
+
T Consensus 345 ~ 345 (735)
T KOG3626|consen 345 E 345 (735)
T ss_pred c
Confidence 3
No 282
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=95.01 E-value=3 Score=38.83 Aligned_cols=225 Identities=11% Similarity=-0.008 Sum_probs=118.4
Q ss_pred hhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhh--------ch-----------------------HHHHHHHHHHHHh
Q 014698 52 LLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLA--------GF-----------------------MPGLVLSRVLVGI 100 (420)
Q Consensus 52 l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~--------~~-----------------------~~~l~~~r~l~G~ 100 (420)
.+..-++++.-+++++-.-+..+....+++++.- ++ .|...+.-.+.=+
T Consensus 80 ~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aEL 159 (509)
T COG3202 80 IIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAEL 159 (509)
T ss_pred HHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHH
Confidence 3333446666688887777777666666665421 11 0222222222222
Q ss_pred ccccchh-hhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhcc-c---------hhHHHHHHHHHHHHHHH
Q 014698 101 GEGVSPS-AATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL-G---------WESVFYIFGLLGIAWFS 169 (420)
Q Consensus 101 ~~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-g---------wr~~f~~~~~~~~~~~~ 169 (420)
=.+.... .-.....|.+..+|-.|..+.++.+.+++..++..+..++.++- . -+..+.+.+..++++..
T Consensus 160 WgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~~~~~~~~~~~~vi~~~~~i~~~ 239 (509)
T COG3202 160 WGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKHRDALASEFKDLLLQILFIVIVILGIIAIL 239 (509)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222222 23456788888899999999999999999999998888887621 1 33444555555555555
Q ss_pred HhhhcccCcccCCCCcCccchhhhhhhhhhhhhhhhcccccccchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhh
Q 014698 170 GFKILQEGETSNGATLAPRSNYINMKKSLSASLEEMGESLKDVPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFS 249 (420)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (420)
+..++.+.-.+.+.-..+..+ +..++..+..-..+++.+.|+|.++...+...+++.+...+....-.-.+
T Consensus 240 l~~~~~r~il~~~~f~~~~~~---------kk~~~k~k~~~~~s~k~i~~SkyL~~ial~vl~Y~v~inLvE~~wKs~ik 310 (509)
T COG3202 240 LYRYINRNVLTDPLFYLRAKK---------KKKKKKLKLGLIESFKMILRSKYLGAIALLVLAYGVSINLVEGVWKSGIK 310 (509)
T ss_pred HHHHHHhhcccCcchhHHHhc---------ccccccccCcHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 555443322111110000000 00000000011123556778888888888877777776665543322333
Q ss_pred hhhCCCcchh---hHHHHhhHHH-HHHHHHhhhhhhhhhh
Q 014698 250 EELSLNLTEA---AWVSILPPLA-SVLVTSIAAQFADNLI 285 (420)
Q Consensus 250 ~~~g~~~~~~---~~~~~~~~~~-~~~~~~~~g~l~dr~~ 285 (420)
+.+..+.+.. |.+....++. .++...+++.+.+|.|
T Consensus 311 ~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~G 350 (509)
T COG3202 311 ELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVG 350 (509)
T ss_pred HhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhh
Confidence 3333333322 3333444444 3444556778888877
No 283
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=94.78 E-value=0.25 Score=41.82 Aligned_cols=158 Identities=11% Similarity=0.080 Sum_probs=79.9
Q ss_pred HhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHH
Q 014698 247 YFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVG 326 (420)
Q Consensus 247 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (420)
|+-+.+|+...++|.++.......++...+.|-+.||.|||| .-. ...+....+.+ .-..++ .....+.
T Consensus 62 yLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKr-------acv--tycitYiLsCi-TKhSpq-YkVLmVG 130 (454)
T KOG4332|consen 62 YLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKR-------ACV--TYCITYILSCI-TKHSPQ-YKVLMVG 130 (454)
T ss_pred eeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhcccc-------cee--eehHHHHHHHH-hhcCCc-eEEEeeh
Confidence 444567898999998877766677777788899999999863 211 11111111111 111111 1222333
Q ss_pred HHHHHHHhhhhhhhhh-hhhhhcc-----CccchHHHHHHHH-HhhhhhHHHHHHHHHHHhccCC-ceeeeehhhhHHHH
Q 014698 327 ILTAGLALSSFALSGL-YCTHQDI-----SPEYASILLGITN-TVGAVPGIVGVALTGYLLDSTH-SWSMSLFAPSIFFY 398 (420)
Q Consensus 327 ~~~~g~~~~~~~~~~~-~~~~~~~-----~~~~~g~~~g~~~-~~~~~g~~~~~~~~g~l~~~~~-~~~~~~~~~~~~~~ 398 (420)
=.+-|+.........- +.+.+.. +.+-.....+=.. ....+-.+++...+-.+.|+.+ +.-.+|-..+.+..
T Consensus 131 R~LGGiaTsLLFSaFEsWliaEHnekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLa 210 (454)
T KOG4332|consen 131 RVLGGIATSLLFSAFESWLIAEHNEKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLA 210 (454)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHhhhccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHH
Confidence 3444444443332222 2233322 2222222222222 2233555566666666677653 45567777666666
Q ss_pred HHHHHHhhhccCCCCCC
Q 014698 399 LTGTIVWLAFASSKPQN 415 (420)
Q Consensus 399 ~~~~~~~~~~~~~~~~~ 415 (420)
++..+.+--+.++-+++
T Consensus 211 igmAvil~~W~ENygdp 227 (454)
T KOG4332|consen 211 IGMAVILSSWSENYGDP 227 (454)
T ss_pred HHHHHHHhhhhhccCCh
Confidence 66555555555554443
No 284
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=94.69 E-value=0.16 Score=46.23 Aligned_cols=64 Identities=20% Similarity=0.125 Sum_probs=58.7
Q ss_pred hchHHHHHHHHHHHHhccccchhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhh
Q 014698 85 AGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPII 148 (420)
Q Consensus 85 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~ 148 (420)
.++.|..++.-+..|+..|..++.....+.|-.|+++|..++|..+.+-+.|..++..++-.+-
T Consensus 332 ipsi~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le 395 (402)
T PF02487_consen 332 IPSIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLE 395 (402)
T ss_pred hhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 5788889999999999999999999999999999999999999999999999999998886554
No 285
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=93.91 E-value=0.017 Score=51.19 Aligned_cols=56 Identities=16% Similarity=0.252 Sum_probs=2.9
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHH
Q 014698 321 HWEIVGILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALT 376 (420)
Q Consensus 321 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~ 376 (420)
.+.++..+++|+..|-.....+....+.+++++|..+-.+.......|-.+|..+.
T Consensus 249 ~~~~i~~~l~g~TNGyl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls 304 (309)
T PF01733_consen 249 AWFIILMLLFGFTNGYLSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLS 304 (309)
T ss_dssp ------------------HHHH----------------------------------
T ss_pred HHHHHHHHHHHHccchhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455567788888877777777777778888888887777777777777766543
No 286
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=93.63 E-value=0.97 Score=40.55 Aligned_cols=145 Identities=11% Similarity=0.019 Sum_probs=71.0
Q ss_pred HHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhh-----hhhhcCcchHHHH
Q 014698 221 KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFAD-----NLIATGVETTMVR 295 (420)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-----r~~~~~~~~~~~~ 295 (420)
+++..+...+..+....... ..+|.+++.. |.|-.+.+.......-- ---+++..+.| |+||| |
T Consensus 31 ~~illLl~LYllQGiP~GL~-~~iP~lL~ak-~vSyt~~a~fS~ay~P~--sLKllWaPiVDs~y~k~~Grr-------k 99 (510)
T KOG3574|consen 31 SSILLLLFLYLLQGIPLGLI-GAIPLLLQAK-GVSYTSQAIFSFAYWPF--SLKLLWAPIVDSVYSKRFGRR-------K 99 (510)
T ss_pred hhHHHHHHHHHHcCCchhHh-hhhHHHhcCC-CcchhhhhhhhhhhhHH--HHHHHHHhhhHHHHHHhhccc-------c
Confidence 45556666666655555444 4889888853 77776666554332211 12345667777 99987 4
Q ss_pred HHHHHHHHHHhHHHHHHHhhcC-------CCcHHHHH--HHHHHHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhh
Q 014698 296 KICQTIAFLSPAVCMTLSSIDL-------GLPHWEIV--GILTAGLALSSFALSGLYCTHQDISPEYASILLGITNTVGA 366 (420)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 366 (420)
.++.-.-..+...+..+..... ..+...+. .+++.-+....--...--...+...+++-|-++........
T Consensus 100 sWvvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~ 179 (510)
T KOG3574|consen 100 SWVVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQT 179 (510)
T ss_pred ceeeehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHh
Confidence 4444344444444443332211 11111111 11222222221122222223344667776666666555556
Q ss_pred hhHHHHHHHH
Q 014698 367 VPGIVGVALT 376 (420)
Q Consensus 367 ~g~~~~~~~~ 376 (420)
.|.+++..++
T Consensus 180 ~GyfL~~~if 189 (510)
T KOG3574|consen 180 AGYFLGNVVF 189 (510)
T ss_pred hhHHhhccee
Confidence 6666665444
No 287
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=93.00 E-value=4.8 Score=39.06 Aligned_cols=174 Identities=15% Similarity=0.094 Sum_probs=106.2
Q ss_pred HHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHH
Q 014698 223 VWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIA 302 (420)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 302 (420)
.......-.+...++++....+-.|+.+.++.+...+.-.............+.+++++|-+-. |-..+.++
T Consensus 39 ~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~g--------ry~tI~~~ 110 (571)
T KOG1237|consen 39 APFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLG--------RYFTINIG 110 (571)
T ss_pred HHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhH--------HHHHHHHH
Confidence 3334445556667777777888888888888888777666666666677777889999998754 33333333
Q ss_pred HHHhHHHHHHHh-------hcC-------C-----C-c----HHHHHHHHHHHHHhhhhhhhhhhhhhhccC---c-cc-
Q 014698 303 FLSPAVCMTLSS-------IDL-------G-----L-P----HWEIVGILTAGLALSSFALSGLYCTHQDIS---P-EY- 353 (420)
Q Consensus 303 ~~~~~~~~~~~~-------~~~-------~-----~-~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~---~-~~- 353 (420)
.++...+..+.. ..+ . . . ......+-...++.++.-+.....-.+.++ + +.
