Query 014700
Match_columns 420
No_of_seqs 313 out of 2803
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 16:15:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014700.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014700hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3k96_A Glycerol-3-phosphate de 100.0 1.2E-54 4.1E-59 437.0 31.0 289 127-420 29-317 (356)
2 4fgw_A Glycerol-3-phosphate de 100.0 2.3E-55 7.9E-60 444.7 23.7 290 126-420 33-350 (391)
3 1yj8_A Glycerol-3-phosphate de 100.0 2.1E-39 7.3E-44 327.5 28.2 289 127-420 21-332 (375)
4 1evy_A Glycerol-3-phosphate de 100.0 1.3E-38 4.3E-43 320.3 24.3 289 127-419 15-310 (366)
5 1z82_A Glycerol-3-phosphate de 100.0 7.5E-38 2.5E-42 311.4 27.8 278 127-419 14-291 (335)
6 1x0v_A GPD-C, GPDH-C, glycerol 100.0 1.4E-37 4.8E-42 310.7 28.0 288 127-419 8-313 (354)
7 1txg_A Glycerol-3-phosphate de 100.0 1.5E-33 5.3E-38 278.7 25.9 283 128-419 1-299 (335)
8 3hwr_A 2-dehydropantoate 2-red 99.9 7.9E-28 2.7E-32 237.9 14.3 229 122-362 14-247 (318)
9 3hn2_A 2-dehydropantoate 2-red 99.9 1.7E-27 5.9E-32 234.6 13.6 250 127-396 2-268 (312)
10 3i83_A 2-dehydropantoate 2-red 99.9 2.2E-26 7.7E-31 227.4 17.6 220 127-362 2-237 (320)
11 3ghy_A Ketopantoate reductase 99.9 2.4E-26 8.3E-31 228.6 13.8 229 127-363 3-257 (335)
12 2ew2_A 2-dehydropantoate 2-red 99.9 1.5E-25 5E-30 218.7 15.4 256 127-396 3-275 (316)
13 4a7p_A UDP-glucose dehydrogena 99.9 8.2E-25 2.8E-29 225.6 20.5 223 127-372 8-255 (446)
14 3gg2_A Sugar dehydrogenase, UD 99.9 4.7E-24 1.6E-28 220.5 22.1 224 128-372 3-251 (450)
15 2y0c_A BCEC, UDP-glucose dehyd 99.9 1.1E-23 3.8E-28 219.2 19.9 242 126-394 7-277 (478)
16 2qyt_A 2-dehydropantoate 2-red 99.9 2.5E-24 8.6E-29 210.7 14.2 224 127-362 8-249 (317)
17 3obb_A Probable 3-hydroxyisobu 99.9 2.6E-23 8.8E-28 204.2 20.6 225 127-391 3-243 (300)
18 2zyd_A 6-phosphogluconate dehy 99.9 4.3E-23 1.5E-27 214.9 16.1 243 126-410 14-275 (480)
19 3g17_A Similar to 2-dehydropan 99.9 1.5E-23 5.2E-28 204.7 8.9 209 127-361 2-217 (294)
20 3doj_A AT3G25530, dehydrogenas 99.9 3.5E-22 1.2E-26 196.6 18.4 230 122-391 16-254 (310)
21 4gbj_A 6-phosphogluconate dehy 99.9 1.8E-22 6.2E-27 197.8 15.5 226 127-391 5-238 (297)
22 4dll_A 2-hydroxy-3-oxopropiona 99.9 1E-21 3.4E-26 194.2 20.5 226 125-391 29-262 (320)
23 3pdu_A 3-hydroxyisobutyrate de 99.9 4E-22 1.4E-26 193.7 16.2 203 127-369 1-207 (287)
24 3c7a_A Octopine dehydrogenase; 99.9 9.6E-23 3.3E-27 207.3 10.9 255 127-403 2-299 (404)
25 3qha_A Putative oxidoreductase 99.9 9.4E-22 3.2E-26 192.3 17.5 200 124-364 12-212 (296)
26 1vpd_A Tartronate semialdehyde 99.9 2.5E-21 8.6E-26 188.3 20.2 224 127-390 5-237 (299)
27 3g0o_A 3-hydroxyisobutyrate de 99.9 1.9E-21 6.6E-26 190.5 19.1 226 127-391 7-242 (303)
28 3g79_A NDP-N-acetyl-D-galactos 99.9 1.1E-21 3.6E-26 203.7 17.9 241 124-391 15-289 (478)
29 3pef_A 6-phosphogluconate dehy 99.9 3E-21 1E-25 187.5 18.9 224 128-391 2-234 (287)
30 2h78_A Hibadh, 3-hydroxyisobut 99.9 7.8E-21 2.7E-25 185.6 21.3 202 127-368 3-208 (302)
31 1mv8_A GMD, GDP-mannose 6-dehy 99.9 1.1E-20 3.8E-25 194.4 22.7 241 128-394 1-267 (436)
32 4ezb_A Uncharacterized conserv 99.9 1.1E-21 3.8E-26 193.8 13.4 221 127-391 24-256 (317)
33 1ks9_A KPA reductase;, 2-dehyd 99.9 1.6E-22 5.4E-27 195.2 6.5 235 128-377 1-238 (291)
34 3cky_A 2-hydroxymethyl glutara 99.9 2.1E-20 7.3E-25 182.0 21.5 227 125-391 2-238 (301)
35 4gwg_A 6-phosphogluconate dehy 99.9 3.5E-21 1.2E-25 200.1 15.5 249 126-417 3-272 (484)
36 2gf2_A Hibadh, 3-hydroxyisobut 99.9 2E-20 6.9E-25 181.7 19.3 224 128-391 1-240 (296)
37 3qsg_A NAD-binding phosphogluc 99.9 5.9E-21 2E-25 188.1 15.4 244 97-391 2-254 (312)
38 2iz1_A 6-phosphogluconate dehy 99.9 7.6E-21 2.6E-25 197.7 16.8 227 127-391 5-254 (474)
39 2uyy_A N-PAC protein; long-cha 99.8 2.6E-20 8.8E-25 183.0 18.9 224 126-391 29-263 (316)
40 3ego_A Probable 2-dehydropanto 99.8 4.1E-21 1.4E-25 188.8 12.7 213 127-357 2-226 (307)
41 2cvz_A Dehydrogenase, 3-hydrox 99.8 3.9E-20 1.3E-24 178.8 19.2 219 127-390 1-228 (289)
42 2o3j_A UDP-glucose 6-dehydroge 99.8 2.5E-20 8.7E-25 194.1 18.6 227 127-372 9-266 (481)
43 2f1k_A Prephenate dehydrogenas 99.8 3.2E-20 1.1E-24 178.9 17.3 219 128-367 1-229 (279)
44 3ojo_A CAP5O; rossmann fold, c 99.8 7.3E-20 2.5E-24 187.7 19.5 221 125-371 9-253 (431)
45 2q3e_A UDP-glucose 6-dehydroge 99.8 4.4E-20 1.5E-24 191.6 16.4 228 124-371 2-259 (467)
46 1yb4_A Tartronic semialdehyde 99.8 8.7E-20 3E-24 177.0 16.1 222 126-390 2-234 (295)
47 3pid_A UDP-glucose 6-dehydroge 99.8 9.6E-20 3.3E-24 186.6 15.5 212 126-370 35-270 (432)
48 2pgd_A 6-phosphogluconate dehy 99.8 1.2E-19 4.2E-24 189.0 15.1 212 128-368 3-219 (482)
49 4e21_A 6-phosphogluconate dehy 99.8 4.2E-19 1.4E-23 178.3 18.1 206 121-367 16-268 (358)
50 1pgj_A 6PGDH, 6-PGDH, 6-phosph 99.8 1.2E-19 3.9E-24 189.0 13.6 207 128-368 2-220 (478)
51 1dlj_A UDP-glucose dehydrogena 99.8 1.5E-18 5E-23 176.9 20.1 213 128-372 1-243 (402)
52 2p4q_A 6-phosphogluconate dehy 99.8 6.5E-19 2.2E-23 184.0 16.0 205 127-368 10-226 (497)
53 1bg6_A N-(1-D-carboxylethyl)-L 99.8 1.5E-18 5.1E-23 172.5 16.8 226 125-367 2-258 (359)
54 2izz_A Pyrroline-5-carboxylate 99.8 9.8E-18 3.3E-22 165.7 21.1 166 123-310 18-189 (322)
55 3l6d_A Putative oxidoreductase 99.8 6.1E-18 2.1E-22 166.0 18.6 199 126-368 8-211 (306)
56 2raf_A Putative dinucleotide-b 99.8 2.4E-18 8.1E-23 160.0 14.5 171 125-337 17-202 (209)
57 1i36_A Conserved hypothetical 99.8 2.5E-18 8.7E-23 164.3 13.4 212 128-390 1-218 (264)
58 3dtt_A NADP oxidoreductase; st 99.8 4.3E-18 1.5E-22 161.8 14.3 179 127-321 19-226 (245)
59 3gt0_A Pyrroline-5-carboxylate 99.7 1.5E-16 5E-21 151.2 22.0 229 127-415 2-244 (247)
60 2g5c_A Prephenate dehydrogenas 99.7 3.2E-18 1.1E-22 165.2 10.3 177 127-320 1-185 (281)
61 3tri_A Pyrroline-5-carboxylate 99.7 2E-16 6.8E-21 153.5 22.7 153 127-305 3-161 (280)
62 3vtf_A UDP-glucose 6-dehydroge 99.7 1.1E-16 3.7E-21 164.3 21.4 220 126-369 20-264 (444)
63 4huj_A Uncharacterized protein 99.7 6.5E-17 2.2E-21 151.2 17.3 170 125-314 21-204 (220)
64 3d1l_A Putative NADP oxidoredu 99.7 8.7E-16 3E-20 146.9 20.5 195 127-368 10-210 (266)
65 1yqg_A Pyrroline-5-carboxylate 99.7 4.2E-16 1.4E-20 148.6 17.3 193 128-368 1-196 (263)
66 3b1f_A Putative prephenate deh 99.7 2.2E-16 7.5E-21 153.0 14.1 221 126-366 5-240 (290)
67 2dpo_A L-gulonate 3-dehydrogen 99.7 1.8E-15 6.1E-20 149.6 18.1 199 127-366 6-222 (319)
68 2rcy_A Pyrroline carboxylate r 99.7 3E-15 1E-19 142.6 18.9 151 127-308 4-157 (262)
69 3c24_A Putative oxidoreductase 99.7 2.4E-15 8.1E-20 145.7 18.0 197 127-368 11-228 (286)
70 2ahr_A Putative pyrroline carb 99.6 4.2E-14 1.4E-18 134.6 24.1 151 126-308 2-155 (259)
71 3ggo_A Prephenate dehydrogenas 99.6 6.5E-15 2.2E-19 145.2 17.4 171 127-316 33-213 (314)
72 4e12_A Diketoreductase; oxidor 99.6 2.8E-14 9.5E-19 138.3 18.5 200 125-366 2-220 (283)
73 1jay_A Coenzyme F420H2:NADP+ o 99.6 4.5E-14 1.5E-18 130.2 18.9 179 128-321 1-194 (212)
74 1f0y_A HCDH, L-3-hydroxyacyl-C 99.6 7E-14 2.4E-18 136.5 21.1 195 127-366 15-234 (302)
75 2pv7_A T-protein [includes: ch 99.6 4.4E-14 1.5E-18 137.9 17.6 204 127-367 21-230 (298)
76 2vns_A Metalloreductase steap3 99.6 3.9E-14 1.3E-18 131.9 16.2 165 126-311 27-197 (215)
77 3ktd_A Prephenate dehydrogenas 99.6 1E-14 3.4E-19 145.4 11.2 180 125-326 6-208 (341)
78 1zej_A HBD-9, 3-hydroxyacyl-CO 99.6 8.4E-14 2.9E-18 136.0 17.4 187 125-366 10-202 (293)
79 3k6j_A Protein F01G10.3, confi 99.6 2.9E-13 9.9E-18 139.6 22.1 164 126-311 53-234 (460)
80 3mog_A Probable 3-hydroxybutyr 99.5 2.3E-13 7.8E-18 141.6 14.9 169 126-311 4-188 (483)
81 2yjz_A Metalloreductase steap4 99.2 6.7E-15 2.3E-19 136.1 0.0 165 126-314 18-188 (201)
82 2wtb_A MFP2, fatty acid multif 99.4 1.7E-12 5.9E-17 141.2 18.5 168 126-310 311-494 (725)
83 1np3_A Ketol-acid reductoisome 99.4 2.4E-11 8.2E-16 120.7 21.6 175 127-327 16-211 (338)
84 1wdk_A Fatty oxidation complex 99.4 1.1E-11 3.9E-16 134.6 20.7 168 126-310 313-496 (715)
85 2i76_A Hypothetical protein; N 99.4 4.4E-13 1.5E-17 129.3 8.6 151 127-307 2-153 (276)
86 1zcj_A Peroxisomal bifunctiona 99.4 9.4E-12 3.2E-16 128.8 18.5 166 126-311 36-218 (463)
87 3fr7_A Putative ketol-acid red 99.3 5.2E-11 1.8E-15 122.4 16.4 161 122-304 49-232 (525)
88 3ado_A Lambda-crystallin; L-gu 99.2 4E-10 1.4E-14 111.1 19.2 170 127-311 6-192 (319)
89 3dfu_A Uncharacterized protein 99.1 2E-10 6.8E-15 108.2 9.9 134 126-314 5-139 (232)
90 2gcg_A Glyoxylate reductase/hy 99.1 9.1E-11 3.1E-15 116.2 7.4 135 91-250 126-262 (330)
91 2dbq_A Glyoxylate reductase; D 99.1 1.2E-10 4.1E-15 115.6 8.1 137 91-250 117-256 (334)
92 3gg9_A D-3-phosphoglycerate de 99.0 3.6E-10 1.2E-14 113.0 9.1 138 91-250 124-267 (352)
93 1hyh_A L-hicdh, L-2-hydroxyiso 99.0 7.4E-10 2.5E-14 108.5 11.1 104 127-238 1-127 (309)
94 1lld_A L-lactate dehydrogenase 99.0 6.4E-10 2.2E-14 108.8 10.5 103 127-239 7-130 (319)
95 4g2n_A D-isomer specific 2-hyd 99.0 2.7E-10 9.2E-15 113.5 7.7 133 91-249 144-278 (345)
96 4e5n_A Thermostable phosphite 99.0 2.1E-10 7.3E-15 113.6 6.9 134 90-249 116-251 (330)
97 3ba1_A HPPR, hydroxyphenylpyru 99.0 2.2E-10 7.5E-15 113.7 6.5 129 91-250 137-267 (333)
98 1gdh_A D-glycerate dehydrogena 99.0 5.1E-10 1.8E-14 110.4 8.2 135 91-250 117-254 (320)
99 2d0i_A Dehydrogenase; structur 99.0 2.6E-10 8.9E-15 113.1 6.0 123 91-240 114-242 (333)
100 3jtm_A Formate dehydrogenase, 99.0 4.7E-10 1.6E-14 112.1 7.6 134 91-249 136-271 (351)
101 2ewd_A Lactate dehydrogenase,; 99.0 1.1E-09 3.6E-14 107.8 9.2 106 124-237 1-125 (317)
102 3gvx_A Glycerate dehydrogenase 99.0 3.8E-10 1.3E-14 109.9 5.8 126 91-250 98-225 (290)
103 4dgs_A Dehydrogenase; structur 99.0 5.5E-10 1.9E-14 111.1 6.9 121 90-239 142-264 (340)
104 2g76_A 3-PGDH, D-3-phosphoglyc 98.9 1.8E-09 6.2E-14 107.2 9.5 131 91-250 139-271 (335)
105 1ygy_A PGDH, D-3-phosphoglycer 98.9 1.1E-09 3.6E-14 115.3 7.8 121 91-239 116-238 (529)
106 1wwk_A Phosphoglycerate dehydr 98.9 1.5E-09 5.1E-14 106.5 8.1 131 91-250 116-248 (307)
107 2nac_A NAD-dependent formate d 98.9 1.2E-09 4.2E-14 110.5 7.4 125 91-239 163-289 (393)
108 3pp8_A Glyoxylate/hydroxypyruv 98.9 2.6E-10 8.8E-15 112.4 2.1 128 91-249 115-244 (315)
109 3evt_A Phosphoglycerate dehydr 98.9 4.1E-10 1.4E-14 111.3 3.2 120 91-239 111-233 (324)
110 2j6i_A Formate dehydrogenase; 98.9 1.8E-09 6E-14 108.5 7.6 135 91-250 136-273 (364)
111 1pzg_A LDH, lactate dehydrogen 98.9 3.9E-09 1.3E-13 104.5 9.9 103 127-236 9-135 (331)
112 2w2k_A D-mandelate dehydrogena 98.9 1.2E-09 4.2E-14 108.9 6.1 125 91-237 130-260 (348)
113 2pi1_A D-lactate dehydrogenase 98.9 2.3E-09 8E-14 106.3 7.7 121 91-239 114-236 (334)
114 4hy3_A Phosphoglycerate oxidor 98.9 3.1E-09 1.1E-13 106.6 8.6 124 91-239 147-272 (365)
115 2ekl_A D-3-phosphoglycerate de 98.9 2E-09 6.7E-14 105.9 6.8 119 91-239 118-238 (313)
116 3zwc_A Peroxisomal bifunctiona 98.9 1.5E-07 5.2E-12 102.4 21.8 169 126-311 315-497 (742)
117 1mx3_A CTBP1, C-terminal bindi 98.9 2.1E-09 7E-14 107.3 6.7 137 91-250 135-275 (347)
118 1sc6_A PGDH, D-3-phosphoglycer 98.9 1.8E-09 6.3E-14 109.7 6.3 128 91-249 119-248 (404)
119 1j4a_A D-LDH, D-lactate dehydr 98.9 3.1E-09 1.1E-13 105.4 7.5 130 91-250 120-251 (333)
120 1a5z_A L-lactate dehydrogenase 98.8 9.1E-09 3.1E-13 101.3 10.8 101 128-238 1-121 (319)
121 3k5p_A D-3-phosphoglycerate de 98.8 2.3E-09 8E-14 109.0 6.6 128 91-249 130-259 (416)
122 1u8x_X Maltose-6'-phosphate gl 98.8 5.9E-09 2E-13 107.9 9.2 117 128-252 29-185 (472)
123 1guz_A Malate dehydrogenase; o 98.8 8.2E-09 2.8E-13 101.2 9.7 106 128-237 1-122 (310)
124 1qp8_A Formate dehydrogenase; 98.8 2.2E-09 7.7E-14 105.1 5.4 126 91-250 99-226 (303)
125 2hjr_A Malate dehydrogenase; m 98.8 7.7E-09 2.6E-13 102.3 8.7 102 127-236 14-134 (328)
126 2cuk_A Glycerate dehydrogenase 98.8 1.6E-09 5.4E-14 106.5 3.5 119 91-239 115-235 (311)
127 3hg7_A D-isomer specific 2-hyd 98.8 1.3E-09 4.4E-14 107.7 2.9 120 91-240 116-237 (324)
128 1obb_A Maltase, alpha-glucosid 98.8 1.4E-08 4.7E-13 105.3 10.1 79 127-209 3-87 (480)
129 2v6b_A L-LDH, L-lactate dehydr 98.8 2.1E-08 7.2E-13 98.0 10.8 102 128-237 1-120 (304)
130 1oju_A MDH, malate dehydrogena 98.8 5.2E-08 1.8E-12 94.9 13.2 115 128-253 1-133 (294)
131 2yq5_A D-isomer specific 2-hyd 98.8 6.3E-09 2.1E-13 103.6 6.5 130 91-250 120-252 (343)
132 1lss_A TRK system potassium up 98.8 4E-08 1.4E-12 83.2 10.6 98 127-237 4-106 (140)
133 1t2d_A LDH-P, L-lactate dehydr 98.7 1.9E-08 6.4E-13 99.3 9.1 106 125-236 2-129 (322)
134 1s6y_A 6-phospho-beta-glucosid 98.7 1.9E-08 6.5E-13 103.6 9.2 118 127-252 7-166 (450)
135 1dxy_A D-2-hydroxyisocaproate 98.7 1.3E-08 4.4E-13 100.9 5.8 120 91-239 118-239 (333)
136 1xdw_A NAD+-dependent (R)-2-hy 98.7 1.1E-08 3.7E-13 101.4 5.0 130 91-250 119-250 (331)
137 2i99_A MU-crystallin homolog; 98.7 3.5E-08 1.2E-12 96.8 8.5 92 126-233 134-226 (312)
138 3oj0_A Glutr, glutamyl-tRNA re 98.6 2.8E-08 9.7E-13 85.9 5.8 92 127-235 21-112 (144)
139 2hk9_A Shikimate dehydrogenase 98.6 4.6E-08 1.6E-12 94.2 6.9 93 127-234 129-222 (275)
140 3fef_A Putative glucosidase LP 98.6 2.8E-07 9.7E-12 94.7 12.8 115 127-252 5-160 (450)
141 2g1u_A Hypothetical protein TM 98.5 2.8E-07 9.7E-12 80.5 9.6 99 127-237 19-122 (155)
142 3kb6_A D-lactate dehydrogenase 98.5 8.4E-08 2.9E-12 95.1 6.4 122 91-240 114-237 (334)
143 3euw_A MYO-inositol dehydrogen 98.5 1.1E-06 3.6E-11 86.8 14.0 95 125-237 2-99 (344)
144 3c85_A Putative glutathione-re 98.5 4.3E-07 1.5E-11 81.3 10.1 96 127-235 39-141 (183)
145 3gvi_A Malate dehydrogenase; N 98.5 2.4E-07 8.2E-12 91.4 9.0 102 126-237 6-128 (324)
146 3l4b_C TRKA K+ channel protien 98.5 4.5E-07 1.5E-11 83.7 10.2 100 128-236 1-102 (218)
147 2rir_A Dipicolinate synthase, 98.5 4.4E-07 1.5E-11 88.2 10.7 92 127-235 157-248 (300)
148 1ur5_A Malate dehydrogenase; o 98.5 5.5E-07 1.9E-11 88.2 11.4 105 127-236 2-122 (309)
149 2o4c_A Erythronate-4-phosphate 98.5 1.1E-07 3.9E-12 95.7 6.3 92 127-239 116-213 (380)
150 3d4o_A Dipicolinate synthase s 98.5 5.1E-07 1.7E-11 87.5 10.5 92 127-235 155-246 (293)
151 3oet_A Erythronate-4-phosphate 98.5 9.2E-08 3.1E-12 96.3 5.3 93 127-240 119-217 (381)
152 3ic5_A Putative saccharopine d 98.5 4.5E-07 1.5E-11 74.3 8.2 96 127-233 5-100 (118)
153 1y6j_A L-lactate dehydrogenase 98.5 9.7E-07 3.3E-11 86.8 12.0 102 127-236 7-126 (318)
154 3llv_A Exopolyphosphatase-rela 98.4 1.2E-06 4.2E-11 74.8 10.8 95 127-234 6-104 (141)
155 2i6t_A Ubiquitin-conjugating e 98.4 1E-06 3.4E-11 86.2 11.5 109 127-253 14-140 (303)
156 3fwz_A Inner membrane protein 98.4 1.5E-06 5.1E-11 74.7 10.9 95 127-234 7-106 (140)
157 3uuw_A Putative oxidoreductase 98.4 2E-06 7E-11 83.4 12.6 94 126-237 5-100 (308)
158 1ldn_A L-lactate dehydrogenase 98.4 1.2E-06 3.9E-11 86.1 10.9 105 127-236 6-126 (316)
159 3p7m_A Malate dehydrogenase; p 98.4 1.7E-06 5.9E-11 85.2 11.9 105 127-236 5-125 (321)
160 3q2i_A Dehydrogenase; rossmann 98.4 2.8E-06 9.6E-11 84.2 13.1 95 126-237 12-109 (354)
161 2dc1_A L-aspartate dehydrogena 98.4 1.4E-06 4.7E-11 81.6 10.2 81 128-235 1-83 (236)
162 2d5c_A AROE, shikimate 5-dehyd 98.4 5.5E-07 1.9E-11 85.8 7.3 90 129-235 118-208 (263)
163 3db2_A Putative NADPH-dependen 98.4 2.2E-06 7.5E-11 84.9 11.9 96 124-237 2-100 (354)
164 3ldh_A Lactate dehydrogenase; 98.3 1.1E-06 3.8E-11 86.8 9.3 105 126-237 20-142 (330)
165 3pqe_A L-LDH, L-lactate dehydr 98.3 2.2E-06 7.7E-11 84.5 11.4 103 126-237 4-126 (326)
166 1x7d_A Ornithine cyclodeaminas 98.3 5.4E-07 1.9E-11 89.8 6.9 100 126-234 128-227 (350)
167 3tl2_A Malate dehydrogenase; c 98.3 1.2E-06 4E-11 86.2 9.1 105 126-236 7-130 (315)
168 4hkt_A Inositol 2-dehydrogenas 98.3 4.7E-06 1.6E-10 81.7 13.3 91 127-236 3-96 (331)
169 1y81_A Conserved hypothetical 98.3 8.4E-07 2.9E-11 76.8 6.7 84 126-231 13-100 (138)
170 3ezy_A Dehydrogenase; structur 98.3 4.4E-06 1.5E-10 82.4 12.8 93 127-236 2-97 (344)
171 3d0o_A L-LDH 1, L-lactate dehy 98.3 3.2E-06 1.1E-10 83.0 11.0 103 127-236 6-126 (317)
172 2d4a_B Malate dehydrogenase; a 98.3 2.2E-06 7.7E-11 83.8 9.5 103 129-236 1-119 (308)
173 1ez4_A Lactate dehydrogenase; 98.3 2.8E-06 9.5E-11 83.5 10.0 105 125-237 3-125 (318)
174 3e9m_A Oxidoreductase, GFO/IDH 98.3 3.5E-06 1.2E-10 82.8 10.8 95 126-237 4-101 (330)
175 3fi9_A Malate dehydrogenase; s 98.3 5.5E-06 1.9E-10 82.3 12.2 103 125-237 6-130 (343)
176 3qy9_A DHPR, dihydrodipicolina 98.3 2.5E-06 8.7E-11 80.7 9.2 127 126-298 2-129 (243)
177 2ho3_A Oxidoreductase, GFO/IDH 98.2 8.9E-06 3E-10 79.5 13.3 93 127-236 1-95 (325)
178 2hmt_A YUAA protein; RCK, KTN, 98.2 4.1E-06 1.4E-10 70.9 9.3 96 127-235 6-106 (144)
179 3mz0_A Inositol 2-dehydrogenas 98.2 1E-05 3.4E-10 79.8 13.5 95 127-237 2-100 (344)
180 3nep_X Malate dehydrogenase; h 98.2 3.2E-06 1.1E-10 83.0 9.3 102 128-237 1-122 (314)
181 3vku_A L-LDH, L-lactate dehydr 98.2 8.5E-06 2.9E-10 80.4 12.2 115 126-253 8-140 (326)
182 4aj2_A L-lactate dehydrogenase 98.2 4.7E-06 1.6E-10 82.4 10.3 118 124-253 16-151 (331)
183 2xxj_A L-LDH, L-lactate dehydr 98.2 5.2E-06 1.8E-10 81.3 10.5 101 128-236 1-119 (310)
184 3rc1_A Sugar 3-ketoreductase; 98.2 1.3E-05 4.3E-10 79.5 13.2 94 126-237 26-123 (350)
185 1mld_A Malate dehydrogenase; o 98.2 7.9E-06 2.7E-10 80.1 11.1 101 128-237 1-121 (314)
186 2x0j_A Malate dehydrogenase; o 98.2 1.6E-05 5.5E-10 77.3 13.1 115 128-255 1-135 (294)
187 3h9u_A Adenosylhomocysteinase; 98.2 4.1E-06 1.4E-10 85.4 9.2 92 126-236 210-301 (436)
188 2zqz_A L-LDH, L-lactate dehydr 98.2 6.6E-06 2.3E-10 81.2 10.3 103 127-237 9-129 (326)
189 1id1_A Putative potassium chan 98.2 1.4E-05 4.6E-10 69.4 11.2 102 127-236 3-108 (153)
190 1v8b_A Adenosylhomocysteinase; 98.1 5.5E-06 1.9E-10 85.6 9.7 93 126-237 256-348 (479)
191 3cea_A MYO-inositol 2-dehydrog 98.1 1.4E-05 4.7E-10 78.6 11.9 94 126-237 7-105 (346)
192 3d64_A Adenosylhomocysteinase; 98.1 5.4E-06 1.9E-10 86.0 9.2 93 126-237 276-368 (494)
193 3ec7_A Putative dehydrogenase; 98.1 2E-05 6.9E-10 78.3 13.0 95 127-237 23-121 (357)
194 1ydw_A AX110P-like protein; st 98.1 2.1E-05 7.1E-10 78.1 13.1 100 124-237 3-105 (362)
195 2glx_A 1,5-anhydro-D-fructose 98.1 2.2E-05 7.6E-10 76.6 13.1 91 128-236 1-95 (332)
196 3c1a_A Putative oxidoreductase 98.1 8E-06 2.7E-10 79.5 9.1 91 126-236 9-102 (315)
197 2duw_A Putative COA-binding pr 98.1 1.9E-06 6.4E-11 75.1 4.0 84 127-230 13-100 (145)
198 1tlt_A Putative oxidoreductase 98.1 1.5E-05 5.1E-10 77.6 10.8 93 126-236 4-98 (319)
199 1omo_A Alanine dehydrogenase; 98.1 8.1E-06 2.8E-10 80.3 8.7 93 126-232 124-216 (322)
200 3evn_A Oxidoreductase, GFO/IDH 98.0 9.3E-06 3.2E-10 79.6 8.8 94 126-237 4-101 (329)
201 1xea_A Oxidoreductase, GFO/IDH 98.0 2.3E-05 7.9E-10 76.5 11.3 93 127-236 2-96 (323)
202 3e18_A Oxidoreductase; dehydro 98.0 3.5E-05 1.2E-09 76.6 12.6 92 127-237 5-99 (359)
203 3abi_A Putative uncharacterize 98.0 6.5E-06 2.2E-10 82.1 7.2 83 126-219 15-97 (365)
204 3hdj_A Probable ornithine cycl 98.0 5.2E-06 1.8E-10 81.5 6.3 94 126-233 120-213 (313)
205 3p2y_A Alanine dehydrogenase/p 98.0 6.1E-06 2.1E-10 82.9 6.8 105 127-233 184-302 (381)
206 3ulk_A Ketol-acid reductoisome 98.0 2.5E-05 8.5E-10 79.3 11.0 93 127-237 37-135 (491)
207 3ohs_X Trans-1,2-dihydrobenzen 98.0 2.2E-05 7.6E-10 77.0 10.4 95 127-237 2-100 (334)
208 4had_A Probable oxidoreductase 98.0 3.4E-05 1.2E-09 76.0 11.5 97 125-238 21-121 (350)
209 1smk_A Malate dehydrogenase, g 98.0 2.6E-05 8.9E-10 76.8 10.6 115 127-253 8-144 (326)
210 3ce6_A Adenosylhomocysteinase; 98.0 1.3E-05 4.6E-10 83.2 8.8 92 125-235 272-363 (494)
211 4f3y_A DHPR, dihydrodipicolina 98.0 1.9E-05 6.6E-10 75.9 9.1 148 126-304 6-155 (272)
212 2z2v_A Hypothetical protein PH 98.0 2.1E-05 7E-10 78.8 9.6 94 127-234 16-109 (365)
213 3gvp_A Adenosylhomocysteinase 97.9 1.3E-05 4.3E-10 81.6 7.3 91 125-235 218-309 (435)
214 3bio_A Oxidoreductase, GFO/IDH 97.9 4.3E-05 1.5E-09 74.4 10.7 86 127-232 9-95 (304)
215 4dio_A NAD(P) transhydrogenase 97.9 1.2E-05 4.1E-10 81.4 6.9 105 127-233 190-312 (405)
216 1b8p_A Protein (malate dehydro 97.9 4.2E-05 1.4E-09 75.3 10.7 102 127-236 5-136 (329)
217 3m2t_A Probable dehydrogenase; 97.9 4.3E-05 1.5E-09 75.9 10.8 96 126-238 4-103 (359)
218 3u62_A Shikimate dehydrogenase 97.9 1E-05 3.5E-10 77.0 5.9 91 129-235 110-202 (253)
219 3kux_A Putative oxidoreductase 97.9 6.9E-05 2.4E-09 74.0 12.0 95 124-238 4-102 (352)
220 3u95_A Glycoside hydrolase, fa 97.9 2E-05 6.9E-10 81.6 8.3 119 128-254 1-175 (477)
221 3moi_A Probable dehydrogenase; 97.9 6.4E-05 2.2E-09 75.4 11.5 93 127-237 2-98 (387)
222 3n58_A Adenosylhomocysteinase; 97.9 3E-05 1E-09 79.2 9.0 92 125-236 245-337 (464)
223 3l9w_A Glutathione-regulated p 97.8 5.3E-05 1.8E-09 77.0 10.3 99 127-234 4-103 (413)
224 1h6d_A Precursor form of gluco 97.8 3.9E-05 1.3E-09 78.3 9.4 99 126-237 82-184 (433)
225 3ijp_A DHPR, dihydrodipicolina 97.8 7.4E-05 2.5E-09 72.3 10.7 153 123-305 17-171 (288)
226 3u3x_A Oxidoreductase; structu 97.8 8.1E-05 2.8E-09 74.0 11.2 97 124-238 23-123 (361)
227 2p2s_A Putative oxidoreductase 97.8 4.8E-05 1.7E-09 74.6 9.3 94 126-237 3-100 (336)
228 3upl_A Oxidoreductase; rossman 97.8 0.00068 2.3E-08 69.4 17.9 107 126-236 22-142 (446)
229 4gqa_A NAD binding oxidoreduct 97.8 7E-05 2.4E-09 75.6 10.6 102 121-238 20-131 (412)
230 4g65_A TRK system potassium up 97.8 2.8E-05 9.7E-10 80.2 7.4 79 126-213 2-82 (461)
231 2egg_A AROE, shikimate 5-dehyd 97.8 4.1E-05 1.4E-09 74.4 8.1 97 127-234 141-241 (297)
232 3hhp_A Malate dehydrogenase; M 97.8 8.3E-05 2.8E-09 72.8 10.1 99 128-237 1-122 (312)
233 2nu8_A Succinyl-COA ligase [AD 97.8 8.5E-05 2.9E-09 71.9 10.1 105 126-250 6-113 (288)
234 3e82_A Putative oxidoreductase 97.8 0.00024 8.1E-09 70.7 13.4 92 126-237 6-101 (364)
235 3f4l_A Putative oxidoreductase 97.8 5E-05 1.7E-09 74.9 8.2 93 127-237 2-99 (345)
236 3don_A Shikimate dehydrogenase 97.7 8.5E-06 2.9E-10 78.6 2.2 93 127-234 117-211 (277)
237 1zh8_A Oxidoreductase; TM0312, 97.7 0.00016 5.6E-09 71.1 11.3 96 127-238 18-117 (340)
238 2vhw_A Alanine dehydrogenase; 97.7 2.4E-05 8.4E-10 78.5 5.3 97 127-233 168-268 (377)
239 2nvw_A Galactose/lactose metab 97.7 0.00021 7.2E-09 73.9 12.4 86 125-221 37-130 (479)
240 2ixa_A Alpha-N-acetylgalactosa 97.7 0.00025 8.4E-09 72.5 12.5 102 124-237 17-125 (444)
241 3v5n_A Oxidoreductase; structu 97.7 0.00016 5.5E-09 73.3 10.7 98 126-238 36-145 (417)
242 3dty_A Oxidoreductase, GFO/IDH 97.7 8.4E-05 2.9E-09 74.8 8.3 98 126-238 11-120 (398)
243 2d59_A Hypothetical protein PH 97.7 0.00011 3.9E-09 63.6 8.0 90 124-237 19-112 (144)
244 3gdo_A Uncharacterized oxidore 97.6 0.00027 9.3E-09 70.0 11.4 92 126-237 4-99 (358)
245 1o6z_A MDH, malate dehydrogena 97.6 0.00019 6.6E-09 69.8 10.1 103 128-236 1-122 (303)
246 1iuk_A Hypothetical protein TT 97.6 3.9E-05 1.3E-09 66.3 4.5 89 126-237 12-105 (140)
247 1up7_A 6-phospho-beta-glucosid 97.6 0.00029 9.8E-09 71.7 11.6 113 127-252 2-155 (417)
248 2eez_A Alanine dehydrogenase; 97.6 6.8E-05 2.3E-09 74.9 6.8 98 127-233 166-266 (369)
249 2vt3_A REX, redox-sensing tran 97.6 4E-05 1.4E-09 71.1 4.6 81 126-221 84-167 (215)
250 1x13_A NAD(P) transhydrogenase 97.6 5.7E-05 1.9E-09 76.5 6.1 105 127-233 172-292 (401)
251 4h7p_A Malate dehydrogenase; s 97.5 0.00048 1.6E-08 68.3 11.6 104 128-237 25-154 (345)
252 1f06_A MESO-diaminopimelate D- 97.5 0.00011 3.8E-09 71.9 6.8 84 127-231 3-87 (320)
253 1p77_A Shikimate 5-dehydrogena 97.5 0.0001 3.4E-09 70.6 6.3 95 127-234 119-215 (272)
254 2aef_A Calcium-gated potassium 97.5 0.00013 4.5E-09 67.6 6.6 93 127-233 9-105 (234)
255 4h3v_A Oxidoreductase domain p 97.5 0.00042 1.4E-08 68.5 10.6 95 128-238 7-110 (390)
256 4gmf_A Yersiniabactin biosynth 97.5 0.00023 7.9E-09 71.3 8.8 95 127-239 7-106 (372)
257 1gpj_A Glutamyl-tRNA reductase 97.5 0.0002 6.8E-09 72.4 8.4 71 126-210 166-238 (404)
258 1nyt_A Shikimate 5-dehydrogena 97.5 0.00024 8.1E-09 67.9 8.2 95 127-234 119-215 (271)
259 3o8q_A Shikimate 5-dehydrogena 97.5 0.00012 4E-09 70.7 6.1 97 126-234 125-222 (281)
260 1l7d_A Nicotinamide nucleotide 97.5 0.00016 5.4E-09 72.6 7.3 106 126-233 171-294 (384)
261 1dih_A Dihydrodipicolinate red 97.5 0.00029 9.9E-09 67.6 8.6 149 127-305 5-155 (273)
262 3i23_A Oxidoreductase, GFO/IDH 97.5 0.00046 1.6E-08 68.1 10.3 94 127-237 2-99 (349)
263 1oi7_A Succinyl-COA synthetase 97.5 0.00078 2.7E-08 65.1 11.7 105 126-250 6-113 (288)
264 4fb5_A Probable oxidoreductase 97.4 0.00051 1.7E-08 67.9 10.5 94 129-238 27-129 (393)
265 3oqb_A Oxidoreductase; structu 97.4 0.00036 1.2E-08 69.5 9.3 95 127-238 6-118 (383)
266 7mdh_A Protein (malate dehydro 97.4 0.00033 1.1E-08 70.2 8.7 111 121-237 26-162 (375)
267 3ius_A Uncharacterized conserv 97.4 0.0005 1.7E-08 64.9 9.1 68 127-208 5-72 (286)
268 2yv1_A Succinyl-COA ligase [AD 97.4 0.0019 6.3E-08 62.6 13.1 106 125-250 11-119 (294)
269 3btv_A Galactose/lactose metab 97.4 0.00051 1.7E-08 70.1 9.4 84 126-220 19-110 (438)
270 3fhl_A Putative oxidoreductase 97.4 0.00065 2.2E-08 67.3 10.0 92 126-237 4-99 (362)
271 3pwz_A Shikimate dehydrogenase 97.3 0.0003 1E-08 67.5 7.0 95 127-234 120-216 (272)
272 3jyo_A Quinate/shikimate dehyd 97.3 0.00029 1E-08 67.9 6.9 99 127-233 127-229 (283)
273 3o9z_A Lipopolysaccaride biosy 97.3 0.00038 1.3E-08 67.8 7.8 93 127-238 3-107 (312)
274 2axq_A Saccharopine dehydrogen 97.3 0.00073 2.5E-08 69.7 10.0 82 127-215 23-104 (467)
275 1p9l_A Dihydrodipicolinate red 97.3 0.002 6.8E-08 60.8 12.1 104 128-270 1-108 (245)
276 4ina_A Saccharopine dehydrogen 97.3 0.00028 9.5E-09 71.4 6.6 92 127-219 1-96 (405)
277 3r6d_A NAD-dependent epimerase 97.3 0.00031 1E-08 64.0 6.3 76 127-209 4-83 (221)
278 3oa2_A WBPB; oxidoreductase, s 97.3 0.00043 1.5E-08 67.6 7.6 93 127-238 3-108 (318)
279 1hye_A L-lactate/malate dehydr 97.3 0.0021 7.3E-08 62.6 12.6 101 128-236 1-125 (313)
280 3rui_A Ubiquitin-like modifier 97.3 0.00058 2E-08 67.5 8.5 35 127-162 34-68 (340)
281 2yv2_A Succinyl-COA synthetase 97.3 0.0028 9.5E-08 61.5 13.1 105 126-250 12-120 (297)
282 3ond_A Adenosylhomocysteinase; 97.3 0.00065 2.2E-08 70.2 8.9 91 126-235 264-354 (488)
283 3phh_A Shikimate dehydrogenase 97.3 0.00024 8.2E-09 68.1 5.2 90 127-234 118-210 (269)
284 5mdh_A Malate dehydrogenase; o 97.2 0.0013 4.3E-08 65.0 10.3 102 127-236 3-132 (333)
285 1pjc_A Protein (L-alanine dehy 97.2 0.00044 1.5E-08 68.8 6.9 96 127-233 167-267 (361)
286 1jw9_B Molybdopterin biosynthe 97.2 0.00062 2.1E-08 64.3 7.3 87 127-219 31-141 (249)
287 4ew6_A D-galactose-1-dehydroge 97.2 0.00068 2.3E-08 66.5 7.7 87 127-238 25-116 (330)
288 2czc_A Glyceraldehyde-3-phosph 97.2 0.00068 2.3E-08 66.8 7.7 91 127-218 2-98 (334)
289 1nvm_B Acetaldehyde dehydrogen 97.1 0.00091 3.1E-08 65.4 8.3 95 126-233 3-104 (312)
290 3mtj_A Homoserine dehydrogenas 97.1 0.0018 6.1E-08 66.3 10.7 94 124-235 7-112 (444)
291 3dr3_A N-acetyl-gamma-glutamyl 97.1 0.00069 2.4E-08 66.9 7.4 100 127-236 4-109 (337)
292 1npy_A Hypothetical shikimate 97.1 0.00091 3.1E-08 64.1 7.8 68 127-210 119-186 (271)
293 1leh_A Leucine dehydrogenase; 97.1 0.0011 3.7E-08 66.3 8.5 88 127-235 173-262 (364)
294 2ozp_A N-acetyl-gamma-glutamyl 97.1 0.00075 2.6E-08 66.9 7.2 100 125-236 2-102 (345)
295 2dt5_A AT-rich DNA-binding pro 97.1 0.00022 7.6E-09 65.9 3.0 82 126-221 79-162 (211)
296 1ff9_A Saccharopine reductase; 97.1 0.00068 2.3E-08 69.6 7.0 74 127-211 3-80 (450)
297 3h2s_A Putative NADH-flavin re 97.1 0.0019 6.4E-08 58.5 9.2 69 128-208 1-71 (224)
298 3ip3_A Oxidoreductase, putativ 97.1 0.00048 1.6E-08 67.6 5.3 97 127-238 2-102 (337)
299 3e8x_A Putative NAD-dependent 97.0 0.0013 4.4E-08 60.4 7.9 71 127-208 21-93 (236)
300 3fbt_A Chorismate mutase and s 97.0 0.0008 2.7E-08 64.9 6.6 91 126-233 121-214 (282)
301 3ew7_A LMO0794 protein; Q8Y8U8 97.0 0.0025 8.6E-08 57.3 9.1 70 128-209 1-71 (221)
302 1b7g_O Protein (glyceraldehyde 97.0 0.0016 5.4E-08 64.4 8.2 91 127-219 1-97 (340)
303 1y7t_A Malate dehydrogenase; N 97.0 0.0016 5.4E-08 63.7 8.1 72 125-206 2-87 (327)
304 2fp4_A Succinyl-COA ligase [GD 97.0 0.0069 2.3E-07 58.9 12.5 94 126-239 12-109 (305)
305 3dfz_A SIRC, precorrin-2 dehyd 96.9 0.0053 1.8E-07 57.1 11.0 81 127-220 31-112 (223)
306 4gsl_A Ubiquitin-like modifier 96.9 0.0013 4.5E-08 69.5 7.1 35 127-162 326-360 (615)
307 3ngx_A Bifunctional protein fo 96.8 0.001 3.6E-08 63.7 5.4 74 125-233 148-222 (276)
308 1lnq_A MTHK channels, potassiu 96.8 0.0014 4.7E-08 64.1 6.5 96 127-233 115-211 (336)
309 1j5p_A Aspartate dehydrogenase 96.8 0.0014 4.9E-08 62.0 6.1 84 125-236 10-94 (253)
310 3keo_A Redox-sensing transcrip 96.8 0.0017 5.8E-08 60.0 6.1 82 126-221 83-170 (212)
311 3eag_A UDP-N-acetylmuramate:L- 96.8 0.0035 1.2E-07 61.3 8.7 67 126-206 3-73 (326)
312 3tnl_A Shikimate dehydrogenase 96.7 0.0025 8.6E-08 62.3 7.3 98 127-233 154-263 (315)
313 3dhn_A NAD-dependent epimerase 96.7 0.00059 2E-08 62.1 2.7 76 124-209 1-77 (227)
314 3p2o_A Bifunctional protein fo 96.7 0.0019 6.4E-08 62.2 6.1 73 126-233 159-232 (285)
315 3ff4_A Uncharacterized protein 96.7 0.0016 5.4E-08 54.9 4.9 87 127-238 4-94 (122)
316 4a26_A Putative C-1-tetrahydro 96.7 0.0016 5.3E-08 63.2 5.4 73 126-233 164-239 (300)
317 3l07_A Bifunctional protein fo 96.7 0.0022 7.5E-08 61.7 6.4 73 126-233 160-233 (285)
318 2c2x_A Methylenetetrahydrofola 96.7 0.0027 9.2E-08 61.0 7.0 73 126-233 157-232 (281)
319 1a4i_A Methylenetetrahydrofola 96.7 0.0033 1.1E-07 60.9 7.7 73 126-233 164-237 (301)
320 1b0a_A Protein (fold bifunctio 96.7 0.0022 7.7E-08 61.7 6.3 73 126-233 158-231 (288)
321 2ep5_A 350AA long hypothetical 96.7 0.0039 1.3E-07 61.8 8.2 102 125-234 2-109 (350)
322 1cf2_P Protein (glyceraldehyde 96.7 0.0032 1.1E-07 62.1 7.6 103 127-233 1-109 (337)
323 1u8f_O GAPDH, glyceraldehyde-3 96.6 0.013 4.6E-07 57.6 11.5 105 127-235 3-124 (335)
324 1xyg_A Putative N-acetyl-gamma 96.6 0.0031 1.1E-07 62.7 7.1 98 126-234 15-113 (359)
325 2nqt_A N-acetyl-gamma-glutamyl 96.6 0.0014 4.7E-08 65.2 4.4 100 126-236 8-113 (352)
326 1lc0_A Biliverdin reductase A; 96.6 0.0033 1.1E-07 60.5 6.8 89 126-237 6-99 (294)
327 4a5o_A Bifunctional protein fo 96.5 0.0028 9.5E-08 61.0 5.9 73 126-233 160-233 (286)
328 1vl6_A Malate oxidoreductase; 96.5 0.0053 1.8E-07 61.5 8.2 93 127-236 192-297 (388)
329 3qvo_A NMRA family protein; st 96.5 0.00052 1.8E-08 63.4 0.8 76 127-210 23-99 (236)
330 1qyd_A Pinoresinol-lariciresin 96.5 0.0046 1.6E-07 58.9 7.5 77 126-209 3-86 (313)
331 3h2z_A Mannitol-1-phosphate 5- 96.5 0.0039 1.3E-07 62.6 7.3 108 128-237 1-125 (382)
332 3do5_A HOM, homoserine dehydro 96.5 0.0051 1.8E-07 60.4 7.8 97 127-235 2-117 (327)
333 1edz_A 5,10-methylenetetrahydr 96.5 0.0018 6.2E-08 63.4 4.5 94 127-233 177-275 (320)
334 3t4e_A Quinate/shikimate dehyd 96.5 0.0038 1.3E-07 61.0 6.7 99 127-233 148-257 (312)
335 1zud_1 Adenylyltransferase THI 96.5 0.0057 2E-07 57.6 7.7 35 127-162 28-62 (251)
336 1qyc_A Phenylcoumaran benzylic 96.5 0.0048 1.6E-07 58.6 7.2 87 126-219 3-100 (308)
337 2ejw_A HDH, homoserine dehydro 96.4 0.0012 4.1E-08 65.1 2.5 89 127-235 3-100 (332)
338 3ing_A Homoserine dehydrogenas 96.4 0.0053 1.8E-07 60.3 7.1 98 127-236 4-120 (325)
339 3vh1_A Ubiquitin-like modifier 96.3 0.011 3.7E-07 62.5 9.4 34 127-161 327-360 (598)
340 1ys4_A Aspartate-semialdehyde 96.3 0.0073 2.5E-07 59.8 7.7 103 127-234 8-115 (354)
341 2yyy_A Glyceraldehyde-3-phosph 96.2 0.017 5.9E-07 57.0 9.7 102 127-231 2-111 (343)
342 1nvt_A Shikimate 5'-dehydrogen 96.2 0.0069 2.4E-07 58.0 6.6 99 127-233 128-230 (287)
343 2ph5_A Homospermidine synthase 96.2 0.0057 1.9E-07 62.9 6.1 95 127-234 13-115 (480)
344 1hdo_A Biliverdin IX beta redu 96.2 0.0014 5E-08 58.1 1.5 35 128-164 4-39 (206)
345 1vkn_A N-acetyl-gamma-glutamyl 96.2 0.0084 2.9E-07 59.5 7.1 99 125-236 11-110 (351)
346 3e48_A Putative nucleoside-dip 96.1 0.0034 1.2E-07 59.3 4.1 72 128-208 1-74 (289)
347 4hb9_A Similarities with proba 96.1 0.004 1.4E-07 61.2 4.4 33 128-162 2-34 (412)
348 2gas_A Isoflavone reductase; N 96.0 0.0052 1.8E-07 58.3 5.0 84 127-219 2-99 (307)
349 4gx0_A TRKA domain protein; me 96.0 0.006 2E-07 63.9 5.5 122 94-234 321-443 (565)
350 3e5r_O PP38, glyceraldehyde-3- 96.0 0.021 7.3E-07 56.2 9.1 100 128-232 4-125 (337)
351 3lk7_A UDP-N-acetylmuramoylala 96.0 0.012 3.9E-07 60.2 7.4 66 127-206 9-79 (451)
352 3c8m_A Homoserine dehydrogenas 96.0 0.0061 2.1E-07 59.9 5.1 97 126-235 5-123 (331)
353 1xq6_A Unknown protein; struct 95.9 0.017 5.7E-07 52.7 7.4 73 126-208 3-78 (253)
354 3c1o_A Eugenol synthase; pheny 95.9 0.0069 2.4E-07 58.0 5.0 85 127-220 4-101 (321)
355 2x4g_A Nucleoside-diphosphate- 95.9 0.0035 1.2E-07 60.4 2.8 73 127-208 13-86 (342)
356 3i6i_A Putative leucoanthocyan 95.8 0.0074 2.5E-07 58.7 5.0 86 127-221 10-108 (346)
357 3kkj_A Amine oxidase, flavin-c 95.8 0.007 2.4E-07 53.9 4.5 33 128-162 3-35 (336)
358 3dqp_A Oxidoreductase YLBE; al 95.8 0.0026 8.8E-08 57.7 1.5 70 128-208 1-72 (219)
359 3h8v_A Ubiquitin-like modifier 95.8 0.0089 3E-07 57.8 5.4 35 127-162 36-70 (292)
360 4g65_A TRK system potassium up 95.7 0.034 1.2E-06 57.0 9.9 92 127-229 235-330 (461)
361 1y1p_A ARII, aldehyde reductas 95.7 0.027 9.3E-07 53.9 8.6 42 126-169 10-52 (342)
362 2wm3_A NMRA-like family domain 95.7 0.0094 3.2E-07 56.5 5.0 75 126-208 4-81 (299)
363 4dpl_A Malonyl-COA/succinyl-CO 95.7 0.009 3.1E-07 59.4 5.0 105 124-235 4-112 (359)
364 4dpk_A Malonyl-COA/succinyl-CO 95.7 0.009 3.1E-07 59.4 5.0 105 124-235 4-112 (359)
365 3m2p_A UDP-N-acetylglucosamine 95.6 0.0098 3.3E-07 56.7 4.7 69 127-208 2-71 (311)
366 3h5n_A MCCB protein; ubiquitin 95.6 0.086 2.9E-06 52.1 11.6 35 127-162 118-152 (353)
367 1c1d_A L-phenylalanine dehydro 95.6 0.04 1.4E-06 54.7 9.1 88 127-236 175-264 (355)
368 2r6j_A Eugenol synthase 1; phe 95.5 0.01 3.5E-07 56.8 4.8 85 127-220 11-103 (318)
369 2hjs_A USG-1 protein homolog; 95.5 0.011 3.7E-07 58.4 4.9 91 127-234 6-100 (340)
370 2jl1_A Triphenylmethane reduct 95.5 0.005 1.7E-07 57.9 2.2 72 128-208 1-75 (287)
371 3pwk_A Aspartate-semialdehyde 95.5 0.013 4.4E-07 58.4 5.4 93 127-235 2-97 (366)
372 3ruf_A WBGU; rossmann fold, UD 95.4 0.019 6.6E-07 55.5 6.2 77 125-208 23-109 (351)
373 2b0j_A 5,10-methenyltetrahydro 95.4 0.96 3.3E-05 43.3 17.4 164 185-360 127-303 (358)
374 3hsk_A Aspartate-semialdehyde 95.4 0.022 7.6E-07 57.0 6.7 101 127-235 19-126 (381)
375 2a9f_A Putative malic enzyme ( 95.3 0.022 7.4E-07 57.2 6.3 96 128-236 189-292 (398)
376 2r00_A Aspartate-semialdehyde 95.3 0.012 4.1E-07 57.9 4.3 92 127-234 3-97 (336)
377 3tum_A Shikimate dehydrogenase 95.3 0.022 7.5E-07 54.3 6.0 98 126-233 124-225 (269)
378 3sju_A Keto reductase; short-c 95.3 0.063 2.1E-06 50.7 9.2 47 122-170 19-66 (279)
379 1t4b_A Aspartate-semialdehyde 95.3 0.074 2.5E-06 53.0 10.0 95 127-235 1-100 (367)
380 2csu_A 457AA long hypothetical 95.2 0.06 2.1E-06 55.1 9.6 89 127-237 8-100 (457)
381 1lu9_A Methylene tetrahydromet 95.2 0.036 1.2E-06 52.8 7.3 74 127-208 119-197 (287)
382 3cps_A Glyceraldehyde 3-phosph 95.2 0.059 2E-06 53.4 8.9 103 127-233 17-138 (354)
383 3pzr_A Aspartate-semialdehyde 95.2 0.1 3.6E-06 51.9 10.8 93 128-234 1-98 (370)
384 3gpi_A NAD-dependent epimerase 95.1 0.017 5.8E-07 54.4 4.7 36 126-163 2-37 (286)
385 3o38_A Short chain dehydrogena 95.1 0.097 3.3E-06 48.7 9.8 42 127-170 22-65 (266)
386 2gn4_A FLAA1 protein, UDP-GLCN 95.0 0.047 1.6E-06 53.3 7.5 77 125-208 19-100 (344)
387 3uw3_A Aspartate-semialdehyde 94.9 0.13 4.3E-06 51.5 10.5 94 127-234 4-102 (377)
388 1c0p_A D-amino acid oxidase; a 94.9 0.027 9.1E-07 54.9 5.5 34 126-161 5-38 (363)
389 3rkr_A Short chain oxidoreduct 94.8 0.084 2.9E-06 49.2 8.7 42 127-170 29-71 (262)
390 3slg_A PBGP3 protein; structur 94.8 0.0095 3.2E-07 58.3 2.1 39 126-166 23-63 (372)
391 3two_A Mannitol dehydrogenase; 94.8 0.052 1.8E-06 52.9 7.4 87 127-232 177-264 (348)
392 4gx0_A TRKA domain protein; me 94.8 0.069 2.3E-06 55.8 8.6 43 127-171 127-169 (565)
393 4dgk_A Phytoene dehydrogenase; 94.8 0.022 7.4E-07 58.1 4.6 35 127-163 1-35 (501)
394 2zcu_A Uncharacterized oxidore 94.7 0.013 4.3E-07 54.9 2.6 71 129-208 1-74 (286)
395 3ip1_A Alcohol dehydrogenase, 94.7 0.25 8.5E-06 49.2 12.2 99 127-232 214-317 (404)
396 2bka_A CC3, TAT-interacting pr 94.7 0.01 3.5E-07 54.3 1.7 74 126-208 17-93 (242)
397 3b1j_A Glyceraldehyde 3-phosph 94.6 0.11 3.7E-06 51.2 9.1 93 127-219 2-111 (339)
398 2ywl_A Thioredoxin reductase r 94.6 0.029 9.9E-07 48.9 4.5 34 127-162 1-34 (180)
399 3dme_A Conserved exported prot 94.6 0.027 9.2E-07 54.3 4.7 34 127-162 4-37 (369)
400 2x5j_O E4PDH, D-erythrose-4-ph 94.6 0.14 4.9E-06 50.3 10.0 103 127-233 2-125 (339)
401 3enk_A UDP-glucose 4-epimerase 94.6 0.03 1E-06 53.8 5.0 38 124-163 2-40 (341)
402 1rm4_O Glyceraldehyde 3-phosph 94.6 0.18 6.1E-06 49.6 10.6 104 127-233 1-122 (337)
403 2d2i_A Glyceraldehyde 3-phosph 94.6 0.17 5.7E-06 50.6 10.4 92 127-218 2-110 (380)
404 2dvm_A Malic enzyme, 439AA lon 94.6 0.024 8.3E-07 57.8 4.4 100 127-236 186-299 (439)
405 1hdg_O Holo-D-glyceraldehyde-3 94.5 0.14 4.8E-06 50.2 9.6 102 128-233 1-122 (332)
406 1y8q_A Ubiquitin-like 1 activa 94.5 0.31 1.1E-05 47.9 12.2 85 127-220 36-146 (346)
407 4hv4_A UDP-N-acetylmuramate--L 94.5 0.054 1.9E-06 55.9 6.9 71 124-209 19-93 (494)
408 1gad_O D-glyceraldehyde-3-phos 94.5 0.13 4.6E-06 50.3 9.4 104 127-234 1-120 (330)
409 2c5a_A GDP-mannose-3', 5'-epim 94.5 0.01 3.4E-07 58.6 1.3 36 126-163 28-64 (379)
410 1sb8_A WBPP; epimerase, 4-epim 94.5 0.058 2E-06 52.2 6.8 35 126-162 26-61 (352)
411 3hn7_A UDP-N-acetylmuramate-L- 94.5 0.091 3.1E-06 54.7 8.6 74 122-209 14-92 (524)
412 3qj4_A Renalase; FAD/NAD(P)-bi 94.4 0.025 8.4E-07 54.7 4.0 34 127-162 1-37 (342)
413 1pjq_A CYSG, siroheme synthase 94.4 0.37 1.3E-05 49.2 12.9 72 127-211 12-84 (457)
414 4b4o_A Epimerase family protei 94.4 0.035 1.2E-06 52.5 4.9 34 128-163 1-35 (298)
415 3rp8_A Flavoprotein monooxygen 94.4 0.036 1.2E-06 55.0 5.1 34 127-162 23-56 (407)
416 3ihm_A Styrene monooxygenase A 94.3 0.032 1.1E-06 56.2 4.7 34 127-162 22-55 (430)
417 4id9_A Short-chain dehydrogena 94.3 0.021 7.3E-07 55.1 3.2 69 125-208 17-86 (347)
418 1xgk_A Nitrogen metabolite rep 94.3 0.037 1.3E-06 54.3 4.9 75 127-208 5-82 (352)
419 1kyq_A Met8P, siroheme biosynt 94.3 0.056 1.9E-06 51.7 6.0 34 127-162 13-46 (274)
420 3tz6_A Aspartate-semialdehyde 94.2 0.031 1E-06 55.3 4.2 92 128-235 2-96 (344)
421 2d8a_A PH0655, probable L-thre 94.2 0.13 4.6E-06 50.0 8.8 83 126-219 167-257 (348)
422 1xu9_A Corticosteroid 11-beta- 94.2 0.34 1.2E-05 45.5 11.3 43 126-170 27-70 (286)
423 1e3j_A NADP(H)-dependent ketos 94.2 0.34 1.2E-05 47.2 11.6 96 127-232 169-270 (352)
424 1vm6_A DHPR, dihydrodipicolina 94.2 0.3 1E-05 45.2 10.5 101 125-270 10-113 (228)
425 1iy8_A Levodione reductase; ox 94.2 0.34 1.2E-05 45.0 11.1 41 127-169 13-54 (267)
426 1y56_B Sarcosine oxidase; dehy 94.2 0.039 1.3E-06 53.9 4.8 33 127-161 5-37 (382)
427 3nrn_A Uncharacterized protein 94.1 0.038 1.3E-06 55.0 4.7 33 128-162 1-33 (421)
428 1yvv_A Amine oxidase, flavin-c 94.1 0.037 1.3E-06 52.9 4.5 34 127-162 2-35 (336)
429 1yxm_A Pecra, peroxisomal tran 94.1 0.36 1.2E-05 45.6 11.4 42 127-170 18-60 (303)
430 2o7s_A DHQ-SDH PR, bifunctiona 94.1 0.085 2.9E-06 54.9 7.4 43 127-171 364-406 (523)
431 3c96_A Flavin-containing monoo 94.0 0.043 1.5E-06 54.5 4.9 34 127-162 4-38 (410)
432 2bll_A Protein YFBG; decarboxy 94.0 0.027 9.1E-07 54.1 3.2 36 128-165 1-38 (345)
433 2ydy_A Methionine adenosyltran 94.0 0.051 1.7E-06 51.6 5.2 35 127-163 2-37 (315)
434 2gdz_A NAD+-dependent 15-hydro 94.0 0.24 8.1E-06 46.1 9.7 41 127-169 7-48 (267)
435 2xdo_A TETX2 protein; tetracyc 94.0 0.049 1.7E-06 53.9 5.1 34 127-162 26-59 (398)
436 3cmc_O GAPDH, glyceraldehyde-3 94.0 0.14 4.9E-06 50.2 8.4 103 127-233 1-121 (334)
437 2oln_A NIKD protein; flavoprot 94.0 0.038 1.3E-06 54.4 4.3 34 127-162 4-37 (397)
438 3tfo_A Putative 3-oxoacyl-(acy 94.0 0.16 5.6E-06 47.6 8.5 42 127-170 4-46 (264)
439 1tt5_B Ubiquitin-activating en 93.9 0.058 2E-06 54.9 5.6 84 127-219 40-149 (434)
440 3ka7_A Oxidoreductase; structu 93.9 0.047 1.6E-06 54.2 4.8 33 128-162 1-33 (425)
441 1pl8_A Human sorbitol dehydrog 93.9 0.32 1.1E-05 47.4 10.8 89 127-232 172-272 (356)
442 3oz2_A Digeranylgeranylglycero 93.8 0.038 1.3E-06 53.6 4.0 32 129-162 6-37 (397)
443 1pqw_A Polyketide synthase; ro 93.8 0.19 6.5E-06 44.5 8.2 44 127-172 39-83 (198)
444 3lf2_A Short chain oxidoreduct 93.7 0.45 1.5E-05 44.2 11.1 42 127-170 8-50 (265)
445 3hm2_A Precorrin-6Y C5,15-meth 93.7 0.48 1.6E-05 40.5 10.5 97 127-232 26-126 (178)
446 1fmc_A 7 alpha-hydroxysteroid 93.7 0.28 9.5E-06 44.8 9.4 41 127-169 11-52 (255)
447 1orr_A CDP-tyvelose-2-epimeras 93.7 0.087 3E-06 50.5 6.1 33 127-161 1-34 (347)
448 2rh8_A Anthocyanidin reductase 93.6 0.13 4.5E-06 49.2 7.4 35 127-163 9-44 (338)
449 2vou_A 2,6-dihydroxypyridine h 93.6 0.059 2E-06 53.3 5.0 34 127-162 5-38 (397)
450 3f1l_A Uncharacterized oxidore 93.6 0.45 1.5E-05 43.9 10.8 42 127-170 12-54 (252)
451 3lyl_A 3-oxoacyl-(acyl-carrier 93.6 0.33 1.1E-05 44.3 9.9 42 127-170 5-47 (247)
452 3awd_A GOX2181, putative polyo 93.6 0.31 1.1E-05 44.7 9.7 41 127-169 13-54 (260)
453 3fpf_A Mtnas, putative unchara 93.6 0.21 7.2E-06 48.2 8.7 96 126-231 122-220 (298)
454 3uog_A Alcohol dehydrogenase; 93.6 0.21 7.2E-06 49.0 8.9 83 127-220 190-278 (363)
455 1p0f_A NADP-dependent alcohol 93.5 0.45 1.6E-05 46.6 11.3 93 127-232 192-292 (373)
456 1yb1_A 17-beta-hydroxysteroid 93.5 0.4 1.4E-05 44.7 10.3 42 127-170 31-73 (272)
457 3nix_A Flavoprotein/dehydrogen 93.5 0.055 1.9E-06 53.5 4.5 33 128-162 6-38 (421)
458 1wma_A Carbonyl reductase [NAD 93.5 0.24 8.3E-06 45.5 8.7 42 126-169 3-46 (276)
459 2bi7_A UDP-galactopyranose mut 93.5 0.067 2.3E-06 53.1 5.1 34 127-162 3-36 (384)
460 1rjw_A ADH-HT, alcohol dehydro 93.5 0.24 8.3E-06 48.0 9.0 82 127-219 165-251 (339)
461 3s2e_A Zinc-containing alcohol 93.4 0.17 5.7E-06 49.1 7.8 82 127-219 167-253 (340)
462 3l77_A Short-chain alcohol deh 93.4 0.28 9.4E-06 44.5 8.8 42 127-170 2-44 (235)
463 3qiv_A Short-chain dehydrogena 93.4 0.3 1E-05 44.8 9.2 42 127-170 9-51 (253)
464 1ryi_A Glycine oxidase; flavop 93.4 0.059 2E-06 52.5 4.5 34 127-162 17-50 (382)
465 3c4a_A Probable tryptophan hyd 93.4 0.055 1.9E-06 53.2 4.3 34 128-163 1-36 (381)
466 1e3i_A Alcohol dehydrogenase, 93.4 0.32 1.1E-05 47.8 9.9 93 127-232 196-296 (376)
467 3i1j_A Oxidoreductase, short c 93.3 0.49 1.7E-05 43.1 10.5 42 127-170 14-56 (247)
468 2gf3_A MSOX, monomeric sarcosi 93.3 0.068 2.3E-06 52.1 4.8 34 127-162 3-36 (389)
469 3h8l_A NADH oxidase; membrane 93.3 0.066 2.2E-06 53.2 4.7 34 127-162 1-37 (409)
470 3ucx_A Short chain dehydrogena 93.3 0.42 1.4E-05 44.4 10.1 82 127-233 11-96 (264)
471 3alj_A 2-methyl-3-hydroxypyrid 93.3 0.07 2.4E-06 52.3 4.8 34 127-162 11-44 (379)
472 2zbw_A Thioredoxin reductase; 93.2 0.065 2.2E-06 51.2 4.4 34 127-162 5-38 (335)
473 1ek6_A UDP-galactose 4-epimera 93.2 0.11 3.7E-06 50.0 6.0 33 127-161 2-35 (348)
474 3oh8_A Nucleoside-diphosphate 93.2 0.033 1.1E-06 57.7 2.4 63 127-208 147-210 (516)
475 3urh_A Dihydrolipoyl dehydroge 93.2 0.066 2.3E-06 54.8 4.6 32 128-161 26-57 (491)
476 3st7_A Capsular polysaccharide 93.1 0.07 2.4E-06 52.1 4.6 31 128-160 1-33 (369)
477 3pk0_A Short-chain dehydrogena 93.1 0.45 1.6E-05 44.2 10.0 42 127-170 10-52 (262)
478 3fbs_A Oxidoreductase; structu 93.1 0.075 2.6E-06 49.5 4.6 33 127-161 2-34 (297)
479 1xg5_A ARPG836; short chain de 93.1 0.57 1.9E-05 43.7 10.7 41 127-169 32-73 (279)
480 1w6u_A 2,4-dienoyl-COA reducta 93.1 0.61 2.1E-05 43.9 11.0 41 127-169 26-67 (302)
481 2pnf_A 3-oxoacyl-[acyl-carrier 93.0 0.56 1.9E-05 42.5 10.4 41 127-169 7-48 (248)
482 4dry_A 3-oxoacyl-[acyl-carrier 93.0 0.35 1.2E-05 45.6 9.2 42 127-170 33-75 (281)
483 3rku_A Oxidoreductase YMR226C; 93.0 0.52 1.8E-05 44.6 10.4 84 127-233 33-123 (287)
484 4fs3_A Enoyl-[acyl-carrier-pro 93.0 0.35 1.2E-05 45.0 9.1 42 127-170 6-50 (256)
485 3nks_A Protoporphyrinogen oxid 93.0 0.077 2.6E-06 53.5 4.8 34 127-162 2-37 (477)
486 3nyw_A Putative oxidoreductase 93.0 0.42 1.4E-05 44.2 9.5 42 127-170 7-49 (250)
487 3cgv_A Geranylgeranyl reductas 93.0 0.059 2E-06 52.6 3.8 33 128-162 5-37 (397)
488 3dje_A Fructosyl amine: oxygen 93.0 0.079 2.7E-06 52.9 4.8 34 127-162 6-40 (438)
489 2z1n_A Dehydrogenase; reductas 92.9 0.9 3.1E-05 41.9 11.8 42 127-170 7-49 (260)
490 1y8q_B Anthracycline-, ubiquit 92.9 0.13 4.6E-06 54.7 6.6 35 127-162 17-51 (640)
491 2jhf_A Alcohol dehydrogenase E 92.9 0.46 1.6E-05 46.6 10.2 93 127-232 192-292 (374)
492 1tt5_A APPBP1, amyloid protein 92.9 0.29 9.9E-06 51.1 9.0 35 127-162 32-66 (531)
493 4ej6_A Putative zinc-binding d 92.9 0.35 1.2E-05 47.6 9.3 83 127-220 183-275 (370)
494 4ibo_A Gluconate dehydrogenase 92.8 0.26 8.9E-06 46.3 7.9 42 127-170 26-68 (271)
495 2jah_A Clavulanic acid dehydro 92.8 0.49 1.7E-05 43.5 9.7 42 127-170 7-49 (247)
496 3jyn_A Quinone oxidoreductase; 92.8 0.28 9.6E-06 47.2 8.3 91 127-232 141-238 (325)
497 3itj_A Thioredoxin reductase 1 92.8 0.067 2.3E-06 50.8 3.8 35 125-161 20-54 (338)
498 2fzw_A Alcohol dehydrogenase c 92.8 0.49 1.7E-05 46.3 10.1 93 127-232 191-291 (373)
499 4b4u_A Bifunctional protein fo 92.8 0.15 5.1E-06 49.3 6.1 72 126-232 178-250 (303)
500 2rhc_B Actinorhodin polyketide 92.8 0.59 2E-05 43.8 10.3 41 127-169 22-63 (277)
No 1
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=100.00 E-value=1.2e-54 Score=437.00 Aligned_cols=289 Identities=32% Similarity=0.523 Sum_probs=277.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEc
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIla 206 (420)
+|||+|||+|+||+++|..|+++| ++|++|+|++++++.+++.|.+.+|+|+..++.++.+++|++++++++|+||+|
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G--~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDvVila 106 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKG--QKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILIV 106 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTT--CCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTTCCEEEEC
T ss_pred CCeEEEECccHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhcCCEEEEC
Confidence 589999999999999999999998 999999999999999999998889999999999999999999999999999999
Q ss_pred cChhhHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCeEEEECcccHHHHhhcCCeEEEEecCCH
Q 014700 207 MPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVASKDR 286 (420)
Q Consensus 207 Vp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~~vl~GP~~a~ev~~g~~t~i~ia~~d~ 286 (420)
||+++++++++++.++++++++||+++||+++++ ..+++.+.+.++. .++++++||+++.++..+.++.+++++.+.
T Consensus 107 Vp~~~~~~vl~~i~~~l~~~~ivvs~~kGi~~~t-~~~se~i~~~l~~--~~~~vlsgP~~a~ev~~g~pt~~via~~~~ 183 (356)
T 3k96_A 107 VPSFAFHEVITRMKPLIDAKTRIAWGTKGLAKGS-RLLHEVVATELGQ--VPMAVISGPSLATEVAANLPTAVSLASNNS 183 (356)
T ss_dssp CCHHHHHHHHHHHGGGCCTTCEEEECCCSCBTTT-BCHHHHHHHHHCS--CCEEEEESSCCHHHHHTTCCEEEEEEESCH
T ss_pred CCHHHHHHHHHHHHHhcCCCCEEEEEeCCCCcCc-cCHHHHHHHHcCC--CCEEEEECccHHHHHHcCCCeEEEEecCCH
Confidence 9999999999999999999999999999999988 8899999998874 467899999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCceEEEcCChhHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHcCCChhhhhh
Q 014700 287 KLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGAKPATITG 366 (420)
Q Consensus 287 e~~~~l~~ll~~~g~~v~~s~Di~g~e~~~alkNv~Ai~~G~~~gl~lg~N~~~al~~~~~~E~~~lA~a~Gi~~~t~~~ 366 (420)
+..++++++|+..+++++.++|+.|++|++++||++++++|+++++++++|...++++++++|+.++++++|++++||++
T Consensus 184 ~~~~~v~~lf~~~~~rv~~~~Di~g~e~~galkNviaia~G~~~gl~~g~N~~aal~~~~l~E~~~l~~a~G~~~~t~~g 263 (356)
T 3k96_A 184 QFSKDLIERLHGQRFRVYKNDDMIGVELCGSVKNILAIATGISDGLKLGSNARAALITRGLTEMGRLVSVFGGKQETLTG 263 (356)
T ss_dssp HHHHHHHHHHCCSSEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTCCHHHHTS
T ss_pred HHHHHHHHHhCCCCeeEEEeCCHHHHHHHHHHHHHHHHHHHHHhhccCCchHHHHHHHHHHHHHHHHHHHhCCChHhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccchhhhhhcccCCCCccccccccCCCChHHHHHHcCCcccccchhhhhhcC
Q 014700 367 LSGTGDIMLTCFVNLSRNRTVGVRLGSGEKLDDILSSMNQVLVNPSMQPLLGKL 420 (420)
Q Consensus 367 l~g~gdl~~t~~~~~sRn~~~G~~l~~g~~~~~~~~~~~~~~eG~~t~~~~~~~ 420 (420)
++|+||+++||++.+||||++|+.|++|++++++++++++++||+.|++++++|
T Consensus 264 l~g~gDl~~tc~s~~sRN~~~G~~l~~g~~~~~~~~~~~~~~eG~~t~~~~~~l 317 (356)
T 3k96_A 264 LAGLGDLVLTCTDNQSRNRRFGLALGEGVDKKEAQQAIGQAIEGLYNTDQVHAL 317 (356)
T ss_dssp TTTHHHHHHHHHCTTCHHHHHHHHHHHTCCHHHHHHHHCSCCSHHHHHHHHHHH
T ss_pred cchhhHHHHhccCCCCccHHHHHHHHCCCCHHHHHHHcCCccchHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999874
No 2
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-55 Score=444.71 Aligned_cols=290 Identities=27% Similarity=0.379 Sum_probs=264.7
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCC------CeEEEEeCCHH-----HHHHHHHhcCCCCCCCCCCCCCceEEeCCHH
Q 014700 126 RTNKVVVLGGGSFGTAMAAHVANKKSQ------LKVYMLMRDPA-----VCQSINEKHCNCRYFPEQKLPENVIATTDAK 194 (420)
Q Consensus 126 ~~mkI~IIGaGamG~alA~~La~aG~~------~~V~l~~r~~~-----~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~ 194 (420)
+..||+|||+|+||+++|..|+++|++ ++|++|.|+++ ..+.|++.|.|.+|||++.||+++.+++|++
T Consensus 33 ~p~KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp~~i~~t~dl~ 112 (391)
T 4fgw_A 33 KPFKVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLPDNLVANPDLI 112 (391)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCCSSEEEESCHH
T ss_pred CCCeEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCCCCcEEeCCHH
Confidence 356999999999999999999998721 25999999865 4678999999999999999999999999999
Q ss_pred HhccCCcEEEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCCcch--hhhHHHHHHHHhCCCCCCeEEEECcccHHHHh
Q 014700 195 TALLGADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNT--LRMMSQIIPQALRNPRQPFIALSGPSFALELM 272 (420)
Q Consensus 195 eal~~aDiVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~~t--~~~~se~l~~~lg~~~~~~~vl~GP~~a~ev~ 272 (420)
++++++|+||++||++.++++++++.++++++.++|+++||++..+ ...+++++.+.++. ++++++||+|+.|++
T Consensus 113 ~al~~ad~ii~avPs~~~r~~l~~l~~~~~~~~~iv~~~KGie~~~~~~~~~se~i~e~~~~---~~~vLsGPs~A~EVa 189 (391)
T 4fgw_A 113 DSVKDVDIIVFNIPHQFLPRICSQLKGHVDSHVRAISCLKGFEVGAKGVQLLSSYITEELGI---QCGALSGANIATEVA 189 (391)
T ss_dssp HHHTTCSEEEECSCGGGHHHHHHHHTTTSCTTCEEEECCCSCEEETTEEECHHHHHHHHHCC---EEEEEECSCCHHHHH
T ss_pred HHHhcCCEEEEECChhhhHHHHHHhccccCCCceeEEeccccccccccchhHHHHHHHHhCc---cceeccCCchHHHhh
Confidence 9999999999999999999999999999999999999999998654 36789999998874 578999999999999
Q ss_pred hcCCeEEEEecCCHH---------HHHHHHHHHhcCCceEEEcCChhHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHH
Q 014700 273 NKLPTAMVVASKDRK---------LANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALV 343 (420)
Q Consensus 273 ~g~~t~i~ia~~d~e---------~~~~l~~ll~~~g~~v~~s~Di~g~e~~~alkNv~Ai~~G~~~gl~lg~N~~~al~ 343 (420)
++.|+.+++++.+.+ ..+.++++|.+.+|++|.++|++|+|+++++||++|+++|+++|+++|+|+.++++
T Consensus 190 ~~~pta~~iA~~~~~~~~~~~~~~~a~~~~~lf~~~~frvy~s~DviGvElgGAlKNViAIAaGi~dGlg~G~NakAALi 269 (391)
T 4fgw_A 190 QEHWSETTVAYHIPKDFRGEGKDVDHKVLKALFHRPYFHVSVIEDVAGISICGALKNVVALGCGFVEGLGWGNNASAAIQ 269 (391)
T ss_dssp TTCCEEEEEECCCCTTCCCSSSSCCHHHHHHHHCBTTEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cCCCceEEEEecChhhhhhhhHHHHHHHHHHHhCCCCEEEEEeCCccceehHHHHHHHHHHHHHHHhcCCCCCCHHHHHH
Confidence 999999999875432 35789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHc---CCChhhhhhccccchhhhhhcccCCCCccccccccC-CCChHHHHHHc--CCcccccchhhhh
Q 014700 344 AQGCSEIRWLATKM---GAKPATITGLSGTGDIMLTCFVNLSRNRTVGVRLGS-GEKLDDILSSM--NQVLVNPSMQPLL 417 (420)
Q Consensus 344 ~~~~~E~~~lA~a~---Gi~~~t~~~l~g~gdl~~t~~~~~sRn~~~G~~l~~-g~~~~~~~~~~--~~~~eG~~t~~~~ 417 (420)
+++++||.+|+.++ |.++.+|.+++|+|||++||++ ||||++|+.|++ |++++++++++ +|++||+.|++.+
T Consensus 270 trGl~Em~rlg~al~~~g~~~tt~~glaGlGDLi~Tc~s--SRNr~~G~~lg~~G~~~~~~~~~~~~g~v~EGv~ta~~v 347 (391)
T 4fgw_A 270 RVGLGEIIRFGQMFFPESREETYYQESAGVADLITTCAG--GRNVKVARLMATSGKDAWECEKELLNGQSAQGLITCKEV 347 (391)
T ss_dssp HHHHHHHHHHHHHHSTTCCHHHHHHSTTTHHHHHHHHHS--SHHHHHHHHHHHTCCCHHHHHHHHHTTCCCTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCCceeecCCCcccceeEEecC--CccHHHHHHHHhcCCCHHHHHHHHhCCCEEehHHHHHHH
Confidence 99999999999999 5556667799999999999998 999999999994 99999999998 8999999999999
Q ss_pred hcC
Q 014700 418 GKL 420 (420)
Q Consensus 418 ~~~ 420 (420)
++|
T Consensus 348 ~~l 350 (391)
T 4fgw_A 348 HEW 350 (391)
T ss_dssp HHH
T ss_pred HHH
Confidence 874
No 3
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=100.00 E-value=2.1e-39 Score=327.45 Aligned_cols=289 Identities=25% Similarity=0.396 Sum_probs=261.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcC-----CCCeEEEEeCCHH-----HHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHh
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKK-----SQLKVYMLMRDPA-----VCQSINEKHCNCRYFPEQKLPENVIATTDAKTA 196 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG-----~~~~V~l~~r~~~-----~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~ea 196 (420)
+|||+|||+|+||++||..|+++| ++++|++|+|+++ +++.+++.+.+..|+++..++.++.++++++++
T Consensus 21 ~~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ea 100 (375)
T 1yj8_A 21 PLKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSDLASV 100 (375)
T ss_dssp CBCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESSTHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECCHHHH
Confidence 579999999999999999999876 1168999999988 889999888888888888888888998999888
Q ss_pred ccCCcEEEEccChhhHHHHHHHhhh----cCCCCCeEEEeccCCCc--chhhhHHHHHHHHhCCCCCCeEEEECcccHHH
Q 014700 197 LLGADYCLHAMPVQFSSSFLEGISD----YVDPGLPFISLSKGLEL--NTLRMMSQIIPQALRNPRQPFIALSGPSFALE 270 (420)
Q Consensus 197 l~~aDiVIlaVp~~~l~~vl~~i~~----~l~~~~iVVs~snGi~~--~t~~~~se~l~~~lg~~~~~~~vl~GP~~a~e 270 (420)
++++|+||+|||+++++++++++.+ .++++++||+++||+.+ ++.+.+++.+.+.++ .++.++.||+++.+
T Consensus 101 ~~~aDvVilav~~~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~~~~~~~~~l~~~l~~~~~---~~~~v~~gp~~a~~ 177 (375)
T 1yj8_A 101 INDADLLIFIVPCQYLESVLASIKESESIKIASHAKAISLTKGFIVKKNQMKLCSNYISDFLN---IPCSALSGANIAMD 177 (375)
T ss_dssp HTTCSEEEECCCHHHHHHHHHHHTC---CCCCTTCEEEECCCSCEEETTEEECHHHHHHHHSS---SCEEEEECSCCHHH
T ss_pred HcCCCEEEEcCCHHHHHHHHHHHhhhhhccCCCCCEEEEeCCccccCCccccCHHHHHHHHcC---CCEEEEeCCchHHH
Confidence 8999999999999999999999998 89999999999999987 344567788877665 35778999999999
Q ss_pred HhhcCCeEEEEecCCHHHHHHHHHHHhcCCceEEEcCChhHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHH
Q 014700 271 LMNKLPTAMVVASKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEI 350 (420)
Q Consensus 271 v~~g~~t~i~ia~~d~e~~~~l~~ll~~~g~~v~~s~Di~g~e~~~alkNv~Ai~~G~~~gl~lg~N~~~al~~~~~~E~ 350 (420)
+..+.++.+++++.+.+..++++++|+..+++++.++|+.+++|++++||++++++|+..++++++|...+++.++++|+
T Consensus 178 v~~g~~~~~~~~~~~~~~~~~v~~ll~~~g~~~~~~~di~~~~~~k~l~N~~~~~~g~~~~~~~~~n~~~a~~~~~~~E~ 257 (375)
T 1yj8_A 178 VAMENFSEATIGGNDKDSLVIWQRVFDLPYFKINCVNETIEVEICGALKNIITLACGFCDGLNLPTNSKSAIIRNGINEM 257 (375)
T ss_dssp HHTTCCEEEEEECSCHHHHHHHHHHHCBTTEEEEEESCSHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHhCCCeEEEEecCCHHHHHHHHHHhCCCCeEEEEeCCcHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHH
Confidence 88888887778888888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHc--CCChhhhhhccccchhhhhhcccCCCCccccccccC-C--CChHHHHHHc--CCcccccchhhhhhcC
Q 014700 351 RWLATKM--GAKPATITGLSGTGDIMLTCFVNLSRNRTVGVRLGS-G--EKLDDILSSM--NQVLVNPSMQPLLGKL 420 (420)
Q Consensus 351 ~~lA~a~--Gi~~~t~~~l~g~gdl~~t~~~~~sRn~~~G~~l~~-g--~~~~~~~~~~--~~~~eG~~t~~~~~~~ 420 (420)
.++++++ |++++++++++|+||++.||.+ +||+.+|..+++ | .+++++.+++ ++..||..+++++.++
T Consensus 258 ~~la~a~G~G~~~~~~~~~~g~~dl~~t~~~--~~~~~~~~~~~~~g~~~~~~d~~~~~~~g~~~E~~~~~~~v~~~ 332 (375)
T 1yj8_A 258 ILFGKVFFQKFNENILLESCGFADIITSFLA--GRNAKCSAEFIKSTPKKTWEELENEILKGQKLQGTVTLKYVYHM 332 (375)
T ss_dssp HHHHHHHSSCCCGGGGGSTTTHHHHHHHHSS--SSHHHHHHHHHHHTTSSCHHHHHHHHHTTCCCHHHHHHHHHHHH
T ss_pred HHHHHHhccCCCcchhhccccccceeEeeeC--CccHHHHHHHHhcCCCCCHHHHHHhhcCCcEeeHHHHHHHHHHH
Confidence 9999999 6999999999999999999987 799999999988 8 7899998877 9999999999988753
No 4
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=100.00 E-value=1.3e-38 Score=320.28 Aligned_cols=289 Identities=34% Similarity=0.531 Sum_probs=257.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEc
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIla 206 (420)
||||+|||+|+||++||..|+++| ++|++|+|++++++.+++.+.+..++++..++.++.++++++++++++|+||+|
T Consensus 15 M~kI~iIG~G~mG~~la~~L~~~G--~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aDvVila 92 (366)
T 1evy_A 15 LNKAVVFGSGAFGTALAMVLSKKC--REVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFV 92 (366)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTTE--EEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTCSSEEEC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCC--CEEEEEECCHHHHHHHHHcCcccccccccccccceeeeCCHHHHHcCCCEEEEC
Confidence 349999999999999999999998 999999999999999998887777777777777888888998888999999999
Q ss_pred cChhhHHHHHHH----hhhcCCC-CCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCeEEEECcccHHHHhhcCCeEEEE
Q 014700 207 MPVQFSSSFLEG----ISDYVDP-GLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVV 281 (420)
Q Consensus 207 Vp~~~l~~vl~~----i~~~l~~-~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~~vl~GP~~a~ev~~g~~t~i~i 281 (420)
||++++++++++ +.+++++ +++||+++||+.+++.+.+.+.+.+.++. ....++.||+++.++..+.++.+++
T Consensus 93 v~~~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi~~~~~~~~~~~l~~~~~~--~~~~v~~gp~~~~~~~~g~~~~~~~ 170 (366)
T 1evy_A 93 IPTQFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGIERSTLKFPAEIIGEFLPS--PLLSVLAGPSFAIEVATGVFTCVSI 170 (366)
T ss_dssp CCHHHHHHHHHHHCHHHHHHHHHHTCCEEECCCSCCTTTCCCHHHHHTTTSCG--GGEEEEESSCCHHHHHTTCCEEEEE
T ss_pred CChHHHHHHHHHhHHHHHHhcCccCCEEEEECCcCCCccccCHHHHHHHHCCC--CcEEEEeCCChHHHHHhCCceEEEE
Confidence 999999999998 9888888 89999999999987666677777665553 2467899999999888888777777
Q ss_pred ecCCHHHHHHHHHHHhcC--CceEEEcCChhHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHcCC
Q 014700 282 ASKDRKLANAVQQLLASK--HLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGA 359 (420)
Q Consensus 282 a~~d~e~~~~l~~ll~~~--g~~v~~s~Di~g~e~~~alkNv~Ai~~G~~~gl~lg~N~~~al~~~~~~E~~~lA~a~Gi 359 (420)
++.+.+..++++++|+.. +++++.++|+.+.+|+++++|+++++.|+..++++++|...+++..+++|+.++++++|+
T Consensus 171 ~~~~~~~~~~v~~ll~~~g~g~~~~~~~di~~~~~~k~~~n~~~~~~~~~~~~~~~~n~~~~~~~~~~~E~~~la~a~Gi 250 (366)
T 1evy_A 171 ASADINVARRLQRIMSTGDRSFVCWATTDTVGCEVASAVKNVLAIGSGVANGLGMGLNARAALIMRGLLEIRDLTAALGG 250 (366)
T ss_dssp ECSSHHHHHHHHHHHSCTTSSEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ecCCHHHHHHHHHHhcCCCCeEEEEEcCCchHHHHHHHHHhHHHHHHHHHhhccCCccHHHHHHHHHHHHHHHHHHHhCC
Confidence 888888899999999999 999999999999999999999999999999999999999899999999999999999999
Q ss_pred ChhhhhhccccchhhhhhcccCCCCccccccccCCCChHHHHHHcCCcccccchhhhhhc
Q 014700 360 KPATITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGEKLDDILSSMNQVLVNPSMQPLLGK 419 (420)
Q Consensus 360 ~~~t~~~l~g~gdl~~t~~~~~sRn~~~G~~l~~g~~~~~~~~~~~~~~eG~~t~~~~~~ 419 (420)
+++++.++++.+|++.+|.+..+||+++|..+.+|++++++..+.+++.||.....++.+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~~~~v~~ 310 (366)
T 1evy_A 251 DGSAVFGLAGLGDLQLTCSSELSRNFTVGKKLGKGLPIEEIQRTSKAVAEGVATADPLMR 310 (366)
T ss_dssp CCTTTTSTTTHHHHHHHHTCTTSHHHHHHHHHHTTCCHHHHHC---CCCHHHHHHHHHHH
T ss_pred CCccccccccchhheeeecCCCCchHHHHHHHhCCCCHHHHHHHcCCeeehHHHHHHHHH
Confidence 999999999999999999988899999999999999999988888889999888877654
No 5
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=100.00 E-value=7.5e-38 Score=311.40 Aligned_cols=278 Identities=37% Similarity=0.513 Sum_probs=249.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEc
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIla 206 (420)
.|||+|||+|+||++||..|+++| ++|++|+|++++++.+++.|.+. |+++..+ ++.+++++++ ++++|+||+|
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G--~~V~~~~r~~~~~~~l~~~g~~~-~~~~~~~--~~~~~~~~~~-~~~aDvVil~ 87 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENG--EEVILWARRKEIVDLINVSHTSP-YVEESKI--TVRATNDLEE-IKKEDILVIA 87 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSHHHHHHHHHHSCBT-TBTTCCC--CSEEESCGGG-CCTTEEEEEC
T ss_pred CCcEEEECcCHHHHHHHHHHHhCC--CeEEEEeCCHHHHHHHHHhCCcc-cCCCCee--eEEEeCCHHH-hcCCCEEEEE
Confidence 589999999999999999999998 99999999999999999988666 6776655 5778888888 8899999999
Q ss_pred cChhhHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCeEEEECcccHHHHhhcCCeEEEEecCCH
Q 014700 207 MPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVASKDR 286 (420)
Q Consensus 207 Vp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~~vl~GP~~a~ev~~g~~t~i~ia~~d~ 286 (420)
||+++++++++++.+ ++++||+++||+++++.+.+++.+.+.++ ....++.+|+++.++..+.++.+++++.+
T Consensus 88 vk~~~~~~v~~~l~~---~~~~vv~~~nGi~~~~~~~l~~~~~~~~~---~~~~~~~~P~~~~~~~~g~~~~~~~g~~~- 160 (335)
T 1z82_A 88 IPVQYIREHLLRLPV---KPSMVLNLSKGIEIKTGKRVSEIVEEILG---CPYAVLSGPSHAEEVAKKLPTAVTLAGEN- 160 (335)
T ss_dssp SCGGGHHHHHTTCSS---CCSEEEECCCCCCTTTCCCHHHHHHHHTC---CCEEEEESSCCHHHHHTTCCEEEEEEETT-
T ss_pred CCHHHHHHHHHHhCc---CCCEEEEEeCCCCCCccCcHHHHHHHHcC---CceEEEECCccHHHHhCCCceEEEEEehh-
Confidence 999999999988876 68999999999998766778888877654 35688999999999888887766777655
Q ss_pred HHHHHHHHHHhcCCceEEEcCChhHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHcCCChhhhhh
Q 014700 287 KLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGAKPATITG 366 (420)
Q Consensus 287 e~~~~l~~ll~~~g~~v~~s~Di~g~e~~~alkNv~Ai~~G~~~gl~lg~N~~~al~~~~~~E~~~lA~a~Gi~~~t~~~ 366 (420)
.++++++|+..+++++.++|+.+.+|+|+++|+++++.|+..++++++|...+++..++.|+.++++++|++++++.+
T Consensus 161 --~~~~~~ll~~~g~~~~~~~di~~~~~~k~l~N~~~~~~g~~~g~~~~~n~~~a~~~~~~~E~~~la~a~G~~~~~~~~ 238 (335)
T 1z82_A 161 --SKELQKRISTEYFRVYTCEDVVGVEIAGALKNVIAIAAGILDGFGGWDNAKAALETRGIYEIARFGMFFGADQKTFMG 238 (335)
T ss_dssp --HHHHHHHHCCSSEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTCCHHHHTS
T ss_pred --HHHHHHHhCCCCEEEEecCchHHHHHHHHHHhHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHhCCChhhhcc
Confidence 789999999999999999999999999999999999999999999999998999999999999999999999999999
Q ss_pred ccccchhhhhhcccCCCCccccccccCCCChHHHHHHcCCcccccchhhhhhc
Q 014700 367 LSGTGDIMLTCFVNLSRNRTVGVRLGSGEKLDDILSSMNQVLVNPSMQPLLGK 419 (420)
Q Consensus 367 l~g~gdl~~t~~~~~sRn~~~G~~l~~g~~~~~~~~~~~~~~eG~~t~~~~~~ 419 (420)
+++.+|++.+|.+..+||+++|..+.+|++++++.++.++++||....+++.+
T Consensus 239 l~~~~~~~~t~~s~~~~n~~~~~~~~~g~~~~~~~~~~g~~~e~~~~~~~v~~ 291 (335)
T 1z82_A 239 LAGIGDLMVTCNSRYSRNRRFGELIARGFNPLKLLESSNQVVEGAFTVKAVMK 291 (335)
T ss_dssp TTTHHHHHHHHHCTTCHHHHHHHHHHHTCCHHHHHHTCSSCCTHHHHHHHHHH
T ss_pred cccccceeeeccCccCcHHHHHHHHhCCCCHHHHHHhcCCeeeHHHHHHHHHH
Confidence 99999999999998899999999999999999998889999999998877754
No 6
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=100.00 E-value=1.4e-37 Score=310.71 Aligned_cols=288 Identities=30% Similarity=0.482 Sum_probs=256.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCC-----CCeEEEEeCCHH-----HHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHh
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKS-----QLKVYMLMRDPA-----VCQSINEKHCNCRYFPEQKLPENVIATTDAKTA 196 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~-----~~~V~l~~r~~~-----~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~ea 196 (420)
+|||+|||+|+||+++|..|+++|. +++|++|+|+++ +.+.+++.+.+..++++..++.++.++++++++
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDVVQA 87 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEESSHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEcCHHHH
Confidence 4799999999999999999998751 168999999988 888998877777777777777788888899888
Q ss_pred ccCCcEEEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCCc--chhhhHHHHHHHHhCCCCCCeEEEECcccHHHHhhc
Q 014700 197 LLGADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLEL--NTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNK 274 (420)
Q Consensus 197 l~~aDiVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~--~t~~~~se~l~~~lg~~~~~~~vl~GP~~a~ev~~g 274 (420)
++++|+||+|||++.++++++++.++++++++||+++||+.. ++.+.+.+.+.+.++ .+..++.||+++.++..+
T Consensus 88 ~~~aD~Vilav~~~~~~~v~~~i~~~l~~~~ivv~~~~Gi~~~~~~~~~l~~~l~~~~~---~~~~v~~gp~~a~~v~~g 164 (354)
T 1x0v_A 88 AEDADILIFVVPHQFIGKICDQLKGHLKANATGISLIKGVDEGPNGLKLISEVIGERLG---IPMSVLMGANIASEVADE 164 (354)
T ss_dssp HTTCSEEEECCCGGGHHHHHHHHTTCSCTTCEEEECCCCBCSSSSSCCBHHHHHHHHHT---CCEEEEECSCCHHHHHTT
T ss_pred HcCCCEEEEeCCHHHHHHHHHHHHhhCCCCCEEEEECCccCCCCCccccHHHHHHHHcC---CCEEEEECCCcHHHHHhc
Confidence 899999999999999999999999999999999999999984 444567777777665 357789999999988888
Q ss_pred CCeEEEEecCCHHHHHHHHHHHhcCCceEEEcCChhHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHH
Q 014700 275 LPTAMVVASKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLA 354 (420)
Q Consensus 275 ~~t~i~ia~~d~e~~~~l~~ll~~~g~~v~~s~Di~g~e~~~alkNv~Ai~~G~~~gl~lg~N~~~al~~~~~~E~~~lA 354 (420)
.++.+++++.+.+..++++++|+..+++++.++|+.+.+|+++++|+++++.|+..++++++|...+++.++++|+.++|
T Consensus 165 ~~~~~~~~~~~~~~~~~v~~ll~~~g~~~~~~~di~~~~~~k~~~N~~~~~~g~~~~~~~~~n~~~~~~~~~~~E~~~la 244 (354)
T 1x0v_A 165 KFCETTIGCKDPAQGQLLKELMQTPNFRITVVQEVDTVEICGALKNVVAVGAGFCDGLGFGDNTKAAVIRLGLMEMIAFA 244 (354)
T ss_dssp CCEEEEEECSSHHHHHHHHHHHCBTTEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEECCHHHHHHHHHHhCCCCEEEEEcCCchHhHHHHHHHHHHHHHHHHHHHccCCccHHHHHHHHHHHHHHHHH
Confidence 87777788888889999999999999999999999999999999999999999999999999998899999999999999
Q ss_pred HHcCC---ChhhhhhccccchhhhhhcccCCCCccccccccC-CCChHHHHHHc--CCcccccchhhhhhc
Q 014700 355 TKMGA---KPATITGLSGTGDIMLTCFVNLSRNRTVGVRLGS-GEKLDDILSSM--NQVLVNPSMQPLLGK 419 (420)
Q Consensus 355 ~a~Gi---~~~t~~~l~g~gdl~~t~~~~~sRn~~~G~~l~~-g~~~~~~~~~~--~~~~eG~~t~~~~~~ 419 (420)
+++|+ +++++++++|++|++.+|.+ +||+++|..+.+ |++++++.+++ ++..||...+.++.+
T Consensus 245 ~a~G~~~~~~~~~~~~~g~~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~E~~~~~g~v~~ 313 (354)
T 1x0v_A 245 KLFCSGPVSSATFLESCGVADLITTCYG--GRNRKVAEAFARTGKSIEQLEKELLNGQKLQGPETARELYS 313 (354)
T ss_dssp HHHSSSCCCGGGGGSTTTHHHHHHHHHH--CHHHHHHHHHHHHCCCHHHHHHHHSTTCCCHHHHHHHHHHH
T ss_pred HHhcCCCCCcccccccchHHHHHHhhcc--cccHHHHHHHHhcCCCHHHHHHhhcCCcEeehHHHHHHHHH
Confidence 99999 99999999999999999986 899999999887 89999998876 899999999988765
No 7
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=100.00 E-value=1.5e-33 Score=278.66 Aligned_cols=283 Identities=23% Similarity=0.329 Sum_probs=240.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeC--CHHHHHHHHHhcCCCCCCCCCCCCCceEEeC--CHHHhccCCcEE
Q 014700 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMR--DPAVCQSINEKHCNCRYFPEQKLPENVIATT--DAKTALLGADYC 203 (420)
Q Consensus 128 mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r--~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~t--d~~eal~~aDiV 203 (420)
|||+|||+|+||+++|..|+++| ++|++|+| ++++++.+++.+.+..+ +..+ .++.+++ +++++++++|+|
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~--g~~~-~~~~~~~~~~~~~~~~~~D~v 75 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNG--NEVRIWGTEFDTEILKSISAGREHPRL--GVKL-NGVEIFWPEQLEKCLENAEVV 75 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHC--CEEEEECCGGGHHHHHHHHTTCCBTTT--TBCC-CSEEEECGGGHHHHHTTCSEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCC--CeEEEEEccCCHHHHHHHHHhCcCccc--Cccc-cceEEecHHhHHHHHhcCCEE
Confidence 69999999999999999999998 89999999 99999999887654333 2223 4456776 787888999999
Q ss_pred EEccChhhHHHHHHHhhhcCCCCCeEEEeccCC---CcchhhhHHHHHHHHhCCCCCCeEEEECcccHHHHhhcCCeEEE
Q 014700 204 LHAMPVQFSSSFLEGISDYVDPGLPFISLSKGL---ELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMV 280 (420)
Q Consensus 204 IlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi---~~~t~~~~se~l~~~lg~~~~~~~vl~GP~~a~ev~~g~~t~i~ 280 (420)
|+|||++.++++++++.+ ++++++||+++||+ .+++.+.+.+.+.+.+|.. ....++.||+++.+...+.++.++
T Consensus 76 i~~v~~~~~~~v~~~i~~-l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~~~g~~-~~~~~~~~p~~~~~~~~g~~~~~~ 153 (335)
T 1txg_A 76 LLGVSTDGVLPVMSRILP-YLKDQYIVLISKGLIDFDNSVLTVPEAVWRLKHDLR-ERTVAITGPAIAREVAKRMPTTVV 153 (335)
T ss_dssp EECSCGGGHHHHHHHHTT-TCCSCEEEECCCSEEEETTEEEEHHHHHHTTSTTCG-GGEEEEESSCCHHHHHTTCCEEEE
T ss_pred EEcCChHHHHHHHHHHhc-CCCCCEEEEEcCcCccCCCCcCccHHHHHHHhcCCC-CcEEEEECCCcHHHHHccCCcEEE
Confidence 999999999999999999 98899999999999 6554456666665543421 246788999999888777777777
Q ss_pred EecCCHHHHHHHHHHHhcCCceEEEcCChhHHHHHHHHHHHHHHHHHHHHhcccc-----hhHHHHHHHHHHHHHHHHHH
Q 014700 281 VASKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLG-----NNSMAALVAQGCSEIRWLAT 355 (420)
Q Consensus 281 ia~~d~e~~~~l~~ll~~~g~~v~~s~Di~g~e~~~alkNv~Ai~~G~~~gl~lg-----~N~~~al~~~~~~E~~~lA~ 355 (420)
+++.+.+..+.++++|+..+++++..+|+.+.+|.|+++|+..++.|+..+++++ +|...+++..+++|+.++++
T Consensus 154 ~~~~~~~~~~~~~~ll~~~g~~~~~~~di~~~~~~k~~~N~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~E~~~la~ 233 (335)
T 1txg_A 154 FSSPSESSANKMKEIFETEYFGVEVTTDIIGTEITSALKNVYSIAIAWIRGYESRKNVEMSNAKGVIATRAINEMAELIE 233 (335)
T ss_dssp EECSCHHHHHHHHHHHCBTTEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCHHHHHHHHHHhCCCcEEEEecCchHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 8887888899999999999999999999999999999999999999999888888 88888999999999999999
Q ss_pred HcCCChhhhhhccccchhhhhhcccCCCCccccccccCCCChHHHHHHcC----Ccccccchhhhhhc
Q 014700 356 KMGAKPATITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGEKLDDILSSMN----QVLVNPSMQPLLGK 419 (420)
Q Consensus 356 a~Gi~~~t~~~l~g~gdl~~t~~~~~sRn~~~G~~l~~g~~~~~~~~~~~----~~~eG~~t~~~~~~ 419 (420)
++|+++++++++++++|++.+|.+ +||+.+|..++.|.+..+.+++++ ...|+.....++.+
T Consensus 234 ~~G~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~s~~~d~~~~~~~~~~~~E~~~~~~~~~~ 299 (335)
T 1txg_A 234 ILGGDRETAFGLSGFGDLIATFRG--GRNGMLGELLGKGLSIDEAMEELERRGVGVVEGYKTAEKAYR 299 (335)
T ss_dssp HHTSCGGGGGSTTTHHHHHHTTTC--HHHHHHHHHHHTTCCHHHHHHHHHHTTCCCCHHHHHHHHHHH
T ss_pred HHCCCcchhhcccchhheeecccc--CccHHHHHHHhCCCCHHHHHHHhccCCceecchHHHHHHHHH
Confidence 999999999999999999998876 788888888888888887776656 77888887776654
No 8
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=99.95 E-value=7.9e-28 Score=237.86 Aligned_cols=229 Identities=17% Similarity=0.200 Sum_probs=180.9
Q ss_pred hhhcCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCc
Q 014700 122 DILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGAD 201 (420)
Q Consensus 122 ~~~~~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aD 201 (420)
+.+..+|||+|||+|+||+++|..|+++| ++|++| ++++.++.+++.|.+.. .++..++.++.+++++++ +.++|
T Consensus 14 ~~~~~~~kI~IiGaGa~G~~~a~~L~~~G--~~V~l~-~~~~~~~~i~~~g~~~~-~~~~~~~~~~~~~~~~~~-~~~~D 88 (318)
T 3hwr_A 14 NLYFQGMKVAIMGAGAVGCYYGGMLARAG--HEVILI-ARPQHVQAIEATGLRLE-TQSFDEQVKVSASSDPSA-VQGAD 88 (318)
T ss_dssp ------CEEEEESCSHHHHHHHHHHHHTT--CEEEEE-CCHHHHHHHHHHCEEEE-CSSCEEEECCEEESCGGG-GTTCS
T ss_pred hhhccCCcEEEECcCHHHHHHHHHHHHCC--CeEEEE-EcHhHHHHHHhCCeEEE-cCCCcEEEeeeeeCCHHH-cCCCC
Confidence 44556789999999999999999999998 999999 99999999998886554 345555556777888765 68999
Q ss_pred EEEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHH-HHHhCCCCCCeEEEECcccHHHHhhcCCeEEE
Q 014700 202 YCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQII-PQALRNPRQPFIALSGPSFALELMNKLPTAMV 280 (420)
Q Consensus 202 iVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l-~~~lg~~~~~~~vl~GP~~a~ev~~g~~t~i~ 280 (420)
+||+|||+++++++++++.++++++++||+++||++.+ +.+.+.+ .+.++......+++.||+++.+...+. +.
T Consensus 89 ~vilavk~~~~~~~l~~l~~~l~~~~~iv~~~nGi~~~--~~l~~~~~~~vl~g~~~~~a~~~gP~~~~~~~~g~---~~ 163 (318)
T 3hwr_A 89 LVLFCVKSTDTQSAALAMKPALAKSALVLSLQNGVENA--DTLRSLLEQEVAAAVVYVATEMAGPGHVRHHGRGE---LV 163 (318)
T ss_dssp EEEECCCGGGHHHHHHHHTTTSCTTCEEEEECSSSSHH--HHHHHHCCSEEEEEEEEEEEEEEETTEEEEEEEEE---EE
T ss_pred EEEEEcccccHHHHHHHHHHhcCCCCEEEEeCCCCCcH--HHHHHHcCCcEEEEEEEEeEEEcCCeEEEEcCCce---EE
Confidence 99999999999999999999999999999999999874 2333443 222221111235678999988766553 33
Q ss_pred EecCCHHHHHHHHHHHhcCCceEEEcCChhHHHHHHHHHHHHHHHHHHHHhcccchh----HHHHHHHHHHHHHHHHHHH
Q 014700 281 VASKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNN----SMAALVAQGCSEIRWLATK 356 (420)
Q Consensus 281 ia~~d~e~~~~l~~ll~~~g~~v~~s~Di~g~e~~~alkNv~Ai~~G~~~gl~lg~N----~~~al~~~~~~E~~~lA~a 356 (420)
+++ .+..+.++++|+..+++++.++|+.+.+|.|+++|+..++.+...+.++|.. ....++.+++.|+.+++++
T Consensus 164 ig~--~~~~~~l~~~l~~~~~~~~~~~Di~~~~w~Kl~~N~~~n~l~al~~~~~g~l~~~~~~~~l~~~~~~E~~~va~a 241 (318)
T 3hwr_A 164 IEP--TSHGANLAAIFAAAGVPVETSDNVRGALWAKLILNCAYNALSAITQLPYGRLVRGEGVEAVMRDVMEECFAVARA 241 (318)
T ss_dssp ECC--CTTTHHHHHHHHHTTCCEEECSCHHHHHHHHHHHHHHHHHHHHHHTCCHHHHTTSTTHHHHHHHHHHHHHHHHHH
T ss_pred EcC--CHHHHHHHHHHHhCCCCcEechHHHHHHHHHHHHHhhhhHHHHHHCCCHHHHhcChhHHHHHHHHHHHHHHHHHH
Confidence 555 3456889999999999999999999999999999999898888888876643 3468899999999999999
Q ss_pred cCCChh
Q 014700 357 MGAKPA 362 (420)
Q Consensus 357 ~Gi~~~ 362 (420)
+|++.+
T Consensus 242 ~G~~l~ 247 (318)
T 3hwr_A 242 EGVKLP 247 (318)
T ss_dssp TTCCCC
T ss_pred cCCCCC
Confidence 999743
No 9
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=99.95 E-value=1.7e-27 Score=234.62 Aligned_cols=250 Identities=16% Similarity=0.169 Sum_probs=185.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCC-CCCCCCCceEEeCCHHHhccCCcEEEE
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYF-PEQKLPENVIATTDAKTALLGADYCLH 205 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l-~~~~l~~~i~a~td~~eal~~aDiVIl 205 (420)
+|||+|||+|+||+++|..|+++| ++|++|+|++ .+.+++.|.+..+. +++.++ ++.+++++++ +.++|+||+
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~g--~~V~~~~r~~--~~~i~~~g~~~~~~~g~~~~~-~~~~~~~~~~-~~~~D~vil 75 (312)
T 3hn2_A 2 SLRIAIVGAGALGLYYGALLQRSG--EDVHFLLRRD--YEAIAGNGLKVFSINGDFTLP-HVKGYRAPEE-IGPMDLVLV 75 (312)
T ss_dssp --CEEEECCSTTHHHHHHHHHHTS--CCEEEECSTT--HHHHHHTCEEEEETTCCEEES-CCCEESCHHH-HCCCSEEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHHCC--CeEEEEEcCc--HHHHHhCCCEEEcCCCeEEEe-eceeecCHHH-cCCCCEEEE
Confidence 479999999999999999999998 8999999986 37888877654432 223332 4556778766 689999999
Q ss_pred ccChhhHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCC------CCeEEEECcccHHHHhhcCCeEE
Q 014700 206 AMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPR------QPFIALSGPSFALELMNKLPTAM 279 (420)
Q Consensus 206 aVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~------~~~~vl~GP~~a~ev~~g~~t~i 279 (420)
|||+++++++++++.++++++++||+++||++.. +.+.+.++... ...+.+.||+++.+... ..+
T Consensus 76 avk~~~~~~~l~~l~~~l~~~~~iv~l~nGi~~~------~~l~~~~~~~~v~~~~~~~~a~~~~p~~v~~~~~---g~~ 146 (312)
T 3hn2_A 76 GLKTFANSRYEELIRPLVEEGTQILTLQNGLGNE------EALATLFGAERIIGGVAFLCSNRGEPGEVHHLGA---GRI 146 (312)
T ss_dssp CCCGGGGGGHHHHHGGGCCTTCEEEECCSSSSHH------HHHHHHTCGGGEEEEEEEEECCBCSSSEEEECEE---EEE
T ss_pred ecCCCCcHHHHHHHHhhcCCCCEEEEecCCCCcH------HHHHHHCCCCcEEEEEEEeeeEEcCCcEEEECCC---CeE
Confidence 9999999999999999999999999999999854 23444444210 01123456887765432 345
Q ss_pred EEec---CCHHHHHHHHHHHhcCCceEEEcCChhHHHHHHHHHHHHHHHHHHHHhcccc----hhHHHHHHHHHHHHHHH
Q 014700 280 VVAS---KDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLG----NNSMAALVAQGCSEIRW 352 (420)
Q Consensus 280 ~ia~---~d~e~~~~l~~ll~~~g~~v~~s~Di~g~e~~~alkNv~Ai~~G~~~gl~lg----~N~~~al~~~~~~E~~~ 352 (420)
.++. .+.+..+.++++|+..+++++.++|+.+.+|.|+++|+..++.+...+..+| ++....++.+++.|+.+
T Consensus 147 ~ig~~~~~~~~~~~~l~~~l~~~g~~~~~~~di~~~~w~Kl~~N~~~n~l~al~~~~~G~l~~~~~~~~l~~~~~~E~~~ 226 (312)
T 3hn2_A 147 ILGEFLPRDTGRIEELAAMFRQAGVDCRTTDDLKRARWEKLVWNIPFNGLCALLQQPVNLILARDVSRKLVRGIMLEVIA 226 (312)
T ss_dssp EEEESSCCCSHHHHHHHHHHHHTTCCEEECSCHHHHHHHHHHHHHHHHHHHHHHTCCHHHHTTSHHHHHHHHHHHHHHHH
T ss_pred EEecCCCCccHHHHHHHHHHHhCCCCcEEChHHHHHHHHHHHHHHhHHHHHHHHCCCHHHHHhChhHHHHHHHHHHHHHH
Confidence 5654 2457789999999999999999999999999999999988888877777666 45678999999999999
Q ss_pred HHHHcC--CChhhhhhccccchhhhhhcccCCCCcc-ccccccCCCC
Q 014700 353 LATKMG--AKPATITGLSGTGDIMLTCFVNLSRNRT-VGVRLGSGEK 396 (420)
Q Consensus 353 lA~a~G--i~~~t~~~l~g~gdl~~t~~~~~sRn~~-~G~~l~~g~~ 396 (420)
+++++| ++.+ ....+.+.++....++|++ .-..+.+|+.
T Consensus 227 va~a~G~~~~~~-----~~~~~~~~~~~~~~~~~~sSM~qD~~~gr~ 268 (312)
T 3hn2_A 227 GANAQGLATFIA-----DGYVDDMLEFTDAMGEYKPSMEIDREEGRP 268 (312)
T ss_dssp HHHTSCCSSCCC-----TTHHHHHHHHHTTSCSCCCHHHHHHHTTCC
T ss_pred HHHHcCCccCCC-----HHHHHHHHHHHhcCCCCCchHHHHHHhCCC
Confidence 999999 7653 2344555555444455532 2233445544
No 10
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=99.94 E-value=2.2e-26 Score=227.41 Aligned_cols=220 Identities=15% Similarity=0.180 Sum_probs=169.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCC--CCCCCCCCCceEEeCCHHHhccCCcEEE
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCR--YFPEQKLPENVIATTDAKTALLGADYCL 204 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~--~l~~~~l~~~i~a~td~~eal~~aDiVI 204 (420)
.|||+|||+|+||+++|..|+++| ++|++|+|++ .+.+++.|+... +.+++.++ ++.++++++++.+++|+||
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~g--~~V~~~~r~~--~~~i~~~Gl~~~~~~~g~~~~~-~~~~~~~~~~~~~~~DlVi 76 (320)
T 3i83_A 2 SLNILVIGTGAIGSFYGALLAKTG--HCVSVVSRSD--YETVKAKGIRIRSATLGDYTFR-PAAVVRSAAELETKPDCTL 76 (320)
T ss_dssp -CEEEEESCCHHHHHHHHHHHHTT--CEEEEECSTT--HHHHHHHCEEEEETTTCCEEEC-CSCEESCGGGCSSCCSEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHhCC--CeEEEEeCCh--HHHHHhCCcEEeecCCCcEEEe-eeeeECCHHHcCCCCCEEE
Confidence 479999999999999999999998 9999999987 378888765322 44555443 4566778877656899999
Q ss_pred EccChhhHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCeEEEECcccH-------HHHhhcCCe
Q 014700 205 HAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFA-------LELMNKLPT 277 (420)
Q Consensus 205 laVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~~vl~GP~~a-------~ev~~g~~t 277 (420)
+|||+++++++++++.++++++++||+++||++.. +.+.+.++.. .++.|+.+. .++....+.
T Consensus 77 lavK~~~~~~~l~~l~~~l~~~t~Iv~~~nGi~~~------~~l~~~~~~~----~vl~g~~~~~a~~~~pg~v~~~~~~ 146 (320)
T 3i83_A 77 LCIKVVEGADRVGLLRDAVAPDTGIVLISNGIDIE------PEVAAAFPDN----EVISGLAFIGVTRTAPGEIWHQAYG 146 (320)
T ss_dssp ECCCCCTTCCHHHHHTTSCCTTCEEEEECSSSSCS------HHHHHHSTTS----CEEEEEEEEEEEEEETTEEEEEEEE
T ss_pred EecCCCChHHHHHHHHhhcCCCCEEEEeCCCCChH------HHHHHHCCCC----cEEEEEEEeceEEcCCCEEEECCCC
Confidence 99999999999999999999999999999999864 3455666542 244454443 222223344
Q ss_pred EEEEec---CCHHHHHHHHHHHhcCCceEEEcCChhHHHHHHHHHHHHHHHHHHHHhcccc----hhHHHHHHHHHHHHH
Q 014700 278 AMVVAS---KDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLG----NNSMAALVAQGCSEI 350 (420)
Q Consensus 278 ~i~ia~---~d~e~~~~l~~ll~~~g~~v~~s~Di~g~e~~~alkNv~Ai~~G~~~gl~lg----~N~~~al~~~~~~E~ 350 (420)
.+.++. .+.+.++.++++|+..+++++.++|+.+.+|.|+++|+..+......+...+ ++. ..++.+++.|+
T Consensus 147 ~~~ig~~~~~~~~~~~~l~~~l~~~~~~~~~~~di~~~~w~Kl~~N~~~N~ltal~~~~~g~~~~~~~-~~l~~~~~~E~ 225 (320)
T 3i83_A 147 RLMLGNYPGGVSERVKTLAAAFEEAGIDGIATENITTARWQKCVWNAAFNPLSVLSGGLDTLDILSTQ-EGFVRAIMQEI 225 (320)
T ss_dssp EEEEEESSSCCCHHHHHHHHHHHHTTSCEEECSCHHHHHHHHHHHHHHHHHHHHHTTSCCHHHHHHHC-HHHHHHHHHHH
T ss_pred EEEEecCCCCccHHHHHHHHHHHhCCCCceECHHHHHHHHHHHHHHHhhhHHHHHHCCCHHHHHhCcH-HHHHHHHHHHH
Confidence 556653 4457789999999999999999999999999999999755555544444333 333 78999999999
Q ss_pred HHHHHHcCCChh
Q 014700 351 RWLATKMGAKPA 362 (420)
Q Consensus 351 ~~lA~a~Gi~~~ 362 (420)
.++++++|++.+
T Consensus 226 ~~va~a~G~~l~ 237 (320)
T 3i83_A 226 RAVAAANGHPLP 237 (320)
T ss_dssp HHHHHHTTCCCC
T ss_pred HHHHHHcCCCCC
Confidence 999999999854
No 11
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=99.93 E-value=2.4e-26 Score=228.57 Aligned_cols=229 Identities=16% Similarity=0.166 Sum_probs=175.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEc
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIla 206 (420)
+|||+|||+|+||+++|..|+++| ++|++|+|+ +..+.+++.|.+... ++..++.++.+++++++ +.++|+||+|
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g--~~V~~~~r~-~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~-~~~~D~Vila 77 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAG--EAINVLARG-ATLQALQTAGLRLTE-DGATHTLPVRATHDAAA-LGEQDVVIVA 77 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTT--CCEEEECCH-HHHHHHHHTCEEEEE-TTEEEEECCEEESCHHH-HCCCSEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCC--CEEEEEECh-HHHHHHHHCCCEEec-CCCeEEEeeeEECCHHH-cCCCCEEEEe
Confidence 589999999999999999999998 899999996 678888887765432 33333445677788877 5899999999
Q ss_pred cChhhHHHHHHHhhhcCCCCCeEEEeccCCC--------cchhhh-----HHHHHHHHhCCCC------CCeEEEECccc
Q 014700 207 MPVQFSSSFLEGISDYVDPGLPFISLSKGLE--------LNTLRM-----MSQIIPQALRNPR------QPFIALSGPSF 267 (420)
Q Consensus 207 Vp~~~l~~vl~~i~~~l~~~~iVVs~snGi~--------~~t~~~-----~se~l~~~lg~~~------~~~~vl~GP~~ 267 (420)
||+++++++++++.++++++++||+++||++ +.+... ..+.+.+.++... ...+.+.+|++
T Consensus 78 vk~~~~~~~~~~l~~~l~~~~~iv~~~nGi~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~v~~gv~~~~a~~~~pg~ 157 (335)
T 3ghy_A 78 VKAPALESVAAGIAPLIGPGTCVVVAMNGVPWWFFDRPGPLQGQRLQAVDPHGRIAQAIPTRHVLGCVVHLTCATVSPGH 157 (335)
T ss_dssp CCHHHHHHHHGGGSSSCCTTCEEEECCSSSCTTTTCSSSTTTTCCCTTTCTTSHHHHHSCGGGEEEEEECCCEEESSTTE
T ss_pred CCchhHHHHHHHHHhhCCCCCEEEEECCCCccccccccccccccccccCCcHHHHHHhcCcccEEEEEEEEEEEEcCCcE
Confidence 9999999999999999999999999999974 111111 1124445544311 11245678888
Q ss_pred HHHHhhcCCeEEEEec---CCHHHHHHHHHHHhcCCceEEEcCChhHHHHHHHHH----HHHHHHHHHHHhcccchhHHH
Q 014700 268 ALELMNKLPTAMVVAS---KDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALK----NVLAIAAGIVVGMNLGNNSMA 340 (420)
Q Consensus 268 a~ev~~g~~t~i~ia~---~d~e~~~~l~~ll~~~g~~v~~s~Di~g~e~~~alk----Nv~Ai~~G~~~gl~lg~N~~~ 340 (420)
+.+...+ .+.++. .+.+.++.++++|+..+++++.++|+.+..|.|++. |++++..|+..+..++++...
T Consensus 158 v~~~~~g---~~~iG~~~~~~~~~~~~l~~~l~~~g~~~~~~~di~~~~w~Kl~~na~~N~l~al~~~~~g~~~~~~~~~ 234 (335)
T 3ghy_A 158 IRHGNGR---RLILGEPAGGASPRLASIAALFGRAGLQAECSEAIQRDIWFKLWGNMTMNPVSVLTGATCDRILDDPLVS 234 (335)
T ss_dssp EEECSCC---EEEEECTTCSCCHHHHHHHHHHHHTTCEEEECSCHHHHHHHHHHTTTTHHHHHHHHCCCHHHHHHSHHHH
T ss_pred EEECCCC---eEEEecCCCCcCHHHHHHHHHHHhCCCCcEeCchHHHHHHHHHHHHhhhhHHHHHhCCChHHHhcChHHH
Confidence 7654322 345553 345778999999999999999999999999998764 566677776666666778888
Q ss_pred HHHHHHHHHHHHHHHHcCCChhh
Q 014700 341 ALVAQGCSEIRWLATKMGAKPAT 363 (420)
Q Consensus 341 al~~~~~~E~~~lA~a~Gi~~~t 363 (420)
+++.++++|+.++++++|++++.
T Consensus 235 ~l~~~~~~E~~~va~a~G~~~~~ 257 (335)
T 3ghy_A 235 AFCLAVMAEAKAIGARIGCPIEQ 257 (335)
T ss_dssp HHHHHHHHHHHHHHHTTTCCCCS
T ss_pred HHHHHHHHHHHHHHHHcCCCCCc
Confidence 99999999999999999998643
No 12
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=99.93 E-value=1.5e-25 Score=218.70 Aligned_cols=256 Identities=15% Similarity=0.094 Sum_probs=181.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhc---cCCcEE
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL---LGADYC 203 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal---~~aDiV 203 (420)
||||+|||+|+||+++|..|+++| ++|++|+|++++++.+++.|....+.++ .++.++.+++ .+++. +++|+|
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g--~~V~~~~r~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~d~v 78 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIMLHQGG--NDVTLIDQWPAHIEAIRKNGLIADFNGE-EVVANLPIFS-PEEIDHQNEQVDLI 78 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHHHCEEEEETTE-EEEECCCEEC-GGGCCTTSCCCSEE
T ss_pred CCeEEEECcCHHHHHHHHHHHhCC--CcEEEEECCHHHHHHHHhCCEEEEeCCC-eeEecceeec-chhhcccCCCCCEE
Confidence 689999999999999999999998 8999999999999999887644322211 1111233333 23333 389999
Q ss_pred EEccChhhHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCC------CCCeEEEECcccHHHHhhcCCe
Q 014700 204 LHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNP------RQPFIALSGPSFALELMNKLPT 277 (420)
Q Consensus 204 IlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~------~~~~~vl~GP~~a~ev~~g~~t 277 (420)
|+|||++.++++++++.++++++++||+++||+... +.+.+.++.. ....+.+.||+.+.+...+...
T Consensus 79 i~~v~~~~~~~v~~~l~~~l~~~~~iv~~~~g~~~~------~~l~~~~~~~~vi~g~~~~~~~~~~p~~~~~~~~g~~~ 152 (316)
T 2ew2_A 79 IALTKAQQLDAMFKAIQPMITEKTYVLCLLNGLGHE------DVLEKYVPKENILVGITMWTAGLEGPGRVKLLGDGEIE 152 (316)
T ss_dssp EECSCHHHHHHHHHHHGGGCCTTCEEEECCSSSCTH------HHHTTTSCGGGEEEEEECCCCEEEETTEEEECSCCCEE
T ss_pred EEEeccccHHHHHHHHHHhcCCCCEEEEecCCCCcH------HHHHHHcCCccEEEEEeeeeeEEcCCCEEEEecCCcEE
Confidence 999999999999999999999999999999998742 2333333221 0112246678766554444433
Q ss_pred EEEEecCCHHHHHHHHHHHhcCCceEEEcCChhHHHHHHHHHHHHHHHHHHHHhcccc---hhH-HHHHHHHHHHHHHHH
Q 014700 278 AMVVASKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLG---NNS-MAALVAQGCSEIRWL 353 (420)
Q Consensus 278 ~i~ia~~d~e~~~~l~~ll~~~g~~v~~s~Di~g~e~~~alkNv~Ai~~G~~~gl~lg---~N~-~~al~~~~~~E~~~l 353 (420)
.....+.+.+..+.++++|+..|+.++..+|+...+|.|+++|++..+.+...+...+ .|. ...++.+++.|+..+
T Consensus 153 i~~~~~~~~~~~~~~~~ll~~~g~~~~~~~d~~~~~~~Kl~~N~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~E~~~l 232 (316)
T 2ew2_A 153 LENIDPSGKKFALEVVDVFQKAGLNPSYSSNVRYSIWRKACVNGTLNGLCTILDCNIAEFGALPVSESLVKTLISEFAAV 232 (316)
T ss_dssp EEESSGGGHHHHHHHHHHHHHTTCCEEECTTHHHHHHHHHHHHTTHHHHHHHHTCCHHHHHTSTTHHHHHHHHHHHHHHH
T ss_pred EeecCCCccHHHHHHHHHHHhCCCCcEEchhHHHHHHHHHHHhhhHHHHHHHhCCcHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 2223455778889999999999999999999999999999999877766665555322 233 347889999999999
Q ss_pred HHHcCCChhhhhhccccchhhhhhcccC--CCCcc-ccccc-cCCCC
Q 014700 354 ATKMGAKPATITGLSGTGDIMLTCFVNL--SRNRT-VGVRL-GSGEK 396 (420)
Q Consensus 354 A~a~Gi~~~t~~~l~g~gdl~~t~~~~~--sRn~~-~G~~l-~~g~~ 396 (420)
++++|++++ ...+.|++.+|.+.. ++|++ +...+ .+|..
T Consensus 233 a~~~G~~~~----~~~~~~~~~~~~~~~~~~~~~~sm~~d~~~~g~~ 275 (316)
T 2ew2_A 233 AEKEAIYLD----QAEVYTHIVQTYDPNGIGLHYPSMYQDLIKNHRL 275 (316)
T ss_dssp HHHTTCCCC----HHHHHHHHHHTTCTTTTTTSCCHHHHHHTTTCCC
T ss_pred HHHcCCCCC----hHHHHHHHHHHhccccCCCCCcHHHHHHHHcCCc
Confidence 999999873 234556666665544 56654 44445 55543
No 13
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=99.93 E-value=8.2e-25 Score=225.60 Aligned_cols=223 Identities=17% Similarity=0.186 Sum_probs=187.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCC-------CCCceEEeCCHHHhccC
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQK-------LPENVIATTDAKTALLG 199 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~-------l~~~i~a~td~~eal~~ 199 (420)
..+|+|||+|+||+++|..|+++| |+|++|||++++++.+++ +.++.|+|+.. .+.++++++|+++++++
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G--~~V~~~D~~~~kv~~l~~-g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~ 84 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFG--HEVVCVDKDARKIELLHQ-NVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKD 84 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCSTTHHHHTT-TCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTT
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHhc-CCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhc
Confidence 468999999999999999999999 999999999999999987 56777888764 35678999999999999
Q ss_pred CcEEEEccChh-----------hHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCeEEEECcccH
Q 014700 200 ADYCLHAMPVQ-----------FSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFA 268 (420)
Q Consensus 200 aDiVIlaVp~~-----------~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~~vl~GP~~a 268 (420)
||+||+|||+. +++++++++.++++++++||..+ ++.+.+.+.+.+.+.+..+. .++.++++|.++
T Consensus 85 aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~S-Tv~pgtt~~l~~~l~e~~~~--~d~~v~~~Pe~a 161 (446)
T 4a7p_A 85 ADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKS-TVPVGTGDEVERIIAEVAPN--SGAKVVSNPEFL 161 (446)
T ss_dssp CSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECS-CCCTTHHHHHHHHHHHHSTT--SCCEEEECCCCC
T ss_pred CCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeC-CCCchHHHHHHHHHHHhCCC--CCceEEeCcccc
Confidence 99999998854 59999999999999999999887 79998888888888776443 467899999998
Q ss_pred HHHhh----cCCeEEEEecCCHHHHHHHHHHHhcCCce---EEEcCChhHHHHHHHHHHHHHHHHHHHHhcccchhHHHH
Q 014700 269 LELMN----KLPTAMVVASKDRKLANAVQQLLASKHLR---ISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAA 341 (420)
Q Consensus 269 ~ev~~----g~~t~i~ia~~d~e~~~~l~~ll~~~g~~---v~~s~Di~g~e~~~alkNv~Ai~~G~~~gl~lg~N~~~a 341 (420)
.+... ..++.+++++.+++..++++++|+..+.. ++...|+.+.|+.| +.+|...+
T Consensus 162 ~eG~a~~d~~~p~~ivvG~~~~~~~~~~~~ly~~~~~~~~~~~~~~d~~~aE~~K-----------------l~~N~~~a 224 (446)
T 4a7p_A 162 REGAAIEDFKRPDRVVVGTEDEFARQVMREIYRPLSLNQSAPVLFTGRRTSELIK-----------------YAANAFLA 224 (446)
T ss_dssp CTTSHHHHHHSCSCEEEECSCHHHHHHHHHHHCSCC-----CEEEECHHHHHHHH-----------------HHHHHHHH
T ss_pred cccchhhhccCCCEEEEeCCcHHHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHH-----------------HHHHHHHH
Confidence 76432 46667778887888999999999876543 46777887777654 56778888
Q ss_pred HHHHHHHHHHHHHHHcCCChhhhhhccccch
Q 014700 342 LVAQGCSEIRWLATKMGAKPATITGLSGTGD 372 (420)
Q Consensus 342 l~~~~~~E~~~lA~a~Gi~~~t~~~l~g~gd 372 (420)
+..++++|+..+|+++|+|++++++..+...
T Consensus 225 ~~ia~~nE~~~l~~~~GiD~~~v~~~~~~~~ 255 (446)
T 4a7p_A 225 VKITFINEIADLCEQVGADVQEVSRGIGMDN 255 (446)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHHHTST
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHhcCC
Confidence 9999999999999999999999999876553
No 14
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=99.92 E-value=4.7e-24 Score=220.47 Aligned_cols=224 Identities=18% Similarity=0.181 Sum_probs=184.6
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCC--C-----CCceEEeCCHHHhccCC
Q 014700 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQK--L-----PENVIATTDAKTALLGA 200 (420)
Q Consensus 128 mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~--l-----~~~i~a~td~~eal~~a 200 (420)
|||+|||+|.||.++|..|+++| ++|++||+++++++.+++ +....+.++.. + ..++.+++|+++++++|
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G--~~V~~~D~~~~~v~~l~~-g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~a 79 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELG--ANVRCIDTDRNKIEQLNS-GTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEA 79 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHH-TCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGC
T ss_pred CEEEEECcCHHHHHHHHHHHhcC--CEEEEEECCHHHHHHHHc-CCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcC
Confidence 79999999999999999999998 999999999999999988 55556666543 1 45688999999999999
Q ss_pred cEEEEccChh----------hHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCC--CCCeEEEECcccH
Q 014700 201 DYCLHAMPVQ----------FSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNP--RQPFIALSGPSFA 268 (420)
Q Consensus 201 DiVIlaVp~~----------~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~--~~~~~vl~GP~~a 268 (420)
|+||+|||+. +++++++++.++++++++||..+ ++.+.+.+.+.+.+.+..+.. ...+.+.++|.++
T Consensus 80 DvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~S-Tv~pgt~~~l~~~l~~~~~~~~~~~d~~v~~~Pe~a 158 (450)
T 3gg2_A 80 DIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKS-TVPVGSYRLIRKAIQEELDKREVLIDFDIASNPEFL 158 (450)
T ss_dssp SEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECS-CCCTTHHHHHHHHHHHHHHHTTCCCCEEEEECCCCC
T ss_pred CEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEee-eCCCcchHHHHHHHHHhccccCcCcceeEEechhhh
Confidence 9999999977 89999999999999999999888 488887777888777653211 1357899999998
Q ss_pred HHHhh----cCCeEEEEecCCHHHHHHHHHHHhcCCc--eEEEcCChhHHHHHHHHHHHHHHHHHHHHhcccchhHHHHH
Q 014700 269 LELMN----KLPTAMVVASKDRKLANAVQQLLASKHL--RISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAAL 342 (420)
Q Consensus 269 ~ev~~----g~~t~i~ia~~d~e~~~~l~~ll~~~g~--~v~~s~Di~g~e~~~alkNv~Ai~~G~~~gl~lg~N~~~al 342 (420)
.+... ..++.+++++.+++..++++++|+..+. ..+...|+.+.|+.| +.+|...++
T Consensus 159 ~eG~~~~~~~~p~~ivvG~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~aE~~K-----------------l~~N~~~a~ 221 (450)
T 3gg2_A 159 KEGNAIDDFMKPDRVVVGVDSDRARELITSLYKPMLLNNFRVLFMDIASAEMTK-----------------YAANAMLAT 221 (450)
T ss_dssp CTTSHHHHHHSCSCEEEEESSHHHHHHHHHHHTTTCCSCCCEEEECHHHHHHHH-----------------HHHHHHHHH
T ss_pred cccchhhhccCCCEEEEEcCCHHHHHHHHHHHHHHhcCCCeEEecCHHHHHHHH-----------------HHHHHHHHH
Confidence 76322 4566677888888999999999997654 245677888777754 567888899
Q ss_pred HHHHHHHHHHHHHHcCCChhhhhhccccch
Q 014700 343 VAQGCSEIRWLATKMGAKPATITGLSGTGD 372 (420)
Q Consensus 343 ~~~~~~E~~~lA~a~Gi~~~t~~~l~g~gd 372 (420)
..++++|+..+|+++|+|++++++..+...
T Consensus 222 ~ia~~nE~~~l~~~~Gid~~~v~~~~~~~~ 251 (450)
T 3gg2_A 222 RISFMNDVANLCERVGADVSMVRLGIGSDS 251 (450)
T ss_dssp HHHHHHHHHHHHHHHTCCHHHHHHHHHTST
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHcCCC
Confidence 999999999999999999999999877653
No 15
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=99.91 E-value=1.1e-23 Score=219.20 Aligned_cols=242 Identities=21% Similarity=0.211 Sum_probs=188.0
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCC--C-----CCceEEeCCHHHhcc
Q 014700 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQK--L-----PENVIATTDAKTALL 198 (420)
Q Consensus 126 ~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~--l-----~~~i~a~td~~eal~ 198 (420)
..|||+|||+|+||+++|..|+++| |+|++||+++++++.+++.+ ...+.++.. + ..++.+++|++++++
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G--~~V~~~d~~~~~v~~l~~~~-~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~ 83 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIG--HDVFCLDVDQAKIDILNNGG-VPIHEPGLKEVIARNRSAGRLRFSTDIEAAVA 83 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHTTC-CSSCCTTHHHHHHHHHHTTCEEEECCHHHHHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhCC--CEEEEEECCHHHHHHHHCCC-CCcCCCCHHHHHHHhcccCCEEEECCHHHHhh
Confidence 3689999999999999999999999 99999999999999999865 445555532 1 245789999988889
Q ss_pred CCcEEEEccCh----------hhHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHh--CCCCCCeEEEECcc
Q 014700 199 GADYCLHAMPV----------QFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQAL--RNPRQPFIALSGPS 266 (420)
Q Consensus 199 ~aDiVIlaVp~----------~~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~l--g~~~~~~~vl~GP~ 266 (420)
+||+||+|||+ .++++++++|.++++++++||..+ ++.+.+.+.+.+.+.+.+ |.....+.+.++|.
T Consensus 84 ~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~S-Tv~~gt~~~l~~~l~~~~~~g~~~~~~~v~~~Pe 162 (478)
T 2y0c_A 84 HGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKS-TVPVGTAERVRAAVAEELAKRGGDQMFSVVSNPE 162 (478)
T ss_dssp HCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECS-CCCTTHHHHHHHHHHHHHHHTTCCCCEEEEECCC
T ss_pred cCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEeC-CcCCCchHHHHHHHHHHhcCCCCCccEEEEEChh
Confidence 99999999998 789999999999999999998877 788877777777777653 21003567899999
Q ss_pred cHHHHhh----cCCeEEEEecCCH----HHHHHHHHHHhcCCc--eEEEcCChhHHHHHHHHHHHHHHHHHHHHhcccch
Q 014700 267 FALELMN----KLPTAMVVASKDR----KLANAVQQLLASKHL--RISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGN 336 (420)
Q Consensus 267 ~a~ev~~----g~~t~i~ia~~d~----e~~~~l~~ll~~~g~--~v~~s~Di~g~e~~~alkNv~Ai~~G~~~gl~lg~ 336 (420)
++.+... +.+..+++++.++ +..++++++|+.... .++...|+...+|.|++ .
