Query 014710
Match_columns 420
No_of_seqs 204 out of 2825
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 16:26:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014710.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014710hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3n71_A Histone lysine methyltr 100.0 2.2E-71 7.4E-76 556.6 36.0 400 3-414 25-451 (490)
2 3qww_A SET and MYND domain-con 100.0 3.6E-71 1.2E-75 546.9 34.7 393 3-406 25-432 (433)
3 3qwp_A SET and MYND domain-con 100.0 6.7E-70 2.3E-74 538.9 34.1 388 3-412 23-427 (429)
4 3n71_A Histone lysine methyltr 99.5 5E-13 1.7E-17 133.7 14.9 112 273-384 352-463 (490)
5 2odd_A Protein CBFA2T1; MYND z 99.4 6.1E-14 2.1E-18 99.2 2.3 59 3-71 2-60 (64)
6 3rq4_A Histone-lysine N-methyl 99.4 7.8E-14 2.7E-18 125.1 0.4 79 161-240 155-235 (247)
7 3edt_B KLC 2, kinesin light ch 99.3 6.6E-11 2.3E-15 108.0 18.9 139 273-411 44-182 (283)
8 3s8p_A Histone-lysine N-methyl 99.3 5E-13 1.7E-17 121.0 0.4 81 159-239 182-263 (273)
9 3edt_B KLC 2, kinesin light ch 99.2 1.2E-10 4.2E-15 106.2 15.2 128 282-409 11-138 (283)
10 3qww_A SET and MYND domain-con 99.2 5.1E-11 1.8E-15 117.3 10.6 84 326-409 310-393 (433)
11 3nf1_A KLC 1, kinesin light ch 99.2 1.2E-09 4.1E-14 101.3 18.5 136 276-411 73-208 (311)
12 3nf1_A KLC 1, kinesin light ch 99.2 1.4E-09 4.8E-14 100.8 18.8 135 275-409 30-164 (311)
13 3qwp_A SET and MYND domain-con 99.2 2.1E-10 7.2E-15 113.0 12.8 97 274-370 331-427 (429)
14 1n3j_A A612L, histone H3 lysin 99.1 2E-11 6.8E-16 98.1 2.1 47 175-221 57-105 (119)
15 2w5y_A Histone-lysine N-methyl 99.0 2.6E-10 9E-15 98.9 4.4 61 182-242 124-191 (192)
16 4gcn_A Protein STI-1; structur 98.9 2.8E-08 9.6E-13 80.4 15.0 101 276-385 12-112 (127)
17 2xev_A YBGF; tetratricopeptide 98.9 3E-08 1E-12 79.5 14.4 121 276-411 6-126 (129)
18 2dj8_A Protein CBFA2T1; zinc f 98.9 8.3E-10 2.8E-14 76.6 3.3 45 26-71 14-58 (60)
19 4gco_A Protein STI-1; structur 98.9 6.3E-08 2.2E-12 78.2 15.0 105 274-399 15-119 (126)
20 3rkv_A Putative peptidylprolyl 98.9 5.2E-08 1.8E-12 81.9 14.8 108 270-385 9-126 (162)
21 2jw6_A Deformed epidermal auto 98.8 1.2E-09 4.2E-14 73.5 2.3 46 23-69 5-50 (52)
22 3ooi_A Histone-lysine N-methyl 98.8 1.1E-09 3.9E-14 98.1 2.8 61 182-242 165-231 (232)
23 3upv_A Heat shock protein STI1 98.8 2.2E-07 7.4E-12 74.3 15.7 121 272-410 4-124 (126)
24 3gyz_A Chaperone protein IPGC; 98.8 1.3E-07 4.3E-12 79.1 13.8 112 272-404 36-147 (151)
25 2hr2_A Hypothetical protein; a 98.8 1.8E-07 6.1E-12 78.3 14.1 136 271-408 10-153 (159)
26 3ope_A Probable histone-lysine 98.7 3.1E-09 1.1E-13 94.7 3.2 63 182-244 146-215 (222)
27 2d8q_A BLU protein, zinc finge 98.7 8.1E-09 2.8E-13 73.6 4.5 45 27-72 15-59 (70)
28 3ro3_A PINS homolog, G-protein 98.7 4.8E-07 1.6E-11 74.5 16.2 130 274-409 11-140 (164)
29 2od1_A Protein CBFA2T1; zinc f 98.7 4.4E-09 1.5E-13 72.9 2.7 45 26-71 12-56 (60)
30 2xcb_A PCRH, regulatory protei 98.7 4E-07 1.4E-11 74.7 15.1 120 273-413 19-138 (142)
31 3h6l_A Histone-lysine N-methyl 98.7 3.6E-09 1.2E-13 97.1 2.7 62 183-244 191-258 (278)
32 2vgx_A Chaperone SYCD; alterna 98.7 5.4E-07 1.9E-11 74.8 15.4 120 272-412 21-140 (148)
33 3ulq_A Response regulator aspa 98.7 3.5E-07 1.2E-11 88.1 15.8 127 278-409 109-235 (383)
34 3sz7_A HSC70 cochaperone (SGT) 98.7 1E-06 3.6E-11 73.9 16.5 99 272-386 11-109 (164)
35 3ulq_A Response regulator aspa 98.6 8.5E-07 2.9E-11 85.4 17.5 130 274-408 145-274 (383)
36 3f9x_A Histone-lysine N-methyl 98.6 9.4E-09 3.2E-13 87.6 2.7 40 182-221 107-150 (166)
37 3gw4_A Uncharacterized protein 98.6 1.8E-06 6.2E-11 74.4 17.0 130 273-407 27-156 (203)
38 2fbn_A 70 kDa peptidylprolyl i 98.6 2.1E-06 7.3E-11 74.4 17.4 117 270-401 36-162 (198)
39 1elr_A TPR2A-domain of HOP; HO 98.6 3.5E-06 1.2E-10 66.6 16.9 103 274-385 6-108 (131)
40 3u3w_A Transcriptional activat 98.6 1.7E-06 5.8E-11 80.2 17.2 129 279-412 122-250 (293)
41 3q49_B STIP1 homology and U bo 98.6 2.9E-06 1E-10 68.3 16.6 113 274-402 11-123 (137)
42 2dba_A Smooth muscle cell asso 98.6 1.2E-06 3.9E-11 71.5 14.3 111 275-403 31-141 (148)
43 3ro3_A PINS homolog, G-protein 98.6 1.4E-06 4.7E-11 71.6 14.4 111 274-388 51-161 (164)
44 3bo5_A Histone-lysine N-methyl 98.6 2.1E-08 7E-13 92.8 3.1 62 182-243 205-286 (290)
45 1ml9_A Histone H3 methyltransf 98.6 1.9E-08 6.4E-13 93.9 2.7 61 182-242 220-301 (302)
46 2qfc_A PLCR protein; TPR, HTH, 98.6 2E-06 6.8E-11 79.7 16.6 111 275-389 158-270 (293)
47 3u3w_A Transcriptional activat 98.6 1.2E-06 3.9E-11 81.3 15.0 112 275-389 158-270 (293)
48 3qky_A Outer membrane assembly 98.6 1.1E-06 3.8E-11 79.7 14.5 114 273-401 16-137 (261)
49 3hna_A Histone-lysine N-methyl 98.6 6.8E-08 2.3E-12 89.1 6.3 57 183-239 217-285 (287)
50 2r3a_A Histone-lysine N-methyl 98.5 4.8E-08 1.6E-12 90.7 4.7 41 182-222 215-263 (300)
51 3q15_A PSP28, response regulat 98.5 2.8E-06 9.6E-11 81.6 17.3 130 274-409 143-272 (378)
52 1ihg_A Cyclophilin 40; ppiase 98.5 2.4E-06 8.2E-11 82.3 16.1 124 265-401 216-347 (370)
53 2qfc_A PLCR protein; TPR, HTH, 98.5 2.7E-06 9.3E-11 78.8 15.9 128 279-411 122-249 (293)
54 3qky_A Outer membrane assembly 98.5 1.4E-06 4.9E-11 79.0 13.8 118 285-417 110-251 (261)
55 1mvh_A Cryptic LOCI regulator 98.5 2.6E-08 9E-13 92.5 1.9 40 182-221 213-260 (299)
56 1elw_A TPR1-domain of HOP; HOP 98.5 4E-06 1.4E-10 64.9 14.4 107 273-400 5-111 (118)
57 4g1t_A Interferon-induced prot 98.5 1.5E-06 5.1E-11 85.7 14.4 118 278-400 57-177 (472)
58 3q15_A PSP28, response regulat 98.5 3.3E-06 1.1E-10 81.1 16.5 110 275-389 185-294 (378)
59 4a1s_A PINS, partner of inscut 98.5 4.5E-06 1.5E-10 80.6 17.4 130 271-409 47-177 (411)
60 2f69_A Histone-lysine N-methyl 98.5 3.9E-08 1.3E-12 89.4 2.4 41 182-222 186-231 (261)
61 3gw4_A Uncharacterized protein 98.5 4.3E-06 1.5E-10 72.1 15.3 113 274-389 68-180 (203)
62 4ga2_A E3 SUMO-protein ligase 98.5 1.9E-06 6.6E-11 71.5 12.5 109 276-405 35-144 (150)
63 1qqe_A Vesicular transport pro 98.5 5.6E-06 1.9E-10 76.7 16.8 123 280-408 45-168 (292)
64 3k9i_A BH0479 protein; putativ 98.4 1.1E-06 3.7E-11 69.5 9.8 99 285-401 3-101 (117)
65 4gyw_A UDP-N-acetylglucosamine 98.4 2.1E-06 7.1E-11 89.9 14.5 93 277-385 48-140 (723)
66 3urz_A Uncharacterized protein 98.4 9.8E-06 3.3E-10 71.0 16.3 107 272-399 4-126 (208)
67 1a17_A Serine/threonine protei 98.4 1.5E-05 5.1E-10 66.0 16.7 106 271-397 12-117 (166)
68 3ro2_A PINS homolog, G-protein 98.4 1.1E-05 3.6E-10 74.7 17.3 126 274-408 7-133 (338)
69 1hxi_A PEX5, peroxisome target 98.4 1.9E-06 6.4E-11 68.8 10.3 94 276-385 21-114 (121)
70 2qpw_A PR domain zinc finger p 98.4 1.4E-07 4.7E-12 78.2 3.5 39 183-221 100-141 (149)
71 1h3i_A Histone H3 lysine 4 spe 98.4 6.3E-08 2.2E-12 90.3 1.7 39 183-221 241-284 (293)
72 2lni_A Stress-induced-phosphop 98.4 5.9E-06 2E-10 65.7 13.3 94 276-385 20-113 (133)
73 2vyi_A SGTA protein; chaperone 98.4 1.4E-05 4.9E-10 62.9 15.5 98 272-385 12-109 (131)
74 3smt_A Histone-lysine N-methyl 98.4 2.1E-07 7.1E-12 92.8 5.4 89 147-235 237-330 (497)
75 2yhc_A BAMD, UPF0169 lipoprote 98.4 4.9E-06 1.7E-10 73.9 13.7 119 274-407 6-142 (225)
76 4g1t_A Interferon-induced prot 98.4 2E-06 6.8E-11 84.8 12.1 96 310-405 47-143 (472)
77 4a1s_A PINS, partner of inscut 98.4 8.8E-06 3E-10 78.5 16.3 130 274-409 225-354 (411)
78 3sf4_A G-protein-signaling mod 98.4 1.2E-05 4.1E-10 77.0 17.1 133 274-412 229-361 (406)
79 1hz4_A MALT regulatory protein 98.4 1.3E-05 4.5E-10 76.4 17.0 110 277-388 58-167 (373)
80 3sf4_A G-protein-signaling mod 98.3 1.3E-05 4.5E-10 76.6 17.0 124 275-407 12-136 (406)
81 4gyw_A UDP-N-acetylglucosamine 98.3 4.1E-06 1.4E-10 87.7 13.6 97 273-385 10-106 (723)
82 1p5q_A FKBP52, FK506-binding p 98.3 1.6E-05 5.5E-10 75.4 16.7 114 271-397 146-266 (336)
83 2ifu_A Gamma-SNAP; membrane fu 98.3 7.3E-06 2.5E-10 76.5 14.0 121 281-408 45-165 (307)
84 2ifu_A Gamma-SNAP; membrane fu 98.3 1.1E-05 3.9E-10 75.2 15.2 108 277-389 81-188 (307)
85 3qxy_A N-lysine methyltransfer 98.3 7.7E-07 2.6E-11 87.8 7.4 86 148-233 184-277 (449)
86 1wao_1 Serine/threonine protei 98.3 3E-06 1E-10 84.5 11.7 105 276-401 10-114 (477)
87 1na0_A Designed protein CTPR3; 98.3 3E-05 1E-09 60.4 15.3 102 276-398 13-114 (125)
88 4eqf_A PEX5-related protein; a 98.3 7.9E-06 2.7E-10 77.6 13.5 115 277-407 218-336 (365)
89 3ro2_A PINS homolog, G-protein 98.2 2.1E-05 7.1E-10 72.7 15.4 128 275-408 46-193 (338)
90 4gcn_A Protein STI-1; structur 98.2 1E-05 3.6E-10 64.9 11.1 89 312-409 6-94 (127)
91 2c2l_A CHIP, carboxy terminus 98.2 3.1E-05 1.1E-09 71.3 15.7 98 274-387 6-103 (281)
92 4ga2_A E3 SUMO-protein ligase 98.2 7.1E-06 2.4E-10 68.0 10.2 94 283-397 8-101 (150)
93 1kt0_A FKBP51, 51 kDa FK506-bi 98.2 3.1E-05 1.1E-09 76.6 16.6 116 270-398 266-388 (457)
94 1hz4_A MALT regulatory protein 98.2 7.3E-05 2.5E-09 71.2 18.4 124 278-407 20-144 (373)
95 1qqe_A Vesicular transport pro 98.2 2.5E-05 8.4E-10 72.3 14.2 109 274-386 79-188 (292)
96 3vtx_A MAMA; tetratricopeptide 98.2 2.1E-05 7.1E-10 66.9 12.5 91 279-385 80-170 (184)
97 3ieg_A DNAJ homolog subfamily 98.2 4.9E-05 1.7E-09 71.1 15.8 118 272-407 234-352 (359)
98 1fch_A Peroxisomal targeting s 98.1 4E-05 1.4E-09 72.5 15.2 119 277-411 222-343 (368)
99 2pl2_A Hypothetical conserved 98.1 2.9E-05 9.8E-10 68.5 12.9 97 274-386 41-148 (217)
100 3uq3_A Heat shock protein STI1 98.1 7.2E-05 2.5E-09 66.5 15.4 114 275-406 142-255 (258)
101 2e2e_A Formate-dependent nitri 98.1 5.4E-05 1.8E-09 63.9 13.7 117 273-410 45-164 (177)
102 4i17_A Hypothetical protein; T 98.1 4.3E-05 1.5E-09 67.4 13.4 113 274-404 78-223 (228)
103 2if4_A ATFKBP42; FKBP-like, al 98.1 1.6E-05 5.3E-10 75.6 11.1 118 269-404 176-307 (338)
104 2kck_A TPR repeat; tetratricop 98.1 1.6E-05 5.3E-10 60.9 9.2 93 279-385 13-106 (112)
105 2pl2_A Hypothetical conserved 98.1 3.1E-05 1.1E-09 68.3 12.0 101 276-397 9-120 (217)
106 2yhc_A BAMD, UPF0169 lipoprote 98.1 0.0001 3.4E-09 65.2 15.0 123 274-411 43-197 (225)
107 1fch_A Peroxisomal targeting s 98.1 1.9E-05 6.6E-10 74.6 10.8 112 274-393 253-367 (368)
108 3uq3_A Heat shock protein STI1 98.0 6.6E-05 2.3E-09 66.8 13.7 104 272-385 5-108 (258)
109 1zu2_A Mitochondrial import re 98.0 3.9E-05 1.3E-09 63.9 10.9 100 287-407 17-137 (158)
110 2vq2_A PILW, putative fimbrial 98.0 0.00016 5.4E-09 62.8 15.3 94 278-385 48-142 (225)
111 4i17_A Hypothetical protein; T 98.0 5.2E-05 1.8E-09 66.9 12.0 97 274-385 9-105 (228)