T Consensus 111 s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~ 190 (571)
T KOG1237|consen 111 SLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVK 190 (571)
T ss_pred HHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhh
Confidence 222222211110 000 0 0 0 122333344455666556666665556565 2 22
Q ss_pred -hHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHHHHh
Q 014698 354 -ASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGTIVW 405 (420)
Q Consensus 354 -~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (420)
...-+.......+.|..++..+.-++-|.. +|...|-+..+...++.++.+
T Consensus 191 ~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~-~w~lgf~i~~~~~~lai~iF~ 242 (571)
T KOG1237|consen 191 GIPSFFNWFYFSQNGGALLAQTVLVYIQDNV-GWKLGFGIPTVLNALAILIFL 242 (571)
T ss_pred CcccchhHHHHHHHHHHHHHHHHHHhhhhcc-cceeeccHHHHHHHHHHHHHH
Confidence 336667777778888888888888887774 899999888776666655443
No 288
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=91.83 E-value=9.6 Score=34.86 Aligned_cols=63 Identities=6% Similarity=-0.101 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhh
Q 014698 221 KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLI 285 (420)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~ 285 (420)
-.++...+...........+.+-.+.|-++..+.++ .-.......+.+.+...+...+-.|..
T Consensus 18 ~v~~i~~llGiG~LlpWN~fiTa~~y~~~~~~~~~~--~~~F~~~~~~~a~i~~ll~~~~n~~~~ 80 (406)
T KOG1479|consen 18 LVYLIFLLLGIGTLLPWNMFITASDYYYYRFPGYHN--SKNFTSSYTLAAQIPLLLFNLLNAFLN 80 (406)
T ss_pred cHHHHHHHHhcccccchHhhhccHHHHHhhcCCCch--HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444555566666666666555444444 333334444444444444444444433
No 289
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=88.90 E-value=12 Score=35.01 Aligned_cols=111 Identities=11% Similarity=-0.062 Sum_probs=75.9
Q ss_pred hhHH-HHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhh
Q 014698 259 AAWV-SILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLGLPHWEIVGILTAGLALSSF 337 (420)
Q Consensus 259 ~~~~-~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 337 (420)
+|+. .++......+..++.+.+.|+++ .|+.+..+...-......+... +.+..+..-.+.|++.+..
T Consensus 51 aGy~~~aiiY~~ftv~~l~~psiv~~i~---------~K~~lv~ga~~y~~f~~gfl~~--N~y~~yfssallG~Gaall 119 (461)
T KOG3098|consen 51 AGYYGQAIIYAFFTVSCLFAPSIVNFLG---------PKWALVIGATCYAAFPLGFLFP--NSYYLYFSSALLGFGAALL 119 (461)
T ss_pred ccHHHHHHHHHHHHHHHHhhHHHHHHhh---------HHHHHHHHhHHHHHHHHHHHhc--chHHHHHHHHHhhhhHHhe
Confidence 4444 56677777888899999999999 4466666655555444433332 2556666678888888855
Q ss_pred hhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHh
Q 014698 338 ALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLL 380 (420)
Q Consensus 338 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 380 (420)
....-....+...++.+.+..++.-.+...+..+|..+.-.+.
T Consensus 120 w~GqG~ylt~~st~~tie~Nisi~Wai~~~~li~Ggi~l~~~~ 162 (461)
T KOG3098|consen 120 WTGQGGYLTSNSTRETIERNISIFWAIGQSSLIIGGIILFIYF 162 (461)
T ss_pred ecccceehhhcCChhhHHHHHHHHHHHHHHHHHhhhHhheeee
Confidence 5555555566667788889999988888888877766554443
No 290
>PRK03612 spermidine synthase; Provisional
Probab=87.91 E-value=13 Score=35.87 Aligned_cols=70 Identities=19% Similarity=0.226 Sum_probs=47.0
Q ss_pred HHHHHHHHhccccchhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhh-hccchhHHHHHHHH
Q 014698 92 VLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPII-ENLGWESVFYIFGL 162 (420)
Q Consensus 92 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~-~~~gwr~~f~~~~~ 162 (420)
...-++.++..|...|....+..+.. .++-++..|.......+|.++|.++.+++. ..+|-....++.+.
T Consensus 114 ~~~~~~~~~l~G~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~ 184 (521)
T PRK03612 114 YVLVLLIGLLIGMEIPLLMRILQRIR-DQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGS 184 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcc-ccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 34455677777888888777666543 234567788999999999999999887655 35564433333333
No 291
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=87.43 E-value=3 Score=36.35 Aligned_cols=77 Identities=22% Similarity=0.082 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHh
Q 014698 70 GVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPI 147 (420)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l 147 (420)
-.+++.+......+ .++++...+.-+.-|+-.|..++...--+.+-.++++|-.+++....+-++|..++..++-.+
T Consensus 325 vNl~ff~~~a~~~f-tpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 325 VNLLFFLLQAWYWF-TPSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred HHHHHHHHHHHHHh-ccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 34444555555554 889999999999999888888888888888888899999999999999999998888776433
No 292
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=86.98 E-value=5.1 Score=36.03 Aligned_cols=41 Identities=12% Similarity=0.247 Sum_probs=29.5
Q ss_pred HhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHH
Q 014698 333 ALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGV 373 (420)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~ 373 (420)
+.-.+-.......++.+|.++|..+.|+.|.....-..+.-
T Consensus 399 GLW~fDlAVtqimQe~VpEseR~vv~gvqnsL~~~ldll~~ 439 (503)
T KOG2601|consen 399 GLWMFDLAVTQIMQETVPESERCVVFGVQNSLNSALDLLKD 439 (503)
T ss_pred hHHhccHHHHHHHHHhcchhhhhhhHhHHHHHHHHHHHHHH
Confidence 33344455556666778999999999999998887655543
No 293
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=86.97 E-value=22 Score=31.64 Aligned_cols=66 Identities=14% Similarity=0.075 Sum_probs=48.0
Q ss_pred HhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcC
Q 014698 50 LELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSI 117 (420)
Q Consensus 50 ~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 117 (420)
..++.+.+..+.|.|.++.++.......-... .-+.+..++-.....|++.+..+..--+|+++.-
T Consensus 74 s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~N--l~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g 139 (390)
T KOG3097|consen 74 SSMFMPLLIRFLGTKWTMVLAVFPYALYIAAN--LEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMG 139 (390)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhh--cchhHHhhccHHHhhccccccccccCcceecHHH
Confidence 34555555667778888888887776544322 3567888999999999999998887777766554
No 294
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=85.67 E-value=2.1 Score=29.30 Aligned_cols=56 Identities=21% Similarity=0.122 Sum_probs=42.8
Q ss_pred cccccchhhhhHHhHHhhhhcchhhhcchhHHHHHHHHHHHHHHHHHHHhhchHHHH
Q 014698 35 RIGRRGRIYLKDTNLLELLRLPLLFVTWIRKVLQTGVLIWSLATALLPLLAGFMPGL 91 (420)
Q Consensus 35 ~~g~~~~l~~~~~~~~~l~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l 91 (420)
.-|..++....++.+|++....+.++..+++.+..+.+...+....+++ .++++..
T Consensus 28 ~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~-~~~~~~w 83 (85)
T PF06779_consen 28 QAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMAL-THSFWLW 83 (85)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH-HhchHHH
Confidence 3455556666677778888887777777889999999999999999986 6665543
No 295
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=85.50 E-value=22 Score=30.35 Aligned_cols=24 Identities=8% Similarity=-0.180 Sum_probs=14.3
Q ss_pred HHHHHhHHHHHHHhhhhhhHhhhh
Q 014698 228 YAHFCGSWGHYTCLSWLPTYFSEE 251 (420)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~ 251 (420)
+.........++....=..|++++
T Consensus 185 ~~LAv~aGvlyGs~fvPv~Yi~~~ 208 (254)
T PF07857_consen 185 IILAVFAGVLYGSNFVPVIYIQDH 208 (254)
T ss_pred HHHHHHHHHHHhcccchHHHHHhC
Confidence 333444556667666666777765
No 296
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=84.69 E-value=26 Score=31.84 Aligned_cols=69 Identities=14% Similarity=0.163 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCc
Q 014698 221 KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGV 289 (420)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~ 289 (420)
+....+...++...++--...+....|+.+..|-+....+.....-+....+...+.|...|+..|.|.