T Consensus 163 ~~~eG~~~~~~~~p~~iviG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~di~~ae~~Kl~-----------------~ 225 (478)
T 2y0c_A 163 FLKEGAAVDDFTRPDRIVIGCDDDVPGERARELMKKLYAPFNRNHERTLYMDVRSAEFTKYA-----------------A 225 (478)
T ss_dssp CCCTTCHHHHHHSCSCEEEECCSSHHHHHHHHHHHHHTGGGGSSSCCEEEECHHHHHHHHHH-----------------H
T ss_pred hhcccceeeccCCCCEEEEEECCCcccHHHHHHHHHHHHHHhccCCeEEcCCHHHHHHHHHH-----------------H
Confidence 8865322 4555567777655 788999999987332 47788899999998754 4
Q ss_pred hHHHHHHHHHHHHHHHHHHHcCCChhhhhhccccchhhhhhcccCCCCccccccccCC
Q 014700 337 NSMAALVAQGCSEIRWLATKMGAKPATITGLSGTGDIMLTCFVNLSRNRTVGVRLGSG 394 (420)
Q Consensus 337 N~~~al~~~~~~E~~~lA~a~Gi~~~t~~~l~g~gdl~~t~~~~~sRn~~~G~~l~~g 394 (420)
|...++....++|+..+|+++|++++++.+..+... ....+++.+|+.++..
T Consensus 226 N~~~a~~ia~~nE~~~la~~~Gid~~~v~~~i~~~~------rig~~~~~pG~g~gg~ 277 (478)
T 2y0c_A 226 NAMLATRISFMNELANLADRFGADIEAVRRGIGSDP------RIGYHFLYAGCGYGGS 277 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTST------TTCSTTCCCSSCCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhcCC------ccCcccCCCCcccccC
Confidence 556778889999999999999999998886554221 1123567778766544
No 16
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=99.91 E-value=2.5e-24 Score=210.72 Aligned_cols=224 Identities=14% Similarity=0.094 Sum_probs=167.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhc-----CCCCeEEEEeCCHHHHHHHHH-hcCCCCCCCCCCCCCceEEeCCHHHhccCC
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANK-----KSQLKVYMLMRDPAVCQSINE-KHCNCRYFPEQKLPENVIATTDAKTALLGA 200 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~a-----G~~~~V~l~~r~~~~~~~i~~-~g~~~~~l~~~~l~~~i~a~td~~eal~~a 200 (420)
+|||+|||+|+||+++|..|+++ | .++|++|+| +++++.+++ .|......++.....++.++++.+ .+.++
T Consensus 8 ~m~I~iiG~G~mG~~~a~~L~~~~~~~~g-~~~V~~~~r-~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 84 (317)
T 2qyt_A 8 PIKIAVFGLGGVGGYYGAMLALRAAATDG-LLEVSWIAR-GAHLEAIRAAGGLRVVTPSRDFLARPTCVTDNPA-EVGTV 84 (317)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHTTS-SEEEEEECC-HHHHHHHHHHTSEEEECSSCEEEECCSEEESCHH-HHCCE
T ss_pred CCEEEEECcCHHHHHHHHHHHhCccccCC-CCCEEEEEc-HHHHHHHHhcCCeEEEeCCCCeEEecceEecCcc-ccCCC
Confidence 37999999999999999999987 6 269999999 888899988 665433222221122345666664 46899
Q ss_pred cEEEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCC------CeEEEECcccHHHHhhc
Q 014700 201 DYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQ------PFIALSGPSFALELMNK 274 (420)
Q Consensus 201 DiVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~------~~~vl~GP~~a~ev~~g 274 (420)
|+||+|||++.++++++++.+.++++++||+++||+... +.+.+.++.... ..+.+.+|+...+...+
T Consensus 85 D~vil~vk~~~~~~v~~~i~~~l~~~~~iv~~~nG~~~~------~~l~~~l~~~~v~~g~~~~~a~~~~pg~~~~~~~g 158 (317)
T 2qyt_A 85 DYILFCTKDYDMERGVAEIRPMIGQNTKILPLLNGADIA------ERMRTYLPDTVVWKGCVYISARKSAPGLITLEADR 158 (317)
T ss_dssp EEEEECCSSSCHHHHHHHHGGGEEEEEEEEECSCSSSHH------HHHTTTSCTTTBCEEEEEEEEEEEETTEEEEEEEE
T ss_pred CEEEEecCcccHHHHHHHHHhhcCCCCEEEEccCCCCcH------HHHHHHCCCCcEEEEEEEEEEEEcCCCEEEEcCCC
Confidence 999999999999999999999888889999999998642 345555543110 12344556554332222
Q ss_pred CCeEEEEecC----CHHHHHHHHHHHhcCCceEEEcCChhHHHHHHHHHHHHHHHHHHHHhcccchhH--HHHHHHHHHH
Q 014700 275 LPTAMVVASK----DRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNS--MAALVAQGCS 348 (420)
Q Consensus 275 ~~t~i~ia~~----d~e~~~~l~~ll~~~g~~v~~s~Di~g~e~~~alkNv~Ai~~G~~~gl~lg~N~--~~al~~~~~~ 348 (420)
...++++. +.+.. .++++|+..|+.+++.+|+...+|.|+++|+...+.+...+...+.+. ...++.++++
T Consensus 159 --~~~~ig~~~~~~~~~~~-~~~~ll~~~g~~~~~~~di~~~~~~Kl~~N~~~~~~~al~g~~~g~~~~~~~~~~~~~~~ 235 (317)
T 2qyt_A 159 --ELFYFGSGLPEQTDDEV-RLAELLTAAGIRAYNPTDIDWYIMKKFMMISVTATATAYFDKPIGSILTEHEPELLSLLE 235 (317)
T ss_dssp --EEEEEECCSSSCCHHHH-HHHHHHHHTTCCEECCSCHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHCHHHHHHHHH
T ss_pred --ceEEEcCCCCCCcCHHH-HHHHHHHHCCCCCEEchHHHHHHHHHHHHHHhhHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 22325432 46667 899999999999999999999999999999988887777777666543 3478889999
Q ss_pred HHHHHHHHcCCChh
Q 014700 349 EIRWLATKMGAKPA 362 (420)
Q Consensus 349 E~~~lA~a~Gi~~~ 362 (420)
|+.++++++|++++
T Consensus 236 E~~~v~~a~G~~~~ 249 (317)
T 2qyt_A 236 EVAELFRAKYGQVP 249 (317)
T ss_dssp HHHHHHHHHTSCCC
T ss_pred HHHHHHHHcCCCCC
Confidence 99999999999875
No 17
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=99.91 E-value=2.6e-23 Score=204.23 Aligned_cols=225 Identities=16% Similarity=0.192 Sum_probs=169.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEc
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIla 206 (420)
|+||+|||+|.||.+||.+|.++| |+|++|||++++++.+.+.| .+..++++|+++.+|+||+|
T Consensus 3 M~kIgfIGlG~MG~~mA~~L~~~G--~~v~v~dr~~~~~~~l~~~G--------------a~~a~s~~e~~~~~dvv~~~ 66 (300)
T 3obb_A 3 MKQIAFIGLGHMGAPMATNLLKAG--YLLNVFDLVQSAVDGLVAAG--------------ASAARSARDAVQGADVVISM 66 (300)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTT--CEEEEECSSHHHHHHHHHTT--------------CEECSSHHHHHTTCSEEEEC
T ss_pred cCEEEEeeehHHHHHHHHHHHhCC--CeEEEEcCCHHHHHHHHHcC--------------CEEcCCHHHHHhcCCceeec
Confidence 679999999999999999999999 99999999999999998865 35667899999999999999
Q ss_pred cCh-hhHHHHHHH---hhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCeEEEECcccHHHHhhcCCeEEEEe
Q 014700 207 MPV-QFSSSFLEG---ISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVA 282 (420)
Q Consensus 207 Vp~-~~l~~vl~~---i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~~vl~GP~~a~ev~~g~~t~i~ia 282 (420)
+|. .++++++.. +.+.++++++||.+++ +.+++.+.+.+.+.+. | +.++.+|...........+..++.
T Consensus 67 l~~~~~v~~V~~~~~g~~~~~~~g~iiId~sT-~~p~~~~~~a~~~~~~-G-----~~~lDaPVsGg~~~A~~G~L~imv 139 (300)
T 3obb_A 67 LPASQHVEGLYLDDDGLLAHIAPGTLVLECST-IAPTSARKIHAAARER-G-----LAMLDAPVSGGTAGAAAGTLTFMV 139 (300)
T ss_dssp CSCHHHHHHHHHSSSSSTTSCCC-CEEEECSC-CCHHHHHHHHHHHHTT-T-----CEEEECCEESCHHHHHHTCEEEEE
T ss_pred CCchHHHHHHHhchhhhhhcCCCCCEEEECCC-CCHHHHHHHHHHHHHc-C-----CEEEecCCCCCHHHHHhCCEEEEE
Confidence 995 568888865 6677889999999986 6776656666666543 3 345666654433222223445566
Q ss_pred cCCHHHHHHHHHHHhcCCceEEEcCChhHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHcCCChh
Q 014700 283 SKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGAKPA 362 (420)
Q Consensus 283 ~~d~e~~~~l~~ll~~~g~~v~~s~Di~g~e~~~alkNv~Ai~~G~~~gl~lg~N~~~al~~~~~~E~~~lA~a~Gi~~~ 362 (420)
+++++.+++++++|+..+-++++..+. | ....+|+.+|........++.|...++++.|++++
T Consensus 140 GG~~~~~~~~~p~l~~~g~~i~~~G~~-G----------------~g~~~Kl~~N~l~~~~~~a~aEa~~la~~~Gld~~ 202 (300)
T 3obb_A 140 GGDAEALEKARPLFEAMGRNIFHAGPD-G----------------AGQVAKVCNNQLLAVLMIGTAEAMALGVANGLEAK 202 (300)
T ss_dssp ESCHHHHHHHHHHHHHHEEEEEEEEST-T----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHH
T ss_pred eCCHHHHHHHHHHHHHhCCCEEEeCCc-c----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH
Confidence 778999999999999999888888775 2 22344566778888888999999999999999999
Q ss_pred hhhhcc--ccch---hhhhh-------cccCCCCccccccc
Q 014700 363 TITGLS--GTGD---IMLTC-------FVNLSRNRTVGVRL 391 (420)
Q Consensus 363 t~~~l~--g~gd---l~~t~-------~~~~sRn~~~G~~l 391 (420)
++++.. +.+. +.... .....|+|..||.+
T Consensus 203 ~~~~vl~~~~~~s~~~~~~~p~~~~~~~~~~~~~~~~~f~~ 243 (300)
T 3obb_A 203 VLAEIMRRSSGGNWALEVYNPWPGVMENAPASRDYSGGFMA 243 (300)
T ss_dssp HHHHHHHTSTTCCHHHHHCCCSTTTSTTSGGGGTTCSSSBH
T ss_pred HHHHHHHhCcccchHHHhhccccchhhhccccccCCccchH
Confidence 998842 2221 11111 12346788888865
No 18
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=99.89 E-value=4.3e-23 Score=214.91 Aligned_cols=243 Identities=12% Similarity=0.093 Sum_probs=174.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccC---CcE
Q 014700 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLG---ADY 202 (420)
Q Consensus 126 ~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~---aDi 202 (420)
..|||+|||+|.||++||..|+++| ++|++|+|++++++.+.+... + .++..++++++++++ +|+
T Consensus 14 ~~~~IgvIGlG~MG~~lA~~La~~G--~~V~v~~r~~~~~~~l~~~~~------~----~gi~~~~s~~e~v~~l~~aDv 81 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGRNLALNIESRG--YTVSIFNRSREKTEEVIAENP------G----KKLVPYYTVKEFVESLETPRR 81 (480)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHTTT--CCEEEECSSHHHHHHHHHHST------T----SCEEECSSHHHHHHTBCSSCE
T ss_pred CCCeEEEEccHHHHHHHHHHHHhCC--CeEEEEeCCHHHHHHHHhhCC------C----CCeEEeCCHHHHHhCCCCCCE
Confidence 4579999999999999999999998 899999999999998887531 0 246677889888776 999
Q ss_pred EEEccCh-hhHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCeEEEECcccHHHH-hhcCCeEEE
Q 014700 203 CLHAMPV-QFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALEL-MNKLPTAMV 280 (420)
Q Consensus 203 VIlaVp~-~~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~~vl~GP~~a~ev-~~g~~t~i~ 280 (420)
||+|||+ ..++++++++.+.++++++||+++||....+ ..+.+.+.+. | +.++.+|....+. +...+ .++
T Consensus 82 Vil~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~g~~~~t-~~l~~~l~~~-g-----~~~v~~pv~gg~~~a~~g~-~i~ 153 (480)
T 2zyd_A 82 ILLMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTFFQDT-IRRNRELSAE-G-----FNFIGTGVSGGEEGALKGP-SIM 153 (480)
T ss_dssp EEECSCSSSHHHHHHHHHGGGCCTTCEEEECSCCCHHHH-HHHHHHHHHT-T-----CEEEEEEEESHHHHHHHCC-EEE
T ss_pred EEEECCCHHHHHHHHHHHHhhcCCCCEEEECCCCCHHHH-HHHHHHHHHC-C-----CCeeCCccccCHhHHhcCC-eEE
Confidence 9999998 5899999999999999999999999876543 2334555442 2 2233444433322 22233 344
Q ss_pred EecCCHHHHHHHHHHHhcCCce-------EEEcCChhHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHH
Q 014700 281 VASKDRKLANAVQQLLASKHLR-------ISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWL 353 (420)
Q Consensus 281 ia~~d~e~~~~l~~ll~~~g~~-------v~~s~Di~g~e~~~alkNv~Ai~~G~~~gl~lg~N~~~al~~~~~~E~~~l 353 (420)
. +.+++..++++++|+..+.. +.+..+ .|....+|+.+|....++.+++.|+.++
T Consensus 154 ~-gg~~~~~~~v~~ll~~~g~~~~dGe~~v~~~g~-----------------~G~g~~~Kl~~N~~~~~~~~~laEa~~l 215 (480)
T 2zyd_A 154 P-GGQKEAYELVAPILTKIAAVAEDGEPCVTYIGA-----------------DGAGHYVKMVHNGIEYGDMQLIAEAYSL 215 (480)
T ss_dssp E-ESCHHHHHHHHHHHHHHSCBCTTSCBSBCCCBS-----------------TTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred e-cCCHHHHHHHHHHHHHHhccccCCCceEEEECC-----------------ccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 45788899999999987765 333333 1344556677888888999999999999
Q ss_pred HHH-cCCChhhhhhcc-----c-cchhhhhhcccCCCCccccccccCCCChHHHHHHcCCcccc
Q 014700 354 ATK-MGAKPATITGLS-----G-TGDIMLTCFVNLSRNRTVGVRLGSGEKLDDILSSMNQVLVN 410 (420)
Q Consensus 354 A~a-~Gi~~~t~~~l~-----g-~gdl~~t~~~~~sRn~~~G~~l~~g~~~~~~~~~~~~~~eG 410 (420)
+++ +|++++++.++. | .++++.+|++...|++.+ ..|..++.+.+..++..+|
T Consensus 216 ~~~~lGl~~~~~~~l~~~w~~g~~~s~l~~~~~~~l~~~d~----~~~~~v~~i~D~~~~k~tG 275 (480)
T 2zyd_A 216 LKGGLNLTNEELAQTFTEWNNGELSSYLIDITKDIFTKKDE----DGNYLVDVILDEAANKGTG 275 (480)
T ss_dssp HHHHHCCCHHHHHHHHHHHHHTTTCBHHHHHHHHHHHCBCT----TSSBGGGGBCCCCCCCSCT
T ss_pred HHHhcCCCHHHHHHHHHHhcCCCcccHHHHHHHHHHhcCCC----CCcchHHHHHHHhcCchHH
Confidence 999 799999998865 5 788888888765544333 1223344444334444444
No 19
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=99.89 E-value=1.5e-23 Score=204.70 Aligned_cols=209 Identities=13% Similarity=0.114 Sum_probs=153.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhc-cCCcEEEE
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL-LGADYCLH 205 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal-~~aDiVIl 205 (420)
+|||+|||+|+||+++|..|+++| ++|++|+|+++.++. .. ..+ ..+..+. .++.+++ +++|+||+
T Consensus 2 ~mkI~iiGaGa~G~~~a~~L~~~g--~~V~~~~r~~~~~~~---~~-----~~g-~~~~~~~--~~~~~~~~~~~D~vil 68 (294)
T 3g17_A 2 SLSVAIIGPGAVGTTIAYELQQSL--PHTTLIGRHAKTITY---YT-----VPH-APAQDIV--VKGYEDVTNTFDVIII 68 (294)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHHC--TTCEEEESSCEEEEE---ES-----STT-SCCEEEE--EEEGGGCCSCEEEEEE
T ss_pred CcEEEEECCCHHHHHHHHHHHHCC--CeEEEEEeccCcEEE---Ee-----cCC-eecccee--cCchHhcCCCCCEEEE
Confidence 489999999999999999999998 899999998643211 00 011 1222232 2444544 78999999
Q ss_pred ccChhhHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHH--HhCCCCCCeEEEECcccHHHHhhcCCeEEEEec
Q 014700 206 AMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQ--ALRNPRQPFIALSGPSFALELMNKLPTAMVVAS 283 (420)
Q Consensus 206 aVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~--~lg~~~~~~~vl~GP~~a~ev~~g~~t~i~ia~ 283 (420)
|||+++++++++++.++++++++||+++||++..+. +.. .++......+.+.||+++. . + +..+.++
T Consensus 69 avk~~~~~~~l~~l~~~l~~~~~iv~~~nGi~~~~~------~~~~~v~~g~~~~~a~~~~pg~v~-~--~-~~~~~~~- 137 (294)
T 3g17_A 69 AVKTHQLDAVIPHLTYLAHEDTLIILAQNGYGQLEH------IPFKNVCQAVVYISGQKKGDVVTH-F--R-DYQLRIQ- 137 (294)
T ss_dssp CSCGGGHHHHGGGHHHHEEEEEEEEECCSSCCCGGG------CCCSCEEECEEEEEEEEETTEEEE-E--E-EEEEEEE-
T ss_pred eCCccCHHHHHHHHHHhhCCCCEEEEeccCcccHhh------CCCCcEEEEEEEEEEEEcCCCEEE-E--C-CCEEecC-
Confidence 999999999999999999889999999999987632 111 1111001134577888762 1 2 3334342
Q ss_pred CCHHHHHHHHHHHhcCCceEEEcCChhHHHHHHHHHHHHHHHHHHHHhcccc----hhHHHHHHHHHHHHHHHHHHHcCC
Q 014700 284 KDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLG----NNSMAALVAQGCSEIRWLATKMGA 359 (420)
Q Consensus 284 ~d~e~~~~l~~ll~~~g~~v~~s~Di~g~e~~~alkNv~Ai~~G~~~gl~lg----~N~~~al~~~~~~E~~~lA~a~Gi 359 (420)
+.+..++++++|+..+++++.++|+.+.+|.|+++|+....+++ .+...| ++....++.++++|+.++++++|+
T Consensus 138 -~~~~~~~l~~~l~~~~~~~~~~~di~~~~w~Kl~~N~~inl~al-~~~~~g~~l~~~~~~~l~~~~~~E~~~va~a~G~ 215 (294)
T 3g17_A 138 -DNALTRQFRDLVQDSQIDIVLEANIQQAIWYKLLVNLGINSITA-LGRQTVAIMHNPEIRILCRQLLLDGCRVAQAEGL 215 (294)
T ss_dssp -CSHHHHHHHHHTTTSSCEEEEESSHHHHHHHHHHHHHHHHHHHH-HHTSCGGGGGSHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred -ccHHHHHHHHHHHhCCCceEEChHHHHHHHHHHHHHHHHHHHHH-HCCChHHHHcCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 45678999999999999999999999999999999983323333 344444 677889999999999999999999
Q ss_pred Ch
Q 014700 360 KP 361 (420)
Q Consensus 360 ~~ 361 (420)
+.
T Consensus 216 ~l 217 (294)
T 3g17_A 216 NF 217 (294)
T ss_dssp CC
T ss_pred CC
Confidence 74
No 20
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=99.89 E-value=3.5e-22 Score=196.61 Aligned_cols=230 Identities=17% Similarity=0.134 Sum_probs=166.2
Q ss_pred hhhcCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCc
Q 014700 122 DILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGAD 201 (420)
Q Consensus 122 ~~~~~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aD 201 (420)
.....||||+|||+|.||.+||..|+++| ++|++|+|++++++.+.+.| +..+++++++++++|
T Consensus 16 ~~~~~m~~I~iIG~G~mG~~~A~~l~~~G--~~V~~~dr~~~~~~~l~~~g--------------~~~~~~~~~~~~~aD 79 (310)
T 3doj_A 16 PRGSHMMEVGFLGLGIMGKAMSMNLLKNG--FKVTVWNRTLSKCDELVEHG--------------ASVCESPAEVIKKCK 79 (310)
T ss_dssp --CCCSCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSGGGGHHHHHTT--------------CEECSSHHHHHHHCS
T ss_pred cccccCCEEEEECccHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHHHHCC--------------CeEcCCHHHHHHhCC
Confidence 34456799999999999999999999998 99999999999888888654 356678999999999
Q ss_pred EEEEccCh-hhHHHHH---HHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCeEEEECcccHHHHhhcCCe
Q 014700 202 YCLHAMPV-QFSSSFL---EGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPT 277 (420)
Q Consensus 202 iVIlaVp~-~~l~~vl---~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~~vl~GP~~a~ev~~g~~t 277 (420)
+||+|||. ..+++++ +++.+.++++++||++++ +.+.+.+.+.+.+.+. |. .++..|...........+
T Consensus 80 vvi~~vp~~~~~~~v~~~~~~l~~~l~~g~~vv~~st-~~~~~~~~~~~~~~~~-g~-----~~v~~pv~g~~~~a~~g~ 152 (310)
T 3doj_A 80 YTIAMLSDPCAALSVVFDKGGVLEQICEGKGYIDMST-VDAETSLKINEAITGK-GG-----RFVEGPVSGSKKPAEDGQ 152 (310)
T ss_dssp EEEECCSSHHHHHHHHHSTTCGGGGCCTTCEEEECSC-CCHHHHHHHHHHHHHT-TC-----EEEECCEECCHHHHHHTC
T ss_pred EEEEEcCCHHHHHHHHhCchhhhhccCCCCEEEECCC-CCHHHHHHHHHHHHHc-CC-----EEEeCCCCCChhHHhcCC
Confidence 99999996 5788888 788888999999999874 5665555555555543 32 234444433221111123
Q ss_pred EEEEecCCHHHHHHHHHHHhcCCceEEEcCChhHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHc
Q 014700 278 AMVVASKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKM 357 (420)
Q Consensus 278 ~i~ia~~d~e~~~~l~~ll~~~g~~v~~s~Di~g~e~~~alkNv~Ai~~G~~~gl~lg~N~~~al~~~~~~E~~~lA~a~ 357 (420)
..++.+++++.+++++++|+..|.++++.++....++. |+.+|........+++|+..++++.
T Consensus 153 l~i~~gg~~~~~~~~~~ll~~~g~~~~~~g~~g~a~~~-----------------Kl~~N~~~~~~~~~~~Ea~~l~~~~ 215 (310)
T 3doj_A 153 LIILAAGDKALFEESIPAFDVLGKRSFYLGQVGNGAKM-----------------KLIVNMIMGSMMNAFSEGLVLADKS 215 (310)
T ss_dssp EEEEEEECHHHHHHHHHHHHHHEEEEEECSSTTHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred eEEEEcCCHHHHHHHHHHHHHhCCCEEEeCCcCHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 33445567889999999999999888888775444443 3456666777788999999999999
Q ss_pred CCChhhhhhccccch----h-hhhhcccCCCCccccccc
Q 014700 358 GAKPATITGLSGTGD----I-MLTCFVNLSRNRTVGVRL 391 (420)
Q Consensus 358 Gi~~~t~~~l~g~gd----l-~~t~~~~~sRn~~~G~~l 391 (420)
|++++++.+..+.+. + -........++|..||.+
T Consensus 216 G~d~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~f~~ 254 (310)
T 3doj_A 216 GLSSDTLLDILDLGAMTNPMFKGKGPSMNKSSYPPAFPL 254 (310)
T ss_dssp TSCHHHHHHHHHHSTTCCHHHHHHHHHHHTTCCCCSSBH
T ss_pred CCCHHHHHHHHHhcccccHHHHHHhhhhhcCCCCCCccH
Confidence 999999988543221 1 011122446777777653
No 21
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=99.88 E-value=1.8e-22 Score=197.84 Aligned_cols=226 Identities=15% Similarity=0.125 Sum_probs=158.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEc
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIla 206 (420)
.+||+|||+|.||.+||.+|+++| |+|++|||++++++.+.+.| ....++++|+++.+|+||+|
T Consensus 5 s~kIgfIGLG~MG~~mA~~L~~~G--~~V~v~dr~~~~~~~l~~~G--------------~~~~~s~~e~~~~~dvvi~~ 68 (297)
T 4gbj_A 5 SEKIAFLGLGNLGTPIAEILLEAG--YELVVWNRTASKAEPLTKLG--------------ATVVENAIDAITPGGIVFSV 68 (297)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTT--CEEEEC-------CTTTTTT--------------CEECSSGGGGCCTTCEEEEC
T ss_pred CCcEEEEecHHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHHHHcC--------------CeEeCCHHHHHhcCCceeee
Confidence 358999999999999999999999 99999999998877665543 46667899999999999999
Q ss_pred cChh-hHHHHH-HHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCeEEEECcccHHHHhhcCCeEEEEecC
Q 014700 207 MPVQ-FSSSFL-EGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVASK 284 (420)
Q Consensus 207 Vp~~-~l~~vl-~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~~vl~GP~~a~ev~~g~~t~i~ia~~ 284 (420)
+|+. .+++++ ..+.+.+++++++|.+++ +.+++.+.+.+.+.+. | +.++.+|...........+..++.++
T Consensus 69 l~~~~~~~~v~~~~~~~~~~~~~iiid~sT-~~p~~~~~~~~~~~~~-g-----~~~ldapVsGg~~~a~~g~l~im~gG 141 (297)
T 4gbj_A 69 LADDAAVEELFSMELVEKLGKDGVHVSMST-ISPETSRQLAQVHEWY-G-----AHYVGAPIFARPEAVRAKVGNICLSG 141 (297)
T ss_dssp CSSHHHHHHHSCHHHHHHHCTTCEEEECSC-CCHHHHHHHHHHHHHT-T-----CEEEECCEECCHHHHHHTCCEEEEEE
T ss_pred ccchhhHHHHHHHHHHhhcCCCeEEEECCC-CChHHHHHHHHHHHhc-C-----CceecCCcCCCccccccccceeeccc
Confidence 9965 455554 557777889999999886 6777666666666553 3 34566665543322222233345567
Q ss_pred CHHHHHHHHHHHhcCCceEEEcCChhHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHcCCChhhh
Q 014700 285 DRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGAKPATI 364 (420)
Q Consensus 285 d~e~~~~l~~ll~~~g~~v~~s~Di~g~e~~~alkNv~Ai~~G~~~gl~lg~N~~~al~~~~~~E~~~lA~a~Gi~~~t~ 364 (420)
+++.+++++++|+..+.++++..+..| ..+.+|+.+|........++.|+..++++.|++++++
T Consensus 142 ~~~~~~~~~~~l~~~g~~i~~~g~~~G----------------~g~~~Kl~~N~~~~~~~~~~aEa~~la~~~Gld~~~~ 205 (297)
T 4gbj_A 142 NAGAKERIKPIVENFVKGVFDFGDDPG----------------AANVIKLAGNFMIACSLEMMGEAFTMAEKNGISRQSI 205 (297)
T ss_dssp CHHHHHHHHHHHHTTCSEEEECCSCTT----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred chhHHHHHHHHHHHhhCCeEEecCCcc----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH
Confidence 889999999999999988887764322 2334456678888888999999999999999999999
Q ss_pred hhcc--ccch---hhhhhcccCCCCcc-ccccc
Q 014700 365 TGLS--GTGD---IMLTCFVNLSRNRT-VGVRL 391 (420)
Q Consensus 365 ~~l~--g~gd---l~~t~~~~~sRn~~-~G~~l 391 (420)
++.. +.+. +.........++|. .||.+
T Consensus 206 ~~~l~~~~~~s~~~~~~~~~~~~~~~~p~~f~~ 238 (297)
T 4gbj_A 206 YEMLTSTLFAAPIFQNYGKLVASNTYEPVAFRF 238 (297)
T ss_dssp HHHHHTTTTCSHHHHHHHHHHHHTCCCSCSSBH
T ss_pred HHHHHhhcccCchhhccCccccCCCCCCccchh
Confidence 9843 2221 11222334567776 36654
No 22
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=99.88 E-value=1e-21 Score=194.22 Aligned_cols=226 Identities=19% Similarity=0.210 Sum_probs=167.2
Q ss_pred cCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEE
Q 014700 125 ERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (420)
Q Consensus 125 ~~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVI 204 (420)
..+|||+|||+|.||.++|..|+++| ++|++|+|++++++.+.+.| +..+++++++++++|+||
T Consensus 29 ~~~~~I~iIG~G~mG~~~a~~l~~~G--~~V~~~dr~~~~~~~l~~~g--------------~~~~~~~~e~~~~aDvVi 92 (320)
T 4dll_A 29 PYARKITFLGTGSMGLPMARRLCEAG--YALQVWNRTPARAASLAALG--------------ATIHEQARAAARDADIVV 92 (320)
T ss_dssp CCCSEEEEECCTTTHHHHHHHHHHTT--CEEEEECSCHHHHHHHHTTT--------------CEEESSHHHHHTTCSEEE
T ss_pred cCCCEEEEECccHHHHHHHHHHHhCC--CeEEEEcCCHHHHHHHHHCC--------------CEeeCCHHHHHhcCCEEE
Confidence 45789999999999999999999998 99999999999988887753 456778999999999999
Q ss_pred EccCh-hhHHHHHH--HhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCeEEEECcccHHHHhhcCCeEEEE
Q 014700 205 HAMPV-QFSSSFLE--GISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVV 281 (420)
Q Consensus 205 laVp~-~~l~~vl~--~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~~vl~GP~~a~ev~~g~~t~i~i 281 (420)
+|||. ..+++++. ++.+.++++++||++++ ..+.+.+.+.+.+.+. | ..++.+|.+.........+..++
T Consensus 93 ~~vp~~~~~~~v~~~~~~~~~l~~~~~vi~~st-~~~~~~~~~~~~~~~~-g-----~~~~~~pv~g~~~~a~~g~l~i~ 165 (320)
T 4dll_A 93 SMLENGAVVQDVLFAQGVAAAMKPGSLFLDMAS-ITPREARDHAARLGAL-G-----IAHLDTPVSGGTVGAEQGTLVIM 165 (320)
T ss_dssp ECCSSHHHHHHHHTTTCHHHHCCTTCEEEECSC-CCHHHHHHHHHHHHHT-T-----CEEEECCEECHHHHHHHTCEEEE
T ss_pred EECCCHHHHHHHHcchhHHhhCCCCCEEEecCC-CCHHHHHHHHHHHHHc-C-----CEEEeCCCcCCHhHHhcCCeeEE
Confidence 99995 67888887 78888889999999876 4554444555555442 2 34556666654432222233445
Q ss_pred ecCCHHHHHHHHHHHhcCCceEEEcCChhHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHcCCCh
Q 014700 282 ASKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGAKP 361 (420)
Q Consensus 282 a~~d~e~~~~l~~ll~~~g~~v~~s~Di~g~e~~~alkNv~Ai~~G~~~gl~lg~N~~~al~~~~~~E~~~lA~a~Gi~~ 361 (420)
.+++++.+++++++|+.. .++++.++....++ +|+.+|........+++|+..++++.|+++
T Consensus 166 ~gg~~~~~~~~~~ll~~~-~~~~~~g~~g~a~~-----------------~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~ 227 (320)
T 4dll_A 166 AGGKPADFERSLPLLKVF-GRATHVGPHGSGQL-----------------TKLANQMIVGITIGAVAEALLFATKGGADM 227 (320)
T ss_dssp EESCHHHHHHHHHHHHHH-EEEEEEESTTHHHH-----------------HHHHHHHHHHHHHHHHHHHHHHHHHTSCCH
T ss_pred eCCCHHHHHHHHHHHHhc-CCEEEeCCccHHHH-----------------HHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 566888999999999988 77777776533333 335567777788889999999999999999
Q ss_pred hhhhhccccc--h---hhhhhcccCCCCccccccc
Q 014700 362 ATITGLSGTG--D---IMLTCFVNLSRNRTVGVRL 391 (420)
Q Consensus 362 ~t~~~l~g~g--d---l~~t~~~~~sRn~~~G~~l 391 (420)
+++++..+.+ + +.......++++|..||.+
T Consensus 228 ~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~gf~~ 262 (320)
T 4dll_A 228 AKVKEAITGGFADSRVLQLHGQRMVERDFAPRARL 262 (320)
T ss_dssp HHHHHHHTTSTTCBHHHHTHHHHHHTTCCCCSSBH
T ss_pred HHHHHHHHcccccCHHHHHhhhhhccCCCCCcccH
Confidence 9998854322 1 1112224557888888754
No 23
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=99.88 E-value=4e-22 Score=193.68 Aligned_cols=203 Identities=15% Similarity=0.151 Sum_probs=156.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEc
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIla 206 (420)
||||+|||+|.||.++|..|+++| |+|++|+|++++++.+.+.| +..+++++++++++|+||+|
T Consensus 1 M~~I~iiG~G~mG~~~a~~l~~~G--~~V~~~dr~~~~~~~~~~~g--------------~~~~~~~~~~~~~advvi~~ 64 (287)
T 3pdu_A 1 MTTYGFLGLGIMGGPMAANLVRAG--FDVTVWNRNPAKCAPLVALG--------------ARQASSPAEVCAACDITIAM 64 (287)
T ss_dssp CCCEEEECCSTTHHHHHHHHHHHT--CCEEEECSSGGGGHHHHHHT--------------CEECSCHHHHHHHCSEEEEC
T ss_pred CCeEEEEccCHHHHHHHHHHHHCC--CeEEEEcCCHHHHHHHHHCC--------------CeecCCHHHHHHcCCEEEEE
Confidence 579999999999999999999998 99999999999888888764 35667899988999999999
Q ss_pred cChh-hHHHHH---HHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCeEEEECcccHHHHhhcCCeEEEEe
Q 014700 207 MPVQ-FSSSFL---EGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVA 282 (420)
Q Consensus 207 Vp~~-~l~~vl---~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~~vl~GP~~a~ev~~g~~t~i~ia 282 (420)
||.. .+++++ +++.+.++++++||++++ ..+.+.+.+.+.+.+. | ..++.+|.+.........+..++.
T Consensus 65 v~~~~~~~~v~~~~~~l~~~l~~g~~vv~~st-~~~~~~~~~~~~~~~~-g-----~~~~~~pv~g~~~~a~~g~l~~~~ 137 (287)
T 3pdu_A 65 LADPAAAREVCFGANGVLEGIGGGRGYIDMST-VDDETSTAIGAAVTAR-G-----GRFLEAPVSGTKKPAEDGTLIILA 137 (287)
T ss_dssp CSSHHHHHHHHHSTTCGGGTCCTTCEEEECSC-CCHHHHHHHHHHHHHT-T-----CEEEECCEECCHHHHHHTCEEEEE
T ss_pred cCCHHHHHHHHcCchhhhhcccCCCEEEECCC-CCHHHHHHHHHHHHHc-C-----CEEEECCccCCHHHHhcCCEEEEE
Confidence 9975 799998 888888889999999886 4555444555555442 2 234555544332222222334455
Q ss_pred cCCHHHHHHHHHHHhcCCceEEEcCChhHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHcCCChh
Q 014700 283 SKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGAKPA 362 (420)
Q Consensus 283 ~~d~e~~~~l~~ll~~~g~~v~~s~Di~g~e~~~alkNv~Ai~~G~~~gl~lg~N~~~al~~~~~~E~~~lA~a~Gi~~~ 362 (420)
+.+++.+++++++|+..+.++++..+....++. |+.+|.....+..++.|+..++++.|++++
T Consensus 138 gg~~~~~~~~~~ll~~~g~~~~~~g~~g~~~~~-----------------Kl~~N~~~~~~~~~~~Ea~~l~~~~G~~~~ 200 (287)
T 3pdu_A 138 AGDQSLFTDAGPAFAALGKKCLHLGEVGQGARM-----------------KLVVNMIMGQMMTALGEGMALGRNCGLDGG 200 (287)
T ss_dssp EECHHHHHHTHHHHHHHEEEEEECSSTTHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHHHHTTCCHH
T ss_pred eCCHHHHHHHHHHHHHhCCCEEEcCCCChHHHH-----------------HHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 668889999999999999888888775433333 455677777888899999999999999999
Q ss_pred hhhhccc
Q 014700 363 TITGLSG 369 (420)
Q Consensus 363 t~~~l~g 369 (420)
++.++.+
T Consensus 201 ~~~~~~~ 207 (287)
T 3pdu_A 201 QLLEVLD 207 (287)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998653
No 24
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=99.88 E-value=9.6e-23 Score=207.26 Aligned_cols=255 Identities=14% Similarity=0.183 Sum_probs=165.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHh-cCCCCeEEEEe---CCHHHHHHH-HHhcC--CCCCCCC--CCCCCceE-EeCCHHHh
Q 014700 127 TNKVVVLGGGSFGTAMAAHVAN-KKSQLKVYMLM---RDPAVCQSI-NEKHC--NCRYFPE--QKLPENVI-ATTDAKTA 196 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~-aG~~~~V~l~~---r~~~~~~~i-~~~g~--~~~~l~~--~~l~~~i~-a~td~~ea 196 (420)
+|||+|||+|+||+++|..|++ +| ++|++|+ |+++.++.+ ++.+. +..+.++ ..++..+. ++++++++
T Consensus 2 ~mkI~ViGaG~~G~~~a~~La~~~G--~~V~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 79 (404)
T 3c7a_A 2 TVKVCVCGGGNGAHTLSGLAASRDG--VEVRVLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPEIA 79 (404)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSTT--EEEEEECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHhCCC--CEEEEEeCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEeCCHHHH
Confidence 5799999999999999999988 58 9999999 887777774 43331 1112222 12222333 67788888
Q ss_pred ccCCcEEEEccChhhHHHHHHHhhhcCCCCCeEEEec--cCCCcchhhhHHHHHHHH-----h-CCCCCCe-EEEECccc
Q 014700 197 LLGADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLS--KGLELNTLRMMSQIIPQA-----L-RNPRQPF-IALSGPSF 267 (420)
Q Consensus 197 l~~aDiVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~s--nGi~~~t~~~~se~l~~~-----l-g~~~~~~-~vl~GP~~ 267 (420)
++++|+||+|||++.++++++++.++++++++|++++ +|+.... .+.+.+. + +....+. +.+.||++
T Consensus 80 ~~~aD~Vilav~~~~~~~v~~~l~~~l~~~~ivv~~~~~~G~~~~~----~~~l~~~~~~~v~~~~~~~~~~~~~~gpg~ 155 (404)
T 3c7a_A 80 ISGADVVILTVPAFAHEGYFQAMAPYVQDSALIVGLPSQAGFEFQC----RDILGDKAAAVSMMSFETLPWACRIKEFGR 155 (404)
T ss_dssp HTTCSEEEECSCGGGHHHHHHHHTTTCCTTCEEEETTCCTTHHHHH----HHHHGGGGGTSEEEEESSCSEEEEEEETTT
T ss_pred hCCCCEEEEeCchHHHHHHHHHHHhhCCCCcEEEEcCCCccHHHHH----HHHHHhcCCCeEEEEecCchHhhcccCCCc
Confidence 8999999999999999999999999999999999854 4433221 1233322 1 1001223 55678885
Q ss_pred HHHHhhcCCeEEEEecC--CHHHHHHHHHHHhcCCc-e-EEEcCChhHHHHHHHHHHHHHHHHHHHHhc------c----
Q 014700 268 ALELMNKLPTAMVVASK--DRKLANAVQQLLASKHL-R-ISTSSDVTGVEIAGALKNVLAIAAGIVVGM------N---- 333 (420)
Q Consensus 268 a~ev~~g~~t~i~ia~~--d~e~~~~l~~ll~~~g~-~-v~~s~Di~g~e~~~alkNv~Ai~~G~~~gl------~---- 333 (420)
+.++..+.. .+.++.. +.+..+++.++|+..+. . +.+++|+.+.+|+. |++.+..++..+. .
T Consensus 156 ~v~~~~~~~-~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~di~~~~l~~---N~~~~~~~~l~~~~~~~g~~~~~~ 231 (404)
T 3c7a_A 156 KVEVLGTKS-VLAASLIKGTAKTVDPLSTLQMLHGAEPVFRLAKHFLEMLIMS---YSFVHPAILFGRWGSWDGKPVPEA 231 (404)
T ss_dssp EEEEEEECS-EEEEEEECCSSCCSCHHHHHHHHHCSSSEEEECSCHHHHHHTT---CTTHHHHHHHHHHTTCCSCCBSSC
T ss_pred EEEEEEECc-eEEEEEccCCcchHHHHHHHHHHhCCCCceeEcCCEeeeeecC---CceeccHHHHHHHHhhhcCCCCCC
Confidence 443332221 1222211 11122345555555554 3 66899999998874 6655555554222 1
Q ss_pred --cch---hHHHHHHHHHHHHHHHHHHHc-----CCChhhhhhccccchhhhhhcccCCCCccccccccCCCChHHHHHH
Q 014700 334 --LGN---NSMAALVAQGCSEIRWLATKM-----GAKPATITGLSGTGDIMLTCFVNLSRNRTVGVRLGSGEKLDDILSS 403 (420)
Q Consensus 334 --lg~---N~~~al~~~~~~E~~~lA~a~-----Gi~~~t~~~l~g~gdl~~t~~~~~sRn~~~G~~l~~g~~~~~~~~~ 403 (420)
+.. +....++.++++|+.++++++ |++++++ .+++|++.+| +|..++.+.++.++.++
T Consensus 232 ~~~~~~~~~~~~~l~~~~~~E~~~va~a~~~~~~G~~~~~~---~~~~d~~~~~---------~~~~~~~~~s~~~~~~~ 299 (404)
T 3c7a_A 232 PLFYQGIDQATADMLTACSNECKDVANAIMAACPGNDLSDV---KDIYQWYLEY---------YHEDIQDDHDLYHAITT 299 (404)
T ss_dssp CBSGGGCCHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCTTC---CCHHHHHHHH---------STTTBSCCSSHHHHHHT
T ss_pred CccccCCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccC---CCHHHHHHHh---------CCCccCChhhHHHHHHh
Confidence 333 367799999999999999999 9988655 6788888877 33345556666665544
No 25
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=99.88 E-value=9.4e-22 Score=192.27 Aligned_cols=200 Identities=12% Similarity=0.072 Sum_probs=152.3
Q ss_pred hcCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEE
Q 014700 124 LERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (420)
Q Consensus 124 ~~~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiV 203 (420)
|...|||+|||+|.||.++|..|+++| |+|++|+|++++++.+.+.| +..+++++++++ +|+|
T Consensus 12 M~~~~~I~vIG~G~mG~~~A~~l~~~G--~~V~~~dr~~~~~~~~~~~g--------------~~~~~~~~~~~~-aDvv 74 (296)
T 3qha_A 12 TTEQLKLGYIGLGNMGAPMATRMTEWP--GGVTVYDIRIEAMTPLAEAG--------------ATLADSVADVAA-ADLI 74 (296)
T ss_dssp ---CCCEEEECCSTTHHHHHHHHTTST--TCEEEECSSTTTSHHHHHTT--------------CEECSSHHHHTT-SSEE
T ss_pred ccCCCeEEEECcCHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHHHHCC--------------CEEcCCHHHHHh-CCEE
Confidence 333579999999999999999999998 99999999999888888753 456778999888 9999
Q ss_pred EEccCh-hhHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCeEEEECcccHHHHhhcCCeEEEEe
Q 014700 204 LHAMPV-QFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVA 282 (420)
Q Consensus 204 IlaVp~-~~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~~vl~GP~~a~ev~~g~~t~i~ia 282 (420)
|+|||. ..++++++++.+.++++++||++++ ..+.+.+.+.+.+.+. | ..++.+|.+.........+..++.
T Consensus 75 i~~vp~~~~~~~v~~~l~~~l~~g~ivv~~st-~~~~~~~~~~~~~~~~-g-----~~~~~~pv~g~~~~a~~g~l~~~~ 147 (296)
T 3qha_A 75 HITVLDDAQVREVVGELAGHAKPGTVIAIHST-ISDTTAVELARDLKAR-D-----IHIVDAPVSGGAAAAARGELATMV 147 (296)
T ss_dssp EECCSSHHHHHHHHHHHHTTCCTTCEEEECSC-CCHHHHHHHHHHHGGG-T-----CEEEECCEESCHHHHHHTCEEEEE
T ss_pred EEECCChHHHHHHHHHHHHhcCCCCEEEEeCC-CCHHHHHHHHHHHHHc-C-----CEEEeCCCcCCHHHHhcCCccEEe
Confidence 999995 5789999999999999999999875 4555444455555432 2 234555544332221122334455
Q ss_pred cCCHHHHHHHHHHHhcCCceEEEcCChhHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHcCCChh
Q 014700 283 SKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGAKPA 362 (420)
Q Consensus 283 ~~d~e~~~~l~~ll~~~g~~v~~s~Di~g~e~~~alkNv~Ai~~G~~~gl~lg~N~~~al~~~~~~E~~~lA~a~Gi~~~ 362 (420)
+.+++.+++++++|+..+.++++..+.-..+ .+|+.+|........+++|+..+++++|++++
T Consensus 148 gg~~~~~~~~~~ll~~~g~~~~~~g~~g~a~-----------------~~Kl~~N~~~~~~~~~~~E~~~l~~~~G~d~~ 210 (296)
T 3qha_A 148 GADREVYERIKPAFKHWAAVVIHAGEPGAGT-----------------RMKLARNMLTFTSYAAACEAMKLAEAAGLDLQ 210 (296)
T ss_dssp ECCHHHHHHHHHHHHHHEEEEEEEESTTHHH-----------------HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHH
T ss_pred cCCHHHHHHHHHHHHHHcCCeEEcCChhHHH-----------------HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 6688899999999999998888777653333 34456777788888999999999999999999
Q ss_pred hh
Q 014700 363 TI 364 (420)
Q Consensus 363 t~ 364 (420)
++
T Consensus 211 ~~ 212 (296)
T 3qha_A 211 AL 212 (296)
T ss_dssp HH
T ss_pred HH
Confidence 99
No 26
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=99.87 E-value=2.5e-21 Score=188.34 Aligned_cols=224 Identities=21% Similarity=0.219 Sum_probs=165.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEc
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIla 206 (420)
+|||+|||+|.||..+|..|+++| ++|.+|+|++++.+.+.+.| +...++++++++++|+||+|
T Consensus 5 ~m~i~iiG~G~~G~~~a~~l~~~g--~~V~~~~~~~~~~~~~~~~g--------------~~~~~~~~~~~~~~D~vi~~ 68 (299)
T 1vpd_A 5 TMKVGFIGLGIMGKPMSKNLLKAG--YSLVVSDRNPEAIADVIAAG--------------AETASTAKAIAEQCDVIITM 68 (299)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHTT--CEEEEECSCHHHHHHHHHTT--------------CEECSSHHHHHHHCSEEEEC
T ss_pred cceEEEECchHHHHHHHHHHHhCC--CEEEEEeCCHHHHHHHHHCC--------------CeecCCHHHHHhCCCEEEEE
Confidence 479999999999999999999998 89999999999888887753 34556888888899999999
Q ss_pred cC-hhhHHHHH---HHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCeEEEECcccHHHHhhcCCeEEEEe
Q 014700 207 MP-VQFSSSFL---EGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVA 282 (420)
Q Consensus 207 Vp-~~~l~~vl---~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~~vl~GP~~a~ev~~g~~t~i~ia 282 (420)
+| +..++.++ +++.+.++++++||++++|... +.+.+.+.+.+. ...++..|..............++.
T Consensus 69 v~~~~~~~~~~~~~~~l~~~l~~~~~vv~~s~~~~~-~~~~l~~~~~~~------g~~~~~~pv~~~~~~~~~~~~~~~~ 141 (299)
T 1vpd_A 69 LPNSPHVKEVALGENGIIEGAKPGTVLIDMSSIAPL-ASREISDALKAK------GVEMLDAPVSGGEPKAIDGTLSVMV 141 (299)
T ss_dssp CSSHHHHHHHHHSTTCHHHHCCTTCEEEECSCCCHH-HHHHHHHHHHTT------TCEEEECCEESHHHHHHHTCEEEEE
T ss_pred CCCHHHHHHHHhCcchHhhcCCCCCEEEECCCCCHH-HHHHHHHHHHHc------CCeEEEecCCCCHhHHhcCCEEEEe
Confidence 99 56788888 6788888899999999987542 223344444331 2334455554332221112223344
Q ss_pred cCCHHHHHHHHHHHhcCCceEEEcCChhHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHcCCChh
Q 014700 283 SKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGAKPA 362 (420)
Q Consensus 283 ~~d~e~~~~l~~ll~~~g~~v~~s~Di~g~e~~~alkNv~Ai~~G~~~gl~lg~N~~~al~~~~~~E~~~lA~a~Gi~~~ 362 (420)
+.+++..++++++|+..|+.+++.++.....|.|+ .+|....++..++.|+..++++.|++++
T Consensus 142 ~~~~~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl-----------------~~n~~~~~~~~~~~Ea~~l~~~~G~~~~ 204 (299)
T 1vpd_A 142 GGDKAIFDKYYDLMKAMAGSVVHTGDIGAGNVTKL-----------------ANQVIVALNIAAMSEALTLATKAGVNPD 204 (299)
T ss_dssp ESCHHHHHHHHHHHHTTEEEEEEEESTTHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHHTTCCHH
T ss_pred CCCHHHHHHHHHHHHHHcCCeEEeCCcCHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 55888899999999999999888877655555443 4556677888999999999999999999
Q ss_pred hhhhccccch-----hhhhhcccCCCCcccccc
Q 014700 363 TITGLSGTGD-----IMLTCFVNLSRNRTVGVR 390 (420)
Q Consensus 363 t~~~l~g~gd-----l~~t~~~~~sRn~~~G~~ 390 (420)
++.++.+.++ +...+.+.++++++.|+.
T Consensus 205 ~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~g~~ 237 (299)
T 1vpd_A 205 LVYQAIRGGLAGSTVLDAKAPMVMDRNFKPGFR 237 (299)
T ss_dssp HHHHHHTTSTTCCHHHHHHHHHHHTTCCCCSSB
T ss_pred HHHHHHHccCCCCHHHHHhhhHhhcCCCCCCCC
Confidence 9988664443 223456677788777664
No 27
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=99.87 E-value=1.9e-21 Score=190.47 Aligned_cols=226 Identities=14% Similarity=0.115 Sum_probs=163.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEc
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIla 206 (420)
+|||+|||+|.||.+||..|+++| ++|++|+|++++++.+.+.|.. ..+++++++++++|+||+|
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G--~~V~~~dr~~~~~~~~~~~g~~-------------~~~~~~~e~~~~aDvvi~~ 71 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAG--LSTWGADLNPQACANLLAEGAC-------------GAAASAREFAGVVDALVIL 71 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHHTTCS-------------EEESSSTTTTTTCSEEEEC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC--CeEEEEECCHHHHHHHHHcCCc-------------cccCCHHHHHhcCCEEEEE
Confidence 579999999999999999999998 9999999999999998876521 2256788888999999999
Q ss_pred cCh-hhHHHHH---HHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCeEEEECcccHHHHhhcCCeEEEEe
Q 014700 207 MPV-QFSSSFL---EGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVA 282 (420)
Q Consensus 207 Vp~-~~l~~vl---~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~~vl~GP~~a~ev~~g~~t~i~ia 282 (420)
||. ..++.++ +++.+.++++++||++++ ..+.+.+.+.+.+.+. | ..++..|...........+..++.
T Consensus 72 vp~~~~~~~v~~~~~~l~~~l~~g~ivv~~st-~~~~~~~~~~~~~~~~-g-----~~~~~~pv~g~~~~a~~g~l~~~~ 144 (303)
T 3g0o_A 72 VVNAAQVRQVLFGEDGVAHLMKPGSAVMVSST-ISSADAQEIAAALTAL-N-----LNMLDAPVSGGAVKAAQGEMTVMA 144 (303)
T ss_dssp CSSHHHHHHHHC--CCCGGGSCTTCEEEECSC-CCHHHHHHHHHHHHTT-T-----CEEEECCEESCHHHHHTTCEEEEE
T ss_pred CCCHHHHHHHHhChhhHHhhCCCCCEEEecCC-CCHHHHHHHHHHHHHc-C-----CeEEeCCCCCChhhhhcCCeEEEe
Confidence 997 4688888 788888999999999875 5554444444444432 2 234445544332222233444555
Q ss_pred cCCHHHHHHHHHHHhcCCceEEEcCC-hhHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHcCCCh
Q 014700 283 SKDRKLANAVQQLLASKHLRISTSSD-VTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGAKP 361 (420)
Q Consensus 283 ~~d~e~~~~l~~ll~~~g~~v~~s~D-i~g~e~~~alkNv~Ai~~G~~~gl~lg~N~~~al~~~~~~E~~~lA~a~Gi~~ 361 (420)
+.+++.+++++++|+..+.+++..++ +-..++.| +.+|...++...+++|+..++++.|+++
T Consensus 145 gg~~~~~~~~~~ll~~~g~~~~~~~~~~g~a~~~K-----------------l~~N~~~~~~~~~~~Ea~~l~~~~G~d~ 207 (303)
T 3g0o_A 145 SGSEAAFTRLKPVLDAVASNVYRISDTPGAGSTVK-----------------IIHQLLAGVHIAAAAEAMALAARAGIPL 207 (303)
T ss_dssp ECCHHHHHHHHHHHHHHEEEEEEEESSTTHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHHHTTCCH
T ss_pred CCCHHHHHHHHHHHHHHCCCEEECCCCCcHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 66889999999999999988877766 54444444 4556666777889999999999999999
Q ss_pred hhhhhccccch----h-hhhhcccCCCCccccccc
Q 014700 362 ATITGLSGTGD----I-MLTCFVNLSRNRTVGVRL 391 (420)
Q Consensus 362 ~t~~~l~g~gd----l-~~t~~~~~sRn~~~G~~l 391 (420)
+++.++.+.+. + .......+.++|..|+.+
T Consensus 208 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 242 (303)
T 3g0o_A 208 DVMYDVVTHAAGNSWMFENRMQHVVDGDYTPRSAV 242 (303)
T ss_dssp HHHHHHHTTSTTCCHHHHHHHHHHHTTCCCCSSBH
T ss_pred HHHHHHHHhcccCCHHHHhhhHHHhcCCCCCCCch
Confidence 99988653321 1 111122345677666643
No 28
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=99.87 E-value=1.1e-21 Score=203.74 Aligned_cols=241 Identities=15% Similarity=0.104 Sum_probs=181.4
Q ss_pred hcCCCeEEEEcccHHHHHHHHHHHhc-CCCC-eEEEEeCCHH----HHHHHHHhcCCCC--CCCCCC-------CCCceE
Q 014700 124 LERTNKVVVLGGGSFGTAMAAHVANK-KSQL-KVYMLMRDPA----VCQSINEKHCNCR--YFPEQK-------LPENVI 188 (420)
Q Consensus 124 ~~~~mkI~IIGaGamG~alA~~La~a-G~~~-~V~l~~r~~~----~~~~i~~~g~~~~--~l~~~~-------l~~~i~ 188 (420)
+..+|||+|||+|.||+++|..|+++ | | +|++||++++ +++.+++.. ... |.++.. ...++.
T Consensus 15 ~~~~mkIaVIGlG~mG~~lA~~la~~~G--~~~V~~~D~~~~~~~~kv~~l~~g~-~~i~~~e~gl~~l~~~~~~~g~l~ 91 (478)
T 3g79_A 15 RGPIKKIGVLGMGYVGIPAAVLFADAPC--FEKVLGFQRNSKSSGYKIEMLNRGE-SPLKGEEPGLEELIGKVVKAGKFE 91 (478)
T ss_dssp HCSCCEEEEECCSTTHHHHHHHHHHSTT--CCEEEEECCCCTTTTTHHHHHTTTC-CCSSCCGGGHHHHHHHHHHTTCEE
T ss_pred cCCCCEEEEECcCHHHHHHHHHHHHhCC--CCeEEEEECChhHhHHHHHHHHhcC-CCccccCCCHHHHHHhhcccCCeE
Confidence 45678999999999999999999999 9 9 9999999999 999998743 333 444432 145688
Q ss_pred EeCCHHHhccCCcEEEEccChh------------hHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHH-HHhCCC
Q 014700 189 ATTDAKTALLGADYCLHAMPVQ------------FSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIP-QALRNP 255 (420)
Q Consensus 189 a~td~~eal~~aDiVIlaVp~~------------~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~-~~lg~~ 255 (420)
++++ .+++++||+||+|||+. ++..+++++.++++++++||..+ ++.+.+.+.+.+.+. +..|..
T Consensus 92 ~ttd-~ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~S-Tv~pgtt~~v~~~ile~~~g~~ 169 (478)
T 3g79_A 92 CTPD-FSRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLES-TITPGTTEGMAKQILEEESGLK 169 (478)
T ss_dssp EESC-GGGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECS-CCCTTTTTTHHHHHHHHHHCCC
T ss_pred EeCc-HHHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeC-CCChHHHHHHHHHHHHHhcCCC
Confidence 8888 57789999999999965 27788889999999999988776 799888777776443 444531
Q ss_pred -CCCeEEEECcccHHHHh----hcCCeEEEEecCCHHHHHHHHHHHhcC-CceEEEcCChhHHHHHHHHHHHHHHHHHHH
Q 014700 256 -RQPFIALSGPSFALELM----NKLPTAMVVASKDRKLANAVQQLLASK-HLRISTSSDVTGVEIAGALKNVLAIAAGIV 329 (420)
Q Consensus 256 -~~~~~vl~GP~~a~ev~----~g~~t~i~ia~~d~e~~~~l~~ll~~~-g~~v~~s~Di~g~e~~~alkNv~Ai~~G~~ 329 (420)
...+.++++|.+..+.. ...+..+ +++.+++.+++++++|+.. +..++...|+...|+.|+
T Consensus 170 ~~~d~~v~~~Pe~~~~G~a~~~~~~~~~I-v~G~~~~~~~~~~~ly~~~~~~~~~~~~~~~~aE~~Kl------------ 236 (478)
T 3g79_A 170 AGEDFALAHAPERVMVGRLLKNIREHDRI-VGGIDEASTKRAVELYSPVLTVGQVIPMSATAAEVTKT------------ 236 (478)
T ss_dssp BTTTBEEEECCCCCCTTSHHHHHHHSCEE-EEESSHHHHHHHHHHHGGGCSSCCEEEEEHHHHHHHHH------------
T ss_pred cCCceeEEeCCccCCccchhhhhcCCcEE-EEeCCHHHHHHHHHHHhhhccCCeEEeCCHHHHHHHHH------------
Confidence 13578999998875421 1123344 5677888889999999998 677777788777666654
Q ss_pred HhcccchhHHHHHHHHHHHHHHHHHHHcCCChhhhhhccccchhhhhhcccCCCCccccccc
Q 014700 330 VGMNLGNNSMAALVAQGCSEIRWLATKMGAKPATITGLSGTGDIMLTCFVNLSRNRTVGVRL 391 (420)
Q Consensus 330 ~gl~lg~N~~~al~~~~~~E~~~lA~a~Gi~~~t~~~l~g~gdl~~t~~~~~sRn~~~G~~l 391 (420)
.+|...++....++|+..+|+++|+|++.+++..+..... ....+.+.+|+.+
T Consensus 237 -----~~N~~~a~~Ia~~nE~~~l~e~~GiD~~~v~~~~~~~~~~----ri~~~~~~PG~G~ 289 (478)
T 3g79_A 237 -----AENTFRDLQIAAINQLALYCEAMGINVYDVRTGVDSLKGE----GITRAVLWPGAGV 289 (478)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSCCS----SSCCCCCCCCSCC
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHCCCchh----hhccccCCCCCCc
Confidence 4566778888899999999999999999998876543210 1234556666643
No 29
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=99.87 E-value=3e-21 Score=187.47 Aligned_cols=224 Identities=17% Similarity=0.147 Sum_probs=163.6
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEcc
Q 014700 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAM 207 (420)
Q Consensus 128 mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIlaV 207 (420)
|||+|||+|.||.++|..|+++| ++|++|+|++++++.+.+.+ +..+++++++++++|+||+||
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G--~~V~~~dr~~~~~~~~~~~g--------------~~~~~~~~~~~~~aDvvi~~v 65 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAG--CSVTIWNRSPEKAEELAALG--------------AERAATPCEVVESCPVTFAML 65 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSGGGGHHHHHTT--------------CEECSSHHHHHHHCSEEEECC
T ss_pred CEEEEEeecHHHHHHHHHHHHCC--CeEEEEcCCHHHHHHHHHCC--------------CeecCCHHHHHhcCCEEEEEc
Confidence 79999999999999999999998 99999999999888888753 356678999899999999999
Q ss_pred C-hhhHHHHH---HHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCeEEEECcccHHHHhhcCCeEEEEec
Q 014700 208 P-VQFSSSFL---EGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVAS 283 (420)
Q Consensus 208 p-~~~l~~vl---~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~~vl~GP~~a~ev~~g~~t~i~ia~ 283 (420)
| +..+++++ +++.+.++++++||+++ ++.+.+.+.+.+.+.+. |. .++..|...........+..++.+
T Consensus 66 p~~~~~~~v~~~~~~l~~~l~~~~~vi~~s-t~~~~~~~~~~~~~~~~-g~-----~~~~~pv~g~~~~a~~g~l~~~~g 138 (287)
T 3pef_A 66 ADPAAAEEVCFGKHGVLEGIGEGRGYVDMS-TVDPATSQRIGVAVVAK-GG-----RFLEAPVSGSKKPAEDGTLIILAA 138 (287)
T ss_dssp SSHHHHHHHHHSTTCHHHHCCTTCEEEECS-CCCHHHHHHHHHHHHHT-TC-----EEEECCEECCHHHHHHTCEEEEEE
T ss_pred CCHHHHHHHHcCcchHhhcCCCCCEEEeCC-CCCHHHHHHHHHHHHHh-CC-----EEEECCCcCCHHHHhcCCEEEEEe
Confidence 9 56899999 88888899999999886 46665555555555543 32 233334332221111123344555
Q ss_pred CCHHHHHHHHHHHhcCCceEEEcCChhHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHcCCChhh
Q 014700 284 KDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGAKPAT 363 (420)
Q Consensus 284 ~d~e~~~~l~~ll~~~g~~v~~s~Di~g~e~~~alkNv~Ai~~G~~~gl~lg~N~~~al~~~~~~E~~~lA~a~Gi~~~t 363 (420)
.+++.+++++++|+..+.++++.++....++.| +.+|........+++|+..++++.|+++++
T Consensus 139 g~~~~~~~~~~ll~~~g~~~~~~g~~g~~~~~K-----------------l~~N~~~~~~~~~~~E~~~l~~~~G~d~~~ 201 (287)
T 3pef_A 139 GDRNLYDEAMPGFEKMGKKIIHLGDVGKGAEMK-----------------LVVNMVMGGMMACFCEGLALGEKAGLATDA 201 (287)
T ss_dssp ECHHHHHHHHHHHHHHEEEEEECSSTTHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHHHTTCCHHH
T ss_pred CCHHHHHHHHHHHHHhCCCeEEeCCCCHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 678899999999999998888887754444444 455666677788999999999999999999
Q ss_pred hhhccccch----h-hhhhcccCCCCccccccc
Q 014700 364 ITGLSGTGD----I-MLTCFVNLSRNRTVGVRL 391 (420)
Q Consensus 364 ~~~l~g~gd----l-~~t~~~~~sRn~~~G~~l 391 (420)
+.+..+.+. + .........++|..|+.+
T Consensus 202 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 234 (287)
T 3pef_A 202 ILDVIGAGAMANPMFALKGGLIRDRNFAPAFPL 234 (287)
T ss_dssp HHHHHHHSTTCCHHHHHHHHHHHTTCCCCSSBH
T ss_pred HHHHHHhcccccHHHHHHhhhhhcCCCCCCCch
Confidence 988653321 1 111122345667666643
No 30
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=99.87 E-value=7.8e-21 Score=185.58 Aligned_cols=202 Identities=15% Similarity=0.196 Sum_probs=153.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEc
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIla 206 (420)
||||+|||+|.||.++|..|+++| ++|++|+|++++++.+.+.| +..+++++++++++|+||+|
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~G--~~V~~~d~~~~~~~~~~~~g--------------~~~~~~~~~~~~~aDvvi~~ 66 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKAG--YLLNVFDLVQSAVDGLVAAG--------------ASAARSARDAVQGADVVISM 66 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTT--CEEEEECSSHHHHHHHHHTT--------------CEECSSHHHHHTTCSEEEEC
T ss_pred CCEEEEEeecHHHHHHHHHHHhCC--CeEEEEcCCHHHHHHHHHCC--------------CeEcCCHHHHHhCCCeEEEE
Confidence 689999999999999999999998 99999999999998888754 35667899999999999999
Q ss_pred cC-hhhHHHHHH---HhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCeEEEECcccHHHHhhcCCeEEEEe
Q 014700 207 MP-VQFSSSFLE---GISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVA 282 (420)
Q Consensus 207 Vp-~~~l~~vl~---~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~~vl~GP~~a~ev~~g~~t~i~ia 282 (420)
|| ...+++++. ++.+.++++++||++++ ..+.+.+.+.+.+.+. |. .++..|...............+.
T Consensus 67 vp~~~~~~~v~~~~~~~~~~l~~~~~vi~~st-~~~~~~~~l~~~~~~~-g~-----~~~~~pv~~~~~~~~~g~l~~~~ 139 (302)
T 2h78_A 67 LPASQHVEGLYLDDDGLLAHIAPGTLVLECST-IAPTSARKIHAAARER-GL-----AMLDAPVSGGTAGAAAGTLTFMV 139 (302)
T ss_dssp CSCHHHHHHHHHSSSCGGGSSCSSCEEEECSC-CCHHHHHHHHHHHHHT-TC-----CEEECCEESCHHHHHHTCEEEEE
T ss_pred CCCHHHHHHHHcCchhHHhcCCCCcEEEECCC-CCHHHHHHHHHHHHHc-CC-----EEEEEEccCChhhHhcCCceEEe
Confidence 98 567899998 88888999999998875 4444434445555442 22 23444544433222222333445
Q ss_pred cCCHHHHHHHHHHHhcCCceEEEcCChhHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHcCCChh
Q 014700 283 SKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGAKPA 362 (420)
Q Consensus 283 ~~d~e~~~~l~~ll~~~g~~v~~s~Di~g~e~~~alkNv~Ai~~G~~~gl~lg~N~~~al~~~~~~E~~~lA~a~Gi~~~ 362 (420)
+.+++..++++++|+..+.++++..+....+|.|++. |........++.|+..++++.|++++
T Consensus 140 ~g~~~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~-----------------n~~~~~~~~~~~Ea~~l~~~~G~~~~ 202 (302)
T 2h78_A 140 GGDAEALEKARPLFEAMGRNIFHAGPDGAGQVAKVCN-----------------NQLLAVLMIGTAEAMALGVANGLEAK 202 (302)
T ss_dssp ESCHHHHHHHHHHHHHHEEEEEEEESTTHHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHTTCCHH
T ss_pred CCCHHHHHHHHHHHHHhCCCeEEcCCccHHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 5688999999999999998888887765556655544 44555677789999999999999999
Q ss_pred hhhhcc
Q 014700 363 TITGLS 368 (420)
Q Consensus 363 t~~~l~ 368 (420)
++.+..
T Consensus 203 ~~~~~~ 208 (302)
T 2h78_A 203 VLAEIM 208 (302)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888753
No 31
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=99.87 E-value=1.1e-20 Score=194.42 Aligned_cols=241 Identities=16% Similarity=0.138 Sum_probs=179.6
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCC--C-----CCceEEeCCHHHhccCC
Q 014700 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQK--L-----PENVIATTDAKTALLGA 200 (420)
Q Consensus 128 mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~--l-----~~~i~a~td~~eal~~a 200 (420)
|||+|||+|+||.++|..|+++| ++|++|+|++++++.+++.+ ...+.++.. + ..++.+++++++++++|
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G--~~V~~~d~~~~~~~~l~~~~-~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~a 77 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARG--HEVIGVDVSSTKIDLINQGK-SPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDS 77 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTT--CEEEEECSCHHHHHHHHTTC-CSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTC
T ss_pred CEEEEECCCHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHhCCC-CCcCCCCHHHHHHhhcccCceEEeCCHHHHhccC
Confidence 69999999999999999999998 89999999999999998754 333333321 0 22478889998888999
Q ss_pred cEEEEccChhh----------HHHHHHHhhhcCCC---CCeEEEeccCCCcch-hhhHHHHHHHHhCCCC-CCeEEEECc
Q 014700 201 DYCLHAMPVQF----------SSSFLEGISDYVDP---GLPFISLSKGLELNT-LRMMSQIIPQALRNPR-QPFIALSGP 265 (420)
Q Consensus 201 DiVIlaVp~~~----------l~~vl~~i~~~l~~---~~iVVs~snGi~~~t-~~~~se~l~~~lg~~~-~~~~vl~GP 265 (420)
|+||+|||... ++++++++.+++++ +++||..+ ++.+.+ .+.+.+.+.+..+... ..+.+.++|
T Consensus 78 DvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~S-tv~~g~t~~~l~~~l~~~~g~~~~~~~~v~~~P 156 (436)
T 1mv8_A 78 DVSFICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVRS-TVLPGTVNNVVIPLIEDCSGKKAGVDFGVGTNP 156 (436)
T ss_dssp SEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEECS-CCCTTHHHHTHHHHHHHHHSCCBTTTBEEEECC
T ss_pred CEEEEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEEeC-CcCCCchHHHHHHHHHHhcCcccCCcEEEEECc
Confidence 99999999765 89999999998888 88888775 455555 5666677766544321 245677888
Q ss_pred ccHHHHh----hcCCeEEEEecCCHHHHHHHHHHHhcCCceEEEcCChhHHHHHHHHHHHHHHHHHHHHhcccchhHHHH
Q 014700 266 SFALELM----NKLPTAMVVASKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAA 341 (420)
Q Consensus 266 ~~a~ev~----~g~~t~i~ia~~d~e~~~~l~~ll~~~g~~v~~s~Di~g~e~~~alkNv~Ai~~G~~~gl~lg~N~~~a 341 (420)
.+..+.. ...+..+++++.+++..+.++++|+..+..++. .|+...+|.|++. |...+
T Consensus 157 e~~~~G~~~~~~~~~~~iv~G~~~~~~~~~~~~l~~~~~~~v~~-~~~~~ae~~Kl~~-----------------N~~~a 218 (436)
T 1mv8_A 157 EFLRESTAIKDYDFPPMTVIGELDKQTGDLLEEIYRELDAPIIR-KTVEVAEMIKYTC-----------------NVWHA 218 (436)
T ss_dssp CCCCTTSHHHHHHSCSCEEEEESSHHHHHHHHHHHTTSSSCEEE-EEHHHHHHHHHHH-----------------HHHHH
T ss_pred ccccccccchhccCCCEEEEEcCCHHHHHHHHHHHhccCCCEEc-CCHHHHHHHHHHH-----------------HHHHH
Confidence 8765421 123444666766688889999999999887766 7887777776544 44566
Q ss_pred HHHHHHHHHHHHHHHcCCChhhhhhccccchhhhhhcccCCCCccccccccCC
Q 014700 342 LVAQGCSEIRWLATKMGAKPATITGLSGTGDIMLTCFVNLSRNRTVGVRLGSG 394 (420)
Q Consensus 342 l~~~~~~E~~~lA~a~Gi~~~t~~~l~g~gdl~~t~~~~~sRn~~~G~~l~~g 394 (420)
+....++|+..+|+++|++++++.+..+....+. ..+|++.+|..++..
T Consensus 219 ~~ia~~nE~~~l~~~~Gid~~~v~~~~~~~~r~~----~~~~~~~pg~g~gg~ 267 (436)
T 1mv8_A 219 AKVTFANEIGNIAKAVGVDGREVMDVICQDHKLN----LSRYYMRPGFAFGGS 267 (436)
T ss_dssp HHHHHHHHHHHHHHHTTSCHHHHHHHHTTCTTTT----TSSTTCSCCSCCCSS
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHhcCCCCCC----CcccCCCCcccccCc
Confidence 7788999999999999999999988777533211 015777887655543
No 32
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=99.86 E-value=1.1e-21 Score=193.83 Aligned_cols=221 Identities=14% Similarity=0.098 Sum_probs=161.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCH-------HHHHHHHHhcCCCCCCCCCCCCCceEEeC-CHHHhcc
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP-------AVCQSINEKHCNCRYFPEQKLPENVIATT-DAKTALL 198 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~-------~~~~~i~~~g~~~~~l~~~~l~~~i~a~t-d~~eal~ 198 (420)
+|||+|||+|.||.++|..|+++|. ++|++|+|++ +..+.+.+.| + .+ +++++++
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~-~~V~~~dr~~~~~~~~~~~~~~~~~~g--------------~--~~~s~~e~~~ 86 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNA-ARLAAYDLRFNDPAASGALRARAAELG--------------V--EPLDDVAGIA 86 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTC-SEEEEECGGGGCTTTHHHHHHHHHHTT--------------C--EEESSGGGGG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCC-CeEEEEeCCCccccchHHHHHHHHHCC--------------C--CCCCHHHHHh
Confidence 5899999999999999999999862 7999999997 4455555432 2 34 6778889
Q ss_pred CCcEEEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCeEEEECcccHHHHhhcCCeE
Q 014700 199 GADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTA 278 (420)
Q Consensus 199 ~aDiVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~~vl~GP~~a~ev~~g~~t~ 278 (420)
+||+||+|||.....+.++++.+.++++++||+++ ++.+.+.+.+.+.+.+. |..... +.++||..+. .+..+
T Consensus 87 ~aDvVi~avp~~~~~~~~~~i~~~l~~~~ivv~~s-t~~p~~~~~~~~~l~~~-g~~~~d-~pv~g~~~a~---~g~l~- 159 (317)
T 4ezb_A 87 CADVVLSLVVGAATKAVAASAAPHLSDEAVFIDLN-SVGPDTKALAAGAIATG-KGSFVE-GAVMARVPPY---AEKVP- 159 (317)
T ss_dssp GCSEEEECCCGGGHHHHHHHHGGGCCTTCEEEECC-SCCHHHHHHHHHHHHTS-SCEEEE-EEECSCSTTT---GGGSE-
T ss_pred cCCEEEEecCCHHHHHHHHHHHhhcCCCCEEEECC-CCCHHHHHHHHHHHHHc-CCeEEe-ccCCCCchhh---cCCEE-
Confidence 99999999999888888899999999999999987 57776656666666543 321111 2456665432 23333
Q ss_pred EEEecCCHHHHHHHHHHHhcCCceEEEcCC-hhHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHc
Q 014700 279 MVVASKDRKLANAVQQLLASKHLRISTSSD-VTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKM 357 (420)
Q Consensus 279 i~ia~~d~e~~~~l~~ll~~~g~~v~~s~D-i~g~e~~~alkNv~Ai~~G~~~gl~lg~N~~~al~~~~~~E~~~lA~a~ 357 (420)
+++++.+. ++++++|+..+.+++..++ +-.. +.+|+.+|...+....+++|+..+++++
T Consensus 160 i~vgg~~~---~~~~~ll~~~g~~v~~~g~~~g~a-----------------~~~Kl~~N~~~~~~~~~~~E~~~la~~~ 219 (317)
T 4ezb_A 160 ILVAGRRA---VEVAERLNALGMNLEAVGETPGQA-----------------SSLKMIRSVMIKGVEALLIEALSSAERA 219 (317)
T ss_dssp EEEESTTH---HHHHHHHHTTTCEEEEEESSTTHH-----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEeCChH---HHHHHHHHHhCCCeEEeCCCcCHH-----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 44555443 8899999999998887776 5333 3445667777788889999999999999
Q ss_pred CCChhhhhhcccc---chhhhhhcccCCCCccccccc
Q 014700 358 GAKPATITGLSGT---GDIMLTCFVNLSRNRTVGVRL 391 (420)
Q Consensus 358 Gi~~~t~~~l~g~---gdl~~t~~~~~sRn~~~G~~l 391 (420)
|++++.+..+.+. .+....+....+|++..|+.+
T Consensus 220 Gid~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~ 256 (317)
T 4ezb_A 220 GVTERILDSVQETFPGLDWRDVADYYLSRTFEHGARR 256 (317)
T ss_dssp TCHHHHHHHHHHHSTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHhcCccccHHHhhhhhhcCCCCCCcch
Confidence 9999765554422 133334555678888888875
No 33
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=99.86 E-value=1.6e-22 Score=195.15 Aligned_cols=235 Identities=14% Similarity=0.149 Sum_probs=158.3
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEcc
Q 014700 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAM 207 (420)
Q Consensus 128 mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIlaV 207 (420)
|||+|||+|+||+++|..|+++| ++|++|+|++++.+.+...+.+ +..++..+. .++. ++++++|+||+||
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g--~~V~~~~r~~~~~~~l~~~~~~-----~~~~~~~~~-~~~~-~~~~~~d~vi~~v 71 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQG--HEVQGWLRVPQPYCSVNLVETD-----GSIFNESLT-ANDP-DFLATSDLLLVTL 71 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSCCSEEEEEEECTT-----SCEEEEEEE-ESCH-HHHHTCSEEEECS
T ss_pred CeEEEECcCHHHHHHHHHHHhCC--CCEEEEEcCccceeeEEEEcCC-----Cceeeeeee-ecCc-cccCCCCEEEEEe
Confidence 69999999999999999999998 8999999987654333222110 100111122 2444 5578999999999
Q ss_pred ChhhHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCeEEEECcccHHHHhhcCCeEEEEecCCHH
Q 014700 208 PVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVASKDRK 287 (420)
Q Consensus 208 p~~~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~~vl~GP~~a~ev~~g~~t~i~ia~~d~e 287 (420)
|++.++++++++.++++++++||+++||+... +.+.+.+.+.+.......+.+.|| .+.+...+. ..+...+.+.+
T Consensus 72 ~~~~~~~v~~~l~~~l~~~~~vv~~~~g~~~~--~~l~~~~~~~~~g~~~~~~~~~~p-~~~~~~~g~-~~i~~~~~~~~ 147 (291)
T 1ks9_A 72 KAWQVSDAVKSLASTLPVTTPILLIHNGMGTI--EELQNIQQPLLMGTTTHAARRDGN-VIIHVANGI-THIGPARQQDG 147 (291)
T ss_dssp CGGGHHHHHHHHHTTSCTTSCEEEECSSSCTT--GGGTTCCSCEEEEEECCEEEEETT-EEEEEECCC-EEEEESSGGGT
T ss_pred cHHhHHHHHHHHHhhCCCCCEEEEecCCCCcH--HHHHHhcCCeEEEEEeEccEEcCC-EEEEecccc-eEEccCCCCcc
Confidence 99999999999999999999999999998642 122222221111100113457888 544433343 22222233456
Q ss_pred HHHHHHHHHhcCCceEEEcCChhHHHHHHHHHHHHHHHHHHHHhcccch-hHHHHHHHHHHHHHHHHHHHcCCCh--hhh
Q 014700 288 LANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGN-NSMAALVAQGCSEIRWLATKMGAKP--ATI 364 (420)
Q Consensus 288 ~~~~l~~ll~~~g~~v~~s~Di~g~e~~~alkNv~Ai~~G~~~gl~lg~-N~~~al~~~~~~E~~~lA~a~Gi~~--~t~ 364 (420)
..++++++|+..|+.+++.+|+.+..|.|++.|..........+...+. .....++.+++.|+..+++++|+++ +.+
T Consensus 148 ~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~n~~~n~~tal~~~~~g~~~~~~~~~~~~~~E~~~va~a~G~~~~~~~~ 227 (291)
T 1ks9_A 148 DYSYLADILQTVLPDVAWHNNIRAELWRKLAVNCVINPLTAIWNCPNGELRHHPQEIMQICEEVAAVIEREGHHTSAEDL 227 (291)
T ss_dssp TCTHHHHHHHTTSSCEEECTTHHHHHHHHHHHHHHHHHHHHHTTCCGGGGGGCHHHHHHHHHHHHHHHHHHTCCCCHHHH
T ss_pred hHHHHHHHHHhcCCCCeecHHHHHHHHHHHeeeeeecHHHHHHCCCchHHHhHHHHHHHHHHHHHHHHHHcCCCCCHHHH
Confidence 6789999999999999999999999999998887655544444433321 0024788999999999999999986 333
Q ss_pred hhccccchhhhhh
Q 014700 365 TGLSGTGDIMLTC 377 (420)
Q Consensus 365 ~~l~g~gdl~~t~ 377 (420)
. .++.++..++
T Consensus 228 ~--~~~~~~~~~~ 238 (291)
T 1ks9_A 228 R--DYVMQVIDAT 238 (291)
T ss_dssp H--HHHHHHHHHT
T ss_pred H--HHHHHHHhcC
Confidence 2 3345555444
No 34
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=99.86 E-value=2.1e-20 Score=181.96 Aligned_cols=227 Identities=15% Similarity=0.189 Sum_probs=163.6
Q ss_pred cCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEE
Q 014700 125 ERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (420)
Q Consensus 125 ~~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVI 204 (420)
..+|||+|||+|.||.++|..|+++| ++|++|+|++++.+.+.+.+ +...++++++++++|+||
T Consensus 2 ~~~~~i~iiG~G~~G~~~a~~l~~~g--~~V~~~~~~~~~~~~~~~~g--------------~~~~~~~~~~~~~~D~vi 65 (301)
T 3cky_A 2 EKSIKIGFIGLGAMGKPMAINLLKEG--VTVYAFDLMEANVAAVVAQG--------------AQACENNQKVAAASDIIF 65 (301)
T ss_dssp --CCEEEEECCCTTHHHHHHHHHHTT--CEEEEECSSHHHHHHHHTTT--------------CEECSSHHHHHHHCSEEE
T ss_pred CCCCEEEEECccHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHHHHCC--------------CeecCCHHHHHhCCCEEE
Confidence 44689999999999999999999998 89999999999888877643 345568888888999999
Q ss_pred EccC-hhhHHHHHH---HhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCeEEEECcccHHHHhhcCCeEEE
Q 014700 205 HAMP-VQFSSSFLE---GISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMV 280 (420)
Q Consensus 205 laVp-~~~l~~vl~---~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~~vl~GP~~a~ev~~g~~t~i~ 280 (420)
+|+| +..++.++. ++.+.++++++||++++|.. .+.+.+.+.+.+. + +.++..|....+.........+
T Consensus 66 ~~vp~~~~~~~v~~~~~~l~~~l~~~~~vv~~~~~~~-~~~~~l~~~~~~~-g-----~~~~~~p~~~~~~~a~~g~~~~ 138 (301)
T 3cky_A 66 TSLPNAGIVETVMNGPGGVLSACKAGTVIVDMSSVSP-SSTLKMAKVAAEK-G-----IDYVDAPVSGGTKGAEAGTLTI 138 (301)
T ss_dssp ECCSSHHHHHHHHHSTTCHHHHSCTTCEEEECCCCCH-HHHHHHHHHHHHT-T-----CEEEECCEESHHHHHHHTCEEE
T ss_pred EECCCHHHHHHHHcCcchHhhcCCCCCEEEECCCCCH-HHHHHHHHHHHHc-C-----CeEEEccCCCCHHHHHcCCeEE
Confidence 9997 566888885 78888889999999998763 2223444444432 2 2234455544332211122223
Q ss_pred EecCCHHHHHHHHHHHhcCCceEEEcCChhHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHcCCC
Q 014700 281 VASKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGAK 360 (420)
Q Consensus 281 ia~~d~e~~~~l~~ll~~~g~~v~~s~Di~g~e~~~alkNv~Ai~~G~~~gl~lg~N~~~al~~~~~~E~~~lA~a~Gi~ 360 (420)
+.+.+++..+.++++|+..|+.+++..+.....|.|+ .+|....++..++.|+..+++++|++
T Consensus 139 ~~~g~~~~~~~v~~ll~~~g~~~~~~~~~g~~~~~Kl-----------------~~N~~~~~~~~~~~Ea~~l~~~~G~~ 201 (301)
T 3cky_A 139 MVGASEAVFEKIQPVLSVIGKDIYHVGDTGAGDAVKI-----------------VNNLLLGCNMASLAEALVLGVKCGLK 201 (301)
T ss_dssp EEESCHHHHHHHHHHHHHHEEEEEEEESTTHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred EECCCHHHHHHHHHHHHHhcCCEEEeCCCCHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 3445888899999999999998877766544445443 45556777888999999999999999
Q ss_pred hhhhhhcccc---ch--hhhhhc-ccCCCCccccccc
Q 014700 361 PATITGLSGT---GD--IMLTCF-VNLSRNRTVGVRL 391 (420)
Q Consensus 361 ~~t~~~l~g~---gd--l~~t~~-~~~sRn~~~G~~l 391 (420)
++++.++... ++ +..++. +.++||++.|+.+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~ 238 (301)
T 3cky_A 202 PETMQEIIGKSSGRSYAMEAKMEKFIMSGDFAGGFAM 238 (301)
T ss_dssp HHHHHHHHHTSTTCBHHHHHHCCCCCCTCCCSSSSBH
T ss_pred HHHHHHHHHcCCCCCHHHHHhhhhhhhcCCCCCCccH
Confidence 9988875432 22 334566 6788998877643
No 35
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=99.85 E-value=3.5e-21 Score=200.13 Aligned_cols=249 Identities=12% Similarity=0.080 Sum_probs=176.4
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhcc---CCcE
Q 014700 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL---GADY 202 (420)
Q Consensus 126 ~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~---~aDi 202 (420)
.+|||+|||+|.||.+||..|+++| ++|++|+|++++++.+.+.+... .++..+++++++++ ++|+
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~G--~~V~v~dr~~~~~~~l~~~g~~g---------~~i~~~~s~~e~v~~l~~aDv 71 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDHG--FVVCAFNRTVSKVDDFLANEAKG---------TKVVGAQSLKEMVSKLKKPRR 71 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHTT--CCEEEECSSTHHHHHHHHTTTTT---------SSCEECSSHHHHHHTBCSSCE
T ss_pred CCCEEEEEChhHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHhcccCC---------CceeccCCHHHHHhhccCCCE
Confidence 3689999999999999999999998 99999999999999988764211 13455678888765 5999
Q ss_pred EEEccCh-hhHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCeEEEECcccHHHH-hhcCCeEEE
Q 014700 203 CLHAMPV-QFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALEL-MNKLPTAMV 280 (420)
Q Consensus 203 VIlaVp~-~~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~~vl~GP~~a~ev-~~g~~t~i~ 280 (420)
||++||. ..++++++++.++++++++||+++++...++ ....+.+.+. |. .++..|....+. +...+ .++
T Consensus 72 Vil~Vp~~~~v~~vl~~l~~~L~~g~iIId~st~~~~~t-~~~~~~l~~~-Gi-----~fvd~pVsGg~~gA~~G~-~im 143 (484)
T 4gwg_A 72 IILLVKAGQAVDDFIEKLVPLLDTGDIIIDGGNSEYRDT-TRRCRDLKAK-GI-----LFVGSGVSGGEEGARYGP-SLM 143 (484)
T ss_dssp EEECSCSSHHHHHHHHHHGGGCCTTCEEEECSCCCHHHH-HHHHHHHHHT-TC-----EEEEEEEESHHHHHHHCC-EEE
T ss_pred EEEecCChHHHHHHHHHHHHhcCCCCEEEEcCCCCchHH-HHHHHHHHhh-cc-----ccccCCccCCHHHHhcCC-eee
Confidence 9999998 5899999999999999999999998665443 2333444432 32 233344333222 12223 444
Q ss_pred EecCCHHHHHHHHHHHhcCCceE-------EEcCChhHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHH
Q 014700 281 VASKDRKLANAVQQLLASKHLRI-------STSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWL 353 (420)
Q Consensus 281 ia~~d~e~~~~l~~ll~~~g~~v-------~~s~Di~g~e~~~alkNv~Ai~~G~~~gl~lg~N~~~al~~~~~~E~~~l 353 (420)
++ ++++.+++++++|+..+.++ .+..+ .|..+.+|+.+|.......++++|+..+
T Consensus 144 ~G-G~~ea~~~v~pll~~ig~~v~~~~~~~~~~G~-----------------~Gag~~vKmv~N~i~~~~m~~iaEa~~l 205 (484)
T 4gwg_A 144 PG-GNKEAWPHIKTIFQGIAAKVGTGEPCCDWVGD-----------------EGAGHFVKMVHNGIEYGDMQLICEAYHL 205 (484)
T ss_dssp EE-ECGGGHHHHHHHHHHHSCBCTTSCBSBCCCEE-----------------TTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cC-CCHHHHHHHHHHHHHhcCcccCCCceEEEECC-----------------ccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44 46788899999999876554 22222 2445566788899899999999999999
Q ss_pred HHH-cCCChhhhhhcc-----ccch---hhhhhcccCCCCccccccccCCCChHHHHHHcCCcccccchhhhh
Q 014700 354 ATK-MGAKPATITGLS-----GTGD---IMLTCFVNLSRNRTVGVRLGSGEKLDDILSSMNQVLVNPSMQPLL 417 (420)
Q Consensus 354 A~a-~Gi~~~t~~~l~-----g~gd---l~~t~~~~~sRn~~~G~~l~~g~~~~~~~~~~~~~~eG~~t~~~~ 417 (420)
+++ +|++++++.++. |.++ +..++.....+|+. | +..+++++++.+|.-||.-|+...
T Consensus 206 ~~~~~Gld~~~l~~v~~~w~~G~~~S~l~e~~~~~l~~~D~~-g-----~~~ld~i~d~~~~kgtG~wt~~~A 272 (484)
T 4gwg_A 206 MKDVLGMAQDEMAQAFEDWNKTELDSFLIEITANILKFQDTD-G-----KHLLPKIRDSAGQKGTGKWTAISA 272 (484)
T ss_dssp HHHTSCCCHHHHHHHHHHHTTTTTCBHHHHHHHHHHHCBCTT-S-----SBSGGGSCCCCCSSCTTHHHHHHH
T ss_pred HHHhcCCCHHHHHHHHHHHcCCCccchHHHHHHHHHhcCCcc-C-----CccHHHHhccccCcchHHHHHHHH
Confidence 999 999999887752 3322 22333333345543 3 345777878888888888776543
No 36
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=99.85 E-value=2e-20 Score=181.68 Aligned_cols=224 Identities=15% Similarity=0.172 Sum_probs=160.1
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEcc
Q 014700 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAM 207 (420)
Q Consensus 128 mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIlaV 207 (420)
|||+|||+|.||.++|..|+++| ++|++|+|++++++.+.+.| +..+++++++++++|+||+|+
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g--~~V~~~~~~~~~~~~~~~~g--------------~~~~~~~~~~~~~~Dvvi~~v 64 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHG--YPLIIYDVFPDACKEFQDAG--------------EQVVSSPADVAEKADRIITML 64 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTT--CCEEEECSSTHHHHHHHTTT--------------CEECSSHHHHHHHCSEEEECC
T ss_pred CeEEEEeccHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHcC--------------CeecCCHHHHHhcCCEEEEeC
Confidence 68999999999999999999998 89999999999888887643 345568888888999999999
Q ss_pred C-hhhHHHHHHHh---hhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCeEEEECcccHHHHhhcCCeEEEEec
Q 014700 208 P-VQFSSSFLEGI---SDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVAS 283 (420)
Q Consensus 208 p-~~~l~~vl~~i---~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~~vl~GP~~a~ev~~g~~t~i~ia~ 283 (420)
| +..+++++.++ .+.++++++||+ ++|+.+++.+.+.+.+.+. + ..+...|....+...+.....++.+
T Consensus 65 p~~~~~~~v~~~~~~~~~~l~~~~~vv~-~s~~~~~~~~~~~~~~~~~-g-----~~~~~~p~~~g~~~a~~~~~~~~~~ 137 (296)
T 2gf2_A 65 PTSINAIEAYSGANGILKKVKKGSLLID-SSTIDPAVSKELAKEVEKM-G-----AVFMDAPVSGGVGAARSGNLTFMVG 137 (296)
T ss_dssp SSHHHHHHHHHSTTSGGGTCCTTCEEEE-CSCCCHHHHHHHHHHHHHT-T-----CEEEECCEESHHHHHHHTCEEEEEE
T ss_pred CCHHHHHHHHhCchhHHhcCCCCCEEEE-CCCCCHHHHHHHHHHHHHc-C-----CEEEEcCCCCChhHHhcCcEEEEeC
Confidence 6 66788888774 446778999999 7788876555555555442 2 1233444443322222233334445
Q ss_pred CCHHHHHHHHHHHhcCCceEEEcCChhHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHcCCChhh
Q 014700 284 KDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGAKPAT 363 (420)
Q Consensus 284 ~d~e~~~~l~~ll~~~g~~v~~s~Di~g~e~~~alkNv~Ai~~G~~~gl~lg~N~~~al~~~~~~E~~~lA~a~Gi~~~t 363 (420)
.+++..++++++|+..|+.++...+. + ....+|+.+|....++..++.|+..+++++|+++++
T Consensus 138 ~~~~~~~~v~~l~~~~g~~~~~~~~~-g----------------~~~~~kl~~n~~~~~~~~~~~Ea~~~~~~~G~~~~~ 200 (296)
T 2gf2_A 138 GVEDEFAAAQELLGCMGSNVVYCGAV-G----------------TGQAAKICNNMLLAISMIGTAEAMNLGIRLGLDPKL 200 (296)
T ss_dssp SCGGGHHHHHHHHTTTEEEEEEEEST-T----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHH
T ss_pred CCHHHHHHHHHHHHHHcCCeEEeCCc-c----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 67788899999999999887765442 1 122344567777788889999999999999999998
Q ss_pred hhhccccch---hhhhhc---------ccCCCCccccccc
Q 014700 364 ITGLSGTGD---IMLTCF---------VNLSRNRTVGVRL 391 (420)
Q Consensus 364 ~~~l~g~gd---l~~t~~---------~~~sRn~~~G~~l 391 (420)
+.++...++ .+.++. +..+||+..|+.+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~~~g~~~ 240 (296)
T 2gf2_A 201 LAKILNMSSGRCWSSDTYNPVPGVMDGVPSANNYQGGFGT 240 (296)
T ss_dssp HHHHHHTSTTCBHHHHHSCSSTTTCSSSGGGGTTCSSSBH
T ss_pred HHHHHHhCcccCHHHHhcCCcccccccchhccCCCCCCch
Confidence 887654332 222221 3346777777654
No 37
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=99.85 E-value=5.9e-21 Score=188.11 Aligned_cols=244 Identities=12% Similarity=0.046 Sum_probs=158.1
Q ss_pred ccchhhhchhcceeccccccccccchhhcCCCeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCC--HHHHHHHHHhcC
Q 014700 97 RRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRD--PAVCQSINEKHC 173 (420)
Q Consensus 97 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~aG~~~-~V~l~~r~--~~~~~~i~~~g~ 173 (420)
.|..+.+.|.+ |.+.... + ...+|||+|||+|.||.+||..|+++| + +|++|+|+ ++..+.+.+.|
T Consensus 2 ~~~~~~~~~~~---~~~~~~~-~----~~~~~~I~iIG~G~mG~~~A~~L~~~G--~~~V~~~dr~~~~~~~~~~~~~g- 70 (312)
T 3qsg_A 2 HHHHHHSSGVD---LGTENLY-F----QSNAMKLGFIGFGEAASAIASGLRQAG--AIDMAAYDAASAESWRPRAEELG- 70 (312)
T ss_dssp -------------------------------CEEEEECCSHHHHHHHHHHHHHS--CCEEEEECSSCHHHHHHHHHHTT-
T ss_pred Ccccccccccc---cCccccc-c----cCCCCEEEEECccHHHHHHHHHHHHCC--CCeEEEEcCCCCHHHHHHHHHCC-
Confidence 35666777766 4421111 0 124689999999999999999999998 8 99999997 56777776643
Q ss_pred CCCCCCCCCCCCceEEeCCHHHhccCCcEEEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHh-
Q 014700 174 NCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQAL- 252 (420)
Q Consensus 174 ~~~~l~~~~l~~~i~a~td~~eal~~aDiVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~l- 252 (420)
+..+++++++++++|+||+|||.....++++++.+.++++++||++++ +.+.+...+.+.+.+..
T Consensus 71 -------------~~~~~~~~e~~~~aDvVi~~vp~~~~~~~~~~l~~~l~~~~ivvd~st-~~~~~~~~~~~~~~~~~~ 136 (312)
T 3qsg_A 71 -------------VSCKASVAEVAGECDVIFSLVTAQAALEVAQQAGPHLCEGALYADFTS-CSPAVKRAIGDVISRHRP 136 (312)
T ss_dssp -------------CEECSCHHHHHHHCSEEEECSCTTTHHHHHHHHGGGCCTTCEEEECCC-CCHHHHHHHHHHHHHHCT
T ss_pred -------------CEEeCCHHHHHhcCCEEEEecCchhHHHHHHhhHhhcCCCCEEEEcCC-CCHHHHHHHHHHHHhhcC
Confidence 355678889889999999999999888889999999999999998874 66665555556665542
Q ss_pred CCCCCCeEEEECcccHHHHhhcCCeEEEEecCCHHHHHHHHHHHhcCCceEEEcCC-hhHHHHHHHHHHHHHHHHHHHHh
Q 014700 253 RNPRQPFIALSGPSFALELMNKLPTAMVVASKDRKLANAVQQLLASKHLRISTSSD-VTGVEIAGALKNVLAIAAGIVVG 331 (420)
Q Consensus 253 g~~~~~~~vl~GP~~a~ev~~g~~t~i~ia~~d~e~~~~l~~ll~~~g~~v~~s~D-i~g~e~~~alkNv~Ai~~G~~~g 331 (420)
|....+ +.+.||..+. .+.. .+++++.+. ++++++|+..|.++++.++ +-..++.
T Consensus 137 g~~~vd-~pv~g~~~~~---~g~l-~i~vgg~~~---~~~~~ll~~~g~~~~~~g~~~g~a~~~---------------- 192 (312)
T 3qsg_A 137 SAQYAA-VAVMSAVKPH---GHRV-PLVVDGDGA---RRFQAAFTLYGCRIEVLDGEVGGAALL---------------- 192 (312)
T ss_dssp TCEEEE-EEECSCSTTT---GGGS-EEEEESTTH---HHHHHHHHTTTCEEEECCSSTTHHHHH----------------
T ss_pred CCeEEe-ccccCCchhh---cCCE-EEEecCChH---HHHHHHHHHhCCCeEEcCCCCCHHHHH----------------
Confidence 321111 2234443322 2333 344455443 8899999999999888776 5433443
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHcCCChhhhhh-cc-ccc--hhhhhhcccCCCCccccccc
Q 014700 332 MNLGNNSMAALVAQGCSEIRWLATKMGAKPATITG-LS-GTG--DIMLTCFVNLSRNRTVGVRL 391 (420)
Q Consensus 332 l~lg~N~~~al~~~~~~E~~~lA~a~Gi~~~t~~~-l~-g~g--dl~~t~~~~~sRn~~~G~~l 391 (420)
|+.+|........++.|+..+++++|++++ +++ +. +.+ .+...+...++|++..|+.+
T Consensus 193 -Kl~~n~~~~~~~~~~~Ea~~la~~~Gld~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~ 254 (312)
T 3qsg_A 193 -KMCRSAVLKGLEALFLEALAAAEKMGLADR-VLASLDASFPEHHLRDLALYLVERNLEHADRR 254 (312)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHTTTCHHH-HHHHHHHHSGGGTHHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHcCCCHH-HHHHHHhcCCchhHHHhhhHhhcCCCCcccch
Confidence 345566666777889999999999999995 554 22 112 12222334567888888876
No 38
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=99.85 E-value=7.6e-21 Score=197.70 Aligned_cols=227 Identities=12% Similarity=0.090 Sum_probs=165.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccC---CcEE
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLG---ADYC 203 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~---aDiV 203 (420)
+|||+|||+|.||.++|..|+++| ++|.+|+|++++++.+.+... + .++..++++++++.. +|+|
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G--~~V~v~dr~~~~~~~l~~~~~------~----~gi~~~~s~~e~v~~l~~aDvV 72 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRG--YTVAIYNRTTSKTEEVFKEHQ------D----KNLVFTKTLEEFVGSLEKPRRI 72 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTT--CCEEEECSSHHHHHHHHHHTT------T----SCEEECSSHHHHHHTBCSSCEE
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCC--CEEEEEcCCHHHHHHHHHhCc------C----CCeEEeCCHHHHHhhccCCCEE
Confidence 479999999999999999999998 899999999999988877521 0 245677788887765 9999
Q ss_pred EEccCh-hhHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCeEEEECcccHHHH-hhcCCeEEEE
Q 014700 204 LHAMPV-QFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALEL-MNKLPTAMVV 281 (420)
Q Consensus 204 IlaVp~-~~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~~vl~GP~~a~ev-~~g~~t~i~i 281 (420)
|+|||+ ..++++++++.+.++++++||++++|...++ +.+.+.+.. ..+.++..|....+. ....+. ++.
T Consensus 73 ilavp~~~~v~~vl~~l~~~l~~g~iiId~s~~~~~~~-----~~l~~~l~~--~g~~~v~~pv~gg~~~a~~g~~-i~~ 144 (474)
T 2iz1_A 73 MLMVQAGAATDATIKSLLPLLDIGDILIDGGNTHFPDT-----MRRNAELAD--SGINFIGTGVSGGEKGALLGPS-MMP 144 (474)
T ss_dssp EECCCTTHHHHHHHHHHGGGCCTTCEEEECSCCCHHHH-----HHHHHHTTT--SSCEEEEEEECSHHHHHHHCCC-EEE
T ss_pred EEEccCchHHHHHHHHHHhhCCCCCEEEECCCCCHHHH-----HHHHHHHHH--CCCeEECCCCCCChhhhccCCe-EEe
Confidence 999998 5799999999999999999999999875432 222233332 123344555543322 222233 334
Q ss_pred ecCCHHHHHHHHHHHhcCCce--------EEEcCChhHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHH
Q 014700 282 ASKDRKLANAVQQLLASKHLR--------ISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWL 353 (420)
Q Consensus 282 a~~d~e~~~~l~~ll~~~g~~--------v~~s~Di~g~e~~~alkNv~Ai~~G~~~gl~lg~N~~~al~~~~~~E~~~l 353 (420)
+.+++..++++++|+..+.. +.+..+. |....+|+.+|....++.+++.|+..+
T Consensus 145 -gg~~~~~~~v~~ll~~~g~~~~~dge~~~~~~g~~-----------------g~g~~~Kl~~N~~~~~~~~~laEa~~l 206 (474)
T 2iz1_A 145 -GGQKEAYDLVAPIFEQIAAKAPQDGKPCVAYMGAN-----------------GAGHYVKMVHNGIEYGDMQLIAESYDL 206 (474)
T ss_dssp -EECHHHHHHHHHHHHHHSCBCTTTCCBSBCCCBST-----------------THHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -cCCHHHHHHHHHHHHHHhcccccCCCceEEEECCc-----------------cHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 44788899999999987765 2333332 223334566777778889999999999
Q ss_pred HHH-cCCChhhhhhcc-----c-cchhhhhhccc--CCCCcccc-ccc
Q 014700 354 ATK-MGAKPATITGLS-----G-TGDIMLTCFVN--LSRNRTVG-VRL 391 (420)
Q Consensus 354 A~a-~Gi~~~t~~~l~-----g-~gdl~~t~~~~--~sRn~~~G-~~l 391 (420)
+++ +|++++++.++. | .++.+.+|++. .+||+..| +.+
T Consensus 207 ~~~~~Gl~~~~~~~l~~~w~~g~~~s~l~~~~~~~l~~~d~~~g~~~v 254 (474)
T 2iz1_A 207 LKRILGLSNAEIQAIFEEWNEGELDSYLIEITKEVLKRKDDEGEGYIV 254 (474)
T ss_dssp HHHTSCCCHHHHHHHHHHHTTTTTCBHHHHHHHHHTTCBCSSSSSBGG
T ss_pred HHHhcCCCHHHHHHHHHHhcCCCccccHHHhhhhHhhcCCCCCChhHH
Confidence 999 899999988754 4 56677777665 57898888 444
No 39
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=99.85 E-value=2.6e-20 Score=183.04 Aligned_cols=224 Identities=16% Similarity=0.166 Sum_probs=159.7
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEE
Q 014700 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (420)
Q Consensus 126 ~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIl 205 (420)
.+|||+|||+|.||.++|..|+++| ++|++|+|+++.++.+.+.| +...++++++++++|+||+
T Consensus 29 ~~~~I~iIG~G~mG~~~a~~l~~~g--~~V~~~~~~~~~~~~~~~~g--------------~~~~~~~~~~~~~~DvVi~ 92 (316)
T 2uyy_A 29 TDKKIGFLGLGLMGSGIVSNLLKMG--HTVTVWNRTAEKCDLFIQEG--------------ARLGRTPAEVVSTCDITFA 92 (316)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHTT--CCEEEECSSGGGGHHHHHTT--------------CEECSCHHHHHHHCSEEEE
T ss_pred CCCeEEEEcccHHHHHHHHHHHhCC--CEEEEEeCCHHHHHHHHHcC--------------CEEcCCHHHHHhcCCEEEE
Confidence 3589999999999999999999998 89999999998888877643 2445678888889999999
Q ss_pred ccC-hhhHHHHHHHhh---hcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCeEEEECcccHHH--HhhcCCeEE
Q 014700 206 AMP-VQFSSSFLEGIS---DYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALE--LMNKLPTAM 279 (420)
Q Consensus 206 aVp-~~~l~~vl~~i~---~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~~vl~GP~~a~e--v~~g~~t~i 279 (420)
||| +..+++++.++. +.+.++++||+++++ .+.+.+.+.+.+.+. ...++.+|.+... ...+. ..+
T Consensus 93 av~~~~~~~~v~~~~~~~~~~l~~~~~vv~~s~~-~~~~~~~l~~~~~~~------~~~~v~~p~~g~~~~~~~g~-~~~ 164 (316)
T 2uyy_A 93 CVSDPKAAKDLVLGPSGVLQGIRPGKCYVDMSTV-DADTVTELAQVIVSR------GGRFLEAPVSGNQQLSNDGM-LVI 164 (316)
T ss_dssp CCSSHHHHHHHHHSTTCGGGGCCTTCEEEECSCC-CHHHHHHHHHHHHHT------TCEEEECCEESCHHHHHHTC-EEE
T ss_pred eCCCHHHHHHHHcCchhHhhcCCCCCEEEECCCC-CHHHHHHHHHHHHHc------CCEEEEcCccCChhHHhhCC-EEE
Confidence 999 788999887653 678889999999874 333333344444321 2245555554322 22232 223
Q ss_pred EEecCCHHHHHHHHHHHhcCCceEEEcCChhHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHcCC
Q 014700 280 VVASKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGA 359 (420)
Q Consensus 280 ~ia~~d~e~~~~l~~ll~~~g~~v~~s~Di~g~e~~~alkNv~Ai~~G~~~gl~lg~N~~~al~~~~~~E~~~lA~a~Gi 359 (420)
++++ +++..++++++|+..|+.+++.+++....|.|.+.|. ....+..++.|+..+++++|+
T Consensus 165 ~~~g-~~~~~~~v~~ll~~~g~~~~~~~~~~~~~~~K~~~n~-----------------~~~~~~~~~~Ea~~la~~~G~ 226 (316)
T 2uyy_A 165 LAAG-DRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNM-----------------VQGSFMATIAEGLTLAQVTGQ 226 (316)
T ss_dssp EEEE-CHHHHHHTHHHHHHHEEEEEECSSTTHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHTTC
T ss_pred EeCC-CHHHHHHHHHHHHHhcCCEEEeCCCCHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHcCC
Confidence 3344 7788899999999999998888786555565544433 222367799999999999999
Q ss_pred Chhhhhhccccch-----hhhhhcccCCCCccccccc
Q 014700 360 KPATITGLSGTGD-----IMLTCFVNLSRNRTVGVRL 391 (420)
Q Consensus 360 ~~~t~~~l~g~gd-----l~~t~~~~~sRn~~~G~~l 391 (420)
+++++.++...++ +...+.+.+.||++.|+.+
T Consensus 227 ~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~g~~~ 263 (316)
T 2uyy_A 227 SQQTLLDILNQGQLASIFLDQKCQNILQGNFKPDFYL 263 (316)
T ss_dssp CHHHHHHHHHHSTTCCHHHHHHHHHHHHTCCCCSSBH
T ss_pred CHHHHHHHHHcCCCCCHHHHHhhHHhhcCCCCCCCcH
Confidence 9999887653332 3333555667787776543
No 40
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=99.85 E-value=4.1e-21 Score=188.83 Aligned_cols=213 Identities=11% Similarity=0.014 Sum_probs=157.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEc
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIla 206 (420)
+|||+|||+|+||+++|..|+ +| ++|++|+|++++.+.+++.|.+.. .++...+..+... +++..++|+||+|
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~g--~~V~~~~r~~~~~~~l~~~G~~~~-~~~~~~~~~~~~~---~~~~~~~D~vila 74 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-LY--HDVTVVTRRQEQAAAIQSEGIRLY-KGGEEFRADCSAD---TSINSDFDLLVVT 74 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TT--SEEEEECSCHHHHHHHHHHCEEEE-ETTEEEEECCEEE---SSCCSCCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHh-cC--CceEEEECCHHHHHHHHhCCceEe-cCCCeeccccccc---ccccCCCCEEEEE
Confidence 489999999999999999999 88 999999999988899988775433 1221122222221 2346789999999
Q ss_pred cChhhHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCC------CCeEEEECcccHHHHhhcCCeEEE
Q 014700 207 MPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPR------QPFIALSGPSFALELMNKLPTAMV 280 (420)
Q Consensus 207 Vp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~------~~~~vl~GP~~a~ev~~g~~t~i~ 280 (420)
||+++++++++.+.+. .+++ ||+++||++.+ +.+.+.++... ...+...+|+...+...+ .+.
T Consensus 75 vK~~~~~~~l~~l~~~-~~~~-ivs~~nGi~~~------e~l~~~~~~~~vl~g~~~~~a~~~~pg~v~~~~~g---~~~ 143 (307)
T 3ego_A 75 VKQHQLQSVFSSLERI-GKTN-ILFLQNGMGHI------HDLKDWHVGHSIYVGIVEHGAVRKSDTAVDHTGLG---AIK 143 (307)
T ss_dssp CCGGGHHHHHHHTTSS-CCCE-EEECCSSSHHH------HHHHTCCCSCEEEEEEECCEEEECSSSEEEEEECC---CEE
T ss_pred eCHHHHHHHHHHhhcC-CCCe-EEEecCCccHH------HHHHHhCCCCcEEEEEEeeceEECCCCEEEEeeee---eEE
Confidence 9999999999999875 5666 99999999853 34555555421 112345567665443322 234
Q ss_pred EecCC--HHHHHHHHHHHhcCCceEEEcCChhHHHHHHHHHHHHHHHHHHHHhcccch----hHHHHHHHHHHHHHHHHH
Q 014700 281 VASKD--RKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGN----NSMAALVAQGCSEIRWLA 354 (420)
Q Consensus 281 ia~~d--~e~~~~l~~ll~~~g~~v~~s~Di~g~e~~~alkNv~Ai~~G~~~gl~lg~----N~~~al~~~~~~E~~~lA 354 (420)
++..+ .+.++++.++|+..++++..++|+....|.|++.|+..+..+...+..++. .....++...+.|+.+++
T Consensus 144 iG~~~~~~~~~~~l~~~l~~ag~~~~~~~di~~~~W~Kl~~N~~~N~ltal~~~~~g~l~~~~~~~~l~~~l~~E~~~va 223 (307)
T 3ego_A 144 WSAFDDAEPDRLNILFQHNHSDFPIYYETDWYRLLTGKLIVNACINPLTALLQVKNGELLTTPAYLAFMKLVFQEACRIL 223 (307)
T ss_dssp EEECTTCCGGGGTTTTSSCCTTSCEEECSCHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHSHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCcHHHHHHHHHhhhCCCCcEechhHHHHHHHHHHHhhhhhHHHHHhcCCcchhhcChhHHHHHHHHHHHHHHHH
Confidence 44322 455677888888999999999999999999999999777777777776664 334678999999999999
Q ss_pred HHc
Q 014700 355 TKM 357 (420)
Q Consensus 355 ~a~ 357 (420)
++.
T Consensus 224 ~~~ 226 (307)
T 3ego_A 224 KLE 226 (307)
T ss_dssp TCS
T ss_pred hcc
Confidence 865
No 41
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=99.85 E-value=3.9e-20 Score=178.77 Aligned_cols=219 Identities=15% Similarity=0.127 Sum_probs=156.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEc
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIla 206 (420)
||||+|||+|.||.++|..|++ | ++|++|+|++++.+.+.+.|. ...+ +++++.++|+||+|
T Consensus 1 M~~i~iiG~G~~G~~~a~~l~~-g--~~V~~~~~~~~~~~~~~~~g~--------------~~~~-~~~~~~~~D~vi~~ 62 (289)
T 2cvz_A 1 MEKVAFIGLGAMGYPMAGHLAR-R--FPTLVWNRTFEKALRHQEEFG--------------SEAV-PLERVAEARVIFTC 62 (289)
T ss_dssp -CCEEEECCSTTHHHHHHHHHT-T--SCEEEECSSTHHHHHHHHHHC--------------CEEC-CGGGGGGCSEEEEC
T ss_pred CCeEEEEcccHHHHHHHHHHhC-C--CeEEEEeCCHHHHHHHHHCCC--------------cccC-HHHHHhCCCEEEEe
Confidence 4799999999999999999999 8 899999999998888877542 1223 56677899999999
Q ss_pred cChhh-HHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCeEEEECcccHHH--HhhcCCeEEEEec
Q 014700 207 MPVQF-SSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALE--LMNKLPTAMVVAS 283 (420)
Q Consensus 207 Vp~~~-l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~~vl~GP~~a~e--v~~g~~t~i~ia~ 283 (420)
+|... ++++++++.+.++++++||+++++. +.+.+.+.+.+.+. ...++..|..... ...+.. .++.+
T Consensus 63 v~~~~~~~~v~~~l~~~l~~~~~vv~~s~~~-~~~~~~l~~~~~~~------g~~~~~~p~~~~~~~~~~g~~--~~~~~ 133 (289)
T 2cvz_A 63 LPTTREVYEVAEALYPYLREGTYWVDATSGE-PEASRRLAERLREK------GVTYLDAPVSGGTSGAEAGTL--TVMLG 133 (289)
T ss_dssp CSSHHHHHHHHHHHTTTCCTTEEEEECSCCC-HHHHHHHHHHHHTT------TEEEEECCEESHHHHHHHTCE--EEEEE
T ss_pred CCChHHHHHHHHHHHhhCCCCCEEEECCCCC-HHHHHHHHHHHHHc------CCEEEEecCCCChhHHhhCCe--EEEEC
Confidence 99764 8889999988888899999888643 32223333333321 2334455644322 223332 23345
Q ss_pred CCHHHHHHHHHHHhcCCceEEEcCChhHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHcCCChhh
Q 014700 284 KDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGAKPAT 363 (420)
Q Consensus 284 ~d~e~~~~l~~ll~~~g~~v~~s~Di~g~e~~~alkNv~Ai~~G~~~gl~lg~N~~~al~~~~~~E~~~lA~a~Gi~~~t 363 (420)
.+++..++++++| ..|++++..+|.....|.|. ..|....++..++.|+..++++.|+++++
T Consensus 134 ~~~~~~~~~~~ll-~~g~~~~~~~~~~~~~~~k~-----------------~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~ 195 (289)
T 2cvz_A 134 GPEEAVERVRPFL-AYAKKVVHVGPVGAGHAVKA-----------------INNALLAVNLWAAGEGLLALVKQGVSAEK 195 (289)
T ss_dssp SCHHHHHHHGGGC-TTEEEEEEEESTTHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHHTTCCHHH
T ss_pred CCHHHHHHHHHHH-hhcCCeEEcCCCcHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHHcCcCHHH
Confidence 6788899999999 99998877777654445443 34556678889999999999999999999
Q ss_pred hhhccccch---hhh--hhc-ccCCCCcccccc
Q 014700 364 ITGLSGTGD---IML--TCF-VNLSRNRTVGVR 390 (420)
Q Consensus 364 ~~~l~g~gd---l~~--t~~-~~~sRn~~~G~~ 390 (420)
+.++...++ .+. ++. +.+.||++.|+.
T Consensus 196 ~~~~~~~~~~~s~~~~~~~~~~~l~~~~~~g~~ 228 (289)
T 2cvz_A 196 ALEVINASSGRSNATENLIPQRVLTRAFPKTFA 228 (289)
T ss_dssp HHHHHTTSTTCBHHHHHTHHHHTTTSCCCCSSB
T ss_pred HHHHHHccCCCCHHHHHhccchhhcCCCCCCcC
Confidence 988664433 122 234 467888877754
No 42
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=99.84 E-value=2.5e-20 Score=194.09 Aligned_cols=227 Identities=18% Similarity=0.218 Sum_probs=170.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCC------CCCceEEeCCHHHhccCC
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQK------LPENVIATTDAKTALLGA 200 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~------l~~~i~a~td~~eal~~a 200 (420)
+|||+|||+|.||.++|..|+++|.+++|++|||++++++.+++.+ ...+.++.. ...++.+++++++++++|
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~-~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~~a 87 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDK-LPIYEPGLDEIVFAARGRNLFFSSDIPKAIAEA 87 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSS-CSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCC-CCcCCCCHHHHHHHhhcCCEEEECCHHHHhhcC
Confidence 5799999999999999999999832389999999999999988643 333333321 023578888988888999
Q ss_pred cEEEEccChh---------------hHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCC-CCCCeEEEEC
Q 014700 201 DYCLHAMPVQ---------------FSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRN-PRQPFIALSG 264 (420)
Q Consensus 201 DiVIlaVp~~---------------~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~-~~~~~~vl~G 264 (420)
|+||+|||+. ++++++++|.++++++++||..+ ++.+.+.+.+.+.+.+..+. ....+.+.++
T Consensus 88 Dvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~S-Tv~~gt~~~l~~~l~~~~~~~~~~d~~v~~~ 166 (481)
T 2o3j_A 88 DLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKS-TVPVKAAESIGCILREAQKNNENLKFQVLSN 166 (481)
T ss_dssp SEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECS-CCCTTHHHHHHHHHHHHTC----CCEEEEEC
T ss_pred CEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECC-CCCCCHHHHHHHHHHHhhCcCcCCceEEEeC
Confidence 9999999863 38899999999999999998776 57777666677777662231 1134667889
Q ss_pred cccHHHHh----hcCCeEEEEecCCH----HHHHHHHHHHhcCCc-eEEEcCChhHHHHHHHHHHHHHHHHHHHHhcccc
Q 014700 265 PSFALELM----NKLPTAMVVASKDR----KLANAVQQLLASKHL-RISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLG 335 (420)
Q Consensus 265 P~~a~ev~----~g~~t~i~ia~~d~----e~~~~l~~ll~~~g~-~v~~s~Di~g~e~~~alkNv~Ai~~G~~~gl~lg 335 (420)
|.+..+.. ...+..+++++.+. +..++++++|+..+. .++...|+...+|.|++.|
T Consensus 167 Pe~~~~G~a~~~~~~~~~iviG~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~d~~~ae~~Kl~~N--------------- 231 (481)
T 2o3j_A 167 PEFLAEGTAMKDLANPDRVLIGGESSPEGLQAVAELVRIYENWVPRNRIITTNTWSSELSKLVAN--------------- 231 (481)
T ss_dssp CCCCCTTCHHHHHHSCSCEEEEECSSHHHHHHHHHHHHHHHTTSCGGGEEEEEHHHHHHHHHHHH---------------
T ss_pred cccccccchhhcccCCCEEEEEecCchhhHHHHHHHHHHHHhhcCCCeEEecCHHHHHHHHHHHH---------------
Confidence 98765421 12343466666542 567899999999874 6677788988888876544
Q ss_pred hhHHHHHHHHHHHHHHHHHHHcCCChhhhhhccccch
Q 014700 336 NNSMAALVAQGCSEIRWLATKMGAKPATITGLSGTGD 372 (420)
Q Consensus 336 ~N~~~al~~~~~~E~~~lA~a~Gi~~~t~~~l~g~gd 372 (420)
...++....++|+..+|+++|++++++.+..+.+.
T Consensus 232 --~~~a~~ia~~nE~~~la~~~Gid~~~v~~~~~~~~ 266 (481)
T 2o3j_A 232 --AFLAQRISSINSISAVCEATGAEISEVAHAVGYDT 266 (481)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHTST
T ss_pred --HHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHccCC
Confidence 45677788999999999999999999998766543
No 43
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=99.84 E-value=3.2e-20 Score=178.92 Aligned_cols=219 Identities=16% Similarity=0.193 Sum_probs=160.5
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEcc
Q 014700 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAM 207 (420)
Q Consensus 128 mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIlaV 207 (420)
|||+|||+|.||.++|..|.++| ++|++|+|+++.++.+.+.|.. ...+++++++ +++|+||+||
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g--~~V~~~~~~~~~~~~~~~~g~~------------~~~~~~~~~~-~~~D~vi~av 65 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRG--HYLIGVSRQQSTCEKAVERQLV------------DEAGQDLSLL-QTAKIIFLCT 65 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHHTTSC------------SEEESCGGGG-TTCSEEEECS
T ss_pred CEEEEEcCcHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHhCCCC------------ccccCCHHHh-CCCCEEEEEC
Confidence 69999999999999999999998 8999999999988888765421 1345678887 8999999999
Q ss_pred ChhhHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCeE--EEECcccHH-HHhhcCCeEEEEe-c
Q 014700 208 PVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFI--ALSGPSFAL-ELMNKLPTAMVVA-S 283 (420)
Q Consensus 208 p~~~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~~--vl~GP~~a~-ev~~g~~t~i~ia-~ 283 (420)
|++.+.++++++.++++++++|++++ ++.....+.+.+.+.+.++. +++. ...||.++. ++..+.++.++.. +
T Consensus 66 ~~~~~~~~~~~l~~~~~~~~~vv~~~-~~~~~~~~~~~~~~~~~~~~--~p~~g~~~~gp~~a~~~~~~g~~~~~~~~~~ 142 (279)
T 2f1k_A 66 PIQLILPTLEKLIPHLSPTAIVTDVA-SVKTAIAEPASQLWSGFIGG--HPMAGTAAQGIDGAEENLFVNAPYVLTPTEY 142 (279)
T ss_dssp CHHHHHHHHHHHGGGSCTTCEEEECC-SCCHHHHHHHHHHSTTCEEE--EECCCCSCSSGGGCCTTTTTTCEEEEEECTT
T ss_pred CHHHHHHHHHHHHhhCCCCCEEEECC-CCcHHHHHHHHHHhCCEeec--CcccCCccCCHHHHhHHHhCCCcEEEecCCC
Confidence 99999999999999998899999874 34332222222222211111 1111 233566554 3444545544443 3
Q ss_pred CCHHHHHHHHHHHhcCCceEEEcCChhHHHHHHHHHHH-HHHHHHHHHhccc-c----hhHHHHHHHHHHHHHHHHHHHc
Q 014700 284 KDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNV-LAIAAGIVVGMNL-G----NNSMAALVAQGCSEIRWLATKM 357 (420)
Q Consensus 284 ~d~e~~~~l~~ll~~~g~~v~~s~Di~g~e~~~alkNv-~Ai~~G~~~gl~l-g----~N~~~al~~~~~~E~~~lA~a~ 357 (420)
.+++..+.++++|+..|++++..+|..+.+|.++++|. ..++.++.+++.. + .+....++.+++.|+.+++
T Consensus 143 ~~~~~~~~v~~l~~~~g~~~~~~~~~~~~~~~~~~~~~p~~i~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~r~~--- 219 (279)
T 2f1k_A 143 TDPEQLACLRSVLEPLGVKIYLCTPADHDQAVAWISHLPVMVSAALIQACAGEKDGDILKLAQNLASSGFRDTSRVG--- 219 (279)
T ss_dssp CCHHHHHHHHHHHGGGTCEEEECCHHHHHHHHHHHTHHHHHHHHHHHHHHHTCSCHHHHHHHHHHCCHHHHHHHTGG---
T ss_pred CCHHHHHHHHHHHHHcCCEEEEcCHHHHHHHHHHHhhHHHHHHHHHHHHHHhcccccchhHHHhhcCCcccchhccc---
Confidence 47888999999999999999999999999999999995 5666677666543 2 2567788899999998887
Q ss_pred CCChhhhhhc
Q 014700 358 GAKPATITGL 367 (420)
Q Consensus 358 Gi~~~t~~~l 367 (420)
+.+|+.+.+.
T Consensus 220 ~~~p~~~~~~ 229 (279)
T 2f1k_A 220 GGNPELGTMM 229 (279)
T ss_dssp GSCHHHHHHH
T ss_pred CCCHHHHHHH
Confidence 4677776653
No 44
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=99.84 E-value=7.3e-20 Score=187.67 Aligned_cols=221 Identities=12% Similarity=0.113 Sum_probs=168.8
Q ss_pred cCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCC-------CCCceEEeCCHHHhc
Q 014700 125 ERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQK-------LPENVIATTDAKTAL 197 (420)
Q Consensus 125 ~~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~-------l~~~i~a~td~~eal 197 (420)
.+..|..|||+|.||.++|..|+++| |+|++||+++++++.+++. ..+.|.++.. .+.++.+++|+
T Consensus 9 ~~~~~~~ViGlGyvGlp~A~~La~~G--~~V~~~D~~~~kv~~L~~g-~~pi~epgl~~ll~~~~~~g~l~~ttd~---- 81 (431)
T 3ojo_A 9 HHGSKLTVVGLGYIGLPTSIMFAKHG--VDVLGVDINQQTIDKLQNG-QISIEEPGLQEVYEEVLSSGKLKVSTTP---- 81 (431)
T ss_dssp ---CEEEEECCSTTHHHHHHHHHHTT--CEEEEECSCHHHHHHHHTT-CCSSCCTTHHHHHHHHHHTTCEEEESSC----
T ss_pred ccCCccEEEeeCHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHCC-CCCcCCCCHHHHHHhhcccCceEEeCch----
Confidence 34579999999999999999999999 9999999999999999974 4555666643 14568888773
Q ss_pred cCCcEEEEccChhh------------HHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCC-CCCeEEEEC
Q 014700 198 LGADYCLHAMPVQF------------SSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNP-RQPFIALSG 264 (420)
Q Consensus 198 ~~aDiVIlaVp~~~------------l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~-~~~~~vl~G 264 (420)
++||+||+|||+.. ++.+.+++.++++++++||..+ ++.+.+.+.+.+.+.+..|.. ..++.++++
T Consensus 82 ~~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~S-TV~pgtt~~v~~~i~e~~g~~~~~d~~v~~~ 160 (431)
T 3ojo_A 82 EASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVES-TIAPKTMDDFVKPVIENLGFTIGEDIYLVHC 160 (431)
T ss_dssp CCCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECS-CCCTTHHHHTHHHHHHTTTCCBTTTEEEEEC
T ss_pred hhCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEec-CCChhHHHHHHHHHHHHcCCCcCCCeEEEEC
Confidence 47999999999753 7888899999999999888776 788888777776665544431 245789999
Q ss_pred cccHHHHh----hcCCeEEEEecCCHHHHHHHHHHHhcCCceEEEcCChhHHHHHHHHHHHHHHHHHHHHhcccchhHHH
Q 014700 265 PSFALELM----NKLPTAMVVASKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMA 340 (420)
Q Consensus 265 P~~a~ev~----~g~~t~i~ia~~d~e~~~~l~~ll~~~g~~v~~s~Di~g~e~~~alkNv~Ai~~G~~~gl~lg~N~~~ 340 (420)
|.+..+.. ...+..+ +++.+++.+++++++|+..+-...+..++...|.. |+.+|...
T Consensus 161 Pe~~~~G~A~~~~~~p~~I-v~G~~~~~~~~~~~ly~~~~~~~~~~~~~~~AE~~-----------------Kl~~N~~~ 222 (431)
T 3ojo_A 161 PERVLPGKILEELVHNNRI-IGGVTKACIEAGKRVYRTFVQGEMIETDARTAEMS-----------------KLMENTYR 222 (431)
T ss_dssp CCCCCTTSHHHHHHHSCEE-EEESSHHHHHHHHHHHTTTCCSCEEEEEHHHHHHH-----------------HHHHHHHH
T ss_pred CCcCCCcchhhcccCCCEE-EEeCCHHHHHHHHHHHHHHhCCcEEeCCHHHHHHH-----------------HHHHHHHH
Confidence 97764321 1234455 45557899999999999876554555666554444 45677788
Q ss_pred HHHHHHHHHHHHHHHHcCCChhhhhhccccc
Q 014700 341 ALVAQGCSEIRWLATKMGAKPATITGLSGTG 371 (420)
Q Consensus 341 al~~~~~~E~~~lA~a~Gi~~~t~~~l~g~g 371 (420)
++....++|+..+|+++|+|++.+++..+..
T Consensus 223 a~~Ia~~nE~~~l~e~~GiD~~~v~~~~~~~ 253 (431)
T 3ojo_A 223 DVNIALANELTKICNNLNINVLDVIEMANKH 253 (431)
T ss_dssp HHHHHHHHHHHHHHHHTTCCHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHccC
Confidence 8889999999999999999999998866543
No 45
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=99.83 E-value=4.4e-20 Score=191.62 Aligned_cols=228 Identities=15% Similarity=0.177 Sum_probs=168.1
Q ss_pred hcCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCC--C----CCceEEeCCHHHhc
Q 014700 124 LERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQK--L----PENVIATTDAKTAL 197 (420)
Q Consensus 124 ~~~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~--l----~~~i~a~td~~eal 197 (420)
|+.+|||+|||+|.||.++|..|+++|.+++|++|||++++++.+++.+ ...+.++.. + ..++.+++++++++
T Consensus 2 M~~~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~-~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~ 80 (467)
T 2q3e_A 2 MFEIKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPT-LPIYEPGLKEVVESCRGKNLFFSTNIDDAI 80 (467)
T ss_dssp CCCCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSS-CSSCCTTHHHHHHHHBTTTEEEESCHHHHH
T ss_pred CCCccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCC-CCcCCCCHHHHHHHhhcCCEEEECCHHHHH
Confidence 4557899999999999999999999932289999999999999887643 333444321 1 13578888998888
Q ss_pred cCCcEEEEccChhh---------------HHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCeEEE
Q 014700 198 LGADYCLHAMPVQF---------------SSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIAL 262 (420)
Q Consensus 198 ~~aDiVIlaVp~~~---------------l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~~vl 262 (420)
++||+||+|||... +.++++++.++++++++||..++ +.+.+.+.+.+.+.+. +.....+.+.
T Consensus 81 ~~aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~ST-v~~g~~~~l~~~l~~~-~~~~~d~~V~ 158 (467)
T 2q3e_A 81 KEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKST-VPVRAAESIRRIFDAN-TKPNLNLQVL 158 (467)
T ss_dssp HHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSC-CCTTHHHHHHHHHHHT-CCTTCEEEEE
T ss_pred hcCCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCc-CCchHHHHHHHHHHHh-CCCCCCeEEE
Confidence 99999999998533 67888889998888998888764 5665555566666654 2212345677
Q ss_pred ECcccHHHHh----hcCCeEEEEec----CCHHHHHHHHHHHhcC-CceEEEcCChhHHHHHHHHHHHHHHHHHHHHhcc
Q 014700 263 SGPSFALELM----NKLPTAMVVAS----KDRKLANAVQQLLASK-HLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMN 333 (420)
Q Consensus 263 ~GP~~a~ev~----~g~~t~i~ia~----~d~e~~~~l~~ll~~~-g~~v~~s~Di~g~e~~~alkNv~Ai~~G~~~gl~ 333 (420)
++|.++.+.. ...+..+++++ .+++..++++++|+.. +..+++..|+...+|.|++
T Consensus 159 ~~Pe~~~~G~~~~d~~~~~rivvGg~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~ae~~Kl~--------------- 223 (467)
T 2q3e_A 159 SNPEFLAEGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEHWVPREKILTTNTWSSELSKLA--------------- 223 (467)
T ss_dssp ECCCCCCTTSHHHHHHSCSCEEEECCSSHHHHHHHHHHHHHHTTTSCGGGEEEECHHHHHHHHHH---------------
T ss_pred eCHHHhhcccchhhccCCCEEEECCCCCCCCHHHHHHHHHHHHHhccCCeEEecCHHHHHHHHHH---------------
Confidence 8888765311 12333455666 3677889999999987 6556666777666776544
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHcCCChhhhhhccccc
Q 014700 334 LGNNSMAALVAQGCSEIRWLATKMGAKPATITGLSGTG 371 (420)
Q Consensus 334 lg~N~~~al~~~~~~E~~~lA~a~Gi~~~t~~~l~g~g 371 (420)
.|...++....++|+..+|+++|++++++.+..+..
T Consensus 224 --~N~~~a~~ia~~nE~~~l~~~~Gid~~~v~~~~~~~ 259 (467)
T 2q3e_A 224 --ANAFLAQRISSINSISALCEATGADVEEVATAIGMD 259 (467)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHTS
T ss_pred --HHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHcCC
Confidence 455677888999999999999999999998876544
No 46
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=99.82 E-value=8.7e-20 Score=176.97 Aligned_cols=222 Identities=17% Similarity=0.127 Sum_probs=155.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEE
Q 014700 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (420)
Q Consensus 126 ~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIl 205 (420)
+||||+|||+|.||.++|..|+++| ++|++|+ ++++++.+.+.| +...++++++++++|+||+
T Consensus 2 ~~m~i~iiG~G~~G~~~a~~l~~~g--~~V~~~~-~~~~~~~~~~~g--------------~~~~~~~~~~~~~~D~vi~ 64 (295)
T 1yb4_A 2 NAMKLGFIGLGIMGSPMAINLARAG--HQLHVTT-IGPVADELLSLG--------------AVNVETARQVTEFADIIFI 64 (295)
T ss_dssp --CEEEECCCSTTHHHHHHHHHHTT--CEEEECC-SSCCCHHHHTTT--------------CBCCSSHHHHHHTCSEEEE
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCC--CEEEEEc-CHHHHHHHHHcC--------------CcccCCHHHHHhcCCEEEE
Confidence 4689999999999999999999998 8999999 887777776643 2234578888889999999
Q ss_pred ccChhh-HHHHHH---HhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCeEEEECcccHHHH--hhcCCeEE
Q 014700 206 AMPVQF-SSSFLE---GISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALEL--MNKLPTAM 279 (420)
Q Consensus 206 aVp~~~-l~~vl~---~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~~vl~GP~~a~ev--~~g~~t~i 279 (420)
|+|... +++++. ++.+.++++++||++++|. +.+.+.+.+.+.+. .+.++..|...... ..+.. .+
T Consensus 65 ~vp~~~~~~~v~~~~~~l~~~l~~~~~vv~~s~~~-~~~~~~l~~~~~~~------g~~~~~~p~~~~~~~a~~g~~-~~ 136 (295)
T 1yb4_A 65 MVPDTPQVEDVLFGEHGCAKTSLQGKTIVDMSSIS-PIETKRFAQRVNEM------GADYLDAPVSGGEIGAREGTL-SI 136 (295)
T ss_dssp CCSSHHHHHHHHHSTTSSTTSCCTTEEEEECSCCC-HHHHHHHHHHHHTT------TEEEEECCEESHHHHHHHTCE-EE
T ss_pred ECCCHHHHHHHHhCchhHhhcCCCCCEEEECCCCC-HHHHHHHHHHHHHc------CCeEEEccCCCCHHHHHcCCe-EE
Confidence 998654 888887 7888888899999998863 22223344444331 23344555443321 12332 23
Q ss_pred EEecCCHHHHHHHHHHHhcCCceEEEcCChhHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHcCC
Q 014700 280 VVASKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGA 359 (420)
Q Consensus 280 ~ia~~d~e~~~~l~~ll~~~g~~v~~s~Di~g~e~~~alkNv~Ai~~G~~~gl~lg~N~~~al~~~~~~E~~~lA~a~Gi 359 (420)
+.+.+++..++++++|+..|+.+++.++.....|.|++ +|....++..++.|+..++++.|+
T Consensus 137 -~~~~~~~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~-----------------~n~~~~~~~~~~~E~~~l~~~~G~ 198 (295)
T 1yb4_A 137 -MVGGEQKVFDRVKPLFDILGKNITLVGGNGDGQTCKVA-----------------NQIIVALNIEAVSEALVFASKAGA 198 (295)
T ss_dssp -EEESCHHHHHHHHHHHHHHEEEEEEEESTTHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred -EECCCHHHHHHHHHHHHHhcCCEEEeCCCCHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHcCC
Confidence 34458888999999999999988887776555555543 445566778899999999999999
Q ss_pred Chhhhhhccccchh-----hhhhcccCCCCcccccc
Q 014700 360 KPATITGLSGTGDI-----MLTCFVNLSRNRTVGVR 390 (420)
Q Consensus 360 ~~~t~~~l~g~gdl-----~~t~~~~~sRn~~~G~~ 390 (420)
+++++.++...++. .........|+++.|+.
T Consensus 199 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~~ 234 (295)
T 1yb4_A 199 DPVRVRQALMGGFASSRILEVHGERMINRTFEPGFK 234 (295)
T ss_dssp CHHHHHHHHTSSSSCBHHHHHHHHHHHTTCCCCSSB
T ss_pred CHHHHHHHHHcCCCCCHHHHHhhHHHhcCCCCCCCc
Confidence 99988876543331 11122344566666654
No 47
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=99.82 E-value=9.6e-20 Score=186.63 Aligned_cols=212 Identities=23% Similarity=0.232 Sum_probs=155.8
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCC--C---CCceEEeCCHHHhccCC
Q 014700 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQK--L---PENVIATTDAKTALLGA 200 (420)
Q Consensus 126 ~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~--l---~~~i~a~td~~eal~~a 200 (420)
.+|||+|||+|.||.++|..|++ | ++|++||+++++++.+++. ..+.+.++.. + ..++.+++|+++++++|
T Consensus 35 ~~mkIaVIGlG~mG~~lA~~La~-G--~~V~~~D~~~~~v~~l~~g-~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~~a 110 (432)
T 3pid_A 35 EFMKITISGTGYVGLSNGVLIAQ-N--HEVVALDIVQAKVDMLNQK-ISPIVDKEIQEYLAEKPLNFRATTDKHDAYRNA 110 (432)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHT-T--SEEEEECSCHHHHHHHHTT-CCSSCCHHHHHHHHHSCCCEEEESCHHHHHTTC
T ss_pred CCCEEEEECcCHHHHHHHHHHHc-C--CeEEEEecCHHHhhHHhcc-CCccccccHHHHHhhccCCeEEEcCHHHHHhCC
Confidence 47899999999999999999998 8 9999999999999999873 3333333221 1 23688999999999999
Q ss_pred cEEEEccChh-----------hHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCeEEEECcccHH
Q 014700 201 DYCLHAMPVQ-----------FSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFAL 269 (420)
Q Consensus 201 DiVIlaVp~~-----------~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~~vl~GP~~a~ 269 (420)
|+||+|||+. +++++++.+.+ ++++++||..+ ++.+.+.+.+.+.+ +. . .+.+.|.+..
T Consensus 111 DvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~S-Tv~pgtt~~l~~~l----~~--~--~v~~sPe~~~ 180 (432)
T 3pid_A 111 DYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKS-TIPVGFTRDIKERL----GI--D--NVIFSPEFLR 180 (432)
T ss_dssp SEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECS-CCCTTHHHHHHHHH----TC--C--CEEECCCCCC
T ss_pred CEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeC-CCChHHHHHHHHHH----hh--c--cEeecCccCC
Confidence 9999999975 68899999999 88999998766 57777655554433 32 1 2445777654
Q ss_pred HHh----hcCCeEEEEecCCHHHHHHHHHHHhc--C--CceEEEcCChhHHHHHHHHHHHHHHHHHHHHhcccchhHHHH
Q 014700 270 ELM----NKLPTAMVVASKDRKLANAVQQLLAS--K--HLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAA 341 (420)
Q Consensus 270 ev~----~g~~t~i~ia~~d~e~~~~l~~ll~~--~--g~~v~~s~Di~g~e~~~alkNv~Ai~~G~~~gl~lg~N~~~a 341 (420)
+.. ...+..+++++ +.+.++++.++|.. . +..+.. .++...|+ .|+.+|...+
T Consensus 181 ~G~A~~~~l~p~rIvvG~-~~~~~~~~~~ll~~~~~~~~~~v~~-~~~~~AE~-----------------~Kl~~N~~~a 241 (432)
T 3pid_A 181 EGRALYDNLHPSRIVIGE-RSARAERFADLLKEGAIKQDIPTLF-TDSTEAEA-----------------IKLFANTYLA 241 (432)
T ss_dssp TTSHHHHHHSCSCEEESS-CSHHHHHHHHHHHHHCSSSSCCEEE-CCHHHHHH-----------------HHHHHHHHHH
T ss_pred cchhhhcccCCceEEecC-CHHHHHHHHHHHHhhhccCCCeEEe-cCccHHHH-----------------HHHHHHHHHH
Confidence 321 12333455554 45677889999975 2 223443 45544444 4466788888
Q ss_pred HHHHHHHHHHHHHHHcCCChhhhhhcccc
Q 014700 342 LVAQGCSEIRWLATKMGAKPATITGLSGT 370 (420)
Q Consensus 342 l~~~~~~E~~~lA~a~Gi~~~t~~~l~g~ 370 (420)
+....++|+..+|+++|+|++++++..+.