112 2ho1_A Type 4 fimbrial biogene 98.0 8.8E-05 3E-09 66.1 13.7 91 281-385 80-170 (252)
113 2fo7_A Synthetic consensus TPR 98.0 0.00018 6.1E-09 56.5 14.1 91 279-385 8-98 (136)
114 4gco_A Protein STI-1; structur 98.0 5E-05 1.7E-09 60.8 10.7 75 309-396 8-82 (126)
115 1hh8_A P67PHOX, NCF-2, neutrop 98.0 4.6E-05 1.6E-09 66.2 11.4 104 275-386 40-151 (213)
116 2ho1_A Type 4 fimbrial biogene 98.0 0.00013 4.6E-09 64.9 14.6 93 278-384 111-203 (252)
117 2kat_A Uncharacterized protein 98.0 5.6E-05 1.9E-09 59.0 10.7 84 290-389 3-86 (115)
118 3as5_A MAMA; tetratricopeptide 98.0 0.00019 6.5E-09 60.0 14.8 92 278-385 48-139 (186)
119 1xnf_A Lipoprotein NLPI; TPR, 98.0 7E-05 2.4E-09 67.5 12.4 102 273-395 44-145 (275)
120 2y4t_A DNAJ homolog subfamily 98.0 0.00017 5.8E-09 70.2 16.0 113 275-405 260-373 (450)
121 1hh8_A P67PHOX, NCF-2, neutrop 97.9 8.9E-05 3.1E-09 64.3 11.5 93 275-386 9-101 (213)
122 3urz_A Uncharacterized protein 97.9 0.00018 6.1E-09 62.8 13.4 115 278-411 60-206 (208)
123 3ieg_A DNAJ homolog subfamily 97.9 0.00015 5.1E-09 67.7 13.7 98 272-385 3-100 (359)
124 2vq2_A PILW, putative fimbrial 97.9 0.00025 8.6E-09 61.4 14.2 94 278-385 82-176 (225)
125 4eqf_A PEX5-related protein; a 97.9 2.6E-05 8.8E-10 74.0 8.4 112 275-394 250-365 (365)
126 3ma5_A Tetratricopeptide repea 97.9 3.9E-05 1.3E-09 58.6 7.7 71 311-389 4-74 (100)
127 2fo7_A Synthetic consensus TPR 97.9 0.0002 6.7E-09 56.3 12.1 92 278-385 41-132 (136)
128 3hym_B Cell division cycle pro 97.9 0.00015 5E-09 67.1 13.0 108 278-398 165-273 (330)
129 3u4t_A TPR repeat-containing p 97.9 8.5E-05 2.9E-09 66.9 11.1 95 277-384 8-102 (272)
130 1na3_A Designed protein CTPR2; 97.8 0.0002 7E-09 52.6 11.1 73 313-398 8-80 (91)
131 2vsy_A XCC0866; transferase, g 97.8 0.00015 5.1E-09 73.6 13.6 96 274-385 25-120 (568)
132 4abn_A Tetratricopeptide repea 97.8 0.00024 8.2E-09 70.6 14.8 94 286-397 193-294 (474)
133 3vtx_A MAMA; tetratricopeptide 97.8 0.00025 8.7E-09 59.9 13.0 118 278-411 11-154 (184)
134 2q7f_A YRRB protein; TPR, prot 97.8 0.00014 4.7E-09 64.2 11.6 108 277-405 130-237 (243)
135 3hym_B Cell division cycle pro 97.8 0.00011 3.7E-09 68.0 11.4 111 276-399 197-308 (330)
136 3cv0_A Peroxisome targeting si 97.8 0.00046 1.6E-08 63.6 15.2 98 276-389 176-273 (327)
137 3qou_A Protein YBBN; thioredox 97.8 0.00044 1.5E-08 63.6 14.8 103 274-385 119-248 (287)
138 3as5_A MAMA; tetratricopeptide 97.8 0.00028 9.6E-09 58.9 12.4 94 277-386 81-174 (186)
139 1w3b_A UDP-N-acetylglucosamine 97.8 0.00015 5E-09 69.4 11.6 90 279-384 278-367 (388)
140 2q7f_A YRRB protein; TPR, prot 97.8 0.00043 1.5E-08 60.8 13.9 93 277-385 96-188 (243)
141 3mkr_A Coatomer subunit epsilo 97.8 0.00025 8.6E-09 65.5 12.6 105 284-409 178-283 (291)
142 1xnf_A Lipoprotein NLPI; TPR, 97.8 0.00011 3.8E-09 66.1 10.0 91 283-385 16-106 (275)
143 3cv0_A Peroxisome targeting si 97.8 0.00014 4.7E-09 67.2 10.8 113 275-395 209-325 (327)
144 4abn_A Tetratricopeptide repea 97.7 0.00023 7.9E-09 70.7 12.8 95 274-385 104-208 (474)
145 4b4t_Q 26S proteasome regulato 97.7 0.0011 3.7E-08 64.2 17.3 116 277-395 140-255 (434)
146 2l6j_A TPR repeat-containing p 97.7 0.00029 9.9E-09 53.9 10.5 88 314-414 4-94 (111)
147 2xpi_A Anaphase-promoting comp 97.7 0.00049 1.7E-08 69.6 14.4 110 276-400 479-589 (597)
148 2xev_A YBGF; tetratricopeptide 97.7 0.00024 8.3E-09 56.0 9.5 83 317-409 5-87 (129)
149 2gw1_A Mitochondrial precursor 97.7 0.00035 1.2E-08 69.0 12.7 99 271-386 5-103 (514)
150 4b4t_Q 26S proteasome regulato 97.7 0.0004 1.4E-08 67.3 12.9 76 311-388 132-207 (434)
151 3gyz_A Chaperone protein IPGC; 97.7 0.0002 6.9E-09 59.4 9.2 77 308-397 30-106 (151)
152 2h6f_A Protein farnesyltransfe 97.6 0.00029 1E-08 67.9 11.5 62 316-385 168-229 (382)
153 3u4t_A TPR repeat-containing p 97.6 0.00013 4.3E-09 65.8 8.5 96 277-385 42-137 (272)
154 1w3b_A UDP-N-acetylglucosamine 97.6 0.00058 2E-08 65.1 13.5 87 282-384 247-333 (388)
155 2l6j_A TPR repeat-containing p 97.6 4E-05 1.4E-09 58.9 4.2 95 273-379 5-101 (111)
156 2r5s_A Uncharacterized protein 97.6 0.00013 4.3E-09 61.8 7.7 102 276-385 10-137 (176)
157 2h21_A Ribulose-1,5 bisphospha 97.6 7.2E-05 2.5E-09 73.7 6.6 83 148-234 159-257 (440)
158 2y4t_A DNAJ homolog subfamily 97.6 0.0017 5.9E-08 62.9 16.5 104 273-385 212-324 (450)
159 1wao_1 Serine/threonine protei 97.6 3.3E-05 1.1E-09 77.0 3.9 109 273-397 41-162 (477)
160 3upv_A Heat shock protein STI1 97.6 0.00053 1.8E-08 54.1 10.4 65 313-385 3-67 (126)
161 3rkv_A Putative peptidylprolyl 97.6 0.00041 1.4E-08 57.5 10.2 74 312-385 9-92 (162)
162 1a17_A Serine/threonine protei 97.5 0.0015 5E-08 53.7 13.1 100 275-388 50-149 (166)
163 2xpi_A Anaphase-promoting comp 97.5 0.0011 3.9E-08 66.9 14.8 103 281-398 450-553 (597)
164 1elr_A TPR2A-domain of HOP; HO 97.5 0.00076 2.6E-08 52.7 10.8 88 313-409 3-90 (131)
165 2h6f_A Protein farnesyltransfe 97.5 0.00029 9.8E-09 68.0 9.7 87 283-385 177-269 (382)
166 2e2e_A Formate-dependent nitri 97.5 0.00014 4.8E-09 61.3 6.7 96 281-397 19-117 (177)
167 2hr2_A Hypothetical protein; a 97.5 0.0012 4E-08 55.0 12.0 93 314-408 11-112 (159)
168 3sz7_A HSC70 cochaperone (SGT) 97.5 0.00078 2.7E-08 56.0 10.7 68 310-385 7-74 (164)
169 3mkr_A Coatomer subunit epsilo 97.5 0.0012 4E-08 61.0 12.7 100 279-397 137-236 (291)
170 2v5f_A Prolyl 4-hydroxylase su 97.5 0.0021 7.1E-08 49.3 12.1 80 316-401 7-86 (104)
171 2vgx_A Chaperone SYCD; alterna 97.5 0.0011 3.7E-08 54.4 11.2 75 310-397 17-91 (148)
172 2xcb_A PCRH, regulatory protei 97.4 0.0013 4.4E-08 53.2 11.2 76 309-397 13-88 (142)
173 2vsy_A XCC0866; transferase, g 97.4 0.001 3.5E-08 67.4 12.8 96 275-386 60-158 (568)
174 2gw1_A Mitochondrial precursor 97.4 0.0018 6.3E-08 63.7 14.1 116 275-405 375-493 (514)
175 1p5q_A FKBP52, FK506-binding p 97.4 0.0018 6.1E-08 61.1 13.3 103 272-390 196-299 (336)
176 2lni_A Stress-induced-phosphop 97.4 0.00081 2.8E-08 52.9 9.1 71 307-385 9-79 (133)
177 3fp2_A TPR repeat-containing p 97.4 0.0014 4.8E-08 65.1 12.9 94 271-380 24-117 (537)
178 1na3_A Designed protein CTPR2; 97.3 0.0025 8.7E-08 46.4 10.7 79 276-370 13-91 (91)
179 2pzi_A Probable serine/threoni 97.3 0.00051 1.7E-08 71.5 9.1 94 275-385 436-529 (681)
180 2dba_A Smooth muscle cell asso 97.3 0.0017 5.7E-08 52.1 10.2 71 310-385 24-94 (148)
181 3fp2_A TPR repeat-containing p 97.3 0.0028 9.5E-08 62.9 13.8 93 277-385 281-373 (537)
182 2pzi_A Probable serine/threoni 97.3 0.00069 2.3E-08 70.5 9.5 95 283-385 402-496 (681)
183 3q49_B STIP1 homology and U bo 97.3 0.0016 5.4E-08 51.8 9.7 66 312-385 7-72 (137)
184 1hxi_A PEX5, peroxisome target 97.3 0.0032 1.1E-07 49.6 11.3 69 316-397 19-87 (121)
185 2kc7_A BFR218_protein; tetratr 97.2 0.0011 3.8E-08 49.6 8.1 67 318-397 4-71 (99)
186 1ouv_A Conserved hypothetical 97.2 0.0027 9.3E-08 57.2 11.9 81 285-385 55-143 (273)
187 2vyi_A SGTA protein; chaperone 97.2 0.0027 9.4E-08 49.3 10.3 68 310-385 8-75 (131)
188 1na0_A Designed protein CTPR3; 97.2 0.0029 1E-07 48.6 9.9 64 314-385 9-72 (125)
189 1elw_A TPR1-domain of HOP; HOP 97.1 0.0042 1.4E-07 47.3 10.3 64 314-385 4-67 (118)
190 4f3v_A ESX-1 secretion system 97.1 0.0065 2.2E-07 55.6 13.0 95 278-385 141-237 (282)
191 2kck_A TPR repeat; tetratricop 97.1 0.00084 2.9E-08 50.9 5.7 62 316-385 8-69 (112)
192 3db5_A PR domain zinc finger p 97.0 0.00037 1.3E-08 57.7 3.3 40 182-221 97-139 (151)
193 3k9i_A BH0479 protein; putativ 96.9 0.0018 6.1E-08 50.4 6.5 62 326-397 2-63 (117)
194 3ep0_A PR domain zinc finger p 96.9 0.00054 1.9E-08 57.6 3.3 40 182-221 101-143 (170)
195 3qou_A Protein YBBN; thioredox 96.9 0.0041 1.4E-07 57.1 9.6 69 310-386 215-285 (287)
196 4f3v_A ESX-1 secretion system 96.9 0.0052 1.8E-07 56.2 10.0 89 279-383 109-198 (282)
197 1ihg_A Cyclophilin 40; ppiase 96.9 0.004 1.4E-07 59.6 9.8 72 314-385 223-302 (370)
198 1ouv_A Conserved hypothetical 96.8 0.0092 3.1E-07 53.7 11.2 81 285-385 91-179 (273)
199 2r5s_A Uncharacterized protein 96.8 0.0048 1.7E-07 51.8 8.6 67 314-386 108-174 (176)
200 2c2l_A CHIP, carboxy terminus 96.7 0.0033 1.1E-07 57.5 7.9 64 314-385 4-67 (281)
201 3bee_A Putative YFRE protein; 96.7 0.012 3.9E-07 44.2 9.6 82 315-409 7-91 (93)
202 2kc7_A BFR218_protein; tetratr 96.7 0.0035 1.2E-07 46.8 6.7 60 277-343 5-64 (99)
203 2fbn_A 70 kDa peptidylprolyl i 96.7 0.0069 2.4E-07 51.8 9.3 88 273-376 89-176 (198)
204 1pc2_A Mitochondria fission pr 96.7 0.032 1.1E-06 45.8 12.3 85 312-408 30-118 (152)
205 3ffl_A Anaphase-promoting comp 96.7 0.036 1.2E-06 46.0 12.6 104 277-380 25-146 (167)
206 3dal_A PR domain zinc finger p 96.5 0.0014 4.7E-08 56.4 3.3 41 182-222 131-174 (196)
207 3ma5_A Tetratricopeptide repea 96.5 0.014 4.8E-07 43.9 8.7 62 276-345 11-72 (100)
208 1kt0_A FKBP51, 51 kDa FK506-bi 96.4 0.012 3.9E-07 58.0 10.1 90 273-378 318-407 (457)
209 3ihx_A PR domain zinc finger p 96.3 0.0022 7.4E-08 52.9 3.3 40 182-221 96-138 (152)
210 2ond_A Cleavage stimulation fa 96.3 0.015 5E-07 53.7 9.2 83 289-385 81-163 (308)
211 2ond_A Cleavage stimulation fa 96.1 0.04 1.4E-06 50.7 11.5 94 285-385 112-232 (308)
212 3ray_A PR domain-containing pr 96.0 0.0045 1.5E-07 54.5 3.7 41 182-222 140-183 (237)
213 3rjv_A Putative SEL1 repeat pr 96.0 0.031 1E-06 48.5 9.2 64 316-385 87-158 (212)
214 2if4_A ATFKBP42; FKBP-like, al 96.0 0.012 4E-07 55.4 7.0 96 274-385 232-328 (338)
215 3txn_A 26S proteasome regulato 95.8 0.2 6.8E-06 48.0 14.9 107 277-387 104-212 (394)
216 3rjv_A Putative SEL1 repeat pr 95.7 0.073 2.5E-06 46.0 10.7 65 312-385 123-197 (212)
217 2ff4_A Probable regulatory pro 95.7 0.23 7.7E-06 47.6 14.8 112 282-401 125-251 (388)
218 2kat_A Uncharacterized protein 95.6 0.081 2.8E-06 40.4 9.2 64 274-345 21-84 (115)
219 2v5f_A Prolyl 4-hydroxylase su 95.4 0.3 1E-05 36.8 11.9 73 277-355 10-82 (104)
220 1klx_A Cysteine rich protein B 95.4 0.12 4E-06 41.4 10.0 82 284-385 37-126 (138)
221 2o8p_A 14-3-3 domain containin 94.8 0.3 1E-05 42.5 11.2 98 292-389 98-201 (227)
222 2ooe_A Cleavage stimulation fa 94.7 0.41 1.4E-05 47.4 14.0 53 283-342 332-384 (530)
223 2yqq_A Zinc finger HIT domain- 94.6 0.021 7.3E-07 37.9 2.7 38 27-70 12-49 (56)
224 3u64_A Protein TP_0956; tetrat 94.5 0.19 6.7E-06 45.7 9.7 86 289-388 180-272 (301)
225 1xi4_A Clathrin heavy chain; a 94.1 0.31 1.1E-05 53.8 11.8 64 316-382 1136-1221(1630)