T Consensus 27 ~~~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kv 95 (503)
T KOG2601|consen 27 STVIFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKV 95 (503)
T ss_pred ceeehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHH
Confidence 334445556666666666666677777777666555555555556666666777778888899887643
No 297
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=81.49 E-value=25 Score=33.92 Aligned_cols=24 Identities=17% Similarity=0.200 Sum_probs=11.5
Q ss_pred hhHHHHHHHHHhhhhhhhhhhhcC
Q 014698 265 LPPLASVLVTSIAAQFADNLIATG 288 (420)
Q Consensus 265 ~~~~~~~~~~~~~g~l~dr~~~~~ 288 (420)
...+.+.++...++++-..++.++
T Consensus 305 ~y~~~~~iaGy~S~~~yk~~~g~~ 328 (521)
T PF02990_consen 305 LYALTSFIAGYVSARLYKSFGGKK 328 (521)
T ss_pred HHHHHhhHHHHHHHHHHHHcCCCc
Confidence 334444444455555555555443
No 298
>PF05255 UPF0220: Uncharacterised protein family (UPF0220); InterPro: IPR007919 This family of proteins is functionally uncharacterised.
Probab=80.06 E-value=24 Score=27.85 Aligned_cols=63 Identities=11% Similarity=0.066 Sum_probs=38.4
Q ss_pred hcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhcc------chhHHHHHHHHHHHHHHHHhhhcccC
Q 014698 115 RSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENL------GWESVFYIFGLLGIAWFSGFKILQEG 177 (420)
Q Consensus 115 ~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~------gwr~~f~~~~~~~~~~~~~~~~~~~~ 177 (420)
..+|.+++.+..+.+.++.-.+...--.+=+.+.... .+...+++.++.+.+.+++.-.++++
T Consensus 13 ~~~~~~~~~~~~~~~~AGaLF~~gwWi~iDa~v~s~~~~~~~~~~~f~~~ipgI~stlgm~mvN~V~~~ 81 (166)
T PF05255_consen 13 PWFDWSEKRNAIGSYVAGALFALGWWIFIDAAVYSKHANGSDVHVTFVDWIPGIFSTLGMFMVNSVSKS 81 (166)
T ss_pred CCCCchHhHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCCccccceeeehHHHHHHHHHHhccccHH
Confidence 3455566667776666655555444444444444322 47778888888888876665555543
No 299
>PF01925 TauE: Sulfite exporter TauE/SafE; InterPro: IPR002781 This family is found in integral membrane proteins of prokaryotes which are uncharacterised.; GO: 0016021 integral to membrane
Probab=77.26 E-value=43 Score=28.24 Aligned_cols=24 Identities=13% Similarity=0.156 Sum_probs=14.5
Q ss_pred HhhHHHHHHHHHhhhhhhhhhhhc
Q 014698 264 ILPPLASVLVTSIAAQFADNLIAT 287 (420)
Q Consensus 264 ~~~~~~~~~~~~~~g~l~dr~~~~ 287 (420)
.....+.+++..++.++.+|+.++
T Consensus 200 ~~~~~~~~~G~~lG~~~~~~i~~~ 223 (240)
T PF01925_consen 200 LILLPGAFLGAFLGAKLARKIPQK 223 (240)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHH
Confidence 334455666666677777776543
No 300
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=70.99 E-value=15 Score=26.14 Aligned_cols=35 Identities=20% Similarity=0.184 Sum_probs=29.3
Q ss_pred ccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCc
Q 014698 351 PEYASILLGITNTVGAVPGIVGVALTGYLLDSTHS 385 (420)
Q Consensus 351 ~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~ 385 (420)
++.++.+.++-...-.+++++-....|++.|++-+
T Consensus 37 ~s~k~~~~a~klssefIsGilVGa~iG~llD~~ag 71 (116)
T COG5336 37 ESIKGYAQAFKLSSEFISGILVGAGIGWLLDKFAG 71 (116)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 45688888888888889999999999999998733
No 301
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=68.95 E-value=4.7 Score=34.21 Aligned_cols=155 Identities=11% Similarity=0.121 Sum_probs=82.9
Q ss_pred cchhhhhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcch
Q 014698 212 VPWKAIFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVET 291 (420)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~ 291 (420)
.+|..-+++-.+.-..+.+.+.-........|+|.|..+..+++.....++-.+..++....+.+..-. ..-|+|
T Consensus 192 m~W~~WF~~v~~YQiAllYmLsRL~iNiSQaYlaFfviddlqm~qsakAllP~v~Yl~SF~VS~v~~ei-pwngkr---- 266 (412)
T KOG4830|consen 192 MHWTSWFGHVQFYQIALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKALLPMVAYLSSFSVSMVNSEI-PWNGKR---- 266 (412)
T ss_pred ccchhhhhhhHHHHHHHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhhhhHHHHHHhhhhHHhhcccC-CcCcce----
Confidence 345566777777777888888777777788899999988888877777766666666555544432211 111111
Q ss_pred HHHHHHHHHHHHHH-hHHHHHHHhhcCCCcHHHHHHHHHHHHHhhhhhhhhhhhhhhccC--ccchHHHHHHHHHhhhhh
Q 014698 292 TMVRKICQTIAFLS-PAVCMTLSSIDLGLPHWEIVGILTAGLALSSFALSGLYCTHQDIS--PEYASILLGITNTVGAVP 368 (420)
Q Consensus 292 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~g~~~g~~~~~~~~g 368 (420)
.|.....+.+. ..++..+.....+........-+.+|+.................. .+..+...|..+.+-.+.
T Consensus 267 ---lKayYsaGgiiwifcga~ilLlpr~i~symyAisvfIGIAnAimlvtslsitavli~~~~~~~aFv~GamSF~DKlS 343 (412)
T KOG4830|consen 267 ---LKAYYSAGGIIWIFCGAVILLLPRGIKSYMYAISVFIGIANAIMLVTSLSITAVLINKNTESGAFVYGAMSFFDKLS 343 (412)
T ss_pred ---eeeeeecccHHHHHhhhheeecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCceEEEehHHHHHhhc
Confidence 22222222222 222222223334434444444455677666544444443333332 344555556656555555
Q ss_pred HHHHHH
Q 014698 369 GIVGVA 374 (420)
Q Consensus 369 ~~~~~~ 374 (420)
..++-.
T Consensus 344 ~GiA~~ 349 (412)
T KOG4830|consen 344 NGIAYQ 349 (412)
T ss_pred ccHHHH
Confidence 444433
No 302
>PF03596 Cad: Cadmium resistance transporter; InterPro: IPR004676 These proteins are members of the Cadmium Resistance (CadD) Family. To date, this family of proteins has only been found in Gram-positive bacteria. The CadD family includes two close orthologues in two Staphylococcus species that have been reported to function in cadmium resistance, and another staphylococcal protein that has been reported to possibly function in quaternary ammonium ion export.
Probab=67.31 E-value=67 Score=26.11 Aligned_cols=10 Identities=20% Similarity=0.364 Sum_probs=6.4
Q ss_pred HhhhhhhHhh
Q 014698 240 CLSWLPTYFS 249 (420)
Q Consensus 240 ~~~~~~~~~~ 249 (420)
+..|.|.+.+
T Consensus 113 igIYiP~Fa~ 122 (191)
T PF03596_consen 113 IGIYIPLFAS 122 (191)
T ss_pred EEEeehhhhc
Confidence 4457777764
No 303
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=67.16 E-value=98 Score=28.00 Aligned_cols=125 Identities=14% Similarity=-0.018 Sum_probs=55.8
Q ss_pred hCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhcCcchHHHHHHHHHHHHHHhHHHHHHHhhcCC-CcHHHHHHHHHH
Q 014698 252 LSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIATGVETTMVRKICQTIAFLSPAVCMTLSSIDLG-LPHWEIVGILTA 330 (420)
Q Consensus 252 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 330 (420)
.|-+..+.+.+.+.+-.+.-+|+.+.-++.|.--..+. ......+-.++-+...+.++.+..... ...........+
T Consensus 38 lG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~F--v~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vI 115 (508)
T COG4262 38 LGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARF--VDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVI 115 (508)
T ss_pred cCCceeehHHHHHHHHHHhchhhhhhccccCchHHHHH--HHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHH
Confidence 46666666666665555555565555444443211000 000111111222222222223333222 223334444677
Q ss_pred HHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHh
Q 014698 331 GLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVALTGYLL 380 (420)
Q Consensus 331 g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 380 (420)
|.-.|.-.+..+.+..+.. +......+.....-++|+..+..+..++.
T Consensus 116 G~LVG~EiPL~mrml~~r~--a~~k~~~s~vl~~DYLGal~~gLl~p~ll 163 (508)
T COG4262 116 GVLVGAEIPLLMRMLQRRQ--AKAKDLGSRVLTLDYLGALAGGLLWPFLL 163 (508)
T ss_pred HHHHhcchHHHHHHHHHHH--HHHHhhhhhhhhhHhhhhhhHHHHHHHHH
Confidence 7777766666666554422 11122222223336677777766666654
No 304
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=66.72 E-value=26 Score=25.03 Aligned_cols=19 Identities=16% Similarity=0.195 Sum_probs=13.0
Q ss_pred HHHHHHHHHhhhhhhhhhh
Q 014698 267 PLASVLVTSIAAQFADNLI 285 (420)
Q Consensus 267 ~~~~~~~~~~~g~l~dr~~ 285 (420)
.+++++.....||+.||+-
T Consensus 52 fIsGilVGa~iG~llD~~a 70 (116)
T COG5336 52 FISGILVGAGIGWLLDKFA 70 (116)
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 3455555666788999874
No 305
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=61.72 E-value=1.4e+02 Score=28.04 Aligned_cols=26 Identities=8% Similarity=0.192 Sum_probs=12.8
Q ss_pred HHHHHHhhhhhhhhhhhhhhccCccch
Q 014698 328 LTAGLALSSFALSGLYCTHQDISPEYA 354 (420)
Q Consensus 328 ~~~g~~~~~~~~~~~~~~~~~~~~~~~ 354 (420)
++.|.+.+ ............+|++..