T Consensus 242 ~~Ia~~nEl~~lae~~GiD~~~v~~~~~~ 270 (432)
T 3pid_A 242 LRVAYFNELDSYAESQGLNSKQIIEGVCL 270 (432)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHcc
Confidence 99999999999999999999999886553
No 48
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=99.81 E-value=1.2e-19 Score=189.00 Aligned_cols=212 Identities=9% Similarity=0.079 Sum_probs=152.9
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhc---cCCcEEE
Q 014700 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL---LGADYCL 204 (420)
Q Consensus 128 mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal---~~aDiVI 204 (420)
|||+|||+|.||.++|..|+++| ++|.+|+|++++++.+.+... ++ .++..++++++++ +++|+||
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G--~~V~v~dr~~~~~~~l~~~~~-----~g----~gi~~~~~~~e~v~~l~~aDvVi 71 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHG--FVVCAFNRTVSKVDDFLANEA-----KG----TKVLGAHSLEEMVSKLKKPRRII 71 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTT--CCEEEECSSTHHHHHHHHTTT-----TT----SSCEECSSHHHHHHHBCSSCEEE
T ss_pred CeEEEEChHHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHHHhccc-----cC----CCeEEeCCHHHHHhhccCCCEEE
Confidence 78999999999999999999998 899999999999988887210 01 2356677888876 4899999
Q ss_pred EccChh-hHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCeEEEECcccHHHHhhcCCeEEEEec
Q 014700 205 HAMPVQ-FSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVAS 283 (420)
Q Consensus 205 laVp~~-~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~~vl~GP~~a~ev~~g~~t~i~ia~ 283 (420)
+|||+. .++++++++.++++++++||+++||...++ ..+.+.+.+. | +.++.+|....+...+.+..++.+
T Consensus 72 laVp~~~~v~~vl~~l~~~l~~g~iII~~s~~~~~~~-~~l~~~l~~~-g-----~~~v~~pv~g~~~~a~~g~~i~~g- 143 (482)
T 2pgd_A 72 LLVKAGQAVDNFIEKLVPLLDIGDIIIDGGNSEYRDT-MRRCRDLKDK-G-----ILFVGSGVSGGEDGARYGPSLMPG- 143 (482)
T ss_dssp ECSCTTHHHHHHHHHHHHHCCTTCEEEECSCCCHHHH-HHHHHHHHHT-T-----CEEEEEEEESHHHHHHHCCEEEEE-
T ss_pred EeCCChHHHHHHHHHHHhhcCCCCEEEECCCCCHHHH-HHHHHHHHHc-C-----CeEeCCCCCCChhhhccCCeEEeC-
Confidence 999985 799999999999999999999999876543 2234444432 2 234455655444332223344444
Q ss_pred CCHHHHHHHHHHHhcCCceEEEcCChhHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHc-CCChh
Q 014700 284 KDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKM-GAKPA 362 (420)
Q Consensus 284 ~d~e~~~~l~~ll~~~g~~v~~s~Di~g~e~~~alkNv~Ai~~G~~~gl~lg~N~~~al~~~~~~E~~~lA~a~-Gi~~~ 362 (420)
.+++..++++++|+..+.++. ++..+..+.+ ..|....+|+.+|....++.+++.|+.+++++. |++++
T Consensus 144 g~~e~~~~v~~ll~~~g~~v~--d~~~~~~~~g--------~~g~g~~~Kl~~N~~~~~~~~~i~Ea~~l~~~~~G~~~~ 213 (482)
T 2pgd_A 144 GNKEAWPHIKAIFQGIAAKVG--TGEPCCDWVG--------DDGAGHFVKMVHNGIEYGDMQLICEAYHLMKDVLGLGHK 213 (482)
T ss_dssp ECTTTHHHHHHHHHHHSCBCT--TSCBSCCCCE--------ETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHH
T ss_pred CCHHHHHHHHHHHHHhhhhcc--CCCcceEEEC--------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHH
Confidence 467788999999998887651 1110000100 013344556778888888999999999999999 99999
Q ss_pred hhhhcc
Q 014700 363 TITGLS 368 (420)
Q Consensus 363 t~~~l~ 368 (420)
++.++.
T Consensus 214 ~~~~~~ 219 (482)
T 2pgd_A 214 EMAKAF 219 (482)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988765
No 49
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=99.81 E-value=4.2e-19 Score=178.27 Aligned_cols=206 Identities=8% Similarity=0.045 Sum_probs=147.4
Q ss_pred chhhcCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCC
Q 014700 121 TDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGA 200 (420)
Q Consensus 121 ~~~~~~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~a 200 (420)
.++|..+|||+|||+|.||..||..|+++| ++|++|+|++++++.+.+.+ +..+++++++++++
T Consensus 16 ~~~Mm~~mkIgiIGlG~mG~~~A~~L~~~G--~~V~v~dr~~~~~~~l~~~g--------------~~~~~s~~e~~~~a 79 (358)
T 4e21_A 16 ENLYFQSMQIGMIGLGRMGADMVRRLRKGG--HECVVYDLNVNAVQALEREG--------------IAGARSIEEFCAKL 79 (358)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHTTT--------------CBCCSSHHHHHHHS
T ss_pred chhhhcCCEEEEECchHHHHHHHHHHHhCC--CEEEEEeCCHHHHHHHHHCC--------------CEEeCCHHHHHhcC
Confidence 356777799999999999999999999998 99999999999998888754 23456888888888
Q ss_pred ---cEEEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCeEEEECcccHHHHhhcCCe
Q 014700 201 ---DYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPT 277 (420)
Q Consensus 201 ---DiVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~~vl~GP~~a~ev~~g~~t 277 (420)
|+||+|||...++++++++.+.++++++||+++++. +.+...+.+.+.+. |....+..+.+||..+.+ |.
T Consensus 80 ~~~DvVi~~vp~~~v~~vl~~l~~~l~~g~iiId~st~~-~~~~~~~~~~l~~~-g~~~vdapVsGg~~~a~~---G~-- 152 (358)
T 4e21_A 80 VKPRVVWLMVPAAVVDSMLQRMTPLLAANDIVIDGGNSH-YQDDIRRADQMRAQ-GITYVDVGTSGGIFGLER---GY-- 152 (358)
T ss_dssp CSSCEEEECSCGGGHHHHHHHHGGGCCTTCEEEECSSCC-HHHHHHHHHHHHTT-TCEEEEEEEECGGGHHHH---CC--
T ss_pred CCCCEEEEeCCHHHHHHHHHHHHhhCCCCCEEEeCCCCC-hHHHHHHHHHHHHC-CCEEEeCCCCCCHHHHhc---CC--
Confidence 999999998899999999999999999999998754 33333344444332 221123334444443332 43
Q ss_pred EEEEecCCHHHHHHHHHHHhcCC--------------------ceEEEcCChhHHHHHHHHHHHHHHHHHHHHhcccchh
Q 014700 278 AMVVASKDRKLANAVQQLLASKH--------------------LRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNN 337 (420)
Q Consensus 278 ~i~ia~~d~e~~~~l~~ll~~~g--------------------~~v~~s~Di~g~e~~~alkNv~Ai~~G~~~gl~lg~N 337 (420)
.+ +.+++++.+++++++|+..+ ..+.+..+.-..++ +|+.+|
T Consensus 153 ~i-m~GG~~~a~~~~~~ll~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~G~~G~g~~-----------------~Kl~~n 214 (358)
T 4e21_A 153 CL-MIGGEKQAVERLDPVFRTLAPGIGAAPRTPGREKREGTAELGYLHCGPSGAGHF-----------------VKMVHN 214 (358)
T ss_dssp EE-EEESCHHHHHHTHHHHHHHSCCGGGSCCCTTGGGCCSSGGGTEEEEESTTHHHH-----------------HHHHHH
T ss_pred ee-eecCCHHHHHHHHHHHHHhccccccCcccccccccccccccceEEECCccHHHH-----------------HHHHHH
Confidence 33 44567889999999999877 35665655432233 334456
Q ss_pred HHHHHHHHHHHHHHHHHHHc------------------------CCChhhhhhc
Q 014700 338 SMAALVAQGCSEIRWLATKM------------------------GAKPATITGL 367 (420)
Q Consensus 338 ~~~al~~~~~~E~~~lA~a~------------------------Gi~~~t~~~l 367 (420)
.+......++.|...++++. |++++.+++.
T Consensus 215 ~l~~~~i~~~aE~~~la~~a~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~~~ 268 (358)
T 4e21_A 215 GIEYGLMAAYAEGLNILHHANAGKEGQGADAETAPLRNPDFYRYDLDLADITEV 268 (358)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCC--------------CGGGCCCCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcccccccccccccccccccchhcccCCCHHHHHHH
Confidence 66667778899999999998 7888888764
No 50
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=99.81 E-value=1.2e-19 Score=189.00 Aligned_cols=207 Identities=15% Similarity=0.136 Sum_probs=149.7
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhcc---CCcEEE
Q 014700 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL---GADYCL 204 (420)
Q Consensus 128 mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~---~aDiVI 204 (420)
|||+|||+|.||+++|..|+++| ++|++|+|++++++.+.+.+... + .+.++..++++++++. ++|+||
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G--~~V~v~dr~~~~~~~l~~~~g~~---~---~~~~i~~~~~~~e~v~~l~~aDvVi 73 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKG--FKVAVFNRTYSKSEEFMKANASA---P---FAGNLKAFETMEAFAASLKKPRKAL 73 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTT--CCEEEECSSHHHHHHHHHHTTTS---T---TGGGEEECSCHHHHHHHBCSSCEEE
T ss_pred CEEEEEChHHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHhcCCC---C---CCCCeEEECCHHHHHhcccCCCEEE
Confidence 68999999999999999999998 89999999999999888752111 1 1234677788888766 599999
Q ss_pred EccChh-hHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCeEEEECcccHHH-HhhcCCeEEEEe
Q 014700 205 HAMPVQ-FSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALE-LMNKLPTAMVVA 282 (420)
Q Consensus 205 laVp~~-~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~~vl~GP~~a~e-v~~g~~t~i~ia 282 (420)
+|||+. .++++++++.+.++++++||+++||....+ ..+.+.+.+. | ..++..|....+ .....+ .++++
T Consensus 74 laVp~~~~v~~vl~~l~~~l~~g~iIId~sng~~~~~-~~l~~~l~~~-g-----~~~v~~pv~gg~~~a~~g~-~i~~g 145 (478)
T 1pgj_A 74 ILVQAGAATDSTIEQLKKVFEKGDILVDTGNAHFKDQ-GRRAQQLEAA-G-----LRFLGMGISGGEEGARKGP-AFFPG 145 (478)
T ss_dssp ECCCCSHHHHHHHHHHHHHCCTTCEEEECCCCCHHHH-HHHHHHHHTT-T-----CEEEEEEEESHHHHHHHCC-EEEEE
T ss_pred EecCChHHHHHHHHHHHhhCCCCCEEEECCCCChHHH-HHHHHHHHHC-C-----CeEEEeeccCCHHHHhcCC-eEecc
Confidence 999984 799999999999999999999999876443 2233444331 2 223333333222 222233 34444
Q ss_pred cCCHHHHHHHHHHHhcCCce-------EEEcCChhHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHH
Q 014700 283 SKDRKLANAVQQLLASKHLR-------ISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLAT 355 (420)
Q Consensus 283 ~~d~e~~~~l~~ll~~~g~~-------v~~s~Di~g~e~~~alkNv~Ai~~G~~~gl~lg~N~~~al~~~~~~E~~~lA~ 355 (420)
.+++..+.++++|+..+.. +.+..+. |....+|+.+|....++.+++.|+.++++
T Consensus 146 -g~~~~~~~v~~ll~~~g~~~~dg~~~v~~~g~~-----------------G~g~~~Kl~~N~~~~~~~~~i~Ea~~l~~ 207 (478)
T 1pgj_A 146 -GTLSVWEEIRPIVEAAAAKADDGRPCVTMNGSG-----------------GAGSCVKMYHNSGEYAILQIWGEVFDILR 207 (478)
T ss_dssp -ECHHHHHHHHHHHHHHSCBCTTSCBSCCCCCST-----------------THHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHHHHhcccccCCCeeEEEeCCc-----------------hHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 4788899999999987765 2333221 23334456678778888999999999999
Q ss_pred HcCCChhhhhhcc
Q 014700 356 KMGAKPATITGLS 368 (420)
Q Consensus 356 a~Gi~~~t~~~l~ 368 (420)
++|++++++.++.
T Consensus 208 ~~G~~~~~~~~l~ 220 (478)
T 1pgj_A 208 AMGLNNDEVAAVL 220 (478)
T ss_dssp HTTCCHHHHHHHH
T ss_pred HcCCCHHHHHHHH
Confidence 9999999888754
No 51
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=99.80 E-value=1.5e-18 Score=176.93 Aligned_cols=213 Identities=18% Similarity=0.164 Sum_probs=155.1
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCC-----CCCceEEeCCHHHhccCCcE
Q 014700 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQK-----LPENVIATTDAKTALLGADY 202 (420)
Q Consensus 128 mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~-----l~~~i~a~td~~eal~~aDi 202 (420)
|||+|||+|+||.++|..|++ | |+|++|+|++++++.+++.+... +.++.. .+.++.++++++++++++|+
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G--~~V~~~d~~~~~~~~l~~~~~~i-~e~~l~~~~~~~~~~l~~t~~~~~~~~~aDv 76 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-Q--NEVTIVDILPSKVDKINNGLSPI-QDEYIEYYLKSKQLSIKATLDSKAAYKEAEL 76 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-T--SEEEEECSCHHHHHHHHTTCCSS-CCHHHHHHHHHSCCCEEEESCHHHHHHHCSE
T ss_pred CEEEEECCCHHHHHHHHHHhC-C--CEEEEEECCHHHHHHHHcCCCCc-CCCCHHHHHHhccCcEEEeCCHHHHhcCCCE
Confidence 699999999999999999998 8 99999999999999998765321 111100 02246778888888889999
Q ss_pred EEEccChh-----------hHHHHHHHhhhcCCCCCeEEE-eccCCCcchhhhHHHHHHHHhCCCCCCeEEEECcccHHH
Q 014700 203 CLHAMPVQ-----------FSSSFLEGISDYVDPGLPFIS-LSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALE 270 (420)
Q Consensus 203 VIlaVp~~-----------~l~~vl~~i~~~l~~~~iVVs-~snGi~~~t~~~~se~l~~~lg~~~~~~~vl~GP~~a~e 270 (420)
||+|||+. +++++++++.+ ++++++||. .+++. .+. +.+.+.++.. .++++|.+..+
T Consensus 77 viiavpt~~~~~~~~~dl~~v~~v~~~i~~-l~~~~iVV~~ST~~~--g~~----~~l~~~~~~~----~v~~~Pe~~~~ 145 (402)
T 1dlj_A 77 VIIATPTNYNSRINYFDTQHVETVIKEVLS-VNSHATLIIKSTIPI--GFI----TEMRQKFQTD----RIIFSPEFLRE 145 (402)
T ss_dssp EEECCCCCEETTTTEECCHHHHHHHHHHHH-HCSSCEEEECSCCCT--THH----HHHHHHTTCS----CEEECCCCCCT
T ss_pred EEEecCCCcccCCCCccHHHHHHHHHHHHh-hCCCCEEEEeCCCCc--cHH----HHHHHHhCCC----eEEECCccccC
Confidence 99999986 59999999988 888998887 44443 332 3344444431 45677776543
Q ss_pred Hh----hcCCeEEEEecCCH------HHHHHHHHHHhcCCce---EEEcCChhHHHHHHHHHHHHHHHHHHHHhcccchh
Q 014700 271 LM----NKLPTAMVVASKDR------KLANAVQQLLASKHLR---ISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNN 337 (420)
Q Consensus 271 v~----~g~~t~i~ia~~d~------e~~~~l~~ll~~~g~~---v~~s~Di~g~e~~~alkNv~Ai~~G~~~gl~lg~N 337 (420)
.. ...+..+++++.+. +.++.+.++|...++. ++...|+...+|.|++.|.
T Consensus 146 G~a~~~~~~~~riviG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~di~~ae~~Kl~~N~---------------- 209 (402)
T 1dlj_A 146 SKALYDNLYPSRIIVSCEENDSPKVKADAEKFALLLKSAAKKNNVPVLIMGASEAEAVKLFANT---------------- 209 (402)
T ss_dssp TSTTHHHHSCSCEEEECCTTSCHHHHHHHHHHHHHHHHHCSCSCCCEEEECHHHHHHHHHHHHH----------------
T ss_pred cchhhcccCCCEEEEeCCCcccchhHHHHHHHHHHHhhhhccCCceEEecChHHHHHHHHHHHH----------------
Confidence 11 12233455666541 5678899999765543 4667789999999877665
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCChhhhhhccccch
Q 014700 338 SMAALVAQGCSEIRWLATKMGAKPATITGLSGTGD 372 (420)
Q Consensus 338 ~~~al~~~~~~E~~~lA~a~Gi~~~t~~~l~g~gd 372 (420)
..++....++|+..+|+++|++.+.+.+..+.+.
T Consensus 210 -~~a~~ia~~nE~~~l~~~~Gid~~~v~~~~~~~~ 243 (402)
T 1dlj_A 210 -YLALRVAYFNELDTYAESRKLNSHMIIQGISYDD 243 (402)
T ss_dssp -HHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTST
T ss_pred -HHHHHHHHHHHHHHHHHHhCCCHHHHHHHhccCC
Confidence 3456677899999999999999999998766554
No 52
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=99.79 E-value=6.5e-19 Score=184.03 Aligned_cols=205 Identities=9% Similarity=0.045 Sum_probs=150.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHH-hcCCCCCCCCCCCCCceEEeCCHHHhccC---CcE
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE-KHCNCRYFPEQKLPENVIATTDAKTALLG---ADY 202 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~-~g~~~~~l~~~~l~~~i~a~td~~eal~~---aDi 202 (420)
..+|+|||+|.||++||..|+++| ++|++|+|++++++.+.+ ... + .++..+++++++++. +|+
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G--~~V~v~dr~~~~~~~l~~~~~~------~----~gi~~~~s~~e~v~~l~~aDv 77 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHG--FTVCAYNRTQSKVDHFLANEAK------G----KSIIGATSIEDFISKLKRPRK 77 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSHHHHHHHHTTTT------T----SSEECCSSHHHHHHTSCSSCE
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHccccc------C----CCeEEeCCHHHHHhcCCCCCE
Confidence 359999999999999999999999 899999999999998887 311 0 245667788887776 999
Q ss_pred EEEccCh-hhHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCeEEEECcccHHHHhhcCCeEEEE
Q 014700 203 CLHAMPV-QFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVV 281 (420)
Q Consensus 203 VIlaVp~-~~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~~vl~GP~~a~ev~~g~~t~i~i 281 (420)
||+|||+ ..++++++++.+.++++++||+++++....+ ..+.+.+.+. |. .++..|....+...+..+.++.
T Consensus 78 Vil~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~~~~~~~-~~l~~~l~~~-g~-----~~v~~pVsgg~~~a~~G~~im~ 150 (497)
T 2p4q_A 78 VMLLVKAGAPVDALINQIVPLLEKGDIIIDGGNSHFPDS-NRRYEELKKK-GI-----LFVGSGVSGGEEGARYGPSLMP 150 (497)
T ss_dssp EEECCCSSHHHHHHHHHHGGGCCTTCEEEECSCCCHHHH-HHHHHHHHHT-TC-----EEEEEEEESHHHHHHHCCEEEE
T ss_pred EEEEcCChHHHHHHHHHHHHhCCCCCEEEECCCCChhHH-HHHHHHHHHc-CC-----ceeCCCcccChhHhhcCCeEEe
Confidence 9999998 5899999999999999999999998765433 2334444432 22 2333343322211111223444
Q ss_pred ecCCHHHHHHHHHHHhcCCce------EEEcCChhHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHH
Q 014700 282 ASKDRKLANAVQQLLASKHLR------ISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLAT 355 (420)
Q Consensus 282 a~~d~e~~~~l~~ll~~~g~~------v~~s~Di~g~e~~~alkNv~Ai~~G~~~gl~lg~N~~~al~~~~~~E~~~lA~ 355 (420)
+.+++..++++++|+..+.. +.+.++ .|....+|+.+|.....+.+++.|+..+++
T Consensus 151 -gg~~e~~~~v~~ll~~~g~~~dGe~~v~~vg~-----------------~G~g~~~Kl~~N~~~~~~~~~laEa~~l~~ 212 (497)
T 2p4q_A 151 -GGSEEAWPHIKNIFQSISAKSDGEPCCEWVGP-----------------AGAGHYVKMVHNGIEYGDMQLICEAYDIMK 212 (497)
T ss_dssp -EECGGGHHHHHHHHHHHSCEETTEESCCCCEE-----------------TTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -cCCHHHHHHHHHHHHHhcCccCCCCceEEECC-----------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45778889999999987766 222222 133445667788888889999999999999
Q ss_pred H-cCCChhhhhhcc
Q 014700 356 K-MGAKPATITGLS 368 (420)
Q Consensus 356 a-~Gi~~~t~~~l~ 368 (420)
+ +|++++++.++.
T Consensus 213 ~~lGl~~~~~~~~~ 226 (497)
T 2p4q_A 213 RLGGFTDKEISDVF 226 (497)
T ss_dssp HTTCCCHHHHHHHH
T ss_pred HccCCCHHHHHHHH
Confidence 9 799999988765
No 53
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=99.79 E-value=1.5e-18 Score=172.52 Aligned_cols=226 Identities=20% Similarity=0.172 Sum_probs=147.9
Q ss_pred cCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCC--Cce-EEeCCHHHhccCCc
Q 014700 125 ERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLP--ENV-IATTDAKTALLGAD 201 (420)
Q Consensus 125 ~~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~--~~i-~a~td~~eal~~aD 201 (420)
+.+|||+|||+|+||+.+|..|+++| ++|++|+|++++++.+++.+. .++.+..+. ..+ ..+++++++++++|
T Consensus 2 m~~mki~iiG~G~~G~~~a~~L~~~g--~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 77 (359)
T 1bg6_A 2 IESKTYAVLGLGNGGHAFAAYLALKG--QSVLAWDIDAQRIKEIQDRGA--IIAEGPGLAGTAHPDLLTSDIGLAVKDAD 77 (359)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHHHTS--EEEESSSCCEEECCSEEESCHHHHHTTCS
T ss_pred CCcCeEEEECCCHHHHHHHHHHHhCC--CEEEEEeCCHHHHHHHHhcCC--eEEeccccccccccceecCCHHHHHhcCC
Confidence 34589999999999999999999998 899999999999998887631 111111111 122 35678888888999
Q ss_pred EEEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCC--------CCCeE-EEECcccHHHHh
Q 014700 202 YCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNP--------RQPFI-ALSGPSFALELM 272 (420)
Q Consensus 202 iVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~--------~~~~~-vl~GP~~a~ev~ 272 (420)
+||+|||+...+++++++.++++++++||++ +|+...+.+ +.+.+.+. +.. ..++. ...||+++....
T Consensus 78 ~vi~~v~~~~~~~~~~~l~~~l~~~~~vv~~-~~~~~~~~~-~~~~l~~~-~~~~v~~~~~~~~~~~~~~~gpg~v~~~~ 154 (359)
T 1bg6_A 78 VILIVVPAIHHASIAANIASYISEGQLIILN-PGATGGALE-FRKILREN-GAPEVTIGETSSMLFTCRSERPGQVTVNA 154 (359)
T ss_dssp EEEECSCGGGHHHHHHHHGGGCCTTCEEEES-SCCSSHHHH-HHHHHHHT-TCCCCEEEEESSCSEEEECSSTTEEEEEE
T ss_pred EEEEeCCchHHHHHHHHHHHhCCCCCEEEEc-CCCchHHHH-HHHHHHhc-CCCCeEEEEecCCcEEEEeCCCCEEEEEE
Confidence 9999999999999999999999999998888 454433222 34444442 210 01222 234555433211
Q ss_pred hcCCeEEEEe----cCCHHHHHHHHHHHhcCCceEEEcCChhHHHHHHHHHHHHHH--------HHHHHH----hcccc-
Q 014700 273 NKLPTAMVVA----SKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAI--------AAGIVV----GMNLG- 335 (420)
Q Consensus 273 ~g~~t~i~ia----~~d~e~~~~l~~ll~~~g~~v~~s~Di~g~e~~~alkNv~Ai--------~~G~~~----gl~lg- 335 (420)
. ... +.++ +.+++.++.++++|.. + ..++|+ |.++++|+.++ .++..+ .+.++
T Consensus 155 ~-~~~-~~~g~~~~~~~~~~~~~l~~~~~~--~--~~~~di----~~k~~~nvn~~~n~~~al~~~~~~~~~~~~~~~~~ 224 (359)
T 1bg6_A 155 I-KGA-MDFACLPAAKAGWALEQIGSVLPQ--Y--VAVENV----LHTSLTNVNAVMHPLPTLLNAARCESGTPFQYYLE 224 (359)
T ss_dssp E-CSC-EEEEEESGGGHHHHHHHHTTTCTT--E--EECSCH----HHHHHCCHHHHHTHHHHHTTHHHHHTTCCCBHHHH
T ss_pred e-ecc-eEEEeccccccHHHHHHHHHHhhh--c--EEcCCh----HhhhccCCCccccHHHHHhhhchhhcCCccchhhc
Confidence 0 011 1222 3445567788888854 3 345665 78888875443 222221 11112
Q ss_pred --hhHHHHHHHHHHHHHHHHHHHcCCChhhhhhc
Q 014700 336 --NNSMAALVAQGCSEIRWLATKMGAKPATITGL 367 (420)
Q Consensus 336 --~N~~~al~~~~~~E~~~lA~a~Gi~~~t~~~l 367 (420)
.+....++.++++|+.++++++|++++++.+.
T Consensus 225 ~~~~~~~~~~~~~~~E~~~va~a~G~~~~~~~~~ 258 (359)
T 1bg6_A 225 GITPSVGSLAEKVDAERIAIAKAFDLNVPSVCEW 258 (359)
T ss_dssp HCCHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhCCCCCcHHHH
Confidence 34467889999999999999999998777664
No 54
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=99.78 E-value=9.8e-18 Score=165.70 Aligned_cols=166 Identities=13% Similarity=0.146 Sum_probs=123.2
Q ss_pred hhcCCCeEEEEcccHHHHHHHHHHHhcCC--CCeEEEEeCCHH--HHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhcc
Q 014700 123 ILERTNKVVVLGGGSFGTAMAAHVANKKS--QLKVYMLMRDPA--VCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL 198 (420)
Q Consensus 123 ~~~~~mkI~IIGaGamG~alA~~La~aG~--~~~V~l~~r~~~--~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~ 198 (420)
.++.+|||+|||+|+||++||..|.++|. .++|++|+|+++ +++.+++.| +.+++++.++++
T Consensus 18 ~~~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~~G--------------~~~~~~~~e~~~ 83 (322)
T 2izz_A 18 LYFQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMG--------------VKLTPHNKETVQ 83 (322)
T ss_dssp ----CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHHHT--------------CEEESCHHHHHH
T ss_pred hccCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHHcC--------------CEEeCChHHHhc
Confidence 55667899999999999999999999862 168999999985 777777644 355667888888
Q ss_pred CCcEEEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCeEEEECcccHHHHhhcCCeE
Q 014700 199 GADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTA 278 (420)
Q Consensus 199 ~aDiVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~~vl~GP~~a~ev~~g~~t~ 278 (420)
++|+||+|||++.++++++++.+.++++++||++++|+..+ .+.+.+.+.++. ...+...|+.+.++..+. .
T Consensus 84 ~aDvVilav~~~~~~~vl~~l~~~l~~~~ivvs~s~gi~~~---~l~~~l~~~~~~---~~vv~~~p~~p~~~~~g~--~ 155 (322)
T 2izz_A 84 HSDVLFLAVKPHIIPFILDEIGADIEDRHIVVSCAAGVTIS---SIEKKLSAFRPA---PRVIRCMTNTPVVVREGA--T 155 (322)
T ss_dssp HCSEEEECSCGGGHHHHHHHHGGGCCTTCEEEECCTTCCHH---HHHHHHHTTSSC---CEEEEEECCGGGGGTCEE--E
T ss_pred cCCEEEEEeCHHHHHHHHHHHHhhcCCCCEEEEeCCCCCHH---HHHHHHhhcCCC---CeEEEEeCCcHHHHcCCe--E
Confidence 99999999999999999999999998899999999998753 344455443332 123445566665554442 3
Q ss_pred EEEecC--CHHHHHHHHHHHhcCCceEEEcCChh
Q 014700 279 MVVASK--DRKLANAVQQLLASKHLRISTSSDVT 310 (420)
Q Consensus 279 i~ia~~--d~e~~~~l~~ll~~~g~~v~~s~Di~ 310 (420)
++.++. +.+..+.++++|+..|+.++..+|+.
T Consensus 156 v~~~g~~~~~~~~~~v~~ll~~~G~~~~~~e~~~ 189 (322)
T 2izz_A 156 VYATGTHAQVEDGRLMEQLLSSVGFCTEVEEDLI 189 (322)
T ss_dssp EEEECTTCCHHHHHHHHHHHHTTEEEEECCGGGH
T ss_pred EEEeCCCCCHHHHHHHHHHHHhCCCEEEeCHHHH
Confidence 333433 37888999999999999887776654
No 55
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=99.78 E-value=6.1e-18 Score=166.02 Aligned_cols=199 Identities=15% Similarity=0.107 Sum_probs=140.0
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEE
Q 014700 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (420)
Q Consensus 126 ~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIl 205 (420)
.+|||+|||+|.||.+||..|+++| ++|++|+|+++.++.+.+.| +...++++++++++|+||+
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G--~~V~~~dr~~~~~~~~~~~g--------------~~~~~~~~e~~~~aDvVi~ 71 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQG--KRVAIWNRSPGKAAALVAAG--------------AHLCESVKAALSASPATIF 71 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTT--CCEEEECSSHHHHHHHHHHT--------------CEECSSHHHHHHHSSEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHCC--------------CeecCCHHHHHhcCCEEEE
Confidence 3689999999999999999999998 89999999999998888764 2456688998999999999
Q ss_pred ccChh-hHHHHHH--HhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCeEEEECcccHHHHhhcCCeEEEEe
Q 014700 206 AMPVQ-FSSSFLE--GISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVA 282 (420)
Q Consensus 206 aVp~~-~l~~vl~--~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~~vl~GP~~a~ev~~g~~t~i~ia 282 (420)
|||.. .+++++. .+.. +.++++||++++ +.+.+.+.+.+.+.+. |. .++.+|........+.....++.
T Consensus 72 ~vp~~~~~~~v~~~~~l~~-~~~g~ivid~st-~~~~~~~~l~~~~~~~-g~-----~~vdapv~g~~~~~~~~~~~i~~ 143 (306)
T 3l6d_A 72 VLLDNHATHEVLGMPGVAR-ALAHRTIVDYTT-NAQDEGLALQGLVNQA-GG-----HYVKGMIVAYPRNVGHRESHSIH 143 (306)
T ss_dssp CCSSHHHHHHHHTSTTHHH-HTTTCEEEECCC-CCTTHHHHHHHHHHHT-TC-----EEEEEEEESCGGGTTCTTCEEEE
T ss_pred EeCCHHHHHHHhcccchhh-ccCCCEEEECCC-CCHHHHHHHHHHHHHc-CC-----eEEecccccCcccccCCceEEEE
Confidence 99965 4888886 6655 467899998875 5555545555555442 32 23333332211011111223445
Q ss_pred cCCHHHHHHHHHHHhcCCceEEEc--CChhHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHcCCC
Q 014700 283 SKDRKLANAVQQLLASKHLRISTS--SDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGAK 360 (420)
Q Consensus 283 ~~d~e~~~~l~~ll~~~g~~v~~s--~Di~g~e~~~alkNv~Ai~~G~~~gl~lg~N~~~al~~~~~~E~~~lA~a~Gi~ 360 (420)
+++++.+++++++|+..+-++++. .+-.| -+.++| ........++.|+..++++.|++
T Consensus 144 gg~~~~~~~~~~ll~~lg~~~~~~~~g~~~g--~g~~~k------------------~~~~~~~~~~~Ea~~la~~~Gld 203 (306)
T 3l6d_A 144 TGDREAFEQHRALLEGLAGHTVFLPWDEALA--FATVLH------------------AHAFAAMVTFFEAVGAGDRFGLP 203 (306)
T ss_dssp EECHHHHHHHHHHHHTTCSEEEECCHHHHHH--HHHHHH------------------HHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCCHHHHHHHHHHHHHhcCCEEEecCCCCcc--HHHHHH------------------HHHHHHHHHHHHHHHHHHHcCCC
Confidence 567899999999999986677665 43111 111222 11223467899999999999999
Q ss_pred hhhhhhcc
Q 014700 361 PATITGLS 368 (420)
Q Consensus 361 ~~t~~~l~ 368 (420)
++++++..
T Consensus 204 ~~~~~~~~ 211 (306)
T 3l6d_A 204 VSKTARLL 211 (306)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998754
No 56
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=99.77 E-value=2.4e-18 Score=159.99 Aligned_cols=171 Identities=15% Similarity=0.198 Sum_probs=132.0
Q ss_pred cCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEE
Q 014700 125 ERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (420)
Q Consensus 125 ~~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVI 204 (420)
..+|||+|||+|+||+++|..|+++| ++|++|+|+++ +++++|+||
T Consensus 17 ~~~~~I~iiG~G~mG~~la~~l~~~g--~~V~~~~~~~~--------------------------------~~~~aD~vi 62 (209)
T 2raf_A 17 FQGMEITIFGKGNMGQAIGHNFEIAG--HEVTYYGSKDQ--------------------------------ATTLGEIVI 62 (209)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHTT--CEEEEECTTCC--------------------------------CSSCCSEEE
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEcCCHH--------------------------------HhccCCEEE
Confidence 44789999999999999999999998 89999998653 356899999
Q ss_pred EccChhhHHHHHHHhhhcCCCCCeEEEeccCCC-cc-------hhhhHHHHHHHHhCCCCCCeEEEE------CcccHHH
Q 014700 205 HAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE-LN-------TLRMMSQIIPQALRNPRQPFIALS------GPSFALE 270 (420)
Q Consensus 205 laVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~-~~-------t~~~~se~l~~~lg~~~~~~~vl~------GP~~a~e 270 (420)
+|+|++.++++++++.+.++ +++|+++++|+. .+ +...+.+.+.+.++. ..++. +|.++.+
T Consensus 63 ~av~~~~~~~v~~~l~~~~~-~~~vi~~~~g~~~~~~~~l~~~~~~~~~~~l~~~l~~----~~vv~~~~~~~~p~~~~~ 137 (209)
T 2raf_A 63 MAVPYPALAALAKQYATQLK-GKIVVDITNPLNFDTWDDLVVPADSSAAQELQQQLPD----SQVLKAFNTTFAATLQSG 137 (209)
T ss_dssp ECSCHHHHHHHHHHTHHHHT-TSEEEECCCCBCTTTSSSBSSCTTCCHHHHHHHHCTT----SEEEECSTTSCHHHHHHS
T ss_pred EcCCcHHHHHHHHHHHHhcC-CCEEEEECCCCCccccccccCCCCCcHHHHHHHHCCC----CcEEEeeecccHhhcccc
Confidence 99999999999999988887 899999999987 33 333456777777653 12333 6777665
Q ss_pred Hhhc-CCeEEEEecCCHHHHHHHHHHHhcCCceEEEcCChhHHHHHHHHHHHHHHHHHHHHhcccchh
Q 014700 271 LMNK-LPTAMVVASKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNN 337 (420)
Q Consensus 271 v~~g-~~t~i~ia~~d~e~~~~l~~ll~~~g~~v~~s~Di~g~e~~~alkNv~Ai~~G~~~gl~lg~N 337 (420)
...+ .+..+.+++.+++..+.++++|+..|++++..+|+.. +.++||+.++..++..+.+++.|
T Consensus 138 ~~~g~~~~~~~~~g~~~~~~~~v~~ll~~~G~~~~~~~~i~~---a~~~K~i~~l~~~~~~~~g~g~~ 202 (209)
T 2raf_A 138 QVNGKEPTTVLVAGNDDSAKQRFTRALADSPLEVKDAGKLKR---ARELEAMGFMQMTLAASEQIGWT 202 (209)
T ss_dssp EETTTEECEEEEEESCHHHHHHHHHHTTTSSCEEEEEESGGG---HHHHHHHHHHHHHHHHTTSSCTT
T ss_pred ccCCCCCceeEEcCCCHHHHHHHHHHHHHcCCceEeCCCHhH---HHHhcchHHHHHHHHHHcCCCch
Confidence 4333 3344556777788899999999999999998888654 55678888888888887766654
No 57
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=99.76 E-value=2.5e-18 Score=164.30 Aligned_cols=212 Identities=11% Similarity=0.125 Sum_probs=144.1
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeC--CHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEE
Q 014700 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMR--DPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (420)
Q Consensus 128 mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r--~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIl 205 (420)
|||+|||+|+||.++|..|+++| ++|++|+| +++.++.+.+.|. . ++++++++++|+||+
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g--~~V~~~~~~~~~~~~~~~~~~g~--------------~--~~~~~~~~~aDvvi~ 62 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRG--VEVVTSLEGRSPSTIERARTVGV--------------T--ETSEEDVYSCPVVIS 62 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTT--CEEEECCTTCCHHHHHHHHHHTC--------------E--ECCHHHHHTSSEEEE
T ss_pred CeEEEEechHHHHHHHHHHHHCC--CeEEEeCCccCHHHHHHHHHCCC--------------c--CCHHHHHhcCCEEEE
Confidence 69999999999999999999998 89999999 7777777776542 2 466777889999999
Q ss_pred ccChhhHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCC-CCCeEEEECcccHHHHhhcCCeEEEEecC
Q 014700 206 AMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNP-RQPFIALSGPSFALELMNKLPTAMVVASK 284 (420)
Q Consensus 206 aVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~-~~~~~vl~GP~~a~ev~~g~~t~i~ia~~ 284 (420)
|||++...+.+.++.+.+++ +||+++ ++.+.+. +.+.+.++.. .....++.+|. ....+.+ +++++.
T Consensus 63 ~v~~~~~~~~~~~~~~~~~~--~vi~~s-~~~~~~~----~~l~~~~~~~g~~~~~v~~~~~---~~~~g~~--~~~~g~ 130 (264)
T 1i36_A 63 AVTPGVALGAARRAGRHVRG--IYVDIN-NISPETV----RMASSLIEKGGFVDAAIMGSVR---RKGADIR--IIASGR 130 (264)
T ss_dssp CSCGGGHHHHHHHHHTTCCS--EEEECS-CCCHHHH----HHHHHHCSSSEEEEEEECSCHH---HHGGGCE--EEEEST
T ss_pred ECCCHHHHHHHHHHHHhcCc--EEEEcc-CCCHHHH----HHHHHHHhhCCeeeeeeeCCcc---ccccCCe--EEecCC
Confidence 99987655556778777765 777764 5665432 2344444331 01122333332 2223433 445554
Q ss_pred CHHHHHHHHHHHhcCCceEEEcCC-hhHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHcCCChhh
Q 014700 285 DRKLANAVQQLLASKHLRISTSSD-VTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGAKPAT 363 (420)
Q Consensus 285 d~e~~~~l~~ll~~~g~~v~~s~D-i~g~e~~~alkNv~Ai~~G~~~gl~lg~N~~~al~~~~~~E~~~lA~a~Gi~~~t 363 (420)
+. +++++ |+..|..++..++ +....|.| +..|.....+..++.|+..+++++|++++.
T Consensus 131 ~~---~~~~~-l~~~g~~~~~~~~~~g~~~~~k-----------------l~~n~~~~~~~~~~~Ea~~la~~~G~~~~~ 189 (264)
T 1i36_A 131 DA---EEFMK-LNRYGLNIEVRGREPGDASAIK-----------------MLRSSYTKGVSALLWETLTAAHRLGLEEDV 189 (264)
T ss_dssp TH---HHHHG-GGGGTCEEEECSSSTTHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred cH---HHhhh-HHHcCCeeEECCCCcCHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHHHcCCcHHH
Confidence 43 78888 9999988766554 54444544 345555567788999999999999999874
Q ss_pred hhhccc-cc-hhhhhhcccCCCCcccccc
Q 014700 364 ITGLSG-TG-DIMLTCFVNLSRNRTVGVR 390 (420)
Q Consensus 364 ~~~l~g-~g-dl~~t~~~~~sRn~~~G~~ 390 (420)
+..+.+ .| ++..++.+..+||++.|+.
T Consensus 190 ~~~~~~~~g~~~~~~~~~~~~~~~~~g~~ 218 (264)
T 1i36_A 190 LEMLEYTEGNDFRESAISRLKSSCIHARR 218 (264)
T ss_dssp HHHHHTTSCSSTHHHHHHHHHHHHHTHHH
T ss_pred HHHHHHhcCccHHHHHHHHhcCCCCcchh
Confidence 322333 23 4545566666788888875
No 58
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=99.76 E-value=4.3e-18 Score=161.83 Aligned_cols=179 Identities=19% Similarity=0.224 Sum_probs=123.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHH--------------HHHHHHhcCCCCCCCCCCCCCceEEeCC
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAV--------------CQSINEKHCNCRYFPEQKLPENVIATTD 192 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~--------------~~~i~~~g~~~~~l~~~~l~~~i~a~td 192 (420)
.|||+|||+|.||.+||..|+++| ++|++|+|+++. .+.+.+.. . . ...++
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~-~-~~~~~ 83 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLG--HEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEH-----------P-H-VHLAA 83 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCHHHHHTCC-------CCHHHHGGGS-----------T-T-CEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC--CEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhc-----------C-c-eeccC
Confidence 689999999999999999999998 999999999886 33332210 0 1 22357
Q ss_pred HHHhccCCcEEEEccChhhHHHHHHHh-hhcCCCCCeEEEeccCC----------CcchhhhHHHHHHHHhCCCC--CCe
Q 014700 193 AKTALLGADYCLHAMPVQFSSSFLEGI-SDYVDPGLPFISLSKGL----------ELNTLRMMSQIIPQALRNPR--QPF 259 (420)
Q Consensus 193 ~~eal~~aDiVIlaVp~~~l~~vl~~i-~~~l~~~~iVVs~snGi----------~~~t~~~~se~l~~~lg~~~--~~~ 259 (420)
+++++++||+||+|||++...+++.++ .+.+ ++++||+++||+ ++++...+.+.+.+.++... ..+
T Consensus 84 ~~e~~~~aDvVilavp~~~~~~~~~~i~~~~l-~g~ivi~~s~~~~~~~G~~~t~~~~~~~~~~~~l~~~l~~~~vv~~~ 162 (245)
T 3dtt_A 84 FADVAAGAELVVNATEGASSIAALTAAGAENL-AGKILVDIANPLDFSHGMPPTLNPVNTDSLGEQIQRTFPEAKVVKTL 162 (245)
T ss_dssp HHHHHHHCSEEEECSCGGGHHHHHHHHCHHHH-TTSEEEECCCCEECTTCSSCEESSCSSCCHHHHHHHHSTTSEEEECS
T ss_pred HHHHHhcCCEEEEccCcHHHHHHHHHhhhhhc-CCCEEEECCCCCCCcCCccccccCCCCccHHHHHHHHCCCCeEEEee
Confidence 788889999999999999988999888 7777 789999999764 33444567788888765310 000
Q ss_pred EEEECcccHHHHh-hcCCeEEEEecCCHHHHHHHHHHHhcCCce-EEEcCChhHHHHHHHHHHH
Q 014700 260 IALSGPSFALELM-NKLPTAMVVASKDRKLANAVQQLLASKHLR-ISTSSDVTGVEIAGALKNV 321 (420)
Q Consensus 260 ~vl~GP~~a~ev~-~g~~t~i~ia~~d~e~~~~l~~ll~~~g~~-v~~s~Di~g~e~~~alkNv 321 (420)
.++.+|....... ...+..+++++.+++..++++++|+..|++ +++..++-.....+.+.|+
T Consensus 163 ~~~~a~v~~~~~~a~~g~~~~~v~g~d~~~~~~v~~ll~~~g~~~~~~~G~~g~a~~~k~~~~~ 226 (245)
T 3dtt_A 163 NTMNASLMVDPGRAAGGDHSVFVSGNDAAAKAEVATLLKSLGHQDVIDLGDITTARGAEMLLPV 226 (245)
T ss_dssp TTSCHHHHHCGGGTGGGCCCEEEECSCHHHHHHHHHHHHHTTCCCEEEEESGGGHHHHHTTHHH
T ss_pred cccCHHHhcCccccCCCCeeEEEECCCHHHHHHHHHHHHHcCCCceeccCcHHHHHHhhhhHHH
Confidence 1112222221111 122334566777899999999999999985 5667776444444444443
No 59
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=99.74 E-value=1.5e-16 Score=151.16 Aligned_cols=229 Identities=14% Similarity=0.183 Sum_probs=137.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCC----eEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcE
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQL----KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADY 202 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~----~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDi 202 (420)
+|||+|||+|+||.+++..|.++| + +|++|+|++++++.+.+.. ++..+++++++++++|+
T Consensus 2 ~~~i~iIG~G~mG~~~a~~l~~~g--~~~~~~V~~~~r~~~~~~~~~~~~-------------g~~~~~~~~e~~~~aDv 66 (247)
T 3gt0_A 2 DKQIGFIGCGNMGMAMIGGMINKN--IVSSNQIICSDLNTANLKNASEKY-------------GLTTTTDNNEVAKNADI 66 (247)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTT--SSCGGGEEEECSCHHHHHHHHHHH-------------CCEECSCHHHHHHHCSE
T ss_pred CCeEEEECccHHHHHHHHHHHhCC--CCCCCeEEEEeCCHHHHHHHHHHh-------------CCEEeCChHHHHHhCCE
Confidence 479999999999999999999998 7 9999999999988887531 23556788888899999
Q ss_pred EEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCeEEEECcccHHHHhhcCCeEEEEe
Q 014700 203 CLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVA 282 (420)
Q Consensus 203 VIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~~vl~GP~~a~ev~~g~~t~i~ia 282 (420)
||+|||++.++++++++.++++++++||++++|+..+ .+.+.++.. ...+..-|+.+.....+. +.++..
T Consensus 67 Vilav~~~~~~~v~~~l~~~l~~~~~vvs~~~gi~~~-------~l~~~~~~~--~~~v~~~p~~p~~~~~g~-~~~~~~ 136 (247)
T 3gt0_A 67 LILSIKPDLYASIINEIKEIIKNDAIIVTIAAGKSIE-------STENAFNKK--VKVVRVMPNTPALVGEGM-SALCPN 136 (247)
T ss_dssp EEECSCTTTHHHHC---CCSSCTTCEEEECSCCSCHH-------HHHHHHCSC--CEEEEEECCGGGGGTCEE-EEEEEC
T ss_pred EEEEeCHHHHHHHHHHHHhhcCCCCEEEEecCCCCHH-------HHHHHhCCC--CcEEEEeCChHHHHcCce-EEEEeC
Confidence 9999999999999999999999999999999998753 344444431 122334466554433332 222222
Q ss_pred -cCCHHHHHHHHHHHhcCCceEEEcCChhHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHcCCCh
Q 014700 283 -SKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGAKP 361 (420)
Q Consensus 283 -~~d~e~~~~l~~ll~~~g~~v~~s~Di~g~e~~~alkNv~Ai~~G~~~gl~lg~N~~~al~~~~~~E~~~lA~a~Gi~~ 361 (420)
..+++..++++++|+..|..++..++.. .... ...|.. +.....+..++.|. +.++|+++
T Consensus 137 ~~~~~~~~~~~~~l~~~~G~~~~~~e~~~-d~~~--------a~~g~g-------pa~~~~~~eal~~a---~~~~Gl~~ 197 (247)
T 3gt0_A 137 EMVTEKDLEDVLNIFNSFGQTEIVSEKLM-DVVT--------SVSGSS-------PAYVYMIIEAMADA---AVLDGMPR 197 (247)
T ss_dssp TTCCHHHHHHHHHHHGGGEEEEECCGGGH-HHHH--------HHHHHH-------HHHHHHHHHHHHHH---HHHTTCCH
T ss_pred CCCCHHHHHHHHHHHHhCCCEEEeCHHHc-cHHH--------HHhccH-------HHHHHHHHHHHHHH---HHHcCCCH
Confidence 3578889999999999998555543321 1111 011111 11122223333332 78899999
Q ss_pred hhhhhcc-----ccchhhhhhcccCCCCccccccccCCCChHHHHHHc----CCcccccchhh
Q 014700 362 ATITGLS-----GTGDIMLTCFVNLSRNRTVGVRLGSGEKLDDILSSM----NQVLVNPSMQP 415 (420)
Q Consensus 362 ~t~~~l~-----g~gdl~~t~~~~~sRn~~~G~~l~~g~~~~~~~~~~----~~~~eG~~t~~ 415 (420)
+..+++. |...+. +..|+++++..++. +.+++|++..+
T Consensus 198 ~~a~~~~~~~~~gs~~~~----------------~~~~~~p~~l~~~v~spgG~t~~gl~~le 244 (247)
T 3gt0_A 198 NQAYKFAAQAVLGSAKMV----------------LETGIHPGELKDMVCSPGGTTIEAVATLE 244 (247)
T ss_dssp HHHHHHHHHHHHHHHHHH----------------HHSCC------------------------
T ss_pred HHHHHHHHHHHHHHHHHH----------------HHcCCCHHHHHHhcCCCCchHHHHHHHHH
Confidence 9888754 222222 22445555555544 56788877653
No 60
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=99.74 E-value=3.2e-18 Score=165.15 Aligned_cols=177 Identities=14% Similarity=0.159 Sum_probs=125.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCC--eEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhcc-CCcEE
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQL--KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL-GADYC 203 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~--~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~-~aDiV 203 (420)
||||+|||+|.||.++|..|.++| + +|++|+|+++..+.+.+.|.. ...+++++++++ ++|+|
T Consensus 1 m~~I~iIG~G~mG~~~a~~l~~~g--~~~~V~~~d~~~~~~~~~~~~g~~------------~~~~~~~~~~~~~~aDvV 66 (281)
T 2g5c_A 1 MQNVLIVGVGFMGGSFAKSLRRSG--FKGKIYGYDINPESISKAVDLGII------------DEGTTSIAKVEDFSPDFV 66 (281)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHTT--CCSEEEEECSCHHHHHHHHHTTSC------------SEEESCGGGGGGTCCSEE
T ss_pred CcEEEEEecCHHHHHHHHHHHhcC--CCcEEEEEeCCHHHHHHHHHCCCc------------ccccCCHHHHhcCCCCEE
Confidence 479999999999999999999988 7 899999999888887765421 123457778888 99999
Q ss_pred EEccChhhHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHH-HhCCCCCCeE--EEECcccHH-HHhhcCCeEE
Q 014700 204 LHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQ-ALRNPRQPFI--ALSGPSFAL-ELMNKLPTAM 279 (420)
Q Consensus 204 IlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~-~lg~~~~~~~--vl~GP~~a~-ev~~g~~t~i 279 (420)
|+|||.+.+.++++++.++++++++|++++++ .....+.+.+.+.+ .++. +++. ..+||.++. ++..+.++.+
T Consensus 67 ilavp~~~~~~v~~~l~~~l~~~~iv~~~~~~-~~~~~~~l~~~l~~~~v~~--~p~~~~~~~gp~~a~~~l~~g~~~~~ 143 (281)
T 2g5c_A 67 MLSSPVRTFREIAKKLSYILSEDATVTDQGSV-KGKLVYDLENILGKRFVGG--HPIAGTEKSGVEYSLDNLYEGKKVIL 143 (281)
T ss_dssp EECSCHHHHHHHHHHHHHHSCTTCEEEECCSC-CTHHHHHHHHHHGGGEECE--EEECCCSCCSGGGCCSSTTTTCEEEE
T ss_pred EEcCCHHHHHHHHHHHHhhCCCCcEEEECCCC-cHHHHHHHHHhccccceee--ccccCCccCChhhhhhHHhCCCCEEE
Confidence 99999999999999999989889888887653 33222333444433 1121 1111 123555543 2334444433
Q ss_pred EEe-cCCHHHHHHHHHHHhcCCceEEEcCChhHHHHHHHHHH
Q 014700 280 VVA-SKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKN 320 (420)
Q Consensus 280 ~ia-~~d~e~~~~l~~ll~~~g~~v~~s~Di~g~e~~~alkN 320 (420)
+.. +.+.+..+.++++|+..|++++..++..+..|.++.-|
T Consensus 144 ~~~~~~~~~~~~~v~~l~~~~g~~~~~~~~~~~d~~~~~~~~ 185 (281)
T 2g5c_A 144 TPTKKTDKKRLKLVKRVWEDVGGVVEYMSPELHDYVFGVVSH 185 (281)
T ss_dssp CCCSSSCHHHHHHHHHHHHHTTCEEEECCHHHHHHHHHHHTH
T ss_pred ecCCCCCHHHHHHHHHHHHHcCCEEEEcCHHHHHHHHHHHHH
Confidence 222 56788899999999999999888887766666655444
No 61
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=99.74 E-value=2e-16 Score=153.49 Aligned_cols=153 Identities=19% Similarity=0.246 Sum_probs=119.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCC---eEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEE
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQL---KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~---~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiV 203 (420)
+|||+|||+|+||.+++..|.++| + +|++|+|++++++.+.+.. ++..+++..++++++|+|
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g--~~~~~V~v~dr~~~~~~~l~~~~-------------gi~~~~~~~~~~~~aDvV 67 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANG--YDPNRICVTNRSLDKLDFFKEKC-------------GVHTTQDNRQGALNADVV 67 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTT--CCGGGEEEECSSSHHHHHHHHTT-------------CCEEESCHHHHHSSCSEE
T ss_pred CCEEEEEcccHHHHHHHHHHHHCC--CCCCeEEEEeCCHHHHHHHHHHc-------------CCEEeCChHHHHhcCCeE
Confidence 589999999999999999999998 7 9999999999988888741 245667888889999999
Q ss_pred EEccChhhHHHHHHHhhhc-CCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCeEEEECcccHHHHhhcCCeEEEEe
Q 014700 204 LHAMPVQFSSSFLEGISDY-VDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVA 282 (420)
Q Consensus 204 IlaVp~~~l~~vl~~i~~~-l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~~vl~GP~~a~ev~~g~~t~i~ia 282 (420)
|+|||++.++++++++.++ ++++++||++++|+..+ .+.+.++.. .. .+...|+.+..+..+. ..+..
T Consensus 68 ilav~p~~~~~vl~~l~~~~l~~~~iiiS~~agi~~~-------~l~~~l~~~-~~-vvr~mPn~p~~v~~g~--~~l~~ 136 (280)
T 3tri_A 68 VLAVKPHQIKMVCEELKDILSETKILVISLAVGVTTP-------LIEKWLGKA-SR-IVRAMPNTPSSVRAGA--TGLFA 136 (280)
T ss_dssp EECSCGGGHHHHHHHHHHHHHTTTCEEEECCTTCCHH-------HHHHHHTCC-SS-EEEEECCGGGGGTCEE--EEEEC
T ss_pred EEEeCHHHHHHHHHHHHhhccCCCeEEEEecCCCCHH-------HHHHHcCCC-Ce-EEEEecCChHHhcCcc--EEEEe
Confidence 9999999999999999998 88888999999998753 344555432 12 2445577765544332 22222
Q ss_pred c--CCHHHHHHHHHHHhcCCceEEE
Q 014700 283 S--KDRKLANAVQQLLASKHLRIST 305 (420)
Q Consensus 283 ~--~d~e~~~~l~~ll~~~g~~v~~ 305 (420)
+ .+++..+.++++|+..|..++.
T Consensus 137 ~~~~~~~~~~~v~~l~~~iG~~~~v 161 (280)
T 3tri_A 137 NETVDKDQKNLAESIMRAVGLVIWV 161 (280)
T ss_dssp CTTSCHHHHHHHHHHHGGGEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCeEEE
Confidence 2 3678899999999999976554
No 62
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=99.74 E-value=1.1e-16 Score=164.25 Aligned_cols=220 Identities=16% Similarity=0.159 Sum_probs=165.1
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCC-------CCCceEEeCCHHHhcc
Q 014700 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQK-------LPENVIATTDAKTALL 198 (420)
Q Consensus 126 ~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~-------l~~~i~a~td~~eal~ 198 (420)
.|.+|+|||+|.||..+|..|++.| |+|+.+|.++++++.|++ |..+.+.|+.. -..++++++|+++++.
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~G--~~V~g~Did~~kV~~ln~-G~~pi~Epgl~ell~~~~~~g~l~~tt~~~~ai~ 96 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALLG--HRVVGYDVNPSIVERLRA-GRPHIYEPGLEEALGRALSSGRLSFAESAEEAVA 96 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHT--CEEEEECSCHHHHHHHHT-TCCSSCCTTHHHHHHHHHHTTCEEECSSHHHHHH
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCC--CcEEEEECCHHHHHHHHC-CCCCCCCCCHHHHHHHHHHcCCeeEEcCHHHHHh
Confidence 4679999999999999999999999 999999999999999987 44455555532 1346889999999999
Q ss_pred CCcEEEEccCh----------hhHHHHHHHhhhcCC---CCCeEEEeccCCCcchhhhH-HHHHHHHhCCCCCCeEEEEC
Q 014700 199 GADYCLHAMPV----------QFSSSFLEGISDYVD---PGLPFISLSKGLELNTLRMM-SQIIPQALRNPRQPFIALSG 264 (420)
Q Consensus 199 ~aDiVIlaVp~----------~~l~~vl~~i~~~l~---~~~iVVs~snGi~~~t~~~~-se~l~~~lg~~~~~~~vl~G 264 (420)
++|++|+|||. .+++++++.|.++++ ++++||.-+ .+.+.+.+.+ ...+.+..+. ..+.+.+.
T Consensus 97 ~ad~~~I~VpTP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eS-TVppGtte~~~~~~l~~~~~~--~~f~v~~~ 173 (444)
T 3vtf_A 97 ATDATFIAVGTPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVVKS-TVPPGTTEGLVARAVAEEAGG--VKFSVASN 173 (444)
T ss_dssp TSSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEECS-CCCTTTTTTHHHHHHHTTTTT--CCCEEEEC
T ss_pred cCCceEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEEeC-CCCCchHHHHHHHHHHHhCCC--CCceeecC
Confidence 99999999984 257888888888774 466777655 3666665543 3444444333 46778889
Q ss_pred cccHHHHh----hcCCeEEEEecCCHHHHHHHHHHHhcCCceEEEcCChhHHHHHHHHHHHHHHHHHHHHhcccchhHHH
Q 014700 265 PSFALELM----NKLPTAMVVASKDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMA 340 (420)
Q Consensus 265 P~~a~ev~----~g~~t~i~ia~~d~e~~~~l~~ll~~~g~~v~~s~Di~g~e~~~alkNv~Ai~~G~~~gl~lg~N~~~ 340 (420)
|.+..+.. ...+..+++++.++...+.+.++++.....+.. .++..+|+.| +..|...
T Consensus 174 PErl~eG~a~~d~~~~~riViG~~~~~a~~~~~~ly~~~~~~~~~-~~~~~AE~~K-----------------l~eN~~r 235 (444)
T 3vtf_A 174 PEFLREGSALEDFFKPDRIVIGAGDERAASFLLDVYKAVDAPKLV-MKPREAELVK-----------------YASNVFL 235 (444)
T ss_dssp CCCCCTTSHHHHHHSCSCEEEEESSHHHHHHHHHHTTTSCSCEEE-ECHHHHHHHH-----------------HHHHHHH
T ss_pred cccccCCccccccccCCcEEEcCCCHHHHHHHHHHHhccCCCEEE-echhHHHHHH-----------------HHHHHHH
Confidence 98775421 123445677888888888899999876655443 4666666655 4567778
Q ss_pred HHHHHHHHHHHHHHHHcCCChhhhhhccc
Q 014700 341 ALVAQGCSEIRWLATKMGAKPATITGLSG 369 (420)
Q Consensus 341 al~~~~~~E~~~lA~a~Gi~~~t~~~l~g 369 (420)
++....++|+..+|+++|+|...+.+.+|
T Consensus 236 avnIa~~NEla~ice~~GiDv~eV~~a~~ 264 (444)
T 3vtf_A 236 ALKISFANEVGLLAKRLGVDTYRVFEAVG 264 (444)
T ss_dssp HHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHhc
Confidence 88889999999999999999888877554
No 63
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=99.73 E-value=6.5e-17 Score=151.23 Aligned_cols=170 Identities=14% Similarity=0.224 Sum_probs=126.7
Q ss_pred cCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEE-EeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEE
Q 014700 125 ERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYM-LMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (420)
Q Consensus 125 ~~~mkI~IIGaGamG~alA~~La~aG~~~~V~l-~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiV 203 (420)
+.||||+|||+|+||.++|..|+++| ++|++ |+|++++++.+.+... +....+..++++++|+|
T Consensus 21 m~mmkI~IIG~G~mG~~la~~l~~~g--~~V~~v~~r~~~~~~~l~~~~g-------------~~~~~~~~~~~~~aDvV 85 (220)
T 4huj_A 21 QSMTTYAIIGAGAIGSALAERFTAAQ--IPAIIANSRGPASLSSVTDRFG-------------ASVKAVELKDALQADVV 85 (220)
T ss_dssp GGSCCEEEEECHHHHHHHHHHHHHTT--CCEEEECTTCGGGGHHHHHHHT-------------TTEEECCHHHHTTSSEE
T ss_pred hcCCEEEEECCCHHHHHHHHHHHhCC--CEEEEEECCCHHHHHHHHHHhC-------------CCcccChHHHHhcCCEE
Confidence 44789999999999999999999998 89999 9999998888765421 11122334557899999
Q ss_pred EEccChhhHHHHHHHhhhcCCCCCeEEEeccCCC-----cc--hhhhHHHHHHHHhCCCCCCeEEEECcccHHHHhh---
Q 014700 204 LHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE-----LN--TLRMMSQIIPQALRNPRQPFIALSGPSFALELMN--- 273 (420)
Q Consensus 204 IlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~-----~~--t~~~~se~l~~~lg~~~~~~~vl~GP~~a~ev~~--- 273 (420)
|+|||.+.++++++++.+ + ++++||++++|++ .+ +.....+.+.+.++.. -.+..-|+....+..
T Consensus 86 ilavp~~~~~~v~~~l~~-~-~~~ivi~~~~g~~~~~~~~~~~~~~~~~~~l~~~l~~~---~vv~~~~~~~~~v~~~g~ 160 (220)
T 4huj_A 86 ILAVPYDSIADIVTQVSD-W-GGQIVVDASNAIDFPAFKPRDLGGRLSTEIVSELVPGA---KVVKAFNTLPAAVLAADP 160 (220)
T ss_dssp EEESCGGGHHHHHTTCSC-C-TTCEEEECCCCBCTTTCCBCCCTTCCHHHHHHHHSTTC---EEEEESCSSCHHHHTSCS
T ss_pred EEeCChHHHHHHHHHhhc-c-CCCEEEEcCCCCCcccccccccCCCcHHHHHHHHCCCC---CEEECCCCCCHHHhhhCc
Confidence 999999999999999887 5 5889999999985 11 1223566777776531 233444554444333
Q ss_pred ---cCCeEEEEecCCHHHHHHHHHHHhcCCceEEEcCChhHHHH
Q 014700 274 ---KLPTAMVVASKDRKLANAVQQLLASKHLRISTSSDVTGVEI 314 (420)
Q Consensus 274 ---g~~t~i~ia~~d~e~~~~l~~ll~~~g~~v~~s~Di~g~e~ 314 (420)
+.+..+++++.+++..+.++++|+..|++++..+++....|
T Consensus 161 ~~~~~~~~v~~~g~~~~~~~~v~~l~~~~G~~~~~~G~l~~a~~ 204 (220)
T 4huj_A 161 DKGTGSRVLFLSGNHSDANRQVAELISSLGFAPVDLGTLAASGP 204 (220)
T ss_dssp BCSSCEEEEEEEESCHHHHHHHHHHHHHTTCEEEECCSHHHHHH
T ss_pred ccCCCCeeEEEeCCCHHHHHHHHHHHHHhCCCeEeeCChhhcch
Confidence 12355677888899999999999999999999988765433
No 64
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=99.70 E-value=8.7e-16 Score=146.90 Aligned_cols=195 Identities=14% Similarity=0.108 Sum_probs=133.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCe-EEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEE
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLK-VYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~-V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIl 205 (420)
+|||+|||+|.||..+|..|+++| ++ |.+|+|+++.++.+.+.. ++..+++++++++++|+||+
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g--~~~v~~~~~~~~~~~~~~~~~-------------g~~~~~~~~~~~~~~Dvvi~ 74 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKG--FRIVQVYSRTEESARELAQKV-------------EAEYTTDLAEVNPYAKLYIV 74 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHT--CCEEEEECSSHHHHHHHHHHT-------------TCEEESCGGGSCSCCSEEEE
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCC--CeEEEEEeCCHHHHHHHHHHc-------------CCceeCCHHHHhcCCCEEEE
Confidence 479999999999999999999998 78 899999999888887641 23456688888889999999
Q ss_pred ccChhhHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCC--CCCeEEEECcccHHHHhhcCCeEEEEec
Q 014700 206 AMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNP--RQPFIALSGPSFALELMNKLPTAMVVAS 283 (420)
Q Consensus 206 aVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~--~~~~~vl~GP~~a~ev~~g~~t~i~ia~ 283 (420)
|+|...++++++++.+.++++++||++++|+..+. +.+.++.. .++...+.|+... ...+.+ +++.+
T Consensus 75 av~~~~~~~v~~~l~~~~~~~~ivv~~s~~~~~~~-------l~~~~~~~~~~~~~~~~~g~~~~--~~~~~~--~~v~~ 143 (266)
T 3d1l_A 75 SLKDSAFAELLQGIVEGKREEALMVHTAGSIPMNV-------WEGHVPHYGVFYPMQTFSKQREV--DFKEIP--FFIEA 143 (266)
T ss_dssp CCCHHHHHHHHHHHHTTCCTTCEEEECCTTSCGGG-------STTTCSSEEEEEECCCC---CCC--CCTTCC--EEEEE
T ss_pred ecCHHHHHHHHHHHHhhcCCCcEEEECCCCCchHH-------HHHHHHhccCcCCceecCCCchh--hcCCCe--EEEec
Confidence 99999999999999888889999999999987542 22332210 0011111222111 112222 34456
Q ss_pred CCHHHHHHHHHHHhcCCceEEEcCChh---HHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHcCCC
Q 014700 284 KDRKLANAVQQLLASKHLRISTSSDVT---GVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGAK 360 (420)
Q Consensus 284 ~d~e~~~~l~~ll~~~g~~v~~s~Di~---g~e~~~alkNv~Ai~~G~~~gl~lg~N~~~al~~~~~~E~~~lA~a~Gi~ 360 (420)
.+++..+.++++|+..|.+++..++.. ...+.+...| .. .....+.| .++++.|++
T Consensus 144 ~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~l~~~-----------------~~--~~~~~~~e--al~~~~Gl~ 202 (266)
T 3d1l_A 144 SSTEDAAFLKAIASTLSNRVYDADSEQRKSLHLAAVFTCN-----------------FT--NHMYALAA--ELLKKYNLP 202 (266)
T ss_dssp SSHHHHHHHHHHHHTTCSCEEECCHHHHHHHHHHHHHHHH-----------------HH--HHHHHHHH--HHHHHTTCC
T ss_pred CCHHHHHHHHHHHHhcCCcEEEeCHHHHHHHHHHHHHHHH-----------------HH--HHHHHHHH--HHHHHcCCC
Confidence 788889999999999998888776542 2223322222 11 11123334 366788999
Q ss_pred hhhhhhcc
Q 014700 361 PATITGLS 368 (420)
Q Consensus 361 ~~t~~~l~ 368 (420)
++.+..+.
T Consensus 203 ~~~~~~l~ 210 (266)
T 3d1l_A 203 FDVMLPLI 210 (266)
T ss_dssp GGGGHHHH
T ss_pred HHHHHHHH
Confidence 88876643
No 65
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=99.69 E-value=4.2e-16 Score=148.64 Aligned_cols=193 Identities=16% Similarity=0.225 Sum_probs=133.1
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEcc
Q 014700 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAM 207 (420)
Q Consensus 128 mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIlaV 207 (420)
|||+|||+|.||.++|..|+++|. ++|++|+|++++++.+.+.. ++..++++++++ ++|+||+||
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~-~~v~~~~r~~~~~~~~~~~~-------------g~~~~~~~~~~~-~~D~vi~~v 65 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGG-YRIYIANRGAEKRERLEKEL-------------GVETSATLPELH-SDDVLILAV 65 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCS-CEEEEECSSHHHHHHHHHHT-------------CCEEESSCCCCC-TTSEEEECS
T ss_pred CEEEEECchHHHHHHHHHHHHCCC-CeEEEECCCHHHHHHHHHhc-------------CCEEeCCHHHHh-cCCEEEEEe
Confidence 699999999999999999998863 69999999999888887641 134455666778 999999999
Q ss_pred ChhhHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCeEEEECcccHHHHhhcCCeEEEEecC--C
Q 014700 208 PVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVASK--D 285 (420)
Q Consensus 208 p~~~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~~vl~GP~~a~ev~~g~~t~i~ia~~--d 285 (420)
|+..++++++++.+ + +++||++++|+.++ .+.+.++.. ..+ +...|+.+.....+. ..+..+. +
T Consensus 66 ~~~~~~~v~~~l~~--~-~~ivv~~~~g~~~~-------~l~~~~~~~-~~~-v~~~~~~~~~~~~g~--~~i~~~~~~~ 131 (263)
T 1yqg_A 66 KPQDMEAACKNIRT--N-GALVLSVAAGLSVG-------TLSRYLGGT-RRI-VRVMPNTPGKIGLGV--SGMYAEAEVS 131 (263)
T ss_dssp CHHHHHHHHTTCCC--T-TCEEEECCTTCCHH-------HHHHHTTSC-CCE-EEEECCGGGGGTCEE--EEEECCTTSC
T ss_pred CchhHHHHHHHhcc--C-CCEEEEecCCCCHH-------HHHHHcCCC-CcE-EEEcCCHHHHHcCce--EEEEcCCCCC
Confidence 99889999988876 5 88999999998852 344444431 122 222466555443332 2233344 7
Q ss_pred HHHHHHHHHHHhcCCceEEEc-CChhHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHcCCChhhh
Q 014700 286 RKLANAVQQLLASKHLRISTS-SDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMGAKPATI 364 (420)
Q Consensus 286 ~e~~~~l~~ll~~~g~~v~~s-~Di~g~e~~~alkNv~Ai~~G~~~gl~lg~N~~~al~~~~~~E~~~lA~a~Gi~~~t~ 364 (420)
++..+.++++|+..|+.++.. +|. +..+.++. |. + +.....+.+++.|+ +++.|++++++
T Consensus 132 ~~~~~~~~~l~~~~g~~~~~~~~~~--------~~~~~al~-g~------~-~~~~~~~~~~l~e~---~~~~G~~~~~~ 192 (263)
T 1yqg_A 132 ETDRRIADRIMKSVGLTVWLDDEEK--------MHGITGIS-GS------G-PAYVFYLLDALQNA---AIRQGFDMAEA 192 (263)
T ss_dssp HHHHHHHHHHHHTTEEEEECSSTTH--------HHHHHHHT-TS------H-HHHHHHHHHHHHHH---HHHTTCCHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEeCChhh--------ccHHHHHH-cc------H-HHHHHHHHHHHHHH---HHHcCCCHHHH
Confidence 888999999999999887555 431 12222221 11 1 12233444555555 88899999888
Q ss_pred hhcc
Q 014700 365 TGLS 368 (420)
Q Consensus 365 ~~l~ 368 (420)
.++.
T Consensus 193 ~~~~ 196 (263)
T 1yqg_A 193 RALS 196 (263)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8754
No 66
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=99.68 E-value=2.2e-16 Score=152.98 Aligned_cols=221 Identities=16% Similarity=0.178 Sum_probs=140.5
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEE
Q 014700 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (420)
Q Consensus 126 ~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIl 205 (420)
.+|||+|||+|.||.++|..|+++|.+++|++|+|+++..+.+.+.|.. ...+++++++++++|+||+
T Consensus 5 ~~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~------------~~~~~~~~~~~~~aDvVil 72 (290)
T 3b1f_A 5 EEKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIV------------DEATADFKVFAALADVIIL 72 (290)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSC------------SEEESCTTTTGGGCSEEEE
T ss_pred ccceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCc------------ccccCCHHHhhcCCCEEEE
Confidence 3689999999999999999999984338999999999988887765421 0345577777889999999
Q ss_pred ccChhhHHHHHHHhhhc-CCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCeE---EE-----ECcccHH-HHhhcC
Q 014700 206 AMPVQFSSSFLEGISDY-VDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFI---AL-----SGPSFAL-ELMNKL 275 (420)
Q Consensus 206 aVp~~~l~~vl~~i~~~-l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~~---vl-----~GP~~a~-ev~~g~ 275 (420)
|||.+.++++++++.++ ++++++|++++++ .... .+.+.+.++.....+. .+ .||..+. ++..+.
T Consensus 73 avp~~~~~~v~~~l~~~~l~~~~ivi~~~~~-~~~~----~~~l~~~l~~~~~~~v~~~P~~g~~~~g~~~a~~~l~~g~ 147 (290)
T 3b1f_A 73 AVPIKKTIDFIKILADLDLKEDVIITDAGST-KYEI----VRAAEYYLKDKPVQFVGSHPMAGSHKSGAVAANVNLFENA 147 (290)
T ss_dssp CSCHHHHHHHHHHHHTSCCCTTCEEECCCSC-HHHH----HHHHHHHHTTSSCEEEEEEEC-----CCTTSCCTTTTTTS
T ss_pred cCCHHHHHHHHHHHHhcCCCCCCEEEECCCC-chHH----HHHHHHhccccCCEEEEeCCcCCCCcchHHHhhHHHhCCC
Confidence 99999999999999998 8889988877643 2211 1334444432001110 11 1444332 233444
Q ss_pred CeEEEEe-cCCHHHHHHHHHHHhcCCceEEEcCChhHHHH---HHHHHHHHHHHHH-HHHhcccchhHHHHHHHHHHHHH
Q 014700 276 PTAMVVA-SKDRKLANAVQQLLASKHLRISTSSDVTGVEI---AGALKNVLAIAAG-IVVGMNLGNNSMAALVAQGCSEI 350 (420)
Q Consensus 276 ~t~i~ia-~~d~e~~~~l~~ll~~~g~~v~~s~Di~g~e~---~~alkNv~Ai~~G-~~~gl~lg~N~~~al~~~~~~E~ 350 (420)
++.+... +.+++..+.++++|+..|+.++..++...... .+.+.++++.... ....+.+..+....+...+++++
T Consensus 148 ~~~~~~~~~~~~~~~~~v~~l~~~~G~~~~~~~~~~~d~~~a~~s~~~~~~a~~~~~~~~~~g~~~~~~~~la~~~~~~~ 227 (290)
T 3b1f_A 148 YYIFSPSCLTKPNTIPALQDLLSGLHARYVEIDAAEHDCVTSQISHFPHIIASSLMKQAGDFSESHEMTKHFAAGGFRDM 227 (290)
T ss_dssp EEEEEECTTCCTTHHHHHHHHTGGGCCEEEECCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHCTHHHHHCCHHHHHT
T ss_pred eEEEecCCCCCHHHHHHHHHHHHHcCCEEEEcCHHHHHHHHHHHhhHHHHHHHHHHHHHHhcccchhhHHhhccccHHhh
Confidence 3434333 35677889999999999999877665433322 2334444432211 11111222234456667777777
Q ss_pred HHHHHHcCCChhhhhh
Q 014700 351 RWLATKMGAKPATITG 366 (420)
Q Consensus 351 ~~lA~a~Gi~~~t~~~ 366 (420)
.+++ +.+|..+.+
T Consensus 228 ~rla---~~~p~~~~~ 240 (290)
T 3b1f_A 228 TRIA---ESEPGMWTS 240 (290)
T ss_dssp TGGG---GSCHHHHHH
T ss_pred hhhh---cCCHHHHHH
Confidence 7666 556655444
No 67
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=99.66 E-value=1.8e-15 Score=149.59 Aligned_cols=199 Identities=15% Similarity=0.144 Sum_probs=136.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhc-CC------CCCCCC----CCCCCceEEeCCHHH
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKH-CN------CRYFPE----QKLPENVIATTDAKT 195 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g-~~------~~~l~~----~~l~~~i~a~td~~e 195 (420)
++||+|||+|.||++||..|+++| ++|++||++++.++.+.+.- .+ ..++++ .....++..++|+++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G--~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~~e 83 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGG--FRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAE 83 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTT--CCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCHHH
Confidence 579999999999999999999999 99999999998877765320 00 001111 011235788899999
Q ss_pred hccCCcEEEEccChh--hHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCC--CCeEEEECcccHHHH
Q 014700 196 ALLGADYCLHAMPVQ--FSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPR--QPFIALSGPSFALEL 271 (420)
Q Consensus 196 al~~aDiVIlaVp~~--~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~--~~~~vl~GP~~a~ev 271 (420)
++++||+||+|||.. ..+.+++++.++++++++|++.+.|+... .+.+.++.+. ....++..| .
T Consensus 84 av~~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~i~~~-------~la~~~~~~~r~ig~Hp~~P~-~---- 151 (319)
T 2dpo_A 84 AVEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPS-------KLFTGLAHVKQCIVAHPVNPP-Y---- 151 (319)
T ss_dssp HTTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHH-------HHHTTCTTGGGEEEEEECSST-T----
T ss_pred HHhcCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCChHHH-------HHHHhcCCCCCeEEeecCCch-h----
Confidence 999999999999964 46788899999999999999888777643 2333333210 111222222 1
Q ss_pred hhcCCeEEEEec--CCHHHHHHHHHHHhcCCceEEEc-CChhHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHH
Q 014700 272 MNKLPTAMVVAS--KDRKLANAVQQLLASKHLRISTS-SDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCS 348 (420)
Q Consensus 272 ~~g~~t~i~ia~--~d~e~~~~l~~ll~~~g~~v~~s-~Di~g~e~~~alkNv~Ai~~G~~~gl~lg~N~~~al~~~~~~ 348 (420)
..+...++.+ .+++.++++.++++..|..+++. .|..|- +.|+. ....++
T Consensus 152 --~~~lveiv~g~~t~~e~~~~~~~l~~~lGk~~v~v~~~~~Gf---------------------i~Nrl----l~a~~~ 204 (319)
T 2dpo_A 152 --YIPLVELVPHPETSPATVDRTHALMRKIGQSPVRVLKEIDGF---------------------VLNRL----QYAIIS 204 (319)
T ss_dssp --TCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEECSSCCTTT---------------------THHHH----HHHHHH
T ss_pred --hcceEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEECCCcCCc---------------------hHHHH----HHHHHH
Confidence 1222233343 57899999999999999887776 454331 11222 123578
Q ss_pred HHHHHHHHcCCChhhhhh
Q 014700 349 EIRWLATKMGAKPATITG 366 (420)
Q Consensus 349 E~~~lA~a~Gi~~~t~~~ 366 (420)
|+..+++.-|++++.+..
T Consensus 205 EA~~l~~~g~~~~~~id~ 222 (319)
T 2dpo_A 205 EAWRLVEEGIVSPSDLDL 222 (319)
T ss_dssp HHHHHHHTTSSCHHHHHH
T ss_pred HHHHHHHhCCCCHHHHHH
Confidence 999999988889887765
No 68
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=99.66 E-value=3e-15 Score=142.60 Aligned_cols=151 Identities=15% Similarity=0.170 Sum_probs=110.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCC--CCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEE
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKS--QLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~--~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVI 204 (420)
+|||+|||+|+||++||..|+++|. .++|++|+|++++ . ++...++++++++++|+||
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~------~--------------g~~~~~~~~~~~~~~D~vi 63 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKKN------T--------------TLNYMSSNEELARHCDIIV 63 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCCS------S--------------SSEECSCHHHHHHHCSEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCccc------C--------------ceEEeCCHHHHHhcCCEEE
Confidence 5799999999999999999999871 1589999998753 1 2355667888888999999
Q ss_pred EccChhhHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCeEEEECcccHHHHhhcCCeEEEEec-
Q 014700 205 HAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVAS- 283 (420)
Q Consensus 205 laVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~~vl~GP~~a~ev~~g~~t~i~ia~- 283 (420)
+|||.+.++++++++.+.+ ++++||+.++|+.++ .+.+.++.. .. .+...|+++.....+ .+.++.+.
T Consensus 64 ~~v~~~~~~~v~~~l~~~l-~~~~vv~~~~gi~~~-------~l~~~~~~~-~~-~v~~~p~~p~~~~~g-~~~~~~~~~ 132 (262)
T 2rcy_A 64 CAVKPDIAGSVLNNIKPYL-SSKLLISICGGLNIG-------KLEEMVGSE-NK-IVWVMPNTPCLVGEG-SFIYCSNKN 132 (262)
T ss_dssp ECSCTTTHHHHHHHSGGGC-TTCEEEECCSSCCHH-------HHHHHHCTT-SE-EEEEECCGGGGGTCE-EEEEEECTT
T ss_pred EEeCHHHHHHHHHHHHHhc-CCCEEEEECCCCCHH-------HHHHHhCCC-Cc-EEEECCChHHHHcCC-eEEEEeCCC
Confidence 9999999999999999888 678899999999864 234444431 11 234556666554444 33222222
Q ss_pred CCHHHHHHHHHHHhcCCceEEEcCC
Q 014700 284 KDRKLANAVQQLLASKHLRISTSSD 308 (420)
Q Consensus 284 ~d~e~~~~l~~ll~~~g~~v~~s~D 308 (420)
.+++..+.++++|+..|..++..++
T Consensus 133 ~~~~~~~~~~~ll~~~G~~~~~~~~ 157 (262)
T 2rcy_A 133 VNSTDKKYVNDIFNSCGIIHEIKEK 157 (262)
T ss_dssp CCHHHHHHHHHHHHTSEEEEECCGG
T ss_pred CCHHHHHHHHHHHHhCCCEEEeCHH
Confidence 3688899999999999974333333
No 69
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=99.66 E-value=2.4e-15 Score=145.72 Aligned_cols=197 Identities=12% Similarity=0.121 Sum_probs=132.4
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEE
Q 014700 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (420)
Q Consensus 127 ~mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIl 205 (420)
+|||+|||+ |.||.++|..|.++| ++|++|+|+++..+.+.+.|. .. .++.++++++|+||+
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g--~~V~~~~r~~~~~~~~~~~g~--------------~~-~~~~~~~~~aDvVi~ 73 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSA--HHLAAIEIAPEGRDRLQGMGI--------------PL-TDGDGWIDEADVVVL 73 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSS--SEEEEECCSHHHHHHHHHTTC--------------CC-CCSSGGGGTCSEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC--CEEEEEECCHHHHHHHHhcCC--------------Cc-CCHHHHhcCCCEEEE
Confidence 479999999 999999999999998 899999999998888876431 11 145567889999999
Q ss_pred ccChhhHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCeEEE-ECcccHHH--------HhhcCC
Q 014700 206 AMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIAL-SGPSFALE--------LMNKLP 276 (420)
Q Consensus 206 aVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~~vl-~GP~~a~e--------v~~g~~ 276 (420)
|||.+.++++++++.+.++++++||++++|...+. +.+..+ ...++ ..|.++.+ ...+.+
T Consensus 74 av~~~~~~~v~~~l~~~l~~~~ivv~~s~~~~~~~-------l~~~~~----~~~~v~~~P~~~~~~~~~~~~~~~~g~l 142 (286)
T 3c24_A 74 ALPDNIIEKVAEDIVPRVRPGTIVLILDAAAPYAG-------VMPERA----DITYFIGHPCHPPLFNDETDPAARTDYH 142 (286)
T ss_dssp CSCHHHHHHHHHHHGGGSCTTCEEEESCSHHHHHT-------CSCCCT----TSEEEEEEECCSCSSCCCCSHHHHTCSS
T ss_pred cCCchHHHHHHHHHHHhCCCCCEEEECCCCchhHH-------HHhhhC----CCeEEecCCCCccccccccchhhccCcc
Confidence 99999999999999999999999999888763221 112111 12233 55555322 455532
Q ss_pred ------eEE-EEecCCHHHHHHHHHHHhcCCc---eEEEcCChhHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHH
Q 014700 277 ------TAM-VVASKDRKLANAVQQLLASKHL---RISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQG 346 (420)
Q Consensus 277 ------t~i-~ia~~d~e~~~~l~~ll~~~g~---~v~~s~Di~g~e~~~alkNv~Ai~~G~~~gl~lg~N~~~al~~~~ 346 (420)
..+ +..+.+++..+.++++|+..|. +++..+......+.+++.|. ........
T Consensus 143 ~~~~~~~~i~~~~~~~~~~~~~v~~l~~~~G~~~~~~~~v~~~~~~~~~~a~~n~-----------------~~~~~~~~ 205 (286)
T 3c24_A 143 GGIAKQAIVCALMQGPEEHYAIGADICETMWSPVTRTHRVTTEQLAILEPGLSEM-----------------VAMPFVET 205 (286)
T ss_dssp SSSSCEEEEEEEEESCTHHHHHHHHHHHHHTCSEEEEEECCHHHHHHHTTHHHHT-----------------THHHHHHH
T ss_pred cccccceeeeeccCCCHHHHHHHHHHHHHhcCCcceEEEeChhHhHHHHHHHHHH-----------------HHHHHHHH
Confidence 222 2235677889999999999998 67666533222221222211 11111223
Q ss_pred HHH-HHHHHHHcCCChhhhhhcc
Q 014700 347 CSE-IRWLATKMGAKPATITGLS 368 (420)
Q Consensus 347 ~~E-~~~lA~a~Gi~~~t~~~l~ 368 (420)
+.| +...+.++|++++.+.++.
T Consensus 206 ~~eal~~~~~~~Gl~~~~~~~~~ 228 (286)
T 3c24_A 206 MVHAVDECADRYGIDRQAALDFM 228 (286)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHH
Confidence 344 4445566799988877754
No 70
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=99.64 E-value=4.2e-14 Score=134.61 Aligned_cols=151 Identities=14% Similarity=0.219 Sum_probs=109.4
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHh-cCCCCCCCCCCCCCceEEeCCHHHhccCCcEEE
Q 014700 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK-HCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (420)
Q Consensus 126 ~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~-g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVI 204 (420)
++|||+|||+|.||.+++..|.+.| ++|.+|+|++++.+.+.+. + +..+++++++++++|+||
T Consensus 2 ~~m~i~iiG~G~mG~~~a~~l~~~g--~~v~~~~~~~~~~~~~~~~~g--------------~~~~~~~~~~~~~~D~Vi 65 (259)
T 2ahr_A 2 NAMKIGIIGVGKMASAIIKGLKQTP--HELIISGSSLERSKEIAEQLA--------------LPYAMSHQDLIDQVDLVI 65 (259)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTSS--CEEEEECSSHHHHHHHHHHHT--------------CCBCSSHHHHHHTCSEEE
T ss_pred CccEEEEECCCHHHHHHHHHHHhCC--CeEEEECCCHHHHHHHHHHcC--------------CEeeCCHHHHHhcCCEEE
Confidence 4689999999999999999999988 8999999999988888754 3 223457888888999999
Q ss_pred EccChhhHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCeEEEECcccHHHHhhcCCeEEEEecC
Q 014700 205 HAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVASK 284 (420)
Q Consensus 205 laVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~~vl~GP~~a~ev~~g~~t~i~ia~~ 284 (420)
+|+|.+.++++++++. ++++||++++|+..+. +.+.++.. ..+ +...|+++.....+ ...+..+.
T Consensus 66 ~~v~~~~~~~v~~~l~----~~~~vv~~~~~~~~~~-------l~~~~~~~-~~~-v~~~p~~~~~~~~g--~~~i~~~~ 130 (259)
T 2ahr_A 66 LGIKPQLFETVLKPLH----FKQPIISMAAGISLQR-------LATFVGQD-LPL-LRIMPNMNAQILQS--STALTGNA 130 (259)
T ss_dssp ECSCGGGHHHHHTTSC----CCSCEEECCTTCCHHH-------HHHHHCTT-SCE-EEEECCGGGGGTCE--EEEEEECT
T ss_pred EEeCcHhHHHHHHHhc----cCCEEEEeCCCCCHHH-------HHHhcCCC-CCE-EEEcCCchHHHcCc--eEEEEcCC
Confidence 9999888888887653 6789999988887542 33333321 122 22446655544444 22233343
Q ss_pred --CHHHHHHHHHHHhcCCceEEEcCC
Q 014700 285 --DRKLANAVQQLLASKHLRISTSSD 308 (420)
Q Consensus 285 --d~e~~~~l~~ll~~~g~~v~~s~D 308 (420)
+++..+.++++|+..| .++..++
T Consensus 131 ~~~~~~~~~~~~ll~~~G-~~~~~~~ 155 (259)
T 2ahr_A 131 LVSQELQARVRDLTDSFG-STFDISE 155 (259)
T ss_dssp TCCHHHHHHHHHHHHTTE-EEEECCG
T ss_pred CCCHHHHHHHHHHHHhCC-CEEEecH
Confidence 7888999999999998 4554443
No 71
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=99.63 E-value=6.5e-15 Score=145.21 Aligned_cols=171 Identities=13% Similarity=0.143 Sum_probs=120.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCC--eEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHH-hccCCcEE
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQL--KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKT-ALLGADYC 203 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~--~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~e-al~~aDiV 203 (420)
+|||+|||+|.||.++|..|.++| + +|++|+|+++.++.+.+.|.. ...++++++ ++++||+|
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G--~~~~V~~~dr~~~~~~~a~~~G~~------------~~~~~~~~~~~~~~aDvV 98 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSG--FKGKIYGYDINPESISKAVDLGII------------DEGTTSIAKVEDFSPDFV 98 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTT--CCSEEEEECSCHHHHHHHHHTTSC------------SEEESCTTGGGGGCCSEE
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCC--CCCEEEEEECCHHHHHHHHHCCCc------------chhcCCHHHHhhccCCEE
Confidence 589999999999999999999998 7 999999999988887775531 134567778 88999999
Q ss_pred EEccChhhHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCeEEEE-----CcccHH-HHhhcCCe
Q 014700 204 LHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALS-----GPSFAL-ELMNKLPT 277 (420)
Q Consensus 204 IlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~~vl~-----GP~~a~-ev~~g~~t 277 (420)
|+|||...+.++++++.++++++++|++++. +.....+.+.+.+.+. ..+...+. ||..+. +++.+..+
T Consensus 99 ilavp~~~~~~vl~~l~~~l~~~~iv~d~~S-vk~~~~~~~~~~l~~~----~v~~hPm~G~e~sG~~~A~~~Lf~g~~~ 173 (314)
T 3ggo_A 99 MLSSPVRTFREIAKKLSYILSEDATVTDQGS-VKGKLVYDLENILGKR----FVGGHPIAGTEKSGVEYSLDNLYEGKKV 173 (314)
T ss_dssp EECSCGGGHHHHHHHHHHHSCTTCEEEECCS-CCTHHHHHHHHHHGGG----EECEEECCCCCCCSGGGCCTTTTTTCEE
T ss_pred EEeCCHHHHHHHHHHHhhccCCCcEEEECCC-CcHHHHHHHHHhcCCC----EEecCcccCCcccchhhhhhhhhcCCEE
Confidence 9999999999999999999999999988753 3322222233333211 11112233 343333 23344443
Q ss_pred EEEEe-cCCHHHHHHHHHHHhcCCceEEEcCChhHHHHHH
Q 014700 278 AMVVA-SKDRKLANAVQQLLASKHLRISTSSDVTGVEIAG 316 (420)
Q Consensus 278 ~i~ia-~~d~e~~~~l~~ll~~~g~~v~~s~Di~g~e~~~ 316 (420)
.++.. +.+++.+++++++|+..|.+++..+.-..+...+
T Consensus 174 il~~~~~~~~~~~~~v~~l~~~~G~~v~~~~~~~hD~~~a 213 (314)
T 3ggo_A 174 ILTPTKKTDKKRLKLVKRVWEDVGGVVEYMSPELHDYVFG 213 (314)
T ss_dssp EECCCTTSCHHHHHHHHHHHHHTTCEEEECCHHHHHHHHH
T ss_pred EEEeCCCCCHHHHHHHHHHHHHcCCEEEEcCHHHHHHHHH
Confidence 33222 3578899999999999999887766544444433
No 72
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=99.60 E-value=2.8e-14 Score=138.31 Aligned_cols=200 Identities=16% Similarity=0.148 Sum_probs=132.8
Q ss_pred cCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHh-------------cCCCCCCCCCCCCCceEEeC
Q 014700 125 ERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK-------------HCNCRYFPEQKLPENVIATT 191 (420)
Q Consensus 125 ~~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~-------------g~~~~~l~~~~l~~~i~a~t 191 (420)
+.++||+|||+|.||+.+|..|+++| ++|++|||+++.++.+.+. +..... ......++..++
T Consensus 2 m~~~kV~VIGaG~mG~~iA~~la~~G--~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~--~~~~~~~i~~~~ 77 (283)
T 4e12_A 2 TGITNVTVLGTGVLGSQIAFQTAFHG--FAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGA--AQKALGGIRYSD 77 (283)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTH--HHHHHHHCEEES
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCC--CeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHH--HHHHHcCeEEeC
Confidence 45689999999999999999999998 9999999999887766543 110000 000112456788
Q ss_pred CHHHhccCCcEEEEccChh--hHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCeE-E-EECccc
Q 014700 192 DAKTALLGADYCLHAMPVQ--FSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFI-A-LSGPSF 267 (420)
Q Consensus 192 d~~eal~~aDiVIlaVp~~--~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~~-v-l~GP~~ 267 (420)
++++++++||+||+|||.. ....+++++.+++++++++++.+.++... . +.+.++.+ ..+. . ...|..
T Consensus 78 ~~~~~~~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~~~~~---~----la~~~~~~-~~~ig~h~~~p~~ 149 (283)
T 4e12_A 78 DLAQAVKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSSTLLPS---D----LVGYTGRG-DKFLALHFANHVW 149 (283)
T ss_dssp CHHHHTTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHH---H----HHHHHSCG-GGEEEEEECSSTT
T ss_pred CHHHHhccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCCCCHH---H----HHhhcCCC-cceEEEccCCCcc
Confidence 9988899999999999986 78888999999999999999888777542 1 22333321 1111 1 112321
Q ss_pred HHHHhhcCCeEEEEe-cCCHHHHHHHHHHHhcCCceEEEc-CChhHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHH
Q 014700 268 ALELMNKLPTAMVVA-SKDRKLANAVQQLLASKHLRISTS-SDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQ 345 (420)
Q Consensus 268 a~ev~~g~~t~i~ia-~~d~e~~~~l~~ll~~~g~~v~~s-~Di~g~e~~~alkNv~Ai~~G~~~gl~lg~N~~~al~~~ 345 (420)
......++.+ ..+++..+.+.++++..|...+.. .|..|- +. ++ +...
T Consensus 150 -----~~~lvevv~~~~t~~~~~~~~~~l~~~~g~~~v~v~~~~~g~-----i~----------------nr----~~~~ 199 (283)
T 4e12_A 150 -----VNNTAEVMGTTKTDPEVYQQVVEFASAIGMVPIELKKEKAGY-----VL----------------NS----LLVP 199 (283)
T ss_dssp -----TSCEEEEEECTTSCHHHHHHHHHHHHHTTCEEEECSSCCTTT-----TH----------------HH----HHHH
T ss_pred -----cCceEEEEeCCCCCHHHHHHHHHHHHHcCCEEEEEecCCCCE-----Ee----------------hH----HHHH
Confidence 1222222222 236889999999999999887765 454321 11 11 1123
Q ss_pred HHHHHHHHHHHcCCChhhhhh
Q 014700 346 GCSEIRWLATKMGAKPATITG 366 (420)
Q Consensus 346 ~~~E~~~lA~a~Gi~~~t~~~ 366 (420)
.++|+..+++..+++++.+..
T Consensus 200 ~~~ea~~l~~~g~~~~~~id~ 220 (283)
T 4e12_A 200 LLDAAAELLVDGIADPETIDK 220 (283)
T ss_dssp HHHHHHHHHHTTSCCHHHHHH
T ss_pred HHHHHHHHHHhCCCCHHHHHH
Confidence 567888888777778777655
No 73
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=99.60 E-value=4.5e-14 Score=130.22 Aligned_cols=179 Identities=14% Similarity=0.175 Sum_probs=126.0
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHh-cCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEE
Q 014700 128 NKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK-HCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (420)
Q Consensus 128 mkI~IIG-aGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~-g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIl 205 (420)
|||+||| +|.||.+++..|+++| ++|++|+|++++.+.+.+. +. +++ +..+. .++++++++++|+||+
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g--~~V~~~~r~~~~~~~~~~~~~~---~~~----~~~~~-~~~~~~~~~~~D~Vi~ 70 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLG--HEIVVGSRREEKAEAKAAEYRR---IAG----DASIT-GMKNEDAAEACDIAVL 70 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT--CEEEEEESSHHHHHHHHHHHHH---HHS----SCCEE-EEEHHHHHHHCSEEEE
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHhcc---ccc----cCCCC-hhhHHHHHhcCCEEEE
Confidence 6999999 9999999999999998 8999999999888777653 21 111 01233 2467777889999999
Q ss_pred ccChhhHHHHHHHhhhcCCCCCeEEEeccCCCcchh-------hhHHHHHHHHhCCCCCCeEEEEC--cccHHHHhh--c
Q 014700 206 AMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTL-------RMMSQIIPQALRNPRQPFIALSG--PSFALELMN--K 274 (420)
Q Consensus 206 aVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~-------~~~se~l~~~lg~~~~~~~vl~G--P~~a~ev~~--g 274 (420)
|+|...++++++++.+.++ +++++++++|+..++. ....+.+.+.++. .. ++.+ |..+..... .
T Consensus 71 ~~~~~~~~~~~~~l~~~~~-~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~~~~~--~~--~v~~~~~~~~~~~~~~~~ 145 (212)
T 1jay_A 71 TIPWEHAIDTARDLKNILR-EKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLES--EK--VVSALHTIPAARFANLDE 145 (212)
T ss_dssp CSCHHHHHHHHHHTHHHHT-TSEEEECCCCEECCTTCCEECCSSCHHHHHHHHHTC--SC--EEECCTTCCHHHHHCTTC
T ss_pred eCChhhHHHHHHHHHHHcC-CCEEEEcCCCcCcCCceeecCCCCcHHHHHHHhCCC--Ce--EEEEccchHHHHhhCcCC
Confidence 9999999999999887774 8999999999874310 1123445555543 12 3344 444443322 2
Q ss_pred CC-eEEEEecCCHHHHHHHHHHHhcC-CceEEEcCChhHHHHHHHHHHH
Q 014700 275 LP-TAMVVASKDRKLANAVQQLLASK-HLRISTSSDVTGVEIAGALKNV 321 (420)
Q Consensus 275 ~~-t~i~ia~~d~e~~~~l~~ll~~~-g~~v~~s~Di~g~e~~~alkNv 321 (420)
.. ..+++++.+++..+.++++|+.. |..+...+++....|.|.+.|.
T Consensus 146 ~~~~~~~~~g~~~~~~~~v~~l~~~~~G~~~~~~~~~~~a~~~k~~~~~ 194 (212)
T 1jay_A 146 KFDWDVPVCGDDDESKKVVMSLISEIDGLRPLDAGPLSNSRLVESLTPL 194 (212)
T ss_dssp CCCEEEEEEESCHHHHHHHHHHHHHSTTEEEEEEESGGGHHHHHTHHHH
T ss_pred CCCccEEEECCcHHHHHHHHHHHHHcCCCCceeccchhHHHHhcchHHH
Confidence 22 22334455688899999999999 9988777787666666655543
No 74
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=99.60 E-value=7e-14 Score=136.47 Aligned_cols=195 Identities=16% Similarity=0.213 Sum_probs=129.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHH-----------hcCCCCCCCC--------CCCCCce
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE-----------KHCNCRYFPE--------QKLPENV 187 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~-----------~g~~~~~l~~--------~~l~~~i 187 (420)
++||+|||+|.||++||..|+++| ++|++|||+++.++...+ .|. +.. .....++
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G--~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~----~~~~~~~~~~~~~~~~~i 88 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATG--HTVVLVDQTEDILAKSKKGIEESLRKVAKKKF----AENPKAGDEFVEKTLSTI 88 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHHHHHHHHHHHHHTTS----SSCHHHHHHHHHHHHHTE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHHHHHHHHcCC----CCccccchhhHHHHHhce
Confidence 578999999999999999999998 999999999987765432 111 000 0011246
Q ss_pred EEeCCHHHhccCCcEEEEccChhh--HHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCeE--EEE
Q 014700 188 IATTDAKTALLGADYCLHAMPVQF--SSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFI--ALS 263 (420)
Q Consensus 188 ~a~td~~eal~~aDiVIlaVp~~~--l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~~--vl~ 263 (420)
.+++|+++++++||+||+|||... .+++++++.++++++++|++.++|+... .+.+.++.+ ..+. -..
T Consensus 89 ~~~~~~~~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~ts~i~~~-------~l~~~~~~~-~~~~g~h~~ 160 (302)
T 1f0y_A 89 ATSTDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSLQIT-------SIANATTRQ-DRFAGLHFF 160 (302)
T ss_dssp EEESCHHHHTTSCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCSSSCHH-------HHHTTSSCG-GGEEEEEEC
T ss_pred EEecCHHHhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCCCCHH-------HHHHhcCCc-ccEEEEecC
Confidence 778899888999999999999754 6788899998898899999888888753 233333221 0111 111
Q ss_pred CcccHHHHhhcCCeEEEEec--CCHHHHHHHHHHHhcCCceEEEcCChhHHHHHHHHHHHHHHHHHHHHhcccchhHHHH
Q 014700 264 GPSFALELMNKLPTAMVVAS--KDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAA 341 (420)
Q Consensus 264 GP~~a~ev~~g~~t~i~ia~--~d~e~~~~l~~ll~~~g~~v~~s~Di~g~e~~~alkNv~Ai~~G~~~gl~lg~N~~~a 341 (420)
.|.. ..+...++.+ .+++..+.+.++++..|..++...|..+ . +.++.
T Consensus 161 ~P~~------~~~~~~i~~g~~~~~e~~~~~~~l~~~~G~~~v~~~~~~g----~-----------------i~nr~--- 210 (302)
T 1f0y_A 161 NPVP------VMKLVEVIKTPMTSQKTFESLVDFSKALGKHPVSCKDTPG----F-----------------IVNRL--- 210 (302)
T ss_dssp SSTT------TCCEEEEECCTTCCHHHHHHHHHHHHHTTCEEEEECSCTT----T-----------------THHHH---
T ss_pred CCcc------cCceEEEeCCCCCCHHHHHHHHHHHHHcCCceEEecCccc----c-----------------cHHHH---
Confidence 2321 1122223333 3789999999999999987776655432 1 11111
Q ss_pred HHHHHHHHHHHHHHHcCCChhhhhh
Q 014700 342 LVAQGCSEIRWLATKMGAKPATITG 366 (420)
Q Consensus 342 l~~~~~~E~~~lA~a~Gi~~~t~~~ 366 (420)
+...++|+.++++..|++++.+..
T Consensus 211 -l~~~~~Ea~~l~~~g~~~~~~id~ 234 (302)
T 1f0y_A 211 -LVPYLMEAIRLYERGDASKEDIDT 234 (302)
T ss_dssp -HHHHHHHHHHHHHTTSSCHHHHHH
T ss_pred -HHHHHHHHHHHHHcCCCCHHHHHH
Confidence 123467788888777777666543
No 75
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=99.58 E-value=4.4e-14 Score=137.95 Aligned_cols=204 Identities=12% Similarity=0.134 Sum_probs=130.5
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEE
Q 014700 127 TNKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (420)
Q Consensus 127 ~mkI~IIG-aGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIl 205 (420)
++||+||| +|.||.++|..|+++| ++|++|+|+++. ++++++++||+||+
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G--~~V~~~~~~~~~---------------------------~~~~~~~~aDvVil 71 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASG--YPISILDREDWA---------------------------VAESILANADVVIV 71 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTT--CCEEEECTTCGG---------------------------GHHHHHTTCSEEEE
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCC--CeEEEEECCccc---------------------------CHHHHhcCCCEEEE
Confidence 56999999 9999999999999998 899999987641 35567889999999
Q ss_pred ccChhhHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCeEEEECcccHHHHhhcCCeEEEEecCC
Q 014700 206 AMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVASKD 285 (420)
Q Consensus 206 aVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~~vl~GP~~a~ev~~g~~t~i~ia~~d 285 (420)
|||.+.+.++++++.++++++++|++++ |+.... .+.+.+.++....+...+.||.. +...+.++.++. +.+
T Consensus 72 avp~~~~~~vl~~l~~~l~~~~iv~~~~-svk~~~----~~~~~~~~~~~~v~~hP~~g~~~--~~~~g~~~~l~~-~~~ 143 (298)
T 2pv7_A 72 SVPINLTLETIERLKPYLTENMLLADLT-SVKREP----LAKMLEVHTGAVLGLHPMFGADI--ASMAKQVVVRCD-GRF 143 (298)
T ss_dssp CSCGGGHHHHHHHHGGGCCTTSEEEECC-SCCHHH----HHHHHHHCSSEEEEEEECSCTTC--SCCTTCEEEEEE-EEC
T ss_pred eCCHHHHHHHHHHHHhhcCCCcEEEECC-CCCcHH----HHHHHHhcCCCEEeeCCCCCCCc--hhhcCCeEEEec-CCC
Confidence 9999999999999999998888877764 444321 22233333311111112344443 122344333322 336
Q ss_pred HHHHHHHHHHHhcCCceEEEcCChhHHHHHHHHHH---HHHHHHHH-HHhcccchhHHHHHHHHHHHHHHH-HHHHcCCC
Q 014700 286 RKLANAVQQLLASKHLRISTSSDVTGVEIAGALKN---VLAIAAGI-VVGMNLGNNSMAALVAQGCSEIRW-LATKMGAK 360 (420)
Q Consensus 286 ~e~~~~l~~ll~~~g~~v~~s~Di~g~e~~~alkN---v~Ai~~G~-~~gl~lg~N~~~al~~~~~~E~~~-lA~a~Gi~ 360 (420)
.+..+.++++|+..|.+++..++...+.+.+..-+ +++...+. .....+.......+...+++.... +++..+.+
T Consensus 144 ~~~~~~v~~l~~~~G~~~~~~~~~~~d~~~a~~~~~p~~~a~~l~~~l~~~g~~~~~~~~la~~~f~~~~~~~~ria~~~ 223 (298)
T 2pv7_A 144 PERYEWLLEQIQIWGAKIYQTNATEHDHNMTYIQALRHFSTFANGLHLSKQPINLANLLALSSPIYRLELAMIGRLFAQD 223 (298)
T ss_dssp GGGTHHHHHHHHHTTCEEEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSCCHHHHHHTCCHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHcCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhcCHHHHHHHHHHHHHhcCC
Confidence 77789999999999999887776555666544444 33333221 112222233444566677777333 33333677
Q ss_pred hhhhhhc
Q 014700 361 PATITGL 367 (420)
Q Consensus 361 ~~t~~~l 367 (420)
|+...+.
T Consensus 224 p~~~~di 230 (298)
T 2pv7_A 224 AELYADI 230 (298)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7665553
No 76
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=99.57 E-value=3.9e-14 Score=131.94 Aligned_cols=165 Identities=16% Similarity=0.169 Sum_probs=116.8
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEE
Q 014700 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (420)
Q Consensus 126 ~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIl 205 (420)
.+|||+|||+|.||.+++..|+++| ++|++|+|+++..+.+.+.+ +... +.+++++++|+||+
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g--~~V~~~~r~~~~~~~~~~~g--------------~~~~-~~~~~~~~~DvVi~ 89 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSG--FKVVVGSRNPKRTARLFPSA--------------AQVT-FQEEAVSSPEVIFV 89 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTT--CCEEEEESSHHHHHHHSBTT--------------SEEE-EHHHHTTSCSEEEE
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHcC--------------Ccee-cHHHHHhCCCEEEE
Confidence 3689999999999999999999998 89999999998777665432 2333 67788899999999
Q ss_pred ccChhhHHHHHHHhhhcCCCCCeEEEeccCCCcchh---hhHHHHHHHHhCCCCCCeEEEECcccHHHHhhc---CCeEE
Q 014700 206 AMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTL---RMMSQIIPQALRNPRQPFIALSGPSFALELMNK---LPTAM 279 (420)
Q Consensus 206 aVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~---~~~se~l~~~lg~~~~~~~vl~GP~~a~ev~~g---~~t~i 279 (420)
|+|.+.++++++ +.+.+ ++++||++++|+..++. ....+.+.+.++.. .+.....+..+.....+ ..+.+
T Consensus 90 av~~~~~~~v~~-l~~~~-~~~~vv~~s~g~~~~~l~~~~~~~~~l~~~l~~~--~vv~~~n~~~~~~~~~~~~~g~~~~ 165 (215)
T 2vns_A 90 AVFREHYSSLCS-LSDQL-AGKILVDVSNPTEQEHLQHRESNAEYLASLFPTC--TVVKAFNVISAWTLQAGPRDGNRQV 165 (215)
T ss_dssp CSCGGGSGGGGG-GHHHH-TTCEEEECCCCCHHHHHHCSSCHHHHHHHHCTTS--EEEEECTTBCHHHHHTCSCSSCCEE
T ss_pred CCChHHHHHHHH-HHHhc-CCCEEEEeCCCcccccccccccHHHHHHHHCCCC--eEEeccccccHhHhcccccCCceeE
Confidence 999887777765 66666 78999999999875432 13345666666531 11111112122111111 12345
Q ss_pred EEecCCHHHHHHHHHHHhcCCceEEEcCChhH
Q 014700 280 VVASKDRKLANAVQQLLASKHLRISTSSDVTG 311 (420)
Q Consensus 280 ~ia~~d~e~~~~l~~ll~~~g~~v~~s~Di~g 311 (420)
++++.+++..+.++++|+..|++++..+++..
T Consensus 166 ~~~g~~~~~~~~v~~ll~~~G~~~~~~g~~~~ 197 (215)
T 2vns_A 166 PICGDQPEAKRAVSEMALAMGFMPVDMGSLAS 197 (215)
T ss_dssp EEEESCHHHHHHHHHHHHHTTCEEEECCSGGG
T ss_pred EEecCCHHHHHHHHHHHHHcCCceEeecchhh
Confidence 66777889999999999999999999888643
No 77
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=99.56 E-value=1e-14 Score=145.42 Aligned_cols=180 Identities=15% Similarity=0.164 Sum_probs=119.3
Q ss_pred cCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhcc----CC
Q 014700 125 ERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL----GA 200 (420)
Q Consensus 125 ~~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~----~a 200 (420)
+..+||+|||+|.||.+||..|.++| ++|++|+|+++.++.+.+.|. ..+++++++++ ++
T Consensus 6 ~~~~kIgIIG~G~mG~slA~~L~~~G--~~V~~~dr~~~~~~~a~~~G~--------------~~~~~~~e~~~~a~~~a 69 (341)
T 3ktd_A 6 DISRPVCILGLGLIGGSLLRDLHAAN--HSVFGYNRSRSGAKSAVDEGF--------------DVSADLEATLQRAAAED 69 (341)
T ss_dssp CCSSCEEEECCSHHHHHHHHHHHHTT--CCEEEECSCHHHHHHHHHTTC--------------CEESCHHHHHHHHHHTT
T ss_pred CCCCEEEEEeecHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHcCC--------------eeeCCHHHHHHhcccCC
Confidence 34689999999999999999999998 999999999998888776542 33457777655 47
Q ss_pred cEEEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhC-CCCCCeEEEECc-----ccHH-HHhh
Q 014700 201 DYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALR-NPRQPFIALSGP-----SFAL-ELMN 273 (420)
Q Consensus 201 DiVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg-~~~~~~~vl~GP-----~~a~-ev~~ 273 (420)
|+||+|||...+.++++++.++ +++++|++++ ++... +.+.+.+.+. ....+...+.|+ ..+. +++.
T Consensus 70 DlVilavP~~~~~~vl~~l~~~-~~~~iv~Dv~-Svk~~----i~~~~~~~~~~~~~v~~HPmaG~e~sG~~aa~~~Lf~ 143 (341)
T 3ktd_A 70 ALIVLAVPMTAIDSLLDAVHTH-APNNGFTDVV-SVKTA----VYDAVKARNMQHRYVGSHPMAGTANSGWSASMDGLFK 143 (341)
T ss_dssp CEEEECSCHHHHHHHHHHHHHH-CTTCCEEECC-SCSHH----HHHHHHHTTCGGGEECEEECCSCC-CCGGGCCSSTTT
T ss_pred CEEEEeCCHHHHHHHHHHHHcc-CCCCEEEEcC-CCChH----HHHHHHHhCCCCcEecCCccccccccchhhhhhHHhc
Confidence 9999999999999999999886 7888887765 33322 1223333221 101111223333 2222 2444
Q ss_pred cCCeEEEEec-CCHH--------HHHHHHHHHhcCCceEEEcCChhHHHHH---HHHHHHHHHHH
Q 014700 274 KLPTAMVVAS-KDRK--------LANAVQQLLASKHLRISTSSDVTGVEIA---GALKNVLAIAA 326 (420)
Q Consensus 274 g~~t~i~ia~-~d~e--------~~~~l~~ll~~~g~~v~~s~Di~g~e~~---~alkNv~Ai~~ 326 (420)
+.++.++... .+++ .++++.++|+..|.+++..+.-..+... +.+.++++.+.
T Consensus 144 g~~~iltp~~~~~~e~~~~~~~~~~~~v~~l~~~~Ga~v~~~~~~~HD~~~A~vshlPh~ia~aL 208 (341)
T 3ktd_A 144 RAVWVVTFDQLFDGTDINSTWISIWKDVVQMALAVGAEVVPSRVGPHDAAAARVSHLTHILAETL 208 (341)
T ss_dssp TCEEEECCGGGTSSCCCCHHHHHHHHHHHHHHHHTTCEEEECCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred CCeEEEEeCCCCChhhhccchHHHHHHHHHHHHHcCCEEEEeCHHHHHHHHHHHhHHHHHHHHHH
Confidence 5544333222 2445 7899999999999888776654444443 33455554443
No 78
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=99.56 E-value=8.4e-14 Score=135.98 Aligned_cols=187 Identities=19% Similarity=0.262 Sum_probs=124.4
Q ss_pred cCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEE
Q 014700 125 ERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (420)
Q Consensus 125 ~~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVI 204 (420)
.+.+||+|||+|.||..||..|+ +| ++|++|||+++.+++..+. + .+ ....+++.++++++ +++||+||
T Consensus 10 ~~~~~V~vIG~G~MG~~iA~~la-aG--~~V~v~d~~~~~~~~~~~~-l-----~~-~~~~~i~~~~~~~~-~~~aDlVi 78 (293)
T 1zej_A 10 HHHMKVFVIGAGLMGRGIAIAIA-SK--HEVVLQDVSEKALEAAREQ-I-----PE-ELLSKIEFTTTLEK-VKDCDIVM 78 (293)
T ss_dssp --CCEEEEECCSHHHHHHHHHHH-TT--SEEEEECSCHHHHHHHHHH-S-----CG-GGGGGEEEESSCTT-GGGCSEEE
T ss_pred cCCCeEEEEeeCHHHHHHHHHHH-cC--CEEEEEECCHHHHHHHHHH-H-----HH-HHhCCeEEeCCHHH-HcCCCEEE
Confidence 45789999999999999999999 98 9999999999988887765 1 00 01124677788876 78999999
Q ss_pred EccChhh--HHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCC--CCeEEEECcccHHHHhhcCCeEEE
Q 014700 205 HAMPVQF--SSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPR--QPFIALSGPSFALELMNKLPTAMV 280 (420)
Q Consensus 205 laVp~~~--l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~--~~~~vl~GP~~a~ev~~g~~t~i~ 280 (420)
.|+|... .+.++.++.+. +++++++.+.++.+. .+.+.+..+. ....++. |.. ..+...+
T Consensus 79 eavpe~~~vk~~l~~~l~~~--~~~IlasntSti~~~-------~~a~~~~~~~r~~G~Hf~~-Pv~------~~~lvei 142 (293)
T 1zej_A 79 EAVFEDLNTKVEVLREVERL--TNAPLCSNTSVISVD-------DIAERLDSPSRFLGVHWMN-PPH------VMPLVEI 142 (293)
T ss_dssp ECCCSCHHHHHHHHHHHHTT--CCSCEEECCSSSCHH-------HHHTTSSCGGGEEEEEECS-STT------TCCEEEE
T ss_pred EcCcCCHHHHHHHHHHHhcC--CCCEEEEECCCcCHH-------HHHHHhhcccceEeEEecC-ccc------cCCEEEE
Confidence 9999654 45555777665 788887655566653 1223222110 1112222 432 2233334
Q ss_pred Eec--CCHHHHHHHHHHHhcCCceEEEcCChhHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHcC
Q 014700 281 VAS--KDRKLANAVQQLLASKHLRISTSSDVTGVEIAGALKNVLAIAAGIVVGMNLGNNSMAALVAQGCSEIRWLATKMG 358 (420)
Q Consensus 281 ia~--~d~e~~~~l~~ll~~~g~~v~~s~Di~g~e~~~alkNv~Ai~~G~~~gl~lg~N~~~al~~~~~~E~~~lA~a~G 358 (420)
+.+ .+++.++++.++++..|..+++..|. .+..++ +...++|+..+++. |
T Consensus 143 v~g~~t~~~~~~~~~~l~~~lGk~~v~v~d~------fi~Nrl---------------------l~~~~~EA~~l~~~-G 194 (293)
T 1zej_A 143 VISRFTDSKTVAFVEGFLRELGKEVVVCKGQ------SLVNRF---------------------NAAVLSEASRMIEE-G 194 (293)
T ss_dssp EECTTCCHHHHHHHHHHHHHTTCEEEEEESS------CHHHHH---------------------HHHHHHHHHHHHHH-T
T ss_pred ECCCCCCHHHHHHHHHHHHHcCCeEEEeccc------ccHHHH---------------------HHHHHHHHHHHHHh-C
Confidence 444 48899999999999999888777664 222222 11357777777777 7
Q ss_pred CChhhhhh
Q 014700 359 AKPATITG 366 (420)
Q Consensus 359 i~~~t~~~ 366 (420)
++++.+..
T Consensus 195 v~~e~id~ 202 (293)
T 1zej_A 195 VRAEDVDR 202 (293)
T ss_dssp CCHHHHHH
T ss_pred CCHHHHHH
Confidence 77766655
No 79
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=99.55 E-value=2.9e-13 Score=139.60 Aligned_cols=164 Identities=17% Similarity=0.290 Sum_probs=113.7
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHH--------HHHHhcCCCCCCCC---CCCCCceEEeCCHH
Q 014700 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQ--------SINEKHCNCRYFPE---QKLPENVIATTDAK 194 (420)
Q Consensus 126 ~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~--------~i~~~g~~~~~l~~---~~l~~~i~a~td~~ 194 (420)
.++||+|||+|.||+.||..|+++| ++|++||+++++.. .+.+.|. +.. ..+..++..++|++
T Consensus 53 ~i~kVaVIGaG~MG~~IA~~la~aG--~~V~l~D~~~e~a~~~i~~~l~~~~~~G~----l~~~~~~~~~~~i~~t~dl~ 126 (460)
T 3k6j_A 53 DVNSVAIIGGGTMGKAMAICFGLAG--IETFLVVRNEQRCKQELEVMYAREKSFKR----LNDKRIEKINANLKITSDFH 126 (460)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHHHHHHHHHHTTS----CCHHHHHHHHTTEEEESCGG
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCC--CeEEEEECcHHHHHHHHHHHHHHHHHcCC----CCHHHHHHHhcceEEeCCHH
Confidence 4689999999999999999999999 99999999988432 2222221 100 01234677888885
Q ss_pred HhccCCcEEEEccChh--hHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCe---EEEECcccHH
Q 014700 195 TALLGADYCLHAMPVQ--FSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPF---IALSGPSFAL 269 (420)
Q Consensus 195 eal~~aDiVIlaVp~~--~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~---~vl~GP~~a~ 269 (420)
++++||+||.|||.. ..+.+++++.++++++++|++.+.++... .+.+.+..+ ..+ .++. |..
T Consensus 127 -al~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~aIlasnTSsl~i~-------~ia~~~~~p-~r~iG~Hffn-Pv~-- 194 (460)
T 3k6j_A 127 -KLSNCDLIVESVIEDMKLKKELFANLENICKSTCIFGTNTSSLDLN-------EISSVLRDP-SNLVGIHFFN-PAN-- 194 (460)
T ss_dssp -GCTTCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHH-------HHHTTSSSG-GGEEEEECCS-STT--
T ss_pred -HHccCCEEEEcCCCCHHHHHHHHHHHHhhCCCCCEEEecCCChhHH-------HHHHhccCC-cceEEEEecc-hhh--
Confidence 689999999999964 46778899999999999998887776643 233333321 111 1222 322
Q ss_pred HHhhcCCeEEEEec--CCHHHHHHHHHHHhcCCceEEEcCChhH
Q 014700 270 ELMNKLPTAMVVAS--KDRKLANAVQQLLASKHLRISTSSDVTG 311 (420)
Q Consensus 270 ev~~g~~t~i~ia~--~d~e~~~~l~~ll~~~g~~v~~s~Di~g 311 (420)
..+..-++.+ .+++.++++.++++..|..++...|..|
T Consensus 195 ----~m~LvEIv~g~~Ts~e~~~~~~~l~~~lGk~~v~v~d~pG 234 (460)
T 3k6j_A 195 ----VIRLVEIIYGSHTSSQAIATAFQACESIKKLPVLVGNCKS 234 (460)
T ss_dssp ----TCCEEEEECCSSCCHHHHHHHHHHHHHTTCEEEEESSCCH
T ss_pred ----hCCEEEEEeCCCCCHHHHHHHHHHHHHhCCEEEEEecccH
Confidence 1222223333 3789999999999999999888888544
No 80
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=99.49 E-value=2.3e-13 Score=141.62 Aligned_cols=169 Identities=16% Similarity=0.244 Sum_probs=114.4
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcC-CC-CCCCCCC--------CCCceEEeCCHHH
Q 014700 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHC-NC-RYFPEQK--------LPENVIATTDAKT 195 (420)
Q Consensus 126 ~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~-~~-~~l~~~~--------l~~~i~a~td~~e 195 (420)
.++||+|||+|.||..||..|+++| ++|++||++++.++.+.+.-. .. +...... ...++..+++++
T Consensus 4 ~~~kVgVIGaG~MG~~IA~~la~aG--~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~- 80 (483)
T 3mog_A 4 NVQTVAVIGSGTMGAGIAEVAASHG--HQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIH- 80 (483)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTT--CCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCGG-
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCC--CeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCHH-
Confidence 3579999999999999999999999 999999999998877654200 00 0000000 123567788885
Q ss_pred hccCCcEEEEccChh--hHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCC--CCeEEEECcccHHHH
Q 014700 196 ALLGADYCLHAMPVQ--FSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPR--QPFIALSGPSFALEL 271 (420)
Q Consensus 196 al~~aDiVIlaVp~~--~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~--~~~~vl~GP~~a~ev 271 (420)
++++||+||+|||.. ..+++++++.+.++++++|++.+.++... .+.+.+..+. ....++. |.. +
T Consensus 81 ~~~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~IlasntSti~i~-------~ia~~~~~p~~~ig~hf~~-Pa~---v 149 (483)
T 3mog_A 81 ALAAADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSSISIT-------AIAAEIKNPERVAGLHFFN-PAP---V 149 (483)
T ss_dssp GGGGCSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHH-------HHTTTSSSGGGEEEEEECS-STT---T
T ss_pred HhcCCCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEecCCCCCHH-------HHHHHccCccceEEeeecC-hhh---h
Confidence 589999999999976 45788899999999999988877777653 2333333210 1111222 211 1
Q ss_pred hhcCCeEEEEec--CCHHHHHHHHHHHhcCCceEEEcCChhH
Q 014700 272 MNKLPTAMVVAS--KDRKLANAVQQLLASKHLRISTSSDVTG 311 (420)
Q Consensus 272 ~~g~~t~i~ia~--~d~e~~~~l~~ll~~~g~~v~~s~Di~g 311 (420)
.+...++.+ .+++.++.+.++++..|..++...|..|
T Consensus 150 ---~~Lvevv~g~~Ts~e~~~~~~~l~~~lGk~~v~v~d~~G 188 (483)
T 3mog_A 150 ---MKLVEVVSGLATAAEVVEQLCELTLSWGKQPVRCHSTPG 188 (483)
T ss_dssp ---CCEEEEEECSSCCHHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred ---CCeEEEecCCCCCHHHHHHHHHHHHHhCCEEEEEeccCc
Confidence 122223333 2788999999999999988877777643
No 81
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=99.18 E-value=6.7e-15 Score=136.09 Aligned_cols=165 Identities=14% Similarity=0.166 Sum_probs=108.3
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEE
Q 014700 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (420)
Q Consensus 126 ~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIl 205 (420)
..|||+|||+|+||.++|..|.++| ++|++|+|+++ .+.+...+ +... +++++++++|+||+
T Consensus 18 ~~~~I~iIG~G~mG~~la~~L~~~G--~~V~~~~r~~~-~~~~~~~g--------------~~~~-~~~~~~~~aDvVil 79 (201)
T 2yjz_A 18 KQGVVCIFGTGDFGKSLGLKMLQCG--YSVVFGSRNPQ-VSSLLPRG--------------AEVL-CYSEAASRSDVIVL 79 (201)
Confidence 3679999999999999999999988 89999999876 44333221 2333 56677889999999
Q ss_pred ccChhhHHHHHHHhhhcCCCCCeEEEeccCCCcchh-hhHHHHHHHHhCCCCCCeEEEECcccHHHHhh-c----CCeEE
Q 014700 206 AMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTL-RMMSQIIPQALRNPRQPFIALSGPSFALELMN-K----LPTAM 279 (420)
Q Consensus 206 aVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~-~~~se~l~~~lg~~~~~~~vl~GP~~a~ev~~-g----~~t~i 279 (420)
|||.+.+++++ ++.+. .++++||++++|+..... ..-.+.+.+.++.. -.+..-|+....... + ..+ .
T Consensus 80 av~~~~~~~v~-~l~~~-~~~~ivI~~~~G~~~~~~~~~~~~~l~~~~~~~---~vvra~~n~~a~~~~~g~l~g~~~-~ 153 (201)
T 2yjz_A 80 AVHREHYDFLA-ELADS-LKGRVLIDVSNNQKMNQYPESNAEYLAQLVPGA---HVVKAFNTISAWALQSGTLDASRQ-V 153 (201)
Confidence 99998888877 55543 468899999999853100 00012344433321 111222332222211 1 111 2
Q ss_pred EEecCCHHHHHHHHHHHhcCCceEEEcCChhHHHH
Q 014700 280 VVASKDRKLANAVQQLLASKHLRISTSSDVTGVEI 314 (420)
Q Consensus 280 ~ia~~d~e~~~~l~~ll~~~g~~v~~s~Di~g~e~ 314 (420)
++++.+.+..++++++|+..|++++..+++....|
T Consensus 154 ~~~g~~~~~~~~v~~ll~~~G~~~~~~G~l~~a~~ 188 (201)
T 2yjz_A 154 FVCGNDSKAKDRVMDIARTLGLTPLDQGSLVAAKE 188 (201)
Confidence 34456778889999999999999887777644334
No 82
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=99.44 E-value=1.7e-12 Score=141.22 Aligned_cols=168 Identities=13% Similarity=0.173 Sum_probs=114.7
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHh-------cCCCCCCCC---CCCCCceEEeCCHHH
Q 014700 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK-------HCNCRYFPE---QKLPENVIATTDAKT 195 (420)
Q Consensus 126 ~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~-------g~~~~~l~~---~~l~~~i~a~td~~e 195 (420)
.++||+|||+|.||+.||..|+++| ++|++||++++.++...+. ......++. .....+++.++|+ +
T Consensus 311 ~~~kV~VIGaG~MG~~iA~~la~aG--~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~ 387 (725)
T 2wtb_A 311 KIKKVAIIGGGLMGSGIATALILSN--YPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDY-E 387 (725)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHTTT--CCEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEESSS-G
T ss_pred cCcEEEEEcCCHhhHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeCCH-H
Confidence 3679999999999999999999999 9999999999877664321 000001111 1134567888888 5
Q ss_pred hccCCcEEEEccChhh--HHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCC--CCeEEEECcccHHHH
Q 014700 196 ALLGADYCLHAMPVQF--SSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPR--QPFIALSGPSFALEL 271 (420)
Q Consensus 196 al~~aDiVIlaVp~~~--l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~--~~~~vl~GP~~a~ev 271 (420)
++++||+||+|||... .+.+++++.++++++++|++.+.++... .+.+.+..+. ....++ .|..
T Consensus 388 ~~~~aDlVIeaVpe~~~vk~~v~~~l~~~~~~~~IlasntStl~i~-------~la~~~~~p~~~iG~hf~-~P~~---- 455 (725)
T 2wtb_A 388 SFRDVDMVIEAVIENISLKQQIFADLEKYCPQHCILASNTSTIDLN-------KIGERTKSQDRIVGAHFF-SPAH---- 455 (725)
T ss_dssp GGTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHH-------HHTTTCSCTTTEEEEEEC-SSTT----
T ss_pred HHCCCCEEEEcCcCCHHHHHHHHHHHHhhCCCCcEEEeCCCCCCHH-------HHHHHhcCCCCEEEecCC-CCcc----
Confidence 6899999999999754 6778889999999999988877777653 1333332211 111122 2322
Q ss_pred hhcCCeEEEEec--CCHHHHHHHHHHHhcCCceEEEcCChh
Q 014700 272 MNKLPTAMVVAS--KDRKLANAVQQLLASKHLRISTSSDVT 310 (420)
Q Consensus 272 ~~g~~t~i~ia~--~d~e~~~~l~~ll~~~g~~v~~s~Di~ 310 (420)
..+...++.+ .+++.++.+.++++..|..+++..|..
T Consensus 456 --~~~lvevv~g~~t~~e~~~~~~~l~~~lGk~~v~v~d~~ 494 (725)
T 2wtb_A 456 --IMPLLEIVRTNHTSAQVIVDLLDVGKKIKKTPVVVGNCT 494 (725)
T ss_dssp --TCCEEEEEECSSCCHHHHHHHHHHHHHTTCEEEEEESST
T ss_pred --cCceEEEEECCCCCHHHHHHHHHHHHHhCCEEEEECCCc
Confidence 1222333443 378999999999999998887777753
No 83
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=99.40 E-value=2.4e-11 Score=120.74 Aligned_cols=175 Identities=18% Similarity=0.260 Sum_probs=116.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHH-HHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEE
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAV-CQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~-~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIl 205 (420)
.|||+|||+|.||.++|..|.++| ++|++|+|+++. .+...+.| +.++ +++++++++|+||+
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~~G--~~V~~~~~~~~~~~~~a~~~G--------------~~~~-~~~e~~~~aDvVil 78 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKDSG--VDVTVGLRSGSATVAKAEAHG--------------LKVA-DVKTAVAAADVVMI 78 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTT--CCEEEECCTTCHHHHHHHHTT--------------CEEE-CHHHHHHTCSEEEE
T ss_pred CCEEEEECchHHHHHHHHHHHHCc--CEEEEEECChHHHHHHHHHCC--------------CEEc-cHHHHHhcCCEEEE
Confidence 579999999999999999999998 899999998755 44444433 2334 77888899999999
Q ss_pred ccChhhHHHHHH-HhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCeE--EEECcccHH-HHhh---cCCeE
Q 014700 206 AMPVQFSSSFLE-GISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFI--ALSGPSFAL-ELMN---KLPTA 278 (420)
Q Consensus 206 aVp~~~l~~vl~-~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~~--vl~GP~~a~-ev~~---g~~t~ 278 (420)
|||.....++++ ++.++++++++|+++ .|+.. .+.+........+. .-.||.++. ++.. +.+..
T Consensus 79 avp~~~~~~v~~~~i~~~l~~~~ivi~~-~gv~~--------~~~~~~~~~~~~vv~~~P~gp~~a~~~l~~~G~g~~~i 149 (338)
T 1np3_A 79 LTPDEFQGRLYKEEIEPNLKKGATLAFA-HGFSI--------HYNQVVPRADLDVIMIAPKAPGHTVRSEFVKGGGIPDL 149 (338)
T ss_dssp CSCHHHHHHHHHHHTGGGCCTTCEEEES-CCHHH--------HTTSSCCCTTCEEEEEEESSCSHHHHHHHHTTCCCCEE
T ss_pred eCCcHHHHHHHHHHHHhhCCCCCEEEEc-CCchh--------HHHhhcCCCCcEEEeccCCCCchhHHHHHhccCCCeEE
Confidence 999999999998 999999999988876 46431 11222111101111 114666653 4444 66655
Q ss_pred EEEe-cCCHHHHHHHHHHHhcCCc-e--EEEcC----C---hhHHH--HHHHHHHHHHHHHH
Q 014700 279 MVVA-SKDRKLANAVQQLLASKHL-R--ISTSS----D---VTGVE--IAGALKNVLAIAAG 327 (420)
Q Consensus 279 i~ia-~~d~e~~~~l~~ll~~~g~-~--v~~s~----D---i~g~e--~~~alkNv~Ai~~G 327 (420)
+... ..+.+..+.+.++++..|. + +...+ | ..+.. +++.+.|+++.+..
T Consensus 150 i~~~~~~~~~a~~~~~~l~~~lG~~~agv~~~~~~~~~~~~~~~s~~~l~G~lp~~ia~~~e 211 (338)
T 1np3_A 150 IAIYQDASGNAKNVALSYACGVGGGRTGIIETTFKDETETDLFGEQAVLCGGCVELVKAGFE 211 (338)
T ss_dssp EEEEECSSSCHHHHHHHHHHHTTHHHHCEEECCHHHHHHHHHHHHHHTTTHHHHHHHHHHHH
T ss_pred EEecCCCCHHHHHHHHHHHHHcCCCccceEeechhcccchHHHHHHHHHhhhHHHHHHHHHH
Confidence 4443 3355677889999999887 4 55432 1 12211 34447777666553
No 84
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=99.39 E-value=1.1e-11 Score=134.64 Aligned_cols=168 Identities=14% Similarity=0.170 Sum_probs=111.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHh---c----CCCCCCCC---CCCCCceEEeCCHHH
Q 014700 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK---H----CNCRYFPE---QKLPENVIATTDAKT 195 (420)
Q Consensus 126 ~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~---g----~~~~~l~~---~~l~~~i~a~td~~e 195 (420)
.++||+|||+|.||+.||..|+++| ++|++||++++.++...+. . .....+.. .....+++.++|+ +
T Consensus 313 ~i~kV~VIGaG~MG~~iA~~la~aG--~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~ 389 (715)
T 1wdk_A 313 DVKQAAVLGAGIMGGGIAYQSASKG--TPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSY-G 389 (715)
T ss_dssp CCSSEEEECCHHHHHHHHHHHHHTT--CCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESSS-T
T ss_pred cCCEEEEECCChhhHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEEECCH-H
Confidence 3679999999999999999999999 9999999999877653210 0 00000000 0011246777888 6
Q ss_pred hccCCcEEEEccChhh--HHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCeEE--EECcccHHHH
Q 014700 196 ALLGADYCLHAMPVQF--SSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIA--LSGPSFALEL 271 (420)
Q Consensus 196 al~~aDiVIlaVp~~~--l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~~v--l~GP~~a~ev 271 (420)
++++||+||+|||... .+.+++++.++++++++|++.+.++... .+.+.+..+ ..+.- +..|..
T Consensus 390 ~~~~aDlVIeaV~e~~~vk~~v~~~l~~~~~~~~IlasntStl~i~-------~la~~~~~~-~~~ig~hf~~P~~---- 457 (715)
T 1wdk_A 390 DFGNVDLVVEAVVENPKVKQAVLAEVENHVREDAILASNTSTISIS-------LLAKALKRP-ENFVGMHFFNPVH---- 457 (715)
T ss_dssp TGGGCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHH-------HHGGGCSCG-GGEEEEECCSSTT----
T ss_pred HHCCCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCCCHH-------HHHHHhcCc-cceEEEEccCCcc----
Confidence 6899999999999653 6778889999999999998887777653 233333221 11111 112322
Q ss_pred hhcCCeEEEEec--CCHHHHHHHHHHHhcCCceEEEcCChh
Q 014700 272 MNKLPTAMVVAS--KDRKLANAVQQLLASKHLRISTSSDVT 310 (420)
Q Consensus 272 ~~g~~t~i~ia~--~d~e~~~~l~~ll~~~g~~v~~s~Di~ 310 (420)
..+...++.+ .+++.++.+.++++..|..+++..|..
T Consensus 458 --~~~lvevv~g~~t~~e~~~~~~~l~~~lGk~~v~v~d~~ 496 (715)
T 1wdk_A 458 --MMPLVEVIRGEKSSDLAVATTVAYAKKMGKNPIVVNDCP 496 (715)
T ss_dssp --TCCEEEEEECSSCCHHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred --cCceEEEEECCCCCHHHHHHHHHHHHHhCCEeEEEcCCC
Confidence 1222223333 378999999999999998887777753
No 85
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=99.39 E-value=4.4e-13 Score=129.27 Aligned_cols=151 Identities=11% Similarity=0.126 Sum_probs=92.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeE-EEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEE
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKV-YMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V-~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIl 205 (420)
+|||+|||+|.||.+++..|+++ ++| .+|+|+++..+.+.+.. +. .+++++++++++|+||+
T Consensus 2 ~m~I~iIG~G~mG~~la~~l~~~---~~v~~v~~~~~~~~~~~~~~~-------------g~-~~~~~~~~~~~~DvVil 64 (276)
T 2i76_A 2 SLVLNFVGTGTLTRFFLECLKDR---YEIGYILSRSIDRARNLAEVY-------------GG-KAATLEKHPELNGVVFV 64 (276)
T ss_dssp --CCEEESCCHHHHHHHHTTC-------CCCEECSSHHHHHHHHHHT-------------CC-CCCSSCCCCC---CEEE
T ss_pred CceEEEEeCCHHHHHHHHHHHHc---CcEEEEEeCCHHHHHHHHHHc-------------CC-ccCCHHHHHhcCCEEEE
Confidence 57999999999999999999875 588 59999999888876531 01 23456666788999999
Q ss_pred ccChhhHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCeEEEECcccHHHHhhcCCeEEEEecCC
Q 014700 206 AMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVASKD 285 (420)
Q Consensus 206 aVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~~vl~GP~~a~ev~~g~~t~i~ia~~d 285 (420)
|||.+.+.++++++. .++++||+++.++..+. +.+......++...+.|+....+...+.+ +.+.+ +
T Consensus 65 av~~~~~~~v~~~l~---~~~~ivi~~s~~~~~~~-------l~~~~~~~~~p~~~~~g~~~~~~~~~~~~--~~~~~-~ 131 (276)
T 2i76_A 65 IVPDRYIKTVANHLN---LGDAVLVHCSGFLSSEI-------FKKSGRASIHPNFSFSSLEKALEMKDQIV--FGLEG-D 131 (276)
T ss_dssp CSCTTTHHHHHTTTC---CSSCCEEECCSSSCGGG-------GCSSSEEEEEECSCC--CTTGGGCGGGCC--EEECC-C
T ss_pred eCChHHHHHHHHHhc---cCCCEEEECCCCCcHHH-------HHHhhccccchhhhcCCCchhHHHhCCCe--EEEEe-C
Confidence 999999999988875 57889999886655432 11111100011122344322222223333 22333 4
Q ss_pred HHHHHHHHHHHhcCCceEEEcC
Q 014700 286 RKLANAVQQLLASKHLRISTSS 307 (420)
Q Consensus 286 ~e~~~~l~~ll~~~g~~v~~s~ 307 (420)
++..+.++++|+..|.+++..+
T Consensus 132 ~~~~~~~~~l~~~lG~~~~~v~ 153 (276)
T 2i76_A 132 ERGLPIVKKIAEEISGKYFVIP 153 (276)
T ss_dssp TTTHHHHHHHHHHHCSCEEECC
T ss_pred hHHHHHHHHHHHHhCCCEEEEC
Confidence 4557889999998887666554
No 86
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=99.39 E-value=9.4e-12 Score=128.85 Aligned_cols=166 Identities=15% Similarity=0.165 Sum_probs=111.4
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHh-----------cCCCCCCCCCCCCCceEEeCCHH
Q 014700 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK-----------HCNCRYFPEQKLPENVIATTDAK 194 (420)
Q Consensus 126 ~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~-----------g~~~~~l~~~~l~~~i~a~td~~ 194 (420)
.++||+|||+|.||+.||..|+++| ++|++||++++.++...+. |.. -+...-....++++++
T Consensus 36 ~~~kV~VIGaG~MG~~iA~~la~~G--~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~---~~~~~~~~~~~i~~~~- 109 (463)
T 1zcj_A 36 PVSSVGVLGLGTMGRGIAISFARVG--ISVVAVESDPKQLDAAKKIITFTLEKEASRAHQ---NGQASAKPKLRFSSST- 109 (463)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTT--CEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCEEEESCG-
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCC---CHHHHHHHHhhhcCCH-
Confidence 4679999999999999999999998 9999999999877665431 100 0000001123456777
Q ss_pred HhccCCcEEEEccChh--hHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCC--CCeEEEECcccHHH
Q 014700 195 TALLGADYCLHAMPVQ--FSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPR--QPFIALSGPSFALE 270 (420)
Q Consensus 195 eal~~aDiVIlaVp~~--~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~--~~~~vl~GP~~a~e 270 (420)
+++++||+||+|||.. ..+++++++.++++++++|++.+.++... .+.+.+..+. ....++ .|..