226 1xi4_A Clathrin heavy chain; a 94.0 0.17 5.8E-06 55.9 9.6 94 276-385 1199-1309(1630)
227 3mv2_B Coatomer subunit epsilo 94.0 0.55 1.9E-05 43.3 11.9 106 287-408 193-300 (310)
228 1klx_A Cysteine rich protein B 94.0 0.15 5E-06 40.9 7.1 76 287-384 10-89 (138)
229 2ooe_A Cleavage stimulation fa 93.9 0.22 7.5E-06 49.5 9.8 86 285-384 292-384 (530)
230 1x4s_A Protein FON, zinc finge 93.9 0.018 6.2E-07 38.5 1.1 36 27-68 11-49 (59)
231 1nzn_A CGI-135 protein, fissio 93.6 1.4 4.9E-05 34.6 12.0 86 312-406 33-119 (126)
232 1b89_A Protein (clathrin heavy 93.6 0.095 3.3E-06 50.9 6.2 82 279-385 155-236 (449)
233 2xm6_A Protein corresponding t 93.6 0.53 1.8E-05 46.1 11.8 80 285-384 56-143 (490)
234 2xm6_A Protein corresponding t 93.5 0.45 1.5E-05 46.7 11.2 59 316-384 149-215 (490)
235 1zu2_A Mitochondrial import re 93.5 0.15 5E-06 42.2 6.3 48 288-343 62-120 (158)
236 3bee_A Putative YFRE protein; 92.4 0.57 2E-05 34.6 7.7 65 288-365 25-89 (93)
237 3txn_A 26S proteasome regulato 92.3 5.8 0.0002 37.8 16.5 105 286-398 73-179 (394)
238 4b4t_R RPN7, 26S proteasome re 92.0 1.2 4.2E-05 43.0 11.8 101 277-385 136-237 (429)
239 3ly7_A Transcriptional activat 91.8 0.52 1.8E-05 44.6 8.4 64 313-385 276-339 (372)
240 4h7y_A Dual specificity protei 91.7 2 7E-05 34.9 10.6 87 289-384 36-122 (161)
241 3uzd_A 14-3-3 protein gamma; s 91.7 6.5 0.00022 34.6 15.2 77 330-408 147-227 (248)
242 3e4b_A ALGK; tetratricopeptide 91.5 0.69 2.3E-05 45.0 9.4 25 358-383 285-314 (452)
243 1b89_A Protein (clathrin heavy 91.3 0.13 4.4E-06 50.0 3.7 54 316-385 124-177 (449)
244 4b4t_P 26S proteasome regulato 90.6 5.5 0.00019 38.6 14.8 102 282-388 147-250 (445)
245 1pc2_A Mitochondria fission pr 90.6 1.2 4.1E-05 36.3 8.4 72 273-356 33-108 (152)
246 3ffl_A Anaphase-promoting comp 90.5 3.6 0.00012 33.9 11.1 95 321-415 27-139 (167)
247 3efz_A 14-3-3 protein; 14-3-3, 90.2 6.6 0.00023 34.9 13.4 94 292-385 118-226 (268)
248 1o9d_A 14-3-3-like protein C; 90.0 6.2 0.00021 35.1 13.2 57 330-386 151-208 (260)
249 3o48_A Mitochondria fission 1 89.9 6 0.00021 31.3 11.6 82 313-407 39-124 (134)
250 1y8m_A FIS1; mitochondria, unk 89.9 6.5 0.00022 31.5 12.0 83 312-407 37-123 (144)
251 3e4b_A ALGK; tetratricopeptide 88.8 2.3 7.9E-05 41.2 10.6 28 356-383 248-278 (452)
252 3mv2_B Coatomer subunit epsilo 88.6 3.2 0.00011 38.1 10.7 54 283-342 111-164 (310)
253 2br9_A 14-3-3E, 14-3-3 protein 88.4 12 0.00042 32.7 16.4 61 330-390 146-207 (234)
254 1dce_A Protein (RAB geranylger 88.3 5.4 0.00019 40.0 13.2 87 283-385 39-138 (567)
255 2v6y_A AAA family ATPase, P60 88.0 3.6 0.00012 29.6 8.5 59 355-413 10-70 (83)
256 4g26_A Pentatricopeptide repea 87.8 3.8 0.00013 40.4 11.5 88 283-384 116-203 (501)
257 2w2u_A Hypothetical P60 katani 87.2 4.2 0.00014 29.3 8.4 57 356-412 19-77 (83)
258 3ubw_A 14-3-3E, 14-3-3 protein 85.9 18 0.00062 32.0 16.4 77 330-408 172-252 (261)
259 2npm_A 14-3-3 domain containin 85.9 18 0.00062 32.0 15.3 59 330-389 172-231 (260)
260 3iqu_A 14-3-3 protein sigma; s 85.9 17 0.00058 31.7 16.3 60 330-389 149-209 (236)
261 1ya0_A SMG-7 transcript varian 85.3 1.7 5.9E-05 42.8 7.3 63 314-384 152-214 (497)
262 3re2_A Predicted protein; meni 84.9 8.7 0.0003 35.7 11.0 54 333-389 276-329 (472)
263 1nzn_A CGI-135 protein, fissio 84.8 7.2 0.00025 30.5 9.3 41 303-343 62-103 (126)
264 3dra_A Protein farnesyltransfe 84.7 7.5 0.00026 35.6 11.0 100 263-385 30-139 (306)
265 2wpv_A GET4, UPF0363 protein Y 84.7 17 0.00058 33.3 13.2 60 285-346 26-85 (312)
266 4gq4_A Menin; tumor suppressor 82.9 8.1 0.00028 36.6 10.2 72 333-407 283-356 (489)
267 3u84_A Menin; MLL, JUND, ledgf 82.1 13 0.00046 35.1 11.2 54 333-389 298-351 (550)
268 2ff4_A Probable regulatory pro 81.6 9.7 0.00033 36.1 10.8 82 273-362 172-254 (388)
269 3mkq_A Coatomer beta'-subunit; 81.6 3.9 0.00013 42.3 8.8 92 315-407 682-792 (814)
270 2o8p_A 14-3-3 domain containin 81.0 14 0.00048 32.0 10.5 63 283-345 136-199 (227)
271 4g26_A Pentatricopeptide repea 79.5 21 0.00071 35.1 12.7 62 315-383 106-167 (501)
272 3iqu_A 14-3-3 protein sigma; s 78.3 6.6 0.00023 34.3 7.6 56 289-344 150-206 (236)
273 4gns_B Protein CSD3, chitin bi 77.4 8.3 0.00028 40.0 9.3 59 316-382 339-397 (754)
274 1lv3_A Hypothetical protein YA 77.1 0.84 2.9E-05 31.4 1.2 13 47-59 27-39 (68)
275 2br9_A 14-3-3E, 14-3-3 protein 77.0 7.4 0.00025 34.1 7.5 57 289-345 147-204 (234)
276 3uzd_A 14-3-3 protein gamma; s 76.9 7.5 0.00026 34.3 7.5 58 289-346 148-206 (248)
277 1wfd_A Hypothetical protein 15 76.5 15 0.00052 26.9 8.1 45 271-315 14-59 (93)
278 3u64_A Protein TP_0956; tetrat 76.2 27 0.00094 31.6 11.2 53 329-387 178-235 (301)
279 1wfd_A Hypothetical protein 15 76.1 14 0.00047 27.2 7.8 54 354-407 13-68 (93)
280 3ubw_A 14-3-3E, 14-3-3 protein 75.5 8.5 0.00029 34.1 7.5 57 289-345 173-230 (261)
281 1dce_A Protein (RAB geranylger 75.4 12 0.0004 37.6 9.7 83 287-385 124-221 (567)
282 3spa_A Mtrpol, DNA-directed RN 75.0 19 0.00065 38.7 11.2 94 279-383 134-228 (1134)
283 3ly7_A Transcriptional activat 74.7 18 0.00061 34.0 10.0 34 352-385 273-306 (372)
284 3dss_A Geranylgeranyl transfer 74.4 50 0.0017 30.4 13.0 97 275-384 32-138 (331)
285 1o9d_A 14-3-3-like protein C; 74.3 9.3 0.00032 33.9 7.5 56 289-344 152-208 (260)
286 3lpz_A GET4 (YOR164C homolog); 73.8 56 0.0019 30.1 14.2 61 285-347 25-88 (336)
287 2v6x_A Vacuolar protein sortin 73.5 17 0.00057 26.0 7.6 55 353-407 10-66 (85)
288 1y8m_A FIS1; mitochondria, unk 72.6 21 0.00071 28.5 8.4 78 259-343 16-106 (144)
289 4a5x_A MITD1, MIT domain-conta 72.4 18 0.00063 26.0 7.5 52 356-407 16-69 (86)
290 2npm_A 14-3-3 domain containin 71.6 12 0.0004 33.3 7.5 55 289-344 173-228 (260)
291 4b4t_S RPN3, 26S proteasome re 71.1 17 0.0006 35.7 9.3 74 305-384 222-298 (523)
292 3efz_A 14-3-3 protein; 14-3-3, 69.7 10 0.00035 33.7 6.7 54 290-343 170-226 (268)
293 3dra_A Protein farnesyltransfe 68.4 29 0.00099 31.6 9.9 85 287-384 84-174 (306)
294 4e6h_A MRNA 3'-END-processing 68.0 31 0.0011 35.3 10.9 93 285-385 356-463 (679)
295 4b4t_P 26S proteasome regulato 67.2 32 0.0011 33.2 10.4 71 313-386 136-207 (445)
296 2cpt_A SKD1 protein, vacuolar 66.8 19 0.00064 27.7 6.9 37 354-390 16-52 (117)
297 3o48_A Mitochondria fission 1 66.6 20 0.0007 28.2 7.1 77 259-343 17-107 (134)
298 3q7a_A Farnesyltransferase alp 65.7 35 0.0012 31.7 9.9 81 288-384 70-153 (349)
299 1zbp_A Hypothetical protein VP 65.2 51 0.0017 29.4 10.3 52 280-339 5-56 (273)
300 4e6h_A MRNA 3'-END-processing 64.3 34 0.0012 35.0 10.4 96 283-385 389-499 (679)
301 1wfp_A Zinc finger (AN1-like) 63.6 5.3 0.00018 27.9 2.8 27 25-53 23-51 (74)
302 4b4t_O 26S proteasome regulato 62.0 82 0.0028 29.6 12.0 96 285-380 89-193 (393)
303 3mkq_B Coatomer subunit alpha; 61.3 44 0.0015 27.7 8.7 99 283-394 16-132 (177)
304 4b4t_R RPN7, 26S proteasome re 59.3 22 0.00076 34.0 7.6 70 314-388 131-200 (429)
305 1vq8_Z 50S ribosomal protein L 59.0 2 6.8E-05 31.0 0.0 28 230-259 27-54 (83)
306 1pft_A TFIIB, PFTFIIBN; N-term 59.0 4.5 0.00015 25.8 1.8 27 235-261 8-35 (50)
307 2d2s_A Exocyst complex compone 59.0 90 0.0031 27.1 17.7 138 263-409 9-180 (235)
308 3o10_A Sacsin; all-helical dom 57.2 51 0.0017 26.0 8.2 39 260-298 4-42 (141)
309 1wfh_A Zinc finger (AN1-like) 56.5 7.4 0.00025 26.3 2.5 27 25-53 13-41 (64)
310 1wg2_A Zinc finger (AN1-like) 56.5 7.1 0.00024 26.4 2.4 26 26-53 14-41 (64)
311 3dss_A Geranylgeranyl transfer 54.4 66 0.0023 29.6 9.6 82 287-384 125-221 (331)
312 1gh9_A 8.3 kDa protein (gene M 53.8 2.5 8.5E-05 29.5 -0.2 25 235-261 7-31 (71)
313 3spa_A Mtrpol, DNA-directed RN 53.7 63 0.0021 34.8 10.2 71 309-383 122-192 (1134)
314 2cpt_A SKD1 protein, vacuolar 52.4 65 0.0022 24.6 7.7 35 272-306 18-52 (117)
315 2l8e_A Polyhomeotic-like prote 51.8 5.1 0.00017 25.6 1.0 30 27-58 18-47 (49)
316 3mkq_B Coatomer subunit alpha; 51.1 24 0.00082 29.3 5.4 55 321-388 12-66 (177)
317 2rpa_A Katanin P60 ATPase-cont 50.6 56 0.0019 23.0 6.4 34 358-391 14-47 (78)
318 3jyw_9 60S ribosomal protein L 49.8 13 0.00044 25.8 2.9 30 230-261 26-55 (72)
319 1x4w_A Hypothetical protein FL 49.1 11 0.00036 25.9 2.3 26 26-53 14-44 (67)
320 2xze_A STAM-binding protein; h 48.9 34 0.0012 27.4 5.8 45 353-398 37-81 (146)
321 4b4t_O 26S proteasome regulato 48.9 81 0.0028 29.7 9.5 74 321-394 83-165 (393)
322 2crb_A Nuclear receptor bindin 48.5 76 0.0026 23.1 7.7 39 355-393 14-52 (97)
323 4gns_B Protein CSD3, chitin bi 48.3 63 0.0022 33.4 9.1 53 278-338 343-395 (754)
324 3mv2_A Coatomer subunit alpha; 48.0 1.6E+02 0.0056 26.8 11.1 105 307-411 20-169 (325)
325 1vh6_A Flagellar protein FLIS; 47.9 84 0.0029 25.0 8.0 88 261-349 21-122 (145)
326 2dl1_A Spartin; SPG20, MIT, st 47.1 93 0.0032 23.7 7.7 22 368-389 34-55 (116)
327 2ijq_A Hypothetical protein; s 44.4 1.2E+02 0.0041 24.6 8.5 65 322-390 40-109 (161)
328 1wff_A Riken cDNA 2810002D23 p 43.9 17 0.0006 26.0 2.9 27 25-53 23-52 (85)
329 3j20_Y 30S ribosomal protein S 42.8 8.5 0.00029 24.7 1.0 25 235-259 22-46 (50)
330 3j21_g 50S ribosomal protein L 42.3 11 0.00039 24.2 1.6 21 235-259 17-37 (51)
331 1wfl_A Zinc finger protein 216 42.2 14 0.00046 25.8 2.0 26 26-53 24-51 (74)
332 3ga8_A HTH-type transcriptiona 41.8 27 0.00092 24.4 3.7 32 249-280 35-67 (78)
333 1om2_A Protein (mitochondrial 41.2 57 0.0019 23.9 5.4 53 361-415 25-87 (95)
334 3mkq_A Coatomer beta'-subunit; 41.0 1.6E+02 0.0054 29.9 11.2 18 281-298 690-707 (814)
335 1dl6_A Transcription factor II 39.7 15 0.0005 24.4 1.9 27 235-261 14-41 (58)
336 1wy6_A Hypothetical protein ST 39.5 90 0.0031 24.9 6.6 41 343-384 113-153 (172)
337 2v6y_A AAA family ATPase, P60 39.3 99 0.0034 21.8 7.3 37 269-305 8-44 (83)
338 4gq4_A Menin; tumor suppressor 38.4 2.3E+02 0.0078 27.0 10.2 73 289-364 281-354 (489)
339 2fnf_X Putative RAS effector N 37.3 21 0.00073 24.7 2.5 32 25-58 33-66 (72)
340 2cwy_A Hypothetical protein TT 37.1 44 0.0015 24.4 4.4 62 323-390 10-73 (94)
341 3q7a_A Farnesyltransferase alp 36.3 1E+02 0.0035 28.5 7.8 85 287-384 140-236 (349)
342 3t5v_B Nuclear mRNA export pro 35.4 40 0.0014 32.6 5.0 73 312-386 174-250 (455)
343 2yuu_A NPKC-delta, protein kin 35.2 24 0.00082 25.1 2.6 42 15-58 16-62 (83)
344 4b6d_A RAC GTPase-activating p 34.1 12 0.0004 25.1 0.7 31 26-58 18-52 (61)
345 3lrq_A E3 ubiquitin-protein li 34.1 13 0.00046 27.4 1.1 43 27-71 22-65 (100)
346 3j21_V 50S ribosomal protein L 34.0 20 0.00068 24.4 1.8 32 27-58 4-40 (66)
