Query 014702
Match_columns 420
No_of_seqs 143 out of 1304
Neff 10.6
Searched_HMMs 46136
Date Fri Mar 29 07:41:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014702.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014702hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK15493 5-methylthioadenosine 100.0 1.2E-51 2.6E-56 389.5 40.4 380 19-418 1-385 (435)
2 PRK06687 chlorohydrolase; Vali 100.0 1.4E-51 3E-56 389.3 39.0 379 21-418 2-385 (419)
3 PRK07228 N-ethylammeline chlor 100.0 1.9E-49 4.1E-54 378.0 40.3 383 19-416 1-385 (445)
4 PRK09045 N-ethylammeline chlor 100.0 4.7E-49 1E-53 374.1 40.9 386 15-418 3-390 (443)
5 TIGR03314 Se_ssnA putative sel 100.0 1E-48 2.3E-53 370.1 38.0 375 21-417 1-388 (441)
6 PRK07203 putative chlorohydrol 100.0 2.9E-48 6.2E-53 368.7 39.7 376 21-418 2-390 (442)
7 cd01303 GDEase Guanine deamina 100.0 5.6E-48 1.2E-52 364.2 37.5 374 28-410 14-393 (429)
8 PRK08204 hypothetical protein; 100.0 1.4E-47 3E-52 365.9 39.4 381 18-418 1-392 (449)
9 PRK12393 amidohydrolase; Provi 100.0 2.7E-47 5.9E-52 362.1 40.7 385 18-418 1-404 (457)
10 PRK06038 N-ethylammeline chlor 100.0 3.8E-47 8.2E-52 359.1 40.7 374 19-418 2-376 (430)
11 PRK06380 metal-dependent hydro 100.0 3.5E-47 7.7E-52 359.5 40.0 366 20-414 2-369 (418)
12 PRK08203 hydroxydechloroatrazi 100.0 3.5E-47 7.6E-52 362.5 40.1 383 21-418 4-400 (451)
13 PRK09228 guanine deaminase; Pr 100.0 2.6E-46 5.7E-51 352.6 39.3 375 19-410 2-390 (433)
14 PRK08393 N-ethylammeline chlor 100.0 4E-46 8.7E-51 351.8 39.8 374 19-418 1-375 (424)
15 cd01298 ATZ_TRZ_like TRZ/ATZ f 100.0 3.9E-46 8.3E-51 353.9 40.0 380 21-418 1-381 (411)
16 TIGR02967 guan_deamin guanine 100.0 1E-45 2.2E-50 347.9 38.6 361 37-414 3-369 (401)
17 PRK06151 N-ethylammeline chlor 100.0 9.4E-46 2E-50 354.5 37.9 378 20-418 2-413 (488)
18 PRK08418 chlorohydrolase; Prov 100.0 1.1E-45 2.5E-50 345.2 36.5 362 21-409 2-378 (408)
19 cd01313 Met_dep_hydrolase_E Me 100.0 4.9E-45 1.1E-49 343.1 33.8 360 36-415 6-392 (418)
20 cd01312 Met_dep_hydrolase_D Me 100.0 3.9E-44 8.4E-49 331.5 34.4 339 48-410 1-356 (381)
21 COG0402 SsnA Cytosine deaminas 100.0 3.1E-44 6.7E-49 338.3 34.3 376 19-415 2-382 (421)
22 PRK09229 N-formimino-L-glutama 100.0 1.9E-43 4.1E-48 336.4 31.9 370 20-414 4-401 (456)
23 KOG3968 Atrazine chlorohydrola 100.0 1.9E-43 4E-48 308.4 27.5 368 34-410 21-400 (439)
24 TIGR02022 hutF formiminoglutam 100.0 2.9E-42 6.2E-47 327.2 34.0 368 23-414 6-401 (455)
25 PRK07213 chlorohydrolase; Prov 100.0 2.8E-41 6E-46 313.4 35.0 346 21-419 2-354 (375)
26 PRK09356 imidazolonepropionase 100.0 2.7E-39 5.8E-44 305.3 31.0 359 17-413 1-385 (406)
27 COG1574 Predicted metal-depend 100.0 4.2E-38 9E-43 295.2 30.2 369 17-414 3-513 (535)
28 cd01293 Bact_CD Bacterial cyto 100.0 2.3E-38 4.9E-43 299.5 28.7 348 23-411 2-379 (398)
29 PRK14085 imidazolonepropionase 100.0 1.4E-37 2.9E-42 290.0 31.3 347 19-411 1-366 (382)
30 TIGR01224 hutI imidazoloneprop 100.0 1E-37 2.2E-42 291.8 29.4 336 39-414 2-360 (377)
31 PRK09230 cytosine deaminase; P 100.0 5.1E-37 1.1E-41 288.3 30.9 346 18-408 3-382 (426)
32 cd01296 Imidazolone-5PH Imidaz 100.0 7.2E-36 1.6E-40 278.9 27.5 336 43-415 1-357 (371)
33 PRK07572 cytosine deaminase; V 100.0 3.5E-35 7.5E-40 277.3 29.9 347 19-411 2-382 (426)
34 cd01314 D-HYD D-hydantoinases 100.0 7.8E-36 1.7E-40 284.9 21.3 340 21-411 1-399 (447)
35 PLN02942 dihydropyrimidinase 100.0 2.2E-34 4.8E-39 275.3 29.2 343 18-414 4-408 (486)
36 TIGR02033 D-hydantoinase D-hyd 100.0 1.1E-34 2.3E-39 278.2 23.2 336 21-411 1-401 (454)
37 PRK12394 putative metallo-depe 100.0 1.4E-33 3.1E-38 262.5 29.8 328 18-417 2-349 (379)
38 COG1228 HutI Imidazolonepropio 100.0 1.5E-34 3.2E-39 265.8 20.0 353 18-417 9-385 (406)
39 PRK08323 phenylhydantoinase; V 100.0 2.8E-34 6E-39 275.4 22.2 333 19-410 1-398 (459)
40 PRK05985 cytosine deaminase; P 100.0 2.3E-33 5E-38 262.9 27.2 349 18-414 1-371 (391)
41 PRK07583 cytosine deaminase-li 100.0 2.1E-32 4.7E-37 259.0 32.7 357 15-411 7-402 (438)
42 cd01299 Met_dep_hydrolase_A Me 100.0 1.6E-32 3.4E-37 253.7 23.8 294 68-412 1-338 (342)
43 cd01297 D-aminoacylase D-amino 100.0 7.8E-32 1.7E-36 253.7 28.0 328 20-415 1-381 (415)
44 PRK13309 ureC urease subunit a 100.0 8.3E-32 1.8E-36 252.9 22.0 333 18-414 67-449 (572)
45 cd01300 YtcJ_like YtcJ_like me 100.0 9.3E-31 2E-35 252.0 27.5 176 218-404 290-479 (479)
46 TIGR01975 isoAsp_dipep isoaspa 100.0 1.8E-30 3.9E-35 238.8 27.1 319 21-408 2-363 (389)
47 TIGR01792 urease_alph urease, 100.0 2E-30 4.3E-35 243.5 27.5 329 17-413 64-443 (567)
48 PRK09357 pyrC dihydroorotase; 100.0 1.1E-30 2.5E-35 247.4 25.4 328 20-411 2-385 (423)
49 PRK06846 putative deaminase; V 100.0 4.9E-30 1.1E-34 241.3 27.8 331 39-409 30-382 (410)
50 PRK15446 phosphonate metabolis 100.0 1E-30 2.2E-35 242.0 22.7 310 18-408 1-363 (383)
51 PRK13207 ureC urease subunit a 100.0 1.7E-29 3.6E-34 236.9 28.2 316 17-413 65-444 (568)
52 PRK13206 ureC urease subunit a 100.0 2.3E-29 5E-34 235.2 28.3 315 17-412 69-448 (573)
53 KOG2584 Dihydroorotase and rel 100.0 4.1E-31 8.9E-36 230.4 15.1 350 14-413 9-419 (522)
54 PRK13404 dihydropyrimidinase; 100.0 3.9E-30 8.4E-35 245.1 22.4 340 17-411 2-408 (477)
55 PRK10657 isoaspartyl dipeptida 100.0 1.7E-29 3.6E-34 237.2 26.3 320 19-406 1-360 (388)
56 PRK13985 ureB urease subunit b 100.0 4.8E-29 1E-33 230.9 28.2 332 17-414 63-445 (568)
57 PLN02795 allantoinase 100.0 1.7E-29 3.6E-34 241.5 25.5 336 18-409 43-448 (505)
58 PRK07575 dihydroorotase; Provi 100.0 4.6E-30 1E-34 242.7 20.9 325 17-411 1-384 (438)
59 PRK06189 allantoinase; Provisi 100.0 2.1E-29 4.6E-34 239.6 25.5 328 17-408 1-392 (451)
60 TIGR03178 allantoinase allanto 100.0 1.6E-29 3.5E-34 240.2 22.9 328 20-411 1-393 (443)
61 PRK07627 dihydroorotase; Provi 100.0 1.5E-29 3.2E-34 237.2 21.7 324 19-409 1-384 (425)
62 PRK09236 dihydroorotase; Revie 100.0 4.7E-29 1E-33 236.7 25.1 121 279-414 261-393 (444)
63 cd01315 L-HYD_ALN L-Hydantoina 100.0 2E-28 4.4E-33 233.9 28.9 329 20-409 1-394 (447)
64 PRK09237 dihydroorotase; Provi 100.0 6.3E-28 1.4E-32 225.3 29.8 322 21-418 1-344 (380)
65 TIGR02318 phosphono_phnM phosp 100.0 1.2E-28 2.7E-33 227.4 23.3 305 22-408 1-359 (376)
66 PRK13308 ureC urease subunit a 100.0 3.8E-28 8.1E-33 226.0 26.2 318 17-413 66-445 (569)
67 PLN02303 urease 100.0 5.8E-28 1.2E-32 231.9 27.6 328 18-411 333-711 (837)
68 PRK02382 dihydroorotase; Provi 100.0 1.2E-27 2.6E-32 227.1 29.0 327 18-410 1-382 (443)
69 PRK07369 dihydroorotase; Provi 100.0 8.6E-28 1.9E-32 224.6 26.7 328 18-410 1-387 (418)
70 cd00375 Urease_alpha Urease al 100.0 1.2E-27 2.6E-32 222.6 27.0 329 17-414 63-445 (567)
71 cd01309 Met_dep_hydrolase_C Me 100.0 6.8E-29 1.5E-33 228.8 18.3 323 47-413 1-345 (359)
72 COG0044 PyrC Dihydroorotase an 100.0 2.5E-28 5.5E-33 225.7 19.6 322 19-409 1-382 (430)
73 PRK09061 D-glutamate deacylase 100.0 1.3E-26 2.8E-31 221.9 31.1 336 17-410 17-462 (509)
74 COG1820 NagA N-acetylglucosami 100.0 1.3E-27 2.9E-32 210.8 21.1 330 21-408 2-365 (380)
75 PRK08044 allantoinase; Provisi 100.0 6.5E-27 1.4E-31 221.5 26.1 328 18-410 2-396 (449)
76 PRK09059 dihydroorotase; Valid 100.0 8.8E-27 1.9E-31 218.8 25.2 329 17-410 1-390 (429)
77 TIGR00221 nagA N-acetylglucosa 100.0 9.6E-27 2.1E-31 213.6 24.8 337 19-409 3-370 (380)
78 COG3964 Predicted amidohydrola 100.0 7.8E-27 1.7E-31 194.9 21.7 315 16-408 1-339 (386)
79 cd01305 archeal_chlorohydrolas 100.0 3.2E-27 6.9E-32 209.3 20.1 256 77-384 1-263 (263)
80 TIGR01178 ade adenine deaminas 100.0 3.7E-26 8E-31 218.9 25.7 304 20-407 1-314 (552)
81 cd00854 NagA N-acetylglucosami 100.0 1.4E-26 3E-31 214.7 22.1 329 21-408 1-364 (374)
82 PRK09060 dihydroorotase; Valid 100.0 4.9E-26 1.1E-30 215.5 25.6 326 17-410 3-385 (444)
83 PRK08417 dihydroorotase; Provi 99.9 2.1E-26 4.5E-31 214.2 21.3 299 43-413 1-358 (386)
84 cd01307 Met_dep_hydrolase_B Me 99.9 3.6E-25 7.9E-30 203.2 26.5 297 42-411 1-319 (338)
85 PRK11170 nagA N-acetylglucosam 99.9 1.4E-25 3.1E-30 206.5 23.0 336 21-408 2-366 (382)
86 cd01308 Isoaspartyl-dipeptidas 99.9 1.3E-24 2.9E-29 203.8 29.5 318 21-408 2-361 (387)
87 TIGR00857 pyrC_multi dihydroor 99.9 7.9E-26 1.7E-30 212.5 18.2 315 38-411 3-373 (411)
88 COG1001 AdeC Adenine deaminase 99.9 8.1E-25 1.8E-29 201.4 22.5 306 16-407 21-341 (584)
89 PRK01211 dihydroorotase; Provi 99.9 6.4E-25 1.4E-29 203.8 21.0 298 38-411 13-354 (409)
90 PRK10027 cryptic adenine deami 99.9 1.1E-23 2.3E-28 202.0 29.1 307 17-408 28-349 (588)
91 PF01979 Amidohydro_1: Amidohy 99.9 9.5E-26 2.1E-30 208.2 13.8 282 77-406 1-333 (333)
92 COG3454 Metal-dependent hydrol 99.9 4.8E-25 1E-29 186.3 14.0 311 21-408 1-360 (377)
93 TIGR03583 EF_0837 probable ami 99.9 3.6E-23 7.9E-28 192.2 28.0 306 19-408 1-332 (365)
94 PRK04250 dihydroorotase; Provi 99.9 2.9E-23 6.3E-28 193.0 24.2 308 24-411 2-348 (398)
95 cd01317 DHOase_IIa Dihydroorot 99.9 3.8E-23 8.2E-28 192.3 17.0 163 224-411 173-346 (374)
96 TIGR03121 one_C_dehyd_A formyl 99.9 2.7E-22 5.9E-27 187.7 20.1 117 21-148 2-121 (556)
97 cd01304 FMDH_A Formylmethanofu 99.9 8.1E-22 1.8E-26 183.6 23.2 90 321-412 370-470 (541)
98 PRK00369 pyrC dihydroorotase; 99.9 5.3E-22 1.2E-26 183.3 20.2 289 40-411 13-339 (392)
99 PF07969 Amidohydro_3: Amidohy 99.9 1.1E-21 2.4E-26 185.8 20.3 177 212-404 214-404 (404)
100 COG0804 UreC Urea amidohydrola 99.9 9.4E-23 2E-27 176.9 11.2 336 17-415 65-446 (568)
101 COG3653 N-acyl-D-aspartate/D-g 99.9 2.9E-21 6.4E-26 169.1 20.5 71 16-92 3-73 (579)
102 cd01302 Cyclic_amidohydrolases 99.9 4.2E-20 9.1E-25 169.0 22.2 264 76-410 1-308 (337)
103 cd01318 DHOase_IIb Dihydroorot 99.9 2E-20 4.3E-25 172.2 19.6 178 220-413 108-331 (361)
104 PRK06886 hypothetical protein; 99.9 2E-19 4.3E-24 161.3 25.1 272 81-388 21-328 (329)
105 cd01306 PhnM PhnM is believed 99.8 6.1E-20 1.3E-24 164.0 17.8 150 220-408 160-312 (325)
106 cd01295 AdeC Adenine deaminase 99.8 2.9E-19 6.4E-24 168.6 21.9 260 72-407 1-273 (422)
107 COG1229 FwdA Formylmethanofura 99.8 9.3E-20 2E-24 158.7 16.1 96 320-416 380-486 (575)
108 PF13147 Amidohydro_4: Amidohy 99.8 4.7E-19 1E-23 161.1 14.6 76 314-403 227-304 (304)
109 cd01292 metallo-dependent_hydr 99.8 1.9E-17 4E-22 148.4 23.3 259 82-384 1-275 (275)
110 KOG3892 N-acetyl-glucosamine-6 99.8 8.3E-18 1.8E-22 138.9 15.6 338 21-408 14-389 (407)
111 cd01320 ADA Adenosine deaminas 99.7 1.3E-15 2.8E-20 139.5 24.4 248 97-389 45-315 (325)
112 PRK09358 adenosine deaminase; 99.7 3.5E-15 7.6E-20 137.3 24.3 250 95-389 51-324 (340)
113 TIGR01430 aden_deam adenosine 99.7 5.3E-15 1.2E-19 135.1 23.6 243 100-389 47-314 (324)
114 PF13594 Amidohydro_5: Amidohy 99.6 5E-15 1.1E-19 101.3 5.9 44 43-90 1-44 (68)
115 cd01294 DHOase Dihydroorotase 99.5 2E-12 4.4E-17 118.6 20.6 161 221-398 111-308 (335)
116 cd01316 CAD_DHOase The eukaryo 99.4 7.9E-12 1.7E-16 114.0 18.8 36 366-409 259-294 (344)
117 cd00443 ADA_AMPD Adenosine/AMP 99.2 3.1E-09 6.6E-14 95.9 20.5 136 221-388 151-294 (305)
118 cd00530 PTE Phosphotriesterase 99.1 3.2E-08 6.9E-13 89.4 22.0 241 122-385 29-293 (293)
119 PRK05451 dihydroorotase; Provi 99.0 5.3E-08 1.2E-12 89.5 20.3 163 221-397 116-313 (345)
120 TIGR00856 pyrC_dimer dihydroor 99.0 1.1E-07 2.3E-12 87.1 20.8 162 221-406 113-311 (341)
121 PTZ00124 adenosine deaminase; 99.0 2.5E-07 5.5E-12 84.6 22.7 146 212-388 196-350 (362)
122 cd01321 ADGF Adenosine deamina 98.9 3.9E-07 8.4E-12 83.3 20.6 155 212-389 166-331 (345)
123 cd01310 TatD_DNAse TatD like p 98.8 3.3E-07 7.2E-12 80.9 17.6 137 222-386 107-251 (251)
124 TIGR00010 hydrolase, TatD fami 98.8 3.7E-07 8E-12 80.6 17.3 137 223-387 108-252 (252)
125 PLN02599 dihydroorotase 98.8 1.8E-06 3.8E-11 79.3 20.5 161 222-398 135-333 (364)
126 PRK09875 putative hydrolase; P 98.7 6.6E-06 1.4E-10 73.0 22.2 239 124-386 33-292 (292)
127 PF00962 A_deaminase: Adenosin 98.7 1.2E-06 2.5E-11 80.7 17.6 167 188-388 148-321 (331)
128 COG1816 Add Adenosine deaminas 98.7 3.7E-06 8E-11 75.5 19.4 139 219-388 181-326 (345)
129 PRK11449 putative deoxyribonuc 98.4 7.6E-05 1.7E-09 65.5 19.5 137 223-387 114-258 (258)
130 PRK10812 putative DNAse; Provi 98.4 4.3E-05 9.4E-10 67.3 17.4 139 223-388 111-257 (265)
131 TIGR01431 adm_rel adenosine de 98.3 7.3E-05 1.6E-09 71.2 18.4 148 219-389 302-457 (479)
132 PF02126 PTE: Phosphotriestera 98.3 3.1E-05 6.6E-10 69.4 14.6 235 123-385 36-307 (308)
133 KOG1097 Adenine deaminase/aden 98.2 0.00018 3.8E-09 65.1 18.3 142 220-388 224-372 (399)
134 PRK10425 DNase TatD; Provision 98.2 0.00014 3.1E-09 63.7 17.3 139 223-387 108-258 (258)
135 COG1735 Php Predicted metal-de 98.2 0.00078 1.7E-08 58.5 20.0 247 122-387 45-314 (316)
136 PF01026 TatD_DNase: TatD rela 98.1 0.00013 2.7E-09 64.4 15.1 216 132-386 21-255 (255)
137 COG0084 TatD Mg-dependent DNas 98.1 0.00058 1.3E-08 59.3 18.2 137 223-387 112-256 (256)
138 COG1099 Predicted metal-depend 98.1 0.00079 1.7E-08 55.4 17.4 137 223-387 114-253 (254)
139 PF00449 Urease_alpha: Urease 97.1 0.0014 3E-08 47.7 5.3 37 18-58 65-101 (121)
140 cd01311 PDC_hydrolase 2-pyrone 96.9 0.18 3.8E-06 44.7 18.4 100 221-335 108-224 (263)
141 TIGR01429 AMP_deaminase AMP de 96.9 0.033 7.2E-07 54.2 14.0 98 277-389 462-566 (611)
142 PLN03055 AMP deaminase; Provis 96.8 0.014 3.1E-07 56.4 11.5 98 277-389 440-544 (602)
143 cd01319 AMPD AMP deaminase (AM 96.8 0.015 3.3E-07 55.4 11.5 98 277-389 350-454 (496)
144 PLN02768 AMP deaminase 96.2 0.064 1.4E-06 53.5 11.7 96 278-388 674-776 (835)
145 PRK06361 hypothetical protein; 96.2 0.34 7.4E-06 41.3 14.9 96 277-387 115-210 (212)
146 PTZ00310 AMP deaminase; Provis 95.9 0.087 1.9E-06 55.9 11.7 97 277-388 1133-1236(1453)
147 PTZ00310 AMP deaminase; Provis 94.9 0.17 3.6E-06 53.9 9.8 97 278-389 504-608 (1453)
148 COG2159 Predicted metal-depend 93.5 5.1 0.00011 36.1 15.1 143 221-389 142-292 (293)
149 PF12890 DHOase: Dihydro-orota 92.6 0.038 8.3E-07 41.8 0.2 15 75-89 1-15 (142)
150 PF04909 Amidohydro_2: Amidohy 92.2 0.61 1.3E-05 41.3 7.6 161 208-387 102-273 (273)
151 PRK00912 ribonuclease P protei 90.2 3.1 6.6E-05 36.2 9.7 98 286-398 120-228 (237)
152 COG3618 Predicted metal-depend 85.6 25 0.00054 31.1 15.9 136 223-387 124-278 (279)
153 COG0418 PyrC Dihydroorotase [N 81.9 15 0.00032 32.7 9.1 110 222-336 117-253 (344)
154 COG4464 CapC Capsular polysacc 81.0 1.9 4.2E-05 35.9 3.3 19 316-334 179-197 (254)
155 COG2355 Zn-dependent dipeptida 79.6 30 0.00066 31.2 10.6 133 226-386 152-308 (313)
156 KOG3020 TatD-related DNase [Re 79.0 36 0.00078 30.5 10.8 70 224-306 136-205 (296)
157 cd01301 rDP_like renal dipepti 78.4 53 0.0011 29.9 12.7 94 224-334 155-267 (309)
158 PRK08609 hypothetical protein; 71.7 1.1E+02 0.0025 30.5 18.3 44 290-333 485-528 (570)
159 PF01244 Peptidase_M19: Membra 66.1 75 0.0016 29.1 10.2 94 278-385 207-318 (320)
160 PRK07945 hypothetical protein; 64.8 1.2E+02 0.0025 28.0 14.4 46 288-333 249-294 (335)
161 COG1831 Predicted metal-depend 60.0 1.2E+02 0.0026 26.6 11.2 136 221-388 143-283 (285)
162 PRK06015 keto-hydroxyglutarate 55.6 1.3E+02 0.0027 25.4 9.1 77 219-309 12-88 (201)
163 TIGR01182 eda Entner-Doudoroff 52.6 1.4E+02 0.0031 25.2 9.1 76 219-308 16-91 (204)
164 COG1603 RPP1 RNase P/RNase MRP 47.4 1.8E+02 0.0039 25.0 8.5 84 288-386 117-210 (229)
165 cd01733 LSm10 The eukaryotic S 45.5 65 0.0014 22.3 4.8 35 18-54 42-76 (78)
166 COG0800 Eda 2-keto-3-deoxy-6-p 45.1 1.9E+02 0.0041 24.5 8.3 76 220-309 22-97 (211)
167 TIGR01496 DHPS dihydropteroate 44.6 2E+02 0.0043 25.3 8.9 94 193-305 25-126 (257)
168 cd01721 Sm_D3 The eukaryotic S 42.6 82 0.0018 21.2 4.9 35 18-54 33-67 (70)
169 PRK12595 bifunctional 3-deoxy- 40.7 2.3E+02 0.005 26.4 9.1 119 216-334 162-298 (360)
170 TIGR03221 muco_delta muconolac 39.4 56 0.0012 23.3 3.7 44 365-409 11-59 (90)
171 PF10055 DUF2292: Uncharacteri 38.5 43 0.00092 19.5 2.5 15 42-56 19-33 (38)
172 TIGR01856 hisJ_fam histidinol 37.3 2.8E+02 0.0062 24.2 14.2 43 290-332 191-238 (253)
173 TIGR01362 KDO8P_synth 3-deoxy- 36.4 2E+02 0.0043 25.3 7.3 118 216-333 52-185 (258)
174 COG1387 HIS2 Histidinol phosph 36.1 2.9E+02 0.0063 24.0 12.9 47 288-334 151-197 (237)
175 PRK07114 keto-hydroxyglutarate 36.1 2.8E+02 0.0061 23.8 9.6 80 219-308 23-102 (222)
176 KOG4549 Magnesium-dependent ph 35.5 95 0.0021 23.8 4.6 77 69-163 8-85 (144)
177 cd01724 Sm_D1 The eukaryotic S 33.5 1.4E+02 0.0029 21.4 5.0 36 18-55 34-69 (90)
178 PRK13397 3-deoxy-7-phosphohept 32.8 3.4E+02 0.0074 23.8 8.8 115 220-334 63-195 (250)
179 cd01725 LSm2 The eukaryotic Sm 32.6 1.2E+02 0.0026 21.1 4.6 39 18-56 34-72 (81)
180 PF01081 Aldolase: KDPG and KH 32.1 1.6E+02 0.0034 24.7 6.0 90 220-328 17-106 (196)
181 PRK06552 keto-hydroxyglutarate 31.8 3.2E+02 0.007 23.2 10.1 75 220-308 22-99 (213)
182 COG5016 Pyruvate/oxaloacetate 30.8 4.7E+02 0.01 24.8 10.0 103 129-248 102-211 (472)
183 PF02811 PHP: PHP domain; Int 30.5 71 0.0015 25.7 3.8 39 132-170 23-64 (175)
184 PRK05198 2-dehydro-3-deoxyphos 29.8 3E+02 0.0065 24.3 7.4 117 216-332 60-192 (264)
185 cd01723 LSm4 The eukaryotic Sm 29.6 1.4E+02 0.0031 20.4 4.5 37 18-55 34-70 (76)
186 PF11068 YlqD: YlqD protein; 28.0 63 0.0014 25.0 2.7 14 40-53 117-130 (131)
187 cd01731 archaeal_Sm1 The archa 26.8 2E+02 0.0043 19.1 4.9 36 18-55 33-68 (68)
188 PRK09140 2-dehydro-3-deoxy-6-p 26.0 4E+02 0.0088 22.5 9.3 76 219-308 18-94 (206)
189 smart00651 Sm snRNP Sm protein 21.8 2.2E+02 0.0047 18.6 4.2 36 18-54 31-66 (67)
190 PF13128 DUF3954: Protein of u 21.8 2.1E+02 0.0047 17.8 4.8 12 44-55 14-25 (50)
191 PRK08392 hypothetical protein; 21.6 2.7E+02 0.006 23.5 5.9 42 290-333 143-184 (215)
192 PRK05718 keto-hydroxyglutarate 20.9 5.3E+02 0.011 22.0 8.9 76 219-308 23-98 (212)
193 KOG0202 Ca2+ transporting ATPa 20.8 7.1E+02 0.015 26.3 8.9 38 212-249 576-613 (972)
194 PRK14042 pyruvate carboxylase 20.2 9.1E+02 0.02 24.5 10.7 104 130-248 101-209 (596)
195 cd01726 LSm6 The eukaryotic Sm 20.2 2.7E+02 0.0059 18.4 4.7 34 18-53 33-66 (67)
No 1
>PRK15493 5-methylthioadenosine/S-adenosylhomocysteine deaminase; Provisional
Probab=100.00 E-value=1.2e-51 Score=389.46 Aligned_cols=380 Identities=31% Similarity=0.466 Sum_probs=316.5
Q ss_pred ceEEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhcccC
Q 014702 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (420)
Q Consensus 19 ~~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~~ 98 (420)
++++|+|++|+++|+...++++++|+|+||+|++||+...... ..++++||++|++|||||||+|+|+.++.++|..
T Consensus 1 ~~~li~~~~v~t~~~~~~~~~~g~V~i~~g~I~~vg~~~~~~~---~~~~~viD~~g~~i~PGlVn~H~H~~~~~~rg~~ 77 (435)
T PRK15493 1 MKTTYVNATIVTMNEQNEVIENGYIIVENDQIIDVNSGEFASD---FEVDEVIDMKGKWVLPGLVNTHTHVVMSLLRGIG 77 (435)
T ss_pred CeEEEEccEEEEeCCCCcEecCcEEEEECCEEEEEcCcccccc---CCCCeEEeCCCCEEccceeecccCccchhhhccC
Confidence 3689999999999877778899999999999999998532211 1357899999999999999999999999999998
Q ss_pred CCCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCc---cCHHHHHHHHHHhCCeeEeeehhccCCC
Q 014702 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG---QHVSEMAKAVELLGLRACLVQSTMDCGE 175 (420)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 175 (420)
.+.++.+|+...+|+.+..+.+++.+..+.....+++++|+||+.|+.. .......++..+.|+|..++...++.+.
T Consensus 78 ~~~~l~~wl~~~~~~~~~~~~~e~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~a~~~~GiR~~~~~~~~~~~~ 157 (435)
T PRK15493 78 DDMLLQPWLETRIWPLESQFTPELAVASTELGLLEMVKSGTTSFSDMFNPIGVDQDAIMETVSRSGMRAAVSRTLFSFGT 157 (435)
T ss_pred CCCCHHHHHHhchhhchhcCCHHHHHHHHHHHHHHHHhCCccEEEccccccccCHHHHHHHHHHcCCcEEEeeeecCCCC
Confidence 8889999999888998888888888888889999999999999999753 2346677888899999988876654321
Q ss_pred CCCcccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHh
Q 014702 176 GLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMD 255 (420)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~ 255 (420)
. .......++...+++++... .+.+...++++..+.++++.++++.++++++|+++++|+.++..+.+....
T Consensus 158 ~-------~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~t~s~e~l~~~~~~A~~~g~~v~~H~~e~~~e~~~~~~ 229 (435)
T PRK15493 158 K-------EDEKKAIEEAEKYVKRYYNE-SGMLTTMVAPHSPYTCSTELLEECARIAVENQTMVHIHLSETEREVRDIEA 229 (435)
T ss_pred C-------ccHHHHHHHHHHHHHHhcCC-CCCeEEEEeCCCCCcCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHH
Confidence 1 12233445556666665432 367888899999999999999999999999999999999998776666655
Q ss_pred hcCCCCChHHHHHHhccCCCccceeeccCCChhhHHHHHhcCCeEEECccchhhc-cCcccHHHHHHcCCcEEEccCCCC
Q 014702 256 TRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAP 334 (420)
Q Consensus 256 ~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~gv~~~lgsD~~~ 334 (420)
..+ ..+.+.+...++++.+.++.|+.++++++++++++.|+.+++||.++..+ .+..|++++.+.|+++++|||+..
T Consensus 230 ~~g--~~~~~~l~~~Gll~~~~~~~H~~~l~~~d~~~la~~g~~v~~~P~sn~~l~~g~~p~~~~~~~Gv~v~lGtD~~~ 307 (435)
T PRK15493 230 QYG--KRPVEYAASCGLFKRPTVIAHGVVLNDNERAFLAEHDVRVAHNPNSNLKLGSGIANVKAMLEAGIKVGIATDSVA 307 (435)
T ss_pred HhC--CCHHHHHHHcCCCCCCcEEEEeecCCHHHHHHHHHcCCeEEEChHHHHHHhcCcccHHHHHHCCCeEEEccCccc
Confidence 443 45788899999999999999999999999999999999999999999766 778999999999999999999976
Q ss_pred CCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEcCC-CCCCC
Q 014702 335 SNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPF-SWPMV 413 (420)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~-~~~~~ 413 (420)
++++.+++.+++.+.+.+++.. ..+..++++++++++|.++|+++|+++ +|+|++|+.||||++|.+ .+...
T Consensus 308 ~~~~~d~~~~~~~a~~~~~~~~------~~~~~~~~~~~l~~aT~~gA~~lg~~~-~G~l~~G~~ADlvv~d~~~~~~~~ 380 (435)
T PRK15493 308 SNNNLDMFEEMRIATLLQKGIH------QDATALPVETALTLATKGAAEVIGMKQ-TGSLEVGKCADFITIDPSNKPHLQ 380 (435)
T ss_pred cCCCcCHHHHHHHHHHHHhhcc------CCCCcCCHHHHHHHHhHHHHHHcCCCC-CCccCCCCcCCEEEEcCCCCCCcC
Confidence 6677899999998877765321 112469999999999999999999964 899999999999999974 56666
Q ss_pred CCCCC
Q 014702 414 PVHDR 418 (420)
Q Consensus 414 ~~~~~ 418 (420)
|..|+
T Consensus 381 p~~d~ 385 (435)
T PRK15493 381 PADEV 385 (435)
T ss_pred CccCh
Confidence 66554
No 2
>PRK06687 chlorohydrolase; Validated
Probab=100.00 E-value=1.4e-51 Score=389.29 Aligned_cols=379 Identities=29% Similarity=0.478 Sum_probs=315.0
Q ss_pred EEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhcccCCC
Q 014702 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (420)
Q Consensus 21 ~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~~~~ 100 (420)
++|+|+.|+|+|+...++++++|+|+||+|++|++..+... ....++||++|++|+|||||+|+|+.++.++|...+
T Consensus 2 ~~~~n~~vvt~d~~~~~~~~g~VlV~~g~I~aVg~~~~~~~---~~~~~viD~~g~~v~PGlIn~H~H~~~~~~rg~~~~ 78 (419)
T PRK06687 2 KVFQHVNIVTCDQDFHVYLDGILAVKDSQIVYVGQDKPAFL---EQAEQIIDYQGAWIMPGLVNCHTHSAMTGLRGIRDD 78 (419)
T ss_pred cceEeeEEEEeCCCceEecCcEEEEECCEEEEecCcccccc---cccCeEEeCCCCEEccceeeeccCCCccccccccCC
Confidence 57999999999987788899999999999999998644211 125689999999999999999999999999998877
Q ss_pred CChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCc---cCHHHHHHHHHHhCCeeEeeehhccCCCCC
Q 014702 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG---QHVSEMAKAVELLGLRACLVQSTMDCGEGL 177 (420)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 177 (420)
.++.+|+....|+.+..+.+++.+........+++++||||+.++.. .......++..+.|++..++..++....
T Consensus 79 ~~~~~wl~~~~~~~~~~~~~~~~~~~~~~a~~e~l~~GvTTv~d~~~~~~~~~~~~~~a~~~~Gir~~~~~~~~~~~~-- 156 (419)
T PRK06687 79 SNLHEWLNDYIWPAESEFTPDMTTNAVKEALTEMLQSGTTTFNDMYNPNGVDIQQIYQVVKTSKMRCYFSPTLFSSET-- 156 (419)
T ss_pred CCHHHHHHhhhccccccCCHHHHHHHHHHHHHHHHhcCcceeehhhccccccHHHHHHHHHHhCCceEeccccccCCc--
Confidence 88999999998988777777777777778889999999999999753 2356677888899999877655443211
Q ss_pred CcccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhc
Q 014702 178 PASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTR 257 (420)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~ 257 (420)
.......++..++++++...+...++.++.++..+.++++.++++.++|+++++++++|+.+...+.....+..
T Consensus 157 ------~~~~~~~~~~~~~i~~~~~~~~~~i~~~~~~~~~~~~s~e~l~~~~~~A~~~g~~i~~H~~e~~~e~~~~~~~~ 230 (419)
T PRK06687 157 ------ETTAETISRTRSIIDEILKYKNPNFKVMVAPHSPYSCSRDLLEASLEMAKELNIPLHVHVAETKEESGIILKRY 230 (419)
T ss_pred ------ccHHHHHHHHHHHHHHHhccCCCceEEEEeCCCCCCCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHH
Confidence 12344556667777776655556788889999999999999999999999999999999999886665555544
Q ss_pred CCCCChHHHHHHhccCCCccceeeccCCChhhHHHHHhcCCeEEECccchhhc-cCcccHHHHHHcCCcEEEccCCCCCC
Q 014702 258 KVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSN 336 (420)
Q Consensus 258 ~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~gv~~~lgsD~~~~~ 336 (420)
+ ..+.+.++..+.++.+.++.|+.++++++++++++.|+.+.+||.++... .+.+|++++++.|+++++|||+..++
T Consensus 231 g--~~~~~~l~~~g~l~~~~~~~H~~~~~~~~~~~la~~g~~v~~~P~sn~~l~~g~~p~~~~~~~Gv~v~lGtD~~~~~ 308 (419)
T PRK06687 231 G--KRPLAFLEELGYLDHPSVFAHGVELNEREIERLASSQVAIAHNPISNLKLASGIAPIIQLQKAGVAVGIATDSVASN 308 (419)
T ss_pred C--cCHHHHHHHcCCCCCCeEEEEEecCCHHHHHHHHHcCCeEEECcHHhhhhccCCCcHHHHHHCCCeEEEeCCCCCCC
Confidence 4 44778899999999999999999999999999999999999999998766 67899999999999999999987666
Q ss_pred CCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEcCC-CCCCCCC
Q 014702 337 NRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPF-SWPMVPV 415 (420)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~-~~~~~~~ 415 (420)
++.+++++++.+....+.... ....++.+++++++|.++|+++|+++++|+|++|+.|||+++|.+ .+...|.
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~aT~~gA~~lg~~~~~G~l~~G~~ADlv~~d~~~~~~~~p~ 382 (419)
T PRK06687 309 NNLDMFEEGRTAALLQKMKSG------DASQFPIETALKVLTIEGAKALGMENQIGSLEVGKQADFLVIQPQGKIHLQPQ 382 (419)
T ss_pred CChhHHHHHHHHHHHhccccC------CCccCCHHHHHHHHhHHHHHHcCCCCCCcccCCCccCCEEEECCCCCCCcCCc
Confidence 678899999988766553211 123589999999999999999999888999999999999999987 4666776
Q ss_pred CCC
Q 014702 416 HDR 418 (420)
Q Consensus 416 ~~~ 418 (420)
+||
T Consensus 383 ~~~ 385 (419)
T PRK06687 383 ENM 385 (419)
T ss_pred cCH
Confidence 665
No 3
>PRK07228 N-ethylammeline chlorohydrolase; Provisional
Probab=100.00 E-value=1.9e-49 Score=377.98 Aligned_cols=383 Identities=38% Similarity=0.631 Sum_probs=310.9
Q ss_pred ceEEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhcccC
Q 014702 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (420)
Q Consensus 19 ~~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~~ 98 (420)
++++|+|++|+++++. ..+++++|+|+||+|++|++....+ ...++||++|++|||||||+|+|+.+...++..
T Consensus 1 ~~~~i~~~~vi~~~~~-~~~~~g~V~I~dg~I~~vg~~~~~~-----~~~~vID~~G~~vlPGlId~H~H~~~~~~~g~~ 74 (445)
T PRK07228 1 MTILIKNAGIVTMNAK-REIVDGDVLIEDDRIAAVGDRLDLE-----DYDDHIDATGKVVIPGLIQGHIHLCQTLFRGIA 74 (445)
T ss_pred CeEEEEccEEEecCCC-cEecccEEEEECCEEEEecCCcccC-----cCCeEEeCCCCEEecCEEecccCCccccceecc
Confidence 4689999999997763 4579999999999999999854321 267899999999999999999999988877777
Q ss_pred CCCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCcc-CHHHHHHHHHHhCCeeEeeehhccCCCCC
Q 014702 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-HVSEMAKAVELLGLRACLVQSTMDCGEGL 177 (420)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 177 (420)
.+.++.+|+....|+....+.+++.+..+.....+++.+|+||+++++.. ......++....|++...+...++.+...
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~e~L~~GvTtv~d~~~~~~~~~~~~a~~~~g~r~~~~~~~~~~~~~~ 154 (445)
T PRK07228 75 DDLELLDWLKDRIWPLEAAHDAESMYYSALLGIGELIESGTTTIVDMESVHHTDSAFEAAGESGIRAVLGKVMMDYGDDV 154 (445)
T ss_pred CCCCHHHHHHhhhhhhhhhCCHHHHHHHHHHHHHHHHhcCceEEEccccccChHHHHHHHHHcCCeEEEecceecCCcCC
Confidence 77889999988888888888888888888889999999999999998753 34666788889999988877776643211
Q ss_pred CcccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhc
Q 014702 178 PASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTR 257 (420)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~ 257 (420)
+.. ........+++..++++.+.....+.+...+.++.....+++.+++++++++++|+++++|+.++....+...+..
T Consensus 155 p~~-~~~~~~~~l~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~e~~~~~~~~~~~~ 233 (445)
T PRK07228 155 PEG-LQEDTEASLAESVRLLEKWHGADNGRIRYAFTPRFAVSCTEELLRGVRDLADEYGVRIHTHASENRGEIETVEEET 233 (445)
T ss_pred Ccc-ccccHHHHHHHHHHHHHHhcCCCCCceEEEEeCCCCCCCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHh
Confidence 211 1223445566667777766544445565556666667788999999999999999999999998876665555444
Q ss_pred CCCCChHHHHHHhccCCCccceeeccCCChhhHHHHHhcCCeEEECccchhhc-cCcccHHHHHHcCCcEEEccCCCCCC
Q 014702 258 KVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSN 336 (420)
Q Consensus 258 ~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~gv~~~lgsD~~~~~ 336 (420)
+ ...++.+...++++.+.++.|+.++++++++++++.|+.+++||.+++.. .+..|++++++.|+++++|||+++.+
T Consensus 234 g--~~~~~~l~~~g~~~~~~~l~H~~~~~~~~~~~~~~~g~~v~~~P~~~~~~~~~~~p~~~~~~~Gv~v~lGtD~~~~~ 311 (445)
T PRK07228 234 G--MRNIHYLDEVGLTGEDLILAHCVWLDEEEREILAETGTHVTHCPSSNLKLASGIAPVPDLLERGINVALGADGAPCN 311 (445)
T ss_pred C--CCHHHHHHHCCCCCCCcEEEEEecCCHHHHHHHHHcCCeEEEChHHhhhcccccCcHHHHHHCCCeEEEcCCCCccC
Confidence 3 34678888899999999999999999999999999999999999988765 56889999999999999999998765
Q ss_pred CCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEcCCCCCCCCCC
Q 014702 337 NRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVH 416 (420)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~ 416 (420)
...++|.+++.+.++.+.... ....+|++++++++|.|||+++|+++++|+|++|+.|||+|+|.+++...|.+
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~------~~~~~s~~~al~~~T~~~A~~lg~~~~~G~l~~G~~ADlvvld~~~~~~~p~~ 385 (445)
T PRK07228 312 NTLDPFTEMRQAALIQKVDRL------GPTAMPARTVFEMATLGGAKAAGFEDEIGSLEEGKKADLAILDLDGLHATPSH 385 (445)
T ss_pred CCccHHHHHHHHHHHhhhccC------CCcccCHHHHHHHHHHHHHHHhCCCCCccccCCCCccCEEEEcCCCcccCCCc
Confidence 667899998887665543211 12359999999999999999999988889999999999999999988777765
No 4
>PRK09045 N-ethylammeline chlorohydrolase; Provisional
Probab=100.00 E-value=4.7e-49 Score=374.13 Aligned_cols=386 Identities=33% Similarity=0.545 Sum_probs=308.3
Q ss_pred CCCCceEEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhh
Q 014702 15 LGSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLA 94 (420)
Q Consensus 15 ~~~~~~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~ 94 (420)
++++.+++|+|+.|+++++...++++++|+|+||+|++|++....+..+ .+.++||++|++|||||||+|+|+.++.+
T Consensus 3 ~~~~~~~li~~~~v~~~~~~~~~~~~~~v~i~~g~I~~Vg~~~~~~~~~--~~~~~iD~~g~~v~PG~id~H~Hl~~~~~ 80 (443)
T PRK09045 3 PMEPVDLLIEARWIVPVEPAGVVLEDHAVAIRDGRIVAILPRAEARARY--AAAETVELPDHVLIPGLINAHTHAAMSLL 80 (443)
T ss_pred CcccccEEEEccEEEEeCCCceEeeccEEEEECCEEEEecCcccccccC--CcceEEeCCCCEEecCEeccccChhhHhh
Confidence 4456799999999999886678889999999999999999865432211 25689999999999999999999999888
Q ss_pred cccCCCCChHHHhhhccccccC-CCChHHHHHHHHHHHHHHHhCCcceeeeCCccCHHHHHHHHHHhCCeeEeeehhccC
Q 014702 95 KGIADDVDLMTWLHDRIWPYES-NMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDC 173 (420)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 173 (420)
++...+.++.+|+....|+.+. .+++++.+........+++++|+||+.++. .......+...+.|+|.+.+...++.
T Consensus 81 ~g~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~G~Ttv~d~~-~~~~~~~~~~~~~G~R~~~~~~~~~~ 159 (443)
T PRK09045 81 RGLADDLPLMTWLQDHIWPAEGAWVSEEFVRDGTLLAIAEMLRGGTTCFNDMY-FFPEAAAEAAHQAGMRAQIGMPVLDF 159 (443)
T ss_pred hhccCCCCHHHHHHhhhhhhhhccCCHHHHHHHHHHHHHHHHhcCCcEEEecc-ccHHHHHHHHHHcCCeEEEecccccC
Confidence 8877778889999877776443 356667777888889999999999999975 34455577788899999877665542
Q ss_pred CCCCCcccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHcCCccceeccCCcchhHHH
Q 014702 174 GEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVV 253 (420)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~ 253 (420)
+..+ .......++...++.+.+. +.+.+++.+.++..+..+++.+++++++++++|+++++|+.+.....+..
T Consensus 160 ----~~~~-~~~~~~~l~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~ 232 (443)
T PRK09045 160 ----PTAW-ASDADEYLAKGLELHDQWR--HHPLISTAFAPHAPYTVSDENLERIRTLAEQLDLPIHIHLHETAQEIADS 232 (443)
T ss_pred ----CCcc-ccCHHHHHHHHHHHHHHhc--CCCcEEEEEeCCCCCCCCHHHHHHHHHHHHHcCCCEEEeecCcHHHHHHH
Confidence 1111 1233444555555555654 34678888888888889999999999999999999999998876554444
Q ss_pred HhhcCCCCChHHHHHHhccCCCccceeeccCCChhhHHHHHhcCCeEEECccchhhc-cCcccHHHHHHcCCcEEEccCC
Q 014702 254 MDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDG 332 (420)
Q Consensus 254 ~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~gv~~~lgsD~ 332 (420)
.+.. +..+++.+...+.++.+.++.|+.++++++++++++.|+.+++||.++.+. .+..|++++.+.|+++++|||+
T Consensus 233 ~~~~--g~~~~~~l~~~g~l~~r~~~~H~~~l~~~~~~~la~~g~~i~~~P~~~~~~~~~~~~~~~l~~~Gv~v~lGtD~ 310 (443)
T PRK09045 233 LKQH--GQRPLARLARLGLLGPRLIAVHMTQLTDAEIALLAETGCSVVHCPESNLKLASGFCPVAKLLQAGVNVALGTDG 310 (443)
T ss_pred HHHh--CCCHHHHHHHcCCCCCCeEEEEecCCCHHHHHHHHHcCCeEEECHHHHhhhccCCCcHHHHHHCCCeEEEecCC
Confidence 4333 345778888899999999999999999999999999999999999987654 5678999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEcCCCCCC
Q 014702 333 APSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPM 412 (420)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~ 412 (420)
+++....+++.+++.+....+... ....+++++++++++|.|||+++|+++++|+|++|+.|||||||.++++.
T Consensus 311 ~~~~~~~~~~~~~~~a~~~~~~~~------~~~~~~~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~ 384 (443)
T PRK09045 311 AASNNDLDLFGEMRTAALLAKAVA------GDATALPAHTALRMATLNGARALGLDDEIGSLEPGKQADLVAVDLSGLET 384 (443)
T ss_pred CCCCCCccHHHHHHHHHHHHhhcc------CCCCcCCHHHHHHHHhHHHHHHcCCCCCCcccCCCCcCCEEEEeCCCCCc
Confidence 876566788998888765543211 11346999999999999999999998889999999999999999998876
Q ss_pred CCCCCC
Q 014702 413 VPVHDR 418 (420)
Q Consensus 413 ~~~~~~ 418 (420)
.|..++
T Consensus 385 ~p~~~~ 390 (443)
T PRK09045 385 QPVYDP 390 (443)
T ss_pred CCccCh
Confidence 665443
No 5
>TIGR03314 Se_ssnA putative selenium metabolism protein SsnA. Members of this protein family are found exclusively in genomes that contain putative set of labile selenium-dependent enzyme accessory proteins as well as homologs of a labile selenium-dependent purine hydroxylase. A mutant in this gene in Escherichia coli had improved stationary phase viability. The function is unknown.
Probab=100.00 E-value=1e-48 Score=370.13 Aligned_cols=375 Identities=25% Similarity=0.412 Sum_probs=307.6
Q ss_pred EEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhcccCCC
Q 014702 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (420)
Q Consensus 21 ~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~~~~ 100 (420)
++|+|++|++++++..++++++|+|++|+|++|++..+....+ ...++||++|++|+|||||+|+|+.+...++...+
T Consensus 1 ~li~~~~i~t~~~~~~~~~~~~v~i~~g~I~~vg~~~~~~~~~--~~~~~id~~g~~v~PG~vd~H~H~~~~~~rg~~~d 78 (441)
T TIGR03314 1 LLIGNGTAVQLDPTRPIQEGGDIAIDGDVIKAVGPTEELKQKY--PEATFIDAKGKLIMPGFINTHNHFYSTFARGMMAD 78 (441)
T ss_pred CEEECCEEEecCCCCceEeccEEEEECCEEEEEcCchhhcccC--CCCeEEeCCCCEEecCeeecccchhhhhhcccccc
Confidence 4799999999876555788999999999999999864432111 24688999999999999999999999888886544
Q ss_pred ----CChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCcc------CHHHHHHHHHHhCCeeEeeehh
Q 014702 101 ----VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ------HVSEMAKAVELLGLRACLVQST 170 (420)
Q Consensus 101 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~------~~~~~~~~~~~~g~~~~~~~~~ 170 (420)
.++.+|+...+|+.+..+++++.+........+++++|+||++++... ..+...++..+.|+|..+++.+
T Consensus 79 ~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~a~~~~~e~l~~GtTt~~d~~~~~~~~~~~~~~~~~a~~~~GiR~~~~~~~ 158 (441)
T TIGR03314 79 IPPPPDFISILKNLWWRLDRALTLEDVYYSGLICSLDAIKSGCTTVIDHHASPNAITGSLSTIRKAADEAGLRTMLCYET 158 (441)
T ss_pred CCCCCCHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHHHcCCeEEEecccccccccchHHHHHHHHHHhCCeEEEeeee
Confidence 368899999899988889999989988888999999999999997421 1356788899999999888777
Q ss_pred ccCCCCCCcccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHcCCccceeccCCcchh
Q 014702 171 MDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYEN 250 (420)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~ 250 (420)
++...+ ......+....++++++.....+.+...++++..+.++++.++.+.++|+++++++++|+.++..+.
T Consensus 159 ~~~~~~-------~~~~~~l~~~~~~~~~~~~~~~~~i~~~~~p~~~~t~s~~~l~~~~~lA~~~~~~i~~H~~E~~~e~ 231 (441)
T TIGR03314 159 SDRDGG-------KEMQEGVEENIAFIKKSSGKEPYLVEAHIGAHAPFTVSDAGLEMCREAVQATGRGFHIHVAEDIYDV 231 (441)
T ss_pred ecCCCc-------ccHHHHHHHHHHHHHHhccCCCCceEEEEecCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCHHHH
Confidence 653211 1223334455566666665555678888999999999999999999999999999999999998887
Q ss_pred HHHHhhcCCCCChHHHHHHhccCCCccceeeccCCChhhHHHHHhcCCeEEECccchhhc-cCcccHHHHHHcCCcEEEc
Q 014702 251 QVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLG 329 (420)
Q Consensus 251 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~gv~~~lg 329 (420)
+...+.++ ..+++.++..++++.+.++.||.++++++++++++.|+.+++||.+++++ .+.+|+.++++.|++++||
T Consensus 232 ~~~~~~~g--~~~~~~l~~~G~l~~~~~~~H~~~~~~~d~~~la~~g~~v~~cP~sn~~l~~G~~p~~~~~~~Gv~v~LG 309 (441)
T TIGR03314 232 EDSHHKYG--KDIVERLADFGLLGSKTLAAHCIYLSDREIELLNETDTFVVHNPESNMGNAVGYNPVLRMFKNGILLGLG 309 (441)
T ss_pred HHHHHHcC--CCHHHHHHHCCCCCCCeEEEEEecCCHHHHHHHHHcCCcEEECHHHHhhhccCCCCHHHHHHCCCEEEEc
Confidence 77776555 46889999999999999999999999999999999999999999999877 6799999999999999999
Q ss_pred cCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcc--CCCcccccccCccccEEEEcC
Q 014702 330 TDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVL--WDNDIGSLEAGKKADMVVVDP 407 (420)
Q Consensus 330 sD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lg--l~~~~G~l~~G~~ADlvv~d~ 407 (420)
||+.. .+++++|+.+.+.++.... .....+.++++++|.++|+++| +.+++|+|++|+.|||+|+|.
T Consensus 310 tD~~~----~d~~~em~~a~~~~~~~~~-------~~~~~~~~~~~~aT~~ga~al~~~l~~~~G~Le~G~~ADlvv~d~ 378 (441)
T TIGR03314 310 TDGYT----SDMFESLKFANFKHKDAGG-------DLNAAWPESPAMLFENNNEIAERNFGAKFGRLEPGAKADLIIVDY 378 (441)
T ss_pred CCCCC----cCHHHHHHHHHHHhccccC-------CCCccHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcccEEEEcC
Confidence 99853 4899999999887663311 1123467899999999999996 455689999999999999998
Q ss_pred CCCCCCCCCC
Q 014702 408 FSWPMVPVHD 417 (420)
Q Consensus 408 ~~~~~~~~~~ 417 (420)
+..+..|..+
T Consensus 379 ~~~~~~~~~~ 388 (441)
T TIGR03314 379 NAPTPLTADN 388 (441)
T ss_pred CCCeeechhh
Confidence 8665555433
No 6
>PRK07203 putative chlorohydrolase/aminohydrolase; Validated
Probab=100.00 E-value=2.9e-48 Score=368.67 Aligned_cols=376 Identities=26% Similarity=0.420 Sum_probs=306.1
Q ss_pred EEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhcccCC-
Q 014702 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD- 99 (420)
Q Consensus 21 ~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~~~- 99 (420)
++|+|++|+++++...+.++++|+|+||+|++|++..+....+ ...++||++|++|+|||||+|+|+.++..++...
T Consensus 2 ~li~~~~i~~~~~~~~~~~~~~v~I~~g~I~~Vg~~~~~~~~~--~~~~viD~~g~lv~PGfID~H~H~~~~~~rg~~~~ 79 (442)
T PRK07203 2 LLIGNGTAITRDPAKPVIEDGAIAIEGNVIVEIGTTDELKAKY--PDAEFIDAKGKLIMPGLINSHNHIYSGLARGMMAN 79 (442)
T ss_pred EEEECCEEEeCCCCCceeeccEEEEECCEEEEEeCchhhcccc--CCCeEEeCCCCEEecceeeccccchhhhhcccccc
Confidence 5799999998776555678899999999999999753322111 2568999999999999999999999888887642
Q ss_pred ---CCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCcc------CHHHHHHHHHHhCCeeEeeehh
Q 014702 100 ---DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ------HVSEMAKAVELLGLRACLVQST 170 (420)
Q Consensus 100 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~------~~~~~~~~~~~~g~~~~~~~~~ 170 (420)
..++.+|+....|+.+..+++++.+........+++++|+||++++... .....+++..+.|+|..++...
T Consensus 80 ~~~~~~l~~~l~~~~~~~~~~~t~e~~~~~a~~~~~e~l~~GtTt~~d~~~~~~~~~~~~~~~~~a~~~~GiR~~~~~~~ 159 (442)
T PRK07203 80 IPPPPDFISILKNLWWRLDRALTLEDVYYSALICSLEAIKNGVTTVFDHHASPNYIGGSLFTIADAAKKVGLRAMLCYET 159 (442)
T ss_pred cCCCCCHHHHHHhheehhhhcCCHHHHHHHHHHHHHHHHHcCceEEEccccccccccchHHHHHHHHHHhCCeEEEeccc
Confidence 2478899998889988889999999888889999999999999987421 1245678888999999887665
Q ss_pred ccCCCCCCcccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHcCCccceeccCCcchh
Q 014702 171 MDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYEN 250 (420)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~ 250 (420)
.+.. + ........++..++++.+.....+.+...++++..+.++++.++++.++|+++++++++|+.++..+.
T Consensus 160 ~d~~-~------~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~p~~~~~~s~~~l~~~~~lA~~~g~~i~~H~~E~~~e~ 232 (442)
T PRK07203 160 SDRD-G------EKELQEGVEENIRFIKHIDEAKDDMVEAMFGLHASFTLSDATLEKCREAVKETGRGYHIHVAEGIYDV 232 (442)
T ss_pred ccCC-c------chhHHHHHHHHHHHHHHhcCCCCCceEEEEccCCCcCcCHHHHHHHHHHHHHcCCcEEEEecCChHHH
Confidence 5432 1 11223445566666777665555678888999999999999999999999999999999999998887
Q ss_pred HHHHhhcCCCCChHHHHHHhccCCCccceeeccCCChhhHHHHHhcCCeEEECccchhhc-cCcccHHHHHHcCCcEEEc
Q 014702 251 QVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLG 329 (420)
Q Consensus 251 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~gv~~~lg 329 (420)
+...+.++ ..+++.++..++++.+.++.||.++++++++++++.|+.+++||.+++.. .+..|+.+++++|+++++|
T Consensus 233 ~~~~~~~g--~~~v~~l~~~Gll~~~~~~~H~~~~~~~d~~~la~~g~~v~~~P~sn~~l~~g~~p~~~~~~~Gv~v~lG 310 (442)
T PRK07203 233 SDSHKKYG--KDIVERLADFGLLGEKTLAAHCIYLSDEEIDLLKETDTFVVHNPESNMGNAVGYNPVLEMIKNGILLGLG 310 (442)
T ss_pred HHHHHHcC--CCHHHHHHhCCCCCCCcEEEEeecCCHHHHHHHHhcCCeEEECchhhhhcccCCCCHHHHHHCCCeEEEc
Confidence 77776554 46889999999999999999999999999999999999999999999877 6789999999999999999
Q ss_pred cCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcc--CCCcccccccCccccEEEEcC
Q 014702 330 TDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVL--WDNDIGSLEAGKKADMVVVDP 407 (420)
Q Consensus 330 sD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lg--l~~~~G~l~~G~~ADlvv~d~ 407 (420)
||+.. .+++++++.+.+.++.... ....+++++++++|.++|+++| +.++.|+|++||.||||++|.
T Consensus 311 tD~~~----~d~~~~~~~a~~~~~~~~~-------~~~~~~~~~~~~aT~~gA~~lg~~~~~~~G~l~~G~~ADlvv~d~ 379 (442)
T PRK07203 311 TDGYT----SDMFESYKVANFKHKHAGG-------DPNVGWPESPAMLFENNNKIAERYFGAKFGILEEGAKADLIIVDY 379 (442)
T ss_pred CCCCC----ccHHHHHHHHHHHhccccC-------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCccCEEEEcC
Confidence 99743 4899999988777653211 1124678999999999999999 456789999999999999998
Q ss_pred CCCCCCCCCCC
Q 014702 408 FSWPMVPVHDR 418 (420)
Q Consensus 408 ~~~~~~~~~~~ 418 (420)
+.....+..+|
T Consensus 380 ~~~~~~~~~~~ 390 (442)
T PRK07203 380 NPPTPLNEDNI 390 (442)
T ss_pred CCCeecCcccc
Confidence 86555544443
No 7
>cd01303 GDEase Guanine deaminase (GDEase). Guanine deaminase is an aminohydrolase responsible for the conversion of guanine to xanthine and ammonia, the first step to utilize guanine as a nitrogen source. This reaction also removes the guanine base from the pool and therefore can play a role in the regulation of cellular GTP and the guanylate nucleotide pool.
Probab=100.00 E-value=5.6e-48 Score=364.24 Aligned_cols=374 Identities=25% Similarity=0.351 Sum_probs=300.1
Q ss_pred EEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhcccCCCCChHHHh
Q 014702 28 IVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWL 107 (420)
Q Consensus 28 v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~~~~~~~~~~~ 107 (420)
+.|+|....++++++|+|+||+|++||+..+.....+ ..+++||++|++|||||||+|+|+.++.+++...+.++.+|+
T Consensus 14 ~~~~d~~~~~~~~g~V~v~~g~I~~vG~~~~~~~~~~-~~~~viD~~g~~v~PGlVn~H~Hl~~~~~rg~~~~~~l~~wl 92 (429)
T cd01303 14 LELVEDALRVVEDGLIVVVDGNIIAAGAAETLKRAAK-PGARVIDSPNQFILPGFIDTHIHAPQYANIGSGLGEPLLDWL 92 (429)
T ss_pred ccccCCcEEEECCeEEEEECCEEEEeCchhhhhhhcC-CCceEEcCCCCEEecceeeeeecccccccccccCCCcHHHHH
Confidence 4566777889999999999999999998654321111 256899999999999999999999998888887888999999
Q ss_pred hhccccccCCC-ChHHHHHHHHHHHHHHHhCCcceeeeCCcc---CHHHHHHHHHHhCCeeEeeehhccCCCCCCccccc
Q 014702 108 HDRIWPYESNM-TEEDSYISTLLCGIELIHSGVTCFAEAGGQ---HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAV 183 (420)
Q Consensus 108 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 183 (420)
...+|+.+..+ ..++.+..+.....+++++||||+++++.. ......++....|+|..++....+... +.. ..
T Consensus 93 ~~~~~~~e~~~~~~~~~~~~a~~~~~e~l~~GvTtv~d~~~~~~~~~~~~~~a~~~~G~R~~~~~~~~~~~~--~~~-~~ 169 (429)
T cd01303 93 ETYTFPEEAKFADPAYAREVYGRFLDELLRNGTTTACYFATIHPESTEALFEEAAKRGQRAIAGKVCMDRNA--PEY-YR 169 (429)
T ss_pred HhhhhHHHHhcCCHHHHHHHHHHHHHHHHhCCceEEEeecccChhHHHHHHHHHHHhCCeEEEeeeeecCCC--Ccc-cc
Confidence 88888766653 455656667778899999999999997643 245667888899999988766554321 111 11
Q ss_pred CChhHHHHHHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHcC-CccceeccCCcchhHHHHhhcCCCCC
Q 014702 184 RTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFK-TGIHMHVAEIPYENQVVMDTRKVDHG 262 (420)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~-~~v~~h~~~~~~~~~~~~~~~~~~~~ 262 (420)
...........++++++... .+.+...++++..+..+++.++++.++|++++ +++++|+.++..+.+......+....
T Consensus 170 ~~~~~~~~~~~~~i~~~~~~-~~~v~~~~~p~~~~~~s~e~l~~~~~~A~~~g~~~v~~H~~e~~~e~~~~~~~~g~~~~ 248 (429)
T cd01303 170 DTAESSYRDTKRLIERWHGK-SGRVKPAITPRFAPSCSEELLAALGKLAKEHPDLHIQTHISENLDEIAWVKELFPGARD 248 (429)
T ss_pred cCHHHHHHHHHHHHHHHhCc-CCceEEEEecCcCCcCCHHHHHHHHHHHHHCCCCeEEEeeCCCHHHHHHHHHHcCCCCC
Confidence 22334455566666666543 35778778889899999999999999999999 99999999988776666665543357
Q ss_pred hHHHHHHhccCCCccceeeccCCChhhHHHHHhcCCeEEECccchhhc-cCcccHHHHHHcCCcEEEccCCCCCCCCCCH
Q 014702 263 TVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNRMSI 341 (420)
Q Consensus 263 ~~~~l~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~gv~~~lgsD~~~~~~~~~~ 341 (420)
+.+.++..++++.+.++.|+.++++++++++++.|+.+++||.++..+ .+..|++++.+.|+++++|||+... +..++
T Consensus 249 p~~~l~~~G~l~~~~~l~H~~~l~~~~~~~l~~~g~~v~~~P~sn~~l~~g~~~~~~~~~~Gv~v~lGtD~~~~-~~~d~ 327 (429)
T cd01303 249 YLDVYDKYGLLTEKTVLAHCVHLSEEEFNLLKERGASVAHCPTSNLFLGSGLFDVRKLLDAGIKVGLGTDVGGG-TSFSM 327 (429)
T ss_pred HHHHHHHCCCCCCCcEEEeCCCCCHHHHHHHHHcCCEEEECccchhhhccCCCCHHHHHHCCCeEEEeccCCCC-CCccH
Confidence 889999999999999999999999999999999999999999998766 6788999999999999999998643 45689
Q ss_pred HHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEcCCCC
Q 014702 342 VDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSW 410 (420)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~ 410 (420)
+++++.+....+.... ....+.+++.+++++++|.++|+++|+++++|+|++||.|||||+|.+++
T Consensus 328 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~al~~aT~~gA~~lg~~~~~Gsle~Gk~ADlvvld~~~~ 393 (429)
T cd01303 328 LDTLRQAYKVSRLLGY---ELGGHAKLSPAEAFYLATLGGAEALGLDDKIGNFEVGKEFDAVVIDPSAT 393 (429)
T ss_pred HHHHHHHHHHHHhhcc---ccCCcCCCCHHHHHHHHhhHHHHHcCCCCCCcCcCCCCccCEEEEcCCCc
Confidence 9999988765542211 01123568999999999999999999988899999999999999999975
No 8
>PRK08204 hypothetical protein; Provisional
Probab=100.00 E-value=1.4e-47 Score=365.92 Aligned_cols=381 Identities=25% Similarity=0.367 Sum_probs=300.8
Q ss_pred CceEEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhccc
Q 014702 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (420)
Q Consensus 18 ~~~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~ 97 (420)
|..++|+|+.|++.|+...++.+++|+|+||+|++|++..+. ...++||++|++|+|||||+|+|+.+...++.
T Consensus 1 ~~~~li~~~~v~~~~~~~~~~~~~~v~V~~g~I~~Vg~~~~~------~~~~viD~~g~~v~PGlId~H~H~~~~~~~~~ 74 (449)
T PRK08204 1 MKRTLIRGGTVLTMDPAIGDLPRGDILIEGDRIAAVAPSIEA------PDAEVVDARGMIVMPGLVDTHRHTWQSVLRGI 74 (449)
T ss_pred CCcEEEECcEEEecCCCCCccccceEEEECCEEEEecCCCCC------CCCeEEeCCCCEEecCEEeeeeccchhhhccc
Confidence 456889999999988765678899999999999999986431 25689999999999999999999998888887
Q ss_pred CCCCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCcc-----CHHHHHHHHHHhCCeeEeeehhcc
Q 014702 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-----HVSEMAKAVELLGLRACLVQSTMD 172 (420)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~-----~~~~~~~~~~~~g~~~~~~~~~~~ 172 (420)
..+.++.+|.....++....+.+++.+........+++.+||||+++++.. ......+...+.|++..++....+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~L~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~G~r~~~~~~~~~ 154 (449)
T PRK08204 75 GADWTLQTYFREIHGNLGPMFRPEDVYIANLLGALEALDAGVTTLLDWSHINNSPEHADAAIRGLAEAGIRAVFAHGSPG 154 (449)
T ss_pred cCCCcHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHhcCCeEEeecccccCChhHHHHHHHHHHHcCCeEEEEccccC
Confidence 777788899988777778888888888888888899999999999986522 234567788889999877655543
Q ss_pred CCCCCCcccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHcCCccceeccCCcchhHH
Q 014702 173 CGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQV 252 (420)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~ 252 (420)
.++ .+..............+.+++....+..+.....++.....+++.+..+++.++++|+++++|+.++...
T Consensus 155 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~e~~~~--- 227 (449)
T PRK08204 155 PSP----YWPFDSVPHPREDIRRVKKRYFSSDDGLLTLGLAIRGPEFSSWEVARADFRLARELGLPISMHQGFGPWG--- 227 (449)
T ss_pred CCC----CCCcchhhhhHHHHHHHHHhhccCCCCceEEEEecCCcccCCHHHHHHHHHHHHHcCCcEEEEEcCCCcc---
Confidence 322 1221122333444555556555544455666566666666788999999999999999999999886542
Q ss_pred HHhhcCCCCChHHHHHHhccCCCccceeeccCCChhhHHHHHhcCCeEEECccchhhc-cCcccHHHHHHcCCcEEEccC
Q 014702 253 VMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTD 331 (420)
Q Consensus 253 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~gv~~~lgsD 331 (420)
.....++.+...+.++.+.++.|+.++++++++++++.|+.+++||.++... .+..|++++.++|+++++|||
T Consensus 228 ------~~~~~~~~l~~~g~~~~~~~i~H~~~~~~~~~~~la~~g~~v~~~P~~~~~~g~~~~~~~~~~~~Gv~v~lGtD 301 (449)
T PRK08204 228 ------ATPRGVEQLHDAGLLGPDLNLVHGNDLSDDELKLLADSGGSFSVTPEIEMMMGHGYPVTGRLLAHGVRPSLGVD 301 (449)
T ss_pred ------cCCCHHHHHHHCCCCCCCeEEEecCCCCHHHHHHHHHcCCCEEEChHHHhhhcCCCCcHHHHHhcCCceeeccc
Confidence 1234666777888888889999999999999999999999999999987665 567899999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHhccccccc--C---CCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEc
Q 014702 332 GAPSNNRMSIVDEMYLASLINKGREVFA--N---GTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVD 406 (420)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d 406 (420)
+++. ...+++.+++.+....+...... . .+....++++.++++++|.|+|+++|+++++|+|++||.|||||+|
T Consensus 302 ~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~T~~gA~~lg~~~~~G~le~Gk~ADlvvld 380 (449)
T PRK08204 302 VVTS-TGGDMFTQMRFALQAERARDNAVHLREGGMPPPRLTLTARQVLEWATIEGARALGLEDRIGSLTPGKQADLVLID 380 (449)
T ss_pred cCCC-CCcCHHHHHHHHHHHHHhhcccccccccccCCCcCCCCHHHHHHHHhHHHHHHcCCCCCCcccCCCCcCCEEEEc
Confidence 8643 45689999998876554321110 0 0112357999999999999999999998889999999999999999
Q ss_pred CCCCCCCCCCCC
Q 014702 407 PFSWPMVPVHDR 418 (420)
Q Consensus 407 ~~~~~~~~~~~~ 418 (420)
.++++..|..+|
T Consensus 381 ~~~~~~~p~~dp 392 (449)
T PRK08204 381 ATDLNLAPVHDP 392 (449)
T ss_pred CCCccccCCcCh
Confidence 998888887665
No 9
>PRK12393 amidohydrolase; Provisional
Probab=100.00 E-value=2.7e-47 Score=362.10 Aligned_cols=385 Identities=27% Similarity=0.370 Sum_probs=305.2
Q ss_pred CceEEEEecE-EEeecCCceeeece-eEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhc
Q 014702 18 SSTMILHNAV-IVTMDKESRVFRNG-GVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAK 95 (420)
Q Consensus 18 ~~~~li~n~~-v~~~d~~~~~~~~~-~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~ 95 (420)
|.+++|+|+. |++.++...++.++ +|+|+||+|++|++. .. ..++++||++|++|+|||||+|+|+.++.++
T Consensus 1 ~~~~li~~~~~v~~~~~~~~~~~~~~~v~I~~g~I~~Vg~~-~~-----~~~~~viD~~g~~v~PG~VnaH~Hl~~~~~r 74 (457)
T PRK12393 1 MPSLLIRNAAAIMTGLPGDAARLGGPDIRIRDGRIAAIGAL-TP-----LPGERVIDATDCVVYPGWVNTHHHLFQSLLK 74 (457)
T ss_pred CCcEEEECCeEEEecCCCccccccCceEEEECCEEEEEecc-CC-----CCCCeEEeCCCCEEecCEeecccCccccccc
Confidence 4689999996 78776644445555 899999999999982 11 1367999999999999999999999999988
Q ss_pred ccC--CCCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCcc--------CHHHHHHHHHHhCCeeE
Q 014702 96 GIA--DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--------HVSEMAKAVELLGLRAC 165 (420)
Q Consensus 96 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~--------~~~~~~~~~~~~g~~~~ 165 (420)
|.. .+.++.+|+....|+.+..+++++.+........+++++||||+.++... .....+++..+.|+|..
T Consensus 75 g~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~~~~~~a~~~~G~R~~ 154 (457)
T PRK12393 75 GVPAGINQSLTAWLAAVPYRFRARFDEDLFRLAARIGLVELLRSGCTTVADHHYLYHPGMPFDTGDILFDEAEALGMRFV 154 (457)
T ss_pred ccccccCCchHHHhhhCcchhhhhCCHHHHHHHHHHHHHHHHhCCccEeecchhhcccccccchHHHHHHHHHHcCCeEE
Confidence 863 45678899998888888888888888899999999999999999987521 23567888999999998
Q ss_pred eeehhccCCCCCCc----ccccCChhHHHHHHHHHHHHhcCCC-CCceEEEEeeccc-cccCHHHHHHHHHHHHHcCCcc
Q 014702 166 LVQSTMDCGEGLPA----SWAVRTTDDCIQSQKELYAKHHHAA-DGRIRIWFGIRQI-MNATDRLLLETRDMAREFKTGI 239 (420)
Q Consensus 166 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~-~~~~~~~l~~~~~~a~~~~~~v 239 (420)
++....+...+.+. .+........++....+.+.+.... ...+.+.+.++.. +..+++.++++.++++++|+++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~g~~~ 234 (457)
T PRK12393 155 LCRGGATQTRGDHPGLPTALRPETLDQMLADVERLVSRYHDASPDSLRRVVVAPTTPTFSLPPELLREVARAARGMGLRL 234 (457)
T ss_pred EEccccccccccCCCCCCcccccCHHHHHHHHHHHHHHhcCCCcCCceEEEEcCCCCCCCcCHHHHHHHHHHHHHcCCeE
Confidence 87655432221111 1111233444555566666654322 2346666777776 7889999999999999999999
Q ss_pred ceeccCCcchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCCChhhHHHHHhcCCeEEECccchhhc-cCcccHHH
Q 014702 240 HMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKE 318 (420)
Q Consensus 240 ~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~ 318 (420)
++|+.+...+.+......+ ..+.+.++..+.++.+.++.|+.++++++++++++.|+.+++||.++++. .+.+|+++
T Consensus 235 ~~H~~e~~~~~~~~~~~~g--~~~~~~l~~~g~l~~~~~~~H~~~l~~~d~~~la~~g~~v~~~P~sn~~lg~g~~~~~~ 312 (457)
T PRK12393 235 HSHLSETVDYVDFCREKYG--MTPVQFVAEHDWLGPDVWFAHLVKLDAEEIALLAQTGTGIAHCPQSNGRLGSGIAPALA 312 (457)
T ss_pred EEEeCCCHHHHHHHHHHhC--CCHHHHHHHcCCCCCCeEEEEEecCCHHHHHHHHHcCCeEEECchhhhhhcccCCCHHH
Confidence 9999988766555554433 34778889999999999999999999999999999999999999998776 67899999
Q ss_pred HHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCc
Q 014702 319 MLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGK 398 (420)
Q Consensus 319 ~~~~gv~~~lgsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~ 398 (420)
+++.|+.+++|||+..++...+++.+++.+.+..+.. .....++.+++++++|.+||+++|+++ +|+|++|+
T Consensus 313 ~~~~Gv~v~lGtD~~~~~~~~d~~~~~~~a~~~~~~~-------~~~~~~~~~~~l~~~T~~~A~~l~~~~-~G~l~~G~ 384 (457)
T PRK12393 313 MEAAGVPVSLGVDGAASNESADMLSEAHAAWLLHRAE-------GGADATTVEDVVHWGTAGGARVLGLDA-IGTLAVGQ 384 (457)
T ss_pred HHHCCCeEEEecCCcccCCCccHHHHHHHHHHHhhhc-------CCCCCCCHHHHHHHHhHHHHHHhCCCC-CCCcCCCC
Confidence 9999999999999876656789999999887665421 112359999999999999999999975 79999999
Q ss_pred cccEEEEcCCCCCCCCCCCC
Q 014702 399 KADMVVVDPFSWPMVPVHDR 418 (420)
Q Consensus 399 ~ADlvv~d~~~~~~~~~~~~ 418 (420)
.|||+|+|.++....|..+|
T Consensus 385 ~ADlvv~d~~~~~~~~~~~~ 404 (457)
T PRK12393 385 AADLAIYDLDDPRFFGLHDP 404 (457)
T ss_pred cCCEEEEeCCCcccCCCCCc
Confidence 99999999997766665443
No 10
>PRK06038 N-ethylammeline chlorohydrolase; Provisional
Probab=100.00 E-value=3.8e-47 Score=359.06 Aligned_cols=374 Identities=38% Similarity=0.628 Sum_probs=305.8
Q ss_pred ceEEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhcccC
Q 014702 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (420)
Q Consensus 19 ~~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~~ 98 (420)
.+++|+|++|+++++ ..+.+++|+|++|+|++|++.... ...++||++|++|+|||||+|+|+.++.+++..
T Consensus 2 ~~~~~~~~~i~~~~~--~~~~~~~v~v~~g~I~~i~~~~~~------~~~~~id~~g~~v~PG~vd~H~H~~~~~~~g~~ 73 (430)
T PRK06038 2 ADIIIKNAYVLTMDA--GDLKKGSVVIEDGTITEVSESTPG------DADTVIDAKGSVVMPGLVNTHTHAAMTLFRGYA 73 (430)
T ss_pred CCEEEEccEEEECCC--CeeeccEEEEECCEEEEecCCCCC------CCCEEEeCCCCEEecCeeecccCcchhhhhhcc
Confidence 468999999998763 356788999999999999985321 355899999999999999999999999888887
Q ss_pred CCCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCccCHHHHHHHHHHhCCeeEeeehhccCCCCCC
Q 014702 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLP 178 (420)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 178 (420)
.+.++.+|+....|+....+.+++.+..+.....+++++|+|+++++.. ......++..+.|++...+....+...
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~G~Ttv~D~~~-~~~~~~~a~~~~GiR~~~~~~~~d~~~--- 149 (430)
T PRK06038 74 DDLPLAEWLNDHIWPAEAKLTAEDVYAGSLLACLEMIKSGTTSFADMYF-YMDEVAKAVEESGLRAALSYGMIDLGD--- 149 (430)
T ss_pred CCCCHHHHHHhhhhhchhcCCHHHHHHHHHHHHHHHHhcCceeEEcccc-CHHHHHHHHHHhCCeEEEEchhccCCC---
Confidence 7789999998877877777888888888888899999999999999863 345667788889999877654433211
Q ss_pred cccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcC
Q 014702 179 ASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRK 258 (420)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~ 258 (420)
.......++...++++.+.....+.+...++++..+.++++.++.+++.|+++|+++++|+.+............+
T Consensus 150 ----~~~~~~~l~~~~~~i~~~~~~~~g~v~~~~~~~~~~~~s~e~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~G 225 (430)
T PRK06038 150 ----DEKGEAELKEGKRFVKEWHGAADGRIKVMYGPHAPYTCSEEFLSKVKKLANKDGVGIHIHVLETEAELNQMKEQYG 225 (430)
T ss_pred ----ccchHHHHHHHHHHHHHhcCCCCCceEEEEeCCcCccCCHHHHHHHHHHHHHcCCcEEEEcCCCHHHHHHHHHHhC
Confidence 1123344556666677766545567888888888889999999999999999999999999998776555554433
Q ss_pred CCCChHHHHHHhccCCCccceeeccCCChhhHHHHHhcCCeEEECccchhhc-cCcccHHHHHHcCCcEEEccCCCCCCC
Q 014702 259 VDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNN 337 (420)
Q Consensus 259 ~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~gv~~~lgsD~~~~~~ 337 (420)
..+++.++..++++.+.++.|+.++++++++++++.|+.+++||.++... .+.+|++++.+.|+.+++|||++....
T Consensus 226 --~~~i~~l~~~g~l~~r~~~~H~~~l~~~~~~~la~~g~~v~~~P~~n~~~~~~~~p~~~~~~~Gv~v~lGtD~~~~~~ 303 (430)
T PRK06038 226 --MCSVNYLDDIGFLGPDVLAAHCVWLSDGDIEILRERGVNVSHNPVSNMKLASGIAPVPKLLERGVNVSLGTDGCASNN 303 (430)
T ss_pred --CCHHHHHHHcCCCCCCeEEEEEecCCHHHHHHHHhcCCEEEEChHHhhhhccCCCCHHHHHHCCCeEEEeCCCCccCC
Confidence 34778889999999999999999999999999999999999999998765 578899999999999999999876656
Q ss_pred CCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEcCCCCCCCCCCC
Q 014702 338 RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHD 417 (420)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~~ 417 (420)
..+++.+++.+.+..+... ..+.+++++++++++|.|+|+++|++ .|+|++|+.||||++|.+.+...|..+
T Consensus 304 ~~d~~~~~~~a~~~~~~~~------~~~~~~~~~~al~~aT~~gA~~lg~~--~G~l~~G~~ADlvvld~~~~~~~p~~~ 375 (430)
T PRK06038 304 NLDMFEEMKTAALLHKVNT------MDPTALPARQVLEMATVNGAKALGIN--TGMLKEGYLADIIIVDMNKPHLTPVRD 375 (430)
T ss_pred CcCHHHHHHHHHHHhhhcc------CCCCcCCHHHHHHHHhHHHHHHhCCC--CCccCCCcccCEEEEeCCCCccCCCCC
Confidence 7789999998876655321 11246899999999999999999995 599999999999999999766666555
Q ss_pred C
Q 014702 418 R 418 (420)
Q Consensus 418 ~ 418 (420)
+
T Consensus 376 ~ 376 (430)
T PRK06038 376 V 376 (430)
T ss_pred h
Confidence 4
No 11
>PRK06380 metal-dependent hydrolase; Provisional
Probab=100.00 E-value=3.5e-47 Score=359.50 Aligned_cols=366 Identities=34% Similarity=0.528 Sum_probs=296.3
Q ss_pred eEEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhcccCC
Q 014702 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (420)
Q Consensus 20 ~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~~~ 99 (420)
+++|+|++|+++++. ..+.+++|+|++|+|++||+... ...++||++|++|+|||||+|+|+.+...++...
T Consensus 2 ~~li~~~~v~~~~~~-~~~~~~~v~i~~g~I~~ig~~~~-------~~~~viD~~g~~v~PG~Vd~H~Hl~~~~~rg~~~ 73 (418)
T PRK06380 2 SILIKNAWIVTQNEK-REILQGNVYIEGNKIVYVGDVNE-------EADYIIDATGKVVMPGLINTHAHVGMTASKGLFD 73 (418)
T ss_pred eEEEEeeEEEECCCC-ceeeeeeEEEECCEEEEecCCCC-------CCCEEEECCCCEEccCEEeeccCCCccccCCccc
Confidence 589999999987642 35568999999999999998532 2568999999999999999999999999998887
Q ss_pred CCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCccCHHHHHHHHHHhCCeeEeeehhccCCCCCCc
Q 014702 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPA 179 (420)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 179 (420)
+.++.+|+.. .|+....+++++.+........+++++||||+.++.. ......++....|+|.+++...++.....
T Consensus 74 ~~~l~~~~~~-~~~~~~~~~~e~~~~~~~~~~~e~l~~G~Tt~~d~~~-~~~~~~~a~~~~G~r~~~~~~~~~~~~~~-- 149 (418)
T PRK06380 74 DVDLEEFLMK-TFKYDSKRTREGIYNSAKLGMYEMINSGITAFVDLYY-SEDIIAKAAEELGIRAFLSWAVLDEEITT-- 149 (418)
T ss_pred CCCHHHHHHH-HHhhhhcCCHHHHHHHHHHHHHHHHhcCCeEEEcccc-ChHHHHHHHHHhCCeEEEecccccCCccc--
Confidence 8889999987 6777778888888888888999999999999999863 34667788899999998887665532110
Q ss_pred ccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCC
Q 014702 180 SWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKV 259 (420)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~ 259 (420)
...........+++++.. ...+...+++++.+..+++.+++++++|+++|+++++|+.+...+........
T Consensus 150 -----~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~s~e~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~-- 220 (418)
T PRK06380 150 -----QKGDPLNNAENFIREHRN--EELVTPSIGVQGIYVANDETYLKAKEIAEKYDTIMHMHLSETRKEVYDHVKRT-- 220 (418)
T ss_pred -----ccchHHHHHHHHHHHhcC--CCCeEEEEECCCCccCCHHHHHHHHHHHHHcCCCEEEEeCCcHHHHHHHHHHh--
Confidence 011122334455555442 35688888889999999999999999999999999999999765443333332
Q ss_pred CCChHHHHHHhccCCCccceeeccCCChhhHHHHHhcCCeEEECccchhhcc--CcccHHHHHHcCCcEEEccCCCCCCC
Q 014702 260 DHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRML--GFAPIKEMLHADICVSLGTDGAPSNN 337 (420)
Q Consensus 260 ~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~--~~~~~~~~~~~gv~~~lgsD~~~~~~ 337 (420)
+..+++.++.++.++.+.++.|+.++++++++++++.|+.+.+||.++.+.. +.+|++++++.|+++++|||+....+
T Consensus 221 g~~~ie~~~~~g~l~~~~~~~H~~~l~~~d~~~la~~g~~v~~~P~sn~~l~~~g~~p~~~~~~~Gv~v~lGTD~~~~~~ 300 (418)
T PRK06380 221 GERPVEHLEKIGFLNSKLIAAHCVWATYHEIKLLSKNGVKVSWNSVSNFKLGTGGSPPIPEMLDNGINVTIGTDSNGSNN 300 (418)
T ss_pred CCCHHHHHHHCCCCCCCeEEEEeecCCHHHHHHHHHcCCEEEECHHHHHhhccCCCCcHHHHHHCCCeEEEcCCCCcCCC
Confidence 3457888999999999999999999999999999999999999999987763 68999999999999999999876556
Q ss_pred CCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEcCCCCCCCC
Q 014702 338 RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVP 414 (420)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~ 414 (420)
..+++.+++.+....+... ..+..++++++++++|.++|+++|++ +|+|++||.||||++|.+.+...|
T Consensus 301 ~~d~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~aT~~gA~~lg~~--~G~l~~G~~ADlvv~d~~~~~~~p 369 (418)
T PRK06380 301 SLDMFEAMKFSALSVKNER------WDASIIKAQEILDFATINAAKALELN--AGSIEVGKLADLVILDARAPNMIP 369 (418)
T ss_pred CcCHHHHHHHHHHHhhhcc------CCCCcCCHHHHHHHHHHHHHHHhCCC--CCccCCCccCCEEEEeCCCCccCC
Confidence 6789999988765443221 11224899999999999999999993 799999999999999998555555
No 12
>PRK08203 hydroxydechloroatrazine ethylaminohydrolase; Reviewed
Probab=100.00 E-value=3.5e-47 Score=362.46 Aligned_cols=383 Identities=31% Similarity=0.495 Sum_probs=304.4
Q ss_pred EEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhccc--C
Q 014702 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI--A 98 (420)
Q Consensus 21 ~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~--~ 98 (420)
+++.|+.|+++|+...++.+++|+|+||+|++|++..+.+. .+.++||++|++|||||||+|+|+++...++. .
T Consensus 4 ~i~~~~~v~~~~~~~~~~~~~~v~I~~g~I~~Vg~~~~~~~----~~~~vID~~g~~v~PGlVn~H~H~~~~~~~g~~~~ 79 (451)
T PRK08203 4 WIKNPLAIVTMDAARREIADGGLVVEGGRIVEVGPGGALPQ----PADEVFDARGHVVTPGLVNTHHHFYQTLTRALPAA 79 (451)
T ss_pred EEEeccEEEEeCCCceEeeccEEEEECCEEEEEeCCccCCC----CCCeEEeCCCCEEecceEeccccccchhccccccc
Confidence 44555799999876678899999999999999999754321 25689999999999999999999999888877 6
Q ss_pred CCCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCcc-------CHHHHHHHHHHhCCeeEeeehhc
Q 014702 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-------HVSEMAKAVELLGLRACLVQSTM 171 (420)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~-------~~~~~~~~~~~~g~~~~~~~~~~ 171 (420)
.+.++.+|+.. .++....+++++.+..+.....+++++|+|++++++.. ......++....|+|...+...+
T Consensus 80 ~~~~~~~~~~~-~~~~~~~~~~e~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~~~~~a~~~~G~R~~~~~~~~ 158 (451)
T PRK08203 80 QDAELFPWLTT-LYPVWARLTPEMVRVATQTALAELLLSGCTTSSDHHYLFPNGLRDALDDQIEAAREIGMRFHATRGSM 158 (451)
T ss_pred CCCcHHHHHHH-HhHHHHhCCHHHHHHHHHHHHHHHHhcCcCEEEcceeeccccccchHHHHHHHHHHcCCeEEEeccee
Confidence 67788889865 35555667788888888889999999999999987522 14566888899999998776554
Q ss_pred cCCC---CCCcccccCChhHHHHHHHHHHHHhcCCC-CCceEEEEeeccccccCHHHHHHHHHHHHHcCCccceeccCCc
Q 014702 172 DCGE---GLPASWAVRTTDDCIQSQKELYAKHHHAA-DGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIP 247 (420)
Q Consensus 172 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~ 247 (420)
+... +.+...........++...++++++.... .+.+++.+.++..+..+++.+.++++.++++|+++++|+.+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~e~~ 238 (451)
T PRK08203 159 SLGESDGGLPPDSVVEDEDAILADSQRLIDRYHDPGPGAMLRIALAPCSPFSVSRELMRESAALARRLGVRLHTHLAETL 238 (451)
T ss_pred ecCCccCCCCccccccCHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEeCCCH
Confidence 3221 11222222234455566666666654332 2578888888888889999999999999999999999998887
Q ss_pred chhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCCChhhHHHHHhcCCeEEECccchhhc-cCcccHHHHHHcCCcE
Q 014702 248 YENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICV 326 (420)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~gv~~ 326 (420)
...+...+..+ ..+.+.+...++++.+.++.|+.++++++++++++.|+.+++||.++.+. .+.+|++++.+.|+++
T Consensus 239 ~~~~~~~~~~g--~~~~~~l~~~g~l~~~~~~~H~~~l~~~~~~~la~~g~~v~~~P~~~~~l~~~~~~~~~~~~~Gv~v 316 (451)
T PRK08203 239 DEEAFCLERFG--MRPVDYLEDLGWLGPDVWLAHCVHLDDAEIARLARTGTGVAHCPCSNMRLASGIAPVRELRAAGVPV 316 (451)
T ss_pred HHHHHHHHHhC--CCHHHHHHHcCCCCCCeEEEEEeCCCHHHHHHHHhcCCeEEECcHHhhhhccCCCCHHHHHHCCCeE
Confidence 66555544333 35788889999999999999999999999999999999999999988766 5688999999999999
Q ss_pred EEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEc
Q 014702 327 SLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVD 406 (420)
Q Consensus 327 ~lgsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d 406 (420)
++|||++..+...+++.+++.+....+... ....+++.++++++|.|||+++|++ ++|+|++||.|||+|+|
T Consensus 317 ~lGtD~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~i~~~~~l~~~T~~~A~~lg~~-~~G~l~~G~~ADlvv~d 388 (451)
T PRK08203 317 GLGVDGSASNDGSNLIGEARQALLLQRLRY-------GPDAMTAREALEWATLGGARVLGRD-DIGSLAPGKLADLALFD 388 (451)
T ss_pred EEecCCCccCCCcCHHHHHHHHHHHhhccc-------CCCCCCHHHHHHHHHHHHHHHhCCC-CCCCcCCCCccCEEEEc
Confidence 999998765556789999988766554221 1235999999999999999999997 57999999999999999
Q ss_pred CCCCCCCCCCCC
Q 014702 407 PFSWPMVPVHDR 418 (420)
Q Consensus 407 ~~~~~~~~~~~~ 418 (420)
.+++...|.++|
T Consensus 389 ~~~~~~~~~~~p 400 (451)
T PRK08203 389 LDELRFAGAHDP 400 (451)
T ss_pred CCccccCCccCh
Confidence 998766555555
No 13
>PRK09228 guanine deaminase; Provisional
Probab=100.00 E-value=2.6e-46 Score=352.57 Aligned_cols=375 Identities=25% Similarity=0.330 Sum_probs=296.6
Q ss_pred ceEEEEecEEE-eec-------CCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccc
Q 014702 19 STMILHNAVIV-TMD-------KESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTS 90 (420)
Q Consensus 19 ~~~li~n~~v~-~~d-------~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~ 90 (420)
..+++++..|+ +.. ....++++++|+|+||+|++||+..+....++ ...++||++|++|+|||||+|+|+.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~I~I~~g~I~~Vg~~~~~~~~~~-~~~~viD~~g~lv~PGlVn~H~H~~ 80 (433)
T PRK09228 2 TTKAYRGRLLHFTADPAEVDDEDALRYIEDGLLLVEDGRIVAAGPYAELRAQLP-ADAEVTDYRGKLILPGFIDTHIHYP 80 (433)
T ss_pred ceEEEEEEEEccCCCccccCCCCcEEEECCeEEEEECCEEEEEcChHHhhhhcC-CCCeEEeCCCCEEecceeccccccc
Confidence 45666655555 222 23567899999999999999999655432222 1368999999999999999999998
Q ss_pred hhhhcccCCCCChHHHhhhccccccCCC-ChHHHHHHHHHHHHHHHhCCcceeeeCCccC---HHHHHHHHHHhCCeeEe
Q 014702 91 QQLAKGIADDVDLMTWLHDRIWPYESNM-TEEDSYISTLLCGIELIHSGVTCFAEAGGQH---VSEMAKAVELLGLRACL 166 (420)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~~---~~~~~~~~~~~g~~~~~ 166 (420)
++..++. .+.++.+|+....|+.+..+ .+++.+..+.....+++++||||+.+++... .+...++..+.|+|..+
T Consensus 81 ~~~~~g~-~~~~l~~wl~~~~~~~e~~~~~~~~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~a~~~~GiR~~~ 159 (433)
T PRK09228 81 QTDMIAS-YGEQLLDWLNTYTFPEERRFADPAYAREVAEFFLDELLRNGTTTALVFGTVHPQSVDALFEAAEARNMRMIA 159 (433)
T ss_pred chhhccC-CchHHHHHHHhhhhHHHHHhCCHHHHHHHHHHHHHHHHhCCceEEEeccccCHHHHHHHHHHHHHcCCeEEe
Confidence 8877763 23467899988778766543 4445566666788999999999999976432 35667788889999988
Q ss_pred eehhccCCCCCCcccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHc-CCccceeccC
Q 014702 167 VQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREF-KTGIHMHVAE 245 (420)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~-~~~v~~h~~~ 245 (420)
+...++.. .+. ..........+...++++++... +.+.+.+.++..+..+++.++++.++|+++ ++++++|+.+
T Consensus 160 ~~~~~~~~--~~~-~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~p~~~~t~s~~~l~~~~~lA~~~~~~~i~~Hl~E 234 (433)
T PRK09228 160 GKVLMDRN--APD-GLRDTAESGYDDSKALIERWHGK--GRLLYAITPRFAPTSTPEQLEAAGALAREHPDVWIQTHLSE 234 (433)
T ss_pred eeeeecCC--CCc-ccccCHHHHHHHHHHHHHHHhCC--CCceEEEECCcCCcCCHHHHHHHHHHHHHCCCCceEEeecC
Confidence 77765432 111 11122344455566666666543 577888888888899999999999999998 9999999999
Q ss_pred CcchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCCChhhHHHHHhcCCeEEECccchhhc-cCcccHHHHHHcCC
Q 014702 246 IPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADI 324 (420)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~gv 324 (420)
+..+.+...+..+....+.+.++..++++.+.++.|+.++++++++++++.|+.+++||.+++.+ .+..|+.++.+.|+
T Consensus 235 ~~~e~~~~~~~~g~~~~~~~~l~~~G~l~~~~~~~H~~~l~~~~~~~la~~g~~v~~~P~sn~~lg~g~~~~~~~~~~Gv 314 (433)
T PRK09228 235 NLDEIAWVKELFPEARDYLDVYERYGLLGPRAVFAHCIHLEDRERRRLAETGAAIAFCPTSNLFLGSGLFDLKRADAAGV 314 (433)
T ss_pred ChhHHHHHHHHcCCCCCHHHHHHHcCCCCCCeEEEeccCCCHHHHHHHHHcCCeEEECCccHHhhcCCCcCHHHHHHCCC
Confidence 99887777776665556788999999999999999999999999999999999999999998766 67899999999999
Q ss_pred cEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEE
Q 014702 325 CVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVV 404 (420)
Q Consensus 325 ~~~lgsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv 404 (420)
++++|||+.. ++..+++.+++.+....+. ...+++.+++++++|.+||+++|+++++|+|++||.||||+
T Consensus 315 ~v~lGtD~~~-~~~~d~~~~~~~~~~~~~~---------~~~~~~~~~~l~~aT~~~A~~lg~~~~~G~l~~Gk~ADlvv 384 (433)
T PRK09228 315 RVGLGTDVGG-GTSFSMLQTMNEAYKVQQL---------QGYRLSPFQAFYLATLGGARALGLDDRIGNLAPGKEADFVV 384 (433)
T ss_pred eEEEecCCCC-CCCCCHHHHHHHHHHHhhc---------ccCCCCHHHHHHHHhHHHHHHhCCCCCCcccCCCCCCCEEE
Confidence 9999999854 3456899999888766542 12358999999999999999999987789999999999999
Q ss_pred EcCCCC
Q 014702 405 VDPFSW 410 (420)
Q Consensus 405 ~d~~~~ 410 (420)
+|.+..
T Consensus 385 ~d~~~~ 390 (433)
T PRK09228 385 LDPAAT 390 (433)
T ss_pred EcCCCC
Confidence 998853
No 14
>PRK08393 N-ethylammeline chlorohydrolase; Provisional
Probab=100.00 E-value=4e-46 Score=351.79 Aligned_cols=374 Identities=33% Similarity=0.551 Sum_probs=303.4
Q ss_pred ceEEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhcccC
Q 014702 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (420)
Q Consensus 19 ~~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~~ 98 (420)
++++|+|++|+++++ ....+++|+|+||+|++|++.... ...++||+.|++|+|||||+|+|+.+...++..
T Consensus 1 ~~~~i~~~~i~~~~~--~~~~~~~i~i~~g~I~~v~~~~~~------~~~~~id~~~~~v~Pg~vd~H~H~~~~~~rg~~ 72 (424)
T PRK08393 1 MSILIKNGYVIYGEN--LKVIRADVLIEGNKIVEVKRNINK------PADTVIDASGSVVSPGFINAHTHSPMVLLRGLA 72 (424)
T ss_pred CeEEEECcEEEeCCC--CceecceEEEECCEEEEecCCCCC------CCCeEEeCCCCEEccCeeeeccCcchHhhhhcc
Confidence 368999999997553 345678999999999999875321 245799999999999999999999999888888
Q ss_pred CCCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCccCHHHHHHHHHHhCCeeEeeehhccCCCCCC
Q 014702 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLP 178 (420)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 178 (420)
.+.++.+|+....|+....+.+++.+........+++++|+||+.++. .......++....|++....+...+... +
T Consensus 73 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~GvTtv~d~~-~~~~~~~~a~~~~G~r~~~~~~~~~~~~--~ 149 (424)
T PRK08393 73 DDVPLMEWLQNYIWPRERKLKRKDIYWGAYLGLLEMIKSGTTTFVDMY-FHMEEVAKATLEVGLRGYLSYGMVDLGD--E 149 (424)
T ss_pred CCCCHHHHHHhhhccccccCCHHHHHHHHHHHHHHHHhcCceEEeccc-cCHHHHHHHHHHhCCeEEEeceEecCCC--c
Confidence 888999999888888777788888888888899999999999999876 3456777888889999877654433211 1
Q ss_pred cccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcC
Q 014702 179 ASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRK 258 (420)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~ 258 (420)
. .....++...++++.+.....+.+...+.++..+.++++.+++++++++++++++++|+.+...+.+...+..+
T Consensus 150 ~-----~~~~~l~~~~~~~~~~~~~~~~~v~~~~~p~~~~~~s~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~g 224 (424)
T PRK08393 150 E-----KREKEIKETEKLMEFIEKLNSPRVHFVFGPHAPYTCSLALLKWVREKAREWNKLITIHLSETMDEIKQIREKYG 224 (424)
T ss_pred c-----chHHHHHHHHHHHHHHhcCCCCceEEEEeCCcCCcCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHhC
Confidence 0 12233444445556555555566777778888888999999999999999999999999998877766666554
Q ss_pred CCCChHHHHHHhccCCCccceeeccCCChhhHHHHHhcCCeEEECccchhhc-cCcccHHHHHHcCCcEEEccCCCCCCC
Q 014702 259 VDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNN 337 (420)
Q Consensus 259 ~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~gv~~~lgsD~~~~~~ 337 (420)
..+...+...+.++.+.++.|+.++++++++++++.|+.+++||.++... .+..|++++.+.|+++++|||......
T Consensus 225 --~~~~~~l~~~G~l~~~~~~~H~~~l~~~~l~~la~~g~~v~~~P~sn~~lg~g~~~~~~~~~~Gv~v~lGtD~~~~~~ 302 (424)
T PRK08393 225 --KSPVVLLDEIGFLNEDVIAAHGVWLSSRDIRILASAGVTVAHNPASNMKLGSGVMPLRKLLNAGVNVALGTDGAASNN 302 (424)
T ss_pred --cCHHHHHHHcCCCCCCcEEEEeecCCHHHHHHHHhcCCEEEECHHHHHhhccCCCCHHHHHHCCCcEEEecCCCccCC
Confidence 45788899999999999999999999999999999999999999988766 668899999999999999999876555
Q ss_pred CCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEcCCCCCCCCCCC
Q 014702 338 RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHD 417 (420)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~~ 417 (420)
..+++++++.+....+... ..+..++++++++++|.|||+++|++ .|+|++||.||||++|.+.....|..+
T Consensus 303 ~~d~~~~~~~a~~~~~~~~------~~~~~~~~~~al~~aT~~~A~~lg~~--~G~l~~G~~ADlvvld~~~~~~~~~~~ 374 (424)
T PRK08393 303 NLDMLREMKLAALLHKVHN------LDPTIADAETVFRMATQNGAKALGLK--AGVIKEGYLADIAVIDFNRPHLRPINN 374 (424)
T ss_pred chhHHHHHHHHHHHHhhcc------CCCCcCCHHHHHHHHHHHHHHHhCCC--CCccCCCCccCEEEEeCCCCCcCCCCC
Confidence 6789999988765544221 11223789999999999999999995 499999999999999999776667665
Q ss_pred C
Q 014702 418 R 418 (420)
Q Consensus 418 ~ 418 (420)
|
T Consensus 375 ~ 375 (424)
T PRK08393 375 P 375 (424)
T ss_pred h
Confidence 4
No 15
>cd01298 ATZ_TRZ_like TRZ/ATZ family contains enzymes from the atrazine degradation pathway and related hydrolases. Atrazine, a chlorinated herbizide, can be catabolized by a variety of different bacteria. The first three steps of the atrazine dehalogenation pathway are catalyzed by atrazine chlorohydrolase (AtzA), hydroxyatrazine ethylaminohydrolase (AtzB), and N-isopropylammelide N-isopropylaminohydrolase (AtzC). All three enzymes belong to the superfamily of metal dependent hydrolases. AtzA and AtzB, beside other related enzymes are represented in this CD.
Probab=100.00 E-value=3.9e-46 Score=353.90 Aligned_cols=380 Identities=42% Similarity=0.670 Sum_probs=294.7
Q ss_pred EEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhcccCCC
Q 014702 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (420)
Q Consensus 21 ~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~~~~ 100 (420)
++|+|++|+++++ .+.+++++|+|+||||++|++....+. + ...++||+.|++|+|||||+|+|+.++..++....
T Consensus 1 ~~i~~~~v~~~~~-~~~~~~~~v~i~~g~I~~ig~~~~~~~--~-~~~~viD~~g~~i~PGlid~H~Hl~~~~~~~~~~~ 76 (411)
T cd01298 1 ILIRNGTIVTTDP-RRVLEDGDVLVEDGRIVAVGPALPLPA--Y-PADEVIDAKGKVVMPGLVNTHTHLAMTLLRGLADD 76 (411)
T ss_pred CeEEeeEEEEeCC-cceeecceEEEECCEEEEecCcccccc--C-CcCeEEeCCCCEEccCccccccchhhHHhhcccCC
Confidence 4799999998765 567899999999999999998644311 1 35789999999999999999999998877666556
Q ss_pred CChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCccCHHHHHHHHHHhCCeeEeeehhccCCCCCCcc
Q 014702 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPAS 180 (420)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 180 (420)
.++.+|+....+........++.+........+++.+|||++++++........+.....|++..............