T Consensus 110 ~~~~~aDlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~snTs~~~~~-------~la~~~~~~~~~ig~hf~-~P~~--- 178 (463)
T 1zcj_A 110 KELSTVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSALNVD-------DIASSTDRPQLVIGTHFF-SPAH--- 178 (463)
T ss_dssp GGGTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHH-------HHHTTSSCGGGEEEEEEC-SSTT---
T ss_pred HHHCCCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCcCHH-------HHHHHhcCCcceEEeecC-CCcc---
Confidence 4688999999999975 35778889999999999998877666532 2333332210 011122 3432
Q ss_pred HhhcCCeEEEEe--cCCHHHHHHHHHHHhcCCceEEEcCChhH
Q 014700 271 LMNKLPTAMVVA--SKDRKLANAVQQLLASKHLRISTSSDVTG 311 (420)
Q Consensus 271 v~~g~~t~i~ia--~~d~e~~~~l~~ll~~~g~~v~~s~Di~g 311 (420)
..+...++. ..+++.++.+.++++..|..+++..|..|
T Consensus 179 ---~~~lvevv~g~~t~~e~~~~~~~l~~~lGk~~v~v~~~~g 218 (463)
T 1zcj_A 179 ---VMRLLEVIPSRYSSPTTIATVMSLSKKIGKIGVVVGNCYG 218 (463)
T ss_dssp ---TCCEEEEEECSSCCHHHHHHHHHHHHHTTCEEEEBCCSTT
T ss_pred ---cceeEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEECCCcc
Confidence 122222333 35789999999999999988887777543
No 87
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=99.28 E-value=5.2e-11 Score=122.41 Aligned_cols=161 Identities=14% Similarity=0.130 Sum_probs=107.8
Q ss_pred hhhcCCCeEEEEcccHHHHHHHHHHHhc------CCCCeEEEEeCCHH-HHHHHHHhcCCCCCCCCCCCCCceEEeCCHH
Q 014700 122 DILERTNKVVVLGGGSFGTAMAAHVANK------KSQLKVYMLMRDPA-VCQSINEKHCNCRYFPEQKLPENVIATTDAK 194 (420)
Q Consensus 122 ~~~~~~mkI~IIGaGamG~alA~~La~a------G~~~~V~l~~r~~~-~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~ 194 (420)
+.+..++||+|||+|+||.++|..|.++ | ++|++..|... ..+...+.|.... . ....+++
T Consensus 49 ~~L~GiKkIgIIGlGsMG~AmA~nLr~s~~~~g~G--~~ViVg~r~~sks~e~A~e~G~~v~-------d---~ta~s~a 116 (525)
T 3fr7_A 49 EAFKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSD--IVVKIGLRKGSKSFDEARAAGFTEE-------S---GTLGDIW 116 (525)
T ss_dssp HHTTTCSEEEEECCTTHHHHHHHHHHHHHHHTTCC--CEEEEEECTTCSCHHHHHHTTCCTT-------T---TCEEEHH
T ss_pred HHhcCCCEEEEEeEhHHHHHHHHHHHhcccccCCC--CEEEEEeCCchhhHHHHHHCCCEEe-------c---CCCCCHH
Confidence 4444448999999999999999999998 8 89987776543 2333444443210 0 0123678
Q ss_pred HhccCCcEEEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHH---HhCCCCCCeEEEECcccHHHH
Q 014700 195 TALLGADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQ---ALRNPRQPFIALSGPSFALEL 271 (420)
Q Consensus 195 eal~~aDiVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~---~lg~~~~~~~vl~GP~~a~ev 271 (420)
+++++||+||++||.....+++++|.++++++++ |++.-|+... .+.+ .++.. . -.+...|+.+...
T Consensus 117 EAa~~ADVVILaVP~~~~~eVl~eI~p~LK~GaI-Ls~AaGf~I~-------~le~~~i~~p~d-v-~VVrVmPNtPg~~ 186 (525)
T 3fr7_A 117 ETVSGSDLVLLLISDAAQADNYEKIFSHMKPNSI-LGLSHGFLLG-------HLQSAGLDFPKN-I-SVIAVCPKGMGPS 186 (525)
T ss_dssp HHHHHCSEEEECSCHHHHHHHHHHHHHHSCTTCE-EEESSSHHHH-------HHHHTTCCCCTT-S-EEEEEEESSCHHH
T ss_pred HHHhcCCEEEECCChHHHHHHHHHHHHhcCCCCe-EEEeCCCCHH-------HHhhhcccCCCC-C-cEEEEecCCCchh
Confidence 8999999999999998888899999999999988 5667786532 2333 22221 1 2455666655443
Q ss_pred -------h-----hcCCeEEEEec-CCHHHHHHHHHHHhcCCceEE
Q 014700 272 -------M-----NKLPTAMVVAS-KDRKLANAVQQLLASKHLRIS 304 (420)
Q Consensus 272 -------~-----~g~~t~i~ia~-~d~e~~~~l~~ll~~~g~~v~ 304 (420)
+ .|.+..+.+.. .+.+..+.+..++...|....
T Consensus 187 VR~~y~~G~~~~g~Gv~~liAv~qd~tgea~e~alala~aiG~~~v 232 (525)
T 3fr7_A 187 VRRLYVQGKEINGAGINSSFAVHQDVDGRATDVALGWSVALGSPFT 232 (525)
T ss_dssp HHHHHHHHTTSTTCSCCEEEEEEECSSSCHHHHHHHHHHHTTCSEE
T ss_pred HHHHHhcccccccCCccEEEEcCCCCCHHHHHHHHHHHHHCCCCee
Confidence 2 35554544433 234667888899998887543
No 88
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=99.23 E-value=4e-10 Score=111.05 Aligned_cols=170 Identities=14% Similarity=0.166 Sum_probs=113.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHH-----------hcCCCCCCCCCCCCCceEEeCCHHH
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE-----------KHCNCRYFPEQKLPENVIATTDAKT 195 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~-----------~g~~~~~l~~~~l~~~i~a~td~~e 195 (420)
..||+|||+|.||+.+|..++.+| ++|++||++++.++...+ .+.....+.....-..+..++|+++
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G--~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~~l~~ 83 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGG--FRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAE 83 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTT--CCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccccchHh
Confidence 469999999999999999999999 999999999876543221 1110000000001135778889999
Q ss_pred hccCCcEEEEccCh--hhHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCeEE--EECcccHHHH
Q 014700 196 ALLGADYCLHAMPV--QFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIA--LSGPSFALEL 271 (420)
Q Consensus 196 al~~aDiVIlaVp~--~~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~~v--l~GP~~a~ev 271 (420)
++++||+||-|||. ..-++++++|..++++++++-+.+.++.+. .+.+.+..+ ..+.. +..|.+...
T Consensus 84 a~~~ad~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaSNTSsl~is-------~ia~~~~~p-~r~ig~HffNP~~~m~- 154 (319)
T 3ado_A 84 AVEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPS-------KLFTGLAHV-KQCIVAHPVNPPYYIP- 154 (319)
T ss_dssp HTTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHH-------HHHTTCTTG-GGEEEEEECSSTTTCC-
T ss_pred HhccCcEEeeccccHHHHHHHHHHHHHHHhhhcceeehhhhhccch-------hhhhhccCC-CcEEEecCCCCccccc-
Confidence 99999999999995 457889999999999999999888888764 233333322 12222 123332210
Q ss_pred hhcCCeEEEEe-cCCHHHHHHHHHHHhcCCceEE-EcCChhH
Q 014700 272 MNKLPTAMVVA-SKDRKLANAVQQLLASKHLRIS-TSSDVTG 311 (420)
Q Consensus 272 ~~g~~t~i~ia-~~d~e~~~~l~~ll~~~g~~v~-~s~Di~g 311 (420)
..-++-+ ..+++.++++.++++..|.... ...|..|
T Consensus 155 ----LVEiv~g~~Ts~~~~~~~~~~~~~~gk~pv~v~kd~pG 192 (319)
T 3ado_A 155 ----LVELVPHPETSPATVDRTHALMRKIGQSPVRVLKEIDG 192 (319)
T ss_dssp ----EEEEEECTTCCHHHHHHHHHHHHHTTCEEEECSSCCTT
T ss_pred ----hHHhcCCCCCcHHHHHHHHHHHHHhCCccCCcCCCCCC
Confidence 1112222 2468899999999999987754 5567644
No 89
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=99.11 E-value=2e-10 Score=108.23 Aligned_cols=134 Identities=17% Similarity=0.168 Sum_probs=95.3
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEE
Q 014700 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (420)
Q Consensus 126 ~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIl 205 (420)
..|||+|||+|.||++||..|.++| ++|++|++. ++ +.+|| |+
T Consensus 5 ~~mkI~IIG~G~~G~sLA~~L~~~G--~~V~~~~~~--------------------------------~~-~~~aD--il 47 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTVNMAEKLDSVG--HYVTVLHAP--------------------------------ED-IRDFE--LV 47 (232)
T ss_dssp CCCEEEEECCSCCCSCHHHHHHHTT--CEEEECSSG--------------------------------GG-GGGCS--EE
T ss_pred CCcEEEEEeeCHHHHHHHHHHHHCC--CEEEEecCH--------------------------------HH-hccCC--EE
Confidence 3589999999999999999999998 999999882 12 45688 99
Q ss_pred ccChhhHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCeEEEEC-cccHHHHhhcCCeEEEEecC
Q 014700 206 AMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSG-PSFALELMNKLPTAMVVASK 284 (420)
Q Consensus 206 aVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~~vl~G-P~~a~ev~~g~~t~i~ia~~ 284 (420)
|||...+.++++++.++++++++|++++..+..+ .+.. +.+ .|. .++.+ |-+ +.+ ..+...
T Consensus 48 avP~~ai~~vl~~l~~~l~~g~ivvd~sgs~~~~---vl~~-~~~-~g~-----~fvg~HPm~------g~~--~~i~a~ 109 (232)
T 3dfu_A 48 VIDAHGVEGYVEKLSAFARRGQMFLHTSLTHGIT---VMDP-LET-SGG-----IVMSAHPIG------QDR--WVASAL 109 (232)
T ss_dssp EECSSCHHHHHHHHHTTCCTTCEEEECCSSCCGG---GGHH-HHH-TTC-----EEEEEEEEE------TTE--EEEEES
T ss_pred EEcHHHHHHHHHHHHHhcCCCCEEEEECCcCHHH---HHHH-HHh-CCC-----cEEEeeeCC------CCc--eeeeCC
Confidence 9999999999999999999999999886333322 1111 112 122 22221 321 222 233345
Q ss_pred CHHHHHHHHHHHhcCCceEEEcCChhHHHH
Q 014700 285 DRKLANAVQQLLASKHLRISTSSDVTGVEI 314 (420)
Q Consensus 285 d~e~~~~l~~ll~~~g~~v~~s~Di~g~e~ 314 (420)
+++..+.++++++..|.+++..++-....+
T Consensus 110 d~~a~~~l~~L~~~lG~~vv~~~~~~hd~~ 139 (232)
T 3dfu_A 110 DELGETIVGLLVGELGGSIVEIADDKRAQL 139 (232)
T ss_dssp SHHHHHHHHHHHHHTTCEECCCCGGGHHHH
T ss_pred CHHHHHHHHHHHHHhCCEEEEeCHHHHhHH
Confidence 778899999999999999887765444433
No 90
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=99.10 E-value=9.1e-11 Score=116.25 Aligned_cols=135 Identities=13% Similarity=0.194 Sum_probs=94.8
Q ss_pred ccCCccccchhhhchhcceeccccccccccchhhcCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHH
Q 014700 91 TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (420)
Q Consensus 91 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~ 170 (420)
++-...++.++.+.|.+ |.+. ...+.++. .|+|+|||+|.||..+|..|+..| ++|++|+|+++..+...+
T Consensus 126 R~~~~~~~~~~~~~w~~---~~~~--~~~~~~l~--g~~vgIIG~G~iG~~iA~~l~~~G--~~V~~~d~~~~~~~~~~~ 196 (330)
T 2gcg_A 126 RRLPEAIEEVKNGGWTS---WKPL--WLCGYGLT--QSTVGIIGLGRIGQAIARRLKPFG--VQRFLYTGRQPRPEEAAE 196 (330)
T ss_dssp TTHHHHHHHHHTTCCCS---CCTT--SSCBCCCT--TCEEEEECCSHHHHHHHHHHGGGT--CCEEEEESSSCCHHHHHT
T ss_pred hCHHHHHHHHHcCCCcc---cCcc--cccCcCCC--CCEEEEECcCHHHHHHHHHHHHCC--CEEEEECCCCcchhHHHh
Confidence 55667788889998865 4421 11122333 689999999999999999999888 899999987654444433
Q ss_pred hcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEccChh-hHHHHH-HHhhhcCCCCCeEEEeccCCCcchhhhHHHHH
Q 014700 171 KHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFL-EGISDYVDPGLPFISLSKGLELNTLRMMSQII 248 (420)
Q Consensus 171 ~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIlaVp~~-~l~~vl-~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l 248 (420)
.+ +... +++++++++|+|++++|.. .++.++ +++.+.+++++++|+++.|-..++ ..+.+.+
T Consensus 197 ~g--------------~~~~-~l~e~l~~aDvVi~~vp~~~~t~~~i~~~~~~~mk~gailIn~srg~~v~~-~aL~~aL 260 (330)
T 2gcg_A 197 FQ--------------AEFV-STPELAAQSDFIVVACSLTPATEGLCNKDFFQKMKETAVFINISRGDVVNQ-DDLYQAL 260 (330)
T ss_dssp TT--------------CEEC-CHHHHHHHCSEEEECCCCCTTTTTCBSHHHHHHSCTTCEEEECSCGGGBCH-HHHHHHH
T ss_pred cC--------------ceeC-CHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhcCCCCcEEEECCCCcccCH-HHHHHHH
Confidence 22 2333 7888889999999999964 455555 455667888999999998744332 3344445
Q ss_pred HH
Q 014700 249 PQ 250 (420)
Q Consensus 249 ~~ 250 (420)
.+
T Consensus 261 ~~ 262 (330)
T 2gcg_A 261 AS 262 (330)
T ss_dssp HH
T ss_pred Hc
Confidence 44
No 91
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=99.09 E-value=1.2e-10 Score=115.58 Aligned_cols=137 Identities=15% Similarity=0.258 Sum_probs=97.0
Q ss_pred ccCCccccchhhhchhcc-eeccccccccccchhhcCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH
Q 014700 91 TRDGRDRRKIVKVAWEKL-VRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSIN 169 (420)
Q Consensus 91 ~~~~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~ 169 (420)
++-...+|.++.+.|.+. +.|.+. ...+.++. .|+|+|||+|.||..+|..|+..| ++|++|+|+++. +...
T Consensus 117 R~~~~~~~~~~~~~w~~~~~~~~~~--~~~~~~l~--g~~vgIIG~G~iG~~iA~~l~~~G--~~V~~~d~~~~~-~~~~ 189 (334)
T 2dbq_A 117 RHVVKGDRFVRSGEWKKRGVAWHPK--WFLGYDVY--GKTIGIIGLGRIGQAIAKRAKGFN--MRILYYSRTRKE-EVER 189 (334)
T ss_dssp HTHHHHHHHHHTSHHHHTTCCCCTT--TTCCCCCT--TCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSCCH-HHHH
T ss_pred hCHHHHHHHHHcCCCcccccccccc--cccccCCC--CCEEEEEccCHHHHHHHHHHHhCC--CEEEEECCCcch-hhHh
Confidence 566677888999988621 135421 11122333 689999999999999999999988 899999998765 4333
Q ss_pred HhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEccChhh-HHHHH-HHhhhcCCCCCeEEEeccCCCcchhhhHHHH
Q 014700 170 EKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQF-SSSFL-EGISDYVDPGLPFISLSKGLELNTLRMMSQI 247 (420)
Q Consensus 170 ~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIlaVp~~~-l~~vl-~~i~~~l~~~~iVVs~snGi~~~t~~~~se~ 247 (420)
+.| +.. .++++++++||+|++++|... ++.++ +++.+.+++++++|++++|...++ ..+.+.
T Consensus 190 ~~g--------------~~~-~~l~~~l~~aDvVil~vp~~~~t~~~i~~~~~~~mk~~ailIn~srg~~v~~-~aL~~a 253 (334)
T 2dbq_A 190 ELN--------------AEF-KPLEDLLRESDFVVLAVPLTRETYHLINEERLKLMKKTAILINIARGKVVDT-NALVKA 253 (334)
T ss_dssp HHC--------------CEE-CCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCH-HHHHHH
T ss_pred hcC--------------ccc-CCHHHHHhhCCEEEECCCCChHHHHhhCHHHHhcCCCCcEEEECCCCcccCH-HHHHHH
Confidence 332 122 378888899999999999755 55555 456677889999999998865543 234444
Q ss_pred HHH
Q 014700 248 IPQ 250 (420)
Q Consensus 248 l~~ 250 (420)
+.+
T Consensus 254 L~~ 256 (334)
T 2dbq_A 254 LKE 256 (334)
T ss_dssp HHH
T ss_pred HHh
Confidence 544
No 92
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=99.04 E-value=3.6e-10 Score=112.97 Aligned_cols=138 Identities=11% Similarity=0.107 Sum_probs=98.2
Q ss_pred ccCCccccchhhhchhcce----eccccccccccchhhcCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHH
Q 014700 91 TRDGRDRRKIVKVAWEKLV----RWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQ 166 (420)
Q Consensus 91 ~~~~~~~r~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~ 166 (420)
|+-...+|.++.|.|++.. .|.+.+ ..+.++. .++|||||+|.||..+|..|...| ++|++|+|+... +
T Consensus 124 R~~~~~~~~~~~g~W~~~~~~~~~~~~~~--~~~~~l~--g~tvGIIGlG~IG~~vA~~l~~~G--~~V~~~d~~~~~-~ 196 (352)
T 3gg9_A 124 RRIPQYVASLKHGAWQQSGLKSTTMPPNF--GIGRVLK--GQTLGIFGYGKIGQLVAGYGRAFG--MNVLVWGRENSK-E 196 (352)
T ss_dssp TTHHHHHHHHHTTCTTCCCCCCTTSCTTT--TSBCCCT--TCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSHHHH-H
T ss_pred hhHHHHHHHHHcCCCCccccccccccccc--ccCccCC--CCEEEEEeECHHHHHHHHHHHhCC--CEEEEECCCCCH-H
Confidence 6666788889999898742 355311 1223333 689999999999999999999887 999999998633 3
Q ss_pred HHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEccChh-hHHHHH-HHhhhcCCCCCeEEEeccCCCcchhhhH
Q 014700 167 SINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFL-EGISDYVDPGLPFISLSKGLELNTLRMM 244 (420)
Q Consensus 167 ~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIlaVp~~-~l~~vl-~~i~~~l~~~~iVVs~snGi~~~t~~~~ 244 (420)
...+.| +...+++++++++||+|++++|.. .++.++ ++..+.++++.++|+++.|-..++ +.+
T Consensus 197 ~~~~~g--------------~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~-~aL 261 (352)
T 3gg9_A 197 RARADG--------------FAVAESKDALFEQSDVLSVHLRLNDETRSIITVADLTRMKPTALFVNTSRAELVEE-NGM 261 (352)
T ss_dssp HHHHTT--------------CEECSSHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCT-THH
T ss_pred HHHhcC--------------ceEeCCHHHHHhhCCEEEEeccCcHHHHHhhCHHHHhhCCCCcEEEECCCchhhcH-HHH
Confidence 333332 244458899999999999999953 455444 345677899999999998765443 334
Q ss_pred HHHHHH
Q 014700 245 SQIIPQ 250 (420)
Q Consensus 245 se~l~~ 250 (420)
.+.+.+
T Consensus 262 ~~aL~~ 267 (352)
T 3gg9_A 262 VTALNR 267 (352)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 455544
No 93
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=99.04 E-value=7.4e-10 Score=108.45 Aligned_cols=104 Identities=13% Similarity=0.095 Sum_probs=77.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHh--cCCCCCCCCCCCCCceEE-eCCHHHhccCCcEE
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK--HCNCRYFPEQKLPENVIA-TTDAKTALLGADYC 203 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~--g~~~~~l~~~~l~~~i~a-~td~~eal~~aDiV 203 (420)
||||+|||+|.||+++|..|+++|..++|++|||++++++.+... +.. .+. +..+.+ ++++ +++++||+|
T Consensus 1 m~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~-~~~-----~~~~~~~~~d~-~~~~~aDvV 73 (309)
T 1hyh_A 1 ARKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAM-ANL-----EAHGNIVINDW-AALADADVV 73 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHG-GGS-----SSCCEEEESCG-GGGTTCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhh-hhc-----CCCeEEEeCCH-HHhCCCCEE
Confidence 479999999999999999999987436999999999887766532 111 011 112333 4677 678999999
Q ss_pred EEccChhh--------------------HHHHHHHhhhcCCCCCeEEEeccCCCc
Q 014700 204 LHAMPVQF--------------------SSSFLEGISDYVDPGLPFISLSKGLEL 238 (420)
Q Consensus 204 IlaVp~~~--------------------l~~vl~~i~~~l~~~~iVVs~snGi~~ 238 (420)
|+++|... ++++++.+.++. ++.+|+.++|+++.
T Consensus 74 iiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~-~~~~ii~~tNp~~~ 127 (309)
T 1hyh_A 74 ISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESG-FHGVLVVISNPVDV 127 (309)
T ss_dssp EECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTT-CCSEEEECSSSHHH
T ss_pred EEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEEcCcHHH
Confidence 99999755 478888887765 57777779997653
No 94
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=99.04 E-value=6.4e-10 Score=108.85 Aligned_cols=103 Identities=12% Similarity=0.296 Sum_probs=76.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCC--eEEEEeCCHHHHH--HHH-HhcCCCCCCCCCCCCCceEEeCCHHHhccCCc
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQL--KVYMLMRDPAVCQ--SIN-EKHCNCRYFPEQKLPENVIATTDAKTALLGAD 201 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~--~V~l~~r~~~~~~--~i~-~~g~~~~~l~~~~l~~~i~a~td~~eal~~aD 201 (420)
+|||+|||+|+||+++|..|+.+| + +|++++|++++++ .+. ..+. .+.+ +..+..+++. ++++++|
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g--~~~~V~l~d~~~~~~~~~~~~~~~~~--~~~~----~~~v~~~~~~-~~~~~aD 77 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRG--IAREIVLEDIAKERVEAEVLDMQHGS--SFYP----TVSIDGSDDP-EICRDAD 77 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CCSEEEEECSSHHHHHHHHHHHHHTG--GGST----TCEEEEESCG-GGGTTCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CCCEEEEEeCChhHHHHHHHHHHhhh--hhcC----CeEEEeCCCH-HHhCCCC
Confidence 589999999999999999999998 7 9999999987665 332 2222 1111 2244555565 4588999
Q ss_pred EEEEccChhh----------------HHHHHHHhhhcCCCCCeEEEeccCCCcc
Q 014700 202 YCLHAMPVQF----------------SSSFLEGISDYVDPGLPFISLSKGLELN 239 (420)
Q Consensus 202 iVIlaVp~~~----------------l~~vl~~i~~~l~~~~iVVs~snGi~~~ 239 (420)
+||++++... ++++++.+.++ .++++|++++||++..
T Consensus 78 ~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~-~~~~~vi~~~Np~~~~ 130 (319)
T 1lld_A 78 MVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKV-APNAIYMLITNPVDIA 130 (319)
T ss_dssp EEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEECCSSHHHH
T ss_pred EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEecCchHHH
Confidence 9999996433 33778888775 6788999999998753
No 95
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=99.03 E-value=2.7e-10 Score=113.53 Aligned_cols=133 Identities=20% Similarity=0.233 Sum_probs=95.3
Q ss_pred ccCCccccchhhhchhcceeccccccccccchhhcCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHH
Q 014700 91 TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (420)
Q Consensus 91 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~ 170 (420)
++-...+|.++.|.|++ |.+. ...+.++. .++|||||+|.||..+|.+|...| ++|.+|+|++...+.. .
T Consensus 144 R~~~~~~~~~r~g~W~~---~~~~--~~~g~~l~--gktvGIIGlG~IG~~vA~~l~~~G--~~V~~~dr~~~~~~~~-~ 213 (345)
T 4g2n_A 144 RRGYEADRMVRSGSWPG---WGPT--QLLGMGLT--GRRLGIFGMGRIGRAIATRARGFG--LAIHYHNRTRLSHALE-E 213 (345)
T ss_dssp HTHHHHHHHHHTTCCCC---CCTT--TTCBCCCT--TCEEEEESCSHHHHHHHHHHHTTT--CEEEEECSSCCCHHHH-T
T ss_pred hCHHHHHHHHHcCCCcc---cCcc--cccccccC--CCEEEEEEeChhHHHHHHHHHHCC--CEEEEECCCCcchhhh-c
Confidence 66677889999998876 5531 11233444 689999999999999999999877 9999999975322211 1
Q ss_pred hcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEccCh-hhHHHHH-HHhhhcCCCCCeEEEeccCCCcchhhhHHHHH
Q 014700 171 KHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPV-QFSSSFL-EGISDYVDPGLPFISLSKGLELNTLRMMSQII 248 (420)
Q Consensus 171 ~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIlaVp~-~~l~~vl-~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l 248 (420)
+ +...+++++++++||+|++++|. ..++.++ ++....++++.++|+++.|-..++ +.+.+.+
T Consensus 214 -g--------------~~~~~~l~ell~~sDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde-~aL~~aL 277 (345)
T 4g2n_A 214 -G--------------AIYHDTLDSLLGASDIFLIAAPGRPELKGFLDHDRIAKIPEGAVVINISRGDLIND-DALIEAL 277 (345)
T ss_dssp -T--------------CEECSSHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHSCTTEEEEECSCGGGBCH-HHHHHHH
T ss_pred -C--------------CeEeCCHHHHHhhCCEEEEecCCCHHHHHHhCHHHHhhCCCCcEEEECCCCchhCH-HHHHHHH
Confidence 2 23345899999999999999994 4455555 445667889999999998865543 2333444
Q ss_pred H
Q 014700 249 P 249 (420)
Q Consensus 249 ~ 249 (420)
.
T Consensus 278 ~ 278 (345)
T 4g2n_A 278 R 278 (345)
T ss_dssp H
T ss_pred H
Confidence 3
No 96
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=99.03 E-value=2.1e-10 Score=113.64 Aligned_cols=134 Identities=14% Similarity=0.168 Sum_probs=96.2
Q ss_pred cccCCccccchhhhchhcceeccccccccccchhhcCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH
Q 014700 90 RTRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSIN 169 (420)
Q Consensus 90 ~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~ 169 (420)
.++-...+|.++.+.|.. |.+ ...+.++. .++|||||+|.||..+|..|...| ++|.+|+|++...+...
T Consensus 116 ~R~~~~~~~~~~~g~w~~---~~~---~~~~~~l~--g~tvGIIG~G~IG~~vA~~l~~~G--~~V~~~d~~~~~~~~~~ 185 (330)
T 4e5n_A 116 GRHLRAADAFVRSGKFRG---WQP---RFYGTGLD--NATVGFLGMGAIGLAMADRLQGWG--ATLQYHEAKALDTQTEQ 185 (330)
T ss_dssp HTTHHHHHHHHHTTCCCS---CCS---CCCCCCST--TCEEEEECCSHHHHHHHHHTTTSC--CEEEEECSSCCCHHHHH
T ss_pred HhChHHHHHHHHhCCccc---cCc---cccCCccC--CCEEEEEeeCHHHHHHHHHHHHCC--CEEEEECCCCCcHhHHH
Confidence 366677889999998875 764 22233444 789999999999999999998877 89999999863333333
Q ss_pred HhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEccChh-hHHHHH-HHhhhcCCCCCeEEEeccCCCcchhhhHHHH
Q 014700 170 EKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFL-EGISDYVDPGLPFISLSKGLELNTLRMMSQI 247 (420)
Q Consensus 170 ~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIlaVp~~-~l~~vl-~~i~~~l~~~~iVVs~snGi~~~t~~~~se~ 247 (420)
+.| +.. .+++++++.||+|++++|.. .++.++ ++....++++.++|+++.|-..++ ..+.+.
T Consensus 186 ~~g--------------~~~-~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~-~aL~~a 249 (330)
T 4e5n_A 186 RLG--------------LRQ-VACSELFASSDFILLALPLNADTLHLVNAELLALVRPGALLVNPCRGSVVDE-AAVLAA 249 (330)
T ss_dssp HHT--------------EEE-CCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGGBCH-HHHHHH
T ss_pred hcC--------------cee-CCHHHHHhhCCEEEEcCCCCHHHHHHhCHHHHhhCCCCcEEEECCCCchhCH-HHHHHH
Confidence 332 222 37889899999999999953 455555 356677899999999998855443 233444
Q ss_pred HH
Q 014700 248 IP 249 (420)
Q Consensus 248 l~ 249 (420)
+.
T Consensus 250 L~ 251 (330)
T 4e5n_A 250 LE 251 (330)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 97
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=99.02 E-value=2.2e-10 Score=113.71 Aligned_cols=129 Identities=16% Similarity=0.187 Sum_probs=92.6
Q ss_pred ccCCccccchhhhchhcceeccccccccccchhhcCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHH
Q 014700 91 TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (420)
Q Consensus 91 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~ 170 (420)
++-...++.++.+.|+.. . ...+.++. .++|+|||+|.||.++|..|...| ++|++|+|+++..+
T Consensus 137 R~~~~~~~~~~~g~w~~~----~---~~~~~~l~--g~~vgIIG~G~iG~~vA~~l~~~G--~~V~~~dr~~~~~~---- 201 (333)
T 3ba1_A 137 RRICECDKYVRRGAWKFG----D---FKLTTKFS--GKRVGIIGLGRIGLAVAERAEAFD--CPISYFSRSKKPNT---- 201 (333)
T ss_dssp TTHHHHHHHHHTTGGGGC----C---CCCCCCCT--TCCEEEECCSHHHHHHHHHHHTTT--CCEEEECSSCCTTC----
T ss_pred hCHHHHHHHHHcCCCCcc----c---cccccccC--CCEEEEECCCHHHHHHHHHHHHCC--CEEEEECCCchhcc----
Confidence 556677888888977531 0 11122333 679999999999999999999888 89999999864210
Q ss_pred hcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEccChh-hHHHHH-HHhhhcCCCCCeEEEeccCCCcchhhhHHHHH
Q 014700 171 KHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFL-EGISDYVDPGLPFISLSKGLELNTLRMMSQII 248 (420)
Q Consensus 171 ~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIlaVp~~-~l~~vl-~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l 248 (420)
++....++++++++||+|++++|.. .++.++ +++.+.+++++++|++++|...++ +.+.+.+
T Consensus 202 ---------------g~~~~~~l~ell~~aDvVil~vP~~~~t~~li~~~~l~~mk~gailIn~srG~~vd~-~aL~~aL 265 (333)
T 3ba1_A 202 ---------------NYTYYGSVVELASNSDILVVACPLTPETTHIINREVIDALGPKGVLINIGRGPHVDE-PELVSAL 265 (333)
T ss_dssp ---------------CSEEESCHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHHCTTCEEEECSCGGGBCH-HHHHHHH
T ss_pred ---------------CceecCCHHHHHhcCCEEEEecCCChHHHHHhhHHHHhcCCCCCEEEECCCCchhCH-HHHHHHH
Confidence 1234568889899999999999974 466666 345566788999999999876543 2344444
Q ss_pred HH
Q 014700 249 PQ 250 (420)
Q Consensus 249 ~~ 250 (420)
.+
T Consensus 266 ~~ 267 (333)
T 3ba1_A 266 VE 267 (333)
T ss_dssp HH
T ss_pred Hc
Confidence 43
No 98
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=99.00 E-value=5.1e-10 Score=110.43 Aligned_cols=135 Identities=12% Similarity=0.214 Sum_probs=94.1
Q ss_pred ccCCccccchhhhchhcceeccccccccccchhhcCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeC-CHHHHHHHH
Q 014700 91 TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMR-DPAVCQSIN 169 (420)
Q Consensus 91 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r-~~~~~~~i~ 169 (420)
++-...++.++.+.|++ |.+. ...+.++. .++|+|||+|.||..+|..|...| ++|++|+| +++.. ...
T Consensus 117 R~~~~~~~~~~~g~w~~---~~~~--~~~~~~l~--g~~vgIIG~G~IG~~~A~~l~~~G--~~V~~~d~~~~~~~-~~~ 186 (320)
T 1gdh_A 117 RRAGEGEKMIRTRSWPG---WEPL--ELVGEKLD--NKTLGIYGFGSIGQALAKRAQGFD--MDIDYFDTHRASSS-DEA 186 (320)
T ss_dssp TTHHHHHHHHHTTCCCC---CCTT--TTCBCCCT--TCEEEEECCSHHHHHHHHHHHTTT--CEEEEECSSCCCHH-HHH
T ss_pred ccHHHHHHHHHcCCCCc---cccc--cccCcCCC--CCEEEEECcCHHHHHHHHHHHHCC--CEEEEECCCCcChh-hhh
Confidence 56667888899998864 4421 11122333 689999999999999999999887 89999999 76542 223
Q ss_pred HhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEccChh-hHHHHH-HHhhhcCCCCCeEEEeccCCCcchhhhHHHH
Q 014700 170 EKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFL-EGISDYVDPGLPFISLSKGLELNTLRMMSQI 247 (420)
Q Consensus 170 ~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIlaVp~~-~l~~vl-~~i~~~l~~~~iVVs~snGi~~~t~~~~se~ 247 (420)
+.| +...+++++++++||+|++++|.. .++.++ ++..+.+++++++|+++.|-..+. ..+.+.
T Consensus 187 ~~g--------------~~~~~~l~ell~~aDvVil~~p~~~~t~~~i~~~~l~~mk~gailIn~arg~~vd~-~aL~~a 251 (320)
T 1gdh_A 187 SYQ--------------ATFHDSLDSLLSVSQFFSLNAPSTPETRYFFNKATIKSLPQGAIVVNTARGDLVDN-ELVVAA 251 (320)
T ss_dssp HHT--------------CEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCH-HHHHHH
T ss_pred hcC--------------cEEcCCHHHHHhhCCEEEEeccCchHHHhhcCHHHHhhCCCCcEEEECCCCcccCH-HHHHHH
Confidence 322 233347888889999999999964 455555 345677889999999988743332 233444
Q ss_pred HHH
Q 014700 248 IPQ 250 (420)
Q Consensus 248 l~~ 250 (420)
+.+
T Consensus 252 L~~ 254 (320)
T 1gdh_A 252 LEA 254 (320)
T ss_dssp HHH
T ss_pred HHh
Confidence 443
No 99
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=99.00 E-value=2.6e-10 Score=113.15 Aligned_cols=123 Identities=18% Similarity=0.258 Sum_probs=89.8
Q ss_pred ccCCccccchhhhchhcceecccccccccc----chhhcCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHH
Q 014700 91 TRDGRDRRKIVKVAWEKLVRWSRTWRSKAK----TDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQ 166 (420)
Q Consensus 91 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~ 166 (420)
++-...++.++.+.|++ |.. ...+ .++. .++|+|||+|.||.++|..|...| ++|++|+|+++. +
T Consensus 114 R~~~~~~~~~~~g~w~~---~~~---~~~~~~~~~~l~--g~~vgIIG~G~iG~~vA~~l~~~G--~~V~~~d~~~~~-~ 182 (333)
T 2d0i_A 114 RKIHYADKFIRRGEWES---HAK---IWTGFKRIESLY--GKKVGILGMGAIGKAIARRLIPFG--VKLYYWSRHRKV-N 182 (333)
T ss_dssp HCHHHHHHHHHTTCCCC---HHH---HHTTSCCCCCST--TCEEEEECCSHHHHHHHHHHGGGT--CEEEEECSSCCH-H
T ss_pred hHHHHHHHHHHcCCCCc---Ccc---cccCCcccCCCC--cCEEEEEccCHHHHHHHHHHHHCC--CEEEEECCCcch-h
Confidence 56667788889998854 321 0111 2333 689999999999999999999888 899999998765 3
Q ss_pred HHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEccChh-hHHHHHH-HhhhcCCCCCeEEEeccCCCcch
Q 014700 167 SINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFLE-GISDYVDPGLPFISLSKGLELNT 240 (420)
Q Consensus 167 ~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIlaVp~~-~l~~vl~-~i~~~l~~~~iVVs~snGi~~~t 240 (420)
...+.+ +.. .++++++++||+|++++|.. .++.++. ++.+.++++ ++|++++|...++
T Consensus 183 ~~~~~g--------------~~~-~~l~e~l~~aDiVil~vp~~~~t~~~i~~~~~~~mk~g-ilin~srg~~vd~ 242 (333)
T 2d0i_A 183 VEKELK--------------ARY-MDIDELLEKSDIVILALPLTRDTYHIINEERVKKLEGK-YLVNIGRGALVDE 242 (333)
T ss_dssp HHHHHT--------------EEE-CCHHHHHHHCSEEEECCCCCTTTTTSBCHHHHHHTBTC-EEEECSCGGGBCH
T ss_pred hhhhcC--------------cee-cCHHHHHhhCCEEEEcCCCChHHHHHhCHHHHhhCCCC-EEEECCCCcccCH
Confidence 333322 233 37888889999999999976 5666653 455678889 9999998866543
No 100
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=98.99 E-value=4.7e-10 Score=112.07 Aligned_cols=134 Identities=12% Similarity=0.161 Sum_probs=94.8
Q ss_pred ccCCccccchhhhchhcceeccccccccccchhhcCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHH
Q 014700 91 TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (420)
Q Consensus 91 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~ 170 (420)
++-.+.++.++.|.|+.. . ......++. .|+|+|||+|.||..+|..|...| ++|.+|+|++...+...+
T Consensus 136 R~~~~~~~~~~~g~W~~~---~---~~~~~~~l~--gktvGIIG~G~IG~~vA~~l~~~G--~~V~~~dr~~~~~~~~~~ 205 (351)
T 3jtm_A 136 RNFVPGYNQVVKGEWNVA---G---IAYRAYDLE--GKTIGTVGAGRIGKLLLQRLKPFG--CNLLYHDRLQMAPELEKE 205 (351)
T ss_dssp HTHHHHHHHHHTTCCCHH---H---HHTTCCCST--TCEEEEECCSHHHHHHHHHHGGGC--CEEEEECSSCCCHHHHHH
T ss_pred hCcHHHHHHHHcCCCccc---c---ccCCccccc--CCEEeEEEeCHHHHHHHHHHHHCC--CEEEEeCCCccCHHHHHh
Confidence 556677888888877642 0 011122333 689999999999999999999888 899999997644444444
Q ss_pred hcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEccCh-hhHHHHH-HHhhhcCCCCCeEEEeccCCCcchhhhHHHHH
Q 014700 171 KHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPV-QFSSSFL-EGISDYVDPGLPFISLSKGLELNTLRMMSQII 248 (420)
Q Consensus 171 ~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIlaVp~-~~l~~vl-~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l 248 (420)
.| +...++++++++.||+|++++|. ..++.++ ++....++++.++|+++.|-..++ +.+.+.+
T Consensus 206 ~g--------------~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde-~aL~~aL 270 (351)
T 3jtm_A 206 TG--------------AKFVEDLNEMLPKCDVIVINMPLTEKTRGMFNKELIGKLKKGVLIVNNARGAIMER-QAVVDAV 270 (351)
T ss_dssp HC--------------CEECSCHHHHGGGCSEEEECSCCCTTTTTCBSHHHHHHSCTTEEEEECSCGGGBCH-HHHHHHH
T ss_pred CC--------------CeEcCCHHHHHhcCCEEEECCCCCHHHHHhhcHHHHhcCCCCCEEEECcCchhhCH-HHHHHHH
Confidence 33 23445899999999999999995 3455554 455667889999999998865543 2334444
Q ss_pred H
Q 014700 249 P 249 (420)
Q Consensus 249 ~ 249 (420)
.
T Consensus 271 ~ 271 (351)
T 3jtm_A 271 E 271 (351)
T ss_dssp H
T ss_pred H
Confidence 4
No 101
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=98.97 E-value=1.1e-09 Score=107.76 Aligned_cols=106 Identities=23% Similarity=0.329 Sum_probs=78.2
Q ss_pred hcCCCeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHHh--cCCCCCCCCCCCCCceEEeCCHHHhccCC
Q 014700 124 LERTNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEK--HCNCRYFPEQKLPENVIATTDAKTALLGA 200 (420)
Q Consensus 124 ~~~~mkI~IIGaGamG~alA~~La~aG~~~-~V~l~~r~~~~~~~i~~~--g~~~~~l~~~~l~~~i~a~td~~eal~~a 200 (420)
|...|||+|||+|.||+++|..|+.+| + +|++||++++.++..... +.. .+ ...+..+..++|. +++++|
T Consensus 1 M~~~~kI~VIGaG~~G~~ia~~la~~g--~~~V~l~D~~~~~~~~~~~~l~~~~-~~---~~~~~~i~~t~d~-~a~~~a 73 (317)
T 2ewd_A 1 MIERRKIAVIGSGQIGGNIAYIVGKDN--LADVVLFDIAEGIPQGKALDITHSM-VM---FGSTSKVIGTDDY-ADISGS 73 (317)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHHT--CCEEEEECSSSSHHHHHHHHHHHHH-HH---HTCCCCEEEESCG-GGGTTC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCC--CceEEEEeCCchHHHHHHHHHHhhh-hh---cCCCcEEEECCCH-HHhCCC
Confidence 344689999999999999999999998 7 999999998766543110 100 00 0113356777788 678999
Q ss_pred cEEEEcc--------------C--hhhHHHHHHHhhhcCCCCCeEEEeccCCC
Q 014700 201 DYCLHAM--------------P--VQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (420)
Q Consensus 201 DiVIlaV--------------p--~~~l~~vl~~i~~~l~~~~iVVs~snGi~ 237 (420)
|+||+++ + ...++++++++.++. ++++++..+|+..
T Consensus 74 DiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~-~~~iii~~sNp~~ 125 (317)
T 2ewd_A 74 DVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYC-PNAFVICITNPLD 125 (317)
T ss_dssp SEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECCSSHH
T ss_pred CEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHC-CCcEEEEeCChHH
Confidence 9999999 3 234788888988875 5888988998643
No 102
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=98.97 E-value=3.8e-10 Score=109.90 Aligned_cols=126 Identities=11% Similarity=0.146 Sum_probs=92.1
Q ss_pred ccCCccccchhhhchhcceeccccccccccchhhcCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHH
Q 014700 91 TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (420)
Q Consensus 91 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~ 170 (420)
++-...++.++.+.|++. .| .++. .++|+|||+|.||..+|..|...| ++|++|+|+++..+
T Consensus 98 R~~~~~~~~~~~g~w~~~-~~---------~~l~--g~tvGIIGlG~IG~~vA~~l~~~G--~~V~~~dr~~~~~~---- 159 (290)
T 3gvx_A 98 KNILENNELMKAGIFRQS-PT---------TLLY--GKALGILGYGGIGRRVAHLAKAFG--MRVIAYTRSSVDQN---- 159 (290)
T ss_dssp TTHHHHHHHHHTTCCCCC-CC---------CCCT--TCEEEEECCSHHHHHHHHHHHHHT--CEEEEECSSCCCTT----
T ss_pred HhhhhhhhHhhhcccccC-Cc---------eeee--cchheeeccCchhHHHHHHHHhhC--cEEEEEeccccccc----
Confidence 566677888888877652 11 1222 689999999999999999999988 99999999764211
Q ss_pred hcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEccCh-hhHHHHH-HHhhhcCCCCCeEEEeccCCCcchhhhHHHHH
Q 014700 171 KHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPV-QFSSSFL-EGISDYVDPGLPFISLSKGLELNTLRMMSQII 248 (420)
Q Consensus 171 ~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIlaVp~-~~l~~vl-~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l 248 (420)
.+...+++++++++||+|++++|. ..++.++ ++..+.+++++++|++++|-..++ +.+.+.+
T Consensus 160 ---------------~~~~~~~l~ell~~aDiV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRG~~vd~-~aL~~aL 223 (290)
T 3gvx_A 160 ---------------VDVISESPADLFRQSDFVLIAIPLTDKTRGMVNSRLLANARKNLTIVNVARADVVSK-PDMIGFL 223 (290)
T ss_dssp ---------------CSEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTCCTTCEEEECSCGGGBCH-HHHHHHH
T ss_pred ---------------cccccCChHHHhhccCeEEEEeeccccchhhhhHHHHhhhhcCceEEEeehhcccCC-cchhhhh
Confidence 023445889999999999999994 4555555 456677899999999998765543 3344444
Q ss_pred HH
Q 014700 249 PQ 250 (420)
Q Consensus 249 ~~ 250 (420)
.+
T Consensus 224 ~~ 225 (290)
T 3gvx_A 224 KE 225 (290)
T ss_dssp HH
T ss_pred hh
Confidence 43
No 103
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=98.97 E-value=5.5e-10 Score=111.06 Aligned_cols=121 Identities=15% Similarity=0.178 Sum_probs=81.7
Q ss_pred cccCCccccchhhhchhcceeccccccccccchhhcCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH
Q 014700 90 RTRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSIN 169 (420)
Q Consensus 90 ~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~ 169 (420)
.|+-...+|.++.|.|++ |.. ...+.++. .|+|||||+|.||.++|.+|...| ++|.+|+|+++.
T Consensus 142 ~R~~~~~~~~~~~g~W~~---~~~---~~~~~~l~--gktiGIIGlG~IG~~vA~~l~~~G--~~V~~~dr~~~~----- 206 (340)
T 4dgs_A 142 LRRVGDGDRLVREGRWAA---GEQ---LPLGHSPK--GKRIGVLGLGQIGRALASRAEAFG--MSVRYWNRSTLS----- 206 (340)
T ss_dssp HTTHHHHHHHHHTTCC------------CCCCCCT--TCEEEEECCSHHHHHHHHHHHTTT--CEEEEECSSCCT-----
T ss_pred HhChHHHHHHHhcCCccc---ccC---cCcccccc--CCEEEEECCCHHHHHHHHHHHHCC--CEEEEEcCCccc-----
Confidence 366677889999998875 210 01123344 689999999999999999999887 899999997642
Q ss_pred HhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEccCh-hhHHHHH-HHhhhcCCCCCeEEEeccCCCcc
Q 014700 170 EKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPV-QFSSSFL-EGISDYVDPGLPFISLSKGLELN 239 (420)
Q Consensus 170 ~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIlaVp~-~~l~~vl-~~i~~~l~~~~iVVs~snGi~~~ 239 (420)
.. ......++++++++||+|++++|. ..++.++ ++..+.+++++++|+++.|-..+
T Consensus 207 ~~--------------~~~~~~sl~ell~~aDvVil~vP~t~~t~~li~~~~l~~mk~gailIN~aRG~vvd 264 (340)
T 4dgs_A 207 GV--------------DWIAHQSPVDLARDSDVLAVCVAASAATQNIVDASLLQALGPEGIVVNVARGNVVD 264 (340)
T ss_dssp TS--------------CCEECSSHHHHHHTCSEEEECC----------CHHHHHHTTTTCEEEECSCC----
T ss_pred cc--------------CceecCCHHHHHhcCCEEEEeCCCCHHHHHHhhHHHHhcCCCCCEEEECCCCcccC
Confidence 00 123345899999999999999994 5577776 56677789999999999985544
No 104
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=98.94 E-value=1.8e-09 Score=107.16 Aligned_cols=131 Identities=11% Similarity=0.127 Sum_probs=92.6
Q ss_pred ccCCccccchhhhchhcceeccccccccccchhhcCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHH
Q 014700 91 TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (420)
Q Consensus 91 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~ 170 (420)
|+-...++.++.+.|++. ...+.++. .++|+|||+|.||..+|..|...| ++|++|+|+.+. +...+
T Consensus 139 R~~~~~~~~~~~g~W~~~--------~~~~~~l~--g~tvgIIGlG~IG~~vA~~l~~~G--~~V~~~d~~~~~-~~~~~ 205 (335)
T 2g76_A 139 RQIPQATASMKDGKWERK--------KFMGTELN--GKTLGILGLGRIGREVATRMQSFG--MKTIGYDPIISP-EVSAS 205 (335)
T ss_dssp HTHHHHHHHHHTTCCCTG--------GGCBCCCT--TCEEEEECCSHHHHHHHHHHHTTT--CEEEEECSSSCH-HHHHH
T ss_pred hchHHHHHHHHcCCCCcc--------CCCCcCCC--cCEEEEEeECHHHHHHHHHHHHCC--CEEEEECCCcch-hhhhh
Confidence 556677888888877541 11122333 679999999999999999999877 999999997654 22333
Q ss_pred hcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEccChh-hHHHHH-HHhhhcCCCCCeEEEeccCCCcchhhhHHHHH
Q 014700 171 KHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFL-EGISDYVDPGLPFISLSKGLELNTLRMMSQII 248 (420)
Q Consensus 171 ~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIlaVp~~-~l~~vl-~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l 248 (420)
.| +.. .++++++++||+|++++|.. .++.++ ++....++++.++|+++.|-..++ ..+.+.+
T Consensus 206 ~g--------------~~~-~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~vvd~-~aL~~aL 269 (335)
T 2g76_A 206 FG--------------VQQ-LPLEEIWPLCDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGIVDE-GALLRAL 269 (335)
T ss_dssp TT--------------CEE-CCHHHHGGGCSEEEECCCCCTTTTTSBCHHHHTTSCTTEEEEECSCTTSBCH-HHHHHHH
T ss_pred cC--------------cee-CCHHHHHhcCCEEEEecCCCHHHHHhhCHHHHhhCCCCcEEEECCCccccCH-HHHHHHH
Confidence 22 122 37889999999999999965 466655 456677899999999998754442 2334444
Q ss_pred HH
Q 014700 249 PQ 250 (420)
Q Consensus 249 ~~ 250 (420)
.+
T Consensus 270 ~~ 271 (335)
T 2g76_A 270 QS 271 (335)
T ss_dssp HH
T ss_pred Hh
Confidence 43
No 105
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=98.93 E-value=1.1e-09 Score=115.28 Aligned_cols=121 Identities=16% Similarity=0.196 Sum_probs=91.0
Q ss_pred ccCCccccchhhhchhcceeccccccccccchhhcCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHH
Q 014700 91 TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (420)
Q Consensus 91 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~ 170 (420)
|+-...++.++.|.|++. ...+.++. .++|+|||+|.||.++|..|...| ++|++|+++... +...+
T Consensus 116 R~~~~~~~~~~~g~w~~~--------~~~~~~l~--g~~vgIIG~G~IG~~vA~~l~~~G--~~V~~~d~~~~~-~~a~~ 182 (529)
T 1ygy_A 116 RQIPAADASLREHTWKRS--------SFSGTEIF--GKTVGVVGLGRIGQLVAQRIAAFG--AYVVAYDPYVSP-ARAAQ 182 (529)
T ss_dssp TTHHHHHHHHHTTCCCGG--------GCCBCCCT--TCEEEEECCSHHHHHHHHHHHTTT--CEEEEECTTSCH-HHHHH
T ss_pred hhhHHHHHHHHhCCCccc--------CcCccccC--CCEEEEEeeCHHHHHHHHHHHhCC--CEEEEECCCCCh-hHHHh
Confidence 556677888888877642 11222333 689999999999999999999988 899999987642 23333
Q ss_pred hcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEccChh-hHHHHHHH-hhhcCCCCCeEEEeccCCCcc
Q 014700 171 KHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFLEG-ISDYVDPGLPFISLSKGLELN 239 (420)
Q Consensus 171 ~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIlaVp~~-~l~~vl~~-i~~~l~~~~iVVs~snGi~~~ 239 (420)
.| +... ++++++++||+|++|+|.. .++.++.+ +.+.+++++++|++++|-..+
T Consensus 183 ~g--------------~~~~-~l~e~~~~aDvV~l~~P~~~~t~~~i~~~~~~~~k~g~ilin~arg~iv~ 238 (529)
T 1ygy_A 183 LG--------------IELL-SLDDLLARADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGLVD 238 (529)
T ss_dssp HT--------------CEEC-CHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCTTSBC
T ss_pred cC--------------cEEc-CHHHHHhcCCEEEECCCCchHHHHHhCHHHHhCCCCCCEEEECCCCchhh
Confidence 33 1222 7888899999999999976 67777754 677789999999999886554
No 106
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=98.92 E-value=1.5e-09 Score=106.50 Aligned_cols=131 Identities=15% Similarity=0.198 Sum_probs=91.4
Q ss_pred ccCCccccchhhhchhcceeccccccccccchhhcCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHH
Q 014700 91 TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (420)
Q Consensus 91 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~ 170 (420)
++-...++.++.+.|++. ...+.++. .++|+|||+|.||..+|..|...| ++|++|+|+++. +...+
T Consensus 116 R~~~~~~~~~~~g~w~~~--------~~~~~~l~--g~~vgIiG~G~IG~~~A~~l~~~G--~~V~~~d~~~~~-~~~~~ 182 (307)
T 1wwk_A 116 RKIAFADRKMREGVWAKK--------EAMGIELE--GKTIGIIGFGRIGYQVAKIANALG--MNILLYDPYPNE-ERAKE 182 (307)
T ss_dssp TTHHHHHHHHTTTCCCTT--------TCCBCCCT--TCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSCCH-HHHHH
T ss_pred hCHHHHHHHHHcCCCCcc--------CcCCcccC--CceEEEEccCHHHHHHHHHHHHCC--CEEEEECCCCCh-hhHhh
Confidence 556677888888877541 01122333 679999999999999999999888 899999998765 33333
Q ss_pred hcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEccChhh-HHHHH-HHhhhcCCCCCeEEEeccCCCcchhhhHHHHH
Q 014700 171 KHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQF-SSSFL-EGISDYVDPGLPFISLSKGLELNTLRMMSQII 248 (420)
Q Consensus 171 ~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIlaVp~~~-l~~vl-~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l 248 (420)
.| +.. .++++++++||+|++++|... ++.++ ++..+.+++++++|+++.|-..++ ..+.+.+
T Consensus 183 ~g--------------~~~-~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~arg~~vd~-~aL~~aL 246 (307)
T 1wwk_A 183 VN--------------GKF-VDLETLLKESDVVTIHVPLVESTYHLINEERLKLMKKTAILINTSRGPVVDT-NALVKAL 246 (307)
T ss_dssp TT--------------CEE-CCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCH-HHHHHHH
T ss_pred cC--------------ccc-cCHHHHHhhCCEEEEecCCChHHhhhcCHHHHhcCCCCeEEEECCCCcccCH-HHHHHHH
Confidence 22 122 268888899999999999643 55555 345567889999999988744332 2344445
Q ss_pred HH
Q 014700 249 PQ 250 (420)
Q Consensus 249 ~~ 250 (420)
.+
T Consensus 247 ~~ 248 (307)
T 1wwk_A 247 KE 248 (307)
T ss_dssp HH
T ss_pred Hh
Confidence 43
No 107
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=98.92 E-value=1.2e-09 Score=110.50 Aligned_cols=125 Identities=11% Similarity=0.068 Sum_probs=89.0
Q ss_pred ccCCccccchhhhchhcceeccccccccccchhhcCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHH
Q 014700 91 TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (420)
Q Consensus 91 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~ 170 (420)
|+-...++.++.+.|+.. +. .....++. .++|+|||+|.||..+|..|...| ++|++|+|+++..+...+
T Consensus 163 R~~~~~~~~~~~g~W~~~--~~----~~~~~~l~--gktvGIIGlG~IG~~vA~~l~a~G--~~V~~~d~~~~~~~~~~~ 232 (393)
T 2nac_A 163 RNYLPSHEWARKGGWNIA--DC----VSHAYDLE--AMHVGTVAAGRIGLAVLRRLAPFD--VHLHYTDRHRLPESVEKE 232 (393)
T ss_dssp TTHHHHHHHHHTTCCCHH--HH----HTTCCCCT--TCEEEEECCSHHHHHHHHHHGGGT--CEEEEECSSCCCHHHHHH
T ss_pred hccHHHHHHHHcCCCCcc--cc----ccCCccCC--CCEEEEEeECHHHHHHHHHHHhCC--CEEEEEcCCccchhhHhh
Confidence 444567778888877541 11 11122333 689999999999999999999887 899999987543333333
Q ss_pred hcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEccChh-hHHHHH-HHhhhcCCCCCeEEEeccCCCcc
Q 014700 171 KHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFL-EGISDYVDPGLPFISLSKGLELN 239 (420)
Q Consensus 171 ~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIlaVp~~-~l~~vl-~~i~~~l~~~~iVVs~snGi~~~ 239 (420)
.| +....+++++++.||+|++++|.. .++.++ ++....++++.++|+++.|-..+
T Consensus 233 ~G--------------~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vd 289 (393)
T 2nac_A 233 LN--------------LTWHATREDMYPVCDVVTLNCPLHPETEHMINDETLKLFKRGAYIVNTARGKLCD 289 (393)
T ss_dssp HT--------------CEECSSHHHHGGGCSEEEECSCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBC
T ss_pred cC--------------ceecCCHHHHHhcCCEEEEecCCchHHHHHhhHHHHhhCCCCCEEEECCCchHhh
Confidence 33 233347889999999999999953 456666 45667788999999999875443
No 108
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=98.91 E-value=2.6e-10 Score=112.36 Aligned_cols=128 Identities=12% Similarity=0.190 Sum_probs=90.5
Q ss_pred ccCCccccchhhhchhcceeccccccccccchhhcCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHH
Q 014700 91 TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (420)
Q Consensus 91 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~ 170 (420)
++-...+|.++.+.|++. ...++. .|+|||||+|.||..+|..|...| ++|++|+|+++..+
T Consensus 115 R~~~~~~~~~~~g~W~~~----------~~~~l~--g~tvGIiG~G~IG~~vA~~l~~~G--~~V~~~dr~~~~~~---- 176 (315)
T 3pp8_A 115 RRFDDYQALKNQALWKPL----------PEYTRE--EFSVGIMGAGVLGAKVAESLQAWG--FPLRCWSRSRKSWP---- 176 (315)
T ss_dssp TTHHHHHHHHHTTCCCCC----------CCCCST--TCCEEEECCSHHHHHHHHHHHTTT--CCEEEEESSCCCCT----
T ss_pred hCChHHHHHHHhcccCCC----------CCCCcC--CCEEEEEeeCHHHHHHHHHHHHCC--CEEEEEcCCchhhh----
Confidence 555667788888877652 111233 689999999999999999999887 99999999764211
Q ss_pred hcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEccCh-hhHHHHH-HHhhhcCCCCCeEEEeccCCCcchhhhHHHHH
Q 014700 171 KHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPV-QFSSSFL-EGISDYVDPGLPFISLSKGLELNTLRMMSQII 248 (420)
Q Consensus 171 ~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIlaVp~-~~l~~vl-~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l 248 (420)
+. . ......++++++++||+|++++|. ..++.++ ++....+++++++|+++.|-..++ +.+.+.+
T Consensus 177 -~~--~---------~~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~-~aL~~aL 243 (315)
T 3pp8_A 177 -GV--E---------SYVGREELRAFLNQTRVLINLLPNTAQTVGIINSELLDQLPDGAYVLNLARGVHVQE-ADLLAAL 243 (315)
T ss_dssp -TC--E---------EEESHHHHHHHHHTCSEEEECCCCCGGGTTCBSHHHHTTSCTTEEEEECSCGGGBCH-HHHHHHH
T ss_pred -hh--h---------hhcccCCHHHHHhhCCEEEEecCCchhhhhhccHHHHhhCCCCCEEEECCCChhhhH-HHHHHHH
Confidence 10 0 001124788899999999999994 4566666 556677899999999999865543 2333444
Q ss_pred H
Q 014700 249 P 249 (420)
Q Consensus 249 ~ 249 (420)
.
T Consensus 244 ~ 244 (315)
T 3pp8_A 244 D 244 (315)
T ss_dssp H
T ss_pred H
Confidence 3
No 109
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=98.90 E-value=4.1e-10 Score=111.31 Aligned_cols=120 Identities=13% Similarity=0.241 Sum_probs=84.9
Q ss_pred ccCCcc-ccchhhhchhcceeccccccccccchhhcCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH
Q 014700 91 TRDGRD-RRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSIN 169 (420)
Q Consensus 91 ~~~~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~ 169 (420)
++-... +|.++.+.|++. . ...++. .++|||||+|.||..+|..|...| ++|++|+|+++..+.+
T Consensus 111 R~~~~~~~~~~~~~~W~~~------~---~~~~l~--gktvGIiGlG~IG~~vA~~l~~~G--~~V~~~dr~~~~~~~~- 176 (324)
T 3evt_A 111 RGYHAAWLNQRGARQWALP------M---TTSTLT--GQQLLIYGTGQIGQSLAAKASALG--MHVIGVNTTGHPADHF- 176 (324)
T ss_dssp TTHHHHHHHHTTTCCSSCS------S---CCCCST--TCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSCCCCTTC-
T ss_pred hChhHHHHHHHhcCCcccC------C---CCcccc--CCeEEEECcCHHHHHHHHHHHhCC--CEEEEECCCcchhHhH-
Confidence 444445 677777766542 1 122333 679999999999999999999887 9999999976421110
Q ss_pred HhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEccCh-hhHHHHH-HHhhhcCCCCCeEEEeccCCCcc
Q 014700 170 EKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPV-QFSSSFL-EGISDYVDPGLPFISLSKGLELN 239 (420)
Q Consensus 170 ~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIlaVp~-~~l~~vl-~~i~~~l~~~~iVVs~snGi~~~ 239 (420)
.......++++++++||+|++++|. ..++.++ ++....++++.++|+++.|-..+
T Consensus 177 ---------------~~~~~~~~l~ell~~aDvV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vd 233 (324)
T 3evt_A 177 ---------------HETVAFTATADALATANFIVNALPLTPTTHHLFSTELFQQTKQQPMLINIGRGPAVD 233 (324)
T ss_dssp ---------------SEEEEGGGCHHHHHHCSEEEECCCCCGGGTTCBSHHHHHTCCSCCEEEECSCGGGBC
T ss_pred ---------------hhccccCCHHHHHhhCCEEEEcCCCchHHHHhcCHHHHhcCCCCCEEEEcCCChhhh
Confidence 0112234778889999999999994 4455555 45566788999999999886554
No 110
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=98.89 E-value=1.8e-09 Score=108.46 Aligned_cols=135 Identities=11% Similarity=0.141 Sum_probs=93.5
Q ss_pred ccCCccccchhhhchhcceeccccccccccchhhcCCCeEEEEcccHHHHHHHHHHHhcCCCCe-EEEEeCCHHHHHHHH
Q 014700 91 TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLK-VYMLMRDPAVCQSIN 169 (420)
Q Consensus 91 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~aG~~~~-V~l~~r~~~~~~~i~ 169 (420)
++-...++.++.+.|+.. .+ .....++. .++|+|||+|.||..+|..|...| ++ |++|+|++...+...
T Consensus 136 R~~~~~~~~~~~g~W~~~-~~-----~~~~~~l~--g~tvgIIG~G~IG~~vA~~l~~~G--~~~V~~~d~~~~~~~~~~ 205 (364)
T 2j6i_A 136 RNFVPAHEQIINHDWEVA-AI-----AKDAYDIE--GKTIATIGAGRIGYRVLERLVPFN--PKELLYYDYQALPKDAEE 205 (364)
T ss_dssp TTHHHHHHHHHTTCCCHH-HH-----HTTCCCST--TCEEEEECCSHHHHHHHHHHGGGC--CSEEEEECSSCCCHHHHH
T ss_pred hChHHHHHHHHhCCCCcC-cc-----cCCcccCC--CCEEEEECcCHHHHHHHHHHHhCC--CcEEEEECCCccchhHHH
Confidence 555667888888877531 00 11122333 689999999999999999999887 87 999998764444333
Q ss_pred HhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEccChh-hHHHHH-HHhhhcCCCCCeEEEeccCCCcchhhhHHHH
Q 014700 170 EKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFL-EGISDYVDPGLPFISLSKGLELNTLRMMSQI 247 (420)
Q Consensus 170 ~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIlaVp~~-~l~~vl-~~i~~~l~~~~iVVs~snGi~~~t~~~~se~ 247 (420)
+.| +....+++++++.||+|++++|.. .++.++ ++..+.++++.++|+++.|-..++ +.+.+.
T Consensus 206 ~~g--------------~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIn~arG~~vd~-~aL~~a 270 (364)
T 2j6i_A 206 KVG--------------ARRVENIEELVAQADIVTVNAPLHAGTKGLINKELLSKFKKGAWLVNTARGAICVA-EDVAAA 270 (364)
T ss_dssp HTT--------------EEECSSHHHHHHTCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGGBCH-HHHHHH
T ss_pred hcC--------------cEecCCHHHHHhcCCEEEECCCCChHHHHHhCHHHHhhCCCCCEEEECCCCchhCH-HHHHHH
Confidence 332 233457889899999999999964 455555 345677889999999998754443 234444
Q ss_pred HHH
Q 014700 248 IPQ 250 (420)
Q Consensus 248 l~~ 250 (420)
+.+
T Consensus 271 L~~ 273 (364)
T 2j6i_A 271 LES 273 (364)
T ss_dssp HHH
T ss_pred HHc
Confidence 443
No 111
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=98.89 E-value=3.9e-09 Score=104.53 Aligned_cols=103 Identities=21% Similarity=0.242 Sum_probs=77.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHH--hcCCCCCCCCCCCCCceEEeCCHHHhccCCcEE
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINE--KHCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~-~V~l~~r~~~~~~~i~~--~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiV 203 (420)
.|||+|||+|.||+++|..|+.+| + +|.+||++++.++.... .+.. .++ ..+.++..++|+++++++||+|
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g--~~~V~L~D~~~~~~~~~~~~l~~~~-~~~---~~~~~i~~t~d~~ea~~~aDiV 82 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRE--LADVVLYDVVKGMPEGKALDLSHVT-SVV---DTNVSVRAEYSYEAALTGADCV 82 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHT--CCEEEEECSSSSHHHHHHHHHHHHH-HHT---TCCCCEEEECSHHHHHTTCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CCeEEEEECChhHHHHHHHHHHhhh-hcc---CCCCEEEEeCCHHHHhCCCCEE
Confidence 479999999999999999999998 6 89999999876655211 1111 111 1345678889998889999999
Q ss_pred EEcc--Chh-------------------hHHHHHHHhhhcCCCCCeEEEeccCC
Q 014700 204 LHAM--PVQ-------------------FSSSFLEGISDYVDPGLPFISLSKGL 236 (420)
Q Consensus 204 IlaV--p~~-------------------~l~~vl~~i~~~l~~~~iVVs~snGi 236 (420)
|+++ |.. .++++++++.++. ++.+++..+|..
T Consensus 83 i~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~tNP~ 135 (331)
T 1pzg_A 83 IVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYC-PKTFIIVVTNPL 135 (331)
T ss_dssp EECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSH
T ss_pred EEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEEcCch
Confidence 9998 521 2677778888775 678887778744
No 112
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=98.89 E-value=1.2e-09 Score=108.91 Aligned_cols=125 Identities=11% Similarity=0.135 Sum_probs=88.8
Q ss_pred ccCCccccchhhhc---hhcceeccccccccccchhhcCCCeEEEEcccHHHHHHHHHHH-hcCCCCeEEEEeCCHHHHH
Q 014700 91 TRDGRDRRKIVKVA---WEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVA-NKKSQLKVYMLMRDPAVCQ 166 (420)
Q Consensus 91 ~~~~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La-~aG~~~~V~l~~r~~~~~~ 166 (420)
++-...+|.++.|. |++. |.+ ....+.++. .++|+|||+|.||..+|..|. ..| ++|++|+|+++..+
T Consensus 130 R~~~~~~~~~~~g~~~~w~~~--~~~--~~~~~~~l~--g~~vgIIG~G~IG~~vA~~l~~~~G--~~V~~~d~~~~~~~ 201 (348)
T 2w2k_A 130 RLASYSERAARTGDPETFNRV--HLE--IGKSAHNPR--GHVLGAVGLGAIQKEIARKAVHGLG--MKLVYYDVAPADAE 201 (348)
T ss_dssp HTHHHHHHHHTTCCHHHHHHH--HHH--HHTTCCCST--TCEEEEECCSHHHHHHHHHHHHTTC--CEEEEECSSCCCHH
T ss_pred hChHHHHHHHHcCCCcccccc--ccc--ccccCcCCC--CCEEEEEEECHHHHHHHHHHHHhcC--CEEEEECCCCcchh
Confidence 66667788888887 7431 110 001122333 679999999999999999998 877 89999999865444
Q ss_pred HHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEccChh-hHHHHH-HHhhhcCCCCCeEEEeccCCC
Q 014700 167 SINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFL-EGISDYVDPGLPFISLSKGLE 237 (420)
Q Consensus 167 ~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIlaVp~~-~l~~vl-~~i~~~l~~~~iVVs~snGi~ 237 (420)
...+.+ +...+++++++++||+|++++|.. .++.++ +++.+.+++++++|+++.|-.
T Consensus 202 ~~~~~g--------------~~~~~~l~ell~~aDvVil~vp~~~~t~~li~~~~l~~mk~gailin~srg~~ 260 (348)
T 2w2k_A 202 TEKALG--------------AERVDSLEELARRSDCVSVSVPYMKLTHHLIDEAFFAAMKPGSRIVNTARGPV 260 (348)
T ss_dssp HHHHHT--------------CEECSSHHHHHHHCSEEEECCCCSGGGTTCBCHHHHHHSCTTEEEEECSCGGG
T ss_pred hHhhcC--------------cEEeCCHHHHhccCCEEEEeCCCChHHHHHhhHHHHhcCCCCCEEEECCCCch
Confidence 443322 233357888889999999999964 355555 345567889999999988743
No 113
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=98.88 E-value=2.3e-09 Score=106.35 Aligned_cols=121 Identities=17% Similarity=0.165 Sum_probs=88.1
Q ss_pred ccCCccccchhhhchhcceeccccccccccchhhcCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHH
Q 014700 91 TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (420)
Q Consensus 91 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~ 170 (420)
++-...++.++.+.|.. .. ...+.++. .++|||||+|.||..+|..|...| ++|++|+|+++.... +
T Consensus 114 R~~~~~~~~~~~g~w~~----~~---~~~~~~l~--g~tvgIiG~G~IG~~vA~~l~~~G--~~V~~~d~~~~~~~~--~ 180 (334)
T 2pi1_A 114 KRLKRIEDRVKKLNFSQ----DS---EILARELN--RLTLGVIGTGRIGSRVAMYGLAFG--MKVLCYDVVKREDLK--E 180 (334)
T ss_dssp TTHHHHHHHHTTTCCCC----CG---GGCBCCGG--GSEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSCCHHHH--H
T ss_pred HhHHHHHHHHHcCCCcc----cc---Cccceecc--CceEEEECcCHHHHHHHHHHHHCc--CEEEEECCCcchhhH--h
Confidence 66667788888887753 10 11233444 689999999999999999999887 999999998754321 2
Q ss_pred hcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEccChh-hHHHHH-HHhhhcCCCCCeEEEeccCCCcc
Q 014700 171 KHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFL-EGISDYVDPGLPFISLSKGLELN 239 (420)
Q Consensus 171 ~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIlaVp~~-~l~~vl-~~i~~~l~~~~iVVs~snGi~~~ 239 (420)
.+ +.. .++++++++||+|++++|.. .++.++ ++....+++++++|+++.|-..+
T Consensus 181 ~g--------------~~~-~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRg~~vd 236 (334)
T 2pi1_A 181 KG--------------CVY-TSLDELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLINTARGKVVD 236 (334)
T ss_dssp TT--------------CEE-CCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBC
T ss_pred cC--------------cee-cCHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhhCCCCcEEEECCCCcccC
Confidence 22 122 25889999999999999953 454444 34566788999999999876554
No 114
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=98.88 E-value=3.1e-09 Score=106.56 Aligned_cols=124 Identities=15% Similarity=0.152 Sum_probs=88.4
Q ss_pred ccCCccccchhhhchhcceeccccccccccchhhcCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHH
Q 014700 91 TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (420)
Q Consensus 91 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~ 170 (420)
++-...+|.++.|.|. |.+.. ...+.++. .++|||||+|.||..+|..|...| ++|.+|+|+... +...+
T Consensus 147 R~~~~~~~~~r~g~~~----w~~~~-~~~~~~l~--gktvGIIGlG~IG~~vA~~l~~fG--~~V~~~d~~~~~-~~~~~ 216 (365)
T 4hy3_A 147 RGIVDADIAFQEGTEL----WGGEG-NASARLIA--GSEIGIVGFGDLGKALRRVLSGFR--ARIRVFDPWLPR-SMLEE 216 (365)
T ss_dssp HTTTHHHHHHHHTCCC----CSSSS-TTSCCCSS--SSEEEEECCSHHHHHHHHHHTTSC--CEEEEECSSSCH-HHHHH
T ss_pred hchhHHHHHHHcCCcc----ccccc-cccccccC--CCEEEEecCCcccHHHHHhhhhCC--CEEEEECCCCCH-HHHhh
Confidence 6777788888888752 54211 11223334 689999999999999999998777 999999997532 23333
Q ss_pred hcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEccChh-hHHHHH-HHhhhcCCCCCeEEEeccCCCcc
Q 014700 171 KHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFL-EGISDYVDPGLPFISLSKGLELN 239 (420)
Q Consensus 171 ~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIlaVp~~-~l~~vl-~~i~~~l~~~~iVVs~snGi~~~ 239 (420)
.| +. ..+++++++.||+|++++|.. .++.++ ++....++++.++|+++.|-..+
T Consensus 217 ~g--------------~~-~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vd 272 (365)
T 4hy3_A 217 NG--------------VE-PASLEDVLTKSDFIFVVAAVTSENKRFLGAEAFSSMRRGAAFILLSRADVVD 272 (365)
T ss_dssp TT--------------CE-ECCHHHHHHSCSEEEECSCSSCC---CCCHHHHHTSCTTCEEEECSCGGGSC
T ss_pred cC--------------ee-eCCHHHHHhcCCEEEEcCcCCHHHHhhcCHHHHhcCCCCcEEEECcCCchhC
Confidence 33 12 237899999999999999954 566666 45667789999999999886554
No 115
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=98.87 E-value=2e-09 Score=105.95 Aligned_cols=119 Identities=11% Similarity=0.069 Sum_probs=86.4
Q ss_pred ccCCccccchhhhchhcceeccccccccccchhhcCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHH
Q 014700 91 TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (420)
Q Consensus 91 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~ 170 (420)
++-...+|.++.+.|+. + .+.++. .++|+|||+|.||..+|..|...| ++|++|+|+++.. ...+
T Consensus 118 R~~~~~~~~~~~g~w~~---~-------~~~~l~--g~~vgIIG~G~IG~~~A~~l~~~G--~~V~~~d~~~~~~-~~~~ 182 (313)
T 2ekl_A 118 RKMYTSMALAKSGIFKK---I-------EGLELA--GKTIGIVGFGRIGTKVGIIANAMG--MKVLAYDILDIRE-KAEK 182 (313)
T ss_dssp HTHHHHHHHHHTTCCCC---C-------CCCCCT--TCEEEEESCSHHHHHHHHHHHHTT--CEEEEECSSCCHH-HHHH
T ss_pred hCHHHHHHHHHcCCCCC---C-------CCCCCC--CCEEEEEeeCHHHHHHHHHHHHCC--CEEEEECCCcchh-HHHh
Confidence 56667788888887752 1 112233 679999999999999999999888 9999999987653 2333
Q ss_pred hcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEccChhh-HHHHH-HHhhhcCCCCCeEEEeccCCCcc
Q 014700 171 KHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQF-SSSFL-EGISDYVDPGLPFISLSKGLELN 239 (420)
Q Consensus 171 ~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIlaVp~~~-l~~vl-~~i~~~l~~~~iVVs~snGi~~~ 239 (420)
.| +.. .+++++++.+|+|++++|... ++.++ ++..+.++++.++|+++.|-..+
T Consensus 183 ~g--------------~~~-~~l~ell~~aDvVvl~~P~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd 238 (313)
T 2ekl_A 183 IN--------------AKA-VSLEELLKNSDVISLHVTVSKDAKPIIDYPQFELMKDNVIIVNTSRAVAVN 238 (313)
T ss_dssp TT--------------CEE-CCHHHHHHHCSEEEECCCCCTTSCCSBCHHHHHHSCTTEEEEESSCGGGBC
T ss_pred cC--------------cee-cCHHHHHhhCCEEEEeccCChHHHHhhCHHHHhcCCCCCEEEECCCCcccC
Confidence 22 122 378888899999999999643 54444 34556688899999998874433
No 116
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=98.86 E-value=1.5e-07 Score=102.35 Aligned_cols=169 Identities=16% Similarity=0.186 Sum_probs=114.3
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhc-------C-CCCCCCCCCCCCceEEeCCHHHhc
Q 014700 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKH-------C-NCRYFPEQKLPENVIATTDAKTAL 197 (420)
Q Consensus 126 ~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g-------~-~~~~l~~~~l~~~i~a~td~~eal 197 (420)
.++||+|||+|.||..+|..++.+| ++|+++|++++.++...+.- . .............+..+++.++ +
T Consensus 315 ~i~~v~ViGaG~MG~gIA~~~a~aG--~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-l 391 (742)
T 3zwc_A 315 PVSSVGVLGLGTMGRGIAISFARVG--ISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTKE-L 391 (742)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTT--CEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEESCGGG-G
T ss_pred cccEEEEEcccHHHHHHHHHHHhCC--CchhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcccCcHHH-H
Confidence 3679999999999999999999999 99999999987654332110 0 0000011122345677888765 7
Q ss_pred cCCcEEEEccCh--hhHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCeEEE--ECcccHHHHhh
Q 014700 198 LGADYCLHAMPV--QFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIAL--SGPSFALELMN 273 (420)
Q Consensus 198 ~~aDiVIlaVp~--~~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~~vl--~GP~~a~ev~~ 273 (420)
.+||+||-||+. ..-+++++++..++++++++.+-+.++... .+.+.+..+ ..+..+ ..|...
T Consensus 392 ~~aDlVIEAV~E~l~iK~~vf~~le~~~~~~aIlASNTSsl~i~-------~ia~~~~~p-~r~ig~HFfnP~~~----- 458 (742)
T 3zwc_A 392 STVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSALNVD-------DIASSTDRP-QLVIGTHFFSPAHV----- 458 (742)
T ss_dssp GSCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHH-------HHHTTSSCG-GGEEEEECCSSTTT-----
T ss_pred hhCCEEEEeccccHHHHHHHHHHHhhcCCCCceEEecCCcCChH-------HHHhhcCCc-cccccccccCCCCC-----
Confidence 899999999995 457788999999999999998888877753 233333322 122222 223221
Q ss_pred cCCe-EEEEe-cCCHHHHHHHHHHHhcCCceEEEcCChhH
Q 014700 274 KLPT-AMVVA-SKDRKLANAVQQLLASKHLRISTSSDVTG 311 (420)
Q Consensus 274 g~~t-~i~ia-~~d~e~~~~l~~ll~~~g~~v~~s~Di~g 311 (420)
.+. -++-+ ..+++.++.+.++.+..|...+...|..|
T Consensus 459 -m~LVEvi~g~~Ts~e~~~~~~~~~~~lgK~pV~vkd~pG 497 (742)
T 3zwc_A 459 -MRLLEVIPSRYSSPTTIATVMSLSKKIGKIGVVVGNCYG 497 (742)
T ss_dssp -CCEEEEEECSSCCHHHHHHHHHHHHHTTCEEEECCCSTT
T ss_pred -CceEEEecCCCCCHHHHHHHHHHHHHhCCCCcccCCCCC
Confidence 111 12222 24688999999999999998888888654
No 117
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=98.86 E-value=2.1e-09 Score=107.28 Aligned_cols=137 Identities=10% Similarity=0.095 Sum_probs=91.9
Q ss_pred ccCCccccchhhhchhcceeccccccc-ccc-chhhcCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHH
Q 014700 91 TRDGRDRRKIVKVAWEKLVRWSRTWRS-KAK-TDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSI 168 (420)
Q Consensus 91 ~~~~~~~r~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i 168 (420)
++-...++.++.+.|... |.. ++. ..+ .++. .++|+|||+|.||..+|..|...| ++|++|+|+.+... .
T Consensus 135 R~~~~~~~~~~~g~w~~~--~~~-~~~~~~~~~~l~--g~tvGIIG~G~IG~~vA~~l~~~G--~~V~~~d~~~~~~~-~ 206 (347)
T 1mx3_A 135 RRATWLHQALREGTRVQS--VEQ-IREVASGAARIR--GETLGIIGLGRVGQAVALRAKAFG--FNVLFYDPYLSDGV-E 206 (347)
T ss_dssp HCHHHHHHHHHTTCCCCS--HHH-HHHHTTTCCCCT--TCEEEEECCSHHHHHHHHHHHTTT--CEEEEECTTSCTTH-H
T ss_pred HhHHHHHHHHHcCCcccc--ccc-ccccccCccCCC--CCEEEEEeECHHHHHHHHHHHHCC--CEEEEECCCcchhh-H
Confidence 555667778888877431 110 000 001 1233 689999999999999999999887 89999998754311 1
Q ss_pred HHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEccChh-hHHHHH-HHhhhcCCCCCeEEEeccCCCcchhhhHHH
Q 014700 169 NEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFL-EGISDYVDPGLPFISLSKGLELNTLRMMSQ 246 (420)
Q Consensus 169 ~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIlaVp~~-~l~~vl-~~i~~~l~~~~iVVs~snGi~~~t~~~~se 246 (420)
.+.| +....+++++++.||+|++++|.. .++.++ ++....++++.++|+++.|-..++ +.+.+
T Consensus 207 ~~~g--------------~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~-~aL~~ 271 (347)
T 1mx3_A 207 RALG--------------LQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVNTARGGLVDE-KALAQ 271 (347)
T ss_dssp HHHT--------------CEECSSHHHHHHHCSEEEECCCCCTTCTTSBSHHHHTTSCTTEEEEECSCTTSBCH-HHHHH
T ss_pred hhcC--------------CeecCCHHHHHhcCCEEEEcCCCCHHHHHHhHHHHHhcCCCCCEEEECCCChHHhH-HHHHH
Confidence 2222 233347888899999999999964 455555 455667889999999998855443 33444
Q ss_pred HHHH
Q 014700 247 IIPQ 250 (420)
Q Consensus 247 ~l~~ 250 (420)
.+.+
T Consensus 272 aL~~ 275 (347)
T 1mx3_A 272 ALKE 275 (347)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 4543
No 118
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=98.86 E-value=1.8e-09 Score=109.73 Aligned_cols=128 Identities=15% Similarity=0.184 Sum_probs=90.6
Q ss_pred ccCCccccchhhhchhcceeccccccccccchhhcCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHH
Q 014700 91 TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (420)
Q Consensus 91 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~ 170 (420)
|+-...++.++.|.|++. . ..+.++. .++|||||+|.||..+|.+|...| ++|++|+|+++. .
T Consensus 119 R~i~~~~~~~~~g~W~~~---~-----~~~~el~--gktlGiIGlG~IG~~vA~~l~~~G--~~V~~~d~~~~~-----~ 181 (404)
T 1sc6_A 119 RGVPEANAKAHRGVGNKL---A-----AGSFEAR--GKKLGIIGYGHIGTQLGILAESLG--MYVYFYDIENKL-----P 181 (404)
T ss_dssp HTHHHHHHHHHHTCCC-------------CCCST--TCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSCCC-----C
T ss_pred hChHHHHHHHHcCCcccc---C-----CCccccC--CCEEEEEeECHHHHHHHHHHHHCC--CEEEEEcCCchh-----c
Confidence 556677888888877652 1 1223444 789999999999999999999887 999999986531 0
Q ss_pred hcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEccChh-hHHHHH-HHhhhcCCCCCeEEEeccCCCcchhhhHHHHH
Q 014700 171 KHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFL-EGISDYVDPGLPFISLSKGLELNTLRMMSQII 248 (420)
Q Consensus 171 ~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIlaVp~~-~l~~vl-~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l 248 (420)
. .++....+++++++.||+|++++|.. .++.++ ++....+++++++|+++.|-..++ ..+.+.+
T Consensus 182 ~-------------~~~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIN~aRg~~vd~-~aL~~aL 247 (404)
T 1sc6_A 182 L-------------GNATQVQHLSDLLNMSDVVSLHVPENPSTKNMMGAKEISLMKPGSLLINASRGTVVDI-PALADAL 247 (404)
T ss_dssp C-------------TTCEECSCHHHHHHHCSEEEECCCSSTTTTTCBCHHHHHHSCTTEEEEECSCSSSBCH-HHHHHHH
T ss_pred c-------------CCceecCCHHHHHhcCCEEEEccCCChHHHHHhhHHHHhhcCCCeEEEECCCChHHhH-HHHHHHH
Confidence 0 01344458999999999999999964 455555 445667889999999998865543 2333444
Q ss_pred H
Q 014700 249 P 249 (420)
Q Consensus 249 ~ 249 (420)
.
T Consensus 248 ~ 248 (404)
T 1sc6_A 248 A 248 (404)
T ss_dssp H
T ss_pred H
Confidence 3
No 119
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=98.85 E-value=3.1e-09 Score=105.39 Aligned_cols=130 Identities=12% Similarity=0.132 Sum_probs=91.2
Q ss_pred ccCCccccchhhhchhcceeccccccccccchhhcCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHH
Q 014700 91 TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (420)
Q Consensus 91 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~ 170 (420)
|+-...+|.++.+.|. |.. ..+.++. .++|+|||+|.||..+|..|...| ++|++|+|+++.. +.+
T Consensus 120 R~~~~~~~~~~~g~w~----~~~----~~~~~l~--g~~vgIiG~G~IG~~~A~~l~~~G--~~V~~~d~~~~~~--~~~ 185 (333)
T 1j4a_A 120 RQDKAMDEKVARHDLR----WAP----TIGREVR--DQVVGVVGTGHIGQVFMQIMEGFG--AKVITYDIFRNPE--LEK 185 (333)
T ss_dssp HTHHHHHHHHHTTBCC----CTT----CCBCCGG--GSEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSCCHH--HHH
T ss_pred cCHHHHHHHHHcCCCc----cCC----cccccCC--CCEEEEEccCHHHHHHHHHHHHCC--CEEEEECCCcchh--HHh
Confidence 5666778888888773 431 2223344 679999999999999999999887 8999999987543 221
Q ss_pred hcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEccChh-hHHHHH-HHhhhcCCCCCeEEEeccCCCcchhhhHHHHH
Q 014700 171 KHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFL-EGISDYVDPGLPFISLSKGLELNTLRMMSQII 248 (420)
Q Consensus 171 ~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIlaVp~~-~l~~vl-~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l 248 (420)
.. ...++++++++.||+|++++|.. .++.++ ++....++++.++|+++.|-..++ +.+.+.+
T Consensus 186 -~~--------------~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~-~aL~~aL 249 (333)
T 1j4a_A 186 -KG--------------YYVDSLDDLYKQADVISLHVPDVPANVHMINDESIAKMKQDVVIVNVSRGPLVDT-DAVIRGL 249 (333)
T ss_dssp -TT--------------CBCSCHHHHHHHCSEEEECSCCCGGGTTCBSHHHHHHSCTTEEEEECSCGGGBCH-HHHHHHH
T ss_pred -hC--------------eecCCHHHHHhhCCEEEEcCCCcHHHHHHHhHHHHhhCCCCcEEEECCCCcccCH-HHHHHHH
Confidence 11 11236888889999999999954 355555 345567889999999988754443 3344444
Q ss_pred HH
Q 014700 249 PQ 250 (420)
Q Consensus 249 ~~ 250 (420)
.+
T Consensus 250 ~~ 251 (333)
T 1j4a_A 250 DS 251 (333)
T ss_dssp HH
T ss_pred Hh
Confidence 43
No 120
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=98.85 E-value=9.1e-09 Score=101.27 Aligned_cols=101 Identities=20% Similarity=0.271 Sum_probs=74.2
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCC--eEEEEeCCHHHHHHHHHh--cCCCCCCCCCCCCCceEEeCCHHHhccCCcEE
Q 014700 128 NKVVVLGGGSFGTAMAAHVANKKSQL--KVYMLMRDPAVCQSINEK--HCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (420)
Q Consensus 128 mkI~IIGaGamG~alA~~La~aG~~~--~V~l~~r~~~~~~~i~~~--g~~~~~l~~~~l~~~i~a~td~~eal~~aDiV 203 (420)
|||+|||+|.||+++|..|+.+| + +|++||+++++++.+... +.. .+. .+..+.. ++. +++++||+|
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g--~~~~V~l~D~~~~~~~~~~~~l~~~~-~~~----~~~~i~~-~d~-~~~~~aDvV 71 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKG--FAREMVLIDVDKKRAEGDALDLIHGT-PFT----RRANIYA-GDY-ADLKGSDVV 71 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT--CCSEEEEECSSHHHHHHHHHHHHHHG-GGS----CCCEEEE-CCG-GGGTTCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCC--CCCeEEEEeCChHHHHHHHHHHHhhh-hhc----CCcEEEe-CCH-HHhCCCCEE
Confidence 69999999999999999999998 7 999999998877665421 111 111 1223444 354 568999999
Q ss_pred EEccChhh----------------HHHHHHHhhhcCCCCCeEEEeccCCCc
Q 014700 204 LHAMPVQF----------------SSSFLEGISDYVDPGLPFISLSKGLEL 238 (420)
Q Consensus 204 IlaVp~~~----------------l~~vl~~i~~~l~~~~iVVs~snGi~~ 238 (420)
|+++|... ++++++.+.++. ++.++|.++|++..
T Consensus 72 iiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-~~~~ii~~tNp~~~ 121 (319)
T 1a5z_A 72 IVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYA-PDSIVIVVTNPVDV 121 (319)
T ss_dssp EECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECSSSHHH
T ss_pred EEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEeCCcHHH
Confidence 99999532 567778887774 67788888987653
No 121
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=98.85 E-value=2.3e-09 Score=109.04 Aligned_cols=128 Identities=14% Similarity=0.198 Sum_probs=89.7
Q ss_pred ccCCccccchhhhchhcceeccccccccccchhhcCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHH
Q 014700 91 TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (420)
Q Consensus 91 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~ 170 (420)
|+-...++.+++|.|++. . ..+.++. .++|||||+|.||..+|..|...| ++|++|+++++.. .
T Consensus 130 R~i~~~~~~~~~g~W~~~---~-----~~~~el~--gktvGIIGlG~IG~~vA~~l~~~G--~~V~~yd~~~~~~----~ 193 (416)
T 3k5p_A 130 RRIFPRSVSAHAGGWEKT---A-----IGSREVR--GKTLGIVGYGNIGSQVGNLAESLG--MTVRYYDTSDKLQ----Y 193 (416)
T ss_dssp TTHHHHHHHHHTTCCCCC---C-----TTCCCST--TCEEEEECCSHHHHHHHHHHHHTT--CEEEEECTTCCCC----B
T ss_pred cccHHHHHhhhccccccc---C-----CCCccCC--CCEEEEEeeCHHHHHHHHHHHHCC--CEEEEECCcchhc----c
Confidence 566677888888877762 1 1122344 689999999999999999999887 9999999864210 0
Q ss_pred hcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEccCh-hhHHHHH-HHhhhcCCCCCeEEEeccCCCcchhhhHHHHH
Q 014700 171 KHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPV-QFSSSFL-EGISDYVDPGLPFISLSKGLELNTLRMMSQII 248 (420)
Q Consensus 171 ~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIlaVp~-~~l~~vl-~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l 248 (420)
.......+++++++.||+|++++|. ..++.++ ++....++++.++|+++.|-..++ +.+.+.+
T Consensus 194 --------------~~~~~~~sl~ell~~aDvV~lhvPlt~~T~~li~~~~l~~mk~gailIN~aRG~vvd~-~aL~~aL 258 (416)
T 3k5p_A 194 --------------GNVKPAASLDELLKTSDVVSLHVPSSKSTSKLITEAKLRKMKKGAFLINNARGSDVDL-EALAKVL 258 (416)
T ss_dssp --------------TTBEECSSHHHHHHHCSEEEECCCC-----CCBCHHHHHHSCTTEEEEECSCTTSBCH-HHHHHHH
T ss_pred --------------cCcEecCCHHHHHhhCCEEEEeCCCCHHHhhhcCHHHHhhCCCCcEEEECCCChhhhH-HHHHHHH
Confidence 0123446899999999999999995 4455555 345667889999999999866553 2333444
Q ss_pred H
Q 014700 249 P 249 (420)
Q Consensus 249 ~ 249 (420)
.
T Consensus 259 ~ 259 (416)
T 3k5p_A 259 Q 259 (416)
T ss_dssp H
T ss_pred H
Confidence 3
No 122
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=98.83 E-value=5.9e-09 Score=107.94 Aligned_cols=117 Identities=17% Similarity=0.216 Sum_probs=84.7
Q ss_pred CeEEEEcccHH-HHHHHHHHHhc--CC-CCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEE
Q 014700 128 NKVVVLGGGSF-GTAMAAHVANK--KS-QLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (420)
Q Consensus 128 mkI~IIGaGam-G~alA~~La~a--G~-~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiV 203 (420)
|||+|||+|.+ |.++|..|+.+ +. .++|.+||+++++++.++... ..+++...++..+.+++|+++++++||+|
T Consensus 29 ~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~--~~~l~~~~~~~~I~~t~D~~eal~~AD~V 106 (472)
T 1u8x_X 29 FSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGAC--DVFIREKAPDIEFAATTDPEEAFTDVDFV 106 (472)
T ss_dssp EEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHH--HHHHHHHCTTSEEEEESCHHHHHSSCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHH--HHHhccCCCCCEEEEECCHHHHHcCCCEE
Confidence 59999999999 77788888877 32 379999999998877765432 12333444567888889998889999999
Q ss_pred EEccChhh------------------------------------HHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHH
Q 014700 204 LHAMPVQF------------------------------------SSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQI 247 (420)
Q Consensus 204 IlaVp~~~------------------------------------l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~ 247 (420)
|+++|... +.++++.+..+- |+.++|..+|-++ .+.+.
T Consensus 107 Viaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~-P~A~ii~~TNPvd-----i~T~~ 180 (472)
T 1u8x_X 107 MAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYS-PDAWMLNYSNPAA-----IVAEA 180 (472)
T ss_dssp EECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECCSCHH-----HHHHH
T ss_pred EEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHC-CCeEEEEeCCcHH-----HHHHH
Confidence 99998732 445556666654 6888888888653 34455
Q ss_pred HHHHh
Q 014700 248 IPQAL 252 (420)
Q Consensus 248 l~~~l 252 (420)
+.+..
T Consensus 181 ~~k~~ 185 (472)
T 1u8x_X 181 TRRLR 185 (472)
T ss_dssp HHHHS
T ss_pred HHHhC
Confidence 55554
No 123
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=98.83 E-value=8.2e-09 Score=101.23 Aligned_cols=106 Identities=17% Similarity=0.184 Sum_probs=74.2
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEcc
Q 014700 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAM 207 (420)
Q Consensus 128 mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIlaV 207 (420)
|||+|||+|.||+++|..|+.++.+++|++||+++++++.+...-... .+....+..+..++|+++ +++||+||+++
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~--~~~~~~~~~i~~t~d~~~-l~~aDvViiav 77 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYES--GPVGLFDTKVTGSNDYAD-TANSDIVIITA 77 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTT--HHHHTCCCEEEEESCGGG-GTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhh--hhcccCCcEEEECCCHHH-HCCCCEEEEeC
Confidence 699999999999999999998633389999999987776543210000 000011335677788876 89999999999
Q ss_pred Chh----------------hHHHHHHHhhhcCCCCCeEEEeccCCC
Q 014700 208 PVQ----------------FSSSFLEGISDYVDPGLPFISLSKGLE 237 (420)
Q Consensus 208 p~~----------------~l~~vl~~i~~~l~~~~iVVs~snGi~ 237 (420)
|.. .++++++.+.++. ++..++.++|.+.
T Consensus 78 ~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-~~~~viv~tNP~~ 122 (310)
T 1guz_A 78 GLPRKPGMTREDLLMKNAGIVKEVTDNIMKHS-KNPIIIVVSNPLD 122 (310)
T ss_dssp SCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-SSCEEEECCSSHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEEcCchH
Confidence 742 1356667777774 6777777888654
No 124
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=98.83 E-value=2.2e-09 Score=105.06 Aligned_cols=126 Identities=19% Similarity=0.211 Sum_probs=89.8
Q ss_pred ccCCccccchhhhchhcceeccccccccccchhhcCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHH
Q 014700 91 TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (420)
Q Consensus 91 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~ 170 (420)
++-...++.++.+.|+.. .+ ..++. .++|+|||+|.||..+|..|...| ++|.+|+|+++ +.
T Consensus 99 R~~~~~~~~~~~g~w~~~---~~------~~~l~--g~~vgIIG~G~IG~~~A~~l~~~G--~~V~~~dr~~~--~~--- 160 (303)
T 1qp8_A 99 KRIIQYGEKMKRGDYGRD---VE------IPLIQ--GEKVAVLGLGEIGTRVGKILAALG--AQVRGFSRTPK--EG--- 160 (303)
T ss_dssp TTHHHHHHHHHTTCCCCC---SC------CCCCT--TCEEEEESCSTHHHHHHHHHHHTT--CEEEEECSSCC--CS---
T ss_pred hCHHHHHHHHHcCCCCCC---CC------CCCCC--CCEEEEEccCHHHHHHHHHHHHCC--CEEEEECCCcc--cc---
Confidence 566677888888877541 10 11223 679999999999999999999888 89999998764 11
Q ss_pred hcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEccChh-hHHHHHH-HhhhcCCCCCeEEEeccCCCcchhhhHHHHH
Q 014700 171 KHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFLE-GISDYVDPGLPFISLSKGLELNTLRMMSQII 248 (420)
Q Consensus 171 ~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIlaVp~~-~l~~vl~-~i~~~l~~~~iVVs~snGi~~~t~~~~se~l 248 (420)
+. ....+++++++.||+|++++|.. .++.++. +..+.+++++++|+++.|-..++ ..+.+.+
T Consensus 161 -~~--------------~~~~~l~ell~~aDvV~l~~P~~~~t~~~i~~~~l~~mk~gailin~srg~~vd~-~aL~~aL 224 (303)
T 1qp8_A 161 -PW--------------RFTNSLEEALREARAAVCALPLNKHTRGLVKYQHLALMAEDAVFVNVGRAEVLDR-DGVLRIL 224 (303)
T ss_dssp -SS--------------CCBSCSHHHHTTCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCH-HHHHHHH
T ss_pred -Cc--------------ccCCCHHHHHhhCCEEEEeCcCchHHHHHhCHHHHhhCCCCCEEEECCCCcccCH-HHHHHHH
Confidence 10 11236788899999999999965 4666663 56677899999999998744432 2344444
Q ss_pred HH
Q 014700 249 PQ 250 (420)
Q Consensus 249 ~~ 250 (420)
.+
T Consensus 225 ~~ 226 (303)
T 1qp8_A 225 KE 226 (303)
T ss_dssp HH
T ss_pred Hh
Confidence 43
No 125
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=98.81 E-value=7.7e-09 Score=102.30 Aligned_cols=102 Identities=24% Similarity=0.408 Sum_probs=74.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHH--hcCCCCCCCCCCCCCceEEeCCHHHhccCCcEE
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINE--KHCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~-~V~l~~r~~~~~~~i~~--~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiV 203 (420)
.|||+|||+|.||+++|..|+.+| + +|.+||++++.++.... .+... + ...+.++..++|. +++++||+|
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g--~~~V~L~Di~~~~l~~~~~~l~~~~~-~---~~~~~~i~~t~d~-~al~~aD~V 86 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKD--LGDVYMFDIIEGVPQGKALDLNHCMA-L---IGSPAKIFGENNY-EYLQNSDVV 86 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CCEEEEECSSTTHHHHHHHHHHHHHH-H---HTCCCCEEEESCG-GGGTTCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CCeEEEEECCHHHHHHHHHHHHhHhh-c---cCCCCEEEECCCH-HHHCCCCEE
Confidence 479999999999999999999998 6 89999999877654211 11100 0 0123467888888 679999999
Q ss_pred EEcc--Ch--------------hhHHHHHHHhhhcCCCCCeEEEeccCC
Q 014700 204 LHAM--PV--------------QFSSSFLEGISDYVDPGLPFISLSKGL 236 (420)
Q Consensus 204 IlaV--p~--------------~~l~~vl~~i~~~l~~~~iVVs~snGi 236 (420)
|+++ |. ...+++++++.++. ++.+++..+|..
T Consensus 87 I~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~tNP~ 134 (328)
T 2hjr_A 87 IITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYC-PNAFVICITNPL 134 (328)
T ss_dssp EECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSH
T ss_pred EEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHC-CCeEEEEecCch
Confidence 9998 42 22667778887775 677877778743
No 126
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=98.80 E-value=1.6e-09 Score=106.52 Aligned_cols=119 Identities=16% Similarity=0.165 Sum_probs=87.2
Q ss_pred ccCCccccchhhhchhcceeccccccccccchhhcCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHH
Q 014700 91 TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (420)
Q Consensus 91 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~ 170 (420)
++-...++.++.+.|++ |.+. ...+.++. .++|+|||+|.||..+|..|...| ++|++|+|+++..+
T Consensus 115 R~~~~~~~~~~~g~w~~---~~~~--~~~~~~l~--g~~vgIIG~G~IG~~~A~~l~~~G--~~V~~~d~~~~~~~---- 181 (311)
T 2cuk_A 115 RRVVEGAAYARDGLWKA---WHPE--LLLGLDLQ--GLTLGLVGMGRIGQAVAKRALAFG--MRVVYHARTPKPLP---- 181 (311)
T ss_dssp TTHHHHHHHHHTTCCCC---CCTT--TTCBCCCT--TCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSCCSSS----
T ss_pred cChHHHHHHHHcCCCCc---cccc--cccCcCCC--CCEEEEEEECHHHHHHHHHHHHCC--CEEEEECCCCcccc----
Confidence 66667888899998864 4321 11122333 679999999999999999999887 89999999764211
Q ss_pred hcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEccChh-hHHHHHH-HhhhcCCCCCeEEEeccCCCcc
Q 014700 171 KHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFLE-GISDYVDPGLPFISLSKGLELN 239 (420)
Q Consensus 171 ~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIlaVp~~-~l~~vl~-~i~~~l~~~~iVVs~snGi~~~ 239 (420)
+. ..+++++++.||+|++++|.. .++.++. +....++++.++|+++.|-..+
T Consensus 182 ----------------~~-~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~srg~~vd 235 (311)
T 2cuk_A 182 ----------------YP-FLSLEELLKEADVVSLHTPLTPETHRLLNRERLFAMKRGAILLNTARGALVD 235 (311)
T ss_dssp ----------------SC-BCCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHTTSCTTCEEEECSCGGGBC
T ss_pred ----------------cc-cCCHHHHHhhCCEEEEeCCCChHHHhhcCHHHHhhCCCCcEEEECCCCCccC
Confidence 01 237888889999999999975 4555553 4556788999999998874433
No 127
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=98.80 E-value=1.3e-09 Score=107.68 Aligned_cols=120 Identities=17% Similarity=0.252 Sum_probs=87.3
Q ss_pred ccCCccccchhhhchhcceeccccccccccchhhcCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHH
Q 014700 91 TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (420)
Q Consensus 91 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~ 170 (420)
++-...+|.++.+.|++. ...++. .++|||||+|.||..+|..|...| ++|++|+|+++..+.+
T Consensus 116 R~~~~~~~~~~~g~W~~~----------~~~~l~--g~tvGIIGlG~IG~~vA~~l~~~G--~~V~~~dr~~~~~~~~-- 179 (324)
T 3hg7_A 116 RQLPLYREQQKQRLWQSH----------PYQGLK--GRTLLILGTGSIGQHIAHTGKHFG--MKVLGVSRSGRERAGF-- 179 (324)
T ss_dssp TTHHHHHHHHHTTCCCCC----------CCCCST--TCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSCCCCTTC--
T ss_pred hChHHHHHHHhhCCCcCC----------CCcccc--cceEEEEEECHHHHHHHHHHHhCC--CEEEEEcCChHHhhhh--
Confidence 666677888888877652 111333 689999999999999999999888 9999999876311100
Q ss_pred hcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEccCh-hhHHHHH-HHhhhcCCCCCeEEEeccCCCcch
Q 014700 171 KHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPV-QFSSSFL-EGISDYVDPGLPFISLSKGLELNT 240 (420)
Q Consensus 171 ~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIlaVp~-~~l~~vl-~~i~~~l~~~~iVVs~snGi~~~t 240 (420)
.......++++++++||+|++++|. ..++.++ ++....++++.++|+++.|-..++
T Consensus 180 --------------~~~~~~~~l~ell~~aDvV~l~lPlt~~T~~li~~~~l~~mk~gailIN~aRG~~vde 237 (324)
T 3hg7_A 180 --------------DQVYQLPALNKMLAQADVIVSVLPATRETHHLFTASRFEHCKPGAILFNVGRGNAINE 237 (324)
T ss_dssp --------------SEEECGGGHHHHHHTCSEEEECCCCCSSSTTSBCTTTTTCSCTTCEEEECSCGGGBCH
T ss_pred --------------hcccccCCHHHHHhhCCEEEEeCCCCHHHHHHhHHHHHhcCCCCcEEEECCCchhhCH
Confidence 0112235788999999999999995 3455555 345667889999999998865543
No 128
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=98.79 E-value=1.4e-08 Score=105.27 Aligned_cols=79 Identities=16% Similarity=0.233 Sum_probs=61.2
Q ss_pred CCeEEEEcccHH--HHHHHHHHHhc----CCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCC
Q 014700 127 TNKVVVLGGGSF--GTAMAAHVANK----KSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGA 200 (420)
Q Consensus 127 ~mkI~IIGaGam--G~alA~~La~a----G~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~a 200 (420)
+|||+|||+|.| |.++|..|++. | ++|.+||+++++++.+.... ..+++....+.++.+++|+++++++|
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~~--~eV~L~Di~~e~l~~~~~~~--~~~l~~~~~~~~I~~ttD~~eal~dA 78 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSG--STVTLMDIDEERLDAILTIA--KKYVEEVGADLKFEKTMNLDDVIIDA 78 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGGGTT--CEEEEECSCHHHHHHHHHHH--HHHHHHTTCCCEEEEESCHHHHHTTC
T ss_pred CCEEEEECCCchHHHHHHHHHHHhcCcCCC--CEEEEEeCCHHHHHHHHHHH--HHHhccCCCCcEEEEECCHHHHhCCC
Confidence 579999999996 67778888754 5 89999999998877665432 12233334566788889998889999
Q ss_pred cEEEEccCh
Q 014700 201 DYCLHAMPV 209 (420)
Q Consensus 201 DiVIlaVp~ 209 (420)
|+||++++.
T Consensus 79 D~VIiaagv 87 (480)
T 1obb_A 79 DFVINTAMV 87 (480)
T ss_dssp SEEEECCCT
T ss_pred CEEEECCCc
Confidence 999999974
No 129
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=98.78 E-value=2.1e-08 Score=98.05 Aligned_cols=102 Identities=18% Similarity=0.202 Sum_probs=70.6
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCC--eEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEE
Q 014700 128 NKVVVLGGGSFGTAMAAHVANKKSQL--KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (420)
Q Consensus 128 mkI~IIGaGamG~alA~~La~aG~~~--~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIl 205 (420)
|||+|||+|.||+++|..|+.+| + +|.+||+++++++.....-.... + +..+..+.. ++. +++++||+||+
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g--~~~eV~L~D~~~~~~~~~~~~l~~~~--~-~~~~~~i~~-~~~-~a~~~aDvVIi 73 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRG--SCSELVLVDRDEDRAQAEAEDIAHAA--P-VSHGTRVWH-GGH-SELADAQVVIL 73 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--CCSEEEEECSSHHHHHHHHHHHTTSC--C-TTSCCEEEE-ECG-GGGTTCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCC--CCCEEEEEeCCHHHHHHHHHhhhhhh--h-hcCCeEEEE-CCH-HHhCCCCEEEE
Confidence 69999999999999999999988 7 99999999876553222110100 1 111223333 454 56899999999
Q ss_pred ccChh----------------hHHHHHHHhhhcCCCCCeEEEeccCCC
Q 014700 206 AMPVQ----------------FSSSFLEGISDYVDPGLPFISLSKGLE 237 (420)
Q Consensus 206 aVp~~----------------~l~~vl~~i~~~l~~~~iVVs~snGi~ 237 (420)
+++.. .++++++++.++ .++.+++..+|+.+
T Consensus 74 ~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~~~vi~~tNP~~ 120 (304)
T 2v6b_A 74 TAGANQKPGESRLDLLEKNADIFRELVPQITRA-APDAVLLVTSNPVD 120 (304)
T ss_dssp CC------------CHHHHHHHHHHHHHHHHHH-CSSSEEEECSSSHH
T ss_pred cCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHh-CCCeEEEEecCchH
Confidence 99532 247777888877 47888887888764
No 130
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=98.77 E-value=5.2e-08 Score=94.95 Aligned_cols=115 Identities=11% Similarity=0.170 Sum_probs=78.0
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHH--HHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEE
Q 014700 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQ--SINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (420)
Q Consensus 128 mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~--~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIl 205 (420)
|||+|||+|.||+++|..|+.+|...+|.+||++++.++ .+.-.+... ++ ..+..+.+++| .+++++||+||+
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~-~~---~~~~~i~~t~d-~~a~~~aDiVVi 75 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAA-GI---DKYPKIVGGAD-YSLLKGSEIIVV 75 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHH-TT---TCCCEEEEESC-GGGGTTCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhh-hc---CCCCEEEEeCC-HHHhCCCCEEEE
Confidence 799999999999999999999882129999999998764 222112111 11 13446777778 678999999999
Q ss_pred ccChh----------------hHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhC
Q 014700 206 AMPVQ----------------FSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALR 253 (420)
Q Consensus 206 aVp~~----------------~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg 253 (420)
+.... .++++.+.+.++ .++.+++..+|-++ .+...+.+..|
T Consensus 76 aag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~iivvsNPvd-----~~t~~~~k~~g 133 (294)
T 1oju_A 76 TAGLARKPGMTRLDLAHKNAGIIKDIAKKIVEN-APESKILVVTNPMD-----VMTYIMWKESG 133 (294)
T ss_dssp CCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTT-STTCEEEECSSSHH-----HHHHHHHHHSC
T ss_pred CCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEeCCcch-----HHHHHHHHhcC
Confidence 86421 244555666665 57888888888543 33445555433
No 131
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=98.77 E-value=6.3e-09 Score=103.56 Aligned_cols=130 Identities=18% Similarity=0.214 Sum_probs=90.2
Q ss_pred ccCCccccchh-hhchhcceeccccccccccchhhcCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH
Q 014700 91 TRDGRDRRKIV-KVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSIN 169 (420)
Q Consensus 91 ~~~~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~ 169 (420)
|+-...++.++ .|.| .|.+ ...+.++. .++|||||+|.||..+|..|...| ++|++|+|+++. ..
T Consensus 120 R~~~~~~~~~~~~g~~----~w~~---~~~~~~l~--gktvgIiGlG~IG~~vA~~l~~~G--~~V~~~d~~~~~--~~- 185 (343)
T 2yq5_A 120 RKIGEFRYRMDHDHDF----TWPS---NLISNEIY--NLTVGLIGVGHIGSAVAEIFSAMG--AKVIAYDVAYNP--EF- 185 (343)
T ss_dssp HTHHHHHHHHHHHCCC----CCCG---GGCBCCGG--GSEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSCCG--GG-
T ss_pred hchHHHHHHHHHcCCc----cccc---CCCccccC--CCeEEEEecCHHHHHHHHHHhhCC--CEEEEECCChhh--hh-
Confidence 56666777777 7766 2542 12233444 689999999999999999999887 999999998642 11
Q ss_pred HhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEccCh-hhHHHHH-HHhhhcCCCCCeEEEeccCCCcchhhhHHHH
Q 014700 170 EKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPV-QFSSSFL-EGISDYVDPGLPFISLSKGLELNTLRMMSQI 247 (420)
Q Consensus 170 ~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIlaVp~-~~l~~vl-~~i~~~l~~~~iVVs~snGi~~~t~~~~se~ 247 (420)
+. .+.. .++++++++||+|++++|. ..++.++ ++....++++.++|+++.|-..++ +.+.+.
T Consensus 186 ~~--------------~~~~-~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~-~aL~~a 249 (343)
T 2yq5_A 186 EP--------------FLTY-TDFDTVLKEADIVSLHTPLFPSTENMIGEKQLKEMKKSAYLINCARGELVDT-GALIKA 249 (343)
T ss_dssp TT--------------TCEE-CCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCH-HHHHHH
T ss_pred hc--------------cccc-cCHHHHHhcCCEEEEcCCCCHHHHHHhhHHHHhhCCCCcEEEECCCChhhhH-HHHHHH
Confidence 10 1122 2789999999999999995 3444444 345566889999999998865543 233444
Q ss_pred HHH
Q 014700 248 IPQ 250 (420)
Q Consensus 248 l~~ 250 (420)
+.+
T Consensus 250 L~~ 252 (343)
T 2yq5_A 250 LQD 252 (343)
T ss_dssp HHH
T ss_pred HHc
Confidence 443
No 132
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=98.76 E-value=4e-08 Score=83.23 Aligned_cols=98 Identities=12% Similarity=0.153 Sum_probs=67.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHh-cCCCCCCCCCCCCCceEEeCCH---HHh-ccCCc
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK-HCNCRYFPEQKLPENVIATTDA---KTA-LLGAD 201 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~-g~~~~~l~~~~l~~~i~a~td~---~ea-l~~aD 201 (420)
.|+|+|+|+|.+|..++..|.+.| ++|++++++++.++.+.+. +... +..+ .++. .++ +.++|
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g--~~v~~~d~~~~~~~~~~~~~~~~~-~~~d---------~~~~~~l~~~~~~~~d 71 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKG--HDIVLIDIDKDICKKASAEIDALV-INGD---------CTKIKTLEDAGIEDAD 71 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHCSSEE-EESC---------TTSHHHHHHTTTTTCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CeEEEEECCHHHHHHHHHhcCcEE-EEcC---------CCCHHHHHHcCcccCC
Confidence 479999999999999999999988 8999999999888877753 2110 0000 0122 222 56899
Q ss_pred EEEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCC
Q 014700 202 YCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (420)
Q Consensus 202 iVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~ 237 (420)
+||+++|.......+..+.+.++++.+|+ .+++..
T Consensus 72 ~vi~~~~~~~~~~~~~~~~~~~~~~~ii~-~~~~~~ 106 (140)
T 1lss_A 72 MYIAVTGKEEVNLMSSLLAKSYGINKTIA-RISEIE 106 (140)
T ss_dssp EEEECCSCHHHHHHHHHHHHHTTCCCEEE-ECSSTT
T ss_pred EEEEeeCCchHHHHHHHHHHHcCCCEEEE-EecCHh
Confidence 99999998765555555555566665554 455443
No 133
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=98.74 E-value=1.9e-08 Score=99.29 Aligned_cols=106 Identities=17% Similarity=0.168 Sum_probs=75.1
Q ss_pred cCCCeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEE
Q 014700 125 ERTNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (420)
Q Consensus 125 ~~~mkI~IIGaGamG~alA~~La~aG~~~-~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiV 203 (420)
+.+|||+|||+|.||.++|..|+..| + +|.++|+++++++.....-... +.....+..+..++|. +++++||+|
T Consensus 2 ~~~~kI~VIGaG~vG~~ia~~la~~g--~~~v~L~Di~~~~l~~~~~~l~~~--~~~~~~~~~i~~t~d~-~al~~aD~V 76 (322)
T 1t2d_A 2 APKAKIVLVGSGMIGGVMATLIVQKN--LGDVVLFDIVKNMPHGKALDTSHT--NVMAYSNCKVSGSNTY-DDLAGADVV 76 (322)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTT--CCEEEEECSSSSHHHHHHHHHHTH--HHHHTCCCCEEEECCG-GGGTTCSEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCC--CCeEEEEeCCHHHHHHHHHHHHhh--hhhcCCCcEEEECCCH-HHhCCCCEE
Confidence 44689999999999999999999998 5 8999999987665322210000 0000123357777888 679999999
Q ss_pred EEcc--Ch-------------------hhHHHHHHHhhhcCCCCCeEEEeccCC
Q 014700 204 LHAM--PV-------------------QFSSSFLEGISDYVDPGLPFISLSKGL 236 (420)
Q Consensus 204 IlaV--p~-------------------~~l~~vl~~i~~~l~~~~iVVs~snGi 236 (420)
|+++ |. ..++++++++.++. ++.++|..+|..
T Consensus 77 i~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~tNP~ 129 (322)
T 1t2d_A 77 IVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNC-PNAFIIVVTNPV 129 (322)
T ss_dssp EECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECSSSH
T ss_pred EEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCCh
Confidence 9998 42 13667777787776 678877778743
No 134
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=98.74 E-value=1.9e-08 Score=103.58 Aligned_cols=118 Identities=15% Similarity=0.233 Sum_probs=84.7
Q ss_pred CCeEEEEcccHH-HHHHHHHHHhc--CC-CCeEEEEeCCH--HHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCC
Q 014700 127 TNKVVVLGGGSF-GTAMAAHVANK--KS-QLKVYMLMRDP--AVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGA 200 (420)
Q Consensus 127 ~mkI~IIGaGam-G~alA~~La~a--G~-~~~V~l~~r~~--~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~a 200 (420)
.|||+|||+|.+ |.+++..|+.+ +. .++|.+||+++ ++++.++... ..+++....+..+.+++|.++++++|
T Consensus 7 ~~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~~~~e~~~~~~~~~--~~~~~~~~~~~~i~~t~D~~eal~gA 84 (450)
T 1s6y_A 7 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALA--KRMVEKAGVPIEIHLTLDRRRALDGA 84 (450)
T ss_dssp CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHH--HHHHHHTTCCCEEEEESCHHHHHTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcCCChHHHHHHHHHH--HHHHhhcCCCcEEEEeCCHHHHhCCC
Confidence 579999999999 88888888873 22 27999999999 8877654322 12223334566788888998889999
Q ss_pred cEEEEccChhh------------------------------------HHHHHHHhhhcCCCCCeEEEeccCCCcchhhhH
Q 014700 201 DYCLHAMPVQF------------------------------------SSSFLEGISDYVDPGLPFISLSKGLELNTLRMM 244 (420)
Q Consensus 201 DiVIlaVp~~~------------------------------------l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~ 244 (420)
|+||++++... +.++++.+..+- |+.+++..+|.++ .+
T Consensus 85 D~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~-P~a~ii~~tNPvd-----iv 158 (450)
T 1s6y_A 85 DFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELC-PDAWLINFTNPAG-----MV 158 (450)
T ss_dssp SEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECSSSHH-----HH
T ss_pred CEEEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHC-CCeEEEEeCCcHH-----HH
Confidence 99999998522 445556666654 6888888898653 45
Q ss_pred HHHHHHHh
Q 014700 245 SQIIPQAL 252 (420)
Q Consensus 245 se~l~~~l 252 (420)
.+.+.+..
T Consensus 159 T~a~~k~~ 166 (450)
T 1s6y_A 159 TEAVLRYT 166 (450)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhC
Confidence 56666654
No 135
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=98.68 E-value=1.3e-08 Score=100.93 Aligned_cols=120 Identities=13% Similarity=0.112 Sum_probs=86.8
Q ss_pred ccCCccccchhhhchhcceeccccccccccchhhcCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHH
Q 014700 91 TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (420)
Q Consensus 91 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~ 170 (420)
++-...++.++.|.|. |.. ...+.++. .++|+|||+|.||..+|..|...| ++|++|+|+.+.. + +
T Consensus 118 R~~~~~~~~~~~g~w~----~~~---~~~~~~l~--g~~vgIiG~G~IG~~~A~~l~~~G--~~V~~~d~~~~~~--~-~ 183 (333)
T 1dxy_A 118 RNMGKVQAQLQAGDYE----KAG---TFIGKELG--QQTVGVMGTGHIGQVAIKLFKGFG--AKVIAYDPYPMKG--D-H 183 (333)
T ss_dssp TTHHHHHHHHHTTCHH----HHT---CCCCCCGG--GSEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSCCSS--C-C
T ss_pred hhHHHHHHHHHcCCcc----ccc---CCCccCCC--CCEEEEECcCHHHHHHHHHHHHCC--CEEEEECCCcchh--h-H
Confidence 6666778888899874 411 11223444 679999999999999999999887 9999999876421 0 0
Q ss_pred hcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEccChh-hHHHHH-HHhhhcCCCCCeEEEeccCCCcc
Q 014700 171 KHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFL-EGISDYVDPGLPFISLSKGLELN 239 (420)
Q Consensus 171 ~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIlaVp~~-~l~~vl-~~i~~~l~~~~iVVs~snGi~~~ 239 (420)
. .+. ..+++++++.||+|++++|.. .++.++ ++....++++.++|+++.|-..+
T Consensus 184 ~--------------~~~-~~~l~ell~~aDvV~~~~P~~~~t~~li~~~~l~~mk~ga~lIn~srg~~vd 239 (333)
T 1dxy_A 184 P--------------DFD-YVSLEDLFKQSDVIDLHVPGIEQNTHIINEAAFNLMKPGAIVINTARPNLID 239 (333)
T ss_dssp T--------------TCE-ECCHHHHHHHCSEEEECCCCCGGGTTSBCHHHHHHSCTTEEEEECSCTTSBC
T ss_pred h--------------ccc-cCCHHHHHhcCCEEEEcCCCchhHHHHhCHHHHhhCCCCcEEEECCCCcccC
Confidence 0 012 237888899999999999964 355555 44566788999999999875444
No 136
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=98.68 E-value=1.1e-08 Score=101.42 Aligned_cols=130 Identities=12% Similarity=0.082 Sum_probs=89.9
Q ss_pred ccCCccccchhhhchhcceeccccccccccchhhcCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHH
Q 014700 91 TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (420)
Q Consensus 91 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~ 170 (420)
++-...+|.++.|.|. |.. ...+.++. .++|+|||+|.||..+|..|...| ++|++|+|+++.. + +
T Consensus 119 R~~~~~~~~~~~g~w~----~~~---~~~~~~l~--g~~vgIiG~G~IG~~~A~~l~~~G--~~V~~~d~~~~~~--~-~ 184 (331)
T 1xdw_A 119 RHTAYTTSRTAKKNFK----VDA---FMFSKEVR--NCTVGVVGLGRIGRVAAQIFHGMG--ATVIGEDVFEIKG--I-E 184 (331)
T ss_dssp TTHHHHHHHHTTTCCC----CCS---TTCCCCGG--GSEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSCCCS--C-T
T ss_pred hCHHHHHHHHHcCCCc----ccc---CcCccCCC--CCEEEEECcCHHHHHHHHHHHHCC--CEEEEECCCccHH--H-H
Confidence 6666778888888773 421 11223334 679999999999999999999887 8999999876421 1 1
Q ss_pred hcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEccChh-hHHHHH-HHhhhcCCCCCeEEEeccCCCcchhhhHHHHH
Q 014700 171 KHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPVQ-FSSSFL-EGISDYVDPGLPFISLSKGLELNTLRMMSQII 248 (420)
Q Consensus 171 ~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIlaVp~~-~l~~vl-~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l 248 (420)
. .+. ..+++++++.||+|++++|.. .++.++ ++....++++.++|+++.|-..++ +.+.+.+
T Consensus 185 ~--------------~~~-~~~l~ell~~aDvV~~~~p~t~~t~~li~~~~l~~mk~ga~lin~srg~~vd~-~aL~~aL 248 (331)
T 1xdw_A 185 D--------------YCT-QVSLDEVLEKSDIITIHAPYIKENGAVVTRDFLKKMKDGAILVNCARGQLVDT-EAVIEAV 248 (331)
T ss_dssp T--------------TCE-ECCHHHHHHHCSEEEECCCCCTTTCCSBCHHHHHTSCTTEEEEECSCGGGBCH-HHHHHHH
T ss_pred h--------------ccc-cCCHHHHHhhCCEEEEecCCchHHHHHhCHHHHhhCCCCcEEEECCCcccccH-HHHHHHH
Confidence 0 012 237888899999999999954 444444 345566889999999998754443 2344444
Q ss_pred HH
Q 014700 249 PQ 250 (420)
Q Consensus 249 ~~ 250 (420)
.+
T Consensus 249 ~~ 250 (331)
T 1xdw_A 249 ES 250 (331)
T ss_dssp HH
T ss_pred Hh
Confidence 43
No 137
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=98.67 E-value=3.5e-08 Score=96.78 Aligned_cols=92 Identities=16% Similarity=0.254 Sum_probs=71.7
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhc-CCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEE
Q 014700 126 RTNKVVVLGGGSFGTAMAAHVANK-KSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (420)
Q Consensus 126 ~~mkI~IIGaGamG~alA~~La~a-G~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVI 204 (420)
+.++|+|||+|.||.+++..|.+. |. .+|.+|+|++++.+.+.+.... .+...++++++++++|+||
T Consensus 134 ~~~~igiIG~G~~g~~~a~~l~~~~g~-~~V~v~dr~~~~~~~l~~~~~~-----------~~~~~~~~~e~v~~aDiVi 201 (312)
T 2i99_A 134 SSEVLCILGAGVQAYSHYEIFTEQFSF-KEVRIWNRTKENAEKFADTVQG-----------EVRVCSSVQEAVAGADVII 201 (312)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHCCC-SEEEEECSSHHHHHHHHHHSSS-----------CCEECSSHHHHHTTCSEEE
T ss_pred CCcEEEEECCcHHHHHHHHHHHHhCCC-cEEEEEcCCHHHHHHHHHHhhC-----------CeEEeCCHHHHHhcCCEEE
Confidence 467999999999999999999886 52 4999999999998888764210 2455678989899999999
Q ss_pred EccChhhHHHHHHHhhhcCCCCCeEEEec
Q 014700 205 HAMPVQFSSSFLEGISDYVDPGLPFISLS 233 (420)
Q Consensus 205 laVp~~~l~~vl~~i~~~l~~~~iVVs~s 233 (420)
+|+|.. +.++.. +.++++++|+++.
T Consensus 202 ~atp~~--~~v~~~--~~l~~g~~vi~~g 226 (312)
T 2i99_A 202 TVTLAT--EPILFG--EWVKPGAHINAVG 226 (312)
T ss_dssp ECCCCS--SCCBCG--GGSCTTCEEEECC
T ss_pred EEeCCC--CcccCH--HHcCCCcEEEeCC
Confidence 999953 233322 5678899988874
No 138
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=98.63 E-value=2.8e-08 Score=85.87 Aligned_cols=92 Identities=20% Similarity=0.273 Sum_probs=70.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEc
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIla 206 (420)
.+||+|||+|.||..++..|...| ++|++|+|++++.+.+.+... ..+...++++++++++|+||.|
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g--~~v~v~~r~~~~~~~~a~~~~-----------~~~~~~~~~~~~~~~~Divi~a 87 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQ--YKVTVAGRNIDHVRAFAEKYE-----------YEYVLINDIDSLIKNNDVIITA 87 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTT--CEEEEEESCHHHHHHHHHHHT-----------CEEEECSCHHHHHHTCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CEEEEEcCCHHHHHHHHHHhC-----------CceEeecCHHHHhcCCCEEEEe
Confidence 679999999999999999999887 789999999998887765421 1233456788888999999999
Q ss_pred cChhhHHHHHHHhhhcCCCCCeEEEeccC
Q 014700 207 MPVQFSSSFLEGISDYVDPGLPFISLSKG 235 (420)
Q Consensus 207 Vp~~~l~~vl~~i~~~l~~~~iVVs~snG 235 (420)
+|.... ++ -...++++.+++.+...
T Consensus 88 t~~~~~--~~--~~~~l~~g~~vid~~~p 112 (144)
T 3oj0_A 88 TSSKTP--IV--EERSLMPGKLFIDLGNP 112 (144)
T ss_dssp SCCSSC--SB--CGGGCCTTCEEEECCSS
T ss_pred CCCCCc--Ee--eHHHcCCCCEEEEccCC
Confidence 997531 11 12456778888887643
No 139
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=98.60 E-value=4.6e-08 Score=94.16 Aligned_cols=93 Identities=13% Similarity=0.184 Sum_probs=71.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEc
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIla 206 (420)
.++|+|||+|.||.+++..|.+.| ++|++|+|++++++.+.+.. ++.+.++++++++++|+||.|
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~g--~~V~v~~r~~~~~~~l~~~~-------------g~~~~~~~~~~~~~aDiVi~a 193 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKEG--AKVFLWNRTKEKAIKLAQKF-------------PLEVVNSPEEVIDKVQVIVNT 193 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHHT--CEEEEECSSHHHHHHHTTTS-------------CEEECSCGGGTGGGCSEEEEC
T ss_pred CCEEEEECchHHHHHHHHHHHHcC--CEEEEEECCHHHHHHHHHHc-------------CCeeehhHHhhhcCCCEEEEe
Confidence 579999999999999999999998 79999999998877765431 234445777778899999999
Q ss_pred cChhhHHHHHHHh-hhcCCCCCeEEEecc
Q 014700 207 MPVQFSSSFLEGI-SDYVDPGLPFISLSK 234 (420)
Q Consensus 207 Vp~~~l~~vl~~i-~~~l~~~~iVVs~sn 234 (420)
+|.....++...+ ...++++++|+++..
T Consensus 194 tp~~~~~~~~~~i~~~~l~~g~~viDv~~ 222 (275)
T 2hk9_A 194 TSVGLKDEDPEIFNYDLIKKDHVVVDIIY 222 (275)
T ss_dssp SSTTSSTTCCCSSCGGGCCTTSEEEESSS
T ss_pred CCCCCCCCCCCCCCHHHcCCCCEEEEcCC
Confidence 9976432111112 345778899998875
No 140
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=98.59 E-value=2.8e-07 Score=94.69 Aligned_cols=115 Identities=17% Similarity=0.153 Sum_probs=81.5
Q ss_pred CCeEEEEcccHH--HHHHHHHHHhcC-CCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEE
Q 014700 127 TNKVVVLGGGSF--GTAMAAHVANKK-SQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (420)
Q Consensus 127 ~mkI~IIGaGam--G~alA~~La~aG-~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiV 203 (420)
.|||+|||+|.| |..++..|+... ...+|.+||++++.++.++..+. .+.. .+.++.+++|+++++++||+|
T Consensus 5 ~~KIaVIGaGs~g~g~~la~~l~~~~~~~geV~L~Di~~e~le~~~~~~~---~l~~--~~~~I~~TtD~~eAl~dADfV 79 (450)
T 3fef_A 5 QIKIAYIGGGSQGWARSLMSDLSIDERMSGTVALYDLDFEAAQKNEVIGN---HSGN--GRWRYEAVSTLKKALSAADIV 79 (450)
T ss_dssp CEEEEEETTTCSSHHHHHHHHHHHCSSCCEEEEEECSSHHHHHHHHHHHT---TSTT--SCEEEEEESSHHHHHTTCSEE
T ss_pred CCEEEEECCChhHhHHHHHHHHHhccccCCeEEEEeCCHHHHHHHHHHHH---HHhc--cCCeEEEECCHHHHhcCCCEE
Confidence 479999999995 789999988632 11299999999988777655432 2222 556788999999999999999
Q ss_pred EEccChh--------------------------------------hHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHH
Q 014700 204 LHAMPVQ--------------------------------------FSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMS 245 (420)
Q Consensus 204 IlaVp~~--------------------------------------~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~s 245 (420)
|++++.. .+.++++.+..+ .|+.++|..+|-++ .++
T Consensus 80 I~airvG~~~~~~~De~ip~k~G~~~~vget~g~GGi~~alr~~~i~~~i~~~i~~~-~p~a~~i~~tNPvd-----i~t 153 (450)
T 3fef_A 80 IISILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIRDY-APESWVINYTNPMS-----VCT 153 (450)
T ss_dssp EECCCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEECCSSHH-----HHH
T ss_pred EeccccCCcccchhhhhhhhccCccccchhhcCCchhhcccccHHHHHHHHHHHHHH-CCCeEEEEecCchH-----HHH
Confidence 9999631 144555566554 36788888888553 344
Q ss_pred HHHHHHh
Q 014700 246 QIIPQAL 252 (420)
Q Consensus 246 e~l~~~l 252 (420)
+.+.+.+
T Consensus 154 ~~~~k~~ 160 (450)
T 3fef_A 154 RVLYKVF 160 (450)
T ss_dssp HHHHHHC
T ss_pred HHHHHHC
Confidence 4554443
No 141
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=98.54 E-value=2.8e-07 Score=80.51 Aligned_cols=99 Identities=15% Similarity=0.161 Sum_probs=67.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH-HhcCCCCCCCCCCCCCceEEeCC---HHHh-ccCCc
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSIN-EKHCNCRYFPEQKLPENVIATTD---AKTA-LLGAD 201 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~-~~g~~~~~l~~~~l~~~i~a~td---~~ea-l~~aD 201 (420)
.++|.|+|+|.||..++..|.+.| ++|++++|+++.++.+. +.+... +..+ ..+ +.++ +.++|
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g--~~V~vid~~~~~~~~~~~~~g~~~-~~~d---------~~~~~~l~~~~~~~ad 86 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSG--HSVVVVDKNEYAFHRLNSEFSGFT-VVGD---------AAEFETLKECGMEKAD 86 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCGGGGGGSCTTCCSEE-EESC---------TTSHHHHHTTTGGGCS
T ss_pred CCcEEEECCCHHHHHHHHHHHhCC--CeEEEEECCHHHHHHHHhcCCCcE-EEec---------CCCHHHHHHcCcccCC
Confidence 579999999999999999999998 89999999987665544 222100 0000 012 2222 56799
Q ss_pred EEEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCC
Q 014700 202 YCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (420)
Q Consensus 202 iVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~ 237 (420)
+||++++.......+..+...+.+...++..+++..
T Consensus 87 ~Vi~~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~~~ 122 (155)
T 2g1u_A 87 MVFAFTNDDSTNFFISMNARYMFNVENVIARVYDPE 122 (155)
T ss_dssp EEEECSSCHHHHHHHHHHHHHTSCCSEEEEECSSGG
T ss_pred EEEEEeCCcHHHHHHHHHHHHHCCCCeEEEEECCHH
Confidence 999999987655555555554445566777776554
No 142
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=98.52 E-value=8.4e-08 Score=95.12 Aligned_cols=122 Identities=18% Similarity=0.191 Sum_probs=86.2
Q ss_pred ccCCccccchhhhchhcceeccccccccccchhhcCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHH
Q 014700 91 TRDGRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (420)
Q Consensus 91 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~ 170 (420)
++-...++.++.+.|.. |. ...+.++. .++|||||.|.+|..+|..+..-| .+|..|++.... ...+
T Consensus 114 r~~~~~~~~~~~~~~~~---~~----~~~~~~l~--g~tvGIiG~G~IG~~va~~~~~fg--~~v~~~d~~~~~--~~~~ 180 (334)
T 3kb6_A 114 KRLKRIEDRVKKLNFSQ---DS----EILARELN--RLTLGVIGTGRIGSRVAMYGLAFG--MKVLCYDVVKRE--DLKE 180 (334)
T ss_dssp TTHHHHHHHHHTTCCCC---CG----GGCBCCGG--GSEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSCCH--HHHH
T ss_pred hcccccccccccccccc---cc----ccccceec--CcEEEEECcchHHHHHHHhhcccC--ceeeecCCccch--hhhh
Confidence 44455666677776654 33 22233444 679999999999999999998877 999999986542 2222
Q ss_pred hcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEccCh-hhHHHHH-HHhhhcCCCCCeEEEeccCCCcch
Q 014700 171 KHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMPV-QFSSSFL-EGISDYVDPGLPFISLSKGLELNT 240 (420)
Q Consensus 171 ~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIlaVp~-~~l~~vl-~~i~~~l~~~~iVVs~snGi~~~t 240 (420)
.+ +. ..++++.++.||+|++++|. ..++.++ ++....++++.++|+++.|-..++
T Consensus 181 ~~--------------~~-~~~l~ell~~sDivslh~Plt~~T~~li~~~~l~~mk~~a~lIN~aRG~iVde 237 (334)
T 3kb6_A 181 KG--------------CV-YTSLDELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLINTARGKVVDT 237 (334)
T ss_dssp TT--------------CE-ECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBCH
T ss_pred cC--------------ce-ecCHHHHHhhCCEEEEcCCCChhhccCcCHHHHhhcCCCeEEEecCccccccH
Confidence 22 11 23789999999999999994 4455555 334556889999999999866553
No 143
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=98.51 E-value=1.1e-06 Score=86.80 Aligned_cols=95 Identities=17% Similarity=0.262 Sum_probs=70.7
Q ss_pred cCCCeEEEEcccHHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhcc--CCc
Q 014700 125 ERTNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GAD 201 (420)
Q Consensus 125 ~~~mkI~IIGaGamG~alA~~La~aG~~~~V~-l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~--~aD 201 (420)
..++||+|||+|.||..++..|.+.. +.+|. +++++++.++.+.+.. ++...+|+++++. ++|
T Consensus 2 ~~~~rvgiiG~G~~g~~~~~~l~~~~-~~~l~av~d~~~~~~~~~a~~~-------------g~~~~~~~~~~l~~~~~D 67 (344)
T 3euw_A 2 SLTLRIALFGAGRIGHVHAANIAANP-DLELVVIADPFIEGAQRLAEAN-------------GAEAVASPDEVFARDDID 67 (344)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHCT-TEEEEEEECSSHHHHHHHHHTT-------------TCEEESSHHHHTTCSCCC
T ss_pred CCceEEEEECCcHHHHHHHHHHHhCC-CcEEEEEECCCHHHHHHHHHHc-------------CCceeCCHHHHhcCCCCC
Confidence 34679999999999999999998863 26766 7899998888776632 2356789999887 799
Q ss_pred EEEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCC
Q 014700 202 YCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (420)
Q Consensus 202 iVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~ 237 (420)
+|++|+|.....+++..... .++.|+ +-|.+.