347 2pk7_A Uncharacterized protein 33.8 19 0.00066 24.8 1.8 25 235-259 11-35 (69)
348 2w2u_A Hypothetical P60 katani 33.8 1.3E+02 0.0043 21.3 8.8 36 269-304 16-51 (83)
349 1brv_A Protein G, BRSV-G regio 33.7 14 0.00046 21.0 0.8 22 36-57 10-31 (32)
350 4a5x_A MITD1, MIT domain-conta 33.6 1.3E+02 0.0044 21.4 7.7 41 273-313 17-58 (86)
351 1wvo_A Sialic acid synthase; a 33.2 17 0.00058 25.8 1.4 19 204-222 8-26 (79)
352 3uej_A NPKC-delta, protein kin 32.9 19 0.00066 24.2 1.7 32 25-58 18-54 (65)
353 2k4x_A 30S ribosomal protein S 32.2 20 0.00068 23.4 1.6 25 235-259 21-45 (55)
354 1faq_A RAF-1; transferase, ser 31.8 15 0.00053 23.3 1.0 32 25-58 12-44 (52)
355 3re2_A Predicted protein; meni 31.5 1.5E+02 0.0051 27.6 7.7 72 290-364 275-347 (472)
356 2con_A RUH-035 protein, NIN on 31.5 20 0.0007 25.3 1.6 23 26-48 14-39 (79)
357 2rpa_A Katanin P60 ATPase-cont 31.5 80 0.0027 22.2 4.7 39 318-356 16-55 (78)
358 1qsa_A Protein (soluble lytic 31.0 1.2E+02 0.0041 30.6 7.8 58 319-384 290-347 (618)
359 2wb7_A PT26-6P; extra chromoso 30.6 2.1E+02 0.0072 27.8 8.9 40 331-370 449-488 (526)
360 2hf1_A Tetraacyldisaccharide-1 30.5 20 0.00068 24.6 1.4 25 235-259 11-35 (68)
361 2jny_A Uncharacterized BCR; st 30.0 21 0.00071 24.4 1.4 30 227-258 7-36 (67)
362 4h7y_A Dual specificity protei 29.9 1.2E+02 0.004 24.6 6.0 49 286-342 74-122 (161)
363 3eab_A Spastin; spastin, MIT, 29.7 1.3E+02 0.0043 21.8 5.6 19 370-388 33-51 (89)
364 2jr6_A UPF0434 protein NMA0874 29.5 21 0.00072 24.5 1.4 25 235-259 11-35 (68)
365 3t5x_A PCI domain-containing p 29.2 63 0.0022 27.3 4.7 33 353-385 11-43 (203)
366 2js4_A UPF0434 protein BB2007; 29.0 20 0.00069 24.7 1.2 25 235-259 11-35 (70)
367 1rfh_A RAS association (ralgds 28.6 26 0.00088 23.1 1.7 32 25-58 20-53 (59)
368 3j21_i 50S ribosomal protein L 28.3 15 0.0005 26.3 0.4 29 230-260 35-63 (83)
369 3ax2_A Mitochondrial import re 28.3 56 0.0019 22.7 3.4 26 360-385 21-46 (73)
370 1vdy_A Hypothetical protein (R 28.1 92 0.0031 24.6 5.1 24 344-367 17-40 (140)
371 3iqc_A FLIS, flagellar protein 28.0 2.1E+02 0.0072 22.1 12.0 91 260-350 23-128 (131)
372 3iz5_m 60S ribosomal protein L 28.0 17 0.0006 26.5 0.8 29 230-260 36-64 (92)
373 3kae_A CDC27, possible protein 27.4 2.6E+02 0.0091 23.1 7.8 77 305-385 55-143 (242)
374 4a1g_A Mitotic checkpoint seri 27.4 2.4E+02 0.0081 22.6 9.4 44 342-385 86-130 (152)
375 3qt1_I DNA-directed RNA polyme 27.0 38 0.0013 26.6 2.7 25 235-259 27-55 (133)
376 2uy1_A Cleavage stimulation fa 26.2 3.5E+02 0.012 26.0 10.2 14 329-342 335-348 (493)
377 2ra1_A Surface layer protein; 25.6 4.2E+02 0.014 24.8 11.8 52 353-407 170-221 (412)
378 2enz_A NPKC-theta, protein kin 25.6 41 0.0014 22.5 2.3 33 24-58 20-57 (65)
379 1ptq_A Protein kinase C delta 25.4 25 0.00087 21.9 1.2 32 25-58 9-45 (50)
380 3lpz_A GET4 (YOR164C homolog); 25.3 3.9E+02 0.013 24.4 10.3 30 311-340 32-61 (336)
381 2row_A RHO-associated protein 25.3 66 0.0023 23.0 3.5 33 24-58 32-71 (84)
382 1orj_A Flagellar protein FLIS; 25.2 2.4E+02 0.0081 21.8 8.3 89 261-349 17-122 (130)
383 3na7_A HP0958; flagellar bioge 25.1 27 0.00092 30.9 1.6 25 27-51 198-234 (256)
384 1kbe_A Kinase suppressor of RA 25.1 17 0.00056 23.2 0.2 30 27-58 14-44 (49)
385 3iz5_Z 60S ribosomal protein L 25.0 22 0.00077 28.8 1.0 32 27-58 5-41 (162)
386 4a17_T RPL24, 60S ribosomal pr 24.8 22 0.00076 28.7 0.9 32 27-58 5-41 (158)
387 3izc_m 60S ribosomal protein R 24.8 21 0.0007 26.1 0.7 29 230-260 36-64 (92)
388 2v6x_A Vacuolar protein sortin 24.7 1.8E+02 0.0062 20.3 8.6 34 272-305 13-46 (85)
389 3u84_A Menin; MLL, JUND, ledgf 24.7 2.2E+02 0.0076 27.0 7.7 72 290-364 297-369 (550)
390 2yrc_A Protein transport prote 24.7 27 0.00093 23.1 1.2 25 235-259 12-42 (59)
391 1wys_A Riken cDNA 2310008M20 p 24.4 38 0.0013 23.7 2.0 41 26-72 13-56 (75)
392 2crb_A Nuclear receptor bindin 23.9 1.5E+02 0.0052 21.5 5.0 35 313-347 14-48 (97)
393 1twf_L ABC10-alpha, DNA-direct 23.9 38 0.0013 23.3 1.9 26 25-50 26-57 (70)
394 1y8f_A UNC-13 homolog A, MUNC1 23.8 26 0.00091 23.6 1.1 32 25-58 22-58 (66)
395 3h0g_L DNA-directed RNA polyme 23.8 53 0.0018 22.1 2.5 23 25-47 19-46 (63)
396 3myv_A SUSD superfamily protei 23.5 1.5E+02 0.0052 28.3 6.9 35 310-344 186-220 (454)
397 2vkj_A TM1634; membrane protei 23.4 1.3E+02 0.0046 21.6 4.6 32 270-301 51-82 (106)
398 4a17_Y RPL37A, 60S ribosomal p 23.4 45 0.0016 24.8 2.3 28 230-259 36-63 (103)
399 1z60_A TFIIH basal transcripti 23.1 34 0.0012 22.7 1.4 28 27-56 15-45 (59)
400 2a9u_A Ubiquitin carboxyl-term 22.6 2.9E+02 0.0098 21.8 9.9 73 315-390 43-115 (144)
401 3izc_Z 60S ribosomal protein R 22.6 27 0.00093 28.1 1.0 32 27-58 3-39 (155)
402 1vq8_U 50S ribosomal protein L 22.5 36 0.0012 23.2 1.4 32 27-58 3-39 (66)
403 1x4v_A Hypothetical protein LO 22.5 51 0.0018 22.1 2.2 26 26-52 11-39 (63)
404 3kez_A Putative sugar binding 22.4 1.7E+02 0.0058 28.0 7.0 34 310-343 192-225 (461)
405 2das_A Zinc finger MYM-type pr 22.3 41 0.0014 22.2 1.7 32 26-58 19-54 (62)
406 1l8d_A DNA double-strand break 22.0 1.8E+02 0.0061 21.5 5.7 19 250-268 47-65 (112)
407 1ffk_W Ribosomal protein L37AE 21.9 23 0.00079 24.7 0.4 29 230-260 27-55 (73)
408 6rxn_A Rubredoxin; electron tr 21.9 34 0.0012 21.4 1.2 12 249-260 29-40 (46)
409 2rkl_A Vacuolar protein sortin 21.6 1.7E+02 0.0058 18.8 4.8 25 363-387 27-51 (53)
410 3u50_C Telomerase-associated p 21.0 29 0.00098 28.7 0.9 26 233-259 43-68 (172)
411 1wy6_A Hypothetical protein ST 20.9 2.6E+02 0.0087 22.3 6.2 50 283-340 102-151 (172)
412 1jjd_A Metallothionein, SMTA; 20.8 45 0.0016 21.7 1.6 11 49-59 29-39 (55)
413 2csz_A Synaptotagmin-like prot 20.7 50 0.0017 23.1 1.9 33 24-58 22-59 (76)
414 1om2_A Protein (mitochondrial 20.6 1.1E+02 0.0039 22.3 3.9 33 319-351 25-67 (95)
415 1y02_A CARP2, FYVE-ring finger 20.3 43 0.0015 25.8 1.7 39 18-58 10-52 (120)
No 1
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=100.00 E-value=2.2e-71 Score=556.63 Aligned_cols=400 Identities=22% Similarity=0.374 Sum_probs=343.3
Q ss_pred CCCCCCCeeEeeCCceeccCCCCCCccCccccCC-CCCcCCCCCCcccccChhhchhhhhhhHhhchhhhhchhhhccCC
Q 014710 3 SFHVSGEVIISQEPYVCVPNNSSSISRCDGCFAS-SNLKKCSACQVVWYCGSNCQKLDWKLHRLECQVLSRLDKEKRKSV 81 (420)
Q Consensus 3 ~~i~~Ge~il~e~p~~~~~~~~~~~~~C~~C~~~-~~~~~C~~C~~~~yCs~~C~~~~~~~H~~EC~~~~~~~~~~~~~~ 81 (420)
++|++||+|+.|+|+++++.......+|++|++. .++.+|++|++++|||++||+.+|++|+.||+.++.+.. .+
T Consensus 25 r~i~~Ge~Il~e~P~~~v~~~~~~~~~C~~C~~~~~~~~~C~~C~~~~yCs~~Cq~~~w~~Hk~eC~~~~~~~~----~p 100 (490)
T 3n71_A 25 KEFWAADVIFAERAYSAVVFDSLINFVCHTCFKRQEKLHRCGQCKFAHYCDRTCQKDAWLNHKNECAAIKKYGK----VP 100 (490)
T ss_dssp SCBCTTCEEEEECCSEEEECGGGTTTBCTTTCCBCSCCEECTTTSCCEESSHHHHHHHHHHHHHHHHHHHHHTS----CC
T ss_pred cCCCCCCEEEecCCceEEecccccCCcCCCCCCCCCCCCCCCCCCCcCcCCHHHhhhhhhHHHHHhHHHHhcCc----CC
Confidence 6899999999999999988877889999999997 458999999999999999999999999999999988742 45
Q ss_pred CHHHHHHHHHHHHHHhcCCCCCCCCCCCchhhHHHHhhccCCCCHHHHHH-HHHHHHHHHHHhc-CCCCCHHHHHHHHHH
Q 014710 82 TPSIRLMLKLYLRRKLQNDNVIPSTTTDNYSLVEALVAHMSDIDEKQLLL-YAQIANLVNLILQ-WPEISINEIAENFSK 159 (420)
Q Consensus 82 ~~~~~l~~r~l~~~~~~~~~~~~~~~~~~~~~~~~L~~h~~~~~~~~~~~-~~~~~~~~~~l~~-~~~~~~~~i~~~~~~ 159 (420)
+..+|+++|+|++...++... ....+..+..|++|.+++.+++... ...+..++..+.. ...++.++|.+++++
T Consensus 101 ~~~~rl~lRiL~~~~~~~~~~----~~~~~~~~~~L~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 176 (490)
T 3n71_A 101 NENIRLAARIMWRVEREGTGL----TEGCLVSVDDLQNHVEHFGEEEQKELRVDVDTFLQYWPPQSQQFSMQYISHIFGV 176 (490)
T ss_dssp CHHHHHHHHHHHHHHHTTSSB----CTTCSSBGGGSCCCGGGCCHHHHHHHHHHHHHHHHHSCTTSCCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhccCccC----cchhhhHHHHHHhhhhhcCchHHHHHHHHHHHHHHHccccccCCCHHHHHHHHHH
Confidence 678899999998765443321 2345677899999999998766432 3334445543322 235789999999999
Q ss_pred hhhcccccccCC-CcccccchhhhccccCCCCcCCceeEEeCC-------------EEEEEEecCCCCCCccCCCh----
Q 014710 160 LACNAHTICNSE-LRPLGTGLYPVISIINHSCLPNAVLVFEGR-------------LAVVRAVQHVPKGAEGQFDD---- 221 (420)
Q Consensus 160 ~~~N~~~i~~~~-~~~~g~glyp~~s~~NHSC~PN~~~~f~~~-------------~~~vra~r~I~~Gee~~~~~---- 221 (420)
+.+|+|+|.+.+ ...+|.||||.+|+|||||+||+.+.|+++ +++|+|+|||++|||||++|
T Consensus 177 ~~~N~f~i~~~~g~~~~g~gl~p~~s~~NHSC~PN~~~~~~~~~~~~~~~~~~~~~~~~v~A~rdI~~GEEltisY~~~~ 256 (490)
T 3n71_A 177 INCNGFTLSDQRGLQAVGVGIFPNLGLVNHDCWPNCTVIFNNGNHEAVKSMFHTQMRIELRALGKISEGEELTVSYIDFL 256 (490)
T ss_dssp HHTTEEEEECTTSCSEEEEEECTTGGGCEECSSCSEEEEEECCCCSSSCCCGGGSCEEEEEESSCBCTTCBCEECSSCSC
T ss_pred HhccCcccccCCCCccceEEEchhhhhcccCCCCCeeEEecCCccccccccccccceEEEEECCCCCCCCEEEEeecCCC
Confidence 999999999876 468899999999999999999999999987 99999999999999987443
Q ss_pred ----HhHHHHhc--CccccCCCCCCCcccCCCCCccccCCCCCccCHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHH
Q 014710 222 ----IQESAILE--GYRCKDDGCSGFLLRDSDDKGFTCQQCGLVRSKEEIKKIASEVNILSKKTLALTSCGNHQEVVSTY 295 (420)
Q Consensus 222 ----~~~~~l~~--~~~C~c~~C~~~~~~~~~~~~~~C~~C~~~~~~~~~~~~~~~~~~l~~~a~~~~~~g~~~~a~~~~ 295 (420)
.|+..|.+ +|.|.|++|....... ....+ .++...+.+.+..+.+.++.+++++..+..+|++++|+.++
T Consensus 257 ~~~~~R~~~L~~~~~F~C~C~~C~~~~~~~-~~~~~---~~~~~~s~e~v~~~l~~a~~~le~a~~~~~qg~~~eA~~l~ 332 (490)
T 3n71_A 257 HLSEERRRQLKKQYYFDCSCEHCQKGLKDD-LFLAA---KEDPKPSQEVVKEMIQFSKDTLEKIDKARSEGLYHEVVKLC 332 (490)
T ss_dssp SCHHHHHHHHHHHHSSCCCCHHHHHTTTHH-HHTCB---CSSSCCCHHHHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHH
T ss_pred CCHHHHHHHHHCCCCeEeeCCCCCCCCccc-chhhc---ccCCCCCHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 36677764 7999999998533110 00112 12334577889998898999999999999999999999999
Q ss_pred HHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHhhcChHHH
Q 014710 296 KMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENA 375 (420)
Q Consensus 296 ~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~~g~~~eA 375 (420)
++++.+++++||++|+.++.++++|+.+|..+|+|++|+.+++++|.+++++||++||.+|..+++||.+|..+|++++|
T Consensus 333 ~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA 412 (490)
T 3n71_A 333 RECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVG 412 (490)
T ss_dssp HHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHhcc
Q 014710 376 IKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEASYK 414 (420)
Q Consensus 376 ~~~l~~A~~i~~~~~G~~h~~~~~~~~~l~~~~~~~~~~ 414 (420)
+.+|++|++|++.++|++||.+.+++.+|.+++.++...