T Consensus 114 ~~~g~~~~-~~q~s~~gla~~fp~~~~ 139 (437)
T TIGR00939 114 VIINSGMA-LLQGSLFGLAGVFPSTYS 139 (437)
T ss_pred HHHHhhhh-hhcccchhhcccCCHHHH
Confidence 44455544 333334444556776543
No 306
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=56.85 E-value=61 Score=30.83 Aligned_cols=63 Identities=8% Similarity=0.094 Sum_probs=32.6
Q ss_pred HHHHHHHHhHHHHHHHhhhhhhHhhh-hhCCCcchhhHHHH---hhHHHHHHHHHhhhhhhhhhhhc
Q 014698 225 AMIYAHFCGSWGHYTCLSWLPTYFSE-ELSLNLTEAAWVSI---LPPLASVLVTSIAAQFADNLIAT 287 (420)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~---~~~~~~~~~~~~~g~l~dr~~~~ 287 (420)
.+.+.++++.........-.|..+++ ..+.+-.+.+.+.. ++++=-.-+.++=....+|+|||
T Consensus 4 lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~~~fSla~~PfSlKlLWaPiVDs~y~~~~GRR 70 (544)
T PF13000_consen 4 LLVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQAIFSLASYPFSLKLLWAPIVDSVYSKRIGRR 70 (544)
T ss_pred HHHHHHHHcCcccccccccchhhhccccCCCChhHheeeeeeechhHHHHhhhhhhhhhcccccCCc
Confidence 34555566555554444678888887 12555555554322 22222222222334556688887
No 307
>PRK13629 threonine/serine transporter TdcC; Provisional
Probab=55.52 E-value=1.8e+02 Score=27.32 Aligned_cols=43 Identities=9% Similarity=-0.016 Sum_probs=28.8
Q ss_pred CccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHH
Q 014698 118 PLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGI 165 (420)
Q Consensus 118 ~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~ 165 (420)
.+++.+...++.+++.+.|...-|...+. +|-++..+..+++.
T Consensus 18 ~~~d~~W~l~l~GTAIGAGmLfLPI~~g~-----~Gf~p~lillll~~ 60 (443)
T PRK13629 18 RKSDTTWTLGLFGTAIGAGVLFFPIRAGF-----GGLIPILLMLVLAY 60 (443)
T ss_pred ccccchHHHHHHHHHHhHHHHHHHHHHhc-----chHHHHHHHHHHHH
Confidence 45667788888888888888888877654 34455555444443
No 308
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=54.02 E-value=52 Score=20.54 Aligned_cols=46 Identities=13% Similarity=0.174 Sum_probs=28.8
Q ss_pred hhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCc
Q 014698 133 LSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGE 178 (420)
Q Consensus 133 ~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~ 178 (420)
.-+|.+++...+..-...++++....+..+++++...+...+|+++
T Consensus 11 ~il~~vvgyI~ssL~~~~~n~~~~~Ii~vi~~i~~~~~~~~i~~~~ 56 (57)
T PF11151_consen 11 FILGEVVGYIGSSLTGVTYNFTTAAIIAVIFGIIVANIIAVIPKKS 56 (57)
T ss_pred HHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 4456666666665555567777777776677766655555555543
No 309
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=50.49 E-value=1.4e+02 Score=24.54 Aligned_cols=34 Identities=15% Similarity=0.295 Sum_probs=21.1
Q ss_pred cccchhhHHHHhhhhhHHHHHHhhHHHhhhccch
Q 014698 120 EERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGW 153 (420)
Q Consensus 120 ~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw 153 (420)
|++.+.-.......-++..+|..+++.+.+..+.
T Consensus 158 ~~~~~~~~~~~~~~i~~f~~Ga~~ga~l~~~~~~ 191 (209)
T PF06912_consen 158 KDRALRRALRYLLIILSFFIGAILGALLYRRLGF 191 (209)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3333344445556666677777777777777674
No 310
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=49.77 E-value=1.2e+02 Score=23.58 Aligned_cols=28 Identities=18% Similarity=0.092 Sum_probs=20.8
Q ss_pred hhhhccCccchHHHHHHHHHhhhhhHHH
Q 014698 344 CTHQDISPEYASILLGITNTVGAVPGIV 371 (420)
Q Consensus 344 ~~~~~~~~~~~g~~~g~~~~~~~~g~~~ 371 (420)
.....-++++.|+..|+-.+-.+++...
T Consensus 118 ilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 118 ILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred hcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 3345677888999999988887776554
No 311
>PRK00293 dipZ thiol:disulfide interchange protein precursor; Provisional
Probab=49.71 E-value=2.7e+02 Score=27.45 Aligned_cols=31 Identities=19% Similarity=0.221 Sum_probs=17.3
Q ss_pred CcchhhHHHHhhHHHHHHHHHhhhhhhhhhh
Q 014698 255 NLTEAAWVSILPPLASVLVTSIAAQFADNLI 285 (420)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~ 285 (420)
++...+..+..++++..+--++.+....|+.
T Consensus 323 ~~~~g~~~l~~~gLG~~~Plll~~~~~~~~l 353 (571)
T PRK00293 323 DLLLGGLTLYLLALGMGLPLILITTFGNKLL 353 (571)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 4455556666677766555455555555543
No 312
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=48.92 E-value=82 Score=27.56 Aligned_cols=35 Identities=26% Similarity=0.191 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhcc
Q 014698 68 QTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGE 102 (420)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 102 (420)
+.+.+++++.+++.....++.+.+.+.-++.+++.
T Consensus 3 ~~~~~~~~~~s~~~~l~~~~~~l~~~~~~~~~F~~ 37 (284)
T PF12805_consen 3 IATLLCFALASLLVGLLFPYPWLLILVLALLTFFF 37 (284)
T ss_pred HHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHH
Confidence 34555665666666665666666666666666653
No 313
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=47.10 E-value=7.2 Score=34.63 Aligned_cols=60 Identities=27% Similarity=0.230 Sum_probs=3.7
Q ss_pred chHHHHHHHHHHHHhccccchhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHH
Q 014698 86 GFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAP 145 (420)
Q Consensus 86 ~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~ 145 (420)
+|-+..++.-++.|+..|-.....+.+..+..++++|..+-.+.......|..+|..++-
T Consensus 246 ~~d~~~~i~~~l~g~TNGyl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~ 305 (309)
T PF01733_consen 246 NSDAWFIILMLLFGFTNGYLSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSF 305 (309)
T ss_dssp ---------------------HHHH-----------------------------------
T ss_pred cchHHHHHHHHHHHHccchhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345677888999999999999999999999999999999988888888888888887764
No 314
>PF12832 MFS_1_like: MFS_1 like family
Probab=45.17 E-value=70 Score=21.37 Aligned_cols=35 Identities=17% Similarity=0.292 Sum_probs=25.3
Q ss_pred hHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceee
Q 014698 354 ASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSM 388 (420)
Q Consensus 354 ~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~ 388 (420)
...-.|+......+...+++++.|.+.|+.+..+.
T Consensus 33 ~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~ 67 (77)
T PF12832_consen 33 SPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKV 67 (77)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHH
Confidence 34445556666677788899999999999865543
No 315
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=44.51 E-value=3e+02 Score=26.50 Aligned_cols=34 Identities=15% Similarity=0.055 Sum_probs=28.2
Q ss_pred CCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhh
Q 014698 253 SLNLTEAAWVSILPPLASVLVTSIAAQFADNLIA 286 (420)
Q Consensus 253 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~ 286 (420)
-.+.+|+.-.+...++++-++.+++|.+...+.+
T Consensus 172 itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 172 ITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4677888888888888888888888888877776
No 316
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=42.39 E-value=2.1e+02 Score=24.75 Aligned_cols=74 Identities=9% Similarity=0.039 Sum_probs=36.7
Q ss_pred chhHHHH----HHHHHHHHHHHHHHHhh----chHHHHHHHHHHHHhccccchhhhHHHHHhcC--CccccchhhHHHHh
Q 014698 62 WIRKVLQ----TGVLIWSLATALLPLLA----GFMPGLVLSRVLVGIGEGVSPSAATDLIARSI--PLEERSRAVSFVFG 131 (420)
Q Consensus 62 ~~r~~~~----~~~~~~~~~~~~~~~~~----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~--~~~~r~~~~~~~~~ 131 (420)
+||+.+. .+.+++.+..++..... .++..+++.-++.|.+.=+..++....-.|.= +|++-|...| .