T Consensus 68 ~V~i~tp~~~h~~~~~~al~---~gk~v~-~EKP~~ 99 (344)
T 3euw_A 68 GIVIGSPTSTHVDLITRAVE---RGIPAL-CEKPID 99 (344)
T ss_dssp EEEECSCGGGHHHHHHHHHH---TTCCEE-ECSCSC
T ss_pred EEEEeCCchhhHHHHHHHHH---cCCcEE-EECCCC
Confidence 99999999887777665544 344444 344443
No 144
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.50 E-value=4.3e-07 Score=81.34 Aligned_cols=96 Identities=17% Similarity=0.119 Sum_probs=66.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhc-CCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCC---HHHh--ccCC
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANK-KSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTD---AKTA--LLGA 200 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~a-G~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td---~~ea--l~~a 200 (420)
.++|.|+|+|.||..+|..|.+. | ++|++++++++.++.+.+.|.... ..+ .++ +.++ +.++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g--~~V~vid~~~~~~~~~~~~g~~~~-~gd---------~~~~~~l~~~~~~~~a 106 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYG--KISLGIEIREEAAQQHRSEGRNVI-SGD---------ATDPDFWERILDTGHV 106 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHC--SCEEEEESCHHHHHHHHHTTCCEE-ECC---------TTCHHHHHTBCSCCCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhccC--CeEEEEECCHHHHHHHHHCCCCEE-EcC---------CCCHHHHHhccCCCCC
Confidence 56899999999999999999998 8 899999999998888876553211 000 012 2343 5789
Q ss_pred cEEEEccChhh-HHHHHHHhhhcCCCCCeEEEeccC
Q 014700 201 DYCLHAMPVQF-SSSFLEGISDYVDPGLPFISLSKG 235 (420)
Q Consensus 201 DiVIlaVp~~~-l~~vl~~i~~~l~~~~iVVs~snG 235 (420)
|+||+++|... ...++..+. .+.++..++..+++
T Consensus 107 d~vi~~~~~~~~~~~~~~~~~-~~~~~~~ii~~~~~ 141 (183)
T 3c85_A 107 KLVLLAMPHHQGNQTALEQLQ-RRNYKGQIAAIAEY 141 (183)
T ss_dssp CEEEECCSSHHHHHHHHHHHH-HTTCCSEEEEEESS
T ss_pred CEEEEeCCChHHHHHHHHHHH-HHCCCCEEEEEECC
Confidence 99999999654 334444333 34445566655543
No 145
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=98.50 E-value=2.4e-07 Score=91.43 Aligned_cols=102 Identities=24% Similarity=0.317 Sum_probs=72.6
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHH----HHHhcCCCCCCCCCCCCCceEEeCCHHHhccCC
Q 014700 126 RTNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQS----INEKHCNCRYFPEQKLPENVIATTDAKTALLGA 200 (420)
Q Consensus 126 ~~mkI~IIGaGamG~alA~~La~aG~~~-~V~l~~r~~~~~~~----i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~a 200 (420)
.+|||+|||+|.||.++|..|+.+| + +|.+||+++++++. +..... ++ ..+..+.+++|. +++++|
T Consensus 6 ~~~kI~viGaG~vG~~~a~~l~~~~--~~~v~L~Di~~~~~~g~~~dl~~~~~---~~---~~~~~v~~t~d~-~a~~~a 76 (324)
T 3gvi_A 6 ARNKIALIGSGMIGGTLAHLAGLKE--LGDVVLFDIAEGTPQGKGLDIAESSP---VD---GFDAKFTGANDY-AAIEGA 76 (324)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CCEEEEECSSSSHHHHHHHHHHHHHH---HH---TCCCCEEEESSG-GGGTTC
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCC--CCeEEEEeCCchhHHHHHHHHhchhh---hc---CCCCEEEEeCCH-HHHCCC
Confidence 3579999999999999999999998 6 99999999876542 222100 00 123356777787 679999
Q ss_pred cEEEEccCh----------------hhHHHHHHHhhhcCCCCCeEEEeccCCC
Q 014700 201 DYCLHAMPV----------------QFSSSFLEGISDYVDPGLPFISLSKGLE 237 (420)
Q Consensus 201 DiVIlaVp~----------------~~l~~vl~~i~~~l~~~~iVVs~snGi~ 237 (420)
|+||++... ..++++++.+..+- ++.+++..+|-++
T Consensus 77 DiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~iivvtNPvd 128 (324)
T 3gvi_A 77 DVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYA-PEAFVICITNPLD 128 (324)
T ss_dssp SEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSHH
T ss_pred CEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHC-CCeEEEecCCCcH
Confidence 999999641 12455666666664 6788888888543
No 146
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=98.50 E-value=4.5e-07 Score=83.69 Aligned_cols=100 Identities=16% Similarity=0.196 Sum_probs=69.1
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHh-cCCCCCCCCCCCCCceEEeCCHHHh-ccCCcEEEE
Q 014700 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK-HCNCRYFPEQKLPENVIATTDAKTA-LLGADYCLH 205 (420)
Q Consensus 128 mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~-g~~~~~l~~~~l~~~i~a~td~~ea-l~~aDiVIl 205 (420)
|||.|+|+|.+|..+|..|.+.| ++|++++++++.++.+.+. +.. .+..+..- ...++++ +.++|+||+
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g--~~v~vid~~~~~~~~l~~~~~~~-~i~gd~~~------~~~l~~a~i~~ad~vi~ 71 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRK--YGVVIINKDRELCEEFAKKLKAT-IIHGDGSH------KEILRDAEVSKNDVVVI 71 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTT--CCEEEEESCHHHHHHHHHHSSSE-EEESCTTS------HHHHHHHTCCTTCEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHcCCe-EEEcCCCC------HHHHHhcCcccCCEEEE
Confidence 79999999999999999999998 9999999999998887653 211 01111100 0113333 678999999
Q ss_pred ccChhhHHHHHHHhhhcCCCCCeEEEeccCC
Q 014700 206 AMPVQFSSSFLEGISDYVDPGLPFISLSKGL 236 (420)
Q Consensus 206 aVp~~~l~~vl~~i~~~l~~~~iVVs~snGi 236 (420)
+++++.....+..+...+.+...+|...+..
T Consensus 72 ~~~~d~~n~~~~~~a~~~~~~~~iia~~~~~ 102 (218)
T 3l4b_C 72 LTPRDEVNLFIAQLVMKDFGVKRVVSLVNDP 102 (218)
T ss_dssp CCSCHHHHHHHHHHHHHTSCCCEEEECCCSG
T ss_pred ecCCcHHHHHHHHHHHHHcCCCeEEEEEeCc
Confidence 9998876666655555443455566655543
No 147
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=98.50 E-value=4.4e-07 Score=88.22 Aligned_cols=92 Identities=22% Similarity=0.278 Sum_probs=70.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEc
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIla 206 (420)
.++|+|||+|.||.++|..|...| .+|++|+|+++..+.+.+.+.. .....++++.++++|+|+++
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~~G--~~V~~~d~~~~~~~~~~~~g~~------------~~~~~~l~~~l~~aDvVi~~ 222 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAALG--ANVKVGARSSAHLARITEMGLV------------PFHTDELKEHVKDIDICINT 222 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHHTTCE------------EEEGGGHHHHSTTCSEEEEC
T ss_pred CCEEEEEcccHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHHCCCe------------EEchhhHHHHhhCCCEEEEC
Confidence 689999999999999999999988 8999999998776665543210 11124678888999999999
Q ss_pred cChhhHHHHHHHhhhcCCCCCeEEEeccC
Q 014700 207 MPVQFSSSFLEGISDYVDPGLPFISLSKG 235 (420)
Q Consensus 207 Vp~~~l~~vl~~i~~~l~~~~iVVs~snG 235 (420)
+|...+. ++....++++.++|++..|
T Consensus 223 ~p~~~i~---~~~~~~mk~g~~lin~a~g 248 (300)
T 2rir_A 223 IPSMILN---QTVLSSMTPKTLILDLASR 248 (300)
T ss_dssp CSSCCBC---HHHHTTSCTTCEEEECSST
T ss_pred CChhhhC---HHHHHhCCCCCEEEEEeCC
Confidence 9974332 1234567889999999865
No 148
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=98.50 E-value=5.5e-07 Score=88.17 Aligned_cols=105 Identities=16% Similarity=0.197 Sum_probs=71.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEc
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIla 206 (420)
+|||+|||+|.||..+|..|+..|. .+|.++|+++++++.....-.... ........+..++|. +++++||+||++
T Consensus 2 ~~kI~VIGaG~vG~~~a~~la~~g~-~~v~L~Di~~~~~~g~~~dl~~~~--~~~~~~~~i~~t~d~-~a~~~aD~Vi~a 77 (309)
T 1ur5_A 2 RKKISIIGAGFVGSTTAHWLAAKEL-GDIVLLDIVEGVPQGKALDLYEAS--PIEGFDVRVTGTNNY-ADTANSDVIVVT 77 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-SEEEEECSSSSHHHHHHHHHHTTH--HHHTCCCCEEEESCG-GGGTTCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC-CeEEEEeCCccHHHHHHHhHHHhH--hhcCCCeEEEECCCH-HHHCCCCEEEEc
Confidence 4799999999999999999999882 289999998866543221100000 000112356777788 678999999999
Q ss_pred cCh----------------hhHHHHHHHhhhcCCCCCeEEEeccCC
Q 014700 207 MPV----------------QFSSSFLEGISDYVDPGLPFISLSKGL 236 (420)
Q Consensus 207 Vp~----------------~~l~~vl~~i~~~l~~~~iVVs~snGi 236 (420)
+.. ..++++++.+.++. ++.+++..+|.+
T Consensus 78 ~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~tNPv 122 (309)
T 1ur5_A 78 SGAPRKPGMSREDLIKVNADITRACISQAAPLS-PNAVIIMVNNPL 122 (309)
T ss_dssp CCC--------CHHHHHHHHHHHHHHHHHGGGC-TTCEEEECCSSH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEcCCch
Confidence 732 12455666776664 678877778744
No 149
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=98.48 E-value=1.1e-07 Score=95.66 Aligned_cols=92 Identities=18% Similarity=0.184 Sum_probs=70.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEc
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIla 206 (420)
.++|||||.|.||..+|..|...| ++|.+|++..+.. ..+. . ..++++++++||+|+++
T Consensus 116 g~tvGIIGlG~IG~~vA~~l~~~G--~~V~~~d~~~~~~----~~g~--------------~-~~~l~ell~~aDvV~l~ 174 (380)
T 2o4c_A 116 ERTYGVVGAGQVGGRLVEVLRGLG--WKVLVCDPPRQAR----EPDG--------------E-FVSLERLLAEADVISLH 174 (380)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHTT--CEEEEECHHHHHH----STTS--------------C-CCCHHHHHHHCSEEEEC
T ss_pred CCEEEEEeCCHHHHHHHHHHHHCC--CEEEEEcCChhhh----ccCc--------------c-cCCHHHHHHhCCEEEEe
Confidence 679999999999999999999888 9999999865421 1110 1 13788889999999999
Q ss_pred cChhh-----HHHHH-HHhhhcCCCCCeEEEeccCCCcc
Q 014700 207 MPVQF-----SSSFL-EGISDYVDPGLPFISLSKGLELN 239 (420)
Q Consensus 207 Vp~~~-----l~~vl-~~i~~~l~~~~iVVs~snGi~~~ 239 (420)
+|... ++.++ ++....+++++++|+++.|-..+
T Consensus 175 ~Plt~~g~~~T~~li~~~~l~~mk~gailIN~sRG~vvd 213 (380)
T 2o4c_A 175 TPLNRDGEHPTRHLLDEPRLAALRPGTWLVNASRGAVVD 213 (380)
T ss_dssp CCCCSSSSSCCTTSBCHHHHHTSCTTEEEEECSCGGGBC
T ss_pred ccCccccccchhhhcCHHHHhhCCCCcEEEECCCCcccC
Confidence 99543 45555 34567788999999999875443
No 150
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=98.48 E-value=5.1e-07 Score=87.53 Aligned_cols=92 Identities=22% Similarity=0.279 Sum_probs=69.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEc
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIla 206 (420)
.++|+|||+|.||..+|..|...| .+|++|+|+++..+.+.+.|.. .....++++.++++|+|+++
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~~G--~~V~~~dr~~~~~~~~~~~g~~------------~~~~~~l~~~l~~aDvVi~~ 220 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAALG--AKVKVGARESDLLARIAEMGME------------PFHISKAAQELRDVDVCINT 220 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHHTTSE------------EEEGGGHHHHTTTCSEEEEC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCC--CEEEEEECCHHHHHHHHHCCCe------------ecChhhHHHHhcCCCEEEEC
Confidence 579999999999999999999888 8999999998776655543310 11124677888999999999
Q ss_pred cChhhHHHHHHHhhhcCCCCCeEEEeccC
Q 014700 207 MPVQFSSSFLEGISDYVDPGLPFISLSKG 235 (420)
Q Consensus 207 Vp~~~l~~vl~~i~~~l~~~~iVVs~snG 235 (420)
+|...+.+ +....++++.++|++..|
T Consensus 221 ~p~~~i~~---~~l~~mk~~~~lin~ar~ 246 (293)
T 3d4o_A 221 IPALVVTA---NVLAEMPSHTFVIDLASK 246 (293)
T ss_dssp CSSCCBCH---HHHHHSCTTCEEEECSST
T ss_pred CChHHhCH---HHHHhcCCCCEEEEecCC
Confidence 99744321 223456788999998864
No 151
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=98.48 E-value=9.2e-08 Score=96.25 Aligned_cols=93 Identities=13% Similarity=0.188 Sum_probs=70.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEc
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIla 206 (420)
.++|||||+|.||..+|..|...| ++|.+|++..+.. ..+ ....++++++++||+|+++
T Consensus 119 gktvGIIGlG~IG~~vA~~l~a~G--~~V~~~d~~~~~~----~~~---------------~~~~sl~ell~~aDiV~l~ 177 (381)
T 3oet_A 119 DRTIGIVGVGNVGSRLQTRLEALG--IRTLLCDPPRAAR----GDE---------------GDFRTLDELVQEADVLTFH 177 (381)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHTT--CEEEEECHHHHHT----TCC---------------SCBCCHHHHHHHCSEEEEC
T ss_pred CCEEEEEeECHHHHHHHHHHHHCC--CEEEEECCChHHh----ccC---------------cccCCHHHHHhhCCEEEEc
Confidence 679999999999999999999888 9999998754321 000 1124789999999999999
Q ss_pred cChh-h----HHHHH-HHhhhcCCCCCeEEEeccCCCcch
Q 014700 207 MPVQ-F----SSSFL-EGISDYVDPGLPFISLSKGLELNT 240 (420)
Q Consensus 207 Vp~~-~----l~~vl-~~i~~~l~~~~iVVs~snGi~~~t 240 (420)
+|.. . ++.++ ++....+++++++|+++.|-..++
T Consensus 178 ~Plt~~g~~~T~~li~~~~l~~mk~gailIN~aRG~vvde 217 (381)
T 3oet_A 178 TPLYKDGPYKTLHLADETLIRRLKPGAILINACRGPVVDN 217 (381)
T ss_dssp CCCCCSSTTCCTTSBCHHHHHHSCTTEEEEECSCGGGBCH
T ss_pred CcCCccccccchhhcCHHHHhcCCCCcEEEECCCCcccCH
Confidence 9943 3 44444 345566889999999998865543
No 152
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=98.46 E-value=4.5e-07 Score=74.34 Aligned_cols=96 Identities=19% Similarity=0.262 Sum_probs=66.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEc
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIla 206 (420)
+|+|+|+|+|.||..++..|.+.| .++|++++|+++..+.+...+..... . .+.-..+++++++++|+||.+
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g-~~~v~~~~r~~~~~~~~~~~~~~~~~-~------d~~~~~~~~~~~~~~d~vi~~ 76 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSS-NYSVTVADHDLAALAVLNRMGVATKQ-V------DAKDEAGLAKALGGFDAVISA 76 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCS-SEEEEEEESCHHHHHHHHTTTCEEEE-C------CTTCHHHHHHHTTTCSEEEEC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCC-CceEEEEeCCHHHHHHHHhCCCcEEE-e------cCCCHHHHHHHHcCCCEEEEC
Confidence 579999999999999999999987 37899999999888777643321100 0 000012345667899999999
Q ss_pred cChhhHHHHHHHhhhcCCCCCeEEEec
Q 014700 207 MPVQFSSSFLEGISDYVDPGLPFISLS 233 (420)
Q Consensus 207 Vp~~~l~~vl~~i~~~l~~~~iVVs~s 233 (420)
+|......+++.... .+...+.++
T Consensus 77 ~~~~~~~~~~~~~~~---~g~~~~~~~ 100 (118)
T 3ic5_A 77 APFFLTPIIAKAAKA---AGAHYFDLT 100 (118)
T ss_dssp SCGGGHHHHHHHHHH---TTCEEECCC
T ss_pred CCchhhHHHHHHHHH---hCCCEEEec
Confidence 998776666665543 355555554
No 153
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=98.45 E-value=9.7e-07 Score=86.80 Aligned_cols=102 Identities=12% Similarity=0.121 Sum_probs=65.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHh--cCCCCCCCCCCCCCceEEeCCHHHhccCCcEEE
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK--HCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~--g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVI 204 (420)
.|||+|||+|.+|.+++..|+..+...+|.++|+++++++..... +.. .++ ..+++..+..+++++||+||
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~-~~~------~~~~i~~~~~~a~~~aDvVi 79 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGL-PFM------GQMSLYAGDYSDVKDCDVIV 79 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSC-CCT------TCEEEC--CGGGGTTCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhH-Hhc------CCeEEEECCHHHhCCCCEEE
Confidence 579999999999999999999987222899999998654321111 110 111 23333323356689999999
Q ss_pred EccChhh----------------HHHHHHHhhhcCCCCCeEEEeccCC
Q 014700 205 HAMPVQF----------------SSSFLEGISDYVDPGLPFISLSKGL 236 (420)
Q Consensus 205 laVp~~~----------------l~~vl~~i~~~l~~~~iVVs~snGi 236 (420)
++++... ++++++.+.++ .++.+|+..+|-+
T Consensus 80 i~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~tNPv 126 (318)
T 1y6j_A 80 VTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKY-YNHGVILVVSNPV 126 (318)
T ss_dssp ECCCC------CHHHHHHHHHHHHHHHHHHHHHH-CCSCEEEECSSSH
T ss_pred EcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHh-CCCcEEEEecCcH
Confidence 9987422 46677777776 4677777777743
No 154
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=98.44 E-value=1.2e-06 Score=74.85 Aligned_cols=95 Identities=13% Similarity=0.105 Sum_probs=63.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHH---Hh-ccCCcE
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAK---TA-LLGADY 202 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~---ea-l~~aDi 202 (420)
+++|.|+|+|.+|..+|..|.+.| ++|++++++++.++.+.+.+.... ..+ .++.+ ++ +.++|+
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g--~~V~~id~~~~~~~~~~~~~~~~~-~gd---------~~~~~~l~~~~~~~~d~ 73 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAG--KKVLAVDKSKEKIELLEDEGFDAV-IAD---------PTDESFYRSLDLEGVSA 73 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTT--CCEEEEESCHHHHHHHHHTTCEEE-ECC---------TTCHHHHHHSCCTTCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC--CeEEEEECCHHHHHHHHHCCCcEE-ECC---------CCCHHHHHhCCcccCCE
Confidence 578999999999999999999998 999999999999888877543111 001 11222 21 468999
Q ss_pred EEEccChhhHHHHHHHhhhcCCCCCeEEEecc
Q 014700 203 CLHAMPVQFSSSFLEGISDYVDPGLPFISLSK 234 (420)
Q Consensus 203 VIlaVp~~~l~~vl~~i~~~l~~~~iVVs~sn 234 (420)
||+++++......+-.....+. ...++...+
T Consensus 74 vi~~~~~~~~n~~~~~~a~~~~-~~~iia~~~ 104 (141)
T 3llv_A 74 VLITGSDDEFNLKILKALRSVS-DVYAIVRVS 104 (141)
T ss_dssp EEECCSCHHHHHHHHHHHHHHC-CCCEEEEES
T ss_pred EEEecCCHHHHHHHHHHHHHhC-CceEEEEEc
Confidence 9999996554333333333333 333444443
No 155
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=98.44 E-value=1e-06 Score=86.20 Aligned_cols=109 Identities=17% Similarity=0.238 Sum_probs=75.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHH---HHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEE
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAV---CQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~---~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiV 203 (420)
++||+|||+|.||..+|..|+.+|...+|.++|++++. +..+... . ..++..++|+ +++++||+|
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~----------~-~~~i~~t~d~-~~l~~aD~V 81 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIF----------N-LPNVEISKDL-SASAHSKVV 81 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHH----------T-CTTEEEESCG-GGGTTCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhh----------c-CCCeEEeCCH-HHHCCCCEE
Confidence 47999999999999999999998822299999998752 1122211 0 1256777888 668999999
Q ss_pred EEcc-------------Ch--hhHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhC
Q 014700 204 LHAM-------------PV--QFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALR 253 (420)
Q Consensus 204 IlaV-------------p~--~~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg 253 (420)
|++. .. ..++++++++..+. ++.+++..+|.++ .+++.+.+..+
T Consensus 82 i~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~sNP~~-----~~t~~~~~~~~ 140 (303)
T 2i6t_A 82 IFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYS-QHSVLLVASQPVE-----IMTYVTWKLST 140 (303)
T ss_dssp EECCCC----CCHHHHHHHHHHHHHHHHHHHHHHT-TTCEEEECSSSHH-----HHHHHHHHHHC
T ss_pred EEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEcCChHH-----HHHHHHHHhcC
Confidence 9997 21 23677778887775 7888888888433 45555655533
No 156
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=98.42 E-value=1.5e-06 Score=74.71 Aligned_cols=95 Identities=12% Similarity=0.302 Sum_probs=65.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCH---HHh-ccCCcE
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDA---KTA-LLGADY 202 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~---~ea-l~~aDi 202 (420)
.++|.|+|+|.+|..+|..|.+.| ++|++++++++.++.+.+.+.... ..+. ++. +++ +.++|+
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g--~~v~vid~~~~~~~~~~~~g~~~i-~gd~---------~~~~~l~~a~i~~ad~ 74 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASD--IPLVVIETSRTRVDELRERGVRAV-LGNA---------ANEEIMQLAHLECAKW 74 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTT--CCEEEEESCHHHHHHHHHTTCEEE-ESCT---------TSHHHHHHTTGGGCSE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCC--CCEEEEECCHHHHHHHHHcCCCEE-ECCC---------CCHHHHHhcCcccCCE
Confidence 468999999999999999999998 999999999999988887553211 1110 122 221 468999
Q ss_pred EEEccChhhHH-HHHHHhhhcCCCCCeEEEecc
Q 014700 203 CLHAMPVQFSS-SFLEGISDYVDPGLPFISLSK 234 (420)
Q Consensus 203 VIlaVp~~~l~-~vl~~i~~~l~~~~iVVs~sn 234 (420)
||+++|.+..- .++..+.. +.++..+|...+
T Consensus 75 vi~~~~~~~~n~~~~~~a~~-~~~~~~iiar~~ 106 (140)
T 3fwz_A 75 LILTIPNGYEAGEIVASARA-KNPDIEIIARAH 106 (140)
T ss_dssp EEECCSCHHHHHHHHHHHHH-HCSSSEEEEEES
T ss_pred EEEECCChHHHHHHHHHHHH-HCCCCeEEEEEC
Confidence 99999976533 34443333 334555665554
No 157
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=98.40 E-value=2e-06 Score=83.44 Aligned_cols=94 Identities=10% Similarity=0.133 Sum_probs=69.4
Q ss_pred CCCeEEEEcccHHHHH-HHHHHHhcCCCCeEE-EEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEE
Q 014700 126 RTNKVVVLGGGSFGTA-MAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (420)
Q Consensus 126 ~~mkI~IIGaGamG~a-lA~~La~aG~~~~V~-l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiV 203 (420)
.++||+|||+|.||.. ++..|.+.. +.++. +++++++.++.+.+... +...+|+++++.++|+|
T Consensus 5 ~~~~igiIG~G~~g~~~~~~~l~~~~-~~~l~av~d~~~~~~~~~a~~~~-------------~~~~~~~~~ll~~~D~V 70 (308)
T 3uuw_A 5 KNIKMGMIGLGSIAQKAYLPILTKSE-RFEFVGAFTPNKVKREKICSDYR-------------IMPFDSIESLAKKCDCI 70 (308)
T ss_dssp CCCEEEEECCSHHHHHHTHHHHTSCS-SSEEEEEECSCHHHHHHHHHHHT-------------CCBCSCHHHHHTTCSEE
T ss_pred ccCcEEEEecCHHHHHHHHHHHHhCC-CeEEEEEECCCHHHHHHHHHHcC-------------CCCcCCHHHHHhcCCEE
Confidence 3579999999999996 888887743 26777 78999998888776421 11246889988899999
Q ss_pred EEccChhhHHHHHHHhhhcCCCCCeEEEeccCCC
Q 014700 204 LHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (420)
Q Consensus 204 IlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~ 237 (420)
++|+|.....+++..... .++.|+ +-|.+.
T Consensus 71 ~i~tp~~~h~~~~~~al~---~gk~vl-~EKP~~ 100 (308)
T 3uuw_A 71 FLHSSTETHYEIIKILLN---LGVHVY-VDKPLA 100 (308)
T ss_dssp EECCCGGGHHHHHHHHHH---TTCEEE-ECSSSS
T ss_pred EEeCCcHhHHHHHHHHHH---CCCcEE-EcCCCC
Confidence 999999887777665543 345444 455444
No 158
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=98.40 E-value=1.2e-06 Score=86.13 Aligned_cols=105 Identities=13% Similarity=0.064 Sum_probs=68.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEc
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIla 206 (420)
++||+|||+|.||.++|..|+..+...+|.++|++++..+.....-.. ..+ .+...+++.++..+++++||+||++
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~--~~~--~~~~~~~i~~~~~~al~~aDvViia 81 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNH--GKV--FAPKPVDIWHGDYDDCRDADLVVIC 81 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHH--HTT--SSSSCCEEEECCGGGTTTCSEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHH--Hhh--hcCCCeEEEcCcHHHhCCCCEEEEc
Confidence 579999999999999999998887435899999998754432111000 000 0111233333445679999999999
Q ss_pred cChh----------------hHHHHHHHhhhcCCCCCeEEEeccCC
Q 014700 207 MPVQ----------------FSSSFLEGISDYVDPGLPFISLSKGL 236 (420)
Q Consensus 207 Vp~~----------------~l~~vl~~i~~~l~~~~iVVs~snGi 236 (420)
.+.. ...++++.+.++. ++.+++..+|.+
T Consensus 82 ~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~~iv~tNPv 126 (316)
T 1ldn_A 82 AGANQKPGETRLDLVDKNIAIFRSIVESVMASG-FQGLFLVATNPV 126 (316)
T ss_dssp CSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHT-CCSEEEECSSSH
T ss_pred CCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHC-CCCEEEEeCCch
Confidence 6532 2455666676665 677777778744
No 159
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=98.39 E-value=1.7e-06 Score=85.21 Aligned_cols=105 Identities=18% Similarity=0.198 Sum_probs=70.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEc
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIla 206 (420)
+|||+|||+|.||.++|..|+..+.. +|.++|+++++++.....-.+...+ ...+..+..+++. +++++||+||++
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~-~v~l~Di~~~~~~g~a~dL~~~~~~--~~~~~~v~~t~d~-~a~~~aDvVIi~ 80 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLG-DVVLFDIAQGMPNGKALDLLQTCPI--EGVDFKVRGTNDY-KDLENSDVVIVT 80 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCC-EEEEECSSSSHHHHHHHHHHTTHHH--HTCCCCEEEESCG-GGGTTCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCc-eEEEEeCChHHHHHHHHHHHhhhhh--cCCCcEEEEcCCH-HHHCCCCEEEEc
Confidence 57999999999999999999998832 9999999987654222110000000 0012345656675 578999999998
Q ss_pred cCh----------------hhHHHHHHHhhhcCCCCCeEEEeccCC
Q 014700 207 MPV----------------QFSSSFLEGISDYVDPGLPFISLSKGL 236 (420)
Q Consensus 207 Vp~----------------~~l~~vl~~i~~~l~~~~iVVs~snGi 236 (420)
... ..++++++.+..+- ++.+++..+|.+
T Consensus 81 ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~vivvtNPv 125 (321)
T 3p7m_A 81 AGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNC-PNAFVICITNPL 125 (321)
T ss_dssp CSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSH
T ss_pred CCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHC-CCcEEEEecCch
Confidence 632 12455666676665 677888788754
No 160
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=98.37 E-value=2.8e-06 Score=84.16 Aligned_cols=95 Identities=15% Similarity=0.224 Sum_probs=70.5
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhcc--CCcE
Q 014700 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GADY 202 (420)
Q Consensus 126 ~~mkI~IIGaGamG~alA~~La~aG~~~~V~-l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~--~aDi 202 (420)
.++||+|||+|.||..++..|.+...+.++. +++++++.++.+.+.. ++...+|+++++. ++|+
T Consensus 12 ~~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~-------------~~~~~~~~~~ll~~~~~D~ 78 (354)
T 3q2i_A 12 RKIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERT-------------GARGHASLTDMLAQTDADI 78 (354)
T ss_dssp SCEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHH-------------CCEEESCHHHHHHHCCCSE
T ss_pred CcceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHc-------------CCceeCCHHHHhcCCCCCE
Confidence 3579999999999999999998861126765 8899999888776642 2456789998876 7999
Q ss_pred EEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCC
Q 014700 203 CLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (420)
Q Consensus 203 VIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~ 237 (420)
|++|+|.....+++..... .++.|+ +-|.+.
T Consensus 79 V~i~tp~~~h~~~~~~al~---~gk~v~-~EKP~a 109 (354)
T 3q2i_A 79 VILTTPSGLHPTQSIECSE---AGFHVM-TEKPMA 109 (354)
T ss_dssp EEECSCGGGHHHHHHHHHH---TTCEEE-ECSSSC
T ss_pred EEECCCcHHHHHHHHHHHH---CCCCEE-EeCCCc
Confidence 9999999887776655543 355554 345443
No 161
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=98.37 E-value=1.4e-06 Score=81.63 Aligned_cols=81 Identities=21% Similarity=0.292 Sum_probs=62.5
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeE-EEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhc-cCCcEEEE
Q 014700 128 NKVVVLGGGSFGTAMAAHVANKKSQLKV-YMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL-LGADYCLH 205 (420)
Q Consensus 128 mkI~IIGaGamG~alA~~La~aG~~~~V-~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal-~~aDiVIl 205 (420)
|||+|||+|.||..++..|.+.| ++| .+|++++. .+ . ..+|+++++ .++|+|++
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~g--~~lv~v~d~~~~-~~-------------------~--~~~~~~~l~~~~~DvVv~ 56 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERNG--FEIAAILDVRGE-HE-------------------K--MVRGIDEFLQREMDVAVE 56 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--CEEEEEECSSCC-CT-------------------T--EESSHHHHTTSCCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHhcCC--CEEEEEEecCcc-hh-------------------h--hcCCHHHHhcCCCCEEEE
Confidence 69999999999999999999777 887 68888741 10 0 346888888 68999999
Q ss_pred ccChhhHHHHHHHhhhcCCCCCeEEEeccC
Q 014700 206 AMPVQFSSSFLEGISDYVDPGLPFISLSKG 235 (420)
Q Consensus 206 aVp~~~l~~vl~~i~~~l~~~~iVVs~snG 235 (420)
|+|.....+++... ++.++.+++...+
T Consensus 57 ~~~~~~~~~~~~~~---l~~G~~vv~~~~~ 83 (236)
T 2dc1_A 57 AASQQAVKDYAEKI---LKAGIDLIVLSTG 83 (236)
T ss_dssp CSCHHHHHHHHHHH---HHTTCEEEESCGG
T ss_pred CCCHHHHHHHHHHH---HHCCCcEEEECcc
Confidence 99988777766544 3467788877654
No 162
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=98.36 E-value=5.5e-07 Score=85.79 Aligned_cols=90 Identities=19% Similarity=0.234 Sum_probs=67.6
Q ss_pred eEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEccC
Q 014700 129 KVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMP 208 (420)
Q Consensus 129 kI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIlaVp 208 (420)
+|+|||+|.||.+++..|.+.| ++|++|+|++++.+.+.+... .. .++++++ +++|+||+|+|
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g--~~v~v~~r~~~~~~~l~~~~~-------------~~-~~~~~~~-~~~Divi~~tp 180 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAG--LEVWVWNRTPQRALALAEEFG-------------LR-AVPLEKA-REARLLVNATR 180 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT--CCEEEECSSHHHHHHHHHHHT-------------CE-ECCGGGG-GGCSEEEECSS
T ss_pred eEEEECCcHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHHHhc-------------cc-hhhHhhc-cCCCEEEEccC
Confidence 8999999999999999999988 799999999988777765421 11 2467777 88999999999
Q ss_pred hhhHHHHHHHh-hhcCCCCCeEEEeccC
Q 014700 209 VQFSSSFLEGI-SDYVDPGLPFISLSKG 235 (420)
Q Consensus 209 ~~~l~~vl~~i-~~~l~~~~iVVs~snG 235 (420)
......+...+ .+.++++++|+++..+
T Consensus 181 ~~~~~~~~~~l~~~~l~~g~~viD~~~~ 208 (263)
T 2d5c_A 181 VGLEDPSASPLPAELFPEEGAAVDLVYR 208 (263)
T ss_dssp TTTTCTTCCSSCGGGSCSSSEEEESCCS
T ss_pred CCCCCCCCCCCCHHHcCCCCEEEEeecC
Confidence 76422110111 3567788999887654
No 163
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=98.36 E-value=2.2e-06 Score=84.95 Aligned_cols=96 Identities=15% Similarity=0.225 Sum_probs=68.9
Q ss_pred hcCCCeEEEEcccHHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhc--cCC
Q 014700 124 LERTNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL--LGA 200 (420)
Q Consensus 124 ~~~~mkI~IIGaGamG~alA~~La~aG~~~~V~-l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal--~~a 200 (420)
|+.++||+|||+|.||..++..|.+.. +++|. +++++++.++.+.+.. ++...+|+++++ .++
T Consensus 2 M~~~~~vgiiG~G~~g~~~~~~l~~~~-~~~lvav~d~~~~~~~~~~~~~-------------g~~~~~~~~~~l~~~~~ 67 (354)
T 3db2_A 2 MYNPVGVAAIGLGRWAYVMADAYTKSE-KLKLVTCYSRTEDKREKFGKRY-------------NCAGDATMEALLAREDV 67 (354)
T ss_dssp CCCCEEEEEECCSHHHHHHHHHHTTCS-SEEEEEEECSSHHHHHHHHHHH-------------TCCCCSSHHHHHHCSSC
T ss_pred CCCcceEEEEccCHHHHHHHHHHHhCC-CcEEEEEECCCHHHHHHHHHHc-------------CCCCcCCHHHHhcCCCC
Confidence 334579999999999999999998762 26755 7899999888776542 112346888888 569
Q ss_pred cEEEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCC
Q 014700 201 DYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (420)
Q Consensus 201 DiVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~ 237 (420)
|+|++|+|.....+++..... .++.|+ +-|.+.
T Consensus 68 D~V~i~tp~~~h~~~~~~al~---~gk~vl-~EKP~~ 100 (354)
T 3db2_A 68 EMVIITVPNDKHAEVIEQCAR---SGKHIY-VEKPIS 100 (354)
T ss_dssp CEEEECSCTTSHHHHHHHHHH---TTCEEE-EESSSC
T ss_pred CEEEEeCChHHHHHHHHHHHH---cCCEEE-EccCCC
Confidence 999999998877666655443 345444 445443
No 164
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=98.34 E-value=1.1e-06 Score=86.81 Aligned_cols=105 Identities=14% Similarity=0.039 Sum_probs=74.8
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHh--cCCCCCCCCCCCCCceEEeCCHHHhccCCcEE
Q 014700 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK--HCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (420)
Q Consensus 126 ~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~--g~~~~~l~~~~l~~~i~a~td~~eal~~aDiV 203 (420)
..+||+|||+|.||.++|..|+..|.-.+|.++|++++.++..... +... +.....+..++|+++ +++||+|
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~-----~~~~~~i~~t~d~~~-~~daDiV 93 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSL-----FLHTAKIVSGKDYSV-SAGSKLV 93 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGG-----GSCCSEEEEESSSCS-CSSCSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhh-----cccCCeEEEcCCHHH-hCCCCEE
Confidence 4689999999999999999999988334899999998765432211 1100 112335667778876 8999999
Q ss_pred EEccCh----------------hhHHHHHHHhhhcCCCCCeEEEeccCCC
Q 014700 204 LHAMPV----------------QFSSSFLEGISDYVDPGLPFISLSKGLE 237 (420)
Q Consensus 204 IlaVp~----------------~~l~~vl~~i~~~l~~~~iVVs~snGi~ 237 (420)
|++... ..++++++++.++ .++.+++..+|-.+
T Consensus 94 IitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~-~P~a~ilvvtNPvd 142 (330)
T 3ldh_A 94 VITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKH-SPDCLKELHPELGT 142 (330)
T ss_dssp EECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHH-CTTCEEEECSSSHH
T ss_pred EEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhh-CCCceEEeCCCccH
Confidence 998532 1356677777777 57888888888543
No 165
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=98.34 E-value=2.2e-06 Score=84.54 Aligned_cols=103 Identities=14% Similarity=0.178 Sum_probs=70.1
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHH----HHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCc
Q 014700 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQS----INEKHCNCRYFPEQKLPENVIATTDAKTALLGAD 201 (420)
Q Consensus 126 ~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~----i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aD 201 (420)
..|||+|||+|.||.++|..|+..|...+|.++|+++++++. ++.. .+ ++ ..++.+.++..+++++||
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~--~~-~~-----~~~v~i~~~~~~a~~~aD 75 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHG--KA-FA-----PQPVKTSYGTYEDCKDAD 75 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHT--GG-GS-----SSCCEEEEECGGGGTTCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhc--cc-cc-----cCCeEEEeCcHHHhCCCC
Confidence 468999999999999999999998832389999999886654 4431 11 11 112333333345789999
Q ss_pred EEEEccChh----------------hHHHHHHHhhhcCCCCCeEEEeccCCC
Q 014700 202 YCLHAMPVQ----------------FSSSFLEGISDYVDPGLPFISLSKGLE 237 (420)
Q Consensus 202 iVIlaVp~~----------------~l~~vl~~i~~~l~~~~iVVs~snGi~ 237 (420)
+||++.... .++++.+.+..+ .++.+++.++|-++
T Consensus 76 vVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~-~p~a~vlvvtNPvd 126 (326)
T 3pqe_A 76 IVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMAS-GFDGIFLVATNPVD 126 (326)
T ss_dssp EEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT-TCCSEEEECSSSHH
T ss_pred EEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHh-cCCeEEEEcCChHH
Confidence 999987421 144555666665 46788888888543
No 166
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=98.33 E-value=5.4e-07 Score=89.82 Aligned_cols=100 Identities=12% Similarity=0.213 Sum_probs=71.5
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEE
Q 014700 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (420)
Q Consensus 126 ~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIl 205 (420)
+.++|+|||+|.||.+++..|.......+|.+|+|++++++++.+.... .++ ..+...++++++++++|+|++
T Consensus 128 ~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~---~~g----~~~~~~~~~~eav~~aDiVi~ 200 (350)
T 1x7d_A 128 NARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKE---YSG----LTIRRASSVAEAVKGVDIITT 200 (350)
T ss_dssp TCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTT---CTT----CEEEECSSHHHHHTTCSEEEE
T ss_pred cCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHh---ccC----ceEEEeCCHHHHHhcCCEEEE
Confidence 4579999999999999998876431127899999999998888765211 001 124556789999999999999
Q ss_pred ccChhhHHHHHHHhhhcCCCCCeEEEecc
Q 014700 206 AMPVQFSSSFLEGISDYVDPGLPFISLSK 234 (420)
Q Consensus 206 aVp~~~l~~vl~~i~~~l~~~~iVVs~sn 234 (420)
|+|+.....++. ...+++++.|+.+..
T Consensus 201 aTps~~~~pvl~--~~~l~~G~~V~~vgs 227 (350)
T 1x7d_A 201 VTADKAYATIIT--PDMLEPGMHLNAVGG 227 (350)
T ss_dssp CCCCSSEEEEEC--GGGCCTTCEEEECSC
T ss_pred eccCCCCCceec--HHHcCCCCEEEECCC
Confidence 999753222221 256778888887753
No 167
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=98.33 E-value=1.2e-06 Score=86.20 Aligned_cols=105 Identities=21% Similarity=0.280 Sum_probs=69.4
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCC--HHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcE
Q 014700 126 RTNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRD--PAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADY 202 (420)
Q Consensus 126 ~~mkI~IIGaGamG~alA~~La~aG~~~-~V~l~~r~--~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDi 202 (420)
..+||+|||+|.||.++|..|+.+| + +|.++|++ ++.++-....-.+.. +-......+..+++. +++++||+
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~g--~~~v~l~D~~~~~~~~~g~a~dl~~~~--~~~~~~~~i~~t~d~-~a~~~aDv 81 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQKE--LADVVLVDIPQLENPTKGKALDMLEAS--PVQGFDANIIGTSDY-ADTADSDV 81 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CCEEEEECCGGGHHHHHHHHHHHHHHH--HHHTCCCCEEEESCG-GGGTTCSE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCC--CCeEEEEeccchHHHHHHhhhhHHHhh--hhccCCCEEEEcCCH-HHhCCCCE
Confidence 3579999999999999999999988 7 99999999 444332211100000 000112346666675 46899999
Q ss_pred EEEccCh----------------hhHHHHHHHhhhcCCCCCeEEEeccCC
Q 014700 203 CLHAMPV----------------QFSSSFLEGISDYVDPGLPFISLSKGL 236 (420)
Q Consensus 203 VIlaVp~----------------~~l~~vl~~i~~~l~~~~iVVs~snGi 236 (420)
||++... ..++++.+.+.++ .++.+++..+|..
T Consensus 82 VIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~vlvvsNPv 130 (315)
T 3tl2_A 82 VVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKH-SPNAIIVVLTNPV 130 (315)
T ss_dssp EEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEECCSSH
T ss_pred EEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEECCChH
Confidence 9999731 1245566666665 4678888888744
No 168
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=98.33 E-value=4.7e-06 Score=81.71 Aligned_cols=91 Identities=16% Similarity=0.231 Sum_probs=68.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhcc--CCcEE
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GADYC 203 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~-l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~--~aDiV 203 (420)
++||+|||+|.||..++..|.+.. +.+|. +++++++.++.+.+.. ++. .+|+++++. ++|+|
T Consensus 3 ~~~vgiiG~G~~g~~~~~~l~~~~-~~~l~av~d~~~~~~~~~~~~~-------------~~~-~~~~~~~l~~~~~D~V 67 (331)
T 4hkt_A 3 TVRFGLLGAGRIGKVHAKAVSGNA-DARLVAVADAFPAAAEAIAGAY-------------GCE-VRTIDAIEAAADIDAV 67 (331)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCT-TEEEEEEECSSHHHHHHHHHHT-------------TCE-ECCHHHHHHCTTCCEE
T ss_pred ceEEEEECCCHHHHHHHHHHhhCC-CcEEEEEECCCHHHHHHHHHHh-------------CCC-cCCHHHHhcCCCCCEE
Confidence 579999999999999999998863 27776 7899999888877642 233 568888876 79999
Q ss_pred EEccChhhHHHHHHHhhhcCCCCCeEEEeccCC
Q 014700 204 LHAMPVQFSSSFLEGISDYVDPGLPFISLSKGL 236 (420)
Q Consensus 204 IlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi 236 (420)
++|+|.....+++..... .++.|+ +-|.+
T Consensus 68 ~i~tp~~~h~~~~~~al~---~gk~v~-~EKP~ 96 (331)
T 4hkt_A 68 VICTPTDTHADLIERFAR---AGKAIF-CEKPI 96 (331)
T ss_dssp EECSCGGGHHHHHHHHHH---TTCEEE-ECSCS
T ss_pred EEeCCchhHHHHHHHHHH---cCCcEE-EecCC
Confidence 999999887777665544 344444 34443
No 169
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=98.31 E-value=8.4e-07 Score=76.77 Aligned_cols=84 Identities=11% Similarity=0.176 Sum_probs=63.3
Q ss_pred CCCeEEEEcc----cHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCc
Q 014700 126 RTNKVVVLGG----GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGAD 201 (420)
Q Consensus 126 ~~mkI~IIGa----GamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aD 201 (420)
..++|+|||+ |.||..++..|.+.| ++|+.++++.+. + .++.+..+++|+.+.+|
T Consensus 13 ~p~~IavIGaS~~~g~~G~~~~~~L~~~G--~~V~~vnp~~~~---i----------------~G~~~~~s~~el~~~vD 71 (138)
T 1y81_A 13 EFRKIALVGASKNPAKYGNIILKDLLSKG--FEVLPVNPNYDE---I----------------EGLKCYRSVRELPKDVD 71 (138)
T ss_dssp -CCEEEEETCCSCTTSHHHHHHHHHHHTT--CEEEEECTTCSE---E----------------TTEECBSSGGGSCTTCC
T ss_pred CCCeEEEEeecCCCCCHHHHHHHHHHHCC--CEEEEeCCCCCe---E----------------CCeeecCCHHHhCCCCC
Confidence 3579999999 999999999999988 886666654311 1 13456668888777899
Q ss_pred EEEEccChhhHHHHHHHhhhcCCCCCeEEE
Q 014700 202 YCLHAMPVQFSSSFLEGISDYVDPGLPFIS 231 (420)
Q Consensus 202 iVIlaVp~~~l~~vl~~i~~~l~~~~iVVs 231 (420)
++++++|...+.++++++.. ...+.+++.
T Consensus 72 lvii~vp~~~v~~v~~~~~~-~g~~~i~~~ 100 (138)
T 1y81_A 72 VIVFVVPPKVGLQVAKEAVE-AGFKKLWFQ 100 (138)
T ss_dssp EEEECSCHHHHHHHHHHHHH-TTCCEEEEC
T ss_pred EEEEEeCHHHHHHHHHHHHH-cCCCEEEEc
Confidence 99999999999999988766 334444443
No 170
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=98.31 E-value=4.4e-06 Score=82.40 Aligned_cols=93 Identities=17% Similarity=0.139 Sum_probs=68.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhcc--CCcEE
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GADYC 203 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~-l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~--~aDiV 203 (420)
++||+|||+|.||..++..|.+.. +.++. +++++++.++.+.+.... ....+|+++++. ++|+|
T Consensus 2 ~~rvgiIG~G~~g~~~~~~l~~~~-~~~l~av~d~~~~~~~~~~~~~~~------------~~~~~~~~~ll~~~~~D~V 68 (344)
T 3ezy_A 2 SLRIGVIGLGRIGTIHAENLKMID-DAILYAISDVREDRLREMKEKLGV------------EKAYKDPHELIEDPNVDAV 68 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHGGGST-TEEEEEEECSCHHHHHHHHHHHTC------------SEEESSHHHHHHCTTCCEE
T ss_pred eeEEEEEcCCHHHHHHHHHHHhCC-CcEEEEEECCCHHHHHHHHHHhCC------------CceeCCHHHHhcCCCCCEE
Confidence 579999999999999999998753 26766 789999888877664210 145678988877 79999
Q ss_pred EEccChhhHHHHHHHhhhcCCCCCeEEEeccCC
Q 014700 204 LHAMPVQFSSSFLEGISDYVDPGLPFISLSKGL 236 (420)
Q Consensus 204 IlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi 236 (420)
++|+|.....+++..... .++.|+ +-|.+
T Consensus 69 ~i~tp~~~h~~~~~~al~---~gk~v~-~EKP~ 97 (344)
T 3ezy_A 69 LVCSSTNTHSELVIACAK---AKKHVF-CEKPL 97 (344)
T ss_dssp EECSCGGGHHHHHHHHHH---TTCEEE-EESCS
T ss_pred EEcCCCcchHHHHHHHHh---cCCeEE-EECCC
Confidence 999999887776665543 345444 44544
No 171
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=98.28 E-value=3.2e-06 Score=83.01 Aligned_cols=103 Identities=18% Similarity=0.212 Sum_probs=68.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHH--hcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEE
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE--KHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~--~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVI 204 (420)
.|||+|||+|.+|.+++..|+..+...+|.++|+++++++.... .+. ..++ ...+.+..+..+++++||+||
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~-~~~~-----~~~~~v~~~~~~a~~~aDvVv 79 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHA-TPYS-----PTTVRVKAGEYSDCHDADLVV 79 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHH-GGGS-----SSCCEEEECCGGGGTTCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhh-hhhc-----CCCeEEEeCCHHHhCCCCEEE
Confidence 47999999999999999999988733489999999865543111 111 1111 112233334467799999999
Q ss_pred EccChh----------------hHHHHHHHhhhcCCCCCeEEEeccCC
Q 014700 205 HAMPVQ----------------FSSSFLEGISDYVDPGLPFISLSKGL 236 (420)
Q Consensus 205 laVp~~----------------~l~~vl~~i~~~l~~~~iVVs~snGi 236 (420)
++++.. .++++.+.+.++ .++.+++..+|-+
T Consensus 80 i~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~tNPv 126 (317)
T 3d0o_A 80 ICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMAS-KFDGIFLVATNPV 126 (317)
T ss_dssp ECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT-TCCSEEEECSSSH
T ss_pred ECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEecCcH
Confidence 998531 245566666666 5677777787744
No 172
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=98.27 E-value=2.2e-06 Score=83.83 Aligned_cols=103 Identities=15% Similarity=0.182 Sum_probs=70.1
Q ss_pred eEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEccC
Q 014700 129 KVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAMP 208 (420)
Q Consensus 129 kI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIlaVp 208 (420)
||+|||+|.||.++|..|+.++. .+|.++|+++++++.....-...... ...+..+..++|. +++++||+||++.+
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l-~el~L~Di~~~~~~g~~~dl~~~~~~--~~~~~~i~~t~d~-~a~~~aD~Vi~~ag 76 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGY-DDLLLIARTPGKPQGEALDLAHAAAE--LGVDIRISGSNSY-EDMRGSDIVLVTAG 76 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTC-SCEEEECSSTTHHHHHHHHHHHHHHH--HTCCCCEEEESCG-GGGTTCSEEEECCS
T ss_pred CEEEECcCHHHHHHHHHHHhCCC-CEEEEEcCChhhHHHHHHHHHHhhhh--cCCCeEEEECCCH-HHhCCCCEEEEeCC
Confidence 79999999999999999998873 37999999987654321110000000 0012346666787 57999999999965
Q ss_pred hhh----------------HHHHHHHhhhcCCCCCeEEEeccCC
Q 014700 209 VQF----------------SSSFLEGISDYVDPGLPFISLSKGL 236 (420)
Q Consensus 209 ~~~----------------l~~vl~~i~~~l~~~~iVVs~snGi 236 (420)
... ++++++++.++. ++..+|..+|.+
T Consensus 77 ~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~tNPv 119 (308)
T 2d4a_B 77 IGRKPGMTREQLLEANANTMADLAEKIKAYA-KDAIVVITTNPV 119 (308)
T ss_dssp CCCCSSCCTHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSH
T ss_pred CCCCCCCcHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeCCch
Confidence 322 667777777764 677777788844
No 173
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=98.26 E-value=2.8e-06 Score=83.55 Aligned_cols=105 Identities=13% Similarity=0.118 Sum_probs=70.4
Q ss_pred cCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHh--cCCCCCCCCCCCCCceEEeCCHHHhccCCcE
Q 014700 125 ERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK--HCNCRYFPEQKLPENVIATTDAKTALLGADY 202 (420)
Q Consensus 125 ~~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~--g~~~~~l~~~~l~~~i~a~td~~eal~~aDi 202 (420)
...|||+|||+|.+|.+++..|+..+...+|.++|+++++++..... +.. .++ ..+++..+..+++++||+
T Consensus 3 ~~~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~-~~~------~~~~v~~~~~~a~~~aDv 75 (318)
T 1ez4_A 3 PNHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQ-AFT------APKKIYSGEYSDCKDADL 75 (318)
T ss_dssp TTBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGG-GGS------CCCEEEECCGGGGTTCSE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHH-Hhc------CCeEEEECCHHHhCCCCE
Confidence 34589999999999999999999887333899999998766532211 111 111 123333344677999999
Q ss_pred EEEccChh----------------hHHHHHHHhhhcCCCCCeEEEeccCCC
Q 014700 203 CLHAMPVQ----------------FSSSFLEGISDYVDPGLPFISLSKGLE 237 (420)
Q Consensus 203 VIlaVp~~----------------~l~~vl~~i~~~l~~~~iVVs~snGi~ 237 (420)
||++.+.. .++++.+.+..+ .++.+++..+|-++
T Consensus 76 Vii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~tNPv~ 125 (318)
T 1ez4_A 76 VVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDS-GFDGIFLVAANPVD 125 (318)
T ss_dssp EEECCCC----------CHHHHHHHHHHHHHHHHHT-TCCSEEEECSSSHH
T ss_pred EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEeCCcHH
Confidence 99997532 244555666665 46777777887543
No 174
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=98.26 E-value=3.5e-06 Score=82.78 Aligned_cols=95 Identities=14% Similarity=0.038 Sum_probs=68.6
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhcc--CCcE
Q 014700 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GADY 202 (420)
Q Consensus 126 ~~mkI~IIGaGamG~alA~~La~aG~~~~V~-l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~--~aDi 202 (420)
.++||+|||+|.||..++..|.+.. +.+|. +++++++.++.+.+.... ..+++|+++++. ++|+
T Consensus 4 ~~~~igiiG~G~~g~~~~~~l~~~~-~~~l~av~d~~~~~~~~~~~~~~~------------~~~~~~~~~ll~~~~~D~ 70 (330)
T 3e9m_A 4 DKIRYGIMSTAQIVPRFVAGLRESA-QAEVRGIASRRLENAQKMAKELAI------------PVAYGSYEELCKDETIDI 70 (330)
T ss_dssp CCEEEEECSCCTTHHHHHHHHHHSS-SEEEEEEBCSSSHHHHHHHHHTTC------------CCCBSSHHHHHHCTTCSE
T ss_pred CeEEEEEECchHHHHHHHHHHHhCC-CcEEEEEEeCCHHHHHHHHHHcCC------------CceeCCHHHHhcCCCCCE
Confidence 3579999999999999999998853 26766 789999888877765311 034568888876 7899
Q ss_pred EEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCC
Q 014700 203 CLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (420)
Q Consensus 203 VIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~ 237 (420)
|++|+|.....+++..... .++.|+ +-|.+.
T Consensus 71 V~i~tp~~~h~~~~~~al~---~gk~vl-~EKP~~ 101 (330)
T 3e9m_A 71 IYIPTYNQGHYSAAKLALS---QGKPVL-LEKPFT 101 (330)
T ss_dssp EEECCCGGGHHHHHHHHHH---TTCCEE-ECSSCC
T ss_pred EEEcCCCHHHHHHHHHHHH---CCCeEE-EeCCCC
Confidence 9999999887776665543 344443 345443
No 175
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=98.26 E-value=5.5e-06 Score=82.28 Aligned_cols=103 Identities=20% Similarity=0.259 Sum_probs=72.6
Q ss_pred cCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHH----HHHhcCCCCCCCCCCCCCceEEeCCHHHhccC
Q 014700 125 ERTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQS----INEKHCNCRYFPEQKLPENVIATTDAKTALLG 199 (420)
Q Consensus 125 ~~~mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r~~~~~~~----i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~ 199 (420)
+.++||+|||+ |.+|+++|..|+..|...+|.++|+++++++. +... . ++ ..++..+++..+++++
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~-~----~~----~~~i~~t~d~~~al~d 76 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHC-G----FE----GLNLTFTSDIKEALTD 76 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHH-C----CT----TCCCEEESCHHHHHTT
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhC-c----CC----CCceEEcCCHHHHhCC
Confidence 34689999998 99999999999988744589999999876543 3331 1 11 1256777888888999
Q ss_pred CcEEEEccCh----------------hhHHHHHHHhhhcCCCCCe-EEEeccCCC
Q 014700 200 ADYCLHAMPV----------------QFSSSFLEGISDYVDPGLP-FISLSKGLE 237 (420)
Q Consensus 200 aDiVIlaVp~----------------~~l~~vl~~i~~~l~~~~i-VVs~snGi~ 237 (420)
||+||++.-. ..++++.+.+..+- ++.+ ++.++|-++
T Consensus 77 ADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~-p~a~~vlvvsNPvd 130 (343)
T 3fi9_A 77 AKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYC-PDCKHVIIIFNPAD 130 (343)
T ss_dssp EEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHC-TTCCEEEECSSSHH
T ss_pred CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhc-cCcEEEEEecCchH
Confidence 9999998521 12445556666665 5664 777787543
No 176
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=98.25 E-value=2.5e-06 Score=80.74 Aligned_cols=127 Identities=15% Similarity=0.205 Sum_probs=81.6
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEE
Q 014700 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (420)
Q Consensus 126 ~~mkI~IIGaGamG~alA~~La~aG~~~~V~-l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVI 204 (420)
.||||+|+|+|.||..++..+.+.+ +++. +++++.+. .. ++.+++|+++++ ++|+||
T Consensus 2 ~MmkI~ViGaGrMG~~i~~~l~~~~--~eLva~~d~~~~~-----~~--------------gv~v~~dl~~l~-~~DVvI 59 (243)
T 3qy9_A 2 ASMKILLIGYGAMNQRVARLAEEKG--HEIVGVIENTPKA-----TT--------------PYQQYQHIADVK-GADVAI 59 (243)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTT--CEEEEEECSSCC-------C--------------CSCBCSCTTTCT-TCSEEE
T ss_pred CceEEEEECcCHHHHHHHHHHHhCC--CEEEEEEecCccc-----cC--------------CCceeCCHHHHh-CCCEEE
Confidence 3689999999999999999999987 4655 46776541 11 234556787766 999999
Q ss_pred EccChhhHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCeEEEECcccHHHHhhcCCeEEEEecC
Q 014700 205 HAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVASK 284 (420)
Q Consensus 205 laVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~~vl~GP~~a~ev~~g~~t~i~ia~~ 284 (420)
-++.+..+.+.++ ++.+..+|..+.|+..+.. +.+.+... ...++..|++...+..
T Consensus 60 Dft~p~a~~~~~~-----l~~g~~vVigTTG~s~e~~----~~l~~aa~----~~~v~~a~N~S~Gv~l----------- 115 (243)
T 3qy9_A 60 DFSNPNLLFPLLD-----EDFHLPLVVATTGEKEKLL----NKLDELSQ----NMPVFFSANMSYGVHA----------- 115 (243)
T ss_dssp ECSCHHHHHHHHT-----SCCCCCEEECCCSSHHHHH----HHHHHHTT----TSEEEECSSCCHHHHH-----------
T ss_pred EeCChHHHHHHHH-----HhcCCceEeCCCCCCHHHH----HHHHHHHh----cCCEEEECCccHHHHH-----------
Confidence 5555554444443 5667777777888865432 23334321 2467889998764311
Q ss_pred CHHHHHHHHHHHhc
Q 014700 285 DRKLANAVQQLLAS 298 (420)
Q Consensus 285 d~e~~~~l~~ll~~ 298 (420)
--+.++++.++|..
T Consensus 116 ~~~~~~~aa~~l~~ 129 (243)
T 3qy9_A 116 LTKILAAAVPLLDD 129 (243)
T ss_dssp HHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHhcCC
Confidence 02455667777765
No 177
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=98.25 E-value=8.9e-06 Score=79.49 Aligned_cols=93 Identities=13% Similarity=0.126 Sum_probs=68.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhc-cCCcEEE
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL-LGADYCL 204 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~-l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal-~~aDiVI 204 (420)
|+||+|||+|.||..++..|.+.+ +.++. +++++++..+.+.+... .....+|+++++ .++|+|+
T Consensus 1 ~~~vgiiG~G~~g~~~~~~l~~~~-~~~~~~v~d~~~~~~~~~~~~~~------------~~~~~~~~~~~l~~~~D~V~ 67 (325)
T 2ho3_A 1 MLKLGVIGTGAISHHFIEAAHTSG-EYQLVAIYSRKLETAATFASRYQ------------NIQLFDQLEVFFKSSFDLVY 67 (325)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTT-SEEEEEEECSSHHHHHHHGGGSS------------SCEEESCHHHHHTSSCSEEE
T ss_pred CeEEEEEeCCHHHHHHHHHHHhCC-CeEEEEEEeCCHHHHHHHHHHcC------------CCeEeCCHHHHhCCCCCEEE
Confidence 479999999999999999998764 26654 78999988776655310 124567898888 7899999
Q ss_pred EccChhhHHHHHHHhhhcCCCCCeEEEeccCC
Q 014700 205 HAMPVQFSSSFLEGISDYVDPGLPFISLSKGL 236 (420)
Q Consensus 205 laVp~~~l~~vl~~i~~~l~~~~iVVs~snGi 236 (420)
+|+|.....+++..... .++.|++ -|.+
T Consensus 68 i~tp~~~h~~~~~~al~---~gk~V~~-EKP~ 95 (325)
T 2ho3_A 68 IASPNSLHFAQAKAALS---AGKHVIL-EKPA 95 (325)
T ss_dssp ECSCGGGHHHHHHHHHH---TTCEEEE-ESSC
T ss_pred EeCChHHHHHHHHHHHH---cCCcEEE-ecCC
Confidence 99999887777665543 4555543 4544
No 178
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=98.24 E-value=4.1e-06 Score=70.89 Aligned_cols=96 Identities=11% Similarity=0.166 Sum_probs=61.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCH---HHh-ccCCcE
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDA---KTA-LLGADY 202 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~---~ea-l~~aDi 202 (420)
+++|.|+|+|.+|..++..|.+.| ++|++++++++..+.+.+.+... ...+ .++. +++ +.++|+
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g--~~v~~~d~~~~~~~~~~~~~~~~-~~~d---------~~~~~~l~~~~~~~~d~ 73 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMG--HEVLAVDINEEKVNAYASYATHA-VIAN---------ATEENELLSLGIRNFEY 73 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTT--CCCEEEESCHHHHHTTTTTCSEE-EECC---------TTCHHHHHTTTGGGCSE
T ss_pred CCcEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHhCCEE-EEeC---------CCCHHHHHhcCCCCCCE
Confidence 468999999999999999999998 89999999988766554432110 0000 0122 222 567999
Q ss_pred EEEccChh-hHHHHHHHhhhcCCCCCeEEEeccC
Q 014700 203 CLHAMPVQ-FSSSFLEGISDYVDPGLPFISLSKG 235 (420)
Q Consensus 203 VIlaVp~~-~l~~vl~~i~~~l~~~~iVVs~snG 235 (420)
||++++.. .....+......+.+. .++..+++
T Consensus 74 vi~~~~~~~~~~~~~~~~~~~~~~~-~ii~~~~~ 106 (144)
T 2hmt_A 74 VIVAIGANIQASTLTTLLLKELDIP-NIWVKAQN 106 (144)
T ss_dssp EEECCCSCHHHHHHHHHHHHHTTCS-EEEEECCS
T ss_pred EEECCCCchHHHHHHHHHHHHcCCC-eEEEEeCC
Confidence 99999964 3322233333334444 45555554
No 179
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=98.24 E-value=1e-05 Score=79.83 Aligned_cols=95 Identities=14% Similarity=0.086 Sum_probs=69.4
Q ss_pred CCeEEEEcccHHHHHHHHHHH-hcCCCCeEE-EEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccC--CcE
Q 014700 127 TNKVVVLGGGSFGTAMAAHVA-NKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLG--ADY 202 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La-~aG~~~~V~-l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~--aDi 202 (420)
++||+|||+|.||..++..|. +.. +.+|. +++++++.++.+.+... ....+.+|+++++.+ +|+
T Consensus 2 ~~rigiIG~G~~g~~~~~~l~~~~~-~~~l~av~d~~~~~~~~~~~~~g-----------~~~~~~~~~~~ll~~~~~D~ 69 (344)
T 3mz0_A 2 SLRIGVIGTGAIGKEHINRITNKLS-GAEIVAVTDVNQEAAQKVVEQYQ-----------LNATVYPNDDSLLADENVDA 69 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTCS-SEEEEEEECSSHHHHHHHHHHTT-----------CCCEEESSHHHHHHCTTCCE
T ss_pred eEEEEEECccHHHHHHHHHHHhhCC-CcEEEEEEcCCHHHHHHHHHHhC-----------CCCeeeCCHHHHhcCCCCCE
Confidence 469999999999999999998 432 26766 78999998888776421 013567899998765 899
Q ss_pred EEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCC
Q 014700 203 CLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (420)
Q Consensus 203 VIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~ 237 (420)
|++|+|.....+++..... .++.|+ +-|.+.
T Consensus 70 V~i~tp~~~h~~~~~~al~---~Gk~vl-~EKP~a 100 (344)
T 3mz0_A 70 VLVTSWGPAHESSVLKAIK---AQKYVF-CEKPLA 100 (344)
T ss_dssp EEECSCGGGHHHHHHHHHH---TTCEEE-ECSCSC
T ss_pred EEECCCchhHHHHHHHHHH---CCCcEE-EcCCCC
Confidence 9999999887777665543 455444 455444
No 180
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=98.22 E-value=3.2e-06 Score=83.03 Aligned_cols=102 Identities=22% Similarity=0.297 Sum_probs=67.7
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHH----HHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEE
Q 014700 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQ----SINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (420)
Q Consensus 128 mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~----~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiV 203 (420)
|||+|||+|.||.++|..|+..|...+|.++|+++++++ .+..... +. ..+..+..+++ .+++++||+|
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~---~~---~~~~~v~~~~~-~~a~~~aDvV 73 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSP---IH---GFDTRVTGTND-YGPTEDSDVC 73 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHH---HH---TCCCEEEEESS-SGGGTTCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhcccc---cc---CCCcEEEECCC-HHHhCCCCEE
Confidence 799999999999999999999873239999999887654 2222100 00 00112343444 4668999999
Q ss_pred EEccChh----------------hHHHHHHHhhhcCCCCCeEEEeccCCC
Q 014700 204 LHAMPVQ----------------FSSSFLEGISDYVDPGLPFISLSKGLE 237 (420)
Q Consensus 204 IlaVp~~----------------~l~~vl~~i~~~l~~~~iVVs~snGi~ 237 (420)
|++.... .++++.+.+..+ .++.+++..+|-++
T Consensus 74 ii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~vivvtNPvd 122 (314)
T 3nep_X 74 IITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEG-SPDSTIIVVANPLD 122 (314)
T ss_dssp EECCCC-------CHHHHHHHHHHHHHHHHHHHTT-CTTCEEEECCSSHH
T ss_pred EECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHh-CCCcEEEecCCchh
Confidence 9987531 134555566665 46788888888543
No 181
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=98.21 E-value=8.5e-06 Score=80.36 Aligned_cols=115 Identities=10% Similarity=0.052 Sum_probs=75.7
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHh--cCCCCCCCCCCCCCceEEeCCHHHhccCCcEE
Q 014700 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK--HCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (420)
Q Consensus 126 ~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~--g~~~~~l~~~~l~~~i~a~td~~eal~~aDiV 203 (420)
..|||+|||+|.||.++|..|+..|...+|.++|+++++++-.... +... ++ .++.++++..+++++||+|
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~-~~------~~~~i~~~~~~a~~~aDiV 80 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALP-FT------SPKKIYSAEYSDAKDADLV 80 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGG-GS------CCCEEEECCGGGGTTCSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhh-hc------CCcEEEECcHHHhcCCCEE
Confidence 4689999999999999999999987323899999998766533221 1111 11 1344444445678999999
Q ss_pred EEccChh----------------hHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhC
Q 014700 204 LHAMPVQ----------------FSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALR 253 (420)
Q Consensus 204 IlaVp~~----------------~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg 253 (420)
|++.... .++++.+.+..+- ++.+++..+|-++ .+++.+.+..+
T Consensus 81 vi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~-p~a~ilvvtNPvd-----i~t~~~~k~~g 140 (326)
T 3vku_A 81 VITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSG-FNGIFLVAANPVD-----ILTYATWKLSG 140 (326)
T ss_dssp EECCCCC----------------CHHHHHHHHHTTT-CCSEEEECSSSHH-----HHHHHHHHHHC
T ss_pred EECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEccCchH-----HHHHHHHHhcC
Confidence 9986421 2455666666654 6788888888543 34445554433
No 182
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=98.20 E-value=4.7e-06 Score=82.37 Aligned_cols=118 Identities=12% Similarity=0.141 Sum_probs=78.1
Q ss_pred hcCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHh--cCCCCCCCCCCCCCceEEeCCHHHhccCCc
Q 014700 124 LERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK--HCNCRYFPEQKLPENVIATTDAKTALLGAD 201 (420)
Q Consensus 124 ~~~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~--g~~~~~l~~~~l~~~i~a~td~~eal~~aD 201 (420)
....+||+|||+|.||.++|..|+..|...+|.++|+++++++..... +... +.....+..++|.+ ++++||
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~-----~~~~~~i~~~~d~~-~~~~aD 89 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSL-----FLKTPKIVSSKDYS-VTANSK 89 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGG-----GCSCCEEEECSSGG-GGTTEE
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhh-----ccCCCeEEEcCCHH-HhCCCC
Confidence 445789999999999999999999987334899999998765442211 1110 11122455567776 589999
Q ss_pred EEEEccCh----------------hhHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhC
Q 014700 202 YCLHAMPV----------------QFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALR 253 (420)
Q Consensus 202 iVIlaVp~----------------~~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg 253 (420)
+||++.-. ..++++.+.+..+ .++.+++.++|.++ .+...+.+..+
T Consensus 90 iVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~-~p~a~vlvvtNPvd-----i~t~~~~k~sg 151 (331)
T 4aj2_A 90 LVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKY-SPQCKLLIVSNPVD-----ILTYVAWKISG 151 (331)
T ss_dssp EEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTCEEEECSSSHH-----HHHHHHHHHHC
T ss_pred EEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEecChHH-----HHHHHHHHHhC
Confidence 99998531 1255666677776 57888888888543 33444554433
No 183
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=98.20 E-value=5.2e-06 Score=81.28 Aligned_cols=101 Identities=22% Similarity=0.217 Sum_probs=68.6
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHh--cCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEE
Q 014700 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK--HCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (420)
Q Consensus 128 mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~--g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIl 205 (420)
|||+|||+|.+|.+++..|+..+...+|.++|+++++++..... +.. .++ .+..+.. ++ .+++++||+||+
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~-~~~----~~~~v~~-~~-~~a~~~aD~Vii 73 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHAT-PFA----HPVWVWA-GS-YGDLEGARAVVL 73 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTG-GGS----CCCEEEE-CC-GGGGTTEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhH-hhc----CCeEEEE-CC-HHHhCCCCEEEE
Confidence 69999999999999999999876445899999998766532221 111 111 1223343 34 567999999999
Q ss_pred ccChh----------------hHHHHHHHhhhcCCCCCeEEEeccCC
Q 014700 206 AMPVQ----------------FSSSFLEGISDYVDPGLPFISLSKGL 236 (420)
Q Consensus 206 aVp~~----------------~l~~vl~~i~~~l~~~~iVVs~snGi 236 (420)
+.+.. .++++.+.+.++ .++.+++..+|.+
T Consensus 74 ~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~tNPv 119 (310)
T 2xxj_A 74 AAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEA-APEAVLLVATNPV 119 (310)
T ss_dssp CCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEECSSSH
T ss_pred CCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHH-CCCcEEEEecCch
Confidence 87521 245555666666 4677777788854
No 184
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=98.19 E-value=1.3e-05 Score=79.51 Aligned_cols=94 Identities=13% Similarity=0.134 Sum_probs=68.8
Q ss_pred CCCeEEEEcccHHHH-HHHHHHHhcCCCCeEE-EEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhcc--CCc
Q 014700 126 RTNKVVVLGGGSFGT-AMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GAD 201 (420)
Q Consensus 126 ~~mkI~IIGaGamG~-alA~~La~aG~~~~V~-l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~--~aD 201 (420)
.++||+|||+|.||. .++..|.+.. +.+|. +++++++.++.+.+.. ++...+|+++++. +.|
T Consensus 26 ~~~rigiIG~G~~g~~~~~~~l~~~~-~~~l~av~d~~~~~~~~~a~~~-------------g~~~~~~~~~ll~~~~~D 91 (350)
T 3rc1_A 26 NPIRVGVIGCADIAWRRALPALEAEP-LTEVTAIASRRWDRAKRFTERF-------------GGEPVEGYPALLERDDVD 91 (350)
T ss_dssp CCEEEEEESCCHHHHHTHHHHHHHCT-TEEEEEEEESSHHHHHHHHHHH-------------CSEEEESHHHHHTCTTCS
T ss_pred CceEEEEEcCcHHHHHHHHHHHHhCC-CeEEEEEEcCCHHHHHHHHHHc-------------CCCCcCCHHHHhcCCCCC
Confidence 457999999999998 7899998863 26776 7899998888776642 2334478888876 589
Q ss_pred EEEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCC
Q 014700 202 YCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (420)
Q Consensus 202 iVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~ 237 (420)
+|++|+|.....+++..... .++.|+ +-|.+.
T Consensus 92 ~V~i~tp~~~h~~~~~~al~---aGk~Vl-~EKP~a 123 (350)
T 3rc1_A 92 AVYVPLPAVLHAEWIDRALR---AGKHVL-AEKPLT 123 (350)
T ss_dssp EEEECCCGGGHHHHHHHHHH---TTCEEE-EESSSC
T ss_pred EEEECCCcHHHHHHHHHHHH---CCCcEE-EeCCCC
Confidence 99999999887777665543 355444 445444
No 185
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=98.17 E-value=7.9e-06 Score=80.12 Aligned_cols=101 Identities=16% Similarity=0.198 Sum_probs=69.2
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEE---eCCHHHhccCCcEE
Q 014700 128 NKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIA---TTDAKTALLGADYC 203 (420)
Q Consensus 128 mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a---~td~~eal~~aDiV 203 (420)
|||+|||+ |.+|.+++..|+..|..++|.++|+++.......-.+ ...+..+.. ++|+++++++||+|
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~--------~~~~~~l~~~~~t~d~~~a~~~aDvV 72 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSH--------IETRATVKGYLGPEQLPDCLKGCDVV 72 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTT--------SSSSCEEEEEESGGGHHHHHTTCSEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhc--------cCcCceEEEecCCCCHHHHhCCCCEE
Confidence 69999998 9999999999998764468999999872221111111 111224555 25788889999999
Q ss_pred EEccCh----------------hhHHHHHHHhhhcCCCCCeEEEeccCCC
Q 014700 204 LHAMPV----------------QFSSSFLEGISDYVDPGLPFISLSKGLE 237 (420)
Q Consensus 204 IlaVp~----------------~~l~~vl~~i~~~l~~~~iVVs~snGi~ 237 (420)
|++... ..++++++.+.++. ++..+|..+|-++
T Consensus 73 vi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~sNPv~ 121 (314)
T 1mld_A 73 VIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHC-PDAMICIISNPVN 121 (314)
T ss_dssp EECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECSSCHH
T ss_pred EECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEECCCcc
Confidence 998632 23566667776665 5667777887543
No 186
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=98.17 E-value=1.6e-05 Score=77.26 Aligned_cols=115 Identities=11% Similarity=0.147 Sum_probs=75.6
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHH----HHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEE
Q 014700 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQ----SINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (420)
Q Consensus 128 mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~----~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiV 203 (420)
|||+|||+|.+|.++|..|+.++.-.++.++|.+++.++ .+..... + ......+...+|.+ ++++||+|
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~---~---~~~~~~i~~~~d~~-~~~~aDvV 73 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAA---G---IDKYPKIVGGADYS-LLKGSEII 73 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHG---G---GTCCCEEEEESCGG-GGTTCSEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccc---c---CCCCCeEecCCCHH-HhCCCCEE
Confidence 799999999999999999988875458999999885432 2322100 0 11122355566775 48999999
Q ss_pred EEccC-----h-----------hhHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCC
Q 014700 204 LHAMP-----V-----------QFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNP 255 (420)
Q Consensus 204 IlaVp-----~-----------~~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~ 255 (420)
|++-- . ..++++.+++.++- ++.+++.++|.++ .+..++.+..|.+
T Consensus 74 vitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~-p~aivlvvsNPvd-----~~t~i~~k~sg~p 135 (294)
T 2x0j_A 74 VVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENA-PESKILVVTNPMD-----VMTYIMWKESGKP 135 (294)
T ss_dssp EECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTS-TTCEEEECSSSHH-----HHHHHHHHHSSCC
T ss_pred EEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcC-CceEEEEecCcch-----hhHHhhHHHcCCC
Confidence 99742 1 12455666676654 5778888888544 3344555555543
No 187
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=98.17 E-value=4.1e-06 Score=85.36 Aligned_cols=92 Identities=11% Similarity=-0.036 Sum_probs=70.6
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEE
Q 014700 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (420)
Q Consensus 126 ~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIl 205 (420)
..++|+|||+|.+|..+|..|...| .+|+++++++.........|. . ..+++++++.+|+|++
T Consensus 210 ~GktVgIiG~G~IG~~vA~~Lka~G--a~Viv~D~~p~~a~~A~~~G~--------------~-~~sL~eal~~ADVVil 272 (436)
T 3h9u_A 210 AGKTACVCGYGDVGKGCAAALRGFG--ARVVVTEVDPINALQAAMEGY--------------Q-VLLVEDVVEEAHIFVT 272 (436)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHHTTC--------------E-ECCHHHHTTTCSEEEE
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCC--CEEEEECCChhhhHHHHHhCC--------------e-ecCHHHHHhhCCEEEE
Confidence 4689999999999999999999988 899999999866544444331 2 2378999999999999
Q ss_pred ccChhhHHHHHHHhhhcCCCCCeEEEeccCC
Q 014700 206 AMPVQFSSSFLEGISDYVDPGLPFISLSKGL 236 (420)
Q Consensus 206 aVp~~~l~~vl~~i~~~l~~~~iVVs~snGi 236 (420)
+.....+- -.+....++++.+||++.+|-
T Consensus 273 t~gt~~iI--~~e~l~~MK~gAIVINvgRg~ 301 (436)
T 3h9u_A 273 TTGNDDII--TSEHFPRMRDDAIVCNIGHFD 301 (436)
T ss_dssp CSSCSCSB--CTTTGGGCCTTEEEEECSSSG
T ss_pred CCCCcCcc--CHHHHhhcCCCcEEEEeCCCC
Confidence 77654321 124456678999999998874
No 188
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=98.16 E-value=6.6e-06 Score=81.16 Aligned_cols=103 Identities=12% Similarity=0.092 Sum_probs=69.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHh--cCCCCCCCCCCCCCceEEeCCHHHhccCCcEEE
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK--HCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~--g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVI 204 (420)
.|||+|||+|.+|.+++..|+..+...+|.++|+++++++..... +.. .++ .++++..+..+++++||+||
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~-~~~------~~~~i~~~~~~a~~~aDvVi 81 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNAL-PFT------SPKKIYSAEYSDAKDADLVV 81 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTG-GGS------CCCEEEECCGGGGGGCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHH-Hhc------CCeEEEECCHHHhCCCCEEE
Confidence 579999999999999999999887333899999998766542221 111 111 12333334567799999999
Q ss_pred EccChh----------------hHHHHHHHhhhcCCCCCeEEEeccCCC
Q 014700 205 HAMPVQ----------------FSSSFLEGISDYVDPGLPFISLSKGLE 237 (420)
Q Consensus 205 laVp~~----------------~l~~vl~~i~~~l~~~~iVVs~snGi~ 237 (420)
++.+.. .++++.+.+..+ .++.+++..+|.++
T Consensus 82 i~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~tNPv~ 129 (326)
T 2zqz_A 82 ITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDS-GFNGIFLVAANPVD 129 (326)
T ss_dssp ECCCCC-----CHHHHHHHHHHHHHHHHHHHHHH-TCCSEEEECSSSHH
T ss_pred EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEeCCcHH
Confidence 987532 244455566665 46777777887543
No 189
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=98.16 E-value=1.4e-05 Score=69.44 Aligned_cols=102 Identities=8% Similarity=0.051 Sum_probs=64.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCC-HHHHHHHHHhcC-CCCCC-CCCCCCCceEEeCCHHHh-ccCCcE
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRD-PAVCQSINEKHC-NCRYF-PEQKLPENVIATTDAKTA-LLGADY 202 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~-~~~~~~i~~~g~-~~~~l-~~~~l~~~i~a~td~~ea-l~~aDi 202 (420)
.++|.|+|+|.+|..++..|.+.| ++|++++++ ++.++.+.+... ....+ .+..- ...++++ +.++|+
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g--~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~------~~~l~~a~i~~ad~ 74 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRG--QNVTVISNLPEDDIKQLEQRLGDNADVIPGDSND------SSVLKKAGIDRCRA 74 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTT--CCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTS------HHHHHHHTTTTCSE
T ss_pred CCcEEEECCCHHHHHHHHHHHHCC--CCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCC------HHHHHHcChhhCCE
Confidence 468999999999999999999988 999999997 565555553210 01100 00000 0113333 778999
Q ss_pred EEEccChhhHHHHHHHhhhcCCCCCeEEEeccCC
Q 014700 203 CLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGL 236 (420)
Q Consensus 203 VIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi 236 (420)
||++++.+.....+......+.+...++...++.
T Consensus 75 vi~~~~~d~~n~~~~~~a~~~~~~~~ii~~~~~~ 108 (153)
T 1id1_A 75 ILALSDNDADNAFVVLSAKDMSSDVKTVLAVSDS 108 (153)
T ss_dssp EEECSSCHHHHHHHHHHHHHHTSSSCEEEECSSG
T ss_pred EEEecCChHHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 9999998765555544444443444555555543
No 190
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=98.14 E-value=5.5e-06 Score=85.62 Aligned_cols=93 Identities=12% Similarity=0.025 Sum_probs=70.0
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEE
Q 014700 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (420)
Q Consensus 126 ~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIl 205 (420)
..++|+|||.|.||..+|..|...| .+|++|++++.........| +.. .+++++++.+|+|++
T Consensus 256 ~GktVgIIG~G~IG~~vA~~l~~~G--~~Viv~d~~~~~~~~a~~~g--------------~~~-~~l~ell~~aDiVi~ 318 (479)
T 1v8b_A 256 SGKIVVICGYGDVGKGCASSMKGLG--ARVYITEIDPICAIQAVMEG--------------FNV-VTLDEIVDKGDFFIT 318 (479)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHHT--CEEEEECSCHHHHHHHHTTT--------------CEE-CCHHHHTTTCSEEEE
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCc--CEEEEEeCChhhHHHHHHcC--------------CEe-cCHHHHHhcCCEEEE
Confidence 4689999999999999999999888 89999999987543333322 122 378899999999999
Q ss_pred ccChhhHHHHHHHhhhcCCCCCeEEEeccCCC
Q 014700 206 AMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (420)
Q Consensus 206 aVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~ 237 (420)
++....+- -.+....++++.+||++..|-.
T Consensus 319 ~~~t~~lI--~~~~l~~MK~gailiNvgrg~~ 348 (479)
T 1v8b_A 319 CTGNVDVI--KLEHLLKMKNNAVVGNIGHFDD 348 (479)
T ss_dssp CCSSSSSB--CHHHHTTCCTTCEEEECSSTTT
T ss_pred CCChhhhc--CHHHHhhcCCCcEEEEeCCCCc
Confidence 97543321 1234456889999999988733
No 191
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=98.13 E-value=1.4e-05 Score=78.60 Aligned_cols=94 Identities=18% Similarity=0.220 Sum_probs=67.3
Q ss_pred CCCeEEEEcccHHHHHHHHHHH-hcCCCCeE-EEEeCCHHHHHHHHHhcCCCCCCCCCCCCCce-EEeCCHHHhcc--CC
Q 014700 126 RTNKVVVLGGGSFGTAMAAHVA-NKKSQLKV-YMLMRDPAVCQSINEKHCNCRYFPEQKLPENV-IATTDAKTALL--GA 200 (420)
Q Consensus 126 ~~mkI~IIGaGamG~alA~~La-~aG~~~~V-~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i-~a~td~~eal~--~a 200 (420)
.++||+|||+|.||..++..|. +.. +++| .+++++++..+.+.+.. ++ .+.+|+++++. ++
T Consensus 7 ~~~~v~iiG~G~ig~~~~~~l~~~~~-~~~~vav~d~~~~~~~~~a~~~-------------g~~~~~~~~~~~l~~~~~ 72 (346)
T 3cea_A 7 KPLRAAIIGLGRLGERHARHLVNKIQ-GVKLVAACALDSNQLEWAKNEL-------------GVETTYTNYKDMIDTENI 72 (346)
T ss_dssp CCEEEEEECCSTTHHHHHHHHHHTCS-SEEEEEEECSCHHHHHHHHHTT-------------CCSEEESCHHHHHTTSCC
T ss_pred CcceEEEEcCCHHHHHHHHHHHhcCC-CcEEEEEecCCHHHHHHHHHHh-------------CCCcccCCHHHHhcCCCC
Confidence 4579999999999999999998 542 2675 57899998887776531 11 45678888876 69
Q ss_pred cEEEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCC
Q 014700 201 DYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (420)
Q Consensus 201 DiVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~ 237 (420)
|+|++|+|.....+++..... .++.|+ +-|.+.
T Consensus 73 D~V~i~tp~~~h~~~~~~al~---~G~~v~-~eKp~~ 105 (346)
T 3cea_A 73 DAIFIVAPTPFHPEMTIYAMN---AGLNVF-CEKPLG 105 (346)
T ss_dssp SEEEECSCGGGHHHHHHHHHH---TTCEEE-ECSCCC
T ss_pred CEEEEeCChHhHHHHHHHHHH---CCCEEE-EcCCCC
Confidence 999999998877666655433 455554 344343
No 192
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=98.13 E-value=5.4e-06 Score=85.97 Aligned_cols=93 Identities=14% Similarity=0.018 Sum_probs=69.6
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEE
Q 014700 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (420)
Q Consensus 126 ~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIl 205 (420)
..++|+|||.|.||..+|..|...| .+|++|+|++.........| +.. .+++++++.+|+|++
T Consensus 276 ~GktVgIIG~G~IG~~vA~~l~~~G--~~V~v~d~~~~~~~~a~~~G--------------~~~-~~l~ell~~aDiVi~ 338 (494)
T 3d64_A 276 AGKIAVVAGYGDVGKGCAQSLRGLG--ATVWVTEIDPICALQAAMEG--------------YRV-VTMEYAADKADIFVT 338 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTT--CEEEEECSCHHHHHHHHTTT--------------CEE-CCHHHHTTTCSEEEE
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCC--CEEEEEeCChHhHHHHHHcC--------------CEe-CCHHHHHhcCCEEEE
Confidence 4689999999999999999999877 89999999987542222222 122 378899999999999
Q ss_pred ccChhhHHHHHHHhhhcCCCCCeEEEeccCCC
Q 014700 206 AMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (420)
Q Consensus 206 aVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~ 237 (420)
++....+- -++....++++.+||++..|-.
T Consensus 339 ~~~t~~lI--~~~~l~~MK~gAilINvgrg~v 368 (494)
T 3d64_A 339 ATGNYHVI--NHDHMKAMRHNAIVCNIGHFDS 368 (494)
T ss_dssp CSSSSCSB--CHHHHHHCCTTEEEEECSSSSC
T ss_pred CCCccccc--CHHHHhhCCCCcEEEEcCCCcc
Confidence 98543321 1234456788999999988743
No 193
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=98.12 E-value=2e-05 Score=78.26 Aligned_cols=95 Identities=13% Similarity=0.058 Sum_probs=68.9
Q ss_pred CCeEEEEcccHHHHHHHHHHH-hcCCCCeEE-EEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhcc--CCcE
Q 014700 127 TNKVVVLGGGSFGTAMAAHVA-NKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GADY 202 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La-~aG~~~~V~-l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~--~aDi 202 (420)
++||+|||+|.||..++..|. +.. +.+|. +++++++.++.+.+.... .....+|+++++. +.|+
T Consensus 23 ~~rvgiIG~G~~g~~~~~~l~~~~~-~~~lvav~d~~~~~~~~~a~~~g~-----------~~~~~~~~~~ll~~~~~D~ 90 (357)
T 3ec7_A 23 TLKAGIVGIGMIGSDHLRRLANTVS-GVEVVAVCDIVAGRAQAALDKYAI-----------EAKDYNDYHDLINDKDVEV 90 (357)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTCT-TEEEEEEECSSTTHHHHHHHHHTC-----------CCEEESSHHHHHHCTTCCE
T ss_pred eeeEEEECCcHHHHHHHHHHHhhCC-CcEEEEEEeCCHHHHHHHHHHhCC-----------CCeeeCCHHHHhcCCCCCE
Confidence 469999999999999999998 432 26766 789999888877664210 1356778998876 5899
Q ss_pred EEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCC
Q 014700 203 CLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (420)
Q Consensus 203 VIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~ 237 (420)
|++|+|.....+++..... .++.|+ +-|.+.
T Consensus 91 V~i~tp~~~h~~~~~~al~---aGk~Vl-~EKPla 121 (357)
T 3ec7_A 91 VIITASNEAHADVAVAALN---ANKYVF-CEKPLA 121 (357)
T ss_dssp EEECSCGGGHHHHHHHHHH---TTCEEE-EESSSC
T ss_pred EEEcCCcHHHHHHHHHHHH---CCCCEE-eecCcc
Confidence 9999999887776665544 355444 445544
No 194
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=98.12 E-value=2.1e-05 Score=78.07 Aligned_cols=100 Identities=11% Similarity=0.147 Sum_probs=69.7
Q ss_pred hcCCCeEEEEcccHHHHHHHHHHHhcCCCCeE-EEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhcc--CC
Q 014700 124 LERTNKVVVLGGGSFGTAMAAHVANKKSQLKV-YMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GA 200 (420)
Q Consensus 124 ~~~~mkI~IIGaGamG~alA~~La~aG~~~~V-~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~--~a 200 (420)
|++++||+|||+|.||..++..|.+.. +.++ .+++++++..+.+.+... ++......+|+++++. ++
T Consensus 3 ~~~~~~vgiiG~G~ig~~~~~~l~~~~-~~~lv~v~d~~~~~~~~~a~~~~---------~~~~~~~~~~~~~ll~~~~~ 72 (362)
T 1ydw_A 3 TETQIRIGVMGCADIARKVSRAIHLAP-NATISGVASRSLEKAKAFATANN---------YPESTKIHGSYESLLEDPEI 72 (362)
T ss_dssp ---CEEEEEESCCTTHHHHHHHHHHCT-TEEEEEEECSSHHHHHHHHHHTT---------CCTTCEEESSHHHHHHCTTC
T ss_pred CCCceEEEEECchHHHHHHHHHHhhCC-CcEEEEEEcCCHHHHHHHHHHhC---------CCCCCeeeCCHHHHhcCCCC
Confidence 455689999999999999999998753 2565 478999988877765421 1112356678888875 58
Q ss_pred cEEEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCC
Q 014700 201 DYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (420)
Q Consensus 201 DiVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~ 237 (420)
|+|++|+|.....+++.... +.++.|++ -|.+.
T Consensus 73 D~V~i~tp~~~h~~~~~~al---~aGk~V~~-EKP~a 105 (362)
T 1ydw_A 73 DALYVPLPTSLHVEWAIKAA---EKGKHILL-EKPVA 105 (362)
T ss_dssp CEEEECCCGGGHHHHHHHHH---TTTCEEEE-CSSCS
T ss_pred CEEEEcCChHHHHHHHHHHH---HCCCeEEE-ecCCc
Confidence 99999999988777666543 35665553 55443
No 195
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=98.12 E-value=2.2e-05 Score=76.65 Aligned_cols=91 Identities=10% Similarity=0.058 Sum_probs=65.2
Q ss_pred CeEEEEcccHHHHHH-HHHHHhcCCCCeEE-EEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhcc--CCcEE
Q 014700 128 NKVVVLGGGSFGTAM-AAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GADYC 203 (420)
Q Consensus 128 mkI~IIGaGamG~al-A~~La~aG~~~~V~-l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~--~aDiV 203 (420)
|||+|||+|.||..+ +..|.+.+ ++|. +++++++..+.+.+..... ...+|+++++. ++|+|
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~~~--~~~vav~d~~~~~~~~~~~~~g~~------------~~~~~~~~~l~~~~~D~V 66 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRATG--GEVVSMMSTSAERGAAYATENGIG------------KSVTSVEELVGDPDVDAV 66 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHHTT--CEEEEEECSCHHHHHHHHHHTTCS------------CCBSCHHHHHTCTTCCEE
T ss_pred CeEEEEcccHHHHHhhhHHhhcCC--CeEEEEECCCHHHHHHHHHHcCCC------------cccCCHHHHhcCCCCCEE
Confidence 589999999999998 77887754 7765 7899998887776542100 23457888776 59999
Q ss_pred EEccChhhHHHHHHHhhhcCCCCCeEEEeccCC
Q 014700 204 LHAMPVQFSSSFLEGISDYVDPGLPFISLSKGL 236 (420)
Q Consensus 204 IlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi 236 (420)
++|+|.....+++..... .++.|+ +-|.+
T Consensus 67 ~i~tp~~~h~~~~~~al~---~Gk~v~-~ekP~ 95 (332)
T 2glx_A 67 YVSTTNELHREQTLAAIR---AGKHVL-CEKPL 95 (332)
T ss_dssp EECSCGGGHHHHHHHHHH---TTCEEE-ECSSS
T ss_pred EEeCChhHhHHHHHHHHH---CCCeEE-EeCCC
Confidence 999998887776665433 455554 34444
No 196
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=98.09 E-value=8e-06 Score=79.53 Aligned_cols=91 Identities=12% Similarity=0.220 Sum_probs=65.0
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhcc--CCcE
Q 014700 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GADY 202 (420)
Q Consensus 126 ~~mkI~IIGaGamG~alA~~La~aG~~~~V~-l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~--~aDi 202 (420)
.++||+|||+|.||..++..|.+.. +.++. +++++++.++.+.+. +...+++++++. ++|+
T Consensus 9 ~~~~igiIG~G~~g~~~~~~l~~~~-~~~~v~v~d~~~~~~~~~~~~---------------~~~~~~~~~~l~~~~~D~ 72 (315)
T 3c1a_A 9 SPVRLALIGAGRWGKNYIRTIAGLP-GAALVRLASSNPDNLALVPPG---------------CVIESDWRSVVSAPEVEA 72 (315)
T ss_dssp CCEEEEEEECTTTTTTHHHHHHHCT-TEEEEEEEESCHHHHTTCCTT---------------CEEESSTHHHHTCTTCCE
T ss_pred CcceEEEECCcHHHHHHHHHHHhCC-CcEEEEEEeCCHHHHHHHHhh---------------CcccCCHHHHhhCCCCCE
Confidence 4579999999999999999998863 26654 889998764432221 245678888875 7999
Q ss_pred EEEccChhhHHHHHHHhhhcCCCCCeEEEeccCC
Q 014700 203 CLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGL 236 (420)
Q Consensus 203 VIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi 236 (420)
|++|+|.....+++..... .++.|+ +-|.+
T Consensus 73 V~i~tp~~~h~~~~~~al~---~Gk~v~-~eKP~ 102 (315)
T 3c1a_A 73 VIIATPPATHAEITLAAIA---SGKAVL-VEKPL 102 (315)
T ss_dssp EEEESCGGGHHHHHHHHHH---TTCEEE-EESSS
T ss_pred EEEeCChHHHHHHHHHHHH---CCCcEE-EcCCC
Confidence 9999999887777765433 455444 34544
No 197
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=98.08 E-value=1.9e-06 Score=75.12 Aligned_cols=84 Identities=6% Similarity=-0.029 Sum_probs=62.2
Q ss_pred CCeEEEEcc----cHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcE
Q 014700 127 TNKVVVLGG----GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADY 202 (420)
Q Consensus 127 ~mkI~IIGa----GamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDi 202 (420)
.++|+|||+ |.||..++..|.+.| ++|+.++++.. .+.+ .++.+..+++++...+|+
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G--~~v~~vnp~~~-g~~i----------------~G~~~~~sl~el~~~~Dl 73 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQG--YHVIPVSPKVA-GKTL----------------LGQQGYATLADVPEKVDM 73 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHT--CCEEEECSSST-TSEE----------------TTEECCSSTTTCSSCCSE
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCC--CEEEEeCCccc-cccc----------------CCeeccCCHHHcCCCCCE
Confidence 578999999 899999999999998 78766665431 0000 134555677776678999
Q ss_pred EEEccChhhHHHHHHHhhhcCCCCCeEE
Q 014700 203 CLHAMPVQFSSSFLEGISDYVDPGLPFI 230 (420)
Q Consensus 203 VIlaVp~~~l~~vl~~i~~~l~~~~iVV 230 (420)
+++++|+..+.++++++... ..+.+++
T Consensus 74 vii~vp~~~v~~v~~~~~~~-g~~~i~i 100 (145)
T 2duw_A 74 VDVFRNSEAAWGVAQEAIAI-GAKTLWL 100 (145)
T ss_dssp EECCSCSTHHHHHHHHHHHH-TCCEEEC
T ss_pred EEEEeCHHHHHHHHHHHHHc-CCCEEEE
Confidence 99999999999999887663 3344444
No 198
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=98.07 E-value=1.5e-05 Score=77.64 Aligned_cols=93 Identities=12% Similarity=0.099 Sum_probs=63.9
Q ss_pred CCCeEEEEcccHHHHH-HHHHHHhcCCCCeEE-EEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEE
Q 014700 126 RTNKVVVLGGGSFGTA-MAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (420)
Q Consensus 126 ~~mkI~IIGaGamG~a-lA~~La~aG~~~~V~-l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiV 203 (420)
.++||+|||+|.||.. ++..|.+.. +.+|. +++++++..+.+.+... +..+++.++...++|+|
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~~l~~~~-~~~lvav~d~~~~~~~~~~~~~g-------------~~~~~~~~~l~~~~D~V 69 (319)
T 1tlt_A 4 KKLRIGVVGLGGIAQKAWLPVLAAAS-DWTLQGAWSPTRAKALPICESWR-------------IPYADSLSSLAASCDAV 69 (319)
T ss_dssp -CEEEEEECCSTHHHHTHHHHHHSCS-SEEEEEEECSSCTTHHHHHHHHT-------------CCBCSSHHHHHTTCSEE
T ss_pred CcceEEEECCCHHHHHHHHHHHHhCC-CeEEEEEECCCHHHHHHHHHHcC-------------CCccCcHHHhhcCCCEE
Confidence 3579999999999996 888887642 26766 88999887777665421 11345676654679999
Q ss_pred EEccChhhHHHHHHHhhhcCCCCCeEEEeccCC
Q 014700 204 LHAMPVQFSSSFLEGISDYVDPGLPFISLSKGL 236 (420)
Q Consensus 204 IlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi 236 (420)
++|+|.....+++..... .++.|+ +-|.+
T Consensus 70 ~i~tp~~~h~~~~~~al~---~G~~v~-~eKP~ 98 (319)
T 1tlt_A 70 FVHSSTASHFDVVSTLLN---AGVHVC-VDKPL 98 (319)
T ss_dssp EECSCTTHHHHHHHHHHH---TTCEEE-EESSS
T ss_pred EEeCCchhHHHHHHHHHH---cCCeEE-EeCCC
Confidence 999998877666655433 455444 34433
No 199
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=98.06 E-value=8.1e-06 Score=80.31 Aligned_cols=93 Identities=11% Similarity=0.081 Sum_probs=68.2
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEE
Q 014700 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (420)
Q Consensus 126 ~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIl 205 (420)
+.++|+|||+|.||..++..|.+.....+|.+|+|++++++++.+.... . + ..+. .+++++++ ++|+|+.
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~-~---~----~~~~-~~~~~e~v-~aDvVi~ 193 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCED-R---G----ISAS-VQPAEEAS-RCDVLVT 193 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHH-T---T----CCEE-ECCHHHHT-SSSEEEE
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHh-c---C----ceEE-ECCHHHHh-CCCEEEE
Confidence 4579999999999999999998732127899999999998888764210 0 0 1244 67888989 9999999
Q ss_pred ccChhhHHHHHHHhhhcCCCCCeEEEe
Q 014700 206 AMPVQFSSSFLEGISDYVDPGLPFISL 232 (420)
Q Consensus 206 aVp~~~l~~vl~~i~~~l~~~~iVVs~ 232 (420)
|+|+.. .++. ...+++++.|+.+
T Consensus 194 aTp~~~--pv~~--~~~l~~G~~V~~i 216 (322)
T 1omo_A 194 TTPSRK--PVVK--AEWVEEGTHINAI 216 (322)
T ss_dssp CCCCSS--CCBC--GGGCCTTCEEEEC
T ss_pred eeCCCC--ceec--HHHcCCCeEEEEC
Confidence 999743 1221 2467788888776
No 200
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=98.05 E-value=9.3e-06 Score=79.63 Aligned_cols=94 Identities=14% Similarity=0.032 Sum_probs=65.1
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHHhcCCCCCCCCCCCCCce-EEeCCHHHhcc--CCc
Q 014700 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENV-IATTDAKTALL--GAD 201 (420)
Q Consensus 126 ~~mkI~IIGaGamG~alA~~La~aG~~~~V~-l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i-~a~td~~eal~--~aD 201 (420)
.++||+|||+|.||..++..|.+.+ +.+|. +++|++++++.+.+.. ++ .+++|+++++. ++|
T Consensus 4 ~~~rigiiG~G~ig~~~~~~l~~~~-~~~~~av~d~~~~~~~~~a~~~-------------~~~~~~~~~~~ll~~~~~D 69 (329)
T 3evn_A 4 SKVRYGVVSTAKVAPRFIEGVRLAG-NGEVVAVSSRTLESAQAFANKY-------------HLPKAYDKLEDMLADESID 69 (329)
T ss_dssp -CEEEEEEBCCTTHHHHHHHHHHHC-SEEEEEEECSCSSTTCC---CC-------------CCSCEESCHHHHHTCTTCC
T ss_pred CceEEEEEechHHHHHHHHHHHhCC-CcEEEEEEcCCHHHHHHHHHHc-------------CCCcccCCHHHHhcCCCCC
Confidence 3579999999999999999998765 25555 7789887655544321 11 35678999887 789
Q ss_pred EEEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCC
Q 014700 202 YCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (420)
Q Consensus 202 iVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~ 237 (420)
+|++|+|.....+++..... .++.|+ +-|.+.
T Consensus 70 ~V~i~tp~~~h~~~~~~al~---aGk~Vl-~EKP~a 101 (329)
T 3evn_A 70 VIYVATINQDHYKVAKAALL---AGKHVL-VEKPFT 101 (329)
T ss_dssp EEEECSCGGGHHHHHHHHHH---TTCEEE-EESSCC
T ss_pred EEEECCCcHHHHHHHHHHHH---CCCeEE-EccCCc
Confidence 99999998887776655443 355544 455444
No 201
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=98.03 E-value=2.3e-05 Score=76.50 Aligned_cols=93 Identities=19% Similarity=0.296 Sum_probs=62.9
Q ss_pred CCeEEEEcccHHHH-HHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhc-cCCcEEE
Q 014700 127 TNKVVVLGGGSFGT-AMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL-LGADYCL 204 (420)
Q Consensus 127 ~mkI~IIGaGamG~-alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal-~~aDiVI 204 (420)
++||+|||+|.||. .++..|.+.. +.+|.+++++++..+.+.+..... ....+..+.+ .++|+|+
T Consensus 2 ~~~igiIG~G~ig~~~~~~~l~~~~-~~~l~v~d~~~~~~~~~a~~~g~~------------~~~~~~~~~l~~~~D~V~ 68 (323)
T 1xea_A 2 SLKIAMIGLGDIAQKAYLPVLAQWP-DIELVLCTRNPKVLGTLATRYRVS------------ATCTDYRDVLQYGVDAVM 68 (323)
T ss_dssp CEEEEEECCCHHHHHTHHHHHTTST-TEEEEEECSCHHHHHHHHHHTTCC------------CCCSSTTGGGGGCCSEEE
T ss_pred CcEEEEECCCHHHHHHHHHHHHhCC-CceEEEEeCCHHHHHHHHHHcCCC------------ccccCHHHHhhcCCCEEE
Confidence 47999999999998 5898887652 267779999999888776642110 0012333445 6899999
Q ss_pred EccChhhHHHHHHHhhhcCCCCCeEEEeccCC
Q 014700 205 HAMPVQFSSSFLEGISDYVDPGLPFISLSKGL 236 (420)
Q Consensus 205 laVp~~~l~~vl~~i~~~l~~~~iVVs~snGi 236 (420)
+|+|.....+++..... .++.|+ +-|.+
T Consensus 69 i~tp~~~h~~~~~~al~---~Gk~V~-~EKP~ 96 (323)
T 1xea_A 69 IHAATDVHSTLAAFFLH---LGIPTF-VDKPL 96 (323)
T ss_dssp ECSCGGGHHHHHHHHHH---TTCCEE-EESCS
T ss_pred EECCchhHHHHHHHHHH---CCCeEE-EeCCC
Confidence 99998887777655433 355444 33433
No 202
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=98.03 E-value=3.5e-05 Score=76.60 Aligned_cols=92 Identities=15% Similarity=0.164 Sum_probs=66.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhcc--CCcEE
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GADYC 203 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~-l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~--~aDiV 203 (420)
++||+|||+|.||...+..|.+.. +.+|. +++++++..+...+.+ +.+.+|+++++. +.|+|
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~~-~~~l~av~d~~~~~~~~a~~~g--------------~~~~~~~~~ll~~~~~D~V 69 (359)
T 3e18_A 5 KYQLVIVGYGGMGSYHVTLASAAD-NLEVHGVFDILAEKREAAAQKG--------------LKIYESYEAVLADEKVDAV 69 (359)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTST-TEEEEEEECSSHHHHHHHHTTT--------------CCBCSCHHHHHHCTTCCEE
T ss_pred cCcEEEECcCHHHHHHHHHHHhCC-CcEEEEEEcCCHHHHHHHHhcC--------------CceeCCHHHHhcCCCCCEE
Confidence 468999999999999999998763 36776 6799988766443322 234568888876 78999
Q ss_pred EEccChhhHHHHHHHhhhcCCCCCeEEEeccCCC
Q 014700 204 LHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (420)
Q Consensus 204 IlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~ 237 (420)
++|+|.....+++..... .++.|+ +-|.+.
T Consensus 70 ~i~tp~~~h~~~~~~al~---aGkhVl-~EKP~a 99 (359)
T 3e18_A 70 LIATPNDSHKELAISALE---AGKHVV-CEKPVT 99 (359)
T ss_dssp EECSCGGGHHHHHHHHHH---TTCEEE-EESSCC
T ss_pred EEcCCcHHHHHHHHHHHH---CCCCEE-eeCCCc
Confidence 999999887776655543 455554 455444
No 203
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=98.02 E-value=6.5e-06 Score=82.11 Aligned_cols=83 Identities=18% Similarity=0.253 Sum_probs=58.7
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEE
Q 014700 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (420)
Q Consensus 126 ~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIl 205 (420)
..|||.|||+|.+|..++..|++. ++|++++++.+.++.+++... .+.+. +.-..+++++++++|+||.
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~~~---~~v~~~~~~~~~~~~~~~~~~------~~~~d--~~d~~~l~~~~~~~DvVi~ 83 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLKDE---FDVYIGDVNNENLEKVKEFAT------PLKVD--ASNFDKLVEVMKEFELVIG 83 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT---SEEEEEESCHHHHHHHTTTSE------EEECC--TTCHHHHHHHHTTCSEEEE
T ss_pred CccEEEEECCCHHHHHHHHHHhcC---CCeEEEEcCHHHHHHHhccCC------cEEEe--cCCHHHHHHHHhCCCEEEE
Confidence 358999999999999999999764 799999999988877654311 00000 0001134566789999999
Q ss_pred ccChhhHHHHHHHh
Q 014700 206 AMPVQFSSSFLEGI 219 (420)
Q Consensus 206 aVp~~~l~~vl~~i 219 (420)
|+|......+++..
T Consensus 84 ~~p~~~~~~v~~~~ 97 (365)
T 3abi_A 84 ALPGFLGFKSIKAA 97 (365)
T ss_dssp CCCGGGHHHHHHHH
T ss_pred ecCCcccchHHHHH
Confidence 99987666665543
No 204
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=98.02 E-value=5.2e-06 Score=81.46 Aligned_cols=94 Identities=14% Similarity=0.129 Sum_probs=64.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEE
Q 014700 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (420)
Q Consensus 126 ~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIl 205 (420)
+.++|+|||+|.||..++..|.......+|.+|+|+ +.+++.+.-.. . + + ..+.+. +++++++++|+||.
T Consensus 120 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~--~a~~la~~l~~-~-~-g----~~~~~~-~~~eav~~aDIVi~ 189 (313)
T 3hdj_A 120 RSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY--ASPEILERIGR-R-C-G----VPARMA-APADIAAQADIVVT 189 (313)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT--CCHHHHHHHHH-H-H-T----SCEEEC-CHHHHHHHCSEEEE
T ss_pred CCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc--HHHHHHHHHHH-h-c-C----CeEEEe-CHHHHHhhCCEEEE
Confidence 457999999999999999999874212689999998 33333321000 0 0 0 123455 89999999999999
Q ss_pred ccChhhHHHHHHHhhhcCCCCCeEEEec
Q 014700 206 AMPVQFSSSFLEGISDYVDPGLPFISLS 233 (420)
Q Consensus 206 aVp~~~l~~vl~~i~~~l~~~~iVVs~s 233 (420)
|+|+.. .++. .+.++++++|+.+.
T Consensus 190 aT~s~~--pvl~--~~~l~~G~~V~~vG 213 (313)
T 3hdj_A 190 ATRSTT--PLFA--GQALRAGAFVGAIG 213 (313)
T ss_dssp CCCCSS--CSSC--GGGCCTTCEEEECC
T ss_pred ccCCCC--cccC--HHHcCCCcEEEECC
Confidence 999752 2222 35688899888774
No 205
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=98.02 E-value=6.1e-06 Score=82.90 Aligned_cols=105 Identities=14% Similarity=0.116 Sum_probs=69.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCC--CCCCCCce---------EEeCCHHH
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFP--EQKLPENV---------IATTDAKT 195 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~--~~~l~~~i---------~a~td~~e 195 (420)
..||+|||+|.+|..+++.+...| .+|+++||++++.+.+.+.|.....++ ........ ....++++
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lG--a~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e 261 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLG--AKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALED 261 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHT--CEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHH
T ss_pred CCEEEEECchHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHH
Confidence 469999999999999999999988 899999999988887776543211110 00000000 00125677
Q ss_pred hccCCcEEEEcc--ChhhHHH-HHHHhhhcCCCCCeEEEec
Q 014700 196 ALLGADYCLHAM--PVQFSSS-FLEGISDYVDPGLPFISLS 233 (420)
Q Consensus 196 al~~aDiVIlaV--p~~~l~~-vl~~i~~~l~~~~iVVs~s 233 (420)
+++++|+||.++ |...... +-++....++++.+||+++
T Consensus 262 ~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA 302 (381)
T 3p2y_A 262 AITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLA 302 (381)
T ss_dssp HHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETT
T ss_pred HHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEe
Confidence 889999999986 4321111 1244555677899999885
No 206
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=98.01 E-value=2.5e-05 Score=79.29 Aligned_cols=93 Identities=18% Similarity=0.270 Sum_probs=74.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHH------HHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCC
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPA------VCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGA 200 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~------~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~a 200 (420)
.+||+|||.|+-|.+-|..|.++| .+|++--|... ..+...+.|. .+. +.+|+++.+
T Consensus 37 gK~IaVIGyGsQG~AqAlNLRDSG--v~V~Vglr~~s~~e~~~S~~~A~~~Gf--------------~v~-~~~eA~~~A 99 (491)
T 3ulk_A 37 GKKVVIVGCGAQGLNQGLNMRDSG--LDISYALRKEAIAEKRASWRKATENGF--------------KVG-TYEELIPQA 99 (491)
T ss_dssp TSEEEEESCSHHHHHHHHHHHHTT--CEEEEEECHHHHHTTCHHHHHHHHTTC--------------EEE-EHHHHGGGC
T ss_pred CCEEEEeCCChHhHHHHhHHHhcC--CcEEEEeCCCCcccccchHHHHHHCCC--------------Eec-CHHHHHHhC
Confidence 489999999999999999999999 89998777432 2234444442 332 578999999
Q ss_pred cEEEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCC
Q 014700 201 DYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (420)
Q Consensus 201 DiVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~ 237 (420)
|+|++-+|+..-.++.+.|.|+++++..+.. +-|+.
T Consensus 100 DvV~~L~PD~~q~~vy~~I~p~lk~G~~L~f-aHGFn 135 (491)
T 3ulk_A 100 DLVINLTPDKQHSDVVRTVQPLMKDGAALGY-SHGFN 135 (491)
T ss_dssp SEEEECSCGGGHHHHHHHHGGGSCTTCEEEE-SSCHH
T ss_pred CEEEEeCChhhHHHHHHHHHhhCCCCCEEEe-cCccc
Confidence 9999999999999999999999999988764 45653
No 207
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=98.00 E-value=2.2e-05 Score=77.02 Aligned_cols=95 Identities=12% Similarity=0.064 Sum_probs=67.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCC-CCeE-EEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhcc--CCcE
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKS-QLKV-YMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GADY 202 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~-~~~V-~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~--~aDi 202 (420)
++||+|||+|.||..++..|.+... +++| .+++|+++.++.+.+.... + .+.+|.++++. +.|+
T Consensus 2 ~~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~~~~---------~---~~~~~~~~ll~~~~vD~ 69 (334)
T 3ohs_X 2 ALRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDI---------P---KAYGSYEELAKDPNVEV 69 (334)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHHHTC---------S---CEESSHHHHHHCTTCCE
T ss_pred ccEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHHcCC---------C---cccCCHHHHhcCCCCCE
Confidence 5799999999999999999976531 1344 4789999888887765311 0 35678888876 6899
Q ss_pred EEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCC
Q 014700 203 CLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (420)
Q Consensus 203 VIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~ 237 (420)
|++|+|.....+++..... .++.|+ +-|.+.
T Consensus 70 V~i~tp~~~H~~~~~~al~---~GkhVl-~EKP~a 100 (334)
T 3ohs_X 70 AYVGTQHPQHKAAVMLCLA---AGKAVL-CEKPMG 100 (334)
T ss_dssp EEECCCGGGHHHHHHHHHH---TTCEEE-EESSSS
T ss_pred EEECCCcHHHHHHHHHHHh---cCCEEE-EECCCC
Confidence 9999998887776655543 355544 455554
No 208
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=97.99 E-value=3.4e-05 Score=75.97 Aligned_cols=97 Identities=13% Similarity=0.163 Sum_probs=68.2
Q ss_pred cCCCeEEEEcccHHHHH-HHHHHHhcCCCCeEE-EEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhcc--CC
Q 014700 125 ERTNKVVVLGGGSFGTA-MAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GA 200 (420)
Q Consensus 125 ~~~mkI~IIGaGamG~a-lA~~La~aG~~~~V~-l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~--~a 200 (420)
..|+||||||+|.||.. ++..|.+.. +.+|. ++|+++++++++.+.... .++++|.++++. +.
T Consensus 21 ~~mirigiIG~G~ig~~~~~~~~~~~~-~~~lvav~d~~~~~a~~~a~~~g~------------~~~y~d~~ell~~~~i 87 (350)
T 4had_A 21 QSMLRFGIISTAKIGRDNVVPAIQDAE-NCVVTAIASRDLTRAREMADRFSV------------PHAFGSYEEMLASDVI 87 (350)
T ss_dssp -CCEEEEEESCCHHHHHTHHHHHHHCS-SEEEEEEECSSHHHHHHHHHHHTC------------SEEESSHHHHHHCSSC
T ss_pred cCccEEEEEcChHHHHHHHHHHHHhCC-CeEEEEEECCCHHHHHHHHHHcCC------------CeeeCCHHHHhcCCCC
Confidence 45679999999999975 566676653 26766 689999988888765311 146779999874 58
Q ss_pred cEEEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCCc
Q 014700 201 DYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLEL 238 (420)
Q Consensus 201 DiVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~ 238 (420)
|+|++|+|.....+++..... .++-|+ +-|.+..
T Consensus 88 DaV~I~tP~~~H~~~~~~al~---aGkhVl-~EKPla~ 121 (350)
T 4had_A 88 DAVYIPLPTSQHIEWSIKAAD---AGKHVV-CEKPLAL 121 (350)
T ss_dssp SEEEECSCGGGHHHHHHHHHH---TTCEEE-ECSCCCS
T ss_pred CEEEEeCCCchhHHHHHHHHh---cCCEEE-EeCCccc
Confidence 999999998877776655544 344443 4565543
No 209
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=97.98 E-value=2.6e-05 Score=76.78 Aligned_cols=115 Identities=18% Similarity=0.197 Sum_probs=73.6
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhcCCCCeEEEEeCCHHHH--HHHHHhcCCCCCCCCCCCCCceEE---eCCHHHhccCC
Q 014700 127 TNKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRDPAVC--QSINEKHCNCRYFPEQKLPENVIA---TTDAKTALLGA 200 (420)
Q Consensus 127 ~mkI~IIG-aGamG~alA~~La~aG~~~~V~l~~r~~~~~--~~i~~~g~~~~~l~~~~l~~~i~a---~td~~eal~~a 200 (420)
+|||+|+| +|.+|.+++..|+..|..++|.++|++++.. ..+... . .+..+.. ++|++++++++
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~--~--------~~~~v~~~~~t~d~~~al~ga 77 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHM--D--------TGAVVRGFLGQQQLEAALTGM 77 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTS--C--------SSCEEEEEESHHHHHHHHTTC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcc--c--------ccceEEEEeCCCCHHHHcCCC
Confidence 57999999 7999999999998875336899999876522 222221 0 1113343 44677889999
Q ss_pred cEEEEccCh----------------hhHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhC
Q 014700 201 DYCLHAMPV----------------QFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALR 253 (420)
Q Consensus 201 DiVIlaVp~----------------~~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg 253 (420)
|+||++... ..++++++.+..+- ++.+|+..+|.++.. ...+++.+.+..+
T Consensus 78 DvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~-p~~~viv~SNPv~~~-~~~~t~~~~~~~~ 144 (326)
T 1smk_A 78 DLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCC-PRAIVNLISNPVNST-VPIAAEVFKKAGT 144 (326)
T ss_dssp SEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHC-TTSEEEECCSSHHHH-HHHHHHHHHHHTC
T ss_pred CEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEECCchHHH-HHHHHHHHHHccC
Confidence 999998742 12555666666554 566777777755421 1224455555433
No 210
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=97.98 E-value=1.3e-05 Score=83.17 Aligned_cols=92 Identities=14% Similarity=0.029 Sum_probs=70.4
Q ss_pred cCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEE
Q 014700 125 ERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (420)
Q Consensus 125 ~~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVI 204 (420)
...++|+|||+|.||..+|..|...| .+|++++++++..+...+.|. .. .+++++++++|+||
T Consensus 272 l~GktV~IiG~G~IG~~~A~~lka~G--a~Viv~d~~~~~~~~A~~~Ga--------------~~-~~l~e~l~~aDvVi 334 (494)
T 3ce6_A 272 IGGKKVLICGYGDVGKGCAEAMKGQG--ARVSVTEIDPINALQAMMEGF--------------DV-VTVEEAIGDADIVV 334 (494)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHHTTC--------------EE-CCHHHHGGGCSEEE
T ss_pred CCcCEEEEEccCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHcCC--------------EE-ecHHHHHhCCCEEE
Confidence 34689999999999999999999888 899999999987666555442 11 25778888999999
Q ss_pred EccChhhHHHHHHHhhhcCCCCCeEEEeccC
Q 014700 205 HAMPVQFSSSFLEGISDYVDPGLPFISLSKG 235 (420)
Q Consensus 205 laVp~~~l~~vl~~i~~~l~~~~iVVs~snG 235 (420)
.+++...+-. .+....++++.+|+++..+
T Consensus 335 ~atgt~~~i~--~~~l~~mk~ggilvnvG~~ 363 (494)
T 3ce6_A 335 TATGNKDIIM--LEHIKAMKDHAILGNIGHF 363 (494)
T ss_dssp ECSSSSCSBC--HHHHHHSCTTCEEEECSSS
T ss_pred ECCCCHHHHH--HHHHHhcCCCcEEEEeCCC
Confidence 9998655211 1344557788999887654
No 211
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=97.97 E-value=1.9e-05 Score=75.88 Aligned_cols=148 Identities=14% Similarity=0.113 Sum_probs=92.2
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHhcCCCCeEEE-EeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEE
Q 014700 126 RTNKVVVLG-GGSFGTAMAAHVANKKSQLKVYM-LMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (420)
Q Consensus 126 ~~mkI~IIG-aGamG~alA~~La~aG~~~~V~l-~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiV 203 (420)
.||||+|+| .|.||..++..+.+.. ++++.. ++|+.... .|.....+-+ +..++.+++|+++++.++|+|
T Consensus 6 ~mikV~V~Ga~G~MG~~i~~~l~~~~-~~eLv~~~d~~~~~~-----~G~d~gel~g--~~~gv~v~~dl~~ll~~~DVV 77 (272)
T 4f3y_A 6 SSMKIAIAGASGRMGRMLIEAVLAAP-DATLVGALDRTGSPQ-----LGQDAGAFLG--KQTGVALTDDIERVCAEADYL 77 (272)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHHCT-TEEEEEEBCCTTCTT-----TTSBTTTTTT--CCCSCBCBCCHHHHHHHCSEE
T ss_pred cccEEEEECCCCHHHHHHHHHHHhCC-CCEEEEEEEecCccc-----ccccHHHHhC--CCCCceecCCHHHHhcCCCEE
Confidence 468999999 8999999999998764 366664 57764210 1111111111 122566778999988899999
Q ss_pred EEccChhhHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCeEEEECcccHHHHhhcCCeEEEEec
Q 014700 204 LHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVAS 283 (420)
Q Consensus 204 IlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~~vl~GP~~a~ev~~g~~t~i~ia~ 283 (420)
|-++++....+.+..... .+..+|..+.|+..+.. +.+.+... ...++..|++...+..
T Consensus 78 IDfT~p~a~~~~~~~al~---~G~~vVigTTG~s~~~~----~~L~~aa~----~~~vv~a~N~s~Gv~l---------- 136 (272)
T 4f3y_A 78 IDFTLPEGTLVHLDAALR---HDVKLVIGTTGFSEPQK----AQLRAAGE----KIALVFSANMSVGVNV---------- 136 (272)
T ss_dssp EECSCHHHHHHHHHHHHH---HTCEEEECCCCCCHHHH----HHHHHHTT----TSEEEECSCCCHHHHH----------
T ss_pred EEcCCHHHHHHHHHHHHH---cCCCEEEECCCCCHHHH----HHHHHHhc----cCCEEEECCCCHHHHH----------
Confidence 999998877766665544 45667777778865422 33444322 2457888988754211
Q ss_pred CCHHHHHHHHHHHhcCCceEE
Q 014700 284 KDRKLANAVQQLLASKHLRIS 304 (420)
Q Consensus 284 ~d~e~~~~l~~ll~~~g~~v~ 304 (420)
-.+.++++.+.|.. ++.+.
T Consensus 137 -~~~~~~~aa~~l~~-~~die 155 (272)
T 4f3y_A 137 -TMKLLEFAAKQFAQ-GYDIE 155 (272)
T ss_dssp -HHHHHHHHHHHTSS-SCEEE
T ss_pred -HHHHHHHHHHhcCc-CCCEE
Confidence 02445666777752 34443
No 212
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=97.96 E-value=2.1e-05 Score=78.78 Aligned_cols=94 Identities=16% Similarity=0.241 Sum_probs=67.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEc
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIla 206 (420)
.+||+|||+|.||.+++..|++. ++|++++|+.++++++.+... .. .+ .+....+++++++++|+||.|
T Consensus 16 ~~~v~IiGaG~iG~~ia~~L~~~---~~V~V~~R~~~~a~~la~~~~-~~-----~~--d~~~~~~l~~ll~~~DvVIn~ 84 (365)
T 2z2v_A 16 HMKVLILGAGNIGRAIAWDLKDE---FDVYIGDVNNENLEKVKEFAT-PL-----KV--DASNFDKLVEVMKEFELVIGA 84 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTT---SEEEEEESCHHHHHHHTTTSE-EE-----EC--CTTCHHHHHHHHTTCSCEEEC
T ss_pred CCeEEEEcCCHHHHHHHHHHHcC---CeEEEEECCHHHHHHHHhhCC-eE-----EE--ecCCHHHHHHHHhCCCEEEEC
Confidence 57999999999999999999886 689999999998888765321 00 00 000113466778899999999
Q ss_pred cChhhHHHHHHHhhhcCCCCCeEEEecc
Q 014700 207 MPVQFSSSFLEGISDYVDPGLPFISLSK 234 (420)
Q Consensus 207 Vp~~~l~~vl~~i~~~l~~~~iVVs~sn 234 (420)
+|......+++.. ++.++.+++++.
T Consensus 85 ~P~~~~~~v~~a~---l~~G~~~vD~s~ 109 (365)
T 2z2v_A 85 LPGFLGFKSIKAA---IKSKVDMVDVSF 109 (365)
T ss_dssp CCHHHHHHHHHHH---HHTTCCEEECCC
T ss_pred CChhhhHHHHHHH---HHhCCeEEEccC
Confidence 9976655554433 345777777663
No 213
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=97.93 E-value=1.3e-05 Score=81.60 Aligned_cols=91 Identities=14% Similarity=0.103 Sum_probs=67.4
Q ss_pred cCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEE
Q 014700 125 ERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (420)
Q Consensus 125 ~~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVI 204 (420)
-..++|+|+|+|.+|..+|..|...| .+|+++++++.........|. . ..+++++++.+|+|+
T Consensus 218 L~GktV~ViG~G~IGk~vA~~Lra~G--a~Viv~D~dp~ra~~A~~~G~--------------~-v~~Leeal~~ADIVi 280 (435)
T 3gvp_A 218 FGGKQVVVCGYGEVGKGCCAALKAMG--SIVYVTEIDPICALQACMDGF--------------R-LVKLNEVIRQVDIVI 280 (435)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHHTTC--------------E-ECCHHHHTTTCSEEE
T ss_pred ecCCEEEEEeeCHHHHHHHHHHHHCC--CEEEEEeCChhhhHHHHHcCC--------------E-eccHHHHHhcCCEEE
Confidence 34689999999999999999999888 899999999865443333331 1 236889999999999
Q ss_pred EccChhhHHHHH-HHhhhcCCCCCeEEEeccC
Q 014700 205 HAMPVQFSSSFL-EGISDYVDPGLPFISLSKG 235 (420)
Q Consensus 205 laVp~~~l~~vl-~~i~~~l~~~~iVVs~snG 235 (420)
+|.-... ++ .+....++++.+|+++..|
T Consensus 281 ~atgt~~---lI~~e~l~~MK~gailINvgrg 309 (435)
T 3gvp_A 281 TCTGNKN---VVTREHLDRMKNSCIVCNMGHS 309 (435)
T ss_dssp ECSSCSC---SBCHHHHHHSCTTEEEEECSST
T ss_pred ECCCCcc---cCCHHHHHhcCCCcEEEEecCC
Confidence 9743222 22 1334556788999999876
No 214
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=97.92 E-value=4.3e-05 Score=74.40 Aligned_cols=86 Identities=14% Similarity=0.158 Sum_probs=56.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEE
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~-l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIl 205 (420)
++||+|||+|.||..++..|.+.. +.+|. +++++++.++. .|. . ....+++.+. .++|+|++
T Consensus 9 ~irv~IIG~G~iG~~~~~~l~~~~-~~elvav~d~~~~~~~~---~g~--------~----~~~~~~l~~~-~~~DvVii 71 (304)
T 3bio_A 9 KIRAAIVGYGNIGRYALQALREAP-DFEIAGIVRRNPAEVPF---ELQ--------P----FRVVSDIEQL-ESVDVALV 71 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCT-TEEEEEEECC----------CCT--------T----SCEESSGGGS-SSCCEEEE
T ss_pred CCEEEEECChHHHHHHHHHHhcCC-CCEEEEEEcCCHHHHHH---cCC--------C----cCCHHHHHhC-CCCCEEEE
Confidence 469999999999999999998753 37777 68898875443 221 0 1223455553 78999999
Q ss_pred ccChhhHHHHHHHhhhcCCCCCeEEEe
Q 014700 206 AMPVQFSSSFLEGISDYVDPGLPFISL 232 (420)
Q Consensus 206 aVp~~~l~~vl~~i~~~l~~~~iVVs~ 232 (420)
|+|.....+.+.... +.+..|++.
T Consensus 72 atp~~~h~~~~~~al---~aG~~Vi~e 95 (304)
T 3bio_A 72 CSPSREVERTALEIL---KKGICTADS 95 (304)
T ss_dssp CSCHHHHHHHHHHHH---TTTCEEEEC
T ss_pred CCCchhhHHHHHHHH---HcCCeEEEC
Confidence 999887766665544 346666654
No 215
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=97.92 E-value=1.2e-05 Score=81.38 Aligned_cols=105 Identities=14% Similarity=0.184 Sum_probs=69.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCC-----C----CCCceE------EeC
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQ-----K----LPENVI------ATT 191 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~-----~----l~~~i~------a~t 191 (420)
..||+|||+|.+|..+++.+...| .+|+++|+++++.+.+.+.|.....++.. . +...+. -..
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lG--a~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~ 267 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLG--AVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA 267 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCC--CEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence 469999999999999999999988 89999999998877777654321100000 0 000000 012
Q ss_pred CHHHhccCCcEEEEcc--ChhhHHH-HHHHhhhcCCCCCeEEEec
Q 014700 192 DAKTALLGADYCLHAM--PVQFSSS-FLEGISDYVDPGLPFISLS 233 (420)
Q Consensus 192 d~~eal~~aDiVIlaV--p~~~l~~-vl~~i~~~l~~~~iVVs~s 233 (420)
+++++++++|+||.++ |...-.. +-++....++++.+||+++
T Consensus 268 ~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA 312 (405)
T 4dio_A 268 LVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLA 312 (405)
T ss_dssp HHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETT
T ss_pred HHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEe
Confidence 4677889999999986 4211111 1245556678999999986
No 216
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=97.92 E-value=4.2e-05 Score=75.33 Aligned_cols=102 Identities=19% Similarity=0.167 Sum_probs=70.1
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCC-----CeEEEEeCC----HHHHHH----HHHhcCCCCCCCCCCCCCceEEeCC
Q 014700 127 TNKVVVLGG-GSFGTAMAAHVANKKSQ-----LKVYMLMRD----PAVCQS----INEKHCNCRYFPEQKLPENVIATTD 192 (420)
Q Consensus 127 ~mkI~IIGa-GamG~alA~~La~aG~~-----~~V~l~~r~----~~~~~~----i~~~g~~~~~l~~~~l~~~i~a~td 192 (420)
.|||+|+|+ |.+|++++..|+..|.. .+|.++|++ +++++. +... . ..+...+..+++
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~--~------~~~~~~i~~~~~ 76 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDC--A------FPLLAGMTAHAD 76 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTT--T------CTTEEEEEEESS
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhh--c------ccccCcEEEecC
Confidence 579999998 99999999999987620 289999998 543332 2221 0 011235667788
Q ss_pred HHHhccCCcEEEEccCh----------------hhHHHHHHHhhhcCCCCCeEEEeccCC
Q 014700 193 AKTALLGADYCLHAMPV----------------QFSSSFLEGISDYVDPGLPFISLSKGL 236 (420)
Q Consensus 193 ~~eal~~aDiVIlaVp~----------------~~l~~vl~~i~~~l~~~~iVVs~snGi 236 (420)
..+++++||+||++... ..++++++.+..+-.++..+|..+|-+
T Consensus 77 ~~~al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv 136 (329)
T 1b8p_A 77 PMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPA 136 (329)
T ss_dssp HHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred cHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCch
Confidence 88999999999987531 124556666666544677888888744
No 217
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=97.91 E-value=4.3e-05 Score=75.91 Aligned_cols=96 Identities=13% Similarity=0.065 Sum_probs=68.1
Q ss_pred CCCeEEEEcccHHHHH-HHHHHHhcCCCCeEE-EEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhcc--CCc
Q 014700 126 RTNKVVVLGGGSFGTA-MAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GAD 201 (420)
Q Consensus 126 ~~mkI~IIGaGamG~a-lA~~La~aG~~~~V~-l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~--~aD 201 (420)
.++||+|||+|.||.. ++..|.+.. +.+|. +++++++.++.+.+... ...+++|+++++. +.|
T Consensus 4 ~~~rigiIG~G~~g~~~~~~~l~~~~-~~~l~av~d~~~~~~~~~a~~~~------------~~~~~~~~~~ll~~~~vD 70 (359)
T 3m2t_A 4 SLIKVGLVGIGAQMQENLLPSLLQMQ-DIRIVAACDSDLERARRVHRFIS------------DIPVLDNVPAMLNQVPLD 70 (359)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHTCT-TEEEEEEECSSHHHHGGGGGTSC------------SCCEESSHHHHHHHSCCS
T ss_pred CcceEEEECCCHHHHHHHHHHHHhCC-CcEEEEEEcCCHHHHHHHHHhcC------------CCcccCCHHHHhcCCCCC
Confidence 3579999999999984 888888763 26776 78999988776655310 2345678988876 469
Q ss_pred EEEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCCc
Q 014700 202 YCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLEL 238 (420)
Q Consensus 202 iVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~ 238 (420)
+|++|+|.....+++..... .++.|+ +-|.+..
T Consensus 71 ~V~i~tp~~~H~~~~~~al~---aGkhVl-~EKPla~ 103 (359)
T 3m2t_A 71 AVVMAGPPQLHFEMGLLAMS---KGVNVF-VEKPPCA 103 (359)
T ss_dssp EEEECSCHHHHHHHHHHHHH---TTCEEE-ECSCSCS
T ss_pred EEEEcCCcHHHHHHHHHHHH---CCCeEE-EECCCcC
Confidence 99999998887776665543 355544 4565543
No 218
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=97.91 E-value=1e-05 Score=76.96 Aligned_cols=91 Identities=11% Similarity=0.110 Sum_probs=65.6
Q ss_pred eEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEcc
Q 014700 129 KVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHAM 207 (420)
Q Consensus 129 kI~IIGaGamG~alA~~La~aG~~~-~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIlaV 207 (420)
+|+|||+|.||.+++..|.+.| . +|++++|++++++.+.+.. +....++++++++++|+||.|+
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G--~~~I~v~nR~~~ka~~la~~~-------------~~~~~~~~~~~~~~aDiVInat 174 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMG--VKDIWVVNRTIERAKALDFPV-------------KIFSLDQLDEVVKKAKSLFNTT 174 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTT--CCCEEEEESCHHHHHTCCSSC-------------EEEEGGGHHHHHHTCSEEEECS
T ss_pred eEEEECcHHHHHHHHHHHHHcC--CCEEEEEeCCHHHHHHHHHHc-------------ccCCHHHHHhhhcCCCEEEECC
Confidence 9999999999999999999998 5 8999999998766654321 1123456777788999999999
Q ss_pred ChhhHHHHHHHh-hhcCCCCCeEEEeccC
Q 014700 208 PVQFSSSFLEGI-SDYVDPGLPFISLSKG 235 (420)
Q Consensus 208 p~~~l~~vl~~i-~~~l~~~~iVVs~snG 235 (420)
|..-..+. ..+ ...++++++|+++.-+
T Consensus 175 p~gm~p~~-~~i~~~~l~~~~~V~Divy~ 202 (253)
T 3u62_A 175 SVGMKGEE-LPVSDDSLKNLSLVYDVIYF 202 (253)
T ss_dssp STTTTSCC-CSCCHHHHTTCSEEEECSSS
T ss_pred CCCCCCCC-CCCCHHHhCcCCEEEEeeCC
Confidence 85211000 011 2235678899998876
No 219
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=97.90 E-value=6.9e-05 Score=74.05 Aligned_cols=95 Identities=14% Similarity=0.166 Sum_probs=65.7
Q ss_pred hcCCCeEEEEcccHHHHH-HHHHHHhcCCCCeEE-EEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccC--
Q 014700 124 LERTNKVVVLGGGSFGTA-MAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLG-- 199 (420)
Q Consensus 124 ~~~~mkI~IIGaGamG~a-lA~~La~aG~~~~V~-l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~-- 199 (420)
|+.++||+|||+|.||.. .+..|.+.. +.+|. ++++++++++ +.. ..+.+++|+++++.+
T Consensus 4 M~~~~rvgiiG~G~~g~~~~~~~~~~~~-~~~l~av~d~~~~~~~---~~~------------~~~~~~~~~~~ll~~~~ 67 (352)
T 3kux_A 4 MADKIKVGLLGYGYASKTFHAPLIMGTP-GLELAGVSSSDASKVH---ADW------------PAIPVVSDPQMLFNDPS 67 (352)
T ss_dssp TTCCEEEEEECCSHHHHHTHHHHHHTST-TEEEEEEECSCHHHHH---TTC------------SSCCEESCHHHHHHCSS
T ss_pred ccCCceEEEECCCHHHHHHHHHHHhhCC-CcEEEEEECCCHHHHH---hhC------------CCCceECCHHHHhcCCC
Confidence 555689999999999996 677777653 26765 7889987654 211 123567799998764
Q ss_pred CcEEEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCCc
Q 014700 200 ADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLEL 238 (420)
Q Consensus 200 aDiVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~ 238 (420)
.|+|++|+|.....+++..... .++.|+ +-|.+..
T Consensus 68 vD~V~i~tp~~~H~~~~~~al~---aGkhV~-~EKPla~ 102 (352)
T 3kux_A 68 IDLIVIPTPNDTHFPLAQSALA---AGKHVV-VDKPFTV 102 (352)
T ss_dssp CCEEEECSCTTTHHHHHHHHHH---TTCEEE-ECSSCCS
T ss_pred CCEEEEeCChHHHHHHHHHHHH---CCCcEE-EECCCcC
Confidence 8999999998877666655443 455554 4565443
No 220
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=97.90 E-value=2e-05 Score=81.62 Aligned_cols=119 Identities=17% Similarity=0.256 Sum_probs=74.3
Q ss_pred CeEEEEcccHHHHHHH--HHHHhc----CCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCc
Q 014700 128 NKVVVLGGGSFGTAMA--AHVANK----KSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGAD 201 (420)
Q Consensus 128 mkI~IIGaGamG~alA--~~La~a----G~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aD 201 (420)
|||+|||+|++|.+.. ..|+.. +...+|.++|.++++++........ .......+..+..++|.++++++||
T Consensus 1 mKI~iIGaGs~~~t~~l~~~~~~~~~l~~~~~ei~L~Di~~~rl~~~~~~~~~--~~~~~~~~~~i~~t~d~~eAl~gAD 78 (477)
T 3u95_A 1 MKISIVGAGSVRFALQLVEDIAQTDELSREDTHIYLMDVHERRLNASYILARK--YVEELNSPVKVVKTESLDEAIEGAD 78 (477)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTCTTTCSTTCEEEEECSCHHHHHHHHHHHHH--HHHHHTCCCEEEEESCHHHHHTTCS
T ss_pred CEEEEECCCchhhHHHHHHHHHhhHhcCCCCCEEEEECCCHHHHHHHHHHHHH--HHHHcCCCeEEEEeCCHHHHhCCCC
Confidence 7999999999886532 223332 1124799999999865432211000 0000112335788999999999999
Q ss_pred EEEEccCh-------------------------------h-------------------hHHHHHHHhhhcCCCCCeEEE
Q 014700 202 YCLHAMPV-------------------------------Q-------------------FSSSFLEGISDYVDPGLPFIS 231 (420)
Q Consensus 202 iVIlaVp~-------------------------------~-------------------~l~~vl~~i~~~l~~~~iVVs 231 (420)
+||+++-. + .+.++++.+..+. |++.+++
T Consensus 79 ~Vi~~~g~~~~Rvg~~~~r~~de~~~ip~k~G~~~~~l~qet~g~gG~~~~lR~~~~i~v~~~i~~~i~~~~-P~A~~in 157 (477)
T 3u95_A 79 FIINTAYPYDPRYHDSGSQRWDEVTKVGEKHGYYRGIDSQELNMVSTYTYVLSSYPDVKLALEIAEKMKKMA-PKAYLMQ 157 (477)
T ss_dssp EEEECCCCCCTTTCSSHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTSCSTTTTHHHHHHHHHHHHHHHHHC-TTCEEEE
T ss_pred EEEECcccccccccccccccceeeeccCcccceeecccccccCCccchhHHHhhhhhHHHHHHHHHHHHhhC-CCeEEEE
Confidence 99998610 0 1245666666654 7899999
Q ss_pred eccCCCcchhhhHHHHHHHHhCC
Q 014700 232 LSKGLELNTLRMMSQIIPQALRN 254 (420)
Q Consensus 232 ~snGi~~~t~~~~se~l~~~lg~ 254 (420)
.+|-+. .+.+.+.+..+.