T Consensus 413 ~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~ 451 (490)
T 3n71_A 413 HGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMF 451 (490)
T ss_dssp HHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999877643
No 2
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=100.00 E-value=3.6e-71 Score=546.85 Aligned_cols=393 Identities=23% Similarity=0.472 Sum_probs=330.9
Q ss_pred CCCCCCCeeEeeCCceeccCCCCCCccCccccCC-CCCcCCCCCCcccccChhhchhhhhhhHhhchhhhhchhhhccCC
Q 014710 3 SFHVSGEVIISQEPYVCVPNNSSSISRCDGCFAS-SNLKKCSACQVVWYCGSNCQKLDWKLHRLECQVLSRLDKEKRKSV 81 (420)
Q Consensus 3 ~~i~~Ge~il~e~p~~~~~~~~~~~~~C~~C~~~-~~~~~C~~C~~~~yCs~~C~~~~~~~H~~EC~~~~~~~~~~~~~~ 81 (420)
++|++||+|+.|+|+++++.......+|++|++. .++.+|++|+.++|||++||+.+|++|+.||+.++.+.... .+
T Consensus 25 r~i~~Ge~Il~e~P~a~~~~~~~~~~~C~~C~~~~~~~~~C~~C~~~~yCs~~Cq~~~w~~Hk~eC~~l~~~~~~~--~p 102 (433)
T 3qww_A 25 RPFHVGDLLFSCPAYACVLTVGERGHHCECCFARKEGLSKCGRCKQAFYCDVECQKEDWPLHKLECSSMVVLGENW--NP 102 (433)
T ss_dssp SCBCTTCEEEEEECSEEEECGGGTTTBCTTTCCBCSSCEECTTTSCCEESSHHHHHHHHHHHTTTHHHHHHSSTTC--CC
T ss_pred CCCCCCCEEEecCCceEEecccccCCcCCcccccCCCCCCCCCCcceeecChhhhhhhhhHHHHHHHHHHHhCccC--CC
Confidence 6899999999999999999877889999999997 56899999999999999999999999999999998875432 35
Q ss_pred CHHHHHHHHHHHHHHhcCCCCCCCCCCCchhhHHHHhhccCCCCHHHHHH-HHHHHHHHHHHhcC-CCCCHHHHHHHHHH
Q 014710 82 TPSIRLMLKLYLRRKLQNDNVIPSTTTDNYSLVEALVAHMSDIDEKQLLL-YAQIANLVNLILQW-PEISINEIAENFSK 159 (420)
Q Consensus 82 ~~~~~l~~r~l~~~~~~~~~~~~~~~~~~~~~~~~L~~h~~~~~~~~~~~-~~~~~~~~~~l~~~-~~~~~~~i~~~~~~ 159 (420)
+..+++++|+|++...+++. ...+.+..+..|++|.+++..++... ...+..+...+... ..++.++|++++++
T Consensus 103 ~~~~rl~~Ril~~~~~~~~~----~~~~~~~~~~~L~sh~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~i~~~~~~ 178 (433)
T 3qww_A 103 SETVRLTARILAKQKIHPER----TPSEKLLAVREFESHLDKLDNEKKDLIQSDIAALHQFYSKYLEFPDHSSLVVLFAQ 178 (433)
T ss_dssp CHHHHHHHHHHHHHHHCCSC----CGGGSSCCGGGCCCCGGGCCHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhhhcccc----CchhhhhhHHHHHhhhhccChHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHH
Confidence 66789999999886554321 11235566788999999988764332 22333333333222 34588999999999
Q ss_pred hhhcccccccCCCcccccchhhhccccCCCCcCCceeEEeCCEEEEEEecCCCCCCccC--CCh------HhHHHHhc--
Q 014710 160 LACNAHTICNSELRPLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHVPKGAEGQ--FDD------IQESAILE-- 229 (420)
Q Consensus 160 ~~~N~~~i~~~~~~~~g~glyp~~s~~NHSC~PN~~~~f~~~~~~vra~r~I~~Gee~~--~~~------~~~~~l~~-- 229 (420)
+.+|+|+|.+.+...+|.||||.+|+|||||+||+.+.|+|++++|+|++||++|||++ |.+ .|+..|.+
T Consensus 179 ~~~N~f~i~~~~~~~~g~gl~p~~s~~NHsC~PN~~~~~~~~~~~~~a~r~I~~Geel~i~Y~~~~~~~~~R~~~L~~~~ 258 (433)
T 3qww_A 179 VNCNGFTIEDEELSHLGSAIFPDVALMNHSCCPNVIVTYKGTLAEVRAVQEIHPGDEVFTSYIDLLYPTEDRNDRLRDSY 258 (433)
T ss_dssp HHHHCEEEECTTCCEEEEEECTTGGGSEECSSCSEEEEEETTEEEEEESSCBCTTCEEEECCSCTTSCHHHHHHHHHHHH
T ss_pred HcCCceecccCCccceeEEecccccccCCCCCCCceEEEcCCEEEEEeccCcCCCCEEEEeecCCcCCHHHHHHHHhCcC
Confidence 99999999988888899999999999999999999999999999999999999999986 433 36677764
Q ss_pred CccccCCCCCCCcccCCCCCccccCC--CCCccCHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcC
Q 014710 230 GYRCKDDGCSGFLLRDSDDKGFTCQQ--CGLVRSKEEIKKIASEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYH 307 (420)
Q Consensus 230 ~~~C~c~~C~~~~~~~~~~~~~~C~~--C~~~~~~~~~~~~~~~~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~ 307 (420)
+|.|.|++|..+.. +...|.. |+.....++++.+.......+++..+....|++++|+.++++++++++++||
T Consensus 259 ~F~C~C~~C~~~~~-----d~~~~~~~~~~~~~~~e~v~~~~~~~~~~le~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg 333 (433)
T 3qww_A 259 FFTCECRECTTKDK-----DKAKVEVRKLSSPPQAEAIRDMVRYARNVIEEFRRAKHYKSPSELLEICELSQEKMSSVFE 333 (433)
T ss_dssp SCCCCSHHHHHCTT-----HHHHTCBCCCSSCCCHHHHHHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTTBC
T ss_pred CEEeECCCCCCCCc-----chhhhhhhhcCCCccHHHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHHHhhCccC
Confidence 79999999985321 1222322 3334566777777766666666666666789999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHH
Q 014710 308 PFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILR 387 (420)
Q Consensus 308 ~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~ 387 (420)
++|+.++.++++|+.+|..+|+|++|+.+++++|.+++++||++||.+|..+++||.+|..+|++++|+.+|++|++|++
T Consensus 334 ~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~ 413 (433)
T 3qww_A 334 DSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAIME 413 (433)
T ss_dssp TTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred hhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCchHHHHHHHHHH
Q 014710 388 ITHGTNSPFMKELILKLEE 406 (420)
Q Consensus 388 ~~~G~~h~~~~~~~~~l~~ 406 (420)
.++|++||.+++++.+|++
T Consensus 414 ~~lG~~Hp~~~~l~~~l~~ 432 (433)
T 3qww_A 414 VAHGKDHPYISEIKQEIES 432 (433)
T ss_dssp HHTCTTCHHHHHHHHHHHC
T ss_pred HHcCCCChHHHHHHHHHhc
Confidence 9999999999999988763
No 3
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=100.00 E-value=6.7e-70 Score=538.85 Aligned_cols=388 Identities=26% Similarity=0.435 Sum_probs=325.2
Q ss_pred CCCCCCCeeEeeCCceeccCCCCCCccCccccCC-CCCcCCCCCCcccccChhhchhhhhhhHhhchhhhhchhhhccCC
Q 014710 3 SFHVSGEVIISQEPYVCVPNNSSSISRCDGCFAS-SNLKKCSACQVVWYCGSNCQKLDWKLHRLECQVLSRLDKEKRKSV 81 (420)
Q Consensus 3 ~~i~~Ge~il~e~p~~~~~~~~~~~~~C~~C~~~-~~~~~C~~C~~~~yCs~~C~~~~~~~H~~EC~~~~~~~~~~~~~~ 81 (420)
++|++||+|+.|+|+++++.......+|.+|++. .++.+|++|++++|||++||+.+|+.|+.||+.++.+.+ ..+
T Consensus 23 r~i~~Ge~Il~e~P~~~~~~~~~~~~~C~~C~~~~~~~~~C~~C~~~~yCs~~Cq~~~w~~Hk~eC~~~~~~~~---~~~ 99 (429)
T 3qwp_A 23 TPLRPGELLFRSDPLAYTVCKGSRGVVCDRCLLGKEKLMRCSQCRVAKYCSAKCQKKAWPDHKRECKCLKSCKP---RYP 99 (429)
T ss_dssp SCBCTTCEEEEECCSEEEECGGGBTTBCTTTCCBCSSCEECTTTSCCEESSHHHHHHTHHHHHHHHHHHHHTTT---CCC
T ss_pred CCCCCCCEEEecCCceeeeccccCCCcCcCCCCcCCCCCcCCCCCCcccCChhhhhhhhhhhHHhhhhHHhcCc---cCC
Confidence 6899999999999999999987889999999997 468999999999999999999999999999999988753 245
Q ss_pred CHHHHHHHHHHHHHHhcCCCCCCCCCCCchhhHHHHhhccCCCCHHHHHHHHHHHHHHHHHhcCC------CCCHHHHHH
Q 014710 82 TPSIRLMLKLYLRRKLQNDNVIPSTTTDNYSLVEALVAHMSDIDEKQLLLYAQIANLVNLILQWP------EISINEIAE 155 (420)
Q Consensus 82 ~~~~~l~~r~l~~~~~~~~~~~~~~~~~~~~~~~~L~~h~~~~~~~~~~~~~~~~~~~~~l~~~~------~~~~~~i~~ 155 (420)
...+++++|++++..... + +..+.|..+..|++|.++++.++...+..+...+..++... ..+.+++++
T Consensus 100 ~~~~rl~~rill~~~~~~----~-~~~~~~~~~~~L~sh~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 174 (429)
T 3qwp_A 100 PDSVRLLGRVVFKLMDGA----P-SESEKLYSFYDLESNINKLTEDRKEGLRQLVMTFQHFMREEIQDASQLPPAFDLFE 174 (429)
T ss_dssp CHHHHHHHHHHHHHHHSC----C-CGGGSSSCGGGCCCCGGGCCHHHHHHHHHHHHHHHHHTTTTCCSGGGSCTTCCHHH
T ss_pred ChHHHHHHHHHHHHhcCC----C-CchhhhhhHHHHhhChhhcChhHHHHHHHHHHHHHHHHhhhcCccccCCCHHHHHH
Confidence 577899999988754311 1 22345667889999999988765544444443344444321 234568999
Q ss_pred HHHHhhhcccccccCCCcccccchhhhccccCCCCcCCceeEEeCCEEEEEEecCCCCCCccCCCh--------HhHHHH
Q 014710 156 NFSKLACNAHTICNSELRPLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHVPKGAEGQFDD--------IQESAI 227 (420)
Q Consensus 156 ~~~~~~~N~~~i~~~~~~~~g~glyp~~s~~NHSC~PN~~~~f~~~~~~vra~r~I~~Gee~~~~~--------~~~~~l 227 (420)
+++++.+|+|+|.+.+...+|.||||.+|+|||||.||+.+.|+|++++|+|+|||++||||+++| .|+..|
T Consensus 175 ~~~~~~~N~f~i~~~~~~~~g~~l~~~~s~~NHsC~PN~~~~~~~~~~~~~a~r~I~~GeEl~isY~~~~~~~~~R~~~L 254 (429)
T 3qwp_A 175 AFAKVICNSFTICNAEMQEVGVGLYPSISLLNHSCDPNCSIVFNGPHLLLRAVRDIEVGEELTICYLDMLMTSEERRKQL 254 (429)
T ss_dssp HHHHHHHHCEEEECTTSCEEEEEECTTGGGCEECSSCSEEEEEETTEEEEEECSCBCTTCEEEECCSCSSCCHHHHHHHH
T ss_pred HHHHHHhcCccccccccccceEEEchhhHhhCcCCCCCeEEEEeCCEEEEEEeeeECCCCEEEEEecCCCCCHHHHHHHH
Confidence 999999999999988888899999999999999999999999999999999999999999986433 367777
Q ss_pred hc--CccccCCCCCCCcccCCCCCccccCCCCCccCHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHhhhh
Q 014710 228 LE--GYRCKDDGCSGFLLRDSDDKGFTCQQCGLVRSKEEIKKIASEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKL 305 (420)
Q Consensus 228 ~~--~~~C~c~~C~~~~~~~~~~~~~~C~~C~~~~~~~~~~~~~~~~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~ 305 (420)
.+ +|.|.|++|..+.... ..- ..+.. ....++.+......+..+|++++|++++++++.+++++
T Consensus 255 ~~~~~F~C~C~~C~~~~~~~-----~~~-----~~~~~----~~~~~~~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~ 320 (429)
T 3qwp_A 255 RDQYCFECDCFRCQTQDKDA-----DML-----TGDEQ----VWKEVQESLKKIEELKAHWKWEQVLAMCQAIISSNSER 320 (429)
T ss_dssp HHHHCCCCCSHHHHHTTTHH-----HHT-----CSCHH----HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCC
T ss_pred hccCCeEeeCCCCCCCcccc-----ccc-----ccchh----hhHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhccCc
Confidence 64 7999999998532110 000 00111 11223344455566677899999999999999999999
Q ss_pred cCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHH
Q 014710 306 YHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 385 (420)
Q Consensus 306 l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i 385 (420)
||++|+.++.++++|+.+|..+|+|++|+.+++++|.+++++||++||.+|..+++||.+|..+|++++|+.+|++|++|
T Consensus 321 lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i 400 (429)
T 3qwp_A 321 LPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDI 400 (429)
T ss_dssp CCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCchHHHHHHHHHHHHHHHh
Q 014710 386 LRITHGTNSPFMKELILKLEEAQAEAS 412 (420)
Q Consensus 386 ~~~~~G~~h~~~~~~~~~l~~~~~~~~ 412 (420)
++.++|++||.+.+++.+|++++.||.
T Consensus 401 ~~~~lG~~Hp~~~~~~~~l~~~~~e~~ 427 (429)
T 3qwp_A 401 MRVTHGREHSLIEDLILLLEECDANIR 427 (429)
T ss_dssp HHHHTCTTSHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCChHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999986
No 4
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.46 E-value=5e-13 Score=133.66 Aligned_cols=112 Identities=13% Similarity=-0.071 Sum_probs=105.6
Q ss_pred HHHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCC
Q 014710 273 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 352 (420)
Q Consensus 273 ~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~h 352 (420)
.++...|..+..+|++++|+.++++++.++++++|++||.++.++++||.+|..+|++++|..++++++.++++++|++|
T Consensus 352 ~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~H 431 (490)
T 3n71_A 352 RLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSH 431 (490)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTS
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCC
Confidence 44445666778899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhhHHHHhhcChHHHHHHHHHHHH
Q 014710 353 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVE 384 (420)
Q Consensus 353 p~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~ 384 (420)
|.++..+..|+.++.+++.+++|+.+|++|.+
T Consensus 432 p~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~ 463 (490)
T 3n71_A 432 PITKDLEAMRMQTEMELRMFRQNEFMYHKMRE 463 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999854
No 5
>2odd_A Protein CBFA2T1; MYND zinc finger, cross-braced topology, poly-proline, proline-tryptophan interaction, metal binding protein; NMR {Homo sapiens}
Probab=99.40 E-value=6.1e-14 Score=99.25 Aligned_cols=59 Identities=32% Similarity=0.619 Sum_probs=41.1
Q ss_pred CCCCCCCeeEeeCCceeccCCCCCCccCccccCCCCCcCCCCCCcccccChhhchhhhhhhHhhchhhh
Q 014710 3 SFHVSGEVIISQEPYVCVPNNSSSISRCDGCFASSNLKKCSACQVVWYCGSNCQKLDWKLHRLECQVLS 71 (420)
Q Consensus 3 ~~i~~Ge~il~e~p~~~~~~~~~~~~~C~~C~~~~~~~~C~~C~~~~yCs~~C~~~~~~~H~~EC~~~~ 71 (420)
.+|++||+||.+.| ....|..|++. .+.+|++|+.++|||++||..+|+.|+.+|..+.
T Consensus 2 ~~~~~G~~il~~~~---------~~~~C~~C~~~-~~~~Cs~C~~~~YCs~~CQ~~~W~~Hk~~C~~~~ 60 (64)
T 2odd_A 2 NLYFQGENLYFQGD---------SSESCWNCGRK-ASETCSGCNTARYCGSFCQHKDWEKHHHICGQTL 60 (64)
T ss_dssp -------------C---------CSSSCTTTSSC-CCEEETTTSCCEESSHHHHHHHHHHHTTTTTSSC
T ss_pred CcCCCCCEEeeCCC---------CCCcCccccCC-CcccCCCCCChhhCCHHHHHHHHHHHhHHHhccc
Confidence 47999999999998 25789999984 6889999999999999999999999999998653
No 6
>3rq4_A Histone-lysine N-methyltransferase SUV420H2; suppressor, variegation 4-20 homolog 2, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.80A {Homo sapiens}
Probab=99.35 E-value=7.8e-14 Score=125.10 Aligned_cols=79 Identities=24% Similarity=0.292 Sum_probs=60.4
Q ss_pred hhcccccccCCCcccccchhhh-ccccCCCCcCCceeEEe-CCEEEEEEecCCCCCCccCCChHhHHHHhcCccccCCCC
Q 014710 161 ACNAHTICNSELRPLGTGLYPV-ISIINHSCLPNAVLVFE-GRLAVVRAVQHVPKGAEGQFDDIQESAILEGYRCKDDGC 238 (420)
Q Consensus 161 ~~N~~~i~~~~~~~~g~glyp~-~s~~NHSC~PN~~~~f~-~~~~~vra~r~I~~Gee~~~~~~~~~~l~~~~~C~c~~C 238 (420)
..|.|.|..+. .....++|+. ++++||||.||+.+.+. ++++.|+|+|||++||||+++|...-.-..+|.|.|.+|
T Consensus 155 ~~n~f~i~~~~-~~~~~~l~~~~ar~iNHSC~PN~~~~~~~~~~i~v~A~rdI~~GEElt~~Y~~~~~~~~~f~C~C~~C 233 (247)
T 3rq4_A 155 GENDFSIMYST-RKRSAQLWLGPAAFINHDCKPNCKFVPADGNAACVKVLRDIEPGDEVTCFYGEGFFGEKNEHCECHTC 233 (247)
T ss_dssp TTSCTTEEEET-TTTEEEEEESGGGGCEECSSCSEEEEEETTTEEEEEESSCBCTTCBCEECCCTTSSSGGGTTCCCHHH
T ss_pred cCCcEEEEecC-CcccceeecchhhhcCCCCCCCEEEEEeCCCEEEEEECCcCCCCCEEEEecCchhcCCCCCEEECCCC
Confidence 46888776442 3457889887 88999999999988865 679999999999999999866542211113689999999
Q ss_pred CC
Q 014710 239 SG 240 (420)
Q Consensus 239 ~~ 240 (420)
..
T Consensus 234 ~~ 235 (247)
T 3rq4_A 234 ER 235 (247)
T ss_dssp HH
T ss_pred CC
Confidence 63
No 7
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.33 E-value=6.6e-11 Score=108.01 Aligned_cols=139 Identities=17% Similarity=0.180 Sum_probs=127.8
Q ss_pred HHHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCC
Q 014710 273 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 352 (420)
Q Consensus 273 ~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~h 352 (420)
......+..+...|++++|+..+++++...++.+++.++....++..++.++...|++++|+.++++++..++..+++++
T Consensus 44 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 123 (283)
T 3edt_B 44 TMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFH 123 (283)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCC
Confidence 33445566677889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHH
Q 014710 353 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEA 411 (420)
Q Consensus 353 p~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~~~~~~~l~~~~~~~ 411 (420)
|..+..+..+|.++..+|++++|+.++++|+++.+...|+++|....+...++.+....
T Consensus 124 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~ 182 (283)
T 3edt_B 124 PDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQ 182 (283)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999888888888775443
No 8
>3s8p_A Histone-lysine N-methyltransferase SUV420H1; SET domain, histone methyltransferase, transcription regulat histone lysine, SAM, methylation, nucleus; HET: MSE SAM; 1.85A {Homo sapiens}
Probab=99.26 E-value=5e-13 Score=121.03 Aligned_cols=81 Identities=22% Similarity=0.231 Sum_probs=57.1
Q ss_pred HhhhcccccccCCCcccccchhhhccccCCCCcCCceeEEeCC-EEEEEEecCCCCCCccCCChHhHHHHhcCccccCCC
Q 014710 159 KLACNAHTICNSELRPLGTGLYPVISIINHSCLPNAVLVFEGR-LAVVRAVQHVPKGAEGQFDDIQESAILEGYRCKDDG 237 (420)
Q Consensus 159 ~~~~N~~~i~~~~~~~~g~glyp~~s~~NHSC~PN~~~~f~~~-~~~vra~r~I~~Gee~~~~~~~~~~l~~~~~C~c~~ 237 (420)
....|.|.|........+......++++||||.||+.+.++|. ++.++|+|||++||||+++|.....-..+|.|.|.+
T Consensus 182 ~~~~~dF~i~~s~~~~~a~~~g~~arfiNHSC~PN~~~~~~~~~~i~i~A~RdI~~GEELt~~Y~~~~~~~~~f~C~C~~ 261 (273)
T 3s8p_A 182 RHGENDFSVMYSTRKNCAQLWLGPAAFINHDCRPNCKFVSTGRDTACVKALRDIEPGEEISCYYGDGFFGENNEFCECYT 261 (273)
T ss_dssp CTTTSCTTEEEETTTTEEEEEESGGGGCEECSSCSEEEEEEETTEEEEEESSCBCTTCBCEECCCTTTTSGGGTTCCCHH
T ss_pred hhcccccceeccccccccceecchHHhhCCCCCCCeEEEEcCCCEEEEEECceeCCCCEEEEecCchhcCCCCeEEECCC
Confidence 3456777775433222233333457899999999999998765 899999999999999986654221111368899988
Q ss_pred CC
Q 014710 238 CS 239 (420)
Q Consensus 238 C~ 239 (420)
|.