T Consensus 77 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~g~r~~~~~~~~~~~~~~--- 153 (411)
T cd01298 77 LPLMEWLKDLIWPLERLLTEEDVYLGALLALAEMIRSGTTTFADMYFFYPDAVAEAAEELGIRAVLGRGIMDLGTED--- 153 (411)
T ss_pred CCHHHHHHhhhhhhhhcCCHHHHHHHHHHHHHHHHhcCccEEECccccchHHHHHHHHHhCCeEEEEcceecCCCcc---
Confidence 67899998887776656666777777777888899999999999875443455566667788887665544322110
Q ss_pred cccCChhHHHHHHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCC
Q 014702 181 WAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVD 260 (420)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~~ 260 (420)
........++..++++++...+.+.+++.++++.....+++.+.++++.|+++|+++.+|+.++....+......+
T Consensus 154 --~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~~-- 229 (411)
T cd01298 154 --VEETEEALAEAERLIREWHGAADGRIRVALAPHAPYTCSDELLREVAELAREYGVPLHIHLAETEDEVEESLEKYG-- 229 (411)
T ss_pred --cccHHHHHHHHHHHHHHhcCCCCCceEEEEeCCCCccCCHHHHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHhC--
Confidence 1123445556666777765555667788777777777889999999999999999999999887655444433322
Q ss_pred CChHHHHHHhccCCCccceeeccCCChhhHHHHHhcCCeEEECccchhhc-cCcccHHHHHHcCCcEEEccCCCCCCCCC
Q 014702 261 HGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNRM 339 (420)
Q Consensus 261 ~~~~~~l~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~gv~~~lgsD~~~~~~~~ 339 (420)
....+.+...+.++.+.++.|+.++++++++++++.|+.+++||.++... ...+|++++.++|+++++|||+++.....
T Consensus 230 ~~~~~~~~~~~~~~~~~~i~H~~~l~~~~~~~l~~~gi~~~~~p~~~~~~~~~~~~~~~~~~~Gv~~~~GsD~~~~~~~~ 309 (411)
T cd01298 230 KRPVEYLEELGLLGPDVVLAHCVWLTDEEIELLAETGTGVAHNPASNMKLASGIAPVPEMLEAGVNVGLGTDGAASNNNL 309 (411)
T ss_pred CCHHHHHHHcCCCCCCeEEEEecCCCHHHHHHHHHcCCeEEEChHHhhhhhhCCCCHHHHHHCCCcEEEeCCCCccCCCc
Confidence 23555566677777888899999999999999999999999999987654 45789999999999999999997654556
Q ss_pred CHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEcCCCCCCCCCCCC
Q 014702 340 SIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDR 418 (420)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~~~ 418 (420)
+++.+++.+....+... ....+++++++++++|.|||+++|++ ++|+|++|+.|||||+|.+.++..+.+++
T Consensus 310 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~al~~~T~~~A~~lg~~-~~G~i~~G~~ADlvv~d~~~~~~~~~~~~ 381 (411)
T cd01298 310 DMFEEMRLAALLQKLAH------GDPTALPAEEALEMATIGGAKALGLD-EIGSLEVGKKADLILIDLDGPHLLPVHDP 381 (411)
T ss_pred CHHHHHHHHHHHhcccc------CCCCcCCHHHHHHHHHhhHHHHhCCc-cCCCcCCCccCCEEEEeCCCCccCCccch
Confidence 88888887765543210 11236999999999999999999998 68999999999999999997776665554
No 16
>TIGR02967 guan_deamin guanine deaminase. This model describes guanine deaminase, which hydrolyzes guanine to xanthine and ammonia. Xanthine can then be converted to urate by xanthine dehydrogenase, and urate subsequently degraded. In some bacteria, the guanine deaminase gene is found near the xdhABC genes for xanthine dehydrogenase. Non-homologous forms of guanine deaminase also exist, as well as distantly related forms outside the scope of this model.
Probab=100.00 E-value=1e-45 Score=347.93 Aligned_cols=361 Identities=24% Similarity=0.370 Sum_probs=287.7
Q ss_pred eeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhcccCCCCChHHHhhhccccccC
Q 014702 37 VFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYES 116 (420)
Q Consensus 37 ~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (420)
++++++|+|+||+|++||+..+....++ ...++||++|++|||||||+|+|+.+...++ ....++..|+....|+.+.
T Consensus 3 ~~~~~~V~V~~g~I~~Vg~~~~~~~~~~-~~~~viD~~g~~v~PGlId~H~Hl~~~~~~g-~~~~~~~~~~~~~~~~~~~ 80 (401)
T TIGR02967 3 YFEDGLLVVENGRIVAVGDYAELKETLP-AGVEIDDYRGHLIMPGFIDTHIHYPQTEMIA-SYGEQLLEWLEKYTFPTEA 80 (401)
T ss_pred EEeceEEEEECCEEEEecCcchhhhccC-CCCeEEeCCCCEEecceeecccCchhhhhcc-cCCchHHHHHhhCcCcccc
Confidence 4577899999999999998654322222 2568999999999999999999999887777 5566788999877676655
Q ss_pred CC-ChHHHHHHHHHHHHHHHhCCcceeeeCCccCH---HHHHHHHHHhCCeeEeeehhccCCCCCCcccccCChhHHHHH
Q 014702 117 NM-TEEDSYISTLLCGIELIHSGVTCFAEAGGQHV---SEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQS 192 (420)
Q Consensus 117 ~~-~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (420)
.+ +.+..+..+.....+++++|+||+++++.... ....++..+.|+|.+.+...++.. .+.. .........+.
T Consensus 81 ~~~~~~~~~~~a~~~~~e~l~~GvTtv~d~~~~~~~~~~~~~~a~~~~G~R~~~~~~~~d~~--~~~~-~~~~~~~~~~~ 157 (401)
T TIGR02967 81 RFADPDHAEEVAEFFLDELLRNGTTTALVFATVHPESVDALFEAALKRGMRMIAGKVLMDRN--APDY-LRDTAESSYDE 157 (401)
T ss_pred ccCCHHHHHHHHHHHHHHHHhCCCcEEEeccccCHHHHHHHHHHHHHCCCeEEEeeeeecCC--CCcc-cccCHHHHHHH
Confidence 43 44555666677888999999999999875432 456778889999988776665422 1111 11223444556
Q ss_pred HHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHc-CCccceeccCCcchhHHHHhhcCCCCChHHHHHHhc
Q 014702 193 QKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREF-KTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIE 271 (420)
Q Consensus 193 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~-~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 271 (420)
..++++++.. .+.++..+.++..+..+++.++++.++|+++ |+++++|+.++..+.+...+..+......+.++..+
T Consensus 158 ~~~~i~~~~~--~g~i~~~~~~~~~~~~s~e~l~~~~~~A~~~~g~~v~~H~~e~~~~~~~~~~~~~~~~~~~~~l~~~g 235 (401)
T TIGR02967 158 SKALIERWHG--KGRLLYAVTPRFAPTSSPEQLAAAGELAKEYPDVYVQTHLSENKDEIAWVKELFPEAKDYLDVYDHYG 235 (401)
T ss_pred HHHHHHHHhC--cCCceEEEECCcCCcCcHHHHHHHHHHHHhCCCCeeEEEECCCchHHHHHHHHcCCCCcHHHHHHHCC
Confidence 6666666554 3567777888888889999999999999999 999999999988777777776665556688899999
Q ss_pred cCCCccceeeccCCChhhHHHHHhcCCeEEECccchhhc-cCcccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHH
Q 014702 272 FLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASL 350 (420)
Q Consensus 272 ~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~gv~~~lgsD~~~~~~~~~~~~~~~~~~~ 350 (420)
+++.+.++.|+.++++++++++++.|+.+++||.++... .+..|++++.++|+++++|||+... +..+++++++.+..
T Consensus 236 ~lg~~~~~~H~~~~~~~~~~~l~~~g~~v~~~P~~~~~~~~g~~~~~~~~~~Gv~v~lGtD~~~~-~~~~~~~~~~~~~~ 314 (401)
T TIGR02967 236 LLGRRSVFAHCIHLSDEECQRLAETGAAIAHCPTSNLFLGSGLFNLKKALEHGVRVGLGTDVGGG-TSFSMLQTLREAYK 314 (401)
T ss_pred CCCCCeEEEecccCCHHHHHHHHHcCCeEEEChHHHHHhccCCCCHHHHHHCCCeEEEecCCCCC-CCcCHHHHHHHHHH
Confidence 999999999999999999999999999999999998765 6788999999999999999998642 44588999888766
Q ss_pred HhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEcCCCCCCCC
Q 014702 351 INKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVP 414 (420)
Q Consensus 351 ~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~ 414 (420)
..+.. ..+++++++++++|.|||+++|+++++|+|++||.|||+++|.+.....|
T Consensus 315 ~~~~~---------~~~~~~~~~l~~aT~~~A~~lg~~~~~G~i~~G~~ADlvi~d~~~~~~~~ 369 (401)
T TIGR02967 315 VSQLQ---------GARLSPFEAFYLATLGGARALDLDDRIGNFEPGKEADFVVLDPAATPLLA 369 (401)
T ss_pred Hhhhc---------CCCCCHHHHHHHHHHHHHHHhCCcCCccccCCCCccCEEEEcCCCCcccc
Confidence 65422 13599999999999999999999877899999999999999988655443
No 17
>PRK06151 N-ethylammeline chlorohydrolase; Provisional
Probab=100.00 E-value=9.4e-46 Score=354.46 Aligned_cols=378 Identities=24% Similarity=0.351 Sum_probs=290.6
Q ss_pred eEEEEecEEEeecCCc-eeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhcccC
Q 014702 20 TMILHNAVIVTMDKES-RVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (420)
Q Consensus 20 ~~li~n~~v~~~d~~~-~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~~ 98 (420)
.++|+|++|++.|+.+ .++++++|+|+||+|++|++.... ...++||++|++|||||||+|+|+.+.......
T Consensus 2 ~~li~~~~v~~~d~~~~~~~~~~~VlVe~g~I~~Vg~~~~~------~~~~viD~~g~~vlPGlVdaH~Hl~~~~~~~~~ 75 (488)
T PRK06151 2 RTLIKARWVLGFDDGDHRLLRDGEVVFEGDRILFVGHRFDG------EVDRVIDAGNALVGPGFIDLDALSDLDTTILGL 75 (488)
T ss_pred eEEEEccEEEEEcCCCCeEEeCcEEEEECCEEEEecCCCCC------CCCeEEeCCCCEEecCEEeeecccchhhhhccc
Confidence 6899999999988754 578999999999999999985321 246899999999999999999998754332211
Q ss_pred CCCChHHHhhhccccc-------cCCCChHHHHHHHHHHHHHHHhCCcceeeeCCcc----------CHHHHHHHHHHhC
Q 014702 99 DDVDLMTWLHDRIWPY-------ESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ----------HVSEMAKAVELLG 161 (420)
Q Consensus 99 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~----------~~~~~~~~~~~~g 161 (420)
.+...|..+..|+. ...+++++.+..+.....+++++|+||+++++.. ......++....|
T Consensus 76 --~~~~~~~~~~~~~~~~~~~~~~~~~t~e~~~~~a~~~~~e~L~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~a~~~~G 153 (488)
T PRK06151 76 --DNGPGWAKGRVWSRDYVEAGRREMYTPEELAFQKRYAFAQLLRNGITTAMPIASLFYRQWAETYAEFAAAAEAAGRLG 153 (488)
T ss_pred --ccchhHHhcccCchhhhhcchhhcCCHHHHHHHHHHHHHHHHhcCeeEEehhhhhhccccccccchHHHHHHHHHHcC
Confidence 11225665555543 1356778888888899999999999999986431 1345667788899
Q ss_pred CeeEeeehhccCCCCCC------cccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHc
Q 014702 162 LRACLVQSTMDCGEGLP------ASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREF 235 (420)
Q Consensus 162 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~ 235 (420)
++...+...+..+.+.. ..+........+.+..++++++...+.+.++..+.++..+..+++.+++++++|+++
T Consensus 154 iR~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~i~~~~~p~~~~~~s~e~l~~~~~~A~~~ 233 (488)
T PRK06151 154 LRVYLGPAYRSGGSVLEADGSLEVVFDEARGLAGLEEAIAFIKRVDGAHNGLVRGMLAPDRIETCTVDLLRRTAAAAREL 233 (488)
T ss_pred CeEEecchhccCccccccCCCCCccccchhHHHHHHHHHHHHHHhhcccCCceEEEEcCCCCCCCCHHHHHHHHHHHHHC
Confidence 99888765543221110 001111223345566777777776666788888888888889999999999999999
Q ss_pred CCccceeccCCcchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCCCh---------hhHHHHHhcCCeEEECccc
Q 014702 236 KTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH---------TEIGLLSRAGVKVSHCPAS 306 (420)
Q Consensus 236 ~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~---------~~~~~~~~~~~~~~~~p~~ 306 (420)
|+++++|+.++..+.+...+.. +...++.+...+.++.+.+++|+.++++ ++++++++.|+.+++||.+
T Consensus 234 g~~v~~H~~e~~~~~~~~~~~~--g~~~~~~~~~~g~l~~r~~l~H~~~l~~~~~~~~~~~~~~~~la~~g~~v~~~P~~ 311 (488)
T PRK06151 234 GCPVRLHCAQGVLEVETVRRLH--GTTPLEWLADVGLLGPRLLIPHATYISGSPRLNYSGGDDLALLAEHGVSIVHCPLV 311 (488)
T ss_pred CCcEEEEECCchHHHHHHHHHc--CCCHHHHHHHcCCCCCCcEEEEEEEcCCccccccCCHHHHHHHHhcCCEEEECchh
Confidence 9999999998766555554433 3457788888999999999999999999 9999999999999999988
Q ss_pred hhhc-cCcccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHc
Q 014702 307 AMRM-LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSV 385 (420)
Q Consensus 307 ~~~~-~~~~~~~~~~~~gv~~~lgsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~l 385 (420)
+.+. .+..|++++.+.|+++++|||+.+ .+++..++.+....+... .....++++++++++|.|||+++
T Consensus 312 ~~~~g~~~~p~~~l~~~Gv~v~lGtD~~~----~~~~~~~~~~~~~~~~~~------~~~~~~~~~~al~~aT~~~A~~l 381 (488)
T PRK06151 312 SARHGSALNSFDRYREAGINLALGTDTFP----PDMVMNMRVGLILGRVVE------GDLDAASAADLFDAATLGGARAL 381 (488)
T ss_pred hhhhccccccHHHHHHCCCcEEEECCCCC----ccHHHHHHHHHHHHHHhc------CCCCCCCHHHHHHHHHHHHHHHh
Confidence 7665 667899999999999999999743 378888887765543221 01234899999999999999999
Q ss_pred cCCCcccccccCccccEEEEcCCCCCCCCCCCC
Q 014702 386 LWDNDIGSLEAGKKADMVVVDPFSWPMVPVHDR 418 (420)
Q Consensus 386 gl~~~~G~l~~G~~ADlvv~d~~~~~~~~~~~~ 418 (420)
|+++ +|+|++|+.|||+|+|.+.++..|..||
T Consensus 382 g~~~-~G~I~~G~~ADlvvld~~~~~~~~~~d~ 413 (488)
T PRK06151 382 GRDD-LGRLAPGAKADIVVFDLDGLHMGPVFDP 413 (488)
T ss_pred CCCC-CcccCCCCcCCEEEEeCCccccCCccCH
Confidence 9976 7999999999999999998877665554
No 18
>PRK08418 chlorohydrolase; Provisional
Probab=100.00 E-value=1.1e-45 Score=345.19 Aligned_cols=362 Identities=22% Similarity=0.267 Sum_probs=281.7
Q ss_pred EEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhcccCCC
Q 014702 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (420)
Q Consensus 21 ~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~~~~ 100 (420)
++|+|+.|++++.....+++++|+|+ |+|++||+..+.+..+ ...++||++|++|+|||||+|+|+.++..++...+
T Consensus 2 ~~i~~~~v~t~~~~~~~~~~~~v~v~-~~I~~ig~~~~~~~~~--~~~~vid~~g~~v~PG~Vn~H~H~~~~~~rg~~~~ 78 (408)
T PRK08418 2 KIIGASYIFTCDENFEILEDGAVVFD-DKILEIGDYENLKKKY--PNAKIQFFKNSVLLPAFINPHTHLEFSANKTTLDY 78 (408)
T ss_pred EEEEccEEEecCCCCceeeccEEEEC-CEEEEecCHHHHHhhC--CCCcEEecCCcEEccCccccccchhhhhhccccCC
Confidence 57899999987755567899999999 9999999864433211 23468999999999999999999999988887777
Q ss_pred CChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCccCHHHHHHHHHHhCCeeEeeehhccCCCCCCcc
Q 014702 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPAS 180 (420)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 180 (420)
.++.+|+...+++.+ .+.++..+........+++++|+||+.++... ....++..+.|+|..+........ ..
T Consensus 79 ~~~~~wl~~~~~~~~-~l~~~~~~~~~~~~~~E~l~~GtTtv~d~~~~--~~~~~a~~~~GiR~~~~~~~~~~~----~~ 151 (408)
T PRK08418 79 GDFIPWLGSVINHRE-DLLEKCKGALIQQAINEMLKSGVGTIGAISSF--GIDLEICAKSPLRVVFFNEILGSN----AS 151 (408)
T ss_pred CchHHHHHHHhhhhh-hcCHHHHHHHHHHHHHHHHhcCceEEEEeecc--hhhHHHHHhcCCeEEEEeeeeCCC----cc
Confidence 788899988776654 35555666666778899999999999987643 233678889999997754433211 11
Q ss_pred cccCChhHHHHHHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCC-
Q 014702 181 WAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKV- 259 (420)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~- 259 (420)
.. ........+.++.......+.+...++++..+.++++.++++.++|+++++++++|+.++..+.+......+.
T Consensus 152 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~aph~~~t~s~e~l~~~~~~A~~~~~~i~~H~~E~~~E~~~~~~~~G~~ 227 (408)
T PRK08418 152 AV----DELYQDFLARFEESKKFKSKKFIPAIAIHSPYSVHPILAKKALQLAKKENLLVSTHFLESKAEREWLEESKGWF 227 (408)
T ss_pred ch----hhhHHHHHHHHHhhhcccCCceeEEEeCCCCCCCCHHHHHHHHHHHHHcCCeEEEEecCCHHHHHHHHhccCch
Confidence 10 0111111112222212233578888999999999999999999999999999999999999887777665441
Q ss_pred -------------CCChHHHHHHhccCCCccceeeccCCChhhHHHHHhcCCeEEECccchhhc-cCcccHHHHHHcCCc
Q 014702 260 -------------DHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADIC 325 (420)
Q Consensus 260 -------------~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~gv~ 325 (420)
...++++++.++ ..+.++.|+.++++++++++++.|+.+++||.++++. .+.+|++++++.|++
T Consensus 228 ~~~~~~~~~~~~~~~~pv~~l~~~g--~~~~~~~H~~~~~~~di~~la~~g~~v~~cP~sn~~lg~g~~p~~~~~~~Gi~ 305 (408)
T PRK08418 228 KKFFEKFLKEPKPLYTPKEFLELFK--GLRTLFTHCVYASEEELEKIKSKNASITHCPFSNRLLSNKALDLEKAKKAGIN 305 (408)
T ss_pred hhhhhhhcccccccCCHHHHHHHhC--CCCeEEEecccCCHHHHHHHHHcCCcEEECHhHHHHhcCCCccHHHHHhCCCe
Confidence 124667777665 4578899999999999999999999999999999877 678999999999999
Q ss_pred EEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEE
Q 014702 326 VSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVV 405 (420)
Q Consensus 326 ~~lgsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~ 405 (420)
+++|||+..+++..+++++++.+....+.. ....+.+++++++|.|+|+++|++ .|+|++||.||||++
T Consensus 306 v~lGtD~~~~~~~~~~~~em~~~~~~~~~~---------~~~~~~~~~l~~aT~~gA~alg~~--~G~l~~G~~ADlv~~ 374 (408)
T PRK08418 306 YSIATDGLSSNISLSLLDELRAALLTHANM---------PLLELAKILLLSATRYGAKALGLN--NGEIKEGKDADLSVF 374 (408)
T ss_pred EEEeCCCCCCCCCcCHHHHHHHHHHHhccC---------CccccHHHHHHHHHHHHHHHhCCC--CccccCCCccCEEEE
Confidence 999999877777889999999887654421 011357899999999999999995 599999999999999
Q ss_pred cCCC
Q 014702 406 DPFS 409 (420)
Q Consensus 406 d~~~ 409 (420)
|.+.
T Consensus 375 d~~~ 378 (408)
T PRK08418 375 ELPE 378 (408)
T ss_pred eCCC
Confidence 9873
No 19
>cd01313 Met_dep_hydrolase_E Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=100.00 E-value=4.9e-45 Score=343.07 Aligned_cols=360 Identities=22% Similarity=0.283 Sum_probs=278.2
Q ss_pred eeeeceeE-EEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhcccCC-----CCChHHHhhh
Q 014702 36 RVFRNGGV-FVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD-----DVDLMTWLHD 109 (420)
Q Consensus 36 ~~~~~~~I-~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~~~-----~~~~~~~~~~ 109 (420)
++.++++| +|+||+|++||+.. ..++||++|++|+|||||+|+|+.++.++|... ...+.+|+.
T Consensus 6 ~~~~~~~i~~v~~g~I~~Vg~~~---------~~~~iD~~g~lv~PGfVn~H~Hl~~~~~rg~~~~~~~~~~~l~~w~~- 75 (418)
T cd01313 6 GWERNVRIEVDADGRIAAVNPDT---------ATEAVALLGGALLPGMPNLHSHAFQRAMAGLTEYRGSAADSFWTWRE- 75 (418)
T ss_pred ceecCeEEEEeCCCeEEEecCCC---------CCcccccCCCeeccCccccCccHHHHHhcccccccCCCCCChhhHHH-
Confidence 46678999 99999999999852 235799999999999999999999999988654 456778884
Q ss_pred ccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCcc--------------CHHHHHHHHHHhCCeeEeeehhccCCC
Q 014702 110 RIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--------------HVSEMAKAVELLGLRACLVQSTMDCGE 175 (420)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~--------------~~~~~~~~~~~~g~~~~~~~~~~~~~~ 175 (420)
..++....+++++.+..+.....+++++|+||+.++... ..+...++..+.|+|..++...++...
T Consensus 76 ~~~~~~~~~t~e~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~GiR~~~~~~~~~~~~ 155 (418)
T cd01313 76 LMYRFAARLTPEQIEAIARQLYIEMLLAGITAVGEFHYVHHDPDGTPYADPAELAQRVIAAASDAGIGITLLPVLYARAG 155 (418)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHhCCCEEEEeeeeccCCCCCccCChhhhHHHHHHHHHHhCCeEEeeeeEEeccC
Confidence 456667778899999999999999999999999986421 124567888999999987765554321
Q ss_pred CC-Cccc-----ccCChhHHHHHHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHcCCccceeccCCcch
Q 014702 176 GL-PASW-----AVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYE 249 (420)
Q Consensus 176 ~~-~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~ 249 (420)
.. +... .........+...+.++.+. ..+.+...+.++.....+++.++.+.+++++ |+++++|+.++..+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~p~~~~~~s~e~l~~~~~~a~~-g~~i~~H~~e~~~e 232 (418)
T cd01313 156 FGGPAPNPGQRRFINGYEDFLGLLEKALRAVK--EHAAARIGVAPHSLRAVPAEQLAALAALASE-KAPVHIHLAEQPKE 232 (418)
T ss_pred CCCCCCchhhhhhcccHHHHHHHHHHHhhhhc--cCCceEEEEccCCCCCCCHHHHHHHHHHHhc-CCceEEEeCCCHHH
Confidence 11 1000 00011222222233333332 2356777788888888999999999999999 99999999887765
Q ss_pred hHHHHhhcCCCCChHHHHHHhccCCCccceeeccCCChhhHHHHHhcCCeEEECccchhhc-cCcccHHHHHHcCCcEEE
Q 014702 250 NQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSL 328 (420)
Q Consensus 250 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~gv~~~l 328 (420)
.....+.. +..+++.+...+.++.+.++.||.++++++++++++.|+.+++||.++... .+.+|+++++++|+++++
T Consensus 233 ~~~~~~~~--g~~~i~~l~~~g~l~~~~~~~H~~~l~~~~~~~la~~g~~v~~~P~sn~~lg~g~~p~~~l~~~Gv~v~l 310 (418)
T cd01313 233 VDDCLAAH--GRRPVELLLDHGHLDARWCLVHATHLTDNETLLLGRSGAVVGLCPTTEANLGDGIFPAAALLAAGGRIGI 310 (418)
T ss_pred HHHHHHHc--CCCHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHcCCEEEECCCchhhccCCCCCHHHHHHCCCcEEE
Confidence 55554443 345788899999999999999999999999999999999999999998776 678999999999999999
Q ss_pred ccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEcCC
Q 014702 329 GTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPF 408 (420)
Q Consensus 329 gsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~ 408 (420)
|||+.. ..+++.+++.+...++........+.....++.+++++++|.|+|+++|++ +|+|++||.|||||+|.+
T Consensus 311 GtD~~~---~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~gA~alg~~--~Gsle~Gk~ADlvvld~~ 385 (418)
T cd01313 311 GSDSNA---RIDLLEELRQLEYSQRLRDRARNVLATAGGSSARALLDAALAGGAQALGLA--TGALEAGARADLLSLDLD 385 (418)
T ss_pred ecCCCC---CcCHHHHHHHHHHHHHHHhcccccccccCCCCHHHHHHHHHHHHHHHhCCC--CCeECCCCccCEEEEcCC
Confidence 999753 357899888876654422111111122357999999999999999999996 799999999999999999
Q ss_pred CCCCCCC
Q 014702 409 SWPMVPV 415 (420)
Q Consensus 409 ~~~~~~~ 415 (420)
.++..|.
T Consensus 386 ~~~~~p~ 392 (418)
T cd01313 386 HPSLAGA 392 (418)
T ss_pred CccccCC
Confidence 7776664
No 20
>cd01312 Met_dep_hydrolase_D Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=100.00 E-value=3.9e-44 Score=331.51 Aligned_cols=339 Identities=21% Similarity=0.274 Sum_probs=273.4
Q ss_pred CEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhcccCCCCChHHHhhhccccccCCCChHHHHHHH
Q 014702 48 DRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYIST 127 (420)
Q Consensus 48 G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (420)
|+|++||+..+....+ ...+++|++|++|+|||||+|+|+.++.+++...+.++.+|+...+ +....+.+++.+..+
T Consensus 1 ~~I~aVG~~~~~~~~~--~~~~v~d~~g~~v~PGlVnaH~H~~~~~~rg~~~~~~~~~wl~~~~-~~~~~~~~e~~~~~a 77 (381)
T cd01312 1 DKILEVGDYEKLEKRY--PGAKHEFFPNGVLLPGLINAHTHLEFSANVAQFTYGRFRAWLLSVI-NSRDELLKQPWEEAI 77 (381)
T ss_pred CeEEEECChHHHHhhc--CCCeEEecCCcEEecCccccccccchhccccccCCCchHHHHHHHH-HHHHhcChHHHHHHH
Confidence 6999999866543322 2568999999999999999999999999998777788899997654 445567777888888
Q ss_pred HHHHHHHHhCCcceeeeCCccCHHHHHHHHHHhCCeeEeeehhccCCCCCCcccccCChhHHHHHHHHHHHHhcCCCCCc
Q 014702 128 LLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGR 207 (420)
Q Consensus 128 ~~~~~~~~~~Gvtt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (420)
.....+++++||||+.++... .+..++..+.|+|..+++..++..+ ..+ .....+..+.+.++.....+.
T Consensus 78 ~~~~~E~l~~G~Tt~~d~~~~--~~~~~a~~~~GiR~~~~~~~~~~~~---~~~-----~~~~~~~~~~~~~~~~~~~~~ 147 (381)
T cd01312 78 RQGIRQMLESGTTSIGAISSD--GSLLPALASSGLRGVFFNEVIGSNP---SAI-----DFKGETFLERFKRSKSFESQL 147 (381)
T ss_pred HHHHHHHHHhCCeEEEEecCC--HHHHHHHHHcCCcEEEEEeeECCCC---chh-----hhhHHHHHHHHHHhhccCccc
Confidence 889999999999999998743 3477888899999988877764321 111 111112222233322223567
Q ss_pred eEEEEeeccccccCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcC----------------CCCChHHHHHHhc
Q 014702 208 IRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRK----------------VDHGTVTFLDKIE 271 (420)
Q Consensus 208 i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~----------------~~~~~~~~l~~~~ 271 (420)
+...++++..+..+++.++.+.++|+++++++++|+.|+..+.+.....++ .+..+++.++..+
T Consensus 148 v~~~~~p~a~~~~s~e~l~~~~~lA~~~g~~i~~Hl~E~~~e~~~~~~~~g~~~~~~~~~~~~~~~~~g~~pv~~l~~~g 227 (381)
T cd01312 148 FIPAISPHAPYSVHPELAQDLIDLAKKLNLPLSTHFLESKEEREWLEESKGWFKHFWESFLKLPKPKKLATAIDFLDMLG 227 (381)
T ss_pred eEEEECCCCCcccCHHHHHHHHHHHHHcCCeEEEEecCcHHHHHHHHHhccchhhHhhhhcccccccCCCCHHHHHHHcC
Confidence 888899999999999999999999999999999999999887776654331 1456788999999
Q ss_pred cCCCccceeeccCCChhhHHHHHhcCCeEEECccchhhc-cCcccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHH
Q 014702 272 FLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASL 350 (420)
Q Consensus 272 ~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~gv~~~lgsD~~~~~~~~~~~~~~~~~~~ 350 (420)
.++.+.++.|+.++++++++++++.|+.+++||.++... .+..|++++++.|+++++|||+...++..+++.+++.+..
T Consensus 228 ~L~~~~~~~H~~~l~~~~~~~l~~~g~~v~~~P~sn~~lg~g~~p~~~~~~~Gv~v~lGtD~~~~~~~~d~~~~~~~~~~ 307 (381)
T cd01312 228 GLGTRVSFVHCVYANLEEAEILASRGASIALCPRSNRLLNGGKLDVSELKKAGIPVSLGTDGLSSNISLSLLDELRALLD 307 (381)
T ss_pred CCCCCcEEEECCcCCHHHHHHHHHcCCeEEECcchhhhhcCCCcCHHHHHHCCCcEEEeCCCCccCCCCCHHHHHHHHHH
Confidence 999999999999999999999999999999999998766 5678999999999999999998776667799999998876
Q ss_pred HhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEcCCCC
Q 014702 351 INKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSW 410 (420)
Q Consensus 351 ~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~ 410 (420)
..+... ..++..++++++|.|+|+++|++ .|+|++||.||||++|.+.+
T Consensus 308 ~~~~~~---------~~~~~~~~l~~aT~~gA~alg~~--~Gsle~Gk~ADlvv~d~~~~ 356 (381)
T cd01312 308 LHPEED---------LLELASELLLMATLGGARALGLN--NGEIEAGKRADFAVFELPGP 356 (381)
T ss_pred hccccc---------ccCCHHHHHHHHHHHHHHHhCCC--CCccCCCCcccEEEEeCCCc
Confidence 544211 12678999999999999999995 79999999999999998854
No 21
>COG0402 SsnA Cytosine deaminase and related metal-dependent hydrolases [Nucleotide transport and metabolism / General function prediction only]
Probab=100.00 E-value=3.1e-44 Score=338.30 Aligned_cols=376 Identities=34% Similarity=0.543 Sum_probs=311.5
Q ss_pred ceEEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhcccC
Q 014702 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (420)
Q Consensus 19 ~~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~~ 98 (420)
..++|+|..+++.|+... ++.+++.|+||+|+.|++....+ .+.++||++|++|+|||||+|+|+.++.+++..
T Consensus 2 ~~~~i~~~~~~~~d~~~~-~~~~~~~i~~g~I~~ig~~~~~~-----~~~~~iD~~~~lv~Pgfvn~H~H~~~t~~~g~~ 75 (421)
T COG0402 2 TMLLIRGDLLLTNDPEGR-IEDGDLVIEDGKIVAIGANAEGP-----PDEEVIDAKGKLVLPGFVNAHTHLDQTLLRGLA 75 (421)
T ss_pred cceeeeCcEEeecCcccc-eeeeeEEEcCCEEEEeCCcCCCC-----CCceeecCCCCEeccCccccccchHHHHHhhhh
Confidence 357888999998766544 67889999999999999976532 367899999999999999999999999999988
Q ss_pred CCCChHHHhhhccccccCC-CChHHHHHHHHHHHHHHHhCCcceeeeCCcc---CHHHHHHHHHHhCCeeEeeehhccCC
Q 014702 99 DDVDLMTWLHDRIWPYESN-MTEEDSYISTLLCGIELIHSGVTCFAEAGGQ---HVSEMAKAVELLGLRACLVQSTMDCG 174 (420)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~ 174 (420)
.+.++..|+....|+.+.. ..+++.+..+...+.+++++|+|++...... ......+++.+.|++...+..+++.+
T Consensus 76 ~~~~l~~wl~~~~~~~~~~~~~~e~~~~~a~~~~~e~l~~G~t~~~~~~~~~~~~~~~~~~a~~~~g~r~~~~~~~~~~~ 155 (421)
T COG0402 76 DDLPLLEWLERYVWPREARLLTEEDLYARALLALLEMLRNGTTTARTHVDVVAESADAAFEAALEVGLRAVLGPVLQDVA 155 (421)
T ss_pred cccchHHHHHHHHhHHHhhcCCHHHHHHHHHHHHHHHHhcCccccccccchhhhhHHHHHHHHHHhCCeeEeeeccccCC
Confidence 8888999999999988887 5666888888899999999999996665432 23446789999999999998888765
Q ss_pred CCCCcccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHcCCccceeccCCcchhHHHH
Q 014702 175 EGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVM 254 (420)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~ 254 (420)
++..... .... +++..++++++...+ .+.+...++..+..+++.++.+.++++++++++++|+.|+..+.+...
T Consensus 156 ~p~~~~~---~~~~-~~~~~~~~~~~~~~~--~~~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~v~iH~~E~~~e~~~~~ 229 (421)
T COG0402 156 FPDPGAE---TDEE-LEETEELLREAHGLG--RDVVGLAPHFPYTVSPELLESLDELARKYGLPVHIHLAETLDEVERVL 229 (421)
T ss_pred CCccccc---chHH-HHHHHHHHHHHhcCC--CeeEEEecCCCCCCCHHHHHHHHHHHhcCCCceEEEecCcHHHHHHHH
Confidence 3322211 1111 455678888887765 677778899999999999999999999999999999999999888887
Q ss_pred hhcCCCCChHHHHHHhccCCCccceeeccCCChhhHHHHHhcCCeEEECccchhhc-cCcccHHHHHHcCCcEEEccCCC
Q 014702 255 DTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGA 333 (420)
Q Consensus 255 ~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~gv~~~lgsD~~ 333 (420)
.. .+..+.+.++..+++..+.++.|+.++++++++++++.|+.+++||.+|+++ .+..|++++.+.|+++++|||..
T Consensus 230 ~~--~g~~~~~~~~~~g~l~~~~~~~H~~~~~~~e~~~l~~~g~~v~~cP~sN~~L~sG~~p~~~~~~~gv~v~~gTD~~ 307 (421)
T COG0402 230 EP--YGARPVERLDLLGLLGSHTLLAHCVHLSEEELELLAESGASVVHCPRSNLKLGSGIAPVRRLLERGVNVALGTDGA 307 (421)
T ss_pred hh--cCCCHHHHHHHcCCCCCCeEEEEeccCCHHHHHHHhhCCCeEEECcchhccccCCCCCHHHHHHcCCCEEEecCCc
Confidence 73 3456888899999999999999999999999999999999999999999888 66899999999999999999998
Q ss_pred CCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEcCCCCCCC
Q 014702 334 PSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMV 413 (420)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~ 413 (420)
.+++..++|.++..+.++++...... ...... ++++++|.|+|++||+ +++|+|++|+.|||||+|.+.....
T Consensus 308 ~~~~~~d~l~~~~~a~~l~~~~~~~~-----~~~~~~-~~l~~aT~~gA~alg~-~~~G~le~G~~ADlvvld~~~~~~~ 380 (421)
T COG0402 308 ASNNVLDMLREMRTADLLQKLAGGLL-----AAQLPG-EALDMATLGGAKALGL-DDIGSLEVGKKADLVVLDASAPHLA 380 (421)
T ss_pred cccChHHHHHHHHHHHHHHHhhcCCC-----cccchH-HHHHHHHhhHHHHcCC-cccCCcccccccCEEEEcCCCCccc
Confidence 88777899999999988877543111 111222 3999999999999998 5689999999999999999965444
Q ss_pred CC
Q 014702 414 PV 415 (420)
Q Consensus 414 ~~ 415 (420)
+.
T Consensus 381 ~~ 382 (421)
T COG0402 381 PL 382 (421)
T ss_pred cc
Confidence 43
No 22
>PRK09229 N-formimino-L-glutamate deiminase; Validated
Probab=100.00 E-value=1.9e-43 Score=336.36 Aligned_cols=370 Identities=20% Similarity=0.236 Sum_probs=279.8
Q ss_pred eEEEEecEEEeecCCceeeeceeEEEEC-CEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhcccC
Q 014702 20 TMILHNAVIVTMDKESRVFRNGGVFVVQ-DRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (420)
Q Consensus 20 ~~li~n~~v~~~d~~~~~~~~~~I~I~~-G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~~ 98 (420)
.++++++.+. ++ +.++++|+|+| |+|++||+.... ..++.+|++|||||||+|+|+.+..++|..
T Consensus 4 ~~~~~~~~~~--~~---~~~~~~v~i~~~grI~~vg~~~~~---------~~~~~~g~~vlPGlVn~H~H~~~~~~rg~~ 69 (456)
T PRK09229 4 TLFAERALLP--DG---WARNVRLTVDADGRIAAVEPGAAP---------AGAERLAGPVLPGMPNLHSHAFQRAMAGLT 69 (456)
T ss_pred hHHHHHhhCC--Cc---cccCcEEEEecCCeEEEecCCCCC---------ccccccCcEEccCcccccccHhhHhhcCcc
Confidence 3445555553 43 66888999999 999999985321 123458999999999999999999999876
Q ss_pred CC-----CChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCcc--------------CHHHHHHHHHH
Q 014702 99 DD-----VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--------------HVSEMAKAVEL 159 (420)
Q Consensus 99 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~--------------~~~~~~~~~~~ 159 (420)
.+ .++.+|+. .+|+....+++++.+..+.....+++++|+||+.++... ..+...++..+
T Consensus 70 ~~~~~~~~~l~~w~~-~~~~~~~~~~~e~~~~~a~~~~~e~L~~G~Ttv~d~~~~~~~~~~~~~~~~~~~~~a~~~a~~e 148 (456)
T PRK09229 70 EVRGPPQDSFWSWRE-LMYRFALRLTPDQLEAIARQLYVEMLEAGYTSVGEFHYLHHDPDGTPYADPAEMALRIVAAARA 148 (456)
T ss_pred cccCCCCCChHHHHH-HHHHHHHhCCHHHHHHHHHHHHHHHHhhCCcEEEeeeeeccCCCCCccCChHHHHHHHHHHHHH
Confidence 42 55678875 457766778888989999999999999999999886421 12567888999
Q ss_pred hCCeeEeeehhccCC-C-CCCcc----cccCChhHHHHHHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHH
Q 014702 160 LGLRACLVQSTMDCG-E-GLPAS----WAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAR 233 (420)
Q Consensus 160 ~g~~~~~~~~~~~~~-~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~ 233 (420)
.|+|..++...++.. . +.+.. ...............+.+.+. ..+.+.+.+.++..+.++++.++++.+++
T Consensus 149 ~GiR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~p~~~~~~s~e~l~~~~~~A- 225 (456)
T PRK09229 149 AGIGLTLLPVLYAHSGFGGQPPNPGQRRFINDPDGFLRLLEALRRALA--ALPGARLGLAPHSLRAVTPDQLAAVLALA- 225 (456)
T ss_pred cCCEEEeceeeeecCCCCCCCCchhhcccccCHHHHHHHHHHHHHhhc--CCCceEEEEeCCCCCCCCHHHHHHHHHHh-
Confidence 999988876555432 1 11211 011122223333333333332 23678888888988899999999999999
Q ss_pred HcCCccceeccCCcchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCCChhhHHHHHhcCCeEEECccchhhc-cC
Q 014702 234 EFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LG 312 (420)
Q Consensus 234 ~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~ 312 (420)
++|+++++|+.++..+.....+.. +..+.+.+...+.++.+.++.||.++++++++++++.|+.+++||.+++.. .+
T Consensus 226 ~~g~~i~~H~~e~~~e~~~~~~~~--g~~~~~~l~~~g~l~~~~~l~H~~~l~~~d~~~la~~g~~v~~~P~sn~~lg~g 303 (456)
T PRK09229 226 APDGPVHIHIAEQTKEVDDCLAWS--GARPVEWLLDHAPVDARWCLVHATHLTDAETARLARSGAVAGLCPTTEANLGDG 303 (456)
T ss_pred cCCCceEEEeCCCHHHHHHHHHHc--CCCHHHHHHHcCCCCCCeEEEeeccCCHHHHHHHHHcCCeEEECchhhhhhcCC
Confidence 999999999988776655555543 345778888899999999999999999999999999999999999998766 67
Q ss_pred cccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCC-CCCCHHHHHHHHhHHHHHHccCCCcc
Q 014702 313 FAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDP-AALPAETVLRMATINGAKSVLWDNDI 391 (420)
Q Consensus 313 ~~~~~~~~~~gv~~~lgsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ls~~~al~~~T~~~A~~lgl~~~~ 391 (420)
..|++++++.|+++++|||+.. ..+++.+++.+...++............ +.++..++++++|.|+|+++|+ + +
T Consensus 304 ~~p~~~l~~~Gv~v~lGtD~~~---~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aT~~gA~alg~-~-~ 378 (456)
T PRK09229 304 IFPAVDYLAAGGRFGIGSDSHV---SIDLVEELRLLEYGQRLRDRRRNVLAAAAQPSVGRRLFDAALAGGAQALGR-A-I 378 (456)
T ss_pred CCCHHHHHHCCCeEEEecCCCC---CCCHHHHHHHHHHHHHHhhcCCcccccccccchHHHHHHHHHHHHHHHhCC-C-c
Confidence 8999999999999999999753 3589999998876554321111111111 4689999999999999999999 4 7
Q ss_pred cccccCccccEEEEcCCCCCCCC
Q 014702 392 GSLEAGKKADMVVVDPFSWPMVP 414 (420)
Q Consensus 392 G~l~~G~~ADlvv~d~~~~~~~~ 414 (420)
|+|++||.|||||+|.+.+...|
T Consensus 379 GsLe~Gk~ADlvvld~~~~~~~~ 401 (456)
T PRK09229 379 GGLAVGARADLVVLDLDHPALAG 401 (456)
T ss_pred CCcCCCCccCEEEEeCCCccccC
Confidence 99999999999999988754443
No 23
>KOG3968 consensus Atrazine chlorohydrolase/guanine deaminase [Nucleotide transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.9e-43 Score=308.39 Aligned_cols=368 Identities=27% Similarity=0.358 Sum_probs=302.5
Q ss_pred CceeeeceeEEEEC-CEEEEEcCChhhhhhhcc-----CCCcEEeCCCcEEeecccccccc-cchhhhcccCCCCChHHH
Q 014702 34 ESRVFRNGGVFVVQ-DRIKAIGQSADILQQFSQ-----MADQIIDLQSQILLPGFVNTHVH-TSQQLAKGIADDVDLMTW 106 (420)
Q Consensus 34 ~~~~~~~~~I~I~~-G~I~~vg~~~~~~~~~~~-----~~~~~iD~~g~~v~PGfID~H~H-~~~~~~~~~~~~~~~~~~ 106 (420)
+..+.+++.+.|.| |||+.|++....++++.+ ...+.++..|.++||||||+|+| ..+.++.+.+.+.+..+|
T Consensus 21 ~l~i~e~~sl~Vd~~GKi~~i~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~mPGfVdtH~H~a~q~~~s~~g~d~pll~w 100 (439)
T KOG3968|consen 21 ELEILEGSSLGVDDTGKIVFIGKAYFDENKLKGEGVEKENTKIKLSSGHFLMPGFVDTHIHPAHQFAMSGAGTDMPLLQW 100 (439)
T ss_pred ceEEecCcceeecCCccEEEeeccccchhhhcccccccccceeeecCCcEEecceeecccchHhhhhhhccccCcHHHHH
Confidence 56777888889998 999999997654422221 24578999999999999999999 666677777789999999
Q ss_pred hhhccccccCCCCh-HHHHHHHHHHHHHHHhCCcceeeeCCccCHH---HHHHHHHHhCCeeEeeehhccCCCCCCcccc
Q 014702 107 LHDRIWPYESNMTE-EDSYISTLLCGIELIHSGVTCFAEAGGQHVS---EMAKAVELLGLRACLVQSTMDCGEGLPASWA 182 (420)
Q Consensus 107 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Gvtt~~~~~~~~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 182 (420)
+.++.|+.+..+.. ++.+.......++++++|+||+.-+.+...+ -+++++...|+|+.++...++.+.. +....
T Consensus 101 l~~~~f~le~~~~~~e~~~q~~~~vv~~mL~~GTTt~~~f~~~~~~s~~ll~~~~~~~G~R~~igkv~m~~~~~-~~p~~ 179 (439)
T KOG3968|consen 101 LGKYTFPLEATFTNEEDARQVYQRVVKEMLRAGTTTVEYFSTLHLDSELLLARAAIRAGQRALIGKVCMDCNAH-AVPKG 179 (439)
T ss_pred hhcceeecchhhhhHHHHHHHHHHHHHHHHHcCceehhhhhccCchhHHHHHHHHHHhCCceeeeeehhccCCC-CCCcc
Confidence 99999999999988 5555555568899999999999876654433 4578888999999999999988742 33444
Q ss_pred cCChhHHHHHHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCC
Q 014702 183 VRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHG 262 (420)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~ 262 (420)
.......+....+++.++.......+...+.+.....++...+++..++++..+++++.|..++..+.+.+.++++-...
T Consensus 180 ~~~~E~si~~t~~~i~~~~~~~~~~~~~~vt~~fa~~c~k~v~~~l~~lak~~~l~~q~hIsen~~EI~~~~~ff~~~~~ 259 (439)
T KOG3968|consen 180 VETTEESIESTEDLIPKLEKLKREKVNPIVTPRFAASCSKGVFEELSKLAKYHNLHIQIHISENGKEIEAVKNFFPEKLS 259 (439)
T ss_pred chhHHHHHHHHHHHHHHHHhhccCCCCCcccccccCCCcchhHHHHHHHHHhhhhhhhhhhhhcHHHHHHHHHhhhhccc
Confidence 44566677777777777666655555555566666677888888888999999999999999999999999999988888
Q ss_pred hHHHHHHhccCCCccceeeccCCChhhHHHHHhcCCeEEECccchhhc-cCcccHHHHHHcCCcEEEccCCCCCCCCCCH
Q 014702 263 TVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNRMSI 341 (420)
Q Consensus 263 ~~~~l~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~gv~~~lgsD~~~~~~~~~~ 341 (420)
+...++..+.++.+.+++|+.++++++++.++++|..+.+||.++..+ .+.++++++++.|+.+.+|||.+++ ++
T Consensus 260 y~~~yd~~~lL~~ktvlaH~~hl~d~ei~~l~k~g~svshCP~Sn~~L~sG~~~vr~lL~~~v~VgLGtDv~~~----s~ 335 (439)
T KOG3968|consen 260 YTDVYDKGGLLTEKTVLAHLEHLSDEEIELLAKRGCSVSHCPTSNSILGSGIPRVRELLDIGVIVGLGTDVSGC----SI 335 (439)
T ss_pred chHHHHHhcccchHhHhhhheecCchhHHHHHhcCCceEECCcchhhhccCCccHHHHHhcCceEeecCCcccc----cc
Confidence 888999999999999999999999999999999999999999999777 8899999999999999999998764 45
Q ss_pred HHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEcCCCC
Q 014702 342 VDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSW 410 (420)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~ 410 (420)
...++.+..+.+...... ...+||.++++.+||.|+|+++|+++..|++++||++|++++|.+.+
T Consensus 336 l~a~r~A~~~s~hL~~~~----~~~~Ls~~e~L~lATi~GA~aLg~d~~~Gs~eVGK~fDai~id~s~~ 400 (439)
T KOG3968|consen 336 LNALRQAMPMSMHLACVL----DVMKLSMEEALYLATIGGAKALGRDDTHGSLEVGKYFDAIIIDLSAP 400 (439)
T ss_pred HHHHHHHHHHHHHHHhcc----CcccCCHHHHHHHHhccchhhccCCCcccceecccccceEEEeCCCC
Confidence 555665555443211111 23579999999999999999999999999999999999999999865
No 24
>TIGR02022 hutF formiminoglutamate deiminase. In some species, histidine utilization goes via urocanate to glutamate in four step, the last being removal of formamide. This model describes an alternate fourth step, formiminoglutamate hydrolase, which leads to N-formyl-L-glutamate. This product may be acted on by formylglutamate amidohydrolase (TIGR02017) and bypass glutamate as a product during its degradation. Alternatively, removal of formate (by EC 3.5.1.68) would yield glutamate.
Probab=100.00 E-value=2.9e-42 Score=327.23 Aligned_cols=368 Identities=19% Similarity=0.229 Sum_probs=276.8
Q ss_pred EEecEEEeecCCceeeeceeEEEE-CCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhcccCC--
Q 014702 23 LHNAVIVTMDKESRVFRNGGVFVV-QDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD-- 99 (420)
Q Consensus 23 i~n~~v~~~d~~~~~~~~~~I~I~-~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~~~-- 99 (420)
++|+.+- ++ +.++.+|+|+ ||+|++||+....+ .. .+..|++|||||||+|+|+.++.++|...
T Consensus 6 ~~~~~~~--~~---~~~~~~i~I~~~g~I~~vg~~~~~~-----~~---~~~~g~lvlPGfVn~H~H~~~~~~rg~~~~~ 72 (455)
T TIGR02022 6 AERALLP--DG---WAEGVRIAVAADGRILAIETGVPAA-----PG---AERLSGPLLPGLANLHSHAFQRAMAGLAEVA 72 (455)
T ss_pred HHhccCC--Cc---cccCceEEEecCCEEEEecCCCCcc-----cc---cccCCCEEccCCcccCcchhhHhhcCCcccc
Confidence 4555553 32 5577899999 99999999854210 12 23468899999999999999999998753
Q ss_pred ---CCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCcc--------------CHHHHHHHHHHhCC
Q 014702 100 ---DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--------------HVSEMAKAVELLGL 162 (420)
Q Consensus 100 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~--------------~~~~~~~~~~~~g~ 162 (420)
+.++..|+. ..|+....+++++.+........+++++|+||+.++... .....+++..+.|+
T Consensus 73 ~~~~~~l~~w~~-~~~~~~~~~t~e~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~~~~~~~~a~~~a~~e~G~ 151 (455)
T TIGR02022 73 GSGGDSFWTWRE-LMYRFVDRLTPEQLQAIARQLYVEMLEAGFTRVGEFHYLHHAPDGTPYADPAEMAERIAAAAADAGI 151 (455)
T ss_pred cCCCCCHHHHHH-HHHHHHHhCCHHHHHHHHHHHHHHHHHhCCCEEEeeeeecccCCCccccchhhhHHHHHHHHHHhCC
Confidence 246778975 567777778999999999999999999999999985311 13567888899999
Q ss_pred eeEeeehhccCCC--CCCcc----cccCChhHHHHHHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHcC
Q 014702 163 RACLVQSTMDCGE--GLPAS----WAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFK 236 (420)
Q Consensus 163 ~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~ 236 (420)
|..++..+++... +.+.. ...............+.+.+.. .+.+...+.++..+.++++.++++.+ +++++
T Consensus 152 R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~p~~~~~~s~e~l~~~~~-a~~~g 228 (455)
T TIGR02022 152 GLTLLPVFYAHSGFGGAAPNPGQRRFIHDVERFARLVEVLRRELAA--QPAAVLGLAPHSLRAVTPEQLAAVLQ-ASDRQ 228 (455)
T ss_pred eEEeeeeeeecCCCCCCCCcccchhhccCHHHHHHHHHHHHHHhcc--CCceEEEEecCCCCcCCHHHHHHHHH-HHhCC
Confidence 9987765543211 11111 0111122233223333332322 24567778888888899999999999 88999
Q ss_pred CccceeccCCcchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCCChhhHHHHHhcCCeEEECccchhhc-cCccc
Q 014702 237 TGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAP 315 (420)
Q Consensus 237 ~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~ 315 (420)
+++++|+.+...+.+...+..+ ..+++.+...+.++.+.++.|+.++++++++++++.|+.+++||.+++.+ .+.+|
T Consensus 229 ~~v~~H~~e~~~e~~~~~~~~G--~~~v~~l~~~g~l~~~~~~~H~~~l~~~d~~~la~~g~~v~~~P~sn~~lg~g~~p 306 (455)
T TIGR02022 229 APVHIHVAEQQKEVDDCLAWSG--RRPVEWLLDHGPVDARWCLVHATHLTDEETALLARSGAVAGLCPTTEANLGDGIFP 306 (455)
T ss_pred CceEEEECCChHHHHHHHHHhC--CCHHHHHHHcCCCCCCEEEEEeecCCHHHHHHHHHcCCeEEEChhhhccccCCCCC
Confidence 9999999988777666666544 45889999999999999999999999999999999999999999999876 67899
Q ss_pred HHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCC-CCCCCCCHHHHHHHHhHHHHHHccCCCccccc
Q 014702 316 IKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGT-TDPAALPAETVLRMATINGAKSVLWDNDIGSL 394 (420)
Q Consensus 316 ~~~~~~~gv~~~lgsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l 394 (420)
+++++++|+++++|||+.. ..+++++++.+.+.++......... ..+..++.+++++++|.|+|+++|+ + +|+|
T Consensus 307 i~~l~~~Gv~v~lGTD~~~---~~d~~~~m~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aT~~gAralg~-~-~GsL 381 (455)
T TIGR02022 307 AVDFVAAGGRFGIGSDSHV---VIDVAEELRQLEYGQRLRDRARNVLAAGPGPSVGRALYDAALLGGAQALGL-A-TGGL 381 (455)
T ss_pred HHHHHHCCCeEEEECCCCC---CCCHHHHHHHHHHHHHHHhcccccccCCcccchHHHHHHHHHHHHHHHhCC-C-CCcc
Confidence 9999999999999999743 4589999998877655321100000 1123577899999999999999999 4 7999
Q ss_pred ccCccccEEEEcCCCCCCCC
Q 014702 395 EAGKKADMVVVDPFSWPMVP 414 (420)
Q Consensus 395 ~~G~~ADlvv~d~~~~~~~~ 414 (420)
++||.|||||+|.+.+...|
T Consensus 382 e~Gk~ADlvvld~~~~~~~~ 401 (455)
T TIGR02022 382 RAGARADFLTLDGDHPYLAG 401 (455)
T ss_pred CCCCCcCEEEEeCCCcccCC
Confidence 99999999999988544443
No 25
>PRK07213 chlorohydrolase; Provisional
Probab=100.00 E-value=2.8e-41 Score=313.42 Aligned_cols=346 Identities=20% Similarity=0.299 Sum_probs=258.9
Q ss_pred EEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhcccCCC
Q 014702 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (420)
Q Consensus 21 ~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~~~~ 100 (420)
++|+|++|++.+ .....+++|+|++|+|++|++.. ...++||++|++| |||||+|+|+.++..++...+
T Consensus 2 ~li~~~~v~~~~--~~~~~~~~v~i~~g~I~~i~~~~--------~~~~~id~~g~~v-PGlvd~H~H~~~~~~rg~~~~ 70 (375)
T PRK07213 2 LVYLNGNFLYGE--DFEPKKGNLVIEDGIIKGFTNEV--------HEGNVIDAKGLVI-PPLINAHTHIGDSSIKDIGIG 70 (375)
T ss_pred EEEEeeEEEeCC--CCceeeeEEEEECCEEEEeccCC--------CCCeEEeCCCCEe-cceeeeccccCchhhhcCCCC
Confidence 679999999643 33457789999999999998741 2568999999999 999999999999988888877
Q ss_pred CChHHHhhh---ccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCccC---HHHHHHHHHHhCCeeEeeehhccCC
Q 014702 101 VDLMTWLHD---RIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH---VSEMAKAVELLGLRACLVQSTMDCG 174 (420)
Q Consensus 101 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~ 174 (420)
.++.+|+.. ..+.....+++++.+..+.....+++++|+||+.|+.... .....++....+++....
T Consensus 71 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~G~Ttv~D~~~~~~~~~~~~~~a~~~~~~r~~~~------- 143 (375)
T PRK07213 71 KSLDELVKPPNGLKHKFLNSCSDKELVEGMKEGLYDMYNNGIKAFCDFREGGIKGINLLKKASSDLPIKPIIL------- 143 (375)
T ss_pred CCHHHHccCCCcchHHHHhcCCHHHHHHHHHHHHHHHHHcCCeEEEEhhhcChhHHHHHHHHHHcCCCceEEe-------
Confidence 788888642 1122234667788888888899999999999999964222 233445555566665321
Q ss_pred CCCCcccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHcCCccceeccCCcchhHHHH
Q 014702 175 EGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVM 254 (420)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~ 254 (420)
+.+... ......+.....++. ..+ +++......+++.++.++++|+++++++++|+.+...+.+...
T Consensus 144 -~~~~~~---~~~~~~~~~~~~~~~----~~g-----~~~~~~~~~s~~~l~~~~~~A~~~g~~v~~H~~e~~~e~~~~~ 210 (375)
T PRK07213 144 -GRPTEA---DENELKKEIREILKN----SDG-----IGLSGANEYSDEELKFICKECKREKKIFSIHAAEHKGSVEYSL 210 (375)
T ss_pred -cCCCcc---cchhhHHHHHHHHHh----ccc-----ccccccccCCHHHHHHHHHHHHHcCCEEEEeeCCchhHHHHHH
Confidence 000000 011111112222211 111 4455556678999999999999999999999999887766655
Q ss_pred hhcCCCCChHHHHHHhccCCCccceeeccCCChhhHHHHHhcCCeEEECccchhhc-cCcccHHHHHHcCCcEEEccCCC
Q 014702 255 DTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGA 333 (420)
Q Consensus 255 ~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~gv~~~lgsD~~ 333 (420)
+.++ ...++.+...+.. .+ ++.|+.++++++++++++.|+.+++||.++... .+.+|++++.++|+++++|||+.
T Consensus 211 ~~~G--~~~v~~~~~~G~~-~~-~i~H~~~~~~~~i~~la~~g~~v~~~P~sn~~l~~g~~~v~~l~~~Gv~v~lGTD~~ 286 (375)
T PRK07213 211 EKYG--MTEIERLINLGFK-PD-FIVHATHPSNDDLELLKENNIPVVVCPRANASFNVGLPPLNEMLEKGILLGIGTDNF 286 (375)
T ss_pred HHcC--CChHHHHHhcCCC-CC-EEEECCCCCHHHHHHHHHcCCcEEECCcchhhhccCCccHHHHHHCCCEEEEeeCCC
Confidence 5443 3456667777764 44 579999999999999999999999999999876 67899999999999999999986
Q ss_pred CCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEcCCCCCCC
Q 014702 334 PSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMV 413 (420)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~ 413 (420)
+. +..+++++++.+.... +++++++++++|.|+|+++|+++ .|+|++||.||||++|.+.+ .
T Consensus 287 ~~-~~~~~~~e~~~~~~~~--------------~~~~~~~l~~aT~~gA~~lg~~~-~G~l~~G~~ADlvv~d~~~~--~ 348 (375)
T PRK07213 287 MA-NSPSIFREMEFIYKLY--------------HIEPKEILKMATINGAKILGLIN-VGLIEEGFKADFTFIKPTNI--K 348 (375)
T ss_pred CC-chHhHHHHHHHHHHHh--------------CcCHHHHHHHHHHHHHHHhCCCC-cCCcCCCCcccEEEEcCccc--c
Confidence 54 3557888888864332 38999999999999999999975 89999999999999998643 3
Q ss_pred CCCCCC
Q 014702 414 PVHDRG 419 (420)
Q Consensus 414 ~~~~~~ 419 (420)
|..||+
T Consensus 349 p~~dp~ 354 (375)
T PRK07213 349 FSKNPY 354 (375)
T ss_pred ccCCch
Confidence 555654
No 26
>PRK09356 imidazolonepropionase; Validated
Probab=100.00 E-value=2.7e-39 Score=305.29 Aligned_cols=359 Identities=20% Similarity=0.262 Sum_probs=236.1
Q ss_pred CCceEEEEecEEEeecCCc----eeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchh
Q 014702 17 SSSTMILHNAVIVTMDKES----RVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQ 92 (420)
Q Consensus 17 ~~~~~li~n~~v~~~d~~~----~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~ 92 (420)
+|++++|+|+.|++.++.. +.+++++|+|+||+|++|++..+.+.. ...++||++|++|||||||+|+|+++.
T Consensus 1 ~~~~~li~~~~v~~~~~~~~~~~~~~~~~~v~i~~g~I~~vg~~~~~~~~---~~~~~iD~~g~~v~PG~id~H~Hl~~~ 77 (406)
T PRK09356 1 MMADLLWTNAQLATMDGGGMGELGIIEDGAIAIEDGKIVWVGPEADLPAA---YAAEVIDAGGKLVTPGLIDCHTHLVFG 77 (406)
T ss_pred CCceEEEECCEEEecCCCCccccccccCcEEEEECCEEEEEeCccccccc---cCceEEECCCCEEeeceEecCCCcccC
Confidence 4678999999999876532 678899999999999999986543211 236899999999999999999999865
Q ss_pred hhccc-----CCCCChHHHhhhc--c---ccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCcc--CH---HHHHHHH
Q 014702 93 LAKGI-----ADDVDLMTWLHDR--I---WPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--HV---SEMAKAV 157 (420)
Q Consensus 93 ~~~~~-----~~~~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~--~~---~~~~~~~ 157 (420)
..++. ....++.+|+... + +.....+..++.+..+.....+++++|||++.+.+.. .. ....+..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~a~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~ 157 (406)
T PRK09356 78 GNRANEFELRLQGVSYEEIAAQGGGILSTVRATRAASEEELFAQALPRLDALLAEGVTTVEIKSGYGLDLETELKMLRVA 157 (406)
T ss_pred CCcHHHHHHHHCCCcHHHHHHhcCChHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCceEEEeeccCCCCHHHHHHHHHHH
Confidence 44331 1233444444321 1 1123345667777777888899999999999875422 11 1122233
Q ss_pred HHh----CCeeEeeehhccCCCCCCcccccCChhHHHHHH-HHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHH
Q 014702 158 ELL----GLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQ-KELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMA 232 (420)
Q Consensus 158 ~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a 232 (420)
... +++... ... .+.+.+.... ......+... .++++..... +.+...-........+++.+.++++++
T Consensus 158 ~~~~~~~~i~~~~--~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~l~~~~~~A 231 (406)
T PRK09356 158 RRLGEEHPVDVVT--TFL-GAHAVPPEYK-GRPDAYIDLVCEEMLPAVAEE--GLADAVDVFCETGAFSVEQSERVLEAA 231 (406)
T ss_pred HHHhhhCCCceEe--eee-ecccCCcccc-CCHHHHHHHHHHHHhHHHHhc--CCcceEEEEecCCCCCHHHHHHHHHHH
Confidence 332 232211 111 1112222211 1122222221 2233332221 122222222333456789999999999
Q ss_pred HHcCCccceeccCCcchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCCChhhHHHHHhcCCeEEECccchhhc--
Q 014702 233 REFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-- 310 (420)
Q Consensus 233 ~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-- 310 (420)
+++|+++++|+.+.... +........+ ...+.|+.++++++++++++.|+.+++||.++...
T Consensus 232 ~~~g~~v~~H~~~~~~~------------~~~~~~~~~~----~~~~~H~~~~~~~~~~~la~~g~~~~~~P~~~~~l~~ 295 (406)
T PRK09356 232 KALGLPVKIHAEQLSNL------------GGAELAAEYG----ALSADHLEYLDEAGIAAMAEAGTVAVLLPGAFYFLRE 295 (406)
T ss_pred HHCCCCEEEEEecccCC------------CHHHHHHHcC----CcEehHhhcCCHHHHHHHHHhCCEEEECccchhhcCc
Confidence 99999999999763211 1111122212 23478999999999999999999999999988665
Q ss_pred cCcccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCc
Q 014702 311 LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDND 390 (420)
Q Consensus 311 ~~~~~~~~~~~~gv~~~lgsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~ 390 (420)
.+..|++++.+.|+++++|||+.+.. +++..+........ ...+++.+++++++|.|||+++|++++
T Consensus 296 ~~~~~~~~l~~~Gi~v~lgtD~~~~~---~~~~~~~~~~~~~~----------~~~~l~~~~~l~~~T~~~A~~~g~~~~ 362 (406)
T PRK09356 296 TQYPPARLLRDAGVPVALATDFNPGS---SPTESLLLAMNMAC----------TLFRLTPEEALAAVTINAARALGRQDT 362 (406)
T ss_pred ccCchHHHHHHCCCeEEEeCCCCCCC---ChhHHHHHHHHHHh----------hhcCCCHHHHHHHHHHHHHHHhCCCCC
Confidence 45789999999999999999985421 23444433322110 113599999999999999999999888
Q ss_pred ccccccCccccEEEEcCCCCCCC
Q 014702 391 IGSLEAGKKADMVVVDPFSWPMV 413 (420)
Q Consensus 391 ~G~l~~G~~ADlvv~d~~~~~~~ 413 (420)
+|+|++||.|||||+|.+++...
T Consensus 363 ~G~i~~G~~AD~vvld~~~~~~~ 385 (406)
T PRK09356 363 HGSLEVGKKADLVIWDAPSPAEL 385 (406)
T ss_pred ceeeCCCCcCCEEEECCCchhhh
Confidence 99999999999999999986543
No 27
>COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only]
Probab=100.00 E-value=4.2e-38 Score=295.23 Aligned_cols=369 Identities=21% Similarity=0.217 Sum_probs=236.8
Q ss_pred CCceEEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhcc
Q 014702 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (420)
Q Consensus 17 ~~~~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~ 96 (420)
+.+|+++.||+|||++..... ...|+|+||||++||+..++... .+..+++||++|++|+|||||+|.|+...++..
T Consensus 3 ~~adlil~nG~i~T~~~~~p~--aeAvaI~dGrI~avG~~~~~~~~-~~~~t~viDL~Gk~v~PGfvDaH~Hl~~~G~~~ 79 (535)
T COG1574 3 MAADLILHNGRIYTMDEARPT--AEAVAIKDGRIVAVGSDAELKAL-AGPATEVIDLKGKFVLPGFVDAHLHLISGGLSL 79 (535)
T ss_pred cccceeEECCEEEeccCCCcc--eeEEEEcCCEEEEEcChHHHHhh-cCCCceEEeCCCCEeccccchhhHHHHHhhhhh
Confidence 578999999999999875554 44999999999999998777654 335889999999999999999999996422100
Q ss_pred -----------------------------------cC-------CCCCh---------------------HHHhhh----
Q 014702 97 -----------------------------------IA-------DDVDL---------------------MTWLHD---- 109 (420)
Q Consensus 97 -----------------------------------~~-------~~~~~---------------------~~~~~~---- 109 (420)
.. ...+. ..|++.
T Consensus 80 ~~~~~~~~~~~~~~~~~i~~~a~~~~~~~w~~~vG~g~~~~~~~~~~~t~~~lD~~~~~~Pv~l~r~~~H~a~~Ns~aL~ 159 (535)
T COG1574 80 LELNLDGVRSLDDLLAALRRQAARTPPGQWVVVVGWGWDEQFWEERLPTLAELDAAAPDHPVLLIRLDGHVAVANSAALR 159 (535)
T ss_pred hcccccccCCHHHHHHHHHHHHHhCCCCCceEEEEcChhhhccccCCCcHHHhhccCCCCCEEEEeccChHHHHhHHHHH
Confidence 00 00000 011110
Q ss_pred ---ccccc-------------------------------cCCCChHHHHHHHHH-HHHHHHhCCcceeeeCCc--cCHH-
Q 014702 110 ---RIWPY-------------------------------ESNMTEEDSYISTLL-CGIELIHSGVTCFAEAGG--QHVS- 151 (420)
Q Consensus 110 ---~~~~~-------------------------------~~~~~~~~~~~~~~~-~~~~~~~~Gvtt~~~~~~--~~~~- 151 (420)
...+. .+............. ..+.+++.|||++.++.. ....
T Consensus 160 ~~Gi~~~t~~p~gg~~~~d~~g~ptG~L~e~a~~~~~~~~~~~~~~~~~~~~~~~a~~~l~s~GiT~v~d~~~~~~~~~~ 239 (535)
T COG1574 160 LAGITRDTPDPPGGIIGRDADGEPTGLLLENAQALVARLAPPPSPAEELEAAAARAARELNSLGITGVHDMAGYQGYYAD 239 (535)
T ss_pred HcCCCCCCCCCCCCcccccCCCCCCeeehHhhHHHHHHhcCCCCchHHHHHHHHHHHHHHHhcCCeEEEcccccccchhH
Confidence 00000 000000111111112 566888999999999885 1111
Q ss_pred -HHHHHHHHhC-CeeEeeehhccCCCCCCcccccCChhHHHHHHHHHHHHhcC---CCCCceEEEE--------------
Q 014702 152 -EMAKAVELLG-LRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHH---AADGRIRIWF-------------- 212 (420)
Q Consensus 152 -~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~~-------------- 212 (420)
...+.....+ +...+...+.... ... +....+..... ..-+.++.+.
T Consensus 240 ~~~~r~~~~~~~l~~rv~~~l~~~~-----------~~~---~~~~~~~~~~~~~~~~~g~~K~f~Dgslg~rtA~l~~~ 305 (535)
T COG1574 240 YEAYRALAAGGELPVRVALLLFTED-----------LKE---ERLDLLRQTGAKGLLQGGGVKLFADGSLGERTALLAAP 305 (535)
T ss_pred HHHHHHHHhcCcceEEEEeeccccc-----------hhh---HHHhhcccCCccceeecCceEEEEeCCCCcchhhccCc
Confidence 2222222222 1111111111100 000 00011110000 0001111211
Q ss_pred -----eeccccccCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCCCh
Q 014702 213 -----GIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH 287 (420)
Q Consensus 213 -----~~~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~ 287 (420)
...+....+++.++++++.+.++|+++.+|+..+......... ........+..+.+..++|...+++
T Consensus 306 y~d~~~~~G~~l~~~e~l~~~v~~a~~~gl~v~vHAiGD~Av~~~Lda-------fE~~~~~~~~~~~r~rieH~~~v~~ 378 (535)
T COG1574 306 YADGPGPSGELLLTEEELEELVRAADERGLPVAVHAIGDGAVDAALDA-------FEKARKKNGLKGLRHRIEHAELVSP 378 (535)
T ss_pred ccCCCCCCCCcccCHHHHHHHHHHHHHCCCcEEEEEechHHHHHHHHH-------HHHHhhhcCCccCCceeeeeeecCH
Confidence 0113345688999999999999999999999987654332221 1112222233456678999999999
Q ss_pred hhHHHHHhcCCeEEECccchh-------------hccCcccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcc
Q 014702 288 TEIGLLSRAGVKVSHCPASAM-------------RMLGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKG 354 (420)
Q Consensus 288 ~~~~~~~~~~~~~~~~p~~~~-------------~~~~~~~~~~~~~~gv~~~lgsD~~~~~~~~~~~~~~~~~~~~~~~ 354 (420)
++++++++.|+.++++|.+.. +....+|++.|+++|+.++.|||++.. ..++|..+..++.....
T Consensus 379 ~~i~R~~~Lgv~~svQP~f~~~~~~~~~~rlG~~r~~~~~p~~~ll~~G~~la~gSD~Pv~--~~dP~~~i~~AVtr~~~ 456 (535)
T COG1574 379 DQIERFAKLGVIASVQPNFLFSDGEWYVDRLGEERASRSYPFRSLLKAGVPLAGGSDAPVE--PYDPWLGIYAAVTRKTP 456 (535)
T ss_pred hHHHHHHhcCceEeeccccccccchHHHHhhhhhhhhccCcHHHHHHCCCeEeccCCCCCC--CCChHHHHHHHHcCCCC
Confidence 999999999999999987642 224468999999999999999999873 46899999999775543
Q ss_pred cccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEcCCCCCCCC
Q 014702 355 REVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVP 414 (420)
Q Consensus 355 ~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~ 414 (420)
...... ....+|+++||++.|.++|++.+.++++|+|++||.|||+|+|.|+|+..|
T Consensus 457 ~g~~~~---~~~~L~~~eAL~~yT~~~A~a~~~e~~~G~Le~G~~AD~~Vld~d~f~~~~ 513 (535)
T COG1574 457 GGRVLG---PEERLTREEALRAYTEGGAYASGAEGEKGSLEPGKLADFAVLDRDPFTVDP 513 (535)
T ss_pred CCCCCc---cccccCHHHHHHHHhhhhHHhhhccccccccccCceeeEEEecCCcccCCh
Confidence 221110 012699999999999999999999999999999999999999999998554
No 28
>cd01293 Bact_CD Bacterial cytosine deaminase and related metal-dependent hydrolases. Cytosine deaminases (CDs) catalyze the deamination of cytosine, producing uracil and ammonia. They play an important role in pyrimidine salvage. CDs are present in prokaryotes and fungi, but not mammalian cells. The bacterial enzymes, but not the fungal enzymes, are related to the adenosine deaminases (ADA). The bacterial enzymes are iron dependent and hexameric.
Probab=100.00 E-value=2.3e-38 Score=299.49 Aligned_cols=348 Identities=19% Similarity=0.183 Sum_probs=235.5
Q ss_pred EEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhcccCCCCC
Q 014702 23 LHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVD 102 (420)
Q Consensus 23 i~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~~~~~~ 102 (420)
|+|++|+ |+. ..+++|+|+||+|++|++..+.+ .+.++||++|++|+|||||+|+|+.+...++...+..
T Consensus 2 ~~~~~~~--~~~---~~~~~v~I~~g~I~~Vg~~~~~~-----~~~~vID~~g~~v~PGlId~H~H~~~~~~~~~~~~~~ 71 (398)
T cd01293 2 LRNARLA--DGG---TALVDIAIEDGRIAAIGPALAVP-----PDAEEVDAKGRLVLPAFVDPHIHLDKTFTGGRWPNNS 71 (398)
T ss_pred eeeeEEe--CCC---ceEEEEEEECCEEEEEecCCCCC-----CCCceEeCCCCEEccCEeeeeeccCcccccCCCCCCC
Confidence 7899999 441 36789999999999999865421 3679999999999999999999998877666544433
Q ss_pred hHHHhhhc--cccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCccC-------HHHHHHHHHHhCCeeEeeehhccC
Q 014702 103 LMTWLHDR--IWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-------VSEMAKAVELLGLRACLVQSTMDC 173 (420)
Q Consensus 103 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~~-------~~~~~~~~~~~g~~~~~~~~~~~~ 173 (420)
...|+... +++....+++++.+........+++++|||++.++.... .....+.....+.+.........
T Consensus 72 ~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 150 (398)
T cd01293 72 GGTLLEAIIAWEERKLLLTAEDVKERAERALELAIAHGTTAIRTHVDVDPAAGLKALEALLELREEWADLIDLQIVAFP- 150 (398)
T ss_pred ccccHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHcChhheeeeecccccccchHHHHHHHHHHHhhccceEEEEecc-
Confidence 33333211 112234567778888888899999999999997754311 22333443344333322211111
Q ss_pred CCCCCcccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHcCCccceeccCCcchhHHH
Q 014702 174 GEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVV 253 (420)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~ 253 (420)
+..... . .+..++++++...+...+.. +........+++.++++++.|+++|+++++|+.+........
T Consensus 151 ----~~~~~~--~----~~~~~~v~~~~~~g~~~~~~-~~~~~~~~~s~e~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~ 219 (398)
T cd01293 151 ----QHGLLS--T----PGGEELMREALKMGADVVGG-IPPAEIDEDGEESLDTLFELAQEHGLDIDLHLDETDDPGSRT 219 (398)
T ss_pred ----CccccC--C----CCHHHHHHHHHHhCCCEEeC-CCCCcCCccHHHHHHHHHHHHHHhCCCCEEEeCCCCCcchhH
Confidence 000000 0 12233344443333222221 222223456789999999999999999999998765432111
Q ss_pred HhhcCCCCChHHHHHHhccCCCccceeeccCCCh-------hhHHHHHhcCCeEEECccchhhc----------cCcccH
Q 014702 254 MDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH-------TEIGLLSRAGVKVSHCPASAMRM----------LGFAPI 316 (420)
Q Consensus 254 ~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~-------~~~~~~~~~~~~~~~~p~~~~~~----------~~~~~~ 316 (420)
.. .....+...+.. .+..+.|+.+++. +.++++++.|+.+++||.++... .+.+|+
T Consensus 220 ~~------~~~~~~~~~g~~-~~~~i~H~~~~~~~~~~~~~~~~~~l~~~g~~v~~~p~s~~~l~~~~~~~~~~~~~~~~ 292 (398)
T cd01293 220 LE------ELAEEAERRGMQ-GRVTCSHATALGSLPEAEVSRLADLLAEAGISVVSLPPINLYLQGREDTTPKRRGVTPV 292 (398)
T ss_pred HH------HHHHHHHHhCCC-CCEEeeecchhhcCCHHHHHHHHHHHHHcCCeEEeCCCcchhhcccccCCCCCCCCCcH
Confidence 11 123344555555 5678899998763 44899999999999999988543 467899
Q ss_pred HHHHHcCCcEEEccCCCC----CCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCccc
Q 014702 317 KEMLHADICVSLGTDGAP----SNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIG 392 (420)
Q Consensus 317 ~~~~~~gv~~~lgsD~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G 392 (420)
+++.++|+++++|||+.. .....++++.++.+....+.. ...+.+++++++|.|+|+++|+ ++|
T Consensus 293 ~~~~~~Gv~v~lGTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~al~~aT~~~A~~lg~--~~G 360 (398)
T cd01293 293 KELRAAGVNVALGSDNVRDPWYPFGSGDMLEVANLAAHIAQLG----------TPEDLALALDLITGNAARALGL--EDY 360 (398)
T ss_pred HHHHHCCCeEEECCCCCCCCCcCCCCCCHHHHHHHHHHHHcCC----------ChhhHHHHHHhcChhhhhhcCC--cCc
Confidence 999999999999999842 223457888888765443311 1145689999999999999999 369
Q ss_pred ccccCccccEEEEcCCCCC
Q 014702 393 SLEAGKKADMVVVDPFSWP 411 (420)
Q Consensus 393 ~l~~G~~ADlvv~d~~~~~ 411 (420)
+|++||.||||++|.+++.
T Consensus 361 ~l~~Gk~ADlv~~d~~~~~ 379 (398)
T cd01293 361 GIKVGCPADLVLLDAEDVA 379 (398)
T ss_pred ccccCCcceEEEECCCCHH
Confidence 9999999999999999754
No 29
>PRK14085 imidazolonepropionase; Provisional
Probab=100.00 E-value=1.4e-37 Score=290.01 Aligned_cols=347 Identities=18% Similarity=0.265 Sum_probs=228.5
Q ss_pred ceEEEEe-cEEEeecCCc-----eeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchh
Q 014702 19 STMILHN-AVIVTMDKES-----RVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQ 92 (420)
Q Consensus 19 ~~~li~n-~~v~~~d~~~-----~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~ 92 (420)
++++|+| +.|+|+|+.. .++++++|+|+||+|++|++....+ .+.++||++|++|||||||+|+|+...
T Consensus 1 ~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~v~i~~g~I~~Vg~~~~~~-----~~~~~iD~~g~~v~PGlId~H~Hl~~~ 75 (382)
T PRK14085 1 MSTLITNIGELVTNDPELGEGPLGVLRDAAVVVEGGRVAWVGPAADAP-----AADERVDAGGRAVLPGFVDSHSHLVFA 75 (382)
T ss_pred CcEEEEcccEEEcCCCcccCCCcccccCcEEEEECCEEEEEcCCccCC-----CCCeEEeCCCCEEecCeEecCcCcccc
Confidence 4689999 5999998654 6889999999999999999864321 366899999999999999999999764
Q ss_pred hhcccCCCCChHHHhhhcc---------ccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCccC--HHHHHHHHHHhC
Q 014702 93 LAKGIADDVDLMTWLHDRI---------WPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH--VSEMAKAVELLG 161 (420)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~~--~~~~~~~~~~~g 161 (420)
..++. ++..+..... ++....++.++.+..+.....+++++|+|++++.++.. .....+..+..+
T Consensus 76 ~~r~~----~~~~~~~~~~~~~~~i~~~~~~~~~~t~e~~~~~a~~~~~~~l~~G~Ttv~~~~~~~~~~~~~~~~~~~~~ 151 (382)
T PRK14085 76 GDRSA----EFAARMAGEPYSAGGIRTTVAATRAASDEELRANVRRLVAEALRQGTTTVETKTGYGLTVEDEARSARIAA 151 (382)
T ss_pred CChhH----HHHhhhcCCCccCCChHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCceEEEcCCcCCCCHHHHHHHHHHHH
Confidence 44331 1111111111 12234566778888888899999999999999976432 333333332222
Q ss_pred CeeEeeehhccCCCCCCcccccCChhHHHHHHH-HHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHcCCccc
Q 014702 162 LRACLVQSTMDCGEGLPASWAVRTTDDCIQSQK-ELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIH 240 (420)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~ 240 (420)
+... ......+...+..+. .....+..... ..+.... .....++++... ...+++.++++++.++++|+++.
T Consensus 152 -~~~~-~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~idi~~~~---~~~~~~~l~~~~~~a~~~g~~v~ 224 (382)
T PRK14085 152 -EFTD-EVTFLGAHVVPPEYA-GDADEYVDLVCGPMLDAVA-PHARWIDVFCER---GAFDEDQSRRVLTAGRAAGLGLR 224 (382)
T ss_pred -Hhhh-cceeeccccCCcccC-CCHHHHHHHHHHHHHHHHH-HhCCeEEEEecC---CCCCHHHHHHHHHHHHHcCCCeE
Confidence 1100 011111112222211 12222222211 1111111 123445554432 13578899999999999999999
Q ss_pred eeccCCcchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCCChhhHHHHHhcCCeEEECccchhhc-cCcccHHHH
Q 014702 241 MHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEM 319 (420)
Q Consensus 241 ~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~ 319 (420)
+|+.+.... ..+..+...+. ..+.|+.++++++++++++.|+.+++||.++... .+.+|++++
T Consensus 225 ~H~~~~~~~------------~~v~~~~~~g~----~~i~H~~~l~~~~~~~la~~gv~~~~~P~~~~~~~~~~~~~~~l 288 (382)
T PRK14085 225 VHGNQLGPG------------PGVRLAVELGA----ASVDHCTYLTDADVDALAGSGTVATLLPGAEFSTRQPYPDARRL 288 (382)
T ss_pred EEeCcccCC------------hHHHHHHHcCC----CcHHHhCCCCHHHHHHHHHcCCEEEECcHHHHhcCCCCchHHHH
Confidence 999753211 01222222222 2478999999999999999999999999987654 457899999
Q ss_pred HHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCcc
Q 014702 320 LHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKK 399 (420)
Q Consensus 320 ~~~gv~~~lgsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ 399 (420)
.+.|+++++|||+.+.. .+...+........ ...+++++++++++|.|||+++|+++ +|+|++||.
T Consensus 289 ~~aGv~v~lgsD~~~~~---~~~~~~~~~~~~~~----------~~~~l~~~~al~~aT~~~A~~lg~~~-~G~l~~G~~ 354 (382)
T PRK14085 289 LDAGVTVALASDCNPGS---SYTSSMPFCVALAV----------RQMGMTPAEAVWAATAGGARALRRDD-VGVLAVGAR 354 (382)
T ss_pred HHCCCcEEEEeCCCCCC---ChHHHHHHHHHHHH----------HhcCCCHHHHHHHHHHHHHHHcCCCC-CCCcCCCCC
Confidence 99999999999986432 12222222211100 12359999999999999999999975 799999999
Q ss_pred ccEEEEcCCCCC
Q 014702 400 ADMVVVDPFSWP 411 (420)
Q Consensus 400 ADlvv~d~~~~~ 411 (420)
|||+|+|.+...
T Consensus 355 ADlvv~d~~~~~ 366 (382)
T PRK14085 355 ADLHVLDAPSHL 366 (382)
T ss_pred CCEEEEcCCCCc
Confidence 999999998643
No 30
>TIGR01224 hutI imidazolonepropionase. This enzyme catalyzes the third step in histidine degradation.
Probab=100.00 E-value=1e-37 Score=291.77 Aligned_cols=336 Identities=21% Similarity=0.276 Sum_probs=224.6
Q ss_pred eceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhccc-----CCCCChHHHhhhc--c
Q 014702 39 RNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI-----ADDVDLMTWLHDR--I 111 (420)
Q Consensus 39 ~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~-----~~~~~~~~~~~~~--~ 111 (420)
++++|+|+||+|++||+....+.. .+.++||++|++|||||||+|+|++....++. ..+.++.+|+... +
T Consensus 2 ~~~~v~i~~g~I~~vg~~~~~~~~---~~~~~iD~~g~~v~PGlin~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (377)
T TIGR01224 2 EDAVILIHGGKIVWIGQLAALPGE---EATEIIDCGGGLVTPGLVDPHTHLVFAGDRVNEFEMKLQGASYLEILAQGGGI 78 (377)
T ss_pred CceEEEEECCEEEEEechhhCCcc---cCCeEEeCCCCEEcccEEecccCccccCCcHHHHHHHhCCCCHHHHHHhcCCh
Confidence 567999999999999985432210 25689999999999999999999987665542 3466888998652 2
Q ss_pred ---ccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCC--ccCH---HHHHHHHH----HhCCeeEeeehhccCCCCCCc
Q 014702 112 ---WPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG--GQHV---SEMAKAVE----LLGLRACLVQSTMDCGEGLPA 179 (420)
Q Consensus 112 ---~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~--~~~~---~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~ 179 (420)
++....++.++.+..+.....+++++|+|++.... +... ....+..+ ..+++.... .... ...+.
T Consensus 79 ~~~~~~~~~~~~ed~~~~a~~~~~e~l~~Gvt~ve~~~~~g~~~~~~~~~~~a~~~~~~~~~i~~~~~--~~~~-~~~~~ 155 (377)
T TIGR01224 79 LSTVRATRAASEEELLKLALFRLKSMLRSGTTTAEVKSGYGLDLETELKMLRAAKALHEEQPVDVVTT--FLGA-HAVPP 155 (377)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHCCceEEEecccCCCCHHHHHHHHHHHHHHHhhCCCceEee--eeec-ccCCc
Confidence 25566788888888988999999999999984321 1111 12223322 244444322 1111 01111
Q ss_pred ccccCChhHHHHHH-HHHHHHhcCCC-CCceEEEEeeccccccCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhc
Q 014702 180 SWAVRTTDDCIQSQ-KELYAKHHHAA-DGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTR 257 (420)
Q Consensus 180 ~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~ 257 (420)
.... ......... ..++++....+ -..++. ++.+. ..+.+.+.+++++|+++|+++.+|+.+....
T Consensus 156 ~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~--~~~~~~~~~~~~~A~~~g~~v~~H~~e~~~~-------- 223 (377)
T TIGR01224 156 EFQG-RPDDYVDGICEELIPQVAEEGLASFADV-FCEAG--VFSVEQSRRILQAAQEAGLPVKLHAEELSNL-------- 223 (377)
T ss_pred cccC-CHHHHHHHHHHHHHHHHHHhCCCCeeEE-EecCC--CcCHHHHHHHHHHHHHCCCCEEEEecCCCCC--------
Confidence 1000 112222212 12333332211 111111 23322 3457789999999999999999999874321
Q ss_pred CCCCChHHHHHHhccCCCccceeeccCCChhhHHHHHhcCCeEEECccchhhc-cCcccHHHHHHcCCcEEEccCCCC-C
Q 014702 258 KVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAP-S 335 (420)
Q Consensus 258 ~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~gv~~~lgsD~~~-~ 335 (420)
...+.+...+ ...+.|+.++++++++++++.|+.+++||.++... .+.+|++++.+.|+++++|||+.+ .
T Consensus 224 ----~~~~~~~~~g----~~~~~H~~~~~~~~l~~la~~g~~~~~~P~~~~~l~~~~~p~~~l~~~Gv~v~lgTD~~~~~ 295 (377)
T TIGR01224 224 ----GGAELAAKLG----AVSADHLEHASDAGIKALAEAGTVAVLLPGTTFYLRETYPPARQLIDYGVPVALATDLNPGS 295 (377)
T ss_pred ----CHHHHHHHcC----CCccHHHhcCCHHHHHHHHhcCCEEEECchHHHhcCCcCccHHHHHHCCCCEEEECCCCCCC
Confidence 1122222222 23467999999999999999999999999988765 467899999999999999999754 2
Q ss_pred CCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEcCCCCCCCC
Q 014702 336 NNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVP 414 (420)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~ 414 (420)
.+..+++..+..+.. ..++|.+++++++|.|||+++|+++++|+|++||.|||||||.+++...+
T Consensus 296 ~~~~~~~~~~~~~~~--------------~~~ls~~eal~~~T~~~A~~lg~~~~~G~l~~G~~ADlvv~d~~~~~~~~ 360 (377)
T TIGR01224 296 SPTLSMQLIMSLACR--------------LMKMTPEEALHAATVNAAYALGLGEERGTLEAGRDADLVILSAPSYAEIP 360 (377)
T ss_pred ChhHHHHHHHHHHHH--------------hcCCCHHHHHHHHHHHHHHHhCCCCCceeeCCCCcCCEEEEcCCChHHhh
Confidence 222223333322211 13599999999999999999999887899999999999999999876544
No 31
>PRK09230 cytosine deaminase; Provisional
Probab=100.00 E-value=5.1e-37 Score=288.28 Aligned_cols=346 Identities=17% Similarity=0.212 Sum_probs=240.6
Q ss_pred CceEEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhccc
Q 014702 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (420)
Q Consensus 18 ~~~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~ 97 (420)
...++|+|++|+ ++. . ..+|+|+||+|++|++....+ ..+.++||++|++|||||||+|+|+.+...++.
T Consensus 3 ~~~~li~~~~~~--~~~-~---~~~i~i~~g~I~~i~~~~~~~----~~~~~~id~~g~~v~PGlid~H~H~~~~~~~~~ 72 (426)
T PRK09230 3 NALMTIKNARLP--GKE-G---LWQITIEDGKISAIEPQSEAS----LEAGEVLDAEGGLAIPPFIEPHIHLDTTQTAGE 72 (426)
T ss_pred CceEEEECcEEc--CCC-e---eEEEEEECCEEEEecCCCCCC----CCCCceEeCCCCEeccceeEEEEccccceecCC
Confidence 367899999998 432 2 249999999999999864311 125689999999999999999999998777664
Q ss_pred C---CCCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCccC------HHHHHHHHHHhCCeeEeee
Q 014702 98 A---DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH------VSEMAKAVELLGLRACLVQ 168 (420)
Q Consensus 98 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~~------~~~~~~~~~~~g~~~~~~~ 168 (420)
. .+.++.+|+... ++....++.++.+..+.....+++++|+|++.++-... .....+.....+...-++.
T Consensus 73 ~~~~~~~~l~~~i~~~-~~~~~~~t~ed~~~~a~~~~~e~l~~GvTtvr~~~d~~~~~~~~~~a~~~~~~~~~~~~~~~i 151 (426)
T PRK09230 73 PNWNQSGTLFEGIERW-AERKALLTHEDVKQRAWQTLKWQIANGIQHVRTHVDVSDPTLTALKAMLEVKEEVAPWVDLQI 151 (426)
T ss_pred CccCCCCCHHHHHHHH-HHHHhcCCHHHHHHHHHHHHHHHHHcCcccEEeccccCCcchhHHHHHHHHHHHhhCcceEEE
Confidence 3 456688888663 55556677888888999999999999999998764321 1222333333222111111
Q ss_pred hhccCCCC-CCcccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeecccccc--CHHHHHHHHHHHHHcCCccceeccC
Q 014702 169 STMDCGEG-LPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNA--TDRLLLETRDMAREFKTGIHMHVAE 245 (420)
Q Consensus 169 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~~~l~~~~~~a~~~~~~v~~h~~~ 245 (420)
..... .+ ... .... +.++.....+...+. ..++..+.. +++.+..++++|+++|+++++|+.+
T Consensus 152 ~a~~~-~~~~~~----~~~~-------~~l~~a~~~~~~~vg--~~p~~~~~~~~~~e~l~~~~~~A~~~g~~~~~H~~E 217 (426)
T PRK09230 152 VAFPQ-EGILSY----PNGE-------ALLEEALRLGADVVG--AIPHFEFTREYGVESLHKAFALAQKYDRLIDVHCDE 217 (426)
T ss_pred EeccC-ccccCC----ccHH-------HHHHHHHHcCCCEEe--CCCCccccchhHHHHHHHHHHHHHHhCCCcEEEECC
Confidence 11000 00 000 0111 112222222222221 233333332 5788999999999999999999998
Q ss_pred CcchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCC-------ChhhHHHHHhcCCeEEECccchhhc--------
Q 014702 246 IPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV-------NHTEIGLLSRAGVKVSHCPASAMRM-------- 310 (420)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~-------~~~~~~~~~~~~~~~~~~p~~~~~~-------- 310 (420)
.......... .+.+++...+ ++.+.++.|+.++ ++++++++++.|+.+++||.+++.+
T Consensus 218 ~~~~~~~~~~------~~~~~~~~~g-l~~~v~~~H~~~l~~~~~~~~~~~~~~La~~gv~vv~cP~sn~~l~~~~~~~p 290 (426)
T PRK09230 218 IDDEQSRFVE------TVAALAHREG-MGARVTASHTTAMHSYNGAYTSRLFRLLKMSGINFVANPLVNIHLQGRFDTYP 290 (426)
T ss_pred CCCcchHHHH------HHHHHHHHhC-CCCCEEEEecCchhcCCHHHHHHHHHHHHHcCCeEEECcchhhhhcCCCCCCC
Confidence 7654432111 2566677777 6888999999999 4778999999999999999998755
Q ss_pred --cCcccHHHHHHcCCcEEEccCCCCC----CCCCCHHHHHHHHHHHhcccccccCCCCCCCCC-CHHHHHHHHhHHHHH
Q 014702 311 --LGFAPIKEMLHADICVSLGTDGAPS----NNRMSIVDEMYLASLINKGREVFANGTTDPAAL-PAETVLRMATINGAK 383 (420)
Q Consensus 311 --~~~~~~~~~~~~gv~~~lgsD~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-s~~~al~~~T~~~A~ 383 (420)
.+..|+++|.++|+++++|||+... ....++++.++.+....+.. .. +++++++++|.|+|+
T Consensus 291 ~~~g~~pi~~l~~aGv~V~lGTD~~~d~~~~~~~~d~~~~~~~~~~~~~~~-----------~~~~~~~~l~maT~~gA~ 359 (426)
T PRK09230 291 KRRGITRVKEMLEAGINVCFGHDDVFDPWYPLGTANMLQVLHMGLHVCQLM-----------GYGQINDGLNLITTHSAR 359 (426)
T ss_pred CCCCCcCHHHHHHCCCeEEEecCCCCCCCcCCCCCCHHHHHHHHHHHHhhC-----------ChhhHHHHHHHHhcchhH
Confidence 4567899999999999999997532 12457777777654433211 01 367999999999999
Q ss_pred HccCCCcccccccCccccEEEEcCC
Q 014702 384 SVLWDNDIGSLEAGKKADMVVVDPF 408 (420)
Q Consensus 384 ~lgl~~~~G~l~~G~~ADlvv~d~~ 408 (420)
++|+++ .| |++||.||||++|.+
T Consensus 360 alg~~~-~g-le~G~~ADlv~~~~~ 382 (426)
T PRK09230 360 TLNLQD-YG-IEVGNPANLIILPAE 382 (426)
T ss_pred HhCCCC-cC-CCCCCcCCEEEEeCC
Confidence 999987 68 999999999999974
No 32
>cd01296 Imidazolone-5PH Imidazolonepropionase/imidazolone-5-propionate hydrolase (Imidazolone-5PH) catalyzes the third step in the histidine degradation pathway, the hydrolysis of (S)-3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate to N-formimidoyl-L-glutamate. In bacteria, the enzyme is part of histidine utilization (hut) operon.
Probab=100.00 E-value=7.2e-36 Score=278.88 Aligned_cols=336 Identities=21% Similarity=0.281 Sum_probs=220.7
Q ss_pred EEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhccc-----CCCCChHHHhhhc---cc--
Q 014702 43 VFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI-----ADDVDLMTWLHDR---IW-- 112 (420)
Q Consensus 43 I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~-----~~~~~~~~~~~~~---~~-- 112 (420)
|+|+||+|++|++....+.. .....++||++|++|+|||||+|+|++++..++. ..+.++.+|+... .|
T Consensus 1 i~i~~g~I~~ig~~~~~~~~-~~~~~~~iD~~G~~v~Pg~vn~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (371)
T cd01296 1 IAIRDGRIAAVGPAASLPAP-GPAAAEEIDAGGRAVTPGLVDCHTHLVFAGDRVDEFAARLAGASYEEILAAGGGILSTV 79 (371)
T ss_pred CEEECCEEEEEeCchhcccc-cCCCceEEECCCCEEecceeecCCCCcCCCCcHHHHHHHHCCCCHHHHHHcCCChHHHH
Confidence 57999999999986543210 0025689999999999999999999987654432 1455677787642 22
Q ss_pred cccCCCChHHHHHHHHHHHHHHHhCCcceeeeCC--ccC---HHHHHHHHHHhCCe--eEeeehhccCCCCCCcccccCC
Q 014702 113 PYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG--GQH---VSEMAKAVELLGLR--ACLVQSTMDCGEGLPASWAVRT 185 (420)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~--~~~---~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~ 185 (420)
+....++.++.+..+......++++|+|++.+.. +.. .....++..+.+.+ ..+...+.. +...+.... .
T Consensus 80 ~~~~~~~~~d~~~~a~~~~~~~~~~Gvt~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~-~~~~p~~~~--~ 156 (371)
T cd01296 80 RATRAASEDELFASALRRLARMLRHGTTTVEVKSGYGLDLETELKMLRVIRRLKEEGPVDLVSTFLG-AHAVPPEYK--G 156 (371)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHCCceEEEecccCCCCHHHHHHHHHHHHHHHhhCCCceEeeeee-cccCCcccC--C
Confidence 3445677788888888999999999999998731 111 12233444443332 111111110 111121110 0
Q ss_pred hhHHHH-HHHHHHHHhc-CCCCCceEEEEeeccccccCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCCh
Q 014702 186 TDDCIQ-SQKELYAKHH-HAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGT 263 (420)
Q Consensus 186 ~~~~~~-~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~ 263 (420)
...... ...++++... ......++. .+.. ...+.+.++++++.|+++|+++.+|+.+..... .
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~A~~~g~~v~~H~~e~~~~~------------~ 221 (371)
T cd01296 157 REEYIDLVIEEVLPAVAEENLADFCDV-FCEK--GAFSLEQSRRILEAAKEAGLPVKIHADELSNIG------------G 221 (371)
T ss_pred hHHHHHHHHHHHHHHHHHhCCCCEEEE-eecC--CccCHHHHHHHHHHHHHCCCeEEEEEcCcCCCC------------H
Confidence 111111 1122333222 122223333 2222 234578999999999999999999998753211 1
Q ss_pred HHHHHHhccCCCccceeeccCCChhhHHHHHhcCCeEEECccchhhc-cCcccHHHHHHcCCcEEEccCCCCCCCC-CCH
Q 014702 264 VTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNR-MSI 341 (420)
Q Consensus 264 ~~~l~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~gv~~~lgsD~~~~~~~-~~~ 341 (420)
.......+ ...+.|+.++++++++++++.|+.+.+||.++... .+.+|++++++.|+++++|||+.+.... .++
T Consensus 222 ~~~~~~~g----~~~i~H~~~~~~~~i~~la~~g~~v~~~P~~~~~l~~~~~~~~~l~~~Gv~v~lgsD~~p~~~~~~~l 297 (371)
T cd01296 222 AELAAELG----ALSADHLEHTSDEGIAALAEAGTVAVLLPGTAFSLRETYPPARKLIDAGVPVALGTDFNPGSSPTSSM 297 (371)
T ss_pred HHHHHHcC----CCeeHHhcCCCHHHHHHHHHcCCeEEEChHHHHHhCCCCCCHHHHHHCCCcEEEecCCCCCCChHHHH
Confidence 11111222 23478999999999999999999999999988665 4478999999999999999998543221 124
Q ss_pred HHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEcCCCCCCCCC
Q 014702 342 VDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPV 415 (420)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~ 415 (420)
+..+..+... .+++++++++++|.|||+++|+++++|+|++||.|||||+|.+++...++
T Consensus 298 ~~~~~~~~~~--------------~~l~~~~al~~aT~~~A~~lg~~~~~G~i~~G~~ADlvv~d~~~~~~~~~ 357 (371)
T cd01296 298 PLVMHLACRL--------------MRMTPEEALTAATINAAAALGLGETVGSLEVGKQADLVILDAPSYEHLAY 357 (371)
T ss_pred HHHHHHHHHh--------------cCCCHHHHHHHHHHHHHHHhCCCCCceeeCCCCCcCEEEECCCchHhhhh
Confidence 4444443322 24999999999999999999998778999999999999999998765443
No 33
>PRK07572 cytosine deaminase; Validated
Probab=100.00 E-value=3.5e-35 Score=277.33 Aligned_cols=347 Identities=16% Similarity=0.144 Sum_probs=230.5
Q ss_pred ceEEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhccc-
Q 014702 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI- 97 (420)
Q Consensus 19 ~~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~- 97 (420)
++++|+|++|++ +. ...+|+|++|+|++|++.... ...++||++|++|+|||||+|+|+.++..++.
T Consensus 2 ~~~~i~~~~i~~--~~----~~~~i~i~~g~I~~v~~~~~~------~~~~~id~~g~~~~PG~id~h~h~~~~~~~~~~ 69 (426)
T PRK07572 2 FDLIVRNANLPD--GR----TGIDIGIAGGRIAAVEPGLQA------EAAEEIDAAGRLVSPPFVDPHFHMDATLSYGLP 69 (426)
T ss_pred CcEEEECeEECC--CC----eeEEEEEECCEEEEecCCCCC------CcCceEeCCCCEEcccceehhhCcchhhccCCC
Confidence 468899999994 32 245899999999999985321 25689999999999999999999988755443
Q ss_pred --CCCCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCC---ccC---HHHHHHHHHHhCCeeEeeeh
Q 014702 98 --ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG---GQH---VSEMAKAVELLGLRACLVQS 169 (420)
Q Consensus 98 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~---~~~---~~~~~~~~~~~g~~~~~~~~ 169 (420)
..+.++.+|+. .+......++.++.+.......++++++|+|+++++. ... .....+.....+.+......
T Consensus 70 ~~~~~g~l~e~l~-~~~~~~~~~t~edl~~~a~~~~~e~l~~G~Ttvrd~~d~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 148 (426)
T PRK07572 70 RVNASGTLLEGIA-LWGELKPLLTQEALVERALRYCDWAVARGLLAIRSHVDVCDPRLLAVEALLEVRERVAPYLDLQLV 148 (426)
T ss_pred CCCCCCCHHHHHH-HHHHHHhcCCHHHHHHHHHHHHHHHHHcCcccEeeccccCCCcccHHHHHHHHHHHhhccceEEEE
Confidence 34556677762 2212223466778888888899999999999999852 121 12222222222222211111
Q ss_pred -hccCCCCCCcccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeeccccccC--HHHHHHHHHHHHHcCCccceeccCC
Q 014702 170 -TMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNAT--DRLLLETRDMAREFKTGIHMHVAEI 246 (420)
Q Consensus 170 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~~l~~~~~~a~~~~~~v~~h~~~~ 246 (420)
+...+. +.. ..... .+++....+...++. .++.....+ .+.++.++++|+++|+++++|+.+.