T Consensus 158 ~tNP~~-----i~t~a~~~~~~~ 175 (477)
T 3u95_A 158 TANPVF-----EITQAVRRWTGA 175 (477)
T ss_dssp CSSCHH-----HHHHHHHHHHCC
T ss_pred ecChHH-----HHHHHHHHhCCC
Confidence 999654 345566565443
No 221
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=97.88 E-value=6.4e-05 Score=75.38 Aligned_cols=93 Identities=17% Similarity=0.186 Sum_probs=67.9
Q ss_pred CCeEEEEccc-HHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhcc--CCcE
Q 014700 127 TNKVVVLGGG-SFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GADY 202 (420)
Q Consensus 127 ~mkI~IIGaG-amG~alA~~La~aG~~~~V~-l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~--~aDi 202 (420)
++||+|||+| .||..++..|.+.. +.+|. +++++++..+.+.+.. ++..++|+++++. +.|+
T Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~-~~~l~av~d~~~~~~~~~a~~~-------------g~~~~~~~~ell~~~~vD~ 67 (387)
T 3moi_A 2 KIRFGICGLGFAGSVLMAPAMRHHP-DAQIVAACDPNEDVRERFGKEY-------------GIPVFATLAEMMQHVQMDA 67 (387)
T ss_dssp CEEEEEECCSHHHHTTHHHHHHHCT-TEEEEEEECSCHHHHHHHHHHH-------------TCCEESSHHHHHHHSCCSE
T ss_pred ceEEEEEeCCHHHHHHHHHHHHhCC-CeEEEEEEeCCHHHHHHHHHHc-------------CCCeECCHHHHHcCCCCCE
Confidence 5799999999 99999999998764 25665 7899998887776542 2345678888876 5999
Q ss_pred EEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCC
Q 014700 203 CLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (420)
Q Consensus 203 VIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~ 237 (420)
|++|+|.....+++..... .++.|+ +-|.+.
T Consensus 68 V~i~tp~~~H~~~~~~al~---aGk~Vl-~EKP~a 98 (387)
T 3moi_A 68 VYIASPHQFHCEHVVQASE---QGLHII-VEKPLT 98 (387)
T ss_dssp EEECSCGGGHHHHHHHHHH---TTCEEE-ECSCCC
T ss_pred EEEcCCcHHHHHHHHHHHH---CCCcee-eeCCcc
Confidence 9999998877666655443 345444 445443
No 222
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=97.88 E-value=3e-05 Score=79.15 Aligned_cols=92 Identities=14% Similarity=0.007 Sum_probs=68.7
Q ss_pred cCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEE
Q 014700 125 ERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (420)
Q Consensus 125 ~~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVI 204 (420)
-..++|+|||+|.+|..+|..|...| .+|+++++++.........| +.. .+++++++.+|+|+
T Consensus 245 L~GKTVgVIG~G~IGr~vA~~lrafG--a~Viv~d~dp~~a~~A~~~G--------------~~v-v~LeElL~~ADIVv 307 (464)
T 3n58_A 245 MAGKVAVVCGYGDVGKGSAQSLAGAG--ARVKVTEVDPICALQAAMDG--------------FEV-VTLDDAASTADIVV 307 (464)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSHHHHHHHHHTT--------------CEE-CCHHHHGGGCSEEE
T ss_pred ccCCEEEEECcCHHHHHHHHHHHHCC--CEEEEEeCCcchhhHHHhcC--------------cee-ccHHHHHhhCCEEE
Confidence 34689999999999999999999887 89999999886543333322 122 36889999999999
Q ss_pred EccChhhHHHHH-HHhhhcCCCCCeEEEeccCC
Q 014700 205 HAMPVQFSSSFL-EGISDYVDPGLPFISLSKGL 236 (420)
Q Consensus 205 laVp~~~l~~vl-~~i~~~l~~~~iVVs~snGi 236 (420)
.++....+ + ++....++++.+||++..|-
T Consensus 308 ~atgt~~l---I~~e~l~~MK~GAILINvGRgd 337 (464)
T 3n58_A 308 TTTGNKDV---ITIDHMRKMKDMCIVGNIGHFD 337 (464)
T ss_dssp ECCSSSSS---BCHHHHHHSCTTEEEEECSSST
T ss_pred ECCCCccc---cCHHHHhcCCCCeEEEEcCCCC
Confidence 98765432 2 23345578899999988763
No 223
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=97.85 E-value=5.3e-05 Score=77.02 Aligned_cols=99 Identities=16% Similarity=0.196 Sum_probs=67.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHh-ccCCcEEEE
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTA-LLGADYCLH 205 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~ea-l~~aDiVIl 205 (420)
.++|.|+|+|.+|..++..|.+.| ++|++++++++.++.+.+.|.... ..+..-+ ..++++ +.+||+||+
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g--~~vvvId~d~~~v~~~~~~g~~vi-~GDat~~------~~L~~agi~~A~~viv 74 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSG--VKMVVLDHDPDHIETLRKFGMKVF-YGDATRM------DLLESAGAAKAEVLIN 74 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTT--CCEEEEECCHHHHHHHHHTTCCCE-ESCTTCH------HHHHHTTTTTCSEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC--CCEEEEECCHHHHHHHHhCCCeEE-EcCCCCH------HHHHhcCCCccCEEEE
Confidence 468999999999999999999998 999999999999999887664321 1111100 012333 678999999
Q ss_pred ccChhhHHHHHHHhhhcCCCCCeEEEecc
Q 014700 206 AMPVQFSSSFLEGISDYVDPGLPFISLSK 234 (420)
Q Consensus 206 aVp~~~l~~vl~~i~~~l~~~~iVVs~sn 234 (420)
+++.......+-.....+.++..||.-++
T Consensus 75 ~~~~~~~n~~i~~~ar~~~p~~~Iiara~ 103 (413)
T 3l9w_A 75 AIDDPQTNLQLTEMVKEHFPHLQIIARAR 103 (413)
T ss_dssp CCSSHHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred CCCChHHHHHHHHHHHHhCCCCeEEEEEC
Confidence 99976543333333333445545554444
No 224
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=97.85 E-value=3.9e-05 Score=78.30 Aligned_cols=99 Identities=10% Similarity=0.149 Sum_probs=68.2
Q ss_pred CCCeEEEEcccHHHH-HHHHHHHhcCCCCeE-EEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhcc--CCc
Q 014700 126 RTNKVVVLGGGSFGT-AMAAHVANKKSQLKV-YMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GAD 201 (420)
Q Consensus 126 ~~mkI~IIGaGamG~-alA~~La~aG~~~~V-~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~--~aD 201 (420)
.++||+|||+|.||. .++..|.+.. +.+| .+++++++..+.+.+..... ...+..++|.++++. ++|
T Consensus 82 ~~irigiIG~G~~g~~~~~~~l~~~~-~~~lvav~d~~~~~~~~~a~~~g~~--------~~~~~~~~~~~~ll~~~~vD 152 (433)
T 1h6d_A 82 RRFGYAIVGLGKYALNQILPGFAGCQ-HSRIEALVSGNAEKAKIVAAEYGVD--------PRKIYDYSNFDKIAKDPKID 152 (433)
T ss_dssp CCEEEEEECCSHHHHHTHHHHTTTCS-SEEEEEEECSCHHHHHHHHHHTTCC--------GGGEECSSSGGGGGGCTTCC
T ss_pred CceEEEEECCcHHHHHHHHHHHhhCC-CcEEEEEEcCCHHHHHHHHHHhCCC--------cccccccCCHHHHhcCCCCC
Confidence 357999999999997 8999887753 2565 47899998887776642100 012344568888776 689
Q ss_pred EEEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCC
Q 014700 202 YCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (420)
Q Consensus 202 iVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~ 237 (420)
+|++|+|.....+++..... .++.|+ +-|.+.
T Consensus 153 ~V~iatp~~~h~~~~~~al~---aGk~Vl-~EKPla 184 (433)
T 1h6d_A 153 AVYIILPNSLHAEFAIRAFK---AGKHVM-CEKPMA 184 (433)
T ss_dssp EEEECSCGGGHHHHHHHHHH---TTCEEE-ECSSCC
T ss_pred EEEEcCCchhHHHHHHHHHH---CCCcEE-EcCCCC
Confidence 99999999887776665543 455444 345443
No 225
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=97.84 E-value=7.4e-05 Score=72.32 Aligned_cols=153 Identities=14% Similarity=0.140 Sum_probs=91.0
Q ss_pred hhcCCCeEEEEc-ccHHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCC
Q 014700 123 ILERTNKVVVLG-GGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGA 200 (420)
Q Consensus 123 ~~~~~mkI~IIG-aGamG~alA~~La~aG~~~~V~-l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~a 200 (420)
.|..++||+|+| .|.||..++..+.+.. +.++. +++++... ..|.....+-+.. +.++.+++|+++++.++
T Consensus 17 ~m~~~irV~V~Ga~GrMGr~i~~~v~~~~-~~eLvg~vd~~~~~-----~~G~d~gel~G~~-~~gv~v~~dl~~ll~~a 89 (288)
T 3ijp_A 17 QGPGSMRLTVVGANGRMGRELITAIQRRK-DVELCAVLVRKGSS-----FVDKDASILIGSD-FLGVRITDDPESAFSNT 89 (288)
T ss_dssp ----CEEEEESSTTSHHHHHHHHHHHTCS-SEEEEEEBCCTTCT-----TTTSBGGGGTTCS-CCSCBCBSCHHHHTTSC
T ss_pred hccCCeEEEEECCCCHHHHHHHHHHHhCC-CCEEEEEEecCCcc-----ccccchHHhhccC-cCCceeeCCHHHHhcCC
Confidence 455678999999 8999999999988753 36655 45665321 0111111111111 23566778999989999
Q ss_pred cEEEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCeEEEECcccHHHHhhcCCeEEE
Q 014700 201 DYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMV 280 (420)
Q Consensus 201 DiVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~~vl~GP~~a~ev~~g~~t~i~ 280 (420)
|+||-+++.....+.+..... .+..+|..+.|+..+.. +.+.+... ...++..|++...+..
T Consensus 90 DVvIDFT~p~a~~~~~~~~l~---~Gv~vViGTTG~~~e~~----~~L~~aa~----~~~~~~a~N~SiGv~l------- 151 (288)
T 3ijp_A 90 EGILDFSQPQASVLYANYAAQ---KSLIHIIGTTGFSKTEE----AQIADFAK----YTTIVKSGNMSLGVNL------- 151 (288)
T ss_dssp SEEEECSCHHHHHHHHHHHHH---HTCEEEECCCCCCHHHH----HHHHHHHT----TSEEEECSCCCHHHHH-------
T ss_pred CEEEEcCCHHHHHHHHHHHHH---cCCCEEEECCCCCHHHH----HHHHHHhC----cCCEEEECCCcHHHHH-------
Confidence 999988887766655555443 46677777888865432 23444322 2457889998764311
Q ss_pred EecCCHHHHHHHHHHHhcCCceEEE
Q 014700 281 VASKDRKLANAVQQLLASKHLRIST 305 (420)
Q Consensus 281 ia~~d~e~~~~l~~ll~~~g~~v~~ 305 (420)
-.+.++++.+.|. .++.+.+
T Consensus 152 ----l~~l~~~aa~~l~-~~~dieI 171 (288)
T 3ijp_A 152 ----LANLVKRAAKALD-DDFDIEI 171 (288)
T ss_dssp ----HHHHHHHHHHHSC-TTSEEEE
T ss_pred ----HHHHHHHHHHhcC-CCCCEEE
Confidence 0244566777775 2444443
No 226
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=97.83 E-value=8.1e-05 Score=74.01 Aligned_cols=97 Identities=8% Similarity=0.012 Sum_probs=67.7
Q ss_pred hcCCCeEEEEcccHHHH-HHHHHHHhcCCCCeEE-EEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccC--
Q 014700 124 LERTNKVVVLGGGSFGT-AMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLG-- 199 (420)
Q Consensus 124 ~~~~mkI~IIGaGamG~-alA~~La~aG~~~~V~-l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~-- 199 (420)
|+.++||+|||+|.+|. .++..|...+ .+|. +++++++.++.+.+... ...+++|+++++.+
T Consensus 23 Mm~~irvgiiG~G~~~~~~~~~~~~~~~--~~lvav~d~~~~~a~~~a~~~~------------~~~~~~~~~~ll~~~~ 88 (361)
T 3u3x_A 23 MMDELRFAAVGLNHNHIYGQVNCLLRAG--ARLAGFHEKDDALAAEFSAVYA------------DARRIATAEEILEDEN 88 (361)
T ss_dssp ---CCEEEEECCCSTTHHHHHHHHHHTT--CEEEEEECSCHHHHHHHHHHSS------------SCCEESCHHHHHTCTT
T ss_pred hccCcEEEEECcCHHHHHHHHHHhhcCC--cEEEEEEcCCHHHHHHHHHHcC------------CCcccCCHHHHhcCCC
Confidence 55567999999999994 5677776655 7755 78999998888876521 12456799998764
Q ss_pred CcEEEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCCc
Q 014700 200 ADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLEL 238 (420)
Q Consensus 200 aDiVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~ 238 (420)
.|+|++|+|.....+++..... .++-|+ +-|.+..
T Consensus 89 vD~V~I~tp~~~H~~~~~~al~---aGkhVl-~EKPla~ 123 (361)
T 3u3x_A 89 IGLIVSAAVSSERAELAIRAMQ---HGKDVL-VDKPGMT 123 (361)
T ss_dssp CCEEEECCCHHHHHHHHHHHHH---TTCEEE-EESCSCS
T ss_pred CCEEEEeCChHHHHHHHHHHHH---CCCeEE-EeCCCCC
Confidence 8999999998877666655543 355444 4565543
No 227
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=97.82 E-value=4.8e-05 Score=74.55 Aligned_cols=94 Identities=12% Similarity=0.049 Sum_probs=65.8
Q ss_pred CCCeEEEEcccHHHH-HHHHHHHhcCCCCeE-EEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhcc--CCc
Q 014700 126 RTNKVVVLGGGSFGT-AMAAHVANKKSQLKV-YMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GAD 201 (420)
Q Consensus 126 ~~mkI~IIGaGamG~-alA~~La~aG~~~~V-~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~--~aD 201 (420)
+++||+|||+|.+|. .++..|...+ .+| .+++++++.++.+.+... .+.+.+|+++++. +.|
T Consensus 3 ~~~rvgiiG~G~~~~~~~~~~l~~~~--~~lvav~d~~~~~~~~~a~~~~------------~~~~~~~~~~ll~~~~~D 68 (336)
T 2p2s_A 3 KKIRFAAIGLAHNHIYDMCQQLIDAG--AELAGVFESDSDNRAKFTSLFP------------SVPFAASAEQLITDASID 68 (336)
T ss_dssp -CCEEEEECCSSTHHHHHHHHHHHTT--CEEEEEECSCTTSCHHHHHHST------------TCCBCSCHHHHHTCTTCC
T ss_pred CccEEEEECCChHHHHHhhhhhcCCC--cEEEEEeCCCHHHHHHHHHhcC------------CCcccCCHHHHhhCCCCC
Confidence 357999999999996 6777776655 775 588999888777766421 1234568888876 689
Q ss_pred EEEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCC
Q 014700 202 YCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (420)
Q Consensus 202 iVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~ 237 (420)
+|++|+|.....+++..... .++.|+ +-|.+.
T Consensus 69 ~V~i~tp~~~h~~~~~~al~---aGkhVl-~EKP~a 100 (336)
T 2p2s_A 69 LIACAVIPCDRAELALRTLD---AGKDFF-TAKPPL 100 (336)
T ss_dssp EEEECSCGGGHHHHHHHHHH---TTCEEE-ECSSCC
T ss_pred EEEEeCChhhHHHHHHHHHH---CCCcEE-EeCCCC
Confidence 99999998877666655433 455444 345443
No 228
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=97.82 E-value=0.00068 Score=69.37 Aligned_cols=107 Identities=15% Similarity=0.174 Sum_probs=66.3
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHHh--cC--CCCCCCCC-CC-----CCceEEeCCHH
Q 014700 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEK--HC--NCRYFPEQ-KL-----PENVIATTDAK 194 (420)
Q Consensus 126 ~~mkI~IIGaGamG~alA~~La~aG~~~~V~-l~~r~~~~~~~i~~~--g~--~~~~l~~~-~l-----~~~i~a~td~~ 194 (420)
+.+||||||+|.||..++..+.+.. +.+|. +++++++.++...+. |. ......+. .+ .....+++|.+
T Consensus 22 k~IRVGIIGaG~iG~~~~~~l~~~~-~veLvAV~D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v~~D~e 100 (446)
T 3upl_A 22 KPIRIGLIGAGEMGTDIVTQVARMQ-GIEVGALSARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAGKIAVTDDND 100 (446)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTSS-SEEEEEEECSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEEESCHH
T ss_pred CceEEEEECChHHHHHHHHHHhhCC-CcEEEEEEeCCHHHHHHHHHHhcCCccccccccchhhhhhhhccCCceEECCHH
Confidence 3579999999999999999887642 25555 678998887776543 30 00000000 00 11356788999
Q ss_pred Hhcc--CCcEEEEccChh-hHHHHHHHhhhcCCCCCeEEEeccCC
Q 014700 195 TALL--GADYCLHAMPVQ-FSSSFLEGISDYVDPGLPFISLSKGL 236 (420)
Q Consensus 195 eal~--~aDiVIlaVp~~-~l~~vl~~i~~~l~~~~iVVs~snGi 236 (420)
+.+. +.|+|++|+|.. ...++... .++.++-|++..+++
T Consensus 101 eLL~d~dIDaVviaTp~p~~H~e~a~~---AL~AGKHVv~~nk~l 142 (446)
T 3upl_A 101 LILSNPLIDVIIDATGIPEVGAETGIA---AIRNGKHLVMMNVEA 142 (446)
T ss_dssp HHHTCTTCCEEEECSCCHHHHHHHHHH---HHHTTCEEEECCHHH
T ss_pred HHhcCCCCCEEEEcCCChHHHHHHHHH---HHHcCCcEEecCccc
Confidence 9876 589999999864 33333322 233567777655443
No 229
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=97.82 E-value=7e-05 Score=75.58 Aligned_cols=102 Identities=16% Similarity=0.137 Sum_probs=69.2
Q ss_pred chhhcCCCeEEEEcccHHHHHHHHHHHhcCC-------CCeEE-EEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCC
Q 014700 121 TDILERTNKVVVLGGGSFGTAMAAHVANKKS-------QLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTD 192 (420)
Q Consensus 121 ~~~~~~~mkI~IIGaGamG~alA~~La~aG~-------~~~V~-l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td 192 (420)
.+.|++.+||||||+|.||...+..|.+.+. +.+|. ++|++++.++++.+.... .++++|
T Consensus 20 ~~~Ms~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~------------~~~y~d 87 (412)
T 4gqa_A 20 FQSMSARLNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGA------------EKAYGD 87 (412)
T ss_dssp -----CEEEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTC------------SEEESS
T ss_pred cccccccceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCC------------CeEECC
Confidence 3456667899999999999998888876420 13555 678999988888765311 146778
Q ss_pred HHHhcc--CCcEEEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCCc
Q 014700 193 AKTALL--GADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLEL 238 (420)
Q Consensus 193 ~~eal~--~aDiVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~ 238 (420)
.++.+. +.|+|++|+|.....+++..... .++-|+ +-|.+..
T Consensus 88 ~~~ll~~~~vD~V~I~tp~~~H~~~~~~al~---aGkhVl-~EKP~a~ 131 (412)
T 4gqa_A 88 WRELVNDPQVDVVDITSPNHLHYTMAMAAIA---AGKHVY-CEKPLAV 131 (412)
T ss_dssp HHHHHHCTTCCEEEECSCGGGHHHHHHHHHH---TTCEEE-EESCSCS
T ss_pred HHHHhcCCCCCEEEECCCcHHHHHHHHHHHH---cCCCeE-eecCCcC
Confidence 998875 58999999998877666655443 355444 5666554
No 230
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=97.80 E-value=2.8e-05 Score=80.15 Aligned_cols=79 Identities=16% Similarity=0.267 Sum_probs=57.5
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCC-CCCCCCCCceEEeCCHHHh-ccCCcEE
Q 014700 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRY-FPEQKLPENVIATTDAKTA-LLGADYC 203 (420)
Q Consensus 126 ~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~-l~~~~l~~~i~a~td~~ea-l~~aDiV 203 (420)
+.|||.|+|+|.+|..+|..|...| |+|++.+.+++.++.+.+.. .... .++..-+ +.++++ +++||++
T Consensus 2 ~~M~iiI~G~G~vG~~la~~L~~~~--~~v~vId~d~~~~~~~~~~~-~~~~i~Gd~~~~------~~L~~Agi~~ad~~ 72 (461)
T 4g65_A 2 NAMKIIILGAGQVGGTLAENLVGEN--NDITIVDKDGDRLRELQDKY-DLRVVNGHASHP------DVLHEAGAQDADML 72 (461)
T ss_dssp CCEEEEEECCSHHHHHHHHHTCSTT--EEEEEEESCHHHHHHHHHHS-SCEEEESCTTCH------HHHHHHTTTTCSEE
T ss_pred CcCEEEEECCCHHHHHHHHHHHHCC--CCEEEEECCHHHHHHHHHhc-CcEEEEEcCCCH------HHHHhcCCCcCCEE
Confidence 4689999999999999999999988 99999999999998887642 1111 1110000 123444 6789999
Q ss_pred EEccChhhHH
Q 014700 204 LHAMPVQFSS 213 (420)
Q Consensus 204 IlaVp~~~l~ 213 (420)
|.++.++..-
T Consensus 73 ia~t~~De~N 82 (461)
T 4g65_A 73 VAVTNTDETN 82 (461)
T ss_dssp EECCSCHHHH
T ss_pred EEEcCChHHH
Confidence 9999876543
No 231
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=97.79 E-value=4.1e-05 Score=74.37 Aligned_cols=97 Identities=13% Similarity=0.208 Sum_probs=67.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEE
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~-~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIl 205 (420)
.++|.|||+|.||.+++..|++.| . +|++|+|+.++++.+.+.... . .. .+...+++.+.+.++|+||.
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~G--~~~V~v~nR~~~ka~~la~~~~~-~------~~-~~~~~~~~~~~~~~aDivIn 210 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLSTA--AERIDMANRTVEKAERLVREGDE-R------RS-AYFSLAEAETRLAEYDIIIN 210 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTT--CSEEEEECSSHHHHHHHHHHSCS-S------SC-CEECHHHHHHTGGGCSEEEE
T ss_pred CCEEEEECcHHHHHHHHHHHHHCC--CCEEEEEeCCHHHHHHHHHHhhh-c------cC-ceeeHHHHHhhhccCCEEEE
Confidence 579999999999999999999988 6 999999999988888764210 0 00 11111345666789999999
Q ss_pred ccChhhHHHH--HHHh-hhcCCCCCeEEEecc
Q 014700 206 AMPVQFSSSF--LEGI-SDYVDPGLPFISLSK 234 (420)
Q Consensus 206 aVp~~~l~~v--l~~i-~~~l~~~~iVVs~sn 234 (420)
|+|....... + .+ ...++++.+++++.-
T Consensus 211 ~t~~~~~~~~~~~-~i~~~~l~~~~~v~D~~y 241 (297)
T 2egg_A 211 TTSVGMHPRVEVQ-PLSLERLRPGVIVSDIIY 241 (297)
T ss_dssp CSCTTCSSCCSCC-SSCCTTCCTTCEEEECCC
T ss_pred CCCCCCCCCCCCC-CCCHHHcCCCCEEEEcCC
Confidence 9996432100 0 01 234667888888764
No 232
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=97.78 E-value=8.3e-05 Score=72.84 Aligned_cols=99 Identities=23% Similarity=0.302 Sum_probs=65.1
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhc-CCCCeEEEEeCCHH---HHHHHHHhcCCCCCCCCCCCCCceEEe--CCHHHhccCC
Q 014700 128 NKVVVLG-GGSFGTAMAAHVANK-KSQLKVYMLMRDPA---VCQSINEKHCNCRYFPEQKLPENVIAT--TDAKTALLGA 200 (420)
Q Consensus 128 mkI~IIG-aGamG~alA~~La~a-G~~~~V~l~~r~~~---~~~~i~~~g~~~~~l~~~~l~~~i~a~--td~~eal~~a 200 (420)
|||+||| +|.+|.+++..|+.. +...++.++|+++. .+..+. +. ..+..+... ++..+++++|
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~~~~G~a~Dl~--~~--------~~~~~v~~~~~~~~~~~~~~a 70 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLS--HI--------PTAVKIKGFSGEDATPALEGA 70 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTTHHHHHHHHH--TS--------CSSEEEEEECSSCCHHHHTTC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCCCchhHHHHhh--CC--------CCCceEEEecCCCcHHHhCCC
Confidence 7999999 899999999999876 44468999999861 112222 11 112233331 2445668999
Q ss_pred cEEEEccChh----------------hHHHHHHHhhhcCCCCCeEEEeccCCC
Q 014700 201 DYCLHAMPVQ----------------FSSSFLEGISDYVDPGLPFISLSKGLE 237 (420)
Q Consensus 201 DiVIlaVp~~----------------~l~~vl~~i~~~l~~~~iVVs~snGi~ 237 (420)
|+||++.... .++++.+.+.++ .++.+++..+|-++
T Consensus 71 Divii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~-~p~a~vlvvtNPvd 122 (312)
T 3hhp_A 71 DVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKT-CPKACIGIITNPVN 122 (312)
T ss_dssp SEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEECSSCHH
T ss_pred CEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCcEEEEecCcch
Confidence 9999986321 244555666665 36778888887543
No 233
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=97.78 E-value=8.5e-05 Score=71.89 Aligned_cols=105 Identities=16% Similarity=0.153 Sum_probs=72.0
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhcc--CCcE
Q 014700 126 RTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GADY 202 (420)
Q Consensus 126 ~~mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~--~aDi 202 (420)
..+||+|+|+ |.||...+..|.+.| +++ ++..++... +. . ..++.+..+++++.+ ++|+
T Consensus 6 ~~~rVaViG~sG~~G~~~~~~l~~~g--~~~-V~~V~p~~~------g~--~-------~~G~~vy~sl~el~~~~~~D~ 67 (288)
T 2nu8_A 6 KNTKVICQGFTGSQGTFHSEQAIAYG--TKM-VGGVTPGKG------GT--T-------HLGLPVFNTVREAVAATGATA 67 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHT--CEE-EEEECTTCT------TC--E-------ETTEEEESSHHHHHHHHCCCE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCC--CeE-EEEeCCCcc------cc--e-------eCCeeccCCHHHHhhcCCCCE
Confidence 3579999998 999999999999887 673 344444210 00 0 014567788988877 8999
Q ss_pred EEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHH
Q 014700 203 CLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQ 250 (420)
Q Consensus 203 VIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~ 250 (420)
+++++|.....+++++.... . -..+|.++.|+..+..+.+.+..++
T Consensus 68 viI~tP~~~~~~~~~ea~~~-G-i~~iVi~t~G~~~~~~~~l~~~A~~ 113 (288)
T 2nu8_A 68 SVIYVPAPFCKDSILEAIDA-G-IKLIITITEGIPTLDMLTVKVKLDE 113 (288)
T ss_dssp EEECCCGGGHHHHHHHHHHT-T-CSEEEECCCCCCHHHHHHHHHHHHH
T ss_pred EEEecCHHHHHHHHHHHHHC-C-CCEEEEECCCCCHHHHHHHHHHHHH
Confidence 99999999988888887653 1 1345557778875433344444443
No 234
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=97.77 E-value=0.00024 Score=70.67 Aligned_cols=92 Identities=16% Similarity=0.225 Sum_probs=63.7
Q ss_pred CCCeEEEEcccHHHHH-HHHHHHhcCCCCeEE-EEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhcc--CCc
Q 014700 126 RTNKVVVLGGGSFGTA-MAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GAD 201 (420)
Q Consensus 126 ~~mkI~IIGaGamG~a-lA~~La~aG~~~~V~-l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~--~aD 201 (420)
.++||+|||+|.||.. .+..|.+.. +.+|. ++++++++++ +.. ..+.+++|+++++. +.|
T Consensus 6 ~~~rvgiiG~G~~g~~~~~~~l~~~~-~~~l~av~d~~~~~~~---~~~------------~~~~~~~~~~~ll~~~~~D 69 (364)
T 3e82_A 6 NTINIALIGYGFVGKTFHAPLIRSVP-GLNLAFVASRDEEKVK---RDL------------PDVTVIASPEAAVQHPDVD 69 (364)
T ss_dssp -CEEEEEECCSHHHHHTHHHHHHTST-TEEEEEEECSCHHHHH---HHC------------TTSEEESCHHHHHTCTTCS
T ss_pred CcceEEEECCCHHHHHHHHHHHhhCC-CeEEEEEEcCCHHHHH---hhC------------CCCcEECCHHHHhcCCCCC
Confidence 3579999999999996 666776652 26775 7789987644 221 12466789999887 689
Q ss_pred EEEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCC
Q 014700 202 YCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (420)
Q Consensus 202 iVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~ 237 (420)
+|++|+|.....+++..... .++.|+ +-|.+.
T Consensus 70 ~V~i~tp~~~H~~~~~~al~---aGk~Vl-~EKPla 101 (364)
T 3e82_A 70 LVVIASPNATHAPLARLALN---AGKHVV-VDKPFT 101 (364)
T ss_dssp EEEECSCGGGHHHHHHHHHH---TTCEEE-ECSCSC
T ss_pred EEEEeCChHHHHHHHHHHHH---CCCcEE-EeCCCc
Confidence 99999998877666655433 455554 456444
No 235
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=97.76 E-value=5e-05 Score=74.89 Aligned_cols=93 Identities=13% Similarity=0.112 Sum_probs=61.2
Q ss_pred CCeEEEEcccHHHHHHHHH-H-HhcCCCCeEE-EEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccC--Cc
Q 014700 127 TNKVVVLGGGSFGTAMAAH-V-ANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLG--AD 201 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~-L-a~aG~~~~V~-l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~--aD 201 (420)
++||+|||+|.||..+... + .... +.+|. +++++++..+...+. .++.+++|+++++.+ .|
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~~~~~~~-~~~l~av~d~~~~~~~~~~~~-------------~~~~~~~~~~~ll~~~~~D 67 (345)
T 3f4l_A 2 VINCAFIGFGKSTTRYHLPYVLNRKD-SWHVAHIFRRHAKPEEQAPIY-------------SHIHFTSDLDEVLNDPDVK 67 (345)
T ss_dssp CEEEEEECCSHHHHHHTHHHHTTCTT-TEEEEEEECSSCCGGGGSGGG-------------TTCEEESCTHHHHTCTTEE
T ss_pred ceEEEEEecCHHHHHHHHHHHHhcCC-CeEEEEEEcCCHhHHHHHHhc-------------CCCceECCHHHHhcCCCCC
Confidence 5799999999999864333 4 3321 36777 788887644221111 134667899998775 89
Q ss_pred EEEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCC
Q 014700 202 YCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (420)
Q Consensus 202 iVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~ 237 (420)
+|++|+|.....+++..... .++.|+ +-|.+.
T Consensus 68 ~V~i~tp~~~h~~~~~~al~---aGk~Vl-~EKP~a 99 (345)
T 3f4l_A 68 LVVVCTHADSHFEYAKRALE---AGKNVL-VEKPFT 99 (345)
T ss_dssp EEEECSCGGGHHHHHHHHHH---TTCEEE-ECSSSC
T ss_pred EEEEcCChHHHHHHHHHHHH---cCCcEE-EeCCCC
Confidence 99999998877666655443 455555 456443
No 236
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=97.74 E-value=8.5e-06 Score=78.60 Aligned_cols=93 Identities=13% Similarity=0.111 Sum_probs=63.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEE
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~-~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIl 205 (420)
.++|.|||+|.+|.+++..|++.| . +|++++|+.++++++.+.. .....+++++++.++|+||-
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~G--~~~v~v~~R~~~~a~~la~~~-------------~~~~~~~~~~~~~~aDiVIn 181 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKIV--RPTLTVANRTMSRFNNWSLNI-------------NKINLSHAESHLDEFDIIIN 181 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTTC--CSCCEEECSCGGGGTTCCSCC-------------EEECHHHHHHTGGGCSEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHHCC--CCEEEEEeCCHHHHHHHHHhc-------------ccccHhhHHHHhcCCCEEEE
Confidence 579999999999999999999998 6 8999999987654443210 11123456666789999999
Q ss_pred ccChhhHHHHHHHh-hhcCCCCCeEEEecc
Q 014700 206 AMPVQFSSSFLEGI-SDYVDPGLPFISLSK 234 (420)
Q Consensus 206 aVp~~~l~~vl~~i-~~~l~~~~iVVs~sn 234 (420)
++|.......-..+ ...++++.+|+.+.-
T Consensus 182 aTp~Gm~~~~~~~l~~~~l~~~~~V~D~vY 211 (277)
T 3don_A 182 TTPAGMNGNTDSVISLNRLASHTLVSDIVY 211 (277)
T ss_dssp CCC-------CCSSCCTTCCSSCEEEESCC
T ss_pred CccCCCCCCCcCCCCHHHcCCCCEEEEecC
Confidence 99964222110001 344677888998864
No 237
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=97.72 E-value=0.00016 Score=71.10 Aligned_cols=96 Identities=15% Similarity=0.156 Sum_probs=68.8
Q ss_pred CCeEEEEccc-HHHHHHHHHHHhcCCCCeE-EEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhcc--CCcE
Q 014700 127 TNKVVVLGGG-SFGTAMAAHVANKKSQLKV-YMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GADY 202 (420)
Q Consensus 127 ~mkI~IIGaG-amG~alA~~La~aG~~~~V-~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~--~aDi 202 (420)
++||+|||+| .||...+..|.+.+.+.+| .+++++++.++.+.+... ...+++|.++++. +.|+
T Consensus 18 ~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~~------------~~~~~~~~~~ll~~~~vD~ 85 (340)
T 1zh8_A 18 KIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVG------------NPAVFDSYEELLESGLVDA 85 (340)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHS------------SCEEESCHHHHHHSSCCSE
T ss_pred ceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHhC------------CCcccCCHHHHhcCCCCCE
Confidence 4699999999 8999999999876212566 478999998887766421 0256678998875 5899
Q ss_pred EEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCCc
Q 014700 203 CLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLEL 238 (420)
Q Consensus 203 VIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~ 238 (420)
|++|+|.....+++..... .++.|+ +-|.+..
T Consensus 86 V~i~tp~~~H~~~~~~al~---aGkhVl-~EKPla~ 117 (340)
T 1zh8_A 86 VDLTLPVELNLPFIEKALR---KGVHVI-CEKPIST 117 (340)
T ss_dssp EEECCCGGGHHHHHHHHHH---TTCEEE-EESSSSS
T ss_pred EEEeCCchHHHHHHHHHHH---CCCcEE-EeCCCCC
Confidence 9999998877666655443 355544 3565543
No 238
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=97.72 E-value=2.4e-05 Score=78.49 Aligned_cols=97 Identities=16% Similarity=0.208 Sum_probs=66.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHh-cCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEE
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK-HCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~-g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIl 205 (420)
.++|+|||+|.+|..++..+...| .+|++++|+++..+.+.+. +.... . ...-..++++.++++|+||.
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~G--a~V~~~d~~~~~l~~~~~~~g~~~~------~--~~~~~~~l~~~l~~aDvVi~ 237 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMG--ATVTVLDINIDKLRQLDAEFCGRIH------T--RYSSAYELEGAVKRADLVIG 237 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHTTTSSE------E--EECCHHHHHHHHHHCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CEEEEEeCCHHHHHHHHHhcCCeeE------e--ccCCHHHHHHHHcCCCEEEE
Confidence 579999999999999999999988 7999999999887777653 21100 0 00001245666788999999
Q ss_pred ccChhh--HHHH-HHHhhhcCCCCCeEEEec
Q 014700 206 AMPVQF--SSSF-LEGISDYVDPGLPFISLS 233 (420)
Q Consensus 206 aVp~~~--l~~v-l~~i~~~l~~~~iVVs~s 233 (420)
|++... ...+ .++..+.++++.+||++.
T Consensus 238 ~~~~p~~~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 238 AVLVPGAKAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp CCCCTTSCCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred CCCcCCCCCcceecHHHHhcCCCCcEEEEEe
Confidence 885322 1111 233445567888888876
No 239
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=97.71 E-value=0.00021 Score=73.92 Aligned_cols=86 Identities=10% Similarity=0.053 Sum_probs=64.0
Q ss_pred cCCCeEEEEcc----cHHHHHHHHHHHhc-CCCCeEE-EEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhcc
Q 014700 125 ERTNKVVVLGG----GSFGTAMAAHVANK-KSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL 198 (420)
Q Consensus 125 ~~~mkI~IIGa----GamG~alA~~La~a-G~~~~V~-l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~ 198 (420)
+.++||+|||+ |.||..++..|.+. . +.+|. +++++++.++.+.+... .+ .+.+++|+++++.
T Consensus 37 m~~irvgiIG~g~~GG~~g~~h~~~l~~~~~-~~~lvav~d~~~~~a~~~a~~~g---------~~-~~~~~~d~~ell~ 105 (479)
T 2nvw_A 37 SRPIRVGFVGLTSGKSWVAKTHFLAIQQLSS-QFQIVALYNPTLKSSLQTIEQLQ---------LK-HATGFDSLESFAQ 105 (479)
T ss_dssp GCCEEEEEECCCSTTSHHHHTHHHHHHHTTT-TEEEEEEECSCHHHHHHHHHHTT---------CT-TCEEESCHHHHHH
T ss_pred CCcCEEEEEcccCCCCHHHHHHHHHHHhcCC-CeEEEEEEeCCHHHHHHHHHHcC---------CC-cceeeCCHHHHhc
Confidence 44579999999 99999999999885 2 26765 78999988887776421 01 2356778998875
Q ss_pred --CCcEEEEccChhhHHHHHHHhhh
Q 014700 199 --GADYCLHAMPVQFSSSFLEGISD 221 (420)
Q Consensus 199 --~aDiVIlaVp~~~l~~vl~~i~~ 221 (420)
+.|+|++|+|.....+++.....
T Consensus 106 ~~~vD~V~I~tp~~~H~~~~~~al~ 130 (479)
T 2nvw_A 106 YKDIDMIVVSVKVPEHYEVVKNILE 130 (479)
T ss_dssp CTTCSEEEECSCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEcCCcHHHHHHHHHHHH
Confidence 68999999998776666655433
No 240
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=97.69 E-value=0.00025 Score=72.48 Aligned_cols=102 Identities=12% Similarity=0.091 Sum_probs=67.9
Q ss_pred hcCCCeEEEEcccHHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeC----CHHHhcc
Q 014700 124 LERTNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATT----DAKTALL 198 (420)
Q Consensus 124 ~~~~mkI~IIGaGamG~alA~~La~aG~~~~V~-l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~t----d~~eal~ 198 (420)
++.++||+|||+|.||...+..|.+.. +.+|. ++++++++++.+.+.-.. ..++ ...+.+ |.++++.
T Consensus 17 ~~~~~rvgiIG~G~~g~~h~~~l~~~~-~~~lvav~d~~~~~~~~~a~~~~~------~g~~-~~~~~~~~~~~~~~ll~ 88 (444)
T 2ixa_A 17 NPKKVRIAFIAVGLRGQTHVENMARRD-DVEIVAFADPDPYMVGRAQEILKK------NGKK-PAKVFGNGNDDYKNMLK 88 (444)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHTCT-TEEEEEEECSCHHHHHHHHHHHHH------TTCC-CCEEECSSTTTHHHHTT
T ss_pred CCCCceEEEEecCHHHHHHHHHHHhCC-CcEEEEEEeCCHHHHHHHHHHHHh------cCCC-CCceeccCCCCHHHHhc
Confidence 334579999999999999999988753 26664 789999888776542000 0001 134566 8999876
Q ss_pred --CCcEEEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCC
Q 014700 199 --GADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (420)
Q Consensus 199 --~aDiVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~ 237 (420)
+.|+|++|+|.....+++..... .++.|+ +-|-+.
T Consensus 89 ~~~vD~V~i~tp~~~h~~~~~~al~---aGkhV~-~EKP~a 125 (444)
T 2ixa_A 89 DKNIDAVFVSSPWEWHHEHGVAAMK---AGKIVG-MEVSGA 125 (444)
T ss_dssp CTTCCEEEECCCGGGHHHHHHHHHH---TTCEEE-ECCCCC
T ss_pred CCCCCEEEEcCCcHHHHHHHHHHHH---CCCeEE-EeCCCc
Confidence 58999999998877666655433 455554 345443
No 241
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=97.68 E-value=0.00016 Score=73.33 Aligned_cols=98 Identities=14% Similarity=0.164 Sum_probs=67.2
Q ss_pred CCCeEEEEcccH---HHHHHHHHHHhcCCCCeEE--EEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccC-
Q 014700 126 RTNKVVVLGGGS---FGTAMAAHVANKKSQLKVY--MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLG- 199 (420)
Q Consensus 126 ~~mkI~IIGaGa---mG~alA~~La~aG~~~~V~--l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~- 199 (420)
.++||+|||+|. ||...+..+...+ +.+|. +++++++.++.+.+.... + ...+++|+++++.+
T Consensus 36 ~~~rvgiiG~G~~~~ig~~h~~~~~~~~-~~~lva~v~d~~~~~a~~~a~~~g~---------~-~~~~~~~~~~ll~~~ 104 (417)
T 3v5n_A 36 KRIRLGMVGGGSGAFIGAVHRIAARLDD-HYELVAGALSSTPEKAEASGRELGL---------D-PSRVYSDFKEMAIRE 104 (417)
T ss_dssp CCEEEEEESCC--CHHHHHHHHHHHHTS-CEEEEEEECCSSHHHHHHHHHHHTC---------C-GGGBCSCHHHHHHHH
T ss_pred CcceEEEEcCCCchHHHHHHHHHHhhCC-CcEEEEEEeCCCHHHHHHHHHHcCC---------C-cccccCCHHHHHhcc
Confidence 346999999999 9999888887765 25665 579999988877664211 0 01345688887754
Q ss_pred ------CcEEEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCCc
Q 014700 200 ------ADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLEL 238 (420)
Q Consensus 200 ------aDiVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~ 238 (420)
.|+|++|+|.....+++..... .++.|+ +-|.+..
T Consensus 105 ~~~~~~vD~V~I~tp~~~H~~~~~~al~---aGkhVl-~EKPla~ 145 (417)
T 3v5n_A 105 AKLKNGIEAVAIVTPNHVHYAAAKEFLK---RGIHVI-CDKPLTS 145 (417)
T ss_dssp HHCTTCCSEEEECSCTTSHHHHHHHHHT---TTCEEE-EESSSCS
T ss_pred cccCCCCcEEEECCCcHHHHHHHHHHHh---CCCeEE-EECCCcC
Confidence 8999999998877666655443 455554 4565543
No 242
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=97.66 E-value=8.4e-05 Score=74.81 Aligned_cols=98 Identities=17% Similarity=0.175 Sum_probs=68.8
Q ss_pred CCCeEEEEcccH---HHHHHHHHHHhcCCCCeEE--EEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhcc--
Q 014700 126 RTNKVVVLGGGS---FGTAMAAHVANKKSQLKVY--MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL-- 198 (420)
Q Consensus 126 ~~mkI~IIGaGa---mG~alA~~La~aG~~~~V~--l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~-- 198 (420)
.++||+|||+|. ||...+..+...+ +.+|. +++++++.++.+.+.... + ...+++|+++++.
T Consensus 11 ~~~rvgiiG~G~~~~ig~~h~~~~~~~~-~~~lva~v~d~~~~~a~~~a~~~g~---------~-~~~~~~~~~~ll~~~ 79 (398)
T 3dty_A 11 QPIRWAMVGGGSQSQIGYIHRCAALRDN-TFVLVAGAFDIDPIRGSAFGEQLGV---------D-SERCYADYLSMFEQE 79 (398)
T ss_dssp SCEEEEEEECCTTCSSHHHHHHHHHGGG-SEEEEEEECCSSHHHHHHHHHHTTC---------C-GGGBCSSHHHHHHHH
T ss_pred CcceEEEEcCCccchhHHHHHHHHhhCC-CeEEEEEEeCCCHHHHHHHHHHhCC---------C-cceeeCCHHHHHhcc
Confidence 457999999999 9999998887764 25766 579999988887764211 0 0134568888775
Q ss_pred -----CCcEEEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCCc
Q 014700 199 -----GADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLEL 238 (420)
Q Consensus 199 -----~aDiVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~ 238 (420)
+.|+|++|+|.....+++..... .++.|+ +-|.+..
T Consensus 80 ~~~~~~vD~V~i~tp~~~H~~~~~~al~---aGkhVl-~EKPla~ 120 (398)
T 3dty_A 80 ARRADGIQAVSIATPNGTHYSITKAALE---AGLHVV-CEKPLCF 120 (398)
T ss_dssp TTCTTCCSEEEEESCGGGHHHHHHHHHH---TTCEEE-ECSCSCS
T ss_pred cccCCCCCEEEECCCcHHHHHHHHHHHH---CCCeEE-EeCCCcC
Confidence 38999999999887776665544 355554 4565543
No 243
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=97.66 E-value=0.00011 Score=63.60 Aligned_cols=90 Identities=7% Similarity=0.017 Sum_probs=64.3
Q ss_pred hcCCCeEEEEcc----cHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccC
Q 014700 124 LERTNKVVVLGG----GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLG 199 (420)
Q Consensus 124 ~~~~mkI~IIGa----GamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~ 199 (420)
+....+|+|||+ |.+|..++..|.+.| ++ +|+++++. +.+ .++.+..+++++...
T Consensus 19 l~~p~~iaVVGas~~~g~~G~~~~~~l~~~G--~~--v~~Vnp~~-~~i----------------~G~~~y~sl~~l~~~ 77 (144)
T 2d59_A 19 LTRYKKIALVGASPKPERDANIVMKYLLEHG--YD--VYPVNPKY-EEV----------------LGRKCYPSVLDIPDK 77 (144)
T ss_dssp HHHCCEEEEETCCSCTTSHHHHHHHHHHHTT--CE--EEEECTTC-SEE----------------TTEECBSSGGGCSSC
T ss_pred HcCCCEEEEEccCCCCCchHHHHHHHHHHCC--CE--EEEECCCC-CeE----------------CCeeccCCHHHcCCC
Confidence 333679999999 799999999999988 76 45555531 110 135566678886668
Q ss_pred CcEEEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCC
Q 014700 200 ADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (420)
Q Consensus 200 aDiVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~ 237 (420)
.|++++++|...+.++++++...- ... + .++.|..
T Consensus 78 vDlvvi~vp~~~~~~vv~~~~~~g-i~~-i-~~~~g~~ 112 (144)
T 2d59_A 78 IEVVDLFVKPKLTMEYVEQAIKKG-AKV-V-WFQYNTY 112 (144)
T ss_dssp CSEEEECSCHHHHHHHHHHHHHHT-CSE-E-EECTTCC
T ss_pred CCEEEEEeCHHHHHHHHHHHHHcC-CCE-E-EECCCch
Confidence 999999999999999998876532 222 3 3456665
No 244
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=97.63 E-value=0.00027 Score=70.01 Aligned_cols=92 Identities=11% Similarity=0.160 Sum_probs=63.1
Q ss_pred CCCeEEEEcccHHHHH-HHHHHHhcCCCCeEE-EEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhcc--CCc
Q 014700 126 RTNKVVVLGGGSFGTA-MAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GAD 201 (420)
Q Consensus 126 ~~mkI~IIGaGamG~a-lA~~La~aG~~~~V~-l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~--~aD 201 (420)
.++||+|||+|.||.. .+..|.+.. +.+|. ++++++++ +.+.. ..+.+++|+++++. +.|
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~~-~~~l~av~d~~~~~---~~~~~------------~~~~~~~~~~~ll~~~~vD 67 (358)
T 3gdo_A 4 DTIKVGILGYGLSGSVFHGPLLDVLD-EYQISKIMTSRTEE---VKRDF------------PDAEVVHELEEITNDPAIE 67 (358)
T ss_dssp TCEEEEEECCSHHHHHTTHHHHTTCT-TEEEEEEECSCHHH---HHHHC------------TTSEEESSTHHHHTCTTCC
T ss_pred CcceEEEEccCHHHHHHHHHHHhhCC-CeEEEEEEcCCHHH---HHhhC------------CCCceECCHHHHhcCCCCC
Confidence 4579999999999996 677776542 26765 67888865 22221 02456778999877 689
Q ss_pred EEEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCC
Q 014700 202 YCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (420)
Q Consensus 202 iVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~ 237 (420)
+|++|+|.....+++..... .++.|+ +-|.+.
T Consensus 68 ~V~i~tp~~~H~~~~~~al~---aGkhVl-~EKPla 99 (358)
T 3gdo_A 68 LVIVTTPSGLHYEHTMACIQ---AGKHVV-MEKPMT 99 (358)
T ss_dssp EEEECSCTTTHHHHHHHHHH---TTCEEE-EESSCC
T ss_pred EEEEcCCcHHHHHHHHHHHH---cCCeEE-EecCCc
Confidence 99999998877666655443 455554 356544
No 245
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=97.63 E-value=0.00019 Score=69.76 Aligned_cols=103 Identities=13% Similarity=0.117 Sum_probs=64.6
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhcCCCCeEEEEeC--CHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEE
Q 014700 128 NKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMR--DPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (420)
Q Consensus 128 mkI~IIG-aGamG~alA~~La~aG~~~~V~l~~r--~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVI 204 (420)
|||+|+| +|.+|.+++..|+..+...++.++|+ ++++++.....-.+ ... ...+..+.. ++ .++++++|+||
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~--~~~-~~~~~~v~~-~~-~~a~~~aDvVi 75 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNH--GIA-YDSNTRVRQ-GG-YEDTAGSDVVV 75 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHH--HHT-TTCCCEEEE-CC-GGGGTTCSEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHH--HHh-hCCCcEEEe-CC-HHHhCCCCEEE
Confidence 6999999 99999999999988773237999999 77554321110000 000 011112333 34 56799999999
Q ss_pred EccCh----------------hhHHHHHHHhhhcCCCCCeEEEeccCC
Q 014700 205 HAMPV----------------QFSSSFLEGISDYVDPGLPFISLSKGL 236 (420)
Q Consensus 205 laVp~----------------~~l~~vl~~i~~~l~~~~iVVs~snGi 236 (420)
++... ..++++++.+..+ .++.+|+..+|.+
T Consensus 76 ~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~-~p~~~viv~SNPv 122 (303)
T 1o6z_A 76 ITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEH-NDDYISLTTSNPV 122 (303)
T ss_dssp ECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTT-CSCCEEEECCSSH
T ss_pred EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCcEEEEeCChH
Confidence 98642 1245555666655 4677777777754
No 246
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=97.62 E-value=3.9e-05 Score=66.28 Aligned_cols=89 Identities=16% Similarity=0.173 Sum_probs=64.4
Q ss_pred CCCeEEEEcc----cHHHHHHHHHHHhcCCCCeEEEEeCCHHH-HHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCC
Q 014700 126 RTNKVVVLGG----GSFGTAMAAHVANKKSQLKVYMLMRDPAV-CQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGA 200 (420)
Q Consensus 126 ~~mkI~IIGa----GamG~alA~~La~aG~~~~V~l~~r~~~~-~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~a 200 (420)
...+|+|||+ |.+|..++..|.+.| ++ +|.+++.+ .+.+ .++.+..+++|+-+..
T Consensus 12 ~p~~vaVvGas~~~g~~G~~~~~~l~~~G--~~--v~~vnp~~~~~~i----------------~G~~~~~sl~el~~~v 71 (140)
T 1iuk_A 12 QAKTIAVLGAHKDPSRPAHYVPRYLREQG--YR--VLPVNPRFQGEEL----------------FGEEAVASLLDLKEPV 71 (140)
T ss_dssp HCCEEEEETCCSSTTSHHHHHHHHHHHTT--CE--EEEECGGGTTSEE----------------TTEECBSSGGGCCSCC
T ss_pred CCCEEEEECCCCCCCChHHHHHHHHHHCC--CE--EEEeCCCcccCcC----------------CCEEecCCHHHCCCCC
Confidence 3579999999 899999999999988 76 66666642 1111 1355666788866689
Q ss_pred cEEEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCC
Q 014700 201 DYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (420)
Q Consensus 201 DiVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~ 237 (420)
|++++++|.....++++++...- ...++ ++.|..
T Consensus 72 Dlavi~vp~~~~~~v~~~~~~~g-i~~i~--~~~g~~ 105 (140)
T 1iuk_A 72 DILDVFRPPSALMDHLPEVLALR-PGLVW--LQSGIR 105 (140)
T ss_dssp SEEEECSCHHHHTTTHHHHHHHC-CSCEE--ECTTCC
T ss_pred CEEEEEeCHHHHHHHHHHHHHcC-CCEEE--EcCCcC
Confidence 99999999998888888776532 23343 345665
No 247
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=97.62 E-value=0.00029 Score=71.71 Aligned_cols=113 Identities=11% Similarity=0.193 Sum_probs=72.4
Q ss_pred CCeEEEEcccHHHHHH--HHHHHh--cCC-CCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCc
Q 014700 127 TNKVVVLGGGSFGTAM--AAHVAN--KKS-QLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGAD 201 (420)
Q Consensus 127 ~mkI~IIGaGamG~al--A~~La~--aG~-~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aD 201 (420)
+|||+|||+|.+ .+. ...|+. .+. ..+|.++|.++++++........ +.... ..+..++|..+++++||
T Consensus 2 ~~KI~IIGaG~v-~~~~l~~~l~~~~~~l~~~el~L~Di~~~~~~~~~~~~~~---~~~~~--~~v~~t~d~~~al~~AD 75 (417)
T 1up7_A 2 HMRIAVIGGGSS-YTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKR---LVKDR--FKVLISDTFEGAVVDAK 75 (417)
T ss_dssp CCEEEEETTTCT-THHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHH---HHTTS--SEEEECSSHHHHHTTCS
T ss_pred CCEEEEECCCHH-HHHHHHHHHHhcccCCCcCEEEEEeCCHHHHHHHHHHHHH---HhhCC--eEEEEeCCHHHHhCCCC
Confidence 589999999985 332 223454 332 36899999999876543221100 00001 35667788878899999
Q ss_pred EEEEccCh------------------------------------hhHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHH
Q 014700 202 YCLHAMPV------------------------------------QFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMS 245 (420)
Q Consensus 202 iVIlaVp~------------------------------------~~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~s 245 (420)
+||++.-. ..+.++++.+.++- +.+++..+|.++ .+.
T Consensus 76 ~Viitagvg~~~~~~rd~~i~~k~glvgqeT~G~GGi~~~~rni~i~~~i~~~i~~~~--~A~lin~TNPvd-----i~t 148 (417)
T 1up7_A 76 YVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKTS--NATIVNFTNPSG-----HIT 148 (417)
T ss_dssp EEEECCCTTHHHHHHHHHHGGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHTT--CCEEEECSSSHH-----HHH
T ss_pred EEEEcCCCCCCCccchhhhhhhhcCcccccccccchhHHhhccHHHHHHHHHHHHHHC--CEEEEEeCChHH-----HHH
Confidence 99999721 01456667777764 889999998653 445
Q ss_pred HHHHHHh
Q 014700 246 QIIPQAL 252 (420)
Q Consensus 246 e~l~~~l 252 (420)
+.+.+..
T Consensus 149 ~a~~k~~ 155 (417)
T 1up7_A 149 EFVRNYL 155 (417)
T ss_dssp HHHHHTT
T ss_pred HHHHHhC
Confidence 5665554
No 248
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=97.62 E-value=6.8e-05 Score=74.94 Aligned_cols=98 Identities=19% Similarity=0.248 Sum_probs=64.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEc
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIla 206 (420)
.++|+|+|+|.+|..++..|...| ++|++++|++++.+.+.+.... . +.....-..+++++++++|+||.+
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~G--a~V~~~d~~~~~~~~~~~~~g~-~------~~~~~~~~~~l~~~~~~~DvVi~~ 236 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMG--AQVTILDVNHKRLQYLDDVFGG-R------VITLTATEANIKKSVQHADLLIGA 236 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHTTT-S------EEEEECCHHHHHHHHHHCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CEEEEEECCHHHHHHHHHhcCc-e------EEEecCCHHHHHHHHhCCCEEEEC
Confidence 479999999999999999999988 8999999999887776553210 0 000000012455667889999999
Q ss_pred cChhh--HHH-HHHHhhhcCCCCCeEEEec
Q 014700 207 MPVQF--SSS-FLEGISDYVDPGLPFISLS 233 (420)
Q Consensus 207 Vp~~~--l~~-vl~~i~~~l~~~~iVVs~s 233 (420)
++... ... +.++..+.++++..||++.
T Consensus 237 ~g~~~~~~~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 237 VLVPGAKAPKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp CC-------CCSCHHHHTTSCTTCEEEECC
T ss_pred CCCCccccchhHHHHHHHhhcCCCEEEEEe
Confidence 98542 111 1234445567777777764
No 249
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=97.61 E-value=4e-05 Score=71.14 Aligned_cols=81 Identities=15% Similarity=0.203 Sum_probs=53.4
Q ss_pred CCCeEEEEcccHHHHHHHHH--HHhcCCCCeEE-EEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcE
Q 014700 126 RTNKVVVLGGGSFGTAMAAH--VANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADY 202 (420)
Q Consensus 126 ~~mkI~IIGaGamG~alA~~--La~aG~~~~V~-l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDi 202 (420)
..++|+|||+|.+|.+++.. +...| +++. ++|+++++... ...+. ++...+++++.+++.|+
T Consensus 84 ~~~rV~IIGAG~~G~~La~~~~~~~~g--~~iVg~~D~dp~k~g~---------~i~gv----~V~~~~dl~eli~~~D~ 148 (215)
T 2vt3_A 84 EMTDVILIGVGNLGTAFLHYNFTKNNN--TKISMAFDINESKIGT---------EVGGV----PVYNLDDLEQHVKDESV 148 (215)
T ss_dssp ---CEEEECCSHHHHHHHHCC--------CCEEEEEESCTTTTTC---------EETTE----EEEEGGGHHHHCSSCCE
T ss_pred CCCEEEEEccCHHHHHHHHHHhcccCC--cEEEEEEeCCHHHHHh---------HhcCC----eeechhhHHHHHHhCCE
Confidence 34799999999999999995 33344 6665 67888763221 01111 23446688888766699
Q ss_pred EEEccChhhHHHHHHHhhh
Q 014700 203 CLHAMPVQFSSSFLEGISD 221 (420)
Q Consensus 203 VIlaVp~~~l~~vl~~i~~ 221 (420)
+++|+|+...+++++.+..
T Consensus 149 ViIAvPs~~~~ei~~~l~~ 167 (215)
T 2vt3_A 149 AILTVPAVAAQSITDRLVA 167 (215)
T ss_dssp EEECSCHHHHHHHHHHHHH
T ss_pred EEEecCchhHHHHHHHHHH
Confidence 9999999888888877654
No 250
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=97.61 E-value=5.7e-05 Score=76.51 Aligned_cols=105 Identities=14% Similarity=0.162 Sum_probs=64.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCC---CCce-EE---------eCCH
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKL---PENV-IA---------TTDA 193 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l---~~~i-~a---------~td~ 193 (420)
..+|+|||+|.+|..++..+...| .+|+++|++++..+.+.+.|.....+..... ..+. +. ..++
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~G--a~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l 249 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLG--AIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELF 249 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC--CEEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHHH
Confidence 579999999999999999999888 7999999998877766554321000000000 0000 00 0025
Q ss_pred HHhccCCcEEEEc--cChhhHHHHH-HHhhhcCCCCCeEEEec
Q 014700 194 KTALLGADYCLHA--MPVQFSSSFL-EGISDYVDPGLPFISLS 233 (420)
Q Consensus 194 ~eal~~aDiVIla--Vp~~~l~~vl-~~i~~~l~~~~iVVs~s 233 (420)
++.+.++|+||.+ +|......++ ++....++++.+||.+.
T Consensus 250 ~e~~~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva 292 (401)
T 1x13_A 250 AAQAKEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLA 292 (401)
T ss_dssp HHHHHHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETT
T ss_pred HHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEc
Confidence 5667789999999 5521110111 22334467888998886
No 251
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=97.54 E-value=0.00048 Score=68.33 Aligned_cols=104 Identities=20% Similarity=0.295 Sum_probs=69.8
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCC-----CCeEEEEeCCHHH--HH--HHHHhcCCCCCCCCCCCCCceEEeCCHHHhc
Q 014700 128 NKVVVLGG-GSFGTAMAAHVANKKS-----QLKVYMLMRDPAV--CQ--SINEKHCNCRYFPEQKLPENVIATTDAKTAL 197 (420)
Q Consensus 128 mkI~IIGa-GamG~alA~~La~aG~-----~~~V~l~~r~~~~--~~--~i~~~g~~~~~l~~~~l~~~i~a~td~~eal 197 (420)
.||+|+|| |.+|.+++..|+.... ..++.++|..+.. ++ .+.-.+.. +.+...+...+++.+++
T Consensus 25 vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~------~~~~~~~~~~~~~~~a~ 98 (345)
T 4h7p_A 25 VKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCA------FPLLDKVVVTADPRVAF 98 (345)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTT------CTTEEEEEEESCHHHHT
T ss_pred CEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcC------ccCCCcEEEcCChHHHh
Confidence 49999996 9999999999987641 1279999987632 12 11111211 12233566778888999
Q ss_pred cCCcEEEEcc--Ch--------------hhHHHHHHHhhhcCCCCCeEEEeccCCC
Q 014700 198 LGADYCLHAM--PV--------------QFSSSFLEGISDYVDPGLPFISLSKGLE 237 (420)
Q Consensus 198 ~~aDiVIlaV--p~--------------~~l~~vl~~i~~~l~~~~iVVs~snGi~ 237 (420)
++||+||++- |- ..++++.+.|.++..++.+|+.++|.++
T Consensus 99 ~~advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsNPvd 154 (345)
T 4h7p_A 99 DGVAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGNPAN 154 (345)
T ss_dssp TTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHH
T ss_pred CCCCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCCCcc
Confidence 9999999963 21 1255566667776667888887888543
No 252
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=97.52 E-value=0.00011 Score=71.95 Aligned_cols=84 Identities=12% Similarity=0.150 Sum_probs=57.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeE-EEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEE
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKV-YMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V-~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIl 205 (420)
++||+|||+|+||..++..|.+.+ +.++ .+++++++. +.+ .++..++|+++.+.++|+||+
T Consensus 3 ~irV~IiG~G~mG~~~~~~l~~~~-~~elvav~d~~~~~-----~~~------------~gv~~~~d~~~ll~~~DvVii 64 (320)
T 1f06_A 3 NIRVAIVGYGNLGRSVEKLIAKQP-DMDLVGIFSRRATL-----DTK------------TPVFDVADVDKHADDVDVLFL 64 (320)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTCS-SEEEEEEEESSSCC-----SSS------------SCEEEGGGGGGTTTTCSEEEE
T ss_pred CCEEEEEeecHHHHHHHHHHhcCC-CCEEEEEEcCCHHH-----hhc------------CCCceeCCHHHHhcCCCEEEE
Confidence 579999999999999999998764 2565 477887542 100 135566788777778999999
Q ss_pred ccChhhHHHHHHHhhhcCCCCCeEEE
Q 014700 206 AMPVQFSSSFLEGISDYVDPGLPFIS 231 (420)
Q Consensus 206 aVp~~~l~~vl~~i~~~l~~~~iVVs 231 (420)
|+|+....+.+.. .++.+..+|.
T Consensus 65 atp~~~h~~~~~~---al~aG~~Vv~ 87 (320)
T 1f06_A 65 CMGSATDIPEQAP---KFAQFACTVD 87 (320)
T ss_dssp CSCTTTHHHHHHH---HHTTTSEEEC
T ss_pred cCCcHHHHHHHHH---HHHCCCEEEE
Confidence 9998754333322 2334555554
No 253
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=97.52 E-value=0.0001 Score=70.59 Aligned_cols=95 Identities=16% Similarity=0.272 Sum_probs=61.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhcc-CCcEEEE
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL-GADYCLH 205 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~-~aDiVIl 205 (420)
.++|.|+|+|.||.+++..|++.| .+|++|+|+.++++.+.+.... + . .+.+ .+++++.+ ++|+||.
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~~~G--~~v~v~~R~~~~a~~l~~~~~~--~-~------~~~~-~~~~~~~~~~~DivIn 186 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLLQAQ--QNIVLANRTFSKTKELAERFQP--Y-G------NIQA-VSMDSIPLQTYDLVIN 186 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHHHTT--CEEEEEESSHHHHHHHHHHHGG--G-S------CEEE-EEGGGCCCSCCSEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHHHccc--c-C------CeEE-eeHHHhccCCCCEEEE
Confidence 579999999999999999999998 8999999999888877654110 0 0 1222 23444223 8999999
Q ss_pred ccChhhHHHHHHHh-hhcCCCCCeEEEecc
Q 014700 206 AMPVQFSSSFLEGI-SDYVDPGLPFISLSK 234 (420)
Q Consensus 206 aVp~~~l~~vl~~i-~~~l~~~~iVVs~sn 234 (420)
++|......+. .+ ...++++.+++.+.-
T Consensus 187 ~t~~~~~~~~~-~i~~~~l~~~~~v~D~~y 215 (272)
T 1p77_A 187 ATSAGLSGGTA-SVDAEILKLGSAFYDMQY 215 (272)
T ss_dssp CCCC--------CCCHHHHHHCSCEEESCC
T ss_pred CCCCCCCCCCC-CCCHHHcCCCCEEEEeeC
Confidence 99965432211 11 112334667777653
No 254
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=97.50 E-value=0.00013 Score=67.61 Aligned_cols=93 Identities=11% Similarity=0.066 Sum_probs=61.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCC---HHHh-ccCCcE
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTD---AKTA-LLGADY 202 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td---~~ea-l~~aDi 202 (420)
.++|.|+|+|.+|..++..|.+.| + |++++++++.++.+. .+.... ..+ .++ ++++ +.++|.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g--~-v~vid~~~~~~~~~~-~~~~~i-~gd---------~~~~~~l~~a~i~~ad~ 74 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSE--V-FVLAEDENVRKKVLR-SGANFV-HGD---------PTRVSDLEKANVRGARA 74 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSE--E-EEEESCGGGHHHHHH-TTCEEE-ESC---------TTCHHHHHHTTCTTCSE
T ss_pred CCEEEEECCChHHHHHHHHHHhCC--e-EEEEECCHHHHHHHh-cCCeEE-EcC---------CCCHHHHHhcCcchhcE
Confidence 568999999999999999999988 8 999999998877766 332110 000 012 2233 678999
Q ss_pred EEEccChhhHHHHHHHhhhcCCCCCeEEEec
Q 014700 203 CLHAMPVQFSSSFLEGISDYVDPGLPFISLS 233 (420)
Q Consensus 203 VIlaVp~~~l~~vl~~i~~~l~~~~iVVs~s 233 (420)
||++++.+...-.+......+.++..+|.-.
T Consensus 75 vi~~~~~d~~n~~~~~~a~~~~~~~~iia~~ 105 (234)
T 2aef_A 75 VIVDLESDSETIHCILGIRKIDESVRIIAEA 105 (234)
T ss_dssp EEECCSCHHHHHHHHHHHHHHCSSSEEEEEC
T ss_pred EEEcCCCcHHHHHHHHHHHHHCCCCeEEEEE
Confidence 9999997654433333344445553444433
No 255
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=97.50 E-value=0.00042 Score=68.51 Aligned_cols=95 Identities=15% Similarity=0.081 Sum_probs=66.7
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCC------CCeEE-EEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhcc--
Q 014700 128 NKVVVLGGGSFGTAMAAHVANKKS------QLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL-- 198 (420)
Q Consensus 128 mkI~IIGaGamG~alA~~La~aG~------~~~V~-l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~-- 198 (420)
.||||||+|.||...+..|..... +.+|. +++++++.++.+.+.... ..+.+|.++++.
T Consensus 7 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~~~g~------------~~~~~d~~~ll~~~ 74 (390)
T 4h3v_A 7 LGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAGKLGW------------STTETDWRTLLERD 74 (390)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHHHHTC------------SEEESCHHHHTTCT
T ss_pred CcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHHHHHcCC------------CcccCCHHHHhcCC
Confidence 489999999999988887765320 12444 779999988887765311 146679999875
Q ss_pred CCcEEEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCCc
Q 014700 199 GADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLEL 238 (420)
Q Consensus 199 ~aDiVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~ 238 (420)
+.|+|++|+|.....+++..... .++-|+ +-|.+..
T Consensus 75 ~iDaV~I~tP~~~H~~~~~~al~---aGkhVl-~EKPla~ 110 (390)
T 4h3v_A 75 DVQLVDVCTPGDSHAEIAIAALE---AGKHVL-CEKPLAN 110 (390)
T ss_dssp TCSEEEECSCGGGHHHHHHHHHH---TTCEEE-EESSSCS
T ss_pred CCCEEEEeCChHHHHHHHHHHHH---cCCCce-eecCccc
Confidence 47999999998887766655443 355443 5676654
No 256
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=97.50 E-value=0.00023 Score=71.32 Aligned_cols=95 Identities=13% Similarity=0.190 Sum_probs=64.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEE
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~-l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIl 205 (420)
..||+|||+| ||...+..+.+...+.++. +++|+.++.+++.+.. ++...+|.++.+.+.|++++
T Consensus 7 ~~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~~~~~~a~~~a~~~-------------gv~~~~~~~~l~~~~D~v~i 72 (372)
T 4gmf_A 7 KQRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLAQGSARSRELAHAF-------------GIPLYTSPEQITGMPDIACI 72 (372)
T ss_dssp CEEEEEECST-TTHHHHHTTSSCCTTEEEEEEECCSSHHHHHHHHHT-------------TCCEESSGGGCCSCCSEEEE
T ss_pred CCEEEEEehH-HHHHHHHHHHhCCCCeEEEEEECCCHHHHHHHHHHh-------------CCCEECCHHHHhcCCCEEEE
Confidence 4699999999 8998888877652125666 6789999888887752 23456789998899999999
Q ss_pred ccChhhH----HHHHHHhhhcCCCCCeEEEeccCCCcc
Q 014700 206 AMPVQFS----SSFLEGISDYVDPGLPFISLSKGLELN 239 (420)
Q Consensus 206 aVp~~~l----~~vl~~i~~~l~~~~iVVs~snGi~~~ 239 (420)
++|+... .++..... +.|+-|+ +-|-+..+
T Consensus 73 ~~p~~~h~~~~~~~a~~al---~aGkhVl-~EKPl~~~ 106 (372)
T 4gmf_A 73 VVRSTVAGGAGTQLARHFL---ARGVHVI-QEHPLHPD 106 (372)
T ss_dssp CCC--CTTSHHHHHHHHHH---HTTCEEE-EESCCCHH
T ss_pred ECCCcccchhHHHHHHHHH---HcCCcEE-EecCCCHH
Confidence 9997543 34443332 2355444 34555443
No 257
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=97.49 E-value=0.0002 Score=72.44 Aligned_cols=71 Identities=15% Similarity=0.265 Sum_probs=54.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHHh-cCCCCCCCCCCCCCceEEeCCHHHhccCCcEE
Q 014700 126 RTNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEK-HCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (420)
Q Consensus 126 ~~mkI~IIGaGamG~alA~~La~aG~~~-~V~l~~r~~~~~~~i~~~-g~~~~~l~~~~l~~~i~a~td~~eal~~aDiV 203 (420)
..++|+|||+|.||..++..|...| . +|++++|++++.+.+.+. |.. .....++.+.+.++|+|
T Consensus 166 ~g~~VlIiGaG~iG~~~a~~l~~~G--~~~V~v~~r~~~ra~~la~~~g~~------------~~~~~~l~~~l~~aDvV 231 (404)
T 1gpj_A 166 HDKTVLVVGAGEMGKTVAKSLVDRG--VRAVLVANRTYERAVELARDLGGE------------AVRFDELVDHLARSDVV 231 (404)
T ss_dssp TTCEEEEESCCHHHHHHHHHHHHHC--CSEEEEECSSHHHHHHHHHHHTCE------------ECCGGGHHHHHHTCSEE
T ss_pred cCCEEEEEChHHHHHHHHHHHHHCC--CCEEEEEeCCHHHHHHHHHHcCCc------------eecHHhHHHHhcCCCEE
Confidence 4679999999999999999999988 6 899999999877555442 211 00113566777899999
Q ss_pred EEccChh
Q 014700 204 LHAMPVQ 210 (420)
Q Consensus 204 IlaVp~~ 210 (420)
|.|++..
T Consensus 232 i~at~~~ 238 (404)
T 1gpj_A 232 VSATAAP 238 (404)
T ss_dssp EECCSSS
T ss_pred EEccCCC
Confidence 9999854
No 258
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=97.48 E-value=0.00024 Score=67.85 Aligned_cols=95 Identities=13% Similarity=0.176 Sum_probs=64.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhc-cCCcEEEE
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL-LGADYCLH 205 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal-~~aDiVIl 205 (420)
.++|.|+|+|.+|.+++..|++.| .+|++++|+.++++.+.+.-.. + . .+.+ .+.++.. .++|+||.
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G--~~V~v~~R~~~~~~~la~~~~~--~-~------~~~~-~~~~~~~~~~~DivVn 186 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLD--CAVTITNRTVSRAEELAKLFAH--T-G------SIQA-LSMDELEGHEFDLIIN 186 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSHHHHHHHHHHTGG--G-S------SEEE-CCSGGGTTCCCSEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHHcC--CEEEEEECCHHHHHHHHHHhhc--c-C------CeeE-ecHHHhccCCCCEEEE
Confidence 579999999999999999999998 8999999999888777653100 0 0 1222 2333322 48999999
Q ss_pred ccChhhHHHHHHHh-hhcCCCCCeEEEecc
Q 014700 206 AMPVQFSSSFLEGI-SDYVDPGLPFISLSK 234 (420)
Q Consensus 206 aVp~~~l~~vl~~i-~~~l~~~~iVVs~sn 234 (420)
+++.....++ ..+ ...++++.+++.+.-
T Consensus 187 ~t~~~~~~~~-~~i~~~~l~~~~~v~D~~y 215 (271)
T 1nyt_A 187 ATSSGISGDI-PAIPSSLIHPGIYCYDMFY 215 (271)
T ss_dssp CCSCGGGTCC-CCCCGGGCCTTCEEEESCC
T ss_pred CCCCCCCCCC-CCCCHHHcCCCCEEEEecc
Confidence 9995432111 012 123566777877653
No 259
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=97.47 E-value=0.00012 Score=70.68 Aligned_cols=97 Identities=9% Similarity=0.120 Sum_probs=65.0
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEE
Q 014700 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (420)
Q Consensus 126 ~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIl 205 (420)
..++|.|+|+|.+|.+++..|++.|. .+|++++|+.++++++.+..... ..+.+. ++++...++|+||-
T Consensus 125 ~~k~vlvlGaGg~g~aia~~L~~~G~-~~v~v~~R~~~~a~~la~~~~~~---------~~~~~~-~~~~l~~~aDiIIn 193 (281)
T 3o8q_A 125 KGATILLIGAGGAARGVLKPLLDQQP-ASITVTNRTFAKAEQLAELVAAY---------GEVKAQ-AFEQLKQSYDVIIN 193 (281)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTCC-SEEEEEESSHHHHHHHHHHHGGG---------SCEEEE-EGGGCCSCEEEEEE
T ss_pred cCCEEEEECchHHHHHHHHHHHhcCC-CeEEEEECCHHHHHHHHHHhhcc---------CCeeEe-eHHHhcCCCCEEEE
Confidence 35799999999999999999999882 39999999999888776642110 012222 34444478999999
Q ss_pred ccChhhHHHHHHHh-hhcCCCCCeEEEecc
Q 014700 206 AMPVQFSSSFLEGI-SDYVDPGLPFISLSK 234 (420)
Q Consensus 206 aVp~~~l~~vl~~i-~~~l~~~~iVVs~sn 234 (420)
|+|.....+.. .+ ...++++.+|+.+.-
T Consensus 194 aTp~gm~~~~~-~l~~~~l~~~~~V~DlvY 222 (281)
T 3o8q_A 194 STSASLDGELP-AIDPVIFSSRSVCYDMMY 222 (281)
T ss_dssp CSCCCC----C-SCCGGGEEEEEEEEESCC
T ss_pred cCcCCCCCCCC-CCCHHHhCcCCEEEEecC
Confidence 99965322110 11 234556777888763
No 260
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=97.47 E-value=0.00016 Score=72.64 Aligned_cols=106 Identities=16% Similarity=0.165 Sum_probs=65.2
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCC-C-C---------C--CCCCce--EEe
Q 014700 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYF-P-E---------Q--KLPENV--IAT 190 (420)
Q Consensus 126 ~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l-~-~---------~--~l~~~i--~a~ 190 (420)
...+|+|||+|.+|...+..+...| .+|+++++++++.+.+.+.|.....+ . + + .+.... ...
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~G--a~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~ 248 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLG--AVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQA 248 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhH
Confidence 3679999999999999999999888 78999999987666665543211000 0 0 0 000000 000
Q ss_pred CCHHHhccCCcEEEEcc--ChhhHHHH-HHHhhhcCCCCCeEEEec
Q 014700 191 TDAKTALLGADYCLHAM--PVQFSSSF-LEGISDYVDPGLPFISLS 233 (420)
Q Consensus 191 td~~eal~~aDiVIlaV--p~~~l~~v-l~~i~~~l~~~~iVVs~s 233 (420)
..+++.++++|+||.++ |......+ .++....++++.+||.+.
T Consensus 249 ~~l~~~~~~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva 294 (384)
T 1l7d_A 249 EAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLA 294 (384)
T ss_dssp HHHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETT
T ss_pred HHHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEe
Confidence 11566778999999998 42111111 133344567888888876
No 261
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=97.46 E-value=0.00029 Score=67.63 Aligned_cols=149 Identities=12% Similarity=0.105 Sum_probs=85.8
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEE
Q 014700 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (420)
Q Consensus 127 ~mkI~IIGa-GamG~alA~~La~aG~~~~V~-l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVI 204 (420)
.|||+|+|+ |.||..++..+.+.. +++|. +++++++... +.....+-+. .+.++.+++|+++++.++|+||
T Consensus 5 ~mkV~V~Ga~G~mG~~~~~~~~~~~-~~elva~~d~~~~~~~-----g~d~~~~~g~-~~~~v~~~~dl~~~l~~~DvVI 77 (273)
T 1dih_A 5 NIRVAIAGAGGRMGRQLIQAALALE-GVQLGAALEREGSSLL-----GSDAGELAGA-GKTGVTVQSSLDAVKDDFDVFI 77 (273)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHST-TEECCCEECCTTCTTC-----SCCTTCSSSS-SCCSCCEESCSTTTTTSCSEEE
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCC-CCEEEEEEecCchhhh-----hhhHHHHcCC-CcCCceecCCHHHHhcCCCEEE
Confidence 479999998 999999999887543 37777 6676643210 1110000010 0123455678888788899999
Q ss_pred EccChhhHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCeEEEECcccHHHHhhcCCeEEEEecC
Q 014700 205 HAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALELMNKLPTAMVVASK 284 (420)
Q Consensus 205 laVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~~vl~GP~~a~ev~~g~~t~i~ia~~ 284 (420)
-++++....+.+..... .+..+|..+.|+..+. .+.+.+.-. ...++..|++...+..
T Consensus 78 Dft~p~~~~~~~~~a~~---~G~~vVigTtG~~~e~----~~~L~~~a~----~~~vv~a~N~siGvn~----------- 135 (273)
T 1dih_A 78 DFTRPEGTLNHLAFCRQ---HGKGMVIGTTGFDEAG----KQAIRDAAA----DIAIVFAANFSVGVNV----------- 135 (273)
T ss_dssp ECSCHHHHHHHHHHHHH---TTCEEEECCCCCCHHH----HHHHHHHTT----TSCEEECSCCCHHHHH-----------
T ss_pred EcCChHHHHHHHHHHHh---CCCCEEEECCCCCHHH----HHHHHHhcC----CCCEEEEecCcHHHHH-----------
Confidence 66665555555554443 4556666566876542 233333321 2346778877654211
Q ss_pred CHHHHHHHHHHHhcCCceEEE
Q 014700 285 DRKLANAVQQLLASKHLRIST 305 (420)
Q Consensus 285 d~e~~~~l~~ll~~~g~~v~~ 305 (420)
--+.++.+.+.|. .++.+.+
T Consensus 136 ~~~l~~~aa~~~~-~~~diei 155 (273)
T 1dih_A 136 MLKLLEKAAKVMG-DYTDIEI 155 (273)
T ss_dssp HHHHHHHHHHHHT-TTSEEEE
T ss_pred HHHHHHHHHHhcC-CCCCEEE
Confidence 1245667777775 2455443
No 262
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=97.46 E-value=0.00046 Score=68.08 Aligned_cols=94 Identities=17% Similarity=0.114 Sum_probs=61.8
Q ss_pred CCeEEEEcccHHHH-HHHHHHHhcCCCCeEE-EEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccC--CcE
Q 014700 127 TNKVVVLGGGSFGT-AMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLG--ADY 202 (420)
Q Consensus 127 ~mkI~IIGaGamG~-alA~~La~aG~~~~V~-l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~--aDi 202 (420)
++||+|||+|.||. ..+..|.+.. +.+|. +++++ ..+.+.+.... .++.+++|+++++.+ .|+
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~l~~~~-~~~l~av~d~~--~~~~~a~~~~~----------~~~~~~~~~~~ll~~~~~D~ 68 (349)
T 3i23_A 2 TVKMGFIGFGKSANRYHLPYVMIRE-TLEVKTIFDLH--VNEKAAAPFKE----------KGVNFTADLNELLTDPEIEL 68 (349)
T ss_dssp CEEEEEECCSHHHHHTTHHHHTTCT-TEEEEEEECTT--CCHHHHHHHHT----------TTCEEESCTHHHHSCTTCCE
T ss_pred eeEEEEEccCHHHHHHHHHHHhhCC-CeEEEEEECCC--HHHHHHHhhCC----------CCCeEECCHHHHhcCCCCCE
Confidence 46999999999998 5666665542 26775 67777 23344332100 134667889998775 899
Q ss_pred EEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCC
Q 014700 203 CLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (420)
Q Consensus 203 VIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~ 237 (420)
|++|+|.....+++..... .++.|+ +-|.+.
T Consensus 69 V~i~tp~~~h~~~~~~al~---aGk~Vl-~EKP~a 99 (349)
T 3i23_A 69 ITICTPAHTHYDLAKQAIL---AGKSVI-VEKPFC 99 (349)
T ss_dssp EEECSCGGGHHHHHHHHHH---TTCEEE-ECSCSC
T ss_pred EEEeCCcHHHHHHHHHHHH---cCCEEE-EECCCc
Confidence 9999998877666655443 455554 356554
No 263
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=97.46 E-value=0.00078 Score=65.08 Aligned_cols=105 Identities=14% Similarity=0.093 Sum_probs=72.2
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhcc--CCcE
Q 014700 126 RTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GADY 202 (420)
Q Consensus 126 ~~mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~--~aDi 202 (420)
..+||+|+|+ |.||..++..|.+.| +++ ++..++... +. . ..++.+..+++++.+ ++|+
T Consensus 6 ~~~~VaVvGasG~~G~~~~~~l~~~g--~~~-v~~VnP~~~------g~--~-------i~G~~vy~sl~el~~~~~~Dv 67 (288)
T 1oi7_A 6 RETRVLVQGITGREGQFHTKQMLTYG--TKI-VAGVTPGKG------GM--E-------VLGVPVYDTVKEAVAHHEVDA 67 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHT--CEE-EEEECTTCT------TC--E-------ETTEEEESSHHHHHHHSCCSE
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHcC--CeE-EEEECCCCC------Cc--e-------ECCEEeeCCHHHHhhcCCCCE
Confidence 3579999998 999999999999887 774 344443210 00 0 124677788888877 8999
Q ss_pred EEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHH
Q 014700 203 CLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQ 250 (420)
Q Consensus 203 VIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~ 250 (420)
+++++|.....+++++.... . -..+|.++.|+..+..+.+.+..++
T Consensus 68 ~Ii~vp~~~~~~~~~ea~~~-G-i~~vVi~t~G~~~~~~~~l~~~a~~ 113 (288)
T 1oi7_A 68 SIIFVPAPAAADAALEAAHA-G-IPLIVLITEGIPTLDMVRAVEEIKA 113 (288)
T ss_dssp EEECCCHHHHHHHHHHHHHT-T-CSEEEECCSCCCHHHHHHHHHHHHH
T ss_pred EEEecCHHHHHHHHHHHHHC-C-CCEEEEECCCCCHHHHHHHHHHHHH
Confidence 99999999998888887653 1 1235667788875433344444433
No 264
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=97.44 E-value=0.00051 Score=67.94 Aligned_cols=94 Identities=15% Similarity=0.159 Sum_probs=63.1
Q ss_pred eEEEEcccHHHHHHHHHHHhcC------CCCeEE-EEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhcc--C
Q 014700 129 KVVVLGGGSFGTAMAAHVANKK------SQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--G 199 (420)
Q Consensus 129 kI~IIGaGamG~alA~~La~aG------~~~~V~-l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~--~ 199 (420)
||||||+|.||..-+..+.... .+.+|. ++|++++.++++.+.... .++++|.++++. +
T Consensus 27 rvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~------------~~~y~d~~ell~~~~ 94 (393)
T 4fb5_A 27 GIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGF------------EKATADWRALIADPE 94 (393)
T ss_dssp EEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTC------------SEEESCHHHHHHCTT
T ss_pred cEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCC------------CeecCCHHHHhcCCC
Confidence 7999999999997776654321 014555 778999888887765211 146779998875 5
Q ss_pred CcEEEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCCc
Q 014700 200 ADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLEL 238 (420)
Q Consensus 200 aDiVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~ 238 (420)
.|+|++|+|.....+++..... .++-|+ +-|.+..
T Consensus 95 iDaV~IatP~~~H~~~a~~al~---aGkhVl-~EKPla~ 129 (393)
T 4fb5_A 95 VDVVSVTTPNQFHAEMAIAALE---AGKHVW-CEKPMAP 129 (393)
T ss_dssp CCEEEECSCGGGHHHHHHHHHH---TTCEEE-ECSCSCS
T ss_pred CcEEEECCChHHHHHHHHHHHh---cCCeEE-EccCCcc
Confidence 7999999998887766655544 355444 5676654
No 265
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=97.43 E-value=0.00036 Score=69.54 Aligned_cols=95 Identities=15% Similarity=0.199 Sum_probs=65.6
Q ss_pred CCeEEEEc-ccHHHHH-HH----HHHHhcCCCCeE----------EEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEe
Q 014700 127 TNKVVVLG-GGSFGTA-MA----AHVANKKSQLKV----------YMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIAT 190 (420)
Q Consensus 127 ~mkI~IIG-aGamG~a-lA----~~La~aG~~~~V----------~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~ 190 (420)
.+||+||| +|.||.. .+ ..+.+.+ +..+ .+++++++.++.+.+.... + .++
T Consensus 6 ~irigiiG~~G~~g~~~h~~~~~~~~~~~~-~~~l~~~~~~~~~~av~~~~~~~a~~~a~~~~~---------~---~~~ 72 (383)
T 3oqb_A 6 RLGLIMNGVTGRMGLNQHLIRSIVAIRDQG-GVRLKNGDRIMPDPILVGRSAEKVEALAKRFNI---------A---RWT 72 (383)
T ss_dssp EEEEEEESTTSTHHHHTTTTTTHHHHHHHT-SEECTTSCEEEEEEEEECSSSHHHHHHHHHTTC---------C---CEE
T ss_pred eeEEEEEeccchhhhhhhHHHHHHHHhhcC-ceeecCCcccceeeEEEcCCHHHHHHHHHHhCC---------C---ccc
Confidence 46999999 9999998 66 6666654 1222 3899999988888764210 0 356
Q ss_pred CCHHHhccC--CcEEEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCCc
Q 014700 191 TDAKTALLG--ADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLEL 238 (420)
Q Consensus 191 td~~eal~~--aDiVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~ 238 (420)
+|+++++.+ .|+|++|+|.....+++.... +.++.|+ +-|.+..
T Consensus 73 ~~~~~ll~~~~iD~V~i~tp~~~h~~~~~~al---~~Gk~V~-~EKP~a~ 118 (383)
T 3oqb_A 73 TDLDAALADKNDTMFFDAATTQARPGLLTQAI---NAGKHVY-CEKPIAT 118 (383)
T ss_dssp SCHHHHHHCSSCCEEEECSCSSSSHHHHHHHH---TTTCEEE-ECSCSCS
T ss_pred CCHHHHhcCCCCCEEEECCCchHHHHHHHHHH---HCCCeEE-EcCCCCC
Confidence 789988754 899999999876666554443 3456655 5675543
No 266
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=97.42 E-value=0.00033 Score=70.18 Aligned_cols=111 Identities=11% Similarity=0.125 Sum_probs=67.4
Q ss_pred chhhcCCCeEEEEc-ccHHHHHHHHHHHhcCCC---CeEEEEeCCHH----HHH--HHHHhcCCCCCCCCCCCCCceEEe
Q 014700 121 TDILERTNKVVVLG-GGSFGTAMAAHVANKKSQ---LKVYMLMRDPA----VCQ--SINEKHCNCRYFPEQKLPENVIAT 190 (420)
Q Consensus 121 ~~~~~~~mkI~IIG-aGamG~alA~~La~aG~~---~~V~l~~r~~~----~~~--~i~~~g~~~~~l~~~~l~~~i~a~ 190 (420)
.+.|...+||+|+| +|.+|.+++..|+..+.- ..|.+.+.+.+ .++ .+--.+.. ..+..++.+.
T Consensus 26 ~~~~~~~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~------~p~~~~v~i~ 99 (375)
T 7mdh_A 26 TKSWKKLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSL------YPLLREVSIG 99 (375)
T ss_dssp ---CCCCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTT------CTTEEEEEEE
T ss_pred HhhCCCCCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhh------hhhcCCcEEe
Confidence 34566678999999 799999999999987631 12666544322 121 11111211 1122345666
Q ss_pred CCHHHhccCCcEEEEcc--Ch--------------hhHHHHHHHhhhcCCCCCeEEEeccCCC
Q 014700 191 TDAKTALLGADYCLHAM--PV--------------QFSSSFLEGISDYVDPGLPFISLSKGLE 237 (420)
Q Consensus 191 td~~eal~~aDiVIlaV--p~--------------~~l~~vl~~i~~~l~~~~iVVs~snGi~ 237 (420)
++..+++++||+||++- |- ..++++.+.|.++..++.+|+.++|-++
T Consensus 100 ~~~y~~~~daDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsNPvD 162 (375)
T 7mdh_A 100 IDPYEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGNPCN 162 (375)
T ss_dssp SCHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHH
T ss_pred cCCHHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCchh
Confidence 77777899999999963 21 1244455556665567888888888543
No 267
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=97.38 E-value=0.0005 Score=64.87 Aligned_cols=68 Identities=15% Similarity=0.177 Sum_probs=51.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEc
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIla 206 (420)
+|||.|.|+|.+|..++..|.+.| ++|++++|+++..+.+...+..... .+ .+|++ +.++|+||.+
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~-~D---------~~d~~--~~~~d~vi~~ 70 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQG--WRIIGTSRNPDQMEAIRASGAEPLL-WP---------GEEPS--LDGVTHLLIS 70 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGT--CEEEEEESCGGGHHHHHHTTEEEEE-SS---------SSCCC--CTTCCEEEEC
T ss_pred cCcEEEECCcHHHHHHHHHHHHCC--CEEEEEEcChhhhhhHhhCCCeEEE-ec---------ccccc--cCCCCEEEEC
Confidence 689999999999999999999998 9999999998877766654321100 00 01222 6789999998
Q ss_pred cC
Q 014700 207 MP 208 (420)
Q Consensus 207 Vp 208 (420)
..
T Consensus 71 a~ 72 (286)
T 3ius_A 71 TA 72 (286)
T ss_dssp CC
T ss_pred CC
Confidence 75
No 268
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=97.37 E-value=0.0019 Score=62.63 Aligned_cols=106 Identities=13% Similarity=0.103 Sum_probs=73.2
Q ss_pred cCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhcc--CCc
Q 014700 125 ERTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GAD 201 (420)
Q Consensus 125 ~~~mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~--~aD 201 (420)
....+|+|+|+ |.||..++..|.+.| ++ .++..++... +. . + .++.+..+++++.+ ++|
T Consensus 11 ~~~~~v~V~Gasg~~G~~~~~~l~~~g--~~-~V~~VnP~~~------g~--~------i-~G~~vy~sl~el~~~~~~D 72 (294)
T 2yv1_A 11 DENTKAIVQGITGRQGSFHTKKMLECG--TK-IVGGVTPGKG------GQ--N------V-HGVPVFDTVKEAVKETDAN 72 (294)
T ss_dssp CTTCCEEEETTTSHHHHHHHHHHHHTT--CC-EEEEECTTCT------TC--E------E-TTEEEESSHHHHHHHHCCC
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHhCC--Ce-EEEEeCCCCC------Cc--e------E-CCEeeeCCHHHHhhcCCCC
Confidence 34568999998 999999999999887 67 4555554310 00 0 0 14677788988877 899
Q ss_pred EEEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHH
Q 014700 202 YCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQ 250 (420)
Q Consensus 202 iVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~ 250 (420)
++++++|.....+++++.... . -..+|.++.|+..+..+.+.+..++
T Consensus 73 v~ii~vp~~~~~~~v~ea~~~-G-i~~vVi~t~G~~~~~~~~l~~~A~~ 119 (294)
T 2yv1_A 73 ASVIFVPAPFAKDAVFEAIDA-G-IELIVVITEHIPVHDTMEFVNYAED 119 (294)
T ss_dssp EEEECCCHHHHHHHHHHHHHT-T-CSEEEECCSCCCHHHHHHHHHHHHH
T ss_pred EEEEccCHHHHHHHHHHHHHC-C-CCEEEEECCCCCHHHHHHHHHHHHH
Confidence 999999999998888887653 1 1235667888875433344444443
No 269
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=97.35 E-value=0.00051 Score=70.09 Aligned_cols=84 Identities=12% Similarity=0.025 Sum_probs=62.7
Q ss_pred CCCeEEEEcc----cHHHHHHHHHHHhc-CCCCeE-EEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhcc-
Q 014700 126 RTNKVVVLGG----GSFGTAMAAHVANK-KSQLKV-YMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL- 198 (420)
Q Consensus 126 ~~mkI~IIGa----GamG~alA~~La~a-G~~~~V-~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~- 198 (420)
.++||+|||+ |.||..++..|.+. . +.+| .+++++++.++.+.+... .+ .+.+.+|+++++.
T Consensus 19 ~~irvgiIG~g~~gG~~g~~~~~~l~~~~~-~~~lvav~d~~~~~~~~~a~~~g---------~~-~~~~~~~~~~ll~~ 87 (438)
T 3btv_A 19 APIRVGFVGLNAAKGWAIKTHYPAILQLSS-QFQITALYSPKIETSIATIQRLK---------LS-NATAFPTLESFASS 87 (438)
T ss_dssp CCEEEEEESCCTTSSSTTTTHHHHHHHTTT-TEEEEEEECSSHHHHHHHHHHTT---------CT-TCEEESSHHHHHHC
T ss_pred CCCEEEEEcccCCCChHHHHHHHHHHhcCC-CeEEEEEEeCCHHHHHHHHHHcC---------CC-cceeeCCHHHHhcC
Confidence 3579999999 99999999999886 3 2676 478999988877766421 01 2356778998875
Q ss_pred -CCcEEEEccChhhHHHHHHHhh
Q 014700 199 -GADYCLHAMPVQFSSSFLEGIS 220 (420)
Q Consensus 199 -~aDiVIlaVp~~~l~~vl~~i~ 220 (420)
+.|+|++|+|.....+++....
T Consensus 88 ~~vD~V~i~tp~~~H~~~~~~al 110 (438)
T 3btv_A 88 STIDMIVIAIQVASHYEVVMPLL 110 (438)
T ss_dssp SSCSEEEECSCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCcHHHHHHHHHHH
Confidence 6899999999877666655443
No 270
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=97.35 E-value=0.00065 Score=67.29 Aligned_cols=92 Identities=14% Similarity=0.192 Sum_probs=62.5
Q ss_pred CCCeEEEEcccHHHHH-HHHHHHhcCCCCeEE-EEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccC--Cc
Q 014700 126 RTNKVVVLGGGSFGTA-MAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLG--AD 201 (420)
Q Consensus 126 ~~mkI~IIGaGamG~a-lA~~La~aG~~~~V~-l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~--aD 201 (420)
+++||+|||+|.||.. .+..|.+.. +.+|. +++++++. +.+. + ..+.+++|+++++.+ .|
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~~-~~~l~av~d~~~~~---~~~~-----~-------~~~~~~~~~~~ll~~~~vD 67 (362)
T 3fhl_A 4 EIIKTGLAAFGMSGQVFHAPFISTNP-HFELYKIVERSKEL---SKER-----Y-------PQASIVRSFKELTEDPEID 67 (362)
T ss_dssp CCEEEEESCCSHHHHHTTHHHHHHCT-TEEEEEEECSSCCG---GGTT-----C-------TTSEEESCSHHHHTCTTCC
T ss_pred CceEEEEECCCHHHHHHHHHHHhhCC-CeEEEEEEcCCHHH---HHHh-----C-------CCCceECCHHHHhcCCCCC
Confidence 4579999999999997 677776652 26765 67888653 1111 0 134667889998875 89
Q ss_pred EEEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCC
Q 014700 202 YCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (420)
Q Consensus 202 iVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~ 237 (420)
+|++|+|.....+++..... .++-|+ +-|.+.
T Consensus 68 ~V~i~tp~~~H~~~~~~al~---aGkhVl-~EKP~a 99 (362)
T 3fhl_A 68 LIVVNTPDNTHYEYAGMALE---AGKNVV-VEKPFT 99 (362)
T ss_dssp EEEECSCGGGHHHHHHHHHH---TTCEEE-EESSCC
T ss_pred EEEEeCChHHHHHHHHHHHH---CCCeEE-EecCCC
Confidence 99999998877666655443 355544 455554
No 271
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=97.34 E-value=0.0003 Score=67.52 Aligned_cols=95 Identities=12% Similarity=0.131 Sum_probs=64.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhc-cCCcEEEE
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL-LGADYCLH 205 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal-~~aDiVIl 205 (420)
.+++.|+|+|.+|.+++..|++.|. .+|++++|+.++++++.+.... ..+.+. +.++.. .++|+||-
T Consensus 120 ~k~~lvlGaGg~~~aia~~L~~~G~-~~v~i~~R~~~~a~~la~~~~~----------~~~~~~-~~~~l~~~~~DivIn 187 (272)
T 3pwz_A 120 NRRVLLLGAGGAVRGALLPFLQAGP-SELVIANRDMAKALALRNELDH----------SRLRIS-RYEALEGQSFDIVVN 187 (272)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTCC-SEEEEECSCHHHHHHHHHHHCC----------TTEEEE-CSGGGTTCCCSEEEE
T ss_pred CCEEEEECccHHHHHHHHHHHHcCC-CEEEEEeCCHHHHHHHHHHhcc----------CCeeEe-eHHHhcccCCCEEEE
Confidence 5799999999999999999999882 3999999999998888764211 012222 222321 68999999
Q ss_pred ccChhhHHHHHHHh-hhcCCCCCeEEEecc
Q 014700 206 AMPVQFSSSFLEGI-SDYVDPGLPFISLSK 234 (420)
Q Consensus 206 aVp~~~l~~vl~~i-~~~l~~~~iVVs~sn 234 (420)
|+|.....+.. .+ ...++++.+|+.+.-
T Consensus 188 aTp~gm~~~~~-~i~~~~l~~~~~V~DlvY 216 (272)
T 3pwz_A 188 ATSASLTADLP-PLPADVLGEAALAYELAY 216 (272)
T ss_dssp CSSGGGGTCCC-CCCGGGGTTCSEEEESSC
T ss_pred CCCCCCCCCCC-CCCHHHhCcCCEEEEeec
Confidence 99964311100 01 234567888888753
No 272
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=97.33 E-value=0.00029 Score=67.93 Aligned_cols=99 Identities=17% Similarity=0.205 Sum_probs=66.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeC--CHHHhccCCcEE
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATT--DAKTALLGADYC 203 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~-~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~t--d~~eal~~aDiV 203 (420)
.+++.|+|+|.+|.+++..|++.| . +|++++|+.++++.+.+.-.. . .++ ..+...+ ++++.+.++|+|
T Consensus 127 ~k~vlVlGaGG~g~aia~~L~~~G--~~~v~i~~R~~~~a~~la~~~~~-~-~~~----~~i~~~~~~~l~~~l~~~DiV 198 (283)
T 3jyo_A 127 LDSVVQVGAGGVGNAVAYALVTHG--VQKLQVADLDTSRAQALADVINN-A-VGR----EAVVGVDARGIEDVIAAADGV 198 (283)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTT--CSEEEEECSSHHHHHHHHHHHHH-H-HTS----CCEEEECSTTHHHHHHHSSEE
T ss_pred CCEEEEECCcHHHHHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHh-h-cCC----ceEEEcCHHHHHHHHhcCCEE
Confidence 579999999999999999999998 5 799999999887776543100 0 000 1233333 677778899999
Q ss_pred EEccChhhHHHHHHHh-hhcCCCCCeEEEec
Q 014700 204 LHAMPVQFSSSFLEGI-SDYVDPGLPFISLS 233 (420)
Q Consensus 204 IlaVp~~~l~~vl~~i-~~~l~~~~iVVs~s 233 (420)
|-|+|..-...--..+ ...++++.+|+.+.
T Consensus 199 InaTp~Gm~~~~~~pi~~~~l~~~~~v~Dlv 229 (283)
T 3jyo_A 199 VNATPMGMPAHPGTAFDVSCLTKDHWVGDVV 229 (283)
T ss_dssp EECSSTTSTTSCSCSSCGGGCCTTCEEEECC
T ss_pred EECCCCCCCCCCCCCCCHHHhCCCCEEEEec
Confidence 9999953211000001 23466777777765
No 273
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=97.33 E-value=0.00038 Score=67.80 Aligned_cols=93 Identities=16% Similarity=0.095 Sum_probs=64.8
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhc-------
Q 014700 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL------- 197 (420)
Q Consensus 127 ~mkI~IIGa-GamG~alA~~La~aG~~~~V~-l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal------- 197 (420)
|+||+|||+ |.||...+..|.+.+ .++. ++|++++.. .+.+. . ....+.++.++.+
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~--~~lvav~d~~~~~~-~~~~~------~------~~~~~~~~~~~ll~~~~~l~ 67 (312)
T 3o9z_A 3 MTRFALTGLAGYIAPRHLKAIKEVG--GVLVASLDPATNVG-LVDSF------F------PEAEFFTEPEAFEAYLEDLR 67 (312)
T ss_dssp CCEEEEECTTSSSHHHHHHHHHHTT--CEEEEEECSSCCCG-GGGGT------C------TTCEEESCHHHHHHHHHHHH
T ss_pred ceEEEEECCChHHHHHHHHHHHhCC--CEEEEEEcCCHHHH-HHHhh------C------CCCceeCCHHHHHHHhhhhc
Confidence 689999999 789999999998876 5554 678877541 11111 1 1346677888776
Q ss_pred ---cCCcEEEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCCc
Q 014700 198 ---LGADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLEL 238 (420)
Q Consensus 198 ---~~aDiVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~ 238 (420)
.+.|+|++|+|.....+++..... .++-|+ +-|.+..
T Consensus 68 ~~~~~vD~V~I~tP~~~H~~~~~~al~---aGkhVl-~EKPla~ 107 (312)
T 3o9z_A 68 DRGEGVDYLSIASPNHLHYPQIRMALR---LGANAL-SEKPLVL 107 (312)
T ss_dssp HTTCCCSEEEECSCGGGHHHHHHHHHH---TTCEEE-ECSSSCS
T ss_pred ccCCCCcEEEECCCchhhHHHHHHHHH---CCCeEE-EECCCCC
Confidence 578999999999887776665544 355554 5665544
No 274
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.31 E-value=0.00073 Score=69.71 Aligned_cols=82 Identities=18% Similarity=0.327 Sum_probs=56.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEc
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIla 206 (420)
++||.|+|+|.+|.+++..|++.+ +++|++++|+.++++.+.+.. ..... .+ .+.-..++.++++++|+||.|
T Consensus 23 ~k~VlIiGAGgiG~aia~~L~~~~-g~~V~v~~R~~~ka~~la~~~-~~~~~---~~--D~~d~~~l~~~l~~~DvVIn~ 95 (467)
T 2axq_A 23 GKNVLLLGSGFVAQPVIDTLAAND-DINVTVACRTLANAQALAKPS-GSKAI---SL--DVTDDSALDKVLADNDVVISL 95 (467)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTST-TEEEEEEESSHHHHHHHHGGG-TCEEE---EC--CTTCHHHHHHHHHTSSEEEEC
T ss_pred CCEEEEECChHHHHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHhc-CCcEE---EE--ecCCHHHHHHHHcCCCEEEEC
Confidence 679999999999999999999983 289999999999888876531 11000 00 000001344567799999999
Q ss_pred cChhhHHHH
Q 014700 207 MPVQFSSSF 215 (420)
Q Consensus 207 Vp~~~l~~v 215 (420)
+|......+
T Consensus 96 tp~~~~~~v 104 (467)
T 2axq_A 96 IPYTFHPNV 104 (467)
T ss_dssp SCGGGHHHH
T ss_pred CchhhhHHH
Confidence 997643333
No 275
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=97.30 E-value=0.002 Score=60.84 Aligned_cols=104 Identities=19% Similarity=0.209 Sum_probs=66.1
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhc-CCCCeEEEE-eCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhcc-CCcEE
Q 014700 128 NKVVVLGG-GSFGTAMAAHVANK-KSQLKVYML-MRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL-GADYC 203 (420)
Q Consensus 128 mkI~IIGa-GamG~alA~~La~a-G~~~~V~l~-~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~-~aDiV 203 (420)
|||+|+|+ |.||..++..+.+. + ++|... ++. +|+++.+. ++|+|
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~--~elva~~d~~-----------------------------~dl~~~~~~~~Dvv 49 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADD--LTLSAELDAG-----------------------------DPLSLLTDGNTEVV 49 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTT--CEEEEEECTT-----------------------------CCTHHHHHTTCCEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC--CEEEEEEccC-----------------------------CCHHHHhccCCcEE
Confidence 69999997 99999999998865 5 888744 442 13444443 78999
Q ss_pred EEccChhhHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCeEEEECcccHHH
Q 014700 204 LHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALE 270 (420)
Q Consensus 204 IlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~~vl~GP~~a~e 270 (420)
|-++.+..+.+.++.... .+..+|..+.|+..+....+.+..++. ....++..|++.-.
T Consensus 50 IDfT~p~a~~~~~~~a~~---~g~~~VigTTG~~~e~~~~l~~aa~~~-----~~~~vv~a~N~siG 108 (245)
T 1p9l_A 50 IDFTHPDVVMGNLEFLID---NGIHAVVGTTGFTAERFQQVESWLVAK-----PNTSVLIAPNFAIG 108 (245)
T ss_dssp EECSCTTTHHHHHHHHHH---TTCEEEECCCCCCHHHHHHHHHHHHTS-----TTCEEEECSCCCHH
T ss_pred EEccChHHHHHHHHHHHH---cCCCEEEcCCCCCHHHHHHHHHHHHhC-----CCCCEEEECCccHH
Confidence 977777776666655443 356666667787764332222222111 12456778887653
No 276
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=97.30 E-value=0.00028 Score=71.41 Aligned_cols=92 Identities=15% Similarity=0.176 Sum_probs=57.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCC-CeEEEEeCCHHHHHHHHHhcCCCCCCCCCC-CCCceEEeCCHHHhccC--CcE
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQ-LKVYMLMRDPAVCQSINEKHCNCRYFPEQK-LPENVIATTDAKTALLG--ADY 202 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~-~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~-l~~~i~a~td~~eal~~--aDi 202 (420)
|+||+|+|+|.+|..++..|++.|.- .+|.+++|+.++++.+.+.-... .-+... ....+.-..++++++++ +|+
T Consensus 1 M~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~-~~~~~~~~~~D~~d~~~l~~~l~~~~~Dv 79 (405)
T 4ina_A 1 MAKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAK-GYGEIDITTVDADSIEELVALINEVKPQI 79 (405)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHT-TCCCCEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhh-cCCceEEEEecCCCHHHHHHHHHhhCCCE
Confidence 47999999999999999999998711 28999999999887776531100 000000 00000001234455555 899
Q ss_pred EEEccChhhHHHHHHHh
Q 014700 203 CLHAMPVQFSSSFLEGI 219 (420)
Q Consensus 203 VIlaVp~~~l~~vl~~i 219 (420)
||.+.+......+++..
T Consensus 80 Vin~ag~~~~~~v~~a~ 96 (405)
T 4ina_A 80 VLNIALPYQDLTIMEAC 96 (405)
T ss_dssp EEECSCGGGHHHHHHHH
T ss_pred EEECCCcccChHHHHHH
Confidence 99999976555555443
No 277
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=97.29 E-value=0.00031 Score=64.03 Aligned_cols=76 Identities=11% Similarity=0.119 Sum_probs=51.3
Q ss_pred CCe-EEEEcc-cHHHHHHHHHHH-hcCCCCeEEEEeCCHH-HHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcE
Q 014700 127 TNK-VVVLGG-GSFGTAMAAHVA-NKKSQLKVYMLMRDPA-VCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADY 202 (420)
Q Consensus 127 ~mk-I~IIGa-GamG~alA~~La-~aG~~~~V~l~~r~~~-~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDi 202 (420)
||| |.|.|+ |.+|.+++..|+ +.| ++|++++|+++ .++.+.+.+.....+.. .+.-..+++++++++|+
T Consensus 4 mmk~vlVtGasg~iG~~~~~~l~~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-----D~~d~~~~~~~~~~~d~ 76 (221)
T 3r6d_A 4 MYXYITILGAAGQIAQXLTATLLTYTD--MHITLYGRQLKTRIPPEIIDHERVTVIEG-----SFQNPGXLEQAVTNAEV 76 (221)
T ss_dssp SCSEEEEESTTSHHHHHHHHHHHHHCC--CEEEEEESSHHHHSCHHHHTSTTEEEEEC-----CTTCHHHHHHHHTTCSE
T ss_pred eEEEEEEEeCCcHHHHHHHHHHHhcCC--ceEEEEecCccccchhhccCCCceEEEEC-----CCCCHHHHHHHHcCCCE
Confidence 345 999995 999999999999 788 99999999988 76665422211111100 00001134456789999
Q ss_pred EEEccCh
Q 014700 203 CLHAMPV 209 (420)
Q Consensus 203 VIlaVp~ 209 (420)
||.+...
T Consensus 77 vv~~ag~ 83 (221)
T 3r6d_A 77 VFVGAME 83 (221)
T ss_dssp EEESCCC
T ss_pred EEEcCCC
Confidence 9998864
No 278
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=97.29 E-value=0.00043 Score=67.61 Aligned_cols=93 Identities=14% Similarity=0.071 Sum_probs=64.1
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhc-------
Q 014700 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL------- 197 (420)
Q Consensus 127 ~mkI~IIGa-GamG~alA~~La~aG~~~~V~-l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal------- 197 (420)
|+||+|||+ |.||...+..|.+.+ .++. +++++++.. .+.+. . ....+.+|.++.+
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~--~~lvav~d~~~~~~-~~~~~------~------~~~~~~~~~~~ll~~~~~l~ 67 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPRHMRAIKDTG--NCLVSAYDINDSVG-IIDSI------S------PQSEFFTEFEFFLDHASNLK 67 (318)
T ss_dssp CCEEEEETTTSSSHHHHHHHHHHTT--CEEEEEECSSCCCG-GGGGT------C------TTCEEESSHHHHHHHHHHHT
T ss_pred ceEEEEECCCcHHHHHHHHHHHhCC--CEEEEEEcCCHHHH-HHHhh------C------CCCcEECCHHHHHHhhhhhh
Confidence 689999999 789999999998876 5555 678876531 11111 1 1346677888765
Q ss_pred ----cCCcEEEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCCc
Q 014700 198 ----LGADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLEL 238 (420)
Q Consensus 198 ----~~aDiVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~ 238 (420)
.+.|+|++|+|.....+++..... .++-|+ +-|.+..
T Consensus 68 ~~~~~~vD~V~I~tP~~~H~~~~~~al~---aGkhVl-~EKPla~ 108 (318)
T 3oa2_A 68 RDSATALDYVSICSPNYLHYPHIAAGLR---LGCDVI-CEKPLVP 108 (318)
T ss_dssp TSTTTSCCEEEECSCGGGHHHHHHHHHH---TTCEEE-ECSSCCS
T ss_pred hccCCCCcEEEECCCcHHHHHHHHHHHH---CCCeEE-EECCCcC
Confidence 568999999999887776665544 355544 4565543
No 279
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=97.29 E-value=0.0021 Score=62.59 Aligned_cols=101 Identities=15% Similarity=0.218 Sum_probs=63.9
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeC--CHHHHHH----HHHhcCCCCCCCCCCCCCceEEeCC-HHHhccC
Q 014700 128 NKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMR--DPAVCQS----INEKHCNCRYFPEQKLPENVIATTD-AKTALLG 199 (420)
Q Consensus 128 mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r--~~~~~~~----i~~~g~~~~~l~~~~l~~~i~a~td-~~eal~~ 199 (420)
|||+|+|+ |.+|.+++..|+..+...++.++|+ ++++++. +.... . +.+ .+..+...+| +.+++++
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~--~-~~~---~~~~i~~~~d~l~~al~g 74 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDAL--A-GTR---SDANIYVESDENLRIIDE 74 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHH--T-TSC---CCCEEEEEETTCGGGGTT
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhH--H-hcC---CCeEEEeCCcchHHHhCC
Confidence 69999999 9999999999998773346899999 7653322 22210 0 110 1112333332 5678999
Q ss_pred CcEEEEcc--Ch--------------hhHHHHHHHhhhcCCCCCeEEEeccCC
Q 014700 200 ADYCLHAM--PV--------------QFSSSFLEGISDYVDPGLPFISLSKGL 236 (420)
Q Consensus 200 aDiVIlaV--p~--------------~~l~~vl~~i~~~l~~~~iVVs~snGi 236 (420)
+|+||++. |. ..++++++.+..+- +.+|+..+|.+
T Consensus 75 aD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~--~~~vlv~SNPv 125 (313)
T 1hye_A 75 SDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC--DTKIFVITNPV 125 (313)
T ss_dssp CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC--CCEEEECSSSH
T ss_pred CCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC--CeEEEEecCcH
Confidence 99999875 21 12445556666554 66777778744
No 280
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=97.28 E-value=0.00058 Score=67.50 Aligned_cols=35 Identities=20% Similarity=0.342 Sum_probs=31.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCH
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~ 162 (420)
..||.|||+|..|+.+|..|+..|. -+++++|++.
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGV-g~ItlvD~D~ 68 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGV-RKITFVDNGT 68 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCC-CEEEEecCCE
Confidence 5799999999999999999999995 5899998763
No 281
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=97.27 E-value=0.0028 Score=61.48 Aligned_cols=105 Identities=16% Similarity=0.140 Sum_probs=71.8
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhcc--C-Cc
Q 014700 126 RTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--G-AD 201 (420)
Q Consensus 126 ~~mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~--~-aD 201 (420)
...+|.|+|+ |.||..+...|.+.| ++ .++..++... +. . ..++.+..+++++.+ + +|
T Consensus 12 ~~~~vvV~Gasg~~G~~~~~~l~~~g--~~-~v~~VnP~~~------g~--~-------i~G~~vy~sl~el~~~~~~~D 73 (297)
T 2yv2_A 12 SETRVLVQGITGREGSFHAKAMLEYG--TK-VVAGVTPGKG------GS--E-------VHGVPVYDSVKEALAEHPEIN 73 (297)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHT--CE-EEEEECTTCT------TC--E-------ETTEEEESSHHHHHHHCTTCC
T ss_pred CCCEEEEECCCCCHHHHHHHHHHhCC--Cc-EEEEeCCCCC------Cc--e-------ECCEeeeCCHHHHhhcCCCCC
Confidence 3568888898 999999999999887 77 4455444310 00 0 014677788888765 5 99
Q ss_pred EEEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHH
Q 014700 202 YCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQ 250 (420)
Q Consensus 202 iVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~ 250 (420)
++++++|.....+++++.... . -..+|.++.|+..+..+.+.+..++
T Consensus 74 vaIi~vp~~~~~~~v~ea~~~-G-i~~vVi~t~G~~~~~~~~l~~~A~~ 120 (297)
T 2yv2_A 74 TSIVFVPAPFAPDAVYEAVDA-G-IRLVVVITEGIPVHDTMRFVNYARQ 120 (297)
T ss_dssp EEEECCCGGGHHHHHHHHHHT-T-CSEEEECCCCCCHHHHHHHHHHHHH
T ss_pred EEEEecCHHHHHHHHHHHHHC-C-CCEEEEECCCCCHHHHHHHHHHHHH
Confidence 999999999999988887663 1 1235667889875433344444443
No 282
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=97.26 E-value=0.00065 Score=70.18 Aligned_cols=91 Identities=13% Similarity=0.054 Sum_probs=67.4
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEE
Q 014700 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (420)
Q Consensus 126 ~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIl 205 (420)
..++++|+|+|.+|.++|..|+..| .+|+++++++...+.....+. . ..++++++..+|+++.
T Consensus 264 ~GKtVvVtGaGgIG~aiA~~Laa~G--A~Viv~D~~~~~a~~Aa~~g~--------------d-v~~lee~~~~aDvVi~ 326 (488)
T 3ond_A 264 AGKVAVVAGYGDVGKGCAAALKQAG--ARVIVTEIDPICALQATMEGL--------------Q-VLTLEDVVSEADIFVT 326 (488)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHHTTC--------------E-ECCGGGTTTTCSEEEE
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEcCCHHHHHHHHHhCC--------------c-cCCHHHHHHhcCEEEe
Confidence 4579999999999999999999998 899999999877665555431 1 2366777889999999
Q ss_pred ccChhhHHHHHHHhhhcCCCCCeEEEeccC
Q 014700 206 AMPVQFSSSFLEGISDYVDPGLPFISLSKG 235 (420)
Q Consensus 206 aVp~~~l~~vl~~i~~~l~~~~iVVs~snG 235 (420)
+.....+- -++....++++.+|+++..+
T Consensus 327 atG~~~vl--~~e~l~~mk~gaiVvNaG~~ 354 (488)
T 3ond_A 327 TTGNKDII--MLDHMKKMKNNAIVCNIGHF 354 (488)
T ss_dssp CSSCSCSB--CHHHHTTSCTTEEEEESSST
T ss_pred CCCChhhh--hHHHHHhcCCCeEEEEcCCC
Confidence 87643310 11234556788888887654
No 283
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=97.25 E-value=0.00024 Score=68.11 Aligned_cols=90 Identities=19% Similarity=0.225 Sum_probs=62.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEc
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIla 206 (420)
.++|.|||+|.+|.+++..|++.| .+|++++|+.++++.+.+.+. .+. +.++ +.++|+||-|
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G--~~v~V~nRt~~ka~~la~~~~--------------~~~-~~~~-l~~~DiVIna 179 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQG--LQVSVLNRSSRGLDFFQRLGC--------------DCF-MEPP-KSAFDLIINA 179 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSCTTHHHHHHHTC--------------EEE-SSCC-SSCCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHCCC--------------eEe-cHHH-hccCCEEEEc
Confidence 679999999999999999999998 899999999988888773221 111 2223 3489999999
Q ss_pred cChhhHH-HHH--HHhhhcCCCCCeEEEecc
Q 014700 207 MPVQFSS-SFL--EGISDYVDPGLPFISLSK 234 (420)
Q Consensus 207 Vp~~~l~-~vl--~~i~~~l~~~~iVVs~sn 234 (420)
+|..... ..+ +.+...++++.+++++.-
T Consensus 180 Tp~Gm~~~~~l~~~~l~~~l~~~~~v~D~vY 210 (269)
T 3phh_A 180 TSASLHNELPLNKEVLKGYFKEGKLAYDLAY 210 (269)
T ss_dssp CTTCCCCSCSSCHHHHHHHHHHCSEEEESCC
T ss_pred ccCCCCCCCCCChHHHHhhCCCCCEEEEeCC
Confidence 9853100 000 111113446788888864
No 284
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=97.23 E-value=0.0013 Score=64.98 Aligned_cols=102 Identities=20% Similarity=0.279 Sum_probs=66.9
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhcCCCCe-----EEEEeCCH--HHH----HHHHHhcCCCCCCCCCCCCCceEEeCCHH
Q 014700 127 TNKVVVLG-GGSFGTAMAAHVANKKSQLK-----VYMLMRDP--AVC----QSINEKHCNCRYFPEQKLPENVIATTDAK 194 (420)
Q Consensus 127 ~mkI~IIG-aGamG~alA~~La~aG~~~~-----V~l~~r~~--~~~----~~i~~~g~~~~~l~~~~l~~~i~a~td~~ 194 (420)
.+||+|+| +|.+|++++..|+..+.-.+ +.++|+++ +.+ ..+.. ... .+...+...++..
T Consensus 3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~--~~~------~~~~~~~~~~~~~ 74 (333)
T 5mdh_A 3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQD--CAL------PLLKDVIATDKEE 74 (333)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHH--TCC------TTEEEEEEESCHH
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHh--hhh------cccCCEEEcCCcH
Confidence 47999999 79999999999998763114 99999964 222 22222 111 1112456667777
Q ss_pred HhccCCcEEEEcc--C---h-----------hhHHHHHHHhhhcCCCCCeEEEeccCC
Q 014700 195 TALLGADYCLHAM--P---V-----------QFSSSFLEGISDYVDPGLPFISLSKGL 236 (420)
Q Consensus 195 eal~~aDiVIlaV--p---~-----------~~l~~vl~~i~~~l~~~~iVVs~snGi 236 (420)
+++++||+||++- | . ..++++++.+..+-+++..++.++|-.
T Consensus 75 ~~~~daDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsNPv 132 (333)
T 5mdh_A 75 IAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNPA 132 (333)
T ss_dssp HHTTTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred HHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCch
Confidence 7899999999974 2 1 125566667766654444577778744
No 285
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=97.21 E-value=0.00044 Score=68.83 Aligned_cols=96 Identities=19% Similarity=0.239 Sum_probs=65.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEE--eCCHHHhccCCcEEE
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIA--TTDAKTALLGADYCL 204 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a--~td~~eal~~aDiVI 204 (420)
.++|.|+|+|.+|.+++..+...| .+|++++|++++.+.+.+.+... . .... ..++.+.+.++|+||
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~G--a~V~v~dr~~~r~~~~~~~~~~~--~-------~~~~~~~~~~~~~~~~~DvVI 235 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLG--AQVQIFDINVERLSYLETLFGSR--V-------ELLYSNSAEIETAVAEADLLI 235 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHGGG--S-------EEEECCHHHHHHHHHTCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CEEEEEeCCHHHHHHHHHhhCce--e-------EeeeCCHHHHHHHHcCCCEEE
Confidence 379999999999999999999988 79999999999888776654210 0 0000 113445677899999
Q ss_pred EccChhhH--HH-HHHHhhhcCCCCCeEEEec
Q 014700 205 HAMPVQFS--SS-FLEGISDYVDPGLPFISLS 233 (420)
Q Consensus 205 laVp~~~l--~~-vl~~i~~~l~~~~iVVs~s 233 (420)
-|++.... .. +.+.....++++..|+.+.
T Consensus 236 ~~~~~~~~~~~~li~~~~~~~~~~g~~ivdv~ 267 (361)
T 1pjc_A 236 GAVLVPGRRAPILVPASLVEQMRTGSVIVDVA 267 (361)
T ss_dssp ECCCCTTSSCCCCBCHHHHTTSCTTCEEEETT
T ss_pred ECCCcCCCCCCeecCHHHHhhCCCCCEEEEEe
Confidence 99964320 00 0122334566788888764
No 286
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=97.19 E-value=0.00062 Score=64.27 Aligned_cols=87 Identities=16% Similarity=0.174 Sum_probs=56.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCH-------------------HHHHHHHHhc--CCCCCCCCCCC--
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP-------------------AVCQSINEKH--CNCRYFPEQKL-- 183 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~-------------------~~~~~i~~~g--~~~~~l~~~~l-- 183 (420)
.++|.|||+|.+|+.++..|++.|. .+++++|++. .+++.+.+.- .+ |...+
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv-~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~n----p~~~v~~ 105 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGV-GNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRIN----PHIAITP 105 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTC-SEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHC----TTSEEEE
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCC-CeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHC----CCcEEEE
Confidence 4799999999999999999999983 3899999986 4554443220 11 11110
Q ss_pred -CCceEEeCCHHHhccCCcEEEEccChhhHHHHHHHh
Q 014700 184 -PENVIATTDAKTALLGADYCLHAMPVQFSSSFLEGI 219 (420)
Q Consensus 184 -~~~i~a~td~~eal~~aDiVIlaVp~~~l~~vl~~i 219 (420)
+..+. ..+.++.++++|+||.|+.....+..+.+.
T Consensus 106 ~~~~~~-~~~~~~~~~~~DvVi~~~d~~~~~~~l~~~ 141 (249)
T 1jw9_B 106 VNALLD-DAELAALIAEHDLVLDCTDNVAVRNQLNAG 141 (249)
T ss_dssp ECSCCC-HHHHHHHHHTSSEEEECCSSHHHHHHHHHH
T ss_pred EeccCC-HhHHHHHHhCCCEEEEeCCCHHHHHHHHHH
Confidence 00010 012345567899999999876665555554
No 287
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=97.17 E-value=0.00068 Score=66.50 Aligned_cols=87 Identities=20% Similarity=0.162 Sum_probs=61.0
Q ss_pred CCeEEEEcccHHHH-HHHHHHHhcCCCCeEE-EEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhcc---CCc
Q 014700 127 TNKVVVLGGGSFGT-AMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL---GAD 201 (420)
Q Consensus 127 ~mkI~IIGaGamG~-alA~~La~aG~~~~V~-l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~---~aD 201 (420)
++||+|||+|.||. ..+..|.+.. +.+|. +++++++. .++...+|+++++. +.|
T Consensus 25 ~~rvgiiG~G~ig~~~~~~~l~~~~-~~~lvav~d~~~~~--------------------~g~~~~~~~~~ll~~~~~vD 83 (330)
T 4ew6_A 25 PINLAIVGVGKIVRDQHLPSIAKNA-NFKLVATASRHGTV--------------------EGVNSYTTIEAMLDAEPSID 83 (330)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHHCT-TEEEEEEECSSCCC--------------------TTSEEESSHHHHHHHCTTCC
T ss_pred CceEEEEecCHHHHHHHHHHHHhCC-CeEEEEEEeCChhh--------------------cCCCccCCHHHHHhCCCCCC
Confidence 46999999999998 7888888753 26665 56776431 13456778988765 489
Q ss_pred EEEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCCc
Q 014700 202 YCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLEL 238 (420)
Q Consensus 202 iVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~ 238 (420)
+|++|+|.....+++..... .++-|+ +-|.+..
T Consensus 84 ~V~i~tp~~~H~~~~~~al~---aGkhVl-~EKP~a~ 116 (330)
T 4ew6_A 84 AVSLCMPPQYRYEAAYKALV---AGKHVF-LEKPPGA 116 (330)
T ss_dssp EEEECSCHHHHHHHHHHHHH---TTCEEE-ECSSSCS
T ss_pred EEEEeCCcHHHHHHHHHHHH---cCCcEE-EeCCCCC
Confidence 99999998877666655543 455554 5665543
No 288
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=97.17 E-value=0.00068 Score=66.80 Aligned_cols=91 Identities=16% Similarity=0.102 Sum_probs=56.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHHh-cCCCC-CCCCCC--C-CCceEEeCCHHHhccCC
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEK-HCNCR-YFPEQK--L-PENVIATTDAKTALLGA 200 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~-l~~r~~~~~~~i~~~-g~~~~-~l~~~~--l-~~~i~a~td~~eal~~a 200 (420)
++||+|+|+|.||..++..|.+.. +.+|. +.+++++.+..+.+. |.... .+++.. + ...+.+..++++.+.++
T Consensus 2 ~irVgIiG~G~iG~~~~r~l~~~~-~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~d~~~l~~~v 80 (334)
T 2czc_A 2 KVKVGVNGYGTIGKRVAYAVTKQD-DMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKV 80 (334)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCT-TEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTC
T ss_pred CcEEEEEeEhHHHHHHHHHHhcCC-CCEEEEEEcCCHHHHHHHHHhcCccccccccccceeccCCceEEcCcHHHhccCC
Confidence 469999999999999999998764 25655 457776665554432 21100 000000 0 00113345788877899
Q ss_pred cEEEEccChhhHHHHHHH
Q 014700 201 DYCLHAMPVQFSSSFLEG 218 (420)
Q Consensus 201 DiVIlaVp~~~l~~vl~~ 218 (420)
|+|++|+|.....+....
T Consensus 81 DvV~~aTp~~~h~~~a~~ 98 (334)
T 2czc_A 81 DIIVDATPGGIGAKNKPL 98 (334)
T ss_dssp SEEEECCSTTHHHHHHHH
T ss_pred CEEEECCCccccHHHHHH
Confidence 999999998765454443
No 289
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=97.15 E-value=0.00091 Score=65.36 Aligned_cols=95 Identities=18% Similarity=0.252 Sum_probs=59.7
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEE-EEeCCHHH-HHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhc-----c
Q 014700 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAV-CQSINEKHCNCRYFPEQKLPENVIATTDAKTAL-----L 198 (420)
Q Consensus 126 ~~mkI~IIGaGamG~alA~~La~aG~~~~V~-l~~r~~~~-~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal-----~ 198 (420)
.++||+|||+|.||..++..|.++..+.++. +++++++. .+.+.+.... . ...++.++.+ .
T Consensus 3 ~~irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~-~-----------~~~~~~e~ll~~~~~~ 70 (312)
T 1nvm_B 3 QKLKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGV-T-----------TTYAGVEGLIKLPEFA 70 (312)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTC-C-----------EESSHHHHHHHSGGGG
T ss_pred CCCEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCC-C-----------cccCCHHHHHhccCCC
Confidence 4579999999999999999996621124544 57888665 4454432110 0 1223555553 3
Q ss_pred CCcEEEEccChhhHHHHHHHhhhcCCCCCeEEEec
Q 014700 199 GADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLS 233 (420)
Q Consensus 199 ~aDiVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~s 233 (420)
+.|+||+|+|.....+........ ++++.|++..
T Consensus 71 ~iDvV~~atp~~~h~~~a~~al~a-~~Gk~Vi~ek 104 (312)
T 1nvm_B 71 DIDFVFDATSASAHVQNEALLRQA-KPGIRLIDLT 104 (312)
T ss_dssp GEEEEEECSCHHHHHHHHHHHHHH-CTTCEEEECS
T ss_pred CCcEEEECCChHHHHHHHHHHHHh-CCCCEEEEcC
Confidence 589999999987766666555432 1366676543
No 290
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=97.14 E-value=0.0018 Score=66.31 Aligned_cols=94 Identities=13% Similarity=0.155 Sum_probs=62.5
Q ss_pred hcCCCeEEEEcccHHHHHHHHHHHhc--------CCCCeEE-EEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHH
Q 014700 124 LERTNKVVVLGGGSFGTAMAAHVANK--------KSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAK 194 (420)
Q Consensus 124 ~~~~mkI~IIGaGamG~alA~~La~a--------G~~~~V~-l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~ 194 (420)
|+..+||+|||+|.||..++..|.++ |.+.+|. +++|+++..+.+.. ....++|++
T Consensus 7 MMk~irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~~~~~~~---------------~~~~~~d~~ 71 (444)
T 3mtj_A 7 GMKPIHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKAEALAG---------------GLPLTTNPF 71 (444)
T ss_dssp SCSCEEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHHHHHHHHT---------------TCCEESCTH
T ss_pred hhCcccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHHHhhhhcc---------------cCcccCCHH
Confidence 44456899999999999999887642 3224555 56788876554421 124567888
Q ss_pred Hhcc--CCcEEEEccCh-hhHHHHHHHhhhcCCCCCeEEEeccC
Q 014700 195 TALL--GADYCLHAMPV-QFSSSFLEGISDYVDPGLPFISLSKG 235 (420)
Q Consensus 195 eal~--~aDiVIlaVp~-~~l~~vl~~i~~~l~~~~iVVs~snG 235 (420)
+.+. +.|+|++|+|. ....+++... ++.++-|++.-++
T Consensus 72 ell~d~diDvVve~tp~~~~h~~~~~~A---L~aGKhVvtenka 112 (444)
T 3mtj_A 72 DVVDDPEIDIVVELIGGLEPARELVMQA---IANGKHVVTANKH 112 (444)
T ss_dssp HHHTCTTCCEEEECCCSSTTHHHHHHHH---HHTTCEEEECCHH
T ss_pred HHhcCCCCCEEEEcCCCchHHHHHHHHH---HHcCCEEEECCcc
Confidence 8775 57999999996 5555554333 3357777765553
No 291
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=97.14 E-value=0.00069 Score=66.95 Aligned_cols=100 Identities=15% Similarity=0.204 Sum_probs=62.8
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCH---HHHHHHHHhcCCCCCCCCCCCCCceEEeC--CHHHhccCC
Q 014700 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDP---AVCQSINEKHCNCRYFPEQKLPENVIATT--DAKTALLGA 200 (420)
Q Consensus 127 ~mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r~~---~~~~~i~~~g~~~~~l~~~~l~~~i~a~t--d~~eal~~a 200 (420)
|+||+|+|+ |.+|..+...|.+.. ++++..+..+. ..-+.+.+.+.. +.+. ..+.+.. +.++...++
T Consensus 4 M~kv~IvGatG~vG~~l~~~L~~~p-~~el~~l~s~~~~~saGk~~~~~~p~---~~~~---~~~~v~~~~~~~~~~~~~ 76 (337)
T 3dr3_A 4 MLNTLIVGASGYAGAELVTYVNRHP-HMNITALTVSAQSNDAGKLISDLHPQ---LKGI---VELPLQPMSDISEFSPGV 76 (337)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCT-TEEEEEEEEETTCTTTTSBHHHHCGG---GTTT---CCCBEEEESSGGGTCTTC
T ss_pred ceEEEEECCCChHHHHHHHHHHhCC-CCcEEEEEecCchhhcCCchHHhCcc---ccCc---cceeEeccCCHHHHhcCC
Confidence 579999995 999999999998853 36777664332 221223222110 1111 0112221 444533899
Q ss_pred cEEEEccChhhHHHHHHHhhhcCCCCCeEEEeccCC
Q 014700 201 DYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGL 236 (420)
Q Consensus 201 DiVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi 236 (420)
|+||+|+|.....++...+.. .+..||+++.-.
T Consensus 77 Dvvf~a~p~~~s~~~~~~~~~---~g~~vIDlSa~f 109 (337)
T 3dr3_A 77 DVVFLATAHEVSHDLAPQFLE---AGCVVFDLSGAF 109 (337)
T ss_dssp SEEEECSCHHHHHHHHHHHHH---TTCEEEECSSTT
T ss_pred CEEEECCChHHHHHHHHHHHH---CCCEEEEcCCcc
Confidence 999999998887777766543 578899887643
No 292
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=97.12 E-value=0.00091 Score=64.06 Aligned_cols=68 Identities=19% Similarity=0.186 Sum_probs=52.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEc
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIla 206 (420)
.++|.|||+|.+|.+++..|.+.|. .+|++++|+.++++.+.+.- . .....++. +.++|+||-|
T Consensus 119 ~~~vlvlGaGgaarav~~~L~~~G~-~~i~v~nRt~~ka~~la~~~-~------------~~~~~~~~--~~~~DivIna 182 (271)
T 1npy_A 119 NAKVIVHGSGGMAKAVVAAFKNSGF-EKLKIYARNVKTGQYLAALY-G------------YAYINSLE--NQQADILVNV 182 (271)
T ss_dssp TSCEEEECSSTTHHHHHHHHHHTTC-CCEEEECSCHHHHHHHHHHH-T------------CEEESCCT--TCCCSEEEEC
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCC-CEEEEEeCCHHHHHHHHHHc-C------------Cccchhhh--cccCCEEEEC
Confidence 4789999999999999999999882 38999999998888887541 0 01111222 4679999999
Q ss_pred cChh
Q 014700 207 MPVQ 210 (420)
Q Consensus 207 Vp~~ 210 (420)
+|..
T Consensus 183 Tp~g 186 (271)
T 1npy_A 183 TSIG 186 (271)
T ss_dssp SSTT
T ss_pred CCCC
Confidence 9964
No 293
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=97.11 E-value=0.0011 Score=66.26 Aligned_cols=88 Identities=10% Similarity=0.013 Sum_probs=59.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhcc-CCcEEEE
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL-GADYCLH 205 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~-~aDiVIl 205 (420)
.++|+|+|+|+||..+|..|.+.| .+|+++|++++.++++.+.. . .... +.++.+. +||+++.
T Consensus 173 GktV~V~G~G~VG~~~A~~L~~~G--akVvv~D~~~~~l~~~a~~~-g------------a~~v-~~~~ll~~~~DIvip 236 (364)
T 1leh_A 173 GLAVSVQGLGNVAKALCKKLNTEG--AKLVVTDVNKAAVSAAVAEE-G------------ADAV-APNAIYGVTCDIFAP 236 (364)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHHHH-C------------CEEC-CGGGTTTCCCSEEEE
T ss_pred cCEEEEECchHHHHHHHHHHHHCC--CEEEEEcCCHHHHHHHHHHc-C------------CEEE-ChHHHhccCCcEeec
Confidence 579999999999999999999998 89999999998877766541 1 1222 3344444 8999998
Q ss_pred ccChhhH-HHHHHHhhhcCCCCCeEEEeccC
Q 014700 206 AMPVQFS-SSFLEGISDYVDPGLPFISLSKG 235 (420)
Q Consensus 206 aVp~~~l-~~vl~~i~~~l~~~~iVVs~snG 235 (420)
|.-...+ .+.++. + ...+|+..+|+
T Consensus 237 ~a~~~~I~~~~~~~----l-g~~iV~e~An~ 262 (364)
T 1leh_A 237 CALGAVLNDFTIPQ----L-KAKVIAGSADN 262 (364)
T ss_dssp CSCSCCBSTTHHHH----C-CCSEECCSCSC
T ss_pred cchHHHhCHHHHHh----C-CCcEEEeCCCC
Confidence 8543322 122233 2 23456656664
No 294
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=97.10 E-value=0.00075 Score=66.89 Aligned_cols=100 Identities=15% Similarity=0.151 Sum_probs=60.2
Q ss_pred cCCCeEEEEc-ccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEE
Q 014700 125 ERTNKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (420)
Q Consensus 125 ~~~mkI~IIG-aGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiV 203 (420)
+.++||+|+| .|.+|..+.+.|.+.. +.++..+.+.......+.+.+. .+.+. ..+.+ .++++ +.++|+|
T Consensus 2 ~~~~kV~IiGAtG~iG~~llr~L~~~p-~~elv~v~s~~~~g~~~~~~~~---~~~g~---~~~~~-~~~~~-~~~vDvV 72 (345)
T 2ozp_A 2 TGKKTLSIVGASGYAGGEFLRLALSHP-YLEVKQVTSRRFAGEPVHFVHP---NLRGR---TNLKF-VPPEK-LEPADIL 72 (345)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHTCT-TEEEEEEBCSTTTTSBGGGTCG---GGTTT---CCCBC-BCGGG-CCCCSEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHcCC-CcEEEEEECchhhCchhHHhCc---hhcCc---ccccc-cchhH-hcCCCEE
Confidence 3468999999 5999999999998765 3577766553322111111110 01110 01111 13333 5789999
Q ss_pred EEccChhhHHHHHHHhhhcCCCCCeEEEeccCC
Q 014700 204 LHAMPVQFSSSFLEGISDYVDPGLPFISLSKGL 236 (420)
Q Consensus 204 IlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi 236 (420)
|+|+|.....+.+..+. ..+..||+++.-.