T Consensus 262 c~ 263 (273)
T 3s8p_A 262 CE 263 (273)
T ss_dssp HH
T ss_pred Cc
Confidence 75
No 9
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.24 E-value=1.2e-10 Score=106.21 Aligned_cols=128 Identities=14% Similarity=0.041 Sum_probs=120.1
Q ss_pred hhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHH
Q 014710 282 LTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYT 361 (420)
Q Consensus 282 ~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~ 361 (420)
....|++++|+..+++++....+.+++.++....++..++.++...|++++|+.++++++...+..+|+++|..+..+..
T Consensus 11 ~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~ 90 (283)
T 3edt_B 11 SSGLVPRGSAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNN 90 (283)
T ss_dssp --CCSCSSSHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHH
Confidence 34578899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHH
Q 014710 362 CGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQA 409 (420)
Q Consensus 362 La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~~~~~~~l~~~~~ 409 (420)
+|.++...|++++|+.++++|+++.+...|+++|....+...++.+..
T Consensus 91 l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~ 138 (283)
T 3edt_B 91 LAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQ 138 (283)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999888888887754
No 10
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=99.19 E-value=5.1e-11 Score=117.26 Aligned_cols=84 Identities=17% Similarity=0.144 Sum_probs=80.7
Q ss_pred HhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHH
Q 014710 326 ELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLE 405 (420)
Q Consensus 326 ~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~~~~~~~l~ 405 (420)
..|+|++|+.+++++|.+.++++|++||.++..+.+||.+|..+|++++|+.++++|++|.+..+|++||.+...+.+|+
T Consensus 310 ~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa 389 (433)
T 3qww_A 310 HYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLG 389 (433)
T ss_dssp TTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHH
T ss_pred hccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHH
Confidence 45899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHH
Q 014710 406 EAQA 409 (420)
Q Consensus 406 ~~~~ 409 (420)
.+..
T Consensus 390 ~~~~ 393 (433)
T 3qww_A 390 RLYM 393 (433)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8844
No 11
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.17 E-value=1.2e-09 Score=101.28 Aligned_cols=136 Identities=15% Similarity=0.139 Sum_probs=125.1
Q ss_pred HHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHH
Q 014710 276 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL 355 (420)
Q Consensus 276 ~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~ 355 (420)
...+..+...|++++|+..+++++...++.+++.++....++..++.++...|++++|+.++++++...+..+|+.+|..
T Consensus 73 ~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~ 152 (311)
T 3nf1_A 73 NILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDV 152 (311)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHH
Confidence 34455567789999999999999999988889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHH
Q 014710 356 GLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEA 411 (420)
Q Consensus 356 ~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~~~~~~~l~~~~~~~ 411 (420)
+..+..+|.++...|++++|+.++++++++.+...|+++|....+...++.+....
T Consensus 153 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~ 208 (311)
T 3nf1_A 153 AKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQ 208 (311)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999888888887775443
No 12
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.17 E-value=1.4e-09 Score=100.79 Aligned_cols=135 Identities=15% Similarity=0.091 Sum_probs=124.0
Q ss_pred HHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChH
Q 014710 275 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 354 (420)
Q Consensus 275 l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~ 354 (420)
+...+..+...|++++|+..+++++.+..+..++.++....++..++.++...|++++|+.++++++...+..+|.++|.
T Consensus 30 ~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 109 (311)
T 3nf1_A 30 LHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPA 109 (311)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChH
Confidence 34445556778999999999999999988888888999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHH
Q 014710 355 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQA 409 (420)
Q Consensus 355 ~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~~~~~~~l~~~~~ 409 (420)
.+..+..+|.++...|++++|+.++++++++.+..+|+++|....+...++.+..
T Consensus 110 ~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~ 164 (311)
T 3nf1_A 110 VAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQ 164 (311)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998888888877644
No 13
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=99.15 E-value=2.1e-10 Score=112.96 Aligned_cols=97 Identities=10% Similarity=-0.027 Sum_probs=89.2
Q ss_pred HHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCCh
Q 014710 274 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 353 (420)
Q Consensus 274 ~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp 353 (420)
++...+..+..+|+|++|+.++++++.++++++|++||.++.++++|+.+|..+|++++|+.++++++.+++..+|++||
T Consensus 331 ~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp 410 (429)
T 3qwp_A 331 VLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHS 410 (429)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSH
T ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCCh
Confidence 34445566677899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhHHHHhhc
Q 014710 354 LLGLQYYTCGKLEWFLG 370 (420)
Q Consensus 354 ~~~~~l~~La~~~~~~g 370 (420)
.++..+.+|+.+..+++
T Consensus 411 ~~~~~~~~l~~~~~e~~ 427 (429)
T 3qwp_A 411 LIEDLILLLEECDANIR 427 (429)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999876543
No 14
>1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A*
Probab=99.10 E-value=2e-11 Score=98.08 Aligned_cols=47 Identities=19% Similarity=0.125 Sum_probs=42.1
Q ss_pred cccchhhhccccCCCCcCCceeEEe--CCEEEEEEecCCCCCCccCCCh
Q 014710 175 LGTGLYPVISIINHSCLPNAVLVFE--GRLAVVRAVQHVPKGAEGQFDD 221 (420)
Q Consensus 175 ~g~glyp~~s~~NHSC~PN~~~~f~--~~~~~vra~r~I~~Gee~~~~~ 221 (420)
.+..+++.++++||||.|||...++ +.++.++|+|||++|||++++|
T Consensus 57 d~~~~~~~~~~~NHsc~pN~~~~~~~~~~~~~~~A~rdI~~GeElt~~Y 105 (119)
T 1n3j_A 57 MSAMALGFGAIFNHSKDPNARHELTAGLKRMRIFTIKPIAIGEEITISY 105 (119)
T ss_dssp EEEEESSSHHHHHSCSSCCCEEEECSSSSCEEEEECSCBCSSEEECCCC
T ss_pred ccccccCceeeeccCCCCCeeEEEECCCeEEEEEEccccCCCCEEEEec
Confidence 4677889999999999999999997 4589999999999999998765
No 15
>2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A*
Probab=98.98 E-value=2.6e-10 Score=98.88 Aligned_cols=61 Identities=28% Similarity=0.461 Sum_probs=44.1
Q ss_pred hccccCCCCcCCceeEE---eC-CEEEEEEecCCCCCCccCCChHhHH-HHhcCccccC--CCCCCCc
Q 014710 182 VISIINHSCLPNAVLVF---EG-RLAVVRAVQHVPKGAEGQFDDIQES-AILEGYRCKD--DGCSGFL 242 (420)
Q Consensus 182 ~~s~~NHSC~PN~~~~f---~~-~~~~vra~r~I~~Gee~~~~~~~~~-~l~~~~~C~c--~~C~~~~ 242 (420)
.+.++||||.||+...+ +| .++.++|+|+|++||||+++|.... .....|.|.| +.|.|.+
T Consensus 124 ~arfiNHSC~PN~~~~~~~~~g~~~i~i~A~rdI~~GEELt~dY~~~~~~~~~~~~C~Cgs~~Crg~l 191 (192)
T 2w5y_A 124 AARFINHSCEPNCYSRVINIDGQKHIVIFAMRKIYRGEELTYDYKFPIEDASNKLPCNCGAKKCRKFL 191 (192)
T ss_dssp GGGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCEEEECCCC-------CCBCCCCCTTCCSBC
T ss_pred hhHhhccCCCCCEEEEEEEECCcEEEEEEECcccCCCCEEEEEcCCchhcCCCCceeECCCCCCcCcC
Confidence 46789999999999763 33 3789999999999999987654211 1224788988 5787764
No 16
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=98.94 E-value=2.8e-08 Score=80.36 Aligned_cols=101 Identities=12% Similarity=0.117 Sum_probs=87.2
Q ss_pred HHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHH
Q 014710 276 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL 355 (420)
Q Consensus 276 ~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~ 355 (420)
.+.+..++.+|++++|++.|++++.+ .|.+ ..++.+++.+|..+|++++|++.+++++.+... .+..++.+
T Consensus 12 ~~lG~~~~~~~~~~~A~~~y~~Al~~-----~p~~---~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~~ 82 (127)
T 4gcn_A 12 KDLGNAAYKQKDFEKAHVHYDKAIEL-----DPSN---ITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRE-TRADYKLI 82 (127)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-TTCCHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCC---HHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcc-cchhhHHH
Confidence 34456678899999999999999875 3444 557889999999999999999999999988654 45678899
Q ss_pred HHHHHHhhHHHHhhcChHHHHHHHHHHHHH
Q 014710 356 GLQYYTCGKLEWFLGDTENAIKSMTEAVEI 385 (420)
Q Consensus 356 ~~~l~~La~~~~~~g~~~eA~~~l~~A~~i 385 (420)
+..++++|.++..+|++++|+.+|++|+.+
T Consensus 83 a~~~~~lg~~~~~~~~~~~A~~~~~kal~~ 112 (127)
T 4gcn_A 83 AKAMSRAGNAFQKQNDLSLAVQWFHRSLSE 112 (127)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 999999999999999999999999999874
No 17
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.92 E-value=3e-08 Score=79.49 Aligned_cols=121 Identities=11% Similarity=0.020 Sum_probs=101.1
Q ss_pred HHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHH
Q 014710 276 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL 355 (420)
Q Consensus 276 ~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~ 355 (420)
+..+......|++++|++.+++++.. .|.++....++..++.++...|++++|+.++++++.. .+.++..
T Consensus 6 ~~~a~~~~~~~~~~~A~~~~~~~~~~-----~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~-----~p~~~~~ 75 (129)
T 2xev_A 6 YNVAFDALKNGKYDDASQLFLSFLEL-----YPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSR-----YPTHDKA 75 (129)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH-----CSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTSTTH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHH-----CCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHH-----CCCCccc
Confidence 44566677789999999999998764 4788888888999999999999999999999998765 3667777
Q ss_pred HHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHH
Q 014710 356 GLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEA 411 (420)
Q Consensus 356 ~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~~~~~~~l~~~~~~~ 411 (420)
...++.+|.++..+|++++|+.++++++... |+++........+..+...+
T Consensus 76 ~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~-----p~~~~~~~a~~~l~~l~~~~ 126 (129)
T 2xev_A 76 AGGLLKLGLSQYGEGKNTEAQQTLQQVATQY-----PGSDAARVAQERLQSIRLGQ 126 (129)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-----TTSHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC-----CCChHHHHHHHHHHHHHhhh
Confidence 8899999999999999999999999998753 78888888888887775543
No 18
>2dj8_A Protein CBFA2T1; zinc finger MYND domain, protein MTG8, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.85.1.1
Probab=98.88 E-value=8.3e-10 Score=76.61 Aligned_cols=45 Identities=38% Similarity=0.761 Sum_probs=40.8
Q ss_pred CCccCccccCCCCCcCCCCCCcccccChhhchhhhhhhHhhchhhh
Q 014710 26 SISRCDGCFASSNLKKCSACQVVWYCGSNCQKLDWKLHRLECQVLS 71 (420)
Q Consensus 26 ~~~~C~~C~~~~~~~~C~~C~~~~yCs~~C~~~~~~~H~~EC~~~~ 71 (420)
....|..|++. .+.+|.+|+.++|||++||..+|+.|+.||..+.
T Consensus 14 ~~~~C~~C~~~-~~~~Cs~C~~v~YCs~~CQ~~~W~~Hk~~C~~~~ 58 (60)
T 2dj8_A 14 SSESCWNCGRK-ASETCSGCNTARYCGSFCQHKDWEKHHHICSGPS 58 (60)
T ss_dssp CSCCCSSSCSC-CCEECTTTSCCEESSHHHHHHTHHHHTTTSCCSS
T ss_pred CCcccccCCCC-CcccCCCCCCEeeeCHHHHHHHHHHHHHHHHhcc
Confidence 46899999984 6889999999999999999999999999998764
No 19
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=98.88 E-value=6.3e-08 Score=78.19 Aligned_cols=105 Identities=14% Similarity=0.130 Sum_probs=87.1
Q ss_pred HHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCCh
Q 014710 274 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 353 (420)
Q Consensus 274 ~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp 353 (420)
.....+..++.+|++++|++.|++++.+ .|.+ ..++.+++.++..+|++++|+..+++++.+ .|
T Consensus 15 ~~~~~G~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~~~~~~~~~~~~~~~~~~A~~~~~~al~~--------~p 78 (126)
T 4gco_A 15 EEKNKGNEYFKKGDYPTAMRHYNEAVKR-----DPEN---AILYSNRAACLTKLMEFQRALDDCDTCIRL--------DS 78 (126)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCC---HHHHHHHhhHHHhhccHHHHHHHHHHHHHh--------hh
Confidence 3345567778899999999999999875 3444 467788999999999999999999999876 45
Q ss_pred HHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchHHH
Q 014710 354 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKE 399 (420)
Q Consensus 354 ~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~~~ 399 (420)
.....++.+|.++..+|++++|+..|++|+++ -|+++....
T Consensus 79 ~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~l-----~P~~~~a~~ 119 (126)
T 4gco_A 79 KFIKGYIRKAACLVAMREWSKAQRAYEDALQV-----DPSNEEARE 119 (126)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCHHHHH
T ss_pred hhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHH-----CcCCHHHHH
Confidence 55678999999999999999999999999986 566765544
No 20
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=98.87 E-value=5.2e-08 Score=81.90 Aligned_cols=108 Identities=12% Similarity=0.065 Sum_probs=91.0
Q ss_pred HHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhc---CCC-------ChhHHHHHHHHHHHHHHhhcHHHHHHHHHH
Q 014710 270 SEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLY---HPF-------SVNLMQTREKLIKILMELEDWKEALAYCQL 339 (420)
Q Consensus 270 ~~~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l---~~~-------h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~ 339 (420)
+.+..+...+..++..|++++|+..|++++....... .|. ++....++.+++.++...|+|++|+.++.+
T Consensus 9 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~ 88 (162)
T 3rkv_A 9 KSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSE 88 (162)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 3456666778888889999999999999998754332 222 455677899999999999999999999999
Q ss_pred hHHHHHHhcCCCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHH
Q 014710 340 TIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 385 (420)
Q Consensus 340 ~l~~~~~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i 385 (420)
++.+ .|.-...++.+|.++..+|++++|+..|++|+.+
T Consensus 89 al~~--------~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l 126 (162)
T 3rkv_A 89 VLKR--------EETNEKALFRRAKARIAAWKLDEAEEDLKLLLRN 126 (162)
T ss_dssp HHHH--------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHhc--------CCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhc
Confidence 9887 4566779999999999999999999999999987
No 21
>2jw6_A Deformed epidermal autoregulatory factor 1 homolo; zinc binding domain, transcription, alternative splicing, DI mutation, DNA-binding; NMR {Homo sapiens} SCOP: g.85.1.1
Probab=98.82 E-value=1.2e-09 Score=73.55 Aligned_cols=46 Identities=30% Similarity=0.746 Sum_probs=37.4
Q ss_pred CCCCCccCccccCCCCCcCCCCCCcccccChhhchhhhhhhHhhchh
Q 014710 23 NSSSISRCDGCFASSNLKKCSACQVVWYCGSNCQKLDWKLHRLECQV 69 (420)
Q Consensus 23 ~~~~~~~C~~C~~~~~~~~C~~C~~~~yCs~~C~~~~~~~H~~EC~~ 69 (420)
+......|..|++. .+.+|++|+.++|||++||..+|+.|+.+|..
T Consensus 5 ~~~~~~~C~~C~~~-~~~~C~~C~~~~YCs~~CQ~~~W~~Hk~~C~~ 50 (52)
T 2jw6_A 5 AERKEQSCVNCGRE-AMSECTGCHKVNYCSTFCQRKDWKDHQHICGQ 50 (52)
T ss_dssp ------CCSSSSSS-CSEECTTTCSSEESSHHHHHHHTTTGGGTTTC
T ss_pred ccccCCcCCCCCCC-CcCcCCCCCCEeecCHHHHHHHHHHHCHHHcc
Confidence 34457899999986 68999999999999999999999999999973
No 22
>3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens}
Probab=98.82 E-value=1.1e-09 Score=98.12 Aligned_cols=61 Identities=28% Similarity=0.349 Sum_probs=44.1
Q ss_pred hccccCCCCcCCceeEE--eC--CEEEEEEecCCCCCCccCCChHhHHHHhcCccccC--CCCCCCc
Q 014710 182 VISIINHSCLPNAVLVF--EG--RLAVVRAVQHVPKGAEGQFDDIQESAILEGYRCKD--DGCSGFL 242 (420)
Q Consensus 182 ~~s~~NHSC~PN~~~~f--~~--~~~~vra~r~I~~Gee~~~~~~~~~~l~~~~~C~c--~~C~~~~ 242 (420)
.+.++||||.||+.+.+ .+ .++.|+|+|+|++|||||++|.....-...|.|.| +.|.|++
T Consensus 165 ~aRfiNHSC~PN~~~~~~~~~~~~~i~~~A~RdI~~GEELT~dY~~~~~~~~~~~C~CGs~~CrG~l 231 (232)
T 3ooi_A 165 YARFMNHCCQPNCETQKWSVNGDTRVGLFALSDIKAGTELTFNYNLECLGNGKTVCKCGAPNCSGFL 231 (232)
T ss_dssp GGGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECCTTCSTTCTTCBCCCCCTTCCSBC
T ss_pred ccccccccCCCCeEEEEEEECCceEEEEEECCccCCCCEEEEECCCCcCCCCCcEeECCCCcCcCcC
Confidence 45688999999998864 33 46889999999999999977642111112588877 4677654
No 23
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=98.80 E-value=2.2e-07 Score=74.34 Aligned_cols=121 Identities=15% Similarity=0.125 Sum_probs=95.6
Q ss_pred HHHHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCC
Q 014710 272 VNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQF 351 (420)
Q Consensus 272 ~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~ 351 (420)
.+.+...+..+...|++++|+..|++++.. .|.+ ..++.+++.++...|++++|+..+++++.+
T Consensus 4 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~-----~p~~---~~~~~~~a~~~~~~~~~~~A~~~~~~al~~-------- 67 (126)
T 3upv_A 4 AEEARLEGKEYFTKSDWPNAVKAYTEMIKR-----APED---ARGYSNRAAALAKLMSFPEAIADCNKAIEK-------- 67 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHh-----CCCC---hHHHHHHHHHHHHhcCHHHHHHHHHHHHHh--------
Confidence 344556677778899999999999999875 3444 467888999999999999999999999876
Q ss_pred ChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHH
Q 014710 352 HPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAE 410 (420)
Q Consensus 352 hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~~~~~~~l~~~~~~ 410 (420)
.|.....++.+|.++..+|++++|+..+++++++-.... +.|....+...+..+...