T Consensus 170 kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ViL~lPhEyK~~~pk~ig~~Fg---~ 246 (267)
T PF07672_consen 170 KRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQGVILNLPHEYKGYNPKKIGIQFG---L 246 (267)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhHHHhcChhhhcCCCcceehhHHH---H
Confidence 3555443 33444555444422222 13566888888998876555555444334432 2344444444 3
Q ss_pred hhhhHHH
Q 014698 132 GLSFGSV 138 (420)
Q Consensus 132 ~~~~g~~ 138 (420)
.+++|.+
T Consensus 247 iWGfGY~ 253 (267)
T PF07672_consen 247 IWGFGYI 253 (267)
T ss_pred HHHHHHH
Confidence 4444433
No 317
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=41.83 E-value=2.3e+02 Score=24.36 Aligned_cols=17 Identities=24% Similarity=0.444 Sum_probs=8.3
Q ss_pred cHHHHHHHHHHHHhHHH
Q 014698 220 SKAVWAMIYAHFCGSWG 236 (420)
Q Consensus 220 ~~~~~~~~~~~~~~~~~ 236 (420)
+|.++......|+.-++
T Consensus 206 spifikaFsltF~aEwG 222 (294)
T KOG2881|consen 206 SPIFIKAFSLTFLAEWG 222 (294)
T ss_pred cHHHHHHHHHHHHHHhc
Confidence 45555555444444333
No 318
>COG2095 MarC Multiple antibiotic transporter [Intracellular trafficking and secretion]
Probab=39.57 E-value=2.2e+02 Score=23.51 Aligned_cols=67 Identities=18% Similarity=0.075 Sum_probs=40.3
Q ss_pred HHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchh-HHHHHHHHHHHHHHHHhhhccc
Q 014698 110 TDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWE-SVFYIFGLLGIAWFSGFKILQE 176 (420)
Q Consensus 110 ~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr-~~f~~~~~~~~~~~~~~~~~~~ 176 (420)
..-+.+-.++++|.+..-...........+....|..+.+.+|-. ..|-+.+...+.....-...++
T Consensus 27 f~slt~~~~~~~r~~v~~ra~i~a~~ill~f~~~G~~il~~fgIsi~a~rIAGGilLf~ia~~ml~~~ 94 (203)
T COG2095 27 FISLTKGLSPEERNRVALRASIIALLILLVFLLLGEGILRFFGISIDAFRIAGGILLFLIALRMLFGP 94 (203)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHhhhHHHHHHHHHHhcCC
Confidence 445667777788877776666666666666777777787766644 3455555444433333333333
No 319
>PF00909 Ammonium_transp: Ammonium Transporter Family; InterPro: IPR024041 This ammonium transporter domain consists of a duplication of 2 structural repeats of five helices each plus one extra C-terminal helix. It has been described as a channel that spans the membrane 11 times [].; PDB: 3B9Z_A 3B9Y_A 3B9W_A 3BHS_A 2B2H_A 2B2J_A 2B2F_A 2B2I_A 2NPG_A 2NUU_E ....
Probab=38.87 E-value=3.3e+02 Score=25.35 Aligned_cols=34 Identities=24% Similarity=0.402 Sum_probs=22.9
Q ss_pred cccchhhHHHHhhhhhHHHHHHhhHHHhhhccch
Q 014698 120 EERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGW 153 (420)
Q Consensus 120 ~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw 153 (420)
.||.+...+.....-++..+-|+++-+.-...||
T Consensus 107 aeR~~~~~~ii~~~l~~~~vy~~~~~w~w~~~Gw 140 (399)
T PF00909_consen 107 AERIKFSAYIIFGFLWGGLVYPPLAHWVWGENGW 140 (399)
T ss_dssp CCCCHHHHHHHHHHHCCCCTHHHHHHHHHCHCHH
T ss_pred eceeeehHHHHHHHHHhhhhccccceEEEecchh
Confidence 4677888877777777777777776555443344
No 320
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=38.52 E-value=2.8e+02 Score=25.05 Aligned_cols=60 Identities=12% Similarity=-0.071 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhc
Q 014698 221 KAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLIAT 287 (420)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~ 287 (420)
|+++.......+.+.++.+....- ..... ++.....+ .....-+.++++.+.+.+++|.|
T Consensus 29 knv~i~s~~fl~~f~a~~gl~nlq-~~vn~--~lg~~sl~----~~y~~l~~s~m~~~~~Ir~~g~K 88 (390)
T KOG3097|consen 29 KNVLILSIAFLLTFTAYLGLQNLQ-TSVNY--DLGTVSLG----ALYLSLIDSSMFMPLLIRFLGTK 88 (390)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHH-HHHhc--Ccccchhh----hhhHHHHHHHHHHHHHHHHHhhH
Confidence 455566555555555555544322 11111 22222222 23344455666666888999843
No 321
>PF03616 Glt_symporter: Sodium/glutamate symporter; InterPro: IPR004445 This is a family of sodium/glutamate symporters (glutamate permeases), which catalyse the sodium-dependent uptake of extracellular glutamate. The protein is located in the inner membrane.; GO: 0015501 glutamate:sodium symporter activity, 0015813 L-glutamate transport, 0016021 integral to membrane
Probab=38.41 E-value=3.2e+02 Score=25.09 Aligned_cols=25 Identities=12% Similarity=0.141 Sum_probs=15.9
Q ss_pred HHHHHHHHHhhhhhhhhhhhcCcch
Q 014698 267 PLASVLVTSIAAQFADNLIATGVET 291 (420)
Q Consensus 267 ~~~~~~~~~~~g~l~dr~~~~~~~~ 291 (420)
.+.++++..+.-.+.||.+..+.+.
T Consensus 250 f~~ami~g~ivrn~~~~~~~~~id~ 274 (368)
T PF03616_consen 250 FVGAMIVGIIVRNILDKTGKYKIDR 274 (368)
T ss_pred HHHHHHHHHHHHHHHHHhCcccCCH
Confidence 3445566666777788877665543
No 322
>PRK10621 hypothetical protein; Provisional
Probab=38.35 E-value=2.6e+02 Score=24.11 Aligned_cols=29 Identities=7% Similarity=0.007 Sum_probs=15.3
Q ss_pred hhhHHHHHHhhHHHhhhccchhHHHHHHH
Q 014698 133 LSFGSVAGLLLAPPIIENLGWESVFYIFG 161 (420)
Q Consensus 133 ~~~g~~~g~~l~~~l~~~~gwr~~f~~~~ 161 (420)
..++.+.|.+++.++.++.+-+..-.+.+
T Consensus 83 l~~~~l~Ga~~G~~l~~~l~~~~l~~~~~ 111 (266)
T PRK10621 83 NIAMTFVGSMSGALLVQYVQADILRQILP 111 (266)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 34456666666666666554443333333
No 323
>PRK15015 carbon starvation protein A; Provisional
Probab=38.13 E-value=4.2e+02 Score=26.44 Aligned_cols=57 Identities=14% Similarity=0.248 Sum_probs=29.1
Q ss_pred HHHHHHHhccccchhhhHHH-HHhcCCccccchhhHHHH-hhhhhHHHHHHhhHHHhhhccchh
Q 014698 93 LSRVLVGIGEGVSPSAATDL-IARSIPLEERSRAVSFVF-GGLSFGSVAGLLLAPPIIENLGWE 154 (420)
Q Consensus 93 ~~r~l~G~~~~~~~~~~~~~-i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~l~~~l~~~~gwr 154 (420)
+.+=+.+.=-.-..|+..-. =.|+.|.+ |-..+|-.. +....|.++||.++. .+||-
T Consensus 56 ia~kv~~lD~~r~TPA~~~~DG~DYvPt~-k~VLfGHHFasIAGAGPivGPvlAa----~~Gwl 114 (701)
T PRK15015 56 IAKNVLAVDPTRMTPAVRHNDGLDYVPTD-KKVLFGHHFAAIAGAGPLVGPVLAA----QMGYL 114 (701)
T ss_pred HHHHhccCCCCCCCCceECCCCCCcCcCC-ccchhHHHHHHHhccCccHHHHHHH----HHcch
Confidence 44444455433344432111 23566644 456666543 445566777776664 46885
No 324
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=37.29 E-value=2.1e+02 Score=28.90 Aligned_cols=56 Identities=21% Similarity=-0.082 Sum_probs=36.7
Q ss_pred HhHHhhhhcch-hhh--cchhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhcc
Q 014698 47 TNLLELLRLPL-LFV--TWIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGE 102 (420)
Q Consensus 47 ~~~~~l~~~p~-~~~--~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 102 (420)
...|.+.+++- .|+ ++|.|-++++..+++++++...+..+..+.+...-++.+++.
T Consensus 37 l~lG~ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~~~p~~~~~~l~~~tf~~ 95 (701)
T TIGR01667 37 LCLGIIAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLFPKPWLFPFLLTLLTFGF 95 (701)
T ss_pred HHHhhHhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 33444444444 222 236778889999999999888775666666666666666653
No 325
>PF01914 MarC: MarC family integral membrane protein; InterPro: IPR002771 Members of this family are integral membrane proteins that includes the antibiotic resistance protein MarC. These proteins may be transporters. ; GO: 0016021 integral to membrane
Probab=34.97 E-value=2.6e+02 Score=23.05 Aligned_cols=55 Identities=15% Similarity=0.064 Sum_probs=30.5
Q ss_pred HHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchh-HHHHHHHHHHHH
Q 014698 112 LIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWE-SVFYIFGLLGIA 166 (420)
Q Consensus 112 ~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr-~~f~~~~~~~~~ 166 (420)
-+.+-.++++|.+..-.......+-..+....|..+.+.+|-. ..|-+.|.+.+.
T Consensus 26 ~lt~~~~~~~r~~ia~~a~~~a~~ill~f~~~G~~iL~~fgIsl~af~IaGGiiL~ 81 (203)
T PF01914_consen 26 SLTKGMSPKERRRIARRASIIAFIILLIFAFFGQLILNFFGISLPAFRIAGGIILF 81 (203)
T ss_pred HHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 3445555566655555444444555555666777777777644 345555544333
No 326
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=34.45 E-value=2.7e+02 Score=28.18 Aligned_cols=55 Identities=16% Similarity=-0.031 Sum_probs=35.5
Q ss_pred hHHhhhhcch-hhhc--chhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhcc
Q 014698 48 NLLELLRLPL-LFVT--WIRKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGE 102 (420)
Q Consensus 48 ~~~~l~~~p~-~~~~--~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 102 (420)
..|.+.+++. .|+. +|.|-+.++.+++.++++...+..+..+.+...-++.+++.