T Consensus 149 a~~~~g~-----~~~---~~~~~----~~~~~l~~g~d~iGg--~p~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~e~ 214 (426)
T PRK07572 149 AFPQDGV-----LRS---PGAVD----NLERALDMGVDVVGG--IPHFERTMADGAESVRLLCEIAAERGLRVDMHCDES 214 (426)
T ss_pred eccChhh-----ccC---ccHHH----HHHHHHHcCCCEEeC--CCCCccccchHHHHHHHHHHHHHHcCCCeEEEECCC
Confidence 101110 000 01111 222222233233321 122222223 4899999999999999999999887
Q ss_pred cchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCCCh-------hhHHHHHhcCCeEEECccchhhc---------
Q 014702 247 PYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH-------TEIGLLSRAGVKVSHCPASAMRM--------- 310 (420)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~-------~~~~~~~~~~~~~~~~p~~~~~~--------- 310 (420)
........+ .....+...++.+ +.++.|+.+++. ++++++++.|+.+++||.+++..
T Consensus 215 ~~~~~~~~~------~~~~~~~~~G~~~-~v~~~H~~~l~~~~~~~~~~~~~~la~~g~~vv~~P~~n~~l~~~~~~~~~ 287 (426)
T PRK07572 215 DDPLSRHIE------TLAAETQRLGLQG-RVAGSHLTSMHSMDNYYVSKLIPLMAEAGVNAIANPLINITLQGRHDTYPK 287 (426)
T ss_pred CChhHHHHH------HHHHHHHHhCCCC-CEEEEccchhhcCCHHHHHHHHHHHHHcCCeEEECchhhhhhcCCCCCCCC
Confidence 654333222 1233455667666 778899988775 55999999999999999887643
Q ss_pred -cCcccHHHHHHcCCcEEEccCCCC----CCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHc
Q 014702 311 -LGFAPIKEMLHADICVSLGTDGAP----SNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSV 385 (420)
Q Consensus 311 -~~~~~~~~~~~~gv~~~lgsD~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~l 385 (420)
.+..+++++.+.|+++++|||+.. .....++++.++.+....+.. ....++++++++|.|+|++|
T Consensus 288 ~~g~~~v~~l~~~GV~v~lGtD~~~~~~~~~~~~~~~e~~~~~~~~~~~~----------~~~~l~~~l~~aT~~~A~~l 357 (426)
T PRK07572 288 RRGMTRVPELMAAGINVAFGHDCVMDPWYSLGSGDMLEVAHMGLHVAQMT----------GQDAMRACFDAVTVNPARIM 357 (426)
T ss_pred CCCCcCHHHHHHCCCcEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHcCC----------CHHHHHHHHHHhhcchHHhh
Confidence 356789999999999999999852 223467887777654433211 01235678889999999999
Q ss_pred cCCCcccccccCccccEEEEc-CCCCC
Q 014702 386 LWDNDIGSLEAGKKADMVVVD-PFSWP 411 (420)
Q Consensus 386 gl~~~~G~l~~G~~ADlvv~d-~~~~~ 411 (420)
|+++ .| |++||.||||++| .+|+.
T Consensus 358 gl~~-~g-i~~G~~ADlvl~d~~~p~e 382 (426)
T PRK07572 358 GLEG-YG-LEPGCNADLVLLQARDPIE 382 (426)
T ss_pred CCCC-cC-CCCCCcCCEEEEeCCCHHH
Confidence 9987 67 9999999999999 46655
No 34
>cd01314 D-HYD D-hydantoinases (D-HYD) also called dihydropyrimidases (DHPase) and related proteins; DHPases are a family of enzymes that catalyze the reversible hydrolytic ring opening of the amide bond in five- or six-membered cyclic diamides, like dihydropyrimidine or hydantoin. The hydrolysis of dihydropyrimidines is the second step of reductive catabolism of pyrimidines in human. The hydrolysis of 5-substituted hydantoins in microorganisms leads to enantiomerically pure N-carbamyl amino acids, which are used for the production of antibiotics, peptide hormones, pyrethroids, and pesticides. HYDs are classified depending on their stereoselectivity. This family also includes collapsin response regulators (CRMPs), cytosolic proteins involved in neuronal differentiation and axonal guidance which have strong homology to DHPases, but lack most of the active site residues.
Probab=100.00 E-value=7.8e-36 Score=284.91 Aligned_cols=340 Identities=21% Similarity=0.244 Sum_probs=211.7
Q ss_pred EEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhcccCCC
Q 014702 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (420)
Q Consensus 21 ~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~~~~ 100 (420)
++|+|++|++.++ ..+++|+|+||+|++|++.... + .+.++||++|++|+|||||+|+|+.+....
T Consensus 1 lli~~~~v~~~~~----~~~~~i~I~~g~I~~ig~~~~~----~-~~~~viD~~g~~vlPGlID~H~H~~~~~~~----- 66 (447)
T cd01314 1 LIIKNGTIVTADG----SFKADILIEDGKIVAIGPNLEA----P-GGVEVIDATGKYVLPGGIDPHTHLELPFMG----- 66 (447)
T ss_pred CEEECCEEECCCC----ceeeeEEEECCEEEEeeCCCCC----C-CCceEEECCCCEEecCEEeccccccccccC-----
Confidence 4799999997442 3568999999999999875321 1 246899999999999999999999542110
Q ss_pred CChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCccCH-HHHHHHHHHhCCeeEeeehhccCCCCCCc
Q 014702 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHV-SEMAKAVELLGLRACLVQSTMDCGEGLPA 179 (420)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 179 (420)
....++.+ ...+.++.+||||+++++.... ....+.......+. ......+.+....
T Consensus 67 ----------------~~~~e~~~----~~~~~a~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~- 124 (447)
T cd01314 67 ----------------TVTADDFE----SGTRAAAAGGTTTIIDFAIPNKGQSLLEAVEKWRGKA-DGKSVIDYGFHMI- 124 (447)
T ss_pred ----------------ccCcchHH----HHHHHHHhCCCcEEEeCCCCCCCCCHHHHHHHHHHHh-cCCCcccEEEEEe-
Confidence 11122211 1335567899999999874221 11112211111110 0111111110000
Q ss_pred ccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhc--
Q 014702 180 SWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTR-- 257 (420)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~-- 257 (420)
. .........+..++++ .+...++.++.++..+..+.+.+.++++.+++.++++++|+ ++........+..
T Consensus 125 -~-~~~~~~~~~~~~~l~~----~g~~~ik~~~~~~~~~~~s~~~l~~~~~~a~~~g~~v~~H~-E~~~~~~~~~~~~~~ 197 (447)
T cd01314 125 -I-TDWTDSVIEELPELVK----KGISSFKVFMAYKGLLMVDDEELLDVLKRAKELGALVMVHA-ENGDVIAELQKKLLA 197 (447)
T ss_pred -e-cCCChHHHHHHHHHHH----cCCCEEEEEeccCCCCCCCHHHHHHHHHHHHhcCCeEEEEc-CCHHHHHHHHHHHHH
Confidence 0 0011222333333332 34456787777777778899999999999999999999996 6554433332211
Q ss_pred -CCCC-------ChHH--------HHHHhccCCCccceeeccCCCh-hhHHHHHhcCCeE--EECccchhhc--------
Q 014702 258 -KVDH-------GTVT--------FLDKIEFLQNNLLSAHTVWVNH-TEIGLLSRAGVKV--SHCPASAMRM-------- 310 (420)
Q Consensus 258 -~~~~-------~~~~--------~l~~~~~~~~~~~~~h~~~~~~-~~~~~~~~~~~~~--~~~p~~~~~~-------- 310 (420)
+... .+.. .+.....++.+..+.|...... +.++.+++.|+.+ .+||.+....
T Consensus 198 ~g~~~~~~~~~~~p~~~e~~~v~~~~~la~~~~~~~~~~H~s~~~~~~~i~~~k~~g~~v~~~~~ph~l~~~~~~~~~~~ 277 (447)
T cd01314 198 QGKTGPEYHALSRPPEVEAEATARAIRLAELAGAPLYIVHVSSKEAADEIARARKKGLPVYGETCPQYLLLDDSDYWKDW 277 (447)
T ss_pred cCCCChHHhhhcCCHHHHHHHHHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHCCCeEEEecCchhheeCHHHhcccc
Confidence 1110 1111 1233445666666777764322 3577778788654 6899873211
Q ss_pred -cC-----ccc---------HHHHHHcCCcEEEccCCCCCCCCCCHHH--------------HHHHHHHHhcccccccCC
Q 014702 311 -LG-----FAP---------IKEMLHADICVSLGTDGAPSNNRMSIVD--------------EMYLASLINKGREVFANG 361 (420)
Q Consensus 311 -~~-----~~~---------~~~~~~~gv~~~lgsD~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~ 361 (420)
.+ .+| +.+++++|+.++|||||.+++...+++. +++...++++..
T Consensus 278 ~~g~~~~~~pplr~~~~~~~l~~~l~~G~i~~igsDh~~~~~~~k~~~~~~~~~~~~G~~g~e~~l~~l~~~~~------ 351 (447)
T cd01314 278 FEGAKYVCSPPLRPKEDQEALWDGLSSGTLQTVGSDHCPFNFAQKARGKDDFTKIPNGVPGVETRMPLLWSEGV------ 351 (447)
T ss_pred ccccceEECCCCCChHHHHHHHHHHhCCCeeEEECCCCCCCHHHhhcccCCHhhCCCCCchHhhhHHHHHHHHH------
Confidence 11 244 4588999999999999998754333332 455555554422
Q ss_pred CCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEcCCCCC
Q 014702 362 TTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWP 411 (420)
Q Consensus 362 ~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~ 411 (420)
....++++++++++|.|||+++|+.+++|+|++|++|||||||.+..+
T Consensus 352 --~~~~~~~~~~~~~~t~~pA~~~gl~~~~G~l~~G~~AD~vi~d~~~~~ 399 (447)
T cd01314 352 --AKGRITLEKFVELTSTNPAKIFGLYPRKGTIAVGSDADLVIWDPNAEK 399 (447)
T ss_pred --HcCCCCHHHHHHHHhhHHHHHhCCCCCCCccCCCCcCCEEEEeCCcCE
Confidence 123499999999999999999999878899999999999999988644
No 35
>PLN02942 dihydropyrimidinase
Probab=100.00 E-value=2.2e-34 Score=275.29 Aligned_cols=343 Identities=17% Similarity=0.216 Sum_probs=215.3
Q ss_pred CceEEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhccc
Q 014702 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (420)
Q Consensus 18 ~~~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~ 97 (420)
+.|++|+|++|++.++ ...++|+|+||+|++|++....+ ...++||++|++|+|||||+|+|+.+..+.
T Consensus 4 ~~~lli~~~~v~~~~~----~~~~~i~I~~g~I~~i~~~~~~~-----~~~~~iD~~g~~v~PG~ID~H~H~~~~~~~-- 72 (486)
T PLN02942 4 STKILIKGGTVVNAHH----QELADVYVEDGIIVAVAPNLKVP-----DDVRVIDATGKFVMPGGIDPHTHLAMPFMG-- 72 (486)
T ss_pred CCcEEEECcEEEcCCC----CeEeEEEEECCEEEEEcCCCCCC-----CCCeEEECCCCEEecCEeeeeeccCcccCC--
Confidence 5689999999997442 24579999999999998753211 256899999999999999999999542210
Q ss_pred CCCCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCccCH---HHHHHHHHHhCCeeEeeehhccCC
Q 014702 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHV---SEMAKAVELLGLRACLVQSTMDCG 174 (420)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~ 174 (420)
....++ +. ...+.++++||||+.++..... .+..+.......+.........
T Consensus 73 -------------------~~~~ed-~~---s~s~aAl~gGvTTv~D~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-- 127 (486)
T PLN02942 73 -------------------TETIDD-FF---SGQAAALAGGTTMHIDFVIPVNGNLLAGYEAYEKKAEKSCMDYGFHM-- 127 (486)
T ss_pred -------------------Ccccch-HH---HHHHHHHcCCCeEEEeCCCCCCCCHHHHHHHHHHHHhhcCCCEEEEE--
Confidence 111122 11 2445679999999999753211 2222221111111111111000
Q ss_pred CCCCcccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHcCCccceeccCCcchhHHHH
Q 014702 175 EGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVM 254 (420)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~ 254 (420)
+.. . .......+..+++++. +...++.++.+...+..+++.+.+.++.+++.+.++++|+ ++........
T Consensus 128 -~~~-~----~~~~~~~e~~~l~~~~---gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~Ha-E~~~~~~~~~ 197 (486)
T PLN02942 128 -AIT-K----WDDTVSRDMETLVKEK---GINSFKFFMAYKGSLMVTDELLLEGFKRCKSLGALAMVHA-ENGDAVFEGQ 197 (486)
T ss_pred -Eec-C----CcHhHHHHHHHHHHhC---CCceEEEEEecCCCCCCCHHHHHHHHHHHHhcCCeEEEEc-CCHHHHHHHH
Confidence 000 0 0111122333333322 2234676666665566788999999999999999999994 5543322221
Q ss_pred hh---cCCC-------CCh-------H-HHHHHhccCCCccceeeccCCCh-hhHHHHHhcCCeEEECccch-hh-----
Q 014702 255 DT---RKVD-------HGT-------V-TFLDKIEFLQNNLLSAHTVWVNH-TEIGLLSRAGVKVSHCPASA-MR----- 309 (420)
Q Consensus 255 ~~---~~~~-------~~~-------~-~~l~~~~~~~~~~~~~h~~~~~~-~~~~~~~~~~~~~~~~p~~~-~~----- 309 (420)
+. .+.. .++ + .++...+.++.+..+.|+.+... ++++.+++.|+.++.+|... ..
T Consensus 198 ~~~~~~G~~~~~~~~~~rP~~~E~~av~~~~~la~~~g~~~~i~H~s~~~~~e~i~~~k~~G~~Vt~e~~ph~L~l~~~~ 277 (486)
T PLN02942 198 KRMIELGITGPEGHALSRPPLLEGEATARAIRLAKFVNTPLYVVHVMSIDAMEEIARARKSGQRVIGEPVVSGLVLDDSK 277 (486)
T ss_pred HHHHHcCCCChhhhhccCCchHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHCCCcEEEEECchhheeCHHH
Confidence 11 1110 011 1 12334466778888999999887 88999999997777655431 11
Q ss_pred -------c----cCcccH---------HHHHHcCCcEEEccCCCCCCCCCCHHH--------------HHHHHHHHhccc
Q 014702 310 -------M----LGFAPI---------KEMLHADICVSLGTDGAPSNNRMSIVD--------------EMYLASLINKGR 355 (420)
Q Consensus 310 -------~----~~~~~~---------~~~~~~gv~~~lgsD~~~~~~~~~~~~--------------~~~~~~~~~~~~ 355 (420)
. .-.+|+ .++++.|+++++||||.+++...+++. ++....++.+..
T Consensus 278 ~~~~~~~~~~~~k~~PPlr~~~~~~~L~~~l~~G~i~~igTDh~p~~~~~k~~~~~~~~~~~~G~~g~e~~l~~~~~~~~ 357 (486)
T PLN02942 278 LWDPDFTIASKYVMSPPIRPAGHGKALQAALSSGILQLVGTDHCPFNSTQKAFGKDDFRKIPNGVNGIEERMHLVWDTMV 357 (486)
T ss_pred hcCcccccCcceEECCCCCCHHHHHHHHHHhcCCceEEEECCCCCCChHHhhcccCCHhhCCCCcccHHHHHHHHHHHHH
Confidence 1 113576 478899999999999998754332220 222222222111
Q ss_pred ccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEcCCCCCCCC
Q 014702 356 EVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVP 414 (420)
Q Consensus 356 ~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~ 414 (420)
....++++++++++|.|||+++|+++++|+|++|++|||+++|+++.+..+
T Consensus 358 --------~~~~i~~~~~l~~~t~~pA~~lgl~~~~G~l~~G~~ADlv~vd~~~~~~v~ 408 (486)
T PLN02942 358 --------ESGQISPTDYVRVTSTECAKIFNIYPRKGAILAGSDADIIILNPNSTFTIS 408 (486)
T ss_pred --------HcCCCCHHHHHHHHHHHHHHHhCCCCCCCCcCCCCcCCEEEEcCCccEEEc
Confidence 122499999999999999999999877899999999999999999765555
No 36
>TIGR02033 D-hydantoinase D-hydantoinase. This model represents the D-hydantoinase (dihydropyrimidinase) which primarily converts 5,6-dihydrouracil to 3-ureidopropanoate but also acts on dihydrothymine and hydantoin. The enzyme is a metalloenzyme.
Probab=100.00 E-value=1.1e-34 Score=278.21 Aligned_cols=336 Identities=17% Similarity=0.207 Sum_probs=208.6
Q ss_pred EEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhcccCCC
Q 014702 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (420)
Q Consensus 21 ~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~~~~ 100 (420)
++|+|++|+++++ ..+++|+|+||+|++|++.... + ...++||++|++|+|||||+|+|+....
T Consensus 1 ~li~n~~vv~~~~----~~~~~V~I~dg~I~~Ig~~~~~----~-~~~~vIDa~G~~vlPGlID~H~H~~~~~------- 64 (454)
T TIGR02033 1 KLIRGGTVVNADD----VFQADVLIEGGKIVAVGRNLSP----P-DAVEEIDATGKYVMPGGIDVHTHLEMPF------- 64 (454)
T ss_pred CEEECcEEEcCCC----ceEEEEEEECCEEEEecCCCCC----C-CCCcEEECCCCEEecCEecceeccCccc-------
Confidence 4799999997543 2568999999999999875321 1 2458999999999999999999995311
Q ss_pred CChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCccC----HHHHHHHHHHhCCe-eEeeehhccCCC
Q 014702 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH----VSEMAKAVELLGLR-ACLVQSTMDCGE 175 (420)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~~----~~~~~~~~~~~g~~-~~~~~~~~~~~~ 175 (420)
......++.+. ..+.++++||||+.+++... .....+........ ...........
T Consensus 65 --------------~~~~~~e~~~~----~s~~a~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 125 (454)
T TIGR02033 65 --------------GGTVTADDFFT----GTKAAAAGGTTTIIDFALPHKGESLTEALETWHEKAEGKSVIDYGFHMMI- 125 (454)
T ss_pred --------------CCCCCcchHHH----HHHHHHhCCCCEEEeCcCCCCCCCHHHHHHHHHHHhccCceEEEEEEecc-
Confidence 01112222222 23456789999999987432 22222222222111 11111110000
Q ss_pred CCCcccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHh
Q 014702 176 GLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMD 255 (420)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~ 255 (420)
+ . .......+... .+...+...+++++.++..+..+.+.+.++++.+++++.++++|+ ++.........
T Consensus 126 --~--~---~~~~~~~~~~~---~~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~-E~~~~~~~~~~ 194 (454)
T TIGR02033 126 --T--H---WNDEVLEEHIP---ELVEEGITSFKVFMAYKNLLMVDDEELFEILKRAKELGALLQVHA-ENGDVIAELQA 194 (454)
T ss_pred --c--C---CcHHHHHHHHH---HHHhcCCcEEEEEeecCCCCCCCHHHHHHHHHHHHhCCCeEEEEc-CCHHHHHHHHH
Confidence 0 0 11112222222 222334456787777777778899999999999999999999997 55443322211
Q ss_pred h---cCCC-------CChH--------HHHHHhccCCCccceeeccCC-ChhhHHHHHhcC--CeEEECccchh------
Q 014702 256 T---RKVD-------HGTV--------TFLDKIEFLQNNLLSAHTVWV-NHTEIGLLSRAG--VKVSHCPASAM------ 308 (420)
Q Consensus 256 ~---~~~~-------~~~~--------~~l~~~~~~~~~~~~~h~~~~-~~~~~~~~~~~~--~~~~~~p~~~~------ 308 (420)
. .+.. ..+. ..+.....++.+..+.|...- +.++++.+++.| +.+.+||.+..
T Consensus 195 ~~~~~G~~~~~~~~~~~p~~~e~~~v~~~~~~~~~~~~~~~i~H~s~~~~~~~i~~~~~~g~~vt~e~~p~~l~~~~~~~ 274 (454)
T TIGR02033 195 RLLAQGKTGPEYHALSRPPESEAEAVARAIALAALANAPLYVVHVSTASAVDEIAEAREKGQPVYGETCPQYLLLDDTIY 274 (454)
T ss_pred HHHHcCCCChhHhhhcCCHHHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEcCchheeecHHHh
Confidence 1 1110 0111 112223345555556665541 235677788888 44669998752
Q ss_pred -----hc---cCccc---------HHHHHHcCCcEEEccCCCCCCC----------------CCCHHHHHHHHHHHhccc
Q 014702 309 -----RM---LGFAP---------IKEMLHADICVSLGTDGAPSNN----------------RMSIVDEMYLASLINKGR 355 (420)
Q Consensus 309 -----~~---~~~~~---------~~~~~~~gv~~~lgsD~~~~~~----------------~~~~~~~~~~~~~~~~~~ 355 (420)
.. ...+| +.++++.|+.+++||||.+++. ++..+ ++....++....
T Consensus 275 ~~~~~~~~~~~~~pPlr~~~~~~~l~~~l~~G~i~~igtDh~p~~~~~k~~~~~~~~~~~~~G~~g~-e~~l~~l~~~~v 353 (454)
T TIGR02033 275 DKPGFEGAKYVCSPPLREKEDQDALWSALSSGALQTVGSDHCPFNFAQKKAIGKDDFTKIPNGGPGV-EERMTLLFDEGV 353 (454)
T ss_pred cCcccccceeEECCCCCChhhHHHHHHHhhcCCeEEEECCCCCCCHHHhhhcccCCHhhCCCCCchH-HhHHHHHHHHHH
Confidence 11 11257 5589999999999999988641 11222 445544443321
Q ss_pred ccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEcCCCCC
Q 014702 356 EVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWP 411 (420)
Q Consensus 356 ~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~ 411 (420)
. ...++++++++++|.|||+++|+++++|+|++|++|||+|+|++..+
T Consensus 354 ~--------~~~~~~~~~~~~~t~~pa~~~gl~~~~G~l~~G~~AD~~i~d~~~~~ 401 (454)
T TIGR02033 354 A--------TGRITLEKFVELTSTNPAKIFNMYPRKGTIAVGSDADIVIWDPNRTT 401 (454)
T ss_pred H--------cCCCCHHHHHHHHhhHHHHHcCCCCCCCccccCCcCCEEEEcCCcCe
Confidence 1 12489999999999999999999777899999999999999998654
No 37
>PRK12394 putative metallo-dependent hydrolase; Provisional
Probab=100.00 E-value=1.4e-33 Score=262.51 Aligned_cols=328 Identities=15% Similarity=0.171 Sum_probs=210.1
Q ss_pred CceEEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhccc
Q 014702 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (420)
Q Consensus 18 ~~~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~ 97 (420)
+++++|+|++|++ +........+|+|++|+|++|++.... ...++||++|++|+|||||+|+|+... +.
T Consensus 2 ~~~~li~~~~i~~--~~~~~~~~~~i~i~~g~I~~i~~~~~~------~~~~viD~~g~~v~PGliD~H~H~~~~---g~ 70 (379)
T PRK12394 2 KNDILITNGHIID--PARNINEINNLRIINDIIVDADKYPVA------SETRIIHADGCIVTPGLIDYHAHVFYD---GT 70 (379)
T ss_pred CccEEEECcEEEC--CCCCcccccEEEEECCEEEEEcCCCCC------CCCeEEECCCCEEECCEEEeeecCCCC---Cc
Confidence 4689999999994 333335667999999999999874311 256899999999999999999998421 10
Q ss_pred CCCCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCccC------HHHHHHHHHHhCCeeEeeehhc
Q 014702 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH------VSEMAKAVELLGLRACLVQSTM 171 (420)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~ 171 (420)
.....+ + ..++++|+||+++++... ......+..+.+++.++.....
T Consensus 71 -----------------~~~~~~-~---------~~~l~~G~Ttv~d~g~~~~~~~~~~~~~~~a~~~~gira~l~~~~~ 123 (379)
T PRK12394 71 -----------------EGGVRP-D---------MYMPPNGVTTVVDAGSAGTANFDAFYRTVICASKVRIKAFLTVSPP 123 (379)
T ss_pred -----------------ccccCH-H---------HHHHhCCccEEEECCCCCcccHHHHHHHHhhhhcceeeeEEeeecc
Confidence 001111 1 237899999999987432 1222234566778887765554
Q ss_pred cCCCCCCcccccCC-hhHHHHHHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHcCCccceeccCCcchh
Q 014702 172 DCGEGLPASWAVRT-TDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYEN 250 (420)
Q Consensus 172 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~ 250 (420)
.... ........ .....++..++++++..... .+++.+........+++.+.+.+++++++++++++|+.+.....
T Consensus 124 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~ki~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~iH~~e~~~~~ 200 (379)
T PRK12394 124 GQTW--SGYQENYDPDNIDENKIHALFRQYRNVLQ-GLKLRVQTEDIAEYGLKPLTETLRIANDLRCPVAVHSTHPVLPM 200 (379)
T ss_pred cccc--cCcccccChhHCCHHHHHHHHHHCcCcEE-EEEEEEecccccccchHHHHHHHHHHHHcCCCEEEEeCCCCccH
Confidence 2211 00000001 11112455555555433211 12232212111145688999999999999999999998754322
Q ss_pred HHHHhhcCCCCChHHHHHHhccCCCccceeeccCCC-----------hhhHHHHHhcCCeE-EECccchhhccCcccHHH
Q 014702 251 QVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN-----------HTEIGLLSRAGVKV-SHCPASAMRMLGFAPIKE 318 (420)
Q Consensus 251 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~-----------~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~ 318 (420)
.+..+.+....+..|+.+.+ .+++..++++|+.+ ..++.++. ....+.+
T Consensus 201 ----------------~~~~~~l~~g~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~g~s~~---~~~~~~~ 261 (379)
T PRK12394 201 ----------------KELVSLLRRGDIIAHAFHGKGSTILTEEGAVLAEVRQARERGVIFDAANGRSHF---DMNVARR 261 (379)
T ss_pred ----------------HHHHHhcCCCCEEEecCCCCCCCcCCCCCCChHHHHHHHhCCeEEEecCCcccc---chHHHHH
Confidence 12233344445677887633 23567788889876 55665542 2234568
Q ss_pred HHHcCC-cEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccC
Q 014702 319 MLHADI-CVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAG 397 (420)
Q Consensus 319 ~~~~gv-~~~lgsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G 397 (420)
++++|+ ++++|||+.+++...+++..+.. .+.+.. ..+++++++++++|.|||+++|+++++|+|++|
T Consensus 262 ~l~~G~~~~~lgTD~~~~~~~~~~~~~l~~--~~~~~~---------~~~~~~~~~~~~at~~~a~~~g~~~~~G~i~~G 330 (379)
T PRK12394 262 AIANGFLPDIISSDLSTITKLAWPVYSLPW--VLSKYL---------ALGMALEDVINACTHTPAVLMGMAAEIGTLAPG 330 (379)
T ss_pred HHHCCCCceEEECCCCCCCcccCccchHHH--HHHHHH---------HcCCCHHHHHHHHHHHHHHHhCCCCCCCccCCC
Confidence 889995 89999999886544343333322 222211 245999999999999999999997567999999
Q ss_pred ccccEEEEcCCCCCCCCCCC
Q 014702 398 KKADMVVVDPFSWPMVPVHD 417 (420)
Q Consensus 398 ~~ADlvv~d~~~~~~~~~~~ 417 (420)
+.|||+++|.+.... +..|
T Consensus 331 ~~ADl~~~~~~~~~~-~~~d 349 (379)
T PRK12394 331 AFADIAIFKLKNRHV-EFAD 349 (379)
T ss_pred CccCEEEEecCcCcc-eecc
Confidence 999999999987654 4444
No 38
>COG1228 HutI Imidazolonepropionase and related amidohydrolases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.5e-34 Score=265.83 Aligned_cols=353 Identities=20% Similarity=0.267 Sum_probs=217.0
Q ss_pred CceEEEEecEEEeecCCceeeeceeEEEECCEEEEEcCCh-hhhhhhccCCCcEEeCCCcEEeecccccccccchhhhcc
Q 014702 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSA-DILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (420)
Q Consensus 18 ~~~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~-~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~ 96 (420)
...+++.+++.+++ ...++++.|+|+||||++|++.. +.+ .+.++||++|++|+|||||+|+|+.....+.
T Consensus 9 ~~~~~~~~~~~~~~---~~~i~~~~v~i~~GkI~~vg~~~~~~~-----~~~~viD~~G~~V~PGLID~HtHl~~~~~~~ 80 (406)
T COG1228 9 IAMLATLAGRGLPG---LGIIEDGAVLIEDGKIVAVGPEEIDIP-----AGAEVIDAKGKTVTPGLIDAHTHLGFGGSRG 80 (406)
T ss_pred hhhheeeccccCCC---cceeecceEEEECCEEEEecCcccCCC-----CCCeEEeCCCCEEccceeeccccccccCCcc
Confidence 35577888888743 34556799999999999999873 322 4689999999999999999999998755443
Q ss_pred cC-----CCCChHHHhh--hccccccCCCCh---HHHHHHHHHHHHHHHhCCcceeeeCCccCHHH-----HHHHHHHhC
Q 014702 97 IA-----DDVDLMTWLH--DRIWPYESNMTE---EDSYISTLLCGIELIHSGVTCFAEAGGQHVSE-----MAKAVELLG 161 (420)
Q Consensus 97 ~~-----~~~~~~~~~~--~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~Gvtt~~~~~~~~~~~-----~~~~~~~~g 161 (420)
.. ...++...+. +..++....++. ..........+..++..|+|+.....+..... ..+......
T Consensus 81 ~~~~~~~~~~~~~~i~~~~~gi~~~~~~~~~a~~~g~~~~~~~~l~~~~~~g~~~~e~~~~~g~~~~~e~~~~~~~~~~~ 160 (406)
T COG1228 81 GEFELREAGASYTEILAAGGGILPLDRGFTTARDGGLKATALPRLKRAGSAGVTTGERKSGYGLDLETEGGHLRAAAGLK 160 (406)
T ss_pred chhhhcccCccHHHHHHhcCChhhhHHHHHHHhhcchHHHHHHHHHHHHHcCCcccceeeeecccccccccccchhhhcc
Confidence 21 1222222211 111111111111 11122344566788899999875543222111 111111111
Q ss_pred --CeeEeeehhccCCCCCCcccccCChhHHHHHHHHHHHHhcCCCCCceEEEEe-eccccccCHHHHHHHHHHHHHcCCc
Q 014702 162 --LRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFG-IRQIMNATDRLLLETRDMAREFKTG 238 (420)
Q Consensus 162 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~l~~~~~~a~~~~~~ 238 (420)
........+. ...+.+..+. .....++.....++...... .+.-... .......+++++.++++.+.+.+++
T Consensus 161 ~~~~~~~~~t~~-~~~~~~~~~~-~~r~~~~~g~~~~i~~~a~~---~l~~~~d~~~~~~~fs~~e~~~~l~~a~~~g~~ 235 (406)
T COG1228 161 ESRPVAVGSTPL-AAHGVPEERK-ATREAYVAGARLLIKIVATG---GLASFVDAFCEGGQFSPEEIRAVLAAALKAGIP 235 (406)
T ss_pred ccccccccCccc-cccCCccccc-chHHHHHHHHHHHHHHHHhc---cccchhhccccccccCHHHHHHHHHHHHHCCCc
Confidence 1111111111 1122222222 12333443333322222211 1111111 2223456788889999999999999
Q ss_pred cceeccCCcchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCCChhhHHHHHh--cCCe-EEECccchhhc--cCc
Q 014702 239 IHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSR--AGVK-VSHCPASAMRM--LGF 313 (420)
Q Consensus 239 v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~~~~~~~--~~~~-~~~~p~~~~~~--~~~ 313 (420)
+.+|+.+........ ..+ ...+.|+..++++....+++ .|+. ....|...... ...
T Consensus 236 v~~HA~~~~g~~~A~---------------~~g----~~s~~H~~~ld~~~~~~~a~~~~g~~~~~l~p~~~~~l~e~~~ 296 (406)
T COG1228 236 VKAHAHGADGIKLAI---------------RLG----AKSAEHGTLLDHETAALLAEKGAGTPVPVLLPRTKFELRELDY 296 (406)
T ss_pred eEEEecccchHHHHH---------------HhC----cceehhhhhcCHhHHHHHhhccCCCccccccchhhhhhhcccc
Confidence 999998765211111 111 12368999999999999999 7763 34555544333 446
Q ss_pred ccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccc
Q 014702 314 APIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGS 393 (420)
Q Consensus 314 ~~~~~~~~~gv~~~lgsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~ 393 (420)
.+++.+.+.|++++++||+++.+...++..++..+.. .+||++|||+++|.|||++||+++++|+
T Consensus 297 ~~~~~l~~~GV~vai~TD~~~~~~~~~l~~~m~l~~~---------------~gmtp~EaL~a~T~naA~alG~~~~~Gs 361 (406)
T COG1228 297 KPARKLIDAGVKVAIGTDHNPGTSHGSLALEMALAVR---------------LGMTPEEALKAATINAAKALGLADKVGS 361 (406)
T ss_pred hhHHHHHHCCCEEEEEcCCCCCchhhHHHHHHHHHHH---------------cCCCHHHHHHHHHHHHHHHcCCcccccc
Confidence 7899999999999999999886432233334433322 2499999999999999999999999999
Q ss_pred cccCccccEEEEcCCCCCCCCCCC
Q 014702 394 LEAGKKADMVVVDPFSWPMVPVHD 417 (420)
Q Consensus 394 l~~G~~ADlvv~d~~~~~~~~~~~ 417 (420)
|++||+|||||||.||+...+|..
T Consensus 362 le~Gk~ADlvv~~~dp~~~i~y~~ 385 (406)
T COG1228 362 LEPGKDADLVVWDGDPLADIPYFL 385 (406)
T ss_pred ccCCCccCEEEEcCCChhhccccc
Confidence 999999999999999977765543
No 39
>PRK08323 phenylhydantoinase; Validated
Probab=100.00 E-value=2.8e-34 Score=275.37 Aligned_cols=333 Identities=18% Similarity=0.184 Sum_probs=205.5
Q ss_pred ceEEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhcccC
Q 014702 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (420)
Q Consensus 19 ~~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~~ 98 (420)
+|++|+|++|++.+ + ..+++|+|+||+|++|++. .+.++||++|++|+|||||+|+|+....
T Consensus 1 ~d~li~n~~v~~~~--~--~~~~~v~I~~g~I~~i~~~---------~~~~viD~~g~~v~PGlID~H~H~~~~~----- 62 (459)
T PRK08323 1 MSTLIKNGTVVTAD--D--TYKADVLIEDGKIAAIGAN---------LGDEVIDATGKYVMPGGIDPHTHMEMPF----- 62 (459)
T ss_pred CcEEEECCEEEcCC--C--ceEEEEEEECCEEEEEecC---------CCceEEECCCCEEeccEEeeeecccccc-----
Confidence 36899999999643 2 3568999999999999874 1568999999999999999999994310
Q ss_pred CCCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCccC----HHHHHHHHHHhCC-eeEeeehhccC
Q 014702 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH----VSEMAKAVELLGL-RACLVQSTMDC 173 (420)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~~----~~~~~~~~~~~g~-~~~~~~~~~~~ 173 (420)
......++.. ...+.++.+||||+++++... ..+..+....... ...........
T Consensus 63 ----------------~~~~~~e~~~----~~~~~a~~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 122 (459)
T PRK08323 63 ----------------GGTVSSDDFE----TGTRAAACGGTTTIIDFALQPKGQSLREALEAWHGKAAGKAVIDYGFHMI 122 (459)
T ss_pred ----------------CCccccCcHH----HHHHHHHhCCCCEEEeCcCCCCCCChHHHHHHHHHHhccCceEEEEEEEE
Confidence 0011111111 123456789999999976322 2222222221111 11111111000
Q ss_pred CCCCCcccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHcCCccceeccCCcchhHHH
Q 014702 174 GEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVV 253 (420)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~ 253 (420)
. .......+.+..+++ ..+...+++++.+...+..+.+.+.++++.+++++.++++|+ ++.......
T Consensus 123 ---~-----~~~~~~~~~~~~~~~----~~g~~~ik~~~~~~~~~~~s~~~l~~~~~~a~~~g~~v~~H~-e~~~~~~~~ 189 (459)
T PRK08323 123 ---I-----TDWNEVVLDEMPELV----EEGITSFKLFMAYKGALMLDDDELLRALQRAAELGALPMVHA-ENGDAIAYL 189 (459)
T ss_pred ---e-----cCCcHHHHHHHHHHH----HcCCCEEEEEEecCCCCCCCHHHHHHHHHHHHhcCCEEEEEc-CChHHHHHH
Confidence 0 001122233333333 233345777766666677899999999999999999999996 544332222
Q ss_pred Hhhc---CC-------CCChHH--------HHHHhccCCCccceeeccCC-ChhhHHHHHhcCCe--EEECcc------c
Q 014702 254 MDTR---KV-------DHGTVT--------FLDKIEFLQNNLLSAHTVWV-NHTEIGLLSRAGVK--VSHCPA------S 306 (420)
Q Consensus 254 ~~~~---~~-------~~~~~~--------~l~~~~~~~~~~~~~h~~~~-~~~~~~~~~~~~~~--~~~~p~------~ 306 (420)
.+.. +. ...+.. .+.....++.+..+.|.... +-+.++.+++.|+. +.+||. .
T Consensus 190 ~~~~~~~g~~~~~~~~~~~p~~~e~~~v~~~~~~a~~~~~~~~i~H~s~~~~~~~i~~ak~~g~~vt~e~~p~~l~l~~~ 269 (459)
T PRK08323 190 QAKLLAEGKTGPEYHALSRPPEVEGEATNRAIMLAELAGAPLYIVHVSCKEALEAIRRARARGQRVFGETCPQYLLLDES 269 (459)
T ss_pred HHHHHHcCCCChhhhhccCCHHHHHHHHHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHCCCeEEEEcCccceeecHH
Confidence 2110 11 001211 23444556666666666532 22356777888865 558998 4
Q ss_pred hhhcc----C-----ccc---------HHHHHHcCCcEEEccCCCCCCCCCCHH---------------HHHHHHHHHhc
Q 014702 307 AMRML----G-----FAP---------IKEMLHADICVSLGTDGAPSNNRMSIV---------------DEMYLASLINK 353 (420)
Q Consensus 307 ~~~~~----~-----~~~---------~~~~~~~gv~~~lgsD~~~~~~~~~~~---------------~~~~~~~~~~~ 353 (420)
++... + .+| +.+++++|+.++++|||.|++...+.+ .++....++..
T Consensus 270 ~~~~~~~~~g~~~k~~pPlr~~~~~~~l~~~l~~G~i~~i~sDh~p~~~~~~~~~~~~~~~~~p~G~~~~e~~~~~l~~~ 349 (459)
T PRK08323 270 EYDGPDWFEGAKYVMSPPLRDKEHQDALWRGLQDGDLQVVATDHCPFCFEQKKQLGRGDFTKIPNGTPGVEDRMPLLFSE 349 (459)
T ss_pred HhcCCccccccceEECCCCCChHHHHHHHHHhhcCCeeEEECCCCCCChHHhcccccCCHhhCCCCcchHhhhHHHHHHH
Confidence 43221 2 244 568899999999999999875322221 23333333322
Q ss_pred ccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEcCCCC
Q 014702 354 GREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSW 410 (420)
Q Consensus 354 ~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~ 410 (420)
.. ....++++++++++|.|||+++|+.+++|+|++|++|||||||++..
T Consensus 350 ~~--------~~~~~~~~~~~~~~t~~pA~~lgl~~~~G~l~~G~~ADlvi~d~~~~ 398 (459)
T PRK08323 350 GV--------MTGRITLNRFVELTSTNPAKIFGLYPRKGTIAVGADADIVIWDPNAT 398 (459)
T ss_pred HH--------HcCCCCHHHHHHHHhhHHHHHhCCCCCCcccCCCCcCCEEEEcCCcc
Confidence 11 11349999999999999999999966689999999999999998853
No 40
>PRK05985 cytosine deaminase; Provisional
Probab=100.00 E-value=2.3e-33 Score=262.88 Aligned_cols=349 Identities=16% Similarity=0.176 Sum_probs=221.5
Q ss_pred CceEEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhccc
Q 014702 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (420)
Q Consensus 18 ~~~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~ 97 (420)
+.+++|+|++|++ +. ..+|+|++|+|++|++....+ .+.++||++|++|+|||||+|+|+........
T Consensus 1 ~~~~~i~~~~i~~--~~-----~~~v~i~~g~i~~i~~~~~~~-----~~~~~id~~g~~v~Pg~iD~h~h~~~~~~~~~ 68 (391)
T PRK05985 1 MTDLLFRNVRPAG--GA-----AVDILIRDGRIAAIGPALAAP-----PGAEVEDGGGALALPGLVDGHIHLDKTFWGDP 68 (391)
T ss_pred CCCEEEECcEECC--CC-----eeEEEEECCEEEEecCCCCCC-----CCCcEEECCCCEEecceEeeEEccCccccCCc
Confidence 3578999999995 32 349999999999999864321 25679999999999999999999976433211
Q ss_pred ----CCCCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCc-------cCHHHHHHHHHHhCCeeEe
Q 014702 98 ----ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-------QHVSEMAKAVELLGLRACL 166 (420)
Q Consensus 98 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~-------~~~~~~~~~~~~~g~~~~~ 166 (420)
....++.+++....- ...+...+....+.....+++++|+|+++++-. ....+..+......-+..+
T Consensus 69 ~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~a~~~~~~~l~~G~t~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (391)
T PRK05985 69 WYPNEPGPSLRERIANERR--RRAASGHPAAERALALARAAAAAGTTAMRSHVDVDPDAGLRHLEAVLAARETLRGLIDI 146 (391)
T ss_pred cccCCCCCCHHHHHHHHHH--hhccchhHHHHHHHHHHHHHHhcCcceEEeeEccCCCcccchHHHHHHHHHHhhCcccE
Confidence 112223333321100 113344466667777889999999999876431 1133444443332222211
Q ss_pred eehhccCCCCCCcccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHcCCccceeccCC
Q 014702 167 VQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEI 246 (420)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~ 246 (420)
....+ ...+. + .... ..+.+++....+.+ +...+.++.....+++.+.+++++|+++|+++++|+.+.
T Consensus 147 ~~v~~-~~~g~---~--~~~~-----~~~ll~~~l~~g~~-~~gg~~p~~~~~~~~~~l~~~~~~A~~~g~~i~~Hv~e~ 214 (391)
T PRK05985 147 QIVAF-PQSGV---L--SRPG-----TAELLDAALRAGAD-VVGGLDPAGIDGDPEGQLDIVFGLAERHGVGIDIHLHEP 214 (391)
T ss_pred EEEec-cCccc---c--CCcC-----HHHHHHHHHHcCCC-EEeCCCCCCcCCCHHHHHHHHHHHHHHhCCCcEEeeCCC
Confidence 11111 01111 0 0000 11333333333333 222244555667788999999999999999999999876
Q ss_pred cchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCCC---h----hhHHHHHhcCCeEEECccchhhccCcccHHHH
Q 014702 247 PYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN---H----TEIGLLSRAGVKVSHCPASAMRMLGFAPIKEM 319 (420)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~---~----~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 319 (420)
......... ...+.....+. ..+..+.|+..++ + +.++++++.++.+++|+... .+.+|++++
T Consensus 215 ~d~~~~~~~------~~~e~~~~~g~-~~~~~i~H~~~l~~~~~~~~~~~i~~lae~g~~v~~~~~~~---~~~~~~~~l 284 (391)
T PRK05985 215 GELGAFQLE------RIAARTRALGM-QGRVAVSHAFCLGDLPEREVDRLAERLAEAGVAIMTNAPGS---VPVPPVAAL 284 (391)
T ss_pred CCccHHHHH------HHHHHHHHhCC-CCCEehhhhhhhhcCCHHHHHHHHHHHHHcCCeEEEeCCCC---CCCCCHHHH
Confidence 432111110 01222223333 2357889987653 3 44789999999998886543 677899999
Q ss_pred HHcCCcEEEccCCCCCC----CCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccc
Q 014702 320 LHADICVSLGTDGAPSN----NRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLE 395 (420)
Q Consensus 320 ~~~gv~~~lgsD~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~ 395 (420)
.+.|+++++|||++..+ ...++++.++.+....+.. ..-++.++++++|.|+|+++|+++ ++|+
T Consensus 285 ~~~Gv~v~lGtD~~~~~~~p~~~~~~~~~~~~~~~~~~~~----------~~~~~~~al~~~T~~~A~~lg~~~--~~l~ 352 (391)
T PRK05985 285 RAAGVTVFGGNDGIRDTWWPYGNGDMLERAMLIGYRSGFR----------TDDELAAALDCVTHGGARALGLED--YGLA 352 (391)
T ss_pred HHCCCeEEEecCCCCCCCcCCCCCcHHHHHHHHHHHHccC----------ChHHHHHHHHHHcchhHHHhCCcc--cCCC
Confidence 99999999999985321 3457887776554433211 112468999999999999999975 4599
Q ss_pred cCccccEEEEcCCCCCCCC
Q 014702 396 AGKKADMVVVDPFSWPMVP 414 (420)
Q Consensus 396 ~G~~ADlvv~d~~~~~~~~ 414 (420)
+||.||||++|.+++...+
T Consensus 353 ~G~~ADlvvld~~~~~~~~ 371 (391)
T PRK05985 353 VGARADFVLVDAETVAEAV 371 (391)
T ss_pred CCCcCCEEEECCCCHHHHH
Confidence 9999999999998765333
No 41
>PRK07583 cytosine deaminase-like protein; Validated
Probab=100.00 E-value=2.1e-32 Score=259.05 Aligned_cols=357 Identities=18% Similarity=0.161 Sum_probs=223.7
Q ss_pred CCCCceEEEEecEEEeecCCc--------eeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccc
Q 014702 15 LGSSSTMILHNAVIVTMDKES--------RVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTH 86 (420)
Q Consensus 15 ~~~~~~~li~n~~v~~~d~~~--------~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H 86 (420)
.+++..++|+|+++-+..... ......+|.|+||||++|++....+ .+.++||++|++|+|||||+|
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~dg~i~~i~~~~~~~-----~~~~~id~~g~~v~Pg~id~H 81 (438)
T PRK07583 7 LPESGRYWLKNARVPAALLEGGVPPGDTLEGLVLVDIEIADGKIAAILPAGGAP-----DELPAVDLKGRMVWPCFVDMH 81 (438)
T ss_pred CCCCCcEEEeccccccccccCccCCCcCCCCcEEEEEEEECCEEEEEecCCCCC-----CCCceecCCCCcccCCcccce
Confidence 345678999999864432111 2234669999999999999864311 367899999999999999999
Q ss_pred cccchhhhccc--CCCCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceee---eC-Cc---cCHHHHHHHH
Q 014702 87 VHTSQQLAKGI--ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFA---EA-GG---QHVSEMAKAV 157 (420)
Q Consensus 87 ~H~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~---~~-~~---~~~~~~~~~~ 157 (420)
+|+......+. ....++.+.+..........+..++...........++..|+|+++ +. .. ...+...+..
T Consensus 82 ~Hld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~a~~~Gtt~vRt~vd~~~~~~~~~~~~i~~~~ 161 (438)
T PRK07583 82 THLDKGHIWPRSPNPDGTFPGALDAVTADREAHWSAEDLYRRMEFGLRCAYAHGTSAIRTHLDSFAPQAAISWEVFAELR 161 (438)
T ss_pred eccccceecCCCCCCCCCHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHhChhhEEeeeccCCCCcccHHHHHHHHH
Confidence 99987654432 1222233332211111112334455555566788899999999554 42 11 1122232333
Q ss_pred HHhCCeeEeeehhccCCCCCCcccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHcCC
Q 014702 158 ELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKT 237 (420)
Q Consensus 158 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~ 237 (420)
....-+...........++... .. . .+..+.+.+ . .+.++... .......+.+.+++++|+++|+
T Consensus 162 ~~~~~~~~~~~v~~~p~~~~~~-----~~--~-~eL~~~v~~---~-~gv~g~~~---~~~~~~d~~l~~i~~lA~~~G~ 226 (438)
T PRK07583 162 EAWAGRIALQAVSLVPLDAYLT-----DA--G-ERLADLVAE---A-GGLLGGVT---YMNPDLDAQLDRLFRLARERGL 226 (438)
T ss_pred HHhhccCeEEEEEecChhhccC-----ch--H-HHHHHHHHH---c-CCEEeCCC---CCCCCHHHHHHHHHHHHHHhCC
Confidence 3332222111111111111110 11 1 222222222 1 12222211 1111256789999999999999
Q ss_pred ccceeccCCcchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCCC-------hhhHHHHHhcCCeEEECccchhhc
Q 014702 238 GIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN-------HTEIGLLSRAGVKVSHCPASAMRM 310 (420)
Q Consensus 238 ~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~-------~~~~~~~~~~~~~~~~~p~~~~~~ 310 (420)
++.+|+.+........... ..+.....+. ..+.++.|+..++ .+.++++++.|+.+++||.++...
T Consensus 227 ~v~vH~~E~~~~~~~~l~~------~~~~~~~~G~-~~~v~i~H~~~l~~~~~~~~~~~i~~la~~gv~vv~~P~~~~~l 299 (438)
T PRK07583 227 DLDLHVDETGDPASRTLKA------VAEAALRNGF-EGKVTCGHCCSLAVQPEEQAQATIALVAEAGIAIVSLPMCNLYL 299 (438)
T ss_pred CcEEeECCCCCchHHHHHH------HHHHHHHhCC-CCCEEEEeccchhcCCHHHHHHHHHHHHHcCCeEEECcchhhhh
Confidence 9999998754432211110 1222333343 3468899999877 367999999999999999987533
Q ss_pred -----------cCcccHHHHHHcCCcEEEccCCCCC---C-CCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHH
Q 014702 311 -----------LGFAPIKEMLHADICVSLGTDGAPS---N-NRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLR 375 (420)
Q Consensus 311 -----------~~~~~~~~~~~~gv~~~lgsD~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~ 375 (420)
.+..|++++.+.|+++++|||+... + ...++++.+..+....+ .+.+++++++
T Consensus 300 ~~~~~~~~p~~~~~~~v~~l~~aGV~valGtD~~~d~~~p~g~~~~~~~~~~a~~~~~------------~~~~~~~al~ 367 (438)
T PRK07583 300 QDRQPGRTPRWRGVTLVHELKAAGIPVAVASDNCRDPFYAYGDHDMLEVFREAVRILH------------LDHPYDDWPA 367 (438)
T ss_pred cCCCcCCCCCCCCcchHHHHHHCCCeEEEEeCCCCCCCCCCCCcCHHHHHHHHHHHHh------------cCCcHHHHHH
Confidence 2456899999999999999998531 1 23567777776654321 1378999999
Q ss_pred HHhHHHHHHccCCCcccccccCccccEEEEcCCCCC
Q 014702 376 MATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWP 411 (420)
Q Consensus 376 ~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~ 411 (420)
++|.|||+++|+++ +|+|++|+.|||||+|.+++.
T Consensus 368 ~~T~~~A~~lg~~~-~G~i~~G~~ADlvv~d~~~~~ 402 (438)
T PRK07583 368 AVTTTPADIMGLPD-LGRIAVGAPADLVLFKARSFS 402 (438)
T ss_pred HHhHHHHHHcCCCC-CCCcCCCCCCCEEEEcCCCHH
Confidence 99999999999976 799999999999999999864
No 42
>cd01299 Met_dep_hydrolase_A Metallo-dependent hydrolases, subgroup A is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=100.00 E-value=1.6e-32 Score=253.69 Aligned_cols=294 Identities=19% Similarity=0.178 Sum_probs=196.1
Q ss_pred CcEEeCCCcEEeecccccccccchhhhcccCCCCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCc
Q 014702 68 DQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG 147 (420)
Q Consensus 68 ~~~iD~~g~~v~PGfID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~ 147 (420)
+++||++|++|||||||+|+|+...... ...+ ....+...........+.++.+||||++++++
T Consensus 1 ~~vID~~g~~v~PGliD~H~Hl~~~~~~-------~~~~---------~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~g~ 64 (342)
T cd01299 1 AQVIDLGGKTLMPGLIDAHTHLGSDPGD-------LPLD---------LALPVEYRTIRATRQARAALRAGFTTVRDAGG 64 (342)
T ss_pred CcEEeCCCCEECCCeeeeeeeccccCCC-------cccc---------ccCCHHHHHHHHHHHHHHHHhCCCcEEEeCCC
Confidence 3689999999999999999998542110 0000 00122222334445778899999999999986
Q ss_pred cCHHHHHHHHHH----hCCeeEeeehhccCCCCCCccc---------ccCChhHHHHHHHHHHHHhcCCCCCceEEEEee
Q 014702 148 QHVSEMAKAVEL----LGLRACLVQSTMDCGEGLPASW---------AVRTTDDCIQSQKELYAKHHHAADGRIRIWFGI 214 (420)
Q Consensus 148 ~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 214 (420)
..... .+.... .|.+.+..........+..... .........++....++++.+.+...+|++...
T Consensus 65 ~~~~~-~~~~~~~g~~~gPr~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~G~~~iK~~~~g 143 (342)
T cd01299 65 ADYGL-LRDAIDAGLIPGPRVFASGRALSQTGGHGDPRGLSGLFPAGGLAAVVDGVEEVRAAVREQLRRGADQIKIMATG 143 (342)
T ss_pred cchHH-HHHHHHcCCccCCceeecchhhcccCCCCccccccccccccCCcceecCHHHHHHHHHHHHHhCCCEEEEeccC
Confidence 54433 333333 3444444332222111111100 000111223444555666666788899987643
Q ss_pred cc--------ccccCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCCC
Q 014702 215 RQ--------IMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN 286 (420)
Q Consensus 215 ~~--------~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~ 286 (420)
.. ....+++.+..+++.++++|+++.+|+.+..... .+++ .+ ...++|+..++
T Consensus 144 ~~~~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~~~~i~--------------~~l~-~G----~~~i~H~~~~~ 204 (342)
T cd01299 144 GVLSPGDPPPDTQFSEEELRAIVDEAHKAGLYVAAHAYGAEAIR--------------RAIR-AG----VDTIEHGFLID 204 (342)
T ss_pred CcCCCCCCCcccCcCHHHHHHHHHHHHHcCCEEEEEeCCHHHHH--------------HHHH-cC----CCEEeecCCCC
Confidence 21 1246889999999999999999999997532111 1111 11 23579999999
Q ss_pred hhhHHHHHhcCCeEEECccchhh----------------------ccCcccHHHHHHcCCcEEEccCCCC-CCCCCCHHH
Q 014702 287 HTEIGLLSRAGVKVSHCPASAMR----------------------MLGFAPIKEMLHADICVSLGTDGAP-SNNRMSIVD 343 (420)
Q Consensus 287 ~~~~~~~~~~~~~~~~~p~~~~~----------------------~~~~~~~~~~~~~gv~~~lgsD~~~-~~~~~~~~~ 343 (420)
++++++++++|+.++.||.+... .....+++++.+.|+++++|||.+. .....+++.
T Consensus 205 ~~~~~~l~~~g~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~GTD~~~~~~~~~~~~~ 284 (342)
T cd01299 205 DETIELMKEKGIFLVPTLATYEALAAEGAAPGLPADSAEKVALVLEAGRDALRRAHKAGVKIAFGTDAGFPVPPHGWNAR 284 (342)
T ss_pred HHHHHHHHHCCcEEeCcHHHHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCCCCCCCchhHHHH
Confidence 99999999999999999876432 1234678899999999999999874 222334555
Q ss_pred HHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEcCCCCCC
Q 014702 344 EMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPM 412 (420)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~ 412 (420)
++..... .++|++++++++|.|||+++|+++++|+|++||.|||+|+|.||++.
T Consensus 285 e~~~~~~---------------~~~~~~~al~~~T~~~a~~~g~~~~~G~i~~G~~ADlvvl~~~pl~d 338 (342)
T cd01299 285 ELELLVK---------------AGGTPAEALRAATANAAELLGLSDELGVIEAGKLADLLVVDGDPLED 338 (342)
T ss_pred HHHHHHH---------------hCCCHHHHHHHHHHHHHHHhCccCCcceECCCCcCCEEEECCChhhh
Confidence 5544321 24899999999999999999998889999999999999999998764
No 43
>cd01297 D-aminoacylase D-aminoacylases (N-acyl-D-Amino acid amidohydrolases) catalyze the hydrolysis of N-acyl-D-amino acids to produce the corresponding D-amino acids, which are used as intermediates in the synthesis of pesticides, bioactive peptides, and antibiotics.
Probab=100.00 E-value=7.8e-32 Score=253.70 Aligned_cols=328 Identities=18% Similarity=0.181 Sum_probs=200.0
Q ss_pred eEEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhcccCC
Q 014702 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (420)
Q Consensus 20 ~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~~~ 99 (420)
|++|+|++|++ +.+.....++|.|+||+|++|++.... .+.++||++|++|+|||||+|+|+....
T Consensus 1 d~~i~n~~v~~--~~~~~~~~~~i~I~~g~I~~i~~~~~~------~~~~~iD~~G~~v~PG~iD~H~H~~~~~------ 66 (415)
T cd01297 1 DLVIRNGTVVD--GTGAPPFTADVGIRDGRIAAIGPILST------SAREVIDAAGLVVAPGFIDVHTHYDGQV------ 66 (415)
T ss_pred CEEEECCEEEC--CCCCccccceEEEECCEEEEEecCCCC------CCCeEEECCCCEEccCEeeeeecCCccc------
Confidence 57899999995 434445678999999999999875321 3568999999999999999999994311
Q ss_pred CCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCcc-------------------------------
Q 014702 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ------------------------------- 148 (420)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~------------------------------- 148 (420)
+.. . ..+.++.+||||++++...
T Consensus 67 ------------------~~~-~-------~~~~a~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (415)
T cd01297 67 ------------------FWD-P-------DLRPSSRQGVTTVVLGNCGVSPAPANPDDLARLIMLMEGLVALGEGLPWG 120 (415)
T ss_pred ------------------ccC-c-------chhhHHhCcEEEEEeccccCccCCCChhhhhhhhhhhhcccccccccCCC
Confidence 000 0 1234678999999885321
Q ss_pred --CHHHHHHHHHHh--CCeeEe--eehhcc-CCCCCCcccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeecccc--c
Q 014702 149 --HVSEMAKAVELL--GLRACL--VQSTMD-CGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIM--N 219 (420)
Q Consensus 149 --~~~~~~~~~~~~--g~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~ 219 (420)
......+..... .++... ...... ...|... .......+.+..+++++....+. +++..+....+ .
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~l~~~~~g~~~---~~~~~~~~~~~~~l~~~al~~Ga--~g~~~~~~y~~~~~ 195 (415)
T cd01297 121 WATFAEYLDALEARPPAVNVAALVGHAALRRAVMGLDA---REATEEELAKMRELLREALEAGA--LGISTGLAYAPRLY 195 (415)
T ss_pred CCCHHHHHHHHHhcCCCcCeeeccCcHHHHHHHhCcCC---CCCCHHHHHHHHHHHHHHHHCCC--eEEEcccccCCccc
Confidence 001112222111 121110 000000 0000000 01233445566666665444443 33322222222 5
Q ss_pred cCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCCCh----------hh
Q 014702 220 ATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH----------TE 289 (420)
Q Consensus 220 ~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~----------~~ 289 (420)
.+.+.+.++++.+++++..+.+|+.+...... .....++......+.+..+.|...... +.
T Consensus 196 ~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~e~---------~av~~~~~~a~~~g~r~~i~H~ss~~~~~~~~~~~~l~~ 266 (415)
T cd01297 196 AGTAELVALARVAARYGGVYQTHVRYEGDSIL---------EALDELLRLGRETGRPVHISHLKSAGAPNWGKIDRLLAL 266 (415)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEECcccccHH---------HHHHHHHHHHHHhCCCEEEEEEecCCCcccchHHHHHHH
Confidence 68889999999999999999999986542111 112233444445567788899887655 44
Q ss_pred HHHHHhcCCe--EEECccchhhccCcccHHHHHHcCCcEEEccCCCCCCC-CCCHHHHHHHHHHHhcccccccCCCCCCC
Q 014702 290 IGLLSRAGVK--VSHCPASAMRMLGFAPIKEMLHADICVSLGTDGAPSNN-RMSIVDEMYLASLINKGREVFANGTTDPA 366 (420)
Q Consensus 290 ~~~~~~~~~~--~~~~p~~~~~~~~~~~~~~~~~~gv~~~lgsD~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (420)
+++.++.|+. +.+||..... ..+++.+++. +.++++|||++.+. ....+.. ...++.... ....
T Consensus 267 i~~a~~~G~~v~~e~~p~~~~~---~~~~~~l~~~-~~~~i~SDh~~~~~~~~~~~~~--~~~~l~~~~-------~~~~ 333 (415)
T cd01297 267 IEAARAEGLQVTADVYPYGAGS---EDDVRRIMAH-PVVMGGSDGGALGKPHPRSYGD--FTRVLGHYV-------RERK 333 (415)
T ss_pred HHHHHHhCCcEEEEeCCCCCCc---HHHHHHHHcC-CCceeeeCCCcCCCCCcchhCC--HHHHHHHHh-------cccC
Confidence 5666665555 4577854321 3467778777 89999999988431 0011111 111111100 0112
Q ss_pred CCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEcCCCCCCCCC
Q 014702 367 ALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPV 415 (420)
Q Consensus 367 ~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~ 415 (420)
.+|++++++++|.|||+++|+++ +|+|++|++|||||||++.+...+.
T Consensus 334 ~~~~~~~~~~~t~~pA~~~gl~~-~G~l~~G~~ADlvv~d~~~~~~~~~ 381 (415)
T cd01297 334 LLSLEEAVRKMTGLPARVFGLAD-RGRIAPGYRADIVVFDPDTLADRAT 381 (415)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCC-CceeCCCCCCCEEEEcccccccccc
Confidence 39999999999999999999974 6999999999999999987654443
No 44
>PRK13309 ureC urease subunit alpha; Reviewed
Probab=100.00 E-value=8.3e-32 Score=252.94 Aligned_cols=333 Identities=17% Similarity=0.181 Sum_probs=194.7
Q ss_pred CceEEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhh--h-----hhccCCCcEEeCCCcEEeecccccccccc
Q 014702 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADIL--Q-----QFSQMADQIIDLQSQILLPGFVNTHVHTS 90 (420)
Q Consensus 18 ~~~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~--~-----~~~~~~~~~iD~~g~~v~PGfID~H~H~~ 90 (420)
..|++|+|++|+ |+... +..++|.|+||+|++|++..... . -..+.++++||++|++|+|||||+|+|+.
T Consensus 67 ~~DlVI~Ng~Vi--D~~~g-i~kaDI~IkdGrI~aIG~~~~p~~~~~v~~~~~~g~~tevIDa~G~iVtPG~ID~HvH~~ 143 (572)
T PRK13309 67 VLDLVITNVTIV--DARLG-VIKADVGIRDGKIVGIGKSGNPSTMDGVTQGMVVGVSTDAISGEHLILTAAGIDTHIHLI 143 (572)
T ss_pred cCCEEEECeEEE--cCCCC-EEEEEEEEECCEEEEecCCCccccccccccccccCCCceEEECCCCEEEeCEEEeecccC
Confidence 568999999999 44233 45789999999999999753210 0 00112478999999999999999999982
Q ss_pred hhhhcccCCCCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCcc---------------CHHHHHH
Q 014702 91 QQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ---------------HVSEMAK 155 (420)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~---------------~~~~~~~ 155 (420)
. +. . .+.++.+||||++.+|.. ....+.+
T Consensus 144 ~------------------------P~---~---------~~aAl~gGVTTvi~~G~gp~~~~n~~~~t~g~~~i~~~l~ 187 (572)
T PRK13309 144 S------------------------PQ---Q---------AYHALSNGVTTFFGGGIGPTDGTNGTTVTPGPWNIRQMLR 187 (572)
T ss_pred C------------------------cc---h---------HHHHHcCceEEEEecCCCCccCCCCCCCCCCHHHHHHHHH
Confidence 1 11 0 135789999999964311 1122333
Q ss_pred HHHHhCCeeEeeehhccCCCCCCcccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHc
Q 014702 156 AVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREF 235 (420)
Q Consensus 156 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~ 235 (420)
......+...+. +.+.. . ...+..+ +... +.+. +..+..+..+++.+.+.++.++++
T Consensus 188 ~a~~~pvn~g~~------gkg~~------~---~~~~l~e----l~~a--Ga~g--fk~~~d~g~t~~~L~~aLe~A~~~ 244 (572)
T PRK13309 188 SIEGLPVNVGIL------GKGNS------Y---GRGPLLE----QAIA--GVAG--YKVHEDWGATAAALRHALRVADEV 244 (572)
T ss_pred HhccCCcCEEEE------cCCCC------C---CHHHHHH----HHhc--CcEE--EEecCcCCcCHHHHHHHHHHHHhc
Confidence 333333332111 01111 0 0112222 2222 3333 223233356888999999999999
Q ss_pred CCccceeccCCcc--hhHHHHhhcCCCCChHHHHHHhccCCC-----------ccc--------eeeccCCChhhHHHHH
Q 014702 236 KTGIHMHVAEIPY--ENQVVMDTRKVDHGTVTFLDKIEFLQN-----------NLL--------SAHTVWVNHTEIGLLS 294 (420)
Q Consensus 236 ~~~v~~h~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~-----------~~~--------~~h~~~~~~~~~~~~~ 294 (420)
++++.+|+..... ..+... ..+..+++.++...+..+. ..+ ..+....-+|.++.+.
T Consensus 245 gv~VaiH~d~lnE~g~vE~~~--aa~~grpih~~H~~Gaggghapd~~~~~~~~~~~~~st~pt~p~~~~~~~e~~~m~m 322 (572)
T PRK13309 245 DIQVAVHTDSLNECGYVEDTI--DAFEGRTIHTFHTEGAGGGHAPDIIKVASQTNVLPSSTNPTLPYGVNSQAELFDMIM 322 (572)
T ss_pred CCEEEEeCCccccchhHHHHH--HHhCCCceeeeeccCcccCCchhHHHhcCCCCcccCCCCCCCCCcccchHhhhchhh
Confidence 9999999655332 222221 1112222222222221111 011 1111111112222211
Q ss_pred -hcCCeEEE--Ccc---chhhccCcccHHHHHHcCCcEEEccCCCCCC-CCCCHHHHHHHHHHHhcccccccCCCCCCCC
Q 014702 295 -RAGVKVSH--CPA---SAMRMLGFAPIKEMLHADICVSLGTDGAPSN-NRMSIVDEMYLASLINKGREVFANGTTDPAA 367 (420)
Q Consensus 295 -~~~~~~~~--~p~---~~~~~~~~~~~~~~~~~gv~~~lgsD~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (420)
.+...-.+ .+. +..+...+++++.+.+.|+.+++|||++..+ ...+++..++.+..++..+..........+.
T Consensus 323 ~~h~l~~~~~~D~~~a~srig~e~~~a~~~l~daGa~~~~gSD~pv~gr~~~~p~~~iq~Av~rk~~~g~l~~~~~~~~~ 402 (572)
T PRK13309 323 VCHNLNPNVPADVAFAESRVRPETIAAENVLHDMGVISMFSSDSQAMGRVGENWLRAIQTADAMKAARGKLPEDAAGNDN 402 (572)
T ss_pred hhccCCCCCCCChhHHHHhhCchhhcchhHHHhCCCEEEEcCCCCcccCCcccHHHHHHHHHHHHhccCCCCccCCCccc
Confidence 11100000 000 0112244688999999999999999998532 2457888888887664322222211122467
Q ss_pred CCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEcCCCCCCCC
Q 014702 368 LPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVP 414 (420)
Q Consensus 368 ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~ 414 (420)
+++.++|++.|.|||+++|+++++|+|++||.|||||||+++|...+
T Consensus 403 ~~v~~aL~~yT~n~A~a~g~e~~~GsLe~Gk~ADlvvld~d~f~~~~ 449 (572)
T PRK13309 403 FRVLRYVAKITINPAITQGVSHVIGSVEVGKMADLVLWEPRFFGAKP 449 (572)
T ss_pred ccHHHHHHHHhHHHHHHcCcccCccccCCCCcCCEEEEchhhcCCCc
Confidence 99999999999999999999999999999999999999999887543
No 45
>cd01300 YtcJ_like YtcJ_like metal dependent amidohydrolases. YtcJ is a Bacillus subtilis ORF of unknown function. The Arabidopsis homolog LAF3 has been identified as a factor required for photochrome A signalling.
Probab=100.00 E-value=9.3e-31 Score=252.01 Aligned_cols=176 Identities=23% Similarity=0.191 Sum_probs=133.6
Q ss_pred cccCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCCChhhHHHHHhcC
Q 014702 218 MNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAG 297 (420)
Q Consensus 218 ~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~ 297 (420)
...+++.+.++++.++++|+++++|+.+.......... ...+....+..+.+.++.|+..+++++++++++.|
T Consensus 290 ~~~~~e~l~~~~~~a~~~g~~v~~Ha~gd~~i~~~l~~-------~~~~~~~~g~~~~r~~i~H~~~~~~~~~~~l~~~g 362 (479)
T cd01300 290 LLISPEELEELVRAADEAGLQVAIHAIGDRAVDTVLDA-------LEAALKDNPRADHRHRIEHAQLVSPDDIPRFAKLG 362 (479)
T ss_pred ccCCHHHHHHHHHHHHHCCCCEEEEEecHHHHHHHHHH-------HHHHHHhcCCCCCCceeeecccCCHHHHHHHHHcC
Confidence 34578999999999999999999999864332211111 11122233445667899999999999999999999
Q ss_pred CeEEECccchh--------------hccCcccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCC
Q 014702 298 VKVSHCPASAM--------------RMLGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTT 363 (420)
Q Consensus 298 ~~~~~~p~~~~--------------~~~~~~~~~~~~~~gv~~~lgsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (420)
+.+++||.+.. +....+|++.+.+.|+++++|||+++.+ .+++..++.+.......... ...
T Consensus 363 v~~~~~P~~~~~~~~~~~~~~lg~~~~~~~~p~~~~~~~Gv~v~lGSD~~~~~--~~p~~~~~~av~~~~~~~~~--~~~ 438 (479)
T cd01300 363 VIASVQPNHLYSDGDAAEDRRLGEERAKRSYPFRSLLDAGVPVALGSDAPVAP--PDPLLGIWAAVTRKTPGGGV--LGN 438 (479)
T ss_pred CceEeCcccccCchHHHHHhcccHHHHhcCchHHHHHHCCCeeeccCCCCCCC--CCHHHHHHHHheeeCCCCCC--CCC
Confidence 99999998642 1135689999999999999999997653 57888887775432211100 001
Q ss_pred CCCCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEE
Q 014702 364 DPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVV 404 (420)
Q Consensus 364 ~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv 404 (420)
..+++|++++++++|.|||+++|+++++|+|++||.|||||
T Consensus 439 ~~~~ls~~~al~~~T~~~A~~lg~e~~~GsLe~Gk~ADlvv 479 (479)
T cd01300 439 PEERLSLEEALRAYTIGAAYAIGEEDEKGSLEPGKLADFVV 479 (479)
T ss_pred ccccCCHHHHHHHHHHHHHHHhccccccccccCCcccceeC
Confidence 34679999999999999999999999899999999999986
No 46
>TIGR01975 isoAsp_dipep isoaspartyl dipeptidase IadA. The L-isoaspartyl derivative of Asp arises non-enzymatically over time as a form of protein damage. In this isomerization, the connectivity of the polypeptide changes to pass through the beta-carboxyl of the side chain. Much but not all of this damage can be repaired by protein-L-isoaspartate (D-aspartate) O-methyltransferase. This model describes the isoaspartyl dipeptidase IadA, apparently one of two such enzymes in E. coli, an enzyme that degrades isoaspartyl dipeptides and may unblock degradation of proteins that cannot be repaired. This model also describes closely related proteins from other species (e.g. Clostridium perfringens, Thermoanaerobacter tengcongensis) that we assume to be equivalent in function. This family shows homology to dihydroorotases.
Probab=100.00 E-value=1.8e-30 Score=238.80 Aligned_cols=319 Identities=21% Similarity=0.256 Sum_probs=196.0
Q ss_pred EEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhcccCCC
Q 014702 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (420)
Q Consensus 21 ~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~~~~ 100 (420)
++|+|++|++++. +...+|+|+||||++|++..+.+..++ ....++|++|++|+|||||.|+|+...... .
T Consensus 2 ~li~n~~v~~~~~----~~~~dvlI~~gkI~~Ig~~~~~~~~~~-~~~~i~d~~G~~v~PGlID~HvH~~~gg~~----~ 72 (389)
T TIGR01975 2 TLLKGAEVYAPEY----IGKKDILIANDKIIAIADEIPSTKDFV-PNCVVVGLEGMIAVPGFIDQHVHIIGGGGE----G 72 (389)
T ss_pred EEEECcEEEcCCc----CcceeEEEECCEEEEEcCCccccccCC-CCeEEECCCCCEEccCEeehhhcccccccc----C
Confidence 5899999996532 356799999999999999765421111 122355669999999999999999642100 0
Q ss_pred CChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCc-----cC---HHHHHHHHHHhCCeeEeeehhcc
Q 014702 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-----QH---VSEMAKAVELLGLRACLVQSTMD 172 (420)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~-----~~---~~~~~~~~~~~g~~~~~~~~~~~ 172 (420)
.. ...++ + ....+++++||||++++.+ .+ ..+..++....|++.+.....++
T Consensus 73 ~~-------------~~~~~-e------~~~~e~l~~GvTTv~d~~g~~~~~~~~~~~~a~~~al~~~Gir~~~~~g~~~ 132 (389)
T TIGR01975 73 GP-------------TTRTP-E------LTLSDITKGGVTTVVGLLGTDGITRHMESLLAKARALEEEGISCYMLTGAYH 132 (389)
T ss_pred CC-------------ccCCH-H------HHHHHHHhCCcEEEecCcccCccccChhhHHHHHHHHHHhCCEEEEEccccc
Confidence 00 01112 1 1357789999999999864 22 33678899999999987755543
Q ss_pred CCCCCCcccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHcC----Cc--cceeccCC
Q 014702 173 CGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFK----TG--IHMHVAEI 246 (420)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~----~~--v~~h~~~~ 246 (420)
. |..-.. ........+.++.... -++.+.-+.....+.+.+.++.+.++..| ++ +++|....
T Consensus 133 ~----p~~t~t----~~~~~d~~~~d~iiG~----~~ia~sd~r~~~~~~~~l~~~~~~~~~~g~~~~~~g~~~vH~g~~ 200 (389)
T TIGR01975 133 V----PSRTIT----GSVESDLLLIDKVIGV----GEIAISDHRSAQPTVEHLTNMAAEARVGGLLGGKPGIVNFHVGDS 200 (389)
T ss_pred C----CCcccc----cchhhheeeehhhccc----ceEEEccCcCCCCCHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCc
Confidence 2 211111 1111111112222211 12334444556678889999999999988 88 99999876
Q ss_pred cchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCCC------hhhHHHHHhcCCeEEECccchhhc--cCcc---c
Q 014702 247 PYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN------HTEIGLLSRAGVKVSHCPASAMRM--LGFA---P 315 (420)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~------~~~~~~~~~~~~~~~~~p~~~~~~--~~~~---~ 315 (420)
....+...+. ++.. +......|..+++ ++.++.+++-+..-+..|...... .... .
T Consensus 201 ~~~l~~l~~~----------~~~~---di~~~~f~pth~~r~~~l~~~~i~~~~~gg~iDv~~~~~~~~l~~~~~~~~~~ 267 (389)
T TIGR01975 201 KRALQPIYEL----------VENT---DVPITQFLPTHINRNVPLFEAGLEFAKKGGTIDLTSSIDPQFRKEGEVAPAEG 267 (389)
T ss_pred hhhHHHHHHH----------HHhc---CCChhheecCccCCCHHHHHHHHHHHHhCCcEEEeCCCCccchhccccChHHH
Confidence 5543333221 1111 1111122333443 234566665444433333222111 2223 3
Q ss_pred HHHHHHcCCc---EEEccCCCCCCCCC---------------CHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHH
Q 014702 316 IKEMLHADIC---VSLGTDGAPSNNRM---------------SIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMA 377 (420)
Q Consensus 316 ~~~~~~~gv~---~~lgsD~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~ 377 (420)
++.+.++|+. ++++||+..+.+.. +++.+++.+... .+++++++++++
T Consensus 268 ~~~~~~~Gv~~~~i~isSD~~gs~p~~~~~g~~~~~g~g~~~sl~~~~~~lv~~--------------g~ls~~eal~~~ 333 (389)
T TIGR01975 268 IKKALEAGVPLEKVTFSSDGNGSQPFFDENGELTGLGVGSFETLFEEVREAVKD--------------GDVPLEKALRVI 333 (389)
T ss_pred HHHHHHcCCCcceEEEEeCCCCCCCccccccccccCCcCcHHHHHHHHHHHHHh--------------CCCCHHHHHHHH
Confidence 4788999987 49999975321111 223444433221 249999999999
Q ss_pred hHHHHHHccCCCcccccccCccccEEEEcCC
Q 014702 378 TINGAKSVLWDNDIGSLEAGKKADMVVVDPF 408 (420)
Q Consensus 378 T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~ 408 (420)
|.|||+++|++ ++|+|++|++|||+|||.+
T Consensus 334 T~npA~~Lgl~-~~G~I~~G~~ADlvild~~ 363 (389)
T TIGR01975 334 TSNVAGVLNLT-GKGEISPGNDADLVVLDPD 363 (389)
T ss_pred HHHHHHHhCCC-CCCeECCCCcCCEEEEcCC
Confidence 99999999997 5799999999999999987
No 47
>TIGR01792 urease_alph urease, alpha subunit. This model describes the urease alpha subunit UreC (designated beta or B chain, UreB in Helicobacter species). Accessory proteins for incorporation of the nickel cofactor are usually found in addition to the urease alpha, beta, and gamma subunits. The trusted cutoff is set above the scores of many reported fragments and of a putative second urease alpha chain in Streptomyces coelicolor.
Probab=99.98 E-value=2e-30 Score=243.45 Aligned_cols=329 Identities=17% Similarity=0.169 Sum_probs=191.2
Q ss_pred CCceEEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhh--hhh---ccCCCcEEeCCCcEEeecccccccccch
Q 014702 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADIL--QQF---SQMADQIIDLQSQILLPGFVNTHVHTSQ 91 (420)
Q Consensus 17 ~~~~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~--~~~---~~~~~~~iD~~g~~v~PGfID~H~H~~~ 91 (420)
+.+|++|+|++|++ ..+ +..++|.|+||+|++|++..+.. ..+ .+.++++||++|++|+|||||+|+|+..
T Consensus 64 ~~MDlVIkNg~VID--~~g--i~kaDI~IkDGrIaaIG~~~~p~~~~~v~~~~~~~tEVIDa~GkIV~PGlIDtHvH~~~ 139 (567)
T TIGR01792 64 GVLDLVITNALILD--WTG--IYKADIGIKNGRIVGIGKAGNPDTMDGVDMIVGASTEAISGEGKIVTAGGIDTHVHYIS 139 (567)
T ss_pred ccCcEEEECeEEEC--CCC--eEEEEEEEECCEEEEEcCCCcccccccccccCCCCCeEEECCCCEEEECeEEeecCCCC
Confidence 45789999999995 322 46789999999999999753211 000 0135789999999999999999999821
Q ss_pred hhhcccCCCCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCcc---------------CHHHHHHH
Q 014702 92 QLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ---------------HVSEMAKA 156 (420)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~---------------~~~~~~~~ 156 (420)
+ . ..+.++..|+|+++..|.. ....+.+.
T Consensus 140 ------------------------P---~---------~~~aAl~gGVTTmI~~Gtgp~~~t~pTt~t~~~~~~~~~l~a 183 (567)
T TIGR01792 140 ------------------------P---Q---------QVQAALDNGITTLIGGGTGPADGTNATTCTPGPWYLHRMLQA 183 (567)
T ss_pred ------------------------c---c---------HHHHHHhCceEEEecCCCccccCCCCcccccchhhHHHHHHH
Confidence 1 0 1256789999999985431 01122344
Q ss_pred HHHhCCeeEeeehhccCCCCCCcccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHcC
Q 014702 157 VELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFK 236 (420)
Q Consensus 157 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~ 236 (420)
....+++..+. +.+.. . ......+.+ .. +.+ .+.++..+..+++.+.++++.|++++
T Consensus 184 a~~~~in~g~~------g~g~~------~---~~~~L~e~i----~a--Ga~--gfK~h~~y~~s~e~L~~al~~A~e~g 240 (567)
T TIGR01792 184 ADGLPINFGFT------GKGSG------S---GPAALIEQI----EA--GAC--GLKVHEDWGATPAAIDNALSVADEYD 240 (567)
T ss_pred hccCCccEEEE------eCCcc------c---hHHHHHHHH----Hc--CCc--EEEeCCCCCCCHHHHHHHHHHHHHcC
Confidence 44445442111 00110 0 112222222 22 222 25566777899999999999999999
Q ss_pred CccceeccCCcch---hHHHHhhcCCCCChHHHHHHhccCCC-----------ccceeeccCCC-hhhHHHHHhcCCeEE
Q 014702 237 TGIHMHVAEIPYE---NQVVMDTRKVDHGTVTFLDKIEFLQN-----------NLLSAHTVWVN-HTEIGLLSRAGVKVS 301 (420)
Q Consensus 237 ~~v~~h~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~-----------~~~~~h~~~~~-~~~~~~~~~~~~~~~ 301 (420)
+++++|+ ++..+ .+...+.. +.+++.+++..+.-.. ..++.-....+ |-.++-+.++--.++
T Consensus 241 v~V~iH~-ET~~E~g~ve~t~~a~--g~rpIh~~H~~G~g~ghapdi~~~~~~~~~~~~st~pt~p~~~~~~~e~~~m~~ 317 (567)
T TIGR01792 241 VQVAVHT-DTLNESGFVEDTIAAF--KGRTIHTYHTEGAGGGHAPDIIVVVGYNNILPSSTNPTLPYTVNTIDEHLDMLM 317 (567)
T ss_pred CEEEEeC-CCcccchHHHHHHHHH--CCCcchhHhhcCCCCCcHHHHHHHcCCCCcccCCCCCCCCCccCchhhhcCeEE
Confidence 9999999 66655 43333322 2234443333332111 11111111100 111111112212233
Q ss_pred ECccch-------------hhccCcccHHHHHHcCCcEEEccCCCCCCCCCCHH-HHHHHHHHHhcccccccCC--CCCC
Q 014702 302 HCPASA-------------MRMLGFAPIKEMLHADICVSLGTDGAPSNNRMSIV-DEMYLASLINKGREVFANG--TTDP 365 (420)
Q Consensus 302 ~~p~~~-------------~~~~~~~~~~~~~~~gv~~~lgsD~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~ 365 (420)
+|...+ .|...+..-..|.+.|+..+++||..+.+.-.... +.++.+......+..+... +...
T Consensus 318 ~~h~l~~~~~~d~~~a~~r~r~~t~~ae~~l~d~G~~~~~~sDs~~mgr~~~~~~r~~q~a~k~~~~~g~~~~~~~~~~~ 397 (567)
T TIGR01792 318 VCHHLNPKIPEDVAFAESRIRKETIAAEDVLQDMGAISMISSDSQAMGRIGEVVTRCWQTADKMKKQRGPLPGDSPGNDN 397 (567)
T ss_pred EeccCCCCCcccchhhhhhccceeccccchhhhCCcEEEecCCchhhCcccceeechHHHHHHHHHhcCCCcccccCChh
Confidence 332211 12223334456788999999999997543211211 2233333333322222111 1122
Q ss_pred CCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEcCCCCCCC
Q 014702 366 AALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMV 413 (420)
Q Consensus 366 ~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~ 413 (420)
+.++.+ |++.|.|||+++|+++++|+|++||.|||||||+++|...
T Consensus 398 ~rl~r~--L~~yT~n~A~a~g~~~~~GsLe~Gk~ADlVv~~~d~f~~~ 443 (567)
T TIGR01792 398 NRVKRY--VAKYTINPAITHGISDYIGSIEVGKLADLVLWEPAFFGVK 443 (567)
T ss_pred hhHHHH--HHHHhHHHHHHcCcccCceeeCCCCccCEEEEcCcccCCC
Confidence 445454 9999999999999999999999999999999999998854
No 48
>PRK09357 pyrC dihydroorotase; Validated
Probab=99.98 E-value=1.1e-30 Score=247.41 Aligned_cols=328 Identities=20% Similarity=0.214 Sum_probs=196.6
Q ss_pred eEEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhcccCC
Q 014702 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (420)
Q Consensus 20 ~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~~~ 99 (420)
+++|+|++|++ ++ ..+.+++|.|+||+|++|++... ....++||++|++|+|||||+|+|+...
T Consensus 2 ~~~i~~~~v~~--~~-~~~~~~~I~I~dg~I~~i~~~~~------~~~~~~iD~~g~~v~PG~ID~H~H~~~~------- 65 (423)
T PRK09357 2 MILIKNGRVID--PK-GLDEVADVLIDDGKIAAIGENIE------AEGAEVIDATGLVVAPGLVDLHVHLREP------- 65 (423)
T ss_pred cEEEEeEEEEC--CC-CCcceeeEEEECCEEEEeeCCCC------CCCCeEEECCCCEEeCCEEecccccCCC-------
Confidence 58999999995 32 35677899999999999986421 1356899999999999999999998320
Q ss_pred CCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCcc--------CHHHHHHHHHHhCCeeEeeehhc
Q 014702 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--------HVSEMAKAVELLGLRACLVQSTM 171 (420)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~--------~~~~~~~~~~~~g~~~~~~~~~~ 171 (420)
.....++. ....+.++++|||++.+++.. ......+.+...+.+.+.....+
T Consensus 66 ----------------~~~~~e~~----~~~~~~a~~~GvTt~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (423)
T PRK09357 66 ----------------GQEDKETI----ETGSRAAAAGGFTTVVAMPNTKPVIDTPEVVEYVLDRAKEAGLVDVLPVGAI 125 (423)
T ss_pred ----------------CccccccH----HHHHHHHHhCCCeEEEecCCCCCCCCcHHHHHHHHHHhccCCcccEEEEEEE
Confidence 00111111 112345679999999998732 12334455555565544443333
Q ss_pred cCCCCCCcccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHcCCccceeccCCcchhH
Q 014702 172 DCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQ 251 (420)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~ 251 (420)
..+ ... ....+...+.+ . + +.. +..+..+..+++.+.++++.++++++++++|+.+......
T Consensus 126 ~~~--~~~--------~~~~~~~~l~~----~--g-v~~-~~~~~~~~~~~~~l~~~~~~a~~~g~~v~iH~ee~~~~~~ 187 (423)
T PRK09357 126 TKG--LAG--------EELTEFGALKE----A--G-VVA-FSDDGIPVQDARLMRRALEYAKALDLLIAQHCEDPSLTEG 187 (423)
T ss_pred EeC--CCC--------ccHHHHHHHHh----C--C-cEE-EECCCcccCCHHHHHHHHHHHHhcCCEEEEeCCCHHHhhc
Confidence 221 110 01122222221 1 2 222 3445556668889999999999999999999988654322
Q ss_pred HHH------hhcCCCCC-hH-------HHHHHhccCCCccceeeccCCChhh-HHHHHhcC--CeEEECccchhh-----
Q 014702 252 VVM------DTRKVDHG-TV-------TFLDKIEFLQNNLLSAHTVWVNHTE-IGLLSRAG--VKVSHCPASAMR----- 309 (420)
Q Consensus 252 ~~~------~~~~~~~~-~~-------~~l~~~~~~~~~~~~~h~~~~~~~~-~~~~~~~~--~~~~~~p~~~~~----- 309 (420)
... ...+.... .. ..+......+.+..+.|......-+ ++..++.| +.+.+||.+...
T Consensus 188 ~~~~~g~~~~~~~~~~~p~~~E~~~i~~~~~la~~~g~~~hi~H~s~~~~~~~i~~a~~~g~~v~~e~~ph~L~~~~~~~ 267 (423)
T PRK09357 188 GVMNEGEVSARLGLPGIPAVAEEVMIARDVLLAEATGARVHICHVSTAGSVELIRWAKALGIKVTAEVTPHHLLLTDEDL 267 (423)
T ss_pred ccccCChhhHHhCCCCCCHHHHHHHHHHHHHHHHHHCCcEEEEeCCCHHHHHHHHHHHHcCCCEEEEechHHheEcHHHH
Confidence 110 00111110 00 1122222334444455554432222 44455555 455588854210
Q ss_pred ------c---------cCcccHHHHHHcCCcEEEccCCCCCCCCCC---HH--------HHHHHHHHHhcccccccCCCC
Q 014702 310 ------M---------LGFAPIKEMLHADICVSLGTDGAPSNNRMS---IV--------DEMYLASLINKGREVFANGTT 363 (420)
Q Consensus 310 ------~---------~~~~~~~~~~~~gv~~~lgsD~~~~~~~~~---~~--------~~~~~~~~~~~~~~~~~~~~~ 363 (420)
. ....++++++++|+.+++||||+|++.... ++ -+.....++....
T Consensus 268 ~~~~~~~k~~Pplr~~~~~~~l~~~l~~G~~~~i~sDh~p~~~~~k~~~~~~~~~G~~g~e~~~~~~~~~~~-------- 339 (423)
T PRK09357 268 LTYDPNYKVNPPLRTEEDREALIEGLKDGTIDAIATDHAPHAREEKECEFEAAPFGITGLETALSLLYTTLV-------- 339 (423)
T ss_pred hCcCCceEECCCCCCHHHHHHHHHHHHcCCCeEEecCCCCCChHHccCCHhhCCCCceEHHHHHHHHHHHHH--------
Confidence 0 123466778899999999999998642211 11 1111222222111
Q ss_pred CCCCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEcCCCCC
Q 014702 364 DPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWP 411 (420)
Q Consensus 364 ~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~ 411 (420)
...+++++++++++|.|||+++|+.+ |+|++|++|||+|+|.+..+
T Consensus 340 ~~~~~~~~~~~~~~t~~~A~~~g~~~--G~i~~G~~AD~~i~d~~~~~ 385 (423)
T PRK09357 340 KTGLLDLEQLLEKMTINPARILGLPA--GPLAEGEPADLVIFDPEAEW 385 (423)
T ss_pred HcCCCCHHHHHHHHhHHHHHHhCCCC--CccCCCCcCCEEEEcCCCCE
Confidence 12359999999999999999999964 99999999999999988653
No 49
>PRK06846 putative deaminase; Validated
Probab=99.98 E-value=4.9e-30 Score=241.30 Aligned_cols=331 Identities=15% Similarity=0.109 Sum_probs=209.3
Q ss_pred eceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhcccC-CC---CChHHHhhhccccc
Q 014702 39 RNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA-DD---VDLMTWLHDRIWPY 114 (420)
Q Consensus 39 ~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~~-~~---~~~~~~~~~~~~~~ 114 (420)
...+|.|++|+|++|++....+ ..+.++||++|++|+|||||+|+|+.+...++.. .. ....+|+....+..
T Consensus 30 ~~~~i~i~~g~I~~i~~~~~~~----~~~~~~id~~g~~v~Pg~iD~H~H~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~ 105 (410)
T PRK06846 30 ALCTLEIQDGKIVAIRPNKQVP----DATLPTYDANGLLMLPAFREMHIHLDKTYYGGPWKACRPAKTIQDRIELEQKEL 105 (410)
T ss_pred eeEEEEEECCEEEEeecCCCCC----CCCCceEeCCCCEEecCEEeeeecccchhhccchhhcCCcccHHHHHhhhhhhH
Confidence 4579999999999999853211 1246899999999999999999999876544321 11 22345553222211
Q ss_pred cCCCChHHHHHHHHHHHHHHHhCCcceeeeCCccCH-------HHHHHHHHHhCCeeEeeehhccCCCCCCcccccCChh
Q 014702 115 ESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHV-------SEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTD 187 (420)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~~~-------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (420)
.... +.....+......++..|+|+++++..... ....+...+............ ...+.. .
T Consensus 106 ~~~~--~~~~~~a~~~l~~~~~~Gtt~~r~~v~~~~~~~~~~~~a~~e~l~e~~~~v~~~~~a~-~~~g~~----~---- 174 (410)
T PRK06846 106 PELL--PTTQERAEKLIELLQSKGATHIRSHCNIDPVIGLKNLENLQAALERYKDGFTYEIVAF-PQHGLL----R---- 174 (410)
T ss_pred HHhH--HHHHHHHHHHHHHHHhCCccEEEEEEeeCcccccchHHHHHHHHHHhhCcceEEEEec-cCcccC----C----
Confidence 1100 111122224566777889999766542111 122233333222211111111 111110 0
Q ss_pred HHHHHHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCChHHHH
Q 014702 188 DCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFL 267 (420)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l 267 (420)
.....++++....+...++. +.+......+++.+++++++|+++|+++++|+.+.........+ ...+.+
T Consensus 175 ---~~~~~lL~~al~~Ga~~i~g-l~p~~~~~~~~~~l~~~~~lA~~~g~~v~~Hv~e~~~~~~~~~~------~~~~~~ 244 (410)
T PRK06846 175 ---SNSEPLMREAMKMGAHLVGG-VDPASVDGAIEKSLDTMFQIAVDFNKGVDIHLHDTGPLGVATIK------YLVETT 244 (410)
T ss_pred ---ccHHHHHHHHHHcCCCEEeC-CCCccCCcCHHHHHHHHHHHHHHhCCCcEEEECCCCChhHHHHH------HHHHHH
Confidence 01123444444444443332 34444456778899999999999999999999976643322221 245666
Q ss_pred HHhccCCCccceeeccCC---ChhhH----HHHHhcCCeEEECccchhhccCcccHHHHHHcCCcEEEccCCCC----CC
Q 014702 268 DKIEFLQNNLLSAHTVWV---NHTEI----GLLSRAGVKVSHCPASAMRMLGFAPIKEMLHADICVSLGTDGAP----SN 336 (420)
Q Consensus 268 ~~~~~~~~~~~~~h~~~~---~~~~~----~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~gv~~~lgsD~~~----~~ 336 (420)
...++.+ +..+.|+.++ +++++ +++++.|+.+++++. ...+.+|++++.+.|+++++|||++. ..
T Consensus 245 ~~~gl~~-~v~~~H~~~l~~~~~~e~~~li~~la~~g~~v~~~~~---~~~g~~p~~~l~~~Gv~v~lGtD~~~~~~~p~ 320 (410)
T PRK06846 245 EEAQWKG-KVTISHAFALGDLNEEEVEELAERLAAQGISITSTVP---IGRLHMPIPLLHDKGVKVSLGTDSVIDHWSPF 320 (410)
T ss_pred HHhCCCC-CEEEEecchhhcCCHHHHHHHHHHHHHcCCeEEEeCC---CCCCCCCHHHHHhCCCeEEEecCCCCCCCcCC
Confidence 6777655 7889999875 66664 478999998887543 22567999999999999999999762 22
Q ss_pred CCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEcCCC
Q 014702 337 NRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFS 409 (420)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~ 409 (420)
...+++++++.+....+.. . .-++.++++++|.++ +.+++++.+|+|++||.|||||+|.++
T Consensus 321 ~~~d~~~~~~~~~~~~~~~--------~--~~~~~~~l~~~T~~a-~~l~~~~~~G~l~~G~~ADlvlld~~~ 382 (410)
T PRK06846 321 GTGDMLEKANLLAELYRWS--------D--ERSLSRSLALATGGV-LPLNDEGERVWPKVGDEASFVLVDASC 382 (410)
T ss_pred CCCCHHHHHHHHHHHhcCC--------C--HHHHHHHHHHHcCCc-cccccCCCccCCCCCCcccEEEEeCCC
Confidence 4567999888776544311 1 134568999999884 668887778999999999999999865
No 50
>PRK15446 phosphonate metabolism protein PhnM; Provisional
Probab=99.98 E-value=1e-30 Score=242.00 Aligned_cols=310 Identities=19% Similarity=0.196 Sum_probs=183.2
Q ss_pred CceEEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhccc
Q 014702 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (420)
Q Consensus 18 ~~~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~ 97 (420)
+++++|+|++|++.++ . ..++|+|+||||++|++... ...++||++|++|+|||||+|+|....
T Consensus 1 ~~~~~i~~~~v~~~~~---~-~~~~i~i~~g~I~~i~~~~~-------~~~~~iDa~g~~v~PG~ID~H~h~~~~----- 64 (383)
T PRK15446 1 MMEMILSNARLVLPDE---V-VDGSLLIEDGRIAAIDPGAS-------ALPGAIDAEGDYLLPGLVDLHTDNLEK----- 64 (383)
T ss_pred CccEEEECcEEEcCCC---c-eeeeEEEECCEEEEecCCCC-------CCCceEeCCCCEEEeCeEEcccCCccc-----
Confidence 3679999999997442 2 27899999999999998432 245789999999999999999965310
Q ss_pred CCCCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCc-c--C-----HHH----HHHHHH--HhCCe
Q 014702 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-Q--H-----VSE----MAKAVE--LLGLR 163 (420)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~-~--~-----~~~----~~~~~~--~~g~~ 163 (420)
....|. ...++..+.+ ....++++.+||||++++.. . . ... ...... ...-+
T Consensus 65 ----~~~p~~-------~~~~~~~~~~---~~~~~~a~~gG~Tt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (383)
T PRK15446 65 ----HLAPRP-------GVDWPADAAL---AAHDAQLAAAGITTVFDALSVGDEEDGGLRSRDLARKLIDAIEEARARGL 130 (383)
T ss_pred ----ccCCCC-------CCccchHHHH---HHHHHHHHhCCccEeeeeeEeccCCCCCcccHHHHHHHHHHHHHhhhcCc
Confidence 000010 0011211222 22447899999999999631 1 1 121 112222 11111
Q ss_pred eEeeehhccCCCCCCcccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeec----------------------------
Q 014702 164 ACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIR---------------------------- 215 (420)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---------------------------- 215 (420)
. ..+.+....... .......+.. .+...+...++.+....
T Consensus 131 ~-----~vD~~~h~~~~~---~~~~~~~~l~----~~~~~g~~~~k~fm~~~p~~~~~~~~~~~~~~~~~~~g~~~~e~~ 198 (383)
T PRK15446 131 L-----RADHRLHLRCEL---TNPDALELFE----ALLAHPRVDLVSLMDHTPGQRQFRDLEKYREYYAGKYGLSDEEFD 198 (383)
T ss_pred h-----hccceeEEEEEe---cCcchHHHHH----HHhcCCCcCEEEEeCCCCccccccCHHHHHHHHHhhcCCCHHHHH
Confidence 1 111111000000 0001111111 11111222222222111
Q ss_pred --------cccccCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCCCh
Q 014702 216 --------QIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH 287 (420)
Q Consensus 216 --------~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~ 287 (420)
.....+.+.++.+++.|+++|+++..|+.+......... ..+. .+..| ..+.
T Consensus 199 ~~~~~~~~~~~~~~~e~i~~~v~~A~~~g~~v~sH~~~~~~~i~~a~--------------~~Gv----~~~e~--~~~~ 258 (383)
T PRK15446 199 AFVEERIALSARYAPPNRRAIAALARARGIPLASHDDDTPEHVAEAH--------------ALGV----AIAEF--PTTL 258 (383)
T ss_pred HHHHHHHHhHhhcCHHHHHHHHHHHHHCCCceeecCCCCHHHHHHHH--------------HcCC----ceeeC--CCcH
Confidence 011235677888999999999999999865433221111 1111 11223 3356
Q ss_pred hhHHHHHhcCCeEEECccchhhc---cCcccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCC
Q 014702 288 TEIGLLSRAGVKVSHCPASAMRM---LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTD 364 (420)
Q Consensus 288 ~~~~~~~~~~~~~~~~p~~~~~~---~~~~~~~~~~~~gv~~~lgsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (420)
+.++.+++.|+.+..++....+. .+..+++++++.|+.++++||+.+. +++..+.....
T Consensus 259 e~~~~~~~~g~~v~~~~p~~~r~~~~~~~~~~~~~~~~Gv~~~lgSD~~p~----~~~~~~~~~~~-------------- 320 (383)
T PRK15446 259 EAARAARALGMSVLMGAPNVVRGGSHSGNVSALDLAAAGLLDILSSDYYPA----SLLDAAFRLAD-------------- 320 (383)
T ss_pred HHHHHHHHCCCEEEeCCcccccCCcccchHhHHHHHHCCCcEEEEcCCChh----hHHHHHHHHHH--------------
Confidence 77788888898877665433332 3456788899999999999999653 23332222111
Q ss_pred CCCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEcCC
Q 014702 365 PAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPF 408 (420)
Q Consensus 365 ~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~ 408 (420)
..++|++++++++|.|||+++|++++ |+|++|+.|||+|+|.+
T Consensus 321 ~~gls~~~al~~~T~npA~~lgl~~~-G~I~~G~~ADlvv~d~~ 363 (383)
T PRK15446 321 DGGLDLPQAVALVTANPARAAGLDDR-GEIAPGKRADLVRVRRA 363 (383)
T ss_pred hcCCCHHHHHHHHhHHHHHHcCCCCC-cCcCCCCcCCEEEEcCC
Confidence 13599999999999999999999765 99999999999999998
No 51
>PRK13207 ureC urease subunit alpha; Reviewed
Probab=99.97 E-value=1.7e-29 Score=236.86 Aligned_cols=316 Identities=18% Similarity=0.204 Sum_probs=188.3
Q ss_pred CCceEEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhh-----hhccCCCcEEeCCCcEEeecccccccccch
Q 014702 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQ-----QFSQMADQIIDLQSQILLPGFVNTHVHTSQ 91 (420)
Q Consensus 17 ~~~~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~-----~~~~~~~~~iD~~g~~v~PGfID~H~H~~~ 91 (420)
+.+|++|+|++|++ +. . +..++|.|+||+|++|++...... ...+.++++||++|++|+|||||+|+|+..
T Consensus 65 ~~mDlVI~Na~Vvd--~~-g-i~~adI~I~dGrI~~IG~~~~p~~~~~v~~~~~~~~eVIDa~G~iV~PG~ID~HvH~~~ 140 (568)
T PRK13207 65 GAVDTVITNALILD--HW-G-IVKADIGIKDGRIVAIGKAGNPDIQDGVDIIIGPGTEVIAGEGLIVTAGGIDTHIHFIC 140 (568)
T ss_pred ccCCEEEECeEEEC--CC-C-eEEEEEEEECCEEEEEeCCCCccccccccccCCCCCeEEECCCCEEEeCeEECccCCcc
Confidence 45799999999994 32 2 357899999999999997532100 001136789999999999999999999821
Q ss_pred hhhcccCCCCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCccC---------------HHHHHHH
Q 014702 92 QLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH---------------VSEMAKA 156 (420)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~~---------------~~~~~~~ 156 (420)
+ . ..+.++.+||||+++++... ...+.+.
T Consensus 141 ------------------------P---~---------~~~aALagGVTTVi~mg~gP~~gt~~~t~tpG~~~l~~~l~~ 184 (568)
T PRK13207 141 ------------------------P---Q---------QIEEALASGVTTMIGGGTGPATGTNATTCTPGPWHIHRMLQA 184 (568)
T ss_pred ------------------------c---c---------HHHHHHcCCCCEEEcCCcCCccCCcccccccchHHHHHHHHH
Confidence 1 0 02567899999999974211 0111111
Q ss_pred HHHhCCeeEeeehhccCCCCCCcccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHcC
Q 014702 157 VELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFK 236 (420)
Q Consensus 157 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~ 236 (420)
.....+... +... + ......+.. ++...+...++++ ..+..+++.+.++++.+++++
T Consensus 185 a~~~pin~g----~~g~--g---------~~~~~~~L~----e~i~aGA~gfKi~----~d~g~t~~~l~~aL~~A~~~g 241 (568)
T PRK13207 185 ADAFPMNIG----FLGK--G---------NASLPEALE----EQIEAGAIGLKLH----EDWGATPAAIDNCLSVADEYD 241 (568)
T ss_pred hhcCCceEE----EEcC--C---------CcccHHHHH----HHHHcCCCEEeec----CCCCCCHHHHHHHHHHHHHhC
Confidence 111111110 0000 0 011122222 2223333344432 223468889999999999999
Q ss_pred CccceeccCCcchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCC-------ChhhHHHHHhcCCe-EEECcc---
Q 014702 237 TGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV-------NHTEIGLLSRAGVK-VSHCPA--- 305 (420)
Q Consensus 237 ~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~-------~~~~~~~~~~~~~~-~~~~p~--- 305 (420)
+++.+|+....... ..+. .+..... ...|..|. .++-++.+...++- .++.|.