T Consensus 68 ~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~--~~p~~~~~~~~l~~~~~~ 124 (126)
T 3upv_A 68 DPNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVN--NGSSAREIDQLYYKASQQ 124 (126)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH--TTTTHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhCcccC--CchhHHHHHHHHHHHHHh
Confidence 355567899999999999999999999999999874432 334455566666666544
No 24
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=98.77 E-value=1.3e-07 Score=79.15 Aligned_cols=112 Identities=9% Similarity=0.076 Sum_probs=88.3
Q ss_pred HHHHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCC
Q 014710 272 VNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQF 351 (420)
Q Consensus 272 ~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~ 351 (420)
...+...+..+...|++++|+..|++++.+ .|.+ ..++.+++.++...|++++|+..+++++.+- ++
T Consensus 36 ~~~~~~lg~~~~~~g~~~eA~~~~~~al~~-----~P~~---~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~-----P~ 102 (151)
T 3gyz_A 36 MDDIYSYAYDFYNKGRIEEAEVFFRFLCIY-----DFYN---VDYIMGLAAIYQIKEQFQQAADLYAVAFALG-----KN 102 (151)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-----SS
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHHccHHHHHHHHHHHHhhC-----CC
Confidence 344556667778899999999999999875 3555 4467889999999999999999999998763 33
Q ss_pred ChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHH
Q 014710 352 HPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKL 404 (420)
Q Consensus 352 hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~~~~~~~l 404 (420)
+ ...++++|.++..+|++++|+..|++|+++ .++++........|
T Consensus 103 ~---~~~~~~lg~~~~~lg~~~eA~~~~~~al~l-----~~~~~~~~~A~~ll 147 (151)
T 3gyz_A 103 D---YTPVFHTGQCQLRLKAPLKAKECFELVIQH-----SNDEKLKIKAQSYL 147 (151)
T ss_dssp C---CHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CCCHHHHHHHHHHH
T ss_pred C---cHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCHHHHHHHHHHH
Confidence 4 457899999999999999999999999986 35666444333333
No 25
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=98.76 E-value=1.8e-07 Score=78.29 Aligned_cols=136 Identities=14% Similarity=0.148 Sum_probs=102.7
Q ss_pred HHHHHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCC--CCh--hHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHH
Q 014710 271 EVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHP--FSV--NLMQTREKLIKILMELEDWKEALAYCQLTIPVYQR 346 (420)
Q Consensus 271 ~~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~--~h~--~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~ 346 (420)
+...+...+...+..|++++|+..|.+++.+....-.. .+. ....++.+++.++..+|+|++|+..+.++|.++.+
T Consensus 10 ~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~ 89 (159)
T 2hr2_A 10 GAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNR 89 (159)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhc
Confidence 44555667777888899999999999999875431000 021 23448899999999999999999999999998766
Q ss_pred hcCCCChHHHHHH----HHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHH
Q 014710 347 VYPQFHPLLGLQY----YTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQ 408 (420)
Q Consensus 347 ~~g~~hp~~~~~l----~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~~~~~~~l~~~~ 408 (420)
.. +-.|..+..+ ++.|.++..+|+++||+..|++|+++--.--| --+....+..++++-+
T Consensus 90 ~~-e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~-~~~~~~~~~~~~~~~~ 153 (159)
T 2hr2_A 90 RG-ELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKG-ETPGKERMMEVAIDRI 153 (159)
T ss_dssp HC-CTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCS-CCTTHHHHHHHHHHHH
T ss_pred cc-cCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHH-HHHHHHHHHHHHHHHH
Confidence 64 6677888888 99999999999999999999999999655332 2234444444444433
No 26
>3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens}
Probab=98.75 E-value=3.1e-09 Score=94.73 Aligned_cols=63 Identities=27% Similarity=0.368 Sum_probs=45.1
Q ss_pred hccccCCCCcCCceeEE--eCC--EEEEEEecCCCCCCccCCChHhHH-HHhcCccccCC--CCCCCccc
Q 014710 182 VISIINHSCLPNAVLVF--EGR--LAVVRAVQHVPKGAEGQFDDIQES-AILEGYRCKDD--GCSGFLLR 244 (420)
Q Consensus 182 ~~s~~NHSC~PN~~~~f--~~~--~~~vra~r~I~~Gee~~~~~~~~~-~l~~~~~C~c~--~C~~~~~~ 244 (420)
.+.++||||.||+.+.+ .++ ++.|+|+|+|++||||+++|.... .....|.|.|. .|.|.+..
T Consensus 146 ~aRfiNHSC~PN~~~~~~~~~~~~~i~~~A~RdI~~GEELT~dY~~~~~~~~~~~~C~CGs~~Crg~i~~ 215 (222)
T 3ope_A 146 EARFINHSCDPNCEMQKWSVNGVYRIGLYALKDMPAGTELTYDYNFHSFNVEKQQLCKCGFEKCRGIIGG 215 (222)
T ss_dssp GGGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECTTSSBCCCSCCCBCCCCCTTCCSBCC-
T ss_pred cceeeccCCCCCeEeEEEEECCeEEEEEEECCccCCCCEEEEECCCcccCCcCCCEeeCCCcCCCCccCC
Confidence 35578999999998775 333 789999999999999997764211 11235777764 68887754
No 27
>2d8q_A BLU protein, zinc finger MYND domain containing protein 10; zmynd10, ZF-MYND, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.1 PDB: 2dan_A
Probab=98.74 E-value=8.1e-09 Score=73.64 Aligned_cols=45 Identities=38% Similarity=0.890 Sum_probs=41.0
Q ss_pred CccCccccCCCCCcCCCCCCcccccChhhchhhhhhhHhhchhhhh
Q 014710 27 ISRCDGCFASSNLKKCSACQVVWYCGSNCQKLDWKLHRLECQVLSR 72 (420)
Q Consensus 27 ~~~C~~C~~~~~~~~C~~C~~~~yCs~~C~~~~~~~H~~EC~~~~~ 72 (420)
...|..|.+. .+..|.+|+.++|||++||..+|+.|+.+|..+..
T Consensus 15 ~~~C~~C~~~-~~~~Cs~Ck~v~YCs~eCQ~~~W~~HK~~C~~~~~ 59 (70)
T 2d8q_A 15 RPRCAYCSAE-ASKRCSRCQNEWYCCRECQVKHWEKHGKTCVLAAQ 59 (70)
T ss_dssp CCBCSSSCCB-CCCBCTTTSCCBCSCHHHHHHTHHHHHHHCCCCCC
T ss_pred CCcCCCCCCc-ccccCCCCCCEeeCCHHHhHHHHHHHHHHHHHHHH
Confidence 6799999985 68899999999999999999999999999997754
No 28
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.73 E-value=4.8e-07 Score=74.46 Aligned_cols=130 Identities=15% Similarity=0.082 Sum_probs=104.3
Q ss_pred HHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCCh
Q 014710 274 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 353 (420)
Q Consensus 274 ~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp 353 (420)
.....+..+...|++++|+..+++++...... +.......++..++.++...|++++|+.++++++...+.. .+.+
T Consensus 11 ~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~--~~~~ 86 (164)
T 3ro3_A 11 AFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEF--GDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQL--KDRA 86 (164)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHh--CCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh--CCcH
Confidence 33445555667899999999999998886553 3445567888999999999999999999999999988765 5567
Q ss_pred HHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHH
Q 014710 354 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQA 409 (420)
Q Consensus 354 ~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~~~~~~~l~~~~~ 409 (420)
..+..+..+|.++...|++++|+.++++|+++....- +++........++.+..
T Consensus 87 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~--~~~~~~~~~~~la~~~~ 140 (164)
T 3ro3_A 87 VEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELK--DRIGEGRACWSLGNAYT 140 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcc--chHhHHHHHHHHHHHHH
Confidence 7889999999999999999999999999999987652 34455556666665543
No 29
>2od1_A Protein CBFA2T1; zinc finger, cross-braced topology, metal binding protein; NMR {Homo sapiens}
Probab=98.72 E-value=4.4e-09 Score=72.87 Aligned_cols=45 Identities=36% Similarity=0.741 Sum_probs=40.4
Q ss_pred CCccCccccCCCCCcCCCCCCcccccChhhchhhhhhhHhhchhhh
Q 014710 26 SISRCDGCFASSNLKKCSACQVVWYCGSNCQKLDWKLHRLECQVLS 71 (420)
Q Consensus 26 ~~~~C~~C~~~~~~~~C~~C~~~~yCs~~C~~~~~~~H~~EC~~~~ 71 (420)
....|..|++. .+..|.+|+.++|||++||..+|+.|+.+|..+.
T Consensus 12 ~~~~C~~C~~~-~~~~Cs~C~~v~YCs~~CQ~~dW~~Hk~~C~~~~ 56 (60)
T 2od1_A 12 SSESCWNCGRK-ASETCSGCNTARYCGSFCQHKDWEKHHHICGQTL 56 (60)
T ss_dssp CSSCCTTTSSC-CCEECTTTSCCEESSHHHHHHHHHHHTTTSSCSS
T ss_pred CCCccccCCCc-ccccCCCCCCeeecCHHHHHHHHHHHhHHHcccc
Confidence 46899999984 6889999999999999999999999999998653
No 30
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=98.72 E-value=4e-07 Score=74.70 Aligned_cols=120 Identities=13% Similarity=0.093 Sum_probs=93.4
Q ss_pred HHHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCC
Q 014710 273 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 352 (420)
Q Consensus 273 ~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~h 352 (420)
..+...+..+...|++++|+..+++++.. .|.++ .++..++.++...|++++|+.++++++.+. +.+
T Consensus 19 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-----p~~ 85 (142)
T 2xcb_A 19 EQLYALGFNQYQAGKWDDAQKIFQALCML-----DHYDA---RYFLGLGACRQSLGLYEQALQSYSYGALMD-----INE 85 (142)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----TTC
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHHHHHh-----CCccH---HHHHHHHHHHHHHhhHHHHHHHHHHHHhcC-----CCC
Confidence 34455666677889999999999999764 45554 556789999999999999999999998752 344
Q ss_pred hHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHhc
Q 014710 353 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEASY 413 (420)
Q Consensus 353 p~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~~~~~~~l~~~~~~~~~ 413 (420)
| ..++.+|.++..+|++++|+..|++++++. |++|....+..........+..
T Consensus 86 ~---~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-----p~~~~~~~~~~~~~~~l~~l~~ 138 (142)
T 2xcb_A 86 P---RFPFHAAECHLQLGDLDGAESGFYSARALA-----AAQPAHEALAARAGAMLEAVTA 138 (142)
T ss_dssp T---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-----HTCGGGHHHHHHHHHHHHHHHH
T ss_pred c---HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-----CCCcchHHHHHHHHHHHHHHHh
Confidence 4 467899999999999999999999999875 4667666666666555555543
No 31
>3h6l_A Histone-lysine N-methyltransferase SETD2; SET domain-containing protein 2, S-adenos methionine, structural genomics, structural genomics consor SGC; HET: SAM; 1.99A {Homo sapiens} PDB: 4fmu_A* 4h12_A*
Probab=98.72 E-value=3.6e-09 Score=97.07 Aligned_cols=62 Identities=27% Similarity=0.342 Sum_probs=44.5
Q ss_pred ccccCCCCcCCceeE--EeCC--EEEEEEecCCCCCCccCCChHhHHHHhcCccccC--CCCCCCccc
Q 014710 183 ISIINHSCLPNAVLV--FEGR--LAVVRAVQHVPKGAEGQFDDIQESAILEGYRCKD--DGCSGFLLR 244 (420)
Q Consensus 183 ~s~~NHSC~PN~~~~--f~~~--~~~vra~r~I~~Gee~~~~~~~~~~l~~~~~C~c--~~C~~~~~~ 244 (420)
+.++||||.||+... +.++ ++.|.|+|+|++|||||++|.-...-...|.|.| +.|.|++..
T Consensus 191 aRFiNHSC~PN~~~~~~~v~g~~ri~~fA~RdI~~GEELT~dY~~~~~~~~~~~C~CGs~~Crg~l~~ 258 (278)
T 3h6l_A 191 SRFMNHSCEPNCETQKWTVNGQLRVGFFTTKLVPSGSELTFDYQFQRYGKEAQKCFCGSANCRGYLGG 258 (278)
T ss_dssp GGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECCTTTEECSSCEECCCCCTTCCSEECC
T ss_pred hhhcccCCCCCceeEEEEeCCceEEEEEECCccCCCCEEEEecCCCcCCCCCcEeECCCCCCeeecCC
Confidence 557899999997654 3444 6889999999999999977642111123577877 567777654
No 32
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=98.70 E-value=5.4e-07 Score=74.80 Aligned_cols=120 Identities=11% Similarity=0.084 Sum_probs=92.1
Q ss_pred HHHHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCC
Q 014710 272 VNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQF 351 (420)
Q Consensus 272 ~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~ 351 (420)
.......+..+..+|++++|+..+++++.. .|.++ .++..++.++...|++++|+..+++++.+. +.
T Consensus 21 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~~g~~~~A~~~~~~al~l~-----p~ 87 (148)
T 2vgx_A 21 LEQLYSLAFNQYQSGXYEDAHXVFQALCVL-----DHYDS---RFFLGLGACRQAMGQYDLAIHSYSYGAVMD-----IX 87 (148)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-----TT
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHc-----CcccH---HHHHHHHHHHHHHhhHHHHHHHHHHHHhcC-----CC
Confidence 445556677778899999999999999764 35554 456789999999999999999999998762 33
Q ss_pred ChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHh
Q 014710 352 HPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEAS 412 (420)
Q Consensus 352 hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~~~~~~~l~~~~~~~~ 412 (420)
+ ...++.+|.++..+|++++|+..|++|+++. |++|....+..........+.
T Consensus 88 ~---~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-----p~~~~~~~~~~~~~~~l~~l~ 140 (148)
T 2vgx_A 88 E---PRFPFHAAECLLQXGELAEAESGLFLAQELI-----ANXPEFXELSTRVSSMLEAIK 140 (148)
T ss_dssp C---THHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-----TTCGGGHHHHHHHHHHHHHC-
T ss_pred C---chHHHHHHHHHHHcCCHHHHHHHHHHHHHHC-----cCCCcchHHHHHHHHHHHHHH
Confidence 4 4578999999999999999999999998765 456666555555555444433
No 33
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.68 E-value=3.5e-07 Score=88.09 Aligned_cols=127 Identities=9% Similarity=0.029 Sum_probs=108.0
Q ss_pred HHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHH
Q 014710 278 KTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGL 357 (420)
Q Consensus 278 ~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~ 357 (420)
.+......|++++|+..+++++.+.... ++++....++..++.+|...|++++|+.++++++.+++.. +...+..+.
T Consensus 109 ~g~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~~~~ 185 (383)
T 3ulq_A 109 RGMYELDQREYLSAIKFFKKAESKLIFV--KDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEH-EAYNIRLLQ 185 (383)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTGGGC--CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTC-STTHHHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHhhC--CCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhC-ccchHHHHH
Confidence 5666778899999999999998876553 5566688999999999999999999999999999998776 556889999
Q ss_pred HHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHH
Q 014710 358 QYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQA 409 (420)
Q Consensus 358 ~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~~~~~~~l~~~~~ 409 (420)
.+..||.++..+|++++|+.++++|+++.... .+++....+...++.+..