T Consensus 38 ~LG~ia~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~ 95 (704)
T TIGR01666 38 ILGIIAAALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGF 95 (704)
T ss_pred HHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHH
Confidence 3444444444 3333 36677788888898888887765666677766666666653
No 327
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=34.36 E-value=1.1e+02 Score=29.69 Aligned_cols=34 Identities=15% Similarity=0.095 Sum_probs=28.0
Q ss_pred CCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhc
Q 014698 254 LNLTEAAWVSILPPLASVLVTSIAAQFADNLIAT 287 (420)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~ 287 (420)
.++..-|.+....-+..++.+.++|+.+.|+-+.
T Consensus 290 ~~~~~rg~l~t~~i~~y~~~~~iaGy~S~~~yk~ 323 (521)
T PF02990_consen 290 LSPNNRGSLLTAAIILYALTSFIAGYVSARLYKS 323 (521)
T ss_pred ccccCcchHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 5566667777888888999999999999998755
No 328
>PTZ00370 STEVOR; Provisional
Probab=33.32 E-value=48 Score=28.55 Aligned_cols=40 Identities=10% Similarity=0.069 Sum_probs=23.5
Q ss_pred HHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccC
Q 014698 138 VAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEG 177 (420)
Q Consensus 138 ~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~ 177 (420)
+.|+..+........|-.+-++..++.++.++++.|+.+.
T Consensus 242 lagtAAtaAsaaF~Pygiaalvllil~vvliilYiwlyrr 281 (296)
T PTZ00370 242 LAGTAASAASSAFYPYGIAALVLLILAVVLIILYIWLYRR 281 (296)
T ss_pred ccchHHHHHHHhhcccHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3444444444444566666666667777766666666544
No 329
>PRK10263 DNA translocase FtsK; Provisional
Probab=31.11 E-value=5.7e+02 Score=28.07 Aligned_cols=21 Identities=10% Similarity=-0.096 Sum_probs=13.0
Q ss_pred hhHHHHHHHHHhhhhhhhhhh
Q 014698 265 LPPLASVLVTSIAAQFADNLI 285 (420)
Q Consensus 265 ~~~~~~~~~~~~~g~l~dr~~ 285 (420)
+...++.+|..+...+..-+|
T Consensus 60 V~Nl~GiVGA~LAD~L~~LFG 80 (1355)
T PRK10263 60 IHNLGGMPGAWLADTLFFIFG 80 (1355)
T ss_pred cccccchHHHHHHHHHHHHHh
Confidence 345566667766666666665
No 330
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=31.00 E-value=94 Score=22.32 Aligned_cols=31 Identities=6% Similarity=-0.070 Sum_probs=26.9
Q ss_pred chhhHHHHhhHHHHHHHHHhhhhhhhhhhhc
Q 014698 257 TEAAWVSILPPLASVLVTSIAAQFADNLIAT 287 (420)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~ 287 (420)
...|-.+..++-..++.+++.++..|+..+.
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd 84 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPD 84 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCC
Confidence 5577888999999999999999999998765
No 331
>PF01810 LysE: LysE type translocator; InterPro: IPR001123 Lysine exporter protein is involved in the efflux of excess L-lysine as a control for intracellular levels of L-lysine. A number of proteins belong to this family. These include the chemotactic transduction protein from Pseudomonas aeruginosa, the threonine efflux protein and a number of uncharacterised proteins from a variety of sources.; GO: 0006865 amino acid transport, 0016020 membrane
Probab=30.88 E-value=2.8e+02 Score=22.24 Aligned_cols=18 Identities=22% Similarity=0.156 Sum_probs=7.4
Q ss_pred HHHHHHHhhhhhhhhhhh
Q 014698 269 ASVLVTSIAAQFADNLIA 286 (420)
Q Consensus 269 ~~~~~~~~~g~l~dr~~~ 286 (420)
+....-.......+|.++
T Consensus 145 ~~~~w~~~~~~~~~~~~~ 162 (191)
T PF01810_consen 145 GSLLWFLLLALLGSRLRR 162 (191)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 333333334444444443
No 332
>COG0814 SdaC Amino acid permeases [Amino acid transport and metabolism]
Probab=29.46 E-value=4.8e+02 Score=24.43 Aligned_cols=26 Identities=4% Similarity=-0.100 Sum_probs=15.9
Q ss_pred ccccchhhHHHHhhhhhHHHHHHhhH
Q 014698 119 LEERSRAVSFVFGGLSFGSVAGLLLA 144 (420)
Q Consensus 119 ~~~r~~~~~~~~~~~~~g~~~g~~l~ 144 (420)
++.++..+.+..+..+.|...-|...
T Consensus 9 ~s~~~~vl~l~gT~IGAGvL~lP~a~ 34 (415)
T COG0814 9 SSDLGGVLILAGTAIGAGVLFLPVAF 34 (415)
T ss_pred cchHHHHHHHHccccccchhhhhHHh
Confidence 34566666666666666666666544
No 333
>COG1457 CodB Purine-cytosine permease and related proteins [Nucleotide transport and metabolism]
Probab=28.71 E-value=5.1e+02 Score=24.51 Aligned_cols=67 Identities=13% Similarity=-0.113 Sum_probs=36.8
Q ss_pred hhhcHHHHHHHHHHHHhHHHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhh
Q 014698 217 IFRSKAVWAMIYAHFCGSWGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADNLI 285 (420)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~ 285 (420)
.+..+.-+...+.......+.++.+.++.-.... ..+.........+.++...+..+++-+..+++.
T Consensus 90 ~fG~~Gs~l~sll~~~~~iGW~~v~~~l~~~a~~--~~~~~~~~~~ili~g~l~~l~~ifG~r~l~~l~ 156 (442)
T COG1457 90 PFGVKGSILPSLLNGITLIGWFGVNVILSGIAIG--SGTGLPVWAGILIIGVLMTLVTIFGYRALHKLE 156 (442)
T ss_pred cccchhHHHHHHHHHHHHhhHHHHHHHHhccccc--cCCCCcHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 3434444555555555666676766655444321 113333444445556666666777777777765
No 334
>TIGR01478 STEVOR variant surface antigen, stevor family. This model represents the stevor branch of the rifin/stevor family (pfam02009) of predicted variant surface antigens as found in Plasmodium falciparum. This model is based on a set of stevor sequences kindly provided by Matt Berriman from the Sanger Center. This is a global model and assesses a penalty for incomplete sequence. Additional fragmentary sequences may be found with the fragment model and a cutoff of 8 bits.
Probab=28.63 E-value=32 Score=29.51 Aligned_cols=21 Identities=5% Similarity=0.218 Sum_probs=12.0
Q ss_pred HHHHHHhhhccCCCCCCCCCC
Q 014698 399 LTGTIVWLAFASSKPQNFSTR 419 (420)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~ 419 (420)
+..++++.++.++|++.|+.+
T Consensus 273 vvliiLYiWlyrrRK~swkhe 293 (295)
T TIGR01478 273 VVLIILYIWLYRRRKKSWKHE 293 (295)
T ss_pred HHHHHHHHHHHHhhccccccc
Confidence 334445555566667777544
No 335
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=28.38 E-value=2.2e+02 Score=20.28 Aligned_cols=34 Identities=12% Similarity=0.241 Sum_probs=17.1
Q ss_pred HhhhhhHHHHHHhhHHHhhhccc----hhHHHHHHHHH
Q 014698 130 FGGLSFGSVAGLLLAPPIIENLG----WESVFYIFGLL 163 (420)
Q Consensus 130 ~~~~~~g~~~g~~l~~~l~~~~g----wr~~f~~~~~~ 163 (420)
.....+..++|..+|-++-+.++ |-.+|.+.|+.
T Consensus 49 G~~~v~pil~G~~lG~WLD~~~~t~~~~tl~~lllGv~ 86 (100)
T TIGR02230 49 GWSVAIPTLLGVAVGIWLDRHYPSPFSWTLTMLIVGVV 86 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHH
Confidence 33334445556666666666665 44444444433
No 336
>KOG1278 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=28.23 E-value=3.2e+02 Score=26.45 Aligned_cols=32 Identities=16% Similarity=0.077 Sum_probs=20.2
Q ss_pred CCcchhhHHHHhhHHHHHHHHHhhhhhhhhhh
Q 014698 254 LNLTEAAWVSILPPLASVLVTSIAAQFADNLI 285 (420)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~ 285 (420)
+++..-|-+++..-+.-++..+++|+.+.|+-
T Consensus 356 lSPs~RGsLmT~~~~l~v~~G~~agY~s~rly 387 (628)
T KOG1278|consen 356 LSPSSRGSLMTAMVLLFVFMGFVAGYVSARLY 387 (628)
T ss_pred CCccccccHHHHHHHHHHHHHHhhhhhhhhhH
Confidence 46666666666666666666666676666654
No 337
>PF11368 DUF3169: Protein of unknown function (DUF3169); InterPro: IPR021509 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently there is no known function.