T Consensus 73 ~~a~g~~~s~~~a~~~~---~aG~~VId~Sa~~ 102 (345)
T 2ozp_A 73 VLALPHGVFAREFDRYS---ALAPVLVDLSADF 102 (345)
T ss_dssp EECCCTTHHHHTHHHHH---TTCSEEEECSSTT
T ss_pred EEcCCcHHHHHHHHHHH---HCCCEEEEcCccc
Confidence 99999887776665543 4577888887533
No 295
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=97.08 E-value=0.00022 Score=65.90 Aligned_cols=82 Identities=12% Similarity=0.129 Sum_probs=55.3
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhcc-CCcEE
Q 014700 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL-GADYC 203 (420)
Q Consensus 126 ~~mkI~IIGaGamG~alA~~La~aG~~~~V~-l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~-~aDiV 203 (420)
..+||+|||+|.+|..++..+.... ++++. ++|.++++... ...+. ++...+++++.++ +.|+|
T Consensus 79 ~~~rV~IIGaG~~G~~la~~~~~~~-g~~iVg~~D~dp~k~g~---------~i~gv----~V~~~~dl~ell~~~ID~V 144 (211)
T 2dt5_A 79 RKWGLCIVGMGRLGSALADYPGFGE-SFELRGFFDVDPEKVGR---------PVRGG----VIEHVDLLPQRVPGRIEIA 144 (211)
T ss_dssp SCEEEEEECCSHHHHHHHHCSCCCS-SEEEEEEEESCTTTTTC---------EETTE----EEEEGGGHHHHSTTTCCEE
T ss_pred CCCEEEEECccHHHHHHHHhHhhcC-CcEEEEEEeCCHHHHhh---------hhcCC----eeecHHhHHHHHHcCCCEE
Confidence 3479999999999999998633221 26665 56777753211 01111 2334567888765 58999
Q ss_pred EEccChhhHHHHHHHhhh
Q 014700 204 LHAMPVQFSSSFLEGISD 221 (420)
Q Consensus 204 IlaVp~~~l~~vl~~i~~ 221 (420)
++|+|+....++++.+..
T Consensus 145 iIA~Ps~~~~ei~~~l~~ 162 (211)
T 2dt5_A 145 LLTVPREAAQKAADLLVA 162 (211)
T ss_dssp EECSCHHHHHHHHHHHHH
T ss_pred EEeCCchhHHHHHHHHHH
Confidence 999998887777777654
No 296
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=97.08 E-value=0.00068 Score=69.57 Aligned_cols=74 Identities=15% Similarity=0.251 Sum_probs=52.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEE-eC---CHHHhccCCcE
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIA-TT---DAKTALLGADY 202 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a-~t---d~~eal~~aDi 202 (420)
+++|.|+|+|.+|.+++..|++.| ++|++++|+.++++.+.+.. ++.. .+.. .+ +++++++++|+
T Consensus 3 ~k~VlViGaG~iG~~ia~~L~~~G--~~V~v~~R~~~~a~~la~~~------~~~~---~~~~Dv~d~~~l~~~l~~~Dv 71 (450)
T 1ff9_A 3 TKSVLMLGSGFVTRPTLDVLTDSG--IKVTVACRTLESAKKLSAGV------QHST---PISLDVNDDAALDAEVAKHDL 71 (450)
T ss_dssp CCEEEEECCSTTHHHHHHHHHTTT--CEEEEEESSHHHHHHTTTTC------TTEE---EEECCTTCHHHHHHHHTTSSE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCc--CEEEEEECCHHHHHHHHHhc------CCce---EEEeecCCHHHHHHHHcCCcE
Confidence 578999999999999999999988 89999999988776654321 1000 0000 11 34466788999
Q ss_pred EEEccChhh
Q 014700 203 CLHAMPVQF 211 (420)
Q Consensus 203 VIlaVp~~~ 211 (420)
||.++|...
T Consensus 72 VIn~a~~~~ 80 (450)
T 1ff9_A 72 VISLIPYTF 80 (450)
T ss_dssp EEECCC--C
T ss_pred EEECCcccc
Confidence 999999643
No 297
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=97.07 E-value=0.0019 Score=58.47 Aligned_cols=69 Identities=23% Similarity=0.311 Sum_probs=49.4
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCC-CCCCCCceEEeCCHHHhccCCcEEEE
Q 014700 128 NKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFP-EQKLPENVIATTDAKTALLGADYCLH 205 (420)
Q Consensus 128 mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~-~~~l~~~i~a~td~~eal~~aDiVIl 205 (420)
|||.|.|+ |.+|..++..|++.| ++|++++|+++..+.+...+. .++. ++.-+ +. +++.++|+||.
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~--~~~~~D~~d~-------~~-~~~~~~d~vi~ 68 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRG--HEVLAVVRDPQKAADRLGATV--ATLVKEPLVL-------TE-ADLDSVDAVVD 68 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHTCTTS--EEEECCGGGC-------CH-HHHTTCSEEEE
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCC--CEEEEEEecccccccccCCCc--eEEecccccc-------cH-hhcccCCEEEE
Confidence 68999997 999999999999998 999999999887665533221 1110 00000 11 55789999998
Q ss_pred ccC
Q 014700 206 AMP 208 (420)
Q Consensus 206 aVp 208 (420)
+..
T Consensus 69 ~ag 71 (224)
T 3h2s_A 69 ALS 71 (224)
T ss_dssp CCC
T ss_pred CCc
Confidence 874
No 298
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=97.05 E-value=0.00048 Score=67.55 Aligned_cols=97 Identities=8% Similarity=0.060 Sum_probs=61.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEE-EEeCCH-HHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhcc--CCcE
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDP-AVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GADY 202 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~-l~~r~~-~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~--~aDi 202 (420)
++||+|||+|.+|...+..| ..+ .+|. ++++++ +..+++.+.... + .+ ...+++|.++++. +.|+
T Consensus 2 ~~rvgiiG~G~~~~~~~~~l-~~~--~~lvav~d~~~~~~~~~~~~~~~~--~----~~--~~~~~~~~~~ll~~~~vD~ 70 (337)
T 3ip3_A 2 SLKICVIGSSGHFRYALEGL-DEE--CSITGIAPGVPEEDLSKLEKAISE--M----NI--KPKKYNNWWEMLEKEKPDI 70 (337)
T ss_dssp CEEEEEECSSSCHHHHHTTC-CTT--EEEEEEECSSTTCCCHHHHHHHHT--T----TC--CCEECSSHHHHHHHHCCSE
T ss_pred ceEEEEEccchhHHHHHHhc-CCC--cEEEEEecCCchhhHHHHHHHHHH--c----CC--CCcccCCHHHHhcCCCCCE
Confidence 57999999999988777777 444 6766 577776 233333321000 0 00 1256678988875 5899
Q ss_pred EEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCCc
Q 014700 203 CLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLEL 238 (420)
Q Consensus 203 VIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~ 238 (420)
|++|+|.....+++..... .++-|+ +-|.+..
T Consensus 71 V~I~tp~~~H~~~~~~al~---aGkhVl-~EKPla~ 102 (337)
T 3ip3_A 71 LVINTVFSLNGKILLEALE---RKIHAF-VEKPIAT 102 (337)
T ss_dssp EEECSSHHHHHHHHHHHHH---TTCEEE-ECSSSCS
T ss_pred EEEeCCcchHHHHHHHHHH---CCCcEE-EeCCCCC
Confidence 9999998877666655443 355444 5676654
No 299
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=97.05 E-value=0.0013 Score=60.43 Aligned_cols=71 Identities=17% Similarity=0.254 Sum_probs=54.4
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcC-CCCCCCCCCCCCceEEeCCHHHhccCCcEEE
Q 014700 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHC-NCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (420)
Q Consensus 127 ~mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~-~~~~l~~~~l~~~i~a~td~~eal~~aDiVI 204 (420)
.|||.|.|+ |.+|.+++..|++.| ++|++++|+++..+.+...+. .. +..++. .++.++++++|+||
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G--~~V~~~~R~~~~~~~~~~~~~~~~-~~~Dl~--------~~~~~~~~~~D~vi 89 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKG--HEPVAMVRNEEQGPELRERGASDI-VVANLE--------EDFSHAFASIDAVV 89 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESSGGGHHHHHHTTCSEE-EECCTT--------SCCGGGGTTCSEEE
T ss_pred CCeEEEECCCChHHHHHHHHHHhCC--CeEEEEECChHHHHHHHhCCCceE-EEcccH--------HHHHHHHcCCCEEE
Confidence 689999997 999999999999998 999999999988777765432 11 011111 35567788999999
Q ss_pred EccC
Q 014700 205 HAMP 208 (420)
Q Consensus 205 laVp 208 (420)
.+..
T Consensus 90 ~~ag 93 (236)
T 3e8x_A 90 FAAG 93 (236)
T ss_dssp ECCC
T ss_pred ECCC
Confidence 8865
No 300
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=97.04 E-value=0.0008 Score=64.89 Aligned_cols=91 Identities=20% Similarity=0.256 Sum_probs=61.7
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEE
Q 014700 126 RTNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (420)
Q Consensus 126 ~~mkI~IIGaGamG~alA~~La~aG~~~-~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVI 204 (420)
..+++.|||+|.+|.+++..|.+.| . +|++++|+.++++.+.+.- ......++++ + ++|+||
T Consensus 121 ~~k~vlvlGaGGaaraia~~L~~~G--~~~v~v~nRt~~ka~~La~~~-------------~~~~~~~l~~-l-~~DivI 183 (282)
T 3fbt_A 121 KNNICVVLGSGGAARAVLQYLKDNF--AKDIYVVTRNPEKTSEIYGEF-------------KVISYDELSN-L-KGDVII 183 (282)
T ss_dssp TTSEEEEECSSTTHHHHHHHHHHTT--CSEEEEEESCHHHHHHHCTTS-------------EEEEHHHHTT-C-CCSEEE
T ss_pred cCCEEEEECCcHHHHHHHHHHHHcC--CCEEEEEeCCHHHHHHHHHhc-------------CcccHHHHHh-c-cCCEEE
Confidence 3579999999999999999999988 5 8999999999887776521 1122234444 5 899999
Q ss_pred EccChhhHHHH--HHHhhhcCCCCCeEEEec
Q 014700 205 HAMPVQFSSSF--LEGISDYVDPGLPFISLS 233 (420)
Q Consensus 205 laVp~~~l~~v--l~~i~~~l~~~~iVVs~s 233 (420)
-|+|..-.... ..--...++++.+|+.+.
T Consensus 184 naTp~Gm~~~~~~~pi~~~~l~~~~~v~Dlv 214 (282)
T 3fbt_A 184 NCTPKGMYPKEGESPVDKEVVAKFSSAVDLI 214 (282)
T ss_dssp ECSSTTSTTSTTCCSSCHHHHTTCSEEEESC
T ss_pred ECCccCccCCCccCCCCHHHcCCCCEEEEEe
Confidence 99985211000 000112345677777775
No 301
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=96.98 E-value=0.0025 Score=57.29 Aligned_cols=70 Identities=14% Similarity=0.246 Sum_probs=48.9
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEc
Q 014700 128 NKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (420)
Q Consensus 128 mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIla 206 (420)
|||.|+|+ |.+|.+++..|++.| ++|++++|+++..+.+. .+. .++.. . ..+...+++.++|+||.+
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~-~~~--~~~~~-----D--~~d~~~~~~~~~d~vi~~ 68 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRG--HEVTAIVRNAGKITQTH-KDI--NILQK-----D--IFDLTLSDLSDQNVVVDA 68 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCSHHHHHHC-SSS--EEEEC-----C--GGGCCHHHHTTCSEEEEC
T ss_pred CeEEEEcCCchhHHHHHHHHHhCC--CEEEEEEcCchhhhhcc-CCC--eEEec-----c--ccChhhhhhcCCCEEEEC
Confidence 79999995 999999999999998 99999999987665543 111 11100 0 000001567889999998
Q ss_pred cCh
Q 014700 207 MPV 209 (420)
Q Consensus 207 Vp~ 209 (420)
...
T Consensus 69 ag~ 71 (221)
T 3ew7_A 69 YGI 71 (221)
T ss_dssp CCS
T ss_pred CcC
Confidence 753
No 302
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=96.98 E-value=0.0016 Score=64.43 Aligned_cols=91 Identities=15% Similarity=0.244 Sum_probs=55.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHHh-cCCCCCCC---CCCC-CCceEEeCCHHHhccCC
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEK-HCNCRYFP---EQKL-PENVIATTDAKTALLGA 200 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~-l~~r~~~~~~~i~~~-g~~~~~l~---~~~l-~~~i~a~td~~eal~~a 200 (420)
++||+|+|+|.||..+++.|.+.. +.+|. +.+++.+....+... +.. .+.+ ...+ ..++.+..++++...++
T Consensus 1 ~ikVgIiGaG~iG~~~~r~L~~~p-~~elvav~d~~~~~~~~~a~~~g~~-~~~~~~~~~~~~~~~v~v~~~~e~l~~~v 78 (340)
T 1b7g_O 1 MVNVAVNGYGTIGKRVADAIIKQP-DMKLVGVAKTSPNYEAFIAHRRGIR-IYVPQQSIKKFEESGIPVAGTVEDLIKTS 78 (340)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCT-TEEEEEEECSSCSHHHHHHHHTTCC-EECCGGGHHHHHTTTCCCCCCHHHHHHHC
T ss_pred CeEEEEEecCHHHHHHHHHHHcCC-CCEEEEEEcCChHHHHHHHHhcCcc-eecCcCHHHHhcccccccccCHhHhhcCC
Confidence 359999999999999999998764 35665 456665444333332 211 1100 0000 11233344666655689
Q ss_pred cEEEEccChhhHHHHHHHh
Q 014700 201 DYCLHAMPVQFSSSFLEGI 219 (420)
Q Consensus 201 DiVIlaVp~~~l~~vl~~i 219 (420)
|+||.|+|.....+..+..
T Consensus 79 DvV~~aTp~~~s~~~a~~~ 97 (340)
T 1b7g_O 79 DIVVDTTPNGVGAQYKPIY 97 (340)
T ss_dssp SEEEECCSTTHHHHHHHHH
T ss_pred CEEEECCCCchhHHHHHHH
Confidence 9999999987766555443
No 303
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=96.97 E-value=0.0016 Score=63.67 Aligned_cols=72 Identities=25% Similarity=0.389 Sum_probs=50.5
Q ss_pred cCCCeEEEEcc-cHHHHHHHHHHHhcCCCC-------eEEEEeCCH--HHHH----HHHHhcCCCCCCCCCCCCCceEEe
Q 014700 125 ERTNKVVVLGG-GSFGTAMAAHVANKKSQL-------KVYMLMRDP--AVCQ----SINEKHCNCRYFPEQKLPENVIAT 190 (420)
Q Consensus 125 ~~~mkI~IIGa-GamG~alA~~La~aG~~~-------~V~l~~r~~--~~~~----~i~~~g~~~~~l~~~~l~~~i~a~ 190 (420)
...|||.|+|+ |.+|+.++..|...| + +|.++|+.+ +..+ .+.. .. ..+...+...
T Consensus 2 ~~~mkVlVtGaaGfIG~~l~~~L~~~g--~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~--~~------~~~~~di~~~ 71 (327)
T 1y7t_A 2 KAPVRVAVTGAAGQIGYSLLFRIAAGE--MLGKDQPVILQLLEIPQAMKALEGVVMELED--CA------FPLLAGLEAT 71 (327)
T ss_dssp CCCEEEEESSTTSHHHHHHHHHHHTTT--TTCTTCCEEEEEECCGGGHHHHHHHHHHHHT--TT------CTTEEEEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCC--CCCCCCCCEEEEEeCCCchhhccchhhhhhc--cc------ccccCCeEec
Confidence 34579999997 999999999999887 4 899999874 2222 2211 10 1111235555
Q ss_pred CCHHHhccCCcEEEEc
Q 014700 191 TDAKTALLGADYCLHA 206 (420)
Q Consensus 191 td~~eal~~aDiVIla 206 (420)
++..++++++|+||.+
T Consensus 72 ~~~~~a~~~~D~Vih~ 87 (327)
T 1y7t_A 72 DDPKVAFKDADYALLV 87 (327)
T ss_dssp SCHHHHTTTCSEEEEC
T ss_pred cChHHHhCCCCEEEEC
Confidence 6778889999999986
No 304
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=96.96 E-value=0.0069 Score=58.93 Aligned_cols=94 Identities=16% Similarity=0.138 Sum_probs=67.7
Q ss_pred CCCeEEEE-cc-cHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhcc--CCc
Q 014700 126 RTNKVVVL-GG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GAD 201 (420)
Q Consensus 126 ~~mkI~II-Ga-GamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~--~aD 201 (420)
+.++|+|| |+ |.+|...+..|.+.| ++ .++..++... +. + ..++.+..+++|+.+ +.|
T Consensus 12 ~~~siaVV~Gasg~~G~~~~~~l~~~G--~~-~v~~VnP~~~------g~--~-------i~G~~vy~sl~el~~~~~vD 73 (305)
T 2fp4_A 12 DKNTKVICQGFTGKQGTFHSQQALEYG--TN-LVGGTTPGKG------GK--T-------HLGLPVFNTVKEAKEQTGAT 73 (305)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHT--CE-EEEEECTTCT------TC--E-------ETTEEEESSHHHHHHHHCCC
T ss_pred CCCcEEEEECCCCCHHHHHHHHHHHCC--Cc-EEEEeCCCcC------cc--e-------ECCeeeechHHHhhhcCCCC
Confidence 45678888 98 999999999999988 77 3455554310 00 0 014667778888777 899
Q ss_pred EEEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCCcc
Q 014700 202 YCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELN 239 (420)
Q Consensus 202 iVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~~ 239 (420)
++++++|.....++++++... . =..+|.++.|+..+
T Consensus 74 ~avI~vP~~~~~~~~~e~i~~-G-i~~iv~~t~G~~~~ 109 (305)
T 2fp4_A 74 ASVIYVPPPFAAAAINEAIDA-E-VPLVVCITEGIPQQ 109 (305)
T ss_dssp EEEECCCHHHHHHHHHHHHHT-T-CSEEEECCCCCCHH
T ss_pred EEEEecCHHHHHHHHHHHHHC-C-CCEEEEECCCCChH
Confidence 999999999999988887653 1 13556678888643
No 305
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.94 E-value=0.0053 Score=57.08 Aligned_cols=81 Identities=17% Similarity=0.163 Sum_probs=55.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCH-HHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEE
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP-AVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~-~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIl 205 (420)
.++|.|||+|.+|..-+..|.++| .+|++++++. +.++.+.+.+. ..... .. -+. +.+.++|+||.
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~G--A~VtVvap~~~~~l~~l~~~~~-i~~i~-----~~----~~~-~dL~~adLVIa 97 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEG--AAITVVAPTVSAEINEWEAKGQ-LRVKR-----KK----VGE-EDLLNVFFIVV 97 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGC--CCEEEECSSCCHHHHHHHHTTS-CEEEC-----SC----CCG-GGSSSCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC--CEEEEECCCCCHHHHHHHHcCC-cEEEE-----CC----CCH-hHhCCCCEEEE
Confidence 579999999999999999999998 8999998764 23455554331 11100 00 022 23788999999
Q ss_pred ccChhhHHHHHHHhh
Q 014700 206 AMPVQFSSSFLEGIS 220 (420)
Q Consensus 206 aVp~~~l~~vl~~i~ 220 (420)
|+....+...+....
T Consensus 98 AT~d~~~N~~I~~~a 112 (223)
T 3dfz_A 98 ATNDQAVNKFVKQHI 112 (223)
T ss_dssp CCCCTHHHHHHHHHS
T ss_pred CCCCHHHHHHHHHHH
Confidence 998777655554443
No 306
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=96.88 E-value=0.0013 Score=69.49 Aligned_cols=35 Identities=20% Similarity=0.342 Sum_probs=31.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCH
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~ 162 (420)
..||.|||+|.+|+.+|..|+.+|. -+++++|.+.
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~aGV-G~ItLvD~D~ 360 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAWGV-RKITFVDNGT 360 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCC-CEEEEEcCCC
Confidence 4699999999999999999999995 5899998864
No 307
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=96.84 E-value=0.001 Score=63.66 Aligned_cols=74 Identities=16% Similarity=0.222 Sum_probs=58.5
Q ss_pred cCCCeEEEEcccH-HHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEE
Q 014700 125 ERTNKVVVLGGGS-FGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (420)
Q Consensus 125 ~~~mkI~IIGaGa-mG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiV 203 (420)
-..+++.|||.|. +|..+|..|.+.| .+|+++.+.. .++++.++.||+|
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~g--AtVtv~~~~t----------------------------~~L~~~~~~ADIV 197 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRN--YTVSVCHSKT----------------------------KDIGSMTRSSKIV 197 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTT--CEEEEECTTC----------------------------SCHHHHHHHSSEE
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCC--CeEEEEeCCc----------------------------ccHHHhhccCCEE
Confidence 3468999999985 8999999999988 8999987531 2677888999999
Q ss_pred EEccChhhHHHHHHHhhhcCCCCCeEEEec
Q 014700 204 LHAMPVQFSSSFLEGISDYVDPGLPFISLS 233 (420)
Q Consensus 204 IlaVp~~~l~~vl~~i~~~l~~~~iVVs~s 233 (420)
|.+++...+ +. ..+++++++||++.
T Consensus 198 I~Avg~p~~---I~--~~~vk~GavVIDvg 222 (276)
T 3ngx_A 198 VVAVGRPGF---LN--REMVTPGSVVIDVG 222 (276)
T ss_dssp EECSSCTTC---BC--GGGCCTTCEEEECC
T ss_pred EECCCCCcc---cc--HhhccCCcEEEEec
Confidence 999986432 11 35678999999874
No 308
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=96.84 E-value=0.0014 Score=64.12 Aligned_cols=96 Identities=10% Similarity=0.064 Sum_probs=61.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHh-ccCCcEEEE
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTA-LLGADYCLH 205 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~ea-l~~aDiVIl 205 (420)
.++|.|+|+|.+|..++..|.+.| + |++++++++.++ +.+.+.... ..+..- ...++++ +++||.+++
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g--~-v~vid~~~~~~~-~~~~~~~~i-~gd~~~------~~~L~~a~i~~a~~vi~ 183 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSE--V-FVLAEDENVRKK-VLRSGANFV-HGDPTR------VSDLEKANVRGARAVIV 183 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSC--E-EEEESCGGGHHH-HHHTTCEEE-ESCTTS------HHHHHHTCSTTEEEEEE
T ss_pred cCCEEEECCcHHHHHHHHHHHhCC--c-EEEEeCChhhhh-HHhCCcEEE-EeCCCC------HHHHHhcChhhccEEEE
Confidence 468999999999999999999988 8 999999999888 765432110 000000 0123334 678999999
Q ss_pred ccChhhHHHHHHHhhhcCCCCCeEEEec
Q 014700 206 AMPVQFSSSFLEGISDYVDPGLPFISLS 233 (420)
Q Consensus 206 aVp~~~l~~vl~~i~~~l~~~~iVVs~s 233 (420)
+++++...-.+-.....+.++..++.-.
T Consensus 184 ~~~~d~~n~~~~~~ar~~~~~~~iiar~ 211 (336)
T 1lnq_A 184 DLESDSETIHCILGIRKIDESVRIIAEA 211 (336)
T ss_dssp CCSSHHHHHHHHHHHHTTCTTSEEEEEC
T ss_pred cCCccHHHHHHHHHHHHHCCCCeEEEEE
Confidence 9997643322323334445554454443
No 309
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=96.81 E-value=0.0014 Score=62.01 Aligned_cols=84 Identities=8% Similarity=0.156 Sum_probs=60.5
Q ss_pred cCCCeEEEEcccHHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEE
Q 014700 125 ERTNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (420)
Q Consensus 125 ~~~mkI~IIGaGamG~alA~~La~aG~~~~V~-l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiV 203 (420)
.+.|||+++|.|+||..+++. . + .++. +|+ +++ + .+ ++.+++|+++.+.++|+|
T Consensus 10 ~~~~rV~i~G~GaIG~~v~~~--~-~--leLv~v~~---~k~------g---------el--gv~a~~d~d~lla~pD~V 64 (253)
T 1j5p_A 10 HHHMTVLIIGMGNIGKKLVEL--G-N--FEKIYAYD---RIS------K---------DI--PGVVRLDEFQVPSDVSTV 64 (253)
T ss_dssp -CCCEEEEECCSHHHHHHHHH--S-C--CSEEEEEC---SSC------C---------CC--SSSEECSSCCCCTTCCEE
T ss_pred cccceEEEECcCHHHHHHHhc--C-C--cEEEEEEe---ccc------c---------cc--CceeeCCHHHHhhCCCEE
Confidence 457999999999999999998 3 5 6665 555 211 1 01 345677888888899999
Q ss_pred EEccChhhHHHHHHHhhhcCCCCCeEEEeccCC
Q 014700 204 LHAMPVQFSSSFLEGISDYVDPGLPFISLSKGL 236 (420)
Q Consensus 204 IlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi 236 (420)
+-|-....+++.+. +.|..+.-+|.++-|.
T Consensus 65 Ve~A~~~av~e~~~---~iL~aG~dvv~~S~ga 94 (253)
T 1j5p_A 65 VECASPEAVKEYSL---QILKNPVNYIIISTSA 94 (253)
T ss_dssp EECSCHHHHHHHHH---HHTTSSSEEEECCGGG
T ss_pred EECCCHHHHHHHHH---HHHHCCCCEEEcChhh
Confidence 99998877766444 4456788888777664
No 310
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=96.77 E-value=0.0017 Score=59.97 Aligned_cols=82 Identities=13% Similarity=0.180 Sum_probs=55.1
Q ss_pred CCCeEEEEcccHHHHHHHHHHH--hcCCCCeEE-EEeCCHH-HHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhcc--C
Q 014700 126 RTNKVVVLGGGSFGTAMAAHVA--NKKSQLKVY-MLMRDPA-VCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--G 199 (420)
Q Consensus 126 ~~mkI~IIGaGamG~alA~~La--~aG~~~~V~-l~~r~~~-~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~--~ 199 (420)
...+|+|+|+|++|.+++..+. ..| +++. ++|.+++ +. |. ..+.+. .+...+++++.++ +
T Consensus 83 ~~~~V~IvGaG~lG~aLa~~~~~~~~g--~~iVg~~D~dp~~ki------G~--~~i~Gv----pV~~~~dL~~~v~~~~ 148 (212)
T 3keo_A 83 STTNVMLVGCGNIGRALLHYRFHDRNK--MQISMAFDLDSNDLV------GK--TTEDGI----PVYGISTINDHLIDSD 148 (212)
T ss_dssp SCEEEEEECCSHHHHHHTTCCCCTTSS--EEEEEEEECTTSTTT------TC--BCTTCC----BEEEGGGHHHHC-CCS
T ss_pred CCCEEEEECcCHHHHHHHHhhhcccCC--eEEEEEEeCCchhcc------Cc--eeECCe----EEeCHHHHHHHHHHcC
Confidence 3468999999999999999842 333 6665 5687775 31 11 011111 2334567777776 4
Q ss_pred CcEEEEccChhhHHHHHHHhhh
Q 014700 200 ADYCLHAMPVQFSSSFLEGISD 221 (420)
Q Consensus 200 aDiVIlaVp~~~l~~vl~~i~~ 221 (420)
.|++|+|+|+...+++++.+..
T Consensus 149 Id~vIIAvPs~~aq~v~d~lv~ 170 (212)
T 3keo_A 149 IETAILTVPSTEAQEVADILVK 170 (212)
T ss_dssp CCEEEECSCGGGHHHHHHHHHH
T ss_pred CCEEEEecCchhHHHHHHHHHH
Confidence 8999999999887788877654
No 311
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=96.77 E-value=0.0035 Score=61.30 Aligned_cols=67 Identities=15% Similarity=0.094 Sum_probs=48.4
Q ss_pred CCCeEEEEcccHHHHH-HHHHHHhcCCCCeEEEEeCCH--HHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhc-cCCc
Q 014700 126 RTNKVVVLGGGSFGTA-MAAHVANKKSQLKVYMLMRDP--AVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL-LGAD 201 (420)
Q Consensus 126 ~~mkI~IIGaGamG~a-lA~~La~aG~~~~V~l~~r~~--~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal-~~aD 201 (420)
.+|||.|||.|.+|.+ +|..|.+.| ++|+++|+.+ ...+.+.+.|.. +..-.++++.. .++|
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~G--~~V~~~D~~~~~~~~~~L~~~gi~------------v~~g~~~~~l~~~~~d 68 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEAG--FEVSGCDAKMYPPMSTQLEALGID------------VYEGFDAAQLDEFKAD 68 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHTT--CEEEEEESSCCTTHHHHHHHTTCE------------EEESCCGGGGGSCCCS
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhCC--CEEEEEcCCCCcHHHHHHHhCCCE------------EECCCCHHHcCCCCCC
Confidence 3689999999999995 999999998 9999999864 345566665531 11112444433 4799
Q ss_pred EEEEc
Q 014700 202 YCLHA 206 (420)
Q Consensus 202 iVIla 206 (420)
+||++
T Consensus 69 ~vV~S 73 (326)
T 3eag_A 69 VYVIG 73 (326)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99985
No 312
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=96.73 E-value=0.0025 Score=62.33 Aligned_cols=98 Identities=16% Similarity=0.131 Sum_probs=63.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCC---HHHHHHHHHhcCCCCCCCCCCCCCceEE--eCC---HHHhc
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRD---PAVCQSINEKHCNCRYFPEQKLPENVIA--TTD---AKTAL 197 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~-~V~l~~r~---~~~~~~i~~~g~~~~~l~~~~l~~~i~a--~td---~~eal 197 (420)
.+++.|+|+|.+|.+++..|++.| . +|++++|+ .++++++.+.-.. . . ...+.+ .++ +.+.+
T Consensus 154 gk~~lVlGaGG~g~aia~~L~~~G--a~~V~i~nR~~~~~~~a~~la~~~~~-~-~-----~~~~~~~~~~~~~~l~~~l 224 (315)
T 3tnl_A 154 GKKMTICGAGGAATAICIQAALDG--VKEISIFNRKDDFYANAEKTVEKINS-K-T-----DCKAQLFDIEDHEQLRKEI 224 (315)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTT--CSEEEEEECSSTTHHHHHHHHHHHHH-H-S-----SCEEEEEETTCHHHHHHHH
T ss_pred CCEEEEECCChHHHHHHHHHHHCC--CCEEEEEECCCchHHHHHHHHHHhhh-h-c-----CCceEEeccchHHHHHhhh
Confidence 579999999999999999999998 6 89999999 7777766543100 0 0 001222 123 34556
Q ss_pred cCCcEEEEccChhhHHH--HHHH-hhhcCCCCCeEEEec
Q 014700 198 LGADYCLHAMPVQFSSS--FLEG-ISDYVDPGLPFISLS 233 (420)
Q Consensus 198 ~~aDiVIlaVp~~~l~~--vl~~-i~~~l~~~~iVVs~s 233 (420)
.++|+||-|+|..-... ...- ....++++.+|+.+.
T Consensus 225 ~~aDiIINaTp~Gm~~~~~~~p~~~~~~l~~~~~V~Dlv 263 (315)
T 3tnl_A 225 AESVIFTNATGVGMKPFEGETLLPSADMLRPELIVSDVV 263 (315)
T ss_dssp HTCSEEEECSSTTSTTSTTCCSCCCGGGCCTTCEEEESC
T ss_pred cCCCEEEECccCCCCCCCCCCCCCcHHHcCCCCEEEEec
Confidence 78999999999532110 0000 123456677777765
No 313
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=96.73 E-value=0.00059 Score=62.09 Aligned_cols=76 Identities=24% Similarity=0.379 Sum_probs=49.1
Q ss_pred hcCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcE
Q 014700 124 LERTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADY 202 (420)
Q Consensus 124 ~~~~mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDi 202 (420)
|+.||||.|.|+ |.+|..++..|.+.| ++|++++|+++..+.+.. ...++. ..+.-..+++++++++|+
T Consensus 1 M~~m~~ilItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~---~~~~~~-----~Dl~d~~~~~~~~~~~d~ 70 (227)
T 3dhn_A 1 MEKVKKIVLIGASGFVGSALLNEALNRG--FEVTAVVRHPEKIKIENE---HLKVKK-----ADVSSLDEVCEVCKGADA 70 (227)
T ss_dssp --CCCEEEEETCCHHHHHHHHHHHHTTT--CEEEEECSCGGGCCCCCT---TEEEEC-----CCTTCHHHHHHHHTTCSE
T ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEEcCcccchhccC---ceEEEE-----ecCCCHHHHHHHhcCCCE
Confidence 345789999995 999999999999998 999999998764221100 000000 000001134456788999
Q ss_pred EEEccCh
Q 014700 203 CLHAMPV 209 (420)
Q Consensus 203 VIlaVp~ 209 (420)
||.+...
T Consensus 71 vi~~a~~ 77 (227)
T 3dhn_A 71 VISAFNP 77 (227)
T ss_dssp EEECCCC
T ss_pred EEEeCcC
Confidence 9998753
No 314
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=96.71 E-value=0.0019 Score=62.19 Aligned_cols=73 Identities=22% Similarity=0.234 Sum_probs=57.9
Q ss_pred CCCeEEEEcccH-HHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEE
Q 014700 126 RTNKVVVLGGGS-FGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (420)
Q Consensus 126 ~~mkI~IIGaGa-mG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVI 204 (420)
..+++.|||.|. +|.++|..|...| ..|++..+.. .++++.++.||+||
T Consensus 159 ~Gk~vvVvGrs~iVG~p~A~lL~~~g--AtVtv~h~~t----------------------------~~L~~~~~~ADIVI 208 (285)
T 3p2o_A 159 EGKDAVIIGASNIVGRPMATMLLNAG--ATVSVCHIKT----------------------------KDLSLYTRQADLII 208 (285)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHHTT--CEEEEECTTC----------------------------SCHHHHHTTCSEEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCC--CeEEEEeCCc----------------------------hhHHHHhhcCCEEE
Confidence 468999999887 7999999999988 8999987531 16778899999999
Q ss_pred EccChhhHHHHHHHhhhcCCCCCeEEEec
Q 014700 205 HAMPVQFSSSFLEGISDYVDPGLPFISLS 233 (420)
Q Consensus 205 laVp~~~l~~vl~~i~~~l~~~~iVVs~s 233 (420)
.+++...+ + -..+++++++||++.
T Consensus 209 ~Avg~p~~---I--~~~~vk~GavVIDVg 232 (285)
T 3p2o_A 209 VAAGCVNL---L--RSDMVKEGVIVVDVG 232 (285)
T ss_dssp ECSSCTTC---B--CGGGSCTTEEEEECC
T ss_pred ECCCCCCc---C--CHHHcCCCeEEEEec
Confidence 99985432 1 135678899998873
No 315
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=96.70 E-value=0.0016 Score=54.92 Aligned_cols=87 Identities=14% Similarity=0.086 Sum_probs=62.9
Q ss_pred CCeEEEEcc----cHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcE
Q 014700 127 TNKVVVLGG----GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADY 202 (420)
Q Consensus 127 ~mkI~IIGa----GamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDi 202 (420)
.++|+|||+ +.+|..+...|.+.| ++|+.++...+. + .+..+..++++.-. .|+
T Consensus 4 p~siAVVGaS~~~~~~g~~v~~~L~~~g--~~V~pVnP~~~~---i----------------~G~~~y~sl~dlp~-vDl 61 (122)
T 3ff4_A 4 MKKTLILGATPETNRYAYLAAERLKSHG--HEFIPVGRKKGE---V----------------LGKTIINERPVIEG-VDT 61 (122)
T ss_dssp CCCEEEETCCSCTTSHHHHHHHHHHHHT--CCEEEESSSCSE---E----------------TTEECBCSCCCCTT-CCE
T ss_pred CCEEEEEccCCCCCCHHHHHHHHHHHCC--CeEEEECCCCCc---C----------------CCeeccCChHHCCC-CCE
Confidence 578999998 679999999999998 888887764321 1 12344456666434 899
Q ss_pred EEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCCc
Q 014700 203 CLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLEL 238 (420)
Q Consensus 203 VIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~ 238 (420)
+++++|...+.++++++... .... |.++.|+..
T Consensus 62 avi~~p~~~v~~~v~e~~~~-g~k~--v~~~~G~~~ 94 (122)
T 3ff4_A 62 VTLYINPQNQLSEYNYILSL-KPKR--VIFNPGTEN 94 (122)
T ss_dssp EEECSCHHHHGGGHHHHHHH-CCSE--EEECTTCCC
T ss_pred EEEEeCHHHHHHHHHHHHhc-CCCE--EEECCCCCh
Confidence 99999999999999887654 2222 346778864
No 316
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=96.69 E-value=0.0016 Score=63.21 Aligned_cols=73 Identities=19% Similarity=0.315 Sum_probs=57.1
Q ss_pred CCCeEEEEcccH-HHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHH--HhccCCcE
Q 014700 126 RTNKVVVLGGGS-FGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAK--TALLGADY 202 (420)
Q Consensus 126 ~~mkI~IIGaGa-mG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~--eal~~aDi 202 (420)
..+++.|||.|. +|.++|..|.+.| .+|+++++... +++ +.++.||+
T Consensus 164 ~Gk~vvVIG~s~iVG~p~A~lL~~~g--AtVtv~~~~T~----------------------------~l~l~~~~~~ADI 213 (300)
T 4a26_A 164 AGKRAVVLGRSNIVGAPVAALLMKEN--ATVTIVHSGTS----------------------------TEDMIDYLRTADI 213 (300)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHHTT--CEEEEECTTSC----------------------------HHHHHHHHHTCSE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCC--CeEEEEeCCCC----------------------------CchhhhhhccCCE
Confidence 468999999877 7999999999988 89999987321 344 67889999
Q ss_pred EEEccChhhHHHHHHHhhhcCCCCCeEEEec
Q 014700 203 CLHAMPVQFSSSFLEGISDYVDPGLPFISLS 233 (420)
Q Consensus 203 VIlaVp~~~l~~vl~~i~~~l~~~~iVVs~s 233 (420)
||.+++...+ +. ..+++++++||++.
T Consensus 214 VI~Avg~p~~---I~--~~~vk~GavVIDvg 239 (300)
T 4a26_A 214 VIAAMGQPGY---VK--GEWIKEGAAVVDVG 239 (300)
T ss_dssp EEECSCCTTC---BC--GGGSCTTCEEEECC
T ss_pred EEECCCCCCC---Cc--HHhcCCCcEEEEEe
Confidence 9999996432 11 35678999999874
No 317
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=96.69 E-value=0.0022 Score=61.74 Aligned_cols=73 Identities=25% Similarity=0.250 Sum_probs=57.6
Q ss_pred CCCeEEEEcccH-HHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEE
Q 014700 126 RTNKVVVLGGGS-FGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (420)
Q Consensus 126 ~~mkI~IIGaGa-mG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVI 204 (420)
..+++.|||.|. +|..+|..|...| ..|++..+.. .++++.++.||+||
T Consensus 160 ~Gk~vvVIG~s~iVG~p~A~lL~~~g--AtVtv~hs~t----------------------------~~L~~~~~~ADIVI 209 (285)
T 3l07_A 160 EGAYAVVVGASNVVGKPVSQLLLNAK--ATVTTCHRFT----------------------------TDLKSHTTKADILI 209 (285)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHHTT--CEEEEECTTC----------------------------SSHHHHHTTCSEEE
T ss_pred CCCEEEEECCCchhHHHHHHHHHHCC--CeEEEEeCCc----------------------------hhHHHhcccCCEEE
Confidence 468999999987 7999999999988 8999886531 16778899999999
Q ss_pred EccChhhHHHHHHHhhhcCCCCCeEEEec
Q 014700 205 HAMPVQFSSSFLEGISDYVDPGLPFISLS 233 (420)
Q Consensus 205 laVp~~~l~~vl~~i~~~l~~~~iVVs~s 233 (420)
.+++...+ + -..+++++++||++.
T Consensus 210 ~Avg~p~~---I--~~~~vk~GavVIDvg 233 (285)
T 3l07_A 210 VAVGKPNF---I--TADMVKEGAVVIDVG 233 (285)
T ss_dssp ECCCCTTC---B--CGGGSCTTCEEEECC
T ss_pred ECCCCCCC---C--CHHHcCCCcEEEEec
Confidence 99985432 1 135678899998873
No 318
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=96.69 E-value=0.0027 Score=60.97 Aligned_cols=73 Identities=25% Similarity=0.345 Sum_probs=57.3
Q ss_pred CCCeEEEEcccHH-HHHHHHHHHhc--CCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcE
Q 014700 126 RTNKVVVLGGGSF-GTAMAAHVANK--KSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADY 202 (420)
Q Consensus 126 ~~mkI~IIGaGam-G~alA~~La~a--G~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDi 202 (420)
..+++.|||.|.+ |..+|..|... | .+|++..+.. .++.+.++.||+
T Consensus 157 ~gk~vvVvG~s~iVG~p~A~lL~~~g~~--atVtv~h~~t----------------------------~~L~~~~~~ADI 206 (281)
T 2c2x_A 157 AGAHVVVIGRGVTVGRPLGLLLTRRSEN--ATVTLCHTGT----------------------------RDLPALTRQADI 206 (281)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHTSTTTC--CEEEEECTTC----------------------------SCHHHHHTTCSE
T ss_pred CCCEEEEECCCcHHHHHHHHHHhcCCCC--CEEEEEECch----------------------------hHHHHHHhhCCE
Confidence 3689999999975 99999999988 6 7999886432 267788899999
Q ss_pred EEEccChhhHHHHHHHhhhcCCCCCeEEEec
Q 014700 203 CLHAMPVQFSSSFLEGISDYVDPGLPFISLS 233 (420)
Q Consensus 203 VIlaVp~~~l~~vl~~i~~~l~~~~iVVs~s 233 (420)
||.+++...+ +. ..+++++.+||++.
T Consensus 207 VI~Avg~p~~---I~--~~~vk~GavVIDVg 232 (281)
T 2c2x_A 207 VVAAVGVAHL---LT--ADMVRPGAAVIDVG 232 (281)
T ss_dssp EEECSCCTTC---BC--GGGSCTTCEEEECC
T ss_pred EEECCCCCcc---cC--HHHcCCCcEEEEcc
Confidence 9999996542 11 34578899998874
No 319
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=96.68 E-value=0.0033 Score=60.89 Aligned_cols=73 Identities=15% Similarity=0.187 Sum_probs=58.2
Q ss_pred CCCeEEEEcccH-HHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEE
Q 014700 126 RTNKVVVLGGGS-FGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (420)
Q Consensus 126 ~~mkI~IIGaGa-mG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVI 204 (420)
..+++.|||.|. +|..+|..|...| ..|+++++.. .++++.++.||+||
T Consensus 164 ~gk~vvVIG~s~iVG~p~A~lL~~~g--AtVtv~hs~t----------------------------~~L~~~~~~ADIVI 213 (301)
T 1a4i_A 164 AGRHAVVVGRSKIVGAPMHDLLLWNN--ATVTTCHSKT----------------------------AHLDEEVNKGDILV 213 (301)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHHTT--CEEEEECTTC----------------------------SSHHHHHTTCSEEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCC--CeEEEEECCc----------------------------ccHHHHhccCCEEE
Confidence 368999999996 7999999999988 8999986431 26778899999999
Q ss_pred EccChhhHHHHHHHhhhcCCCCCeEEEec
Q 014700 205 HAMPVQFSSSFLEGISDYVDPGLPFISLS 233 (420)
Q Consensus 205 laVp~~~l~~vl~~i~~~l~~~~iVVs~s 233 (420)
.+++...+ +. ..+++++.+||++.
T Consensus 214 ~Avg~p~~---I~--~~~vk~GavVIDVg 237 (301)
T 1a4i_A 214 VATGQPEM---VK--GEWIKPGAIVIDCG 237 (301)
T ss_dssp ECCCCTTC---BC--GGGSCTTCEEEECC
T ss_pred ECCCCccc---CC--HHHcCCCcEEEEcc
Confidence 99997542 11 34578899999884
No 320
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=96.66 E-value=0.0022 Score=61.73 Aligned_cols=73 Identities=16% Similarity=0.188 Sum_probs=57.8
Q ss_pred CCCeEEEEcccH-HHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEE
Q 014700 126 RTNKVVVLGGGS-FGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (420)
Q Consensus 126 ~~mkI~IIGaGa-mG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVI 204 (420)
..+++.|||.|. +|..+|..|...| .+|+++++.. .++++.++.||+||
T Consensus 158 ~gk~vvVIG~s~iVG~p~A~lL~~~g--AtVtv~hs~t----------------------------~~L~~~~~~ADIVI 207 (288)
T 1b0a_A 158 FGLNAVVIGASNIVGRPMSMELLLAG--CTTTVTHRFT----------------------------KNLRHHVENADLLI 207 (288)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTTT--CEEEEECSSC----------------------------SCHHHHHHHCSEEE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHCC--CeEEEEeCCc----------------------------hhHHHHhccCCEEE
Confidence 368999999996 6999999999988 8999986432 26777789999999
Q ss_pred EccChhhHHHHHHHhhhcCCCCCeEEEec
Q 014700 205 HAMPVQFSSSFLEGISDYVDPGLPFISLS 233 (420)
Q Consensus 205 laVp~~~l~~vl~~i~~~l~~~~iVVs~s 233 (420)
.+++...+ +. ..+++++.+||++.
T Consensus 208 ~Avg~p~l---I~--~~~vk~GavVIDVg 231 (288)
T 1b0a_A 208 VAVGKPGF---IP--GDWIKEGAIVIDVG 231 (288)
T ss_dssp ECSCCTTC---BC--TTTSCTTCEEEECC
T ss_pred ECCCCcCc---CC--HHHcCCCcEEEEcc
Confidence 99996542 10 34578899999874
No 321
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=96.66 E-value=0.0039 Score=61.81 Aligned_cols=102 Identities=17% Similarity=0.237 Sum_probs=59.7
Q ss_pred cCCCeEEEEc-ccHHHHHHHHHHHhcCCCCeEEEEe-CCHHHHHHHHHhcCCCCCCCCCCCC---CceEEeC-CHHHhcc
Q 014700 125 ERTNKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLM-RDPAVCQSINEKHCNCRYFPEQKLP---ENVIATT-DAKTALL 198 (420)
Q Consensus 125 ~~~mkI~IIG-aGamG~alA~~La~aG~~~~V~l~~-r~~~~~~~i~~~g~~~~~l~~~~l~---~~i~a~t-d~~eal~ 198 (420)
+.++||+|+| .|.+|..+.+.|.+.. +.+|..+. .+....+.+.+.+.. +.+..++ ..+.+.+ ++++ +.
T Consensus 2 ~~~~kV~IiGAtG~iG~~llr~L~~~p-~~elvai~~s~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~d~~~-~~ 76 (350)
T 2ep5_A 2 ADKIKVSLLGSTGMVGQKMVKMLAKHP-YLELVKVSASPSKIGKKYKDAVKW---IEQGDIPEEVQDLPIVSTNYED-HK 76 (350)
T ss_dssp CCCEEEEEESCSSHHHHHHHHHHTTCS-SEEEEEEECCGGGTTSBHHHHCCC---CSSSSCCHHHHTCBEECSSGGG-GT
T ss_pred CCCcEEEEECcCCHHHHHHHHHHHhCC-CcEEEEEecChhhcCCCHHHhcCc---ccccccccCCceeEEeeCCHHH-hc
Confidence 3467999999 6999999999998754 35776664 222211122221110 0000000 0112221 4444 57
Q ss_pred CCcEEEEccChhhHHHHHHHhhhcCCCCCeEEEecc
Q 014700 199 GADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSK 234 (420)
Q Consensus 199 ~aDiVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~sn 234 (420)
++|+||+|+|.....++...... .+..||+.+.
T Consensus 77 ~vDvVf~atp~~~s~~~a~~~~~---aG~~VId~s~ 109 (350)
T 2ep5_A 77 DVDVVLSALPNELAESIELELVK---NGKIVVSNAS 109 (350)
T ss_dssp TCSEEEECCCHHHHHHHHHHHHH---TTCEEEECSS
T ss_pred CCCEEEECCChHHHHHHHHHHHH---CCCEEEECCc
Confidence 89999999998877776665543 4667888764
No 322
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=96.66 E-value=0.0032 Score=62.08 Aligned_cols=103 Identities=18% Similarity=0.247 Sum_probs=59.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHH-hcCCC-CCCCCC--CC-CCceEEeCCHHHhccCC
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINE-KHCNC-RYFPEQ--KL-PENVIATTDAKTALLGA 200 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~-l~~r~~~~~~~i~~-~g~~~-~~l~~~--~l-~~~i~a~td~~eal~~a 200 (420)
|+||+|+|+|.||..+++.|.+.. +.++. +.+++++...+... .+... ..+++. .+ ...+.+..++++.+.++
T Consensus 1 mikVgIiGaG~iG~~l~r~L~~~~-~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~~~~~~~~~~v 79 (337)
T 1cf2_P 1 MKAVAINGYGTVGKRVADAIAQQD-DMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEA 79 (337)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTSS-SEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTC
T ss_pred CeEEEEEeECHHHHHHHHHHHcCC-CcEEEEEEcCChhHHHHhcCCcchhhccccccceeeecCCceEEcCCHHHHhcCC
Confidence 469999999999999999998753 25654 35666444433332 21000 000000 00 01122223566666789
Q ss_pred cEEEEccChhhHHHHHHHhhhcCCCCCeEEEec
Q 014700 201 DYCLHAMPVQFSSSFLEGISDYVDPGLPFISLS 233 (420)
Q Consensus 201 DiVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~s 233 (420)
|+||.|+|.....+....... .+..||..+
T Consensus 80 DvV~~atp~~~~~~~a~~~l~---aG~~VId~s 109 (337)
T 1cf2_P 80 DIVIDCTPEGIGAKNLKMYKE---KGIKAIFQG 109 (337)
T ss_dssp SEEEECCSTTHHHHHHHHHHH---HTCCEEECT
T ss_pred CEEEECCCchhhHHHHHHHHH---cCCEEEEec
Confidence 999999998776666554433 244455443
No 323
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=96.60 E-value=0.013 Score=57.63 Aligned_cols=105 Identities=17% Similarity=0.141 Sum_probs=63.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEE-eC--CHHHHHHHHHhcCCCCCCCCC------CCC---CceEEe--CC
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYML-MR--DPAVCQSINEKHCNCRYFPEQ------KLP---ENVIAT--TD 192 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~-~r--~~~~~~~i~~~g~~~~~l~~~------~l~---~~i~a~--td 192 (420)
++||+|+|+|.+|..+++.|.+.. +.+|..+ ++ +.+.+..+.+.......+++. .+. ..+.+. .|
T Consensus 3 ~ikVgI~G~G~iGr~~~R~l~~~~-~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~~~~~~~~~~l~v~g~~i~v~~~~d 81 (335)
T 1u8f_O 3 KVKVGVNGFGRIGRLVTRAAFNSG-KVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERD 81 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHC-SSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSS
T ss_pred ceEEEEEccCHHHHHHHHHHHcCC-CcEEEEecCCCCCHHHHHHHhhcccccCCCCCceEEcCCeEEECCeEEEEEecCC
Confidence 469999999999999999998764 3676644 43 666666655421110011110 010 122223 36
Q ss_pred HHHhc---cCCcEEEEccChhhHHHHHHHhhhcCCCCCeEEEeccC
Q 014700 193 AKTAL---LGADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKG 235 (420)
Q Consensus 193 ~~eal---~~aDiVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snG 235 (420)
+++.. .++|+||.|+|.....+.... +++.|..+|.+++.
T Consensus 82 ~~~l~~~~~~vDvV~eatg~~~~~e~a~~---~l~aGak~V~iSap 124 (335)
T 1u8f_O 82 PSKIKWGDAGAEYVVESTGVFTTMEKAGA---HLQGGAKRVIISAP 124 (335)
T ss_dssp GGGCCTTTTTCCEEEECSSSCCSHHHHGG---GGGGTCSEEEESSC
T ss_pred HHHCccccCCCCEEEECCCchhhHHHHHH---HHhCCCeEEEeccC
Confidence 66641 479999999998776665543 44456555666643
No 324
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=96.60 E-value=0.0031 Score=62.74 Aligned_cols=98 Identities=18% Similarity=0.337 Sum_probs=59.4
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEE
Q 014700 126 RTNKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (420)
Q Consensus 126 ~~mkI~IIG-aGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVI 204 (420)
.++||+|+| .|.+|..+.+.|.+.. +.++..+....+....+...+.. +.+... ..+... + ++.+.++|+||
T Consensus 15 ~~~kV~IiGAtG~iG~~llr~L~~~p-~~elvai~~~~~~g~~~~~~~~~---~~~~v~-~dl~~~-~-~~~~~~vDvVf 87 (359)
T 1xyg_A 15 KDIRIGLLGASGYTGAEIVRLLANHP-HFQVTLMTADRKAGQSMESVFPH---LRAQKL-PTLVSV-K-DADFSTVDAVF 87 (359)
T ss_dssp CCEEEEEECCSSHHHHHHHHHHHTCS-SEEEEEEBCSTTTTSCHHHHCGG---GTTSCC-CCCBCG-G-GCCGGGCSEEE
T ss_pred cCcEEEEECcCCHHHHHHHHHHHcCC-CcEEEEEeCchhcCCCHHHhCch---hcCccc-ccceec-c-hhHhcCCCEEE
Confidence 346999999 7999999999999865 35777665433221222221110 111000 011111 2 33456899999
Q ss_pred EccChhhHHHHHHHhhhcCCCCCeEEEecc
Q 014700 205 HAMPVQFSSSFLEGISDYVDPGLPFISLSK 234 (420)
Q Consensus 205 laVp~~~l~~vl~~i~~~l~~~~iVVs~sn 234 (420)
+|+|.....+..... +.+..+|+++.
T Consensus 88 ~atp~~~s~~~a~~~----~aG~~VId~sa 113 (359)
T 1xyg_A 88 CCLPHGTTQEIIKEL----PTALKIVDLSA 113 (359)
T ss_dssp ECCCTTTHHHHHHTS----CTTCEEEECSS
T ss_pred EcCCchhHHHHHHHH----hCCCEEEECCc
Confidence 999988776665544 46788888875
No 325
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=96.59 E-value=0.0014 Score=65.19 Aligned_cols=100 Identities=21% Similarity=0.293 Sum_probs=59.7
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHhcCC----CCeEEEEeCCHHHHHHHHHhcCCCCCCCC-CCCCCceEEeCCHHHhccC
Q 014700 126 RTNKVVVLG-GGSFGTAMAAHVANKKS----QLKVYMLMRDPAVCQSINEKHCNCRYFPE-QKLPENVIATTDAKTALLG 199 (420)
Q Consensus 126 ~~mkI~IIG-aGamG~alA~~La~aG~----~~~V~l~~r~~~~~~~i~~~g~~~~~l~~-~~l~~~i~a~td~~eal~~ 199 (420)
.||||+|+| .|.+|..+.+.|.+.++ ..+|+.+.+....-+.+...+.. +.+ ..+ .+.. .+.++ +.+
T Consensus 8 ~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~---l~~~~~~--~~~~-~~~~~-~~~ 80 (352)
T 2nqt_A 8 NATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPH---LTPLAHR--VVEP-TEAAV-LGG 80 (352)
T ss_dssp SCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTT---CGGGTTC--BCEE-CCHHH-HTT
T ss_pred cCCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhccc---cccccee--eecc-CCHHH-hcC
Confidence 467999999 89999999999987640 24677665322110111111100 100 011 1111 24443 568
Q ss_pred CcEEEEccChhhHHHHHHHhhhcCCCCCeEEEeccCC
Q 014700 200 ADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGL 236 (420)
Q Consensus 200 aDiVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi 236 (420)
+|+||+|+|.....+++..+ +.+..+|+++.-.
T Consensus 81 ~DvVf~alg~~~s~~~~~~~----~~G~~vIDlSa~~ 113 (352)
T 2nqt_A 81 HDAVFLALPHGHSAVLAQQL----SPETLIIDCGADF 113 (352)
T ss_dssp CSEEEECCTTSCCHHHHHHS----CTTSEEEECSSTT
T ss_pred CCEEEECCCCcchHHHHHHH----hCCCEEEEECCCc
Confidence 99999999988766666655 3578888887543
No 326
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=96.56 E-value=0.0033 Score=60.50 Aligned_cols=89 Identities=15% Similarity=0.153 Sum_probs=57.1
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhc--CCCCeEE-EEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhcc--CC
Q 014700 126 RTNKVVVLGGGSFGTAMAAHVANK--KSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL--GA 200 (420)
Q Consensus 126 ~~mkI~IIGaGamG~alA~~La~a--G~~~~V~-l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~--~a 200 (420)
.++||+|||+|.||...+..|.+. ..+.++. +++++.. .+ .+ ++. .+|+++++. +.
T Consensus 6 ~~~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~~-----a~-----~~--------g~~-~~~~~ell~~~~v 66 (294)
T 1lc0_A 6 GKFGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRREL-----GS-----LD--------EVR-QISLEDALRSQEI 66 (294)
T ss_dssp CSEEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSSCC-----CE-----ET--------TEE-BCCHHHHHHCSSE
T ss_pred CcceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECchHH-----HH-----Hc--------CCC-CCCHHHHhcCCCC
Confidence 357999999999999999888651 1125555 5666421 00 00 222 358888775 68
Q ss_pred cEEEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCC
Q 014700 201 DYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (420)
Q Consensus 201 DiVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~ 237 (420)
|+|++|+|.....+++..... .++.|++ -|-+.
T Consensus 67 D~V~i~tp~~~H~~~~~~al~---aGkhVl~-EKPla 99 (294)
T 1lc0_A 67 DVAYICSESSSHEDYIRQFLQ---AGKHVLV-EYPMT 99 (294)
T ss_dssp EEEEECSCGGGHHHHHHHHHH---TTCEEEE-ESCSC
T ss_pred CEEEEeCCcHhHHHHHHHHHH---CCCcEEE-eCCCC
Confidence 999999998776666655433 4555543 45444
No 327
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=96.53 E-value=0.0028 Score=61.03 Aligned_cols=73 Identities=19% Similarity=0.176 Sum_probs=57.5
Q ss_pred CCCeEEEEcccH-HHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEE
Q 014700 126 RTNKVVVLGGGS-FGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (420)
Q Consensus 126 ~~mkI~IIGaGa-mG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVI 204 (420)
..+++.|||.|. +|.++|..|...| .+|++..+.. .++++.++.||+||
T Consensus 160 ~Gk~vvVvGrs~iVG~plA~lL~~~g--AtVtv~hs~T----------------------------~~L~~~~~~ADIVI 209 (286)
T 4a5o_A 160 YGMDAVVVGASNIVGRPMALELLLGG--CTVTVTHRFT----------------------------RDLADHVSRADLVV 209 (286)
T ss_dssp TTCEEEEECTTSTTHHHHHHHHHHTT--CEEEEECTTC----------------------------SCHHHHHHTCSEEE
T ss_pred CCCEEEEECCCchhHHHHHHHHHHCC--CeEEEEeCCC----------------------------cCHHHHhccCCEEE
Confidence 468999999876 8999999999988 8999886521 15777889999999
Q ss_pred EccChhhHHHHHHHhhhcCCCCCeEEEec
Q 014700 205 HAMPVQFSSSFLEGISDYVDPGLPFISLS 233 (420)
Q Consensus 205 laVp~~~l~~vl~~i~~~l~~~~iVVs~s 233 (420)
.+++...+ + -..+++++++||++.
T Consensus 210 ~Avg~p~~---I--~~~~vk~GavVIDvg 233 (286)
T 4a5o_A 210 VAAGKPGL---V--KGEWIKEGAIVIDVG 233 (286)
T ss_dssp ECCCCTTC---B--CGGGSCTTCEEEECC
T ss_pred ECCCCCCC---C--CHHHcCCCeEEEEec
Confidence 99985432 1 135678999999874
No 328
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=96.53 E-value=0.0053 Score=61.49 Aligned_cols=93 Identities=20% Similarity=0.200 Sum_probs=64.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCC----HHH----H----HHHHHhcCCCCCCCCCCCCCceEEeCCHH
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRD----PAV----C----QSINEKHCNCRYFPEQKLPENVIATTDAK 194 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~----~~~----~----~~i~~~g~~~~~l~~~~l~~~i~a~td~~ 194 (420)
..||.|+|+|.+|..+|+.|...|. .+|+++||+ .++ + +.+.+. .+. .....+++
T Consensus 192 ~~kVVv~GAGaAG~~iAkll~~~G~-~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~-~~~-----------~~~~~~L~ 258 (388)
T 1vl6_A 192 EVKVVVNGIGAAGYNIVKFLLDLGV-KNVVAVDRKGILNENDPETCLNEYHLEIARI-TNP-----------ERLSGDLE 258 (388)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTC-CEEEEEETTEECCTTSGGGCSSHHHHHHHHT-SCT-----------TCCCSCHH
T ss_pred CcEEEEECCCHHHHHHHHHHHhCCC-CeEEEEECCCcccCCCcccccCHHHHHHHHh-hhc-----------cCchhhHH
Confidence 4699999999999999999999982 489999998 432 1 122221 110 01134799
Q ss_pred HhccCCcEEEEccChh-hHHHHHHHhhhcCCCCCeEEEeccCC
Q 014700 195 TALLGADYCLHAMPVQ-FSSSFLEGISDYVDPGLPFISLSKGL 236 (420)
Q Consensus 195 eal~~aDiVIlaVp~~-~l~~vl~~i~~~l~~~~iVVs~snGi 236 (420)
|+++++|++|-+.... ..+++++. +.++.+|+.++|-.
T Consensus 259 eav~~ADVlIG~Sap~l~t~emVk~----Ma~~pIIfalSNPt 297 (388)
T 1vl6_A 259 TALEGADFFIGVSRGNILKPEWIKK----MSRKPVIFALANPV 297 (388)
T ss_dssp HHHTTCSEEEECSCSSCSCHHHHTT----SCSSCEEEECCSSS
T ss_pred HHHccCCEEEEeCCCCccCHHHHHh----cCCCCEEEEcCCCC
Confidence 9999999999876532 35555544 44577889999854
No 329
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=96.53 E-value=0.00052 Score=63.39 Aligned_cols=76 Identities=21% Similarity=0.384 Sum_probs=48.3
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEE
Q 014700 127 TNKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (420)
Q Consensus 127 ~mkI~IIG-aGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIl 205 (420)
||+|.|.| .|.+|.+++..|++.| .++|++++|+++..+.+...+ ...+ ...+.-..+++++++++|+||.
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~G-~~~V~~~~R~~~~~~~~~~~~--~~~~-----~~Dl~d~~~~~~~~~~~D~vv~ 94 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADKQ-TIKQTLFARQPAKIHKPYPTN--SQII-----MGDVLNHAALKQAMQGQDIVYA 94 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCT-TEEEEEEESSGGGSCSSCCTT--EEEE-----ECCTTCHHHHHHHHTTCSEEEE
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhCC-CceEEEEEcChhhhcccccCC--cEEE-----EecCCCHHHHHHHhcCCCEEEE
Confidence 67899999 5999999999999987 369999999876432211100 0000 0000001134456788999998
Q ss_pred ccChh
Q 014700 206 AMPVQ 210 (420)
Q Consensus 206 aVp~~ 210 (420)
+....
T Consensus 95 ~a~~~ 99 (236)
T 3qvo_A 95 NLTGE 99 (236)
T ss_dssp ECCST
T ss_pred cCCCC
Confidence 77643
No 330
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=96.53 E-value=0.0046 Score=58.89 Aligned_cols=77 Identities=17% Similarity=0.247 Sum_probs=50.7
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCC-----HHHHHHHHHh-cCCCCCCCCCCCCCceEEeCCHHHhcc
Q 014700 126 RTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRD-----PAVCQSINEK-HCNCRYFPEQKLPENVIATTDAKTALL 198 (420)
Q Consensus 126 ~~mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r~-----~~~~~~i~~~-g~~~~~l~~~~l~~~i~a~td~~eal~ 198 (420)
.+|+|.|+|+ |.+|.+++..|.+.| ++|++++|+ ++..+.+... ........+ .+.-..++.++++
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~-----D~~d~~~l~~~~~ 75 (313)
T 1qyd_A 3 KKSRVLIVGGTGYIGKRIVNASISLG--HPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEA-----SLDDHQRLVDALK 75 (313)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHTT--CCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECC-----CSSCHHHHHHHHT
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhCC--CcEEEEECCCcccchhHHHHHHHHHhCCeEEEeC-----CCCCHHHHHHHHh
Confidence 3689999996 999999999999998 899999998 4444443221 111111100 0110123556788
Q ss_pred CCcEEEEccCh
Q 014700 199 GADYCLHAMPV 209 (420)
Q Consensus 199 ~aDiVIlaVp~ 209 (420)
++|+||.+...
T Consensus 76 ~~d~vi~~a~~ 86 (313)
T 1qyd_A 76 QVDVVISALAG 86 (313)
T ss_dssp TCSEEEECCCC
T ss_pred CCCEEEECCcc
Confidence 99999998753
No 331
>3h2z_A Mannitol-1-phosphate 5-dehydrogenase; PSI- protein structure initiative, structural genomics, midwest for structural genomics (MCSG); 1.90A {Shigella flexneri 2a str}
Probab=96.52 E-value=0.0039 Score=62.55 Aligned_cols=108 Identities=15% Similarity=0.176 Sum_probs=70.5
Q ss_pred CeEEEEcccHHH-HHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCC----CCCceEEeC----CHHHhcc
Q 014700 128 NKVVVLGGGSFG-TAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQK----LPENVIATT----DAKTALL 198 (420)
Q Consensus 128 mkI~IIGaGamG-~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~----l~~~i~a~t----d~~eal~ 198 (420)
||+..+|+|++| ..++..|.++| ++|++.++++..++.+++.+.-...+-+.. .-.++++.. +.-+++.
T Consensus 1 mkavhfGaGniGRGfig~~l~~~g--~~v~f~dv~~~~i~~Ln~~~~Y~V~~~g~~~~~~~v~~v~ai~s~~~~~~~~i~ 78 (382)
T 3h2z_A 1 MKALHFGAGNIGRGFIGKLLADAG--IQLTFADVNQVVLDALNARHSYQVHVVGETEQVDTVSGVNAVSSIGDDVVDLIA 78 (382)
T ss_dssp CEEEEECCSHHHHHTHHHHHHHTT--CEEEEEESCHHHHHHHHHHSEEEEEEESSSEEEEEEESCEEEETTSSHHHHHHT
T ss_pred CcEEEECCCccchhhHHHHHHHcC--CeEEEEeCCHHHHHHHhcCCCEEEEEccCCcceEEEEEEEEEeCcHHHHHHHHc
Confidence 799999999999 55666778888 999999999999999998753111111111 112344332 1233567
Q ss_pred CCcEEEEccChhhHHHHHHHhhhcC--------CCCCeEEEeccCCC
Q 014700 199 GADYCLHAMPVQFSSSFLEGISDYV--------DPGLPFISLSKGLE 237 (420)
Q Consensus 199 ~aDiVIlaVp~~~l~~vl~~i~~~l--------~~~~iVVs~snGi~ 237 (420)
++|+|..++....++.+...|...+ .+.-.|++|-|-..
T Consensus 79 ~adlitT~vG~~~l~~i~~~l~~~L~~R~~~~~~~pltilsCeN~~~ 125 (382)
T 3h2z_A 79 QVDLVTTAVGPVVLERIAPAIAKGLVKRKEQGNESPLNIIACENMVR 125 (382)
T ss_dssp TCSEEEECCCHHHHHHTHHHHHHHHHHHHHHTCCSCEEEEECCSSTT
T ss_pred CCCEEEECCCcccHHHHHHHHHHHHHHHHHcCCCCCcEEEECCCccc
Confidence 9999999999776666554443322 13345788887443
No 332
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=96.50 E-value=0.0051 Score=60.43 Aligned_cols=97 Identities=16% Similarity=0.226 Sum_probs=58.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhc-------CCCCeEE-EEeCCHHHH------HHHHHhcCCCCCCCCCCCCCceEEe--
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANK-------KSQLKVY-MLMRDPAVC------QSINEKHCNCRYFPEQKLPENVIAT-- 190 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~a-------G~~~~V~-l~~r~~~~~------~~i~~~g~~~~~l~~~~l~~~i~a~-- 190 (420)
|+||+|||+|.||..++..|.+. |.+.+|. +++++.+.. +.+.+.... ...+
T Consensus 2 mirvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~id~~~~~~~~~~~------------~~~~~~ 69 (327)
T 3do5_A 2 MIKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDFSLVEALRMKRET------------GMLRDD 69 (327)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESSCCHHHHHHHHHHH------------SSCSBC
T ss_pred cEEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccccCHHHHHhhhccC------------ccccCC
Confidence 67999999999999999999875 1125666 455653221 111111000 0112
Q ss_pred CCHHHhcc--CCcEEEEccChhhH-HHHHHHhhhcCCCCCeEEEeccC
Q 014700 191 TDAKTALL--GADYCLHAMPVQFS-SSFLEGISDYVDPGLPFISLSKG 235 (420)
Q Consensus 191 td~~eal~--~aDiVIlaVp~~~l-~~vl~~i~~~l~~~~iVVs~snG 235 (420)
.|+++.+. +.|+|+.|+|+... .+..+.+...+..+.-||+..|+
T Consensus 70 ~d~~~ll~~~~iDvVv~~tp~~~h~~~a~~~~~~aL~aGkhVv~~NKk 117 (327)
T 3do5_A 70 AKAIEVVRSADYDVLIEASVTRVDGGEGVNYIREALKRGKHVVTSNKG 117 (327)
T ss_dssp CCHHHHHHHSCCSEEEECCCCC----CHHHHHHHHHTTTCEEEECCSH
T ss_pred CCHHHHhcCCCCCEEEECCCCcccchhHHHHHHHHHHCCCeEEecCch
Confidence 27777664 68999999997642 11333445556678888876654
No 333
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=96.50 E-value=0.0018 Score=63.42 Aligned_cols=94 Identities=17% Similarity=0.196 Sum_probs=61.3
Q ss_pred CCeEEEEcccHH-HHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEE--e--CCHHHhccCCc
Q 014700 127 TNKVVVLGGGSF-GTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIA--T--TDAKTALLGAD 201 (420)
Q Consensus 127 ~mkI~IIGaGam-G~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a--~--td~~eal~~aD 201 (420)
.+++.|||+|.| |..+|..|...| .+|++++|+..... +.. ..+... ....... + .++++.+.+||
T Consensus 177 gk~vvVIG~G~iVG~~~A~~L~~~g--AtVtv~nR~~~~l~---~ra---~~la~~-~~~~t~~~~t~~~~L~e~l~~AD 247 (320)
T 1edz_A 177 GKKCIVINRSEIVGRPLAALLANDG--ATVYSVDVNNIQKF---TRG---ESLKLN-KHHVEDLGEYSEDLLKKCSLDSD 247 (320)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHTTS--CEEEEECSSEEEEE---ESC---CCSSCC-CCEEEEEEECCHHHHHHHHHHCS
T ss_pred CCEEEEECCCcchHHHHHHHHHHCC--CEEEEEeCchHHHH---hHH---HHHhhh-cccccccccccHhHHHHHhccCC
Confidence 679999999976 999999999988 79999988742110 000 001100 0000001 2 57888899999
Q ss_pred EEEEccChhhHHHHHHHhhhcCCCCCeEEEec
Q 014700 202 YCLHAMPVQFSSSFLEGISDYVDPGLPFISLS 233 (420)
Q Consensus 202 iVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~s 233 (420)
+||.+++.... ++. ..+++++.+||++.
T Consensus 248 IVIsAtg~p~~--vI~--~e~vk~GavVIDVg 275 (320)
T 1edz_A 248 VVITGVPSENY--KFP--TEYIKEGAVCINFA 275 (320)
T ss_dssp EEEECCCCTTC--CBC--TTTSCTTEEEEECS
T ss_pred EEEECCCCCcc--eeC--HHHcCCCeEEEEcC
Confidence 99999996431 010 34567888998885
No 334
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=96.48 E-value=0.0038 Score=60.97 Aligned_cols=99 Identities=19% Similarity=0.187 Sum_probs=62.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCC---HHHHHHHHHhcCCCCCCCCCCCCCceEE--eCCH---HHhcc
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRD---PAVCQSINEKHCNCRYFPEQKLPENVIA--TTDA---KTALL 198 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~---~~~~~~i~~~g~~~~~l~~~~l~~~i~a--~td~---~eal~ 198 (420)
.+++.|+|+|.+|.+++..|++.|. .+|++++|+ .++++++.+.-.. . ....+.+ ..+. .+.+.
T Consensus 148 gk~~lVlGAGGaaraia~~L~~~G~-~~v~v~nRt~~~~~~a~~la~~~~~-~------~~~~v~~~~~~~l~~~~~~l~ 219 (312)
T 3t4e_A 148 GKTMVLLGAGGAATAIGAQAAIEGI-KEIKLFNRKDDFFEKAVAFAKRVNE-N------TDCVVTVTDLADQHAFTEALA 219 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC-SEEEEEECSSTHHHHHHHHHHHHHH-H------SSCEEEEEETTCHHHHHHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCC-CEEEEEECCCchHHHHHHHHHHhhh-c------cCcceEEechHhhhhhHhhcc
Confidence 5799999999999999999999882 389999999 7777766542100 0 0001122 2243 45567
Q ss_pred CCcEEEEccChhhHHHHHHHh---hhcCCCCCeEEEec
Q 014700 199 GADYCLHAMPVQFSSSFLEGI---SDYVDPGLPFISLS 233 (420)
Q Consensus 199 ~aDiVIlaVp~~~l~~vl~~i---~~~l~~~~iVVs~s 233 (420)
++|+||-|+|..-...--..+ ...++++.+|+.+.
T Consensus 220 ~~DiIINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~v 257 (312)
T 3t4e_A 220 SADILTNGTKVGMKPLENESLIGDVSLLRPELLVTECV 257 (312)
T ss_dssp HCSEEEECSSTTSTTSTTCCSCCCGGGSCTTCEEEECC
T ss_pred CceEEEECCcCCCCCCCCCcccCCHHHcCCCCEEEEec
Confidence 899999999953210000001 13455667777664
No 335
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=96.47 E-value=0.0057 Score=57.65 Aligned_cols=35 Identities=23% Similarity=0.318 Sum_probs=30.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCH
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~ 162 (420)
..+|.|||+|.+|+.++..|++.|. .+++++|++.
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gv-g~i~lvD~d~ 62 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGV-GTLVLADDDD 62 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTC-SEEEEECCCB
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCC-CeEEEEeCCC
Confidence 5799999999999999999999984 4889997763
No 336
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=96.46 E-value=0.0048 Score=58.61 Aligned_cols=87 Identities=11% Similarity=0.227 Sum_probs=54.0
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCC------HHHHHHHHHh-cCCCCCCCCCCCCCceEEeCCHHHhc
Q 014700 126 RTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRD------PAVCQSINEK-HCNCRYFPEQKLPENVIATTDAKTAL 197 (420)
Q Consensus 126 ~~mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r~------~~~~~~i~~~-g~~~~~l~~~~l~~~i~a~td~~eal 197 (420)
.+|+|.|+|+ |.+|.+++..|.+.| ++|++.+|+ +++.+.+... ......... .+.-..++.+++
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~-----D~~d~~~l~~~~ 75 (308)
T 1qyc_A 3 SRSRILLIGATGYIGRHVAKASLDLG--HPTFLLVRESTASSNSEKAQLLESFKASGANIVHG-----SIDDHASLVEAV 75 (308)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHTT--CCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECC-----CTTCHHHHHHHH
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhCC--CCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEe-----ccCCHHHHHHHH
Confidence 3689999997 999999999999998 899999997 3333333211 111111100 000012345667
Q ss_pred cCCcEEEEccChh---hHHHHHHHh
Q 014700 198 LGADYCLHAMPVQ---FSSSFLEGI 219 (420)
Q Consensus 198 ~~aDiVIlaVp~~---~l~~vl~~i 219 (420)
+++|+||.+.... ....+++.+
T Consensus 76 ~~~d~vi~~a~~~~~~~~~~l~~aa 100 (308)
T 1qyc_A 76 KNVDVVISTVGSLQIESQVNIIKAI 100 (308)
T ss_dssp HTCSEEEECCCGGGSGGGHHHHHHH
T ss_pred cCCCEEEECCcchhhhhHHHHHHHH
Confidence 8999999988743 234444444
No 337
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=96.39 E-value=0.0012 Score=65.11 Aligned_cols=89 Identities=25% Similarity=0.413 Sum_probs=56.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCC-------CCeEE-EEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhcc
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKS-------QLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL 198 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~-------~~~V~-l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~ 198 (420)
++||+|||+|.||..++..|.+... +.+|. +++|+.++. .+ + +. ...++|+++.+
T Consensus 3 ~irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~-----~~-----~-----~~-~~~~~d~~~ll- 65 (332)
T 2ejw_A 3 ALKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPRKP-----RA-----I-----PQ-ELLRAEPFDLL- 65 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTTSC-----CS-----S-----CG-GGEESSCCCCT-
T ss_pred eeEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHHHh-----hc-----c-----Cc-ccccCCHHHHh-
Confidence 4699999999999999999987520 13444 556764321 11 1 11 13456777777
Q ss_pred CCcEEEEccChhh-HHHHHHHhhhcCCCCCeEEEeccC
Q 014700 199 GADYCLHAMPVQF-SSSFLEGISDYVDPGLPFISLSKG 235 (420)
Q Consensus 199 ~aDiVIlaVp~~~-l~~vl~~i~~~l~~~~iVVs~snG 235 (420)
+.|+|+.|+|... ..+.+.+ .+..++-||+..+.
T Consensus 66 ~iDvVve~t~~~~~a~~~~~~---AL~aGKhVVtaNkk 100 (332)
T 2ejw_A 66 EADLVVEAMGGVEAPLRLVLP---ALEAGIPLITANKA 100 (332)
T ss_dssp TCSEEEECCCCSHHHHHHHHH---HHHTTCCEEECCHH
T ss_pred CCCEEEECCCCcHHHHHHHHH---HHHcCCeEEECCch
Confidence 9999999999753 3444433 23456777765443
No 338
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=96.38 E-value=0.0053 Score=60.26 Aligned_cols=98 Identities=12% Similarity=0.171 Sum_probs=57.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhc-----CCCCeEE-EEeCCHH---------HH-HHHHHhcCCCCCCCCCCCCCceEEe
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANK-----KSQLKVY-MLMRDPA---------VC-QSINEKHCNCRYFPEQKLPENVIAT 190 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~a-----G~~~~V~-l~~r~~~---------~~-~~i~~~g~~~~~l~~~~l~~~i~a~ 190 (420)
++||+|||+|.||..++..|.+. |.+.+|. +.+++.+ .. +...+.+. ++.. ..
T Consensus 4 ~irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~~~~~~~~~idl~~~~~~~~~~g~----~~~~-------~~ 72 (325)
T 3ing_A 4 EIRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDSRSYASGRNLDISSIISNKEKTGR----ISDR-------AF 72 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECSSBEEECSSCCHHHHHHHHHHHSC----SCSS-------BC
T ss_pred eEEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEecChhhcccccCHHHHHHHhhhcCC----CCcc-------cC
Confidence 46899999999999999999874 2224555 3455532 11 11222221 0100 01
Q ss_pred CCHHHhcc--CCcEEEEccChhhH-HHHHHHhhhcCCCCCeEEEeccCC
Q 014700 191 TDAKTALL--GADYCLHAMPVQFS-SSFLEGISDYVDPGLPFISLSKGL 236 (420)
Q Consensus 191 td~~eal~--~aDiVIlaVp~~~l-~~vl~~i~~~l~~~~iVVs~snGi 236 (420)
|.++.+. +.|+|+.|+|+... +...+.+...++.+.-||+..|+.
T Consensus 73 -d~~e~l~~~~iDvVVe~T~~~~~~~pa~~~~~~aL~aGkhVVtaNK~~ 120 (325)
T 3ing_A 73 -SGPEDLMGEAADLLVDCTPASRDGVREYSLYRMAFESGMNVVTANKSG 120 (325)
T ss_dssp -CSGGGGTTSCCSEEEECCCCCSSSHHHHHHHHHHHHTTCEEEECCCHH
T ss_pred -CHHHHhcCCCCCEEEECCCCccccchHHHHHHHHHHCCCeEEEcCchh
Confidence 3344443 58999999997532 333344445556788888776643
No 339
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=96.33 E-value=0.011 Score=62.50 Aligned_cols=34 Identities=21% Similarity=0.351 Sum_probs=30.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCC
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRD 161 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~ 161 (420)
..||.|||+|..|+.+|..|+..|. -+++++|.+
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~aGV-G~ItLvD~D 360 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIAWGV-RKITFVDNG 360 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTC-CEEEEECCS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCC-CEEEEECCC
Confidence 4699999999999999999999995 489999766
No 340
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=96.30 E-value=0.0073 Score=59.84 Aligned_cols=103 Identities=22% Similarity=0.277 Sum_probs=59.8
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhcCCCCeEEEEeCCHH-HHHHHHHhcCCCC--CCCCCCCCCceEEeCCHHHhcc-CCc
Q 014700 127 TNKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRDPA-VCQSINEKHCNCR--YFPEQKLPENVIATTDAKTALL-GAD 201 (420)
Q Consensus 127 ~mkI~IIG-aGamG~alA~~La~aG~~~~V~l~~r~~~-~~~~i~~~g~~~~--~l~~~~l~~~i~a~td~~eal~-~aD 201 (420)
++||+|+| .|.+|..+.+.|.+.. +.+|..+.+++. ..+.+.+.+.... .++.......+. ..++++.++ ++|
T Consensus 8 ~~kV~IiGAtG~iG~~llr~L~~~p-~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~D 85 (354)
T 1ys4_A 8 KIKVGVLGATGSVGQRFVQLLADHP-MFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVI-PTDPKHEEFEDVD 85 (354)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCS-SEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCE-ESCTTSGGGTTCC
T ss_pred cceEEEECcCCHHHHHHHHHHhcCC-CCEEEEEEcccccccccHHHhcccccccccccCceeeEEE-eCCHHHHhcCCCC
Confidence 47999999 7999999999998764 367776653221 1112222111000 000000000111 124555446 899
Q ss_pred EEEEccChhhHHHHHHHhhhcCCCCCeEEEecc
Q 014700 202 YCLHAMPVQFSSSFLEGISDYVDPGLPFISLSK 234 (420)
Q Consensus 202 iVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~sn 234 (420)
+||+|+|.....+....+.. .+..||+.+.
T Consensus 86 vV~~atp~~~~~~~a~~~~~---aG~~VId~s~ 115 (354)
T 1ys4_A 86 IVFSALPSDLAKKFEPEFAK---EGKLIFSNAS 115 (354)
T ss_dssp EEEECCCHHHHHHHHHHHHH---TTCEEEECCS
T ss_pred EEEECCCchHHHHHHHHHHH---CCCEEEECCc
Confidence 99999998877777666543 5677888764
No 341
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=96.20 E-value=0.017 Score=57.03 Aligned_cols=102 Identities=18% Similarity=0.186 Sum_probs=58.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEE-EeCCHHHHHHHHHhc-CC--CCC-CCC-C-CC-CCceEEeCCHHHhcc
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYM-LMRDPAVCQSINEKH-CN--CRY-FPE-Q-KL-PENVIATTDAKTALL 198 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l-~~r~~~~~~~i~~~g-~~--~~~-l~~-~-~l-~~~i~a~td~~eal~ 198 (420)
|+||+|+|+|.+|..+++.|.+.. +.+|.. .+++++....+.+.. .. .++ .++ . .+ ...+.+..++++...
T Consensus 2 mikVgI~G~G~IGr~v~r~l~~~~-~~evvaV~d~~~~~~~~l~~~dg~s~~g~~~~~~~v~~~~~~~l~v~~~~~~~~~ 80 (343)
T 2yyy_A 2 PAKVLINGYGSIGKRVADAVSMQD-DMEVIGVTKTKPDFEARLAVEKGYKLFVAIPDNERVKLFEDAGIPVEGTILDIIE 80 (343)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHSS-SEEEEEEEESSCSHHHHHHHHTTCCEEESSCCHHHHHHHHHTTCCCCCBGGGTGG
T ss_pred ceEEEEECCCHHHHHHHHHHHhCC-CceEEEEecCCHHHHHHHHHhcCCccccccCCCceeecccCCeEEECCchHHhcc
Confidence 469999999999999999998763 256553 455554444443321 00 000 000 0 00 001222234555557
Q ss_pred CCcEEEEccChhhHHHHHHHhhhcCCCCCeEEE
Q 014700 199 GADYCLHAMPVQFSSSFLEGISDYVDPGLPFIS 231 (420)
Q Consensus 199 ~aDiVIlaVp~~~l~~vl~~i~~~l~~~~iVVs 231 (420)
++|+||.|+|.....+..+ ..+++.|+.||.
T Consensus 81 ~vDiV~eatg~~~s~~~a~--~~~l~aG~~VI~ 111 (343)
T 2yyy_A 81 DADIVVDGAPKKIGKQNLE--NIYKPHKVKAIL 111 (343)
T ss_dssp GCSEEEECCCTTHHHHHHH--HTTTTTTCEEEE
T ss_pred CCCEEEECCCccccHHHHH--HHHHHCCCEEEE
Confidence 8999999999876555443 345556666554
No 342
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=96.17 E-value=0.0069 Score=58.01 Aligned_cols=99 Identities=16% Similarity=0.297 Sum_probs=61.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEc
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIla 206 (420)
.+++.|+|+|.+|.++|..|++.| +|++++|+.++++.+.+.-.. .. .......+.+. +..+.+.++|+||.+
T Consensus 128 ~k~vlV~GaGgiG~aia~~L~~~G---~V~v~~r~~~~~~~l~~~~~~-~~--~~~~~~~~d~~-~~~~~~~~~DilVn~ 200 (287)
T 1nvt_A 128 DKNIVIYGAGGAARAVAFELAKDN---NIIIANRTVEKAEALAKEIAE-KL--NKKFGEEVKFS-GLDVDLDGVDIIINA 200 (287)
T ss_dssp SCEEEEECCSHHHHHHHHHHTSSS---EEEEECSSHHHHHHHHHHHHH-HH--TCCHHHHEEEE-CTTCCCTTCCEEEEC
T ss_pred CCEEEEECchHHHHHHHHHHHHCC---CEEEEECCHHHHHHHHHHHhh-hc--ccccceeEEEe-eHHHhhCCCCEEEEC
Confidence 578999999999999999999875 899999998877666542100 00 00000011222 234456789999999
Q ss_pred cChhhHHH---H-HHHhhhcCCCCCeEEEec
Q 014700 207 MPVQFSSS---F-LEGISDYVDPGLPFISLS 233 (420)
Q Consensus 207 Vp~~~l~~---v-l~~i~~~l~~~~iVVs~s 233 (420)
++...... . +. -...++++.+++.+.
T Consensus 201 ag~~~~~~~~~~~~~-~~~~l~~~~~v~Dv~ 230 (287)
T 1nvt_A 201 TPIGMYPNIDVEPIV-KAEKLREDMVVMDLI 230 (287)
T ss_dssp SCTTCTTCCSSCCSS-CSTTCCSSSEEEECC
T ss_pred CCCCCCCCCCCCCCC-CHHHcCCCCEEEEee
Confidence 98543210 0 00 123456677788775
No 343
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=96.15 E-value=0.0057 Score=62.93 Aligned_cols=95 Identities=16% Similarity=0.199 Sum_probs=60.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCC---eEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCC-----HHHhcc
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQL---KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTD-----AKTALL 198 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~---~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td-----~~eal~ 198 (420)
.+||.|||+|.||+.++..|+++. ++ +|++.|.+....+.....+.... .+.++.+ ++.+++
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~~-dv~~~~I~vaD~~~~~~~~~~~~g~~~~---------~~~Vdadnv~~~l~aLl~ 82 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEKF-DIKPSQVTIIAAEGTKVDVAQQYGVSFK---------LQQITPQNYLEVIGSTLE 82 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHHB-CCCGGGEEEEESSCCSCCHHHHHTCEEE---------ECCCCTTTHHHHTGGGCC
T ss_pred CCCEEEECcCHHHHHHHHHHHhCC-CCceeEEEEeccchhhhhHHhhcCCcee---------EEeccchhHHHHHHHHhc
Confidence 579999999999999999999974 34 68888876543222222221100 1111112 234556
Q ss_pred CCcEEEEccChhhHHHHHHHhhhcCCCCCeEEEecc
Q 014700 199 GADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSK 234 (420)
Q Consensus 199 ~aDiVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~sn 234 (420)
+.|+||-+.+......+++.... .+.-.+++++
T Consensus 83 ~~DvVIN~s~~~~~l~Im~acle---aGv~YlDTa~ 115 (480)
T 2ph5_A 83 ENDFLIDVSIGISSLALIILCNQ---KGALYINAAT 115 (480)
T ss_dssp TTCEEEECCSSSCHHHHHHHHHH---HTCEEEESSC
T ss_pred CCCEEEECCccccCHHHHHHHHH---cCCCEEECCC
Confidence 67999998887776666666544 3667777765
No 344
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=96.15 E-value=0.0014 Score=58.13 Aligned_cols=35 Identities=26% Similarity=0.476 Sum_probs=32.4
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCHHH
Q 014700 128 NKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAV 164 (420)
Q Consensus 128 mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r~~~~ 164 (420)
|+|.|+|+ |.+|..++..|.+.| ++|++++|+++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g--~~V~~~~r~~~~ 39 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAG--YEVTVLVRDSSR 39 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT--CEEEEEESCGGG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEEeChhh
Confidence 79999998 999999999999998 999999998753
No 345
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=96.15 E-value=0.0084 Score=59.47 Aligned_cols=99 Identities=15% Similarity=0.226 Sum_probs=61.7
Q ss_pred cCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEE
Q 014700 125 ERTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (420)
Q Consensus 125 ~~~mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiV 203 (420)
..|.||+|||+ |..|.-|.+.|.+.- ..++..+.-....-+.+.+.+.... .+.. +.. .+.++...++|++
T Consensus 11 ~~~~~V~IvGAtG~vG~ellrlL~~hP-~~el~~l~S~~~aG~~~~~~~p~~~--~~l~----~~~-~~~~~~~~~~Dvv 82 (351)
T 1vkn_A 11 HHMIRAGIIGATGYTGLELVRLLKNHP-EAKITYLSSRTYAGKKLEEIFPSTL--ENSI----LSE-FDPEKVSKNCDVL 82 (351)
T ss_dssp -CCEEEEEESTTSHHHHHHHHHHHHCT-TEEEEEEECSTTTTSBHHHHCGGGC--CCCB----CBC-CCHHHHHHHCSEE
T ss_pred cceeEEEEECCCCHHHHHHHHHHHcCC-CcEEEEEeCcccccCChHHhChhhc--cCce----EEe-CCHHHhhcCCCEE
Confidence 34679999995 999999999999864 3577766533222122222111100 0111 111 2455544689999
Q ss_pred EEccChhhHHHHHHHhhhcCCCCCeEEEeccCC
Q 014700 204 LHAMPVQFSSSFLEGISDYVDPGLPFISLSKGL 236 (420)
Q Consensus 204 IlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi 236 (420)
|+|+|...-.++..++ .+..||+++.-+
T Consensus 83 f~alp~~~s~~~~~~~-----~g~~VIDlSsdf 110 (351)
T 1vkn_A 83 FTALPAGASYDLVREL-----KGVKIIDLGADF 110 (351)
T ss_dssp EECCSTTHHHHHHTTC-----CSCEEEESSSTT
T ss_pred EECCCcHHHHHHHHHh-----CCCEEEECChhh
Confidence 9999988877766554 588899988543
No 346
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=96.14 E-value=0.0034 Score=59.25 Aligned_cols=72 Identities=11% Similarity=0.103 Sum_probs=48.5
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhc-CCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEE
Q 014700 128 NKVVVLGG-GSFGTAMAAHVANK-KSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (420)
Q Consensus 128 mkI~IIGa-GamG~alA~~La~a-G~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIl 205 (420)
|||.|.|+ |.+|..++..|.+. | ++|++.+|+++....+...+. .+... .+.-..+++++++++|+||.
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g--~~V~~~~R~~~~~~~~~~~~v--~~~~~-----D~~d~~~l~~~~~~~d~vi~ 71 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHI--DHFHIGVRNVEKVPDDWRGKV--SVRQL-----DYFNQESMVEAFKGMDTVVF 71 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTC--TTEEEEESSGGGSCGGGBTTB--EEEEC-----CTTCHHHHHHHTTTCSEEEE
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCC--CcEEEEECCHHHHHHhhhCCC--EEEEc-----CCCCHHHHHHHHhCCCEEEE
Confidence 68999995 99999999999987 7 899999999865433322111 10000 00001134567889999999
Q ss_pred ccC
Q 014700 206 AMP 208 (420)
Q Consensus 206 aVp 208 (420)
+..
T Consensus 72 ~a~ 74 (289)
T 3e48_A 72 IPS 74 (289)
T ss_dssp CCC
T ss_pred eCC
Confidence 865
No 347
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=96.05 E-value=0.004 Score=61.15 Aligned_cols=33 Identities=27% Similarity=0.410 Sum_probs=30.9
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCH
Q 014700 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (420)
Q Consensus 128 mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~ 162 (420)
|||.|||+|..|.++|..|+++| ++|++++|++
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G--~~v~v~Er~~ 34 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHG--IKVTIYERNS 34 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSC
T ss_pred CEEEEECcCHHHHHHHHHHHhCC--CCEEEEecCC
Confidence 79999999999999999999999 9999998754
No 348
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=96.05 E-value=0.0052 Score=58.33 Aligned_cols=84 Identities=17% Similarity=0.223 Sum_probs=54.7
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCH-------HHHHHHH---HhcCCCCCCCCCCCCCceEEeCCHHH
Q 014700 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDP-------AVCQSIN---EKHCNCRYFPEQKLPENVIATTDAKT 195 (420)
Q Consensus 127 ~mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r~~-------~~~~~i~---~~g~~~~~l~~~~l~~~i~a~td~~e 195 (420)
+|+|.|.|+ |.+|.+++..|.+.| ++|++.+|++ ++.+.+. ..+. ..+.. .+.-..++.+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v--~~v~~-----D~~d~~~l~~ 72 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAG--NPTYALVRKTITAANPETKEELIDNYQSLGV--ILLEG-----DINDHETLVK 72 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHT--CCEEEEECCSCCSSCHHHHHHHHHHHHHTTC--EEEEC-----CTTCHHHHHH
T ss_pred CcEEEEECCCchHHHHHHHHHHhCC--CcEEEEECCCcccCChHHHHHHHHHHHhCCC--EEEEe-----CCCCHHHHHH
Confidence 579999997 999999999999998 8999999986 5444332 2221 11000 0000113456
Q ss_pred hccCCcEEEEccCh---hhHHHHHHHh
Q 014700 196 ALLGADYCLHAMPV---QFSSSFLEGI 219 (420)
Q Consensus 196 al~~aDiVIlaVp~---~~l~~vl~~i 219 (420)
+++++|+||.+... .....+++.+
T Consensus 73 ~~~~~d~vi~~a~~~~~~~~~~l~~aa 99 (307)
T 2gas_A 73 AIKQVDIVICAAGRLLIEDQVKIIKAI 99 (307)
T ss_dssp HHTTCSEEEECSSSSCGGGHHHHHHHH
T ss_pred HHhCCCEEEECCcccccccHHHHHHHH
Confidence 67899999998763 3344445444
No 349
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=95.98 E-value=0.006 Score=63.94 Aligned_cols=122 Identities=11% Similarity=0.122 Sum_probs=61.7
Q ss_pred CccccchhhhchhcceeccccccccccchhhcCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcC
Q 014700 94 GRDRRKIVKVAWEKLVRWSRTWRSKAKTDILERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHC 173 (420)
Q Consensus 94 ~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~ 173 (420)
.++|+....|..+.+-+... ..+... .. ++|.|+|+|.+|..+|..|.+.| ++|++.+.+++.++.+.
T Consensus 321 ~~GD~L~v~g~~~~l~~~~~----~~~~~~-~~-~~viIiG~G~~G~~la~~L~~~g--~~v~vid~d~~~~~~~~---- 388 (565)
T 4gx0_A 321 TEQSLLVLAGTKSQLAALEY----LIGEAP-ED-ELIFIIGHGRIGCAAAAFLDRKP--VPFILIDRQESPVCNDH---- 388 (565)
T ss_dssp -------------------------------CC-CCEEEECCSHHHHHHHHHHHHTT--CCEEEEESSCCSSCCSS----
T ss_pred CCCCEEEEEeCHHHHHHHHH----HhcCCC-CC-CCEEEECCCHHHHHHHHHHHHCC--CCEEEEECChHHHhhcC----
Confidence 34566777776666422221 111111 22 79999999999999999999998 99999999987543321
Q ss_pred CCCCCCCCCCCCceEEeCCHHHh-ccCCcEEEEccChhhHHHHHHHhhhcCCCCCeEEEecc
Q 014700 174 NCRYFPEQKLPENVIATTDAKTA-LLGADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSK 234 (420)
Q Consensus 174 ~~~~l~~~~l~~~i~a~td~~ea-l~~aDiVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~sn 234 (420)
.....+..-+ ..++++ ++++|.+|++++++...-++-.++..+.++..+|.-.+
T Consensus 389 -~~i~gD~t~~------~~L~~agi~~ad~vi~~~~~d~~ni~~~~~ak~l~~~~~iiar~~ 443 (565)
T 4gx0_A 389 -VVVYGDATVG------QTLRQAGIDRASGIIVTTNDDSTNIFLTLACRHLHSHIRIVARAN 443 (565)
T ss_dssp -CEEESCSSSS------THHHHHTTTSCSEEEECCSCHHHHHHHHHHHHHHCSSSEEEEEES
T ss_pred -CEEEeCCCCH------HHHHhcCccccCEEEEECCCchHHHHHHHHHHHHCCCCEEEEEEC
Confidence 0001110000 123333 67899999999987543333334444555545555554
No 350
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=95.97 E-value=0.021 Score=56.23 Aligned_cols=100 Identities=14% Similarity=0.135 Sum_probs=57.1
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEE-eC--CHHHHHHHHHhc-CCCCCCC-C-------CCC--C-CceEEe--
Q 014700 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYML-MR--DPAVCQSINEKH-CNCRYFP-E-------QKL--P-ENVIAT-- 190 (420)
Q Consensus 128 mkI~IIGaGamG~alA~~La~aG~~~~V~l~-~r--~~~~~~~i~~~g-~~~~~l~-~-------~~l--~-~~i~a~-- 190 (420)
+||+|+|+|.+|..+.+.|.+.. +.+|..+ ++ +.+....+.+.. ...+ ++ + ..+ . ..+.+.
T Consensus 4 ikVgI~G~GrIGr~l~R~l~~~p-~vevvaI~d~~~~~~~~~~ll~yds~~g~-~~~~~v~~~~~~~l~~~g~~i~v~~~ 81 (337)
T 3e5r_O 4 IKIGINGFGRIGRLVARVALQSE-DVELVAVNDPFITTDYMTYMFKYDTVHGQ-WKHSDIKIKDSKTLLLGEKPVTVFGI 81 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCS-SEEEEEEECSSSCHHHHHHHHHCCTTTCC-CCSSCEEESSSSEEEETTEEEEEECC
T ss_pred eEEEEECcCHHHHHHHHHHhCCC-CeEEEEEECCCCCHHHHHHhhcccccCCC-CCCCcEEeecCCeeEECCeEEEEEec
Confidence 59999999999999999998763 2566644 32 444444443211 1111 11 1 001 0 122323
Q ss_pred CCHHHhc---cCCcEEEEccChhhHHHHHHHhhhcCCCCC--eEEEe
Q 014700 191 TDAKTAL---LGADYCLHAMPVQFSSSFLEGISDYVDPGL--PFISL 232 (420)
Q Consensus 191 td~~eal---~~aDiVIlaVp~~~l~~vl~~i~~~l~~~~--iVVs~ 232 (420)
.|+++.- .++|+||.|+|.....+....... .|. +||+.
T Consensus 82 ~dp~~l~w~~~~vDvV~eaTg~~~~~e~a~~~l~---aGak~VVIs~ 125 (337)
T 3e5r_O 82 RNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLK---GGAKKVVISA 125 (337)
T ss_dssp SCGGGCCHHHHTCSEEEECSSSCCSHHHHTHHHH---TTCSEEEESS
T ss_pred CChHHccccccCCCEEEECCCchhhHHHHHHHHH---cCCCEEEEec
Confidence 2666531 479999999998766655544332 344 56554
No 351
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.97 E-value=0.012 Score=60.20 Aligned_cols=66 Identities=26% Similarity=0.227 Sum_probs=47.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCH----HHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccC-Cc
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP----AVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLG-AD 201 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~----~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~-aD 201 (420)
.+||.|||+|..|.+.|..|.+.| ++|+++|+++ ...+.+.+.|.. +..-.++++.+.+ +|
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G--~~V~~~D~~~~~~~~~~~~L~~~gi~------------~~~g~~~~~~~~~~~d 74 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLG--AIVTVNDGKPFDENPTAQSLLEEGIK------------VVCGSHPLELLDEDFC 74 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTT--CEEEEEESSCGGGCHHHHHHHHTTCE------------EEESCCCGGGGGSCEE
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCC--CEEEEEeCCcccCChHHHHHHhCCCE------------EEECCChHHhhcCCCC
Confidence 579999999999999999999998 9999999853 234566665531 1111233344455 89
Q ss_pred EEEEc
Q 014700 202 YCLHA 206 (420)
Q Consensus 202 iVIla 206 (420)
+||++
T Consensus 75 ~vv~s 79 (451)
T 3lk7_A 75 YMIKN 79 (451)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99985
No 352
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=95.96 E-value=0.0061 Score=59.91 Aligned_cols=97 Identities=14% Similarity=0.180 Sum_probs=56.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhc------CCCCeEE-EEeCCHHHHHH------HHHhcCCCCCCCCCCCCCce-EEeC
Q 014700 126 RTNKVVVLGGGSFGTAMAAHVANK------KSQLKVY-MLMRDPAVCQS------INEKHCNCRYFPEQKLPENV-IATT 191 (420)
Q Consensus 126 ~~mkI~IIGaGamG~alA~~La~a------G~~~~V~-l~~r~~~~~~~------i~~~g~~~~~l~~~~l~~~i-~a~t 191 (420)
.++||+|||+|.||..++..|.+. |.+.+|. +++|+.+..+. +.+.... ..+ .+++
T Consensus 5 ~~irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~ 74 (331)
T 3c8m_A 5 KTINLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNERIDIGKVISYKEK----------GSLDSLEY 74 (331)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTTCCHHHHHHHHHT----------TCGGGCCS
T ss_pred cEEeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhcccChHHHhhhhcc----------CCcccccC
Confidence 347999999999999999999764 2114554 55676542211 1110000 011 1223
Q ss_pred ---CHHHhc-cCCcEEEEccChh----hHHHHHHHhhhcCCCCCeEEEeccC
Q 014700 192 ---DAKTAL-LGADYCLHAMPVQ----FSSSFLEGISDYVDPGLPFISLSKG 235 (420)
Q Consensus 192 ---d~~eal-~~aDiVIlaVp~~----~l~~vl~~i~~~l~~~~iVVs~snG 235 (420)
|+++.+ .+.|+|+.|+|.. ...+.+. ..+..++-||+..|.
T Consensus 75 ~~~d~~~ll~~~iDvVv~~t~~~~~~~~~~~~~~---~AL~aGkhVvtanK~ 123 (331)
T 3c8m_A 75 ESISASEALARDFDIVVDATPASADGKKELAFYK---ETFENGKDVVTANKS 123 (331)
T ss_dssp EECCHHHHHHSSCSEEEECSCCCSSSHHHHHHHH---HHHHTTCEEEECCCH
T ss_pred CCCCHHHHhCCCCCEEEECCCCCCccchHHHHHH---HHHHCCCeEEecCch
Confidence 777765 3689999999984 3333333 334467778766554
No 353
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=95.87 E-value=0.017 Score=52.75 Aligned_cols=73 Identities=18% Similarity=0.210 Sum_probs=48.8
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhc--CCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcE
Q 014700 126 RTNKVVVLGG-GSFGTAMAAHVANK--KSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADY 202 (420)
Q Consensus 126 ~~mkI~IIGa-GamG~alA~~La~a--G~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDi 202 (420)
.+|+|.|.|+ |.+|.+++..|++. | ++|++.+|+++..+.+ +....++.. .+.-..+++++++++|+
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g--~~V~~~~r~~~~~~~~---~~~~~~~~~-----D~~d~~~~~~~~~~~d~ 72 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDK--FVAKGLVRSAQGKEKI---GGEADVFIG-----DITDADSINPAFQGIDA 72 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTT--CEEEEEESCHHHHHHT---TCCTTEEEC-----CTTSHHHHHHHHTTCSE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCC--cEEEEEEcCCCchhhc---CCCeeEEEe-----cCCCHHHHHHHHcCCCE
Confidence 3689999995 99999999999998 6 8999999998765443 111111100 00001134456778999
Q ss_pred EEEccC
Q 014700 203 CLHAMP 208 (420)
Q Consensus 203 VIlaVp 208 (420)
||.+..
T Consensus 73 vi~~a~ 78 (253)
T 1xq6_A 73 LVILTS 78 (253)
T ss_dssp EEECCC
T ss_pred EEEecc
Confidence 998753
No 354
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=95.87 E-value=0.0069 Score=58.01 Aligned_cols=85 Identities=15% Similarity=0.239 Sum_probs=54.5
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCH------HHHHHHH---HhcCCCCCCCCCCCCCceEEeCCHHHh
Q 014700 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDP------AVCQSIN---EKHCNCRYFPEQKLPENVIATTDAKTA 196 (420)
Q Consensus 127 ~mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r~~------~~~~~i~---~~g~~~~~l~~~~l~~~i~a~td~~ea 196 (420)
+|+|.|+|+ |.+|.+++..|++.| ++|++.+|++ +..+.+. ..+. ..... .+.-..++.++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v--~~v~~-----D~~d~~~l~~a 74 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFS--HPTFIYARPLTPDSTPSSVQLREEFRSMGV--TIIEG-----EMEEHEKMVSV 74 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTT--CCEEEEECCCCTTCCHHHHHHHHHHHHTTC--EEEEC-----CTTCHHHHHHH
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCC--CcEEEEECCcccccChHHHHHHHHhhcCCc--EEEEe-----cCCCHHHHHHH
Confidence 679999996 999999999999998 8999999985 3333332 2221 11000 00001235567
Q ss_pred ccCCcEEEEccCh---hhHHHHHHHhh
Q 014700 197 LLGADYCLHAMPV---QFSSSFLEGIS 220 (420)
Q Consensus 197 l~~aDiVIlaVp~---~~l~~vl~~i~ 220 (420)
++++|+||.+... .....+++...
T Consensus 75 ~~~~d~vi~~a~~~~~~~~~~l~~aa~ 101 (321)
T 3c1o_A 75 LKQVDIVISALPFPMISSQIHIINAIK 101 (321)
T ss_dssp HTTCSEEEECCCGGGSGGGHHHHHHHH
T ss_pred HcCCCEEEECCCccchhhHHHHHHHHH
Confidence 8899999998764 23444554443
No 355
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=95.85 E-value=0.0035 Score=60.39 Aligned_cols=73 Identities=18% Similarity=0.199 Sum_probs=47.2
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEE
Q 014700 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (420)
Q Consensus 127 ~mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIl 205 (420)
+|||.|.|+ |.+|.+++..|++.| ++|++++|+++..+.+...+. .++.+ .+.-..+++++++++|+||.
T Consensus 13 ~M~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~l~~~~~--~~~~~-----Dl~d~~~~~~~~~~~d~vih 83 (342)
T 2x4g_A 13 HVKYAVLGATGLLGHHAARAIRAAG--HDLVLIHRPSSQIQRLAYLEP--ECRVA-----EMLDHAGLERALRGLDGVIF 83 (342)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT--CEEEEEECTTSCGGGGGGGCC--EEEEC-----CTTCHHHHHHHTTTCSEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC--CEEEEEecChHhhhhhccCCe--EEEEe-----cCCCHHHHHHHHcCCCEEEE
Confidence 579999995 999999999999998 999999998754333322111 10000 00001134456788999998
Q ss_pred ccC
Q 014700 206 AMP 208 (420)
Q Consensus 206 aVp 208 (420)
+..
T Consensus 84 ~a~ 86 (342)
T 2x4g_A 84 SAG 86 (342)
T ss_dssp C--
T ss_pred CCc
Confidence 764
No 356
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=95.82 E-value=0.0074 Score=58.65 Aligned_cols=86 Identities=13% Similarity=0.189 Sum_probs=54.9
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCH----HHHHHHH---HhcCCCCCCCCCCCCCceEEeCCHHHhcc
Q 014700 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDP----AVCQSIN---EKHCNCRYFPEQKLPENVIATTDAKTALL 198 (420)
Q Consensus 127 ~mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r~~----~~~~~i~---~~g~~~~~l~~~~l~~~i~a~td~~eal~ 198 (420)
+|+|.|.|+ |.+|.+++..|.+.| ++|++++|++ ++.+.+. ..+. ..+.+ .+ .-..++.++++
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g--~~V~~l~R~~~~~~~~~~~~~~l~~~~v--~~~~~-Dl----~d~~~l~~~~~ 80 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAH--RPTYILARPGPRSPSKAKIFKALEDKGA--IIVYG-LI----NEQEAMEKILK 80 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTT--CCEEEEECSSCCCHHHHHHHHHHHHTTC--EEEEC-CT----TCHHHHHHHHH
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCC--CCEEEEECCCCCChhHHHHHHHHHhCCc--EEEEe-ec----CCHHHHHHHHh
Confidence 579999998 999999999999998 9999999976 4444332 2221 11100 00 00123455677
Q ss_pred --CCcEEEEccChh---hHHHHHHHhhh
Q 014700 199 --GADYCLHAMPVQ---FSSSFLEGISD 221 (420)
Q Consensus 199 --~aDiVIlaVp~~---~l~~vl~~i~~ 221 (420)
++|+||.+.... ....+++.+..
T Consensus 81 ~~~~d~Vi~~a~~~n~~~~~~l~~aa~~ 108 (346)
T 3i6i_A 81 EHEIDIVVSTVGGESILDQIALVKAMKA 108 (346)
T ss_dssp HTTCCEEEECCCGGGGGGHHHHHHHHHH
T ss_pred hCCCCEEEECCchhhHHHHHHHHHHHHH
Confidence 999999988742 34455554433
No 357
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=95.81 E-value=0.007 Score=53.89 Aligned_cols=33 Identities=15% Similarity=0.273 Sum_probs=30.5
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCH
Q 014700 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (420)
Q Consensus 128 mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~ 162 (420)
..|+|||+|.-|.+.|..|+++| ++|+++++.+
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~G--~~V~v~Ek~~ 35 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAAG--HQVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT--CCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCC--CCEEEEECCC
Confidence 46999999999999999999999 9999999764
No 358
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=95.80 E-value=0.0026 Score=57.67 Aligned_cols=70 Identities=14% Similarity=0.237 Sum_probs=46.7
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEE-eCCHHHhccCCcEEEE
Q 014700 128 NKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIA-TTDAKTALLGADYCLH 205 (420)
Q Consensus 128 mkI~IIG-aGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a-~td~~eal~~aDiVIl 205 (420)
|||.|.| .|.+|..++..|++.| ++|++++|+++..+.+ .+ ..++. ..+.- ..+++++++++|+||.
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~--~~--~~~~~-----~D~~d~~~~~~~~~~~~d~vi~ 69 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTD--YQIYAGARKVEQVPQY--NN--VKAVH-----FDVDWTPEEMAKQLHGMDAIIN 69 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSS--CEEEEEESSGGGSCCC--TT--EEEEE-----CCTTSCHHHHHTTTTTCSEEEE
T ss_pred CeEEEECCCCHHHHHHHHHHHHCC--CEEEEEECCccchhhc--CC--ceEEE-----ecccCCHHHHHHHHcCCCEEEE
Confidence 6999999 6999999999999998 9999999997642211 00 00000 00000 1124455778999998
Q ss_pred ccC
Q 014700 206 AMP 208 (420)
Q Consensus 206 aVp 208 (420)
+..
T Consensus 70 ~ag 72 (219)
T 3dqp_A 70 VSG 72 (219)
T ss_dssp CCC
T ss_pred CCc
Confidence 875
No 359
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=95.79 E-value=0.0089 Score=57.80 Aligned_cols=35 Identities=23% Similarity=0.270 Sum_probs=31.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCH
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~ 162 (420)
..||.|||+|..|+.++..|+++|. -+++++|.+.
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aGV-G~i~lvD~D~ 70 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCGI-GKLLLFDYDK 70 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHTC-SEEEEECCCB
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCC-CEEEEECCCc
Confidence 4699999999999999999999995 5899999875
No 360
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=95.75 E-value=0.034 Score=57.01 Aligned_cols=92 Identities=13% Similarity=0.230 Sum_probs=62.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCC---HH-HhccCCcE
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTD---AK-TALLGADY 202 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td---~~-eal~~aDi 202 (420)
.++|.|+|+|.+|..+|..|.+ . ++|.+..+++++++.+.+.-.+...+.+. .+| ++ +-+.++|+
T Consensus 235 ~~~v~I~GgG~ig~~lA~~L~~-~--~~v~iIE~d~~r~~~la~~l~~~~Vi~GD--------~td~~~L~ee~i~~~D~ 303 (461)
T 4g65_A 235 YRRIMIVGGGNIGASLAKRLEQ-T--YSVKLIERNLQRAEKLSEELENTIVFCGD--------AADQELLTEENIDQVDV 303 (461)
T ss_dssp CCEEEEECCSHHHHHHHHHHTT-T--SEEEEEESCHHHHHHHHHHCTTSEEEESC--------TTCHHHHHHTTGGGCSE
T ss_pred ccEEEEEcchHHHHHHHHHhhh-c--CceEEEecCHHHHHHHHHHCCCceEEecc--------ccchhhHhhcCchhhcE
Confidence 5799999999999999999854 4 89999999999999998752211111110 012 22 23678999
Q ss_pred EEEccChhhHHHHHHHhhhcCCCCCeE
Q 014700 203 CLHAMPVQFSSSFLEGISDYVDPGLPF 229 (420)
Q Consensus 203 VIlaVp~~~l~~vl~~i~~~l~~~~iV 229 (420)
++.++..+..-=+...+++.+....++
T Consensus 304 ~ia~T~~De~Ni~~~llAk~~gv~kvI 330 (461)
T 4g65_A 304 FIALTNEDETNIMSAMLAKRMGAKKVM 330 (461)
T ss_dssp EEECCSCHHHHHHHHHHHHHTTCSEEE
T ss_pred EEEcccCcHHHHHHHHHHHHcCCcccc
Confidence 999999776444444445555444444
No 361
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=95.74 E-value=0.027 Score=53.87 Aligned_cols=42 Identities=17% Similarity=0.227 Sum_probs=36.3
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH
Q 014700 126 RTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSIN 169 (420)
Q Consensus 126 ~~mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~ 169 (420)
..|+|.|.|+ |.+|..++..|++.| ++|++.+|+.+..+.+.
T Consensus 10 ~~~~vlVTGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~ 52 (342)
T 1y1p_A 10 EGSLVLVTGANGFVASHVVEQLLEHG--YKVRGTARSASKLANLQ 52 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCC--CEEEEEeCCcccHHHHH
Confidence 3579999997 999999999999998 99999999987655443
No 362
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=95.68 E-value=0.0094 Score=56.52 Aligned_cols=75 Identities=21% Similarity=0.247 Sum_probs=49.6
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCHHHH--HHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcE
Q 014700 126 RTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVC--QSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADY 202 (420)
Q Consensus 126 ~~mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r~~~~~--~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDi 202 (420)
.+|+|.|.|+ |.+|.+++..|.+.| +++|++.+|+++.. +.+...+. .+..+ .+ .-..+++++++++|+
T Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g-~~~V~~~~R~~~~~~~~~l~~~~~--~~~~~-D~----~d~~~l~~~~~~~d~ 75 (299)
T 2wm3_A 4 DKKLVVVFGGTGAQGGSVARTLLEDG-TFKVRVVTRNPRKKAAKELRLQGA--EVVQG-DQ----DDQVIMELALNGAYA 75 (299)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHHC-SSEEEEEESCTTSHHHHHHHHTTC--EEEEC-CT----TCHHHHHHHHTTCSE
T ss_pred CCCEEEEECCCchHHHHHHHHHHhcC-CceEEEEEcCCCCHHHHHHHHCCC--EEEEe-cC----CCHHHHHHHHhcCCE
Confidence 3579999998 999999999999876 37999999986542 33333221 11000 00 001134566789999
Q ss_pred EEEccC
Q 014700 203 CLHAMP 208 (420)
Q Consensus 203 VIlaVp 208 (420)
||.+..
T Consensus 76 vi~~a~ 81 (299)
T 2wm3_A 76 TFIVTN 81 (299)
T ss_dssp EEECCC
T ss_pred EEEeCC
Confidence 999875
No 363
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=95.67 E-value=0.009 Score=59.45 Aligned_cols=105 Identities=24% Similarity=0.281 Sum_probs=59.8
Q ss_pred hcCCCeEEEEc-ccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCC--CCCCC-CCCCCCceEEeCCHHHhccC
Q 014700 124 LERTNKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCN--CRYFP-EQKLPENVIATTDAKTALLG 199 (420)
Q Consensus 124 ~~~~mkI~IIG-aGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~--~~~l~-~~~l~~~i~a~td~~eal~~ 199 (420)
|..++||+||| .|..|.-|.+.|.+.- ..++..+..+...-+.+.+.... ...++ +.. ...+.. .+.++ +.+
T Consensus 4 M~~~~kVaIvGATGyvG~eLlrlL~~hP-~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~-~~~v~~-~~~~~-~~~ 79 (359)
T 4dpl_A 4 MRRTLKAAILGATGLVGIEYVRMLSNHP-YIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIA-DMEIKP-TDPKL-MDD 79 (359)
T ss_dssp --CCEEEEETTTTSTTHHHHHHHHTTCS-SEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHH-TCBCEE-CCGGG-CTT
T ss_pred CCCCCeEEEECCCCHHHHHHHHHHHhCC-CceEEEEECchhcCCChhHhcccccccccccccc-cceEEe-CCHHH-hcC
Confidence 44457999999 5999999999887753 25666554222211222221100 00000 000 001121 23333 679
Q ss_pred CcEEEEccChhhHHHHHHHhhhcCCCCCeEEEeccC
Q 014700 200 ADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKG 235 (420)
Q Consensus 200 aDiVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snG 235 (420)
+|+||+|+|.....++...+.. .+..+|+++.-
T Consensus 80 vDvvf~a~p~~~s~~~a~~~~~---~G~~vIDlSa~ 112 (359)
T 4dpl_A 80 VDIIFSPLPQGAAGPVEEQFAK---EGFPVISNSPD 112 (359)
T ss_dssp CCEEEECCCTTTHHHHHHHHHH---TTCEEEECSST
T ss_pred CCEEEECCChHHHHHHHHHHHH---CCCEEEEcCCC
Confidence 9999999998887777766543 57888888753
No 364
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=95.67 E-value=0.009 Score=59.45 Aligned_cols=105 Identities=24% Similarity=0.281 Sum_probs=59.7
Q ss_pred hcCCCeEEEEc-ccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCC--CCCCC-CCCCCCceEEeCCHHHhccC
Q 014700 124 LERTNKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCN--CRYFP-EQKLPENVIATTDAKTALLG 199 (420)
Q Consensus 124 ~~~~mkI~IIG-aGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~--~~~l~-~~~l~~~i~a~td~~eal~~ 199 (420)
|..++||+||| .|..|.-|.+.|.+.- ..++..+..+...-+.+.+.... ...++ +.. ...+.. .+.++ +.+
T Consensus 4 M~~~~kVaIvGATGyvG~eLlrlL~~hP-~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~-~~~v~~-~~~~~-~~~ 79 (359)
T 4dpk_A 4 MRRTLKAAILGATGLVGIEYVRMLSNHP-YIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIA-DMEIKP-TDPKL-MDD 79 (359)
T ss_dssp --CCEEEEETTTTSTTHHHHHHHHTTCS-SEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHH-TCBCEE-CCGGG-CTT
T ss_pred CCCCCeEEEECCCCHHHHHHHHHHHhCC-CceEEEEECchhcCCChhHhcccccccccccccc-cceEEe-CCHHH-hcC
Confidence 44457999999 5999999999887753 25666554222211222221100 00000 000 001121 23333 679
Q ss_pred CcEEEEccChhhHHHHHHHhhhcCCCCCeEEEeccC
Q 014700 200 ADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKG 235 (420)
Q Consensus 200 aDiVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snG 235 (420)
+|+||+|+|.....++...+.. .+..+|+++.-
T Consensus 80 vDvvf~a~p~~~s~~~a~~~~~---~G~~vIDlSa~ 112 (359)
T 4dpk_A 80 VDIIFSPLPQGAAGPVEEQFAK---EGFPVISNSPD 112 (359)
T ss_dssp CCEEEECCCTTTHHHHHHHHHH---TTCEEEECSST
T ss_pred CCEEEECCChHHHHHHHHHHHH---CCCEEEEcCCC
Confidence 9999999998887777766543 57888888753
No 365
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=95.57 E-value=0.0098 Score=56.73 Aligned_cols=69 Identities=22% Similarity=0.245 Sum_probs=47.3
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEE
Q 014700 127 TNKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (420)
Q Consensus 127 ~mkI~IIG-aGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIl 205 (420)
+|||.|.| .|.+|..++..|.+.| ++|++++|++...+ +. +. .+. ...+. ..+++++++++|+||.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~-~~--~~--~~~-----~~Dl~-~~~~~~~~~~~d~Vih 68 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDG--NTPIILTRSIGNKA-IN--DY--EYR-----VSDYT-LEDLINQLNDVDAVVH 68 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCCC--------CC--EEE-----ECCCC-HHHHHHHTTTCSEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCC--CEEEEEeCCCCccc-CC--ce--EEE-----Ecccc-HHHHHHhhcCCCEEEE
Confidence 57999999 5999999999999998 99999999854333 32 11 110 01122 2346677889999998
Q ss_pred ccC
Q 014700 206 AMP 208 (420)
Q Consensus 206 aVp 208 (420)
+..
T Consensus 69 ~a~ 71 (311)
T 3m2p_A 69 LAA 71 (311)
T ss_dssp CCC
T ss_pred ccc
Confidence 753
No 366
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=95.56 E-value=0.086 Score=52.13 Aligned_cols=35 Identities=26% Similarity=0.433 Sum_probs=31.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCH
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~ 162 (420)
..+|.|||+|..|+.++..|+.+|. -+++++|++.
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGv-g~i~lvD~D~ 152 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGI-GEIILIDNDQ 152 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTC-SEEEEEECCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCC-CeEEEECCCc
Confidence 5799999999999999999999995 5899999863
No 367
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=95.55 E-value=0.04 Score=54.68 Aligned_cols=88 Identities=14% Similarity=0.080 Sum_probs=57.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhcc-CCcEEEE
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL-GADYCLH 205 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~-~aDiVIl 205 (420)
.++|+|+|.|++|..+|..|...| .+|+++|++++. ++..+.. +.... +.++.+. +||+++-
T Consensus 175 GktV~I~G~GnVG~~~A~~l~~~G--akVvvsD~~~~~-~~~a~~~-------------ga~~v-~~~ell~~~~DIliP 237 (355)
T 1c1d_A 175 GLTVLVQGLGAVGGSLASLAAEAG--AQLLVADTDTER-VAHAVAL-------------GHTAV-ALEDVLSTPCDVFAP 237 (355)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHH-HHHHHHT-------------TCEEC-CGGGGGGCCCSEEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHHCC--CEEEEEeCCccH-HHHHHhc-------------CCEEe-ChHHhhcCccceecH
Confidence 689999999999999999999988 899999998764 3333221 11222 4456666 8999985
Q ss_pred ccCh-hhHHHHHHHhhhcCCCCCeEEEeccCC
Q 014700 206 AMPV-QFSSSFLEGISDYVDPGLPFISLSKGL 236 (420)
Q Consensus 206 aVp~-~~l~~vl~~i~~~l~~~~iVVs~snGi 236 (420)
|--. ....+.++. ++ ..+|+...|+-
T Consensus 238 ~A~~~~I~~~~~~~----lk-~~iVie~AN~p 264 (355)
T 1c1d_A 238 CAMGGVITTEVART----LD-CSVVAGAANNV 264 (355)
T ss_dssp CSCSCCBCHHHHHH----CC-CSEECCSCTTC
T ss_pred hHHHhhcCHHHHhh----CC-CCEEEECCCCC
Confidence 4211 112222333 33 46777777764
No 368
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=95.54 E-value=0.01 Score=56.78 Aligned_cols=85 Identities=16% Similarity=0.225 Sum_probs=54.0
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCHH-HHH---HHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCc
Q 014700 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPA-VCQ---SINEKHCNCRYFPEQKLPENVIATTDAKTALLGAD 201 (420)
Q Consensus 127 ~mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r~~~-~~~---~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aD 201 (420)
+++|.|+|+ |.+|.+++..|.+.| ++|++++|++. ..+ .+...+.. .... .+ .-..++.++++++|
T Consensus 11 ~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~l~R~~~~~~~~~~~l~~~~v~--~v~~-Dl----~d~~~l~~a~~~~d 81 (318)
T 2r6j_A 11 KSKILIFGGTGYIGNHMVKGSLKLG--HPTYVFTRPNSSKTTLLDEFQSLGAI--IVKG-EL----DEHEKLVELMKKVD 81 (318)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTT--CCEEEEECTTCSCHHHHHHHHHTTCE--EEEC-CT----TCHHHHHHHHTTCS
T ss_pred CCeEEEECCCchHHHHHHHHHHHCC--CcEEEEECCCCchhhHHHHhhcCCCE--EEEe-cC----CCHHHHHHHHcCCC
Confidence 358999996 999999999999998 89999999863 222 22222211 1000 00 00123556788999
Q ss_pred EEEEccChh---hHHHHHHHhh
Q 014700 202 YCLHAMPVQ---FSSSFLEGIS 220 (420)
Q Consensus 202 iVIlaVp~~---~l~~vl~~i~ 220 (420)
+||.+.... ....+++.+.
T Consensus 82 ~vi~~a~~~~~~~~~~l~~aa~ 103 (318)
T 2r6j_A 82 VVISALAFPQILDQFKILEAIK 103 (318)
T ss_dssp EEEECCCGGGSTTHHHHHHHHH
T ss_pred EEEECCchhhhHHHHHHHHHHH
Confidence 999988742 3444554443
No 369
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=95.50 E-value=0.011 Score=58.36 Aligned_cols=91 Identities=21% Similarity=0.283 Sum_probs=54.5
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhcCC-CCeEEEEe-CCHHHHHHHHHhcCCCCCCCCCCCCCceEEe-CCHHHhccCCcE
Q 014700 127 TNKVVVLG-GGSFGTAMAAHVANKKS-QLKVYMLM-RDPAVCQSINEKHCNCRYFPEQKLPENVIAT-TDAKTALLGADY 202 (420)
Q Consensus 127 ~mkI~IIG-aGamG~alA~~La~aG~-~~~V~l~~-r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~-td~~eal~~aDi 202 (420)
+|||+|+| .|.+|..+.+.|.+.++ ..++..+. ++.. |.... +.+. .+.+. .++++ +.++|+
T Consensus 6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~--------g~~~~-~~g~----~i~~~~~~~~~-~~~~Dv 71 (340)
T 2hjs_A 6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESA--------GQRMG-FAES----SLRVGDVDSFD-FSSVGL 71 (340)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTT--------TCEEE-ETTE----EEECEEGGGCC-GGGCSE
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCC--------CCccc-cCCc----ceEEecCCHHH-hcCCCE
Confidence 47999999 69999999999986542 23555554 3211 10000 1110 11111 12322 568999
Q ss_pred EEEccChhhHHHHHHHhhhcCCCCCeEEEecc
Q 014700 203 CLHAMPVQFSSSFLEGISDYVDPGLPFISLSK 234 (420)
Q Consensus 203 VIlaVp~~~l~~vl~~i~~~l~~~~iVVs~sn 234 (420)
||+|+|.....+.+..+.. .+..+|.++.
T Consensus 72 V~~a~g~~~s~~~a~~~~~---aG~kvId~Sa 100 (340)
T 2hjs_A 72 AFFAAAAEVSRAHAERARA---AGCSVIDLSG 100 (340)
T ss_dssp EEECSCHHHHHHHHHHHHH---TTCEEEETTC
T ss_pred EEEcCCcHHHHHHHHHHHH---CCCEEEEeCC
Confidence 9999998776666665543 4666777653
No 370
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=95.48 E-value=0.005 Score=57.86 Aligned_cols=72 Identities=14% Similarity=0.232 Sum_probs=49.6
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhc--CCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEE
Q 014700 128 NKVVVLGG-GSFGTAMAAHVANK--KSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (420)
Q Consensus 128 mkI~IIGa-GamG~alA~~La~a--G~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVI 204 (420)
|+|.|.|+ |.+|..++..|.+. | ++|++++|+++..+.+...+. .+..+ .+.-..+++++++++|+||
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g--~~V~~~~r~~~~~~~l~~~~~--~~~~~-----D~~d~~~l~~~~~~~d~vi 71 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPA--SQIIAIVRNVEKASTLADQGV--EVRHG-----DYNQPESLQKAFAGVSKLL 71 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCG--GGEEEEESCTTTTHHHHHTTC--EEEEC-----CTTCHHHHHHHTTTCSEEE
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCC--CeEEEEEcCHHHHhHHhhcCC--eEEEe-----ccCCHHHHHHHHhcCCEEE
Confidence 58999997 99999999999998 7 999999998766555543221 11000 0000113456678899999
Q ss_pred EccC
Q 014700 205 HAMP 208 (420)
Q Consensus 205 laVp 208 (420)
.+..
T Consensus 72 ~~a~ 75 (287)
T 2jl1_A 72 FISG 75 (287)
T ss_dssp ECCC
T ss_pred EcCC
Confidence 8764
No 371
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=95.48 E-value=0.013 Score=58.44 Aligned_cols=93 Identities=19% Similarity=0.245 Sum_probs=57.7
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhcCC-CCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEe-CCHHHhccCCcEE
Q 014700 127 TNKVVVLG-GGSFGTAMAAHVANKKS-QLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIAT-TDAKTALLGADYC 203 (420)
Q Consensus 127 ~mkI~IIG-aGamG~alA~~La~aG~-~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~-td~~eal~~aDiV 203 (420)
++||+||| .|.+|.-|.+.|.+.++ ..++.++..... .|.... +.+. .+.+. .+. +.+.++|+|
T Consensus 2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~s-------aG~~~~-~~~~----~~~~~~~~~-~~~~~~Dvv 68 (366)
T 3pwk_A 2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARS-------AGKSLK-FKDQ----DITIEETTE-TAFEGVDIA 68 (366)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTT-------TTCEEE-ETTE----EEEEEECCT-TTTTTCSEE
T ss_pred CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEcccc-------CCCcce-ecCC----CceEeeCCH-HHhcCCCEE
Confidence 47999999 69999999999998652 124454443221 121111 1110 12221 122 236789999
Q ss_pred EEccChhhHHHHHHHhhhcCCCCCeEEEeccC
Q 014700 204 LHAMPVQFSSSFLEGISDYVDPGLPFISLSKG 235 (420)
Q Consensus 204 IlaVp~~~l~~vl~~i~~~l~~~~iVVs~snG 235 (420)
|+|+|.....+....+.+ .+..||+++.-
T Consensus 69 f~a~~~~~s~~~a~~~~~---~G~~vIDlSa~ 97 (366)
T 3pwk_A 69 LFSAGSSTSAKYAPYAVK---AGVVVVDNTSY 97 (366)
T ss_dssp EECSCHHHHHHHHHHHHH---TTCEEEECSST
T ss_pred EECCChHhHHHHHHHHHH---CCCEEEEcCCc
Confidence 999998877777766543 57788888754
No 372
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=95.39 E-value=0.019 Score=55.48 Aligned_cols=77 Identities=13% Similarity=0.137 Sum_probs=49.5
Q ss_pred cCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCH----HHHHHHHHhc-----CCCCCCCCCCCCCceEEeCCHH
Q 014700 125 ERTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDP----AVCQSINEKH-----CNCRYFPEQKLPENVIATTDAK 194 (420)
Q Consensus 125 ~~~mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r~~----~~~~~i~~~g-----~~~~~l~~~~l~~~i~a~td~~ 194 (420)
..+|+|.|.|+ |.+|..++..|.+.| ++|++++|.. +..+.+.... .+..++.+ .+.-..+++
T Consensus 23 ~~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----Dl~d~~~~~ 95 (351)
T 3ruf_A 23 FSPKTWLITGVAGFIGSNLLEKLLKLN--QVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEG-----DIRDLTTCE 95 (351)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEEC-----CTTCHHHHH
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCC--CEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEc-----cCCCHHHHH
Confidence 35689999995 999999999999998 9999999853 3444444311 01110000 000011345
Q ss_pred HhccCCcEEEEccC
Q 014700 195 TALLGADYCLHAMP 208 (420)
Q Consensus 195 eal~~aDiVIlaVp 208 (420)
++++++|+||.+..
T Consensus 96 ~~~~~~d~Vih~A~ 109 (351)
T 3ruf_A 96 QVMKGVDHVLHQAA 109 (351)
T ss_dssp HHTTTCSEEEECCC
T ss_pred HHhcCCCEEEECCc
Confidence 66779999998764
No 373
>2b0j_A 5,10-methenyltetrahydromethanopterin hydrogenase; rossmann fold, helix bundle, oxidoreductase; 1.75A {Methanocaldococcus jannaschii} SCOP: a.100.1.11 c.2.1.6 PDB: 3f47_A* 3daf_A* 3dag_A* 3f46_A* 3h65_A*
Probab=95.38 E-value=0.96 Score=43.33 Aligned_cols=164 Identities=15% Similarity=0.201 Sum_probs=97.7
Q ss_pred CceEEeCCHHHhccCCcEEEEccCh-hhHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCeEEEE
Q 014700 185 ENVIATTDAKTALLGADYCLHAMPV-QFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALS 263 (420)
Q Consensus 185 ~~i~a~td~~eal~~aDiVIlaVp~-~~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~~vl~ 263 (420)
.++++++|-.|+++++|++|+-+|- ....++++.+.++++++.+|.+.-. +.+- .+...+.. ++.. ++.+.+
T Consensus 127 aGVkVtsDD~EAvk~AEi~IlftPfG~~t~~Iakkii~~lpEgAII~nTCT-ipp~---~ly~~le~-l~R~--DvgIsS 199 (358)
T 2b0j_A 127 VGLKVTSDDREAVEGADIVITWLPKGNKQPDIIKKFADAIPEGAIVTHACT-IPTT---KFAKIFKD-LGRE--DLNITS 199 (358)
T ss_dssp GTCEEESCHHHHHTTCSEEEECCTTCTTHHHHHHHHGGGSCTTCEEEECSS-SCHH---HHHHHHHH-TTCT--TSEEEE
T ss_pred cCcEeecchHHHhcCCCEEEEecCCCCCcHHHHHHHHhhCcCCCEEecccC-CCHH---HHHHHHHH-hCcc--cCCeec
Confidence 3778999989999999999999995 4488899999999999998876543 5432 23344544 5542 333333
Q ss_pred C-cccHHHHhhcCCeEEEEecCCHHHHHHHHHHHhcCCceEEEc-CChhHHH--HHHHHHHHHHH-HHHHHHhcc-----
Q 014700 264 G-PSFALELMNKLPTAMVVASKDRKLANAVQQLLASKHLRISTS-SDVTGVE--IAGALKNVLAI-AAGIVVGMN----- 333 (420)
Q Consensus 264 G-P~~a~ev~~g~~t~i~ia~~d~e~~~~l~~ll~~~g~~v~~s-~Di~g~e--~~~alkNv~Ai-~~G~~~gl~----- 333 (420)
- |.-.-+. .|+ ...--+-.+++..+++.++-++.+...|.. .|+.+.. ++.++ .|+ .+|+++-..
T Consensus 200 ~HPaaVPgt-~Gq-~~~g~~yAtEEqIeklveLaksa~k~ay~vPAdl~SpV~DMgs~v---TAv~~AGiL~Y~~~vtkI 274 (358)
T 2b0j_A 200 YHPGCVPEM-KGQ-VYIAEGYASEEAVNKLYEIGKIARGKAFKMPANLIGPVCDMCSAV---TATVYAGLLAYRDAVTKI 274 (358)
T ss_dssp CBCSSCTTT-CCC-EEEEESSSCHHHHHHHHHHHHHHHSCEEEEEHHHHHHHHSTTHHH---HHHHHHHHHHHHHHHHTT
T ss_pred cCCCCCCCC-CCc-cccccccCCHHHHHHHHHHHHHhCCCeEecchhhccchhhhHHHH---HHHHHHHHHHHHHHHHHH
Confidence 2 2211111 222 111122346888999999999887666553 3443321 12211 111 234433221
Q ss_pred cc--hhHHHHHHHHHHHHHHHHHHHcCCC
Q 014700 334 LG--NNSMAALVAQGCSEIRWLATKMGAK 360 (420)
Q Consensus 334 lg--~N~~~al~~~~~~E~~~lA~a~Gi~ 360 (420)
++ ....-..+...+.-+..|-+..|++
T Consensus 275 lgAP~~mie~q~~esL~tiasLve~~GI~ 303 (358)
T 2b0j_A 275 LGAPADFAQMMADEALTQIHNLMKEKGIA 303 (358)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHHHHCGG
T ss_pred hcCcHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 22 1222345566778888888999985
No 374
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=95.38 E-value=0.022 Score=57.04 Aligned_cols=101 Identities=17% Similarity=0.294 Sum_probs=58.7
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhcCCCCeEEEE-eCCHHHHHHHHHhcCCCCCCCCCCCC-----CceEEeCCHHHhccC
Q 014700 127 TNKVVVLG-GGSFGTAMAAHVANKKSQLKVYML-MRDPAVCQSINEKHCNCRYFPEQKLP-----ENVIATTDAKTALLG 199 (420)
Q Consensus 127 ~mkI~IIG-aGamG~alA~~La~aG~~~~V~l~-~r~~~~~~~i~~~g~~~~~l~~~~l~-----~~i~a~td~~eal~~ 199 (420)
++||+||| .|..|.-|.+.|.+.- ..++..+ ......-+.+.+... ++.+..+| ..+... +.++.+.+
T Consensus 19 ~~kVaIvGAtG~vG~ell~lL~~hp-~~el~~l~aS~~saGk~~~~~~~---~~~~~~~p~~~~~~~v~~~-~~~~~~~~ 93 (381)
T 3hsk_A 19 VKKAGVLGATGSVGQRFILLLSKHP-EFEIHALGASSRSAGKKYKDAAS---WKQTETLPETEQDIVVQEC-KPEGNFLE 93 (381)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCS-SEEEEEEEECTTTTTSBHHHHCC---CCCSSCCCHHHHTCBCEES-SSCTTGGG
T ss_pred ccEEEEECCCChHHHHHHHHHHcCC-CceEEEeeccccccCCCHHHhcc---cccccccccccccceEEeC-chhhhccc
Confidence 46999999 5999999999998753 2466533 322211112222110 11111111 012221 22213578
Q ss_pred CcEEEEccChhhHHHHHHHhhhcCCCCCeEEEeccC
Q 014700 200 ADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSKG 235 (420)
Q Consensus 200 aDiVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snG 235 (420)
+|+||+|+|.....++...+.+ .+..||+++.-
T Consensus 94 ~Dvvf~alp~~~s~~~~~~~~~---~G~~VIDlSa~ 126 (381)
T 3hsk_A 94 CDVVFSGLDADVAGDIEKSFVE---AGLAVVSNAKN 126 (381)
T ss_dssp CSEEEECCCHHHHHHHHHHHHH---TTCEEEECCST
T ss_pred CCEEEECCChhHHHHHHHHHHh---CCCEEEEcCCc
Confidence 9999999999887777776643 57788887753
No 375
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=95.30 E-value=0.022 Score=57.19 Aligned_cols=96 Identities=16% Similarity=0.178 Sum_probs=62.1
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCH-------HHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCC
Q 014700 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP-------AVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGA 200 (420)
Q Consensus 128 mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~-------~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~a 200 (420)
.||.|+|+|+.|..+|..|...|. .+|+++|++- +.++.+++. |-.... + .....+++|+++++
T Consensus 189 ~kVVi~GAGaAG~~iA~ll~~~Ga-~~I~v~D~~Gli~~~R~~~L~~~k~~-----fa~~~~-~--~~~~~~L~eav~~A 259 (398)
T 2a9f_A 189 VSIVVNGGGSAGLSITRKLLAAGA-TKVTVVDKFGIINEQEAAQLAPHHLD-----IAKVTN-R--EFKSGTLEDALEGA 259 (398)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTC-CEEEEEETTEECCTTCCCSCCC---C-----HHHHHS-C--TTCCCSCSHHHHTT
T ss_pred cEEEEECCCHHHHHHHHHHHHcCC-CeEEEEECCCcccCCccccchHHHHH-----HhhccC-c--ccchhhHHHHhccC
Confidence 599999999999999999999982 3999999862 101110000 000000 0 00123688999999
Q ss_pred cEEEEccC-hhhHHHHHHHhhhcCCCCCeEEEeccCC
Q 014700 201 DYCLHAMP-VQFSSSFLEGISDYVDPGLPFISLSKGL 236 (420)
Q Consensus 201 DiVIlaVp-~~~l~~vl~~i~~~l~~~~iVVs~snGi 236 (420)
|++|=+.. .-..+++++.+ .++.+|+.++|-.