T Consensus 242 v~V~iHa~tlne~G------------~~e~--t~~a~~g--~~iH~~H~egaggghapdii~~~~~~~v~p~st~pt~p~ 305 (568)
T PRK13207 242 VQVAIHTDTLNESG------------FVED--TIAAFKG--RTIHTFHTEGAGGGHAPDIIKVAGEPNVLPSSTNPTRPY 305 (568)
T ss_pred CEEEEeCCCcccch------------HHHH--HHHhcCC--CEEEEEeecCCCcCCchHHHHHhhcCCCccCCCCCCCCC
Confidence 99999996543221 1110 0011111 12233332 23445555554433 112221
Q ss_pred c-----------------h-------------hhccCcccHHHHHHcCCcEEEccCCCCCCC-CCCHHHHHHHHHHHhcc
Q 014702 306 S-----------------A-------------MRMLGFAPIKEMLHADICVSLGTDGAPSNN-RMSIVDEMYLASLINKG 354 (420)
Q Consensus 306 ~-----------------~-------------~~~~~~~~~~~~~~~gv~~~lgsD~~~~~~-~~~~~~~~~~~~~~~~~ 354 (420)
+ + .|...+..-.-+.+.|+..+++||++..+. +.+++..++.+..++..
T Consensus 306 ~~~~~~e~~~m~m~~h~l~~~~~~d~~~a~srir~~t~~ae~~l~d~Ga~~~~~SD~p~~~~~~~~~~r~~q~A~~r~~~ 385 (568)
T PRK13207 306 TVNTIDEHLDMLMVCHHLDPSIPEDVAFAESRIRRETIAAEDILHDLGAISMISSDSQAMGRVGEVIIRTWQTAHKMKVQ 385 (568)
T ss_pred ccCchhhhcCeEEeecCCCCCCcchhhhhhhhccceeecccchhhhCCCEEEecCCcccccccccchhHHHHHHHHHHHc
Confidence 1 0 011222233457899999999999986531 35678888888776543
Q ss_pred ccccc--CCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEcCCCCCCC
Q 014702 355 REVFA--NGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMV 413 (420)
Q Consensus 355 ~~~~~--~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~ 413 (420)
..... .++..++.++.+ |+++|.|||+++|+++.+|+|++||.||||||+++.|...
T Consensus 386 ~G~~~~d~~~~~n~ri~~~--l~~~T~npA~alG~~~~vGsIe~Gk~ADlVvld~d~f~~~ 444 (568)
T PRK13207 386 RGPLPGDSGRNDNFRVKRY--IAKYTINPAIAHGISHEVGSVEVGKLADLVLWKPAFFGVK 444 (568)
T ss_pred cCCCCcccccCccchHHHH--HHHHhHHHHHHcCCCcCccccCCCCcCCEEEECchhcCCC
Confidence 22221 112233445554 9999999999999999899999999999999999987643
No 52
>PRK13206 ureC urease subunit alpha; Reviewed
Probab=99.97 E-value=2.3e-29 Score=235.17 Aligned_cols=315 Identities=18% Similarity=0.204 Sum_probs=182.6
Q ss_pred CCceEEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhh--h-----hhhccCCCcEEeCCCcEEeeccccccccc
Q 014702 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADI--L-----QQFSQMADQIIDLQSQILLPGFVNTHVHT 89 (420)
Q Consensus 17 ~~~~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~--~-----~~~~~~~~~~iD~~g~~v~PGfID~H~H~ 89 (420)
+..|++|+|++|++ ..+ ...++|.|+||+|++|++.... . ..+.+..+++||++|++|+|||||+|+|+
T Consensus 69 ~~~DlVI~Na~IiD--~~g--i~~adI~IkDGrIvaIG~~~~p~~~~gv~~~~~ig~~tevIDaeG~iV~PG~ID~HVH~ 144 (573)
T PRK13206 69 GAPDTVITGAVILD--HWG--IVKADVGIRDGRIVAIGKAGNPDIMDGVHPDLVIGPSTEIIAGNGRILTAGAIDCHVHF 144 (573)
T ss_pred CCCCEEEECeEEEC--CCC--eEEEEEEEECCEEEEEeCCCCccccccccccccCCCCCEEEECCCCEEEeCEEeeeecc
Confidence 46799999999994 433 2457999999999999985321 0 00112357899999999999999999998
Q ss_pred chhhhcccCCCCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCccC---------------HHHHH
Q 014702 90 SQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH---------------VSEMA 154 (420)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~~---------------~~~~~ 154 (420)
.. + . ..+.++.+||||+++++... ...+.
T Consensus 145 ~~------------------------P---g---------~~~aALagGVTTvi~~G~gP~~~t~~~t~t~g~~~l~~~~ 188 (573)
T PRK13206 145 IC------------------------P---Q---------IVDEALAAGITTLIGGGTGPAEGSKATTVTPGAWHLARML 188 (573)
T ss_pred CC------------------------c---h---------HHHHHHcCCeEEEEcCCCCccccCcccccccchhHHHHHH
Confidence 21 1 1 11567899999999864221 00111
Q ss_pred HHHHHhCCeeEeeehhccCCCCCCcccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHH
Q 014702 155 KAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMARE 234 (420)
Q Consensus 155 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~ 234 (420)
+......++.. +. +.+.. .. .. .+.++...+...++. +..+..+++.+.++++.+++
T Consensus 189 ~aa~~~pvn~g----~~--g~g~~------~~---~~----~L~el~~aGA~GfKi----~~d~g~t~~~i~~aL~~A~~ 245 (573)
T PRK13206 189 EALDGWPVNVA----LL--GKGNT------VS---AE----ALWEQLRGGAGGFKL----HEDWGSTPAAIDACLRVADA 245 (573)
T ss_pred HHhhcCceeEE----Ee--cCcCc------CC---HH----HHHHHHHCCCcEEee----cCccCCCHHHHHHHHHHHHH
Confidence 21111111111 00 00100 00 11 233333333333443 23345789999999999999
Q ss_pred cCCccceeccCCcchhHHHHhhcCCCCChHHHHHHhccCCCccc-eeeccCCCh---hhHHH------------------
Q 014702 235 FKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLL-SAHTVWVNH---TEIGL------------------ 292 (420)
Q Consensus 235 ~~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~h~~~~~~---~~~~~------------------ 292 (420)
+++++.+|+...... +..+. .+.....+.+ ..|.....- .++-+
T Consensus 246 ~gv~V~iHadtlne~------------g~~E~--t~aa~~gr~iH~~H~egaggghapd~~~~~~~~n~lp~stnpt~p~ 311 (573)
T PRK13206 246 AGVQVALHSDTLNEA------------GFVED--TLAAIAGRSIHAYHTEGAGGGHAPDIITVASHPNVLPSSTNPTRPH 311 (573)
T ss_pred hCCEEEEECCCcccc------------chhhH--HHHHhcCCeEEEEeccCCCcCcccHHHHhcCCCCCcCCCCCCCCCC
Confidence 999999999764421 11111 0001111111 112111110 11111
Q ss_pred ----HHhcCCeEEECccch-------------hhccCcccHHHHHHcCCcEEEccCCCCCCCC----CCHHHHHHHHHHH
Q 014702 293 ----LSRAGVKVSHCPASA-------------MRMLGFAPIKEMLHADICVSLGTDGAPSNNR----MSIVDEMYLASLI 351 (420)
Q Consensus 293 ----~~~~~~~~~~~p~~~-------------~~~~~~~~~~~~~~~gv~~~lgsD~~~~~~~----~~~~~~~~~~~~~ 351 (420)
+.++--.+++|...+ .|...+..-..+.+.|+..+++||.+..+.- ..+|..+..+..
T Consensus 312 ~~nt~~e~~~m~m~~h~l~~~~~~d~~fa~srir~~ti~ae~~l~d~G~~~~~~SDs~~~~~~~e~~~~~~q~a~~~~~- 390 (573)
T PRK13206 312 TVNTLDEHLDMLMVCHHLNPAVPEDLAFAESRIRPSTIAAEDVLHDMGAISMIGSDSQAMGRIGEVVLRTWQTAHVMKR- 390 (573)
T ss_pred cccchhhhhCeEEeeccCCCCCcchhhhhhhhccceeeccCchHhhCCcEEeccCCccccccccchhhhHHHHHHHHHh-
Confidence 111111122221111 1112233445688999999999999874322 234444433322
Q ss_pred hcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEcCCCCCC
Q 014702 352 NKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPM 412 (420)
Q Consensus 352 ~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~ 412 (420)
+.....++...+.++.+++|++.|.|||+++|+++.+|+|++||.|||||||++.|..
T Consensus 391 ---rr~~l~g~~~~~~~~v~~al~~yT~nPA~alG~~~~~GsLe~Gk~ADlVvld~d~f~~ 448 (573)
T PRK13206 391 ---RRGALPGDGRADNNRARRYVAKYTICPAVAHGIDHEIGSVEVGKLADLVLWEPAFFGV 448 (573)
T ss_pred ---ccCCCCCCCcccchhHHHHHHHHHHHHHHHhCCCcCCcccCCCCcCCEEEECccccCC
Confidence 2211223334678999999999999999999998889999999999999999998764
No 53
>KOG2584 consensus Dihydroorotase and related enzymes [Nucleotide transport and metabolism]
Probab=99.97 E-value=4.1e-31 Score=230.44 Aligned_cols=350 Identities=15% Similarity=0.187 Sum_probs=222.5
Q ss_pred CCCCCceEEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhh
Q 014702 14 SLGSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQL 93 (420)
Q Consensus 14 ~~~~~~~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~ 93 (420)
+..++..++|+||+|++-|. . ...||+++||.|.+|+++..++ .+.++||++|++|+||.||.|+|+-+..
T Consensus 9 ~~v~s~rllikgg~vvN~d~--~--~~aDV~vedGiI~~vg~~l~ip-----gg~~~ida~g~~ViPGgID~Hthlq~p~ 79 (522)
T KOG2584|consen 9 PHVASNRLLIKGGRVVNDDQ--S--FKADVYVEDGIIKEVGENLIIP-----GGVKVIDATGKMVIPGGIDPHTHLQMPF 79 (522)
T ss_pred ccccccceeeeCCEEEccCC--c--eeeeEEeccCEEEEecccEEcC-----CCceEEecCCcEEecCccCccceecccc
Confidence 33445689999999997553 3 4569999999999999987653 3889999999999999999999995432
Q ss_pred hcccCCCCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCccCH-HHHHHHHHHhCCeeEeeehhcc
Q 014702 94 AKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHV-SEMAKAVELLGLRACLVQSTMD 172 (420)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~ 172 (420)
+. . ...|.|. .+.++++.+|+|+++|+.-+.. ....++..+..- ..-..++.+
T Consensus 80 ~G---------------------~-ts~DdF~---~GTkAAlaGGtTmiID~vlp~~~~slv~afe~wr~-~Ad~k~cCD 133 (522)
T KOG2584|consen 80 MG---------------------M-TSVDDFF---QGTKAALAGGTTMIIDFVLPDKGTSLVEAFEKWRE-WADPKVCCD 133 (522)
T ss_pred CC---------------------c-cchhhhh---cccHHHhcCCceEEEEEecCCCCchHHHHHHHHHh-hcCCceeee
Confidence 22 1 1112222 2457889999999999753222 112222222111 111233444
Q ss_pred CCCCCCcccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHcCCccceeccCCcchhHH
Q 014702 173 CGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQV 252 (420)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~ 252 (420)
.+......+..... .+..+.+. +..+-..++.++++...+..+++++.+.++.+++.+...++|+.+.....+.
T Consensus 134 yglhv~It~W~~~v----~eem~~l~--~ekGvnsF~~fmayk~~~~v~d~~lye~l~~~~~lgala~vHAEngd~iae~ 207 (522)
T KOG2584|consen 134 YGLHVGITWWSPSV----KEEMEILV--KEKGVNSFKFFMAYKDLYMVRDSELYEALKVCAELGALAMVHAENGDAIAEG 207 (522)
T ss_pred eeeeEeeeecCcch----HHHHHHHh--hhcCcceEEeeeeeccccccCHHHHHHHHHHHhhcchhheehhhcchhhhhh
Confidence 44443333322222 22222222 3456677888899999999999999999999999999999999887655444
Q ss_pred HHhhcCCC---------CChHH--------HHHHhccCCCccceeeccCCChhh-HHHHHhcCCeEEECccchh------
Q 014702 253 VMDTRKVD---------HGTVT--------FLDKIEFLQNNLLSAHTVWVNHTE-IGLLSRAGVKVSHCPASAM------ 308 (420)
Q Consensus 253 ~~~~~~~~---------~~~~~--------~l~~~~~~~~~~~~~h~~~~~~~~-~~~~~~~~~~~~~~p~~~~------ 308 (420)
.......+ .++.+ ++......+...-+.|..+.+..+ +.+.++.|-.+.-.|....
T Consensus 208 q~~~l~~gitgPEgh~lSRPee~EaEA~~rai~ia~~~ncPlyvvhVmsksaa~~Ia~aRk~g~~v~gepita~l~~dg~ 287 (522)
T KOG2584|consen 208 QQRLLELGITGPEGHELSRPEELEAEATNRAITIARQANCPLYVVHVMSKSAADAIALARKKGRVVFGEPITASLGTDGS 287 (522)
T ss_pred hhHHHHcCCcCcccccccCchhhhHHHHHHHHHHHHhcCCCcceEEEeehhHHHHHHHHHhcCceeecccchhhhcccch
Confidence 33321110 11111 223333444455577888776554 6666666655544443320
Q ss_pred -----------hccCcc----------cHHHHHHcCCcEEEccCCCCCCC---------------CCCHHHHHHHHHHHh
Q 014702 309 -----------RMLGFA----------PIKEMLHADICVSLGTDGAPSNN---------------RMSIVDEMYLASLIN 352 (420)
Q Consensus 309 -----------~~~~~~----------~~~~~~~~gv~~~lgsD~~~~~~---------------~~~~~~~~~~~~~~~ 352 (420)
.....+ -+..++..|..-..+|||+++.. +.+-. +.++.+.+.
T Consensus 288 hy~~~~w~~Aa~~v~sPPlr~d~~t~~~L~~lLa~g~L~~tgSdhctf~~~qKalgKddFt~ip~GvnGv-edrMsviwe 366 (522)
T KOG2584|consen 288 HYWSKDWDHAAAFVTSPPLRPDPTTPDGLMDLLAEGDLQLTGSDHCTFTTEQKALGKDDFTKIPNGVNGV-EDRMSVIWE 366 (522)
T ss_pred hhccCChhhcceeeeCCCCCCCCCCHHHHHHHHhcCccceeecCCCCCCHHHHhhccCccccCCCccccc-cccceeeee
Confidence 001112 24467889999999999998631 11110 001111111
Q ss_pred cccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEcCCCCCCC
Q 014702 353 KGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMV 413 (420)
Q Consensus 353 ~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~ 413 (420)
+ ......++..+.++..++|+||++++..|+|+|++|.+|||||||++.....
T Consensus 367 k--------gv~~G~md~~~fVavtstnaAkifnlYprKGrIavGsDADiVIwdp~at~tI 419 (522)
T KOG2584|consen 367 K--------GVHSGKMDENRFVAVTSTNAAKIFNLYPRKGRIAVGSDADIVIWDPNATKTI 419 (522)
T ss_pred h--------hcccCccCcccEEEEecccchhheeccCcCceecccCCCcEEEECCCcceEe
Confidence 1 1234567889999999999999999999999999999999999999964433
No 54
>PRK13404 dihydropyrimidinase; Provisional
Probab=99.97 E-value=3.9e-30 Score=245.05 Aligned_cols=340 Identities=17% Similarity=0.175 Sum_probs=195.3
Q ss_pred CCceEEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhcc
Q 014702 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (420)
Q Consensus 17 ~~~~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~ 96 (420)
|++|++|+|++|++.+ + ...++|+|+||+|++|++.. + .+.++||++|++|+|||||+|+|+.+....+
T Consensus 2 ~~~d~~i~~~~v~~~~--~--~~~~~i~I~dg~I~~i~~~~--~-----~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~ 70 (477)
T PRK13404 2 MAFDLVIRGGTVVTAT--D--TFQADIGIRGGRIAALGEGL--G-----PGAREIDATGRLVLPGGVDSHCHIDQPSGDG 70 (477)
T ss_pred CCCcEEEECCEEEcCC--C--ceEEEEEEECCEEEEecCCC--C-----CCCeEEECCCCEEecCEEEeEEcCCccccCC
Confidence 4568999999999533 2 23589999999999998642 1 3568999999999999999999994311000
Q ss_pred cCCCCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCcc----CHHHHHHHHHHh-CCeeEeeehhc
Q 014702 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ----HVSEMAKAVELL-GLRACLVQSTM 171 (420)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~----~~~~~~~~~~~~-g~~~~~~~~~~ 171 (420)
....++ .....+.++.+|||++++++.. ...+..+..... .-.....+...
T Consensus 71 --------------------~~~~e~----~~~~s~aa~~gGvTtv~~~~~~~~~~~~~~~l~~~~~~~~~~~~vd~~~~ 126 (477)
T PRK13404 71 --------------------IMMADD----FYTGTVSAAFGGTTTVIPFAAQHRGQSLREAVEDYHRRAAGKAVIDYAFH 126 (477)
T ss_pred --------------------ccccch----HHHHHHHHHcCCccEEEEccCCCCCCCHHHHHHHHHHHhccCcEEEEEEE
Confidence 001111 1224456779999999997632 222222222211 11111111110
Q ss_pred cCCCCCCcccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHcCCccceeccCCcchhH
Q 014702 172 DCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQ 251 (420)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~ 251 (420)
. +... ...... .+.++.+...+...+++++.... ...+++.+.++++.++++|.+|.+|+........
T Consensus 127 ~---~~~~-----~~~~~~---~~~v~~l~~~G~~~iKi~~~~~~-~~~~~~~l~~~~~~a~~~g~~V~~Hae~~~~i~~ 194 (477)
T PRK13404 127 L---IVAD-----PTEEVL---TEELPALIAQGYTSFKVFMTYDD-LKLDDRQILDVLAVARRHGAMVMVHAENHDMIAW 194 (477)
T ss_pred E---EecC-----CChhhH---HHHHHHHHHcCCCEEEEEecCCC-CCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHH
Confidence 0 0000 011111 11233333445566777654322 3567788999999999999999999976543221
Q ss_pred HHHhh--cC-------CCCChH--------HHHHHhccCCCccceeeccCCC-hhhHHHHHhcC--CeEEECccchhhc-
Q 014702 252 VVMDT--RK-------VDHGTV--------TFLDKIEFLQNNLLSAHTVWVN-HTEIGLLSRAG--VKVSHCPASAMRM- 310 (420)
Q Consensus 252 ~~~~~--~~-------~~~~~~--------~~l~~~~~~~~~~~~~h~~~~~-~~~~~~~~~~~--~~~~~~p~~~~~~- 310 (420)
..... .+ ....+. ..+......+.+..+.|...-. -+.+..+++.| +.+.+||.+....
T Consensus 195 ~~~~~~~~G~~~~~~~~~~rp~~~E~~~v~~~~~la~~~g~~~hi~Hvs~~~~~~~i~~~k~~g~~vt~e~~ph~L~l~~ 274 (477)
T PRK13404 195 LTKRLLAAGLTAPKYHAISRPMLAEREATHRAIALAELVDVPILIVHVSGREAAEQIRRARGRGLKIFAETCPQYLFLTA 274 (477)
T ss_pred HHHHHHHCCCcchhhccccCCHHHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEEChhhhccCH
Confidence 11010 00 000010 1112222333343344444211 13345556666 4466788653210
Q ss_pred ----c---------Ccc---------cHHHHHHcCCcEEEccCCCCCCCC-----------CCHH--------HHHHHHH
Q 014702 311 ----L---------GFA---------PIKEMLHADICVSLGTDGAPSNNR-----------MSIV--------DEMYLAS 349 (420)
Q Consensus 311 ----~---------~~~---------~~~~~~~~gv~~~lgsD~~~~~~~-----------~~~~--------~~~~~~~ 349 (420)
. -.+ .+.+.+.+|...+++|||.|+... .+++ -++....
T Consensus 275 ~~~~~~~~~g~~~k~~Pplr~~~d~~aL~~~l~~G~id~i~sDHap~~~~eK~~~~~~~~~~~~~~~~~G~~gie~~l~~ 354 (477)
T PRK13404 275 EDLDRPGMEGAKYICSPPPRDKANQEAIWNGLADGTFEVFSSDHAPFRFDDTDGKLAAGANPSFKAIANGIPGIETRLPL 354 (477)
T ss_pred HHhcCccccCCceEECCCCCChHHHHHHHHHHhCCCceEEecCCCCCCcccchhhhhccCCCCHhhCCCCcccHHHHHHH
Confidence 0 122 344567889999999999987411 0111 1122223
Q ss_pred HHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEcCCCCC
Q 014702 350 LINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWP 411 (420)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~ 411 (420)
+++... ...++|++++++++|.|||+++|+.+++|+|++|++||||++|.+..+
T Consensus 355 ll~~~v--------~~~~ls~~~~~~~~t~~pA~~lgl~~~~G~i~~G~~ADlvivd~~~~~ 408 (477)
T PRK13404 355 LFSEGV--------VKGRISLNRFVALTSTNPAKLYGLYPRKGAIAIGADADIAIWDPDREV 408 (477)
T ss_pred HHHHHH--------HcCCCCHHHHHHHHHHHHHHHhCCCCCCceecCCCcCCEEEEcCCccE
Confidence 332211 123599999999999999999999666899999999999999988543
No 55
>PRK10657 isoaspartyl dipeptidase; Provisional
Probab=99.97 E-value=1.7e-29 Score=237.21 Aligned_cols=320 Identities=22% Similarity=0.270 Sum_probs=194.9
Q ss_pred ceEEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhcccC
Q 014702 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (420)
Q Consensus 19 ~~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~~ 98 (420)
++++|+|++|++.+. ..+++|+|+||+|++|++..+.+.. ....++||++|++|+|||||+|+|+.... .
T Consensus 1 ~~~~i~~~~v~~~~~----~~~~~i~i~~g~I~~v~~~~~~~~~--~~~~~~id~~g~~v~PG~id~H~H~~~~~----~ 70 (388)
T PRK10657 1 MFTLLKNAHVYAPED----LGKKDILIAGGKIIAIADNINIPDI--VPDIEVIDASGKILVPGFIDQHVHIIGGG----G 70 (388)
T ss_pred CeEEEEccEEECCCC----CcceEEEEECCEEEEecCCcccccc--CCCCeEEECCCCEEcccceeeeeCcccCC----C
Confidence 358999999996542 3568999999999999875432110 12468999999999999999999985211 0
Q ss_pred CCCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCc-----cCH---HHHHHHHHHhCCeeEeeehh
Q 014702 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-----QHV---SEMAKAVELLGLRACLVQST 170 (420)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~-----~~~---~~~~~~~~~~g~~~~~~~~~ 170 (420)
+.. | ...+. + ....+++++|+||++++.+ ... ....+.....|++.+.....
T Consensus 71 -~~~---~---------~~~t~-~------~~~~~~~~~GvTTvvd~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~~~~ 130 (388)
T PRK10657 71 -EGG---F---------STRTP-E------VQLSDLTEAGITTVVGLLGTDGITRSMESLLAKARALEEEGISAYMYTGS 130 (388)
T ss_pred -Ccc---c---------ccCCH-H------HHHHHHHhCCceEEECCCCCCCCCCCHHHHHHHHHHHHhhCCEEEEEecC
Confidence 000 0 00111 1 2456778999999999873 122 33455666889998855433
Q ss_pred ccCCCCCCcccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHcCC------ccceecc
Q 014702 171 MDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKT------GIHMHVA 244 (420)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~------~v~~h~~ 244 (420)
+.. +..+. .....+.....+++... + +..+..+.....+++.+.++.++++..+. ++++|+.
T Consensus 131 ~~~----~~~~~----~~~~~~~~~~~~~~~g~--g--~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~~g~~~~i~vH~~ 198 (388)
T PRK10657 131 YHV----PVRTI----TGSIRKDIVLIDKVIGV--G--EIAISDHRSSQPTVEELARLAAEARVGGLLSGKAGIVHVHMG 198 (388)
T ss_pred CCC----Cchhh----hcchhhceehhhhhhCc--c--eeeeccCCCCCCCHHHHHHHHHHHHHHHHhcCCCCEEEEEeC
Confidence 221 11100 11111111222222211 1 23345555556688888888888775444 7999987
Q ss_pred CCcchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccC---CChhhHHHHHhcCCeEEEC-ccchhhc----cCcccH
Q 014702 245 EIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVW---VNHTEIGLLSRAGVKVSHC-PASAMRM----LGFAPI 316 (420)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~---~~~~~~~~~~~~~~~~~~~-p~~~~~~----~~~~~~ 316 (420)
+.....+.. .+++...+....+.+..|+.. ..++.++.++ .|..+.+. +....+. .....+
T Consensus 199 ~~~~~l~~v----------~~~l~~~Gv~~~~~~~~H~~~~~~~~~~~~~~~~-~G~~~~v~~~~~~~~~~~~~~~~~~l 267 (388)
T PRK10657 199 DGKKGLQPL----------FELLENTDIPISQFLPTHVNRNEPLFEQALEFAK-KGGVIDLTTSDPDFLGEGEVAPAEAL 267 (388)
T ss_pred CchHHHHHH----------HHHHHhcCCCcceeeCcccCCCHHHHHHHHHHHH-cCCeEEEecCCCcccccCccCHHHHH
Confidence 543322111 123445565555555666665 2234444444 56555322 2221111 123457
Q ss_pred HHHHHcCC---cEEEccCCCCCCCCC---------------CHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHh
Q 014702 317 KEMLHADI---CVSLGTDGAPSNNRM---------------SIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMAT 378 (420)
Q Consensus 317 ~~~~~~gv---~~~lgsD~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T 378 (420)
++++++|+ +++++||+....+.. .+...+..+.. ..++|++++++++|
T Consensus 268 ~~~~~~G~~~d~v~l~tD~~~~~~~~~~~g~~~~~g~~~~~~l~~~~~~~~~--------------~~gis~~~~l~~aT 333 (388)
T PRK10657 268 KRALEAGVPLSRVTLSSDGNGSLPKFDEDGNLVGLGVGSVESLLEEVRELVK--------------DEGLPLEDALKPLT 333 (388)
T ss_pred HHHHHcCCChhheEEECCCCCCCceeccCCCEeccCcCchhhHHHHHHHHHH--------------hcCCCHHHHHHHHH
Confidence 78999998 789999975332111 13344443321 13599999999999
Q ss_pred HHHHHHccCCCcccccccCccccEEEEc
Q 014702 379 INGAKSVLWDNDIGSLEAGKKADMVVVD 406 (420)
Q Consensus 379 ~~~A~~lgl~~~~G~l~~G~~ADlvv~d 406 (420)
.|||+++|+++ +|+|++|+.|||++||
T Consensus 334 ~npA~~lg~~~-~G~l~~G~~AD~vv~~ 360 (388)
T PRK10657 334 SNVARFLKLNG-KGEILPGKDADLLVLD 360 (388)
T ss_pred HHHHHHhCCCC-CCccCCCCccCEEEEC
Confidence 99999999976 7999999999999999
No 56
>PRK13985 ureB urease subunit beta; Provisional
Probab=99.97 E-value=4.8e-29 Score=230.89 Aligned_cols=332 Identities=17% Similarity=0.169 Sum_probs=185.3
Q ss_pred CCceEEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhh-------hhccCCCcEEeCCCcEEeeccccccccc
Q 014702 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQ-------QFSQMADQIIDLQSQILLPGFVNTHVHT 89 (420)
Q Consensus 17 ~~~~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~-------~~~~~~~~~iD~~g~~v~PGfID~H~H~ 89 (420)
+..|++|+|++|++ ..+ +..++|.|+||+|++|++...... -..+.++++||++|++|+|||||+|+|+
T Consensus 63 ~~~DlVI~Na~IiD--~~g--i~kaDI~IkdGrIaaIG~~gn~~~~~~v~~~~~ig~~tevIDa~G~iV~PG~ID~HvH~ 138 (568)
T PRK13985 63 EELDLIITNALIID--YTG--IYKADIGIKDGKIAGIGKGGNKDMQDGVKNNLSVGPATEALAGEGLIVTAGGIDTHIHF 138 (568)
T ss_pred CcCCEEEECeEEEC--CCC--cEEEEEEEECCEEEEeecCCCccccccccccccCCCCceEEECCCCEEEeCEEEeeCCC
Confidence 46799999999994 322 356799999999999998532110 0012367999999999999999999998
Q ss_pred chhhhcccCCCCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCccC------------H---HHHH
Q 014702 90 SQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH------------V---SEMA 154 (420)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~~------------~---~~~~ 154 (420)
.. + . . ...++.+||||++++|... . ..+.
T Consensus 139 ~~------------------------P---~-~--------~~~AlagGVTTvI~~G~gP~~~T~p~~~tpg~~~i~~ml 182 (568)
T PRK13985 139 IS------------------------P---Q-Q--------IPTAFASGVTTMIGGGTGPADGTNATTITPGRRNLKWML 182 (568)
T ss_pred CC------------------------c---c-H--------HHHHhcCceEEEEccCcCCCCCCCCcCCCCcHHHHHHHH
Confidence 21 1 1 0 1247899999999853111 1 2233
Q ss_pred HHHHHhCCeeEeeehhccCCCCCCcccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHH
Q 014702 155 KAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMARE 234 (420)
Q Consensus 155 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~ 234 (420)
+......+...+ . +.+.. ....+..+ +... +.+. +..+..+..++..+.++++.+.+
T Consensus 183 ~~a~~~pvn~gf----~--gkG~~---------~~l~eL~e----l~~a--GA~G--fK~~ed~g~t~~~I~~aL~vA~~ 239 (568)
T PRK13985 183 RAAEEYSMNLGF----L--GKGNS---------SNDASLAD----QIEA--GAIG--FKIHEDWGTTPSAINHALDVADK 239 (568)
T ss_pred HHhhccCccEEE----e--cCCcc---------CCHHHHHH----HHHc--CCEE--EEECCccCCCHHHHHHHHHHHHH
Confidence 333322222111 1 01110 01122222 2222 3333 23334446788899999999999
Q ss_pred cCCccceeccCCcchhH---HHHhhcC--------CCCC---hHHHHHHhccCCCccceeeccCCC-hhhHHHHHhcCCe
Q 014702 235 FKTGIHMHVAEIPYENQ---VVMDTRK--------VDHG---TVTFLDKIEFLQNNLLSAHTVWVN-HTEIGLLSRAGVK 299 (420)
Q Consensus 235 ~~~~v~~h~~~~~~~~~---~~~~~~~--------~~~~---~~~~l~~~~~~~~~~~~~h~~~~~-~~~~~~~~~~~~~ 299 (420)
+++++.+|+.......- ......+ .+.+ ..+++...+. ..++.-....+ |-.++-+.++--.
T Consensus 240 ~dv~V~iHtdtlne~g~~E~t~aa~~gr~iH~~H~egaggghapdi~~~~~~---~nvlp~stnpt~p~t~nt~~e~~dm 316 (568)
T PRK13985 240 YDVQVAIHTDTLNEAGCVEDTMAAIAGRTMHTFHTEGAGGGHAPDIIKVAGE---HNILPASTNPTIPFTVNTEAEHMDM 316 (568)
T ss_pred cCCEEEEeCCCCCCchhhHHHHHHhcCCeEEEEeccCCCccchhhHHHHcCC---CCcccCCCCCCCCCccCchhhhcCe
Confidence 99999999977542210 0000000 0000 0111111111 00000000000 0000111111111
Q ss_pred EEECccch-------------hhccCcccHHHHHHcCCcEEEccCCCCCCCCCCH-HHHHHHHHHHhcccccccCCCCCC
Q 014702 300 VSHCPASA-------------MRMLGFAPIKEMLHADICVSLGTDGAPSNNRMSI-VDEMYLASLINKGREVFANGTTDP 365 (420)
Q Consensus 300 ~~~~p~~~-------------~~~~~~~~~~~~~~~gv~~~lgsD~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 365 (420)
+.+|...+ .|...+..-.-|.+.|+..+++||....+.-... .+.++.+..+.+.+..+.......
T Consensus 317 ~m~~h~l~~~~~ed~afa~srir~~tiaaed~l~d~G~~s~~~SDs~~mgr~ge~~~r~~q~a~k~~~~~g~l~~~~~~~ 396 (568)
T PRK13985 317 LMVCHHLDKSIKEDVQFADSRIRPQTIAAEDTLHDMGIFSITSSDSQAMGRVGEVITRTWQTADKNKKEFGRLKEEKGDN 396 (568)
T ss_pred EEeecCCCCCCcchhhhhhhhccccccccCchhhhCCcEEEEeccchhhCcccceeeehHHHHHHHHHhcCCCCCccccc
Confidence 22222111 1112223334578899999999998754322222 133344443333233333332334
Q ss_pred CCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEcCCCCCCCC
Q 014702 366 AALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVP 414 (420)
Q Consensus 366 ~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~ 414 (420)
..++++++|+++|.|||+++|+++++|+|++||.|||||||.++|...|
T Consensus 397 dnl~v~eAL~~yTin~A~A~G~e~~vGSLe~GK~ADlVv~d~d~f~~~p 445 (568)
T PRK13985 397 DNFRIKRYLSKYTINPAIAHGISEYVGSVEVGKVADLVLWSPAFFGVKP 445 (568)
T ss_pred cccCHHHHHHHHhHHHHHHcCcccCceeECCCCccCEEEEcCccCCCCh
Confidence 6799999999999999999999999999999999999999999988644
No 57
>PLN02795 allantoinase
Probab=99.97 E-value=1.7e-29 Score=241.54 Aligned_cols=336 Identities=17% Similarity=0.167 Sum_probs=191.6
Q ss_pred CceEEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhccc
Q 014702 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (420)
Q Consensus 18 ~~~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~ 97 (420)
+.|++|+|++|++.+ + ...++|+|+||+|++|++....+.. ..+.++||++|++|+|||||+|+|+...
T Consensus 43 ~~~~vi~~~~vv~~~--~--~~~~~v~i~dG~I~~I~~~~~~~~~--~~~~~~ida~G~~v~PG~ID~H~H~~~~----- 111 (505)
T PLN02795 43 WPHFVLYSKRVVTPA--G--VIPGAVEVEGGRIVSVTKEEEAPKS--QKKPHVLDYGNAVVMPGLIDVHVHLNEP----- 111 (505)
T ss_pred ccceEEECCEEEECC--C--eEEEEEEEECCEEEEecCccccccc--cCCCEEEECCCCEEecCEEecccCcCCC-----
Confidence 369999999999633 2 2458999999999999975321110 0246899999999999999999998320
Q ss_pred CCCCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCc-cC----HHHHHHHHHHhCCeeEeeehhcc
Q 014702 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-QH----VSEMAKAVELLGLRACLVQSTMD 172 (420)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~-~~----~~~~~~~~~~~g~~~~~~~~~~~ 172 (420)
.... +.......+.++.+|||+++++.. .. ..+..+...+. .......+
T Consensus 112 -------------------~~~~---~e~~~~~~~aa~~gGvTtv~dmp~~~~P~~~~~~~~~~~~~~----~~~~~~vd 165 (505)
T PLN02795 112 -------------------GRTE---WEGFPTGTKAAAAGGITTLVDMPLNSFPSTTSVETLELKIEA----AKGKLYVD 165 (505)
T ss_pred -------------------Cccc---hhHHHHHHHHHHcCCcEEEECCCCCCCCCCChHHHHHHHHHH----hccCceee
Confidence 0011 112223456777899999999972 21 12222222221 11111111
Q ss_pred CCCCCCcccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeecccc---ccCHHHHHHHHHHHHHcCCccceeccCCcch
Q 014702 173 CGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIM---NATDRLLLETRDMAREFKTGIHMHVAEIPYE 249 (420)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~ 249 (420)
.+.. ..... ...... +.+.++...+...++.++.++..+ ..+.+.+.++++.++++++++++|+......
T Consensus 166 ~~~~--~~~~~-~~~~~~----~~l~~~~~~G~~g~k~f~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~iH~E~~~l~ 238 (505)
T PLN02795 166 VGFW--GGLVP-ENAHNA----SVLEELLDAGALGLKSFMCPSGINDFPMTTATHIKAALPVLAKYGRPLLVHAEVVSPV 238 (505)
T ss_pred eece--ecccC-cchhHH----HHHHHHHHCCCcEEEEEecccCCCCcccCCHHHHHHHHHHHHHhCCEEEEecCChhHh
Confidence 1111 00000 011111 222222223332366655554433 4677899999999999999999999875532
Q ss_pred hHHHHhhcC-------CCCCh--------HHHHHHhccC-------CCccceeeccCCCh-hh---HHHHHhcC--CeEE
Q 014702 250 NQVVMDTRK-------VDHGT--------VTFLDKIEFL-------QNNLLSAHTVWVNH-TE---IGLLSRAG--VKVS 301 (420)
Q Consensus 250 ~~~~~~~~~-------~~~~~--------~~~l~~~~~~-------~~~~~~~h~~~~~~-~~---~~~~~~~~--~~~~ 301 (420)
........+ ...++ ..++...... +.+..+.|... . +. ++.+++.| +++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~rP~~aE~~ai~~~~~la~~~~~~~~~~g~~lhi~HiSt--~~~~~e~i~~ak~~G~~Vt~E 316 (505)
T PLN02795 239 ESDSRLDADPRSYSTYLKSRPPSWEQEAIRQLLEVAKDTRPGGVAEGAHVHIVHLSD--AESSLELIKEAKAKGDSVTVE 316 (505)
T ss_pred hhhhhhhcCCcChhHhcccCCHHHHHHHHHHHHHHHHHhhhcccCCCCCEEEEECCC--hHHHHHHHHHHHHCCCcEEEE
Confidence 100000000 00010 0111112222 33444444432 2 33 45556666 6677
Q ss_pred ECccchhhc-----------cCcccH---------HHHHHcCCcEEEccCCCCCCCCC------CHHH--------HHHH
Q 014702 302 HCPASAMRM-----------LGFAPI---------KEMLHADICVSLGTDGAPSNNRM------SIVD--------EMYL 347 (420)
Q Consensus 302 ~~p~~~~~~-----------~~~~~~---------~~~~~~gv~~~lgsD~~~~~~~~------~~~~--------~~~~ 347 (420)
+||.+.... .-.+|+ .+.+..|...+++|||.|+.... +++. +...
T Consensus 317 v~ph~L~l~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~i~sDHap~~~~~K~~~~~~~~~a~~G~~gle~~l 396 (505)
T PLN02795 317 TCPHYLAFSAEEIPDGDTRYKCAPPIRDAANRELLWKALLDGDIDMLSSDHSPSPPDLKLLEEGNFLRAWGGISSLQFVL 396 (505)
T ss_pred eChhhhcccHHHccCCCCceEEcCCCCChHHHHHHHHHHhCCCceEEecCCCCCChHHhccCcCCHhhCCCCceeHHHHH
Confidence 888643210 112344 34667899999999999874211 1110 0111
Q ss_pred HHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEcCCC
Q 014702 348 ASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFS 409 (420)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~ 409 (420)
..++... ...++|++++++++|.|||+++|+ +++|+|++|++|||||||++.
T Consensus 397 ~~~~~~~---------~~~~l~l~~~v~~~s~~pA~~~gl-~~~G~l~~G~~ADlvi~d~~~ 448 (505)
T PLN02795 397 PATWTAG---------RAYGLTLEQLARWWSERPAKLAGL-DSKGAIAPGKDADIVVWDPEA 448 (505)
T ss_pred HHHHHHH---------HHcCCCHHHHHHHHHHHHHHHhCC-CCCCccCCCCccCEEEEcCCc
Confidence 1112111 124599999999999999999999 457999999999999999874
No 58
>PRK07575 dihydroorotase; Provisional
Probab=99.97 E-value=4.6e-30 Score=242.66 Aligned_cols=325 Identities=16% Similarity=0.221 Sum_probs=186.0
Q ss_pred CCceEEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhcc
Q 014702 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (420)
Q Consensus 17 ~~~~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~ 96 (420)
+|++++|+|++|++.+ + ....++|+|+||+|++|++....+ ...++||++|++|+|||||+|+|+...
T Consensus 1 ~~~~~~i~~~~i~~~~--~-~~~~~~I~I~dg~I~~ig~~~~~~-----~~~~vid~~g~~v~PG~ID~H~H~~~~---- 68 (438)
T PRK07575 1 MMMSLLIRNARILLPS--G-ELLLGDVLVEDGKIVAIAPEISAT-----AVDTVIDAEGLTLLPGVIDPQVHFREP---- 68 (438)
T ss_pred CcceEEEECCEEECCC--C-CEEeeeEEEECCEEEEecCCCCCC-----CCCeEEECCCCEEcccEEEeeeccCCC----
Confidence 3568999999999643 2 235689999999999998753210 135899999999999999999997310
Q ss_pred cCCCCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCccC-----HHHH---HHHH-HHhCCeeEee
Q 014702 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-----VSEM---AKAV-ELLGLRACLV 167 (420)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~~-----~~~~---~~~~-~~~g~~~~~~ 167 (420)
.....+.+. ...+.++++|||++.+++... .... .+.+ ....++..+.
T Consensus 69 --------------------~~~~~e~~~---~~~~aa~~gGvTt~~dmp~~~p~~~~~~~~~~~~~~a~~~~~v~~~~~ 125 (438)
T PRK07575 69 --------------------GLEHKEDLF---TASRACAKGGVTSFLEMPNTKPLTTTQAALDDKLARAAEKCVVNYGFF 125 (438)
T ss_pred --------------------CCcCcchHH---HHHHHHHhCCEEEEEECCCCCCCCCcHHHHHHHHHHhccCcEEEEEEE
Confidence 011111122 233467899999999987421 1111 1111 1122221111
Q ss_pred ehhc----------cCCCCCCcc----ccc--CChhHHHHHHHHHHHHhcCCCCCceEEEEeecc--------------c
Q 014702 168 QSTM----------DCGEGLPAS----WAV--RTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQ--------------I 217 (420)
Q Consensus 168 ~~~~----------~~~~~~~~~----~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--------------~ 217 (420)
.... ....+.... ... ...... ....+... ...+..+..-.. .
T Consensus 126 ~~~~~~~l~~l~~~~~~~g~~~f~~~~~~~~~~~~~~~---~~~~~~~~----~~~v~~h~e~~~l~~~~~~~~~g~~~~ 198 (438)
T PRK07575 126 IGATPDNLPELLTANPTCGIKIFMGSSHGPLLVDEEAA---LERIFAEG----TRLIAVHAEDQARIRARRAEFAGISDP 198 (438)
T ss_pred ccccccCHHHHHHhhCCeEEEEEEeeCCCCcccCcHHH---HHHHHHhC----CCEEEEeCcChHHHHhhhHhhccCcCc
Confidence 0000 000000000 000 000000 01111111 011111110000 0
Q ss_pred -----cccCH---HHHHHHHHHHHHcCCccce-eccCCcchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCCChh
Q 014702 218 -----MNATD---RLLLETRDMAREFKTGIHM-HVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHT 288 (420)
Q Consensus 218 -----~~~~~---~~l~~~~~~a~~~~~~v~~-h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~ 288 (420)
..... +.+.++++++++.++++++ |+. +....+...+.++ .... ..++.|..+++++
T Consensus 199 ~~~~~~~p~~aE~~av~~~~~la~~~g~~lhi~HiS-t~~~v~~i~~~k~------------~~vt-~ev~phhL~l~~~ 264 (438)
T PRK07575 199 ADHSQIQDEEAALLATRLALKLSKKYQRRLHILHLS-TAIEAELLRQDKP------------SWVT-AEVTPQHLLLNTD 264 (438)
T ss_pred ccccccCcHHHHHHHHHHHHHHHHHHCCCEEEEECC-CHHHHHHHHHhcC------------CCEE-EEEchhhheeCHH
Confidence 01111 4567788888889999888 776 4443333332211 0111 1245566888888
Q ss_pred hHHHHHhcCCeEEECccchhhccCcccHHHHHHcCCcEEEccCCCCCCC----------CCCH-HHHHHHHHHHhccccc
Q 014702 289 EIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHADICVSLGTDGAPSNN----------RMSI-VDEMYLASLINKGREV 357 (420)
Q Consensus 289 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~gv~~~lgsD~~~~~~----------~~~~-~~~~~~~~~~~~~~~~ 357 (420)
++.. .+....++|..... ....++.+.+++|+.++|+|||.|++. ...+ ..++....++....
T Consensus 265 ~~~~---~~~~~k~~PPLR~~-~d~~~L~~~l~~G~id~i~sDh~p~~~~~k~~~~~~~~~G~~g~e~~l~~l~~~~~-- 338 (438)
T PRK07575 265 AYER---IGTLAQMNPPLRSP-EDNEALWQALRDGVIDFIATDHAPHTLEEKAQPYPNSPSGMPGVETSLPLMLTAAM-- 338 (438)
T ss_pred HHhC---CCceEEEeCCCCCH-HHHHHHHHHHhCCCCCEEecCCCCCCHHHccCCcccCCCCcccHHHHHHHHHHHHh--
Confidence 7653 45556667762211 345678889999999999999998752 1111 23344444443321
Q ss_pred ccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEcCCCCC
Q 014702 358 FANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWP 411 (420)
Q Consensus 358 ~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~ 411 (420)
..++|++++++++|.|||+++|+.+ +|+|++|++|||||||++..+
T Consensus 339 -------~~~lsl~~~~~~~s~npAk~lgl~~-~G~L~~G~~ADlvi~D~~~~~ 384 (438)
T PRK07575 339 -------RGKCTVAQVVRWMSTAVARAYGIPN-KGRIAPGYDADLVLVDLNTYR 384 (438)
T ss_pred -------cCCCCHHHHHHHHhhhHHHHcCCCC-CCccCCCCcCCEEEEcCCCCE
Confidence 2359999999999999999999954 699999999999999988654
No 59
>PRK06189 allantoinase; Provisional
Probab=99.97 E-value=2.1e-29 Score=239.57 Aligned_cols=328 Identities=18% Similarity=0.209 Sum_probs=186.8
Q ss_pred CCceEEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhcc
Q 014702 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (420)
Q Consensus 17 ~~~~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~ 96 (420)
|++|++|+|++|++.++ ...++|+|+||+|++|++.... ...++||++|++|+|||||+|+|+...
T Consensus 1 ~~~~~~i~~~~v~~~~~----~~~~~v~i~~G~I~~i~~~~~~------~~~~~iD~~g~~vlPG~ID~H~H~~~~---- 66 (451)
T PRK06189 1 MMYDLIIRGGKVVTPEG----VYRADIGIKNGKIAEIAPEISS------PAREIIDADGLYVFPGMIDVHVHFNEP---- 66 (451)
T ss_pred CCccEEEECCEEEcCCC----cEEEEEEEECCEEEEecCCCCC------CCCeEEECCCCEEecCEEEeeeccCCC----
Confidence 45789999999996432 2468999999999999875321 256899999999999999999998321
Q ss_pred cCCCCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCC-cc-----CHHHHHHHHHHhCCeeEeeehh
Q 014702 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG-GQ-----HVSEMAKAVELLGLRACLVQST 170 (420)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~-~~-----~~~~~~~~~~~~g~~~~~~~~~ 170 (420)
.....+.+. ...+.++.+|+|++++++ +. .....................+
T Consensus 67 --------------------~~~~~~~~~---~~~~aa~~gGvTt~~~~p~~t~p~~~~~~~~~~~~~~~~~~~~~d~~~ 123 (451)
T PRK06189 67 --------------------GRTHWEGFA---TGSAALAAGGCTTYFDMPLNSIPPTVTREALDAKAELARQKSAVDFAL 123 (451)
T ss_pred --------------------CCCCcccHH---HHHHHHHhCCEEEEEECCCCCCCCCCcHHHHHHHHHHhCcCceEeEEE
Confidence 001111111 233578899999999885 21 1122222222222222221111
Q ss_pred ccCCCCCCcccccCChhHHHHHHHHHHHHhcCCCCCceEEEEee---ccccccCHHHHHHHHHHHHHcCCccceeccCCc
Q 014702 171 MDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGI---RQIMNATDRLLLETRDMAREFKTGIHMHVAEIP 247 (420)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~ 247 (420)
. . +.. .....+.. .+...+...++++... ......+...+.++++.+.+.+..+.+|+....
T Consensus 124 ~-~--~~~--------~~~~~~l~----~l~~~Gv~~~k~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~e~~~ 188 (451)
T PRK06189 124 W-G--GLV--------PGNLEHLR----ELAEAGVIGFKAFMSNSGTDEFRSSDDLTLYEGMKEIAALGKILALHAESDA 188 (451)
T ss_pred E-e--ccc--------ccCHHHHH----HHHHcCCcEEEEEccccCCCCcCcCCHHHHHHHHHHHHhcCCeEEEECCChH
Confidence 1 0 000 00122222 2222333334443322 122235666788888888889999999997654
Q ss_pred chhHHHHh--hcC-------CCCCh-----H---HHHHHhccCCCccceeeccCCCh-hh---HHHHHhcC--CeEEECc
Q 014702 248 YENQVVMD--TRK-------VDHGT-----V---TFLDKIEFLQNNLLSAHTVWVNH-TE---IGLLSRAG--VKVSHCP 304 (420)
Q Consensus 248 ~~~~~~~~--~~~-------~~~~~-----~---~~l~~~~~~~~~~~~~h~~~~~~-~~---~~~~~~~~--~~~~~~p 304 (420)
........ ..+ ....+ . ..+......+.+ .|..|++. +. +..+++.| +++.+||
T Consensus 189 ~~~~~~~~~~~~g~~~~~~~~~~~P~~~E~~~v~~~l~la~~~g~~---~hi~HiSt~~~~~~i~~~k~~g~~vt~ev~p 265 (451)
T PRK06189 189 LTRHLTTQARQQGKTDVRDYLESRPVVAELEAVQRALLYAQETGCP---LHFVHISSGKAVALIAEAKKRGVDVSVETCP 265 (451)
T ss_pred HHHHHHHHHHhcCCCChhHccccCCHHHHHHHHHHHHHHHHHhCCC---EEEEECCCHHHHHHHHHHHHCCCcEEEEeCH
Confidence 32211100 000 00010 0 112222233333 34444443 33 34445555 5566788
Q ss_pred cchhhc-----------cCc---------ccHHHHHHcCCcEEEccCCCCCCCC----CCHHHH--------HHHHHHHh
Q 014702 305 ASAMRM-----------LGF---------APIKEMLHADICVSLGTDGAPSNNR----MSIVDE--------MYLASLIN 352 (420)
Q Consensus 305 ~~~~~~-----------~~~---------~~~~~~~~~gv~~~lgsD~~~~~~~----~~~~~~--------~~~~~~~~ 352 (420)
.+.... ... .++.+++++|+.++|+|||.|+... .+++.. .....++.
T Consensus 266 h~L~l~~~~~~~~~~~~~~~Pplr~~~~~~~L~~~l~~G~i~~i~sDh~p~~~~~K~~~~~~~~~~G~~g~e~~l~~~~~ 345 (451)
T PRK06189 266 HYLLFTEEDFERIGAVAKCAPPLRSRSQKEELWRGLLAGEIDMISSDHSPCPPELKEGDDFFLVWGGISGGQSTLLVMLT 345 (451)
T ss_pred HHhhcCHhHhhCcCCceEEeCCCCChhhHHHHHHHHhCCCceEEECCCCCCCHHHcCcCCcccCCCCceeHHHHHHHHHH
Confidence 643100 012 3445678899999999999886421 122211 22222222
Q ss_pred cccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEcCC
Q 014702 353 KGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPF 408 (420)
Q Consensus 353 ~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~ 408 (420)
.. ....++|++++++++|.|||+++|+. ++|+|++|++|||+|||++
T Consensus 346 ~~--------~~~~~l~~~~~~~~~t~npA~~lgl~-~~G~l~~G~~ADlvi~d~~ 392 (451)
T PRK06189 346 EG--------YIERGIPLETIARLLATNPAKRFGLP-QKGRLEVGADADFVLVDLD 392 (451)
T ss_pred HH--------HhcCCCCHHHHHHHHhhhHHHHhCCC-CCCcccCCCcCCEEEEcCC
Confidence 11 01235999999999999999999994 5799999999999999997
No 60
>TIGR03178 allantoinase allantoinase. This enzyme carries out the first step in the degradation of allantoin, a ring-opening hydrolysis. The seed members of this model are all in the vicinity of other genes involved in the processes of xanthine/urate/allantoin catabolism. Although not included in the seed, many eukaryotic homologs of this family are included above the trusted cutoff. Below the noise cutoff are related hydantoinases.
Probab=99.97 E-value=1.6e-29 Score=240.24 Aligned_cols=328 Identities=19% Similarity=0.207 Sum_probs=184.7
Q ss_pred eEEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhcccCC
Q 014702 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (420)
Q Consensus 20 ~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~~~ 99 (420)
|++|+|++|+++++ ...++|+|+||+|++|++... + .+.++||++|++|+|||||+|+|+....
T Consensus 1 dl~i~~~~v~~~~~----~~~~~v~i~dg~I~~i~~~~~-----~-~~~~~id~~g~~v~PG~ID~H~H~~~~~------ 64 (443)
T TIGR03178 1 DLIIRGGRVILPNG----EREADVGVKGGKIAAIGPDIL-----G-PAAKIIDAGGLVVFPGVVDTHVHINEPG------ 64 (443)
T ss_pred CEEEECcEEECCCC----ceEEEEEEECCEEEEeeCCCC-----C-CCCeEEECCCCEEeccEeccccccCCCC------
Confidence 57999999996542 245899999999999987521 1 3668999999999999999999984210
Q ss_pred CCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCC-cc--C--HHHHHHHHHHhC-CeeEeeehhccC
Q 014702 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG-GQ--H--VSEMAKAVELLG-LRACLVQSTMDC 173 (420)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~-~~--~--~~~~~~~~~~~g-~~~~~~~~~~~~ 173 (420)
....+ ......+.++++|||++.+++ +. . ..+......+.. .......... .
T Consensus 65 ------------------~~~~~---~~~~~~~~~~~gGvTtv~dmp~~~~p~~~~~~~~~~~~~~~~~~~~~d~~~~-~ 122 (443)
T TIGR03178 65 ------------------RTEWE---GFETGTRAAAAGGITTYIDMPLNSIPATTTRASLEAKFEAAKGKLAVDVGFW-G 122 (443)
T ss_pred ------------------ccccc---hHHHHHHHHHcCCeEEEEECCCCCCCCCCcHHHHHHHHHHhccCCceeEEEE-e
Confidence 00001 111244568899999999987 21 1 111121111111 1111111111 0
Q ss_pred CCCCCcccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeecc---ccccCHHHHHHHHHHHHHcCCccceeccCCcchh
Q 014702 174 GEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQ---IMNATDRLLLETRDMAREFKTGIHMHVAEIPYEN 250 (420)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~ 250 (420)
+ .. .....+ +..+...+...++++++..+ ....+.+.+.++++.+++.|+++.+|+.......
T Consensus 123 ~--~~--------~~~~~~----i~~~~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~E~~~~~~ 188 (443)
T TIGR03178 123 G--LV--------PYNLDD----LRELDEAGVVGFKAFLSPSGDDEFPHVDDWQLYKGMRELARLGQLLLVHAENPAITS 188 (443)
T ss_pred c--cC--------CCCHHH----HHHHHHCCCcEEEEEecccCCCCcccCCHHHHHHHHHHHHhcCCeEEEeccChHHHH
Confidence 0 00 011112 23333344445666554432 2356788899999999999999999964432211
Q ss_pred HHHHhhc--C-------CCCCh-----H---HHHHHhccCCCccceeeccCCCh----hhHHHHHhcCCe--EEECccch
Q 014702 251 QVVMDTR--K-------VDHGT-----V---TFLDKIEFLQNNLLSAHTVWVNH----TEIGLLSRAGVK--VSHCPASA 307 (420)
Q Consensus 251 ~~~~~~~--~-------~~~~~-----~---~~l~~~~~~~~~~~~~h~~~~~~----~~~~~~~~~~~~--~~~~p~~~ 307 (420)
....... + ....+ . ..+......+.+ .|..|++. +.++.+++.|+. +.+||.+.
T Consensus 189 ~~~~~~~~~g~~~~~~~~~~~p~~ae~~~~~~~~~la~~~g~~---vhi~Hiss~~~~~~i~~~~~~g~~it~e~~ph~l 265 (443)
T TIGR03178 189 ALGEEAPPQGGVGADAYLASRPVFAEVEAIRRTLALAKVTGCR---VHVVHLSSAEAVELITEAKQEGLDVTVETCPHYL 265 (443)
T ss_pred HHHHHHHhcCCCChhHhcCcCCHHHHHHHHHHHHHHHHHhCCC---EEEEeCCCHHHHHHHHHHHHCCCcEEEEECccce
Confidence 1100000 0 00001 0 112222223333 34444433 334555666654 44577652
Q ss_pred h------hc-----cCcccH---------HHHHHcCCcEEEccCCCCCCC----CCCHHH--------HHHHHHHHhccc
Q 014702 308 M------RM-----LGFAPI---------KEMLHADICVSLGTDGAPSNN----RMSIVD--------EMYLASLINKGR 355 (420)
Q Consensus 308 ~------~~-----~~~~~~---------~~~~~~gv~~~lgsD~~~~~~----~~~~~~--------~~~~~~~~~~~~ 355 (420)
. .. ...+|+ .+.+++|...+++|||.|+.. ..+++. +......+...
T Consensus 266 ~l~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~i~~i~SDh~p~~~~~K~~~~~~~~~~G~~g~e~~l~~~~~~~- 344 (443)
T TIGR03178 266 TLTAEEVPDGGTLAKCAPPIRDLANQEGLWEALLNGLIDCVVSDHSPCTPDLKRAGDFFKAWGGIAGLQSTLDVMFDEA- 344 (443)
T ss_pred EecHHHhhCcCcceEEcCCCCChHHHHHHHHHHHcCCccEEeCCCCCCChHHcCcCChhhCCCCeeEHHHhHHHHHHHH-
Confidence 1 00 112333 345778999999999987631 111110 00011111100
Q ss_pred ccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEcCC-CCC
Q 014702 356 EVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPF-SWP 411 (420)
Q Consensus 356 ~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~-~~~ 411 (420)
....++|++++++++|.|||+++|+. ++|+|++|+.|||||||.+ +++
T Consensus 345 -------~~~~~l~~~~~~~~~t~~pA~~~g~~-~~G~l~~G~~Ad~vi~d~~~~~~ 393 (443)
T TIGR03178 345 -------VQKRGLPLEDIARLMATNPAKRFGLA-QKGRIAPGKDADFVFVDPDESYT 393 (443)
T ss_pred -------HHhcCCCHHHHHHHHhHHHHHHcCCC-CCCccCCCCcCCEEEEcCCCcEE
Confidence 01235999999999999999999994 5699999999999999986 443
No 61
>PRK07627 dihydroorotase; Provisional
Probab=99.97 E-value=1.5e-29 Score=237.24 Aligned_cols=324 Identities=17% Similarity=0.189 Sum_probs=183.4
Q ss_pred ceEEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhcccC
Q 014702 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (420)
Q Consensus 19 ~~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~~ 98 (420)
++++|+|++|++++ +.....++|+|+||||++|++.... ..+.++||++|++|+|||||+|+|+...
T Consensus 1 m~~~i~~~~v~~~~--~~~~~~~~I~I~~g~I~~i~~~~~~-----~~~~~~iDa~g~~vlPG~iD~H~H~~~~------ 67 (425)
T PRK07627 1 MKIHIKGGRLIDPA--AGTDRQADLYVAAGKIAAIGQAPAG-----FNADKTIDASGLIVCPGLVDLSARLREP------ 67 (425)
T ss_pred CeEEEEeeEEECCC--CCccceeEEEEECCEEEEecCCCcC-----CCCCeEEECCCCEEeccEEeccccccCC------
Confidence 37899999999644 3334678999999999999874221 1367899999999999999999999321
Q ss_pred CCCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCccC----H----HHHHHHHHH-hCCeeEeeeh
Q 014702 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH----V----SEMAKAVEL-LGLRACLVQS 169 (420)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~~----~----~~~~~~~~~-~g~~~~~~~~ 169 (420)
.....+.+ ....+.++.+||||+++++... . ......... .+...+. ..
T Consensus 68 ------------------g~~~~e~~---~t~s~aa~~gGvTtv~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 125 (425)
T PRK07627 68 ------------------GYEYKATL---ESEMAAAVAGGVTSLVCPPDTDPVLDEPGLVEMLKFRARNLNQAHVYP-LG 125 (425)
T ss_pred ------------------CccccCcH---HHHHHHHHhCCeeEEEeCCCCCCCCCCHHHHHHHHHHhhccCceeEEE-eC
Confidence 00110111 1134678899999999876431 1 111111111 1222211 11
Q ss_pred hccCCCCCCcccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHcCCccceeccCCcch
Q 014702 170 TMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYE 249 (420)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~ 249 (420)
....+ . ......+..++ ... +... +.....+..+...+.++++.+++.+..+.+|+......
T Consensus 126 ~~~~g--~--------~~~~~~~i~~l----~~~--G~~~--fk~~~~~~~~~~~l~~~~~~~~~~~~~v~~H~E~~~~~ 187 (425)
T PRK07627 126 ALTVG--L--------KGEVLTEMVEL----TEA--GCVG--FSQANVPVVDTQVLLRALQYASTFGFTVWLRPLDAFLG 187 (425)
T ss_pred eEEcC--C--------CccCHHHHHHH----HhC--CEEE--EEcCCcccCCHHHHHHHHHHHHhcCCEEEEecCChhhh
Confidence 11111 0 01112222222 222 2222 11122234567788888999999999999999764321
Q ss_pred hHHH------HhhcCCCCChH--------HHHHHhccCCCccceeeccCCChhhH---HHHHhcC--CeEEECccchhhc
Q 014702 250 NQVV------MDTRKVDHGTV--------TFLDKIEFLQNNLLSAHTVWVNHTEI---GLLSRAG--VKVSHCPASAMRM 310 (420)
Q Consensus 250 ~~~~------~~~~~~~~~~~--------~~l~~~~~~~~~~~~~h~~~~~~~~~---~~~~~~~--~~~~~~p~~~~~~ 310 (420)
.... .........+. ..+......+.+..+.|.. +.+.+ ...++.| +++.+||.+....
T Consensus 188 ~~~~~~~g~~~~~~~~~~~P~~aE~~av~r~~~la~~~~~~~hi~HvS--s~~~~~~i~~ak~~g~~vt~Ev~ph~L~l~ 265 (425)
T PRK07627 188 RGGVAASGAVASRLGLSGVPVAAETIALHTIFELMRVTGARVHLARLS--SAAGVALVRAAKAEGLPVTCDVGVNHVHLI 265 (425)
T ss_pred hCCCcCCCHhHHHcCCCCCCHHHHHHHHHHHHHHHHHHCCcEEEEeCC--CHHHHHHHHHHHHCCCCeEEEeccchheEe
Confidence 1000 00000111111 1122222334444444443 23334 4445566 5567898754211
Q ss_pred -----------cCccc---------HHHHHHcCCcEEEccCCCCCCC------------CCCHHHHHHHHHHHhcccccc
Q 014702 311 -----------LGFAP---------IKEMLHADICVSLGTDGAPSNN------------RMSIVDEMYLASLINKGREVF 358 (420)
Q Consensus 311 -----------~~~~~---------~~~~~~~gv~~~lgsD~~~~~~------------~~~~~~~~~~~~~~~~~~~~~ 358 (420)
.-.+| +++.+++|...+++|||.|+.. ++.-.+. .....+..
T Consensus 266 ~~~~~~~~~~~k~~PPLR~~~d~~~L~~~l~~G~id~i~SDHaP~~~~~k~~~~~~~~~G~~g~e~-~~pl~~~~----- 339 (425)
T PRK07627 266 DVDIGYFDSQFRLDPPLRSQRDREAIRAALADGTIDAICSDHTPVDDDEKLLPFAEATPGATGLEL-LLPLTLKW----- 339 (425)
T ss_pred HhHHhccCCceEEeCCCCCHHHHHHHHHHHhcCCCcEEEcCCCCCCHHHccCCHhhCCCCceeHHH-HHHHHHHH-----
Confidence 11234 4456788999999999977531 1111111 11111111
Q ss_pred cCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEcCCC
Q 014702 359 ANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFS 409 (420)
Q Consensus 359 ~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~ 409 (420)
....+++++++++++|.|||+++|+ ++|+|++|+.|||+|+|.+.
T Consensus 340 ----~~~~~i~~~~~l~~~t~~pA~~lg~--~~G~l~~G~~ADlvv~d~~~ 384 (425)
T PRK07627 340 ----ADEAKVPLARALARITSAPARVLGL--PAGRLAEGAPADLCVFDPDA 384 (425)
T ss_pred ----HHhCCCCHHHHHHHHHHHHHHHhCC--CCCcccCCCcCCEEEECCCC
Confidence 1124699999999999999999999 36999999999999999984
No 62
>PRK09236 dihydroorotase; Reviewed
Probab=99.97 E-value=4.7e-29 Score=236.71 Aligned_cols=121 Identities=22% Similarity=0.262 Sum_probs=83.2
Q ss_pred eeeccCCChhhHHHHHhcCCeEEECccchhhccCcccHHHHHHcCCcEEEccCCCCCC------------CCCCHHHHHH
Q 014702 279 SAHTVWVNHTEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHADICVSLGTDGAPSN------------NRMSIVDEMY 346 (420)
Q Consensus 279 ~~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~gv~~~lgsD~~~~~------------~~~~~~~~~~ 346 (420)
..|+.++++++++. .+..+.++|.... ..+..++.+++++|+.+++||||.++. .++..++.+
T Consensus 261 ~~H~l~l~~~~~~~---~~~~~~~~Pplr~-~~~~~~l~~~l~~G~i~~igtDh~p~~~~~k~~~~~~~~~G~~~~e~~- 335 (444)
T PRK09236 261 CVHHLWFDDSDYAR---LGNLIKCNPAIKT-ASDREALRQALADDRIDVIATDHAPHTWEEKQGPYFQAPSGLPLVQHA- 335 (444)
T ss_pred chhhhhcCHHHHhc---cCceEEECCCCCC-HHHHHHHHHHHhCCCCcEEECCCCCCCHHHhcCCcccCCCCcccHHHH-
Confidence 35666777766653 3666777775221 134567888999999999999998752 222222222
Q ss_pred HHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEcCCCCCCCC
Q 014702 347 LASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVP 414 (420)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~ 414 (420)
...++.... ..++|++++++++|.|||+++|+.+ +|+|++|++|||+|||++..+..+
T Consensus 336 l~~l~~~v~---------~~~~~~~~~~~~~t~~pA~~lgl~~-~G~l~~G~~ADlvi~d~~~~~~~~ 393 (444)
T PRK09236 336 LPALLELVH---------EGKLSLEKVVEKTSHAPAILFDIKE-RGFIREGYWADLVLVDLNSPWTVT 393 (444)
T ss_pred HHHHHHHHH---------hcCCCHHHHHHHHHHhHHHhcCCCC-CCccccCCcCCEEEEcCCCCEEEc
Confidence 122222111 1359999999999999999999954 699999999999999988544344
No 63
>cd01315 L-HYD_ALN L-Hydantoinases (L-HYDs) and Allantoinase (ALN); L-Hydantoinases are a member of the dihydropyrimidinase family, which catalyzes the reversible hydrolytic ring opening of dihydropyrimidines and hydantoins (five-membered cyclic diamides used in biotechnology). But L-HYDs differ by having an L-enantio specificity and by lacking activity on possible natural substrates such as dihydropyrimidines. Allantoinase catalyzes the hydrolytic cleavage of the five-member ring of allantoin (5-ureidohydantoin) to form allantoic acid.
Probab=99.97 E-value=2e-28 Score=233.94 Aligned_cols=329 Identities=18% Similarity=0.204 Sum_probs=185.7
Q ss_pred eEEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhcccCC
Q 014702 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (420)
Q Consensus 20 ~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~~~ 99 (420)
|++|+|++|++++ + ..+++|+|+||+|++|++.... ..+.++||++|++|+|||||+|+|+...
T Consensus 1 dl~i~~~~v~~~~--~--~~~~~v~I~~g~I~~i~~~~~~-----~~~~~~iDa~G~~v~PG~ID~H~H~~~~------- 64 (447)
T cd01315 1 DLVIKNGRVVTPD--G--VREADIAVKGGKIAAIGPDIAN-----TEAEEVIDAGGLVVMPGLIDTHVHINEP------- 64 (447)
T ss_pred CEEEECCEEECCC--C--ceEeEEEEECCEEEEEeCCCCC-----CCCCeEEECCCCEEeccEeeceeccCCC-------
Confidence 6899999999542 2 3568999999999999875321 1367899999999999999999998421
Q ss_pred CCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCcc-----CHHHHHHHHHHhC-CeeEeeehhccC
Q 014702 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-----HVSEMAKAVELLG-LRACLVQSTMDC 173 (420)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~-----~~~~~~~~~~~~g-~~~~~~~~~~~~ 173 (420)
.....+.+ ....+.++.+||||+++++.. ...+..+...+.. ...........
T Consensus 65 -----------------~~~~~e~~---~~~s~aal~gGvTtv~d~p~~~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~- 123 (447)
T cd01315 65 -----------------GRTEWEGF---ETGTKAAAAGGITTIIDMPLNSIPPTTTVENLEAKLEAAQGKLHVDVGFWG- 123 (447)
T ss_pred -----------------CccccccH---HHHHHHHHhCCceEEEeCCCCCCCCcCCHHHHHHHHHHhccCceeeEEEEE-
Confidence 00000111 123456789999999998621 1122222222211 11111111110
Q ss_pred CCCCCcccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeecc---ccccCHHHHHHHHHHHHHcCCccceeccCCcchh
Q 014702 174 GEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQ---IMNATDRLLLETRDMAREFKTGIHMHVAEIPYEN 250 (420)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~ 250 (420)
+... . ...+. +++...+...++++..... ....+.+.+.++++.+++.++++.+|+.......
T Consensus 124 --~~~~-----~---~~~ei----~~l~~~G~~giKv~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~vH~e~~~~~~ 189 (447)
T cd01315 124 --GLVP-----G---NLDQL----RPLDEAGVVGFKCFLCPSGVDEFPAVDDEQLEEAMKELAKTGSVLAVHAENPEITE 189 (447)
T ss_pred --eecC-----C---CHHHH----HHHHHcCCcEEEEEecccCCCCcccCCHHHHHHHHHHHHhcCCeEEEEcCCHHHHH
Confidence 0000 0 11222 2222334445555443322 2235778899999999999999999997643322
Q ss_pred HHHHhhc---------CCCCC--------hHHHHHHhccCCCccceeeccCCChhhH---HHHHhcC--CeEEECccchh
Q 014702 251 QVVMDTR---------KVDHG--------TVTFLDKIEFLQNNLLSAHTVWVNHTEI---GLLSRAG--VKVSHCPASAM 308 (420)
Q Consensus 251 ~~~~~~~---------~~~~~--------~~~~l~~~~~~~~~~~~~h~~~~~~~~~---~~~~~~~--~~~~~~p~~~~ 308 (420)
....... ..... ...++......+.+..+.|.. +...+ +.++..| +.+.+||....
T Consensus 190 ~~~~~~~~~g~~~~~~~~~~~p~~~e~~~~~~~~~la~~~g~~ihi~h~s--~~~~~~~i~~~~~~g~~i~~e~~~h~l~ 267 (447)
T cd01315 190 ALQEQAKAKGKRDYRDYLASRPVFTEVEAIQRILLLAKETGCRLHIVHLS--SAEAVPLIREARAEGVDVTVETCPHYLT 267 (447)
T ss_pred HHHHhHhhcCCCChHHhhccCCHHHHHHHHHHHHHHHHHhCCCEEEEeCC--CHHHHHHHHHHHHCCCceEEEeccccEE
Confidence 1111100 00000 011222222334344445543 23333 4444455 44556665321
Q ss_pred hc-----------cCccc---------HHHHHHcCCcEEEccCCCCCCC------CCCHHH--------HHHHHHHHhcc
Q 014702 309 RM-----------LGFAP---------IKEMLHADICVSLGTDGAPSNN------RMSIVD--------EMYLASLINKG 354 (420)
Q Consensus 309 ~~-----------~~~~~---------~~~~~~~gv~~~lgsD~~~~~~------~~~~~~--------~~~~~~~~~~~ 354 (420)
.. ...+| +.+.++.|...+++|||.|+.. ..+++. +......+...
T Consensus 268 ~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~g~i~~i~SDh~p~~~~~k~~~~~~~~~~~~g~~g~~~~~~~~~~~~ 347 (447)
T cd01315 268 FTAEDVPDGGTEFKCAPPIRDAANQEQLWEALENGDIDMVVSDHSPCTPELKLLGKGDFFKAWGGISGLQLGLPVMLTEA 347 (447)
T ss_pred EcHHHccCCCCceEECCCCCChHHHHHHHHHHhCCceeEEeCCCCCCCHHHhccCCCChhhCCCCeeEHHHhHHHHHHHH
Confidence 10 11122 3346778999999999987531 011111 00011111100
Q ss_pred cccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEcCCC
Q 014702 355 REVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFS 409 (420)
Q Consensus 355 ~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~ 409 (420)
....+++++++++++|.|||+++|+++++|+|++|++|||||+|.+.
T Consensus 348 --------~~~~~~~~~~~~~~~t~~pa~~~g~~~~~G~l~~g~~Ad~~v~d~~~ 394 (447)
T cd01315 348 --------VNKRGLSLEDIARLMCENPAKLFGLSHQKGRIAVGYDADFVVWDPEE 394 (447)
T ss_pred --------HHcCCCCHHHHHHHHhHHHHHHhCCCCCCccccCCCCCCEEEEcCCC
Confidence 01235999999999999999999998778999999999999999875
No 64
>PRK09237 dihydroorotase; Provisional
Probab=99.97 E-value=6.3e-28 Score=225.31 Aligned_cols=322 Identities=18% Similarity=0.178 Sum_probs=186.9
Q ss_pred EEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhcccCCC
Q 014702 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (420)
Q Consensus 21 ~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~~~~ 100 (420)
++|+|++|++++ .......+|+|+||+|++|++....+ ...++||++|++|+|||||+|+|+....
T Consensus 1 ~~i~~~~v~d~~--~~~~~~~~v~i~~g~I~~v~~~~~~~-----~~~~~iD~~g~~v~PG~iD~H~H~~~~~------- 66 (380)
T PRK09237 1 LLLRGGRVIDPA--NGIDGVIDIAIEDGKIAAVAGDIDGS-----QAKKVIDLSGLYVSPGWIDLHVHVYPGS------- 66 (380)
T ss_pred CEEEeEEEECCC--CCcccceEEEEECCEEEEecCCCCCC-----CCCeEEECCCCEEecCEEEeeecCCCCC-------
Confidence 479999999543 33356689999999999998854321 2568999999999999999999994310
Q ss_pred CChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCcc---CHHHHHHHHHHh-CCeeEeeehhccCCCC
Q 014702 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ---HVSEMAKAVELL-GLRACLVQSTMDCGEG 176 (420)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~---~~~~~~~~~~~~-g~~~~~~~~~~~~~~~ 176 (420)
...... ..+.++.+|+||+++++.. ......+...+. +.+......+...++.
T Consensus 67 --------------~~~~~~---------~~~~~~~~G~Ttv~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~ 123 (380)
T PRK09237 67 --------------TPYGDE---------PDEVGVRSGVTTVVDAGSAGADNFDDFRKLTIEASKTRVLAFLNISRIGLL 123 (380)
T ss_pred --------------CccCCC---------HHHHHHhCCcCEEEECCCCCCCCHHHHHHHHHhhhCcEEEEEEeeeccccc
Confidence 000000 1245789999999997642 233444444433 4443221111111111
Q ss_pred CCcccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeecc--ccccCHHHHHHHHHHHHHcCCccceeccCCcchhHHHH
Q 014702 177 LPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQ--IMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVM 254 (420)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~ 254 (420)
.+. +.........+...+++.++.. +.+++...... ......+..+....++++.++++.+|+.+.....+...
T Consensus 124 ~~~-~~~~~~~~~~~~~~~~~~~~~~---~v~glk~~~~~~v~~~~~~~~~~~~~~~a~~~g~~v~~H~~~~~~~~~~l~ 199 (380)
T PRK09237 124 AQD-ELADLEDIDADAVAEAVKRNPD---FIVGIKARMSSSVVGDNGIEPLELAKAIAAEANLPLMVHIGNPPPSLEEIL 199 (380)
T ss_pred ccc-hhcCHhHCCHHHHHHHHHhCcC---cEEEEEEEEecccccccCCchHHHHHHHHHhcCCCEEEEcCCCCCCHHHHH
Confidence 111 1111111122333444433222 23332222211 11111133444555667899999999976543322221
Q ss_pred hhcCCCCChHHHHHHhccCCCccceeeccCCCh-----------hhHHHHHhcCCeEEECccchhhccCcccHHHHHHcC
Q 014702 255 DTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH-----------TEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHAD 323 (420)
Q Consensus 255 ~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~-----------~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g 323 (420)
. ++....++.|+...++ +......++|..+.+...+. ...+....++.++|
T Consensus 200 ~----------------~l~~g~~~~H~~~~~~~~~~~~~~~~~~~a~~~l~~G~~~~ig~g~~--~~~~~~~~~l~~~g 261 (380)
T PRK09237 200 E----------------LLRPGDILTHCFNGKPNRILDEDGELRPSVLEALERGVRLDVGHGTA--SFSFKVAEAAIAAG 261 (380)
T ss_pred h----------------hccCCCEEEecCCCCCCCccCCCCcchHHHHHHHHCCEEEEecCCCC--cccHHHHHHHHHCC
Confidence 1 1122235688887665 46666777888877542211 01224456777888
Q ss_pred C-cEEEccCCCCCC-CC---CCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCc
Q 014702 324 I-CVSLGTDGAPSN-NR---MSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGK 398 (420)
Q Consensus 324 v-~~~lgsD~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~ 398 (420)
+ ..+++||..+.. .. ..+...+..+. ..+++++++++++|.|||+++|+ +++|+|++|+
T Consensus 262 ~~~~~l~tD~~~~~~~~~~~~~l~~~~~~~~---------------~~g~~~~~al~~aT~n~A~~lgl-~~~G~l~~G~ 325 (380)
T PRK09237 262 ILPDTISTDIYCRNRINGPVYSLATVMSKFL---------------ALGMPLEEVIAAVTKNAADALRL-PELGRLQVGS 325 (380)
T ss_pred CCceEEECCCCCCCcccchHhHHHHHHHHHH---------------HhCCCHHHHHHHHHHHHHHHcCC-CCCCcCCCCC
Confidence 5 568999976532 11 11222222211 12599999999999999999999 4579999999
Q ss_pred cccEEEEcCCCCCCCCCCCC
Q 014702 399 KADMVVVDPFSWPMVPVHDR 418 (420)
Q Consensus 399 ~ADlvv~d~~~~~~~~~~~~ 418 (420)
.|||++++.+... .++.|+
T Consensus 326 ~ADlvv~~~~~~~-~~~~d~ 344 (380)
T PRK09237 326 DADLTLFTLKDGP-FTLTDS 344 (380)
T ss_pred cCCEEEEeCCCCC-ccccCC
Confidence 9999999976544 344443
No 65
>TIGR02318 phosphono_phnM phosphonate metabolism protein PhnM. This family consists of proteins from in the PhnM family. PhnM is a a protein associated with phosphonate utilization in a number of bacterial species. In Pseudomonas stutzeri WM88, a protein that is part of a system for the oxidation of phosphites (another form of reduced phosphorous compound) scores between trusted and noise cutoffs.
Probab=99.97 E-value=1.2e-28 Score=227.35 Aligned_cols=305 Identities=20% Similarity=0.252 Sum_probs=177.0
Q ss_pred EEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhcccCCCC
Q 014702 22 ILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDV 101 (420)
Q Consensus 22 li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~~~~~ 101 (420)
+|+|++|++.++ +. .++|.|+||||++|++... ...++||++|++|+|||||+|+|.....+.
T Consensus 1 ~i~~~~vv~~~~---~~-~~~i~i~dg~I~~i~~~~~-------~~~~~iD~~G~~v~PGlID~H~h~~e~~~~------ 63 (376)
T TIGR02318 1 VLSNARLVLEDE---VV-EGSVVIEDGAIADIGEGPV-------ALAEAIDGEGDLLLPGLIDLHTDNLERHMS------ 63 (376)
T ss_pred CEeCeEEECCCc---eE-eeeEEEECCEEEEecCCCC-------CCCceEeCCCCEEeccEEEcccCccccCcC------
Confidence 489999996443 33 3599999999999987422 256789999999999999999998431110
Q ss_pred ChHHHhhhccccccC-CCChHHHHHHHHHHHHHHHhCCcceeeeCCc--------cCHH---HHH---HHHHHhC-C--e
Q 014702 102 DLMTWLHDRIWPYES-NMTEEDSYISTLLCGIELIHSGVTCFAEAGG--------QHVS---EMA---KAVELLG-L--R 163 (420)
Q Consensus 102 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~--------~~~~---~~~---~~~~~~g-~--~ 163 (420)
|... .++.. .......++++.+||||++++.. .... ... ..++..+ . .
T Consensus 64 -----------prp~~~~~~~---~~~~~~~~~~aa~GiTT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 129 (376)
T TIGR02318 64 -----------PRPGVDWPID---AAIVEHDKQLAAAGITTVFDALALGDTESGGRRPDNLRRMIDAISEARDRGLLRAD 129 (376)
T ss_pred -----------CCCCCCcchH---HHHHHHHHHHhhCCcceEEeeEEecccCCcCccHHHHHHHHHHHHHhhhcCchhhh
Confidence 0000 11111 22223456788999999998741 1111 122 1111110 0 0
Q ss_pred --eEeeeh------------hccCCC-C-------CCcccccCChhHHHH-----------HHHHHHHHhcCCCCCceEE
Q 014702 164 --ACLVQS------------TMDCGE-G-------LPASWAVRTTDDCIQ-----------SQKELYAKHHHAADGRIRI 210 (420)
Q Consensus 164 --~~~~~~------------~~~~~~-~-------~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~i~~ 210 (420)
...... ....+. + .+..+.......+.. +..+.+.+.....
T Consensus 130 ~~~h~~~e~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~e~~~~~~~~~~~~------ 203 (376)
T TIGR02318 130 HRLHLRCELPNEEVLPELEELIDDPRVDLISLMDHTPGQRQFRDLEKYREYYRGKRGLSDDEFDEIVEERIARR------ 203 (376)
T ss_pred ceeEEEEEecCccHHHHHHHHhcCCCcCEEEEeCCCCCcccccCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHH------
Confidence 001110 000000 0 000000000000000 1111111100000
Q ss_pred EEeeccccccCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCCChhhH
Q 014702 211 WFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEI 290 (420)
Q Consensus 211 ~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~~ 290 (420)
.....+.+..++++|++.|+++..|..+.........+ .+. ....| .++.+..
T Consensus 204 -------~~~~~e~i~~~v~~A~~~G~~v~sH~~~~~e~i~~a~~--------------~Gv----~~~E~--~~t~e~a 256 (376)
T TIGR02318 204 -------AEYGLANRSEIAALARARGIPLASHDDDTPEHVAEAHD--------------LGV----TISEF--PTTLEAA 256 (376)
T ss_pred -------hhccHHHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHH--------------CCC----Chhcc--CCCHHHH
Confidence 01236788889999999999999999765432222211 111 11233 3678888
Q ss_pred HHHHhcCCeEEECccchhhc---cCcccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCC
Q 014702 291 GLLSRAGVKVSHCPASAMRM---LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAA 367 (420)
Q Consensus 291 ~~~~~~~~~~~~~p~~~~~~---~~~~~~~~~~~~gv~~~lgsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (420)
+.+++.|+.+..+.....+. .+..++.++++.|+.++++||+.+. .++..+..... ...+
T Consensus 257 ~~~~~~G~~v~~~~p~~~r~~~~~~~~~l~~~~~~G~~~~l~SD~~p~----~~l~~~~~~~~-------------~~~g 319 (376)
T TIGR02318 257 KEARSLGMQILMGAPNIVRGGSHSGNLSARELAHEGLLDVLASDYVPA----SLLLAAFQLAD-------------DVEG 319 (376)
T ss_pred HHHHHcCCeEEECCccccccccccchHHHHHHHHCCCcEEEEcCCCcH----HHHHHHHHHHH-------------hhcC
Confidence 99999999977663221121 2356788899999999999999653 22222211111 0135
Q ss_pred CCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEcCC
Q 014702 368 LPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPF 408 (420)
Q Consensus 368 ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~ 408 (420)
++++++++++|.|||+++|+++ +|+|++|++|||+++|.+
T Consensus 320 l~~~~al~~~T~npA~~lgl~~-~G~I~~G~~ADlvvvd~~ 359 (376)
T TIGR02318 320 IPLPQAVKMVTKNPARAVGLSD-RGSIAPGKRADLVRVHRV 359 (376)
T ss_pred CCHHHHHHHHhHHHHHHcCCCC-CCcCCCCCcccEEEEcCC
Confidence 8999999999999999999974 699999999999999985
No 66
>PRK13308 ureC urease subunit alpha; Reviewed
Probab=99.97 E-value=3.8e-28 Score=226.00 Aligned_cols=318 Identities=19% Similarity=0.209 Sum_probs=176.3
Q ss_pred CCceEEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhh--h-----hhccCCCcEEeCCCcEEeeccccccccc
Q 014702 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADIL--Q-----QFSQMADQIIDLQSQILLPGFVNTHVHT 89 (420)
Q Consensus 17 ~~~~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~--~-----~~~~~~~~~iD~~g~~v~PGfID~H~H~ 89 (420)
+..|++|+|++|+ |+... +..++|.|+||+|++|++..+.. . -..+.++++||++|++|+|||||+|+|+
T Consensus 66 ~~~DlVItNa~II--Dp~~G-i~kaDIgIkDGrIaaIG~~~npd~~~gv~p~~~~g~~teVIDaeG~IVtPG~ID~HVH~ 142 (569)
T PRK13308 66 GALDFVLCNVTVI--DPVLG-IVKGDIGIRDGRIVGIGKAGNPDIMDGVDPRLVVGPGTDVRPAEGLIATPGAIDVHVHF 142 (569)
T ss_pred CcCCEEEECeEEE--cCCCC-eEEeEEEEECCEEEEecCCCCccccccccccccCCCCCeEEECCCCEEEeCEEEeeeCC
Confidence 4679999999999 43223 45789999999999999753210 0 0012367899999999999999999998
Q ss_pred chhhhcccCCCCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCcc--------C---HHHHHHHHH
Q 014702 90 SQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--------H---VSEMAKAVE 158 (420)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~--------~---~~~~~~~~~ 158 (420)
.. +. ..+.++.+||||+++++.. . .....+...
T Consensus 143 ~~---------------------------Pg---------~~~aALagGVTTVi~gg~gPt~p~~t~g~~~i~~~l~aa~ 186 (569)
T PRK13308 143 DS---------------------------AQ---------LVDHALASGITTMLGGGLGPTVGIDSGGPFNTGRMLQAAE 186 (569)
T ss_pred CC---------------------------cc---------HHHHHHcCCCcEEecCCcCCCCCCCCCCHHHHHHHHHHHh
Confidence 21 11 1156789999999985311 1 222233333
Q ss_pred HhCCeeEeeehhccCCCCCCcccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHcCCc
Q 014702 159 LLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTG 238 (420)
Q Consensus 159 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~ 238 (420)
...++.. +... +.. . ...+. .++...+...++ .+..+..+++.+.++++.+++++++
T Consensus 187 ~~pvN~g----~~gk--G~~------s---~~aeL----~eli~aGA~GfK----i~ed~g~t~~~i~~aL~~A~~~dv~ 243 (569)
T PRK13308 187 AWPVNFG----FLGR--GNS------S---KPAAL----IEQVEAGACGLK----IHEDWGAMPAAIDTCLEVADEYDFQ 243 (569)
T ss_pred cCCccEE----EEcC--Ccc------c---CHHHH----HHHHHCCCCEEe----ecCCCCCCHHHHHHHHHHHHhcCCE
Confidence 2222221 1101 111 0 11222 222223322233 2233356888999999999999999
Q ss_pred cceeccCCcchhHHHHhhcCCCCChHHH-HHHhccCCCccceeeccCCC----hhhHHHHHhcC----------------
Q 014702 239 IHMHVAEIPYENQVVMDTRKVDHGTVTF-LDKIEFLQNNLLSAHTVWVN----HTEIGLLSRAG---------------- 297 (420)
Q Consensus 239 v~~h~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~h~~~~~----~~~~~~~~~~~---------------- 297 (420)
+.+|+....... ..+. +.++. +..+...|..... ++-++.+...+
T Consensus 244 VaiHadtlne~g------------~~E~t~~a~~--gr~iH~~H~egaggghapd~l~~~~~~n~lp~stnpt~p~t~nt 309 (569)
T PRK13308 244 VQLHTDTLNESG------------FVEDTLAAIG--GRTIHMYHTEGAGGGHAPDIIRVVGEPHCLPSSTNPTNPYTVNT 309 (569)
T ss_pred EEEeCCCcCcch------------HHHHHHHHhc--CCeEEEEeccCCccCchhHHHHHhCCCCccCCCCCCCCCCccCc
Confidence 999997743211 1110 11110 1111112211111 11111111111
Q ss_pred -----CeEEECccch-------------hhccCcccHHHHHHcCCcEEEccCCCCCCCCCCHHHHH----HHHHHHhccc
Q 014702 298 -----VKVSHCPASA-------------MRMLGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEM----YLASLINKGR 355 (420)
Q Consensus 298 -----~~~~~~p~~~-------------~~~~~~~~~~~~~~~gv~~~lgsD~~~~~~~~~~~~~~----~~~~~~~~~~ 355 (420)
-.+.+|...+ .|...+..-.-|.+.|+..+++||....+. +.+.+ +.+..+.+.+
T Consensus 310 ~~e~~dm~m~~h~l~~~~~~d~afa~srir~~ti~ae~~l~d~g~~s~~~sds~~mgr---~~e~i~r~~q~a~~~~~~~ 386 (569)
T PRK13308 310 FDEHLDMTMVCHHLNPDVPEDVAFAESRIRAQTIAAEDVLHDIGAISMLGSDSQGMGR---IAEVIARTWQLASKMKDQR 386 (569)
T ss_pred hhhhcCeEEEecCCCCCCcchhhhhhhhccceeeccCchhhcCCcEEEEecchHHHhH---HHHHHHHHHHHHHHHhhcC
Confidence 1122221111 111222333457788999999999875432 23333 3333332222
Q ss_pred ccccCCC-CCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEcCCCCCCC
Q 014702 356 EVFANGT-TDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMV 413 (420)
Q Consensus 356 ~~~~~~~-~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~ 413 (420)
..+.... ......-+..+++++|.|||+++|+++++|+|++||.||||||+++.|...
T Consensus 387 g~l~~~~~~~~dn~rv~r~L~~~T~npA~alGi~~~vGsLe~Gk~ADLVv~d~d~fgv~ 445 (569)
T PRK13308 387 GPLPEDRGTFADNARIKRYIAKYTINPAITFGIDDHIGSLEPGKLADIVLWRPAFFGIK 445 (569)
T ss_pred CCCCcccccCCchhhhhHHHHHHhHHHHHHcCCCCCceeeCCCCcCCEEEECCcccCCC
Confidence 2221110 001122334469999999999999998899999999999999999987643
No 67
>PLN02303 urease
Probab=99.97 E-value=5.8e-28 Score=231.94 Aligned_cols=328 Identities=17% Similarity=0.178 Sum_probs=192.0
Q ss_pred CceEEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhh--hh-----hhccCCCcEEeCCCcEEeecccccccccc
Q 014702 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADI--LQ-----QFSQMADQIIDLQSQILLPGFVNTHVHTS 90 (420)
Q Consensus 18 ~~~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~--~~-----~~~~~~~~~iD~~g~~v~PGfID~H~H~~ 90 (420)
..|++|+|++|++ ..+ +..++|+|+||+|++|++.... +. ...+.++++||++|++|+|||||+|+|+.
T Consensus 333 ~~DlVItNa~IID--~~G--i~kaDI~IkDGrIvaIGkagnp~i~~gv~~~~~~g~~teVIDAeGlIVtPG~ID~HVHf~ 408 (837)
T PLN02303 333 SLDTVITNAVIID--YTG--IYKADIGIKDGLIVGIGKAGNPDVMDGVTSNMIVGVNTEVIAGEGMIVTAGGIDCHVHFI 408 (837)
T ss_pred cCCEEEeCeEEEC--CCC--cEEeEEEEECCEEEEecCCCCcccccccccccccCCCCeEEECCCCEEEeCEEEeecCCC
Confidence 5689999999995 323 4667999999999999975321 11 01123579999999999999999999982
Q ss_pred hhhhcccCCCCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCcc------------CHH---HHHH
Q 014702 91 QQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ------------HVS---EMAK 155 (420)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~------------~~~---~~~~ 155 (420)
. +.. .++.+..|+||++..|.. ... ...+
T Consensus 409 ~------------------------Pg~------------~~eaLasGVTTai~GGtgp~pnT~ptt~t~g~e~I~~~L~ 452 (837)
T PLN02303 409 C------------------------PQL------------ATEAIASGITTLVGGGTGPAHGTCATTCTPAPSHMKLMLQ 452 (837)
T ss_pred C------------------------CcH------------HHHHHHHhHHHHHhcCCCCCCcccCcCCCCCHHHHHHHHH
Confidence 1 111 023455666665554321 111 1222
Q ss_pred HHHHhCCeeEeeehhccCCCCCCcccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHc
Q 014702 156 AVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREF 235 (420)
Q Consensus 156 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~ 235 (420)
......++..+. +.+.. ....+..+. ... +.+. +..+..+..+++.+.++++.++++
T Consensus 453 aa~~~pvn~Gf~------gkG~~---------s~l~eL~el----iea--Ga~G--fK~h~d~gvTpelL~raLe~Akel 509 (837)
T PLN02303 453 STDDLPLNFGFT------GKGNT---------AKPEGLHEI----IKA--GAMG--LKLHEDWGTTPAAIDNCLDVAEEY 509 (837)
T ss_pred hcccCCCcEEEE------ccCcc---------cCHHHHHHH----HHc--CcEE--EEECCCCCCCHHHHHHHHHHHHHc
Confidence 222222222111 01110 112222222 222 2332 334444567899999999999999
Q ss_pred CCccceeccCCcch---hHHHHhhcCCCCChHHHHHHhccCCCcc-----ceeecc------CCC-hhhHHHHHhcCCeE
Q 014702 236 KTGIHMHVAEIPYE---NQVVMDTRKVDHGTVTFLDKIEFLQNNL-----LSAHTV------WVN-HTEIGLLSRAGVKV 300 (420)
Q Consensus 236 ~~~v~~h~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~~h~~------~~~-~~~~~~~~~~~~~~ 300 (420)
++++++|+ ++..+ .+...+.+ +.+++.+++..+..+.+- ++.+.. ..+ |-.++-+.++--.+
T Consensus 510 GVpVaIHA-EdLnE~G~vE~t~~a~--G~RpIh~~h~~Ga~gghapdi~~~~~~~nvlpsstnpt~p~t~nt~~e~~dm~ 586 (837)
T PLN02303 510 DIQVTIHT-DTLNESGCVEHSIAAF--KGRTIHTYHSEGAGGGHAPDIIKVCGVKNVLPSSTNPTRPYTKNTIDEHLDML 586 (837)
T ss_pred CCEEEEec-CcccccchHHHHHHHH--CCChHHHHHhcCCCCCCCcHHHHhcCCCCccCCCCCCCCCCccCchhhhcCeE
Confidence 99999995 44433 33344433 345777777777666421 111111 110 11122222222233
Q ss_pred EECccch-------------hhccCcccHHHHHHcCCcEEEccCCCCCCCCCCH-HHHHHHHHHHhcccccccCCCCCCC
Q 014702 301 SHCPASA-------------MRMLGFAPIKEMLHADICVSLGTDGAPSNNRMSI-VDEMYLASLINKGREVFANGTTDPA 366 (420)
Q Consensus 301 ~~~p~~~-------------~~~~~~~~~~~~~~~gv~~~lgsD~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (420)
++|...+ .|...+..-.-|.+.|+..+++||....+.-... .+.++.+..+...+..+........
T Consensus 587 m~~h~l~~~~~edvafa~srir~~tiaaed~l~d~G~~s~~~SDs~amgr~ge~i~r~~q~A~k~~~~~g~l~~~~~~~d 666 (837)
T PLN02303 587 MVCHHLDKNIPEDVAFAESRIRAETIAAEDILHDMGAISIISSDSQAMGRIGEVITRTWQTAHKMKSQRGALEPRGADND 666 (837)
T ss_pred EeecCCCCCCcchhhhhhhhccchhhccchhhhccCCEEEEeccchhhCcccceeeehHHHHHHHHHhcCCCCCcccccc
Confidence 4443322 1222233344577899999999998754322122 1233344433333333332222346
Q ss_pred CCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEcCCCCC
Q 014702 367 ALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWP 411 (420)
Q Consensus 367 ~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~ 411 (420)
..+.+++|++.|.|||+++|+++++|+|++||.||||||++++|.
T Consensus 667 n~rv~~aL~~~TiN~A~AlG~~~~vGSLe~GK~ADlVvw~~~~fg 711 (837)
T PLN02303 667 NFRIKRYIAKYTINPAIAHGMSHFVGSVEVGKLADLVLWKPAFFG 711 (837)
T ss_pred ccCHHHHHHHHhHHHHHHCCcccCceeeCCCcccCEEEecccccC
Confidence 789999999999999999999999999999999999999998887
No 68
>PRK02382 dihydroorotase; Provisional
Probab=99.96 E-value=1.2e-27 Score=227.06 Aligned_cols=327 Identities=18% Similarity=0.225 Sum_probs=190.8
Q ss_pred CceEEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhccc
Q 014702 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (420)
Q Consensus 18 ~~~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~ 97 (420)
|.|++|+|++|++. .. +..++|+|+||+|++|++.... + ...++||++|++|+|||||+|+|+...
T Consensus 1 ~~dl~i~n~~v~~~---~~-~~~~~v~I~dg~I~~i~~~~~~----~-~~~~~id~~g~~v~PG~ID~H~H~~~~----- 66 (443)
T PRK02382 1 MRDALLKDGRVYYN---NS-LQPRDVRIDGGKITAVGKDLDG----S-SSEEVIDARGMLLLPGGIDVHVHFREP----- 66 (443)
T ss_pred CceEEEECCEEEeC---CC-ceEEEEEEECCEEEEecCCCCC----C-CCCeEEECCCCEEcCCEeeeeeeccCC-----
Confidence 47899999999962 22 3568999999999999864321 1 246899999999999999999998321
Q ss_pred CCCCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCccC----HH-HHHHHHHHhCCeeEeeehhcc
Q 014702 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH----VS-EMAKAVELLGLRACLVQSTMD 172 (420)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~~----~~-~~~~~~~~~g~~~~~~~~~~~ 172 (420)
.....+.+. ...+.++.+|||++++++... .. ..........-+........
T Consensus 67 -------------------g~~~~e~~~---~~~~aa~~gGvTtv~~~~~t~p~~~~~~~~~~~~~~a~~~s~v~~~~~- 123 (443)
T PRK02382 67 -------------------GYTHKETWY---TGSRSAAAGGVTTVVDQPNTDPPTVDGESFDEKAELAARKSIVDFGIN- 123 (443)
T ss_pred -------------------CCCchhhHH---HHHHHHHhCCcEEEEECCCCCCCCChHHHHHHHHHHhCcCceEEEEEE-
Confidence 111111121 234678899999999986421 11 12222222222222221111
Q ss_pred CCCCCCcccccCChhHHHHHHHHHHHHhcCCCCCce-EEEEee-ccccccCHHHHHHHHHHHHHcCCccceeccCCcchh
Q 014702 173 CGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRI-RIWFGI-RQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYEN 250 (420)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~-~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~ 250 (420)
.+ . . ....+...+.+ .+...+ +++... ......+++.+.++++.+++.+.++.+|+.......
T Consensus 124 ~~--~-~--------~~~~~l~~l~~----~gv~~~gkv~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~ 188 (443)
T PRK02382 124 GG--V-T--------GNWDPLESLWE----RGVFALGEIFMADSTGGMGIDEELFEEALAEAARLGVLATVHAEDEDLFD 188 (443)
T ss_pred ee--e-c--------cchhhHHHHHh----cCccceeEEEEEecCCCcccCHHHHHHHHHHHHhcCCeEEEecCCHHHHH
Confidence 00 0 0 01112222222 122222 333321 122345677899999999999999999997654322
Q ss_pred HHHHhhcC-------CCCChH--------HHHHHhccCCCccceeeccCCC-hhhHHHHHhcCCeEEECccchhh-----
Q 014702 251 QVVMDTRK-------VDHGTV--------TFLDKIEFLQNNLLSAHTVWVN-HTEIGLLSRAGVKVSHCPASAMR----- 309 (420)
Q Consensus 251 ~~~~~~~~-------~~~~~~--------~~l~~~~~~~~~~~~~h~~~~~-~~~~~~~~~~~~~~~~~p~~~~~----- 309 (420)
.......+ ....+. ..+......+ +..|..|++ .+.++.+++..+++.+||.+...
T Consensus 189 ~~~~~~~g~~~~~~~~~~~p~~~E~~av~~~~~la~~~g---~~~hi~h~ss~~~~~~i~~~~vt~ev~ph~L~l~~~~~ 265 (443)
T PRK02382 189 ELAKLLKGDADADAWSAYRPAAAEAAAVERALEVASETG---ARIHIAHISTPEGVDAARREGITCEVTPHHLFLSRRDW 265 (443)
T ss_pred HhhHhhcCCCCHhhCCCcCCHHHHHHHHHHHHHHHHHhC---CCEEEEECCCHHHHHHHHHCCcEEEEchhhhhcCHHHH
Confidence 11111100 000010 1122222233 334555554 46677777777888899984311
Q ss_pred ------ccCcccHH---------HHHHcCCcEEEccCCCCCCC------------CCCHHHHHHHHHHHhcccccccCCC
Q 014702 310 ------MLGFAPIK---------EMLHADICVSLGTDGAPSNN------------RMSIVDEMYLASLINKGREVFANGT 362 (420)
Q Consensus 310 ------~~~~~~~~---------~~~~~gv~~~lgsD~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (420)
..-.+|++ +.+++|...+++|||.|+.. ++.-.+.+.. .++..
T Consensus 266 ~~~~~~~k~~PPlr~~~d~~aL~~~l~~g~i~~i~sDh~P~~~~~K~~~~~~~~~G~~g~e~~~~-~~~~~--------- 335 (443)
T PRK02382 266 ERLGTFGKMNPPLRSEKRREALWERLNDGTIDVVASDHAPHTREEKDADIWDAPSGVPGVETMLP-LLLAA--------- 335 (443)
T ss_pred hccCceEEEcCCCCChHHHHHHHHHHhCCCCCEEEcCCCCCCHHHhcCChhhCCCCcccHHHHHH-HHHHH---------
Confidence 01124444 34667999999999998631 1111111111 11111
Q ss_pred CCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEcCCCC
Q 014702 363 TDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSW 410 (420)
Q Consensus 363 ~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~ 410 (420)
....+++++++++++|.|||+++|+. ++|+|++|++|||+|||++..
T Consensus 336 ~~~~~~~l~~~~~~~t~~pA~~~g~~-~~G~l~~G~~AD~vi~d~~~~ 382 (443)
T PRK02382 336 VRKNRLPLERVRDVTAANPARIFGLD-GKGRIAEGYDADLVLVDPDAA 382 (443)
T ss_pred HHcCCCCHHHHHHHHhHHHHHHcCCC-CCCccCCCCcCCEEEEcCCCc
Confidence 01235999999999999999999996 579999999999999998754
No 69
>PRK07369 dihydroorotase; Provisional
Probab=99.96 E-value=8.6e-28 Score=224.64 Aligned_cols=328 Identities=16% Similarity=0.161 Sum_probs=184.8
Q ss_pred CceEEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhccc
Q 014702 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (420)
Q Consensus 18 ~~~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~ 97 (420)
|.+++|+|++|+ |+.+.....++|+|+||+|++|++.... +..+.++||++|++|+|||||+|+|+...
T Consensus 1 ~~~~~i~n~~v~--d~~~~~~~~~~v~I~dg~I~~i~~~~~~----~~~~~~~iDa~G~~vlPG~ID~H~H~~~~----- 69 (418)
T PRK07369 1 MSNELLQQVRVL--DPVSNTDRIADVLIEDGKIQAIEPHIDP----IPPDTQIIDASGLILGPGLVDLYSHSGEP----- 69 (418)
T ss_pred CCCEEEeCeEEE--CCCCCcccceeEEEECCEEEEecCCccc----CCCCCEEEECCCCEEecCEEecccccCCC-----
Confidence 468999999999 4433334678999999999999875321 01357899999999999999999998321
Q ss_pred CCCCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCccC----HHHHHHHHHH----h-CCeeEeee
Q 014702 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH----VSEMAKAVEL----L-GLRACLVQ 168 (420)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~~----~~~~~~~~~~----~-g~~~~~~~ 168 (420)
.....+.+. ...+.++.+|||++.++++.. ..+..+...+ . .+...+..