Probab=28.20 E-value=3.8e+02 Score=22.87 Aligned_cols=25 Identities=16% Similarity=0.215 Sum_probs=13.1
Q ss_pred chhhHHHHhhhhhHHHHHHhhHHHh
Q 014698 123 SRAVSFVFGGLSFGSVAGLLLAPPI 147 (420)
Q Consensus 123 ~~~~~~~~~~~~~g~~~g~~l~~~l 147 (420)
.+.....-.+.-+|.++|...+..-
T Consensus 9 ~~~~~~illg~~iGg~~G~~~~~~~ 33 (248)
T PF11368_consen 9 LRFLLLILLGGLIGGFIGFFIGRIG 33 (248)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555555556666665544333
No 338
>PF03741 TerC: Integral membrane protein TerC family; InterPro: IPR005496 A family containining a number of integral membrane proteins is named after TerC protein. TerC has been implicated in resistance to tellurium, and may be involved in efflux of tellurium ions. The tellurite-resistant Escherichia coli strain KL53 was found during testing of a group of clinical isolates for antibiotic and heavy metal ion resistance []. The determinant of the strain's tellurite resistance was located on a large conjugative plasmid, and analyses showed the genes terB, terC, terD and terE were essential for conservation of this resistance. Members of this family contain a number of conserved aspartates which may be involved in metal ion binding.; GO: 0016021 integral to membrane
Probab=27.16 E-value=3.4e+02 Score=21.94 Aligned_cols=58 Identities=21% Similarity=0.294 Sum_probs=32.2
Q ss_pred cchhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHH
Q 014698 104 VSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLL 163 (420)
Q Consensus 104 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~ 163 (420)
.-.....+++.+..|+++|.++.-+--.+..+--.+.-..+.++.+. |++..++.|+.
T Consensus 12 ~DN~~vi~~~~~~lp~~~r~kal~~Gi~~A~~lR~~~i~~~~~ll~~--~~~i~~igG~~ 69 (183)
T PF03741_consen 12 IDNAFVIAMIFRKLPPEQRRKALFWGIIGAIVLRIIFIFLASWLLSI--FPWILLIGGLF 69 (183)
T ss_pred hhHHHHHHHHHhCCCHHHhhhhHHHhHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHH
Confidence 34455677788889988777766543333333334444455666665 34444444433
No 339
>PRK02237 hypothetical protein; Provisional
Probab=26.06 E-value=1.7e+02 Score=21.13 Aligned_cols=31 Identities=10% Similarity=-0.165 Sum_probs=26.7
Q ss_pred chhhHHHHhhHHHHHHHHHhhhhhhhhhhhc
Q 014698 257 TEAAWVSILPPLASVLVTSIAAQFADNLIAT 287 (420)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~ 287 (420)
...|-.+..++-..++.+++.++..|+..+.
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd 86 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPD 86 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCC
Confidence 3478888999999999999999999998765
No 340
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=25.79 E-value=31 Score=25.96 Aligned_cols=14 Identities=14% Similarity=0.251 Sum_probs=7.0
Q ss_pred hHHHHHHHHHHHHH
Q 014698 154 ESVFYIFGLLGIAW 167 (420)
Q Consensus 154 r~~f~~~~~~~~~~ 167 (420)
||++++..++++++
T Consensus 1 RW~l~~iii~~i~l 14 (130)
T PF12273_consen 1 RWVLFAIIIVAILL 14 (130)
T ss_pred CeeeHHHHHHHHHH
Confidence 45555554444443
No 341
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=24.98 E-value=2.1e+02 Score=24.06 Aligned_cols=55 Identities=25% Similarity=0.344 Sum_probs=40.8
Q ss_pred HHHHHHHHhccccchhhhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHh
Q 014698 92 VLSRVLVGIGEGVSPSAATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPI 147 (420)
Q Consensus 92 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l 147 (420)
...-.-.|+|.+..+.++..-+.+.+| +......++..+.+.+..+.|-...-++
T Consensus 175 ~ALAMasGvGSgSMMaAa~~aL~~~~P-~~a~~i~A~AaaSNllt~~~G~Y~~ifi 229 (241)
T PF11299_consen 175 YALAMASGVGSGSMMAAASGALAAAYP-EMADQILAFAAASNLLTSVTGLYMSIFI 229 (241)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHCc-chHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345556799999999999999999997 5666777777777777777666555443
No 342
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=24.92 E-value=1.3e+02 Score=27.36 Aligned_cols=84 Identities=14% Similarity=-0.084 Sum_probs=54.2
Q ss_pred hHHhhhhcchhhhcch--hHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHhccccchhhhHHHHHhcCCccccchh
Q 014698 48 NLLELLRLPLLFVTWI--RKVLQTGVLIWSLATALLPLLAGFMPGLVLSRVLVGIGEGVSPSAATDLIARSIPLEERSRA 125 (420)
Q Consensus 48 ~~~~l~~~p~~~~~~~--r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 125 (420)
++.++..+.+-.++.| +-.+..+...-+...+.++. +++.|...++-++.+.--....+.+..-+++..+++.-|..
T Consensus 285 a~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~-t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~gLv 363 (433)
T KOG3810|consen 285 AIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQ-TQHIWVCYAGYVLFRVIYQLTITIATFQIARNLSSELFGLV 363 (433)
T ss_pred HHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhc-ccceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhheee
Confidence 3445555555333333 33444454444444455554 78888887777777776677778888888888888888888
Q ss_pred hHHHHhh
Q 014698 126 VSFVFGG 132 (420)
Q Consensus 126 ~~~~~~~ 132 (420)
+|+....
T Consensus 364 FGiNTFv 370 (433)
T KOG3810|consen 364 FGINTFV 370 (433)
T ss_pred eehHHHH
Confidence 8876543
No 343
>PRK15049 L-asparagine permease; Provisional
Probab=24.75 E-value=6.3e+02 Score=24.30 Aligned_cols=20 Identities=15% Similarity=0.262 Sum_probs=10.1
Q ss_pred chhHHHHHHHHHHHHHHHHh
Q 014698 152 GWESVFYIFGLLGIAWFSGF 171 (420)
Q Consensus 152 gwr~~f~~~~~~~~~~~~~~ 171 (420)
+.|+.........++..+.+
T Consensus 446 ~~~~~~~~~~~~~~~~~~~~ 465 (499)
T PRK15049 446 NGTYTIAALPIIGILLVIGW 465 (499)
T ss_pred chHHHHHHHHHHHHHHHHHH
Confidence 35666665554444444433
No 344
>KOG1277 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=22.94 E-value=2.2e+02 Score=26.75 Aligned_cols=26 Identities=15% Similarity=0.098 Sum_probs=11.9
Q ss_pred HHHhhHHHHHHHHHhhhh----hhhhhhhc
Q 014698 262 VSILPPLASVLVTSIAAQ----FADNLIAT 287 (420)
Q Consensus 262 ~~~~~~~~~~~~~~~~g~----l~dr~~~~ 287 (420)
+.+...+..++.+++.|+ +-.|.|.|
T Consensus 328 l~saaI~vYAlTs~i~GY~~gs~Y~r~gG~ 357 (593)
T KOG1277|consen 328 LLSAAIVVYALTSPINGYVSGSFYARLGGR 357 (593)
T ss_pred HHHHHHHHHHhcccccccccceeeehhccH
Confidence 333333444444444444 44555544
No 345
>PTZ00370 STEVOR; Provisional
Probab=22.73 E-value=31 Score=29.63 Aligned_cols=34 Identities=6% Similarity=0.188 Sum_probs=15.5
Q ss_pred CceeeeehhhhHHHHHHHHHHhhhccCCCCCCCCC
Q 014698 384 HSWSMSLFAPSIFFYLTGTIVWLAFASSKPQNFST 418 (420)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (420)
.++..+-++..+ ..+..++++.++.++|++.|..
T Consensus 255 ~Pygiaalvlli-l~vvliilYiwlyrrRK~swkh 288 (296)
T PTZ00370 255 YPYGIAALVLLI-LAVVLIILYIWLYRRRKNSWKH 288 (296)
T ss_pred cccHHHHHHHHH-HHHHHHHHHHHHHHhhcchhHH
Confidence 344433333323 2333344455555566666643
No 346
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=22.34 E-value=1.7e+02 Score=24.57 Aligned_cols=45 Identities=16% Similarity=0.273 Sum_probs=23.6
Q ss_pred HHHHhhhhhhhhhhhhhhccCccchHHHHHHHHHhhhhhHHHHHHH
Q 014698 330 AGLALSSFALSGLYCTHQDISPEYASILLGITNTVGAVPGIVGVAL 375 (420)
Q Consensus 330 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~ 375 (420)
.|.+.+...........+.+ |+...+..++....+-+.+..|-+.
T Consensus 181 sGvGSgSMMaAa~~aL~~~~-P~~a~~i~A~AaaSNllt~~~G~Y~ 225 (241)
T PF11299_consen 181 SGVGSGSMMAAASGALAAAY-PEMADQILAFAAASNLLTSVTGLYM 225 (241)
T ss_pred cCCcHHHHHHHHHHHHHHHC-cchHHHHHHHHHHHHHHHHHHHHHH
Confidence 35555555555555555555 4566666666555444444444443
No 347
>PRK10263 DNA translocase FtsK; Provisional
Probab=22.32 E-value=1.1e+03 Score=26.15 Aligned_cols=20 Identities=10% Similarity=0.117 Sum_probs=14.4
Q ss_pred HHHHHHHHHhhhhhhhhhhh
Q 014698 267 PLASVLVTSIAAQFADNLIA 286 (420)
Q Consensus 267 ~~~~~~~~~~~g~l~dr~~~ 286 (420)
..++++|..+...+...+|.