T Consensus 260 DV~IG~Sapgl~T~EmVk~M----a~~pIIfalsNPt 292 (398)
T 2a9f_A 260 DIFIGVSAPGVLKAEWISKM----AARPVIFAMANPI 292 (398)
T ss_dssp CSEEECCSTTCCCHHHHHTS----CSSCEEEECCSSS
T ss_pred CEEEecCCCCCCCHHHHHhh----CCCCEEEECCCCC
Confidence 99886643 33456666554 4788999999965
No 376
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=95.28 E-value=0.012 Score=57.94 Aligned_cols=92 Identities=14% Similarity=0.244 Sum_probs=56.4
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhcCC-CCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeC-CHHHhccCCcEE
Q 014700 127 TNKVVVLG-GGSFGTAMAAHVANKKS-QLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATT-DAKTALLGADYC 203 (420)
Q Consensus 127 ~mkI~IIG-aGamG~alA~~La~aG~-~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~t-d~~eal~~aDiV 203 (420)
+|||+|+| .|.+|..+.+.|.+.++ +.++..+..... .|.... +.+ ..+.+.. ++ +.+.++|+|
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~-------~G~~~~-~~~----~~i~~~~~~~-~~~~~vDvV 69 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERS-------EGKTYR-FNG----KTVRVQNVEE-FDWSQVHIA 69 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTT-------TTCEEE-ETT----EEEEEEEGGG-CCGGGCSEE
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCC-------CCCcee-ecC----ceeEEecCCh-HHhcCCCEE
Confidence 68999999 89999999999988631 256666552211 011000 111 0122211 22 234689999
Q ss_pred EEccChhhHHHHHHHhhhcCCCCCeEEEecc
Q 014700 204 LHAMPVQFSSSFLEGISDYVDPGLPFISLSK 234 (420)
Q Consensus 204 IlaVp~~~l~~vl~~i~~~l~~~~iVVs~sn 234 (420)
|+|+|.....+....+.. .+..+|+++.
T Consensus 70 f~a~g~~~s~~~a~~~~~---~G~~vId~s~ 97 (336)
T 2r00_A 70 LFSAGGELSAKWAPIAAE---AGVVVIDNTS 97 (336)
T ss_dssp EECSCHHHHHHHHHHHHH---TTCEEEECSS
T ss_pred EECCCchHHHHHHHHHHH---cCCEEEEcCC
Confidence 999998877666655443 5677887764
No 377
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=95.28 E-value=0.022 Score=54.34 Aligned_cols=98 Identities=19% Similarity=0.264 Sum_probs=62.6
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEE
Q 014700 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (420)
Q Consensus 126 ~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIl 205 (420)
..+++.|+|+|..+.+++..|++.|. .+|++++|+.++.+.+.+.-.. ..+ ........ +.++++|+||-
T Consensus 124 ~~~~~lilGaGGaarai~~aL~~~g~-~~i~i~nRt~~ra~~la~~~~~--~~~------~~~~~~~~-~~~~~~dliiN 193 (269)
T 3tum_A 124 AGKRALVIGCGGVGSAIAYALAEAGI-ASITLCDPSTARMGAVCELLGN--GFP------GLTVSTQF-SGLEDFDLVAN 193 (269)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC-SEEEEECSCHHHHHHHHHHHHH--HCT------TCEEESCC-SCSTTCSEEEE
T ss_pred ccCeEEEEecHHHHHHHHHHHHHhCC-CeEEEeCCCHHHHHHHHHHHhc--cCC------cceehhhh-hhhhccccccc
Confidence 35799999999999999999999883 5899999999988777653100 000 11222222 33678999999
Q ss_pred ccChhh--HH--HHHHHhhhcCCCCCeEEEec
Q 014700 206 AMPVQF--SS--SFLEGISDYVDPGLPFISLS 233 (420)
Q Consensus 206 aVp~~~--l~--~vl~~i~~~l~~~~iVVs~s 233 (420)
|+|.-- .. .+-......++++.++..+.
T Consensus 194 aTp~Gm~~~~~~p~~~~~~~~l~~~~~v~D~v 225 (269)
T 3tum_A 194 ASPVGMGTRAELPLSAALLATLQPDTLVADVV 225 (269)
T ss_dssp CSSTTCSTTCCCSSCHHHHHTCCTTSEEEECC
T ss_pred CCccccCCCCCCCCChHHHhccCCCcEEEEEc
Confidence 998421 00 01111223455677777764
No 378
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=95.28 E-value=0.063 Score=50.73 Aligned_cols=47 Identities=23% Similarity=0.332 Sum_probs=35.6
Q ss_pred hhhcCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHH
Q 014700 122 DILERTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (420)
Q Consensus 122 ~~~~~~mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~ 170 (420)
..|...+++.|.|+ |-+|.++|..|++.| ++|.+.+|+++..+.+.+
T Consensus 19 ~~m~~~k~~lVTGas~GIG~aia~~la~~G--~~V~~~~r~~~~~~~~~~ 66 (279)
T 3sju_A 19 SHMSRPQTAFVTGVSSGIGLAVARTLAARG--IAVYGCARDAKNVSAAVD 66 (279)
T ss_dssp ------CEEEEESTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHH
T ss_pred ccccCCCEEEEeCCCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH
Confidence 34555678899995 899999999999998 899999999887665544
No 379
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=95.27 E-value=0.074 Score=52.95 Aligned_cols=95 Identities=12% Similarity=0.217 Sum_probs=56.9
Q ss_pred CCeEEEEc-ccHHHHHHHH-HHHhcCC-CCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEE
Q 014700 127 TNKVVVLG-GGSFGTAMAA-HVANKKS-QLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (420)
Q Consensus 127 ~mkI~IIG-aGamG~alA~-~La~aG~-~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiV 203 (420)
|+||+|+| .|.+|..+.+ .|.+..+ ..++.++..+. . |.....+.+.. -.+....++++ +.++|+|
T Consensus 1 m~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s-~-------G~~v~~~~g~~--i~~~~~~~~~~-~~~~DvV 69 (367)
T 1t4b_A 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQ-L-------GQAAPSFGGTT--GTLQDAFDLEA-LKALDII 69 (367)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSS-T-------TSBCCGGGTCC--CBCEETTCHHH-HHTCSEE
T ss_pred CcEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCC-C-------CCCccccCCCc--eEEEecCChHH-hcCCCEE
Confidence 47999999 8999999999 5554431 12455555431 1 11111011111 11222234555 5789999
Q ss_pred EEccChhhHHHHHHHhhhcCCCCC--eEEEeccC
Q 014700 204 LHAMPVQFSSSFLEGISDYVDPGL--PFISLSKG 235 (420)
Q Consensus 204 IlaVp~~~l~~vl~~i~~~l~~~~--iVVs~snG 235 (420)
|.|+|.....+....+.. .+. +||+.+.-
T Consensus 70 f~a~g~~~s~~~a~~~~~---~G~k~vVID~ss~ 100 (367)
T 1t4b_A 70 VTCQGGDYTNEIYPKLRE---SGWQGYWIDAASS 100 (367)
T ss_dssp EECSCHHHHHHHHHHHHH---TTCCCEEEECSST
T ss_pred EECCCchhHHHHHHHHHH---CCCCEEEEcCChh
Confidence 999998877777766644 343 78887643
No 380
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=95.23 E-value=0.06 Score=55.12 Aligned_cols=89 Identities=17% Similarity=0.232 Sum_probs=65.8
Q ss_pred CCeEEEEccc----HHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcE
Q 014700 127 TNKVVVLGGG----SFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADY 202 (420)
Q Consensus 127 ~mkI~IIGaG----amG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDi 202 (420)
.++|+|||++ .+|..+...|.+.| ...|..++...+ .+ .++.+..+++++.+..|+
T Consensus 8 p~siAVvGas~~~~~~g~~v~~~l~~~g-~~~v~pVnP~~~---~i----------------~G~~~y~sl~~lp~~~Dl 67 (457)
T 2csu_A 8 PKGIAVIGASNDPKKLGYEVFKNLKEYK-KGKVYPVNIKEE---EV----------------QGVKAYKSVKDIPDEIDL 67 (457)
T ss_dssp CSEEEEETCCSCTTSHHHHHHHHHTTCC-SSEEEEECSSCS---EE----------------TTEECBSSTTSCSSCCSE
T ss_pred CCeEEEECcCCCCCchHHHHHHHHHHcC-CCEEEEECCCCC---eE----------------CCEeccCCHHHcCCCCCE
Confidence 5799999998 89999999998875 478877765421 11 134555677776667999
Q ss_pred EEEccChhhHHHHHHHhhhcCCCCCeEEEeccCCC
Q 014700 203 CLHAMPVQFSSSFLEGISDYVDPGLPFISLSKGLE 237 (420)
Q Consensus 203 VIlaVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~ 237 (420)
+++++|.....++++++... . =..+|.++.|+.
T Consensus 68 avi~vp~~~~~~~v~e~~~~-G-i~~vv~~s~G~~ 100 (457)
T 2csu_A 68 AIIVVPKRFVKDTLIQCGEK-G-VKGVVIITAGFG 100 (457)
T ss_dssp EEECSCHHHHHHHHHHHHHH-T-CCEEEECCCSST
T ss_pred EEEecCHHHHHHHHHHHHHc-C-CCEEEEecCCCC
Confidence 99999999999999887654 1 134666788884
No 381
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=95.20 E-value=0.036 Score=52.82 Aligned_cols=74 Identities=26% Similarity=0.265 Sum_probs=49.9
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceE-EeCC---HHHhccCCc
Q 014700 127 TNKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVI-ATTD---AKTALLGAD 201 (420)
Q Consensus 127 ~mkI~IIG-aGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~-a~td---~~eal~~aD 201 (420)
.+++.|+| +|.+|.+++..|++.| .+|++++|+.++.+.+.+.-.. . .+.. -+. -.++ .+++++++|
T Consensus 119 gk~vlVtGaaGGiG~aia~~L~~~G--~~V~i~~R~~~~~~~l~~~~~~-~--~~~~---~~~~D~~~~~~~~~~~~~~D 190 (287)
T 1lu9_A 119 GKKAVVLAGTGPVGMRSAALLAGEG--AEVVLCGRKLDKAQAAADSVNK-R--FKVN---VTAAETADDASRAEAVKGAH 190 (287)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHHHHHH-H--HTCC---CEEEECCSHHHHHHHTTTCS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCc--CEEEEEECCHHHHHHHHHHHHh-c--CCcE---EEEecCCCHHHHHHHHHhCC
Confidence 57899999 9999999999999998 7899999998776655432100 0 0000 011 1112 345566788
Q ss_pred EEEEccC
Q 014700 202 YCLHAMP 208 (420)
Q Consensus 202 iVIlaVp 208 (420)
+||-+.+
T Consensus 191 vlVn~ag 197 (287)
T 1lu9_A 191 FVFTAGA 197 (287)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 8888876
No 382
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=95.18 E-value=0.059 Score=53.42 Aligned_cols=103 Identities=14% Similarity=0.095 Sum_probs=58.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeC---CHHHHHHHHH-hcCCCCCCCCC-----CC--C-CceEEe--CC
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMR---DPAVCQSINE-KHCNCRYFPEQ-----KL--P-ENVIAT--TD 192 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r---~~~~~~~i~~-~g~~~~~l~~~-----~l--~-~~i~a~--td 192 (420)
++||+|+|+|.+|.-+.+.|.+.. +.+|..+.- +.+....+.+ .....++.... .+ . ..+.+. .|
T Consensus 17 ~ikVgI~G~G~iGr~llR~l~~~p-~veivaindp~~~~~~~a~ll~~ds~hg~~~~~v~~~~~~l~v~g~~i~v~~~~d 95 (354)
T 3cps_A 17 QGTLGINGFGRIGRLVLRACMERN-DITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEVSGKDLCINGKVVKVFQAKD 95 (354)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTCS-SCEEEEEECTTSCHHHHHHHHHCCTTTCSCSSCEEECC-CEEETTEEEEEECCSC
T ss_pred ceEEEEECCCHHHHHHHHHHHcCC-CeEEEEecCCCCChhHhhhhhcccccCCCCCCcEEEeCCEEEECCeEEEEEecCC
Confidence 579999999999999999998763 367765542 2332223322 11111111111 11 0 123233 25
Q ss_pred HHHhc---cCCcEEEEccChhhHHHHHHHhhhcCCCCC--eEEEec
Q 014700 193 AKTAL---LGADYCLHAMPVQFSSSFLEGISDYVDPGL--PFISLS 233 (420)
Q Consensus 193 ~~eal---~~aDiVIlaVp~~~l~~vl~~i~~~l~~~~--iVVs~s 233 (420)
+++.. .++|+||.|+|.....+... .+++.+. +||+..
T Consensus 96 p~~i~w~~~~vDvV~eatg~~~s~e~a~---~~l~~GakkvVId~p 138 (354)
T 3cps_A 96 PAEIPWGASGAQIVCESTGVFTTEEKAS---LHLKGGAKKVIISAP 138 (354)
T ss_dssp GGGCCHHHHTCCEEEECSSSCCSHHHHG---GGGTTTCSEEEESSC
T ss_pred hHHCCcccCCCCEEEECCCchhhHHHHH---HHHHcCCcEEEEeCC
Confidence 65531 47999999999776655444 3444555 777664
No 383
>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A
Probab=95.18 E-value=0.1 Score=51.92 Aligned_cols=93 Identities=12% Similarity=0.175 Sum_probs=56.9
Q ss_pred CeEEEEcc-cHHHHHHHH-HHHhcCC-CCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEE
Q 014700 128 NKVVVLGG-GSFGTAMAA-HVANKKS-QLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (420)
Q Consensus 128 mkI~IIGa-GamG~alA~-~La~aG~-~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVI 204 (420)
|||+|||+ |++|.-|.+ .|.+..+ ..++.++..+.. |.....+.+.. ..+...+++++ +.++|+||
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~a--------G~~~~~~~~~~--~~~~~~~~~~~-~~~~Dvvf 69 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQI--------GVPAPNFGKDA--GMLHDAFDIES-LKQLDAVI 69 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSST--------TSBCCCSSSCC--CBCEETTCHHH-HTTCSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEecccc--------CcCHHHhCCCc--eEEEecCChhH-hccCCEEE
Confidence 69999996 999999999 7776431 135555543211 21111122211 12233334544 68999999
Q ss_pred EccChhhHHHHHHHhhhcCCCC--CeEEEecc
Q 014700 205 HAMPVQFSSSFLEGISDYVDPG--LPFISLSK 234 (420)
Q Consensus 205 laVp~~~l~~vl~~i~~~l~~~--~iVVs~sn 234 (420)
+|+|.....+....+.. .+ .+||+.+.
T Consensus 70 ~a~~~~~s~~~~~~~~~---~G~k~~VID~ss 98 (370)
T 3pzr_A 70 TCQGGSYTEKVYPALRQ---AGWKGYWIDAAS 98 (370)
T ss_dssp ECSCHHHHHHHHHHHHH---TTCCCEEEECSS
T ss_pred ECCChHHHHHHHHHHHH---CCCCEEEEeCCc
Confidence 99998887777766543 34 47888764
No 384
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=95.14 E-value=0.017 Score=54.36 Aligned_cols=36 Identities=22% Similarity=0.381 Sum_probs=33.0
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHH
Q 014700 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPA 163 (420)
Q Consensus 126 ~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~ 163 (420)
.+|||.|.|+|.+|..++..|.+.| ++|++++|+++
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~g--~~V~~~~r~~~ 37 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQG--HEVTGLRRSAQ 37 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTT--CCEEEEECTTS
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCcc
Confidence 3689999999999999999999998 99999999864
No 385
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=95.07 E-value=0.097 Score=48.67 Aligned_cols=42 Identities=14% Similarity=0.124 Sum_probs=36.2
Q ss_pred CCeEEEEcc-c-HHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHH
Q 014700 127 TNKVVVLGG-G-SFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (420)
Q Consensus 127 ~mkI~IIGa-G-amG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~ 170 (420)
.++|.|.|+ | .+|.++|..|++.| ++|++.+|+.+..+.+.+
T Consensus 22 ~k~vlITGasg~GIG~~~a~~l~~~G--~~V~~~~r~~~~~~~~~~ 65 (266)
T 3o38_A 22 GKVVLVTAAAGTGIGSTTARRALLEG--ADVVISDYHERRLGETRD 65 (266)
T ss_dssp TCEEEESSCSSSSHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCCCCchHHHHHHHHHHCC--CEEEEecCCHHHHHHHHH
Confidence 468999998 8 59999999999998 899999999887665544
No 386
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=94.97 E-value=0.047 Score=53.28 Aligned_cols=77 Identities=26% Similarity=0.453 Sum_probs=51.4
Q ss_pred cCCCeEEEEcc-cHHHHHHHHHHHhc-CCCC-eEEEEeCCHHHHHHHHHhcC--CCCCCCCCCCCCceEEeCCHHHhccC
Q 014700 125 ERTNKVVVLGG-GSFGTAMAAHVANK-KSQL-KVYMLMRDPAVCQSINEKHC--NCRYFPEQKLPENVIATTDAKTALLG 199 (420)
Q Consensus 125 ~~~mkI~IIGa-GamG~alA~~La~a-G~~~-~V~l~~r~~~~~~~i~~~g~--~~~~l~~~~l~~~i~a~td~~eal~~ 199 (420)
...|+|.|.|+ |.+|.+++..|++. | + +|++++|++...+.+.+.-. ...++. ..+.-..++++++++
T Consensus 19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g--~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~-----~Dl~d~~~l~~~~~~ 91 (344)
T 2gn4_A 19 LDNQTILITGGTGSFGKCFVRKVLDTTN--AKKIIVYSRDELKQSEMAMEFNDPRMRFFI-----GDVRDLERLNYALEG 91 (344)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHHCC--CSEEEEEESCHHHHHHHHHHHCCTTEEEEE-----CCTTCHHHHHHHTTT
T ss_pred hCCCEEEEECCCcHHHHHHHHHHHhhCC--CCEEEEEECChhhHHHHHHHhcCCCEEEEE-----CCCCCHHHHHHHHhc
Confidence 34589999995 99999999999998 8 6 99999999887666554210 101000 000001124456778
Q ss_pred CcEEEEccC
Q 014700 200 ADYCLHAMP 208 (420)
Q Consensus 200 aDiVIlaVp 208 (420)
+|+||.+..
T Consensus 92 ~D~Vih~Aa 100 (344)
T 2gn4_A 92 VDICIHAAA 100 (344)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCC
Confidence 999998763
No 387
>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}
Probab=94.89 E-value=0.13 Score=51.49 Aligned_cols=94 Identities=11% Similarity=0.165 Sum_probs=57.4
Q ss_pred CCeEEEEcc-cHHHHHHHH-HHHhcCC-CCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEE
Q 014700 127 TNKVVVLGG-GSFGTAMAA-HVANKKS-QLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (420)
Q Consensus 127 ~mkI~IIGa-GamG~alA~-~La~aG~-~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiV 203 (420)
.+||+|||+ |.+|.-|.+ .|.+..+ ..++.++..+. .|.....+.+.. ..+...+++++ +.++|+|
T Consensus 4 ~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~--------aG~~~~~~~~~~--~~v~~~~~~~~-~~~vDvv 72 (377)
T 3uw3_A 4 SMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTSN--------AGGKAPSFAKNE--TTLKDATSIDD-LKKCDVI 72 (377)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSC--------TTSBCCTTCCSC--CBCEETTCHHH-HHTCSEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEechh--------cCCCHHHcCCCc--eEEEeCCChhH-hcCCCEE
Confidence 579999996 999999999 7776431 13555554321 121111122211 12232334444 5789999
Q ss_pred EEccChhhHHHHHHHhhhcCCCC--CeEEEecc
Q 014700 204 LHAMPVQFSSSFLEGISDYVDPG--LPFISLSK 234 (420)
Q Consensus 204 IlaVp~~~l~~vl~~i~~~l~~~--~iVVs~sn 234 (420)
|+|+|.....++...+.. .+ .+||+.+.
T Consensus 73 f~a~~~~~s~~~~~~~~~---~G~k~~VID~ss 102 (377)
T 3uw3_A 73 ITCQGGDYTNDVFPKLRA---AGWNGYWIDAAS 102 (377)
T ss_dssp EECSCHHHHHHHHHHHHH---TTCCSEEEECSS
T ss_pred EECCChHHHHHHHHHHHH---CCCCEEEEeCCc
Confidence 999998887777766543 35 37888774
No 388
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=94.89 E-value=0.027 Score=54.91 Aligned_cols=34 Identities=41% Similarity=0.571 Sum_probs=31.0
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCC
Q 014700 126 RTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRD 161 (420)
Q Consensus 126 ~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~ 161 (420)
...+|.|||+|.+|.+.|..|++.| ++|+++++.
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~G--~~V~vle~~ 38 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARKG--YSVHILARD 38 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCC--CEEEEEecc
Confidence 3468999999999999999999998 899999975
No 389
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=94.84 E-value=0.084 Score=49.17 Aligned_cols=42 Identities=21% Similarity=0.331 Sum_probs=35.8
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHH
Q 014700 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (420)
Q Consensus 127 ~mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~ 170 (420)
.++|.|.|+ |.+|.++|..|++.| ++|.+.+|+.+..+.+.+
T Consensus 29 ~k~vlITGas~gIG~~la~~l~~~G--~~V~~~~r~~~~~~~~~~ 71 (262)
T 3rkr_A 29 GQVAVVTGASRGIGAAIARKLGSLG--ARVVLTARDVEKLRAVER 71 (262)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHH
Confidence 367888885 999999999999998 899999999887666544
No 390
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=94.82 E-value=0.0095 Score=58.29 Aligned_cols=39 Identities=18% Similarity=0.348 Sum_probs=33.7
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhc-CCCCeEEEEeCCHHHHH
Q 014700 126 RTNKVVVLGG-GSFGTAMAAHVANK-KSQLKVYMLMRDPAVCQ 166 (420)
Q Consensus 126 ~~mkI~IIGa-GamG~alA~~La~a-G~~~~V~l~~r~~~~~~ 166 (420)
.+|||.|.|+ |.+|..++..|.+. | ++|++++|+.+...
T Consensus 23 ~~~~vlVtGatG~iG~~l~~~L~~~~g--~~V~~~~r~~~~~~ 63 (372)
T 3slg_A 23 KAKKVLILGVNGFIGHHLSKRILETTD--WEVFGMDMQTDRLG 63 (372)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHHSS--CEEEEEESCCTTTG
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCC--CEEEEEeCChhhhh
Confidence 3689999995 99999999999998 7 99999999875433
No 391
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=94.80 E-value=0.052 Score=52.95 Aligned_cols=87 Identities=17% Similarity=0.155 Sum_probs=61.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEEc
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLHA 206 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIla 206 (420)
..+|.|+|+|.+|.+.+..+...| .+|+..++++++.+.+++.|... + + .+.++..+..|+||-+
T Consensus 177 g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~~lGa~~-----------v-~-~~~~~~~~~~D~vid~ 241 (348)
T 3two_A 177 GTKVGVAGFGGLGSMAVKYAVAMG--AEVSVFARNEHKKQDALSMGVKH-----------F-Y-TDPKQCKEELDFIIST 241 (348)
T ss_dssp TCEEEEESCSHHHHHHHHHHHHTT--CEEEEECSSSTTHHHHHHTTCSE-----------E-E-SSGGGCCSCEEEEEEC
T ss_pred CCEEEEECCcHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHHHhcCCCe-----------e-c-CCHHHHhcCCCEEEEC
Confidence 468999999999999888888777 79999999988888777755321 1 1 3444433478999999
Q ss_pred cChh-hHHHHHHHhhhcCCCCCeEEEe
Q 014700 207 MPVQ-FSSSFLEGISDYVDPGLPFISL 232 (420)
Q Consensus 207 Vp~~-~l~~vl~~i~~~l~~~~iVVs~ 232 (420)
+... .+...++.+ +++-.++.+
T Consensus 242 ~g~~~~~~~~~~~l----~~~G~iv~~ 264 (348)
T 3two_A 242 IPTHYDLKDYLKLL----TYNGDLALV 264 (348)
T ss_dssp CCSCCCHHHHHTTE----EEEEEEEEC
T ss_pred CCcHHHHHHHHHHH----hcCCEEEEE
Confidence 9876 565555443 344444444
No 392
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=94.76 E-value=0.069 Score=55.80 Aligned_cols=43 Identities=5% Similarity=0.189 Sum_probs=39.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHh
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK 171 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~ 171 (420)
.++|.|+|+|.+|..++..|.+.| ++|++++.+++.++.+.+.
T Consensus 127 ~~hviI~G~g~~g~~la~~L~~~~--~~vvvid~~~~~~~~~~~~ 169 (565)
T 4gx0_A 127 RGHILIFGIDPITRTLIRKLESRN--HLFVVVTDNYDQALHLEEQ 169 (565)
T ss_dssp CSCEEEESCCHHHHHHHHHTTTTT--CCEEEEESCHHHHHHHHHS
T ss_pred CCeEEEECCChHHHHHHHHHHHCC--CCEEEEECCHHHHHHHHHh
Confidence 468999999999999999999988 8999999999998888875
No 393
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=94.75 E-value=0.022 Score=58.08 Aligned_cols=35 Identities=23% Similarity=0.330 Sum_probs=31.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHH
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPA 163 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~ 163 (420)
|++|.|||+|.-|.+-|..|+++| ++|+++.+++.
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~~G--~~V~VlEa~~~ 35 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQAAG--IPVLLLEQRDK 35 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHHTT--CCEEEECCC--
T ss_pred CCCEEEECCcHHHHHHHHHHHHCC--CcEEEEccCCC
Confidence 689999999999999999999999 99999987653
No 394
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=94.73 E-value=0.013 Score=54.92 Aligned_cols=71 Identities=15% Similarity=0.260 Sum_probs=47.8
Q ss_pred eEEEEcc-cHHHHHHHHHHHhc--CCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEE
Q 014700 129 KVVVLGG-GSFGTAMAAHVANK--KSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (420)
Q Consensus 129 kI~IIGa-GamG~alA~~La~a--G~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIl 205 (420)
||.|.|+ |.+|.+++..|.+. | ++|++.+|+++..+.+...+. .+... .+.-..+++++++++|+||.
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g--~~V~~~~r~~~~~~~~~~~~~--~~~~~-----D~~d~~~~~~~~~~~d~vi~ 71 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPA--SQIVAIVRNPAKAQALAAQGI--TVRQA-----DYGDEAALTSALQGVEKLLL 71 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCG--GGEEEEESCTTTCHHHHHTTC--EEEEC-----CTTCHHHHHHHTTTCSEEEE
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCC--ceEEEEEcChHhhhhhhcCCC--eEEEc-----CCCCHHHHHHHHhCCCEEEE
Confidence 5889997 99999999999998 7 999999998765555543321 11000 00001134566788999998
Q ss_pred ccC
Q 014700 206 AMP 208 (420)
Q Consensus 206 aVp 208 (420)
+..
T Consensus 72 ~a~ 74 (286)
T 2zcu_A 72 ISS 74 (286)
T ss_dssp CC-
T ss_pred eCC
Confidence 764
No 395
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=94.69 E-value=0.25 Score=49.24 Aligned_cols=99 Identities=21% Similarity=0.139 Sum_probs=61.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhc--cCCcEE
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL--LGADYC 203 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~-~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal--~~aDiV 203 (420)
..+|.|+|+|.+|.+.+..+...| . .|+..++++++.+.+++.|....+... .-.....+.+.. .++|+|
T Consensus 214 g~~VlV~GaG~vG~~aiqlak~~G--a~~Vi~~~~~~~~~~~~~~lGa~~vi~~~-----~~~~~~~i~~~t~g~g~D~v 286 (404)
T 3ip1_A 214 GDNVVILGGGPIGLAAVAILKHAG--ASKVILSEPSEVRRNLAKELGADHVIDPT-----KENFVEAVLDYTNGLGAKLF 286 (404)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT--CSEEEEECSCHHHHHHHHHHTCSEEECTT-----TSCHHHHHHHHTTTCCCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcC--CCEEEEECCCHHHHHHHHHcCCCEEEcCC-----CCCHHHHHHHHhCCCCCCEE
Confidence 358999999999998888887777 6 899999999888888776642110000 000000111222 258999
Q ss_pred EEccChh--hHHHHHHHhhhcCCCCCeEEEe
Q 014700 204 LHAMPVQ--FSSSFLEGISDYVDPGLPFISL 232 (420)
Q Consensus 204 IlaVp~~--~l~~vl~~i~~~l~~~~iVVs~ 232 (420)
|-++... ....+++.+...++++..++.+
T Consensus 287 id~~g~~~~~~~~~~~~l~~~~~~~G~iv~~ 317 (404)
T 3ip1_A 287 LEATGVPQLVWPQIEEVIWRARGINATVAIV 317 (404)
T ss_dssp EECSSCHHHHHHHHHHHHHHCSCCCCEEEEC
T ss_pred EECCCCcHHHHHHHHHHHHhccCCCcEEEEe
Confidence 9999866 3444444442333555555544
No 396
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=94.66 E-value=0.01 Score=54.29 Aligned_cols=74 Identities=19% Similarity=0.245 Sum_probs=47.1
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHhcCCCC--eEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcE
Q 014700 126 RTNKVVVLG-GGSFGTAMAAHVANKKSQL--KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADY 202 (420)
Q Consensus 126 ~~mkI~IIG-aGamG~alA~~La~aG~~~--~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDi 202 (420)
..|+|.|.| .|.+|.+++..|++.| + +|++++|+++..+.....+. .++ ...+.-..+.+++++++|+
T Consensus 17 ~~~~vlVtGasg~iG~~l~~~L~~~G--~~~~V~~~~r~~~~~~~~~~~~~--~~~-----~~D~~d~~~~~~~~~~~d~ 87 (242)
T 2bka_A 17 QNKSVFILGASGETGRVLLKEILEQG--LFSKVTLIGRRKLTFDEEAYKNV--NQE-----VVDFEKLDDYASAFQGHDV 87 (242)
T ss_dssp TCCEEEEECTTSHHHHHHHHHHHHHT--CCSEEEEEESSCCCCCSGGGGGC--EEE-----ECCGGGGGGGGGGGSSCSE
T ss_pred cCCeEEEECCCcHHHHHHHHHHHcCC--CCCEEEEEEcCCCCccccccCCc--eEE-----ecCcCCHHHHHHHhcCCCE
Confidence 357999999 5999999999999998 8 99999998653221111110 000 0000001234455678999
Q ss_pred EEEccC
Q 014700 203 CLHAMP 208 (420)
Q Consensus 203 VIlaVp 208 (420)
||.+..
T Consensus 88 vi~~ag 93 (242)
T 2bka_A 88 GFCCLG 93 (242)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 998875
No 397
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=94.62 E-value=0.11 Score=51.23 Aligned_cols=93 Identities=13% Similarity=0.134 Sum_probs=53.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcC-CCCeEEEE-eC-CHHHHHHHHHhc-CCCCCCCCC-----CC--C-CceEE--eCC
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKK-SQLKVYML-MR-DPAVCQSINEKH-CNCRYFPEQ-----KL--P-ENVIA--TTD 192 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG-~~~~V~l~-~r-~~~~~~~i~~~g-~~~~~l~~~-----~l--~-~~i~a--~td 192 (420)
++||+|+|+|.+|..+.+.|.+.+ .+.+|..+ ++ +.+....+.+.. ...++.... .+ . ..+.+ ..|
T Consensus 2 ~ikVgI~G~G~IGr~v~r~l~~~~~~~~evvaInd~~~~~~~~~l~~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~d 81 (339)
T 3b1j_A 2 TIRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLEYDSVLGRFNADISYDENSITVNGKTMKIVCDRN 81 (339)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSCCSEEEEEEECSSCHHHHHHHHHCCTTTCCCCSCEEEETTEEEETTEEEEEECCSC
T ss_pred ceEEEEECCCHHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHhccccccCCCCCcEEEcCCeeeecCceEEEEecCC
Confidence 369999999999999999998761 13566544 33 555555544321 111111111 11 1 12232 346
Q ss_pred HHHhc---cCCcEEEEccChhhHHHHHHHh
Q 014700 193 AKTAL---LGADYCLHAMPVQFSSSFLEGI 219 (420)
Q Consensus 193 ~~eal---~~aDiVIlaVp~~~l~~vl~~i 219 (420)
+++.. .++|+||.|++.....+.....
T Consensus 82 p~~l~w~~~~vDvV~e~tg~~~s~e~a~~~ 111 (339)
T 3b1j_A 82 PLNLPWKEWDIDLVIESTGVFVTAEGASKH 111 (339)
T ss_dssp GGGSCTTTTTCCEEEECSSSCCBHHHHHHH
T ss_pred hHHCcccccCCCEEEECCCccccHHHHHHH
Confidence 66632 2789999999976555544443
No 398
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=94.62 E-value=0.029 Score=48.90 Aligned_cols=34 Identities=35% Similarity=0.458 Sum_probs=31.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCH
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~ 162 (420)
|++|.|||+|..|..+|..|++.| .+|+++++.+
T Consensus 1 ~~~vvIIGgG~~Gl~~A~~l~~~g--~~v~lie~~~ 34 (180)
T 2ywl_A 1 MWDVIVVGGGPSGLSAALFLARAG--LKVLVLDGGR 34 (180)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTT--CCEEEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC--CcEEEEeCCC
Confidence 358999999999999999999998 8999999875
No 399
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=94.61 E-value=0.027 Score=54.26 Aligned_cols=34 Identities=24% Similarity=0.319 Sum_probs=31.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCH
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~ 162 (420)
..+|.|||+|..|.+.|..|++.| ++|+++++.+
T Consensus 4 ~~dvvIIG~G~~Gl~~A~~La~~G--~~V~vlE~~~ 37 (369)
T 3dme_A 4 DIDCIVIGAGVVGLAIARALAAGG--HEVLVAEAAE 37 (369)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTT--CCEEEECSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCC--CeEEEEeCCC
Confidence 458999999999999999999998 8999999864
No 400
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=94.61 E-value=0.14 Score=50.29 Aligned_cols=103 Identities=18% Similarity=0.173 Sum_probs=57.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHh---cCCCCeEEEEe-C-CHHHHHHHHHhc-CCCCCCCCC-----CC---CCceEEe--
Q 014700 127 TNKVVVLGGGSFGTAMAAHVAN---KKSQLKVYMLM-R-DPAVCQSINEKH-CNCRYFPEQ-----KL---PENVIAT-- 190 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~---aG~~~~V~l~~-r-~~~~~~~i~~~g-~~~~~l~~~-----~l---~~~i~a~-- 190 (420)
++||+|+|+|.+|..+.+.|.+ .. +.+|.... + +.+....+.+.. ...++.... .+ ...+.+.
T Consensus 2 ~ikVgI~G~G~iGr~l~r~l~~~~~~~-~~eivai~~~~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~ 80 (339)
T 2x5j_O 2 TVRVAINGFGRIGRNVVRALYESGRRA-EITVVAINELADAAGMAHLLKYDTSHGRFAWEVRQERDQLFVGDDAIRVLHE 80 (339)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTSGGG-TEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECC
T ss_pred CeEEEEECcCHHHHHHHHHHHcCCCCC-CEEEEEEeCCCCHHHHHHHhcccccCCCCCceEEEcCCeeEECCEEEEEEec
Confidence 3699999999999999999987 42 25665443 3 455544444311 111111110 01 1123333
Q ss_pred CCHHHhc-c--CCcEEEEccChhhHHHHHHHhhhcCCCCC--eEEEec
Q 014700 191 TDAKTAL-L--GADYCLHAMPVQFSSSFLEGISDYVDPGL--PFISLS 233 (420)
Q Consensus 191 td~~eal-~--~aDiVIlaVp~~~l~~vl~~i~~~l~~~~--iVVs~s 233 (420)
.|+++.. + ++|+||.|++.....+....... .+. +||+..
T Consensus 81 ~dp~~l~~~~~~vDvV~e~tg~~~s~e~a~~~l~---~GakkVVId~~ 125 (339)
T 2x5j_O 81 RSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIA---AGAKKVLFSHP 125 (339)
T ss_dssp SSGGGCCHHHHTCSEEEECSSSCCSHHHHHHHHH---TTCSEEEESSC
T ss_pred CChHHCcccccCCCEEEECCCccccHHHHHHHHH---cCCCEEEEecc
Confidence 3565521 2 79999999997665555544433 233 466543
No 401
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=94.61 E-value=0.03 Score=53.83 Aligned_cols=38 Identities=18% Similarity=0.300 Sum_probs=32.8
Q ss_pred hcCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCHH
Q 014700 124 LERTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPA 163 (420)
Q Consensus 124 ~~~~mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r~~~ 163 (420)
|+..|+|.|.|+ |-+|.+++..|++.| ++|++.+|+.+
T Consensus 2 M~~~~~vlVTGatG~iG~~l~~~L~~~G--~~V~~~~r~~~ 40 (341)
T 3enk_A 2 MSTKGTILVTGGAGYIGSHTAVELLAHG--YDVVIADNLVN 40 (341)
T ss_dssp CCSSCEEEEETTTSHHHHHHHHHHHHTT--CEEEEECCCSS
T ss_pred CCCCcEEEEecCCcHHHHHHHHHHHHCC--CcEEEEecCCc
Confidence 344689999995 999999999999998 99999998653
No 402
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=94.58 E-value=0.18 Score=49.57 Aligned_cols=104 Identities=13% Similarity=0.097 Sum_probs=57.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCC-CCeEEEEe-C-CHHHHHHHHHhc-CCCCCCCCCC--------CC-CceEE--eC
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKS-QLKVYMLM-R-DPAVCQSINEKH-CNCRYFPEQK--------LP-ENVIA--TT 191 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~-~~~V~l~~-r-~~~~~~~i~~~g-~~~~~l~~~~--------l~-~~i~a--~t 191 (420)
++||+|+|+|.+|..+.+.|.+.++ ..+|..+. . +.+....+-+.. ..-++..... +. ..+.+ ..
T Consensus 1 ~ikVgInG~G~IGr~llR~l~~~~~p~~eivaInd~~~~~~~a~ll~sds~~G~~~~~v~~~~~~~l~v~g~~i~v~~~~ 80 (337)
T 1rm4_O 1 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDR 80 (337)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCSSCSEEEEEEECTTCHHHHHHHHHCCTTTCSCSSCEEECTTSEEEETTEEEEEECCS
T ss_pred CeEEEEECCCHHHHHHHHHHHhCCCCCeEEEEEEcCCCHHHHHHHhcccccCCCccceeEEecCCeEEECCeEEEEEecC
Confidence 3699999999999999999987621 24554443 2 444444444321 1111211111 11 11222 23
Q ss_pred CHHHh-cc--CCcEEEEccChhhHHHHHHHhhhcCCCCCeEEEec
Q 014700 192 DAKTA-LL--GADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLS 233 (420)
Q Consensus 192 d~~ea-l~--~aDiVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~s 233 (420)
|+++. .. ++|+||.|++.....+...... +.|..+|.++
T Consensus 81 dp~~i~w~~~gvDiV~eatg~~~s~e~a~~~l---~~Gak~V~iS 122 (337)
T 1rm4_O 81 NPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHL---QAGAKKVLIT 122 (337)
T ss_dssp CGGGSCHHHHTCCEEEECSSSCCBHHHHHHHH---HTTCSEEEES
T ss_pred ChhhCcccccCCCEEEECCCchhhHHHHHHHH---HcCCEEEEEC
Confidence 55442 23 7999999999766555554433 2455555444
No 403
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=94.58 E-value=0.17 Score=50.60 Aligned_cols=92 Identities=13% Similarity=0.144 Sum_probs=52.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcC-CCCeEEEE-eC-CHHHHHHHHHhcC-CCCCCCCC-----CC--C-CceEE--eCC
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKK-SQLKVYML-MR-DPAVCQSINEKHC-NCRYFPEQ-----KL--P-ENVIA--TTD 192 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG-~~~~V~l~-~r-~~~~~~~i~~~g~-~~~~l~~~-----~l--~-~~i~a--~td 192 (420)
++||+|+|+|.+|..+.+.|.+.+ .+.+|..+ ++ +.+....+.+..- ..++.... .+ . ..+.+ ..|
T Consensus 2 ~ikVgInGfGrIGr~vlR~l~~~~~~~veIVaInd~~d~~~~a~ll~yds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~d 81 (380)
T 2d2i_A 2 TIRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLEYDSVLGRFNADISYDENSITVNGKTMKIVCDRN 81 (380)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSCSEEEEEEECSSCHHHHHHHHHCCTTTCCCCSCEEEETTEEEETTEEEEEECCSC
T ss_pred CcEEEEECcCHHHHHHHHHHhcCCCCCEEEEEEecCCCHHHHHHhhcccccCCCCCCcEEEeCCeEEECCeEEEEEecCC
Confidence 369999999999999999998751 13566544 33 5555544443211 11111111 11 1 12233 346
Q ss_pred HHHhc---cCCcEEEEccChhhHHHHHHH
Q 014700 193 AKTAL---LGADYCLHAMPVQFSSSFLEG 218 (420)
Q Consensus 193 ~~eal---~~aDiVIlaVp~~~l~~vl~~ 218 (420)
+++.. .++|+||.|++.....+....
T Consensus 82 p~~l~w~~~gvDvV~e~TG~f~s~e~a~~ 110 (380)
T 2d2i_A 82 PLNLPWKEWDIDLVIESTGVFVTAEGASK 110 (380)
T ss_dssp GGGCCHHHHTCCEEEECSSSCCBHHHHHH
T ss_pred hHHCCcccCCCCEEEECCCccccHHHHHH
Confidence 66532 279999999997655444443
No 404
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=94.56 E-value=0.024 Score=57.76 Aligned_cols=100 Identities=10% Similarity=0.076 Sum_probs=62.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCC---eEEEEe----CC----HH-HHHHHHHhcCCCCCCCCCCCCCceEEeCCHH
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQL---KVYMLM----RD----PA-VCQSINEKHCNCRYFPEQKLPENVIATTDAK 194 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~---~V~l~~----r~----~~-~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~ 194 (420)
..||.|+|+|.+|.+++..|.+.| . +|++++ |+ .. ..+.+... ...+...... . ....++.
T Consensus 186 ~~rvlvlGAGgAg~aia~~L~~~G--~~~~~I~vvd~~~~R~G~~~~a~~~~~L~~~--~~~~a~~~~~--~-~~~~~L~ 258 (439)
T 2dvm_A 186 EITLALFGAGAAGFATLRILTEAG--VKPENVRVVELVNGKPRILTSDLDLEKLFPY--RGWLLKKTNG--E-NIEGGPQ 258 (439)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTT--CCGGGEEEEEEETTEEEECCTTSCHHHHSTT--CHHHHTTSCT--T-CCCSSHH
T ss_pred CCEEEEECccHHHHHHHHHHHHcC--CCcCeEEEEEccCCCcCccccccchhHHHHH--HHHHhhcccc--c-cccccHH
Confidence 468999999999999999999998 5 899999 76 22 11112210 0000000000 0 0123678
Q ss_pred HhccCCcEEEEccCh--hhHHHHHHHhhhcCCCCCeEEEeccCC
Q 014700 195 TALLGADYCLHAMPV--QFSSSFLEGISDYVDPGLPFISLSKGL 236 (420)
Q Consensus 195 eal~~aDiVIlaVp~--~~l~~vl~~i~~~l~~~~iVVs~snGi 236 (420)
++++++|++|-+++. ..+.. +....+.++.+|+.+.|..
T Consensus 259 e~l~~aDVlInaT~~~~G~~~~---e~v~~m~~~~iVfDLynP~ 299 (439)
T 2dvm_A 259 EALKDADVLISFTRPGPGVIKP---QWIEKMNEDAIVFPLANPV 299 (439)
T ss_dssp HHHTTCSEEEECSCCCSSSSCH---HHHTTSCTTCEEEECCSSS
T ss_pred HHhccCCEEEEcCCCccCCCCh---HHHHhcCCCCEEEECCCCC
Confidence 888999999999997 33221 1223455778888887644
No 405
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=94.52 E-value=0.14 Score=50.22 Aligned_cols=102 Identities=14% Similarity=0.167 Sum_probs=58.6
Q ss_pred CeEEEEcccHHHHHHHHHHHhc--CCCCeEEEE-eC-CHHHHHHHHHhc-CCCCCCCCC-----CC--C-CceEEe--CC
Q 014700 128 NKVVVLGGGSFGTAMAAHVANK--KSQLKVYML-MR-DPAVCQSINEKH-CNCRYFPEQ-----KL--P-ENVIAT--TD 192 (420)
Q Consensus 128 mkI~IIGaGamG~alA~~La~a--G~~~~V~l~-~r-~~~~~~~i~~~g-~~~~~l~~~-----~l--~-~~i~a~--td 192 (420)
+||+|+|+|.+|.-+.+.|.+. . +.+|..+ ++ +.+....+.+.. ...++.... .+ . ..+.+. .|
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~p-~~eivain~~~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~d 79 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKNP-DIEVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPD 79 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCT-TCEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCC-CeEEEEEEcCCChHHhhhhccCcCcCCCcCCcEEEcCCEEEECCeEEEEEecCC
Confidence 4899999999999999999876 3 3677655 43 444444443211 111111110 11 1 133443 25
Q ss_pred HHHh-cc--CCcEEEEccChhhHHHHHHHhhhcCCCCC--eEEEec
Q 014700 193 AKTA-LL--GADYCLHAMPVQFSSSFLEGISDYVDPGL--PFISLS 233 (420)
Q Consensus 193 ~~ea-l~--~aDiVIlaVp~~~l~~vl~~i~~~l~~~~--iVVs~s 233 (420)
+++. .. ++|+||.|+|.....+...... +.+. +||+..
T Consensus 80 p~~l~w~~~~vDvV~~atg~~~s~e~a~~~l---~aGakkvVId~~ 122 (332)
T 1hdg_O 80 PSKLPWKDLGVDFVIESTGVFRNREKAELHL---QAGAKKVIITAP 122 (332)
T ss_dssp GGGSCHHHHTCCEEEECSSSCCBHHHHTHHH---HTTCSEEEESSC
T ss_pred hHHCcccccCCCEEEECCccchhHHHHHHHH---HcCCcEEEEeCC
Confidence 6553 12 7999999999766555554433 2344 677654
No 406
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=94.50 E-value=0.31 Score=47.91 Aligned_cols=85 Identities=14% Similarity=0.138 Sum_probs=54.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCH-------------------HHHHHHHHh--cCCCCCCCCCCCCC
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP-------------------AVCQSINEK--HCNCRYFPEQKLPE 185 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~-------------------~~~~~i~~~--g~~~~~l~~~~l~~ 185 (420)
..+|.|||+|..|+.+|..|+.+|. ..++++|.+. .+++.+.+. .++ |..
T Consensus 36 ~~~VlivG~GGlG~~ia~~La~~Gv-g~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~ln----p~v---- 106 (346)
T 1y8q_A 36 ASRVLLVGLKGLGAEIAKNLILAGV-KGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLN----PMV---- 106 (346)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTC-SEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTC----TTS----
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCC-CEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHC----CCe----
Confidence 5699999999999999999999995 4899997542 122222111 011 111
Q ss_pred ceEEe-----CCHHHhccCCcEEEEccChhhHHHHHHHhh
Q 014700 186 NVIAT-----TDAKTALLGADYCLHAMPVQFSSSFLEGIS 220 (420)
Q Consensus 186 ~i~a~-----td~~eal~~aDiVIlaVp~~~l~~vl~~i~ 220 (420)
.+.+. ...++.+.++|+||.|+-+...+..+.+..
T Consensus 107 ~v~~~~~~~~~~~~~~~~~~dvVv~~~d~~~~r~~ln~~~ 146 (346)
T 1y8q_A 107 DVKVDTEDIEKKPESFFTQFDAVCLTCCSRDVIVKVDQIC 146 (346)
T ss_dssp EEEEECSCGGGCCHHHHTTCSEEEEESCCHHHHHHHHHHH
T ss_pred EEEEEecccCcchHHHhcCCCEEEEcCCCHHHHHHHHHHH
Confidence 11111 123456789999999988766665565543
No 407
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=94.49 E-value=0.054 Score=55.91 Aligned_cols=71 Identities=17% Similarity=0.239 Sum_probs=48.7
Q ss_pred hcCCCeEEEEcccHHHHH-HHHHHHhcCCCCeEEEEeCCH-HHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCc
Q 014700 124 LERTNKVVVLGGGSFGTA-MAAHVANKKSQLKVYMLMRDP-AVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGAD 201 (420)
Q Consensus 124 ~~~~mkI~IIGaGamG~a-lA~~La~aG~~~~V~l~~r~~-~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aD 201 (420)
+..++||.|||.|..|.+ +|..|.+.| ++|+++|..+ ...+.+.+.|+.. ..-.+++ .+.++|
T Consensus 19 ~~~~~~v~viGiG~sG~s~~A~~l~~~G--~~V~~~D~~~~~~~~~l~~~gi~~------------~~g~~~~-~~~~~d 83 (494)
T 4hv4_A 19 MRRVRHIHFVGIGGAGMGGIAEVLANEG--YQISGSDLAPNSVTQHLTALGAQI------------YFHHRPE-NVLDAS 83 (494)
T ss_dssp ---CCEEEEETTTSTTHHHHHHHHHHTT--CEEEEECSSCCHHHHHHHHTTCEE------------ESSCCGG-GGTTCS
T ss_pred hccCCEEEEEEEcHhhHHHHHHHHHhCC--CeEEEEECCCCHHHHHHHHCCCEE------------ECCCCHH-HcCCCC
Confidence 445689999999999995 899999998 9999999654 3445666655321 1112333 367899
Q ss_pred EEEEc--cCh
Q 014700 202 YCLHA--MPV 209 (420)
Q Consensus 202 iVIla--Vp~ 209 (420)
+||+. +|.
T Consensus 84 ~vV~Spgi~~ 93 (494)
T 4hv4_A 84 VVVVSTAISA 93 (494)
T ss_dssp EEEECTTSCT
T ss_pred EEEECCCCCC
Confidence 99985 553
No 408
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=94.48 E-value=0.13 Score=50.33 Aligned_cols=104 Identities=14% Similarity=0.156 Sum_probs=58.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEe-C-CHHHHHHHHHhcCCCCCCCCC------CCC---CceEEe--CCH
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLM-R-DPAVCQSINEKHCNCRYFPEQ------KLP---ENVIAT--TDA 193 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~-r-~~~~~~~i~~~g~~~~~l~~~------~l~---~~i~a~--td~ 193 (420)
++||+|+|.|.+|.-+.+.|.+.. +.+|.... + +.+....+.+..-....+++. .+. ..+.+. .|+
T Consensus 1 ~ikVgI~G~G~iG~~l~R~l~~~~-~veiv~i~~~~~~~~~a~l~~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~dp 79 (330)
T 1gad_O 1 TIKVGINGFGRIGRIVFRAAQKRS-DIEIVAINDLLDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDP 79 (330)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCS-SEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSG
T ss_pred CeEEEEECcCHHHHHHHHHHHcCC-CeEEEEEcCCCChhHHhHhhcccccCCCCCCeEEEcCCEEEECCEEEEEEEcCCh
Confidence 369999999999999999998764 35665443 3 344444443321111111111 010 112222 245
Q ss_pred HHhc---cCCcEEEEccChhhHHHHHHHhhhcCCCCCeEEEecc
Q 014700 194 KTAL---LGADYCLHAMPVQFSSSFLEGISDYVDPGLPFISLSK 234 (420)
Q Consensus 194 ~eal---~~aDiVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~sn 234 (420)
++.- .++|+||.|+|.....+...... +.+..+|.++.
T Consensus 80 ~~i~w~~~~vDvVf~atg~~~s~e~a~~~l---~~GakvVdlSa 120 (330)
T 1gad_O 80 ANLKWDEVGVDVVAEATGLFLTDETARKHI---TAGAKKVVMTG 120 (330)
T ss_dssp GGGCHHHHTCSEEEECSSSCCSHHHHTHHH---HTTCSEEEESS
T ss_pred hhCccccccCCEEEECCCccccHHHHHHHH---HCCCEEEEECC
Confidence 5421 47999999999766555444332 34555555554
No 409
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=94.48 E-value=0.01 Score=58.64 Aligned_cols=36 Identities=14% Similarity=0.156 Sum_probs=32.6
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCHH
Q 014700 126 RTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPA 163 (420)
Q Consensus 126 ~~mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r~~~ 163 (420)
.+|+|.|.|+ |.+|..++..|++.| ++|++++|++.
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~ 64 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEG--HYVIASDWKKN 64 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESSCC
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCC--CeEEEEECCCc
Confidence 3689999997 999999999999998 99999999764
No 410
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=94.47 E-value=0.058 Score=52.21 Aligned_cols=35 Identities=17% Similarity=0.156 Sum_probs=32.0
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCH
Q 014700 126 RTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDP 162 (420)
Q Consensus 126 ~~mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r~~ 162 (420)
.+|+|.|.|+ |.+|..++..|++.| ++|++++|++
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~ 61 (352)
T 1sb8_A 26 QPKVWLITGVAGFIGSNLLETLLKLD--QKVVGLDNFA 61 (352)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEECCS
T ss_pred cCCeEEEECCCcHHHHHHHHHHHHCC--CEEEEEeCCC
Confidence 4689999997 999999999999998 9999999864
No 411
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=94.45 E-value=0.091 Score=54.66 Aligned_cols=74 Identities=8% Similarity=-0.043 Sum_probs=48.6
Q ss_pred hhhcCCCeEEEEcccHHHHH-HHHHHHhcCCCCeEEEEeCCH--HHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhcc
Q 014700 122 DILERTNKVVVLGGGSFGTA-MAAHVANKKSQLKVYMLMRDP--AVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL 198 (420)
Q Consensus 122 ~~~~~~mkI~IIGaGamG~a-lA~~La~aG~~~~V~l~~r~~--~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~ 198 (420)
+++-..++|.|||.|..|.+ +|..|.+.| ++|+++|... ...+.+.+.|+. +..-.+++....
T Consensus 14 ~~~~~~~~i~~iGiGg~Gms~lA~~l~~~G--~~V~~sD~~~~~~~~~~L~~~gi~------------~~~G~~~~~~~~ 79 (524)
T 3hn7_A 14 NLYFQGMHIHILGICGTFMGSLALLARALG--HTVTGSDANIYPPMSTQLEQAGVT------------IEEGYLIAHLQP 79 (524)
T ss_dssp -----CCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCCCTTHHHHHHHTTCE------------EEESCCGGGGCS
T ss_pred ceeecCCEEEEEEecHhhHHHHHHHHHhCC--CEEEEECCCCCcHHHHHHHHCCCE------------EECCCCHHHcCC
Confidence 34555689999999999986 788888888 9999999753 345567665532 111124444345
Q ss_pred CCcEEEEc--cCh
Q 014700 199 GADYCLHA--MPV 209 (420)
Q Consensus 199 ~aDiVIla--Vp~ 209 (420)
++|+||.. +|.
T Consensus 80 ~~d~vV~Spgi~~ 92 (524)
T 3hn7_A 80 APDLVVVGNAMKR 92 (524)
T ss_dssp CCSEEEECTTCCT
T ss_pred CCCEEEECCCcCC
Confidence 78999985 553
No 412
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=94.43 E-value=0.025 Score=54.73 Aligned_cols=34 Identities=21% Similarity=0.301 Sum_probs=30.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHh---cCCCCeEEEEeCCH
Q 014700 127 TNKVVVLGGGSFGTAMAAHVAN---KKSQLKVYMLMRDP 162 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~---aG~~~~V~l~~r~~ 162 (420)
|++|.|||+|..|.+.|..|++ .| ++|+++++.+
T Consensus 1 m~dV~IIGaG~aGl~~A~~L~~~~~~G--~~V~v~Ek~~ 37 (342)
T 3qj4_A 1 MAQVLIVGAGMTGSLCAALLRRQTSGP--LYLAVWDKAD 37 (342)
T ss_dssp CEEEEEECCSHHHHHHHHHHHSCC-CC--EEEEEECSSS
T ss_pred CCcEEEECCcHHHHHHHHHHHhhccCC--ceEEEEECCC
Confidence 4689999999999999999999 88 8999998763
No 413
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=94.40 E-value=0.37 Score=49.18 Aligned_cols=72 Identities=10% Similarity=0.029 Sum_probs=48.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCH-HHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEE
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP-AVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~-~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIl 205 (420)
.++|.|||+|.+|..-+..|.+.| .+|++++.+. +.++.+.+.+ ...+. .-.-+.+ .+.++|+||.
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~g--a~V~vi~~~~~~~~~~l~~~~-~i~~~---------~~~~~~~-~l~~~~lVi~ 78 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAG--ARLTVNALTFIPQFTVWANEG-MLTLV---------EGPFDET-LLDSCWLAIA 78 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT--BEEEEEESSCCHHHHHHHTTT-SCEEE---------ESSCCGG-GGTTCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCc--CEEEEEcCCCCHHHHHHHhcC-CEEEE---------ECCCCcc-ccCCccEEEE
Confidence 579999999999999999999998 8999999753 2334443322 11100 0001222 3678999999
Q ss_pred ccChhh
Q 014700 206 AMPVQF 211 (420)
Q Consensus 206 aVp~~~ 211 (420)
++....
T Consensus 79 at~~~~ 84 (457)
T 1pjq_A 79 ATDDDT 84 (457)
T ss_dssp CCSCHH
T ss_pred cCCCHH
Confidence 887653
No 414
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=94.39 E-value=0.035 Score=52.50 Aligned_cols=34 Identities=32% Similarity=0.546 Sum_probs=31.5
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCHH
Q 014700 128 NKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPA 163 (420)
Q Consensus 128 mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r~~~ 163 (420)
|||.|.|+ |-+|+.++..|.+.| |+|+++.|+++
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G--~~V~~l~R~~~ 35 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARG--HEVTLVSRKPG 35 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESSCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC--CEEEEEECCCC
Confidence 89999997 999999999999999 99999999753
No 415
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=94.37 E-value=0.036 Score=54.95 Aligned_cols=34 Identities=18% Similarity=0.211 Sum_probs=31.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCH
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~ 162 (420)
.++|.|||+|..|.++|..|++.| ++|+++++.+
T Consensus 23 ~~dV~IVGaG~aGl~~A~~La~~G--~~V~v~E~~~ 56 (407)
T 3rp8_A 23 HMKAIVIGAGIGGLSAAVALKQSG--IDCDVYEAVK 56 (407)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CCEEEEeCCC
Confidence 479999999999999999999998 8999999875
No 416
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=94.34 E-value=0.032 Score=56.18 Aligned_cols=34 Identities=12% Similarity=0.338 Sum_probs=30.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCH
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~ 162 (420)
+++|.|||+|..|.++|..|+++| ++|+++++.+
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G--~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHD--VDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTT--CEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCC--CeEEEEcCCC
Confidence 358999999999999999999999 9999999764
No 417
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=94.31 E-value=0.021 Score=55.08 Aligned_cols=69 Identities=17% Similarity=0.200 Sum_probs=44.9
Q ss_pred cCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEE
Q 014700 125 ERTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (420)
Q Consensus 125 ~~~mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiV 203 (420)
...|+|.|.|+ |.+|.+++..|++.| ++|++++|+++. .+ ..++.. .+.-..+.++++.++|+|
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~~G--~~V~~~~r~~~~------~~--~~~~~~-----Dl~d~~~~~~~~~~~d~v 81 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRTQG--RTVRGFDLRPSG------TG--GEEVVG-----SLEDGQALSDAIMGVSAV 81 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTT--CCEEEEESSCCS------SC--CSEEES-----CTTCHHHHHHHHTTCSEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCC--CEEEEEeCCCCC------CC--ccEEec-----CcCCHHHHHHHHhCCCEE
Confidence 34689999997 999999999999998 999999998642 11 111000 000011345667899999
Q ss_pred EEccC
Q 014700 204 LHAMP 208 (420)
Q Consensus 204 IlaVp 208 (420)
|.+..
T Consensus 82 ih~A~ 86 (347)
T 4id9_A 82 LHLGA 86 (347)
T ss_dssp EECCC
T ss_pred EECCc
Confidence 98653
No 418
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=94.26 E-value=0.037 Score=54.28 Aligned_cols=75 Identities=15% Similarity=0.148 Sum_probs=48.1
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCHHHH--HHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEE
Q 014700 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVC--QSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYC 203 (420)
Q Consensus 127 ~mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r~~~~~--~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiV 203 (420)
.|+|.|.|+ |.+|.+++..|++.| ++|++.+|+++.. +.+.... ....+.+ . .+.-..+++++++++|+|
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~l~~~~-~v~~v~~-D---~l~d~~~l~~~~~~~d~V 77 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVG--HHVRAQVHSLKGLIAEELQAIP-NVTLFQG-P---LLNNVPLMDTLFEGAHLA 77 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTT--CCEEEEESCSCSHHHHHHHTST-TEEEEES-C---CTTCHHHHHHHHTTCSEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC--CEEEEEECCCChhhHHHHhhcC-CcEEEEC-C---ccCCHHHHHHHHhcCCEE
Confidence 578999996 999999999999988 8999999986543 3333210 1000000 0 000001245567899999
Q ss_pred EEccC
Q 014700 204 LHAMP 208 (420)
Q Consensus 204 IlaVp 208 (420)
|.+..
T Consensus 78 i~~a~ 82 (352)
T 1xgk_A 78 FINTT 82 (352)
T ss_dssp EECCC
T ss_pred EEcCC
Confidence 97764
No 419
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=94.26 E-value=0.056 Score=51.67 Aligned_cols=34 Identities=18% Similarity=0.393 Sum_probs=31.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCH
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~ 162 (420)
.++|.|||+|.+|..-+..|.+.| ++|++++.+.
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~G--a~VtViap~~ 46 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTG--CKLTLVSPDL 46 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGT--CEEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhCC--CEEEEEcCCC
Confidence 589999999999999999999999 8999998653
No 420
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=94.23 E-value=0.031 Score=55.27 Aligned_cols=92 Identities=14% Similarity=0.206 Sum_probs=57.4
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhcCCC-CeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEe-CCHHHhccCCcEEE
Q 014700 128 NKVVVLG-GGSFGTAMAAHVANKKSQ-LKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIAT-TDAKTALLGADYCL 204 (420)
Q Consensus 128 mkI~IIG-aGamG~alA~~La~aG~~-~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~-td~~eal~~aDiVI 204 (420)
+||+||| .|..|.-|.+.|.+..+. .++.++..... .|.... +.+ ..+.+. .+. +.+.++|+||
T Consensus 2 ~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~-------aG~~~~-~~~----~~~~~~~~~~-~~~~~~Dvvf 68 (344)
T 3tz6_A 2 LSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARS-------QGRKLA-FRG----QEIEVEDAET-ADPSGLDIAL 68 (344)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTT-------SSCEEE-ETT----EEEEEEETTT-SCCTTCSEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECccc-------CCCcee-ecC----CceEEEeCCH-HHhccCCEEE
Confidence 6999999 599999999999886311 24555543221 121111 111 112221 122 3367899999
Q ss_pred EccChhhHHHHHHHhhhcCCCCCeEEEeccC
Q 014700 205 HAMPVQFSSSFLEGISDYVDPGLPFISLSKG 235 (420)
Q Consensus 205 laVp~~~l~~vl~~i~~~l~~~~iVVs~snG 235 (420)
+|+|.....+....+.. .+..||+++.-
T Consensus 69 ~a~~~~~s~~~a~~~~~---~G~~vID~Sa~ 96 (344)
T 3tz6_A 69 FSAGSAMSKVQAPRFAA---AGVTVIDNSSA 96 (344)
T ss_dssp ECSCHHHHHHHHHHHHH---TTCEEEECSST
T ss_pred ECCChHHHHHHHHHHHh---CCCEEEECCCc
Confidence 99998887777766543 57788888753
No 421
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=94.19 E-value=0.13 Score=49.98 Aligned_cols=83 Identities=13% Similarity=0.051 Sum_probs=55.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhc------c
Q 014700 126 RTNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL------L 198 (420)
Q Consensus 126 ~~mkI~IIGaGamG~alA~~La~aG~~~-~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal------~ 198 (420)
...+|.|+|+|.+|.+.+..+...| . +|+..++++++.+.+++.|...... .. ..+..+.+ .
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~G--a~~Vi~~~~~~~~~~~~~~~Ga~~~~~----~~-----~~~~~~~v~~~~~g~ 235 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASG--AYPVIVSEPSDFRRELAKKVGADYVIN----PF-----EEDVVKEVMDITDGN 235 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTT--CCSEEEECSCHHHHHHHHHHTCSEEEC----TT-----TSCHHHHHHHHTTTS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcC--CCEEEEECCCHHHHHHHHHhCCCEEEC----CC-----CcCHHHHHHHHcCCC
Confidence 3468999999999999999888887 7 8999999998888777655321100 00 01222222 2
Q ss_pred CCcEEEEccCh-hhHHHHHHHh
Q 014700 199 GADYCLHAMPV-QFSSSFLEGI 219 (420)
Q Consensus 199 ~aDiVIlaVp~-~~l~~vl~~i 219 (420)
.+|+||-++.. ..+...++.+
T Consensus 236 g~D~vid~~g~~~~~~~~~~~l 257 (348)
T 2d8a_A 236 GVDVFLEFSGAPKALEQGLQAV 257 (348)
T ss_dssp CEEEEEECSCCHHHHHHHHHHE
T ss_pred CCCEEEECCCCHHHHHHHHHHH
Confidence 58999999985 4455554444
No 422
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=94.18 E-value=0.34 Score=45.52 Aligned_cols=43 Identities=28% Similarity=0.374 Sum_probs=36.7
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHH
Q 014700 126 RTNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (420)
Q Consensus 126 ~~mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~ 170 (420)
..++|.|.|+ |.+|.+++..|++.| ++|++.+|+++..+.+.+
T Consensus 27 ~~k~vlITGasggIG~~la~~l~~~G--~~V~~~~r~~~~~~~~~~ 70 (286)
T 1xu9_A 27 QGKKVIVTGASKGIGREMAYHLAKMG--AHVVVTARSKETLQKVVS 70 (286)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHH
Confidence 3578999997 899999999999998 899999999877665543
No 423
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=94.17 E-value=0.34 Score=47.17 Aligned_cols=96 Identities=9% Similarity=0.097 Sum_probs=59.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhc-----cCCc
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL-----LGAD 201 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal-----~~aD 201 (420)
..+|.|+|+|.+|...+..+...| .+|++.++++++.+.+++.|....+.... ... ......+.. ...|
T Consensus 169 g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~~lGa~~~~~~~~--~~~--~~~~i~~~~~~~~g~g~D 242 (352)
T 1e3j_A 169 GTTVLVIGAGPIGLVSVLAAKAYG--AFVVCTARSPRRLEVAKNCGADVTLVVDP--AKE--EESSIIERIRSAIGDLPN 242 (352)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHTTCSEEEECCT--TTS--CHHHHHHHHHHHSSSCCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHcC--CEEEEEcCCHHHHHHHHHhCCCEEEcCcc--ccc--HHHHHHHHhccccCCCCC
Confidence 468999999999999888887777 78999999998888777655321100000 000 000111212 3689
Q ss_pred EEEEccChh-hHHHHHHHhhhcCCCCCeEEEe
Q 014700 202 YCLHAMPVQ-FSSSFLEGISDYVDPGLPFISL 232 (420)
Q Consensus 202 iVIlaVp~~-~l~~vl~~i~~~l~~~~iVVs~ 232 (420)
+||-++... .+...+ ..++++..++.+
T Consensus 243 ~vid~~g~~~~~~~~~----~~l~~~G~iv~~ 270 (352)
T 1e3j_A 243 VTIDCSGNEKCITIGI----NITRTGGTLMLV 270 (352)
T ss_dssp EEEECSCCHHHHHHHH----HHSCTTCEEEEC
T ss_pred EEEECCCCHHHHHHHH----HHHhcCCEEEEE
Confidence 999999864 344444 344455555544
No 424
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=94.17 E-value=0.3 Score=45.22 Aligned_cols=101 Identities=12% Similarity=0.149 Sum_probs=62.2
Q ss_pred cCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEE-EEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcE
Q 014700 125 ERTNKVVVLGG-GSFGTAMAAHVANKKSQLKVY-MLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADY 202 (420)
Q Consensus 125 ~~~mkI~IIGa-GamG~alA~~La~aG~~~~V~-l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDi 202 (420)
...||..|+|+ |.||..++......+ +++. .+++... ++ +.++|+
T Consensus 10 ~~~~~~~v~Ga~GrMG~~i~~~~~~~~--~elv~~id~~~~---------------------------~~----l~~~DV 56 (228)
T 1vm6_A 10 HHHMKYGIVGYSGRMGQEIQKVFSEKG--HELVLKVDVNGV---------------------------EE----LDSPDV 56 (228)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEEETTEE---------------------------EE----CSCCSE
T ss_pred hccceeEEEEecCHHHHHHHHHHhCCC--CEEEEEEcCCCc---------------------------cc----ccCCCE
Confidence 34689999998 999999988665555 6765 3454321 01 236899
Q ss_pred EE-EccChhhHHHHHHHhhhcCCCCCeEEEeccCCCcchhhhHHHHHHHHhCCCCCCeEEEECcccHHH
Q 014700 203 CL-HAMPVQFSSSFLEGISDYVDPGLPFISLSKGLELNTLRMMSQIIPQALRNPRQPFIALSGPSFALE 270 (420)
Q Consensus 203 VI-laVp~~~l~~vl~~i~~~l~~~~iVVs~snGi~~~t~~~~se~l~~~lg~~~~~~~vl~GP~~a~e 270 (420)
+| +..|. .+.+.++.... .+..+|..+.|+..+.. +.+.+. .. ...++..|++...
T Consensus 57 vIDFT~P~-a~~~~~~~~~~---~g~~~ViGTTG~~~~~~----~~l~~~-a~---~~~vv~apNfSlG 113 (228)
T 1vm6_A 57 VIDFSSPE-ALPKTVDLCKK---YRAGLVLGTTALKEEHL----QMLREL-SK---EVPVVQAYNFSIG 113 (228)
T ss_dssp EEECSCGG-GHHHHHHHHHH---HTCEEEECCCSCCHHHH----HHHHHH-TT---TSEEEECSCCCHH
T ss_pred EEECCCHH-HHHHHHHHHHH---cCCCEEEeCCCCCHHHH----HHHHHH-Hh---hCCEEEeccccHH
Confidence 99 56565 44444444333 35667777889886532 233333 22 2568888998764
No 425
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=94.16 E-value=0.34 Score=45.05 Aligned_cols=41 Identities=20% Similarity=0.297 Sum_probs=34.9
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH
Q 014700 127 TNKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSIN 169 (420)
Q Consensus 127 ~mkI~IIG-aGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~ 169 (420)
.++|.|.| .|.+|.++|..|++.| ++|.+.+|+++..+.+.
T Consensus 13 ~k~vlVTGas~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~ 54 (267)
T 1iy8_A 13 DRVVLITGGGSGLGRATAVRLAAEG--AKLSLVDVSSEGLEASK 54 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHH
Confidence 46788888 5899999999999998 89999999987665544
No 426
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=94.15 E-value=0.039 Score=53.87 Aligned_cols=33 Identities=27% Similarity=0.566 Sum_probs=30.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCC
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRD 161 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~ 161 (420)
..+|.|||+|..|.+.|..|++.| ++|+++++.
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~~G--~~V~lle~~ 37 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAKRG--EEVTVIEKR 37 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTT--CCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHCC--CeEEEEeCC
Confidence 458999999999999999999998 899999986
No 427
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=94.14 E-value=0.038 Score=55.04 Aligned_cols=33 Identities=24% Similarity=0.353 Sum_probs=30.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCH
Q 014700 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (420)
Q Consensus 128 mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~ 162 (420)
|+|.|||+|..|.+.|..|+++| ++|+++++++
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G--~~V~vlE~~~ 33 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNG--HEIIVLEKSA 33 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTT--CEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHCC--CeEEEEeCCC
Confidence 68999999999999999999998 8999998864
No 428
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=94.14 E-value=0.037 Score=52.90 Aligned_cols=34 Identities=18% Similarity=0.290 Sum_probs=31.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCH
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~ 162 (420)
+++|.|||+|..|.++|..|+++| .+|+++++.+
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G--~~V~vlE~~~ 35 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAG--HQVHLFDKSR 35 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTT--CCEEEECSSS
T ss_pred CceEEEECCcHHHHHHHHHHHHCC--CcEEEEECCC
Confidence 358999999999999999999998 8999999764
No 429
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=94.11 E-value=0.36 Score=45.57 Aligned_cols=42 Identities=19% Similarity=0.258 Sum_probs=35.7
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHH
Q 014700 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (420)
Q Consensus 127 ~mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~ 170 (420)
.++|.|.|+ |.+|.+++..|++.| ++|++.+|+.+..+.+.+
T Consensus 18 ~k~vlVTGasggIG~~la~~l~~~G--~~V~~~~r~~~~~~~~~~ 60 (303)
T 1yxm_A 18 GQVAIVTGGATGIGKAIVKELLELG--SNVVIASRKLERLKSAAD 60 (303)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH
Confidence 478999985 899999999999998 899999999876655443
No 430
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=94.07 E-value=0.085 Score=54.85 Aligned_cols=43 Identities=30% Similarity=0.376 Sum_probs=36.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHh
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEK 171 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~ 171 (420)
.+++.|+|+|.+|.+++..|++.| .+|++++|+.++++.+.+.
T Consensus 364 ~k~vlV~GaGGig~aia~~L~~~G--~~V~i~~R~~~~a~~la~~ 406 (523)
T 2o7s_A 364 SKTVVVIGAGGAGKALAYGAKEKG--AKVVIANRTYERALELAEA 406 (523)
T ss_dssp --CEEEECCSHHHHHHHHHHHHHC--C-CEEEESSHHHHHHHHHH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHHH
Confidence 458999999999999999999999 7999999999888777653
No 431
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=94.03 E-value=0.043 Score=54.55 Aligned_cols=34 Identities=18% Similarity=0.258 Sum_probs=31.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCe-EEEEeCCH
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLK-VYMLMRDP 162 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~-V~l~~r~~ 162 (420)
.++|.|||+|..|.++|..|++.| ++ |+++++.+
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G--~~~v~v~E~~~ 38 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAG--IGKVTLLESSS 38 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CSEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCC--CCeEEEEECCC
Confidence 468999999999999999999998 88 99999864
No 432
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=94.03 E-value=0.027 Score=54.10 Aligned_cols=36 Identities=22% Similarity=0.377 Sum_probs=32.0
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhc-CCCCeEEEEeCCHHHH
Q 014700 128 NKVVVLGG-GSFGTAMAAHVANK-KSQLKVYMLMRDPAVC 165 (420)
Q Consensus 128 mkI~IIGa-GamG~alA~~La~a-G~~~~V~l~~r~~~~~ 165 (420)
|||.|.|+ |.+|..++..|.+. | ++|++++|+++..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g--~~V~~~~r~~~~~ 38 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDH--YEVYGLDIGSDAI 38 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTT--CEEEEEESCCGGG
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCC--CEEEEEeCCcchH
Confidence 68999997 99999999999997 7 8999999987543
No 433
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=94.01 E-value=0.051 Score=51.62 Aligned_cols=35 Identities=20% Similarity=0.236 Sum_probs=29.1
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCHH
Q 014700 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPA 163 (420)
Q Consensus 127 ~mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r~~~ 163 (420)
.|+|.|.|+ |.+|.+++..|++.| ++|++.+|+++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~ 37 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNN--WHAVGCGFRRA 37 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTT--CEEEEEC----
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCC--CeEEEEccCCC
Confidence 479999997 999999999999998 99999998754
No 434
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=94.00 E-value=0.24 Score=46.07 Aligned_cols=41 Identities=20% Similarity=0.171 Sum_probs=35.0
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH
Q 014700 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSIN 169 (420)
Q Consensus 127 ~mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~ 169 (420)
.++|.|.|+ |.+|.+++..|++.| ++|++.+|+++..+.+.
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~ 48 (267)
T 2gdz_A 7 GKVALVTGAAQGIGRAFAEALLLKG--AKVALVDWNLEAGVQCK 48 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHH
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCC--CEEEEEECCHHHHHHHH
Confidence 467999995 899999999999998 99999999987665543
No 435
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=93.98 E-value=0.049 Score=53.93 Aligned_cols=34 Identities=29% Similarity=0.555 Sum_probs=31.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCH
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~ 162 (420)
.++|.|||+|..|.++|..|++.| ++|+++++.+
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G--~~v~v~E~~~ 59 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNG--IDVSVYERDN 59 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTT--CEEEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCC--CCEEEEeCCC
Confidence 358999999999999999999998 8999999865
No 436
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=93.98 E-value=0.14 Score=50.19 Aligned_cols=103 Identities=17% Similarity=0.138 Sum_probs=57.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEE-eC-CHHHHHHHHHhcC-CCCCCCCC-----CC--C-CceEEe--CCH
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYML-MR-DPAVCQSINEKHC-NCRYFPEQ-----KL--P-ENVIAT--TDA 193 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~-~r-~~~~~~~i~~~g~-~~~~l~~~-----~l--~-~~i~a~--td~ 193 (420)
|+||+|+|+|.+|.-+.+.|.+.. +.+|... ++ +.+....+.+..- ..++.... .+ . ..+.+. .|+
T Consensus 1 mikVgI~G~G~iGr~l~R~l~~~~-~veivain~~~~~~~~~~ll~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~dp 79 (334)
T 3cmc_O 1 AVKVGINGFGRIGRNVFRAALKNP-DIEVVAVNDLTDANTLAHLLKYDSVHGRLDAEVSVNGNNLVVNGKEIIVKAERDP 79 (334)
T ss_dssp CEEEEEESCSHHHHHHHHHHTTCT-TEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSSG
T ss_pred CeEEEEECCCHHHHHHHHHHhCCC-CeEEEEEeCCCCHHHHHHHhccCCcCCCcCceEEEccCcEEECCEEEEEEecCCh
Confidence 469999999999999999998763 2566544 33 4444444442210 11110000 01 1 133443 256
Q ss_pred HHh-cc--CCcEEEEccChhhHHHHHHHhhhcCCCCC--eEEEec
Q 014700 194 KTA-LL--GADYCLHAMPVQFSSSFLEGISDYVDPGL--PFISLS 233 (420)
Q Consensus 194 ~ea-l~--~aDiVIlaVp~~~l~~vl~~i~~~l~~~~--iVVs~s 233 (420)
++. .. ++|+||.|+|.....+...... +.+. +||+..
T Consensus 80 ~~i~w~~~~vDvV~~atg~~~s~e~a~~~l---~~Gak~vVId~p 121 (334)
T 3cmc_O 80 ENLAWGEIGVDIVVESTGRFTKREDAAKHL---EAGAKKVIISAP 121 (334)
T ss_dssp GGCCTGGGTCCEEEECSSSCCBHHHHTHHH---HTTCSEEEESSC
T ss_pred hhcCcccCccCEEEECCCchhhHHHHHHHH---HCCCCEEEEeCC
Confidence 553 12 7999999999766555444433 2344 676654
No 437
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=93.98 E-value=0.038 Score=54.42 Aligned_cols=34 Identities=41% Similarity=0.602 Sum_probs=31.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCH
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~ 162 (420)
...|.|||+|..|.+.|..|+++| ++|+++++.+
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~~G--~~V~vlE~~~ 37 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAERG--HRVLVLERHT 37 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT--CCEEEEESSC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCC--CeEEEEeCCC
Confidence 358999999999999999999998 8999999864
No 438
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=93.97 E-value=0.16 Score=47.65 Aligned_cols=42 Identities=19% Similarity=0.350 Sum_probs=35.9
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHH
Q 014700 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (420)
Q Consensus 127 ~mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~ 170 (420)
.+++.|.|+ |.+|.++|..|++.| ++|.+.+|+++..+.+.+
T Consensus 4 ~k~~lVTGas~GIG~aia~~la~~G--~~V~~~~r~~~~~~~~~~ 46 (264)
T 3tfo_A 4 DKVILITGASGGIGEGIARELGVAG--AKILLGARRQARIEAIAT 46 (264)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHH
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHH
Confidence 467888886 889999999999999 899999999887666554
No 439
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=93.92 E-value=0.058 Score=54.94 Aligned_cols=84 Identities=15% Similarity=0.267 Sum_probs=54.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCH-------------------HHHH----HHHHhcCCCCCCCCCCC
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP-------------------AVCQ----SINEKHCNCRYFPEQKL 183 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~-------------------~~~~----~i~~~g~~~~~l~~~~l 183 (420)
..||.|||+|..|+.++..|+.+|. -+++++|.+. .+++ .+++. + |+..+
T Consensus 40 ~~~VlvvG~GGlGs~va~~La~aGv-g~i~ivD~D~Ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~l--n----p~v~v 112 (434)
T 1tt5_B 40 TCKVLVIGAGGLGCELLKNLALSGF-RQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDR--V----PNCNV 112 (434)
T ss_dssp TCCEEEECSSTHHHHHHHHHHHTTC-CCEEEEECCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHH--S----TTCCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCC-CEEEEEcCCEechhccCCCcCCChhHcCcHHHHHHHHHHHhh--C----CCCEE
Confidence 5699999999999999999999995 4899997552 1222 22221 1 11111
Q ss_pred ---CCceEEeCCHHHhccCCcEEEEccChhhHHHHHHHh
Q 014700 184 ---PENVIATTDAKTALLGADYCLHAMPVQFSSSFLEGI 219 (420)
Q Consensus 184 ---~~~i~a~td~~eal~~aDiVIlaVp~~~l~~vl~~i 219 (420)
+..+ .....+.++++|+||.|+-....+..+.+.
T Consensus 113 ~~~~~~i--~~~~~~~~~~~DlVi~~~Dn~~~R~~in~~ 149 (434)
T 1tt5_B 113 VPHFNKI--QDFNDTFYRQFHIIVCGLDSIIARRWINGM 149 (434)
T ss_dssp EEEESCG--GGBCHHHHTTCSEEEECCSCHHHHHHHHHH
T ss_pred EEEeccc--chhhHHHhcCCCEEEECCCCHHHHHHHHHH
Confidence 1111 111135678999999999877666555554
No 440
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=93.87 E-value=0.047 Score=54.16 Aligned_cols=33 Identities=33% Similarity=0.377 Sum_probs=30.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCH
Q 014700 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (420)
Q Consensus 128 mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~ 162 (420)
|+|.|||+|..|.+.|..|+++| ++|+++++++
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G--~~V~vlE~~~ 33 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAG--HEVEVFERLP 33 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTT--CEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCC--CceEEEeCCC
Confidence 68999999999999999999998 9999998764
No 441
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=93.87 E-value=0.32 Score=47.44 Aligned_cols=89 Identities=11% Similarity=0.110 Sum_probs=58.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeC-----CHHHhc---
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATT-----DAKTAL--- 197 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~-~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~t-----d~~eal--- 197 (420)
..+|.|+|+|.+|...+..+...| . +|++.++++++.+.+++.|... +.... +..+.+
T Consensus 172 g~~VlV~GaG~vG~~aiqlak~~G--a~~Vi~~~~~~~~~~~a~~lGa~~-----------vi~~~~~~~~~~~~~i~~~ 238 (356)
T 1pl8_A 172 GHKVLVCGAGPIGMVTLLVAKAMG--AAQVVVTDLSATRLSKAKEIGADL-----------VLQISKESPQEIARKVEGQ 238 (356)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT--CSEEEEEESCHHHHHHHHHTTCSE-----------EEECSSCCHHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcC--CCEEEEECCCHHHHHHHHHhCCCE-----------EEcCcccccchHHHHHHHH
Confidence 468999999999999888777777 6 8999999998888777655321 11111 111111
Q ss_pred --cCCcEEEEccChh-hHHHHHHHhhhcCCCCCeEEEe
Q 014700 198 --LGADYCLHAMPVQ-FSSSFLEGISDYVDPGLPFISL 232 (420)
Q Consensus 198 --~~aDiVIlaVp~~-~l~~vl~~i~~~l~~~~iVVs~ 232 (420)
.+.|+||-++... .+...+ ..++++..++.+
T Consensus 239 ~~~g~D~vid~~g~~~~~~~~~----~~l~~~G~iv~~ 272 (356)
T 1pl8_A 239 LGCKPEVTIECTGAEASIQAGI----YATRSGGTLVLV 272 (356)
T ss_dssp HTSCCSEEEECSCCHHHHHHHH----HHSCTTCEEEEC
T ss_pred hCCCCCEEEECCCChHHHHHHH----HHhcCCCEEEEE
Confidence 3689999999864 344443 344555555544
No 442
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=93.84 E-value=0.038 Score=53.61 Aligned_cols=32 Identities=38% Similarity=0.583 Sum_probs=29.9
Q ss_pred eEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCH
Q 014700 129 KVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (420)
Q Consensus 129 kI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~ 162 (420)
-|.|||+|..|.+.|..|+++| ++|+++++.+
T Consensus 6 DViIVGaGpaGl~~A~~La~~G--~~V~v~Er~~ 37 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYG--LKTLMIEKRP 37 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--CCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCC--CcEEEEeCCC
Confidence 4999999999999999999999 9999999865
No 443
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=93.76 E-value=0.19 Score=44.47 Aligned_cols=44 Identities=14% Similarity=0.186 Sum_probs=37.3
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhc
Q 014700 127 TNKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKH 172 (420)
Q Consensus 127 ~mkI~IIG-aGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g 172 (420)
.++|.|+| +|.+|.+++..+...| .+|++.++++++.+.+.+.|
T Consensus 39 g~~vlV~Ga~ggiG~~~~~~~~~~G--~~V~~~~~~~~~~~~~~~~g 83 (198)
T 1pqw_A 39 GERVLIHSATGGVGMAAVSIAKMIG--ARIYTTAGSDAKREMLSRLG 83 (198)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHHT--CEEEEEESSHHHHHHHHTTC
T ss_pred CCEEEEeeCCChHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHcC
Confidence 47899999 5999999999999888 89999999988776665533
No 444
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=93.74 E-value=0.45 Score=44.23 Aligned_cols=42 Identities=21% Similarity=0.240 Sum_probs=35.5
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHH
Q 014700 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (420)
Q Consensus 127 ~mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~ 170 (420)
.+++.|.|+ |-+|.++|..|++.| ++|.+.+|+++..+.+.+
T Consensus 8 ~k~~lVTGas~GIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~ 50 (265)
T 3lf2_A 8 EAVAVVTGGSSGIGLATVELLLEAG--AAVAFCARDGERLRAAES 50 (265)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH
Confidence 467888885 899999999999998 899999999887665544
No 445
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=93.71 E-value=0.48 Score=40.46 Aligned_cols=97 Identities=13% Similarity=0.128 Sum_probs=59.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhc----cCCcE
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL----LGADY 202 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal----~~aDi 202 (420)
.++|.-||+|. |. ++..|++...+.+|+.+|.+++.++..++.-.. ..++.++....|..+.+ ...|+
T Consensus 26 ~~~vldiG~G~-G~-~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~------~~~~~~~~~~~d~~~~~~~~~~~~D~ 97 (178)
T 3hm2_A 26 HETLWDIGGGS-GS-IAIEWLRSTPQTTAVCFEISEERRERILSNAIN------LGVSDRIAVQQGAPRAFDDVPDNPDV 97 (178)
T ss_dssp TEEEEEESTTT-TH-HHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHT------TTCTTSEEEECCTTGGGGGCCSCCSE
T ss_pred CCeEEEeCCCC-CH-HHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHH------hCCCCCEEEecchHhhhhccCCCCCE
Confidence 46899999997 43 455555541127999999999877666553111 01111232222321222 46899
Q ss_pred EEEccChhhHHHHHHHhhhcCCCCCeEEEe
Q 014700 203 CLHAMPVQFSSSFLEGISDYVDPGLPFISL 232 (420)
Q Consensus 203 VIlaVp~~~l~~vl~~i~~~l~~~~iVVs~ 232 (420)
|++.-.... ..+++++...++++..++..
T Consensus 98 i~~~~~~~~-~~~l~~~~~~L~~gG~l~~~ 126 (178)
T 3hm2_A 98 IFIGGGLTA-PGVFAAAWKRLPVGGRLVAN 126 (178)
T ss_dssp EEECC-TTC-TTHHHHHHHTCCTTCEEEEE
T ss_pred EEECCcccH-HHHHHHHHHhcCCCCEEEEE
Confidence 998776554 66788888888888776543
No 446
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=93.68 E-value=0.28 Score=44.82 Aligned_cols=41 Identities=12% Similarity=0.184 Sum_probs=35.3
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH
Q 014700 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSIN 169 (420)
Q Consensus 127 ~mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~ 169 (420)
.++|.|.|+ |.+|.+++..|++.| ++|++.+|+++..+.+.
T Consensus 11 ~~~vlVtGasggiG~~la~~l~~~G--~~V~~~~r~~~~~~~~~ 52 (255)
T 1fmc_A 11 GKCAIITGAGAGIGKEIAITFATAG--ASVVVSDINADAANHVV 52 (255)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHTTT--CEEEEEESCHHHHHHHH
T ss_pred CCEEEEECCccHHHHHHHHHHHHCC--CEEEEEcCCHHHHHHHH
Confidence 478999996 999999999999998 89999999987665544
No 447
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=93.66 E-value=0.087 Score=50.48 Aligned_cols=33 Identities=15% Similarity=0.341 Sum_probs=29.5
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhcCCCCeEEEEeCC
Q 014700 127 TNKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRD 161 (420)
Q Consensus 127 ~mkI~IIG-aGamG~alA~~La~aG~~~~V~l~~r~ 161 (420)
||+|.|.| .|.+|..++..|++.| ++|++.+|.
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g--~~V~~~~r~ 34 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQG--IDLIVFDNL 34 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTT--CEEEEEECC
T ss_pred CcEEEEeCCCchhHHHHHHHHHhCC--CEEEEEeCC
Confidence 57999999 5999999999999998 999999874
No 448
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=93.64 E-value=0.13 Score=49.18 Aligned_cols=35 Identities=23% Similarity=0.368 Sum_probs=31.4
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhcCCCCeEEEEeCCHH
Q 014700 127 TNKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRDPA 163 (420)
Q Consensus 127 ~mkI~IIG-aGamG~alA~~La~aG~~~~V~l~~r~~~ 163 (420)
+|+|.|.| +|-+|++++..|.+.| ++|++..|+.+
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G--~~V~~~~r~~~ 44 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKG--YAVNTTVRDPD 44 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTT--CEEEEEESCTT
T ss_pred CCEEEEECCchHHHHHHHHHHHHCC--CEEEEEEcCcc
Confidence 57999999 5999999999999998 99998888754
No 449
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=93.64 E-value=0.059 Score=53.31 Aligned_cols=34 Identities=26% Similarity=0.463 Sum_probs=31.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCH
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~ 162 (420)
.++|.|||+|..|.++|..|++.| ++|+++++.+
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G--~~v~v~E~~~ 38 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAG--VDVDVYERSP 38 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhCC--CCEEEEecCC
Confidence 468999999999999999999998 8999998764
No 450
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=93.64 E-value=0.45 Score=43.90 Aligned_cols=42 Identities=19% Similarity=0.256 Sum_probs=35.8
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHH
Q 014700 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (420)
Q Consensus 127 ~mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~ 170 (420)
.++|.|.|+ |.+|.++|..|++.| ++|.+.+|+++..+.+.+
T Consensus 12 ~k~vlVTGas~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~ 54 (252)
T 3f1l_A 12 DRIILVTGASDGIGREAAMTYARYG--ATVILLGRNEEKLRQVAS 54 (252)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH
Confidence 467888886 899999999999998 899999999887665543
No 451
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=93.63 E-value=0.33 Score=44.33 Aligned_cols=42 Identities=19% Similarity=0.215 Sum_probs=35.9
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHH
Q 014700 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (420)
Q Consensus 127 ~mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~ 170 (420)
.++|.|.|+ |.+|.++|..|++.| ++|.+.+|+++..+.+.+
T Consensus 5 ~k~vlITGas~gIG~~~a~~l~~~G--~~v~~~~r~~~~~~~~~~ 47 (247)
T 3lyl_A 5 EKVALVTGASRGIGFEVAHALASKG--ATVVGTATSQASAEKFEN 47 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH
Confidence 467888895 899999999999998 899999999887666544
No 452
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=93.61 E-value=0.31 Score=44.72 Aligned_cols=41 Identities=22% Similarity=0.285 Sum_probs=34.8
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH
Q 014700 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSIN 169 (420)
Q Consensus 127 ~mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~ 169 (420)
.++|.|.|+ |.+|.+++..|++.| ++|++.+|+++..+.+.
T Consensus 13 ~k~vlItGasggiG~~la~~l~~~G--~~V~~~~r~~~~~~~~~ 54 (260)
T 3awd_A 13 NRVAIVTGGAQNIGLACVTALAEAG--ARVIIADLDEAMATKAV 54 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHH
Confidence 467999985 999999999999998 89999999987655443
No 453
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=93.60 E-value=0.21 Score=48.22 Aligned_cols=96 Identities=19% Similarity=0.240 Sum_probs=60.8
Q ss_pred CCCeEEEEcccHHHHHHHHHHHh-cCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEE-eCCHHHh-ccCCcE
Q 014700 126 RTNKVVVLGGGSFGTAMAAHVAN-KKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIA-TTDAKTA-LLGADY 202 (420)
Q Consensus 126 ~~mkI~IIGaGamG~alA~~La~-aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a-~td~~ea-l~~aDi 202 (420)
..++|..||+|..|.+. ..+++ .| .+|+.+|.+++.++..++..... .+ .++.+ ..|..+. -...|+
T Consensus 122 ~g~rVLDIGcG~G~~ta-~~lA~~~g--a~V~gIDis~~~l~~Ar~~~~~~------gl-~~v~~v~gDa~~l~d~~FDv 191 (298)
T 3fpf_A 122 RGERAVFIGGGPLPLTG-ILLSHVYG--MRVNVVEIEPDIAELSRKVIEGL------GV-DGVNVITGDETVIDGLEFDV 191 (298)
T ss_dssp TTCEEEEECCCSSCHHH-HHHHHTTC--CEEEEEESSHHHHHHHHHHHHHH------TC-CSEEEEESCGGGGGGCCCSE
T ss_pred CcCEEEEECCCccHHHH-HHHHHccC--CEEEEEECCHHHHHHHHHHHHhc------CC-CCeEEEECchhhCCCCCcCE
Confidence 45799999999865332 22333 35 79999999998776655431100 01 13332 2233322 246899
Q ss_pred EEEccChhhHHHHHHHhhhcCCCCCeEEE
Q 014700 203 CLHAMPVQFSSSFLEGISDYVDPGLPFIS 231 (420)
Q Consensus 203 VIlaVp~~~l~~vl~~i~~~l~~~~iVVs 231 (420)
|+++.-......+++++...++++..++.
T Consensus 192 V~~~a~~~d~~~~l~el~r~LkPGG~Lvv 220 (298)
T 3fpf_A 192 LMVAALAEPKRRVFRNIHRYVDTETRIIY 220 (298)
T ss_dssp EEECTTCSCHHHHHHHHHHHCCTTCEEEE
T ss_pred EEECCCccCHHHHHHHHHHHcCCCcEEEE
Confidence 99876555667888999999998876654
No 454
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=93.60 E-value=0.21 Score=48.98 Aligned_cols=83 Identities=14% Similarity=0.006 Sum_probs=56.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHh----c--cCC
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTA----L--LGA 200 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~ea----l--~~a 200 (420)
..+|.|+|+|.+|.+.+..+...| .+|++.++++++.+.+++.|.....-.. ..+..+. . .+.
T Consensus 190 g~~VlV~G~G~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~~lGa~~vi~~~---------~~~~~~~v~~~~~g~g~ 258 (363)
T 3uog_A 190 GDRVVVQGTGGVALFGLQIAKATG--AEVIVTSSSREKLDRAFALGADHGINRL---------EEDWVERVYALTGDRGA 258 (363)
T ss_dssp TCEEEEESSBHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHTCSEEEETT---------TSCHHHHHHHHHTTCCE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcC--CEEEEEecCchhHHHHHHcCCCEEEcCC---------cccHHHHHHHHhCCCCc
Confidence 368999999999999888888877 7999999999888887776542110000 0122221 1 257
Q ss_pred cEEEEccChhhHHHHHHHhh
Q 014700 201 DYCLHAMPVQFSSSFLEGIS 220 (420)
Q Consensus 201 DiVIlaVp~~~l~~vl~~i~ 220 (420)
|+||-++....+...++.+.
T Consensus 259 D~vid~~g~~~~~~~~~~l~ 278 (363)
T 3uog_A 259 DHILEIAGGAGLGQSLKAVA 278 (363)
T ss_dssp EEEEEETTSSCHHHHHHHEE
T ss_pred eEEEECCChHHHHHHHHHhh
Confidence 89988888666666555444
No 455
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=93.53 E-value=0.45 Score=46.63 Aligned_cols=93 Identities=12% Similarity=0.028 Sum_probs=57.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhc-----cCC
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL-----LGA 200 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~-~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal-----~~a 200 (420)
..+|.|+|+|.+|...+..+...| . .|+..++++++.+.+++.|...... ... ...+..+.+ ..+
T Consensus 192 g~~VlV~GaG~vG~~aiqlak~~G--a~~Vi~~~~~~~~~~~a~~lGa~~vi~----~~~---~~~~~~~~i~~~t~gg~ 262 (373)
T 1p0f_A 192 GSTCAVFGLGGVGFSAIVGCKAAG--ASRIIGVGTHKDKFPKAIELGATECLN----PKD---YDKPIYEVICEKTNGGV 262 (373)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHT--CSEEEEECSCGGGHHHHHHTTCSEEEC----GGG---CSSCHHHHHHHHTTSCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHcC--CCeEEEECCCHHHHHHHHHcCCcEEEe----ccc---ccchHHHHHHHHhCCCC
Confidence 368999999999999888877777 6 7999999988888777655321100 000 001222222 268
Q ss_pred cEEEEccCh-hhHHHHHHHhhhcCCCC-CeEEEe
Q 014700 201 DYCLHAMPV-QFSSSFLEGISDYVDPG-LPFISL 232 (420)
Q Consensus 201 DiVIlaVp~-~~l~~vl~~i~~~l~~~-~iVVs~ 232 (420)
|+||-++.. ..+...+ ..++++ -.++.+
T Consensus 263 Dvvid~~g~~~~~~~~~----~~l~~~~G~iv~~ 292 (373)
T 1p0f_A 263 DYAVECAGRIETMMNAL----QSTYCGSGVTVVL 292 (373)
T ss_dssp SEEEECSCCHHHHHHHH----HTBCTTTCEEEEC
T ss_pred CEEEECCCCHHHHHHHH----HHHhcCCCEEEEE
Confidence 999999975 3344333 444555 444443
No 456
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=93.47 E-value=0.4 Score=44.69 Aligned_cols=42 Identities=17% Similarity=0.136 Sum_probs=35.6
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHH
Q 014700 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (420)
Q Consensus 127 ~mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~ 170 (420)
.++|.|.|+ |.+|.+++..|++.| ++|++.+|+++..+.+.+
T Consensus 31 ~k~vlITGasggIG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~ 73 (272)
T 1yb1_A 31 GEIVLITGAGHGIGRLTAYEFAKLK--SKLVLWDINKHGLEETAA 73 (272)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC--CEEEEEEcCHHHHHHHHH
Confidence 468999985 899999999999998 899999999876655443
No 457
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=93.47 E-value=0.055 Score=53.53 Aligned_cols=33 Identities=30% Similarity=0.469 Sum_probs=30.6
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCH
Q 014700 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (420)
Q Consensus 128 mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~ 162 (420)
++|.|||+|..|.+.|..|++.| ++|+++++.+
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G--~~V~v~E~~~ 38 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSG--FKVKIVEKQK 38 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTT--CCEEEECSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhCC--CCEEEEeCCC
Confidence 58999999999999999999998 8999999864
No 458
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=93.47 E-value=0.24 Score=45.51 Aligned_cols=42 Identities=21% Similarity=0.233 Sum_probs=35.3
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHh-cCCCCeEEEEeCCHHHHHHHH
Q 014700 126 RTNKVVVLGG-GSFGTAMAAHVAN-KKSQLKVYMLMRDPAVCQSIN 169 (420)
Q Consensus 126 ~~mkI~IIGa-GamG~alA~~La~-aG~~~~V~l~~r~~~~~~~i~ 169 (420)
.+++|.|.|+ |.+|.+++..|++ .| ++|++.+|+.+..+.+.
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g--~~V~~~~r~~~~~~~~~ 46 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFS--GDVVLTARDVTRGQAAV 46 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSS--SEEEEEESSHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcC--CeEEEEeCChHHHHHHH
Confidence 3568899985 9999999999999 88 89999999987655543
No 459
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=93.46 E-value=0.067 Score=53.15 Aligned_cols=34 Identities=21% Similarity=0.443 Sum_probs=31.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCH
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~ 162 (420)
.|+|+|||+|..|.+.|..|++.| ++|+++++++
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g--~~v~v~E~~~ 36 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKG--HQVHIIDQRD 36 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTT--CEEEEEESSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCC--CcEEEEEecC
Confidence 379999999999999999999998 9999999865
No 460
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=93.46 E-value=0.24 Score=48.01 Aligned_cols=82 Identities=15% Similarity=0.054 Sum_probs=55.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHh----ccCCcE
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTA----LLGADY 202 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~ea----l~~aDi 202 (420)
..+|.|+|+|.+|.+.+..+...| .+|+..++++++.+.+++.|.... + ... ..+..+. ..+.|+
T Consensus 165 g~~VlV~GaG~vG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~lGa~~~-~---d~~-----~~~~~~~~~~~~~~~d~ 233 (339)
T 1rjw_A 165 GEWVAIYGIGGLGHVAVQYAKAMG--LNVVAVDIGDEKLELAKELGADLV-V---NPL-----KEDAAKFMKEKVGGVHA 233 (339)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTT--CEEEEECSCHHHHHHHHHTTCSEE-E---CTT-----TSCHHHHHHHHHSSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHCCCCEE-e---cCC-----CccHHHHHHHHhCCCCE
Confidence 468999999999999999888888 799999999988887776553210 0 000 0122221 246899
Q ss_pred EEEccCh-hhHHHHHHHh
Q 014700 203 CLHAMPV-QFSSSFLEGI 219 (420)
Q Consensus 203 VIlaVp~-~~l~~vl~~i 219 (420)
||-++.. ..++..++.+
T Consensus 234 vid~~g~~~~~~~~~~~l 251 (339)
T 1rjw_A 234 AVVTAVSKPAFQSAYNSI 251 (339)
T ss_dssp EEESSCCHHHHHHHHHHE
T ss_pred EEECCCCHHHHHHHHHHh
Confidence 9999885 4454444443
No 461
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=93.44 E-value=0.17 Score=49.06 Aligned_cols=82 Identities=20% Similarity=0.086 Sum_probs=54.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhc----cCCcE
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL----LGADY 202 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal----~~aDi 202 (420)
..+|.|+|+|.+|.+.+..+...| .+|+..++++++.+.+++.|........ ..+..+.+ ...|+
T Consensus 167 g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~~lGa~~~i~~~---------~~~~~~~~~~~~g~~d~ 235 (340)
T 3s2e_A 167 GQWVVISGIGGLGHVAVQYARAMG--LRVAAVDIDDAKLNLARRLGAEVAVNAR---------DTDPAAWLQKEIGGAHG 235 (340)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHTTCSEEEETT---------TSCHHHHHHHHHSSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHHHHcCCCEEEeCC---------CcCHHHHHHHhCCCCCE
Confidence 468999999999999888888887 7999999999988888776532110000 01222222 36899
Q ss_pred EEEccCh-hhHHHHHHHh
Q 014700 203 CLHAMPV-QFSSSFLEGI 219 (420)
Q Consensus 203 VIlaVp~-~~l~~vl~~i 219 (420)
||.++.. ..+...++.+
T Consensus 236 vid~~g~~~~~~~~~~~l 253 (340)
T 3s2e_A 236 VLVTAVSPKAFSQAIGMV 253 (340)
T ss_dssp EEESSCCHHHHHHHHHHE
T ss_pred EEEeCCCHHHHHHHHHHh
Confidence 9998874 3344444443
No 462
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=93.40 E-value=0.28 Score=44.54 Aligned_cols=42 Identities=19% Similarity=0.240 Sum_probs=35.7
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHH
Q 014700 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (420)
Q Consensus 127 ~mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~ 170 (420)
+++|.|.|+ |.+|.++|..|++.| ++|.+.+|+.+..+.+.+
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~ 44 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDG--YALALGARSVDRLEKIAH 44 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH
Confidence 467888995 889999999999998 899999999887665543
No 463
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=93.39 E-value=0.3 Score=44.82 Aligned_cols=42 Identities=19% Similarity=0.296 Sum_probs=36.3
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHH
Q 014700 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (420)
Q Consensus 127 ~mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~ 170 (420)
.++|.|.|+ |.+|.++|..|++.| ++|.+.+|+++..+.+.+
T Consensus 9 ~k~vlITGas~giG~~~a~~l~~~G--~~V~~~~r~~~~~~~~~~ 51 (253)
T 3qiv_A 9 NKVGIVTGSGGGIGQAYAEALAREG--AAVVVADINAEAAEAVAK 51 (253)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC--CEEEEEcCCHHHHHHHHH
Confidence 467889996 899999999999998 899999999887766554
No 464
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=93.38 E-value=0.059 Score=52.51 Aligned_cols=34 Identities=26% Similarity=0.447 Sum_probs=31.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCH
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~ 162 (420)
..+|.|||+|..|.+.|..|++.| ++|+++++..
T Consensus 17 ~~dvvIIGgG~~Gl~~A~~La~~G--~~V~llE~~~ 50 (382)
T 1ryi_A 17 HYEAVVIGGGIIGSAIAYYLAKEN--KNTALFESGT 50 (382)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT--CCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHhCC--CcEEEEeCCC
Confidence 468999999999999999999998 8999999753
No 465
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=93.38 E-value=0.055 Score=53.25 Aligned_cols=34 Identities=18% Similarity=0.402 Sum_probs=31.3
Q ss_pred CeEEEEcccHHHHHHHHHHHhc--CCCCeEEEEeCCHH
Q 014700 128 NKVVVLGGGSFGTAMAAHVANK--KSQLKVYMLMRDPA 163 (420)
Q Consensus 128 mkI~IIGaGamG~alA~~La~a--G~~~~V~l~~r~~~ 163 (420)
|+|.|||+|..|.++|..|++. | ++|+++++.+.
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G--~~V~v~E~~~~ 36 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPL--WAIDIVEKNDE 36 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTT--SEEEEECSSCT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCC--CCEEEEECCCC
Confidence 5899999999999999999998 8 89999998754
No 466
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=93.35 E-value=0.32 Score=47.77 Aligned_cols=93 Identities=12% Similarity=0.073 Sum_probs=57.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhc-----cCC
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL-----LGA 200 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~-~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal-----~~a 200 (420)
..+|.|+|+|.+|...+..+...| . +|+..++++++.+.+++.|..... ... ....+..+.+ ..+
T Consensus 196 g~~VlV~GaG~vG~~aiqlak~~G--a~~Vi~~~~~~~~~~~a~~lGa~~vi------~~~-~~~~~~~~~v~~~~~~g~ 266 (376)
T 1e3i_A 196 GSTCAVFGLGCVGLSAIIGCKIAG--ASRIIAIDINGEKFPKAKALGATDCL------NPR-ELDKPVQDVITELTAGGV 266 (376)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT--CSEEEEECSCGGGHHHHHHTTCSEEE------CGG-GCSSCHHHHHHHHHTSCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHcC--CCeEEEEcCCHHHHHHHHHhCCcEEE------ccc-cccchHHHHHHHHhCCCc
Confidence 358999999999999888877777 6 799999999888877765532110 000 0001222222 268
Q ss_pred cEEEEccCh-hhHHHHHHHhhhcCCCC-CeEEEe
Q 014700 201 DYCLHAMPV-QFSSSFLEGISDYVDPG-LPFISL 232 (420)
Q Consensus 201 DiVIlaVp~-~~l~~vl~~i~~~l~~~-~iVVs~ 232 (420)
|+||-++.. ..+...+ ..++++ -.++.+
T Consensus 267 Dvvid~~G~~~~~~~~~----~~l~~~~G~iv~~ 296 (376)
T 1e3i_A 267 DYSLDCAGTAQTLKAAV----DCTVLGWGSCTVV 296 (376)
T ss_dssp SEEEESSCCHHHHHHHH----HTBCTTTCEEEEC
T ss_pred cEEEECCCCHHHHHHHH----HHhhcCCCEEEEE
Confidence 999999975 3344433 444454 444443
No 467
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=93.34 E-value=0.49 Score=43.12 Aligned_cols=42 Identities=24% Similarity=0.301 Sum_probs=36.3
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHH
Q 014700 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (420)
Q Consensus 127 ~mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~ 170 (420)
.++|.|.|+ |.+|.++|..|++.| ++|.+.+|+++..+.+.+
T Consensus 14 ~k~vlITGas~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~ 56 (247)
T 3i1j_A 14 GRVILVTGAARGIGAAAARAYAAHG--ASVVLLGRTEASLAEVSD 56 (247)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCC--CEEEEEecCHHHHHHHHH
Confidence 468899996 899999999999998 899999999887666544
No 468
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=93.31 E-value=0.068 Score=52.13 Aligned_cols=34 Identities=26% Similarity=0.390 Sum_probs=30.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCH
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~ 162 (420)
.++|.|||+|..|.+.|..|++.| ++|+++++.+
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G--~~V~vie~~~ 36 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQG--VKTLLVDAFD 36 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTT--CCEEEECSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCC--CeEEEEeCCC
Confidence 358999999999999999999998 8999998753
No 469
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=93.29 E-value=0.066 Score=53.17 Aligned_cols=34 Identities=26% Similarity=0.286 Sum_probs=30.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHh---cCCCCeEEEEeCCH
Q 014700 127 TNKVVVLGGGSFGTAMAAHVAN---KKSQLKVYMLMRDP 162 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~---aG~~~~V~l~~r~~ 162 (420)
|++|.|||+|..|.+.|..|++ .| ++|+++++++
T Consensus 1 m~~VvIIGgG~aGl~aA~~L~~~~~~g--~~V~vie~~~ 37 (409)
T 3h8l_A 1 MTKVLVLGGRFGALTAAYTLKRLVGSK--ADVKVINKSR 37 (409)
T ss_dssp -CEEEEECSSHHHHHHHHHHHHHHGGG--SEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCC--CeEEEEeCCC
Confidence 4789999999999999999999 77 8999999875
No 470
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=93.29 E-value=0.42 Score=44.42 Aligned_cols=82 Identities=12% Similarity=0.094 Sum_probs=55.1
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEE
Q 014700 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (420)
Q Consensus 127 ~mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIl 205 (420)
.+++.|.|+ |-+|.++|..|++.| ++|.+.+|+.+..+.+.+. +.+ .+.++.++
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~---------------------~~~--~~~~~~~~ 65 (264)
T 3ucx_A 11 DKVVVISGVGPALGTTLARRCAEQG--ADLVLAARTVERLEDVAKQ---------------------VTD--TGRRALSV 65 (264)
T ss_dssp TCEEEEESCCTTHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHH---------------------HHH--TTCCEEEE
T ss_pred CcEEEEECCCcHHHHHHHHHHHHCc--CEEEEEeCCHHHHHHHHHH---------------------HHh--cCCcEEEE
Confidence 467889996 789999999999999 8999999998876665542 111 12233333
Q ss_pred ccC---hhhHHHHHHHhhhcCCCCCeEEEec
Q 014700 206 AMP---VQFSSSFLEGISDYVDPGLPFISLS 233 (420)
Q Consensus 206 aVp---~~~l~~vl~~i~~~l~~~~iVVs~s 233 (420)
..- ...++.+++++...+.+=.++|+..
T Consensus 66 ~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nA 96 (264)
T 3ucx_A 66 GTDITDDAQVAHLVDETMKAYGRVDVVINNA 96 (264)
T ss_dssp ECCTTCHHHHHHHHHHHHHHTSCCSEEEECC
T ss_pred EcCCCCHHHHHHHHHHHHHHcCCCcEEEECC
Confidence 322 3456777777766555445666654
No 471
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=93.27 E-value=0.07 Score=52.33 Aligned_cols=34 Identities=24% Similarity=0.318 Sum_probs=31.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCH
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~ 162 (420)
.++|.|||+|..|.++|..|++.| ++|+++++.+
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G--~~v~viE~~~ 44 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNG--WDVRLHEKSS 44 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC--CCEEEEecCC
Confidence 468999999999999999999998 8999999764
No 472
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=93.23 E-value=0.065 Score=51.18 Aligned_cols=34 Identities=21% Similarity=0.294 Sum_probs=30.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCH
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~ 162 (420)
+++|.|||+|..|.+.|..|++.| ++|+++++.+
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g--~~v~lie~~~ 38 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMRG--LSFRFVDPLP 38 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT--CCEEEEESSS
T ss_pred cCcEEEECCCHHHHHHHHHHHhCC--CCEEEEeCCC
Confidence 468999999999999999999988 8999999864
No 473
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=93.23 E-value=0.11 Score=50.00 Aligned_cols=33 Identities=21% Similarity=0.295 Sum_probs=29.9
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCC
Q 014700 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRD 161 (420)
Q Consensus 127 ~mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r~ 161 (420)
+|+|.|.|+ |.+|..++..|++.| ++|++++|.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~ 35 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAG--YLPVVIDNF 35 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTT--CCEEEEECS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEecC
Confidence 479999995 999999999999998 999999874
No 474
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=93.22 E-value=0.033 Score=57.65 Aligned_cols=63 Identities=25% Similarity=0.265 Sum_probs=45.2
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEEE
Q 014700 127 TNKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCLH 205 (420)
Q Consensus 127 ~mkI~IIG-aGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVIl 205 (420)
+|||.|.| .|.+|..++..|.+.| ++|++++|++...+. . .-+ + .+...+++.++|+||.
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G--~~V~~l~R~~~~~~~-----v----~~d--~------~~~~~~~l~~~D~Vih 207 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGG--HEVIQLVRKEPKPGK-----R----FWD--P------LNPASDLLDGADVLVH 207 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT--CEEEEEESSSCCTTC-----E----ECC--T------TSCCTTTTTTCSEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEECCCCCccc-----e----eec--c------cchhHHhcCCCCEEEE
Confidence 78999999 5999999999999998 999999998643110 0 000 0 0122455778999998
Q ss_pred ccC
Q 014700 206 AMP 208 (420)
Q Consensus 206 aVp 208 (420)
+..
T Consensus 208 ~A~ 210 (516)
T 3oh8_A 208 LAG 210 (516)
T ss_dssp CCC
T ss_pred CCC
Confidence 653
No 475
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=93.16 E-value=0.066 Score=54.75 Aligned_cols=32 Identities=25% Similarity=0.377 Sum_probs=29.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCC
Q 014700 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRD 161 (420)
Q Consensus 128 mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~ 161 (420)
.+|.|||+|.-|.+.|..|++.| ++|+++++.
T Consensus 26 ~dVvVIGgG~aGl~aA~~la~~G--~~V~liEk~ 57 (491)
T 3urh_A 26 YDLIVIGSGPGGYVCAIKAAQLG--MKVAVVEKR 57 (491)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT--CCEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHHCC--CeEEEEecC
Confidence 47999999999999999999998 899999975
No 476
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=93.14 E-value=0.07 Score=52.15 Aligned_cols=31 Identities=19% Similarity=0.425 Sum_probs=29.0
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhcCCCC-eEEEEeC
Q 014700 128 NKVVVLG-GGSFGTAMAAHVANKKSQL-KVYMLMR 160 (420)
Q Consensus 128 mkI~IIG-aGamG~alA~~La~aG~~~-~V~l~~r 160 (420)
|||.|.| .|.+|..++..|.+.| + +|+..+|
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g--~~~v~~~d~ 33 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTT--DHHIFEVHR 33 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHC--CCEEEECCT
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC--CCEEEEECC
Confidence 7999999 5999999999999998 7 9999998
No 477
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=93.11 E-value=0.45 Score=44.18 Aligned_cols=42 Identities=26% Similarity=0.268 Sum_probs=35.5
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHH
Q 014700 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (420)
Q Consensus 127 ~mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~ 170 (420)
.++|.|.|+ |-+|.++|..|++.| ++|.+.+|+++..+.+.+
T Consensus 10 ~k~vlVTGas~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~ 52 (262)
T 3pk0_A 10 GRSVVVTGGTKGIGRGIATVFARAG--ANVAVAGRSTADIDACVA 52 (262)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH
Confidence 467888884 899999999999999 899999999887665544
No 478
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=93.11 E-value=0.075 Score=49.47 Aligned_cols=33 Identities=15% Similarity=0.357 Sum_probs=30.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCC
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRD 161 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~ 161 (420)
+++|.|||+|.-|.+.|..|++.| ++|+++++.
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g--~~v~lie~~ 34 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRAR--KNILLVDAG 34 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTT--CCEEEEECC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCC--CCEEEEeCC
Confidence 358999999999999999999998 899999974
No 479
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=93.11 E-value=0.57 Score=43.71 Aligned_cols=41 Identities=24% Similarity=0.333 Sum_probs=35.1
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH
Q 014700 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSIN 169 (420)
Q Consensus 127 ~mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~ 169 (420)
.++|.|.|+ |.+|.+++..|++.| ++|++.+|+++..+.+.
T Consensus 32 ~k~vlVTGasggIG~~la~~l~~~G--~~V~~~~r~~~~~~~~~ 73 (279)
T 1xg5_A 32 DRLALVTGASGGIGAAVARALVQQG--LKVVGCARTVGNIEELA 73 (279)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC--CEEEEEECChHHHHHHH
Confidence 467899985 999999999999998 89999999987665544
No 480
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=93.08 E-value=0.61 Score=43.88 Aligned_cols=41 Identities=15% Similarity=0.255 Sum_probs=35.2
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH
Q 014700 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSIN 169 (420)
Q Consensus 127 ~mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~ 169 (420)
.++|.|.|+ |.+|.+++..|++.| ++|++.+|+++..+.+.
T Consensus 26 ~k~vlITGasggiG~~la~~L~~~G--~~V~~~~r~~~~~~~~~ 67 (302)
T 1w6u_A 26 GKVAFITGGGTGLGKGMTTLLSSLG--AQCVIASRKMDVLKATA 67 (302)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHH
Confidence 468999995 899999999999998 89999999987665544
No 481
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=93.04 E-value=0.56 Score=42.55 Aligned_cols=41 Identities=17% Similarity=0.223 Sum_probs=35.0
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH
Q 014700 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSIN 169 (420)
Q Consensus 127 ~mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~ 169 (420)
.++|.|.|+ |.+|.+++..|++.| ++|++.+|+++..+.+.
T Consensus 7 ~~~vlVtGasggiG~~la~~l~~~G--~~V~~~~r~~~~~~~~~ 48 (248)
T 2pnf_A 7 GKVSLVTGSTRGIGRAIAEKLASAG--STVIITGTSGERAKAVA 48 (248)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC--CEEEEEeCChHHHHHHH
Confidence 467889985 999999999999998 89999999987665544
No 482
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=93.04 E-value=0.35 Score=45.60 Aligned_cols=42 Identities=21% Similarity=0.327 Sum_probs=35.1
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHH
Q 014700 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (420)
Q Consensus 127 ~mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~ 170 (420)
.+++.|.|+ |.+|.++|..|++.| ++|.+.+|+++..+.+.+
T Consensus 33 gk~~lVTGas~GIG~aia~~la~~G--~~V~~~~r~~~~~~~~~~ 75 (281)
T 4dry_A 33 GRIALVTGGGTGVGRGIAQALSAEG--YSVVITGRRPDVLDAAAG 75 (281)
T ss_dssp -CEEEETTTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHH
Confidence 467888885 899999999999998 899999999887665544
No 483
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=93.02 E-value=0.52 Score=44.63 Aligned_cols=84 Identities=12% Similarity=0.168 Sum_probs=55.6
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCC---eEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcE
Q 014700 127 TNKVVVLGG-GSFGTAMAAHVANKKSQL---KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADY 202 (420)
Q Consensus 127 ~mkI~IIGa-GamG~alA~~La~aG~~~---~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDi 202 (420)
.++|.|.|+ |.+|.++|..|++.| + .|.+.+|+.+..+.+.+. +.+...+.++
T Consensus 33 ~k~~lVTGas~GIG~aia~~l~~~G--~~~~~V~~~~r~~~~~~~~~~~---------------------l~~~~~~~~~ 89 (287)
T 3rku_A 33 KKTVLITGASAGIGKATALEYLEAS--NGDMKLILAARRLEKLEELKKT---------------------IDQEFPNAKV 89 (287)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHHH--TTCSEEEEEESCHHHHHHHHHH---------------------HHHHCTTCEE
T ss_pred CCEEEEecCCChHHHHHHHHHHHcC--CCCceEEEEECCHHHHHHHHHH---------------------HHhhCCCCeE
Confidence 468889985 899999999999987 5 999999998877666542 1111112333
Q ss_pred EEEccC---hhhHHHHHHHhhhcCCCCCeEEEec
Q 014700 203 CLHAMP---VQFSSSFLEGISDYVDPGLPFISLS 233 (420)
Q Consensus 203 VIlaVp---~~~l~~vl~~i~~~l~~~~iVVs~s 233 (420)
.++..- ...++.+++++...+.+=.++|+..
T Consensus 90 ~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnA 123 (287)
T 3rku_A 90 HVAQLDITQAEKIKPFIENLPQEFKDIDILVNNA 123 (287)
T ss_dssp EEEECCTTCGGGHHHHHHTSCGGGCSCCEEEECC
T ss_pred EEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 333322 3567778887766555445666654
No 484
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=93.02 E-value=0.35 Score=44.97 Aligned_cols=42 Identities=14% Similarity=0.201 Sum_probs=34.4
Q ss_pred CCeEEEEccc---HHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHH
Q 014700 127 TNKVVVLGGG---SFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (420)
Q Consensus 127 ~mkI~IIGaG---amG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~ 170 (420)
.+.+.|-|++ -+|.++|..|++.| .+|.+.+|+++..+++.+
T Consensus 6 gK~alVTGaa~~~GIG~aiA~~la~~G--a~Vvi~~r~~~~~~~~~~ 50 (256)
T 4fs3_A 6 NKTYVIMGIANKRSIAFGVAKVLDQLG--AKLVFTYRKERSRKELEK 50 (256)
T ss_dssp TCEEEEECCCSTTCHHHHHHHHHHHTT--CEEEEEESSGGGHHHHHH
T ss_pred CCEEEEECCCCCchHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHH
Confidence 4567788874 59999999999999 899999999876665544
No 485
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=93.01 E-value=0.077 Score=53.50 Aligned_cols=34 Identities=35% Similarity=0.483 Sum_probs=30.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCC--eEEEEeCCH
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQL--KVYMLMRDP 162 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~--~V~l~~r~~ 162 (420)
+++|+|||+|..|.+.|..|+++| + +|+++..++
T Consensus 2 ~~dVvVIGaGiaGLsaA~~L~~~G--~~~~V~vlEa~~ 37 (477)
T 3nks_A 2 GRTVVVLGGGISGLAASYHLSRAP--CPPKVVLVESSE 37 (477)
T ss_dssp CCEEEEECCBHHHHHHHHHHHTSS--SCCEEEEECSSS
T ss_pred CceEEEECCcHHHHHHHHHHHhCC--CCCcEEEEeCCC
Confidence 479999999999999999999998 8 999998753
No 486
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=92.99 E-value=0.42 Score=44.15 Aligned_cols=42 Identities=17% Similarity=0.379 Sum_probs=35.9
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHH
Q 014700 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (420)
Q Consensus 127 ~mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~ 170 (420)
.+++.|.|+ |.+|.++|..|++.| ++|.+.+|+++..+.+.+
T Consensus 7 ~k~~lVTGas~GIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~ 49 (250)
T 3nyw_A 7 KGLAIITGASQGIGAVIAAGLATDG--YRVVLIARSKQNLEKVHD 49 (250)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHHT--CEEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHH
Confidence 467888895 899999999999999 899999999887666554
No 487
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=92.98 E-value=0.059 Score=52.64 Aligned_cols=33 Identities=36% Similarity=0.551 Sum_probs=30.9
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCH
Q 014700 128 NKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (420)
Q Consensus 128 mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~ 162 (420)
.+|.|||+|..|.+.|..|++.| ++|+++++.+
T Consensus 5 ~dVvIvG~G~aGl~~A~~La~~G--~~V~l~E~~~ 37 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAAKYG--LKTLMIEKRP 37 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--CCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCC--CCEEEEeCCC
Confidence 57999999999999999999998 8999999876
No 488
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=92.97 E-value=0.079 Score=52.89 Aligned_cols=34 Identities=29% Similarity=0.603 Sum_probs=30.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCH
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDP 162 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~-~V~l~~r~~ 162 (420)
...|.|||+|..|.+.|..|+++| + +|+++++.+
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~~G--~~~V~vlE~~~ 40 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLARRG--YTNVTVLDPYP 40 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTT--CCCEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHcC--CCcEEEEeCCC
Confidence 357999999999999999999998 8 999998764
No 489
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=92.93 E-value=0.9 Score=41.88 Aligned_cols=42 Identities=19% Similarity=0.285 Sum_probs=35.3
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHH
Q 014700 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (420)
Q Consensus 127 ~mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~ 170 (420)
.++|.|.|+ |.+|.+++..|++.| ++|.+.+|+++..+.+.+
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~ 49 (260)
T 2z1n_A 7 GKLAVVTAGSSGLGFASALELARNG--ARLLLFSRNREKLEAAAS 49 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH
Confidence 467888885 899999999999998 899999999876655443
No 490
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=92.92 E-value=0.13 Score=54.65 Aligned_cols=35 Identities=17% Similarity=0.336 Sum_probs=31.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCH
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~ 162 (420)
..+|.|||+|.+|+.++..|+..|. .+++++|.+.
T Consensus 17 ~s~VlVVGaGGLGsevak~La~aGV-G~ItlvD~D~ 51 (640)
T 1y8q_B 17 GGRVLVVGAGGIGCELLKNLVLTGF-SHIDLIDLDT 51 (640)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTC-CEEEEEECCB
T ss_pred cCeEEEECcCHHHHHHHHHHHHcCC-CeEEEecCCE
Confidence 4699999999999999999999995 4899998763
No 491
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=92.91 E-value=0.46 Score=46.59 Aligned_cols=93 Identities=10% Similarity=0.057 Sum_probs=57.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhc-----cCC
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL-----LGA 200 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~-~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal-----~~a 200 (420)
..+|.|+|+|.+|...+..+...| . .|+..++++++.+.+++.|...... ... ...+..+.+ ...
T Consensus 192 g~~VlV~GaG~vG~~a~qla~~~G--a~~Vi~~~~~~~~~~~~~~lGa~~vi~----~~~---~~~~~~~~~~~~~~~g~ 262 (374)
T 2jhf_A 192 GSTCAVFGLGGVGLSVIMGCKAAG--AARIIGVDINKDKFAKAKEVGATECVN----PQD---YKKPIQEVLTEMSNGGV 262 (374)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT--CSEEEEECSCGGGHHHHHHTTCSEEEC----GGG---CSSCHHHHHHHHTTSCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHcC--CCeEEEEcCCHHHHHHHHHhCCceEec----ccc---cchhHHHHHHHHhCCCC
Confidence 368999999999999888887777 6 7999999988887777655321000 000 001222222 258
Q ss_pred cEEEEccCh-hhHHHHHHHhhhcCCCC-CeEEEe
Q 014700 201 DYCLHAMPV-QFSSSFLEGISDYVDPG-LPFISL 232 (420)
Q Consensus 201 DiVIlaVp~-~~l~~vl~~i~~~l~~~-~iVVs~ 232 (420)
|+||-++.. ..+...++ .++++ -.++.+
T Consensus 263 D~vid~~g~~~~~~~~~~----~l~~~~G~iv~~ 292 (374)
T 2jhf_A 263 DFSFEVIGRLDTMVTALS----CCQEAYGVSVIV 292 (374)
T ss_dssp SEEEECSCCHHHHHHHHH----HBCTTTCEEEEC
T ss_pred cEEEECCCCHHHHHHHHH----HhhcCCcEEEEe
Confidence 999999985 34444443 34444 444443
No 492
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=92.89 E-value=0.29 Score=51.07 Aligned_cols=35 Identities=9% Similarity=0.119 Sum_probs=31.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCH
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRDP 162 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~~ 162 (420)
..||.|||+|.+|+.++..|+.+|. .+++++|.+.
T Consensus 32 ~~~VlvvG~GGlGseiak~La~aGV-g~itlvD~D~ 66 (531)
T 1tt5_A 32 SAHVCLINATATGTEILKNLVLPGI-GSFTIIDGNQ 66 (531)
T ss_dssp HCEEEEECCSHHHHHHHHHHHTTTC-SEEEEECCCB
T ss_pred cCeEEEECcCHHHHHHHHHHHHcCC-CeEEEEeCCE
Confidence 4699999999999999999999995 5899999764
No 493
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=92.88 E-value=0.35 Score=47.56 Aligned_cols=83 Identities=18% Similarity=0.187 Sum_probs=55.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhcc-------
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALL------- 198 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~-~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~------- 198 (420)
..+|.|+|+|.+|.+.+..+...| . .|++.++++++.+.+++.|........ ..+..+.+.
T Consensus 183 g~~VlV~GaG~vG~~aiqlak~~G--a~~Vi~~~~~~~~~~~a~~lGa~~vi~~~---------~~~~~~~i~~~~~~~~ 251 (370)
T 4ej6_A 183 GSTVAILGGGVIGLLTVQLARLAG--ATTVILSTRQATKRRLAEEVGATATVDPS---------AGDVVEAIAGPVGLVP 251 (370)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT--CSEEEEECSCHHHHHHHHHHTCSEEECTT---------SSCHHHHHHSTTSSST
T ss_pred CCEEEEECCCHHHHHHHHHHHHcC--CCEEEEECCCHHHHHHHHHcCCCEEECCC---------CcCHHHHHHhhhhccC
Confidence 468999999999998888877777 6 898999999888877776642110000 013322222
Q ss_pred -CCcEEEEccCh-hhHHHHHHHhh
Q 014700 199 -GADYCLHAMPV-QFSSSFLEGIS 220 (420)
Q Consensus 199 -~aDiVIlaVp~-~~l~~vl~~i~ 220 (420)
++|+||-++.. ..+...++.+.
T Consensus 252 gg~Dvvid~~G~~~~~~~~~~~l~ 275 (370)
T 4ej6_A 252 GGVDVVIECAGVAETVKQSTRLAK 275 (370)
T ss_dssp TCEEEEEECSCCHHHHHHHHHHEE
T ss_pred CCCCEEEECCCCHHHHHHHHHHhc
Confidence 58999999984 34555554443
No 494
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=92.84 E-value=0.26 Score=46.28 Aligned_cols=42 Identities=21% Similarity=0.295 Sum_probs=35.3
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHH
Q 014700 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (420)
Q Consensus 127 ~mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~ 170 (420)
.+++.|.|+ |-+|.++|..|++.| ++|.+.+|+++..+.+.+
T Consensus 26 gk~~lVTGas~gIG~aia~~la~~G--~~V~~~~r~~~~~~~~~~ 68 (271)
T 4ibo_A 26 GRTALVTGSSRGLGRAMAEGLAVAG--ARILINGTDPSRVAQTVQ 68 (271)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTT--CEEEECCSCHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH
Confidence 467888885 899999999999999 899999999887665543
No 495
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=92.83 E-value=0.49 Score=43.46 Aligned_cols=42 Identities=17% Similarity=0.256 Sum_probs=35.6
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHH
Q 014700 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINE 170 (420)
Q Consensus 127 ~mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~ 170 (420)
.+++.|.|+ |.+|.++|..|++.| ++|.+.+|+++..+.+.+
T Consensus 7 ~k~~lVTGas~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~ 49 (247)
T 2jah_A 7 GKVALITGASSGIGEATARALAAEG--AAVAIAARRVEKLRALGD 49 (247)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHH
Confidence 467889985 899999999999998 899999999877665543
No 496
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=92.83 E-value=0.28 Score=47.20 Aligned_cols=91 Identities=10% Similarity=0.024 Sum_probs=59.9
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHh----c--cC
Q 014700 127 TNKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTA----L--LG 199 (420)
Q Consensus 127 ~mkI~IIG-aGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~ea----l--~~ 199 (420)
..+|.|+| +|.+|.+.+..+...| .+|++.++++++.+.+++.|....... . ..+..+. . ..
T Consensus 141 g~~VlV~Ga~g~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~~Ga~~~~~~----~-----~~~~~~~~~~~~~~~g 209 (325)
T 3jyn_A 141 GEIILFHAAAGGVGSLACQWAKALG--AKLIGTVSSPEKAAHAKALGAWETIDY----S-----HEDVAKRVLELTDGKK 209 (325)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHHT--CEEEEEESSHHHHHHHHHHTCSEEEET----T-----TSCHHHHHHHHTTTCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHcCCCEEEeC----C-----CccHHHHHHHHhCCCC
Confidence 46899999 7999999999998888 799999999988888777653211000 0 0122221 1 25
Q ss_pred CcEEEEccChhhHHHHHHHhhhcCCCCCeEEEe
Q 014700 200 ADYCLHAMPVQFSSSFLEGISDYVDPGLPFISL 232 (420)
Q Consensus 200 aDiVIlaVp~~~l~~vl~~i~~~l~~~~iVVs~ 232 (420)
.|+||-++....+...++. ++++..++.+
T Consensus 210 ~Dvvid~~g~~~~~~~~~~----l~~~G~iv~~ 238 (325)
T 3jyn_A 210 CPVVYDGVGQDTWLTSLDS----VAPRGLVVSF 238 (325)
T ss_dssp EEEEEESSCGGGHHHHHTT----EEEEEEEEEC
T ss_pred ceEEEECCChHHHHHHHHH----hcCCCEEEEE
Confidence 8999999987655554443 3344444444
No 497
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=92.81 E-value=0.067 Score=50.81 Aligned_cols=35 Identities=23% Similarity=0.299 Sum_probs=31.3
Q ss_pred cCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCC
Q 014700 125 ERTNKVVVLGGGSFGTAMAAHVANKKSQLKVYMLMRD 161 (420)
Q Consensus 125 ~~~mkI~IIGaGamG~alA~~La~aG~~~~V~l~~r~ 161 (420)
+.+++|.|||+|..|.+.|..|++.| ++|+++++.
T Consensus 20 ~~~~~vvIIG~G~aGl~aA~~l~~~g--~~v~vie~~ 54 (338)
T 3itj_A 20 HVHNKVTIIGSGPAAHTAAIYLARAE--IKPILYEGM 54 (338)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTT--CCCEEECCS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCC--CCEEEEecC
Confidence 34579999999999999999999998 899999984
No 498
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=92.77 E-value=0.49 Score=46.35 Aligned_cols=93 Identities=13% Similarity=0.084 Sum_probs=58.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhc-----cCC
Q 014700 127 TNKVVVLGGGSFGTAMAAHVANKKSQL-KVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTAL-----LGA 200 (420)
Q Consensus 127 ~mkI~IIGaGamG~alA~~La~aG~~~-~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal-----~~a 200 (420)
..+|.|+|+|.+|...+..+...| . +|+..++++++.+.+++.|....+. ... ...+..+.+ ..+
T Consensus 191 g~~VlV~GaG~vG~~avqla~~~G--a~~Vi~~~~~~~~~~~~~~lGa~~vi~----~~~---~~~~~~~~v~~~~~~g~ 261 (373)
T 2fzw_A 191 GSVCAVFGLGGVGLAVIMGCKVAG--ASRIIGVDINKDKFARAKEFGATECIN----PQD---FSKPIQEVLIEMTDGGV 261 (373)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHT--CSEEEEECSCGGGHHHHHHHTCSEEEC----GGG---CSSCHHHHHHHHTTSCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHcC--CCeEEEEcCCHHHHHHHHHcCCceEec----ccc---ccccHHHHHHHHhCCCC
Confidence 358999999999999888887777 6 7999999988887777665421100 000 001222222 258
Q ss_pred cEEEEccChh-hHHHHHHHhhhcCCCC-CeEEEe
Q 014700 201 DYCLHAMPVQ-FSSSFLEGISDYVDPG-LPFISL 232 (420)
Q Consensus 201 DiVIlaVp~~-~l~~vl~~i~~~l~~~-~iVVs~ 232 (420)
|+||-++... .+...+ ..++++ ..++.+
T Consensus 262 D~vid~~g~~~~~~~~~----~~l~~~~G~iv~~ 291 (373)
T 2fzw_A 262 DYSFECIGNVKVMRAAL----EACHKGWGVSVVV 291 (373)
T ss_dssp SEEEECSCCHHHHHHHH----HTBCTTTCEEEEC
T ss_pred CEEEECCCcHHHHHHHH----HhhccCCcEEEEE
Confidence 9999999853 344333 444555 445443
No 499
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=92.77 E-value=0.15 Score=49.31 Aligned_cols=72 Identities=17% Similarity=0.217 Sum_probs=56.5
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHHhcCCCCCCCCCCCCCceEEeCCHHHhccCCcEEE
Q 014700 126 RTNKVVVLG-GGSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSINEKHCNCRYFPEQKLPENVIATTDAKTALLGADYCL 204 (420)
Q Consensus 126 ~~mkI~IIG-aGamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~~~g~~~~~l~~~~l~~~i~a~td~~eal~~aDiVI 204 (420)
..+++.||| ...+|.++|..|.+.+ ..|+++.... .|+++..+.||+||
T Consensus 178 ~Gk~vvViGRS~iVGkPla~LL~~~~--ATVTi~Hs~T----------------------------~dl~~~~~~ADIvV 227 (303)
T 4b4u_A 178 AGKHAVVVGRSAILGKPMAMMLLQAN--ATVTICHSRT----------------------------QNLPELVKQADIIV 227 (303)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHHTT--CEEEEECTTC----------------------------SSHHHHHHTCSEEE
T ss_pred CCCEEEEEeccccccchHHHHHHhcC--CEEEEecCCC----------------------------CCHHHHhhcCCeEE
Confidence 468999999 5778999999999987 8999875321 26777788999999
Q ss_pred EccChhhHHHHHHHhhhcCCCCCeEEEe
Q 014700 205 HAMPVQFSSSFLEGISDYVDPGLPFISL 232 (420)
Q Consensus 205 laVp~~~l~~vl~~i~~~l~~~~iVVs~ 232 (420)
.++....+ + -.++++++++||++
T Consensus 228 ~A~G~p~~---i--~~d~vk~GavVIDV 250 (303)
T 4b4u_A 228 GAVGKAEL---I--QKDWIKQGAVVVDA 250 (303)
T ss_dssp ECSCSTTC---B--CGGGSCTTCEEEEC
T ss_pred eccCCCCc---c--ccccccCCCEEEEe
Confidence 99875432 1 14678899999987
No 500
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=92.76 E-value=0.59 Score=43.78 Aligned_cols=41 Identities=17% Similarity=0.331 Sum_probs=34.6
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH
Q 014700 127 TNKVVVLGG-GSFGTAMAAHVANKKSQLKVYMLMRDPAVCQSIN 169 (420)
Q Consensus 127 ~mkI~IIGa-GamG~alA~~La~aG~~~~V~l~~r~~~~~~~i~ 169 (420)
.++|.|.|+ |.+|.++|..|++.| ++|.+.+|+++..+.+.
T Consensus 22 ~k~vlVTGas~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~ 63 (277)
T 2rhc_B 22 SEVALVTGATSGIGLEIARRLGKEG--LRVFVCARGEEGLRTTL 63 (277)
T ss_dssp SCEEEEETCSSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHH
Confidence 357888884 899999999999998 89999999987665543
Done!