T Consensus 70 -------------------~~~~~e~~~---s~~~aa~~GGvTtv~~~pn~~P~~~~~~~~~~~~~~~~~~~~vd~~~~~ 127 (418)
T PRK07369 70 -------------------GFEERETLA---SLAAAAAAGGFTRVAILPDTFPPLDNPATLARLQQQAQQIPPVQLHFWG 127 (418)
T ss_pred -------------------CcCCCccHH---HHHHHHHhCCceEEEECCCCCCCCCCHHHHHHHHHHhcccCceeEEEEE
Confidence 111111111 244678899999999987431 1222221111 1 11111111
Q ss_pred hhccCCCCCCcccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHcCCccceeccCCcc
Q 014702 169 STMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPY 248 (420)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~ 248 (420)
.+ ..+ .......+..++. .. +.... . ......+...+.++++.+++.+..+.+|+.+...
T Consensus 128 ~~-~~~----------~~~~~~~ei~~l~----~~--Gv~~f-~--~~~~~~~~~~l~~~~~~~~~~~~~v~~H~Ed~~l 187 (418)
T PRK07369 128 AL-TLG----------GQGKQLTELAELA----AA--GVVGF-T--DGQPLENLALLRRLLEYLKPLGKPVALWPCDRSL 187 (418)
T ss_pred EE-eeC----------CCCccHhhHHHHH----HC--CCEEE-E--CCCcCCCHHHHHHHHHHHHhcCCeEEEecCChhh
Confidence 11 100 0001112222221 11 22221 1 1222345667878888899999999999976543
Q ss_pred hhHHHH------hhcCCCCCh-----H---HHHHHhccCCCccceeeccCCChhhH---HHHHhcC--CeEEECccchhh
Q 014702 249 ENQVVM------DTRKVDHGT-----V---TFLDKIEFLQNNLLSAHTVWVNHTEI---GLLSRAG--VKVSHCPASAMR 309 (420)
Q Consensus 249 ~~~~~~------~~~~~~~~~-----~---~~l~~~~~~~~~~~~~h~~~~~~~~~---~~~~~~~--~~~~~~p~~~~~ 309 (420)
...... ...+....+ . ..+......+.+..+.|.. +.+.+ +..++.| +++.+||.+...
T Consensus 188 ~~~~~~~~g~~~~~~~~~~~p~~aE~~av~r~~~la~~~~~~~hi~HvS--s~~~~~~i~~ak~~g~~vt~Ev~phhL~l 265 (418)
T PRK07369 188 AGNGVMREGLLALRLGLPGDPASAETTALAALLELVAAIGTPVHLMRIS--TARSVELIAQAKARGLPITASTTWMHLLL 265 (418)
T ss_pred hhcCcccCChhHHHhCCCCCCHHHHHHHHHHHHHHHHHHCCcEEEEeCC--CHHHHHHHHHHHHcCCCeEEEecHHHHhc
Confidence 211000 000011101 0 1222222334444444443 23434 4445555 567788876421
Q ss_pred c-----------cCcccHH---------HHHHcCCcEEEccCCCCCCCCC---CHH--------HHHHHHHHHhcccccc
Q 014702 310 M-----------LGFAPIK---------EMLHADICVSLGTDGAPSNNRM---SIV--------DEMYLASLINKGREVF 358 (420)
Q Consensus 310 ~-----------~~~~~~~---------~~~~~gv~~~lgsD~~~~~~~~---~~~--------~~~~~~~~~~~~~~~~ 358 (420)
. .-.+|++ +.+++|...+++|||.|+...- +++ -+......+...
T Consensus 266 ~~~~~~~~~~~~kv~PPLR~~~d~~aL~~~l~~G~Id~i~SDHaP~~~~~K~~~~~~~~~G~~G~e~~l~~~~~~~---- 341 (418)
T PRK07369 266 DTEALASYDPNLRLDPPLGNPSDRQALIEGVRTGVIDAIAIDHAPYTYEEKTVAFAEAPPGAIGLELALPLLWQNL---- 341 (418)
T ss_pred cHHHHhccCCCcEECCCCCCHHHHHHHHHHHhcCCCCEEEcCCCCCCHHHccCCHhHCCCCceeHHHHHHHHHHHH----
Confidence 1 1124444 4567899999999999874110 111 011111111110
Q ss_pred cCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEcCCCC
Q 014702 359 ANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSW 410 (420)
Q Consensus 359 ~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~ 410 (420)
....+++++++++++|.|||+++|+. .|+|++|++|||+++|++.-
T Consensus 342 ----v~~~~i~l~~~v~~~s~nPA~~lgl~--~G~i~~G~~ADlvi~d~~~~ 387 (418)
T PRK07369 342 ----VETGELSALQLWQALSTNPARCLGQE--PPSLAPGQPAELILFDPQKT 387 (418)
T ss_pred ----HHcCCCCHHHHHHHHHHhHHHHhCCC--cCcccCCCcCCEEEEcCCCC
Confidence 01235999999999999999999995 49999999999999998843
No 70
>cd00375 Urease_alpha Urease alpha-subunit; Urease is a nickel-dependent metalloenzyme that catalyzes the hydrolysis of urea to form ammonia and carbon dioxide. Nickel-dependent ureases are found in bacteria, fungi and plants. Their primary role is to allow the use of external and internally generated urea as a nitrogen source. The enzyme consists of 3 subunits, alpha, beta and gamma, which can be fused and present on a single protein chain and which in turn forms multimers, mainly trimers. The large alpha subunit is the catalytic domain containing an active site with a bi-nickel center complexed by a carbamylated lysine. The beta and gamma subunits play a role in subunit association to form the higher order trimers.
Probab=99.96 E-value=1.2e-27 Score=222.57 Aligned_cols=329 Identities=16% Similarity=0.196 Sum_probs=178.0
Q ss_pred CCceEEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhh-------hhhccCCCcEEeCCCcEEeeccccccccc
Q 014702 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADIL-------QQFSQMADQIIDLQSQILLPGFVNTHVHT 89 (420)
Q Consensus 17 ~~~~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~-------~~~~~~~~~~iD~~g~~v~PGfID~H~H~ 89 (420)
+..|++|+|++|++ ..+ +..++|.|+||+|++|++..... ....+.++++||++|++|+|||||+|+|+
T Consensus 63 ~~~DlVI~Na~IiD--~~g--i~~adI~IkdGrIvaIG~agnp~~~~~v~~~~~~g~~teVIDaeG~iV~PG~ID~HvH~ 138 (567)
T cd00375 63 DVLDLVITNALIID--YTG--IYKADIGIKDGRIVAIGKAGNPDIMDGVTPNMIVGPSTEVIAGEGKIVTAGGIDTHVHF 138 (567)
T ss_pred ccCCEEEECeEEEC--CCC--cEEEEEEEECCEEEEEecCCCccccccccccccCCCCCeEEECCCCEEeeceEECccCC
Confidence 45789999999995 322 35689999999999999853210 01122357899999999999999999998
Q ss_pred chhhhcccCCCCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCccC---------------HHHHH
Q 014702 90 SQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH---------------VSEMA 154 (420)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~~---------------~~~~~ 154 (420)
.. +. ....++.+||||++++|... ...+.
T Consensus 139 ~~------------------------P~------------~~~aAlagGVTTvI~~G~gP~~gtnatp~t~g~~~l~~ml 182 (567)
T cd00375 139 IC------------------------PQ------------QIEEALASGITTMIGGGTGPAAGTKATTCTPGPWNIKRML 182 (567)
T ss_pred CC------------------------cc------------HHHHHHcCCCcEEEcCCcCcccccCCCCCCCCHHHHHHHH
Confidence 21 10 02467899999999963111 12233
Q ss_pred HHHHHhCCeeEeeehhccCCCCCCcccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHH
Q 014702 155 KAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMARE 234 (420)
Q Consensus 155 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~ 234 (420)
+......+...+.. . +. .....+..+ +... +.+. +..+..+..++..+.++++.+.+
T Consensus 183 ~aa~~~pin~g~~g----k--g~---------~~~l~eL~e----~~~a--GA~G--fK~~eD~g~t~~~i~~aL~~A~~ 239 (567)
T cd00375 183 QAADGLPVNIGFLG----K--GN---------GSSPDALAE----QIEA--GACG--LKLHEDWGATPAAIDTCLSVADE 239 (567)
T ss_pred HHhhcCCceEEEEe----c--Cc---------cccHHHHHH----HHHc--CCEE--EEecCCCCCCHHHHHHHHHHHHh
Confidence 33333332221110 1 11 011122222 2222 2332 22333345688999999999999
Q ss_pred cCCccceeccCCcchh--H-HHHhhcC--------CCCC---hHHHHHHhccCCCccceeeccCCC-hhhHHHHHhcCCe
Q 014702 235 FKTGIHMHVAEIPYEN--Q-VVMDTRK--------VDHG---TVTFLDKIEFLQNNLLSAHTVWVN-HTEIGLLSRAGVK 299 (420)
Q Consensus 235 ~~~~v~~h~~~~~~~~--~-~~~~~~~--------~~~~---~~~~l~~~~~~~~~~~~~h~~~~~-~~~~~~~~~~~~~ 299 (420)
+++++.+|+....... | ......+ .+.+ ..+++...+. ..++.-....+ |-.++-+.++--.
T Consensus 240 ~dv~VaiHadtlne~g~~E~t~aa~~gr~iH~~H~egaggghapdi~~~~~~---~nvlp~stnpt~p~t~nt~~e~~dm 316 (567)
T cd00375 240 YDVQVAIHTDTLNESGFVEDTIAAIKGRTIHTYHTEGAGGGHAPDIIKVAGH---PNVLPSSTNPTRPFTVNTLDEHLDM 316 (567)
T ss_pred hCCEEEEECCCCCcchHHHHHHHHhcCCeEEEEecCCCCcccchHHHHhcCC---CCcccCCCCCCCCCccCchhhhcCe
Confidence 9999999997643211 1 0111000 0000 0111111111 00100000000 0000111111111
Q ss_pred EEECccch-------------hhccCcccHHHHHHcCCcEEEccCCCCCCCCCCHH-HHHHHHHHHhcccccccCCCCCC
Q 014702 300 VSHCPASA-------------MRMLGFAPIKEMLHADICVSLGTDGAPSNNRMSIV-DEMYLASLINKGREVFANGTTDP 365 (420)
Q Consensus 300 ~~~~p~~~-------------~~~~~~~~~~~~~~~gv~~~lgsD~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 365 (420)
+++|...+ .|...+..-.-|.+.|+..+++||....+.-...+ +.++.+..+.+.+...... .
T Consensus 317 ~m~~h~l~~~~~~d~~fa~srir~~ti~ae~~l~d~G~~s~~~sDs~~mgr~ge~~~r~~q~a~k~~~~~g~~~~~---~ 393 (567)
T cd00375 317 LMVCHHLDPNIPEDVAFAESRIRAETIAAEDVLHDLGAISIMSSDSQAMGRVGEVILRTWQTAHKMKAQRGPLPED---S 393 (567)
T ss_pred EEeecCCCCCCcchhhhhhhhccchhhccchhhhccCcEEEEccchhhcCccceeeechHHHHHHHHHhcCCCCcc---c
Confidence 22221111 11122233345778899999999986443222222 2333333333212211111 1
Q ss_pred CCCCH---HHHHHHHhHHHHHHccCCCcccccccCccccEEEEcCCCCCCCC
Q 014702 366 AALPA---ETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVP 414 (420)
Q Consensus 366 ~~ls~---~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~ 414 (420)
.+.+. .++++++|.|||+++|+++++|+|++||.||||||++++|...|
T Consensus 394 ~~~~n~r~~~~L~~~Tin~A~alG~~~~vGSLe~GK~ADlVv~d~~~f~~~p 445 (567)
T cd00375 394 GDADNFRVKRYIAKYTINPAIAHGISHEVGSVEVGKLADLVLWEPAFFGVKP 445 (567)
T ss_pred ccCchHHHHHHHHHhhHHHHHHcCcccCceeeCCCCccCEEEEcCcccCCCe
Confidence 12344 45599999999999999999999999999999999999887543
No 71
>cd01309 Met_dep_hydrolase_C Metallo-dependent hydrolases, subgroup C is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=99.96 E-value=6.8e-29 Score=228.80 Aligned_cols=323 Identities=17% Similarity=0.133 Sum_probs=183.9
Q ss_pred CCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhcccCCCCChHHHhhhccccccCCCChHHHHHH
Q 014702 47 QDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYIS 126 (420)
Q Consensus 47 ~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (420)
||||++|++....+ .+.++||++|++|+|||||+|+|++...........+..+ ...+..+.+...+.++.
T Consensus 1 ~gkI~~i~~~~~~~-----~~~~vid~~g~~v~Pg~id~h~h~~~~~~~~~~~~~d~~e----~~~~~~p~~~~~d~~~~ 71 (359)
T cd01309 1 DGKIVAVGAEITTP-----ADAEVIDAKGKHVTPGLIDAHSHLGLDEEGGVRETSDANE----ETDPVTPHVRAIDGINP 71 (359)
T ss_pred CCEEEEEcCCCCCC-----CCCeEEeCCCCEEcCcEEecccccCccccCCCcCcCCccc----cCCCCCceeEeecccCC
Confidence 79999999865432 3679999999999999999999998765543222211111 12233344445555555
Q ss_pred HHHHHHHHHhCCcceeeeCCccC-HH------------HHHHHHHH--hCCeeEeeehhccCCCCCCcccccCChhHHHH
Q 014702 127 TLLCGIELIHSGVTCFAEAGGQH-VS------------EMAKAVEL--LGLRACLVQSTMDCGEGLPASWAVRTTDDCIQ 191 (420)
Q Consensus 127 ~~~~~~~~~~~Gvtt~~~~~~~~-~~------------~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (420)
....+..++++|||++...++.. .- ...+...+ ..++..++....... +.. ............
T Consensus 72 ~~~~~~~a~~~GvT~~~v~p~~~~~~gg~~~~i~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~-~~~-~~~p~trmg~~~ 149 (359)
T cd01309 72 DDEAFKRARAGGVTTVQVLPGSANLIGGQGVVIKTDGGTIEDMFIKAPAGLKMALGENPKRVY-GGK-GKEPATRMGVAA 149 (359)
T ss_pred CCHhHHHHHhcCceEEEecCCCCCcccceEEEEECCCCCHHHhcccCCceeEEecCCCCcccc-ccc-CCCccchHHHHH
Confidence 55677788899999997644211 00 00011111 111111111000000 000 000011111111
Q ss_pred HHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCChHHHHHHhc
Q 014702 192 SQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIE 271 (420)
Q Consensus 192 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 271 (420)
...+.+.+............-.....+ .....++.+...++. .+++.+|+..... ...+++...
T Consensus 150 ~lr~~~~~a~~y~~~~~~~~~~~~~~~-~~d~~l~~l~~~~~~-~~~v~vHa~~~~~--------------i~~~l~~~~ 213 (359)
T cd01309 150 LLRDAFIKAQEYGRKYDLGKNAKKDPP-ERDLKLEALLPVLKG-EIPVRIHAHRADD--------------ILTAIRIAK 213 (359)
T ss_pred HHHHHHHHHHHHHHHhhhhhhcccCCC-CCCccHHHHHHHHcC-CeeEEEEeCCHHH--------------HHHHHHHHH
Confidence 111111111000000000000000000 011234445554443 3889999975322 122233333
Q ss_pred cCCCccceeeccCCChhhHHHHHhcCCeEEECccchhhc------cCcccHHHHHHcC-CcEEEccCCCCCCCCCCHHHH
Q 014702 272 FLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM------LGFAPIKEMLHAD-ICVSLGTDGAPSNNRMSIVDE 344 (420)
Q Consensus 272 ~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~------~~~~~~~~~~~~g-v~~~lgsD~~~~~~~~~~~~~ 344 (420)
.++.+.++.|+... ++.++++++.++.++++|.++... .+..+++.+.++| ++++++||++..+. ..+...
T Consensus 214 e~g~~~~i~H~~~~-~~~~~~la~~gv~v~~~P~~~~~~~~~~~~~~~~~~~~l~~aGGv~valgsD~~~~~~-~~l~~~ 291 (359)
T cd01309 214 EFGIKITIEHGAEG-YKLADELAKHGIPVIYGPTLTLPKKVEEVNDAIDTNAYLLKKGGVAFAISSDHPVLNI-RNLNLE 291 (359)
T ss_pred HcCCCEEEECchhH-HHHHHHHHHcCCCEEECccccccccHHHhhcchhhHHHHHHcCCceEEEECCCCCccc-hhHHHH
Confidence 33445788999876 778899999999999999765322 3567888999998 99999999965321 122222
Q ss_pred HHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEcCCCCCCC
Q 014702 345 MYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMV 413 (420)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~ 413 (420)
+..+. ..+++.+++++++|.|||+++|+++++|+|++|+.|||||||.+|++..
T Consensus 292 ~~~a~---------------~~gl~~~~al~~~T~n~A~~lg~~~~~G~l~~G~~ADlvv~d~dpl~~~ 345 (359)
T cd01309 292 AAKAV---------------KYGLSYEEALKAITINPAKILGIEDRVGSLEPGKDADLVVWNGDPLEPT 345 (359)
T ss_pred HHHHH---------------HcCCCHHHHHHHHHHHHHHHhCCCCCcccCCCCCccCEEEECCCccccc
Confidence 22211 1359999999999999999999998899999999999999999988753
No 72
>COG0044 PyrC Dihydroorotase and related cyclic amidohydrolases [Nucleotide transport and metabolism]
Probab=99.96 E-value=2.5e-28 Score=225.66 Aligned_cols=322 Identities=18% Similarity=0.238 Sum_probs=188.4
Q ss_pred ceEEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhcccC
Q 014702 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (420)
Q Consensus 19 ~~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~~ 98 (420)
++++|+|++|++. ...+.++|.|++|+|++|+..... . .+.++||++|++|+|||||.|+|+..
T Consensus 1 ~~~lIk~~~iv~~----~~~~~~di~i~~g~I~~Ig~~l~~----~-~~~~iiD~~g~~v~PG~ID~HVH~re------- 64 (430)
T COG0044 1 MDLLIKNARVVDP----GEDEVADILIKDGKIAAIGKNLEP----T-SGAEIIDAKGLLVLPGLVDLHVHFRE------- 64 (430)
T ss_pred CcEEEeccEEEcC----CCceEecEEEECCEEEEeccCCCC----C-CCCcEEECCCCEEccCeeEEEEecCC-------
Confidence 3689999999953 234678999999999999986442 1 37899999999999999999999932
Q ss_pred CCCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCccCH----H----HHHHHHHHhCCeeEeeehh
Q 014702 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHV----S----EMAKAVELLGLRACLVQST 170 (420)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~~~----~----~~~~~~~~~g~~~~~~~~~ 170 (420)
+.+...+. ..-..+.++++|+|++.+|+.... . ...+.++....-.+.....
T Consensus 65 -----------------pg~~~ke~---~~tgs~AAa~GG~Ttv~dmPnt~P~~~~~~~~~~~~~~a~~~~~vd~~~~~~ 124 (430)
T COG0044 65 -----------------PGFEHKET---FETGSRAAAAGGVTTVVDMPNTKPPIDTAEALEDKLERAKGKSVVDYAFYGG 124 (430)
T ss_pred -----------------CCcchhhh---HHHHHHHHHcCCceEEEECCCCCCCCCCHHHHHHHHHHhhccceeEEEEEEE
Confidence 22222222 223567889999999999875321 1 1122222111111111111
Q ss_pred ccCCCCCCcccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHcCCccceeccCCcchh
Q 014702 171 MDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYEN 250 (420)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~ 250 (420)
...+ .. ...+..+... ...++.+..... .......+++..+.+.+.+..+.+|+.......
T Consensus 125 it~~-----------~~----~~~~~~~~~~---~~g~~~F~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~H~Ed~~~~~ 185 (430)
T COG0044 125 LTKG-----------NL----GKLELTERGV---EAGFKGFMDDST-GALDDDVLEEALEYAAELGALILVHAEDDDLIA 185 (430)
T ss_pred Eecc-----------cc----chhhhhhhhh---ccceEEEecCCc-CcCCHHHHHHHHHHHHhcCCeEEEecCChhHhh
Confidence 1110 00 0011111111 112233333222 346778899999999999999999997764322
Q ss_pred HHHHhh------cCCCCChH-------H-HHHHhccCCCccceeeccCCCh-hhH---HHHHhcC--CeEEECccchhh-
Q 014702 251 QVVMDT------RKVDHGTV-------T-FLDKIEFLQNNLLSAHTVWVNH-TEI---GLLSRAG--VKVSHCPASAMR- 309 (420)
Q Consensus 251 ~~~~~~------~~~~~~~~-------~-~l~~~~~~~~~~~~~h~~~~~~-~~~---~~~~~~~--~~~~~~p~~~~~- 309 (420)
+..... ......+. . .+......+ .-.|..|+|- +.+ ...+..| +++.+||.+...
T Consensus 186 ~~~~~~g~~~~~~~~~~~p~~aE~~~iar~~~la~~~g---~~vhi~HiSt~~sv~li~~ak~~g~~vt~EvtphHL~l~ 262 (430)
T COG0044 186 EGVMNEGLRAPELGLAGRPPIAEASAIARDLELARATG---ARVHICHISTKESVELIRAAKAEGIRVTAEVTPHHLLLD 262 (430)
T ss_pred hHHHhcCccchhhccCCCChHHHHHHHHHHHHHHHHhC---CcEEEEEcCCHHHHHHHHHHhhcCCceEEeecchheEcc
Confidence 111110 00001110 0 111112222 2345555553 334 4444444 446677765321
Q ss_pred ----------ccCcccHH---------HHHHcCCcEEEccCCCCCCCC------------CCHHHHHHHHHHHhcccccc
Q 014702 310 ----------MLGFAPIK---------EMLHADICVSLGTDGAPSNNR------------MSIVDEMYLASLINKGREVF 358 (420)
Q Consensus 310 ----------~~~~~~~~---------~~~~~gv~~~lgsD~~~~~~~------------~~~~~~~~~~~~~~~~~~~~ 358 (420)
..-.+|++ +.++.|...+++|||.|+... +.-++.. ...++.-
T Consensus 263 ~~~~~~~~~~~k~nPPLR~~~dr~aL~~~l~~G~ID~iasDHaPht~eeK~~~f~~ap~G~~glE~~-lpl~l~l----- 336 (430)
T COG0044 263 EEDIEDLGTLAKVNPPLRDEEDREALWEALKDGVIDVIASDHAPHTLEEKRLPFEEAPSGIPGLETA-LPLLLTL----- 336 (430)
T ss_pred HhHhhccCcceEECCCCCCHHHHHHHHHHHhCCCCcEEEcCCCCCCHHHhccchhhCCCCCccHHHH-HHHHHHH-----
Confidence 11234543 456789999999999986421 1111111 1111110
Q ss_pred cCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEcCCC
Q 014702 359 ANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFS 409 (420)
Q Consensus 359 ~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~ 409 (420)
.....+|++++++++|.|||+++|+.. +|.|++|++|||+|+|.+.
T Consensus 337 ----v~~g~lsl~~~v~~~S~nPA~ifgl~~-~g~i~~G~~ADl~lvD~~~ 382 (430)
T COG0044 337 ----VKKGRLSLERLVELLSTNPARIFGLPP-KGAIEEGADADLVLVDPDE 382 (430)
T ss_pred ----HHcCCcCHHHHHHHHhhCHHHHhCCCC-CCcccCCCccCEEEEcCCC
Confidence 012359999999999999999999976 7899999999999999994
No 73
>PRK09061 D-glutamate deacylase; Validated
Probab=99.96 E-value=1.3e-26 Score=221.91 Aligned_cols=336 Identities=17% Similarity=0.136 Sum_probs=192.9
Q ss_pred CCceEEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhcc
Q 014702 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (420)
Q Consensus 17 ~~~~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~ 96 (420)
++++++|+|++|++++ +.....++|+|+||+|++|++... .+.++||++|++|+|||||+|+|...
T Consensus 17 ~~~~~li~~~~vid~~--~~~~~~~~v~I~~G~I~~ig~~~~-------~~~~viD~~g~~v~PG~ID~H~H~~~----- 82 (509)
T PRK09061 17 APYDLVIRNGRVVDPE--TGLDAVRDVGIKGGKIAAVGTAAI-------EGDRTIDATGLVVAPGFIDLHAHGQS----- 82 (509)
T ss_pred ccCCEEEECcEEEeCC--CCeeccceEEEECCEEEEecCCCC-------CCCeEEeCCCCEEecCeEeeeeCCCC-----
Confidence 4578999999999543 444456799999999999987421 35689999999999999999999831
Q ss_pred cCCCCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCC-c-cCHHHHHHHHHHhC--CeeEe--eeh-
Q 014702 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG-G-QHVSEMAKAVELLG--LRACL--VQS- 169 (420)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~-~-~~~~~~~~~~~~~g--~~~~~--~~~- 169 (420)
+. .....+..||||++++. + .......+.....+ ++... +..
T Consensus 83 ----------------------~~---------~~~~~~~~GvTtvv~~~~~~~p~~~~~~~~~~~~~~vn~~~~~~~~~ 131 (509)
T PRK09061 83 ----------------------VA---------AYRMQAFDGVTTALELEAGVLPVARWYAEQAGEGRPLNYGASVGWTP 131 (509)
T ss_pred ----------------------Cc---------cchhhccCCceeEEeeccCCCCHHHHHHHHHhcCCcceeehhcCcHH
Confidence 00 01235688999999872 2 22233333333333 22211 110
Q ss_pred ----hccCCCCCC------------c-ccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHH
Q 014702 170 ----TMDCGEGLP------------A-SWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMA 232 (420)
Q Consensus 170 ----~~~~~~~~~------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a 232 (420)
++ .++-.. . ..........+.+..+++++....+...++ ......+..+.+.+.++++.+
T Consensus 132 ~R~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~m~~ll~~al~~Ga~gis--~~~~y~p~~~~~eL~~l~~~A 208 (509)
T PRK09061 132 ARIAVL-TGPQAEGTIADFGKALGDPRWQERAATPAELAEILELLEQGLDEGALGIG--IGAGYAPGTGHKEYLELARLA 208 (509)
T ss_pred HHHHHh-CCcccccccccccccccccccccCCCCHHHHHHHHHHHHHHHHCCCCEEe--cCCccCCCCCHHHHHHHHHHH
Confidence 00 110000 0 000111234455556666554444433333 223333456888999999999
Q ss_pred HHcCCccceeccCCcchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCCCh-------hhHHHHHhcCCeE--EEC
Q 014702 233 REFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH-------TEIGLLSRAGVKV--SHC 303 (420)
Q Consensus 233 ~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~-------~~~~~~~~~~~~~--~~~ 303 (420)
+++|.++.+|+.+........ + .....+++......+.+..+.|...... +.++++++.|+.+ .+|
T Consensus 209 ~~~g~~v~~H~e~~~~~~~~~-e----~~av~~~i~lA~~~G~rv~IsHlss~g~~~~~~~le~I~~Ar~~Gi~Vt~e~~ 283 (509)
T PRK09061 209 ARAGVPTYTHVRYLSNVDPRS-S----VDAYQELIAAAAETGAHMHICHVNSTSLRDIDRCLALVEKAQAQGLDVTTEAY 283 (509)
T ss_pred HHcCCEEEEEecCcccCCchh-H----HHHHHHHHHHHHHhCCCEEEEeeccCCcccHHHHHHHHHHHHHcCCcEEEEec
Confidence 999999999998754310000 0 0012233444445556677778765432 2356666677654 577
Q ss_pred ccch-----------h--h------c---cC---ccc----------------------------------HHHHHHcCC
Q 014702 304 PASA-----------M--R------M---LG---FAP----------------------------------IKEMLHADI 324 (420)
Q Consensus 304 p~~~-----------~--~------~---~~---~~~----------------------------------~~~~~~~gv 324 (420)
|++. . . . .- .+| +.+.+..+.
T Consensus 284 P~~~~~t~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~p~ 363 (509)
T PRK09061 284 PYGAGSTVVGAAFFDPGWLERMGLGYGSLQWVETGERLLTREELAKLRANDPGGLVLIHFLDEDNPRDRALLDRSVLFPG 363 (509)
T ss_pred CcchhhhhhcccccCHHHHHHhCCCHHHheehhcccccCCHHHHHHHhccCCCCeEEEEeccCCCCccchhHHHHhCCCC
Confidence 7761 0 0 0 00 111 233444454
Q ss_pred cEEEccCCCCCCCC------------C-CHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcc-----
Q 014702 325 CVSLGTDGAPSNNR------------M-SIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVL----- 386 (420)
Q Consensus 325 ~~~lgsD~~~~~~~------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lg----- 386 (420)
. +++|||.|.... . ....+.+.+....+....+. .....+|++++++++|.+||+++|
T Consensus 364 ~-~i~sD~~p~~~~~~~~~~~~~~~~~~~~~~h~r~~~~~~~~l~~~v---~~~~~isl~~ai~~~T~~pA~~lg~~~~~ 439 (509)
T PRK09061 364 A-AIASDAMPWTWSDGTVYEGDAWPLPEDAVSHPRSAGTFARFLREYV---RERKALSLLEAIRKCTLMPAQILEDSVPA 439 (509)
T ss_pred c-eEecCCccccccccccccccccccccCCCCCchhhcchHHHHHHHH---hhcccCCHHHHHHHHHHHHHHHhcccccc
Confidence 4 999999653100 0 01101111111111000000 011249999999999999999999
Q ss_pred CCCcccccccCccccEEEEcCCCC
Q 014702 387 WDNDIGSLEAGKKADMVVVDPFSW 410 (420)
Q Consensus 387 l~~~~G~l~~G~~ADlvv~d~~~~ 410 (420)
+.+ +|+|++|+.|||+|||++.+
T Consensus 440 l~~-~G~i~~G~~ADlvv~D~~~~ 462 (509)
T PRK09061 440 MRR-KGRLQAGADADIVVFDPETI 462 (509)
T ss_pred ccC-CEeeCCCCCcCEEEEchhhc
Confidence 865 59999999999999998854
No 74
>COG1820 NagA N-acetylglucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism]
Probab=99.96 E-value=1.3e-27 Score=210.76 Aligned_cols=330 Identities=20% Similarity=0.251 Sum_probs=196.9
Q ss_pred EEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhcccCCC
Q 014702 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (420)
Q Consensus 21 ~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~~~~ 100 (420)
.+|+|++||+. ..++.++.+.|+||+|.+|.+ .+.+ ...++||.+|.+|+|||||.|+|.....
T Consensus 2 ~~~~~~~i~t~---~~~~~~~~v~i~dg~I~~i~~-~~~p-----~~~e~id~~G~~l~PGfID~hihG~gG~------- 65 (380)
T COG1820 2 YALKNGRIFTG---HGVLDGGAVVIEDGKIEAVVP-AELP-----ADAEIIDLKGALLVPGFIDLHIHGGGGA------- 65 (380)
T ss_pred ceeeccEEEcC---cceEECcEEEEcCCEEEEEec-CcCC-----CcceeecCCCCEecccEEEEeecCcCcc-------
Confidence 46899999964 457788899999999999998 2332 4889999999999999999999995411
Q ss_pred CChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCcc-CHHHH-------HHHHHHhCCeeEeeehhcc
Q 014702 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-HVSEM-------AKAVELLGLRACLVQSTMD 172 (420)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~-~~~~~-------~~~~~~~g~~~~~~~~~~~ 172 (420)
.+.+.........-.+.+++.|+|++...--. ..+.+ .+.....+-. -..+.-
T Consensus 66 ----------------~~~D~~~~~~l~~i~~~~~~~GtTsfLpT~iT~~~e~i~~al~~~~e~~~~~ga~---ilGiHL 126 (380)
T COG1820 66 ----------------DFMDAGSVETLETMAEAHLRHGTTSFLPTLITASLEKIKAALRAIREAIAKGGAQ---ILGIHL 126 (380)
T ss_pred ----------------cccCccCHHHHHHHHHHhhhcCeeeeeeecccCCHHHHHHHHHHHHHHHhccCCc---eEEEEe
Confidence 11111112223334467889999998764322 22211 1222211111 133455
Q ss_pred CCCCCCcccccCChhHHHH-HHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHcCCccceeccCCcchhH
Q 014702 173 CGEGLPASWAVRTTDDCIQ-SQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQ 251 (420)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~ 251 (420)
+||+++......+...+++ ...+.++++.....+.++. +.+.....-+.+ +++...+.|+.+.+-.....+ +
T Consensus 127 EGP~ls~~kkGAh~~~~ir~~~~~~~~~~~~~a~g~i~~-vTlAPE~~~~~e----~i~~l~~~giivs~GHS~Aty--e 199 (380)
T COG1820 127 EGPFLSPEKKGAHNPEYIRPPDPEELEQLIAAADGLIKL-VTLAPELDGTKE----LIRLLANAGIVVSIGHSNATY--E 199 (380)
T ss_pred ecCccCHhhccCCCHHHhCCCCHHHHHHHHhhccCceEE-EEECCCCCCCHH----HHHHHHhCCeEEEecCccccH--H
Confidence 8999999999888888875 4455566776666654544 222222222333 334555566665543322222 1
Q ss_pred HHHhhcCCCCC-hHHHHHHhccCCC----------------ccceeeccCCChhhHHHHHhcC-CeEEECccchhhccCc
Q 014702 252 VVMDTRKVDHG-TVTFLDKIEFLQN----------------NLLSAHTVWVNHTEIGLLSRAG-VKVSHCPASAMRMLGF 313 (420)
Q Consensus 252 ~~~~~~~~~~~-~~~~l~~~~~~~~----------------~~~~~h~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~ 313 (420)
........+.. ..-++..+..+.. -.++..+.|++|.-++...+.. ..=.++....++..+.
T Consensus 200 ~~~~a~~~Ga~~~THlfNaMs~l~hREPGvvGA~L~~~~~~~eiIaDG~HVhP~~~~ia~~~kg~~~i~LVTDam~a~G~ 279 (380)
T COG1820 200 QARAAFEAGATFVTHLFNAMSGLHHREPGVVGAALDNPDVYAEIIADGVHVHPAAIRLALKAKGGDKIVLVTDAMAAAGL 279 (380)
T ss_pred HHHHHHHhCccEEEeeccCCCCCCCCCCcccceeecCCCeEEEEEccCcccCHHHHHHHHhccCCceEEEEEccccccCC
Confidence 11111000000 0001111111111 1257889999999887766654 2211222222332222
Q ss_pred ----ccHHH---HHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcc
Q 014702 314 ----APIKE---MLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVL 386 (420)
Q Consensus 314 ----~~~~~---~~~~gv~~~lgsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lg 386 (420)
+.+.. ..+.| ...-+|+...+..+.|.+.++....+ .+++++||++|+|.+||+.+|
T Consensus 280 ~dg~y~lgg~~V~v~~g--~~~~~~GtLAGS~Ltm~~avrn~v~~--------------~~~~~~eAv~maS~~PA~~lg 343 (380)
T COG1820 280 PDGEYILGGQTVTVADG--ARRLEDGTLAGSTLTMDEAVRNLVEW--------------GGISLAEAVRMASLNPAKALG 343 (380)
T ss_pred CCccEEECCEEEEEECC--EEECCCCceeeeeeeHHHHHHHHHHH--------------hCCCHHHHHHHhhhhHHHHhC
Confidence 11111 12334 33345665555667787777766443 249999999999999999999
Q ss_pred CCCcccccccCccccEEEEcCC
Q 014702 387 WDNDIGSLEAGKKADMVVVDPF 408 (420)
Q Consensus 387 l~~~~G~l~~G~~ADlvv~d~~ 408 (420)
+++++|+|++||+||||+||.|
T Consensus 344 l~~~~G~i~~G~~Adlvvld~d 365 (380)
T COG1820 344 LDDRLGSIKPGKDADLVVLDDD 365 (380)
T ss_pred CcCcccccCCCcccCEEEECCC
Confidence 9999999999999999999987
No 75
>PRK08044 allantoinase; Provisional
Probab=99.96 E-value=6.5e-27 Score=221.54 Aligned_cols=328 Identities=17% Similarity=0.216 Sum_probs=183.5
Q ss_pred CceEEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhccc
Q 014702 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (420)
Q Consensus 18 ~~~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~ 97 (420)
++|++|+|++|++.+ + ...++|+|+||+|++|++... .+.++||++|++|+|||||.|+|+...
T Consensus 2 ~~~~~i~n~~vi~~~--~--~~~~~i~I~dg~I~~i~~~~~-------~~~~~iD~~G~~v~Pg~iD~h~h~~~~----- 65 (449)
T PRK08044 2 SFDLIIKNGTVILEN--E--ARVVDIAVKGGKIAAIGQDLG-------DAKEVMDASGLVVSPGMVDAHTHISEP----- 65 (449)
T ss_pred CceEEEECcEEEcCC--C--CEEEEEEEECCEEEEecCCCC-------CCCeEEECCCCEEcCCeeccccccCCC-----
Confidence 468999999999633 2 234799999999999987421 256899999999999999999998321
Q ss_pred CCCCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCc-c----CHHHHHH-HHHHhCCeeEeeehhc
Q 014702 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-Q----HVSEMAK-AVELLGLRACLVQSTM 171 (420)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~-~----~~~~~~~-~~~~~g~~~~~~~~~~ 171 (420)
.....+ ........++++|||++++++. . ...+.++ ..+...-+........
T Consensus 66 -------------------~~~~~e---~~~~~~~aa~~gGvTtv~d~~~~~~p~~~~~~~~~~~~~~~~~~s~vd~~~~ 123 (449)
T PRK08044 66 -------------------GRSHWE---GYETGTRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQL 123 (449)
T ss_pred -------------------Cccccc---cHHHHHHHHHhCCceEEECCccCCCCCCCcHHHHHHHHHHhccCCeeeEEEE
Confidence 001111 1122446788999999999872 1 1222222 2222111111111110
Q ss_pred cCCCCCCcccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeecc-------ccccCHHHHHHHHHHHHHcCCccceecc
Q 014702 172 DCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQ-------IMNATDRLLLETRDMAREFKTGIHMHVA 244 (420)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-------~~~~~~~~l~~~~~~a~~~~~~v~~h~~ 244 (420)
. +... . ...+..++. ..+...++.++.+.+ ........+.+.++.+.+.+.++.+|+.
T Consensus 124 -~--~~~~-----~---~~~ei~~l~----~~gv~~fk~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~H~E 188 (449)
T PRK08044 124 -G--GLVS-----Y---NLDRLHELD----EVGVVGFKCFVATCGDRGIDNDFRDVNDWQFYKGAQKLGELGQPVLVHCE 188 (449)
T ss_pred -e--eeCC-----C---CHHHHHHHH----HcCceEEEEEecccCcccccCCccCcCHHHHHHHHHHHHhcCCEEEEecC
Confidence 0 1110 0 122222222 122233444332211 1123455677777888889999999997
Q ss_pred CCcchhHHHHhhc--C-------CCCCh-----H---HHHHHhccCCCccceeeccCCCh----hhHHHHHhcC--CeEE
Q 014702 245 EIPYENQVVMDTR--K-------VDHGT-----V---TFLDKIEFLQNNLLSAHTVWVNH----TEIGLLSRAG--VKVS 301 (420)
Q Consensus 245 ~~~~~~~~~~~~~--~-------~~~~~-----~---~~l~~~~~~~~~~~~~h~~~~~~----~~~~~~~~~~--~~~~ 301 (420)
......+...... + ....+ . ..+......+.+ .|..|++. +.+...++.| +++.
T Consensus 189 ~~~l~~~~~~~~~~~G~~~~~~~~~~~P~~~E~~~v~r~~~lA~~~g~~---vhi~HiSt~~~~~~i~~ak~~G~~it~e 265 (449)
T PRK08044 189 NALICDELGEEAKREGRVTAHDYVASRPVFTEVEAIRRVLYLAKVAGCR---LHVCHISSPEGVEEVTRARQEGQDVTCE 265 (449)
T ss_pred CHHHHHHHHHHHHhcCCCChhhccccCCHHHHHHHHHHHHHHHHHhCCC---EEEEeCCCHHHHHHHHHHHHCCCCEEEE
Confidence 7654222111100 0 00011 0 112222222333 34444442 3345555565 5566
Q ss_pred ECccchhhc-----------cCcccHH---------HHHHcCCcEEEccCCCCCCCCC---CHHHH--------HHHHHH
Q 014702 302 HCPASAMRM-----------LGFAPIK---------EMLHADICVSLGTDGAPSNNRM---SIVDE--------MYLASL 350 (420)
Q Consensus 302 ~~p~~~~~~-----------~~~~~~~---------~~~~~gv~~~lgsD~~~~~~~~---~~~~~--------~~~~~~ 350 (420)
+||.+.... .-.+|++ +.+..|+..+|+|||.|+.... ++++. ......
T Consensus 266 ~~~h~L~l~~~~~~~~~~~~k~~PPlr~~~d~~aL~~~l~~G~id~i~sDH~P~~~~~K~~~~~~~~~g~~g~e~~l~~~ 345 (449)
T PRK08044 266 SCPHYFVLDTDQFEEIGTLAKCSPPIRDLENQKGMWEKLFNGEIDCLVSDHSPCPPEMKAGNIMEAWGGIAGLQNCMDVM 345 (449)
T ss_pred cChhhhcccHHHhhCCCCcEEEcCCCCChHHHHHHHHHHhCCCceEEEcCCCCCChHHccCChhhCCCCceEHHHHHHHH
Confidence 777653210 1123443 4556899999999999863211 12111 111111
Q ss_pred HhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEcCCCC
Q 014702 351 INKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSW 410 (420)
Q Consensus 351 ~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~ 410 (420)
+... ....+++++++++++|.|||+++|+.+ +|+|++|++|||+|||++..
T Consensus 346 ~~~~--------v~~~~l~~~~~v~~~s~npA~~lgl~~-~G~i~~G~~ADlvi~d~~~~ 396 (449)
T PRK08044 346 FDEA--------VQKRGMSLPMFGKLMATNAADIFGLQQ-KGRIAPGKDADFVFIQPNSS 396 (449)
T ss_pred HHHH--------HHcCCCCHHHHHHHHHHhHHHHhCCCC-CCcCCCCCccCEEEECCCCc
Confidence 1110 012359999999999999999999954 69999999999999998844
No 76
>PRK09059 dihydroorotase; Validated
Probab=99.96 E-value=8.8e-27 Score=218.85 Aligned_cols=329 Identities=14% Similarity=0.128 Sum_probs=184.8
Q ss_pred CCceEEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhcc
Q 014702 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (420)
Q Consensus 17 ~~~~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~ 96 (420)
++.+++|+|++|++.+ +....+++|+|+||+|++|++..... ..+ ...++||++|++|+|||||+|+|+...
T Consensus 1 ~~~~~~i~n~~v~~~~--~~~~~~~~v~I~~G~I~~i~~~~~~~-~~~-~~~~viDa~G~~v~PG~ID~HvH~~~~---- 72 (429)
T PRK09059 1 MMRPILLANARIIDPS--RGLDEIGTVLIEDGVIVAAGKGAGNQ-GAP-EGAEIVDCAGKAVAPGLVDARVFVGEP---- 72 (429)
T ss_pred CCcCEEEEeeEEECCC--CCcccceEEEEECCEEEEecCccccc-cCC-CCCeEEECCCCEEeccEEecccccCCC----
Confidence 4678999999999644 34445789999999999998743210 001 256899999999999999999998320
Q ss_pred cCCCCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCccC----HHH----HHHHHHHh-CCeeEee
Q 014702 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH----VSE----MAKAVELL-GLRACLV 167 (420)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~~----~~~----~~~~~~~~-g~~~~~~ 167 (420)
.... ........+.++.+|||++++++... ..+ ..+.++.. .+.....
T Consensus 73 --------------------~~~~---~e~~~~~s~aa~~gGvTtv~~~p~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~ 129 (429)
T PRK09059 73 --------------------GAEH---RETIASASRAAAAGGVTSIIMMPDTDPVIDDVALVEFVKRTARDTAIVNIHPA 129 (429)
T ss_pred --------------------Cchh---hhhHHHHHHHHHhCCcEEEEeccCCCCCCCCHHHHHHHHHHhcccCcccEEEE
Confidence 0011 11122244678899999999987431 111 11222211 2222211
Q ss_pred ehhccCCCCCCcccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHcCCccceeccCCc
Q 014702 168 QSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIP 247 (420)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~ 247 (420)
.... .+ . ....+.+...+ ... + +..+. .......+...+.++++.+++.+..+.+|+....
T Consensus 130 ~~~~-~~--~--------~~~~l~e~~~l----~~~--G-v~~f~-~~~~~~~~~~~l~~~~~~~~~~~~~v~~H~E~~~ 190 (429)
T PRK09059 130 AAIT-KG--L--------AGEEMTEFGLL----RAA--G-AVAFT-DGRRSVANTQVMRRALTYARDFDAVIVHETRDPD 190 (429)
T ss_pred eEEe-cC--C--------CCcchHHHHHH----Hhc--C-cEEEe-cCCcccCCHHHHHHHHHHHHhcCCEEEEecCChh
Confidence 1110 00 0 01112222222 111 2 22211 1112233556688888999999999999997754
Q ss_pred chhH------HHHhhcCCCCCh-----HH---HHHHhccCCCccceeeccCCCh-hh---HHHHHhcC--CeEEECccch
Q 014702 248 YENQ------VVMDTRKVDHGT-----VT---FLDKIEFLQNNLLSAHTVWVNH-TE---IGLLSRAG--VKVSHCPASA 307 (420)
Q Consensus 248 ~~~~------~~~~~~~~~~~~-----~~---~l~~~~~~~~~~~~~h~~~~~~-~~---~~~~~~~~--~~~~~~p~~~ 307 (420)
.... ......+....+ .. .+......+.+ .|..|++- +. +..+++.| +++.+||.+.
T Consensus 191 l~~~~~~~~~~~~~~~~~~~rP~~aE~~av~r~~~la~~~~~~---~hi~hvs~~~~~~~i~~ak~~g~~vt~ev~phhL 267 (429)
T PRK09059 191 LGGNGVMNEGLFASWLGLSGIPREAEVIPLERDLRLAALTRGR---YHAAQISCAESAEALRRAKDRGLKVTAGVSINHL 267 (429)
T ss_pred hhcCCCcCCcHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHCCc---EEEEecCCHHHHHHHHHHHHCCCCEEEeecHHHH
Confidence 3110 000011111111 11 11112223333 45555543 33 44455566 5566888753
Q ss_pred hh-----------ccCcccHH---------HHHHcCCcEEEccCCCCCCC------------CCCHHHHHHHHHHHhccc
Q 014702 308 MR-----------MLGFAPIK---------EMLHADICVSLGTDGAPSNN------------RMSIVDEMYLASLINKGR 355 (420)
Q Consensus 308 ~~-----------~~~~~~~~---------~~~~~gv~~~lgsD~~~~~~------------~~~~~~~~~~~~~~~~~~ 355 (420)
.. ....+|++ +.+.+|...+++|||.|+.. ++.-++.+.... +..
T Consensus 268 ~l~~~~~~~~~~~~kvnPPLR~~~d~~~L~~~l~~g~id~i~sDh~p~~~~~K~~~~~~~~~G~~gle~~l~~~-~~~-- 344 (429)
T PRK09059 268 SLNENDIGEYRTFFKLSPPLRTEDDRVAMVEAVASGTIDIIVSSHDPQDVDTKRLPFSEAAAGAIGLETLLAAA-LRL-- 344 (429)
T ss_pred hccHHHHhccCCccEEcCCCCCHHHHHHHHHHHHcCCCcEEEeCCCCCCHHHCcCChhhCCCCcccHHHHHHHH-HHH--
Confidence 21 12234544 45677989999999998631 111111111111 110
Q ss_pred ccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEcCCCC
Q 014702 356 EVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSW 410 (420)
Q Consensus 356 ~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~ 410 (420)
....+++++++++++|.||||++|+. +|+|++|++||||++|++..
T Consensus 345 -------v~~~~l~l~~~~~~~s~nPA~~~gl~--~G~l~~G~~ADlvl~d~~~~ 390 (429)
T PRK09059 345 -------YHNGEVPLLRLIEALSTRPAEIFGLP--AGTLKPGAPADIIVIDLDEP 390 (429)
T ss_pred -------HHcCCCCHHHHHHHHhHHHHHHhCCC--cCcccCCCcCCEEEECCCCC
Confidence 01235899999999999999999993 59999999999999998743
No 77
>TIGR00221 nagA N-acetylglucosamine-6-phosphate deacetylase.
Probab=99.96 E-value=9.6e-27 Score=213.56 Aligned_cols=337 Identities=17% Similarity=0.208 Sum_probs=195.9
Q ss_pred ceEEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhcccC
Q 014702 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (420)
Q Consensus 19 ~~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~~ 98 (420)
++++|+|++|++.+ ....+++|.|+||+|++|++..+.+ ...++||++|++|+|||||+|+|....
T Consensus 3 ~~~~i~n~~i~~~~---~~~~~~~i~V~dGkI~~I~~~~~~~-----~~~~viD~~G~~i~PGfID~HvHg~~g------ 68 (380)
T TIGR00221 3 ESYLLKDIAIVTGN---EVIDNGAVGINDGKISTVSTEAELE-----PEIKEIDLPGNVLTPGFIDIHIHGCGG------ 68 (380)
T ss_pred ceEEEEeeEEECCC---CEEeccEEEEECCEEEEEcccccCC-----CCCeEEECCCCEEccceeeeeeccccC------
Confidence 57999999999632 4556789999999999998754321 245899999999999999999998320
Q ss_pred CCCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCccCH-H---HHHHHHHH-h-CCeeEeeehhcc
Q 014702 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHV-S---EMAKAVEL-L-GLRACLVQSTMD 172 (420)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~~~-~---~~~~~~~~-~-g~~~~~~~~~~~ 172 (420)
.... . .. ........+.+++.|||++.++..... . ...+...+ . .......+.+.-
T Consensus 69 -------------~~~~-~-~~---~e~~~~~~~~~~~~GvTt~l~t~~t~~~~~~~~~l~~~~~~~~~~~~a~~lG~Hl 130 (380)
T TIGR00221 69 -------------VDTN-D-AS---FETLEIMSERLPKSGCTSFLPTLITQPDENIKQAVKNMREYLAKEKNAQALGLHL 130 (380)
T ss_pred -------------cCCC-C-CC---HHHHHHHHHHHHhcCeeEEeeeccCCCHHHHHHHHHHHHHHHhccCCceeeeEee
Confidence 0000 0 11 122223456788999999998653322 1 11222211 1 111222345556
Q ss_pred CCCCCCcccccCChhHHHH-HHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHcCCccceeccCCcchhH
Q 014702 173 CGEGLPASWAVRTTDDCIQ-SQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQ 251 (420)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~ 251 (420)
++++++......+...+++ ...+.++++.....+.++.+. +...... ..++++++.+.|+.+.+-.....++..
T Consensus 131 EGPfi~~~~~Gah~~~~i~~p~~~~~~~~~~~~~~~i~~vT-lAPE~~~----~~~~i~~l~~~gi~vs~GHs~A~~~~~ 205 (380)
T TIGR00221 131 EGPFLSPEKKGAHPPEYIREPDVELFKKFLCEAGGVITKVT-LAPEEDQ----HFELIRHLKDAGIIVSAGHTNATYELA 205 (380)
T ss_pred ecCcCChhhcCCCCHHHhhCcCHHHHHHHHHhcCCCEEEEE-ECCCCCC----hHHHHHHHHHCCeEEEeeCCCCCHHHH
Confidence 8888888888888877765 333556666554456677632 2222111 235566777778777653333222211
Q ss_pred -HHHh---------------hcCCCCChHHHHHHhccCCCccceeeccCCChhhHHHHHhcC----CeEEECccchhhc-
Q 014702 252 -VVMD---------------TRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAG----VKVSHCPASAMRM- 310 (420)
Q Consensus 252 -~~~~---------------~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~----~~~~~~p~~~~~~- 310 (420)
...+ ++....+.+...-....+ .-.++..+.|++++-++.+.+.. +.+++.......+
T Consensus 206 ~~a~~~Ga~~~THlfNaM~~~~hR~pg~vga~l~~~~~-~~elI~Dg~Hv~p~~~~~~~r~kg~~~~~lvtDa~~~~g~~ 284 (380)
T TIGR00221 206 KAAFKAGATHATHLYNAMSPIHHREPGVIGAVLDHDDV-YTEIIADGIHIHPLNIRLAKKLKGDSKLCLVTDSMAAAGAK 284 (380)
T ss_pred HHHHHcCCCeeeeeccCCCCcCCCCCcHHHHHhcCCCc-EEEEEcCCCcCCHHHHHHHHHhcCCCcEEEEeccccccCCC
Confidence 1111 111222222211111100 11356789999999888765543 2223222211111
Q ss_pred cCcccHHH---HHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccC
Q 014702 311 LGFAPIKE---MLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLW 387 (420)
Q Consensus 311 ~~~~~~~~---~~~~gv~~~lgsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl 387 (420)
.+.+.+.. .++.|. ..+ .|+.-.+..+.+.+.++..... .+++++++++++|.|||+++|+
T Consensus 285 ~G~y~l~~~~v~~~~g~-~~~-~~g~LAGs~ltl~~~v~~l~~~--------------~~~~~~eal~~aT~npA~~lgl 348 (380)
T TIGR00221 285 DGVFIFGGKTVYIREGT-CLD-SNGTLAGSSLTMIEGARNLVEF--------------TNISLTDAARMSSLNPARALGI 348 (380)
T ss_pred CceEeECCEEEEEECCE-EEc-CCCceechhhhHHHHHHHHHHh--------------hCCCHHHHHHHHhHHHHHHhCC
Confidence 12222110 112221 112 3443344455677777665332 2499999999999999999999
Q ss_pred CCcccccccCccccEEEEcCCC
Q 014702 388 DNDIGSLEAGKKADMVVVDPFS 409 (420)
Q Consensus 388 ~~~~G~l~~G~~ADlvv~d~~~ 409 (420)
++++|+|++|+.|||+|||.+.
T Consensus 349 ~~~~G~i~~G~~ADlvv~d~~~ 370 (380)
T TIGR00221 349 DDRLGSVTVGKDANLVVFTPDF 370 (380)
T ss_pred CCCCcccCCCCcCCEEEECCCC
Confidence 8768999999999999999873
No 78
>COG3964 Predicted amidohydrolase [General function prediction only]
Probab=99.96 E-value=7.8e-27 Score=194.86 Aligned_cols=315 Identities=18% Similarity=0.192 Sum_probs=187.9
Q ss_pred CCCceEEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhc
Q 014702 16 GSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAK 95 (420)
Q Consensus 16 ~~~~~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~ 95 (420)
+++.|++++|++++ |+.....+..+|+|.||||++++. ...+ ..+++||++|++|.||+||.|+|.+.....
T Consensus 1 ~mqfdiLLt~~rli--dpa~g~d~~tniai~ngkIaa~~d-~~ap-----a~tq~Ida~Gc~VspG~iDlHvHvy~ggt~ 72 (386)
T COG3964 1 MMQFDILLTGGRLI--DPARGIDEITNIAIINGKIAAADD-YPAP-----AETQIIDADGCIVSPGLIDLHVHVYYGGTE 72 (386)
T ss_pred CCccceeeeCCeec--ccccccCccceeeeecCeEEeccC-cCCC-----hhheEEccCccEeccCeeeeeeEEecCCCc
Confidence 36789999999999 443446677899999999999994 3322 368999999999999999999999642211
Q ss_pred ccCCCCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCccC---HHHHHH---HHHHhCCeeEeeeh
Q 014702 96 GIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH---VSEMAK---AVELLGLRACLVQS 169 (420)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~~---~~~~~~---~~~~~g~~~~~~~~ 169 (420)
...+ ++ ..+.+.||||++|.|+.. .+...+ ...+..+..++..+
T Consensus 73 --------------------~~v~-pd---------~~ga~~GvTTvVDAGSaGaanf~gF~r~vie~Sr~RI~Aflnvs 122 (386)
T COG3964 73 --------------------GGVR-PD---------MYGAPNGVTTVVDAGSAGAANFDGFYRTVIEASRVRIKAFLNVS 122 (386)
T ss_pred --------------------cCcC-HH---------HccccCCceEEEecCCcCccchhhHHHHhhcchhheeeeeeecc
Confidence 1111 22 235689999999987432 111111 12222333333211
Q ss_pred hccCCCCCCcccccCChhHH-HHHHHHHHHHhcCCCCCceEEE----EeeccccccCHHHHHHHHHHHHHcCCccceecc
Q 014702 170 TMDCGEGLPASWAVRTTDDC-IQSQKELYAKHHHAADGRIRIW----FGIRQIMNATDRLLLETRDMAREFKTGIHMHVA 244 (420)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~----~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~ 244 (420)
..|.....+.. ....+ ..+..+.+++... -.+++- ....+.++.+ -++..++++...++|+++|..
T Consensus 123 --~~Gl~a~nE~~--d~~nid~d~i~aa~reh~d---~ivGlKvR~s~~~~g~~Git--Pl~la~~ia~~~klPlmvHig 193 (386)
T COG3964 123 --PPGLTASNELY--DPDNIDEDKIHAAFREHRD---VIVGLKVRVSTEDIGEYGIT--PLTLALRIANDLKLPLMVHIG 193 (386)
T ss_pred --CcceeeehhhC--ChhhCCHHHHHHHHHhCcC---cEEEEEEEeeeccccccCCc--hHHHHHHHHhhcCCceEEecC
Confidence 11111111110 11111 1233444444322 222221 1222334444 456677889999999999998
Q ss_pred CCcchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCCCh-----------hhHHHHHhcCCeEEECccchhhccCc
Q 014702 245 EIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH-----------TEIGLLSRAGVKVSHCPASAMRMLGF 313 (420)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~-----------~~~~~~~~~~~~~~~~p~~~~~~~~~ 313 (420)
+.+....+. ...+..--++.||++--+ ..+++.+++|+.+..-.-.. ...+
T Consensus 194 ePp~~~dEv----------------lerL~~GDIitHcfngkpn~~l~~dg~vr~~vrra~erGV~fD~ghG~a--sfsf 255 (386)
T COG3964 194 EPPVLMDEV----------------LERLRRGDIITHCFNGKPNTILTDDGVVRAEVRRARERGVIFDAGHGRA--SFSF 255 (386)
T ss_pred CCCccHHHH----------------HHhccCCceeeeeccCCCCCccccchhHHHHHHHHHhcceEEEccCCcc--eeeH
Confidence 854432222 223334456788875322 23567777887765432111 1122
Q ss_pred ccHHHHHHcC-CcEEEccCCCCCC-CCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcc
Q 014702 314 APIKEMLHAD-ICVSLGTDGAPSN-NRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDI 391 (420)
Q Consensus 314 ~~~~~~~~~g-v~~~lgsD~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~ 391 (420)
.-.++++..| .+..|+||-.... -....|.-.+ .+++. .+-|+++.+.++++|.|||..+++. .+
T Consensus 256 ~vAr~aia~GllP~~ISSDlh~~~~~n~Pv~dla~---~mSKl---------lalgmpl~~Vi~avT~npA~~i~l~-~~ 322 (386)
T COG3964 256 NVARRAIANGLLPDIISSDLHTITKLNGPVYDLAW---IMSKL---------LALGMPLTDVINAVTHNPAVLIGLA-EI 322 (386)
T ss_pred HHHHHHHhcCCCcceeeccceeeeecCchHHHHHH---HHHHH---------HHcCCcHHHHHHHHhcCHHHHhCcc-cc
Confidence 3356778888 5788999954321 1111222222 22221 1246999999999999999999997 57
Q ss_pred cccccCccccEEEEcCC
Q 014702 392 GSLEAGKKADMVVVDPF 408 (420)
Q Consensus 392 G~l~~G~~ADlvv~d~~ 408 (420)
|+|+||.+|||+||+..
T Consensus 323 gtLa~G~~aD~tvf~lk 339 (386)
T COG3964 323 GTLAPGAFADITVFKLK 339 (386)
T ss_pred CccCCCcccceEEEEec
Confidence 99999999999999865
No 79
>cd01305 archeal_chlorohydrolases Predicted chlorohydrolases. These metallo-dependent hydrolases from archea are part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. They have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. Some members of this subgroup are predicted to be chlorohyrolases.
Probab=99.95 E-value=3.2e-27 Score=209.28 Aligned_cols=256 Identities=21% Similarity=0.280 Sum_probs=190.5
Q ss_pred EEeecccccccccchhhhcccCCCCChHHHh---hhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCcc---CH
Q 014702 77 ILLPGFVNTHVHTSQQLAKGIADDVDLMTWL---HDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ---HV 150 (420)
Q Consensus 77 ~v~PGfID~H~H~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~---~~ 150 (420)
+|||||||+|+|+.++.++|...+.++.+|+ .+..|+.+..+.+++.+..+.....+++++|+||+.|+... ..
T Consensus 1 ~v~PG~vn~H~H~~~~~~rg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~GtTt~~d~~~~~~~~~ 80 (263)
T cd01305 1 ILIPALVNAHTHLGDSAIKEVGDGLPLDDLVAPPDGLKHRLLAQADDRELAEAMRKVLRDMRETGIGAFADFREGGVEGI 80 (263)
T ss_pred CccccceeccccHHHHHhhcCCCCCcHHHHhcCcccchHHHHHhCCHHHHHHHHHHHHHHHHhcCCeEEEEccCcchhHH
Confidence 4899999999999999999998888888866 34455667788999999999899999999999999997522 34
Q ss_pred HHHHHHHHHhCCeeEeeehhccCCCCCCcccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHH
Q 014702 151 SEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRD 230 (420)
Q Consensus 151 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~ 230 (420)
+...++..+.|++. ...++. +.. .... .++ .+ +...+++......+ ++++++
T Consensus 81 ~a~~~a~~~~g~r~---~~~~~~----~~~------~~~~---~~~-~~--------~~~~~~~~~~~~~~---l~~~~~ 132 (263)
T cd01305 81 ELLRRALGKLPVPF---EVILGR----PTE------PDDP---EIL-LE--------VADGLGLSSANDVD---LEDILE 132 (263)
T ss_pred HHHHHHHHhcCCCc---eEEecc----CCc------chHH---HHH-Hh--------hcccccCCCCCccC---HHHHHH
Confidence 56778888899984 111111 100 0011 111 11 11114445444444 899999
Q ss_pred HHHHcCCccceeccCCcchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCCChhhHHHHHhcCCeEEECccchhhc
Q 014702 231 MAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM 310 (420)
Q Consensus 231 ~a~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 310 (420)
+|+++|+++++|+.+...+. +...++.+... +. .++.|+.++++++++++++.|+.+++||.++...
T Consensus 133 ~A~~~g~~v~~H~~e~~~~~---------g~~~i~~~~~~---~~-~~i~H~~~l~~~~~~~la~~g~~v~~~P~sn~~l 199 (263)
T cd01305 133 LLRRRGKLFAIHASETRESV---------GMTDIERALDL---EP-DLLVHGTHLTDEDLELVRENGVPVVLCPRSNLYF 199 (263)
T ss_pred HHHHCCCeeEEecCCCCCCC---------CchhHHHHHhC---CC-CEEEEcCCCCHHHHHHHHHcCCcEEEChhhHHHh
Confidence 99999999999999875432 11123323332 33 3479999999999999999999999999998765
Q ss_pred -cCcccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHH
Q 014702 311 -LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKS 384 (420)
Q Consensus 311 -~~~~~~~~~~~~gv~~~lgsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~ 384 (420)
.+.+|++++.+.|+++++|||+... +..+++++++.+....+.. ..++++++++++|.|+|++
T Consensus 200 ~~g~~p~~~l~~~Gv~v~lGtD~~~~-~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~aT~~gA~~ 263 (263)
T cd01305 200 GVGIPPVAELLKLGIKVLLGTDNVMV-NEPDMWAEMEFLAKYSRLQ----------GYLSPLEILRMATVNAAEF 263 (263)
T ss_pred CCCCCCHHHHHHCCCcEEEECCCCcc-CCCCHHHHHHHHHHHhccc----------ccCCHHHHHHHHhhccccC
Confidence 6789999999999999999998654 4568999999887665421 1479999999999999974
No 80
>TIGR01178 ade adenine deaminase. The family described by this model includes an experimentally characterized adenine deaminase of Bacillus subtilis. It also include a member from Methanobacterium thermoautotrophicum, in which adenine deaminase activity has been detected.
Probab=99.95 E-value=3.7e-26 Score=218.88 Aligned_cols=304 Identities=18% Similarity=0.215 Sum_probs=174.9
Q ss_pred eEEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhcccCC
Q 014702 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (420)
Q Consensus 20 ~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~~~ 99 (420)
|++|+|++|+++.. .....++|+|+||+|++|++. .+.++||++|++|+|||||+|+|+..+
T Consensus 1 dlli~n~~ivd~~~--~~~~~~dI~I~~g~I~~ig~~---------~~~~viDa~G~~v~PG~ID~H~Hi~~~------- 62 (552)
T TIGR01178 1 DIVIKNAKIIDVYN--GEIIPGDIAIANGHIAGVGKY---------NGVKVIDALGEYAVPGFIDAHIHIESS------- 62 (552)
T ss_pred CEEEEeeEEEeCCC--CcEEeeeEEEECCEEEEecCC---------CCCeEEECCCCEEEeCeEecccccCCC-------
Confidence 57899999996433 334668999999999999874 245899999999999999999999321
Q ss_pred CCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCcc--------CHHHHHHHHHHhCCeeEeeehhc
Q 014702 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--------HVSEMAKAVELLGLRACLVQSTM 171 (420)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~--------~~~~~~~~~~~~g~~~~~~~~~~ 171 (420)
...+ ..+. ..++.+|+||+++.+.. ......+.+....++.+.....
T Consensus 63 -----------------~~~~-~~~~------~~al~~GvTtvv~~P~~~~~v~g~~~~~~~~~~a~~~~~d~~~~~~s- 117 (552)
T TIGR01178 63 -----------------MLTP-SEFA------KLVLPHGVTTVVSDPHEIANVNGEDGINFMLNNAKKTPLNFYFMLPS- 117 (552)
T ss_pred -----------------CCCh-hHHH------HHHHCCCEEEEEcCCCCCCCCCCHHHHHHHHHHhhcCCcEEEEECCC-
Confidence 1111 1122 34689999999975421 1223334444445554322211
Q ss_pred cCCCCCCcccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHcCCccceeccCCcchhH
Q 014702 172 DCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQ 251 (420)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~ 251 (420)
..++.+...... .-..++..+++++ .+--.++.++.+......+.+.++.+ +.+++.+..+..|+..-....
T Consensus 118 -~vp~~~~e~~g~--~~~~~~i~~~~~~---~~V~glke~m~~~~v~~~d~~~l~~i-~~a~~~g~~I~gHap~l~~~e- 189 (552)
T TIGR01178 118 -CVPALQFETSGA--VLTAEDIDELMEL---DEVLGLAEVMDYPGVINADIEMLNKI-NSARKRNKVIDGHCPGLSGKL- 189 (552)
T ss_pred -CCCCCcccCCCC--ccCHHHHHHHHcC---CCccEEEEEecchhhcCCCHHHHHHH-HHHHhCCCEEEecCCCCCHHH-
Confidence 111111111111 0012233333322 12223343343333333455666655 678999999999985322111
Q ss_pred HHHhhcCCCCChHHHHHHhccCCCccceeeccCCChhhHHHHHhcCCeEEECccchhhccCcccHHHHH--HcCCcEEEc
Q 014702 252 VVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRMLGFAPIKEML--HADICVSLG 329 (420)
Q Consensus 252 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~--~~gv~~~lg 329 (420)
+..+...+ ....|+.. +.++...-.++|..+...-.+..+. ...+..+. +.+.+++++
T Consensus 190 ------------L~~~~~aG-----i~~dHe~~-s~~ea~e~~~~Gm~~~ir~gs~~~n--~~~~~~~~~~~~~~~~~l~ 249 (552)
T TIGR01178 190 ------------LNKYISAG-----ISNDHEST-SIEEAREKLRLGMKLMIREGSAAKN--LEALHPLINEKNCRSLMLC 249 (552)
T ss_pred ------------HHHHHHcC-----CCCCcCcC-CHHHHHHHHHCCCEEEEeCCccccC--HHHHHHHHhhcCCceEEEE
Confidence 11111111 23467655 5555444456888877644333211 11122222 356889999
Q ss_pred cCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEcC
Q 014702 330 TDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDP 407 (420)
Q Consensus 330 sD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~ 407 (420)
||.... .+++.+......+.... ..++++++|++++|.|||+++|+++ +|+|++|+.|||+++|.
T Consensus 250 TD~~~~---~~~~~~g~l~~~v~~ai---------~~g~~~~~Al~maT~npA~~lgl~~-~G~I~pG~~ADlvvl~~ 314 (552)
T TIGR01178 250 TDDRHV---NDILNEGHINHIVRRAI---------EHGVDPFDALQMASINPAEHFGIDV-GGLIAPGDPADFVILKD 314 (552)
T ss_pred eCCCCh---hHHHhcCCHHHHHHHHH---------HcCCCHHHHHHHHHHHHHHHcCCCC-CcccCCCCcCCEEEECC
Confidence 994211 12232211211111111 1259999999999999999999975 79999999999999994
No 81
>cd00854 NagA N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate. This is the first committed step in the biosynthetic pathway to amino-sugar-nucleotides, which is needed for cell wall peptidoglycan and teichoic acid biosynthesis. Deacetylation of N-acetylglucosamine is also important in lipopolysaccharide synthesis and cell wall recycling.
Probab=99.95 E-value=1.4e-26 Score=214.74 Aligned_cols=329 Identities=23% Similarity=0.234 Sum_probs=191.2
Q ss_pred EEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhcccCCC
Q 014702 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (420)
Q Consensus 21 ~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~~~~ 100 (420)
++|+|++|++ + ....+.+|.|++|+|+.|++....+ ...++||++|++|+|||||+|+|+....
T Consensus 1 ~~i~~~~v~~--~--~~~~~~~i~i~~g~I~~i~~~~~~~-----~~~~vid~~g~~l~PG~iD~H~H~~~g~------- 64 (374)
T cd00854 1 LIIKNARILT--P--GGLEDGAVLVEDGKIVAIGPEDELE-----EADEIIDLKGQYLVPGFIDIHIHGGGGA------- 64 (374)
T ss_pred CEEEeEEEeC--C--CEEcccEEEEECCEEEEecCCCCcc-----cCCcEEECCCCEecccEEEeeecccCCC-------
Confidence 4789999994 3 3557889999999999998854321 2468999999999999999999984200
Q ss_pred CChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCccCH-HHH---HH---HHHHh--CCeeEeeehhc
Q 014702 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHV-SEM---AK---AVELL--GLRACLVQSTM 171 (420)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~~~-~~~---~~---~~~~~--g~~~~~~~~~~ 171 (420)
... .. ..+ ......+.+++.|||+++++..... ... .. ...+. |.+.+ .+.
T Consensus 65 ------------~~~-~~-~~e---~~~~~~~~~~~~GvTtv~~t~~t~~~~~~~~~l~~~~~~~~~~~g~~~~---g~h 124 (374)
T cd00854 65 ------------DFM-DG-TAE---ALKTIAEALAKHGTTSFLPTTVTAPPEEIAKALAAIAEAIAEGQGAEIL---GIH 124 (374)
T ss_pred ------------CCC-CC-CHH---HHHHHHHHHHccCcceeeccccCCCHHHHHHHHHHHHHHhhcCCCCeeE---EEe
Confidence 000 00 111 1223456788999999998763222 211 11 11112 22221 123
Q ss_pred cCCCCCCcccccCChhHHH-HHHHHHHHHhcCCCCCceEEEEeeccccccCHHHH--HHHHHHHHHcCCccc-eeccCCc
Q 014702 172 DCGEGLPASWAVRTTDDCI-QSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLL--LETRDMAREFKTGIH-MHVAEIP 247 (420)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l--~~~~~~a~~~~~~v~-~h~~~~~ 247 (420)
-++++++......+....+ ....+.++++.....+.++++ ..++|.. .++++.++++|+.+. -|...+.
T Consensus 125 leGP~~~~~~~g~h~~~~~~~~~~~~~~~~~~~~~~~ik~~-------tlaPE~~~~~~~i~~~~~~gi~v~~GH~~a~~ 197 (374)
T cd00854 125 LEGPFISPEKKGAHPPEYLRAPDPEELKKWLEAAGGLIKLV-------TLAPELDGALELIRYLVERGIIVSIGHSDATY 197 (374)
T ss_pred eecCccCcccCCCCCHHHcCCcCHHHHHHHHHhcCCCEEEE-------EECCCCCChHHHHHHHHHCCeEEEeeCCcCCH
Confidence 3555554433333222221 111233444444444677775 2344444 678888999999995 6775431
Q ss_pred ch--hHHHHhhcCCC----------C---ChHHHHHHhccCCCccceeeccCCChhhHHHHHhcC--CeEEECccchhhc
Q 014702 248 YE--NQVVMDTRKVD----------H---GTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAG--VKVSHCPASAMRM 310 (420)
Q Consensus 248 ~~--~~~~~~~~~~~----------~---~~~~~l~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~--~~~~~~p~~~~~~ 310 (420)
.. .........+. + +...+.-....+ .-.++.|+.|+++++++.+.+.. -.+..++......
T Consensus 198 ~~~~~a~~~G~~~~tH~~n~m~~~~~r~~~~~~a~l~~~~~-~~~li~dg~Hv~~~~~~~~~r~~g~~~~~lvtD~~~~~ 276 (374)
T cd00854 198 EQAVAAFEAGATHVTHLFNAMSPLHHREPGVVGAALSDDDV-YAELIADGIHVHPAAVRLAYRAKGADKIVLVTDAMAAA 276 (374)
T ss_pred HHHHHHHHcCCCeeeECCCCCCCcCCCCCcHHHHhhcCCCC-eEEEEcCCCcCCHHHHHHHHHhcCCCcEEEEecccccc
Confidence 11 11111111111 1 111111111100 11257899999999999888774 4466665543221
Q ss_pred ---cCcccHHHH--HHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHc
Q 014702 311 ---LGFAPIKEM--LHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSV 385 (420)
Q Consensus 311 ---~~~~~~~~~--~~~gv~~~lgsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~l 385 (420)
.+.+++... ...+..+.+.++. ..+...++.+.++.+... .+++++++++++|.|||+++
T Consensus 277 G~~~g~y~~~~~~~~~~~~~~~~~~g~-laG~~~~l~~~~~~l~~~--------------~~l~~~~al~~aT~npA~~l 341 (374)
T cd00854 277 GLPDGEYELGGQTVTVKDGVARLADGT-LAGSTLTMDQAVRNMVKW--------------GGCPLEEAVRMASLNPAKLL 341 (374)
T ss_pred CCCCCeEEECCEEEEEECCEEEcCCCC-eeehHhhHHHHHHHHHHh--------------hCCCHHHHHHHHhHHHHHHc
Confidence 233333221 1112233444443 223345677777665432 23899999999999999999
Q ss_pred cCCCcccccccCccccEEEEcCC
Q 014702 386 LWDNDIGSLEAGKKADMVVVDPF 408 (420)
Q Consensus 386 gl~~~~G~l~~G~~ADlvv~d~~ 408 (420)
|++++.|+|++|+.|||++||.+
T Consensus 342 g~~~~~G~i~~G~~ADlvv~d~~ 364 (374)
T cd00854 342 GLDDRKGSLKPGKDADLVVLDDD 364 (374)
T ss_pred CCCCCcCCcCCCCcCCEEEECCC
Confidence 99877899999999999999987
No 82
>PRK09060 dihydroorotase; Validated
Probab=99.95 E-value=4.9e-26 Score=215.48 Aligned_cols=326 Identities=17% Similarity=0.200 Sum_probs=178.5
Q ss_pred CCceEEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhcc
Q 014702 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (420)
Q Consensus 17 ~~~~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~ 96 (420)
+.+|++|+|++|++.++ . ..++|+|+||+|++|++.... ...++||++|++|+|||||+|+|+...
T Consensus 3 ~~~d~~i~~~~v~~~~~--~--~~~~i~i~~g~I~~i~~~~~~------~~~~~iD~~G~~v~PG~ID~HvH~~~~---- 68 (444)
T PRK09060 3 QTFDLILKGGTVVNPDG--E--GRADIGIRDGRIAAIGDLSGA------SAGEVIDCRGLHVLPGVIDSQVHFREP---- 68 (444)
T ss_pred CcCcEEEECCEEECCCC--C--eeeEEEEECCEEEEecCCCCC------CCceEEECCCCEEccCEEeccccccCC----
Confidence 45689999999996432 2 357999999999999864321 246899999999999999999998321
Q ss_pred cCCCCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCccC----H-HHHHHHHHHhCCeeEeeehhc
Q 014702 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH----V-SEMAKAVELLGLRACLVQSTM 171 (420)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~~----~-~~~~~~~~~~g~~~~~~~~~~ 171 (420)
.....+.+ ....+.++.+|||++++++... . ............+......+.
T Consensus 69 --------------------~~~~~e~~---~t~~~aa~~gGvTtv~~~p~~~p~~~~~~~~~~~~~~a~~~~~~d~~~~ 125 (444)
T PRK09060 69 --------------------GLEHKEDL---ETGSRAAVLGGVTAVFEMPNTNPLTTTAEALADKLARARHRMHCDFAFY 125 (444)
T ss_pred --------------------CCCccchH---HHHHHHHHhCCcEEEEECCCCCCCCChHHHHHHHHHHhcccceeeEEEE
Confidence 11111111 1234578899999999986321 1 222222222221111111111
Q ss_pred cCCCCCCcccccCChhHHHHHHHHHHHHhcCCCCCceEEEEee--ccccccCHHHHHHHHHHHHHcCCccceeccCCcch
Q 014702 172 DCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGI--RQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYE 249 (420)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~ 249 (420)
-.+ .. ... .+..++.. +. +...++.++.. ......+...+.+++ ...+..+.+|+.+....
T Consensus 126 ~~~--~~------~~~---~~l~el~~-~~--gv~g~k~fm~~~~~~~~~~d~~~l~~~~---~~~~~~v~~H~E~~~l~ 188 (444)
T PRK09060 126 VGG--TR------DNA---DELAELER-LP--GCAGIKVFMGSSTGDLLVEDDEGLRRIL---RNGRRRAAFHSEDEYRL 188 (444)
T ss_pred ecc--CC------CCH---HHHHHHHh-hc--CceEEEEEeccCCCCcccCCHHHHHHHH---HhCCCeEEEECCCHHHH
Confidence 111 00 011 12222211 11 22234443321 111123444555443 44588899999764431
Q ss_pred hHHHHhhcCC-------CCCh--H------HHHHHhccCCCccceeeccCCChhhHHHHHhc--CCeEEECccchh----
Q 014702 250 NQVVMDTRKV-------DHGT--V------TFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRA--GVKVSHCPASAM---- 308 (420)
Q Consensus 250 ~~~~~~~~~~-------~~~~--~------~~l~~~~~~~~~~~~~h~~~~~~~~~~~~~~~--~~~~~~~p~~~~---- 308 (420)
... ...... ...+ . ..+......+.+..+.|.. +.+.++.+++. .+++.+||.+..
T Consensus 189 ~~~-~~~~~~g~~~~~~~~~p~~aE~~av~~~~~la~~~~~~lhi~h~s--t~~~v~~i~~~~~~vt~ev~ph~l~l~~~ 265 (444)
T PRK09060 189 RER-KGLRVEGDPSSHPVWRDEEAALLATRRLVRLARETGRRIHVLHVS--TAEEIDFLADHKDVATVEVTPHHLTLAAP 265 (444)
T ss_pred HHH-HHHHhcCCcccccccCCHHHHHHHHHHHHHHHHHHCCCEEEEeCC--CHHHHHHHHHhCCCeEEEeChHHhccCch
Confidence 111 111000 0000 0 1222223344444445544 35566666544 366778885431
Q ss_pred h-c-------cCccc---------HHHHHHcCCcEEEccCCCCCCC------------CCCHHHHHHHHHHHhccccccc
Q 014702 309 R-M-------LGFAP---------IKEMLHADICVSLGTDGAPSNN------------RMSIVDEMYLASLINKGREVFA 359 (420)
Q Consensus 309 ~-~-------~~~~~---------~~~~~~~gv~~~lgsD~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~ 359 (420)
. . ...+| +.+.+++|+..+++|||.|+.. ++.-.+.+ ...++...
T Consensus 266 ~~~~~~~~~~k~~PPlr~~~~~~~l~~al~~G~id~i~sDh~p~~~~~k~~~~~~~~~G~~g~e~~-~~l~~~~v----- 339 (444)
T PRK09060 266 ECYERLGTLAQMNPPIRDARHRDGLWRGVRQGVVDVLGSDHAPHTLEEKAKPYPASPSGMTGVQTL-VPIMLDHV----- 339 (444)
T ss_pred hhcccCCceEEEeCCCCCHHHHHHHHHHHhCCCccEEecCCCCCCHHHhcCCcccCCCCcccHHHH-HHHHHHHH-----
Confidence 1 0 11123 3456778999999999998631 11111111 11111110
Q ss_pred CCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEcCCCC
Q 014702 360 NGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSW 410 (420)
Q Consensus 360 ~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~ 410 (420)
....+|++++++++|.|||+++|+. ++|+|++|++|||||||.+..
T Consensus 340 ----~~g~l~~~~~~~~~s~~pa~~~gl~-~~G~l~~G~~ADlvl~d~~~~ 385 (444)
T PRK09060 340 ----NAGRLSLERFVDLTSAGPARIFGIA-GKGRIAVGYDADFTIVDLKRR 385 (444)
T ss_pred ----HcCCCCHHHHHHHHhHhHHHHhCCC-CCCcccCCCcCCEEEEcCCCC
Confidence 1124999999999999999999995 469999999999999998853
No 83
>PRK08417 dihydroorotase; Provisional
Probab=99.95 E-value=2.1e-26 Score=214.22 Aligned_cols=299 Identities=14% Similarity=0.158 Sum_probs=170.3
Q ss_pred EEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhcccCCCCChHHHhhhccccccCCCChHH
Q 014702 43 VFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEED 122 (420)
Q Consensus 43 I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (420)
|+|+||||++|++.. .+.++||++|++|+|||||+|+|+.. +....++
T Consensus 1 i~I~dG~I~~i~~~~--------~~~~viDa~g~~vlPG~ID~HvH~~~------------------------~~~~~e~ 48 (386)
T PRK08417 1 IRIKDGKITEIGSDL--------KGEEILDAKGKTLLPALVDLNVSLKN------------------------DSLSSKN 48 (386)
T ss_pred CEEECCEEEEecCCC--------CCCeEEECCCCEEccCeeEEeeeeCC------------------------CCcChhh
Confidence 689999999998752 25689999999999999999999831 1111111
Q ss_pred HHHHHHHHHHHHHhCCcceeeeCCccCH----HHHHHHHHH-hCC--eeEeeehhccCCCCCCcccccCChhHHHHHHHH
Q 014702 123 SYISTLLCGIELIHSGVTCFAEAGGQHV----SEMAKAVEL-LGL--RACLVQSTMDCGEGLPASWAVRTTDDCIQSQKE 195 (420)
Q Consensus 123 ~~~~~~~~~~~~~~~Gvtt~~~~~~~~~----~~~~~~~~~-~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (420)
.....+.++.+||||+++++.... .+..+...+ .+. ......... . .......+...
T Consensus 49 ----~~t~s~aA~aGGvTtv~dmpnt~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~------~~~~~~~~i~~ 112 (386)
T PRK08417 49 ----LKSLENECLKGGVGSIVLYPDSTPAIDNEIALELINSAQRELPMQIFPSIRA------L------DEDGKLSNIAT 112 (386)
T ss_pred ----HHHHHHHHHcCCcEEEEeCCCCCCCCCCHHHHHHHHHHhhccCCcEEEEEEE------E------CCCccHHHHHH
Confidence 123557889999999999975211 122222111 111 111111000 0 01111222222
Q ss_pred HHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHh------hcCCCCCh-----H
Q 014702 196 LYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMD------TRKVDHGT-----V 264 (420)
Q Consensus 196 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~------~~~~~~~~-----~ 264 (420)
+...+...++ . . ...+...+.++++.+++.+.++.+|+.+.......... ..+....+ .
T Consensus 113 ----l~~~Gv~~~k--~--~--~~~~~~~l~~~~~~a~~~g~~V~~HaEd~~~~~~~~~~~g~~~~~~~~~~rp~~aE~~ 182 (386)
T PRK08417 113 ----LLKKGAKALE--L--S--SDLDANLLKVIAQYAKMLDVPIFCRCEDSSFDDSGVMNDGELSFELGLPGIPSIAETK 182 (386)
T ss_pred ----HHHCCCEEEE--C--C--CCCCHHHHHHHHHHHHHcCCEEEEeCCCHHHhhHHHHhcChhhHHhCCCCCCHHHHHH
Confidence 2222222222 1 1 14577889999999999999999999775432211110 00011111 1
Q ss_pred H---HHHHhccCCCccceeeccCCC-hhhHH---HHHhcC--CeEEECccchhhc-----------cCcccHH-------
Q 014702 265 T---FLDKIEFLQNNLLSAHTVWVN-HTEIG---LLSRAG--VKVSHCPASAMRM-----------LGFAPIK------- 317 (420)
Q Consensus 265 ~---~l~~~~~~~~~~~~~h~~~~~-~~~~~---~~~~~~--~~~~~~p~~~~~~-----------~~~~~~~------- 317 (420)
. .+......+.+ .|..|+| .+.++ ..++.| +++.+||.+.... .-.+|++
T Consensus 183 ~v~~~~~la~~~~~~---lhi~hvS~~~~~~~i~~ak~~g~~vt~ev~ph~L~l~~~~~~~~~~~~k~~PPlR~~~d~~~ 259 (386)
T PRK08417 183 EVAKMKELAKFYKNK---VLFDTLALPRSLELLDKFKSEGEKLLKEVSIHHLILDDSACENFNTAAKLNPPLRSKEDRLA 259 (386)
T ss_pred HHHHHHHHHHHhCCC---EEEEeCCCHHHHHHHHHHHHCCCCEEEEechHHHeeCHHHhcCcCcccEECCCCCCHHHHHH
Confidence 1 12222233333 4555554 34444 345555 5667888754211 1124444
Q ss_pred --HHHHcCCcEEEccCCCCCCC------------CCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHH
Q 014702 318 --EMLHADICVSLGTDGAPSNN------------RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAK 383 (420)
Q Consensus 318 --~~~~~gv~~~lgsD~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~ 383 (420)
+.+.+|...+++|||.|+.. ++.-++.+.. .++... ....+++++++++++|.|||+
T Consensus 260 L~~~l~~g~Id~i~SDHaP~~~~~K~~~~~~a~~G~~g~e~~~~-~~~~~~--------v~~~~~~~~~~~~~~t~~pA~ 330 (386)
T PRK08417 260 LLEALKEGKIDFLTSLHSAKSNSKKDLAFDEAAFGIDSICEYFS-LCYTYL--------VKEGIITWSELSRFTSYNPAQ 330 (386)
T ss_pred HHHHHhcCCceEEEcCCCCCCHHHccCCHhHCCCCchHHHHHHH-HHHHHH--------HhcCCCCHHHHHHHHHHHHHH
Confidence 45677999999999998731 1111111111 111110 012348999999999999999
Q ss_pred HccCCCcccccccCccccEEEEcCCCCCCC
Q 014702 384 SVLWDNDIGSLEAGKKADMVVVDPFSWPMV 413 (420)
Q Consensus 384 ~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~ 413 (420)
++|+. + |+|++|++|||++||.+..+..
T Consensus 331 ~lgl~-~-G~l~~G~~ADlvi~d~~~~~~~ 358 (386)
T PRK08417 331 FLGLN-S-GEIEVGKEADLVLFDPNESTII 358 (386)
T ss_pred HhCCC-C-CccCCCCcCCEEEEcCCCCeEe
Confidence 99995 3 9999999999999999854443
No 84
>cd01307 Met_dep_hydrolase_B Metallo-dependent hydrolases, subgroup B is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=99.95 E-value=3.6e-25 Score=203.24 Aligned_cols=297 Identities=19% Similarity=0.180 Sum_probs=174.0
Q ss_pred eEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhcccCCCCChHHHhhhccccccCCCChH
Q 014702 42 GVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEE 121 (420)
Q Consensus 42 ~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (420)
+|+|+||+|++|++.... ..+.++||++|++|+|||||+|+|+...... .. ..
T Consensus 1 ~i~i~~g~I~~i~~~~~~-----~~~~~~id~~g~~v~PG~iD~H~H~~~~g~~--------------------~~-~~- 53 (338)
T cd01307 1 DVAIENGKIAAVGAALAA-----PAATQIVDAGGCYVSPGWIDLHVHVYQGGTR--------------------YG-DR- 53 (338)
T ss_pred CEEEECCEEEEccCCCCC-----CCCCeEEECCCCEEecCeEEeeecCCCCCcc--------------------cC-CC-
Confidence 589999999999985321 1247899999999999999999999542110 00 00
Q ss_pred HHHHHHHHHHHHHHhCCcceeeeCCccC---HHHHHHHH-HHhCCe--eEeeehhccCCCCCCcccccCChhHHHHHHHH
Q 014702 122 DSYISTLLCGIELIHSGVTCFAEAGGQH---VSEMAKAV-ELLGLR--ACLVQSTMDCGEGLPASWAVRTTDDCIQSQKE 195 (420)
Q Consensus 122 ~~~~~~~~~~~~~~~~Gvtt~~~~~~~~---~~~~~~~~-~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (420)
..+.++.+|+||+++++... .....+.. ...+.+ .+..... .+...+..+.. ......+...+
T Consensus 54 --------~~~~a~~~GvTtvvd~~~~~~~~~~~~~~~~~~~~~~~v~a~~~~~~--~g~~~~~~~~~-~~~~~~~~l~~ 122 (338)
T cd01307 54 --------PDMIGVKSGVTTVVDAGSAGADNIDGFRYTVIERSATRVYAFLNISR--VGLVAQDELPD-PDNIDEDAVVA 122 (338)
T ss_pred --------HhHHHHcCceeEEEeCCCCCCCCHHHHHHHHHHhhhceEEEEEeeec--cccccccccCC-hhHCCHHHHHH
Confidence 22457899999999987432 22212222 234443 2222111 11111111110 11111222333
Q ss_pred HHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCChHHHHHHhccCCC
Q 014702 196 LYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQN 275 (420)
Q Consensus 196 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 275 (420)
.+.+... +-..++..+............+++..+++++.++++.+|+.+.....+.. +.. +..
T Consensus 123 ~~~e~~~-gi~gik~~~~~~~~~~~~~~~l~~~~~~a~~~~~pi~vH~~~~~~~~~~~-------------~~~---l~~ 185 (338)
T cd01307 123 AAREYPD-VIVGLKARASKSVVGEWGIKPLELAKKIAKEADLPLMVHIGSPPPILDEV-------------VPL---LRR 185 (338)
T ss_pred HHHHCcC-cEEEEEEEeecccccccCCcHHHHHHHHHHHcCCCEEEEeCCCCCCHHHH-------------HHH---hcC
Confidence 3322221 11223433332222222333478888999999999999998765433222 211 122
Q ss_pred ccceeeccCCCh-----------hhHHHHHhcCCeEEECccchhhccCcccHHHHHHcCC-cEEEccCCCCCCC----CC
Q 014702 276 NLLSAHTVWVNH-----------TEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHADI-CVSLGTDGAPSNN----RM 339 (420)
Q Consensus 276 ~~~~~h~~~~~~-----------~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~gv-~~~lgsD~~~~~~----~~ 339 (420)
...+.|+..-+. +.+..+.++|+.+.+..... .....+.+++.++|+ ...+++|.+..+. ..
T Consensus 186 g~~~~H~~~g~~~~~~~~~~~~~~~~~~~~~~G~~~d~~~G~~--~~~~~~~~~l~~~G~~~~~lstD~~~~~~~~~p~~ 263 (338)
T cd01307 186 GDVLTHCFNGKPNGIVDEEGEVLPLVRRARERGVIFDVGHGTA--SFSFRVARAAIAAGLLPDTISSDIHGRNRTNGPVY 263 (338)
T ss_pred CCEEEeccCCCCCCCCCCCCcHHHHHHHHHhCCEEEEeCCCCC--chhHHHHHHHHHCCCCCeeecCCccccCCCCCccc
Confidence 245678776543 56777888898876552110 011134667888996 5679999854211 11
Q ss_pred CHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEcCCCCC
Q 014702 340 SIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWP 411 (420)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~ 411 (420)
.+...++.. . ..+++.+++++++|.|||+++++ +++|+|++|+.|||+|++.+..+
T Consensus 264 ~l~~~l~~l--~-------------~~gi~~ee~~~~~T~NpA~~lgl-~~~G~l~~G~~ad~~v~~~~~~~ 319 (338)
T cd01307 264 ALATTLSKL--L-------------ALGMPLEEVIEAVTANPARMLGL-AEIGTLAVGYDADLTVFDLKDGR 319 (338)
T ss_pred cHHHHHHHH--H-------------HcCCCHHHHHHHHHHHHHHHcCC-CCCCccCCCCcCCEEEEeCCCCC
Confidence 122222221 1 12599999999999999999999 45899999999999999987544
No 85
>PRK11170 nagA N-acetylglucosamine-6-phosphate deacetylase; Provisional
Probab=99.94 E-value=1.4e-25 Score=206.47 Aligned_cols=336 Identities=16% Similarity=0.117 Sum_probs=190.9
Q ss_pred EEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhcccCCC
Q 014702 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (420)
Q Consensus 21 ~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~~~~ 100 (420)
++|+|++|++.+ .++.+++|+|+||+|++|++....+ .+.++||++|++|+|||||+|+|.....
T Consensus 2 ~~i~n~~i~~~~---~~~~~~~v~IedgkI~~I~~~~~~~-----~~~~~ID~~G~~l~PG~ID~HvHG~~g~------- 66 (382)
T PRK11170 2 YALTNGRIYTGH---EVLDDHAVVIADGLIEAVCPVAELP-----PGIEQRDLNGAILSPGFIDLQLNGCGGV------- 66 (382)
T ss_pred EEEEeeEEECCC---CeEeCCEEEEECCEEEEecCCccCC-----CCCeEEeCCCCEEccceeeeeecCccCc-------
Confidence 678999999543 4667789999999999998753321 2458999999999999999999974310
Q ss_pred CChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCccCH-HH---HHHHHHH-hCCeeEeeehhccCCC
Q 014702 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHV-SE---MAKAVEL-LGLRACLVQSTMDCGE 175 (420)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~~~-~~---~~~~~~~-~g~~~~~~~~~~~~~~ 175 (420)
.+........ ........+.+++.|||+++++..... .. ..+...+ ........+.+.-+++
T Consensus 67 ----------~~~~~~~~~~---~~~l~~~~~~~~~~GvTt~lpT~it~~~~~~~~~l~~~~~~~~~~~a~~~G~HlEGP 133 (382)
T PRK11170 67 ----------QFNDTAEAIS---VETLEIMQKANEKSGCTSFLPTLITSSDELMKQAVRVMREYLAKHPNQALGLHLEGP 133 (382)
T ss_pred ----------ccccCccCCC---HHHHHHHHHHHHhcCEeEEeeeccCCCHHHHHHHHHHHHHHHhcCCCeEEEEEeecC
Confidence 0000000011 112223445688999999998653222 11 1122211 1111222345556788
Q ss_pred CCCcccccCChhHHHHH-HHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHcCCccceeccCCcchhHHH-
Q 014702 176 GLPASWAVRTTDDCIQS-QKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVV- 253 (420)
Q Consensus 176 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~- 253 (420)
+++......+...++.. ..+.++.+.... +.++. +.+..... . .++++.+.++|+.+.+-.....++....
T Consensus 134 fi~~~~~Gah~~~~~~~p~~~~~~~~~~~~-~~i~~-iTlAPE~~-~----~~~i~~l~~~gi~vs~GHs~A~~~~~~~a 206 (382)
T PRK11170 134 YLNLVKKGTHNPEFIRKPDAEMVDFLCENA-DVITK-VTLAPEMV-D----AEVIRKLVEAGIVVSAGHSNATYEEAKAG 206 (382)
T ss_pred CCCcccCCCCCHHHhcCcCHHHHHHHHhcc-CCEEE-EEECCCCC-c----HHHHHHHHHCCcEEEeeCCcCCHHHHHHH
Confidence 88888777777777652 234455554443 34554 33322211 1 2566778888888776444332222111
Q ss_pred Hh---------------hcCCCCChHHHHHHhccCCCccceeeccCCChhhHHHHHhcC---CeEEECccchhhc-cCcc
Q 014702 254 MD---------------TRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAG---VKVSHCPASAMRM-LGFA 314 (420)
Q Consensus 254 ~~---------------~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~---~~~~~~p~~~~~~-~~~~ 314 (420)
.+ ++....+.+...-....+ .-.++..+.|+.++.++.+.+.. +.+++........ .+.+
T Consensus 207 ~~~Ga~~~THlfNaM~~~~hR~pg~vga~l~~~~~-~~elI~Dg~Hv~p~~~~~~~~~k~~~~~lvtDa~~~~G~~~g~y 285 (382)
T PRK11170 207 FRAGITFATHLYNAMPYITGREPGLVGAILDEPDV-YCGIIADGLHVDYANIRNAKRLKGDKLCLVTDATAPAGANIEQF 285 (382)
T ss_pred HHcCCCEEeeccccCCcccCCCcchhhHhhcCCCc-EEEEEcCcccCCHHHHHHHHHhcCCcEEEEeccccCCCCCCCeE
Confidence 11 111122222211111100 11357789999999887765543 2233222211111 1111
Q ss_pred cHH---HHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcc
Q 014702 315 PIK---EMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDI 391 (420)
Q Consensus 315 ~~~---~~~~~gv~~~lgsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~ 391 (420)
.+. -.++.|. ..+ .|+.-.+...++.+.++.+... .+++++++++++|.|||+.+|+++++
T Consensus 286 ~l~~~~v~v~~g~-~~~-~~G~LAGs~l~l~~~v~~l~~~--------------~~~~~~eal~~aT~npA~~lgl~~~~ 349 (382)
T PRK11170 286 IFAGKTIYYRDGL-CVD-ENGTLSGSALTMIEAVRNLVEH--------------VGIALDEALRMATLYPARAIGVDKRL 349 (382)
T ss_pred EECCEEEEEECCE-EEC-CCCcccccHhHHHHHHHHHHHh--------------cCCCHHHHHHHHHHHHHHHhCCCCCc
Confidence 111 0112221 111 3443344555677777765432 25999999999999999999998778
Q ss_pred cccccCccccEEEEcCC
Q 014702 392 GSLEAGKKADMVVVDPF 408 (420)
Q Consensus 392 G~l~~G~~ADlvv~d~~ 408 (420)
|+|++|+.|||+|||.+
T Consensus 350 G~i~~G~~ADlvvld~~ 366 (382)
T PRK11170 350 GSIEAGKVANLTAFTRD 366 (382)
T ss_pred cccCCCCcCCEEEECCC
Confidence 99999999999999976
No 86
>cd01308 Isoaspartyl-dipeptidase Isoaspartyl dipeptidase hydrolyzes the beta-L-isoaspartyl linkages in dipeptides, as part of the degradative pathway to eliminate proteins with beta-L-isoaspartyl peptide bonds, bonds whereby the beta-group of an aspartate forms the peptide link with the amino group of the following amino acid. Formation of this bond is a spontaneous nonenzymatic reaction in nature and can profoundly effect the function of the protein. Isoaspartyl dipeptidase is an octameric enzyme that contains a binuclear zinc center in the active site of each subunit and shows a strong preference of hydrolyzing Asp-Leu dipeptides.
Probab=99.94 E-value=1.3e-24 Score=203.84 Aligned_cols=318 Identities=20% Similarity=0.276 Sum_probs=177.1
Q ss_pred EEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhcccCCC
Q 014702 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (420)
Q Consensus 21 ~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~~~~ 100 (420)
++|+|++|++++. ..+++|+|+||+|++|++....+ ...+.++||++|++|+|||||+|+|+.......
T Consensus 2 ~~i~~~~v~~~~~----~~~~~v~i~~g~I~~v~~~~~~~---~~~~~~~id~~g~~v~PG~id~H~H~~~~~~~~---- 70 (387)
T cd01308 2 TLIKNAEVYAPEY----LGKKDILIAGGKILAIEDQLNLP---GYENVTVVDLHGKILVPGFIDQHVHIIGGGGEG---- 70 (387)
T ss_pred EEEECcEEeCCCC----ccceEEEEECCEEEEEeCCcccc---cCCCCeEEECCCCEEccCeeehhhCcccccCCC----
Confidence 5799999997542 35789999999999999865332 113568999999999999999999995310000
Q ss_pred CChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCc-----cCHH---HHHHHHHHhCCeeEeeehhcc
Q 014702 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-----QHVS---EMAKAVELLGLRACLVQSTMD 172 (420)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~-----~~~~---~~~~~~~~~g~~~~~~~~~~~ 172 (420)
. ....++. ....+++.+|+||++++.+ .... ...+.....|++.+.....++
T Consensus 71 -~------------~~~~~~~-------~~~~~~~~~G~tt~~d~~~~~~~~~~~~~~~~~~~~~~~~Gv~~v~~~~~~~ 130 (387)
T cd01308 71 -G------------PSTRTPE-------VTLSDLTTAGVTTVVGCLGTDGISRSMEDLLAKARALEEEGITCFVYTGSYE 130 (387)
T ss_pred -c------------ccccCHH-------HHHHHHHhCCceEEecCcCCCCCCCCHHHHHHHHHHHHHhCCEEEEEecccC
Confidence 0 0011111 1345678999999999762 1222 345556778999987655433
Q ss_pred CCCCCCcccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHcCC------ccceeccCC
Q 014702 173 CGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKT------GIHMHVAEI 246 (420)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~------~v~~h~~~~ 246 (420)
.. .. ............++.+.. .+.+. .............+.++.+.++..+. .+++|....
T Consensus 131 ~~----~~----~~~~~~~~~~~~i~~~~~--~g~~~--~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vh~~~~ 198 (387)
T cd01308 131 VP----TR----TITGSIRKDLLLIDKVIG--VGEIA--ISDHRSSQPTVEELARIAAEARVGGLLGGKAGIVHIHLGDG 198 (387)
T ss_pred CC----Cc----CchhhHHHHHHHHHHhcC--cceEE--EcCCCCCCCCHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCc
Confidence 21 11 111112211223444332 12111 12222223455566666666654332 366667644
Q ss_pred cchhHHHHhhcCCCCChHHHHHHhccCCC-ccceeeccCCChhh---HHHHHhcCCeEEEC----ccchhhc--cCcccH
Q 014702 247 PYENQVVMDTRKVDHGTVTFLDKIEFLQN-NLLSAHTVWVNHTE---IGLLSRAGVKVSHC----PASAMRM--LGFAPI 316 (420)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~h~~~~~~~~---~~~~~~~~~~~~~~----p~~~~~~--~~~~~~ 316 (420)
....+.. .+++...+. .. +.+..|.. .+.+. .....+.|..+.+. |...... .....+
T Consensus 199 ~~~~~~i----------~~~~~~~G~-~~~~~~~~~~~-~~~~~~~~~~~~~~~G~~v~i~~~~~~~~~~~~~~~~~~~l 266 (387)
T cd01308 199 KRALSPI----------FELIEETEI-PITQFLPTHIN-RTAPLFEQGVEFAKMGGTIDLTSSIDPQFRKEGEVRPSEAL 266 (387)
T ss_pred hHHHHHH----------HHHHHhcCC-CcceeECCccc-CCHHHHHHHHHHHHcCCcEEEECCCCccccccCccChHHHH
Confidence 2211111 111222222 11 23333333 45442 22334456543332 2111000 112345
Q ss_pred HHHHHcCC---cEEEccCCCCC---CC--------CC----CHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHh
Q 014702 317 KEMLHADI---CVSLGTDGAPS---NN--------RM----SIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMAT 378 (420)
Q Consensus 317 ~~~~~~gv---~~~lgsD~~~~---~~--------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T 378 (420)
+.+++.|+ .++++||+... .. .. .++..+... +. ..++|++++++++|
T Consensus 267 ~~~~~~g~~~d~i~l~TD~~~~~p~~~~~g~~~~~g~~~~~~~~~~~~~~--v~------------~~~i~~~~al~~~T 332 (387)
T cd01308 267 KRLLEQGVPLERITFSSDGNGSLPKFDENGNLVGLGVGSVDTLLREVREA--VK------------CGDIPLEVALRVIT 332 (387)
T ss_pred HHHHHhCCCCCcEEEEECCCCCcccCccCCeEEecCcCcHHHHHHHHHHH--HH------------hCCCCHHHHHHHHH
Confidence 67778885 37999997421 00 00 111222211 11 12499999999999
Q ss_pred HHHHHHccCCCcccccccCccccEEEEcCC
Q 014702 379 INGAKSVLWDNDIGSLEAGKKADMVVVDPF 408 (420)
Q Consensus 379 ~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~ 408 (420)
.|||+++|+++ +|+|++|++|||+|||++
T Consensus 333 ~npA~~lg~~~-~G~i~~G~~ADlvv~d~~ 361 (387)
T cd01308 333 SNVARILKLRK-KGEIQPGFDADLVILDKD 361 (387)
T ss_pred HHHHHHhCCCC-CCCcCCCCcCCEEEEcCC
Confidence 99999999975 799999999999999987
No 87
>TIGR00857 pyrC_multi dihydroorotase, multifunctional complex type. All proteins described by this model should represent active and inactive dihydroorotase per se and functionally equivalent domains of multifunctional proteins from higher eukaryotes, but exclude related proteins such as allantoinase.