T Consensus 141 ~gGGIIG~lLs~lL~~LfG~ 160 (1355)
T PRK10263 141 ASGGVIGSLLSTTLQPLLHS 160 (1355)
T ss_pred cccchHHHHHHHHHHHHHhH
Confidence 45777888887777777763
No 348
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=22.31 E-value=5.1e+02 Score=22.32 Aligned_cols=24 Identities=17% Similarity=0.090 Sum_probs=11.7
Q ss_pred hHHHHHHHHHhhhhhHHHHHHHHH
Q 014698 354 ASILLGITNTVGAVPGIVGVALTG 377 (420)
Q Consensus 354 ~g~~~g~~~~~~~~g~~~~~~~~g 377 (420)
+..+.|+-..+.+....+..+..|
T Consensus 77 ~~iGLglg~liW~s~n~l~Gw~~g 100 (254)
T PF07857_consen 77 KTIGLGLGMLIWGSVNCLTGWASG 100 (254)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHh
Confidence 334444444555555555555544
No 349
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=22.03 E-value=1.1e+03 Score=25.94 Aligned_cols=49 Identities=8% Similarity=0.108 Sum_probs=26.2
Q ss_pred HHHHHHhhhhhhHhhhhhCCCcchhhHHHHhhHHHHHHHHHhhhhhhhh
Q 014698 235 WGHYTCLSWLPTYFSEELSLNLTEAAWVSILPPLASVLVTSIAAQFADN 283 (420)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr 283 (420)
+..++...|...++...-.+++.+.-..+.....+.....-...+.-|-
T Consensus 903 ~~~~A~~f~~G~~Li~~g~~~~~~~~~vf~~l~~ta~~~~~~~s~~Pd~ 951 (1228)
T KOG0055|consen 903 FFVYALSFWYGARLISNGEMTFEDVFRVFMALSFTAMALGQASSYAPDI 951 (1228)
T ss_pred HHHHHHHHHHhHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHhhCcHH
Confidence 3344556677777776656666665544444444444333344444454
No 350
>PF13940 Ldr_toxin: Toxin Ldr, type I toxin-antitoxin system
Probab=22.01 E-value=1.3e+02 Score=16.21 Aligned_cols=20 Identities=15% Similarity=0.331 Sum_probs=12.4
Q ss_pred HhhHHHHHHHHHhhhhhhhh
Q 014698 264 ILPPLASVLVTSIAAQFADN 283 (420)
Q Consensus 264 ~~~~~~~~~~~~~~g~l~dr 283 (420)
....+++++.+++.+|+-+|
T Consensus 15 AAP~iagIi~s~iv~w~~~R 34 (35)
T PF13940_consen 15 AAPIIAGIIASLIVGWLRNR 34 (35)
T ss_pred HhHHHHHHHHHHHHHHHHhc
Confidence 34456667777777776554
No 351
>TIGR00814 stp serine transporter. The HAAAP family includes well characterized aromatic amino acid:H+ symport permeases and hydroxy amino acid permeases. This subfamily is specific for hydroxy amino acid transporters and includes the serine permease, SdaC, of E. coli, and the threonine permease, TdcC, of E. coli.
Probab=22.01 E-value=6.5e+02 Score=23.41 Aligned_cols=26 Identities=4% Similarity=-0.045 Sum_probs=20.0
Q ss_pred CccccchhhHHHHhhhhhHHHHHHhh
Q 014698 118 PLEERSRAVSFVFGGLSFGSVAGLLL 143 (420)
Q Consensus 118 ~~~~r~~~~~~~~~~~~~g~~~g~~l 143 (420)
.+++.+....+.....+.|...-|..
T Consensus 2 ~~~d~~w~~~l~gt~IGaGiL~LP~~ 27 (397)
T TIGR00814 2 TKTDTGWMLGLYGTAIGAGVLFLPIQ 27 (397)
T ss_pred CccchhHHHHHHHHHHHHHHHHHHHH
Confidence 45667788888888888888887865
No 352
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=21.97 E-value=61 Score=24.07 Aligned_cols=11 Identities=18% Similarity=0.042 Sum_probs=3.7
Q ss_pred HHhhhccCCCC
Q 014698 403 IVWLAFASSKP 413 (420)
Q Consensus 403 ~~~~~~~~~~~ 413 (420)
+.|+.+|++|+
T Consensus 84 i~y~irR~~Kk 94 (122)
T PF01102_consen 84 ISYCIRRLRKK 94 (122)
T ss_dssp HHHHHHHHS--
T ss_pred HHHHHHHHhcc
Confidence 33444444433
No 353
>COG1983 PspC Putative stress-responsive transcriptional regulator [Transcription / Signal transduction mechanisms]
Probab=21.56 E-value=2.5e+02 Score=18.48 Aligned_cols=33 Identities=24% Similarity=0.383 Sum_probs=16.8
Q ss_pred hhhccch-----hHHHHHHHHHH------HHH-HHHhhhcccCcc
Q 014698 147 IIENLGW-----ESVFYIFGLLG------IAW-FSGFKILQEGET 179 (420)
Q Consensus 147 l~~~~gw-----r~~f~~~~~~~------~~~-~~~~~~~~~~~~ 179 (420)
+.+.+|| |..+.+...+. +++ ++.++.+|+++.
T Consensus 21 la~yf~id~tlVRll~vl~~~~~~~~~~~ii~Yiia~~imP~~~~ 65 (70)
T COG1983 21 LAEYFGIDPTLVRLLFVLLTLFGGLTGFGIIAYIIAALIMPSEED 65 (70)
T ss_pred HHHHhCCChHHHHHHHHHHHHHhcchhHHHHHHHHHHHHCCCCcc
Confidence 5666675 44444444443 333 355556666544
No 354
>PRK10995 inner membrane protein; Provisional
Probab=20.96 E-value=5e+02 Score=21.71 Aligned_cols=58 Identities=7% Similarity=-0.121 Sum_probs=26.9
Q ss_pred hhhccCccchHHHHHHHHHhhhhhHHHHHHHHHHHhccCCceeeeehhhhHHHHHHHH
Q 014698 345 THQDISPEYASILLGITNTVGAVPGIVGVALTGYLLDSTHSWSMSLFAPSIFFYLTGT 402 (420)
Q Consensus 345 ~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~ 402 (420)
..+..++++|-+..--.......-..+....+..+.+..|-....+-+.+++.+....
T Consensus 31 lt~~~~~~~r~~ia~~~~~~a~~ill~f~~~G~~il~~fgIs~~a~rIaGGilL~~ig 88 (221)
T PRK10995 31 LSGNMTPEERNRQALMASVYVFAIMMVAFYAGQLVMSTFGISIPGLRIAGGLIVAFIG 88 (221)
T ss_pred HhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 3445555444332222222223333444555555666554444566666655444333
No 355
>PRK11111 hypothetical protein; Provisional
Probab=20.81 E-value=4.8e+02 Score=21.77 Aligned_cols=89 Identities=8% Similarity=-0.041 Sum_probs=0.0
Q ss_pred hhHHHHHhcCCccccchhhHHHHhhhhhHHHHHHhhHHHhhhccchhHHHHHHHHHHHHHHHHhhhcccCcccCCCCcCc
Q 014698 108 AATDLIARSIPLEERSRAVSFVFGGLSFGSVAGLLLAPPIIENLGWESVFYIFGLLGIAWFSGFKILQEGETSNGATLAP 187 (420)
Q Consensus 108 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (420)
....-+.+-.++++|.+..-.......+-..+....|.++.+.+|-...-.-.+.-.++..+.+-.+..++++.++++++
T Consensus 28 piflslt~~~s~~~r~~ia~~a~l~a~~ill~f~~~G~~iL~~fGIsl~afrIaGGiiL~~ial~Ml~g~~~~~~~~~~~ 107 (214)
T PRK11111 28 PVFISMTSHQTAAERNKTNLTANLSVAIILLISLFLGDFILNLFGISIDSFRIAGGILVVTIAMSMISGKLGEDKQNKQE 107 (214)
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCcccccccc
Q ss_pred cchhhhhhh
Q 014698 188 RSNYINMKK 196 (420)
Q Consensus 188 ~~~~~~~~~ 196 (420)
.++....++
T Consensus 108 ~~~~~~~~~ 116 (214)
T PRK11111 108 KSETAVRES 116 (214)
T ss_pred ccccccccc
No 356
>PF13386 DsbD_2: Cytochrome C biogenesis protein transmembrane region
Probab=20.67 E-value=4.7e+02 Score=21.28 Aligned_cols=35 Identities=17% Similarity=0.042 Sum_probs=27.7
Q ss_pred CCCcchhhHHHHhhHHHHHHHHHhhhhhhhhhhhc
Q 014698 253 SLNLTEAAWVSILPPLASVLVTSIAAQFADNLIAT 287 (420)
Q Consensus 253 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~ 287 (420)
.-|+.+.......++++..+.....+...++.+++
T Consensus 146 s~s~~~G~l~m~~FgLGT~p~ll~~~~~~~~l~~~ 180 (199)
T PF13386_consen 146 SGSPLYGALLMLAFGLGTLPALLLAGLLAGKLSRR 180 (199)
T ss_pred cCChHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 44677778888899999988888888888887654
No 357
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=20.32 E-value=4.3e+02 Score=20.66 Aligned_cols=27 Identities=7% Similarity=-0.112 Sum_probs=13.6
Q ss_pred HHHHhhHHHHHHHHHhhhhhhhhhhhc
Q 014698 261 WVSILPPLASVLVTSIAAQFADNLIAT 287 (420)
Q Consensus 261 ~~~~~~~~~~~~~~~~~g~l~dr~~~~ 287 (420)
++.+...++.-+..+--|.++..+...
T Consensus 100 ~~~S~~~Fg~gllGisYGilSaSWD~~ 126 (153)
T PF11947_consen 100 LLVSLVFFGLGLLGISYGILSASWDPE 126 (153)
T ss_pred HHHHHHHHHHHHHhhhhhhcccccCCC
Confidence 333444444444445566677666543
Done!