Probab=99.94 E-value=7.9e-26 Score=212.54 Aligned_cols=315 Identities=19% Similarity=0.177 Sum_probs=172.0
Q ss_pred eeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhcccCCCCChHHHhhhccccccCC
Q 014702 38 FRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESN 117 (420)
Q Consensus 38 ~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (420)
+..++|+|+||+|++|++.. . + .+.++||++|++|+|||||+|+|+.. ..
T Consensus 3 ~~~~~v~I~~g~I~~i~~~~-~----~-~~~~~ida~g~~v~PG~ID~H~H~~~------------------------~~ 52 (411)
T TIGR00857 3 ETEVDILVEGGRIKKIGKLR-I----P-PDAEVIDAKGLLVLPGFIDLHVHLRD------------------------PG 52 (411)
T ss_pred eEEEEEEEECCEEEEeeccC-C----C-CCCeEEECCCCEEecCEEEcccCCCC------------------------CC
Confidence 34579999999999997521 1 1 25579999999999999999999931 00
Q ss_pred CChHHHHHHHHHHHHHHHhCCcceeeeCCccC-----HHHHHHHHHHhCCeeEeeehhccCCCCCCcccccCChhHHHHH
Q 014702 118 MTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-----VSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQS 192 (420)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (420)
.... .......+.++.+|||+++++.... ............-.....+.... +.... .......+
T Consensus 53 ~~~~---~~~~~~~~~~~~~GvTtv~~~~~t~p~~~~~~~l~~~~~~~~~~~~vd~~~~~---~~~~~----~~~~~l~e 122 (411)
T TIGR00857 53 EEYK---EDIESGSKAAAHGGFTTVADMPNTKPPIDTPETLEWKLQRLKKVSLVDVHLYG---GVTQG----NQGKELTE 122 (411)
T ss_pred CccH---hHHHHHHHHHHhCCeEEEEEecCCCCCCCcHHHHHHHHHHhccCCcccEEEEE---EEecC----CccccHHH
Confidence 0111 1122244578899999999975321 12221111211111111111000 00000 00001222
Q ss_pred HHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhh------cCCCCChH--
Q 014702 193 QKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDT------RKVDHGTV-- 264 (420)
Q Consensus 193 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~------~~~~~~~~-- 264 (420)
...++ .. +.+...+.....+..+...+.++++.++++++++.+|+.+........... ......+.
T Consensus 123 ~~~l~----~~--Gv~g~~f~~~~~~~~~~~~l~~~~~~a~~~g~~v~iH~E~~~l~~~~~~~~g~~~~~~~~~~~p~~a 196 (411)
T TIGR00857 123 AYELK----EA--GAVGRMFTDDGSEVQDILSMRRALEYAAIAGVPIALHAEDPDLIYGGVMHEGPSAAQLGLPARPPEA 196 (411)
T ss_pred HHHHH----HC--CcEEEEEEeCCcccCCHHHHHHHHHHHHHcCCEEEEecCCHHHHhhhhhcCCcccHhhCCCCCCHHH
Confidence 22221 11 233211222222345778899999999999999999997754322111000 00000111
Q ss_pred ------HHHHHhccCCCccceeeccCCChhh---HHHHHhcC--CeEEECccchhhc-----------cCccc-------
Q 014702 265 ------TFLDKIEFLQNNLLSAHTVWVNHTE---IGLLSRAG--VKVSHCPASAMRM-----------LGFAP------- 315 (420)
Q Consensus 265 ------~~l~~~~~~~~~~~~~h~~~~~~~~---~~~~~~~~--~~~~~~p~~~~~~-----------~~~~~------- 315 (420)
.++......+.+..+.|... .+. +...++.| +.+.+||.+.... ...+|
T Consensus 197 E~~ai~~~~~la~~~~~~~~i~Hvs~--~~~l~~i~~a~~~g~~v~~ev~ph~L~~~~~~~~~~~~~~k~~Pplr~~~~~ 274 (411)
T TIGR00857 197 EEVAVARLLELAKHAGCPVHICHIST--KESLELIVKAKSQGIKITAEVTPHHLLLSEEDVARLDGNGKVNPPLREKEDR 274 (411)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEeCCC--HHHHHHHHHHHHcCCcEEEeechhhheecHHHHhCCCccEEEcCCCCCHHHH
Confidence 11222222333444444432 333 44445555 5567888653110 11233
Q ss_pred --HHHHHHcCCcEEEccCCCCCCC------------CCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHH
Q 014702 316 --IKEMLHADICVSLGTDGAPSNN------------RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATING 381 (420)
Q Consensus 316 --~~~~~~~gv~~~lgsD~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~ 381 (420)
+.+.+++|+..+++|||.|+.. ++.-.+. ....++... ...+++++++++++|.||
T Consensus 275 ~~L~~~l~~g~i~~i~sDh~p~~~~~k~~~~~~~~~G~~g~e~-~~~~~~~~~---------~~~~~~~~~~~~~~t~~p 344 (411)
T TIGR00857 275 LALIEGLKDGIIDIIATDHAPHTLEEKTKEFAAAPPGIPGLET-ALPLLLQLL---------VKGLISLKDLIRMLSINP 344 (411)
T ss_pred HHHHHHHhcCCCcEEEcCCCCCChHHccCCHhhCCCCceeHHH-HHHHHHHHH---------HhCCCCHHHHHHHHhHHH
Confidence 4567788999999999998631 1111111 111111110 112599999999999999
Q ss_pred HHHccCCCcccccccCccccEEEEcCCCCC
Q 014702 382 AKSVLWDNDIGSLEAGKKADMVVVDPFSWP 411 (420)
Q Consensus 382 A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~ 411 (420)
|+++|++++ |+|++|+.|||++||.+..+
T Consensus 345 a~~~g~~~~-G~l~~G~~ADlvi~d~~~~~ 373 (411)
T TIGR00857 345 ARIFGLPDK-GTLEEGNPADITVFDLKKEW 373 (411)
T ss_pred HHHhCCCCC-CccCCCCcCCEEEEcCCCCE
Confidence 999999654 99999999999999988643
No 88
>COG1001 AdeC Adenine deaminase [Nucleotide transport and metabolism]
Probab=99.94 E-value=8.1e-25 Score=201.37 Aligned_cols=306 Identities=19% Similarity=0.283 Sum_probs=186.4
Q ss_pred CCCceEEEEecEEEeecCCceeeeceeEEEECCEEEEE-cCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhh
Q 014702 16 GSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAI-GQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLA 94 (420)
Q Consensus 16 ~~~~~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~v-g~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~ 94 (420)
.+.+|++++||+|++.- ...+..++|.|.+|+|+.| ++.. .++.++||+.|++|.|||||.|+|+
T Consensus 21 ~~~adlv~~ng~ivdv~--~gei~~~dIaI~~grI~~v~~~~~-------~e~~~~iDa~g~yivPGfID~H~HI----- 86 (584)
T COG1001 21 RAKADLVLKNGRIVDVV--TGEIYKGDIAIAGGRIVGVIGEYR-------AEATEVIDAAGRYIVPGFIDAHLHI----- 86 (584)
T ss_pred CCCCCEEEECCEEEEee--eccEEeeeEEEECCEEEEeecCcC-------cccceeecCCCCEeccceeecceec-----
Confidence 34689999999999543 5566788999999999995 4432 1588999999999999999999999
Q ss_pred cccCCCCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeC--------CccCHHHHHHHHHHhCCeeEe
Q 014702 95 KGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEA--------GGQHVSEMAKAVELLGLRACL 166 (420)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~--------~~~~~~~~~~~~~~~g~~~~~ 166 (420)
++.+..+..|+.+ .+++|+||++.- |-.....+.+.++...++.+.
T Consensus 87 --------------------ESSm~tP~~FA~~------Vlp~GtTtvV~DPHEIaNV~G~~Gi~~ml~~a~~~pl~~~~ 140 (584)
T COG1001 87 --------------------ESSMLTPSEFARA------VLPHGTTTVVSDPHEIANVLGEDGIRFMLDEAKETPLKVYV 140 (584)
T ss_pred --------------------cccccCHHHHHHH------hhccCceEEeeCcHHHHhhccHHHHHHHHHHHhhCCeEEEE
Confidence 6666666666654 569999998752 222344556677777777765
Q ss_pred eehhccCCCCCCcccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHcCCccceeccCC
Q 014702 167 VQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEI 246 (420)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~ 246 (420)
.....-... + +......-..+...+++++ ... ..+.-++.+.+.-..+++.+. .++.+++.+.+|.-|+-..
T Consensus 141 ~~pScVPat--~--~Et~Ga~l~a~~i~e~~~~-p~V--igl~E~Mn~pgVi~~D~~~l~-kl~a~~~~~k~VdGHapgl 212 (584)
T COG1001 141 MLPSCVPAT--P--FETSGAELTAEDIKELLEH-PEV--IGLGEMMNFPGVIEGDPDMLA-KLEAARKAGKPVDGHAPGL 212 (584)
T ss_pred ecccCccCC--c--cccCCceecHHHHHHHhhC-CCc--cchhhhcCCchhccCCHHHHH-HHHHHHHcCCeecccCCCC
Confidence 433321111 1 1110111111222332221 110 111112333344444555554 4556889999999999664
Q ss_pred cchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCCChhh-HHHHHhcCCeEEECccchhhccCcc-cHHHHHHcC-
Q 014702 247 PYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTE-IGLLSRAGVKVSHCPASAMRMLGFA-PIKEMLHAD- 323 (420)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~-~~~~~~~~g- 323 (420)
.... +..+...+. ...|-.. +.|+ ++++ +.|..+.+--.+..+. +. .++.+-+.|
T Consensus 213 ~g~~-------------Ln~Y~aaGi-----~tDHE~~-t~EEa~~kl-r~Gm~i~iReGS~a~d--l~~l~~~i~e~~~ 270 (584)
T COG1001 213 SGKE-------------LNAYIAAGI-----STDHEST-TAEEALEKL-RLGMKIMIREGSAAKD--LAALLPAITELGS 270 (584)
T ss_pred ChHH-------------HHHHHhcCC-----CcCcccC-CHHHHHHHH-hCCcEEEEEcCchhhh--HHHHHHHHhhcCC
Confidence 3211 111222222 1235444 5555 4555 5888877653333211 11 122233445
Q ss_pred CcEEEccCCCCCCC---CCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCccc
Q 014702 324 ICVSLGTDGAPSNN---RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKA 400 (420)
Q Consensus 324 v~~~lgsD~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~A 400 (420)
-.+++.||...... ...+-.-++.+. +.|+++.+|++|+|.|||+.+|+++ +|.|+||+.|
T Consensus 271 ~~~~lcTDD~~p~dl~~eGhld~~vR~Ai---------------~~Gv~p~~a~qmAtiN~A~~~gl~~-~G~iAPG~~A 334 (584)
T COG1001 271 RRVMLCTDDRHPDDLLEEGHLDRLVRRAI---------------EEGVDPLDAYQMATINPAEHYGLDD-LGLIAPGRRA 334 (584)
T ss_pred ceEEEECCCCChhHhhhcCCHHHHHHHHH---------------HcCCCHHHHHHHHhcCHHHHcCCcc-cccccCCccc
Confidence 45889999754210 011222233331 2469999999999999999999987 8999999999
Q ss_pred cEEEEcC
Q 014702 401 DMVVVDP 407 (420)
Q Consensus 401 Dlvv~d~ 407 (420)
|||+++.
T Consensus 335 Dlvi~~D 341 (584)
T COG1001 335 DLVILED 341 (584)
T ss_pred cEEEEcc
Confidence 9999973
No 89
>PRK01211 dihydroorotase; Provisional
Probab=99.93 E-value=6.4e-25 Score=203.81 Aligned_cols=298 Identities=14% Similarity=0.098 Sum_probs=162.8
Q ss_pred eeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhcccCCCCChHHHhhhccccccCC
Q 014702 38 FRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESN 117 (420)
Q Consensus 38 ~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (420)
...++|+|+||||++|++.. .+.++||++| +|+|||||+|+|+.. +.
T Consensus 13 ~~~~di~I~dGkI~~i~~~~--------~~~~~ida~g-~vlPG~ID~HvH~r~------------------------pg 59 (409)
T PRK01211 13 FDYLEIEVEDGKIKSIKKDA--------GNIGKKELKG-AILPAATDIHVHFRT------------------------PG 59 (409)
T ss_pred EEEEEEEEECCEEEEecCCC--------CCceEEEecc-EEcCCeEEeeeccCC------------------------CC
Confidence 45679999999999998643 2568999999 999999999999932 11
Q ss_pred CChHHHHHHHHHHHHHHHhCCcceeeeCCcc----CHHHHHHH-HHHhCCeeEeeehhccCCCCCCcccccCChhHHHHH
Q 014702 118 MTEEDSYISTLLCGIELIHSGVTCFAEAGGQ----HVSEMAKA-VELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQS 192 (420)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~----~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (420)
....+.+.. ..++++.+|||++++|+.. ...+.... .....-.....+.+.... .+ . ..
T Consensus 60 ~~~ked~~s---~s~AAaaGGvTtv~dmPnt~P~~~~~e~~~~~~~~a~~~s~vd~~~~~~~--~~--~----~~----- 123 (409)
T PRK01211 60 ETEKEDFST---GTLSAIFGGTTFIMDMPNNNIPIKDYNAFSDKLGRVAPKAYVDFSLYSME--TG--N----NA----- 123 (409)
T ss_pred CcccCcHHH---HHHHHHcCCcEEEEECCCCCCCCChHHHHHHHHHHhccCceeeEEEEecc--CC--c----hh-----
Confidence 121122222 4567889999999998742 22222222 222222222222221111 00 0 00
Q ss_pred HHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHh----hcCCCCCh-----
Q 014702 193 QKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMD----TRKVDHGT----- 263 (420)
Q Consensus 193 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~----~~~~~~~~----- 263 (420)
+.. . .+...++++...... ..........++.+.+.+..+.+|+............ .......+
T Consensus 124 --~~~-~---~g~~~~k~f~~~~~~-~~~~~~~~~~l~~~~~~g~~v~~H~E~~~l~~~~~~~~~~~~~~~~~rP~~aE~ 196 (409)
T PRK01211 124 --LIL-D---ERSIGLKVYMGGTTN-TNGTDIEGGEIKKINEANIPVFFHAELSECLRKHQFESKNLRDHDLARPIECEI 196 (409)
T ss_pred --hHH-h---ccCcEEEEEcCCCcC-CCccccCHHHHHHHHccCCEEEEeccChHHhhhhhhCcchHhhCCCCCCHHHHH
Confidence 111 1 122334443321100 0000112234456678899999999765432210000 00111111
Q ss_pred HHHHHHhccCCCccceeeccCCCh-hhHHHHHhcCCeEEECccchhhc---------cCcccHH---------HHHHcCC
Q 014702 264 VTFLDKIEFLQNNLLSAHTVWVNH-TEIGLLSRAGVKVSHCPASAMRM---------LGFAPIK---------EMLHADI 324 (420)
Q Consensus 264 ~~~l~~~~~~~~~~~~~h~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~---------~~~~~~~---------~~~~~gv 324 (420)
..+.....+...+ .|..|++- +.+ ..+++.+||.+.... .-.+|++ +.+.+|.
T Consensus 197 ~ai~~~~~la~~~---~hi~HvSt~~~~-----~~vt~Ev~phhL~l~~~~~~~~~~kvnPPLRs~~d~~aL~~~l~dG~ 268 (409)
T PRK01211 197 KAVKYVKNLDLKT---KIIAHVSSIDVI-----GRFLREVTPHHLLLNDDMPLGSYGKVNPPLRDRWTQERLLEEYISGR 268 (409)
T ss_pred HHHHHHHHHhCCC---cEEEEecChhhc-----CceEEEecHHHHccccccccCCceeEcCCCCCHHHHHHHHHHHhCCC
Confidence 1112222222222 34444443 223 256777888654211 1123443 4567899
Q ss_pred cEEEccCCCCCCC-----------CCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccc
Q 014702 325 CVSLGTDGAPSNN-----------RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGS 393 (420)
Q Consensus 325 ~~~lgsD~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~ 393 (420)
..+++|||.|+.. ++.-++.+... ++.. ....++|++++++++|.||||++|+ + +|+
T Consensus 269 ID~i~SDHaP~~~~eK~~~~~a~~G~~gle~~lpl-~~~~---------v~~~~isl~~~v~~~s~nPAki~gl-~-kG~ 336 (409)
T PRK01211 269 FDILSSDHAPHTEEDKQEFEYAKSGIIGVETRVPL-FLAL---------VKKKILPLDVLYKTAIERPASLFGI-K-KGK 336 (409)
T ss_pred CCEEeCCCCCCChhHhCCHhhCCCCCCcHHHHHHH-HHHH---------HHcCCCCHHHHHHHHHHHHHHHhCC-C-CCc
Confidence 9999999998631 22222222111 1110 0123599999999999999999999 3 699
Q ss_pred cccCccccEEEEcCCCCC
Q 014702 394 LEAGKKADMVVVDPFSWP 411 (420)
Q Consensus 394 l~~G~~ADlvv~d~~~~~ 411 (420)
|++|++|||||||++..+
T Consensus 337 l~~G~~ADlvi~D~~~~~ 354 (409)
T PRK01211 337 IEEGYDADFMAFDFTNIK 354 (409)
T ss_pred ccCCCcCCEEEEcCCCeE
Confidence 999999999999988543
No 90
>PRK10027 cryptic adenine deaminase; Provisional
Probab=99.93 E-value=1.1e-23 Score=201.95 Aligned_cols=307 Identities=16% Similarity=0.167 Sum_probs=177.5
Q ss_pred CCceEEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhcc
Q 014702 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (420)
Q Consensus 17 ~~~~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~ 96 (420)
.+.+++|+|++|+++. ......++|+|++|+|++|++..... .+.++||++|++|+|||||+|+|+..
T Consensus 28 ~~~dllI~ng~vv~~~--~~~~~~~~V~I~~GrI~~Vg~~~~~~-----~~~~vIDa~G~~v~PGlIDaHvHies----- 95 (588)
T PRK10027 28 AVADYIIDNVSILDLI--NGGEISGPIVIKGRYIAGVGAEYADA-----PALQRIDARGATAVPGFIDAHLHIES----- 95 (588)
T ss_pred CCCCEEEECcEEEeCC--CCcEEeeEEEEECCEEEEeCCCCCCC-----CCCeEEECCCCEEEECeEeccccCCc-----
Confidence 4578999999999643 22345689999999999997642210 24689999999999999999999932
Q ss_pred cCCCCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCc--------cCHHHHHHHHHHhCCeeEeee
Q 014702 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG--------QHVSEMAKAVELLGLRACLVQ 168 (420)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~--------~~~~~~~~~~~~~g~~~~~~~ 168 (420)
.+.....+. ..++++|+||+++.+. .......+.+...++..+...
T Consensus 96 --------------------s~~~p~~~a------~aal~~G~TtVv~dPhei~nv~g~~gi~~~l~~a~~~p~~~~~~~ 149 (588)
T PRK10027 96 --------------------SMMTPVTFE------TATLPRGLTTVICDPHEIVNVMGEAGFAWFARCAEQARQNQYLQV 149 (588)
T ss_pred --------------------ccCCHhHHH------HHHHhCceEEEEcCCCCcccCCCHHHHHHHHHHhhhCCCeeEEee
Confidence 122222232 2478999999998432 123445556666676655432
Q ss_pred hhccCCCCCCcccccCChhHHHHHHHHHHHHhcCCCCCceEE--EEeeccccccCHHHHHHHHHHHHHcCCccceeccCC
Q 014702 169 STMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRI--WFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEI 246 (420)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~ 246 (420)
.. +.+..+ .+......-..++..++++. ...+++ .+.+.+.....++.+.++.. + .+..+.-|+-.-
T Consensus 150 ps--~vpa~~-~~Et~Ga~~~~~~~~~~l~~-----~~v~glgEvMn~~~V~~~d~~~~~ki~~-~--~~~~idGH~p~l 218 (588)
T PRK10027 150 SS--CVPALE-GCDVNGASFTLEQMLAWRDH-----PQVTGLAEMMDYPGVISGQNALLDKLDA-F--RHLTLDGHCPGL 218 (588)
T ss_pred cc--cCcCCc-ccccCCCcCCHHHHHHHhcC-----CCceeEEeccCccccccCCHHHHHHHHH-h--CCCceECCCCCC
Confidence 22 111111 01111111112233333321 122222 22334444456777777663 3 788888888543
Q ss_pred cchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCCChhhHHHHHhcCCeEEECccchhhccCcccHHHHHHc--CC
Q 014702 247 PYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHA--DI 324 (420)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~--gv 324 (420)
... .+..+...+. ...|-.. +.++...-.++|..+.+...+..+ ....+..++.. --
T Consensus 219 ~g~-------------~L~ay~aaGi-----~sDHE~~-t~eea~eklr~Gm~v~iRegS~~~--nl~~l~~~~~~~~~~ 277 (588)
T PRK10027 219 GGK-------------ELNAYIAAGI-----ENCHESY-QLEEGRRKLQLGMSLMIREGSAAR--NLNALAPLINEFNSP 277 (588)
T ss_pred ChH-------------HHHHHHHcCC-----CCCcccC-CHHHHHHHHHCCCEEEEeCCcccc--CHHHHHHHhhccCCC
Confidence 321 1112222222 1235554 555543334589888876544322 11122222221 13
Q ss_pred cEEEccCCCCCCC---CCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCcccc
Q 014702 325 CVSLGTDGAPSNN---RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKAD 401 (420)
Q Consensus 325 ~~~lgsD~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~AD 401 (420)
.+++.||...... ..-+...++.+.. ..|+++++|++++|.|||+++|+++ +|+|++|+.||
T Consensus 278 ~~~l~TDd~~~~~l~~~Ghi~~~vr~av~--------------~~Gi~~~~Ai~mAT~nPA~~lgl~d-~G~IapG~~AD 342 (588)
T PRK10027 278 QCMLCTDDRNPWEIAHEGHIDALIRRLIE--------------QHNVPLHVAYRVASWSTARHFGLNH-LGLLAPGKQAD 342 (588)
T ss_pred eEEEEcCCCChHHHHhccCHHHHHHHHHH--------------HcCCCHHHHHHHHHHHHHHHcCCCC-CcccCCCCcCC
Confidence 5789999753210 0011223333321 1369999999999999999999975 69999999999
Q ss_pred EEEEcCC
Q 014702 402 MVVVDPF 408 (420)
Q Consensus 402 lvv~d~~ 408 (420)
|+++|..
T Consensus 343 lvvld~l 349 (588)
T PRK10027 343 IVLLSDA 349 (588)
T ss_pred EEEEccC
Confidence 9999963
No 91
>PF01979 Amidohydro_1: Amidohydrolase family; InterPro: IPR006680 This group of enzymes represents a large metal dependent hydrolase superfamily []. The family includes adenine deaminase (3.5.4.2 from EC) that hydrolyses adenine to form hypoxanthine and ammonia. The adenine deaminase reaction is important for adenine utilization as a purine and also as a nitrogen source []. This family also includes dihydroorotase and N-acetylglucosamine-6-phosphate deacetylases (3.5.1.25 from EC). These enzymes catalyse the reaction: N-acetyl-D-glucosamine 6-phosphate + H2O = D-glucosamine 6-phosphate + acetateThis family includes dihydroorotase and urease which belong to MEROPS peptidase family M38 (beta-aspartyl dipeptidase, clan MJ), where they are classified as non-peptidase homologs. ; GO: 0016787 hydrolase activity; PDB: 1O12_A 2KAU_C 1FWD_C 1A5M_C 1FWC_C 1FWI_C 1EJV_C 1FWH_C 1A5L_C 1KRA_C ....
Probab=99.93 E-value=9.5e-26 Score=208.24 Aligned_cols=282 Identities=27% Similarity=0.367 Sum_probs=178.5
Q ss_pred EEeecccccccccchhhhcccCCCCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCc--cCHH---
Q 014702 77 ILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG--QHVS--- 151 (420)
Q Consensus 77 ~v~PGfID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~--~~~~--- 151 (420)
+|+|||||+|+|+.+....+. +..+..+.......++++++|||++++++. ....
T Consensus 1 ~v~PGlID~H~H~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~ 60 (333)
T PF01979_consen 1 YVMPGLIDAHVHGGQGGLRGL--------------------LDPEDHYESIRTGAKAALKGGVTTVLDTPHTSPNPDIEL 60 (333)
T ss_dssp EEEE-EEEEEEEGGGTTHTTS--------------------SSHHHHHHHHHHHHHHHHHTTEEEEEEEEESSHCHHHHH
T ss_pred CEEcChhHHhhCcCCcCcccc--------------------CCHHHHHHHHHHHHHHHHhcCeEEEEcCcccCCcccccc
Confidence 699999999999976554432 445566666777889999999999999842 2222
Q ss_pred --HHHHHHHH-hCCeeEeeehhccCCCCCCcccccCChhH--------HHHHHHHHHHHhcCCCC--CceEEEEeecccc
Q 014702 152 --EMAKAVEL-LGLRACLVQSTMDCGEGLPASWAVRTTDD--------CIQSQKELYAKHHHAAD--GRIRIWFGIRQIM 218 (420)
Q Consensus 152 --~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~ 218 (420)
...+.... ..+..... .+.....+....+....... ...+..+.+..+..... ..+..........
T Consensus 61 ~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (333)
T PF01979_consen 61 RNEIMEGLAAAPKIEPAMT-LLGTGSVGGHGEGPNEPPDKNGPHDEAFEGEDFIKFIEEAGSEIKRIDGVIPAISPHNPY 139 (333)
T ss_dssp HHHHHHHHHHHHHHEEEEE-EEEECECSEEEECHHHHHHHHSEHHHHHHHHHHHHHHHHHTTTCEEEECEEEEEEHHTTT
T ss_pred ccccccccccchhhhcccc-ccccccccccccccccccccccCCchhhhHHHHHHHhhhhhhhhcccccccccccccccc
Confidence 11111111 11111000 00000001110100000000 01122333333332211 1334446666777
Q ss_pred ccCHHHHHHHHHHHHH-----c-CCccceeccCCcchhHHHHhhcCCCCChHHHHHHhccC-----CCccceeeccCCCh
Q 014702 219 NATDRLLLETRDMARE-----F-KTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFL-----QNNLLSAHTVWVNH 287 (420)
Q Consensus 219 ~~~~~~l~~~~~~a~~-----~-~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~~~~h~~~~~~ 287 (420)
..+.+.++..++.+++ . ++++++|+.+.....+.....+ .....+.+.....+ +...++.|+.++++
T Consensus 140 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~ 217 (333)
T PF01979_consen 140 TVSDEELREAVELAKEFLAAEKLGIPVHIHVAEGTGEVEAMTHLY--GMSPIEALDHLGLLEEAIDDGVDLIAHGTHLSD 217 (333)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHTHEEEEEESSSHHHHCCCHHHH--SHHHHHHHHHHHSCHHHHHHHCEEEEEHTTSEH
T ss_pred cchhhhhhhHHhhhhhHHHHHhhcccceeeeccCcccceeEeeee--eccchhhhccchhhhhhcccccceeeccccCCH
Confidence 8888889999999888 3 9999999999876644444433 33344555555555 56678899999999
Q ss_pred hhHHHHHhcCCeEEECccchhh--------------------c-cCcccHHHHHHc-CCcEEEccCCCCCCCCCCHHHHH
Q 014702 288 TEIGLLSRAGVKVSHCPASAMR--------------------M-LGFAPIKEMLHA-DICVSLGTDGAPSNNRMSIVDEM 345 (420)
Q Consensus 288 ~~~~~~~~~~~~~~~~p~~~~~--------------------~-~~~~~~~~~~~~-gv~~~lgsD~~~~~~~~~~~~~~ 345 (420)
++++++++.+..+..||..+.. . ....+...+.++ |+. +|||+.. +++
T Consensus 218 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~--lgtDg~~--------~~l 287 (333)
T PF01979_consen 218 EEIELLKETGIGIIHCPISNDSAPHKPGKAIMMDGTAEGIYGLGSGGAPLFRMLDKMGVN--LGTDGVA--------EEL 287 (333)
T ss_dssp HHHHHHHHHTHEEEEEHHHHHHHHHHTTHHSETTBSBTSBSCTTHHHHHHHHHHHCTTHE--ETTCTTC--------HHH
T ss_pred HHhhhhhccCCccccccchhhhhccccccccccchhccccccccccccchhhhhhhcccc--ccccccc--------ccc
Confidence 9999999999999999988765 1 112345556666 877 9999321 666
Q ss_pred HHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEc
Q 014702 346 YLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVD 406 (420)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d 406 (420)
+..... +++++++++++|.|||+++|+++++|+|++||+|||||||
T Consensus 288 ~~~~~~---------------~~~~~~~l~~aT~n~Ak~lg~~~~~G~i~~G~~ADlvv~D 333 (333)
T PF01979_consen 288 KLFVRL---------------GISPEEALKMATINPAKILGLDDDKGSIEPGKDADLVVLD 333 (333)
T ss_dssp HHHHHH---------------HSHHHHHHHHHTHHHHHHTTSTTTSSSSSTTSB--EEEEE
T ss_pred cccccc---------------cccccccccccchhHHHHcCCCCCEEEeCcCCCcCEEEeC
Confidence 665433 2889999999999999999998889999999999999997
No 92
>COG3454 Metal-dependent hydrolase involved in phosphonate metabolism [Inorganic ion transport and metabolism]
Probab=99.93 E-value=4.8e-25 Score=186.29 Aligned_cols=311 Identities=23% Similarity=0.262 Sum_probs=168.9
Q ss_pred EEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhcccCCC
Q 014702 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (420)
Q Consensus 21 ~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~~~~ 100 (420)
++|.|++|+.-|. ++ +++++|+||+|..|..... ....-+|+.|.+++|||||+|+--....+.
T Consensus 1 ~~lsnarivl~D~---v~-~gsv~i~DG~Ia~i~~g~s-------~~~~~~d~eGd~LLPGlIeLHtD~lE~~~~----- 64 (377)
T COG3454 1 MILSNARIVLEDR---VV-NGSVLIRDGLIADIDEGIS-------PLAAGIDGEGDYLLPGLIELHTDNLERFMT----- 64 (377)
T ss_pred CccccceEEeecc---ee-eeeEEEecceEeeeccccC-------cccccccCCCCeecccchhhcchhhhcccC-----
Confidence 3688999998653 33 4999999999999988543 236789999999999999999876321111
Q ss_pred CChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeC---C-----ccC---HHHHHHHHHH---hCCee--
Q 014702 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEA---G-----GQH---VSEMAKAVEL---LGLRA-- 164 (420)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~---~-----~~~---~~~~~~~~~~---~g~~~-- 164 (420)
...++.|| .. ......=+.++.+||||+.+. | +.. ...+...... .|...
T Consensus 65 -----PRPgV~wp------~~---aAi~ahD~~l~~sGITTv~dal~iGd~~~gg~r~~~~~~midaI~~~~~~g~lrad 130 (377)
T COG3454 65 -----PRPGVRWP------PI---AAILAHDAQLAASGITTVLDALAIGDVRDGGLRLENLRKMIDAIEEAQAAGRLRAD 130 (377)
T ss_pred -----CCCCCCCC------ch---HHHHHhhHHHHhcChhhHHhhhhcCcccCCccchHHHHHHHHHHHHHHhccchhhc
Confidence 11222232 21 111122357889999999873 1 111 1122222211 11100
Q ss_pred ---Ee-e----------------------ehhccCCCCCCcccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeec--c
Q 014702 165 ---CL-V----------------------QSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIR--Q 216 (420)
Q Consensus 165 ---~~-~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~ 216 (420)
-+ + .+.|+..+|.. ....++...+.+++.....+..+..++.-. .
T Consensus 131 Hr~HlRcEvs~~~~l~~~e~~~~~p~v~LiSlMDH~PGQr-------Qf~~le~Y~~yy~~k~~~s~~e~~~~i~~r~a~ 203 (377)
T COG3454 131 HRLHLRCEVSHPATLPLFEDLMDHPRVKLISLMDHTPGQR-------QFANLEKYREYYQGKRGLSDEEFAEFIEERQAL 203 (377)
T ss_pred cceeeeeecCChhHHHHHHHHhcCCCeeEEEecCCCCCcc-------hhhhHHHHHHHHHhhcCCCHHHHHHHHHHHHHH
Confidence 00 0 11222222211 111111111111111100000000000000 0
Q ss_pred ccccCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccC-CChhhHHHHHh
Q 014702 217 IMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVW-VNHTEIGLLSR 295 (420)
Q Consensus 217 ~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~-~~~~~~~~~~~ 295 (420)
.-.+++.....+..+|++.|+.+..|-..+....+...+ .+ +.-..+ .+.+-.+..++
T Consensus 204 ~~~y~~~~r~~i~~~c~~rgI~lASHDDaT~~hV~es~~---~G------------------v~iAEFPtT~eAA~asr~ 262 (377)
T COG3454 204 SARYSDPNRQAIAALCRERGIALASHDDATVEHVAESHG---LG------------------VAIAEFPTTVEAAKASRE 262 (377)
T ss_pred HhhcccchHHHHHHHHHHcCCceecCCcCcHHHHHHHHh---cC------------------eeEEeCccHHHHHHHHHH
Confidence 001223345666778888888888887654332221111 00 011111 23344455666
Q ss_pred cCCeEEECccchhhc---cCcccHHHHHHcCCcEEEccCCCCCCCCCCHHHH-HHHHHHHhcccccccCCCCCCCCCCHH
Q 014702 296 AGVKVSHCPASAMRM---LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDE-MYLASLINKGREVFANGTTDPAALPAE 371 (420)
Q Consensus 296 ~~~~~~~~p~~~~~~---~~~~~~~~~~~~gv~~~lgsD~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ls~~ 371 (420)
.|..+.+-.....+- .+.-...++.+.|+..+++||+.|. +++.. +..+... ..+|+.
T Consensus 263 ~Gm~VlMGAPNivrGgSHsGNvsA~ela~~glLDiLsSDY~P~----SLl~A~F~La~~~--------------~~~~lp 324 (377)
T COG3454 263 LGMQVLMGAPNIVRGGSHSGNVSARELAQHGLLDILSSDYVPA----SLLHAAFRLADLG--------------SNISLP 324 (377)
T ss_pred hCchhhcCCCceeccCCcccchhHHHHHhCCceeeecccCCcH----HHHHHHHHHhhhh--------------cccCHH
Confidence 777755543332222 4556778999999999999999875 23322 2233221 236899
Q ss_pred HHHHHHhHHHHHHccCCCcccccccCccccEEEEcCC
Q 014702 372 TVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPF 408 (420)
Q Consensus 372 ~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~ 408 (420)
+|+++.|.|||+++|+.| +|+|++|++||||.+..+
T Consensus 325 qAvalvt~nPA~algl~D-RG~Ia~GlrADlv~v~~~ 360 (377)
T COG3454 325 QAVALVTKNPARALGLTD-RGRIAPGLRADLVRVRRD 360 (377)
T ss_pred HHHHHhccCHHHhcCCCc-ccccccccccceEEEecC
Confidence 999999999999999997 599999999999977544
No 93
>TIGR03583 EF_0837 probable amidohydrolase EF_0837/AHA_3915. Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. These proteins resemble aminohydrolases (see pfam01979), including dihydroorotases. The function is unknown.
Probab=99.93 E-value=3.6e-23 Score=192.22 Aligned_cols=306 Identities=15% Similarity=0.139 Sum_probs=166.1
Q ss_pred ceEEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCC-cEEeecccccccccchhhhccc
Q 014702 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQS-QILLPGFVNTHVHTSQQLAKGI 97 (420)
Q Consensus 19 ~~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g-~~v~PGfID~H~H~~~~~~~~~ 97 (420)
++++|+|++|++ +. ..+|+|+||||++|++.... .+.++||++| ++|+|||||+|+|+....
T Consensus 1 ~~~~i~n~~i~~--~~-----~~~v~i~~g~I~~v~~~~~~------~~~~~iD~~g~~~l~PG~ID~H~H~~~~~---- 63 (365)
T TIGR03583 1 YDLLIKNGRTVN--GT-----PVDIAIEDGKIAAVGTTITG------SAKQTIDLEGETYVSAGWIDDHTHCFPKS---- 63 (365)
T ss_pred CcEEEECcEEec--CC-----eeEEEEECCEEEEecCCCCC------CCCeEEECCCCeEEecCEEEeeeccCCCc----
Confidence 478999999994 31 23899999999999874321 2458999999 999999999999984210
Q ss_pred CCCCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCc---cCHHHHHHHHHHhCCeeEeeehhccCC
Q 014702 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG---QHVSEMAKAVELLGLRACLVQSTMDCG 174 (420)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~ 174 (420)
.....+ .. ..++..|||++.+++. .......+.....+.+.+....+. .
T Consensus 64 -------------------~~~~~~-~~------~~a~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~ 115 (365)
T TIGR03583 64 -------------------ALYYDE-PD------EIGVKTGVTTVVDAGSTGADDIDDFYRLAQQAKTNVFALLNIS--R 115 (365)
T ss_pred -------------------ccccCC-Hh------HhhhcCceeEEEeCCCCCCCCHHHHHHHHHhhCCcEEEEeeeh--h
Confidence 000000 00 1246889999998653 233334444444333332211111 1
Q ss_pred CCC-CcccccCChhHHHHHHHHHHHHhcCCCCCce--EEEEeec--cccccCHHHHHHHHHHHHHcCCccceeccCCcch
Q 014702 175 EGL-PASWAVRTTDDCIQSQKELYAKHHHAADGRI--RIWFGIR--QIMNATDRLLLETRDMAREFKTGIHMHVAEIPYE 249 (420)
Q Consensus 175 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~~~~~~--~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~ 249 (420)
.|. +.............+..+.+... ....+ +..+.+. +....++..+.+.+..+ +.++++.+|+.+....
T Consensus 116 ~G~~~~~~~~~~~~~~~~~l~~~~~~~---~~~vv~~~~~~t~~~i~E~gl~~~~~~~~l~~~-~~~~pv~vH~~~a~~~ 191 (365)
T TIGR03583 116 IGLVAQDELADLSNLDASAVKQAVERY---PDFIVGLKARMSKSVVGDNGIEPLEIAKQIQQE-NLELPLMVHIGSAPPE 191 (365)
T ss_pred ccccChhhhhChHHhHHHHHHHHHHhC---cCcEEEEEEeecccccccCCcCHHHHHHHHHHh-cCCCcEEEEeCCCccC
Confidence 121 11110000111222223233221 11111 2222221 11223344444444333 5789999999886543
Q ss_pred hHHHHhhcCCCCChHHHHHHhccCCCccceeeccCCCh-----------hhHHHHHhcCCeEEECc-cchhhccCcccHH
Q 014702 250 NQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH-----------TEIGLLSRAGVKVSHCP-ASAMRMLGFAPIK 317 (420)
Q Consensus 250 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~-----------~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~ 317 (420)
.....+ ... .+ ..+.|++.-.+ +.+....+.|+.+.... ...... ....
T Consensus 192 ~~~i~~-------------~~~-~g--~~~~H~fng~~~~~~r~~g~~~~~~~~~l~~G~i~d~~hg~~~~~~---~~~~ 252 (365)
T TIGR03583 192 LDEILA-------------LME-KG--DVLTHCFNGKPNGILRETGEVKPSVLEAYNRGVILDVGHGTASFSF---HVAE 252 (365)
T ss_pred HHHHHH-------------Hhc-CC--CeeeeeecCCCCCCCCCcchHHHHHHHHHhCeEEEEeCCCCCCchH---HHHH
Confidence 332222 111 01 24578765444 55666666777766541 111100 1122
Q ss_pred HHHHcC-CcEEEccCCCCCC----CCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCccc
Q 014702 318 EMLHAD-ICVSLGTDGAPSN----NRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIG 392 (420)
Q Consensus 318 ~~~~~g-v~~~lgsD~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G 392 (420)
.+...+ +..+.++|.+..+ +...+...++.... .|++++++++++|.|||+++|+++ .|
T Consensus 253 ~~~~~~~~~~td~~d~~~~~~~~gp~~~l~~~~~~~~~---------------~g~~~~ea~~~~t~npa~~~gl~~-~g 316 (365)
T TIGR03583 253 KAKRAGIFPDTISTDIYIRNRINGPVYSLATVMSKFLA---------------LGYSLEEVIEKVTKNAAEILKLTQ-KG 316 (365)
T ss_pred HHHhCCCCCcccccccccCCCccCccccHHHHHHHHHH---------------cCCCHHHHHHHHHHHHHHHhCCCC-CC
Confidence 333444 3355566653221 11123333333221 259999999999999999999975 79
Q ss_pred ccccCccccEEEEcCC
Q 014702 393 SLEAGKKADMVVVDPF 408 (420)
Q Consensus 393 ~l~~G~~ADlvv~d~~ 408 (420)
+|++|+.|||+|||.+
T Consensus 317 ~i~~g~~ad~~~~~~~ 332 (365)
T TIGR03583 317 RLQEGYDADLTIFTVK 332 (365)
T ss_pred CcCCCCcccEEEEecC
Confidence 9999999999999975
No 94
>PRK04250 dihydroorotase; Provisional
Probab=99.92 E-value=2.9e-23 Score=192.97 Aligned_cols=308 Identities=15% Similarity=0.189 Sum_probs=162.0
Q ss_pred EecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhhcccCCCCCh
Q 014702 24 HNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDL 103 (420)
Q Consensus 24 ~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~~~~~~~ 103 (420)
.+++|++.+ . ...++|+|+||+|++|++. .. ...++||++|++|+|||||+|+|+..
T Consensus 2 ~~~~v~~~~---~-~~~~~i~i~~G~I~~i~~~-~~------~~~~~iD~~g~~v~PG~ID~HvH~~~------------ 58 (398)
T PRK04250 2 LEGKFLLKG---R-IVEGGIGIENGRISKISLR-DL------KGKEVIKVKGGIILPGLIDVHVHLRD------------ 58 (398)
T ss_pred eeEEEEECC---c-EEEEEEEEECCEEEEeeCC-CC------CCCeEEECCCCEEccCEEeccccccC------------
Confidence 367888632 2 3368999999999999741 11 25689999999999999999999821
Q ss_pred HHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCccC-----HHHHHHHHHHhCCeeEeeehhccCCCCCC
Q 014702 104 MTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-----VSEMAKAVELLGLRACLVQSTMDCGEGLP 178 (420)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 178 (420)
...... .......+.++.+|||++.++++.. ............-+....+.+.. . .+
T Consensus 59 ------------~~~~~~---e~~~~~~~aa~~gGvTtv~~~p~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~-~--~~ 120 (398)
T PRK04250 59 ------------FEESYK---ETIESGTKAALHGGITLVFDMPNTKPPIMDEKTYEKRMRIAEKKSYADYALNF-L--IA 120 (398)
T ss_pred ------------CCCCcH---HHHHHHHHHHHhCCeEEEEECCCCCCCCCcHHHHHHHHHHhCcCceeeEEEEE-e--cC
Confidence 001111 1222355678899999999987432 11221222222222222222111 0 00
Q ss_pred cccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcC
Q 014702 179 ASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRK 258 (420)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~ 258 (420)
.. ..+..++.. ..++.++.... .....+.+.. ..+ +.+..+.+|+.+...... ..+
T Consensus 121 ------~~---~~~l~~l~~-------~~~k~f~~~~~-~~~~~~~~~~--~~~-~~~~~v~~H~E~~~~~~~----~~~ 176 (398)
T PRK04250 121 ------GN---CEKAEEIKA-------DFYKIFMGAST-GGIFSENFEV--DYA-CAPGIVSVHAEDPELIRE----FPE 176 (398)
T ss_pred ------CC---HHHHHHHHh-------hheEEEEecCC-CchhHHHHHH--HHH-hcCCeEEEEecChhhhhc----ccC
Confidence 01 111111111 12333322211 0111112211 122 234568888865433211 111
Q ss_pred CCC--ChH---HHHHHhccCCCccceeeccCCC-hhhHHHHHhcC---CeEEECccchhhc----------cCcccHHH-
Q 014702 259 VDH--GTV---TFLDKIEFLQNNLLSAHTVWVN-HTEIGLLSRAG---VKVSHCPASAMRM----------LGFAPIKE- 318 (420)
Q Consensus 259 ~~~--~~~---~~l~~~~~~~~~~~~~h~~~~~-~~~~~~~~~~~---~~~~~~p~~~~~~----------~~~~~~~~- 318 (420)
... ... ..+.-....+.+ .|..|+| .+.++.+++.| +++.+||.+.... .-.+|++.
T Consensus 177 ~p~~aE~~av~r~~~la~~~~~~---lhi~HvSt~~~~~~i~~~g~~~vt~Ev~ph~L~l~~~~~~~~~~~k~~PPLR~~ 253 (398)
T PRK04250 177 RPPEAEVVAIERALEAGKKLKKP---LHICHISTKDGLKLILKSNLPWVSFEVTPHHLFLTRKDYERNPLLKVYPPLRSE 253 (398)
T ss_pred CCHHHHHHHHHHHHHHHHHhCCC---EEEEeCCCHHHHHHHHHcCCCcEEEEeCHHHhccCHHHHCCCCceEEcCCCCCH
Confidence 000 001 112222223333 3555544 45577777665 5667888754211 11344442
Q ss_pred -----HHH-cCCcEEEccCCCCCC--------CCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHH
Q 014702 319 -----MLH-ADICVSLGTDGAPSN--------NRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKS 384 (420)
Q Consensus 319 -----~~~-~gv~~~lgsD~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~ 384 (420)
|.+ -+...+++|||.|+. .++.-++.+... ++.. .....+|++++++++|.|||++
T Consensus 254 ~d~~aL~~~l~~Id~i~sDHaP~~~~~k~~~~~G~~g~e~~lpl-~~~~---------v~~~~lsl~~~v~~~t~npAk~ 323 (398)
T PRK04250 254 EDRKALWENFSKIPIIASDHAPHTLEDKEAGAAGIPGLETEVPL-LLDA---------ANKGMISLFDIVEKMHDNPARI 323 (398)
T ss_pred HHHHHHHHhhccCCEEEcCCcccCHHHhhcCCCCcchHHHHHHH-HHHH---------HHhcCCCHHHHHHHHHHHHHHH
Confidence 111 134788999999862 233333332222 1111 0123599999999999999999
Q ss_pred ccCCCcccccccCccccEEEEcCCCCC
Q 014702 385 VLWDNDIGSLEAGKKADMVVVDPFSWP 411 (420)
Q Consensus 385 lgl~~~~G~l~~G~~ADlvv~d~~~~~ 411 (420)
+|+.+ +| |++|++|||+|||++..+
T Consensus 324 lgl~~-~G-L~~G~~ADlvi~D~~~~~ 348 (398)
T PRK04250 324 FGIKN-YG-IEEGNYANFAVFDMKKEW 348 (398)
T ss_pred hCCCC-cC-ccCCCcCCEEEEcCCCcE
Confidence 99954 69 999999999999988544
No 95
>cd01317 DHOase_IIa Dihydroorotase (DHOase), subgroup IIa; DHOases catalyze the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis. This subgroup also contains proteins that lack the active site, like unc-33, a C.elegans protein involved in axon growth.
Probab=99.90 E-value=3.8e-23 Score=192.31 Aligned_cols=163 Identities=16% Similarity=0.156 Sum_probs=109.5
Q ss_pred HHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCCChhhHHHHHhcCCeEEEC
Q 014702 224 LLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHC 303 (420)
Q Consensus 224 ~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~ 303 (420)
.+.++++++++.+++++++........+.... ....+......+..|+..++++++.. .+..+.++
T Consensus 173 ~v~~~~~la~~~~~~i~i~h~ss~~~l~~i~~-----------~~~~G~~~~~e~~~h~L~ld~~~~~~---~~~~~k~~ 238 (374)
T cd01317 173 MVARDLELAEATGARVHFQHLSTARSLELIRK-----------AKAKGLPVTAEVTPHHLLLDDEALES---YDTNAKVN 238 (374)
T ss_pred HHHHHHHHHHHhCCcEEEEeCCCHHHHHHHHH-----------HHHCCCCEEEEecHHHHhcCHHHHhc---cCCceEEc
Confidence 56788899999999998855554332222221 12223233334677999989888643 45566677
Q ss_pred ccchhhccCcccHHHHHHcCCcEEEccCCCCCCCCCCH--HH---------HHHHHHHHhcccccccCCCCCCCCCCHHH
Q 014702 304 PASAMRMLGFAPIKEMLHADICVSLGTDGAPSNNRMSI--VD---------EMYLASLINKGREVFANGTTDPAALPAET 372 (420)
Q Consensus 304 p~~~~~~~~~~~~~~~~~~gv~~~lgsD~~~~~~~~~~--~~---------~~~~~~~~~~~~~~~~~~~~~~~~ls~~~ 372 (420)
|..... ....++.+++++|+.+++||||+++...... |. ++.....+.... ....+++++
T Consensus 239 Pplr~~-~~~~~l~~~~~~G~i~~igsDh~p~~~~~k~~~~~~~~~Gi~g~e~~l~~~~~~~~--------~~~~~~~~~ 309 (374)
T cd01317 239 PPLRSE-EDREALIEALKDGTIDAIASDHAPHTDEEKDLPFAEAPPGIIGLETALPLLWTLLV--------KGGLLTLPD 309 (374)
T ss_pred CCCCCH-HHHHHHHHHHhcCCceEEEcCCCCCCHHHccCCHhhCCCcHhHHHHHHHHHHHHHH--------HcCCCCHHH
Confidence 754311 3456788999999999999999987532221 11 233333332211 123489999
Q ss_pred HHHHHhHHHHHHccCCCcccccccCccccEEEEcCCCCC
Q 014702 373 VLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWP 411 (420)
Q Consensus 373 al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~ 411 (420)
+++++|.|||+++|+. .|+|++|++|||+++|.+..+
T Consensus 310 ~~~~~t~npA~~lgl~--~G~l~~G~~ADlvi~d~~~~~ 346 (374)
T cd01317 310 LIRALSTNPAKILGLP--PGRLEVGAPADLVLFDPDAEW 346 (374)
T ss_pred HHHHHHHHHHHHhCCC--CCcccCCCcCCEEEECCCCCE
Confidence 9999999999999996 399999999999999988543
No 96
>TIGR03121 one_C_dehyd_A formylmethanofuran dehydrogenase subunit A. Members of this largely archaeal protein family are subunit A of the formylmethanofuran dehydrogenase. Nomenclature in some bacteria may reflect inclusion of the formyltransferase described by TIGR03119 as part of the complex, and therefore call this protein formyltransferase/hydrolase complex Fhc subunit A. Note that this model does not distinguish tungsten (FwdA) from molybdenum-containing (FmdA) forms of this enzyme; a single gene from this family is expressed constitutively in Methanobacterium thermoautotrophicum, which has both tungsten and molybdenum forms and may work interchangeably.
Probab=99.90 E-value=2.7e-22 Score=187.72 Aligned_cols=117 Identities=17% Similarity=0.157 Sum_probs=73.3
Q ss_pred EEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchhhh-cccCC
Q 014702 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLA-KGIAD 99 (420)
Q Consensus 21 ~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~-~~~~~ 99 (420)
++|+|++|++.+. ....+.++|.|+||+|++|++... ...++||++|++|+|||||+|+|+..... .+.
T Consensus 2 ~iIkng~I~dp~~-~~~~~~~dI~IedGkIveIg~~~~-------~~~eVIDa~G~vVmPGfID~HvHg~gG~~~~~R-- 71 (556)
T TIGR03121 2 ILIKNGTVYDPAN-GIDGEVMDIFIRDGKIVEPVSGGT-------KPAKVIDASGKLVMAGGVDSHTHIAGPKVNVGR-- 71 (556)
T ss_pred EEEEeEEEEcCCC-CccccccEEEEECCEEEEecCCCC-------CCCeEEECCCCEEEeCEEeeeECCCcccccccc--
Confidence 6799999995432 222245799999999999986432 14589999999999999999999965211 110
Q ss_pred CCChHHHhhhccccccCCCCh--HHHHHHHHHHHHHHHhCCcceeeeCCcc
Q 014702 100 DVDLMTWLHDRIWPYESNMTE--EDSYISTLLCGIELIHSGVTCFAEAGGQ 148 (420)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~Gvtt~~~~~~~ 148 (420)
....++|..... ........ ...+..+....+++++.|+||+.+..-+
T Consensus 72 ~~~pE~~~~~~~-~~~~~~r~Gtt~~lPTt~tt~y~ya~mGyTt~~eaa~~ 121 (556)
T TIGR03121 72 LLRPEDHRRDPE-PRTGLTRAGSGFSVPSTYATGYRYARMGYTTVFEAAVP 121 (556)
T ss_pred ccCHHHHhhcch-hhhhhcCCCcceEehhHhHHHHHHHhCCccEEecCCCC
Confidence 012233332100 00011111 1223344556688999999999996643
No 97
>cd01304 FMDH_A Formylmethanofuran dehydrogenase (FMDH) subunit A; Methanogenic bacteria and archea derive the energy for autotrophic growth from methanogenesis, the reduction of CO2 with molecular hydrogen as the electron donor. FMDH catalyzes the first step in methanogenesis, the formyl-methanofuran synthesis. In this step, CO2 is bound to methanofuran and subsequently reduced to the formyl state with electrons derived from hydrogen.
Probab=99.90 E-value=8.1e-22 Score=183.60 Aligned_cols=90 Identities=17% Similarity=0.021 Sum_probs=61.4
Q ss_pred HcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhccccc-c-------c---CCCCCCCCCCHHHHHHHHhHHHHHHccCCC
Q 014702 321 HADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREV-F-------A---NGTTDPAALPAETVLRMATINGAKSVLWDN 389 (420)
Q Consensus 321 ~~gv~~~lgsD~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------~---~~~~~~~~ls~~~al~~~T~~~A~~lgl~~ 389 (420)
++--.++++||||..++...+-+.+++.+- .+.+.. + . .-....+.+|++++++++|.|||+++|+++
T Consensus 370 ~dp~~~~~tTDhPn~gpf~~YP~~i~~lm~-~~~r~~~~~~~~~~~~~~~~l~~~~reLSLeei~~mtT~nPAKiLGL~~ 448 (541)
T cd01304 370 DDPWKVILTTDHPNGGPFTRYPRIIAWLMS-KKFRAEEIATLHKWAQDRSALPGIDREYSLYEIAIMTRAGPAKLLGLSD 448 (541)
T ss_pred CCcceEEeecCCCCCCCcccHHHHHHHHhC-HHHHHHHHHhcCHHHHhhccccCCCCCCCHHHHHHHHHHHHHHHhCCCC
Confidence 444589999999876544444444443321 100100 0 0 001234669999999999999999999964
Q ss_pred cccccccCccccEEEEcCCCCCC
Q 014702 390 DIGSLEAGKKADMVVVDPFSWPM 412 (420)
Q Consensus 390 ~~G~l~~G~~ADlvv~d~~~~~~ 412 (420)
+|+|++|+.|||+|||.++.++
T Consensus 449 -kG~L~~G~~ADLvIfD~n~~~v 470 (541)
T cd01304 449 -KGHLGVGADADIAIYDDDPDQV 470 (541)
T ss_pred -CCccCCCCcCCEEEEeCCcCcc
Confidence 6999999999999999886643
No 98
>PRK00369 pyrC dihydroorotase; Provisional
Probab=99.89 E-value=5.3e-22 Score=183.30 Aligned_cols=289 Identities=15% Similarity=0.160 Sum_probs=159.8
Q ss_pred ceeEEEECCEEEEEcCChhhhhhhccCCCcEEeC-CCcEEeecccccccccchhhhcccCCCCChHHHhhhccccccCCC
Q 014702 40 NGGVFVVQDRIKAIGQSADILQQFSQMADQIIDL-QSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNM 118 (420)
Q Consensus 40 ~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~-~g~~v~PGfID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (420)
+..|.+++|+|..|++... .++++||+ +|++|+|||||+|+|+.. +..
T Consensus 13 ~~~~~~~~~~~~~i~~~~~-------~~~~~id~~~G~~vlPG~ID~HvH~r~------------------------pg~ 61 (392)
T PRK00369 13 KEIKEICINFDRRIKEIKS-------RCKPDLDLPQGTLILPGAIDLHVHLRG------------------------LKL 61 (392)
T ss_pred CceEEEeeeeeeeEeeccC-------CCCceeecCCCCEEeCCEEEcccccCC------------------------CCC
Confidence 3478888999999987521 47889999 699999999999999932 111
Q ss_pred ChHHHHHHHHHHHHHHHhCCcceeeeCCccC----HHHHHH-HHHHhCCeeEeeehhccCCCCCCcccccCChhHHHHHH
Q 014702 119 TEEDSYISTLLCGIELIHSGVTCFAEAGGQH----VSEMAK-AVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQ 193 (420)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~~----~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (420)
...+.+. ...++++.+|||++++|+... ..+..+ ......-.....+.+.. + .. ... .
T Consensus 62 ~~~ed~~---sgs~AAa~GGvTtv~~mPnt~P~~~~~~~l~~~~~~a~~~~~vd~~~~~-~--~~------~~~---~-- 124 (392)
T PRK00369 62 SYKEDVA---SGTSEAAYGGVTLVADMPNTIPPLNTPEAITEKLAELEYYSRVDYFVYS-G--VT------KDP---E-- 124 (392)
T ss_pred cccccHH---HHHHHHHhCCcEEEEECCCCCCCCChHHHHHHHHHHhCcCCeEEEEEEe-e--cc------CCH---H--
Confidence 1111122 245678999999999987432 222222 22222222222222111 1 10 000 1
Q ss_pred HHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCCh---HHHHHHh
Q 014702 194 KELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGT---VTFLDKI 270 (420)
Q Consensus 194 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~---~~~l~~~ 270 (420)
+ +..+ +...++.+. . .....+ +++.+.+++..+.+|+.+....... .+..... ...+...
T Consensus 125 -e-l~~~---~~~g~k~f~---~-~~~~~~----~~~~~~~~~~~v~~HaE~~~l~~~~----~~~~rp~~aE~~ai~~~ 187 (392)
T PRK00369 125 -K-VDKL---PIAGYKIFP---E-DLEREE----TFRVLLKSRKLKILHPEVPLALKSN----RKLRRNCWYEIAALYYV 187 (392)
T ss_pred -H-HHHh---hCceEEEEC---C-CCchHH----HHHHHHHhCCEEEEeCCCHHHhhcc----hhcccCHHHHHHHHHHH
Confidence 1 1121 112233321 1 111222 3344445568899999764332111 1110000 0111111
Q ss_pred ccCCCccceeeccCCC-hhhHHHHHhcCCeEEECccchhhc-------cCcccHH---------HHHHcCCcEEEccCCC
Q 014702 271 EFLQNNLLSAHTVWVN-HTEIGLLSRAGVKVSHCPASAMRM-------LGFAPIK---------EMLHADICVSLGTDGA 333 (420)
Q Consensus 271 ~~~~~~~~~~h~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~-------~~~~~~~---------~~~~~gv~~~lgsD~~ 333 (420)
..+ . -.|-.|+| .+.++++++.|+++.+||.+.... .-.+|++ +.+++ ..+++|||.
T Consensus 188 ~~~-~---~lhi~HvSt~~~v~~ak~~gvt~Ev~pHhL~l~~~~~~~~k~~PPLR~~~dr~aL~~~l~~--id~i~SDHa 261 (392)
T PRK00369 188 KDY-Q---NVHITHASNPRTVRLAKELGFTVDITPHHLLVNGEKDCLTKVNPPIRDINERLWLLQALSE--VDAIASDHA 261 (392)
T ss_pred HHh-C---CEEEEECCCHHHHHHHHHCCCeEEechhHheeccCCCCceEEeCCCCCHHHHHHHHHHHHh--CCEEEeCCC
Confidence 112 2 24555554 456788888899999999865322 1134444 23344 678999999
Q ss_pred CCCCC------------CCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCcccc
Q 014702 334 PSNNR------------MSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKAD 401 (420)
Q Consensus 334 ~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~AD 401 (420)
|+... +.-++.... .++.. ....+++++++++++|.|||+++|+. .|+|++|++||
T Consensus 262 P~~~~~K~~~f~~~~~Gi~GlE~~lp-ll~~~---------v~~~~lsl~~~v~~~s~nPA~ilgl~--~g~i~~G~~AD 329 (392)
T PRK00369 262 PHSSFEKLQPYEVCPPGIAALSFTPP-FIYTL---------VSKGILSIDRAVELISTNPARILGIP--YGEIKEGYRAN 329 (392)
T ss_pred CCCHHHccCCHhhCCCCCeeHHHHHH-HHHHH---------HHcCCCCHHHHHHHHHHHHHHHhCCC--CCccCCCCccC
Confidence 86311 111111111 11110 01235999999999999999999995 38899999999
Q ss_pred EEEEcCCCCC
Q 014702 402 MVVVDPFSWP 411 (420)
Q Consensus 402 lvv~d~~~~~ 411 (420)
|++||++.++
T Consensus 330 lvi~d~~~~~ 339 (392)
T PRK00369 330 FTVIQFEDWR 339 (392)
T ss_pred EEEEeCCcee
Confidence 9999988543
No 99
>PF07969 Amidohydro_3: Amidohydrolase family; InterPro: IPR013108 Amidohydrolases are a diverse superfamily of enzymes which catalyse the hydrolysis of amide or amine bonds in a large number of different substrates including urea, cytosine, AMP, formylmethanofuran, etc [, ]. Also included in this superfamily are the phopshotriesterase enzymes, which hydrolyse P-O bonds. Members participate in a large number of processes including nucleotide metabolism, detoxification and neuronal development. They use a variety of divalent metal cofactors for catalysis: for example adenosine deaminase binds a single zinc ion, phopsphotriesterase binds two, while urease binds nickel. It has been postulated that since some of these proteins, such as those some of those involved in neuronal devlopment, appear to have lost their metal-binding centres, their function may simply be to bind, but not hydrolyse, their target molecules. This entry represents a subset of amidohydrolase domains that participate in different functions including cytosine degradation, atrazine degradation and other metabolic processes. The structure of the domain from Escherichia coli has been studied, and like other amidohydrolases it forms a classical alpha-beta TIM-barrel fold []. The active site is located in the mouth of the enzyme barrel and contains a bound iron ion that coordinates a hydroxyl nucleophile. Substrate binding involves a significant conformational change that sequesters the reaction complex from solvent.; PDB: 4F0R_A 4F0S_A 1V4Y_A 1M7J_A 1RK5_A 1RJP_A 1RJR_A 1RJQ_A 1RK6_A 1V51_A ....
Probab=99.89 E-value=1.1e-21 Score=185.82 Aligned_cols=177 Identities=25% Similarity=0.235 Sum_probs=125.7
Q ss_pred EeeccccccCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCCChhhHH
Q 014702 212 FGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIG 291 (420)
Q Consensus 212 ~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~~~ 291 (420)
.........+++.+.++++.+.+.|+++.+|+..+.... .+++.+.....+..+.|+..+++++++
T Consensus 214 ~~~~g~~~~~~~~l~~~v~~a~~~g~~v~vHa~gd~a~~--------------~~l~a~~~~~~~~~i~h~~~~~~~~~~ 279 (404)
T PF07969_consen 214 VHISGLPSFDPEELEELVRAAREAGLQVAVHAIGDRAID--------------EALDAIEAARARGRIEHAELIDPDDIE 279 (404)
T ss_dssp EEETC--SSSHHHHHHHHHHHHHCT-EEEEEEESHHHHH--------------HHHHHHHHHTCCHEEEEHCBCCHHHHH
T ss_pred ccccccccccchhHHHHHHHHHhcCCeeEEEEcCCchHH--------------hHHHHHHhhcccceeeccccCCHHHHH
Confidence 344455566777799999999999999999996543322 223333333332378999999999999
Q ss_pred HHHhcCCeEEECccch--------------hhccCcccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhccccc
Q 014702 292 LLSRAGVKVSHCPASA--------------MRMLGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREV 357 (420)
Q Consensus 292 ~~~~~~~~~~~~p~~~--------------~~~~~~~~~~~~~~~gv~~~lgsD~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (420)
++++.++.+.++|... .+.....|++.+.+.|+.++++||++. ...+++..+..+.........
T Consensus 280 ~~~~l~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~v~~gsD~p~--~~~~P~~~~~~~~~~~~~~~~ 357 (404)
T PF07969_consen 280 RMAELGVTASVQPHFLFSWGGEWYEERLGPERARRIYPIRSLLDAGVRVALGSDAPV--SPPNPFRGIWAAVTRQMAGER 357 (404)
T ss_dssp HHHHHTTEEEECCTHHHHETEETHHHHHHHHCGGGBTHHHHHHHCTTEEEE--TTTT--SSCCHHHHHHHHHHHHHCHHT
T ss_pred HHHHhCCccccChhHhhhccchhhhhhhhhHHHHHHhHHHHHHhccCceecCcCCcc--cccCcchhhhhhhcccccccc
Confidence 9999999999999211 122456899999999999999999986 234677777776655443211
Q ss_pred ccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEE
Q 014702 358 FANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVV 404 (420)
Q Consensus 358 ~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv 404 (420)
........+.+|+++|++++|.|||+.+|+++++|+|++||.|||||
T Consensus 358 ~~~~~~~~~~ls~~eAl~~~T~~~A~~~g~~~~~Gsl~~Gk~AD~vV 404 (404)
T PF07969_consen 358 SGPVLGPEQRLSLEEALRAYTSNPARALGLEDRKGSLEPGKLADFVV 404 (404)
T ss_dssp HHHCCGGTGSSHHHHHHHHTTHHHHHHTT-TTTSSSSSTTSBS-EEE
T ss_pred ccccccccccCCHHHHHHHHhHHHHHHcCCCCCcceECCCCCcCeEC
Confidence 01111122579999999999999999999999899999999999997
No 100
>COG0804 UreC Urea amidohydrolase (urease) alpha subunit [Amino acid transport and metabolism]
Probab=99.89 E-value=9.4e-23 Score=176.88 Aligned_cols=336 Identities=18% Similarity=0.212 Sum_probs=202.1
Q ss_pred CCceEEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhh-----hccCCCcEEeCCCcEEeecccccccccch
Q 014702 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQ-----FSQMADQIIDLQSQILLPGFVNTHVHTSQ 91 (420)
Q Consensus 17 ~~~~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~-----~~~~~~~~iD~~g~~v~PGfID~H~H~~~ 91 (420)
...|++|.|+.|++.. -+..+||.|+||||+.||+....... .-+..+++|-..|++|.-|-||+|+|+--
T Consensus 65 ~~~D~VITNa~IiD~~----Gi~KADiGikdGrI~~IGKaGNPd~~dgV~iiiG~sTe~iagEg~I~TAGGiDtHiHfI~ 140 (568)
T COG0804 65 GALDLVITNALIIDYW----GIVKADIGIKDGRIAGIGKAGNPDIMDGVTIIIGPSTEIIAGEGKIVTAGGIDTHIHFIC 140 (568)
T ss_pred CcccEEEeeeEEEecc----ceEEeecccccceEEEeecCCCCCccCCceEEeccccceecCCceEEeeccccceeEEec
Confidence 4579999999999543 34678999999999999986542110 12346688899999999999999999821
Q ss_pred hhhcccCCCCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCcc---------------CHHHHHHH
Q 014702 92 QLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ---------------HVSEMAKA 156 (420)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~---------------~~~~~~~~ 156 (420)
+. ....++.+|+||++.-|.. +...+.++
T Consensus 141 ----------------------------Pq--------qi~~Al~sGiTtmiGGGtGpa~Gt~aTT~TpG~w~i~rMl~a 184 (568)
T COG0804 141 ----------------------------PQ--------QIEEALASGITTMIGGGTGPADGTNATTCTPGPWHIARMLQA 184 (568)
T ss_pred ----------------------------HH--------HHHHHHhcCcEEEecCccCCCCCcccccccCCHHHHHHHHHh
Confidence 11 2346789999999864421 12345555
Q ss_pred HHHhCCeeEeeehhccCCCCCCcccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHcC
Q 014702 157 VELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFK 236 (420)
Q Consensus 157 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~ 236 (420)
+....++.-+. +-|.. +.. ..+.++... +.++ +.++..+..++..++..++.|.+++
T Consensus 185 ~d~~p~N~g~l------gKGn~------s~~------~~L~Eqi~a---Ga~G--lKlHEDWG~TpaaI~~~L~VAD~~D 241 (568)
T COG0804 185 ADGLPMNIGFL------GKGNA------SNP------APLAEQIEA---GAIG--LKLHEDWGATPAAIDTCLSVADEYD 241 (568)
T ss_pred hhcCceeeEEe------ecCCC------CCc------hhHHHHHhh---ccce--eEeecccCCCHHHHHHHHhhhhhhc
Confidence 55555544211 11111 111 122222222 3333 6678888899999999999999999
Q ss_pred CccceeccCCcc---hhHHHHhhcC--------CCCC---hHHHHHHhccCCC-----ccceeeccCCChhhHHHHH-hc
Q 014702 237 TGIHMHVAEIPY---ENQVVMDTRK--------VDHG---TVTFLDKIEFLQN-----NLLSAHTVWVNHTEIGLLS-RA 296 (420)
Q Consensus 237 ~~v~~h~~~~~~---~~~~~~~~~~--------~~~~---~~~~l~~~~~~~~-----~~~~~h~~~~~~~~~~~~~-~~ 296 (420)
+.|.+|...-.. .+.-...+.+ .+.+ ..+++...+..+. +.+.......-+|.++.+. .+
T Consensus 242 vqVaiHtDTLNEsGfvEdTi~A~~gRtIHtyHtEGAGGGHAPDiikv~~~~NvLPsSTNPT~PytvNT~~EhlDMlMVcH 321 (568)
T COG0804 242 VQVAIHTDTLNESGFVEDTIAAIKGRTIHTYHTEGAGGGHAPDIIKVAGQPNVLPSSTNPTRPYTVNTIDEHLDMLMVCH 321 (568)
T ss_pred eEEEEeecccccccchHhHHHHhcCceeEEeeccCCCCCCccHHHHHccCCCcCcCCCCCCCCcccccHHHhhhhhhhhc
Confidence 999999865322 1111111111 0000 1122222221110 1111111111112222211 00
Q ss_pred CCeEEE-----CccchhhccCcccHHHHHHcCCcEEEccCCCCCCCCCC-HHHHHHHHHHHhcccccccCCCCCCCCCCH
Q 014702 297 GVKVSH-----CPASAMRMLGFAPIKEMLHADICVSLGTDGAPSNNRMS-IVDEMYLASLINKGREVFANGTTDPAALPA 370 (420)
Q Consensus 297 ~~~~~~-----~p~~~~~~~~~~~~~~~~~~gv~~~lgsD~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~ 370 (420)
...-.+ ...+..|...+..-.-|.+.|+.-+++||....+.-.. ..+.++.+..+.+.+..+.........+-.
T Consensus 322 hL~p~ipeDvaFAeSRIR~eTIAAEdiLhDmGafSmisSDSQAMGRvGEvi~RtwQtA~kmK~qrG~L~~d~~~nDN~Rv 401 (568)
T COG0804 322 HLDPRIPEDVAFAESRIRPETIAAEDILHDMGAFSMISSDSQAMGRVGEVITRTWQTADKMKKQRGALPEDAGGNDNFRV 401 (568)
T ss_pred cCCCCCcchhhhhhhccchhhhhHHHHHhhccceEEeccchHhhhccchhhhhHHHHHHHHHHhcCCCCCCCCCCccHHH
Confidence 000000 00011111222333457788999999999876543222 346667776666666666555444567788
Q ss_pred HHHHHHHhHHHHHHccCCCcccccccCccccEEEEcCCCCCCCCC
Q 014702 371 ETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMVPV 415 (420)
Q Consensus 371 ~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~~~ 415 (420)
...+...|.|||-..|++..+||+|+||.||||+|++-.|.+.|.
T Consensus 402 kRYiaKyTINPAIthGis~~vGSvEvGK~ADlVLW~PaFFGvKP~ 446 (568)
T COG0804 402 KRYIAKYTINPAITHGISHEVGSVEVGKLADLVLWDPAFFGVKPE 446 (568)
T ss_pred hhhhhheecCHHHhcccchhccceeccceeeeeeechhhcCCCcc
Confidence 999999999999999999999999999999999999998886653
No 101
>COG3653 N-acyl-D-aspartate/D-glutamate deacylase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.89 E-value=2.9e-21 Score=169.12 Aligned_cols=71 Identities=18% Similarity=0.253 Sum_probs=59.5
Q ss_pred CCCceEEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccchh
Q 014702 16 GSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQ 92 (420)
Q Consensus 16 ~~~~~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~ 92 (420)
++.+|++|++|.|| |+.++..+..+|.|+||+|++|++....-. -+.++||+.|++|.|||||.|+|.+..
T Consensus 3 ~~~YD~ViR~g~if--DGtGnp~f~tdvgIrDGvIaav~kg~~dg~----~~~eevDaagriVaPGFIDvHtHyD~~ 73 (579)
T COG3653 3 MVTYDVVIRDGLIF--DGTGNPPFTTDVGIRDGVIAAVAKGALDGT----GCPEEVDAAGRIVAPGFIDVHTHYDAE 73 (579)
T ss_pred ceeeeEEEeeceEE--eCCCCCccccccccccceEEEEeccccccc----CCCeeecccCcEecccEEEeeecccce
Confidence 45689999999999 666777788899999999999999654211 144899999999999999999999653
No 102
>cd01302 Cyclic_amidohydrolases Cyclic amidohydrolases, including hydantoinase, dihydropyrimidinase, allantoinase, and dihydroorotase, are involved in the metabolism of pyrimidines and purines, sharing the property of hydrolyzing the cyclic amide bond of each substrate to the corresponding N-carbamyl amino acids. Allantoinases catalyze the degradation of purines, while dihydropyrimidinases and hydantoinases, a microbial counterpart of dihydropyrimidinase, are involved in pyrimidine degradation. Dihydroorotase participates in the de novo synthesis of pyrimidines.
Probab=99.86 E-value=4.2e-20 Score=168.99 Aligned_cols=264 Identities=20% Similarity=0.217 Sum_probs=147.1
Q ss_pred cEEeecccccccccchhhhcccCCCCChHHHhhhccccccCCCC-hHHHHHHHHHHHHHHHhCCcceeeeCCccC-----
Q 014702 76 QILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMT-EEDSYISTLLCGIELIHSGVTCFAEAGGQH----- 149 (420)
Q Consensus 76 ~~v~PGfID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~~----- 149 (420)
++|+||+||+|+|+.. +.+. ..+.+. ...+.++.+||||+++++...
T Consensus 1 ~~vlPG~iD~HvH~r~------------------------pg~~~~~e~~~---t~t~aA~~GG~Ttv~~mpn~~p~~~~ 53 (337)
T cd01302 1 LLVLPGFIDIHVHLRD------------------------PGGTTYKEDFE---SGSRAAAAGGVTTVIDMPNTGPPPID 53 (337)
T ss_pred CEecCCeeEeeeccCC------------------------CCCCCchhHHH---HHHHHHHhCCCcEEEECCCCCCCCCc
Confidence 5899999999999932 1111 112122 245678999999999987431
Q ss_pred HHHHHHHHHHhCCeeEeeehhccCCCCCCcccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeeccc--cccCHHHHHH
Q 014702 150 VSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQI--MNATDRLLLE 227 (420)
Q Consensus 150 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~l~~ 227 (420)
.............+....+...... .. .....+..+ +...+...++++...... ...+.+.+.+
T Consensus 54 ~~~~~~~~~~a~~~~~~d~~~~~~~--~~--------~~~~~el~~----l~~~Gv~g~K~f~~~~~~~~~~~~~~~l~~ 119 (337)
T cd01302 54 LPAIELKIKLAEESSYVDFSFHAGI--GP--------GDVTDELKK----LFDAGINSLKVFMNYYFGELFDVDDGTLMR 119 (337)
T ss_pred HHHHHHHHHHhCcCcEeeEEEEEec--cC--------ccCHHHHHH----HHHcCCcEEEEEEeccCCCccccCHHHHHH
Confidence 2222222222222222222211110 00 001222222 223344456655432221 1456778888
Q ss_pred HHHHHHHcCCccceeccCCcchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCCC-hhhHHHHHhcC--CeEEECc
Q 014702 228 TRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN-HTEIGLLSRAG--VKVSHCP 304 (420)
Q Consensus 228 ~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~-~~~~~~~~~~~--~~~~~~p 304 (420)
.++.+.+.+.++.+|+.. ...+. ...+.+..+.|...-. -+.++.+++.| +++.+||
T Consensus 120 ~~~~~~~~g~~v~~H~Er-----------------~~~la---~~~g~~l~i~Hiss~~~le~i~~ak~~g~~vt~ev~p 179 (337)
T cd01302 120 TFLEIASRGGPVMVHAER-----------------AAQLA---EEAGANVHIAHVSSGEALELIKFAKNKGVKVTCEVCP 179 (337)
T ss_pred HHHHHHhcCCeEEEeHHH-----------------HHHHH---HHhCCcEEEEeCCCHHHHHHHHHHHHCCCcEEEEcCh
Confidence 888888889999999961 11111 1233334455554211 12344445555 4455677
Q ss_pred cchhhc-----------cCccc---------HHHHHHcCCcEEEccCCCCCCCCC-----CHH--------HHHHHHHHH
Q 014702 305 ASAMRM-----------LGFAP---------IKEMLHADICVSLGTDGAPSNNRM-----SIV--------DEMYLASLI 351 (420)
Q Consensus 305 ~~~~~~-----------~~~~~---------~~~~~~~gv~~~lgsD~~~~~~~~-----~~~--------~~~~~~~~~ 351 (420)
.+.... ...+| +.+.+++|+..+++|||.|+.... +++ -+......+
T Consensus 180 h~L~l~~~~~~~~~~~~k~~Pplr~~~~~~~L~~~l~~G~id~i~sDh~p~~~~~k~~~~~~~~a~~G~~g~e~~l~~~~ 259 (337)
T cd01302 180 HHLFLDESMLRLNGAWGKVNPPLRSKEDREALWEGVKNGKIDTIASDHAPHSKEEKESGKDIWKAPPGFPGLETRLPILL 259 (337)
T ss_pred hhheeCHHHhhCCCceEEEeCCCCCHHHHHHHHHHHhCCCCCEEecCCCCCCHHHhccCCCcccCCCCcccHHHHHHHHH
Confidence 653110 11123 345677899999999999863100 011 011122222
Q ss_pred hcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEcCCCC
Q 014702 352 NKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSW 410 (420)
Q Consensus 352 ~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~ 410 (420)
.... ..+++++++++++|.|||+++|+.+ +|+|++|++|||+|||++.-
T Consensus 260 ~~~~---------~~~i~~~~~~~~~s~~pA~~~gl~~-~g~i~~G~~ADlvi~d~~~~ 308 (337)
T cd01302 260 TEGV---------KRGLSLETLVEILSENPARIFGLYP-KGTIAVGYDADLVIVDPKKE 308 (337)
T ss_pred HHHH---------hcCCCHHHHHHHHHHHHHHHcCCCC-CCccccCCcCCEEEEeCCCc
Confidence 1111 1359999999999999999999966 59999999999999999853
No 103
>cd01318 DHOase_IIb Dihydroorotase (DHOase), subgroup IIb; DHOases catalyze the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis. This group contains the archeal members of the DHOase family.
Probab=99.86 E-value=2e-20 Score=172.16 Aligned_cols=178 Identities=18% Similarity=0.176 Sum_probs=106.1
Q ss_pred cCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcC----CCCCh--------HHHHHHhccCCCccceeeccCCCh
Q 014702 220 ATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRK----VDHGT--------VTFLDKIEFLQNNLLSAHTVWVNH 287 (420)
Q Consensus 220 ~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~----~~~~~--------~~~l~~~~~~~~~~~~~h~~~~~~ 287 (420)
.+...+.++++.+. ..+.+|+............... ....+ ...+.-....+.+..+.|.. +.
T Consensus 108 ~~~~~l~~~~~~~~---~~v~~H~E~~~l~~~~~~~~~~~~~~~~~~P~~aE~~av~r~~~la~~~~~~~hi~Hvs--~~ 182 (361)
T cd01318 108 DDEETLERIFAEGS---VLVTFHAEDEDRLRENRKELKGESAHPRIRDAEAAAVATARALKLARRHGARLHICHVS--TP 182 (361)
T ss_pred CCHHHHHHHHHhcC---CeEEEeCCChHHHHHHHhhhhhccCCCCcCCHHHHHHHHHHHHHHHHHHCCCEEEEeCC--CH
Confidence 46667777666553 7889999775432211111100 00001 01222222344445455554 34
Q ss_pred hhHHHHHhc--CCeEEECccchhhc-----------cCcccHH---------HHHHcCCcEEEccCCCCCCC--------
Q 014702 288 TEIGLLSRA--GVKVSHCPASAMRM-----------LGFAPIK---------EMLHADICVSLGTDGAPSNN-------- 337 (420)
Q Consensus 288 ~~~~~~~~~--~~~~~~~p~~~~~~-----------~~~~~~~---------~~~~~gv~~~lgsD~~~~~~-------- 337 (420)
+.++++++. ++.+.+||.+.... ...+|++ +.+++|...+++|||.|+..
T Consensus 183 ~~~~~i~~~k~~vt~ev~ph~L~l~~~~~~~~~~~~k~~PPlr~~~d~~aL~~~l~~G~id~i~SDh~P~~~~~k~~~~~ 262 (361)
T cd01318 183 EELKLIKKAKPGVTVEVTPHHLFLDVEDYDRLGTLGKVNPPLRSREDRKALLQALADGRIDVIASDHAPHTLEEKRKGYP 262 (361)
T ss_pred HHHHHHHHhCCCeEEEeCHHHhhcCHHHHhcCCCeEEEeCCCCCHHHHHHHHHHHhCCCCCEEeeCCCCCCHHHccCChh
Confidence 567777766 78899999863211 1124544 34788999999999987521
Q ss_pred ----CCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEcCCCCCCC
Q 014702 338 ----RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFSWPMV 413 (420)
Q Consensus 338 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~~~~~ 413 (420)
++.-.+.+ ...+... ....+++++++++++|.|||+++|+.+ +|+|++|++|||+|||++..+..
T Consensus 263 ~a~~G~~g~e~~-l~~~~~~---------v~~~~l~l~~a~~~~t~nPA~~lgl~~-~G~i~~G~~ADlvv~d~~~~~~v 331 (361)
T cd01318 263 AAPSGIPGVETA-LPLMLTL---------VNKGILSLSRVVRLTSHNPARIFGIKN-KGRIAEGYDADLTVVDLKEERTI 331 (361)
T ss_pred hCCCCCccHHHH-HHHHHHH---------HHcCCCCHHHHHHHHhHHHHHHhCCCC-CCccCCCCcCCEEEEeCCCCEEE
Confidence 11111111 1111100 012359999999999999999999965 69999999999999999865443
No 104
>PRK06886 hypothetical protein; Validated
Probab=99.86 E-value=2e-19 Score=161.26 Aligned_cols=272 Identities=18% Similarity=0.169 Sum_probs=177.1
Q ss_pred cccccccccchhhhcccC-----CCCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCC-------cc
Q 014702 81 GFVNTHVHTSQQLAKGIA-----DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG-------GQ 148 (420)
Q Consensus 81 GfID~H~H~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~-------~~ 148 (420)
||||+|+|++.....+.. ...++.+.+. .+......++.++...++.+.+..++.+|+|.++..- -.
T Consensus 21 gfv~~H~HlDk~~~~~~~~~~~~~~g~l~e~i~-~~~~~k~~~t~~dv~~Ra~~~l~~~~~~Gtt~iRtHvdvd~~~~l~ 99 (329)
T PRK06886 21 GWVNAHAHADRAFTMTPEKIAIYHYANLQQKWD-LVDEVKRNSTVEDYYARFSQAIELMISQGVTAFGTFVDIDPICEDR 99 (329)
T ss_pred CCccccccccccccCCCccccccCCCCHHHHHH-HHHHHhccCCHHHHHHHHHHHHHHHHHcCcccEeeeeccCCCcccc
Confidence 999999999987654321 2233333222 1122345567788888899999999999999887532 12
Q ss_pred CHHHHHHHHHHhCCeeEeeehhccCCCCCCcccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeecc---ccccCHHHH
Q 014702 149 HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQ---IMNATDRLL 225 (420)
Q Consensus 149 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~l 225 (420)
..+...+..++..-+.-+..+.+ ...|+- .... .+++++.... ...++.. +.. ....+.+.+
T Consensus 100 ~~~a~~~~r~~~~~~idlq~vaf-Pq~g~~----~~~~-------~~l~~~al~~-advvGGi--P~~~~~~~~~~~e~l 164 (329)
T PRK06886 100 AIIAAHKAREVYKHDIILKFANQ-TLKGVI----EPTA-------KKWFDIGSEM-VDMIGGL--PYRDELDYGRGLEAM 164 (329)
T ss_pred HHHHHHHHHHHhcCcceEEEEec-Chhhcc----CccH-------HHHHHHHHHh-CCEEeCc--cCCcCCCCCCCHHHH
Confidence 23444444444433333332211 111221 1011 1222222122 2333332 222 135678899
Q ss_pred HHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCCChhh-------HHHHHhcCC
Q 014702 226 LETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTE-------IGLLSRAGV 298 (420)
Q Consensus 226 ~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~-------~~~~~~~~~ 298 (420)
+.++++|+++|++|++|+.+.........+. ........++. .+++++|+..++..+ ++++++.|+
T Consensus 165 ~~~~~lA~~~g~~Id~Hlde~~~~~~~~le~------l~~~~~~~Gl~-grV~~sH~~~L~~~~~~~~~~~i~~La~agi 237 (329)
T PRK06886 165 DILLDTAKSLGKMVHVHVDQFNTPKEKETEQ------LCDKTIEHGMQ-GRVVAIHGISIGAHSKEYRYRLYQKMREADM 237 (329)
T ss_pred HHHHHHHHHcCCCeEEeECCCCchhHHHHHH------HHHHHHHcCCC-CCEEEEEeccccCcChhhHHHHHHHHHHcCC
Confidence 9999999999999999999875443222111 11112245654 479999999999765 899999999
Q ss_pred eEEECccchhh----------ccCcccHHHHHHcCCcEEEccCCCCC----CCCCCHHHHHHHHHHHhcccccccCCCCC
Q 014702 299 KVSHCPASAMR----------MLGFAPIKEMLHADICVSLGTDGAPS----NNRMSIVDEMYLASLINKGREVFANGTTD 364 (420)
Q Consensus 299 ~~~~~p~~~~~----------~~~~~~~~~~~~~gv~~~lgsD~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (420)
.+++||.++.. ..+..|+++|.+.||++++|||+... ..+.++++.++.+....+.
T Consensus 238 ~Vv~~P~snl~l~~~~~~~p~~rGv~pv~eL~~aGV~V~lGtDnv~D~~~p~g~~Dmle~~~l~~~~~~~---------- 307 (329)
T PRK06886 238 MVIACPMAWIDSNRKEDLMPFHNALTPADEMIPEGITVALGTDNICDYMVPLCEGDMWQELSLLAAGCRF---------- 307 (329)
T ss_pred eEEECchhhhhhccccccCcCCCCCCCHHHHHHCCCeEEEecCCCcccCCCCCCCCHHHHHHHHHHHcCC----------
Confidence 99999998652 25678999999999999999998632 2457899999988665431
Q ss_pred CCCCCHHHHHHHHhHHHHHHccCC
Q 014702 365 PAALPAETVLRMATINGAKSVLWD 388 (420)
Q Consensus 365 ~~~ls~~~al~~~T~~~A~~lgl~ 388 (420)
.++.++++++|.|+|+++|++
T Consensus 308 ---~~~~~~l~maT~~gAraLgl~ 328 (329)
T PRK06886 308 ---YDLDEMVNIASINGRKVLGLE 328 (329)
T ss_pred ---CCHHHHHHHHhhhHHHHhCCC
Confidence 368999999999999999985
No 105
>cd01306 PhnM PhnM is believed to be a subunit of the membrane associated C-P lyase complex. C-P lyase is thought to catalyze the direct cleavage of inactivated C-P bonds to yield inorganic phosphate and the corresponding hydrocarbons. It is responsible for cleavage of alkylphosphonates, which are utilized as sole phosphorus sources by many bacteria.
Probab=99.85 E-value=6.1e-20 Score=164.04 Aligned_cols=150 Identities=17% Similarity=0.222 Sum_probs=110.4
Q ss_pred cCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCCChhhHHHHHhcCCe
Q 014702 220 ATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVK 299 (420)
Q Consensus 220 ~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~ 299 (420)
.+.+.+..+++.|+++|+++.+|+.......+...+ .+. .+..|. .+.+.+..+++.|+.
T Consensus 160 ~~~~~~~~iv~~A~~~gl~vasH~d~~~~~v~~a~~--------------~Gv----~~~E~p--~t~e~a~~a~~~G~~ 219 (325)
T cd01306 160 YAPANRSELAALARARGIPLASHDDDTPEHVAEAHE--------------LGV----VISEFP--TTLEAAKAARELGLQ 219 (325)
T ss_pred cCHHHHHHHHHHHHHCCCcEEEecCCChHHHHHHHH--------------CCC----eeccCC--CCHHHHHHHHHCCCE
Confidence 346789999999999999999999875432222211 111 112333 578889999999999
Q ss_pred EEECccchhhc---cCcccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHH
Q 014702 300 VSHCPASAMRM---LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRM 376 (420)
Q Consensus 300 ~~~~p~~~~~~---~~~~~~~~~~~~gv~~~lgsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~ 376 (420)
++.++....+. .+..+++++.+.|+.++++||+.+. +++...... .. ..++++++++++
T Consensus 220 vv~gapn~lrg~s~~g~~~~~~ll~~Gv~~al~SD~~p~----sll~~~~~l--a~------------~~gl~l~eAl~~ 281 (325)
T cd01306 220 TLMGAPNVVRGGSHSGNVSARELAAHGLLDILSSDYVPA----SLLHAAFRL--AD------------LGGWSLPEAVAL 281 (325)
T ss_pred EEecCcccccCccccccHhHHHHHHCCCeEEEEcCCCcH----hHHHHHHHH--HH------------HcCCCHHHHHHH
Confidence 98876544332 3456889999999999999999653 233222111 11 135999999999
Q ss_pred HhHHHHHHccCCCcccccccCccccEEEEcCC
Q 014702 377 ATINGAKSVLWDNDIGSLEAGKKADMVVVDPF 408 (420)
Q Consensus 377 ~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~ 408 (420)
+|.|||+++|+++ +|+|++|+.||||+||.+
T Consensus 282 aT~nPA~~lGl~d-~G~I~~G~~ADlvvvd~~ 312 (325)
T cd01306 282 VSANPARAVGLTD-RGSIAPGKRADLILVDDM 312 (325)
T ss_pred HhHHHHHHcCCCC-CCCcCCCCCCCEEEEeCC
Confidence 9999999999985 699999999999999986
No 106
>cd01295 AdeC Adenine deaminase (AdeC) directly deaminates adenine to form hypoxanthine. This reaction is part of one of the adenine salvage pathways, as well as the degradation pathway. It is important for adenine utilization as a purine, as well as a nitrogen source in bacteria and archea.
Probab=99.84 E-value=2.9e-19 Score=168.58 Aligned_cols=260 Identities=17% Similarity=0.230 Sum_probs=143.0
Q ss_pred eCCCcEEeecccccccccchhhhcccCCCCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCc----
Q 014702 72 DLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG---- 147 (420)
Q Consensus 72 D~~g~~v~PGfID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~---- 147 (420)
|++|++|+|||||+|+|+.. ...+... ..+.++++||||+++.+-
T Consensus 1 Da~G~~v~PG~ID~H~Hi~~-------------------------~~~~~~~------~~~~a~~~GvTtvv~~p~~~~~ 49 (422)
T cd01295 1 DAEGKYIVPGFIDAHLHIES-------------------------SMLTPSE------FAKAVLPHGTTTVIADPHEIAN 49 (422)
T ss_pred CCCCCEEccCEEEccCCcCC-------------------------CCCChHH------HHHHHHCCCcEEEEeCCCCCCc
Confidence 78999999999999999932 1111111 235678999999998531
Q ss_pred ----cCHHHHHHHHHHhCCeeEeeehhccCCCCCCcccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeeccccccCHH
Q 014702 148 ----QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDR 223 (420)
Q Consensus 148 ----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 223 (420)
.......+.+++..++.+..... ..+. .............+..++++. .+--.++..+.+... ....+
T Consensus 50 v~g~~~~~~~~~~a~~~p~~~~~~~p~--~vp~--t~~e~~g~~~~~~~i~~l~~~---~~vvglgE~md~~~v-~~~~~ 121 (422)
T cd01295 50 VAGVDGIEFMLEDAKKTPLDIFWMLPS--CVPA--TPFETSGAELTAEDIKELLEH---PEVVGLGEVMDFPGV-IEGDD 121 (422)
T ss_pred CCCHHHHHHHHHHHhCCCceEEEeCCC--cCCC--CCCCCCCCcCCHHHHHHHhcC---CCCcEEEEeccCccc-cCCcH
Confidence 11223334344444444332211 0000 010000011012233333221 111122222222111 23556
Q ss_pred HHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCCChhhHHHHHhcCCeEEEC
Q 014702 224 LLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHC 303 (420)
Q Consensus 224 ~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~ 303 (420)
.+.+.++.+++.++++..|+...... .. .. +...+ ....|.....++.++++ ++|+.+.++
T Consensus 122 ~l~~~i~~A~~~g~~v~~Ha~g~~~~--~L----------~a-~l~aG-----i~~dH~~~~~eea~e~l-~~G~~i~i~ 182 (422)
T cd01295 122 EMLAKIQAAKKAGKPVDGHAPGLSGE--EL----------NA-YMAAG-----ISTDHEAMTGEEALEKL-RLGMYVMLR 182 (422)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCCCHH--HH----------HH-HHHcC-----CCCCcCCCcHHHHHHHH-HCCCEEEEE
Confidence 78888899999999999999664411 00 01 11111 11247666455555655 689988877
Q ss_pred ccchhhccCcccHHHHHH--cCCcEEEccCCCCCCCC---CCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHh
Q 014702 304 PASAMRMLGFAPIKEMLH--ADICVSLGTDGAPSNNR---MSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMAT 378 (420)
Q Consensus 304 p~~~~~~~~~~~~~~~~~--~gv~~~lgsD~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T 378 (420)
+.+.... ...+.+.+. .+.+++++||.+..... ..+...++.+. ..+++++++++++|
T Consensus 183 ~g~~~~~--~~~~~~~l~~~~~~~i~l~TD~~~~~~~~~~g~~~~v~r~a~---------------~~g~s~~eal~~aT 245 (422)
T cd01295 183 EGSIAKN--LEALLPAITEKNFRRFMFCTDDVHPDDLLSEGHLDYIVRRAI---------------EAGIPPEDAIQMAT 245 (422)
T ss_pred CcccHhh--HHHHHHhhhhccCCeEEEEcCCCCchhhhhcchHHHHHHHHH---------------HcCCCHHHHHHHHh
Confidence 6543110 001111122 47899999998532110 01111111110 13599999999999
Q ss_pred HHHHHHccCCCcccccccCccccEEEEcC
Q 014702 379 INGAKSVLWDNDIGSLEAGKKADMVVVDP 407 (420)
Q Consensus 379 ~~~A~~lgl~~~~G~l~~G~~ADlvv~d~ 407 (420)
.|||+++|+ +++|+|++|+.|||+|+|.
T Consensus 246 ~n~A~~~gl-~~~G~i~~G~~AD~vv~~~ 273 (422)
T cd01295 246 INPAECYGL-HDLGAIAPGRIADIVILDD 273 (422)
T ss_pred HHHHHHcCC-CCCcccCCCCcCCEEEECC
Confidence 999999999 5679999999999999984
No 107
>COG1229 FwdA Formylmethanofuran dehydrogenase subunit A [Energy production and conversion]
Probab=99.84 E-value=9.3e-20 Score=158.66 Aligned_cols=96 Identities=22% Similarity=0.136 Sum_probs=66.4
Q ss_pred HHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccc-------c----CCCCCCCCCCHHHHHHHHhHHHHHHccCC
Q 014702 320 LHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVF-------A----NGTTDPAALPAETVLRMATINGAKSVLWD 388 (420)
Q Consensus 320 ~~~gv~~~lgsD~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~----~~~~~~~~ls~~~al~~~T~~~A~~lgl~ 388 (420)
.+.-.++.+.||+|..++...+-+.+.+.. ..+.+... . .-....+.++++++..+.-.+|||.+|+.
T Consensus 380 i~dp~kv~lTTD~PNgGpFt~YP~v~awlM-S~k~R~~~i~~~hkwa~~rs~l~~idrE~t~~eia~~TRa~~ak~lgl~ 458 (575)
T COG1229 380 INDPWKVVLTTDSPNGGPFTRYPEVMAWLM-SEKYREEWIEGVHKWAQDRSALAGIDRELTLYELAIMTRANPAKVLGLS 458 (575)
T ss_pred ecCCCeEEEeccCCCCCCccccHHHHHHHH-hHHHHHHHHhhhhHhhhhhcccccccccccHHHHHHHHhcChhhhcccc
Confidence 344567899999987665444433332221 11100000 0 00123466899999999999999999999
Q ss_pred CcccccccCccccEEEEcCCCCCCCCCC
Q 014702 389 NDIGSLEAGKKADMVVVDPFSWPMVPVH 416 (420)
Q Consensus 389 ~~~G~l~~G~~ADlvv~d~~~~~~~~~~ 416 (420)
+++|.|.+|.+||+.|+|.+|.++.|-.
T Consensus 459 e~kGhLg~GadadIaiYdlnP~~vDps~ 486 (575)
T COG1229 459 ERKGHLGVGADADIAIYDLNPEQVDPSN 486 (575)
T ss_pred cccCccCcCccCceEEEecChhhcCCcc
Confidence 9999999999999999999998766543
No 108
>PF13147 Amidohydro_4: Amidohydrolase; PDB: 3SFW_B 2FTW_A 2PUZ_B 2GOK_B 3HM7_E 3D6N_A 1XRT_A 1XRF_A 1YNY_B 1K1D_F ....
Probab=99.81 E-value=4.7e-19 Score=161.10 Aligned_cols=76 Identities=39% Similarity=0.553 Sum_probs=57.7
Q ss_pred ccHHHHHHcCCcEEEccCCCCCC--CCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcc
Q 014702 314 APIKEMLHADICVSLGTDGAPSN--NRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDI 391 (420)
Q Consensus 314 ~~~~~~~~~gv~~~lgsD~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~ 391 (420)
.+++.+.+.|+.++++||+.+.. ....++..+...... .|+|+++|++++|.|||++||+++++
T Consensus 227 ~~~~~l~~~Gv~~~l~sD~~~~~~~~~~~~~~~~~~~~~~--------------~gl~~~~al~~~T~~pA~~lgl~~~~ 292 (304)
T PF13147_consen 227 AALRELLEAGVPVALGSDHAPSSTEGSGDLLHEAMRLAVR--------------AGLSPEEALRAATSNPARILGLDDDK 292 (304)
T ss_dssp HHHHHHHHTTSSEEEEE-BBTTTTTCTTTHHHHHHHHHHH--------------TSSTHHHHHHHHTHHHHHHTTBTTTS
T ss_pred HHHHHHHhCCCeEEEEcCCcccccccccccchhhhhHHhh--------------cCCCHHHHHHHHHHHHHHHhCCCCCC
Confidence 45678899999999999998752 223344333333222 25999999999999999999998789
Q ss_pred cccccCccccEE
Q 014702 392 GSLEAGKKADMV 403 (420)
Q Consensus 392 G~l~~G~~ADlv 403 (420)
|+|++||+||||
T Consensus 293 G~i~~G~~ADlv 304 (304)
T PF13147_consen 293 GSIAPGKDADLV 304 (304)
T ss_dssp SSTSTTSB-EEE
T ss_pred ccCCCCCCCCcC
Confidence 999999999997
No 109
>cd01292 metallo-dependent_hydrolases Superfamily of metallo-dependent hydrolases (also called amidohydrolase superfamily) is a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The family includes urease alpha, adenosine deaminase, phosphotriesterase dihydroorotases, allantoinases, hydantoinases, AMP-, adenine and cytosine deaminases, imidazolonepropionase, aryldialkylphosphatase, chlorohydrolases, formylmethanofuran dehydrogenases and others.
Probab=99.80 E-value=1.9e-17 Score=148.44 Aligned_cols=259 Identities=24% Similarity=0.356 Sum_probs=172.8
Q ss_pred ccccccccchhhhcccCCCCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCccC--------HHHH
Q 014702 82 FVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH--------VSEM 153 (420)
Q Consensus 82 fID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~~~--------~~~~ 153 (420)
|||+|+|+.....++........ | ......++.+........+++++|||++.+++... ....
T Consensus 1 ~ID~H~H~~~~~~~~~~~~~~~~-~--------~~~~~~~~~~~~~~~~~~~~~~~Gvttv~~~~~~~~~~~~~~~~~~~ 71 (275)
T cd01292 1 FIDTHVHLDGSALRGTRLNLELK-E--------AEELSPEDLYEDTLRALEALLAGGVTTVVDMGSTPPPTTTKAAIEAV 71 (275)
T ss_pred CcccchhhHHHHHccCCCccccc-c--------ccccCHHHHHHHHHHHHHHHHhcCceEEEeeEeecCccccchHHHHH
Confidence 79999999876655432211110 0 33445566666777788999999999999866432 3455
Q ss_pred HHHHHHh-CCeeEeeehhccCCCCCCcccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeeccccc---cCHHHHHHHH
Q 014702 154 AKAVELL-GLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMN---ATDRLLLETR 229 (420)
Q Consensus 154 ~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---~~~~~l~~~~ 229 (420)
.+..... +++............. . .....+...+.+...... +.+. +.+..... .+.+.+..++
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~----~----~~~~~~~~~~~i~~~~~~--~~~g--i~~~~~~~~~~~~~~~~~~~~ 139 (275)
T cd01292 72 AEAARASAGIRVVLGLGIPGVPAA----V----DEDAEALLLELLRRGLEL--GAVG--LKLAGPYTATGLSDESLRRVL 139 (275)
T ss_pred HHHHHHhcCeeeEEeccCCCCccc----c----chhHHHHHHHHHHHHHhc--CCee--EeeCCCCCCCCCCcHHHHHHH
Confidence 6666666 7777655444322110 0 111222223333333221 2222 23333323 3788999999
Q ss_pred HHHHHcCCccceeccCCcchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCCChhhHHHHHhcCCeEEECccchhh
Q 014702 230 DMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMR 309 (420)
Q Consensus 230 ~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 309 (420)
+.++++++++.+|+.+.... ......+++.... +.+.++.|+...+++.++++++.|+.+.+||.++..
T Consensus 140 ~~a~~~~~~i~~H~~~~~~~----------~~~~~~~~~~~~~-~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 208 (275)
T cd01292 140 EEARKLGLPVVIHAGELPDP----------TRALEDLVALLRL-GGRVVIGHVSHLDPELLELLKEAGVSLEVCPLSNYL 208 (275)
T ss_pred HHHHHcCCeEEEeeCCcccC----------ccCHHHHHHHHhc-CCCEEEECCccCCHHHHHHHHHcCCeEEECCccccc
Confidence 99999999999999876532 0112233333322 567889999999999999999999999999988765
Q ss_pred c----cCcccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHH
Q 014702 310 M----LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKS 384 (420)
Q Consensus 310 ~----~~~~~~~~~~~~gv~~~lgsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~ 384 (420)
. ....+++++.+.|+++++|||+++.+...+++..++.+....+ .++|.+++++++|.|||++
T Consensus 209 ~~~~~~~~~~~~~~~~~g~~~~lgTD~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~t~n~a~~ 275 (275)
T cd01292 209 LGRDGEGAEALRRLLELGIRVTLGTDGPPHPLGTDLLALLRLLLKVLR------------LGLSLEEALRLATINPARA 275 (275)
T ss_pred ccCCcCCcccHHHHHHCCCcEEEecCCCCCCCCCCHHHHHHHHHHHHh------------cCCCHHHHHHHHhccccCC
Confidence 3 5567999999999999999999875445678888887755432 1279999999999999974
No 110
>KOG3892 consensus N-acetyl-glucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism]
Probab=99.78 E-value=8.3e-18 Score=138.90 Aligned_cols=338 Identities=16% Similarity=0.144 Sum_probs=176.9
Q ss_pred EEEEecEEEeecCCceeeeceeEEEECCEEEEEcCCh-hhhhhhccCCCcEEeCCCcEEeecccccccccchhhhcccCC
Q 014702 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSA-DILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (420)
Q Consensus 21 ~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~-~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~~~~~~~~~~ 99 (420)
+-+.|++|+.. ..+...++.|++|||..=.+-- +.+ -.++..|||.|+++.|||||..+..+.
T Consensus 14 lQFtNCrilR~----g~l~~edlWVR~GRIldpe~vFFeEr----t~Ad~riDCgG~IlaPGfIDlQiNGGf-------- 77 (407)
T KOG3892|consen 14 LQFTNCRILRG----GKLLREDLWVRGGRILDPEKVFFEER----TVADERIDCGGRILAPGFIDLQINGGF-------- 77 (407)
T ss_pred eeeeeeEEeeC----CceeehheeEeCCeecCcccccceec----cchhheeccCCeeecCceEEEEecCcc--------
Confidence 55889999962 2345679999999997433210 000 036789999999999999999988742
Q ss_pred CCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCC----ccCHHHHHHHH--HHhCCeeEeeehhccC
Q 014702 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG----GQHVSEMAKAV--ELLGLRACLVQSTMDC 173 (420)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~----~~~~~~~~~~~--~~~g~~~~~~~~~~~~ 173 (420)
...-....++.......-.++++++|+|.++... ...+..+.... +..+.+..-......+
T Consensus 78 -------------GvDFS~dte~~~eGvAlVAr~ll~hGvtsf~Pt~~tsp~~~YHkilP~ip~~~~~p~GaG~LG~HlE 144 (407)
T KOG3892|consen 78 -------------GVDFSQDTEDVGEGVALVARQLLSHGVTSFCPTLVTSPPEVYHKILPQIPVKSGGPHGAGVLGLHLE 144 (407)
T ss_pred -------------ccccccchhhhhhhHHHHHHHHHhcCCCcCCCccccCCchhhhhhccccccccCCCCccceeeeecc
Confidence 1122234444444444566889999999987632 11122221111 1112222222344557
Q ss_pred CCCCCcccccCChhHHHHHHH----HHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHcCCccce-eccCCcc
Q 014702 174 GEGLPASWAVRTTDDCIQSQK----ELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHM-HVAEIPY 248 (420)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~-h~~~~~~ 248 (420)
|++++......++..++.... +.+...... -..+++ +.........++.++ ...+.|+.|.+ |......
T Consensus 145 GPFIs~~KrG~HPE~~i~s~~~~~~~~l~~tYGs-leni~I-vTlAPEl~~~~evi~----~lv~~gitVslGHS~A~L~ 218 (407)
T KOG3892|consen 145 GPFISREKRGAHPEAHIRSFEADAFQDLLATYGS-LENIRI-VTLAPELGGAQEVIR----ALVARGITVSLGHSVADLR 218 (407)
T ss_pred CCccChhhcCCCHHHHHhccCccHHHHHHHHhCC-ccceEE-EEecccccCcHHHHH----HHHhcceEEeeccchhccC
Confidence 788877777777777765332 112222111 234554 223222223344443 33444555544 2222222
Q ss_pred hhHHHHh---------------hcCCCCChHHHHHHhccCCCcc----ceeeccCCChhhHHHHHhc---CCeEEECccc
Q 014702 249 ENQVVMD---------------TRKVDHGTVTFLDKIEFLQNNL----LSAHTVWVNHTEIGLLSRA---GVKVSHCPAS 306 (420)
Q Consensus 249 ~~~~~~~---------------~~~~~~~~~~~l~~~~~~~~~~----~~~h~~~~~~~~~~~~~~~---~~~~~~~p~~ 306 (420)
..|.... ++....+.+.++.+-.+.-.+. +++.+.+..+..++...+. |...+.....
T Consensus 219 ~gE~AV~sGat~ITHLFNAMlpfHHRDPGlvGLLtSd~lp~gr~iyyGiIsDG~HThpaALRIAyrthpqGLvLVTDAI~ 298 (407)
T KOG3892|consen 219 AGEDAVWSGATFITHLFNAMLPFHHRDPGLVGLLTSDRLPAGRCIYYGIISDGTHTHPAALRIAYRTHPQGLVLVTDAIP 298 (407)
T ss_pred cHHHHHhccchHHHHHHHhccccccCCCceeEEeecCCCCCCCeEEEEEecCCccCChhHhhhhhhcCCCceEEEecchh
Confidence 2211110 1111111122222111111222 4567777777666544332 4555554444
Q ss_pred hhhc-cCcccHHHH--HHcCC-cEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHH
Q 014702 307 AMRM-LGFAPIKEM--LHADI-CVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGA 382 (420)
Q Consensus 307 ~~~~-~~~~~~~~~--~~~gv-~~~lgsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A 382 (420)
...+ .+...+.+. .-+|. ...-||..... .-..|-.-++.... +.+.|.+.|++++|..||
T Consensus 299 ALGl~~GvH~lGqq~v~Vkgl~A~~aGT~Tl~G-SiApMd~CvRhf~k--------------ATgCs~e~AleaAtlhPA 363 (407)
T KOG3892|consen 299 ALGLGNGVHTLGQQEVEVKGLTAYVAGTKTLSG-SIAPMDVCVRHFLK--------------ATGCSMESALEAATLHPA 363 (407)
T ss_pred hcccccccccccceeEEEcceEEEeeccccccc-cccCcHHHHHHHHH--------------hcCCcHHHHHhhhccChH
Confidence 4332 222222211 11121 12233433221 11122233333221 346999999999999999
Q ss_pred HHccCCCcccccccCccccEEEEcCC
Q 014702 383 KSVLWDNDIGSLEAGKKADMVVVDPF 408 (420)
Q Consensus 383 ~~lgl~~~~G~l~~G~~ADlvv~d~~ 408 (420)
++||+++.+|+|..|.+||||++|.+
T Consensus 364 qlLg~ek~KGTLDfG~dADFVllDd~ 389 (407)
T KOG3892|consen 364 QLLGLEKSKGTLDFGADADFVLLDDS 389 (407)
T ss_pred HhhccccccccccccccCceEEEccc
Confidence 99999999999999999999999976
No 111
>cd01320 ADA Adenosine deaminase (ADA) is a monomeric zinc dependent enzyme which catalyzes the irreversible hydrolytic deamination of both adenosine, as well as desoxyadenosine, to ammonia and inosine or desoxyinosine, respectively. ADA plays an important role in the purine pathway. Low, as well as high levels of ADA activity have been linked to several diseases.
Probab=99.74 E-value=1.3e-15 Score=139.49 Aligned_cols=248 Identities=19% Similarity=0.180 Sum_probs=165.7
Q ss_pred cCCCCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeC--C------ccC--------HHHHHHHHHHh
Q 014702 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEA--G------GQH--------VSEMAKAVELL 160 (420)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~--~------~~~--------~~~~~~~~~~~ 160 (420)
...+.++.+|+....++.......++.+..+.....++++.|||++-.. + +.. .....+...+.
T Consensus 45 ~~~~~~l~~~l~~~~~~~~~~~~~ed~~~~~~~~~~e~~~~Gvt~~E~~~~p~~~~~~~~~~~~~~~~~~~ai~~~~~~~ 124 (325)
T cd01320 45 AYNFSDLQDFLAKYDFGLSVLQTEEDFERLAYEYLEDAAADGVVYAEIRFSPQLHTRRGLSFDEVVEAVLRGLDEAEAEF 124 (325)
T ss_pred cccCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCEEEEEEeCchhhccCCCCHHHHHHHHHHHHHHHHHhc
Confidence 3456667788888878777777888888888889999999999965211 1 011 12334444556
Q ss_pred CCeeEeeehhccCCCCCCcccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHcCCccc
Q 014702 161 GLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIH 240 (420)
Q Consensus 161 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~ 240 (420)
|++..+....... . ......+..+...++.. +..+++.+.... ...+.+.+..+++.|+++|+++.
T Consensus 125 gi~~~l~~~~~~~---~--------~~~~~~~~~~~~~~~~~--~~vvg~~l~~~~-~~~~~~~~~~~~~~A~~~g~~v~ 190 (325)
T cd01320 125 GIKARLILCGLRH---L--------SPESAQETLELALKYRD--KGVVGFDLAGDE-VGFPPEKFVRAFQRAREAGLRLT 190 (325)
T ss_pred CCeEEEEEEecCC---C--------CHHHHHHHHHHHHhccC--CCEEEeecCCCC-CCCCHHHHHHHHHHHHHCCCceE
Confidence 8887654433211 0 11223333333333322 233443332222 23377889999999999999999
Q ss_pred eeccCCcchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCCC--hhhHHHHHhcCCeEEECccchhhcc-----Cc
Q 014702 241 MHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN--HTEIGLLSRAGVKVSHCPASAMRML-----GF 313 (420)
Q Consensus 241 ~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~--~~~~~~~~~~~~~~~~~p~~~~~~~-----~~ 313 (420)
+|+.+.....+.. .+++..+. ..+.|+.+++ +++++++++.|+.+++||.++.... ..
T Consensus 191 ~H~~E~~~~~~~~-----------~a~~~~g~----~~i~H~~~l~~~~~~~~~l~~~gi~v~~~P~sn~~l~~~~~~~~ 255 (325)
T cd01320 191 AHAGEAGGPESVR-----------DALDLLGA----ERIGHGIRAIEDPELVKRLAERNIPLEVCPTSNVQTGAVKSLAE 255 (325)
T ss_pred EeCCCCCCHHHHH-----------HHHHHcCC----cccchhhccCccHHHHHHHHHcCCeEEECCCccccccccCCccc
Confidence 9999864322111 11222221 2478999995 5689999999999999999987652 25
Q ss_pred ccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCC
Q 014702 314 APIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDN 389 (420)
Q Consensus 314 ~~~~~~~~~gv~~~lgsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~ 389 (420)
+|++++++.|+++++|||.++... .+++.++..+.... ++++++ +..+|.|+++...+.+
T Consensus 256 ~p~~~l~~~Gv~v~lgTD~~~~~~-~~~~~e~~~~~~~~--------------~l~~~e-l~~~~~na~~~~f~~~ 315 (325)
T cd01320 256 HPLRELLDAGVKVTINTDDPTVFG-TYLTDEYELLAEAF--------------GLTEEE-LKKLARNAVEASFLSE 315 (325)
T ss_pred ChHHHHHHCCCEEEECCCCCcccC-CCHHHHHHHHHHHc--------------CCCHHH-HHHHHHHHHHHhCCCH
Confidence 899999999999999999876543 57888888875432 499999 5668899999887643
No 112
>PRK09358 adenosine deaminase; Provisional
Probab=99.72 E-value=3.5e-15 Score=137.25 Aligned_cols=250 Identities=18% Similarity=0.169 Sum_probs=169.1
Q ss_pred cccCCCCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeee---CC-----ccC--------HHHHHHHHH
Q 014702 95 KGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAE---AG-----GQH--------VSEMAKAVE 158 (420)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~---~~-----~~~--------~~~~~~~~~ 158 (420)
++...+.++.+|+....|+.....+.++.+..+.....++++.|||++-. .. +.. .....++..
T Consensus 51 r~~~~~~~l~~~l~~~~~~~~~~~t~ed~~~~~~~~~~e~~~~Gvty~E~~~~p~~~~~~gl~~~~~~~a~~~~~~~a~~ 130 (340)
T PRK09358 51 RAAYDFRDLQSFLDKYDAGVAVLQTEEDLRRLAFEYLEDAAADGVVYAEIRFDPQLHTERGLPLEEVVEAVLDGLRAAEA 130 (340)
T ss_pred cccccCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCEEEEEEeChhhhhhcCCCHHHHHHHHHHHHHHHHH
Confidence 34445667888998888887777888888888888999999999997522 11 011 123344555
Q ss_pred HhCCeeEeeehhccCCCCCCcccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeeccc-cccCHHHHHHHHHHHHHcCC
Q 014702 159 LLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQI-MNATDRLLLETRDMAREFKT 237 (420)
Q Consensus 159 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~l~~~~~~a~~~~~ 237 (420)
+.|++..+....... . ...........++..+. +...+++ ++.+. ...+++.+..+++.|++.|+
T Consensus 131 ~~gi~~~li~~~~r~---~-------~~~~~~~~~~~~~~~~~--~~~vvg~--~l~g~e~~~~~~~~~~~~~~A~~~g~ 196 (340)
T PRK09358 131 EFGISVRLILCFMRH---F-------GEEAAARELEALAARYR--DDGVVGF--DLAGDELGFPPSKFARAFDRARDAGL 196 (340)
T ss_pred hcCceEEEEEEecCC---C-------CHHHHHHHHHHHHHHhc--CCcEEEE--eCCCcCCCCCHHHHHHHHHHHHHCCC
Confidence 668887665544321 1 11122223333333322 2234443 33322 34577889999999999999
Q ss_pred ccceeccCCcchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCCC--hhhHHHHHhcCCeEEECccchhhcc----
Q 014702 238 GIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN--HTEIGLLSRAGVKVSHCPASAMRML---- 311 (420)
Q Consensus 238 ~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~--~~~~~~~~~~~~~~~~~p~~~~~~~---- 311 (420)
++++|+.+.....+.. ..+...+ . ..+.|+.+++ ++.++++++.|+.+.+||.++....
T Consensus 197 ~~~~H~~E~~~~~~~~-----------~al~~lg---~-~ri~Hg~~l~~~~~~~~~l~~~gi~v~~cP~Sn~~l~~~~~ 261 (340)
T PRK09358 197 RLTAHAGEAGGPESIW-----------EALDELG---A-ERIGHGVRAIEDPALMARLADRRIPLEVCPTSNVQTGAVPS 261 (340)
T ss_pred CeEEcCCCCCchhHHH-----------HHHHHcC---C-cccchhhhhccCHHHHHHHHHcCCeEEECCCccccccccCC
Confidence 9999999864322111 1122222 1 2368999985 5569999999999999999997652
Q ss_pred -CcccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCC
Q 014702 312 -GFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDN 389 (420)
Q Consensus 312 -~~~~~~~~~~~gv~~~lgsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~ 389 (420)
+..|++++.+.|+++++|||.+...+ .+++++++.+.... ++++++ +..++.|+.+...+++
T Consensus 262 ~~~~pi~~l~~~Gv~v~lgTD~~~~~~-~~l~~e~~~~~~~~--------------~l~~~e-l~~l~~nai~~sf~~~ 324 (340)
T PRK09358 262 LAEHPLKTLLDAGVRVTINTDDPLVFG-TTLTEEYEALAEAF--------------GLSDED-LAQLARNALEAAFLSE 324 (340)
T ss_pred cccChHHHHHHCCCEEEECCCCCcccC-CCHHHHHHHHHHHh--------------CCCHHH-HHHHHHHHHHHHCCCH
Confidence 45899999999999999999976543 58999988875532 499999 5777899988877643
No 113
>TIGR01430 aden_deam adenosine deaminase. This family includes the experimentally verified adenosine deaminases of mammals and E. coli. Other members of this family are predicted also to be adenosine deaminase, an enzyme of nucleotide degradation. This family is distantly related to AMP deaminase.
Probab=99.70 E-value=5.3e-15 Score=135.10 Aligned_cols=243 Identities=19% Similarity=0.224 Sum_probs=164.8
Q ss_pred CCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCC-cc--------C--------HHHHHHHHHHhCC
Q 014702 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG-GQ--------H--------VSEMAKAVELLGL 162 (420)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~-~~--------~--------~~~~~~~~~~~g~ 162 (420)
..++.+|+....|+.....+.++.+..+.....++++.||| +.++. .+ . ...+.++..+.|+
T Consensus 47 ~~~l~~~l~~~~~~~~~~~t~e~l~~~~~~~~~e~~~~Gv~-y~E~r~~p~~~~~~g~~~~~~~~~~~~~i~~a~~~~gi 125 (324)
T TIGR01430 47 FRDLQDFLAKYDFGVEVLRTEDDFKRLAYEYVEKAAKDGVV-YAEVFFDPQLHTNRGISPDTVVEAVLDGLDEAERDFGI 125 (324)
T ss_pred CCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCE-EEEEEeCccccccCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 34677888888888777777888888888899999999995 44431 01 1 1133444556788
Q ss_pred eeEeeehhccCCCCCCcccccCChhHHHHHHHHHHHHhcCCCCCceEEEEeecc-ccccCHHHHHHHHHHHHHcCCccce
Q 014702 163 RACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQ-IMNATDRLLLETRDMAREFKTGIHM 241 (420)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~l~~~~~~a~~~~~~v~~ 241 (420)
+..+........ ......+..+...++.. ...++ +++.+ ....+.+.+..+.+.|+++|+++.+
T Consensus 126 ~~~li~~~~r~~-----------~~~~~~~~~~~~~~~~~--~~vvg--~~l~~~e~~~~~~~~~~~~~~A~~~g~~i~~ 190 (324)
T TIGR01430 126 KSRLILCGMRHK-----------QPEAAEETLELAKPYKE--QTIVG--FGLAGDERGGPPPDFVRAFAIARELGLHLTV 190 (324)
T ss_pred eEEEEEEEeCCC-----------CHHHHHHHHHHHHhhcc--CcEEE--ecCCCCCCCCCHHHHHHHHHHHHHCCCCeEE
Confidence 775544443211 11222333333223221 12333 33332 2345688899999999999999999
Q ss_pred eccCCcchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCC--ChhhHHHHHhcCCeEEECccchhhcc-----Ccc
Q 014702 242 HVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV--NHTEIGLLSRAGVKVSHCPASAMRML-----GFA 314 (420)
Q Consensus 242 h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~--~~~~~~~~~~~~~~~~~~p~~~~~~~-----~~~ 314 (420)
|+.+.....+. ...+...+. ..+.|+.++ +++++++++++|+.+.+||.+++... ..+
T Consensus 191 Ha~E~~~~~~~-----------~~~~~~~g~----~ri~Hg~~l~~~~~~i~~l~~~gi~v~~cP~Sn~~l~~~~~~~~~ 255 (324)
T TIGR01430 191 HAGELGGPESV-----------REALDDLGA----TRIGHGVRALEDPELLKRLAQENITLEVCPTSNVALGVVKSLAEH 255 (324)
T ss_pred ecCCCCChHHH-----------HHHHHHcCc----hhcchhhhhccCHHHHHHHHHcCceEEECCcccccccccCCcccC
Confidence 99986322111 111222222 247899999 56689999999999999999997653 268
Q ss_pred cHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCC
Q 014702 315 PIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDN 389 (420)
Q Consensus 315 ~~~~~~~~gv~~~lgsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~ 389 (420)
|+++++++|+++++|||.+...+. +++.++..+.... ++|+++ ++++|.|+++.+.+++
T Consensus 256 pi~~l~~~Gv~v~igTD~~~~~~~-~l~~e~~~a~~~~--------------~l~~~e-l~~~~~na~~~~f~~~ 314 (324)
T TIGR01430 256 PLRRFLEAGVKVTLNSDDPAYFGS-YLTEEYEIAAKHA--------------GLTEEE-LKQLARNALEGSFLSD 314 (324)
T ss_pred hHHHHHHCCCEEEECCCCCcccCC-CHHHHHHHHHHHc--------------CCCHHH-HHHHHHHHHHHhCCCH
Confidence 999999999999999998765443 8999988875432 499999 8899999999988753
No 114
>PF13594 Amidohydro_5: Amidohydrolase; PDB: 4F0R_A 4F0S_A 1NFG_C 2FVM_A 2FVK_A 2FTY_D 1YBQ_B 1POJ_B 1ONW_A 2AQO_B ....
Probab=99.57 E-value=5e-15 Score=101.29 Aligned_cols=44 Identities=27% Similarity=0.643 Sum_probs=34.7
Q ss_pred EEEECCEEEEEcCChhhhhhhccCCCcEEeCCCcEEeecccccccccc
Q 014702 43 VFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTS 90 (420)
Q Consensus 43 I~I~~G~I~~vg~~~~~~~~~~~~~~~~iD~~g~~v~PGfID~H~H~~ 90 (420)
|+|+||||++|++....+ ....++||++|++|+|||||+|+|+.
T Consensus 1 V~I~~g~I~~v~~~~~~~----~~~~~viD~~g~~v~PG~ID~H~H~~ 44 (68)
T PF13594_consen 1 VLIEDGKIVAVGPDSELP----ADAAEVIDAKGKYVMPGFIDMHTHLG 44 (68)
T ss_dssp EEEETTEEEEEESSCCTT----STCCEEEEETTCEEEE-EEEEEE-TT
T ss_pred CEEECCEEEEeCCCCCCC----CCCCEEEECCCCEEeCCeEeeeeccc
Confidence 789999999996654432 24668999999999999999999984
No 115
>cd01294 DHOase Dihydroorotase (DHOase) catalyzes the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in the pyrimidine biosynthesis. In contrast to the large polyfunctional CAD proteins of higher organisms, this group of DHOases is monofunctional and mainly dimeric.
Probab=99.52 E-value=2e-12 Score=118.63 Aligned_cols=161 Identities=9% Similarity=0.032 Sum_probs=95.9
Q ss_pred CHHHHHHHHHHHHHcCCccceeccCCcchhH-HHHhhcCCCCChHHHHHHhc-cCCCccceeeccCCChhhHHHHHhc--
Q 014702 221 TDRLLLETRDMAREFKTGIHMHVAEIPYENQ-VVMDTRKVDHGTVTFLDKIE-FLQNNLLSAHTVWVNHTEIGLLSRA-- 296 (420)
Q Consensus 221 ~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~h~~~~~~~~~~~~~~~-- 296 (420)
+...+.++.+.+.+.|++|.+|+........ ...+. .....+..... ..+.+..+.|.. +.+.++.+++.
T Consensus 111 d~~~l~~~~e~~~~~g~~V~vHaE~~~l~~~~~~~e~----~~~~~~~~lA~~~p~~~v~i~Hvs--t~~~~~~i~~ak~ 184 (335)
T cd01294 111 DLEKIYPVLEAMQKLGMPLLVHGEVPDFKIDVLDREA----KFIPVLEPLAQRFPKLKIVLEHIT--TADAVEYVKSCNE 184 (335)
T ss_pred CHHHHHHHHHHHHHcCCeEEEecCCCcccccchhhHH----HHHHHHHHHHHHcCCCeEEEeccc--HHHHHHHHHhCCC
Confidence 4567888999999999999999976543110 00000 00011122222 224455566664 45566666544
Q ss_pred CCeEEECccchhhc-------------cCcccHH---------HHHHcCCcE-EEccCCCCCCC----------CCCHHH
Q 014702 297 GVKVSHCPASAMRM-------------LGFAPIK---------EMLHADICV-SLGTDGAPSNN----------RMSIVD 343 (420)
Q Consensus 297 ~~~~~~~p~~~~~~-------------~~~~~~~---------~~~~~gv~~-~lgsD~~~~~~----------~~~~~~ 343 (420)
.+.+.+||.+.... .-.+|++ +.++.|... .++|||+|+.. ++..++
T Consensus 185 ~vt~Et~ph~L~l~~~~~~~~~~g~~~k~~PPlR~~~d~~~L~~~l~~G~id~~i~SDHaP~~~~~K~~~~g~~Gi~~~~ 264 (335)
T cd01294 185 NVAATITPHHLLLTRDDLLGGGLNPHLYCKPVAKRPEDREALRKAATSGHPKFFLGSDSAPHPKSNKESSCGCAGIFSAP 264 (335)
T ss_pred CcEEEEchhHheeeHHHhcCCCCCCCeEEcCCCCCHHHHHHHHHHHHcCCCCeEEECCCCCCCCccccCCCCCccccCHH
Confidence 58888898753210 1134444 456779888 59999988631 112222
Q ss_pred HHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCc
Q 014702 344 EMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGK 398 (420)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~ 398 (420)
.+.... +.. . . .++|++++++.++.||||++|+.+++|+|.+|.
T Consensus 265 ~~l~~~-~~~-~--------~-~~l~l~~~v~~~s~nPA~i~gl~~~kg~i~~~~ 308 (335)
T cd01294 265 IALPYL-AEV-F--------E-EHNALDKLEAFASDNGPNFYGLPPNKKTITLVK 308 (335)
T ss_pred HHHHHH-HHH-H--------h-ccCCHHHHHHHHHhHHHHHhCCCCCCCeEEEEe
Confidence 111111 110 0 1 259999999999999999999987778888776
No 116
>cd01316 CAD_DHOase The eukaryotic CAD protein is a trifunctional enzyme of carbamoylphosphate synthetase-aspartate transcarbamoylase-dihydroorotase, which catalyzes the first three steps of de novo pyrimidine nucleotide biosynthesis. Dihydroorotase (DHOase) catalyzes the third step, the reversible interconversion of carbamoyl aspartate to dihydroorotate.
Probab=99.45 E-value=7.9e-12 Score=114.00 Aligned_cols=36 Identities=17% Similarity=0.082 Sum_probs=30.2
Q ss_pred CCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEcCCC
Q 014702 366 AALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVDPFS 409 (420)
Q Consensus 366 ~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d~~~ 409 (420)
.++++.++++.+|.|||+++|+..+ .+||+|+|++.
T Consensus 259 ~~i~l~~l~~~~s~nPAk~~gl~~~--------~~~lvi~d~~~ 294 (344)
T cd01316 259 GRLTIEDIVDRLHTNPKRIFNLPPQ--------SDTYVEVDLDE 294 (344)
T ss_pred CCCCHHHHHHHHHHhHHHHhCCCCC--------CCCEEEEeCCC
Confidence 3599999999999999999999542 33799999874
No 117
>cd00443 ADA_AMPD Adenosine/AMP deaminase. Adenosine deaminases (ADAs) are present in pro- and eukaryotic organisms and catalyze the zinc dependent irreversible deamination of adenosine nucleosides to inosine nucleosides and ammonia. The eukaryotic AMP deaminase catalyzes a similar reaction leading to the hydrolytic removal of an amino group at the 6 position of the adenine nucleotide ring, a branch point in the adenylate catabolic pathway.
Probab=99.21 E-value=3.1e-09 Score=95.93 Aligned_cols=136 Identities=21% Similarity=0.245 Sum_probs=102.8
Q ss_pred CHHHHHHHHHHHHHcC-CccceeccCCcchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCCCh--hhHHHHHhcC
Q 014702 221 TDRLLLETRDMAREFK-TGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH--TEIGLLSRAG 297 (420)
Q Consensus 221 ~~~~l~~~~~~a~~~~-~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~--~~~~~~~~~~ 297 (420)
....+....+.+++.| +++.+|+.+..... ...+....+ ...+.|+..+.+ +.++++++++
T Consensus 151 ~~~~f~~~~~~ar~~g~l~~t~HaGE~~~~~--------------~v~~~~~~~--~~RIgHg~~~~~~p~~~~~l~~~~ 214 (305)
T cd00443 151 PLRDFYSYYEYARRLGLLGLTLHCGETGNRE--------------ELLQALLLL--PDRIGHGIFLLKHPELIYLVKLRN 214 (305)
T ss_pred CHHHHHHHHHHHHHcCCcceEEeecCCCChH--------------HHHHHHHhc--cceeeceEecCCCHHHHHHHHHcC
Confidence 5678888999999999 99999999863321 112222222 456899999887 8899999999
Q ss_pred CeEEECccchhhccC-----cccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHH
Q 014702 298 VKVSHCPASAMRMLG-----FAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAET 372 (420)
Q Consensus 298 ~~~~~~p~~~~~~~~-----~~~~~~~~~~gv~~~lgsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~ 372 (420)
+.+.+||.+|..... ..|++++++.|++++++||.+...+. ++.+++..+.... ++|.++
T Consensus 215 i~ie~CP~SN~~~~~~~~~~~hP~~~~~~~G~~v~i~TDd~~~~~~-~l~~E~~~~~~~~--------------~l~~~~ 279 (305)
T cd00443 215 IPIEVCPTSNVVLGTVQSYEKHPFMRFFKAGLPVSLSTDDPGIFGT-SLSEEYSLAAKTF--------------GLTFED 279 (305)
T ss_pred CEEEECcchhhhhcCCCChhhChHHHHHHCCCeEEEeCCCCcccCC-ChHHHHHHHHHHc--------------CcCHHH
Confidence 999999999977633 37999999999999999999875443 7888888775432 388888
Q ss_pred HHHHHhHHHHHHccCC
Q 014702 373 VLRMATINGAKSVLWD 388 (420)
Q Consensus 373 al~~~T~~~A~~lgl~ 388 (420)
..+ +..|+-+...++
T Consensus 280 l~~-l~~nsi~~sf~~ 294 (305)
T cd00443 280 LCE-LNRNSVLSSFAK 294 (305)
T ss_pred HHH-HHHHHHHHhcCC
Confidence 554 456776666553
No 118
>cd00530 PTE Phosphotriesterase (PTE) catalyzes the hydrolysis of organophosphate nerve agents, including the chemical warfare agents VX, soman, and sarin as well as the insecticide paraoxon. PTE exists as a homodimer with one active site per monomer. The active site is located next to a binuclear metal center, at the C-terminal end of a TIM alpha- beta barrel motif. The native enzyme contains two zinc ions at the active site however these can be replaced with other metals such as cobalt, cadmium, nickel or manganese and the enzyme remains active.
Probab=99.10 E-value=3.2e-08 Score=89.43 Aligned_cols=241 Identities=10% Similarity=0.009 Sum_probs=130.7
Q ss_pred HHHHHHHHHHHHHHhCCcceeeeCCcc----CHHHHHHHHHHhCCeeEeeehhccCCCCCCcccccCChhHHHHHHHHHH
Q 014702 122 DSYISTLLCGIELIHSGVTCFAEAGGQ----HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELY 197 (420)
Q Consensus 122 ~~~~~~~~~~~~~~~~Gvtt~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (420)
+.+..+...+.++.+.|+|++++.+.. ......+.++..+++.+....+..... .+............+...+.+
T Consensus 29 ~~~~~~~~~~~~~~~~Gvttiv~~~~~~~~~~~~~~~~~~~~~g~~v~~~~G~hp~~~-~~~~~~~~~~~~l~~~~~~~l 107 (293)
T cd00530 29 ADVEAAKEELKRFRAHGGRTIVDATPPGIGRDVEKLAEVARATGVNIVAATGFYKDAF-YPEWVRLRSVEELTDMLIREI 107 (293)
T ss_pred hhHHHHHHHHHHHHHcCCCeEEEcCCcccCcCHHHHHHHHHHhCCcEEEecccCCCcc-ChHHHhhCCHHHHHHHHHHHH
Confidence 345566667888999999999998743 345666777778877665444332110 000000111111111111111
Q ss_pred HHhcCCCC---CceEEEEeecc-ccccCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCChHHHHHHhccC
Q 014702 198 AKHHHAAD---GRIRIWFGIRQ-IMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFL 273 (420)
Q Consensus 198 ~~~~~~~~---~~i~~~~~~~~-~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 273 (420)
........ +.++- ++... ......+.++..+++|++.+++|++|+...... ....+..+...+..
T Consensus 108 ~~~~~~~~i~~~~IGE-igld~~~~~~q~~~f~~~~~lA~~~~~Pv~iH~~~~~~~----------~~~~l~~l~~~g~~ 176 (293)
T cd00530 108 EEGIEGTGIKAGIIKE-AGGSPAITPLEEKVLRAAARAQKETGVPISTHTQAGLTM----------GLEQLRILEEEGVD 176 (293)
T ss_pred HhccccCCcCceEEEE-eecCCCCCHHHHHHHHHHHHHHHHHCCeEEEcCCCCccc----------cHHHHHHHHHcCCC
Confidence 11111110 11222 22221 222233467889999999999999999763111 01133344444444
Q ss_pred CCccceeeccC-CChhhHHHHHhcCCeEEECccchhh---c----cCcccHHHHHHcCC--cEEEccCCCCCCCC-----
Q 014702 274 QNNLLSAHTVW-VNHTEIGLLSRAGVKVSHCPASAMR---M----LGFAPIKEMLHADI--CVSLGTDGAPSNNR----- 338 (420)
Q Consensus 274 ~~~~~~~h~~~-~~~~~~~~~~~~~~~~~~~p~~~~~---~----~~~~~~~~~~~~gv--~~~lgsD~~~~~~~----- 338 (420)
..+.++.|+.. -+.+.+..+.+.|..+.++...... . .....++++++.|. .+.++||.+.....
T Consensus 177 ~~~~vi~H~~~~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~ill~TD~p~~~~~~~~~~ 256 (293)
T cd00530 177 PSKVVIGHLDRNDDPDYLLKIAALGAYLEFDGIGKDKIFGYPSDETRADAVKALIDEGYGDRLLLSHDVFRKSYLEKRYG 256 (293)
T ss_pred hhheEEeCCCCCCCHHHHHHHHhCCCEEEeCCCCcccccCCCCHHHHHHHHHHHHHCCCcCCEEEeCCcCchhhhhhccC
Confidence 44557889984 4678889999999887766432111 0 01223667778875 67999998642110
Q ss_pred -CCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHc
Q 014702 339 -MSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSV 385 (420)
Q Consensus 339 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~l 385 (420)
..+...+....... ...+++.+++.++.+.||++++
T Consensus 257 ~~~~~~~~~~~~~~~-----------~~~g~~~e~i~~~~~~N~~~lf 293 (293)
T cd00530 257 GHGYDYILTRFIPRL-----------RERGVTEEQLDTILVENPARFL 293 (293)
T ss_pred CCChHHHHHHHHHHH-----------HHcCCCHHHHHHHHHHCHHHhC
Confidence 01111111111111 1236999999999999999875
No 119
>PRK05451 dihydroorotase; Provisional
Probab=99.02 E-value=5.3e-08 Score=89.46 Aligned_cols=163 Identities=13% Similarity=0.121 Sum_probs=94.9
Q ss_pred CHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCChHHHHH-Hh-ccCCCccceeeccCCChhhHHHHHhc--
Q 014702 221 TDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLD-KI-EFLQNNLLSAHTVWVNHTEIGLLSRA-- 296 (420)
Q Consensus 221 ~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~-~~-~~~~~~~~~~h~~~~~~~~~~~~~~~-- 296 (420)
+++.+.++++.+.+.|+++.+|+............ ........+. .. ...+.+..+.|.. +.+.++.+++.
T Consensus 116 dd~~l~~~~e~~~~~g~~V~vHaE~~~~~~~~~~~---e~~~~~~~l~~lA~~~pg~~lhI~Hls--t~~~~e~i~~a~~ 190 (345)
T PRK05451 116 DIEKIYPVLEAMQKLGMPLLVHGEVTDPDIDIFDR---EAVFIDRVLEPLRRRFPKLKIVFEHIT--TKDAVDYVREAND 190 (345)
T ss_pred CHHHHHHHHHHHHHcCCEEEEecCCCCcccccccc---hHHHHHHHHHHHHHhcCCCcEEEEecC--cHHHHHHHHhcCC
Confidence 56788889999999999999999763321100000 0000001111 11 1224555666664 45566666543
Q ss_pred CCeEEECccchhhc-------------cCcccHH---------HHHHcCCcE-EEccCCCCCCC-------CC-CHHHHH
Q 014702 297 GVKVSHCPASAMRM-------------LGFAPIK---------EMLHADICV-SLGTDGAPSNN-------RM-SIVDEM 345 (420)
Q Consensus 297 ~~~~~~~p~~~~~~-------------~~~~~~~---------~~~~~gv~~-~lgsD~~~~~~-------~~-~~~~~~ 345 (420)
++.+.+||...... .-.+|++ +.+..|... +++|||+|+.. +. .++...
T Consensus 191 ~it~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aLw~~l~~G~Id~~i~SDHaP~~~~~K~~~~G~~gi~~~~ 270 (345)
T PRK05451 191 NLAATITPHHLLINRNDMLVGGIRPHLYCLPILKRETHRQALREAATSGNPKFFLGTDSAPHARHAKESACGCAGIFSAP 270 (345)
T ss_pred CEEEEecHHHHhcCHHHHhCCCcCCCeEEeCCCCCHHHHHHHHHHHHcCCCCEEEeCCCCCCChHHhCCCCCCCchhhHH
Confidence 56677888753210 1123443 466789888 79999998631 11 222211
Q ss_pred HHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccC
Q 014702 346 YLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAG 397 (420)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G 397 (420)
....++.. .+ . .+.++++++++++.||||++|+..++|+|.+|
T Consensus 271 ~g~~~~~~---~~-----~-~~~~l~~~v~~~s~nPAkifGl~~~KG~i~~~ 313 (345)
T PRK05451 271 AALELYAE---VF-----E-EAGALDKLEAFASLNGPDFYGLPRNTDTITLV 313 (345)
T ss_pred HHHHHHHH---HH-----H-cCCCHHHHHHHHhHHHHHHhCCCCCCCeEEEE
Confidence 00001110 01 0 12489999999999999999999899999998
No 120
>TIGR00856 pyrC_dimer dihydroorotase, homodimeric type. This homodimeric form of dihydroorotase is less common in microbial genomes than a related dihydroorotase that appears in a complex with aspartyltranscarbamoylase or as a homologous domain in multifunctional proteins of pyrimidine biosynthesis in higher eukaryotes.
Probab=98.99 E-value=1.1e-07 Score=87.06 Aligned_cols=162 Identities=14% Similarity=0.127 Sum_probs=92.6
Q ss_pred CHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCChHHHHHH--hccCCCccceeeccCCChhhHHHHHhc--
Q 014702 221 TDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDK--IEFLQNNLLSAHTVWVNHTEIGLLSRA-- 296 (420)
Q Consensus 221 ~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~h~~~~~~~~~~~~~~~-- 296 (420)
+...+..+.+.+++.|+++.+|+............ ........+.. ....+.+..+.|.. +.+.++.+++.
T Consensus 113 dd~~l~~~~e~~~e~g~~v~vHaEd~~~~i~~~~~---e~~a~~~~i~~lA~~~~~~~~~i~H~s--t~~~~~~i~~a~~ 187 (341)
T TIGR00856 113 DIDAIMPVLEAMEKIGLPLLLHGEVTHGDIDIFDR---EARFIESVLEPLRQRFPALKVVLEHIT--TKDAIDYVEDGNN 187 (341)
T ss_pred CHHHHHHHHHHHHHcCCeEEEeecCCCCCcccccc---hhhhhHHHHHHHHHHccCCeEEEEecC--cHHHHHHHHHcCC
Confidence 44678889999999999999999764211100000 00001111111 12224444455553 34555555443
Q ss_pred CCeEEECccchhhc-------------cCcccHH---------HHHHcCCcE-EEccCCCCCCC----------CCCHHH
Q 014702 297 GVKVSHCPASAMRM-------------LGFAPIK---------EMLHADICV-SLGTDGAPSNN----------RMSIVD 343 (420)
Q Consensus 297 ~~~~~~~p~~~~~~-------------~~~~~~~---------~~~~~gv~~-~lgsD~~~~~~----------~~~~~~ 343 (420)
.+.+.+||.+.... .-.+|++ +.+.+|... +++|||+|+.. ++.-.+
T Consensus 188 ~vt~E~~ph~L~l~~~~~~~~~~~~~~k~~PPlR~~~d~~aL~~~l~~G~id~~i~SDHaP~~~~~K~~~~~~~G~~g~e 267 (341)
T TIGR00856 188 RLAATITPQHLMFTRNDLLGGGVNPHLYCLPILKRNIHQQALLELAASGFPKFFLGTDSAPHARHRKESSCGCAGCFSAP 267 (341)
T ss_pred CEEEEEcHHHHhccHHHHhccCCCCceEEeCCCCCHHHHHHHHHHHHcCCCCEEEeCCCCCCChhHcCCCCCCCCcccHH
Confidence 36677888653210 1123443 456789888 69999998631 111112
Q ss_pred HHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCccccEEEEc
Q 014702 344 EMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKADMVVVD 406 (420)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~~ADlvv~d 406 (420)
.. ...+.. .+ ..++|++++++++|.||||++|+ ++ | +|||+|++
T Consensus 268 ~~-l~~~~~----~~------~~~~~l~~~v~~~s~nPAk~~gl-~~-~------dAdi~~~~ 311 (341)
T TIGR00856 268 TA-LPSYAE----VF------EEMNALENLEAFCSDNGPQFYGL-PV-N------STKIELVK 311 (341)
T ss_pred HH-HHHHHH----HH------hcCCCHHHHHHHHhHhHHHHhCC-CC-C------CceEEEEe
Confidence 11 111111 00 12489999999999999999999 43 4 89999995
No 121
>PTZ00124 adenosine deaminase; Provisional
Probab=98.98 E-value=2.5e-07 Score=84.64 Aligned_cols=146 Identities=15% Similarity=0.158 Sum_probs=100.4
Q ss_pred EeeccccccCHHHHHHHHHHHHHcCCccceeccCCc--chhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCCC--h
Q 014702 212 FGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIP--YENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN--H 287 (420)
Q Consensus 212 ~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~--~ 287 (420)
+++.+.... ...+..+++.|++.|+++.+|+.|.. ..... ..+.+...+ ...+.||..+. +
T Consensus 196 iDLaG~E~~-~~~f~~~f~~Ar~~Gl~~t~HaGE~~~~~~~~~----------v~~ai~~l~----~~RIGHG~~~~~d~ 260 (362)
T PTZ00124 196 FDHAGHEVD-LKPFKDIFDYVREAGVNLTVHAGEDVTLPNLNT----------LYSAIQVLK----VKRIGHGIRVAESQ 260 (362)
T ss_pred EeccCCCCC-cHHHHHHHHHHHHCCCCEEEEeCCCCCCCcchh----------HHHHHHHhC----CCccccccccCCCH
Confidence 444443322 24577888999999999999999852 11000 111122222 23478999874 6
Q ss_pred hhHHHHHhcCCeEEECccchhhccC-----cccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCC
Q 014702 288 TEIGLLSRAGVKVSHCPASAMRMLG-----FAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGT 362 (420)
Q Consensus 288 ~~~~~~~~~~~~~~~~p~~~~~~~~-----~~~~~~~~~~gv~~~lgsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (420)
+.+++++++++.+.+||.+|..... ..|++++++.|++++++||.+...+ .++.+++..+...
T Consensus 261 ~l~~~l~~~~I~lEvCPtSN~~~~~v~~~~~HPi~~l~~~Gv~v~InTDDp~~~~-t~l~~Ey~~~~~~----------- 328 (362)
T PTZ00124 261 ELIDMVKEKDILLEVCPISNVLLNNAKSMDTHPIRKLYDAGVKVSVNSDDPGMFL-TNINDDYEELYTH----------- 328 (362)
T ss_pred HHHHHHHHcCCeEEECCcchhhhhcCCchhhHHHHHHHHCCCcEEEeCCCccccC-CChhHHHHHHHHH-----------
Confidence 7789999999999999999976532 3689999999999999999986533 3566776655332
Q ss_pred CCCCCCCHHHHHHHHhHHHHHHccCC
Q 014702 363 TDPAALPAETVLRMATINGAKSVLWD 388 (420)
Q Consensus 363 ~~~~~ls~~~al~~~T~~~A~~lgl~ 388 (420)
.++|.+++.++ +.|+.+...++
T Consensus 329 ---~gls~~~l~~l-~~nai~asF~~ 350 (362)
T PTZ00124 329 ---LNFTLADFMKM-NEWALEKSFLD 350 (362)
T ss_pred ---cCCCHHHHHHH-HHHHHHHhcCC
Confidence 25999886665 67776766554
No 122
>cd01321 ADGF Adenosine deaminase-related growth factors (ADGF), a novel family of secreted growth-factors with sequence similarty to adenosine deaminase.
Probab=98.89 E-value=3.9e-07 Score=83.30 Aligned_cols=155 Identities=14% Similarity=0.135 Sum_probs=104.3
Q ss_pred Eeecccc--ccCHHHHHHHHHHHHHcC--CccceeccCCcchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCCC-
Q 014702 212 FGIRQIM--NATDRLLLETRDMAREFK--TGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN- 286 (420)
Q Consensus 212 ~~~~~~~--~~~~~~l~~~~~~a~~~~--~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~- 286 (420)
+++.+.. ....+.+..+++.+++.| +++.+|+.|...... .....+.+++ .+ ....+.|+..+.
T Consensus 166 idL~G~E~~~~~~~~f~~~f~~ar~~g~~l~~t~HAGE~~~~~~---------~~~~~v~~al-~l-g~~RIGHG~~~~~ 234 (345)
T cd01321 166 FDLVGQEDAGRPLLDFLPQLLWFPKQCAEIPFFFHAGETNGDGT---------ETDENLVDAL-LL-NTKRIGHGFALPK 234 (345)
T ss_pred EecCCCccCCCCHHHHHHHHHHHHHhCCCCceEeecCCCcCCCC---------CChhHHHHHH-Hh-CCCcCccccccCc
Confidence 4444433 345778888899999999 999999998642100 0011112222 11 224578999875
Q ss_pred -hhhHHHHHhcCCeEEECccchhhcc-----CcccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccC
Q 014702 287 -HTEIGLLSRAGVKVSHCPASAMRML-----GFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFAN 360 (420)
Q Consensus 287 -~~~~~~~~~~~~~~~~~p~~~~~~~-----~~~~~~~~~~~gv~~~lgsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (420)
++.++.++++++.+.+||.+|.... ...|+++++++|++++++||.+...+..++..+...+....
T Consensus 235 dp~ll~~l~~~~I~lEvCPtSN~~~~~v~~~~~HPl~~ll~~Gv~vtinTDDp~~f~t~~l~~Ey~~~~~~~-------- 306 (345)
T cd01321 235 HPLLMDLVKKKNIAIEVCPISNQVLGLVSDLRNHPAAALLARGVPVVISSDDPGFWGAKGLSHDFYQAFMGL-------- 306 (345)
T ss_pred CHHHHHHHHHcCCeEEECcchhhhhccccchhhChHHHHHHCCCeEEEeCCCcchhCCCCchHHHHHHHHHh--------
Confidence 6678999999999999999997652 24699999999999999999986533225666665553211
Q ss_pred CCCCCCCCCHHHHHHHHhHHHHHHccCCC
Q 014702 361 GTTDPAALPAETVLRMATINGAKSVLWDN 389 (420)
Q Consensus 361 ~~~~~~~ls~~~al~~~T~~~A~~lgl~~ 389 (420)
.+.+++.++ +..++.|+.+...+++
T Consensus 307 ---g~~~l~~~~-l~~l~~nsi~~sF~~~ 331 (345)
T cd01321 307 ---APADAGLRG-LKQLAENSIRYSALSD 331 (345)
T ss_pred ---ccCCCCHHH-HHHHHHHHHHHHCCCH
Confidence 012388888 5666788877776643
No 123
>cd01310 TatD_DNAse TatD like proteins; E.coli TatD is a cytoplasmic protein, shown to have magnesium dependent DNase activity.
Probab=98.83 E-value=3.3e-07 Score=80.88 Aligned_cols=137 Identities=14% Similarity=0.076 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCCChhhHHHHHhcCCeEE
Q 014702 222 DRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVS 301 (420)
Q Consensus 222 ~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~ 301 (420)
.+.++.+.++|.+++++|.+|+..... ...+++...+ ....++.|+..-+.+.++.+.+.|+.+.
T Consensus 107 ~~~~~~~~~~a~e~~~pv~iH~~~~~~-------------~~~~l~~~~~--~~~~~i~H~~~~~~~~~~~~~~~g~~~~ 171 (251)
T cd01310 107 KEVFRAQLELAKELNLPVVIHSRDAHE-------------DVLEILKEYG--PPKRGVFHCFSGSAEEAKELLDLGFYIS 171 (251)
T ss_pred HHHHHHHHHHHHHhCCCeEEEeeCchH-------------HHHHHHHhcC--CCCCEEEEccCCCHHHHHHHHHcCCEEE
Confidence 356788999999999999999865311 1222333333 2445677887656677888888899888
Q ss_pred ECccchhhccCcccHHHHHHcC--CcEEEccCCCCCCCC------CCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHH
Q 014702 302 HCPASAMRMLGFAPIKEMLHAD--ICVSLGTDGAPSNNR------MSIVDEMYLASLINKGREVFANGTTDPAALPAETV 373 (420)
Q Consensus 302 ~~p~~~~~~~~~~~~~~~~~~g--v~~~lgsD~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~a 373 (420)
+.+...... ..-++.+.+.+ -++.++||++..... ..+..-......+.. ..+++.+++
T Consensus 172 ~~~~~~~~~--~~~~~~~~~~~~~dril~~TD~p~~~~~~~~~~~~~~~~~~~~~~~la~-----------~~gl~~e~~ 238 (251)
T cd01310 172 ISGIVTFKN--ANELREVVKEIPLERLLLETDSPYLAPVPFRGKRNEPAYVKHVAEKIAE-----------LKGISVEEV 238 (251)
T ss_pred eeeeeccCC--CHHHHHHHHhCChHHEEEcccCCCCCCCCCCCCCCCChhHHHHHHHHHH-----------HHCcCHHHH
Confidence 876542111 11245555554 468999998643211 011110111111110 135999999
Q ss_pred HHHHhHHHHHHcc
Q 014702 374 LRMATINGAKSVL 386 (420)
Q Consensus 374 l~~~T~~~A~~lg 386 (420)
.++++.|+++++|
T Consensus 239 ~~~~~~N~~~ll~ 251 (251)
T cd01310 239 AEVTTENAKRLFG 251 (251)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999999985
No 124
>TIGR00010 hydrolase, TatD family. Several genomes have multiple paralogs related to this family. However, a set of 17 proteins can be found, one each from 17 of the first 20 genomes, such that each member forms a bidirectional best hit across genomes with all other members of the set. This core set (and one other near-perfect member), but not the other paralogs, form the seed for this model. Additionally, members of the seed alignment and all trusted hits, but not all paralogs, have a conserved motif DxHxH near the amino end. The member from E. coli was recently shown to have DNase activity.
Probab=98.81 E-value=3.7e-07 Score=80.65 Aligned_cols=137 Identities=11% Similarity=0.069 Sum_probs=84.1
Q ss_pred HHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCCChhhHHHHHhcCCeEEE
Q 014702 223 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSH 302 (420)
Q Consensus 223 ~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~ 302 (420)
+.++..+++|.+++++|.+|+...... ..+++...+ ....++.|+..-+.+.+..+.+.|+.+.+
T Consensus 108 ~~~~~~~~~a~~~~~pv~iH~~~~~~~-------------~~~~l~~~~--~~~~~i~H~~~~~~~~~~~~~~~g~~~~~ 172 (252)
T TIGR00010 108 EVFRAQLQLAEELNLPVIIHARDAEED-------------VLDILREEK--PKVGGVLHCFTGDAELAKKLLDLGFYISI 172 (252)
T ss_pred HHHHHHHHHHHHhCCCeEEEecCccHH-------------HHHHHHhcC--CCCCEEEEccCCCHHHHHHHHHCCCeEee
Confidence 677888999999999999999643211 223343333 12355678876667778888888998887
Q ss_pred CccchhhccCcccHHHHHHcC--CcEEEccCCCCCC-----CCCCHHHHHHH-HHHHhcccccccCCCCCCCCCCHHHHH
Q 014702 303 CPASAMRMLGFAPIKEMLHAD--ICVSLGTDGAPSN-----NRMSIVDEMYL-ASLINKGREVFANGTTDPAALPAETVL 374 (420)
Q Consensus 303 ~p~~~~~~~~~~~~~~~~~~g--v~~~lgsD~~~~~-----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ls~~~al 374 (420)
....... ....++++++.. -++.++||.+... ...+....+.. ...+.. ..|++.+++.
T Consensus 173 ~~~~~~~--~~~~~~~~i~~~~~dril~~TD~p~~~~~~~~~~~~~p~~i~~~~~~~a~-----------~~g~~~~~~~ 239 (252)
T TIGR00010 173 SGIVTFK--NAKSLREVVRKIPLERLLVETDSPYLAPVPYRGKRNEPAFVRYTVEAIAE-----------IKGMDVEELA 239 (252)
T ss_pred ceeEecC--CcHHHHHHHHhCCHHHeEecccCCCCCCCCCCCCCCCChhHHHHHHHHHH-----------HhCcCHHHHH
Confidence 7643211 112245555554 4789999986421 00011111111 111111 0259999999
Q ss_pred HHHhHHHHHHccC
Q 014702 375 RMATINGAKSVLW 387 (420)
Q Consensus 375 ~~~T~~~A~~lgl 387 (420)
++++.||++++++
T Consensus 240 ~~~~~N~~~~~~~ 252 (252)
T TIGR00010 240 QITTKNAKRLFGL 252 (252)
T ss_pred HHHHHHHHHHhCc
Confidence 9999999999875
No 125
>PLN02599 dihydroorotase
Probab=98.77 E-value=1.8e-06 Score=79.29 Aligned_cols=161 Identities=14% Similarity=0.105 Sum_probs=89.7
Q ss_pred HHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCC-hHHHH--HHhccCCCccceeeccCCChhhHHHHHh--c
Q 014702 222 DRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHG-TVTFL--DKIEFLQNNLLSAHTVWVNHTEIGLLSR--A 296 (420)
Q Consensus 222 ~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~-~~~~l--~~~~~~~~~~~~~h~~~~~~~~~~~~~~--~ 296 (420)
.+.+..+++.+.+.|+++.+|+............ ... ....+ ......+.+..+.|.. +.+.++.+++ .
T Consensus 135 ~~~l~~~le~~~e~G~~L~vH~E~~~~~~~~~~~----E~~~i~r~l~~~la~~~g~kI~i~HiS--t~~~ve~v~~ak~ 208 (364)
T PLN02599 135 LGKCLPVLEEMAEQGMPLLVHGEVTDPSVDIFDR----EKVFIDTILAPLVQKLPQLKIVMEHIT--TMDAVEFVESCGD 208 (364)
T ss_pred HHHHHHHHHHHHhcCCEEEEecCCCccccccccc----HHHHHHHHHHHHHHhccCCeEEEEecC--hHHHHHHHHhccC
Confidence 4788888899999999999999874321100000 000 01122 1223344455555553 3444555543 2
Q ss_pred -CCeEEECccchhhc-------------cCcccHH---------HHHHcCCc-EEEccCCCCCCC-------CC-CHHHH
Q 014702 297 -GVKVSHCPASAMRM-------------LGFAPIK---------EMLHADIC-VSLGTDGAPSNN-------RM-SIVDE 344 (420)
Q Consensus 297 -~~~~~~~p~~~~~~-------------~~~~~~~---------~~~~~gv~-~~lgsD~~~~~~-------~~-~~~~~ 344 (420)
.+.+.+||.+.... ...+|++ +.+.+|.. ..++|||.|+.. +. ..+..
T Consensus 209 ~~vtae~tpHhL~l~~~~~~~~~~~~~~k~~PPlR~~~dr~aL~~al~~G~i~~~i~SDHaPh~~~~K~~~~g~~Gi~~~ 288 (364)
T PLN02599 209 GNVAATVTPQHLLLNRNALFQGGLQPHNYCLPVLKREIHREALVKAATSGSKKFFLGTDSAPHPKRAKEASCGCAGIYSA 288 (364)
T ss_pred CCEEEEecHHHHhcCHHHHhccCCCCCeEEECCCCCHHHHHHHHHHHHcCCCCEEEecCCCCCChHHhcCCCCCCCcccH
Confidence 57788998754211 1123443 45677885 899999998631 10 11110
Q ss_pred -HHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCCcccccccCc
Q 014702 345 -MYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGK 398 (420)
Q Consensus 345 -~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~~G~ 398 (420)
.....+... ....+ +++++++.+|.|||+++|+..++|+|.-=|
T Consensus 289 ~~~l~~l~~~---------~~~~g-~l~~l~~~~S~npA~~~gL~~~kg~i~l~~ 333 (364)
T PLN02599 289 PVALSLYAKA---------FEEAG-ALDKLEAFTSFNGPDFYGLPRNTSTITLVK 333 (364)
T ss_pred HHHHHHHHHH---------HHhcC-CHHHHHHHHhHHHHHHhCCCCCCCeEEEEE
Confidence 000011100 01123 889999999999999999965678765433
No 126
>PRK09875 putative hydrolase; Provisional
Probab=98.73 E-value=6.6e-06 Score=72.98 Aligned_cols=239 Identities=13% Similarity=0.048 Sum_probs=138.5
Q ss_pred HHHHHHHHHHHHhCCcceeeeCC----ccCHHHHHHHHHHhCCeeEeeehhccCCCCCCcccccCChhHHHHHHHHHHHH
Q 014702 124 YISTLLCGIELIHSGVTCFAEAG----GQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAK 199 (420)
Q Consensus 124 ~~~~~~~~~~~~~~Gvtt~~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (420)
...+...++.+.+.|..|+++.. +.......+.+++.|+++..+..++... ..|......+..+..+.....+.+
T Consensus 33 ~~~~~~el~~~~~~Gg~tiVd~T~~g~GRd~~~l~~is~~tgv~Iv~~TG~y~~~-~~p~~~~~~~~e~la~~~i~ei~~ 111 (292)
T PRK09875 33 YAFICQEMNDLMTRGVRNVIEMTNRYMGRNAQFMLDVMRETGINVVACTGYYQDA-FFPEHVATRSVQELAQEMVDEIEQ 111 (292)
T ss_pred HHHHHHHHHHHHHhCCCeEEecCCCccCcCHHHHHHHHHHhCCcEEEcCcCCCCc-cCCHHHhcCCHHHHHHHHHHHHHH
Confidence 34444455677789999999864 4667788899999999998877666443 244443333333333333333333
Q ss_pred hcCC---CCCceEEEEeecc--ccccCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCChHHHHHHhccCC
Q 014702 200 HHHA---ADGRIRIWFGIRQ--IMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQ 274 (420)
Q Consensus 200 ~~~~---~~~~i~~~~~~~~--~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 274 (420)
.... ..+.++- ++... .-..-.+.++.+.+.+++.|++|.+|........ ..++++...+.--
T Consensus 112 Gi~gt~ikaGvIGe-iG~~~~~it~~E~kvl~Aaa~a~~~TG~pi~~Ht~~~~~g~-----------e~l~il~e~Gvd~ 179 (292)
T PRK09875 112 GIDGTELKAGIIAE-IGSSEGKITPLEEKVFIAAALAHNQTGRPISTHTSFSTMGL-----------EQLALLQAHGVDL 179 (292)
T ss_pred hhccCCCcccEEEE-EecCCCCCCHHHHHHHHHHHHHHHHHCCcEEEcCCCccchH-----------HHHHHHHHcCcCc
Confidence 2211 1233311 11111 1122234567777778899999999975432211 1234456666656
Q ss_pred CccceeeccCC-ChhhHHHHHhcCCeEEECccchhh----ccCcccHHHHHHcC--CcEEEccCCCCCCC-----CCCHH
Q 014702 275 NNLLSAHTVWV-NHTEIGLLSRAGVKVSHCPASAMR----MLGFAPIKEMLHAD--ICVSLGTDGAPSNN-----RMSIV 342 (420)
Q Consensus 275 ~~~~~~h~~~~-~~~~~~~~~~~~~~~~~~p~~~~~----~~~~~~~~~~~~~g--v~~~lgsD~~~~~~-----~~~~~ 342 (420)
.++++.|.... +.+.+..+.+.|+.+.++-..... ......+..+.+.| -.+.+++|...... +..+.
T Consensus 180 ~rvvi~H~d~~~d~~~~~~l~~~G~~l~fD~~g~~~~~pd~~r~~~i~~L~~~Gy~drilLS~D~~~~~~~~~~gg~G~~ 259 (292)
T PRK09875 180 SRVTVGHCDLKDNLDNILKMIDLGAYVQFDTIGKNSYYPDEKRIAMLHALRDRGLLNRVMLSMDITRRSHLKANGGYGYD 259 (292)
T ss_pred ceEEEeCCCCCCCHHHHHHHHHcCCEEEeccCCCcccCCHHHHHHHHHHHHhcCCCCeEEEeCCCCCcccccccCCCChh
Confidence 67889998753 446678888999998875211100 01123456677887 56888999753211 11111
Q ss_pred HHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcc
Q 014702 343 DEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVL 386 (420)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lg 386 (420)
..+......- ...|+|.+++=+++..||+++|+
T Consensus 260 ~i~~~~ip~L-----------~~~Gvse~~I~~m~~~NP~r~~~ 292 (292)
T PRK09875 260 YLLTTFIPQL-----------RQSGFSQADVDVMLRENPSQFFQ 292 (292)
T ss_pred HHHHHHHHHH-----------HHcCCCHHHHHHHHHHCHHHHhC
Confidence 2222221111 12469999999999999999874
No 127
>PF00962 A_deaminase: Adenosine/AMP deaminase immunodeficiency disease (SCID); InterPro: IPR001365 Adenosine deaminase (3.5.4.4 from EC) catalyzes the hydrolytic deamination of adenosine into inosine and AMP deaminase (3.5.4.6 from EC) catalyzes the hydrolytic deamination of AMP into IMP. It has been shown [] that these two enzymes share three regions of sequence similarities; these regions are centred on residues which are proposed to play an important role in the catalytic mechanism of these two enzymes.; GO: 0019239 deaminase activity, 0009168 purine ribonucleoside monophosphate biosynthetic process; PDB: 3LGG_B 3LGD_B 2AMX_B 3EWD_A 2QVN_A 2PGF_A 2PGR_A 3EWC_A 1W1I_G 1O5R_A ....
Probab=98.71 E-value=1.2e-06 Score=80.73 Aligned_cols=167 Identities=20% Similarity=0.226 Sum_probs=100.3
Q ss_pred HHHHHHHHHHHHhcCCCCCceEEEEeeccccccCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCChHHHH
Q 014702 188 DCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFL 267 (420)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l 267 (420)
....+..++..++... ..+++-+..... ...+..+..+.+.+++.|+++.+|+.|...... ..
T Consensus 148 ~~~~~~~~~~~~~~~~--~vvG~dl~g~E~-~~~~~~~~~~~~~a~~~gl~~t~HaGE~~~~~~--------------~~ 210 (331)
T PF00962_consen 148 EWAEEIVELASKYPDK--GVVGFDLAGDED-GGPPLKFAPAFRKAREAGLKLTVHAGETGGPEH--------------IR 210 (331)
T ss_dssp HHHHHHHHHHHHTTTT--TEEEEEEESSTT-STTGGGHHHHHHHHHHTT-EEEEEESSSSTHHH--------------HH
T ss_pred HHHHHHHHHHhhcccc--eEEEEEecCCcc-cCchHHHHHHHhhhcccceeecceecccCCccc--------------cc
Confidence 3344455555555432 455543333222 223334777888899999999999998664321 12
Q ss_pred HHhccCCCccceeeccCCC--hhhHHHHHhcCCeEEECccchhhccC-----cccHHHHHHcCCcEEEccCCCCCCCCCC
Q 014702 268 DKIEFLQNNLLSAHTVWVN--HTEIGLLSRAGVKVSHCPASAMRMLG-----FAPIKEMLHADICVSLGTDGAPSNNRMS 340 (420)
Q Consensus 268 ~~~~~~~~~~~~~h~~~~~--~~~~~~~~~~~~~~~~~p~~~~~~~~-----~~~~~~~~~~gv~~~lgsD~~~~~~~~~ 340 (420)
+++..++. ..+.|+..+. ++.++++++.++.+.+||.+|..... ..|++++++.|++++++||.+... +.+
T Consensus 211 ~ai~~l~~-~RIgHG~~~~~~p~l~~~~~~~~I~iEvcptSN~~~~~~~~~~~hP~~~~~~~gv~v~i~TDd~~~~-~~~ 288 (331)
T PF00962_consen 211 DAILLLGA-DRIGHGVRLIKDPELLELLAERQIPIEVCPTSNVQLGAVPSYEEHPLRKLLDAGVPVSINTDDPGVF-GTT 288 (331)
T ss_dssp HHHHTST--SEEEE-GGGGGSHHHHHHHHHTT-EEEE-HHHHHHTTSSSTGGG-CHHHHHHTT-EEEE--BSHHHH-T-S
T ss_pred chhhhccc-eeecchhhhhhhhHHHHHHHHhCCCeeeCCCcCcccceeeecchhHHHHHHHcCCceeccCCCcccc-CCC
Confidence 22222222 3588999875 45578999999999999999876522 469999999999999999987532 124
Q ss_pred HHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCC
Q 014702 341 IVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 388 (420)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~ 388 (420)
+..+...+.... ++|.++ ++.+..|+.+..+++
T Consensus 289 l~~ey~~~~~~~--------------~l~~~~-l~~l~~nsi~~sf~~ 321 (331)
T PF00962_consen 289 LSDEYYLAAEAF--------------GLSLAD-LKQLARNSIEASFLS 321 (331)
T ss_dssp HHHHHHHHHHHH--------------T--HHH-HHHHHHHHHHCSSS-
T ss_pred cHHHHHHHHHHc--------------CCCHHH-HHHHHHHHHHHHcCC
Confidence 667766654332 388888 566667887777664
No 128
>COG1816 Add Adenosine deaminase [Nucleotide transport and metabolism]
Probab=98.69 E-value=3.7e-06 Score=75.49 Aligned_cols=139 Identities=19% Similarity=0.236 Sum_probs=97.9
Q ss_pred ccCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCCC--hhhHHHHHhc
Q 014702 219 NATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN--HTEIGLLSRA 296 (420)
Q Consensus 219 ~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~--~~~~~~~~~~ 296 (420)
...++....+.++++++|+.+.+|+.+........ +++...+. ..+.||..+- ++.+.++.+.
T Consensus 181 ~~p~~~f~~~f~~~r~~gl~lt~HaGE~~~~~~i~-----------~al~~~~~----~rI~HGi~~~~d~~L~~~l~~~ 245 (345)
T COG1816 181 GYPPELFVSLFKLARDNGLKLTIHAGEAGGPESIR-----------DALDLLGA----ERIGHGIRAIEDPELLYRLAER 245 (345)
T ss_pred cCCHHHHHHHHHHHHHcCceEEEeccccCCcHHHH-----------HHHHHhch----hhhccccccccCHHHHHHHHHh
Confidence 45677889999999999999999999754322111 11222221 1467988754 4457889999
Q ss_pred CCeEEECccchhhcc-----CcccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHH
Q 014702 297 GVKVSHCPASAMRML-----GFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAE 371 (420)
Q Consensus 297 ~~~~~~~p~~~~~~~-----~~~~~~~~~~~gv~~~lgsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~ 371 (420)
++.+.+||.+|.... ...|++++.+.|++++++||.+...+. ++..+...+.... +++.+
T Consensus 246 qI~levCP~SNi~~~~v~~~~~hPf~~~~d~Gv~VsLnTDdp~~f~~-~l~~Ey~~aa~~~--------------~l~~~ 310 (345)
T COG1816 246 QIPLEVCPLSNIQLGVVPSLAKHPFKKLFDAGVKVSLNTDDPLYFGT-PLIEEYLVAAQIY--------------GLSRE 310 (345)
T ss_pred CCeeEECCcchhhcccccchhhCcHHHHHHcCCceEEcCCChhhcCC-chHHHHHHHHHHh--------------CCCHH
Confidence 999999999995442 246999999999999999999876432 5666666664432 38888
Q ss_pred HHHHHHhHHHHHHccCC
Q 014702 372 TVLRMATINGAKSVLWD 388 (420)
Q Consensus 372 ~al~~~T~~~A~~lgl~ 388 (420)
++ ..++.|+=+..+++
T Consensus 311 dl-~~~arnav~~af~~ 326 (345)
T COG1816 311 DL-CELARNAVEAAFIS 326 (345)
T ss_pred HH-HHHHHHHHHHccCC
Confidence 84 45566666666654
No 129
>PRK11449 putative deoxyribonuclease YjjV; Provisional
Probab=98.39 E-value=7.6e-05 Score=65.54 Aligned_cols=137 Identities=11% Similarity=0.060 Sum_probs=83.8
Q ss_pred HHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCCChhhHHHHHhcCCeEEE
Q 014702 223 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSH 302 (420)
Q Consensus 223 ~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~ 302 (420)
+.+++.+++|.+++++|.+|+-....+ ..+++...+. ....+.|+..-+.+..+.+.+.|..+.+
T Consensus 114 ~vf~~ql~lA~~~~~Pv~iH~r~a~~~-------------~~~il~~~~~--~~~~i~H~fsG~~~~a~~~l~~G~~iS~ 178 (258)
T PRK11449 114 WLLDEQLKLAKRYDLPVILHSRRTHDK-------------LAMHLKRHDL--PRTGVVHGFSGSLQQAERFVQLGYKIGV 178 (258)
T ss_pred HHHHHHHHHHHHhCCCEEEEecCccHH-------------HHHHHHhcCC--CCCeEEEcCCCCHHHHHHHHHCCCEEEe
Confidence 467888999999999999999653221 2333433321 1235789998889999999999988877
Q ss_pred CccchhhccCcccHHHHHHc-C-CcEEEccCCCCCCCC------CCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHH
Q 014702 303 CPASAMRMLGFAPIKEMLHA-D-ICVSLGTDGAPSNNR------MSIVDEMYLASLINKGREVFANGTTDPAALPAETVL 374 (420)
Q Consensus 303 ~p~~~~~~~~~~~~~~~~~~-g-v~~~lgsD~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al 374 (420)
.+..... ....++++++. . -.+.+.||+|..+.. ..+.........+... .+++.+++.
T Consensus 179 ~g~it~~--~~~~~~~~~~~ipldriL~ETD~P~l~p~~~~~~~n~p~~~~~~~~~ia~l-----------~~~~~~el~ 245 (258)
T PRK11449 179 GGTITYP--RASKTRDVIAKLPLASLLLETDAPDMPLNGFQGQPNRPEQAARVFDVLCEL-----------RPEPADEIA 245 (258)
T ss_pred Ccccccc--CcHHHHHHHHhCChhhEEEecCCCCCCCCCCCCCCCCChHHHHHHHHHHHH-----------HCcCHHHHH
Confidence 6543211 11123444432 1 347899999742210 0111111111111111 248899999
Q ss_pred HHHhHHHHHHccC
Q 014702 375 RMATINGAKSVLW 387 (420)
Q Consensus 375 ~~~T~~~A~~lgl 387 (420)
+..+.|..+++|+
T Consensus 246 ~~~~~N~~~lf~~ 258 (258)
T PRK11449 246 EVLLNNTYTLFNV 258 (258)
T ss_pred HHHHHHHHHHhCc
Confidence 9999999998874
No 130
>PRK10812 putative DNAse; Provisional
Probab=98.36 E-value=4.3e-05 Score=67.32 Aligned_cols=139 Identities=13% Similarity=0.057 Sum_probs=86.7
Q ss_pred HHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCCChhhHHHHHhcCCeEEE
Q 014702 223 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSH 302 (420)
Q Consensus 223 ~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~ 302 (420)
+.++..+++|.+++++|.+|+-....+ ..+++....... ...+.|+..-+.+.++.+.+.|..+.+
T Consensus 111 ~vf~~ql~lA~e~~~Pv~iH~r~a~~~-------------~l~iL~~~~~~~-~~~v~H~fsG~~~~a~~~~~~G~~is~ 176 (265)
T PRK10812 111 ESFRHHIQIGRELNKPVIVHTRDARAD-------------TLAILREEKVTD-CGGVLHCFTEDRETAGKLLDLGFYISF 176 (265)
T ss_pred HHHHHHHHHHHHhCCCeEEEeeCchHH-------------HHHHHHhhcCCC-CCEEEEeecCCHHHHHHHHHCCCEEEE
Confidence 457888999999999999998653221 233343332211 124589998778889999999988877
Q ss_pred CccchhhccCcccHHHHHHcC--CcEEEccCCCCCCC------CCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHH
Q 014702 303 CPASAMRMLGFAPIKEMLHAD--ICVSLGTDGAPSNN------RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVL 374 (420)
Q Consensus 303 ~p~~~~~~~~~~~~~~~~~~g--v~~~lgsD~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al 374 (420)
...... .....++++.+.+ -.+.+.||.|-..+ ...+..-...+..+.+. .+++.+++.
T Consensus 177 ~g~~t~--~~~~~~~~~~~~ipldrlLlETD~P~~~p~~~~g~~n~P~~i~~v~~~ia~l-----------~g~~~eei~ 243 (265)
T PRK10812 177 SGIVTF--RNAEQLRDAARYVPLDRLLVETDSPYLAPVPHRGKENQPAMVRDVAEYMAVL-----------KGVSVEELA 243 (265)
T ss_pred Ceeeec--CccHHHHHHHHhCChhhEEEecCCCCCCCcCCCCCCCCcHHHHHHHHHHHHH-----------hCCCHHHHH
Confidence 643221 1112356666655 46889999863210 01121112211122111 259999999
Q ss_pred HHHhHHHHHHccCC
Q 014702 375 RMATINGAKSVLWD 388 (420)
Q Consensus 375 ~~~T~~~A~~lgl~ 388 (420)
+.++.|+.++++++
T Consensus 244 ~~~~~N~~~lf~~~ 257 (265)
T PRK10812 244 QVTTDNFARLFHID 257 (265)
T ss_pred HHHHHHHHHHHCCC
Confidence 99999999999984
No 131
>TIGR01431 adm_rel adenosine deaminase-related growth factor. Members of this family have been described as secreted proteins with growth factor activity and regions of adenosine deaminase homology in insects, mollusks, and vertebrates.
Probab=98.30 E-value=7.3e-05 Score=71.21 Aligned_cols=148 Identities=13% Similarity=0.139 Sum_probs=97.3
Q ss_pred ccCHHHHHHHHH-HHHHcCCccceeccCCcchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCCC--hhhHHHHHh
Q 014702 219 NATDRLLLETRD-MAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN--HTEIGLLSR 295 (420)
Q Consensus 219 ~~~~~~l~~~~~-~a~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~--~~~~~~~~~ 295 (420)
..+...+...+. .+++.++++.+|+.|...... .....+.+++ .++ ...+.|+..+. |+.++.+++
T Consensus 302 g~pl~~f~~~~~~~~~~~gl~~t~HAGE~~~~g~---------~~d~nl~dAI-lLg-~~RIGHG~~l~~~P~l~~~vke 370 (479)
T TIGR01431 302 GRSLLDFIDALLGPSDKEKLPYFFHAGETNWQGT---------TVDENLIDAL-LLN-TTRIGHGFALVKHPLVLQMLKE 370 (479)
T ss_pred CCCHHHHHHHHHHHHHhCCCCEEEecCCcCCCCC---------CchhHHHHHH-HcC-CccccCcccccCCHHHHHHHHH
Confidence 334555555554 555689999999998753210 0112233333 222 24578999876 677899999
Q ss_pred cCCeEEECccchhhc-----cCcccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCH
Q 014702 296 AGVKVSHCPASAMRM-----LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPA 370 (420)
Q Consensus 296 ~~~~~~~~p~~~~~~-----~~~~~~~~~~~~gv~~~lgsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~ 370 (420)
+++.+.+||.+|... ....|++.++++|++++|+||.+.......+..+...+..... ...+++
T Consensus 371 ~~I~lEvCP~SN~~l~~v~~~~~HPl~~lla~Gvpv~InSDDP~~~~~t~Ls~ef~~a~~~~~-----------~~~~~l 439 (479)
T TIGR01431 371 RNIAVEVNPISNQVLQLVADLRNHPCAYLFADNYPMVISSDDPAFWGATPLSHDFYIAFMGLA-----------SAKADL 439 (479)
T ss_pred hCCeEEECccchhhhcccCCcccChHHHHHHCCCcEEEeCCCccccCCCCchHHHHHHHHHhc-----------ccCCCH
Confidence 999999999999755 2247999999999999999999865332245555555532211 011455
Q ss_pred HHHHHHHhHHHHHHccCCC
Q 014702 371 ETVLRMATINGAKSVLWDN 389 (420)
Q Consensus 371 ~~al~~~T~~~A~~lgl~~ 389 (420)
+-++.+..|..+...+++
T Consensus 440 -~~L~~la~NSi~~Sfl~~ 457 (479)
T TIGR01431 440 -RTLKQLALNSIKYSALSE 457 (479)
T ss_pred -HHHHHHHHHHHHHHCCCH
Confidence 447777888888777654
No 132
>PF02126 PTE: Phosphotriesterase family; InterPro: IPR001559 Synonym(s): Paraoxonase, A-esterase, Aryltriphosphatase, Phosphotriesterase, Paraoxon hydrolase Bacteria such as Brevundimonas diminuta (Pseudomonas diminuta) harbour a plasmid that carries the gene for Aryldialkylphosphatase (3.1.8.1 from EC) (PTE) (also known as parathion hydrolase). This enzyme has attracted interest because of its potential use in the detoxification of chemical waste and warfare agents and its ability to degrade agricultural pesticides such as parathion. It acts specifically on synthetic organophosphate triesters and phosphorofluoridates. It does not seem to have a natural occuring substrate and may thus have optimally evolved for utilizing paraoxon. Aryldialkylphosphatase belongs to a family [, ] of enzymes that possess a binuclear zinc metal centre at their active site. The two zinc ions are coordinated by six different residues, six of which being histidines. This family so far includes, in addition to the parathion hydrolase, the following proteins: Escherichia coli protein Php, the substrate of which is not yet known. Mycobacterium tuberculosis phosphotriesterase homology protein Rv0230C. Mammalian phosphotriesterase related protein (PTER) (RPR-1). ; GO: 0008270 zinc ion binding, 0016788 hydrolase activity, acting on ester bonds, 0009056 catabolic process; PDB: 3MSR_A 3OVG_D 3K2G_C 1BF6_B 3OQE_A 3C86_A 3SO7_A 2D2G_A 2R1P_A 2D2H_A ....
Probab=98.28 E-value=3.1e-05 Score=69.37 Aligned_cols=235 Identities=11% Similarity=0.063 Sum_probs=129.9
Q ss_pred HHHHHHHHHHHHHhCCcceeeeCC----ccCHHHHHHHHHHhCCeeEeeehhccCCCCCCcccccCChhHHHHHHHHHHH
Q 014702 123 SYISTLLCGIELIHSGVTCFAEAG----GQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYA 198 (420)
Q Consensus 123 ~~~~~~~~~~~~~~~Gvtt~~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (420)
....+...++.+...|..|++++. +.....+.+.++..|+++..+..++... ..|......+..+.. ..+++
T Consensus 36 ~~~~~~~El~~~k~~Gg~tiVd~T~~g~GRd~~~l~~is~~tGv~II~~TG~y~~~-~~p~~~~~~s~e~la---~~~i~ 111 (308)
T PF02126_consen 36 DVEAAVAELKEFKAAGGRTIVDATPIGLGRDVEALREISRRTGVNIIASTGFYKEP-FYPEWVREASVEELA---DLFIR 111 (308)
T ss_dssp HHHHHHHHHHHHHHTTEEEEEE--SGGGTB-HHHHHHHHHHHT-EEEEEEEE-SGG-CSCHHHHTSHHHHHH---HHHHH
T ss_pred hHHHHHHHHHHHHHcCCCEEEecCCcccCcCHHHHHHHHHHhCCeEEEeCCCCccc-cCChhhhcCCHHHHH---HHHHH
Confidence 344555566778889999999865 4667888899999999998876665432 233322222222222 22233
Q ss_pred HhcC------CCCCceEEEEeeccccccCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCChHHHHHHhcc
Q 014702 199 KHHH------AADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEF 272 (420)
Q Consensus 199 ~~~~------~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 272 (420)
++.. ...+.|+........-......++.+....++.|++|++|......... ..++++...+.
T Consensus 112 Ei~~GidgT~ikaG~Ik~~~~~~~it~~E~k~lrAaa~A~~~TG~pI~~H~~~g~~~~~----------e~~~il~e~Gv 181 (308)
T PF02126_consen 112 EIEEGIDGTGIKAGIIKEIGSSNPITPLEEKVLRAAARAHKETGAPISTHTGRGTRMGL----------EQLDILEEEGV 181 (308)
T ss_dssp HHHT-STTSSB-ESEEEEEEBTTBCEHHHHHHHHHHHHHHHHHT-EEEEEESTTGTCHH----------HHHHHHHHTT-
T ss_pred HHHhcCCCCccchhheeEeeccCCCCHHHHHHHHHHHHHHHHhCCeEEEcCCCCCcCHH----------HHHHHHHHcCC
Confidence 3322 1234555543332222223345666777778999999999977642111 13445666676
Q ss_pred CCCccceeeccCCCh-hhHHHHHhcCCeEEECcc-----chhh-----c----cCcccHHHHHHcCC--cEEEccCCCC-
Q 014702 273 LQNNLLSAHTVWVNH-TEIGLLSRAGVKVSHCPA-----SAMR-----M----LGFAPIKEMLHADI--CVSLGTDGAP- 334 (420)
Q Consensus 273 ~~~~~~~~h~~~~~~-~~~~~~~~~~~~~~~~p~-----~~~~-----~----~~~~~~~~~~~~gv--~~~lgsD~~~- 334 (420)
--.++++.|.....+ +.+..+.+.|+.+.+.-. .... . .....+..|.+.|. .+.+|.|..-
T Consensus 182 ~~~rvvigH~D~~~D~~y~~~la~~G~~l~~D~~g~~~~g~~~~~~~~~~~d~~ri~~l~~L~~~Gy~~qIlLS~D~~~k 261 (308)
T PF02126_consen 182 DPSRVVIGHMDRNPDLDYHRELADRGVYLEFDTIGREFSGKDKNPRVGYPPDEERIELLKELIEEGYADQILLSHDIGRK 261 (308)
T ss_dssp -GGGEEETSGGGST-HHHHHHHHHTT-EEEETTTT-B-TTTTTCHSCTTS-HHHHHHHHHHHHHTTTGGGEEE-HHHESE
T ss_pred ChhHeEEeCCCCCCCHHHHHHHHhcCCEEEecCCcccccCcccCccCCCCCHHHHHHHHHHHHHcCCcCcEEEecccccc
Confidence 667788999884333 346778889998876433 1000 0 11234667888884 5889988543
Q ss_pred -----CC---CCCCHH-HHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHc
Q 014702 335 -----SN---NRMSIV-DEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSV 385 (420)
Q Consensus 335 -----~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~l 385 (420)
.+ .+..++ ..+... +. +.|+|.+++=+++..||+|+|
T Consensus 262 ~~~~~~gg~g~~~~~i~~~fiP~-L~-------------~~Gv~~~~i~~ilv~NP~r~l 307 (308)
T PF02126_consen 262 SRLYRYGGGGYGYIYILTRFIPR-LK-------------ERGVSEEDIDKILVENPARIL 307 (308)
T ss_dssp EGSSSCCHHHHTTTHHHHTHHHH-HH-------------HTTS-HHHHHHHHTHHHHHHH
T ss_pred ccccccCCCCccHHHHHHHHHHH-HH-------------HcCCCHHHHHHHHHHCHHHHc
Confidence 10 011111 111111 11 246999999999999999986
No 133
>KOG1097 consensus Adenine deaminase/adenosine deaminase [Nucleotide transport and metabolism]
Probab=98.24 E-value=0.00018 Score=65.06 Aligned_cols=142 Identities=23% Similarity=0.272 Sum_probs=94.4
Q ss_pred cCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCCChhh--HHHHHhcC
Q 014702 220 ATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTE--IGLLSRAG 297 (420)
Q Consensus 220 ~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~--~~~~~~~~ 297 (420)
.....+......+.+.|+...+|+.+........ .++++ .+ ....+.|+..+.++. +.++++.+
T Consensus 224 ~p~~~f~~vl~~~~~~gi~~t~HaGE~~~~~~~v----------~~~LD---~l-~~~RIGHG~~l~~dp~L~~~~k~~n 289 (399)
T KOG1097|consen 224 GPLSLFLEVLAKAPAKGIHLTFHAGETNGGASVV----------KNALD---LL-GTERIGHGYFLTKDPELINLLKSRN 289 (399)
T ss_pred CChhhhHHHHHhhhhcCCcEEEEccccCCChHHH----------HHHHH---hh-CCccccCceeccCCHHHHHHHHhcC
Confidence 3455666777777779999999999975221111 12233 11 224578999988766 89999999
Q ss_pred CeEEECccchhhc-----cCcccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHH
Q 014702 298 VKVSHCPASAMRM-----LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAET 372 (420)
Q Consensus 298 ~~~~~~p~~~~~~-----~~~~~~~~~~~~gv~~~lgsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~ 372 (420)
+.+.+||.+|.-. ....|++++.+.|+++.|+||.+..-....+......+..-. ..++++++
T Consensus 290 I~lEiCP~SN~vl~~v~d~rnhp~~~~~~~~vP~vI~sDDP~~f~~~~Lt~dfy~A~~~~------------~~~~~~~~ 357 (399)
T KOG1097|consen 290 IALEICPISNQVLGLVSDLRNHPVARLLAAGVPVVINSDDPGFFGAAPLTLDFYLAFLGI------------APNLDLRE 357 (399)
T ss_pred ceEEEccchhhheeccccccccHHHHHHhCCCCEEEeCCCcccccCccccHHHHHHHHhc------------cccCCHHH
Confidence 9999999998654 235799999999999999999986533322223333332211 01377777
Q ss_pred HHHHHhHHHHHHccCC
Q 014702 373 VLRMATINGAKSVLWD 388 (420)
Q Consensus 373 al~~~T~~~A~~lgl~ 388 (420)
+..++.|+.+...+.
T Consensus 358 -l~~la~nai~~S~l~ 372 (399)
T KOG1097|consen 358 -LKRLALNAIKYSFLS 372 (399)
T ss_pred -HHHHHHHHhhhccCC
Confidence 555667777766654
No 134
>PRK10425 DNase TatD; Provisional
Probab=98.22 E-value=0.00014 Score=63.71 Aligned_cols=139 Identities=13% Similarity=-0.020 Sum_probs=82.9
Q ss_pred HHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCCChhhHHHHHhcCCeEEE
Q 014702 223 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSH 302 (420)
Q Consensus 223 ~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~ 302 (420)
+.++..+++|.++++|+.+|+-....+ ..+++.... ......+.|+..=+.+.++.+.+.|..+.+
T Consensus 108 ~vF~~ql~lA~~~~~Pv~iH~r~a~~~-------------~l~iL~~~~-~~~~~~i~H~fsG~~~~~~~~l~~G~~~si 173 (258)
T PRK10425 108 RAFVAQLAIAAELNMPVFMHCRDAHER-------------FMALLEPWL-DKLPGAVLHCFTGTREEMQACLARGLYIGI 173 (258)
T ss_pred HHHHHHHHHHHHhCCCeEEEEeCchHH-------------HHHHHHHhc-cCCCCeEEEecCCCHHHHHHHHHCCCEEEE
Confidence 457888999999999999999743211 233333321 111135679998889999999999988887
Q ss_pred CccchhhccCcccHHHHHHc-C-CcEEEccCCCCCCC----------CCCHHHHHHHHHHHhcccccccCCCCCCCCCCH
Q 014702 303 CPASAMRMLGFAPIKEMLHA-D-ICVSLGTDGAPSNN----------RMSIVDEMYLASLINKGREVFANGTTDPAALPA 370 (420)
Q Consensus 303 ~p~~~~~~~~~~~~~~~~~~-g-v~~~lgsD~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~ 370 (420)
.+..... .....++++.+. . -.+.+-||.|-..+ ...+..-...+..+.+. .+++.
T Consensus 174 ~g~i~~~-~~~~~~~~~~~~ipldrlLlETDaP~l~P~~~~~~~~~~~n~P~~i~~v~~~iA~l-----------~~~~~ 241 (258)
T PRK10425 174 TGWVCDE-RRGLELRELLPLIPAERLLLETDAPYLLPRDLTPKPASRRNEPAFLPHILQRIAHW-----------RGEDA 241 (258)
T ss_pred Cceeecc-cccHHHHHHHHhCChHHEEEeccCCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHH-----------HCcCH
Confidence 6633211 001123333332 1 24778899863210 11222222222222221 25999
Q ss_pred HHHHHHHhHHHHHHccC
Q 014702 371 ETVLRMATINGAKSVLW 387 (420)
Q Consensus 371 ~~al~~~T~~~A~~lgl 387 (420)
+++.+..+.|.-+++|+
T Consensus 242 ~~v~~~~~~N~~~lf~~ 258 (258)
T PRK10425 242 AWLAATTDANARTLFGL 258 (258)
T ss_pred HHHHHHHHHHHHHHhCc
Confidence 99999999999888864
No 135
>COG1735 Php Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only]
Probab=98.17 E-value=0.00078 Score=58.49 Aligned_cols=247 Identities=15% Similarity=0.083 Sum_probs=133.9
Q ss_pred HHHHHHHHHHHHHHhCCcceeeeCC----ccCHHHHHHHHHHhCCeeEeeehhccCCCCCCcccccCChhHHHHHHHHHH
Q 014702 122 DSYISTLLCGIELIHSGVTCFAEAG----GQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELY 197 (420)
Q Consensus 122 ~~~~~~~~~~~~~~~~Gvtt~~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (420)
+....+......+.+.|+-|++|+. +.....+.+.+++.|+++..+..++....+ |........+..-+....-+
T Consensus 45 ~~~a~~~~e~~~~~a~Gg~TIVD~T~~~~GRdv~~m~~vs~atglnIV~~TGfy~~~~~-p~~~~~~~i~~~ae~~v~ei 123 (316)
T COG1735 45 DEVALAIAELKRLMARGGQTIVDATNIGIGRDVLKMRRVAEATGLNIVAATGFYKAAFH-PEYFALRPIEELAEFVVKEI 123 (316)
T ss_pred HHHHHHHHHHHHHHHcCCCeEeeCCccccCcCHHHHHHHHHHhCCcEEEeccccccccc-hhHHhhCCHHHHHHHHHHHH
Confidence 3344455566778889999999864 466778899999999999877666555432 32222212222222222222
Q ss_pred HHhcC---CCCCceEEEEeeccccccCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCChHHHHHHhccCC
Q 014702 198 AKHHH---AADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQ 274 (420)
Q Consensus 198 ~~~~~---~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 274 (420)
.+-.. ...|.|+...+...+-..-.+.++.+.+..++.+.|+++|...+... ....+++.+.+.--
T Consensus 124 ~~Gi~gT~ikAGiIk~~~~~~~iTp~Eek~lrAaA~A~~~Tg~Pi~tHt~~gt~g-----------~eq~~il~~egvdl 192 (316)
T COG1735 124 EEGIAGTGIKAGIIKEAGGSPAITPLEEKSLRAAARAHKETGAPISTHTPAGTMG-----------LEQLRILAEEGVDL 192 (316)
T ss_pred HhcccCCccccceeeeccCcccCCHHHHHHHHHHHHHhhhcCCCeEEeccchhhh-----------HHHHHHHHHcCCCh
Confidence 22111 12345554333333222233445666666688899999999775422 22344566666544
Q ss_pred CccceeeccC-CChhh-HHHHHhcCCeEEECccchhh----ccCcccHHHHHHcCC--cEEEccCCCCCCCCCCHHHHHH
Q 014702 275 NNLLSAHTVW-VNHTE-IGLLSRAGVKVSHCPASAMR----MLGFAPIKEMLHADI--CVSLGTDGAPSNNRMSIVDEMY 346 (420)
Q Consensus 275 ~~~~~~h~~~-~~~~~-~~~~~~~~~~~~~~p~~~~~----~~~~~~~~~~~~~gv--~~~lgsD~~~~~~~~~~~~~~~ 346 (420)
.++++.|+.. ..+.. .+.++.+|+.+.+.-..... .....++.++.+.|+ .+.+|-|.+... .+.+ ..
T Consensus 193 ~~v~igH~d~n~dd~~y~~~l~~~Ga~l~fD~iG~d~y~pd~~r~~~~~~l~~~gy~d~i~ls~d~~~~~--~~~~--~~ 268 (316)
T COG1735 193 RKVSIGHMDPNTDDVYYQKKLADRGAFLEFDRIGKDKYYPDEDRIAPLLELVARGYADLILLSHDDICLS--DDVF--LK 268 (316)
T ss_pred hHeeEeccCCCCChHHHHHHHHhcCceEEecccCccccCcHHHhhhhHHHHHHhhHhhheecccchhhhh--hhHH--HH
Confidence 5678899983 33444 35577778876654322110 122467788888885 355652332210 0111 11
Q ss_pred HHHHHhcccccccCCC--------CCCCCCCHHHHHHHHhHHHHHHccC
Q 014702 347 LASLINKGREVFANGT--------TDPAALPAETVLRMATINGAKSVLW 387 (420)
Q Consensus 347 ~~~~~~~~~~~~~~~~--------~~~~~ls~~~al~~~T~~~A~~lgl 387 (420)
..... ...+..++ ..+.|++-+.+=+++-.||++++..
T Consensus 269 ~~~~~---~~~~g~~~I~~~fIP~Lk~~Gvde~~i~~mlvdNP~r~f~~ 314 (316)
T COG1735 269 SMLKA---NGGWGYGYILNDFIPRLKRHGVDEETIDTMLVDNPARLFTA 314 (316)
T ss_pred hhhhh---cCCcccchhhHhhHHHHHHcCCCHHHHHHHHhhCHHHHhcc
Confidence 10000 00110001 1246899777777888899999865
No 136
>PF01026 TatD_DNase: TatD related DNase The Pfam entry finds members not in the Prosite definition.; InterPro: IPR001130 This family of proteins are related to a large superfamily of metalloenzymes []. TatD, a member of this family has been shown experimentally to be a DNase enzyme []. Allantoinase 3.5.2.5 from EC, N-isopropylammelide isopropyl amidohydrolase 3.5.1 from EC and the SCN1 protein from fission yeast belong to this family.; GO: 0016888 endodeoxyribonuclease activity, producing 5'-phosphomonoesters; PDB: 3E2V_B 1XWY_A 3GUW_D 3RCM_A 1ZZM_A 2XIO_A 1J6O_A 2GZX_A 3IPW_A 2Y1H_A ....
Probab=98.12 E-value=0.00013 Score=64.38 Aligned_cols=216 Identities=12% Similarity=0.061 Sum_probs=113.4
Q ss_pred HHHHhCCcceeeeCCccC--HHHHHHHHHHhCCeeEeeehhccCCCCCCcccccCChhHHHHHHHHHHHHhcCCCCCceE
Q 014702 132 IELIHSGVTCFAEAGGQH--VSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIR 209 (420)
Q Consensus 132 ~~~~~~Gvtt~~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 209 (420)
..+...|++.++..+... .....+.....+.+...+.++ -+.+.............++ ..+....--.|+
T Consensus 21 ~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~Gi-------HP~~~~~~~~~~~~~l~~l-~~~~~~~~~aIG 92 (255)
T PF01026_consen 21 ERAREAGVSAIIIVSTDPEDWERVLELASQYPDRVYPALGI-------HPWEAHEVNEEDLEELEEL-INLNRPKVVAIG 92 (255)
T ss_dssp HHHHHTTEEEEEEEESSHHHHHHHHHHHHHTTTEEEEEE----------GGGGGGHSHHHHHHHHHH-HHHTSTTEEEEE
T ss_pred HHHHHcCCCEEEEcCCCHHHhHHHHHHHhcCCCeEEEEecC-------CcchhhhhhHHHHHHHHHH-HHhccccceeee
Confidence 567789999987655332 233344445555544433332 2222111122233333333 222222111121
Q ss_pred EEEeeccccc------cCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCChHHHHHHhccCCCccceeecc
Q 014702 210 IWFGIRQIMN------ATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTV 283 (420)
Q Consensus 210 ~~~~~~~~~~------~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~ 283 (420)
- +|+..... .-.+.+++.+++|.++++++.+|+-.... ...+++......+ ..++.|+.
T Consensus 93 E-iGLD~~~~~~~~~~~Q~~vF~~ql~lA~~~~~pv~iH~r~a~~-------------~~l~il~~~~~~~-~~~i~H~f 157 (255)
T PF01026_consen 93 E-IGLDYYWRNEEDKEVQEEVFERQLELAKELNLPVSIHCRKAHE-------------ELLEILKEYGPPN-LRVIFHCF 157 (255)
T ss_dssp E-EEEETTTTSSSGHHHHHHHHHHHHHHHHHHTCEEEEEEESHHH-------------HHHHHHHHTTGGT-SEEEETT-
T ss_pred e-eccCcccccCCcHHHHHHHHHHHHHHHHHhCCcEEEecCCcHH-------------HHHHHHHhccccc-eeEEEecC
Confidence 1 34433111 12345788899999999999999976221 1333344444211 15678998
Q ss_pred CCChhhHHHHHhcCCeEEECccchhhccCcccHHHHHHc--CCcEEEccCCCCCC---------CCCCHHHHHHHHHHHh
Q 014702 284 WVNHTEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHA--DICVSLGTDGAPSN---------NRMSIVDEMYLASLIN 352 (420)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~--gv~~~lgsD~~~~~---------~~~~~~~~~~~~~~~~ 352 (420)
.-+.+.++.+.+.|..+.+.+....+. ....+++++. .-.+.+-||.|-.. ....+...+......
T Consensus 158 ~g~~~~~~~~~~~g~~~S~~~~~~~~~--~~~~~~~~~~ip~drillETD~P~~~~~~~~~~~~~p~~i~~~~~~la~~- 234 (255)
T PF01026_consen 158 SGSPEEAKKFLDLGCYFSFSGAITFKN--SKKVRELIKAIPLDRILLETDAPYLAPDPYRGKPNEPSNIPKVAQALAEI- 234 (255)
T ss_dssp -S-HHHHHHHHHTTEEEEEEGGGGSTT--SHHHHHHHHHS-GGGEEEE-BTTSSECTTSTTSE--GGGHHHHHHHHHHH-
T ss_pred CCCHHHHHHHHhcCceEEecccccccc--cHHHHHHHhcCChhhEEEcCCCCcCCccccCCCCCChHHHHHHHHHHHHH-
Confidence 888999999989999888877544311 1124444433 13588899985311 111122222222221
Q ss_pred cccccccCCCCCCCCCCHHHHHHHHhHHHHHHcc
Q 014702 353 KGREVFANGTTDPAALPAETVLRMATINGAKSVL 386 (420)
Q Consensus 353 ~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lg 386 (420)
.+++.+++.+....|..+++|
T Consensus 235 -------------~~~~~e~~~~~~~~N~~r~f~ 255 (255)
T PF01026_consen 235 -------------KGISLEELAQIIYENAKRLFG 255 (255)
T ss_dssp -------------HTSTHHHHHHHHHHHHHHHHT
T ss_pred -------------cCCCHHHHHHHHHHHHHHHhC
Confidence 149999999999999988875
No 137
>COG0084 TatD Mg-dependent DNase [DNA replication, recombination, and repair]
Probab=98.10 E-value=0.00058 Score=59.28 Aligned_cols=137 Identities=15% Similarity=0.073 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCCChhhHHHHHhcCCeEEE
Q 014702 223 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSH 302 (420)
Q Consensus 223 ~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~ 302 (420)
+.+++.+++|++.++|+.+|+-....+ ..+++..... ....+.||..-+.+..+.+.+.|..+.+
T Consensus 112 ~~F~~ql~lA~~~~lPviIH~R~A~~d-------------~~~iL~~~~~--~~~gi~HcFsGs~e~a~~~~d~G~yisi 176 (256)
T COG0084 112 EVFEAQLELAKELNLPVIIHTRDAHED-------------TLEILKEEGA--PVGGVLHCFSGSAEEARKLLDLGFYISI 176 (256)
T ss_pred HHHHHHHHHHHHcCCCEEEEccccHHH-------------HHHHHHhcCC--CCCEEEEccCCCHHHHHHHHHcCeEEEE
Confidence 457888999999999999999663222 2223333332 3455889999899999999999988777
Q ss_pred CccchhhccCcccHHHHHHcC--CcEEEccCCCCCCC------CCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHH
Q 014702 303 CPASAMRMLGFAPIKEMLHAD--ICVSLGTDGAPSNN------RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVL 374 (420)
Q Consensus 303 ~p~~~~~~~~~~~~~~~~~~g--v~~~lgsD~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al 374 (420)
.+...... ....+++.+.= -.+.+=||+|-..+ ...+..-...+..+... .+++.+++.
T Consensus 177 sG~itfk~--a~~~~ev~~~iPldrLL~ETDsPyl~P~p~rGkrNeP~~v~~v~~~iAel-----------k~~~~eeva 243 (256)
T COG0084 177 SGIVTFKN--AEKLREVARELPLDRLLLETDAPYLAPVPYRGKRNEPAYVRHVAEKLAEL-----------KGISAEEVA 243 (256)
T ss_pred CceeecCC--cHHHHHHHHhCCHhHeEeccCCCCCCCcCCCCCCCCchHHHHHHHHHHHH-----------hCCCHHHHH
Confidence 65543222 11233333221 23667799874211 11122212222222221 259999999
Q ss_pred HHHhHHHHHHccC
Q 014702 375 RMATINGAKSVLW 387 (420)
Q Consensus 375 ~~~T~~~A~~lgl 387 (420)
+..|.|.-+++++
T Consensus 244 ~~t~~N~~~lf~~ 256 (256)
T COG0084 244 EITTENAKRLFGL 256 (256)
T ss_pred HHHHHHHHHHhcC
Confidence 9999999888864
No 138
>COG1099 Predicted metal-dependent hydrolases with the TIM-barrel fold [General function prediction only]
Probab=98.08 E-value=0.00079 Score=55.45 Aligned_cols=137 Identities=10% Similarity=0.077 Sum_probs=82.9
Q ss_pred HHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCCChhhHHHHHhcCCe--E
Q 014702 223 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVK--V 300 (420)
Q Consensus 223 ~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~--~ 300 (420)
+.+.+.+++|+++++++.+|.-........ ...++.+...++-....++.|+ +.+.++.+.+.+.. +
T Consensus 114 evf~~QL~LA~e~dvPviVHTPr~nK~e~t--------~~ildi~~~~~l~~~lvvIDH~---N~etv~~vld~e~~vGl 182 (254)
T COG1099 114 EVFREQLELARELDVPVIVHTPRRNKKEAT--------SKILDILIESGLKPSLVVIDHV---NEETVDEVLDEEFYVGL 182 (254)
T ss_pred HHHHHHHHHHHHcCCcEEEeCCCCcchhHH--------HHHHHHHHHcCCChhheehhcc---cHHHHHHHHhccceEEE
Confidence 457788999999999999999654322111 1134445555555555566666 55777766666544 6
Q ss_pred EECccchhhccCcccHHHHHHcC-CcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhH
Q 014702 301 SHCPASAMRMLGFAPIKEMLHAD-ICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATI 379 (420)
Q Consensus 301 ~~~p~~~~~~~~~~~~~~~~~~g-v~~~lgsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~ 379 (420)
+++|.-. .......-..+.| -++.+.||..... .++..--+.+..+.. .|++.+++-+.+-.
T Consensus 183 TvqPgKl---t~~eAveIV~ey~~~r~ilnSD~~s~~--sd~lavprtal~m~~------------~gv~~~~i~kV~~~ 245 (254)
T COG1099 183 TVQPGKL---TVEEAVEIVREYGAERIILNSDAGSAA--SDPLAVPRTALEMEE------------RGVGEEEIEKVVRE 245 (254)
T ss_pred EecCCcC---CHHHHHHHHHHhCcceEEEeccccccc--ccchhhhHHHHHHHH------------hcCCHHHHHHHHHH
Confidence 6777322 1111122233445 6788999976432 244444455544432 46888988888888
Q ss_pred HHHHHccC
Q 014702 380 NGAKSVLW 387 (420)
Q Consensus 380 ~~A~~lgl 387 (420)
|+-+++|+
T Consensus 246 NA~~~~~l 253 (254)
T COG1099 246 NALSFYGL 253 (254)
T ss_pred HHHHHhCc
Confidence 88888876
No 139
>PF00449 Urease_alpha: Urease alpha-subunit, N-terminal domain; InterPro: IPR011612 Urease (urea amidohydrolase, 3.5.1.5 from EC) catalyses the hydrolysis of urea to form ammonia and carbamate. The subunit composition of urease from different sources varies [], but each holoenzyme consists of four structural domains []: three structural domains and a nickel-binding catalytic domain common to amidohydrolases []. Urease is unique among nickel metalloenzymes in that it catalyses a hydrolysis rather than a redox reaction. In Helicobacter pylori, the gamma and beta domains are fused and called the alpha subunit (IPR008223 from INTERPRO). The catalytic subunit (called beta or B) has the same organisation as the Klebsiella alpha subunit. Jack bean (Canavalia ensiformis) urease has a fused gamma-beta-alpha organisation (IPR008221 from INTERPRO). The N-terminal domain is a composite domain and plays a major trimer stabilising role by contacting the catalytic domain of the symmetry related alpha-subunit []. ; GO: 0009039 urease activity, 0016151 nickel ion binding, 0019627 urea metabolic process; PDB: 3LA4_A 2UBP_C 3UBP_C 1UBP_C 1S3T_C 1IE7_C 4UBP_C 1E9Y_B 1E9Z_B 3QGA_O ....
Probab=97.08 E-value=0.0014 Score=47.67 Aligned_cols=37 Identities=22% Similarity=0.413 Sum_probs=29.4
Q ss_pred CceEEEEecEEEeecCCceeeeceeEEEECCEEEEEcCChh
Q 014702 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSAD 58 (420)
Q Consensus 18 ~~~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~~~ 58 (420)
..|++|.|+.|+ |. .-+..+||.|+||+|+.||++..
T Consensus 65 ~lD~VItNa~Ii--D~--~GI~KADIGIkdG~I~gIGkAGN 101 (121)
T PF00449_consen 65 ALDLVITNALII--DY--TGIVKADIGIKDGRIVGIGKAGN 101 (121)
T ss_dssp C-SEEEEEEEEE--ET--TEEEEEEEEEETTEEEEEE-EB-
T ss_pred cccEEEeCcEEE--ec--CCcEEeeEEeeCCEEEEEeccCC
Confidence 679999999999 54 23578999999999999999654
No 140
>cd01311 PDC_hydrolase 2-pyrone-4,6-dicarboxylic acid (PDC) hydrolase hydrolyzes PDC to yield 4-oxalomesaconic acid (OMA) or its tautomer, 4-carboxy-2-hydroxymuconic acid (CHM). This reaction is part of the protocatechuate (PCA) 4,5-cleavage pathway. PCA is one of the most important intermediate metabolites in the bacterial pathways for various phenolic compounds, including lignin, which is the most abundant aromatic material in nature.
Probab=96.90 E-value=0.18 Score=44.71 Aligned_cols=100 Identities=17% Similarity=0.153 Sum_probs=54.3
Q ss_pred CHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCCCh------hh----H
Q 014702 221 TDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH------TE----I 290 (420)
Q Consensus 221 ~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~------~~----~ 290 (420)
+.+.+..+.+.+.++|+++.+|+...... ....++..+ +.++++.|...... .. +
T Consensus 108 ~~~~~~~~~~~~~~~gl~v~~~~~~~~l~------------~l~~l~~~~---~l~ivldH~G~p~~~~~~~~~~~~~~l 172 (263)
T cd01311 108 NKDELDEIAKRAAELGWHVQVYFDAVDLP------------ALLPFLQKL---PVAVVIDHFGRPDVTKGVDGAEFAALL 172 (263)
T ss_pred CHHHHHHHHHHHHHcCCEEEEEeCHhhHH------------HHHHHHHHC---CCCEEEECCCCCCCCCCCCCHhHHHHH
Confidence 66677888899999999999998542111 122233333 56688899765330 12 2
Q ss_pred HHHHhcCCeEEECccchhhccC-----c-ccHHHHHHcC-CcEEEccCCCCC
Q 014702 291 GLLSRAGVKVSHCPASAMRMLG-----F-APIKEMLHAD-ICVSLGTDGAPS 335 (420)
Q Consensus 291 ~~~~~~~~~~~~~p~~~~~~~~-----~-~~~~~~~~~g-v~~~lgsD~~~~ 335 (420)
+.++..++.+.++-........ . +-++.+.+.| -+++.|||+|..
T Consensus 173 ~~l~~pNV~~k~Sg~~~~~~~~~~~~~~~~~~~~~~~~g~dRlmfGSD~P~~ 224 (263)
T cd01311 173 KLIEEGNVWVKVSGPYRLSVKQEAYADVIAFARQIVAAAPDRLVWGTDWPHP 224 (263)
T ss_pred HHHhcCCEEEEecchhhcCCCCCCHHHHHHHHHHHHHhCCCcEEEeCCCCCC
Confidence 3332234555444321110000 1 1122333445 568899999864
No 141
>TIGR01429 AMP_deaminase AMP deaminase. This model describes AMP deaminase, a large, well-conserved eukaryotic protein involved in energy metabolism. Most members of the family have an additional, poorly alignable region of 150 amino acids or more N-terminal to the region included in the model.
Probab=96.85 E-value=0.033 Score=54.24 Aligned_cols=98 Identities=17% Similarity=0.176 Sum_probs=69.8
Q ss_pred cceeeccCCCh--hhHHHHHhcCCeEEECccchhhc---cCcccHHHHHHcCCcEEEccCCCCCCCC--CCHHHHHHHHH
Q 014702 277 LLSAHTVWVNH--TEIGLLSRAGVKVSHCPASAMRM---LGFAPIKEMLHADICVSLGTDGAPSNNR--MSIVDEMYLAS 349 (420)
Q Consensus 277 ~~~~h~~~~~~--~~~~~~~~~~~~~~~~p~~~~~~---~~~~~~~~~~~~gv~~~lgsD~~~~~~~--~~~~~~~~~~~ 349 (420)
..+.||..+.. ....++...++.+.+||.++... -...|++++++.|++++|+||.+..... ..+.++...+.
T Consensus 462 dRIgHGi~l~~dp~L~yl~~~~qI~LevCPtSN~~l~~~y~~HP~~~~~~~Gl~VSLsTDDPl~f~~T~epL~EEY~~aa 541 (611)
T TIGR01429 462 HGINHGILLRKVPVLQYLYYLTQIPIAMSPLSNNSLFLEYSKNPLPEYLHKGLNVSLSTDDPLQFHYTKEALMEEYAIAA 541 (611)
T ss_pred cccccceecCCCHHHHHHHHHcCCeEEEcCCcchhhccChhhChHHHHHHCCCeEEEcCCCchhhCCCCCcHHHHHHHHH
Confidence 34689988753 33455678999999999998644 2246899999999999999999864322 24667766664
Q ss_pred HHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCC
Q 014702 350 LINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDN 389 (420)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~ 389 (420)
... ++|..++ ..++.|+.+..++++
T Consensus 542 ~~~--------------~Ls~~Dl-~eLarNSV~~S~~~~ 566 (611)
T TIGR01429 542 QVW--------------KLSTCDM-CELARNSVLQSGFEH 566 (611)
T ss_pred HHh--------------CCCHHHH-HHHHHHHHHHhCCCH
Confidence 432 3888774 445677878777653
No 142
>PLN03055 AMP deaminase; Provisional
Probab=96.84 E-value=0.014 Score=56.45 Aligned_cols=98 Identities=17% Similarity=0.094 Sum_probs=71.9
Q ss_pred cceeeccCCC--hhhHHHHHhcCCeEEECccchhhc---cCcccHHHHHHcCCcEEEccCCCCCCCC--CCHHHHHHHHH
Q 014702 277 LLSAHTVWVN--HTEIGLLSRAGVKVSHCPASAMRM---LGFAPIKEMLHADICVSLGTDGAPSNNR--MSIVDEMYLAS 349 (420)
Q Consensus 277 ~~~~h~~~~~--~~~~~~~~~~~~~~~~~p~~~~~~---~~~~~~~~~~~~gv~~~lgsD~~~~~~~--~~~~~~~~~~~ 349 (420)
..+.||..+. +..+.+++..++.+.+||.++... -...|+..+++.|++++|+||.+...+. ..+.++...+.
T Consensus 440 ~RIgHGi~l~~dP~L~yl~~~~qI~LevCPlSN~~l~~~y~~HP~~~~~~~Gl~VSInTDDPl~f~tT~epL~eEY~~aa 519 (602)
T PLN03055 440 HNIAHGNNLRKSPGLQYLYYLAQIGLAMSPLSNNSLFLDYHRNPFPMFFARGLNVSLSTDDPLQIHLTKEPLVEEYSIAA 519 (602)
T ss_pred ceecCccccCCCHHHHHHHHHcCCeEEEccCcchhhccchhhChHHHHHHCCCEEEEcCCCcchhcCCCCcHHHHHHHHH
Confidence 3467988764 455778889999999999998644 2246999999999999999999865332 14667776665
Q ss_pred HHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCC
Q 014702 350 LINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDN 389 (420)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~ 389 (420)
... ++|..+. ..++.|+.+..++++
T Consensus 520 ~~~--------------~LS~~DL-~eLarNSV~~Sf~~~ 544 (602)
T PLN03055 520 QVW--------------KLSSCDL-CEIARNSVLQSGFPH 544 (602)
T ss_pred HHh--------------CCCHHHH-HHHHHHHHHHhcCCH
Confidence 432 3888885 556788888877753
No 143
>cd01319 AMPD AMP deaminase (AMPD) catalyzes the hydrolytic deamination of adensosine monophosphate (AMP) at position 6 of the adenine nucleotide ring. AMPD is a diverse and highly regulated eukaryotic key enzyme of the adenylate catabolic pathway.
Probab=96.84 E-value=0.015 Score=55.38 Aligned_cols=98 Identities=15% Similarity=0.141 Sum_probs=70.4
Q ss_pred cceeeccCCChhh--HHHHHhcCCeEEECccchhhc---cCcccHHHHHHcCCcEEEccCCCCCCCC--CCHHHHHHHHH
Q 014702 277 LLSAHTVWVNHTE--IGLLSRAGVKVSHCPASAMRM---LGFAPIKEMLHADICVSLGTDGAPSNNR--MSIVDEMYLAS 349 (420)
Q Consensus 277 ~~~~h~~~~~~~~--~~~~~~~~~~~~~~p~~~~~~---~~~~~~~~~~~~gv~~~lgsD~~~~~~~--~~~~~~~~~~~ 349 (420)
..+.||..+.... ..++...++.+.+||.++... -...|+..+++.|++++|+||.+..... ..+.++...+.
T Consensus 350 dRIGHGv~l~~dp~L~~l~~~~qI~levCPlSN~~l~~~~~~HP~~~~l~~Gl~VsInTDDPl~f~~t~~~L~eEY~~a~ 429 (496)
T cd01319 350 HGISHGINLRKVPVLQYLYYLTQIGIAMSPLSNNSLFLSYEKNPFPEFFKRGLNVSLSTDDPLQFHFTKEPLMEEYSIAA 429 (496)
T ss_pred cccccccccCCCHHHHHHHHHcCCeEEEecCccHhhhcCcccChHHHHHHCCCeEEEeCCCchhhCCCCCcHHHHHHHHH
Confidence 4478998875433 445667899999999998644 2246999999999999999999864322 24667776664
Q ss_pred HHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCC
Q 014702 350 LINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDN 389 (420)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~ 389 (420)
... ++|..++ ..++.|+.+..++++
T Consensus 430 ~~~--------------~Ls~~Dl-~eLarNSV~~Sf~~~ 454 (496)
T cd01319 430 QVW--------------KLSTCDM-CELARNSVLQSGFEH 454 (496)
T ss_pred HHc--------------CCCHHHH-HHHHHHHHHHhCCCH
Confidence 432 3888774 566778888777653
No 144
>PLN02768 AMP deaminase
Probab=96.23 E-value=0.064 Score=53.46 Aligned_cols=96 Identities=18% Similarity=0.135 Sum_probs=69.3
Q ss_pred ceeeccCCC--hhhHHHHHhcCCeEEECccchhhc---cCcccHHHHHHcCCcEEEccCCCCCCCCC--CHHHHHHHHHH
Q 014702 278 LSAHTVWVN--HTEIGLLSRAGVKVSHCPASAMRM---LGFAPIKEMLHADICVSLGTDGAPSNNRM--SIVDEMYLASL 350 (420)
Q Consensus 278 ~~~h~~~~~--~~~~~~~~~~~~~~~~~p~~~~~~---~~~~~~~~~~~~gv~~~lgsD~~~~~~~~--~~~~~~~~~~~ 350 (420)
.+.|+..+. +....++...++.+.+||.++... -...|++++++.|++++|+||.+...+.. .+.++...+..
T Consensus 674 RIgHGv~l~kdP~LqyL~~l~qIgLevCPlSN~~l~~~y~~HPf~~f~~~GL~VSLNTDDPL~fhtT~epL~EEYsvAak 753 (835)
T PLN02768 674 NIAHGINLRKSPVLQYLYYLAQIGLAMSPLSNNSLFLDYHRNPFPMFFLRGLNVSLSTDDPLQIHLTKEPLVEEYSIAAS 753 (835)
T ss_pred ccCCccccCcCHHHHHHHHHcCCeEEECCCcchhhhcchhhChHHHHHHCCCEEEEcCCCccccCCCCCCHHHHHHHHHH
Confidence 457988764 334556777899999999998644 22469999999999999999998653322 46677766654
Q ss_pred HhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCC
Q 014702 351 INKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 388 (420)
Q Consensus 351 ~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~ 388 (420)
.. ++|..++.+ ++.|..+..+++
T Consensus 754 ~~--------------~LS~~DL~E-LarNSV~aSff~ 776 (835)
T PLN02768 754 VW--------------KLSSCDLCE-IARNSVYQSGFS 776 (835)
T ss_pred Hh--------------CcCHHHHHH-HHHHHHHHhcCC
Confidence 32 388877554 467777777765
No 145
>PRK06361 hypothetical protein; Provisional
Probab=96.16 E-value=0.34 Score=41.31 Aligned_cols=96 Identities=14% Similarity=0.062 Sum_probs=61.8
Q ss_pred cceeeccCCChhhHHHHHhcCCeEEECccchhhccCcccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhcccc
Q 014702 277 LLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGRE 356 (420)
Q Consensus 277 ~~~~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~gv~~~lgsD~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (420)
.++.|-..+..+.++.+++.++.+.++...........-++...+.|++++++||.-.. . +.. .+..+..+.
T Consensus 115 dvlaHpd~~~~~~~~~~~~~~~~lEin~~~~~~~~~~~~l~~a~~~gi~vv~~SDaH~~-~--d~~-~~~~~~~i~---- 186 (212)
T PRK06361 115 DILAHPGLITEEEAELAAENGVFLEITARKGHSLTNGHVARIAREAGAPLVINTDTHAP-S--DLI-TYEFARKVA---- 186 (212)
T ss_pred cEecCcchhhHHHHHHHHHcCeEEEEECCCCcccchHHHHHHHHHhCCcEEEECCCCCH-H--HHH-HHHHHHHHH----
Confidence 46788877777778889999988887642111111112334455679999999996521 1 222 222222221
Q ss_pred cccCCCCCCCCCCHHHHHHHHhHHHHHHccC
Q 014702 357 VFANGTTDPAALPAETVLRMATINGAKSVLW 387 (420)
Q Consensus 357 ~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl 387 (420)
...+++.++++.+.+.||+.+++.
T Consensus 187 -------~~~gl~~~~v~~~~~~~~~~~~~~ 210 (212)
T PRK06361 187 -------LGAGLTEKELEEALENNPKLLLKR 210 (212)
T ss_pred -------cCCCCCHHHHHHHHHHhHHHHHHh
Confidence 234699999999999999999864
No 146
>PTZ00310 AMP deaminase; Provisional
Probab=95.93 E-value=0.087 Score=55.92 Aligned_cols=97 Identities=18% Similarity=0.164 Sum_probs=71.1
Q ss_pred cceeeccCCC--hhhHHHHHhcCCeEEECccchhhc---cCcccHHHHHHcCCcEEEccCCCCCCCCC--CHHHHHHHHH
Q 014702 277 LLSAHTVWVN--HTEIGLLSRAGVKVSHCPASAMRM---LGFAPIKEMLHADICVSLGTDGAPSNNRM--SIVDEMYLAS 349 (420)
Q Consensus 277 ~~~~h~~~~~--~~~~~~~~~~~~~~~~~p~~~~~~---~~~~~~~~~~~~gv~~~lgsD~~~~~~~~--~~~~~~~~~~ 349 (420)
..+.||..+. +..+.++...++.+.+||.++... -...|+.++++.|++++|+||.+...... .+.++...+.
T Consensus 1133 ~RIgHGi~l~~dp~L~yl~~l~qI~LevCPlSN~~l~~sy~~hP~~~f~~~Gl~VSLnTDDPl~f~tT~EpL~eEYsiaa 1212 (1453)
T PTZ00310 1133 NSICHGINLRNDPPMQYLYYLAQIGLHVSPLSNNALFLAFLENPFPVFFHRGLNVSLSTDDPLMFHQTQEPLIEEYSIAA 1212 (1453)
T ss_pred ccccchhhhCcCHHHHHHHHHcCCeEEECCCchHhhhhchhhCcHHHHHHCCCEEEECCCCccccCCCcccHHHHHHHHH
Confidence 3478998874 344567888999999999998644 22469999999999999999998653321 2667766664
Q ss_pred HHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCC
Q 014702 350 LINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 388 (420)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~ 388 (420)
... ++|..+..+ +..|+....|.+
T Consensus 1213 ~~~--------------~LS~~Dl~e-larNSV~~SGf~ 1236 (1453)
T PTZ00310 1213 RVW--------------GLSLNDLCE-IARNSVLQSGFD 1236 (1453)
T ss_pred HHh--------------CCCHHHHHH-HHHHHHHHcCCC
Confidence 432 388888554 467888888875
No 147
>PTZ00310 AMP deaminase; Provisional
Probab=94.92 E-value=0.17 Score=53.92 Aligned_cols=97 Identities=13% Similarity=0.097 Sum_probs=68.6
Q ss_pred ceeeccCCChh-hHH-HHHhcCCeEEECccchhhcc----CcccHHHHHHcCCcEEEccCCCCCCCCC--CHHHHHHHHH
Q 014702 278 LSAHTVWVNHT-EIG-LLSRAGVKVSHCPASAMRML----GFAPIKEMLHADICVSLGTDGAPSNNRM--SIVDEMYLAS 349 (420)
Q Consensus 278 ~~~h~~~~~~~-~~~-~~~~~~~~~~~~p~~~~~~~----~~~~~~~~~~~gv~~~lgsD~~~~~~~~--~~~~~~~~~~ 349 (420)
.+.|+..+.+. .+. ++...++.+.+||.++.... ...|++++++.|++++++||.+...+.. .+.++...+.
T Consensus 504 RI~HGi~l~d~p~LqyL~~e~qI~LeVCPlSN~~l~v~sy~~HPi~~fl~~GL~VSLNTDDPl~F~tt~EpL~EEY~iaa 583 (1453)
T PTZ00310 504 VITRATSIADYPVLQYLCGLHRVGLTVSPLRDHALSITAYFDHPLPKFLHRCLRVSISTSDPLYFHHHSQPLIEEYATAM 583 (1453)
T ss_pred cccchhccCchHHHHHHHHHcCCeEEECCCcccccCCCchhhCcHHHHHHCCCEEEECCCCccccCCCCccHHHHHHHHH
Confidence 46788766543 344 44489999999999986542 2469999999999999999998754332 3667776664
Q ss_pred HHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHccCCC
Q 014702 350 LINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDN 389 (420)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~ 389 (420)
... ++|..++. .++.|+....++++
T Consensus 584 q~~--------------gLS~~DL~-eLarNSV~aSf~~~ 608 (1453)
T PTZ00310 584 KLF--------------SLSPLDTT-ELARNSVLNSSFPP 608 (1453)
T ss_pred HHh--------------CcCHHHHH-HHHHHHHHHhCCCH
Confidence 432 48887754 45777777777653
No 148
>COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=93.49 E-value=5.1 Score=36.07 Aligned_cols=143 Identities=17% Similarity=0.128 Sum_probs=76.5
Q ss_pred CHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCChHHHHHHhc-cCCCccceeecc--CCC-hhhHHHHHh-
Q 014702 221 TDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIE-FLQNNLLSAHTV--WVN-HTEIGLLSR- 295 (420)
Q Consensus 221 ~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~h~~--~~~-~~~~~~~~~- 295 (420)
++..+..+.+.|.++|+++.+|...+......... ...+..+.+.+. ..+-++++.|+. ..= .+.+.....
T Consensus 142 ~~~~~~pi~~~a~~~gvpv~ihtG~~~~~~~~~~~----~~~p~~~~~va~~fP~l~IVl~H~G~~~p~~~~a~~~a~~~ 217 (293)
T COG2159 142 DDPRLYPIYEAAEELGVPVVIHTGAGPGGAGLEKG----HSDPLYLDDVARKFPELKIVLGHMGEDYPWELEAIELAYAH 217 (293)
T ss_pred CChHHHHHHHHHHHcCCCEEEEeCCCCCCcccccC----CCCchHHHHHHHHCCCCcEEEEecCCCCchhHHHHHHHHhC
Confidence 44457888999999999999999886543211110 111222222222 235568889986 221 222222222
Q ss_pred cCCeEEECccchhhccCcc--cHHHHHHcC-CcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHH
Q 014702 296 AGVKVSHCPASAMRMLGFA--PIKEMLHAD-ICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAET 372 (420)
Q Consensus 296 ~~~~~~~~p~~~~~~~~~~--~~~~~~~~g-v~~~lgsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~ 372 (420)
.++.+.+.-..- .... -+..+.+.+ -++.+|||+|... +. ...+... ..+++.+.
T Consensus 218 ~nvy~d~s~~~~---~~~~~~~~~~~~~~~~dkilFGSD~P~~~----~~--~~l~~~~-------------~l~l~~e~ 275 (293)
T COG2159 218 PNVYLDTSGVRP---KYFAPPLLEFLKELGPDKILFGSDYPAIH----PE--VWLAELD-------------ELGLSEEV 275 (293)
T ss_pred CCceeeeecccc---ccCChHHHHHHHhcccCeEEecCCCCCcC----HH--HHHHHHH-------------hcCCCHHH
Confidence 233333221110 1111 234444423 6799999976532 21 1222111 12488888
Q ss_pred HHHHHhHHHHHHccCCC
Q 014702 373 VLRMATINGAKSVLWDN 389 (420)
Q Consensus 373 al~~~T~~~A~~lgl~~ 389 (420)
.-+.+-.|++|++++..
T Consensus 276 k~kiL~~NA~rll~l~~ 292 (293)
T COG2159 276 KEKILGENAARLLGLDP 292 (293)
T ss_pred HHHHHHHhHHHHhCcCC
Confidence 89999999999999853
No 149
>PF12890 DHOase: Dihydro-orotase-like; InterPro: IPR024403 This entry represents a small family of dihydro-orotase-like proteins from bacteria.
Probab=92.57 E-value=0.038 Score=41.83 Aligned_cols=15 Identities=47% Similarity=1.052 Sum_probs=14.2
Q ss_pred CcEEeeccccccccc
Q 014702 75 SQILLPGFVNTHVHT 89 (420)
Q Consensus 75 g~~v~PGfID~H~H~ 89 (420)
|++++|||||.|+|+
T Consensus 1 ~kli~~g~vd~hVhl 15 (142)
T PF12890_consen 1 GKLILPGLVDVHVHL 15 (142)
T ss_pred Cceeehhhhhhhhhh
Confidence 689999999999999
No 150
>PF04909 Amidohydro_2: Amidohydrolase; InterPro: IPR006992 These proteins are related to the metal-dependent hydrolase superfamily []. The family includes 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase which converts alpha-amino-beta-carboxymuconate-epsilon- semialdehyde (ACMS) to alpha-aminomuconate semialdehyde (AMS). ACMS can be converted non-enzymatically to quinolate, a potent endogenous excitoxin of neuronal cells which is implicated in the pathogenesis of various neurodegenerative disorders. In the presence of AMCSD, ACMS is converted to AMS, a benign catabolite. 2-amino-3-(3-oxoprop-2-enyl)-but-2-enedioate = 2-aminomuconate semialdehyde + CO2. ; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2QPX_A 4D8L_A 3K4W_I 3IRS_B 4DZI_B 3S4T_G 2GWG_B 3IJ6_A 2DVX_C 2DVT_C ....
Probab=92.24 E-value=0.61 Score=41.32 Aligned_cols=161 Identities=12% Similarity=0.028 Sum_probs=76.6
Q ss_pred eEEEEeeccccccCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCC--
Q 014702 208 IRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV-- 285 (420)
Q Consensus 208 i~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~-- 285 (420)
+++..........++.....+.+.+.+++++|.+|+.............. ......++.. ..+-+.++.|+...
T Consensus 102 v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~~H~g~~~~~~~~~~~~~--~~~~~~~~~~--~P~l~ii~~H~G~~~~ 177 (273)
T PF04909_consen 102 VKLHPDLGGFDPDDPRLDDPIFEAAEELGLPVLIHTGMTGFPDAPSDPAD--PEELEELLER--FPDLRIILAHLGGPFP 177 (273)
T ss_dssp EEEESSETTCCTTSGHCHHHHHHHHHHHT-EEEEEESHTHHHHHHHHHHH--HHHHTTHHHH--STTSEEEESGGGTTHH
T ss_pred eEecCCCCccccccHHHHHHHHHHHHhhccceeeeccccchhhhhHHHHH--HHHHHHHHHH--hcCCeEEEecCcccch
Confidence 44433333344444444458899999999999999751110000000000 0000112222 23456788999886
Q ss_pred Chhh-HHHHHhc-CCeEEECccc-----hhhccCcccHHHHHHc-C-CcEEEccCCCCCCCCCCHHHHHHHHHHHhcccc
Q 014702 286 NHTE-IGLLSRA-GVKVSHCPAS-----AMRMLGFAPIKEMLHA-D-ICVSLGTDGAPSNNRMSIVDEMYLASLINKGRE 356 (420)
Q Consensus 286 ~~~~-~~~~~~~-~~~~~~~p~~-----~~~~~~~~~~~~~~~~-g-v~~~lgsD~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (420)
..++ +.++.+. ++.+...-.. .......+.+..+++. | -++.+|||++... ...............
T Consensus 178 ~~~~~~~l~~~~~nvy~d~s~~~~~~~~~~~~~~~~~l~~~~~~~g~drilfGSD~P~~~----~~~~~~~~~~~~~~~- 252 (273)
T PF04909_consen 178 WWEEALRLLDRFPNVYVDLSGIPPFWYFWPPSFDRPFLRRAVDEFGPDRILFGSDYPHPD----GASPYEYIWEAYFLD- 252 (273)
T ss_dssp HHHHHHHHHHHHTTEEEECHSHHSSEEEETTHHCHHHHHHHHHHHTGGGEEEE--TTSST----HHHHHHHHHHHHHHH-
T ss_pred hHHHHHHHHHhCCcccccccccccccccCcccccHHHHHHHHHHhCCceEEecCCCCCCC----ccccHHHHHHhhhcc-
Confidence 3333 3444443 3444332110 0000111234444433 4 5799999997642 211111111111000
Q ss_pred cccCCCCCCCCCCHHHHHHHHhHHHHHHccC
Q 014702 357 VFANGTTDPAALPAETVLRMATINGAKSVLW 387 (420)
Q Consensus 357 ~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl 387 (420)
.+|.++.-+.+..|+++++++
T Consensus 253 ----------~l~~~~~~~i~~~NA~rl~~l 273 (273)
T PF04909_consen 253 ----------DLSEEEREKILYDNARRLYGL 273 (273)
T ss_dssp ----------HSSHHHHHHHHTHHHHHHHTC
T ss_pred ----------CCCHHHHHHHHhHhHHHHcCc
Confidence 168899999999999999885
No 151
>PRK00912 ribonuclease P protein component 3; Provisional
Probab=90.21 E-value=3.1 Score=36.18 Aligned_cols=98 Identities=13% Similarity=0.101 Sum_probs=59.2
Q ss_pred ChhhHHHHHhcCCeEEECccchhh------ccCccc----HHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhccc
Q 014702 286 NHTEIGLLSRAGVKVSHCPASAMR------MLGFAP----IKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGR 355 (420)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~p~~~~~------~~~~~~----~~~~~~~gv~~~lgsD~~~~~~~~~~~~~~~~~~~~~~~~ 355 (420)
..+.++..+++|+.+.++-....+ .....| ++...+.|++++++||......-.++.+....+..
T Consensus 120 ~~~~~~~a~~~gv~lEIn~s~~~~~~~~~r~~~~~~~~~~~~~~~~~g~piiisSdAh~~~~l~~~~~~~~l~~~----- 194 (237)
T PRK00912 120 NHVLAKEAARNNVAIEFNLRDILKSRGGRRARTLSNFRDNLALARKYDFPLVLTSGAMSCYDLRSPREMIALAEL----- 194 (237)
T ss_pred CHHHHHHHHHCCeEEEEEchHhhhhcccHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCcccccCCHHHHHHHHHH-----
Confidence 345567788888887765432211 111222 23345669999999996543222233333333321
Q ss_pred ccccCCCCCCCCCCHHHHHHHHhHHHHHHccCC-CcccccccCc
Q 014702 356 EVFANGTTDPAALPAETVLRMATINGAKSVLWD-NDIGSLEAGK 398 (420)
Q Consensus 356 ~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~-~~~G~l~~G~ 398 (420)
.|++.++++.+++.+|.+++... .+.+.|..|.
T Consensus 195 ----------~Gl~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 228 (237)
T PRK00912 195 ----------FGMEEDEALKALSYYPESIIKKNRNRKNYVIEGV 228 (237)
T ss_pred ----------cCCCHHHHHHHHHHhHHHHHHhhccCCCcccccE
Confidence 35999999999999999987543 3456666664
No 152
>COG3618 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=85.57 E-value=25 Score=31.05 Aligned_cols=136 Identities=11% Similarity=0.043 Sum_probs=68.1
Q ss_pred HHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCChHHHHHHh-ccCCCccceeeccCCCh---------hhHHH
Q 014702 223 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKI-EFLQNNLLSAHTVWVNH---------TEIGL 292 (420)
Q Consensus 223 ~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~h~~~~~~---------~~~~~ 292 (420)
..+++.++...+.|+.+.++...... ...+... ...+.+.++.|+..... +.+.+
T Consensus 124 ~~~r~~~~rL~~~gl~fdl~~~~~ql---------------~~~i~l~~~~Pd~~~VldH~G~p~~~~~~~~~w~~~m~~ 188 (279)
T COG3618 124 PAWRANVERLAKLGLHFDLQVDPHQL---------------PDLIPLALKAPDVNFVLDHCGRPDIKINLEDPWKAALAR 188 (279)
T ss_pred HHHHHHHHHHHhcCCeEEEEeChhhh---------------HHHHHHHhhCCCCCEEeccCCCCCccccccCHHHHHHHH
Confidence 56777788888888888777754322 1111111 22335577888876521 12333
Q ss_pred HHhc-CCeEEECccchhhcc-----CcccHH-HHHH-cC-CcEEEccCCCCCCCCCCHHHHHHHHHHHhcccccccCCCC
Q 014702 293 LSRA-GVKVSHCPASAMRML-----GFAPIK-EMLH-AD-ICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTT 363 (420)
Q Consensus 293 ~~~~-~~~~~~~p~~~~~~~-----~~~~~~-~~~~-~g-v~~~lgsD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (420)
+++. ++.+...-...+... ...|+. .+++ -| -++..|||+|...-..++ ..+..+.. . .+
T Consensus 189 la~~pNv~~KlSG~~~~~~~~w~~~~v~p~~e~~i~~fg~dR~vfGSdwPv~~l~~~~-~~~~~~~~--~---~v----- 257 (279)
T COG3618 189 LARRPNVWAKLSGVYAYSDESWTVEDVRPYVEELIELFGWDRFVFGSDWPVTSLESDF-ASWVAATR--E---LV----- 257 (279)
T ss_pred HHhCCCeEEEEeeecccccCCCCHHHHHHHHHHHHHhcCccceEecCCCCcccccCCh-HHHHHHHH--H---Hc-----
Confidence 4333 333332211111101 111222 2222 25 679999999875322222 22211110 0 00
Q ss_pred CCCCCCHHHHHHHHhHHHHHHccC
Q 014702 364 DPAALPAETVLRMATINGAKSVLW 387 (420)
Q Consensus 364 ~~~~ls~~~al~~~T~~~A~~lgl 387 (420)
.+ +..+=-+....||++++++
T Consensus 258 --~~-~~~er~~i~~~NA~rly~~ 278 (279)
T COG3618 258 --PG-DAAERARILVDNARRLYRL 278 (279)
T ss_pred --CC-CHHHHHHHHhhCHHHHhCC
Confidence 12 5778889999999998875
No 153
>COG0418 PyrC Dihydroorotase [Nucleotide transport and metabolism]
Probab=81.92 E-value=15 Score=32.67 Aligned_cols=110 Identities=14% Similarity=0.170 Sum_probs=63.2
Q ss_pred HHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCChHHHHHHh--ccCCCccceeeccCCChhhHHHHHhcC--
Q 014702 222 DRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKI--EFLQNNLLSAHTVWVNHTEIGLLSRAG-- 297 (420)
Q Consensus 222 ~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~h~~~~~~~~~~~~~~~~-- 297 (420)
-+.+...++...+.|+++.+|-...........+-.. .....++.. .+.+-+++++|.. +.+.++.+++.+
T Consensus 117 ~~~~~pvle~Mq~~gmpLlvHGEvt~~~vDifdrE~~---Fi~~vl~pl~~~fP~LKIV~EHiT--T~dav~~v~~~~~n 191 (344)
T COG0418 117 IEKIYPVLEAMQKIGMPLLVHGEVTDAEVDIFDREAA---FIESVLEPLRQRFPKLKIVLEHIT--TKDAVEYVKDANNN 191 (344)
T ss_pred HHHHHHHHHHHHHcCCeEEEecccCCccccchhhHHH---HHHHHHHHHHhhCCcceEEEEEec--cHHHHHHHHhcCcc
Confidence 3456667777888999999998766543332211000 011122222 2344567889986 556677777776
Q ss_pred CeEEECccchhhc------cCc----------------ccHHHHHHcC-CcEEEccCCCCCC
Q 014702 298 VKVSHCPASAMRM------LGF----------------APIKEMLHAD-ICVSLGTDGAPSN 336 (420)
Q Consensus 298 ~~~~~~p~~~~~~------~~~----------------~~~~~~~~~g-v~~~lgsD~~~~~ 336 (420)
+..+++|.+.+.. .++ ..+.++.-+| -++.+|||..|+.
T Consensus 192 laATIT~hHL~~nrnd~l~Ggi~Ph~fClPilKr~~hr~AL~~aa~sg~~kfFlGtDSAPH~ 253 (344)
T COG0418 192 LAATITPHHLLLNRNDMLVGGIRPHLFCLPILKRETHREALREAATSGHPKFFLGTDSAPHA 253 (344)
T ss_pred eeeEeehhheeeehhhhhcCCCCcceeeeccccchhhHHHHHHHHhcCCCcEEecCCCCCCc
Confidence 5577777654211 121 1223343445 6799999998764
No 154
>COG4464 CapC Capsular polysaccharide biosynthesis protein [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=80.96 E-value=1.9 Score=35.88 Aligned_cols=19 Identities=11% Similarity=0.277 Sum_probs=14.7
Q ss_pred HHHHHHcCCcEEEccCCCC
Q 014702 316 IKEMLHADICVSLGTDGAP 334 (420)
Q Consensus 316 ~~~~~~~gv~~~lgsD~~~ 334 (420)
..+++++++.-.++||.-.
T Consensus 179 a~~~iE~~L~hFiASDAHn 197 (254)
T COG4464 179 ALQLIEANLVHFIASDAHN 197 (254)
T ss_pred HHHHHHcccceeeeccccc
Confidence 3567889988889999644
No 155
>COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog [Amino acid transport and metabolism]
Probab=79.57 E-value=30 Score=31.22 Aligned_cols=133 Identities=13% Similarity=0.067 Sum_probs=70.2
Q ss_pred HHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCChHHHHHHhccCCCcc---------ceeeccCCChhhHHHHHhc
Q 014702 226 LETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNL---------LSAHTVWVNHTEIGLLSRA 296 (420)
Q Consensus 226 ~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---------~~~h~~~~~~~~~~~~~~~ 296 (420)
+++++.+.+.|+.|.+....... ..+ .+...+..+ ++.|--.+++++++.+++.
T Consensus 152 k~lV~~~N~LgIiiDlSH~s~kt--------------~~D---vl~~s~~PviaSHSN~~al~~h~RNl~D~qlkaI~~~ 214 (313)
T COG2355 152 KELVREMNELGIIIDLSHLSDKT--------------FWD---VLDLSKAPVVASHSNARALVDHPRNLSDEQLKAIAET 214 (313)
T ss_pred HHHHHHHHhcCCEEEecccCCcc--------------HHH---HHhccCCceEEecCCchhccCCCCCCCHHHHHHHHhc
Confidence 56778889999988774433221 222 222233333 3445557888999999999
Q ss_pred CCeE--EECccchhhc-cCcccHHHHH-------Hc-C-CcEEEccCCCCCCC---CCCHHHHHHHHHHHhcccccccCC
Q 014702 297 GVKV--SHCPASAMRM-LGFAPIKEML-------HA-D-ICVSLGTDGAPSNN---RMSIVDEMYLASLINKGREVFANG 361 (420)
Q Consensus 297 ~~~~--~~~p~~~~~~-~~~~~~~~~~-------~~-g-v~~~lgsD~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 361 (420)
|..+ +..|...... ...+++..+. +. | -.+.||||.-.... ++.-...+... ....
T Consensus 215 gGvIgv~~~~~fl~~~~~~~atldd~v~hI~h~v~~~G~dhVglGsDf~g~~~~p~gled~~~l~~l--~~~L------- 285 (313)
T COG2355 215 GGVIGVNFIPAFLRPGGAARATLDDLVRHIDHFVELVGIDHVGLGSDFDGGTGPPDGLEDVGKLPNL--TAAL------- 285 (313)
T ss_pred CCEEEEEeehhhccCCCCCCCCHHHHHHHHHHHHHhcCcceeEecccccCCCCCchhhcChhHHHHH--HHHH-------
Confidence 7553 3333332210 0122333332 22 4 35899999753221 11111111111 1110
Q ss_pred CCCCCCCCHHHHHHHHhHHHHHHcc
Q 014702 362 TTDPAALPAETVLRMATINGAKSVL 386 (420)
Q Consensus 362 ~~~~~~ls~~~al~~~T~~~A~~lg 386 (420)
...|++-+++-+.+-.|--|++.
T Consensus 286 --~~~G~~e~~i~~i~~~N~lRV~~ 308 (313)
T COG2355 286 --IERGYSEEEIEKIAGENWLRVLK 308 (313)
T ss_pred --HHcCCCHHHHHHHHHHhHHHHHH
Confidence 12468888888888888777664
No 156
>KOG3020 consensus TatD-related DNase [Replication, recombination and repair]
Probab=79.02 E-value=36 Score=30.45 Aligned_cols=70 Identities=14% Similarity=0.178 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCCChhhHHHHHhcCCeEEEC
Q 014702 224 LLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHC 303 (420)
Q Consensus 224 ~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~ 303 (420)
.+++-+++|.+...|+.+|+-....+ ..+++.+....-.+-++.|++.-+.+++.++.+.++.+.+.
T Consensus 136 vFekQl~LA~~~~~Pl~iH~r~a~~d-------------~~eIl~~~~~~~~~~vvvHsFtGs~e~~~~~lk~~~yig~~ 202 (296)
T KOG3020|consen 136 VFEKQLDLAKRLKLPLFIHCRSAHED-------------LLEILKRFLPECHKKVVVHSFTGSAEEAQKLLKLGLYIGFT 202 (296)
T ss_pred HHHHHHHHHHHccCCeeeechhhhHH-------------HHHHHHHhccccCCceEEEeccCCHHHHHHHHHccEEeccc
Confidence 46888999999999999999662211 33334444333322567899999999999999998555544
Q ss_pred ccc
Q 014702 304 PAS 306 (420)
Q Consensus 304 p~~ 306 (420)
+..
T Consensus 203 g~~ 205 (296)
T KOG3020|consen 203 GCS 205 (296)
T ss_pred cee
Confidence 443
No 157
>cd01301 rDP_like renal dipeptidase (rDP), best studied in mammals and also called membrane or microsomal dipeptidase, is a membrane-bound glycoprotein hydrolyzing dipeptides and is involved in hydrolytic metabolism of penem and carbapenem beta-lactam antibiotics. Although the biological function of the enzyme is still unknown, it has been suggested to play a role in the renal glutathione metabolism.
Probab=78.45 E-value=53 Score=29.87 Aligned_cols=94 Identities=14% Similarity=0.123 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCChHHHHHHhccCCCccceee---------ccCCChhhHHHHH
Q 014702 224 LLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAH---------TVWVNHTEIGLLS 294 (420)
Q Consensus 224 ~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h---------~~~~~~~~~~~~~ 294 (420)
.=+++++...+.|+.+.+.+..... ..+.+......++.+| .-.+++++++.++
T Consensus 155 ~G~~vv~~mn~lGmiiDvSH~s~~~-----------------~~dv~~~s~~PviaSHsn~ral~~h~RNltD~~i~~ia 217 (309)
T cd01301 155 FGKELVREMNRLGIIIDLSHLSERT-----------------FWDVLDISNAPVIASHSNARALCDHPRNLTDAQLKAIA 217 (309)
T ss_pred HHHHHHHHHHHcCCEEEcCCCCHHH-----------------HHHHHHhcCCCEEEeccChHHhcCCCCCCCHHHHHHHH
Confidence 3356666777888877663333211 1222222333444444 4458899999999
Q ss_pred hcCCeEEECccchhhc-cCcccHHHH-------HH-cCC-cEEEccCCCC
Q 014702 295 RAGVKVSHCPASAMRM-LGFAPIKEM-------LH-ADI-CVSLGTDGAP 334 (420)
Q Consensus 295 ~~~~~~~~~p~~~~~~-~~~~~~~~~-------~~-~gv-~~~lgsD~~~ 334 (420)
+.|..+-++....+-. .....+..+ .+ .|+ .+++|||...
T Consensus 218 ~~GGvigi~~~~~fl~~~~~~~~~~~~~hi~~i~~l~G~dhVgiGsDfdg 267 (309)
T cd01301 218 ETGGVIGVNFYPAFLSPGADATLDDVVRHIDYIVDLIGIDHVGLGSDFDG 267 (309)
T ss_pred HcCCEEEEeeeHHHhCCCCCCCHHHHHHHHHHHHHhcCCCeEEECcccCC
Confidence 9987765554333211 112223222 22 354 4999999643
No 158
>PRK08609 hypothetical protein; Provisional
Probab=71.74 E-value=1.1e+02 Score=30.54 Aligned_cols=44 Identities=16% Similarity=0.159 Sum_probs=28.4
Q ss_pred HHHHHhcCCeEEECccchhhccCcccHHHHHHcCCcEEEccCCC
Q 014702 290 IGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHADICVSLGTDGA 333 (420)
Q Consensus 290 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~gv~~~lgsD~~ 333 (420)
++.+++.|+.+.+.............++.+.+.|+.+++|||.-
T Consensus 485 ~~~a~~~G~~lEINa~~~r~~~~~~~~~~~~e~Gv~i~igSDAH 528 (570)
T PRK08609 485 IELAKETNTALELNANPNRLDLSAEHLKKAQEAGVKLAINTDAH 528 (570)
T ss_pred HHHHHHhCCEEEEcCCccccCccHHHHHHHHHcCCEEEEECCCC
Confidence 45557788887766433211112234567788999999999964
No 159
>PF01244 Peptidase_M19: Membrane dipeptidase (Peptidase family M19); InterPro: IPR008257 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of peptidases belong to the MEROPS peptidase family M19 (membrane dipeptidase family, clan MJ). The protein fold of the peptidase domain for members of this family resembles that of Klebsiella urease, the type example for clan MJ. Renal dipeptidase (rDP) (3.4.13.19 from EC), also known as microsomal dipeptidase, is a zinc-dependent metalloenzyme that hydrolyzes a wide range of dipeptides. It is involved in renal metabolism of glutathione and its conjugates. It is a homodimeric disulphide-linked glycoprotein attached to the renal brush border microvilli membrane by a GPI-anchor. A glutamate residue has recently been shown [,] to be important for the catalytic activity of rDP. rDP seems to be evolutionary related to hypothetical proteins in the PQQ biosynthesis operons of Acinetobacter calcoaceticus and Klebsiella pneumoniae.; GO: 0008235 metalloexopeptidase activity, 0008239 dipeptidyl-peptidase activity, 0016805 dipeptidase activity, 0006508 proteolysis; PDB: 3NEH_B 2RAG_D 3LU2_A 3B40_A 3LY0_A 3FDG_B 2I5G_B 3S2J_A 3S2N_A 3S2L_A ....
Probab=66.14 E-value=75 Score=29.05 Aligned_cols=94 Identities=15% Similarity=0.133 Sum_probs=46.7
Q ss_pred ceeeccCCChhhHHHHHhcCCeEEECccchhhcc---CcccHHHHHH--------cCC-cEEEccCCCCCC---C---CC
Q 014702 278 LSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRML---GFAPIKEMLH--------ADI-CVSLGTDGAPSN---N---RM 339 (420)
Q Consensus 278 ~~~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~---~~~~~~~~~~--------~gv-~~~lgsD~~~~~---~---~~ 339 (420)
++.|--.+++++++.+++.|..+-++....+-.. ....+..+.+ .|+ .++||||..... . ..
T Consensus 207 l~~h~RNltDe~iraia~~GGviGi~~~~~fl~~~~~~~~~~~~~~~Hi~y~~~l~G~dhVgiGsDfdg~~~~~~gl~~~ 286 (320)
T PF01244_consen 207 LCPHPRNLTDEQIRAIAERGGVIGINFYPAFLGDDWDPRASLDDLVDHIDYIVDLVGIDHVGIGSDFDGIDGPPEGLEDP 286 (320)
T ss_dssp TS--TTSB-HHHHHHHHHTT-EEEEESSHHHHSTTHSSG-BHHHHHHHHHHHHHHH-GGGEEEE--BTTTSSHBBTBSSG
T ss_pred hCCCCCCCCHHHHHHHHHCCcEEEEEcchhhhcccccccccHHHHHHHHHHHHHhcCCCeEEECcccCCCCCCCCccCCH
Confidence 3455567889999999999876555544332111 2233443322 243 599999964221 1 11
Q ss_pred CHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHc
Q 014702 340 SIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSV 385 (420)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~~T~~~A~~l 385 (420)
.-+..+... +.. .|+|.+++-+.+-.|.-+++
T Consensus 287 ~~~~~l~~~-L~~-------------rG~s~~~i~kI~g~N~lRv~ 318 (320)
T PF01244_consen 287 SDLPNLTEE-LLK-------------RGYSEEDIEKILGGNFLRVL 318 (320)
T ss_dssp GGHHHHHHH-HHH-------------TTS-HHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHH-HHH-------------CCCCHHHHHHHHhHhHHHHh
Confidence 112222222 111 35899998888888877665
No 160
>PRK07945 hypothetical protein; Provisional
Probab=64.78 E-value=1.2e+02 Score=28.03 Aligned_cols=46 Identities=17% Similarity=0.091 Sum_probs=28.6
Q ss_pred hhHHHHHhcCCeEEECccchhhccCcccHHHHHHcCCcEEEccCCC
Q 014702 288 TEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHADICVSLGTDGA 333 (420)
Q Consensus 288 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~gv~~~lgsD~~ 333 (420)
+-++.++++|+.+.+............-++.+.+.|+++++|||.-
T Consensus 249 ~i~~a~~e~g~~lEINt~~~r~~P~~~il~~a~e~G~~vtigSDAH 294 (335)
T PRK07945 249 AVFAACREHGTAVEINSRPERRDPPTRLLRLALDAGCLFSIDTDAH 294 (335)
T ss_pred HHHHHHHHhCCEEEEeCCCCCCCChHHHHHHHHHcCCeEEecCCCC
Confidence 3457788889887766432211111123455678899999999953
No 161
>COG1831 Predicted metal-dependent hydrolase (urease superfamily) [General function prediction only]
Probab=60.01 E-value=1.2e+02 Score=26.64 Aligned_cols=136 Identities=13% Similarity=0.113 Sum_probs=76.8
Q ss_pred CHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCCChhhHHHHHhcCCeE
Q 014702 221 TDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKV 300 (420)
Q Consensus 221 ~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~ 300 (420)
+.+.+..++++|++.+++|++|........- . ....+....+.-.. -++-|......... ...|+.-
T Consensus 143 ~n~vl~~a~elA~dvdc~vqLHtes~~~~~~--~-------~i~~~ak~~G~~~~-~VVkHha~p~v~~~---~~~Gi~p 209 (285)
T COG1831 143 SNEVLEYAMELAKDVDCAVQLHTESLDEETY--E-------EIAEMAKEAGIKPY-RVVKHHAPPLVLKC---EEVGIFP 209 (285)
T ss_pred HHHHHHHHHHHhhcCCCcEEEecCCCChHHH--H-------HHHHHHHHhCCCcc-eeEeecCCccchhh---hhcCcCC
Confidence 4556788899999999999999976543210 0 02223444444222 33445443222111 1234332
Q ss_pred EECccchhhccCcccHHHHHHcCCcEEEccCCCCCC----CCCCHHHHHH-HHHHHhcccccccCCCCCCCCCCHHHHHH
Q 014702 301 SHCPASAMRMLGFAPIKEMLHADICVSLGTDGAPSN----NRMSIVDEMY-LASLINKGREVFANGTTDPAALPAETVLR 375 (420)
Q Consensus 301 ~~~p~~~~~~~~~~~~~~~~~~gv~~~lgsD~~~~~----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ls~~~al~ 375 (420)
++ |.+ ...+.+..+.|-.+.+=||+...+ .-+.++.--+ .....++ ..++.+.+.+
T Consensus 210 SV-~as------r~~v~~a~~~g~~FmmETDyIDDp~RpgavL~PktVPrr~~~i~~~------------g~~~ee~vy~ 270 (285)
T COG1831 210 SV-PAS------RKNVEDAAELGPRFMMETDYIDDPRRPGAVLGPKTVPRRTREILEK------------GDLTEEDVYR 270 (285)
T ss_pred cc-ccc------HHHHHHHHhcCCceEeecccccCcccCCCcCCccchhHHHHHHHHh------------cCCcHHHHHH
Confidence 11 111 124677788899999999986421 1222332221 2222332 2378899999
Q ss_pred HHhHHHHHHccCC
Q 014702 376 MATINGAKSVLWD 388 (420)
Q Consensus 376 ~~T~~~A~~lgl~ 388 (420)
..-.||.+++|++
T Consensus 271 i~~E~pe~VYg~~ 283 (285)
T COG1831 271 IHVENPERVYGIE 283 (285)
T ss_pred HHHhCHHHHhCcc
Confidence 9999999999975
No 162
>PRK06015 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=55.60 E-value=1.3e+02 Score=25.43 Aligned_cols=77 Identities=6% Similarity=-0.017 Sum_probs=50.3
Q ss_pred ccCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCCChhhHHHHHhcCC
Q 014702 219 NATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGV 298 (420)
Q Consensus 219 ~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~ 298 (420)
..+.+....+.+...+.|+++.--...+.. ..+.++.....-++.++.=+..++.++.+...+.|.
T Consensus 12 ~~~~~~a~~ia~al~~gGi~~iEit~~tp~--------------a~~~I~~l~~~~~~~~vGAGTVl~~e~a~~ai~aGA 77 (201)
T PRK06015 12 IDDVEHAVPLARALAAGGLPAIEITLRTPA--------------ALDAIRAVAAEVEEAIVGAGTILNAKQFEDAAKAGS 77 (201)
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEEeCCCcc--------------HHHHHHHHHHHCCCCEEeeEeCcCHHHHHHHHHcCC
Confidence 346777788888888888885433333322 222222221111235567778889999999999999
Q ss_pred eEEECccchhh
Q 014702 299 KVSHCPASAMR 309 (420)
Q Consensus 299 ~~~~~p~~~~~ 309 (420)
.+.+.|..+..
T Consensus 78 ~FivSP~~~~~ 88 (201)
T PRK06015 78 RFIVSPGTTQE 88 (201)
T ss_pred CEEECCCCCHH
Confidence 99999987643
No 163
>TIGR01182 eda Entner-Doudoroff aldolase. 2-deydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) is an enzyme of the Entner-Doudoroff pathway. This aldolase has another function, 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) shown experimentally in Escherichia coli and Pseudomonas putida
Probab=52.56 E-value=1.4e+02 Score=25.17 Aligned_cols=76 Identities=11% Similarity=-0.031 Sum_probs=50.1
Q ss_pred ccCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCCChhhHHHHHhcCC
Q 014702 219 NATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGV 298 (420)
Q Consensus 219 ~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~ 298 (420)
..+.+....+.+...+.|+++.--...+... .+.+......-++..+.=+..++.++.+...+.|.
T Consensus 16 ~~~~e~a~~~~~al~~~Gi~~iEit~~t~~a--------------~~~i~~l~~~~~~~~vGAGTVl~~~~a~~a~~aGA 81 (204)
T TIGR01182 16 IDDVDDALPLAKALIEGGLRVLEVTLRTPVA--------------LDAIRLLRKEVPDALIGAGTVLNPEQLRQAVDAGA 81 (204)
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEEeCCCccH--------------HHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHcCC
Confidence 3467777888888888898854333333222 22122221111235567778889999999999999
Q ss_pred eEEECccchh
Q 014702 299 KVSHCPASAM 308 (420)
Q Consensus 299 ~~~~~p~~~~ 308 (420)
.+.+.|..+.
T Consensus 82 ~FivsP~~~~ 91 (204)
T TIGR01182 82 QFIVSPGLTP 91 (204)
T ss_pred CEEECCCCCH
Confidence 9999998764
No 164
>COG1603 RPP1 RNase P/RNase MRP subunit p30 [Translation, ribosomal structure and biogenesis]
Probab=47.45 E-value=1.8e+02 Score=25.00 Aligned_cols=84 Identities=12% Similarity=0.116 Sum_probs=50.1
Q ss_pred hhHHHHHhcCCeEEECccchhhccC---------c-ccHHHHHHcCCcEEEccCCCCCCCCCCHHHHHHHHHHHhccccc
Q 014702 288 TEIGLLSRAGVKVSHCPASAMRMLG---------F-APIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREV 357 (420)
Q Consensus 288 ~~~~~~~~~~~~~~~~p~~~~~~~~---------~-~~~~~~~~~gv~~~lgsD~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (420)
..++.++++++.+.+.-....+..+ + ..++...+-++++.++||.... ..++.......+..-
T Consensus 117 ~~a~laa~~~valeisl~~ll~~~g~~Ra~~l~~lr~~lrl~rk~~v~ivvtS~A~s~---~elrsP~dv~sl~~~---- 189 (229)
T COG1603 117 VLARLAAEKGVALEISLRPLLRSSGYRRARLLSFLRSLLRLARKYDVPIVVTSDAESP---LELRSPRDVISLAKV---- 189 (229)
T ss_pred HHHHHHHhcCceEEEehHHhhccchhHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCh---hhhcChhhHHHHHHH----
Confidence 4467777787776654332222111 1 1222234559999999998643 233333333322221
Q ss_pred ccCCCCCCCCCCHHHHHHHHhHHHHHHcc
Q 014702 358 FANGTTDPAALPAETVLRMATINGAKSVL 386 (420)
Q Consensus 358 ~~~~~~~~~~ls~~~al~~~T~~~A~~lg 386 (420)
-|+...+|-++++.+|.+++.
T Consensus 190 --------lG~e~~ea~~~~~~~p~~iL~ 210 (229)
T COG1603 190 --------LGLEDDEAKKSLSEYPRLILR 210 (229)
T ss_pred --------hCCCHHHHHHHHHHhHHHHHH
Confidence 258999999999999999886
No 165
>cd01733 LSm10 The eukaryotic Sm and Sm-like (LSm) proteins associate with RNA to form the core domain of the ribonucleoprotein particles involved in a variety of RNA processing events including pre-mRNA splicing, telomere replication, and mRNA degradation. Members of this family share a highly conserved Sm fold containing an N-terminal helix followed by a strongly bent five-stranded antiparallel beta-sheet. LSm10 is an SmD1-like protein which is thought to bind U7 snRNA along with LSm11 and five other Sm subunits to form a 7-member ring structure. LSm10 and the U7 snRNP of which it is a part are thought to play an important role in histone mRNA 3' processing.
Probab=45.54 E-value=65 Score=22.30 Aligned_cols=35 Identities=11% Similarity=0.200 Sum_probs=24.4
Q ss_pred CceEEEEecEEEeecCCceeeeceeEEEECCEEEEEc
Q 014702 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIG 54 (420)
Q Consensus 18 ~~~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg 54 (420)
.+++.+.|+.++..+ +....-+.+.|++..|.+|.
T Consensus 42 ~MNl~L~~~~~~~~~--~~~~~~~~v~IRG~nI~yI~ 76 (78)
T cd01733 42 FMNIRLAKVTIIDRN--GKQVQVEEIMVTGRNIRYVH 76 (78)
T ss_pred CceeEEEEEEEEcCC--CceeECCcEEEECCEEEEEE
Confidence 457888888877433 33335578888888888763
No 166
>COG0800 Eda 2-keto-3-deoxy-6-phosphogluconate aldolase [Carbohydrate transport and metabolism]
Probab=45.15 E-value=1.9e+02 Score=24.51 Aligned_cols=76 Identities=11% Similarity=-0.059 Sum_probs=50.2
Q ss_pred cCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCCChhhHHHHHhcCCe
Q 014702 220 ATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVK 299 (420)
Q Consensus 220 ~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~ 299 (420)
.+.+....+.+..-+.|++..--...++. ..+.+..+...-++.++.-+..+++++++...+.|..
T Consensus 22 ~~~e~a~~~a~Ali~gGi~~IEITl~sp~--------------a~e~I~~l~~~~p~~lIGAGTVL~~~q~~~a~~aGa~ 87 (211)
T COG0800 22 DDVEEALPLAKALIEGGIPAIEITLRTPA--------------ALEAIRALAKEFPEALIGAGTVLNPEQARQAIAAGAQ 87 (211)
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEecCCCC--------------HHHHHHHHHHhCcccEEccccccCHHHHHHHHHcCCC
Confidence 45666666777777888875433333322 2222322222222566778889999999999999999
Q ss_pred EEECccchhh
Q 014702 300 VSHCPASAMR 309 (420)
Q Consensus 300 ~~~~p~~~~~ 309 (420)
+++.|..+..
T Consensus 88 fiVsP~~~~e 97 (211)
T COG0800 88 FIVSPGLNPE 97 (211)
T ss_pred EEECCCCCHH
Confidence 9999988743
No 167
>TIGR01496 DHPS dihydropteroate synthase. This model represents dihydropteroate synthase, the enzyme that catalyzes the second to last step in folic acid biosynthesis. The gene is usually designated folP (folic acid biosynthsis) or sul (sulfanilamide resistance). This model represents one branch of the family of pterin-binding enzymes (pfam00809) and of a cluster of dihydropteroate synthase and related enzymes (COG0294). Other members of pfam00809 and COG0294 are represented by TIGR00284.
Probab=44.58 E-value=2e+02 Score=25.33 Aligned_cols=94 Identities=6% Similarity=-0.052 Sum_probs=51.2
Q ss_pred HHHHHHHhcCCCCCceEEEEee--ccccccCHH-H---HHHHHHHHHHc-CCccceeccCCcchhHHHHhhcCCCCChHH
Q 014702 193 QKELYAKHHHAADGRIRIWFGI--RQIMNATDR-L---LLETRDMAREF-KTGIHMHVAEIPYENQVVMDTRKVDHGTVT 265 (420)
Q Consensus 193 ~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~-~---l~~~~~~a~~~-~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~ 265 (420)
..+..+++...|...+.+.... .+....+++ + +..+++..++. ++++.+|........+
T Consensus 25 ~~~~a~~~~~~GA~iIDIG~~st~p~~~~i~~~~E~~rl~~~v~~~~~~~~~plsiDT~~~~vi~~-------------- 90 (257)
T TIGR01496 25 AVAHAERMLEEGADIIDVGGESTRPGADRVSPEEELNRVVPVIKALRDQPDVPISVDTYRAEVARA-------------- 90 (257)
T ss_pred HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEeCCCHHHHHH--------------
Confidence 3444445555666677752111 111222333 3 55666766666 8999888865432221
Q ss_pred HHHHhccCCCccceeeccCC-ChhhHHHHHhcCCeEEECcc
Q 014702 266 FLDKIEFLQNNLLSAHTVWV-NHTEIGLLSRAGVKVSHCPA 305 (420)
Q Consensus 266 ~l~~~~~~~~~~~~~h~~~~-~~~~~~~~~~~~~~~~~~p~ 305 (420)
.++. +..++.|.... .++.++.++++++.++..+.
T Consensus 91 al~~-----G~~iINsis~~~~~~~~~l~~~~~~~vV~m~~ 126 (257)
T TIGR01496 91 ALEA-----GADIINDVSGGQDPAMLEVAAEYGVPLVLMHM 126 (257)
T ss_pred HHHc-----CCCEEEECCCCCCchhHHHHHHcCCcEEEEeC
Confidence 1211 23455666555 45567888888888776553
No 168
>cd01721 Sm_D3 The eukaryotic Sm and Sm-like (LSm) proteins associate with RNA to form core domain of the ribonucleoprotein particles involved in a variety of RNA processing events including pre-mRNA splicing, telomere replication, and mRNA degradation. Members of this family share a highly conserved Sm fold containing an N-terminal helix followed by a strongly bent five-stranded antiparallel beta-sheet. Sm subunit D3 heterodimerizes with subunit B and three such heterodimers form a hexameric ring structure with alternating B and D3 subunits. The D3 - B heterodimer also assembles into a heptameric ring containing D1, D2, E, F, and G subunits. Sm-like proteins exist in archaea as well as prokaryotes which form heptameric and hexameric ring structures similar to those found in eukaryotes.
Probab=42.65 E-value=82 Score=21.18 Aligned_cols=35 Identities=17% Similarity=0.248 Sum_probs=23.4
Q ss_pred CceEEEEecEEEeecCCceeeeceeEEEECCEEEEEc
Q 014702 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIG 54 (420)
Q Consensus 18 ~~~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg 54 (420)
-+.+.++|+.+...+ +....-+.+.|++..|.+|-
T Consensus 33 ~MNl~L~~~~~~~~~--g~~~~~~~v~IRG~nI~~v~ 67 (70)
T cd01721 33 NMNCQLKDVTVTARD--GRVSQLEQVYIRGSKIRFFI 67 (70)
T ss_pred CceeEEEEEEEECCC--CcEeEcCcEEEeCCEEEEEE
Confidence 357778888766434 33445578888888887763
No 169
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=40.65 E-value=2.3e+02 Score=26.43 Aligned_cols=119 Identities=9% Similarity=0.110 Sum_probs=70.8
Q ss_pred cccccCHHHHHHHHHHHHHcCCccceeccCCcchhHHH--Hhhc---CCCCChHHHHHHhccCCCccceeeccCCChhhH
Q 014702 216 QIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVV--MDTR---KVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEI 290 (420)
Q Consensus 216 ~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~--~~~~---~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~~ 290 (420)
++.+...+.+..+.+.+++.|+++..-..+........ .... +..-....++......+..+++.-+...+.+++
T Consensus 162 ~f~g~~~e~l~~L~~~~~~~Gl~~~t~v~d~~~~~~l~~~vd~lkI~s~~~~n~~LL~~~a~~gkPVilk~G~~~t~~e~ 241 (360)
T PRK12595 162 DFQGLGVEGLKILKQVADEYGLAVISEIVNPADVEVALDYVDVIQIGARNMQNFELLKAAGRVNKPVLLKRGLSATIEEF 241 (360)
T ss_pred cccCCCHHHHHHHHHHHHHcCCCEEEeeCCHHHHHHHHHhCCeEEECcccccCHHHHHHHHccCCcEEEeCCCCCCHHHH
Confidence 34455678889999999999999877665543222211 1111 122223557788888888888888887787775
Q ss_pred ----HHHHhcCC-eEEECccc-h------hhccCcccHHHHHH-cCCcEEEccCCCC
Q 014702 291 ----GLLSRAGV-KVSHCPAS-A------MRMLGFAPIKEMLH-ADICVSLGTDGAP 334 (420)
Q Consensus 291 ----~~~~~~~~-~~~~~p~~-~------~~~~~~~~~~~~~~-~gv~~~lgsD~~~ 334 (420)
+.+.+.|. .++.|... . .....+..+..+.+ -++++.+.+||..
T Consensus 242 ~~Ave~i~~~Gn~~i~L~erg~s~yp~~~~~~ldl~~i~~lk~~~~~PV~~d~~Hs~ 298 (360)
T PRK12595 242 IYAAEYIMSQGNGQIILCERGIRTYEKATRNTLDISAVPILKQETHLPVMVDVTHST 298 (360)
T ss_pred HHHHHHHHHCCCCCEEEECCccCCCCCCCCCCcCHHHHHHHHHHhCCCEEEeCCCCC
Confidence 44555554 34444311 0 11112223444444 5789999889874
No 170
>TIGR03221 muco_delta muconolactone delta-isomerase. Members of this protein family are muconolactone delta-isomerase (EC 5.3.3.4), the CatC protein of the ortho cleavage pathway for metabolizing aromatic compounds by way of catechol.
Probab=39.40 E-value=56 Score=23.29 Aligned_cols=44 Identities=25% Similarity=0.301 Sum_probs=33.6
Q ss_pred CCCCCHHHHHHHHhHHHHHHccCCCcccccc-----cCccccEEEEcCCC
Q 014702 365 PAALPAETVLRMATINGAKSVLWDNDIGSLE-----AGKKADMVVVDPFS 409 (420)
Q Consensus 365 ~~~ls~~~al~~~T~~~A~~lgl~~~~G~l~-----~G~~ADlvv~d~~~ 409 (420)
+.+++.+++-+.-..-.|++..+.. -|.+. +|.+|.+-|||.+.
T Consensus 11 P~~~~~~~~~~i~a~Eka~a~eLq~-~Gk~~~lWRv~G~~~n~sifdv~s 59 (90)
T TIGR03221 11 PVDMPAEKAAAIKAREKAYAQELQR-EGKWRHLWRVAGEYANYSIFDVES 59 (90)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHh-CCceEEEEEecCCceeEEEEEcCC
Confidence 3458888888888888888777653 35543 99999999999763
No 171
>PF10055 DUF2292: Uncharacterized small protein (DUF2292); InterPro: IPR018743 Members of this family of hypothetical bacterial proteins have no known function.
Probab=38.50 E-value=43 Score=19.51 Aligned_cols=15 Identities=13% Similarity=0.395 Sum_probs=13.0
Q ss_pred eEEEECCEEEEEcCC
Q 014702 42 GVFVVQDRIKAIGQS 56 (420)
Q Consensus 42 ~I~I~~G~I~~vg~~ 56 (420)
.|.|.||+|++|...
T Consensus 19 ~iiiqdG~vvQIe~~ 33 (38)
T PF10055_consen 19 TIIIQDGRVVQIEKT 33 (38)
T ss_pred EEEEECCEEEEEEhh
Confidence 688999999999774
No 172
>TIGR01856 hisJ_fam histidinol phosphate phosphatase HisJ family. This model represents the histidinol phosphate phosphatase HisJ of Bacillus subtilis, and related proteins from a number of species within a larger family of phosphatases in the PHP hydrolase family. HisJ catalyzes the penultimate step of histidine biosynthesis but shows no homology to the functionally equivalent sequence in E. coli, a domain of the bifunctional HisB protein. Note, however, that many species have two members and that Clostridium perfringens, predicted not to make histidine, has five members of this family; this family is designated subfamily rather than equivalog to indicate that members may not all act as HisJ.
Probab=37.26 E-value=2.8e+02 Score=24.20 Aligned_cols=43 Identities=16% Similarity=0.256 Sum_probs=26.3
Q ss_pred HHHHHhcCCeEEECccchhh-ccCccc----HHHHHHcCCcEEEccCC
Q 014702 290 IGLLSRAGVKVSHCPASAMR-MLGFAP----IKEMLHADICVSLGTDG 332 (420)
Q Consensus 290 ~~~~~~~~~~~~~~p~~~~~-~~~~~~----~~~~~~~gv~~~lgsD~ 332 (420)
++.+++.|+.+.+.-..... ....+| ++.+.+.|+++++|||.
T Consensus 191 l~~~~~~g~~lEiNt~g~r~~~~~~yP~~~il~~~~~~g~~itlgSDA 238 (253)
T TIGR01856 191 LKLVASQGKALEFNTSGLRKPLEEAYPSKELLNLAKELGIPLVLGSDA 238 (253)
T ss_pred HHHHHHcCCEEEEEcHhhcCCCCCCCCCHHHHHHHHHcCCCEEecCCC
Confidence 46677788877765432111 112222 34556779999999995
No 173
>TIGR01362 KDO8P_synth 3-deoxy-8-phosphooctulonate synthase. In Gram-negative bacteria, this is the first step in the biosynthesis of 3-deoxy-D-manno-octulosonate, part of the oligosaccharide core of lipopolysaccharide.
Probab=36.40 E-value=2e+02 Score=25.28 Aligned_cols=118 Identities=11% Similarity=0.071 Sum_probs=70.8
Q ss_pred cccccC-HHHHHHHHHHHHHcCCccceeccCCcchhHHH--HhhcCCCC---ChHHHHHHhccCCCccceeeccCCChhh
Q 014702 216 QIMNAT-DRLLLETRDMAREFKTGIHMHVAEIPYENQVV--MDTRKVDH---GTVTFLDKIEFLQNNLLSAHTVWVNHTE 289 (420)
Q Consensus 216 ~~~~~~-~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~--~~~~~~~~---~~~~~l~~~~~~~~~~~~~h~~~~~~~~ 289 (420)
.+.+.- .+-++.+.+..++.|+++...+.+........ .....++. ...+++.+.+..+..+.+-.+..+++++
T Consensus 52 sFqG~G~eeGL~iL~~vk~~~glpvvTeV~~~~~~~~vae~vDilQIgArn~rn~~LL~a~g~t~kpV~lKrG~~~t~~e 131 (258)
T TIGR01362 52 SFRGPGLEEGLKILQKVKEEFGVPILTDVHESSQCEPVAEVVDIIQIPAFLCRQTDLLVAAAKTGRIVNVKKGQFLSPWD 131 (258)
T ss_pred CCCCCCHHHHHHHHHHHHHHhCCceEEEeCCHHHHHHHHhhCcEEEeCchhcchHHHHHHHhccCCeEEecCCCcCCHHH
Confidence 334445 56788888888999999888776654322221 11122222 4466788888888888888999999988
Q ss_pred H----HHHHhcC-CeEEECccchhhc-----cCcccHHHHHHcCCcEEEccCCC
Q 014702 290 I----GLLSRAG-VKVSHCPASAMRM-----LGFAPIKEMLHADICVSLGTDGA 333 (420)
Q Consensus 290 ~----~~~~~~~-~~~~~~p~~~~~~-----~~~~~~~~~~~~gv~~~lgsD~~ 333 (420)
+ +++...| -.++.|.+..... ..+..+..+.+.+.++.+=--|.
T Consensus 132 ~l~aaeyi~~~Gn~~viLcERG~tf~y~r~~~D~~~ip~~k~~~~PVi~DpSHs 185 (258)
T TIGR01362 132 MKNVVEKVLSTGNKNILLCERGTSFGYNNLVVDMRSLPIMRELGCPVIFDATHS 185 (258)
T ss_pred HHHHHHHHHHcCCCcEEEEeCCCCcCCCCcccchhhhHHHHhcCCCEEEeCCcc
Confidence 5 4444444 3366665433111 11223444555588887744443
No 174
>COG1387 HIS2 Histidinol phosphatase and related hydrolases of the PHP family [Amino acid transport and metabolism / General function prediction only]
Probab=36.15 E-value=2.9e+02 Score=23.96 Aligned_cols=47 Identities=13% Similarity=0.090 Sum_probs=28.1
Q ss_pred hhHHHHHhcCCeEEECccchhhccCcccHHHHHHcCCcEEEccCCCC
Q 014702 288 TEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHADICVSLGTDGAP 334 (420)
Q Consensus 288 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~gv~~~lgsD~~~ 334 (420)
+.++.+.+.|+.+.+............-++...+.|+.++|+||.-.
T Consensus 151 ~~~~~~~~~g~aleins~~~~~~~~~~~~~~~~e~G~~~~i~tDaH~ 197 (237)
T COG1387 151 ELIELAEKNGKALEINSRPGRLDPNSEILRLARELGVKLAIGTDAHR 197 (237)
T ss_pred HHHHHHHHhCcEEeecCCcCccCchHHHHHHHHHhCCeEEeecCcCC
Confidence 34677777887776554411111112234455677999999999643
No 175
>PRK07114 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=36.15 E-value=2.8e+02 Score=23.81 Aligned_cols=80 Identities=8% Similarity=0.024 Sum_probs=50.8
Q ss_pred ccCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCCChhhHHHHHhcCC
Q 014702 219 NATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGV 298 (420)
Q Consensus 219 ~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~ 298 (420)
..+.+....+.+...+.|+++.--...+....+.... +...+..-.++.++.=+..++.++.+...+.|.
T Consensus 23 ~~~~~~a~~~~~al~~gGi~~iEiT~~tp~a~~~i~~----------l~~~~~~~~p~~~vGaGTVl~~e~a~~a~~aGA 92 (222)
T PRK07114 23 HADVEVAKKVIKACYDGGARVFEFTNRGDFAHEVFAE----------LVKYAAKELPGMILGVGSIVDAATAALYIQLGA 92 (222)
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEEeCCCCcHHHHHHH----------HHHHHHhhCCCeEEeeEeCcCHHHHHHHHHcCC
Confidence 3467788888888889998854333333222111111 011111112245667788889999999999999
Q ss_pred eEEECccchh
Q 014702 299 KVSHCPASAM 308 (420)
Q Consensus 299 ~~~~~p~~~~ 308 (420)
.+.+.|..+.
T Consensus 93 ~FiVsP~~~~ 102 (222)
T PRK07114 93 NFIVTPLFNP 102 (222)
T ss_pred CEEECCCCCH
Confidence 9999998764
No 176
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=35.52 E-value=95 Score=23.78 Aligned_cols=77 Identities=19% Similarity=0.158 Sum_probs=42.5
Q ss_pred cEEeCCCcEEeecccccccccchhhhcc-cCCCCChHHHhhhccccccCCCChHHHHHHHHHHHHHHHhCCcceeeeCCc
Q 014702 69 QIIDLQSQILLPGFVNTHVHTSQQLAKG-IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG 147 (420)
Q Consensus 69 ~~iD~~g~~v~PGfID~H~H~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvtt~~~~~~ 147 (420)
-.+|. .-.|.|=+||.|.|...-.... .+ +.-.....|-.....+..+...|||.+...-+
T Consensus 8 ~~fdl-dytiwP~~vdthl~~pfkP~k~~~g-----------------~~g~e~~fY~Di~rIL~dLk~~GVtl~~ASRt 69 (144)
T KOG4549|consen 8 MQFDL-DYTIWPRLVDTHLDYPFKPFKCECG-----------------SKGEEMIFYDDIRRILVDLKKLGVTLIHASRT 69 (144)
T ss_pred eEEec-cceeeeEEEEecccccccccccCcc-----------------cCcceeeeccchhHHHHHHHhcCcEEEEecCC
Confidence 34553 2469999999999985422211 00 00000111222334556677899999887666
Q ss_pred cCHHHHHHHHHHhCCe
Q 014702 148 QHVSEMAKAVELLGLR 163 (420)
Q Consensus 148 ~~~~~~~~~~~~~g~~ 163 (420)
.......+......+.
T Consensus 70 ~ap~iA~q~L~~fkvk 85 (144)
T KOG4549|consen 70 MAPQIASQGLETFKVK 85 (144)
T ss_pred CCHHHHHHHHHHhccC
Confidence 6666555555554443
No 177
>cd01724 Sm_D1 The eukaryotic Sm and Sm-like (LSm) proteins associate with RNA to form core domain of the ribonucleoprotein particles involved in a variety of RNA processing events including pre-mRNA splicing, telomere replication, and mRNA degradation. Members of this family share a highly conserved Sm fold containing an N-terminal helix followed by a strongly bent five-stranded antiparallel beta-sheet. Sm subunit D1 heterodimerizes with subunit D2 and three such heterodimers form a hexameric ring structure with alternating D1 and D2 subunits. The D1 - D2 heterodimer also assembles into a heptameric ring containing DB, D3, E, F, and G subunits. Sm-like proteins exist in archaea as well as prokaryotes which form heptameric and hexameric ring structures similar to those found in eukaryotes.
Probab=33.51 E-value=1.4e+02 Score=21.40 Aligned_cols=36 Identities=11% Similarity=0.003 Sum_probs=21.3
Q ss_pred CceEEEEecEEEeecCCceeeeceeEEEECCEEEEEcC
Q 014702 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQ 55 (420)
Q Consensus 18 ~~~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~ 55 (420)
-+.+.++|+.+...+ +....-+.+.|++..|.+|.=
T Consensus 34 ~MNl~L~~a~~~~~~--~~~~~~~~v~IRG~nI~yi~l 69 (90)
T cd01724 34 SMNTHLKNVKLTLKG--RNPVPLDTLSIRGNNIRYFIL 69 (90)
T ss_pred ceeEEEEEEEEEcCC--CceeEcceEEEeCCEEEEEEc
Confidence 346677777666322 334445677777777776653
No 178
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=32.75 E-value=3.4e+02 Score=23.80 Aligned_cols=115 Identities=12% Similarity=0.163 Sum_probs=60.6
Q ss_pred cCHHHHHHHHHHHHHcCCccceeccCCcchhHHHH--hh---cCCCCChHHHHHHhccCCCccceeeccCCChhhH----
Q 014702 220 ATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVM--DT---RKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEI---- 290 (420)
Q Consensus 220 ~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~--~~---~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~~---- 290 (420)
...+-++.+.+.+++.|+++..-..+......... .. -+..-...+++......+..+.+.-+...+.+++
T Consensus 63 ~G~~gl~~L~~~~~~~Gl~~~Tev~d~~~v~~~~e~vdilqIgs~~~~n~~LL~~va~tgkPVilk~G~~~t~~e~~~A~ 142 (250)
T PRK13397 63 LGLQGIRYLHEVCQEFGLLSVSEIMSERQLEEAYDYLDVIQVGARNMQNFEFLKTLSHIDKPILFKRGLMATIEEYLGAL 142 (250)
T ss_pred CCHHHHHHHHHHHHHcCCCEEEeeCCHHHHHHHHhcCCEEEECcccccCHHHHHHHHccCCeEEEeCCCCCCHHHHHHHH
Confidence 34456677777777777776655544322211111 11 1112223557777777788888888878888775
Q ss_pred HHHHhcCC-eEEECccch------hh-ccCcccHHHHHH-cCCcEEEccCCCC
Q 014702 291 GLLSRAGV-KVSHCPASA------MR-MLGFAPIKEMLH-ADICVSLGTDGAP 334 (420)
Q Consensus 291 ~~~~~~~~-~~~~~p~~~------~~-~~~~~~~~~~~~-~gv~~~lgsD~~~ 334 (420)
+.+.+.|. .+..|.+.. .+ ...+..+..+.+ -++++.++.-|..
T Consensus 143 e~i~~~Gn~~i~L~eRg~~~Y~~~~~n~~dl~ai~~lk~~~~lPVivd~SHs~ 195 (250)
T PRK13397 143 SYLQDTGKSNIILCERGVRGYDVETRNMLDIMAVPIIQQKTDLPIIVDVSHST 195 (250)
T ss_pred HHHHHcCCCeEEEEccccCCCCCccccccCHHHHHHHHHHhCCCeEECCCCCC
Confidence 45555554 355443111 01 111122344444 4778777544653
No 179
>cd01725 LSm2 The eukaryotic Sm and Sm-like (LSm) proteins associate with RNA to form the core domain of the ribonucleoprotein particles involved in a variety of RNA processing events including pre-mRNA splicing, telomere replication, and mRNA degradation. Members of this family share a highly conserved Sm fold containing an N-terminal helix followed by a strongly bent five-stranded antiparallel beta-sheet. LSm2 is one of at least seven subunits that assemble onto U6 snRNA to form a seven-membered ring structure. Sm-like proteins exist in archaea as well as prokaryotes that form heptameric and hexameric ring structures similar to those found in eukaryotes.
Probab=32.63 E-value=1.2e+02 Score=21.13 Aligned_cols=39 Identities=10% Similarity=0.157 Sum_probs=26.8
Q ss_pred CceEEEEecEEEeecCCceeeeceeEEEECCEEEEEcCC
Q 014702 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQS 56 (420)
Q Consensus 18 ~~~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~~ 56 (420)
.+++.++|+.+...++......-+.+.|++..|.+|.-.
T Consensus 34 ~MNi~L~n~~~~~~~~~~~~~~~~~v~IRG~~I~~I~lp 72 (81)
T cd01725 34 YLNIKLTNISVTDPEKYPHMLSVKNCFIRGSVVRYVQLP 72 (81)
T ss_pred CcccEEEEEEEEcCCCcccccccCeEEEECCEEEEEEeC
Confidence 457888998877543322223336899999999988754
No 180
>PF01081 Aldolase: KDPG and KHG aldolase; InterPro: IPR000887 4-Hydroxy-2-oxoglutarate aldolase (4.1.3.16 from EC) (KHG-aldolase) catalyzes the interconversion of 4-hydroxy-2-oxoglutarate into pyruvate and glyoxylate. Phospho-2-dehydro-3-deoxygluconate aldolase (4.1.2.14 from EC) (KDPG-aldolase) catalyzes the interconversion of 6-phospho-2-dehydro-3-deoxy-D-gluconate into pyruvate and glyceraldehyde 3-phosphate. These two enzymes are structurally and functionally related []. They are both homotrimeric proteins of approximately 220 amino-acid residues. They are class I aldolases whose catalytic mechanism involves the formation of a Schiff-base intermediate between the substrate and the epsilon-amino group of a lysine residue. In both enzymes, an arginine is required for catalytic activity.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 3VCR_A 1FQ0_A 1EUN_A 1EUA_B 1FWR_A 2C0A_B 1WBH_A 1WAU_A 2YW3_B 2YW4_A ....
Probab=32.10 E-value=1.6e+02 Score=24.74 Aligned_cols=90 Identities=10% Similarity=-0.028 Sum_probs=48.6
Q ss_pred cCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCCChhhHHHHHhcCCe
Q 014702 220 ATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVK 299 (420)
Q Consensus 220 ~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~ 299 (420)
.+.+....+.+...+.|+++.--...+.. ..+.+......-+..++.=+..++.++++...+.|..
T Consensus 17 ~~~~~a~~~~~al~~gGi~~iEiT~~t~~--------------a~~~I~~l~~~~p~~~vGAGTV~~~e~a~~a~~aGA~ 82 (196)
T PF01081_consen 17 DDPEDAVPIAEALIEGGIRAIEITLRTPN--------------ALEAIEALRKEFPDLLVGAGTVLTAEQAEAAIAAGAQ 82 (196)
T ss_dssp SSGGGHHHHHHHHHHTT--EEEEETTSTT--------------HHHHHHHHHHHHTTSEEEEES--SHHHHHHHHHHT-S
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEecCCcc--------------HHHHHHHHHHHCCCCeeEEEeccCHHHHHHHHHcCCC
Confidence 34556667777777888875433333322 2222221111112355677788899999999999999
Q ss_pred EEECccchhhccCcccHHHHHHcCCcEEE
Q 014702 300 VSHCPASAMRMLGFAPIKEMLHADICVSL 328 (420)
Q Consensus 300 ~~~~p~~~~~~~~~~~~~~~~~~gv~~~l 328 (420)
+.++|..+... ++...+.|+...=
T Consensus 83 FivSP~~~~~v-----~~~~~~~~i~~iP 106 (196)
T PF01081_consen 83 FIVSPGFDPEV-----IEYAREYGIPYIP 106 (196)
T ss_dssp EEEESS--HHH-----HHHHHHHTSEEEE
T ss_pred EEECCCCCHHH-----HHHHHHcCCcccC
Confidence 99999877443 3444555555443
No 181
>PRK06552 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=31.78 E-value=3.2e+02 Score=23.23 Aligned_cols=75 Identities=9% Similarity=0.043 Sum_probs=50.9
Q ss_pred cCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCChHHHHHHhc-cCC--CccceeeccCCChhhHHHHHhc
Q 014702 220 ATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIE-FLQ--NNLLSAHTVWVNHTEIGLLSRA 296 (420)
Q Consensus 220 ~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~--~~~~~~h~~~~~~~~~~~~~~~ 296 (420)
.+.+....+.+...+.|+++.--...+.. ..+.+..+. ... +..++.=+..++.++.+...+.
T Consensus 22 ~~~~~a~~~~~al~~~Gi~~iEit~~~~~--------------a~~~i~~l~~~~~~~p~~~vGaGTV~~~~~~~~a~~a 87 (213)
T PRK06552 22 ESKEEALKISLAVIKGGIKAIEVTYTNPF--------------ASEVIKELVELYKDDPEVLIGAGTVLDAVTARLAILA 87 (213)
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEECCCcc--------------HHHHHHHHHHHcCCCCCeEEeeeeCCCHHHHHHHHHc
Confidence 46778888888888999886543333322 222222221 111 2456777888899999999999
Q ss_pred CCeEEECccchh
Q 014702 297 GVKVSHCPASAM 308 (420)
Q Consensus 297 ~~~~~~~p~~~~ 308 (420)
|..+.+.|..+.
T Consensus 88 GA~FivsP~~~~ 99 (213)
T PRK06552 88 GAQFIVSPSFNR 99 (213)
T ss_pred CCCEEECCCCCH
Confidence 999999998763
No 182
>COG5016 Pyruvate/oxaloacetate carboxyltransferase [Energy production and conversion]
Probab=30.77 E-value=4.7e+02 Score=24.80 Aligned_cols=103 Identities=16% Similarity=0.084 Sum_probs=54.1
Q ss_pred HHHHHHHhCCcceeeeCCc----cCHHHHHHHHHHhCCeeEeeehhccCCCCCCcccccCChhHHHHHHHHHHHHhcCCC
Q 014702 129 LCGIELIHSGVTCFAEAGG----QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAA 204 (420)
Q Consensus 129 ~~~~~~~~~Gvtt~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (420)
+.......+|++.++.+.. .+.....++.++.|.+......+ +..+- .+...+ .++.+++...+
T Consensus 102 ~Fv~ka~~nGidvfRiFDAlND~RNl~~ai~a~kk~G~h~q~~i~Y-T~sPv-------Ht~e~y----v~~akel~~~g 169 (472)
T COG5016 102 KFVEKAAENGIDVFRIFDALNDVRNLKTAIKAAKKHGAHVQGTISY-TTSPV-------HTLEYY----VELAKELLEMG 169 (472)
T ss_pred HHHHHHHhcCCcEEEechhccchhHHHHHHHHHHhcCceeEEEEEe-ccCCc-------ccHHHH----HHHHHHHHHcC
Confidence 3567788999999887653 33455677788888866433222 21111 122333 33444444443
Q ss_pred CCceEE--EEeeccccccCHHHHHHHHH-HHHHcCCccceeccCCcc
Q 014702 205 DGRIRI--WFGIRQIMNATDRLLLETRD-MAREFKTGIHMHVAEIPY 248 (420)
Q Consensus 205 ~~~i~~--~~~~~~~~~~~~~~l~~~~~-~a~~~~~~v~~h~~~~~~ 248 (420)
...|-+ +.++ .+|....++++ +.+..++++++|+..+..
T Consensus 170 ~DSIciKDmaGl-----ltP~~ayelVk~iK~~~~~pv~lHtH~TsG 211 (472)
T COG5016 170 VDSICIKDMAGL-----LTPYEAYELVKAIKKELPVPVELHTHATSG 211 (472)
T ss_pred CCEEEeeccccc-----CChHHHHHHHHHHHHhcCCeeEEecccccc
Confidence 333222 2222 24444444444 345667888888776543
No 183
>PF02811 PHP: PHP domain; InterPro: IPR004013 The PHP (Polymerase and Histidinol Phosphatase) domain is a putative phosphoesterase domain. This family is often associated with an N-terminal region IPR003141 from INTERPRO.; GO: 0003824 catalytic activity; PDB: 2WJE_A 3QY8_A 2WJD_A 2WJF_A 1PB0_B 1M68_A 1M65_A 3E38_B 2W9M_A 3E0F_A ....
Probab=30.52 E-value=71 Score=25.67 Aligned_cols=39 Identities=10% Similarity=0.082 Sum_probs=26.6
Q ss_pred HHHHhCCcceee--eC-CccCHHHHHHHHHHhCCeeEeeehh
Q 014702 132 IELIHSGVTCFA--EA-GGQHVSEMAKAVELLGLRACLVQST 170 (420)
Q Consensus 132 ~~~~~~Gvtt~~--~~-~~~~~~~~~~~~~~~g~~~~~~~~~ 170 (420)
..+.+.|++.+. |. .........+.....+++.+.+..+
T Consensus 23 ~~A~~~Gl~~i~iTDH~~~~~~~~~~~~~~~~~i~vi~G~E~ 64 (175)
T PF02811_consen 23 EQAKEKGLDAIAITDHNNFAGYPDFYKEAKKKGIKVIPGVEI 64 (175)
T ss_dssp HHHHHTTESEEEEEEETTTTTHHHHHHHHHHTTSEEEEEEEE
T ss_pred HHHHHcCCCEEEEcCCcccccchHHHHHHHhcCCceEEeEee
Confidence 567789998765 33 2234556667777789998877655
No 184
>PRK05198 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional
Probab=29.83 E-value=3e+02 Score=24.28 Aligned_cols=117 Identities=11% Similarity=0.048 Sum_probs=70.3
Q ss_pred cccccC-HHHHHHHHHHHHHcCCccceeccCCcchhHHHH--h---hcCCCCChHHHHHHhccCCCccceeeccCCChhh
Q 014702 216 QIMNAT-DRLLLETRDMAREFKTGIHMHVAEIPYENQVVM--D---TRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTE 289 (420)
Q Consensus 216 ~~~~~~-~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~--~---~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~ 289 (420)
.+.+.. .+-++.+.+..++.|+++...+.+......... . .-+..-...+++.+.+..+..+.+-.+..+++++
T Consensus 60 sFqG~G~eeGL~~L~~vk~~~GlpvvTeV~~~~~~~~v~~~~DilQIgArn~rn~~LL~a~g~t~kpV~lKrG~~~t~~e 139 (264)
T PRK05198 60 SFRGPGLEEGLKILQEVKETFGVPVLTDVHEPEQAAPVAEVVDVLQIPAFLCRQTDLLVAAAKTGKVVNIKKGQFLAPWD 139 (264)
T ss_pred CCCCCChHHHHHHHHHHHHHHCCceEEEeCCHHHHHHHHhhCcEEEECchhcchHHHHHHHhccCCeEEecCCCcCCHHH
Confidence 334445 567888888889999998887766443222111 1 1122224456788888888888888999999988
Q ss_pred H----HHHHhcC-CeEEECccchhhc-----cCcccHHHHHHcCCcEEEccCC
Q 014702 290 I----GLLSRAG-VKVSHCPASAMRM-----LGFAPIKEMLHADICVSLGTDG 332 (420)
Q Consensus 290 ~----~~~~~~~-~~~~~~p~~~~~~-----~~~~~~~~~~~~gv~~~lgsD~ 332 (420)
+ +++...| -.++.|.+.-... ..+..+..+.+.+.++.+=--|
T Consensus 140 ~~~aaeyi~~~Gn~~vilcERG~tf~y~r~~~D~~~vp~~k~~~lPVi~DpSH 192 (264)
T PRK05198 140 MKNVVDKVREAGNDKIILCERGTSFGYNNLVVDMRGLPIMRETGAPVIFDATH 192 (264)
T ss_pred HHHHHHHHHHcCCCeEEEEeCCCCcCCCCeeechhhhHHHhhCCCCEEEeCCc
Confidence 6 4444444 4466665433111 1223344555667777764434
No 185
>cd01723 LSm4 The eukaryotic Sm and Sm-like (LSm) proteins associate with RNA to form the core domain of the ribonucleoprotein particles involved in a variety of RNA processing events including pre-mRNA splicing, telomere replication, and mRNA degradation. Members of this family share a highly conserved Sm fold containing an N-terminal helix followed by a strongly bent five-stranded antiparallel beta-sheet. LSm4 is one of at least seven subunits that assemble onto U6 snRNA to form a seven-membered ring structure. Sm-like proteins exist in archaea as well as prokaryotes that form heptameric and hexameric ring structures similar to those found in eukaryotes.
Probab=29.55 E-value=1.4e+02 Score=20.43 Aligned_cols=37 Identities=11% Similarity=0.246 Sum_probs=25.9
Q ss_pred CceEEEEecEEEeecCCceeeeceeEEEECCEEEEEcC
Q 014702 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQ 55 (420)
Q Consensus 18 ~~~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~ 55 (420)
-+.+.+.|+...+.++. .....+.+.|++..|..|.-
T Consensus 34 ~mNi~L~~~~~~~~~g~-~~~~~~~v~IRG~~I~~i~~ 70 (76)
T cd01723 34 WMNIHLREVICTSKDGD-KFWKMPECYIRGNTIKYLRV 70 (76)
T ss_pred CCceEEEeEEEECCCCc-EeeeCCcEEEeCCEEEEEEc
Confidence 46788899888754432 22233589999999999864
No 186
>PF11068 YlqD: YlqD protein; InterPro: IPR021297 This bacterial family of proteins has no known function. ; PDB: 4DCI_C.
Probab=28.03 E-value=63 Score=25.02 Aligned_cols=14 Identities=14% Similarity=0.238 Sum_probs=12.6
Q ss_pred ceeEEEECCEEEEE
Q 014702 40 NGGVFVVQDRIKAI 53 (420)
Q Consensus 40 ~~~I~I~~G~I~~v 53 (420)
+..|+|+||+|.+|
T Consensus 117 ~~EIvvkDG~V~eI 130 (131)
T PF11068_consen 117 GVEIVVKDGKVIEI 130 (131)
T ss_dssp TEEEEEETTEEEEE
T ss_pred CcEEEEECCEEEEe
Confidence 57899999999987
No 187
>cd01731 archaeal_Sm1 The archaeal sm1 proteins: The Sm proteins are conserved in all three domains of life and are always associated with U-rich RNA sequences. They function to mediate RNA-RNA interactions and RNA biogenesis. All Sm proteins contain a common sequence motif in two segments, Sm1 and Sm2, separated by a short variable linker. Eukaryotic Sm proteins form part of specific small nuclear ribonucleoproteins (snRNPs) that are involved in the processing of pre-mRNAs to mature mRNAs, and are a major component of the eukaryotic spliceosome. Most snRNPs consist of seven Sm proteins (B/B', D1, D2, D3, E, F and G) arranged in a ring on a uridine-rich sequence (Sm site), plus a small nuclear RNA (snRNA) (either U1, U2, U5 or U4/6). Since archaebacteria do not have any splicing apparatus, Sm proteins of archaebacteria may play a more general role. Archaeal Lsm proteins are likely to represent the ancestral Sm domain.
Probab=26.76 E-value=2e+02 Score=19.10 Aligned_cols=36 Identities=19% Similarity=0.254 Sum_probs=21.4
Q ss_pred CceEEEEecEEEeecCCceeeeceeEEEECCEEEEEcC
Q 014702 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQ 55 (420)
Q Consensus 18 ~~~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg~ 55 (420)
-+.+++.|+.-...+ +....-+.+.|++..|..|.+
T Consensus 33 ~mNlvL~~~~e~~~~--~~~~~lg~~~iRG~~I~~i~~ 68 (68)
T cd01731 33 HMNLVLEDAEEIDDG--EPVRKYGRVVIRGDNVLFISP 68 (68)
T ss_pred cceEEEeeEEEEecC--CeEeEcCcEEEeCCEEEEEcC
Confidence 456777776554322 233345677788877777753
No 188
>PRK09140 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Reviewed
Probab=25.99 E-value=4e+02 Score=22.47 Aligned_cols=76 Identities=13% Similarity=0.020 Sum_probs=48.4
Q ss_pred ccCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCChHHHHHHhc-cCCCccceeeccCCChhhHHHHHhcC
Q 014702 219 NATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIE-FLQNNLLSAHTVWVNHTEIGLLSRAG 297 (420)
Q Consensus 219 ~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~h~~~~~~~~~~~~~~~~ 297 (420)
..+.+...++.+.+.+.|+++.=-...+....+ .+..+. ....+.++.=+..++.++++...+.|
T Consensus 18 ~~~~~~~~~~~~a~~~gGi~~iEvt~~~~~~~~--------------~i~~l~~~~~~~~~iGaGTV~~~~~~~~a~~aG 83 (206)
T PRK09140 18 GITPDEALAHVGALIEAGFRAIEIPLNSPDPFD--------------SIAALVKALGDRALIGAGTVLSPEQVDRLADAG 83 (206)
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEeCCCccHHH--------------HHHHHHHHcCCCcEEeEEecCCHHHHHHHHHcC
Confidence 346778888888888989885433333322211 121111 11223455666778899999999999
Q ss_pred CeEEECccchh
Q 014702 298 VKVSHCPASAM 308 (420)
Q Consensus 298 ~~~~~~p~~~~ 308 (420)
....+.|..+.
T Consensus 84 A~fivsp~~~~ 94 (206)
T PRK09140 84 GRLIVTPNTDP 94 (206)
T ss_pred CCEEECCCCCH
Confidence 99999998763
No 189
>smart00651 Sm snRNP Sm proteins. small nuclear ribonucleoprotein particles (snRNPs) involved in pre-mRNA splicing
Probab=21.84 E-value=2.2e+02 Score=18.60 Aligned_cols=36 Identities=19% Similarity=0.178 Sum_probs=21.6
Q ss_pred CceEEEEecEEEeecCCceeeeceeEEEECCEEEEEc
Q 014702 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIG 54 (420)
Q Consensus 18 ~~~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~vg 54 (420)
-+.++++++.....++ ......+.+.|++..|..|.
T Consensus 31 ~~NlvL~~~~e~~~~~-~~~~~~~~~~IrG~~I~~i~ 66 (67)
T smart00651 31 FMNLVLEDVEETVKDG-EKKRKLGLVFIRGNNIVYII 66 (67)
T ss_pred cccEEEccEEEEecCC-cEEeEeCCEEEcCCEEEEEe
Confidence 3566777776664331 23445567777777777664
No 190
>PF13128 DUF3954: Protein of unknown function (DUF3954)
Probab=21.84 E-value=2.1e+02 Score=17.82 Aligned_cols=12 Identities=17% Similarity=0.224 Sum_probs=5.7
Q ss_pred EEECCEEEEEcC
Q 014702 44 FVVQDRIKAIGQ 55 (420)
Q Consensus 44 ~I~~G~I~~vg~ 55 (420)
.|+||+|..+.+
T Consensus 14 iV~~G~v~~i~p 25 (50)
T PF13128_consen 14 IVKDGEVTFIEP 25 (50)
T ss_pred EEECCeEEEcCC
Confidence 335555555533
No 191
>PRK08392 hypothetical protein; Provisional
Probab=21.64 E-value=2.7e+02 Score=23.55 Aligned_cols=42 Identities=17% Similarity=0.249 Sum_probs=26.2
Q ss_pred HHHHHhcCCeEEECccchhhccCcccHHHHHHcCCcEEEccCCC
Q 014702 290 IGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHADICVSLGTDGA 333 (420)
Q Consensus 290 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~gv~~~lgsD~~ 333 (420)
++.++++|+.+.+.-.. ......-++.+.+.|+++++|||.-
T Consensus 143 ~~~~~~~g~~lEiNt~~--~~p~~~~l~~~~~~G~~~~igSDAH 184 (215)
T PRK08392 143 LDLAEAYGKAFEISSRY--RVPDLEFIRECIKRGIKLTFASDAH 184 (215)
T ss_pred HHHHHHhCCEEEEeCCC--CCCCHHHHHHHHHcCCEEEEeCCCC
Confidence 56677788777665311 1111122456678899999999953
No 192
>PRK05718 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=20.93 E-value=5.3e+02 Score=21.96 Aligned_cols=76 Identities=9% Similarity=-0.057 Sum_probs=47.8
Q ss_pred ccCHHHHHHHHHHHHHcCCccceeccCCcchhHHHHhhcCCCCChHHHHHHhccCCCccceeeccCCChhhHHHHHhcCC
Q 014702 219 NATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGV 298 (420)
Q Consensus 219 ~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~ 298 (420)
..+.+....+.+...+.|+++.=-...+.. ..+.+..+...-++..+.=+..+++++.+...+.|.
T Consensus 23 ~~~~~~a~~i~~al~~~Gi~~iEitl~~~~--------------~~~~I~~l~~~~p~~~IGAGTVl~~~~a~~a~~aGA 88 (212)
T PRK05718 23 INKLEDAVPLAKALVAGGLPVLEVTLRTPA--------------ALEAIRLIAKEVPEALIGAGTVLNPEQLAQAIEAGA 88 (212)
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEEecCCcc--------------HHHHHHHHHHHCCCCEEEEeeccCHHHHHHHHHcCC
Confidence 356677777888888888874322222221 222222221111235566677788999999999999
Q ss_pred eEEECccchh
Q 014702 299 KVSHCPASAM 308 (420)
Q Consensus 299 ~~~~~p~~~~ 308 (420)
.+.+.|..+.
T Consensus 89 ~FivsP~~~~ 98 (212)
T PRK05718 89 QFIVSPGLTP 98 (212)
T ss_pred CEEECCCCCH
Confidence 9999998763
No 193
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=20.77 E-value=7.1e+02 Score=26.32 Aligned_cols=38 Identities=11% Similarity=0.184 Sum_probs=27.4
Q ss_pred EeeccccccCHHHHHHHHHHHHHcCCccceeccCCcch
Q 014702 212 FGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYE 249 (420)
Q Consensus 212 ~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~h~~~~~~~ 249 (420)
++.-+............++.+++.|++|++-...+...
T Consensus 576 vGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~T 613 (972)
T KOG0202|consen 576 VGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKET 613 (972)
T ss_pred EEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHH
Confidence 44445555556678889999999999988777665543
No 194
>PRK14042 pyruvate carboxylase subunit B; Provisional
Probab=20.22 E-value=9.1e+02 Score=24.46 Aligned_cols=104 Identities=16% Similarity=0.045 Sum_probs=54.8
Q ss_pred HHHHHHhCCcceeeeCCcc----CHHHHHHHHHHhCCeeEeeehhccCCCCCCcccccCChhHHHHHHHHHHHHhcCCCC
Q 014702 130 CGIELIHSGVTCFAEAGGQ----HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAAD 205 (420)
Q Consensus 130 ~~~~~~~~Gvtt~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (420)
..+.+..+|+..++.+... ......+.+++.|........++ ..+ ..+...+ .++.+++...+.
T Consensus 101 ~v~~a~~~Gidv~Rifd~lnd~~n~~~~i~~~k~~G~~~~~~i~yt-~sp-------~~t~e~~----~~~ak~l~~~Ga 168 (596)
T PRK14042 101 FVKLAVNNGVDVFRVFDALNDARNLKVAIDAIKSHKKHAQGAICYT-TSP-------VHTLDNF----LELGKKLAEMGC 168 (596)
T ss_pred HHHHHHHcCCCEEEEcccCcchHHHHHHHHHHHHcCCEEEEEEEec-CCC-------CCCHHHH----HHHHHHHHHcCC
Confidence 5567889999998876533 23445677788887654332222 111 1122222 233333333443
Q ss_pred CceEEEEeeccccccCHHHHHHHHHHHH-HcCCccceeccCCcc
Q 014702 206 GRIRIWFGIRQIMNATDRLLLETRDMAR-EFKTGIHMHVAEIPY 248 (420)
Q Consensus 206 ~~i~~~~~~~~~~~~~~~~l~~~~~~a~-~~~~~v~~h~~~~~~ 248 (420)
..+.+ ... .-..+|....++++..+ +.++++++|+..+..
T Consensus 169 d~I~I-kDt--aG~l~P~~v~~lv~alk~~~~ipi~~H~Hnt~G 209 (596)
T PRK14042 169 DSIAI-KDM--AGLLTPTVTVELYAGLKQATGLPVHLHSHSTSG 209 (596)
T ss_pred CEEEe-CCc--ccCCCHHHHHHHHHHHHhhcCCEEEEEeCCCCC
Confidence 33322 111 12245666666665554 447888888877553
No 195
>cd01726 LSm6 The eukaryotic Sm and Sm-like (LSm) proteins associate with RNA to form the core domain of the ribonucleoprotein particles involved in a variety of RNA processing events including pre-mRNA splicing, telomere replication, and mRNA degradation. Members of this family share a highly conserved Sm fold containing an N-terminal helix followed by a strongly bent five-stranded antiparallel beta-sheet. LSm6 is one of at least seven subunits that assemble onto U6 snRNA to form a seven-membered ring structure. Sm-like proteins exist in archaea as well as prokaryotes that form heptameric and hexameric ring structures similar to those found in eukaryotes.
Probab=20.21 E-value=2.7e+02 Score=18.37 Aligned_cols=34 Identities=12% Similarity=0.136 Sum_probs=20.0
Q ss_pred CceEEEEecEEEeecCCceeeeceeEEEECCEEEEE
Q 014702 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAI 53 (420)
Q Consensus 18 ~~~~li~n~~v~~~d~~~~~~~~~~I~I~~G~I~~v 53 (420)
-+.+++.++.... ++ +....-+.+.|++..|..|
T Consensus 33 ~mNlvL~~~~~~~-~~-~~~~~~~~v~IRG~~I~~I 66 (67)
T cd01726 33 YMNIALEQTEEYV-NG-QLKNKYGDAFIRGNNVLYI 66 (67)
T ss_pred ceeeEEeeEEEEe-CC-ceeeEeCCEEEECCEEEEE
Confidence 4567777775543 22 2233445777777777766
Done!