T Consensus 186 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~lg~~y~ 235 (383)
T 3ulq_A 186 CHSLFATNFLDLKQYEDAISHFQKAYSMAEAE--KQPQLMGRTLYNIGLCKN 235 (383)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHc--CChHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998876 455666666666666643
No 34
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=98.67 E-value=1e-06 Score=73.95 Aligned_cols=99 Identities=12% Similarity=0.098 Sum_probs=83.3
Q ss_pred HHHHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCC
Q 014710 272 VNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQF 351 (420)
Q Consensus 272 ~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~ 351 (420)
...+...+..+...|++++|+..|++++.+. |.+ ..++..++.+|...|++++|+.++++++.+
T Consensus 11 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~-----p~~---~~~~~~l~~~~~~~g~~~~A~~~~~~al~~-------- 74 (164)
T 3sz7_A 11 SDKLKSEGNAAMARKEYSKAIDLYTQALSIA-----PAN---PIYLSNRAAAYSASGQHEKAAEDAELATVV-------- 74 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-----TTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-----CcC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHh--------
Confidence 3444556667778899999999999998752 444 567888999999999999999999999877
Q ss_pred ChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHH
Q 014710 352 HPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEIL 386 (420)
Q Consensus 352 hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~ 386 (420)
+|.....++.+|.++..+|++++|+.+|++++++-
T Consensus 75 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 109 (164)
T 3sz7_A 75 DPKYSKAWSRLGLARFDMADYKGAKEAYEKGIEAE 109 (164)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Confidence 35557789999999999999999999999999865
No 35
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.65 E-value=8.5e-07 Score=85.36 Aligned_cols=130 Identities=12% Similarity=0.183 Sum_probs=107.6
Q ss_pred HHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCCh
Q 014710 274 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 353 (420)
Q Consensus 274 ~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp 353 (420)
.....+......|++++|+..+++++.+..+. +..++....++..++.+|...|++++|++++++++.+.+.. ++++
T Consensus 145 ~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~ 221 (383)
T 3ulq_A 145 FFFKMSESYYYMKQTYFSMDYARQAYEIYKEH-EAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAE--KQPQ 221 (383)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTC-STTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhC-ccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHc--CChH
Confidence 33445556677899999999999999987654 33467788999999999999999999999999999998877 6788
Q ss_pred HHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHH
Q 014710 354 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQ 408 (420)
Q Consensus 354 ~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~~~~~~~l~~~~ 408 (420)
..+..+++||.++..+|++++|+.++++|+++.+..-. .|....+...++.+.
T Consensus 222 ~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~--~~~~~~~~~~l~~~~ 274 (383)
T 3ulq_A 222 LMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNI--LPSLPQAYFLITQIH 274 (383)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC--GGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhcc--chhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999887632 144455556665553
No 36
>3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 4ij8_A* 2bqz_A*
Probab=98.63 E-value=9.4e-09 Score=87.55 Aligned_cols=40 Identities=25% Similarity=0.227 Sum_probs=32.7
Q ss_pred hccccCCCCcCCceeEE--eCC--EEEEEEecCCCCCCccCCCh
Q 014710 182 VISIINHSCLPNAVLVF--EGR--LAVVRAVQHVPKGAEGQFDD 221 (420)
Q Consensus 182 ~~s~~NHSC~PN~~~~f--~~~--~~~vra~r~I~~Gee~~~~~ 221 (420)
.+.++||||.|||.... .++ ++.+.|+|||++|||||++|
T Consensus 107 ~aRfiNHSC~PN~~~~~~~~~~~~~i~~~A~rdI~~GEELt~dY 150 (166)
T 3f9x_A 107 LGRLINHSKCGNCQTKLHDIDGVPHLILIASRDIAAGEELLFDY 150 (166)
T ss_dssp SGGGCEECTTCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECC
T ss_pred hhheeecCCCCCeeEEEEEECCeeEEEEEECCcCCCCCEEEEEc
Confidence 35678999999987763 343 68899999999999998665
No 37
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.61 E-value=1.8e-06 Score=74.45 Aligned_cols=130 Identities=8% Similarity=0.039 Sum_probs=102.1
Q ss_pred HHHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCC
Q 014710 273 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 352 (420)
Q Consensus 273 ~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~h 352 (420)
......+......|++++|+..+++++...+.. ...+....++.+++.++...|++++|+.++++++.+.+ -.|...
T Consensus 27 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~-~~~~~~ 103 (203)
T 3gw4_A 27 GARFMLGYVYAFMDRFDEARASFQALQQQAQKS--GDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLA-SLPEDP 103 (203)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTT--CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HSCCCH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHc--CCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-HcCccH
Confidence 334445556677899999999999999877653 34566788999999999999999999999999999987 445455
Q ss_pred hHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHH
Q 014710 353 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEA 407 (420)
Q Consensus 353 p~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~~~~~~~l~~~ 407 (420)
+..+..+..+|.++..+|++++|+.++++|+++.... | +......++..++.+
T Consensus 104 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~-~-~~~~~~~~~~~la~~ 156 (203)
T 3gw4_A 104 LAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQA-D-DQVAIACAFRGLGDL 156 (203)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT-T-CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhc-c-chHHHHHHHHHHHHH
Confidence 5889999999999999999999999999999987653 2 222233344444444
No 38
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=98.61 E-value=2.1e-06 Score=74.43 Aligned_cols=117 Identities=11% Similarity=0.068 Sum_probs=91.2
Q ss_pred HHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCCh----------hHHHHHHHHHHHHHHhhcHHHHHHHHHH
Q 014710 270 SEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSV----------NLMQTREKLIKILMELEDWKEALAYCQL 339 (420)
Q Consensus 270 ~~~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~----------~~~~~~~~L~~~~~~~g~~~~A~~~~~~ 339 (420)
.....+...+..+..+|++++|+..|++++..... .+... ....++.+++.++...|++++|+.++++
T Consensus 36 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~--~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~ 113 (198)
T 2fbn_A 36 QSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIH--TEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASK 113 (198)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTT--CTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhc--ccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 34555666777888899999999999999875422 11111 1247788999999999999999999999
Q ss_pred hHHHHHHhcCCCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchHHHHH
Q 014710 340 TIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELI 401 (420)
Q Consensus 340 ~l~~~~~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~~~~~ 401 (420)
++.. +|.....++.+|.++..+|++++|+.++++|+.+ .|+++.+...+
T Consensus 114 al~~--------~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~-----~p~~~~~~~~l 162 (198)
T 2fbn_A 114 VLKI--------DKNNVKALYKLGVANMYFGFLEEAKENLYKAASL-----NPNNLDIRNSY 162 (198)
T ss_dssp HHHH--------STTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-----STTCHHHHHHH
T ss_pred HHHh--------CcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHH-----CCCcHHHHHHH
Confidence 9876 3555678999999999999999999999999976 45665554433
No 39
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.60 E-value=3.5e-06 Score=66.65 Aligned_cols=103 Identities=13% Similarity=0.126 Sum_probs=85.9
Q ss_pred HHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCCh
Q 014710 274 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 353 (420)
Q Consensus 274 ~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp 353 (420)
.....+..+...|++++|+..+++++.. .|.+ ..++..++.++...|++++|+.++++++..... .+..++
T Consensus 6 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~-----~~~~---~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~ 76 (131)
T 1elr_A 6 KEKELGNDAYKKKDFDTALKHYDKAKEL-----DPTN---MTYITNQAAVYFEKGDYNKCRELCEKAIEVGRE-NREDYR 76 (131)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH-STTCHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhc-----CCcc---HHHHHHHHHHHHHhccHHHHHHHHHHHHhhccc-cchhHH
Confidence 3445566667789999999999999775 2333 466788999999999999999999999987653 356677
Q ss_pred HHHHHHHHhhHHHHhhcChHHHHHHHHHHHHH
Q 014710 354 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 385 (420)
Q Consensus 354 ~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i 385 (420)
.....++.+|.++...|++++|..++++++.+
T Consensus 77 ~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 108 (131)
T 1elr_A 77 QIAKAYARIGNSYFKEEKYKDAIHFYNKSLAE 108 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 77999999999999999999999999999984
No 40
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.60 E-value=1.7e-06 Score=80.19 Aligned_cols=129 Identities=10% Similarity=0.033 Sum_probs=103.3
Q ss_pred HhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHH
Q 014710 279 TLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQ 358 (420)
Q Consensus 279 a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~ 358 (420)
+......|++++|+..+++++..... .+.....+.++.+++.+|...|++++|+.++++++..++.. +.+++..+..
T Consensus 122 ~~~~~~~~~~~~Ai~~~~~al~~~~~--~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~-~~~~~~~~~~ 198 (293)
T 3u3w_A 122 AAYVLKKVDYEYCILELKKLLNQQLT--GIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEAL-HDNEEFDVKV 198 (293)
T ss_dssp HHHHTTSSCHHHHHHHHHHHHHTCCC--CSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS-SCCHHHHHHH
T ss_pred HHHHHcccCHHHHHHHHHHHHHHhcc--cccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc-ccchhHHHHH
Confidence 33345678999999999999875322 22334467789999999999999999999999999988664 5688999999
Q ss_pred HHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHh
Q 014710 359 YYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEAS 412 (420)
Q Consensus 359 l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~~~~~~~l~~~~~~~~ 412 (420)
++++|.++..+|++++|+.++++|+++.... .+++....+...++.+...+.
T Consensus 199 ~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~--~~~~~~~~~~~~lg~~~~~~g 250 (293)
T 3u3w_A 199 RYNHAKALYLDSRYEESLYQVNKAIEISCRI--NSMALIGQLYYQRGECLRKLE 250 (293)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TBCTTHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHc--CcHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999998765 245555666666666655443
No 41
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=98.59 E-value=2.9e-06 Score=68.30 Aligned_cols=113 Identities=12% Similarity=0.081 Sum_probs=88.1
Q ss_pred HHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCCh
Q 014710 274 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 353 (420)
Q Consensus 274 ~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp 353 (420)
.....+..+...|++++|+..+++++.. .|.+ ..++..++.++...|++++|+.++++++.. +|
T Consensus 11 ~~~~~g~~~~~~~~~~~A~~~~~~al~~-----~~~~---~~~~~~l~~~~~~~~~~~~A~~~~~~al~~--------~p 74 (137)
T 3q49_B 11 ELKEQGNRLFVGRKYPEAAACYGRAITR-----NPLV---AVYYTNRALCYLKMQQPEQALADCRRALEL--------DG 74 (137)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CT
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHhh-----CcCc---HHHHHHHHHHHHHhcCHHHHHHHHHHHHHh--------Cc
Confidence 3445566677889999999999999875 3444 467888999999999999999999999875 24
Q ss_pred HHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchHHHHHH
Q 014710 354 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELIL 402 (420)
Q Consensus 354 ~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~~~~~~ 402 (420)
.....++.+|.++..+|++++|+..+++|+.+-......-.+.+...+.
T Consensus 75 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~l~ 123 (137)
T 3q49_B 75 QSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALR 123 (137)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCTTHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHChhHHHHHHHHHHHHHH
Confidence 4566899999999999999999999999999876632222344443333
No 42
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.59 E-value=1.2e-06 Score=71.46 Aligned_cols=111 Identities=16% Similarity=0.173 Sum_probs=89.1
Q ss_pred HHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChH
Q 014710 275 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 354 (420)
Q Consensus 275 l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~ 354 (420)
....+......|++++|++.+++++.. .|.+.....++..++.++...|++++|+.++++++.. +|.
T Consensus 31 ~~~~a~~~~~~~~~~~A~~~~~~a~~~-----~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~--------~~~ 97 (148)
T 2dba_A 31 LRKEGNELFKCGDYGGALAAYTQALGL-----DATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEK--------DGG 97 (148)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHTS-----CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------TSC
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHH-----cccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhh--------Ccc
Confidence 344556667789999999999998653 4666666888999999999999999999999998875 233
Q ss_pred HHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchHHHHHHH
Q 014710 355 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILK 403 (420)
Q Consensus 355 ~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~~~~~~~ 403 (420)
....++.+|.++..+|++++|+.++++++.+ .|+++.+...+..
T Consensus 98 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~-----~p~~~~~~~~l~~ 141 (148)
T 2dba_A 98 DVKALYRRSQALEKLGRLDQAVLDLQRCVSL-----EPKNKVFQEALRN 141 (148)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-----CSSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc-----CCCcHHHHHHHHH
Confidence 4678899999999999999999999999875 4666655544433
No 43
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.57 E-value=1.4e-06 Score=71.62 Aligned_cols=111 Identities=20% Similarity=0.167 Sum_probs=94.6
Q ss_pred HHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCCh
Q 014710 274 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 353 (420)
Q Consensus 274 ~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp 353 (420)
.....+..+...|++++|++.+++++...... +..+....++..++.++...|++++|++++++++...+.. .+++
T Consensus 51 ~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~--~~~~ 126 (164)
T 3ro3_A 51 AYSNLGNAYIFLGEFETASEYYKKTLLLARQL--KDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQEL--KDRI 126 (164)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh--CCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHc--cchH
Confidence 34445666778899999999999998876553 3445567888999999999999999999999999988765 3568
Q ss_pred HHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHH
Q 014710 354 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRI 388 (420)
Q Consensus 354 ~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~ 388 (420)
..+..+..+|.++...|++++|..++++|+++.+.
T Consensus 127 ~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 127 GEGRACWSLGNAYTALGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999998764
No 44
>3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens}
Probab=98.56 E-value=2.1e-08 Score=92.85 Aligned_cols=62 Identities=21% Similarity=0.355 Sum_probs=45.5
Q ss_pred hccccCCCCcCCceeEE---eC--CEEEEEEecCCCCCCccCCChHhH----------HHH---hcCccccC--CCCCCC
Q 014710 182 VISIINHSCLPNAVLVF---EG--RLAVVRAVQHVPKGAEGQFDDIQE----------SAI---LEGYRCKD--DGCSGF 241 (420)
Q Consensus 182 ~~s~~NHSC~PN~~~~f---~~--~~~~vra~r~I~~Gee~~~~~~~~----------~~l---~~~~~C~c--~~C~~~ 241 (420)
.+.++||||.||+.+.. ++ .++.|+|+|+|++||||+++|... +.+ ...+.|.| +.|.|.
T Consensus 205 ~arfiNHSC~PN~~~~~~~~~~~~~~i~~~A~rdI~~GEELt~dY~~~~~~~~~~~~~~~~~~~~~~~~C~CGs~~CrG~ 284 (290)
T 3bo5_A 205 IGRFLNHSCEPNLLMIPVRIDSMVPKLALFAAKDIVPEEELSYDYSGRYLNLTVSASKERLDHGKLRKPCYCGAKSCTAF 284 (290)
T ss_dssp GGGGCEECSSCSEEEEEEESSSSSCEEEEEESSCBCTTCEEEECTTSCTTCCSSSEEEEEEECSSCCCBCCCCCTTCCSB
T ss_pred chheeeecCCCCEEEEEEEeCCCceEEEEEEccccCCCCEEEEECCCccccccccccccccccCCCCccccCCCcCCCcc
Confidence 45689999999998763 33 489999999999999999776421 011 12477887 578887
Q ss_pred cc
Q 014710 242 LL 243 (420)
Q Consensus 242 ~~ 243 (420)
+.
T Consensus 285 l~ 286 (290)
T 3bo5_A 285 LP 286 (290)
T ss_dssp CC
T ss_pred CC
Confidence 63
No 45
>1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A*
Probab=98.56 E-value=1.9e-08 Score=93.94 Aligned_cols=61 Identities=36% Similarity=0.604 Sum_probs=33.9
Q ss_pred hccccCCCCcCCceeEEe-C-------CEEEEEEecCCCCCCccCCChHhH-----------HHHhcCccccC--CCCCC
Q 014710 182 VISIINHSCLPNAVLVFE-G-------RLAVVRAVQHVPKGAEGQFDDIQE-----------SAILEGYRCKD--DGCSG 240 (420)
Q Consensus 182 ~~s~~NHSC~PN~~~~f~-~-------~~~~vra~r~I~~Gee~~~~~~~~-----------~~l~~~~~C~c--~~C~~ 240 (420)
.+.++||||.||+.+... + .++.++|+|+|++||||+++|... ..+...+.|.| +.|.|
T Consensus 220 ~arfiNHSC~PN~~~~~~~~~~~~~~~~~i~~~A~rdI~~GeELt~dY~~~~~~~~~~~~~~~k~~~~~~C~CGs~~Crg 299 (302)
T 1ml9_A 220 PTRFINHSCDPNMAIFARVGDHADKHIHDLALFAIKDIPKGTELTFDYVNGLTGLESDAHDPSKISEMTKCLCGTAKCRG 299 (302)
T ss_dssp GGGGCEECSSCSEEEEEEESSGGGGGGCEEEEEESSCBCTTCEEEECTTC------------------------------
T ss_pred HHHhcccCCCCCeeEEEEEeccCCCCceEEEEEECCCcCCCCEEEEEECCCccccccccccccccCCCcEeeCCCCcCcc
Confidence 356899999999987542 2 279999999999999999776311 01223477877 46765
Q ss_pred Cc
Q 014710 241 FL 242 (420)
Q Consensus 241 ~~ 242 (420)
.+
T Consensus 300 ~l 301 (302)
T 1ml9_A 300 YL 301 (302)
T ss_dssp --
T ss_pred cc
Confidence 43
No 46
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.56 E-value=2e-06 Score=79.72 Aligned_cols=111 Identities=18% Similarity=0.140 Sum_probs=93.1
Q ss_pred HHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhH-HHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCCh
Q 014710 275 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNL-MQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 353 (420)
Q Consensus 275 l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~-~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp 353 (420)
....+..+...|++++|+..+++++...+.. +.+... ..++.+++.+|...|++++|+.++++++.+... ...+.
T Consensus 158 ~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~--~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~--~~~~~ 233 (293)
T 2qfc_A 158 ENAIANIYAENGYLKKGIDLFEQILKQLEAL--HDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCR--INSMA 233 (293)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH--TTBCS
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc--CccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHh--cCcHH
Confidence 3444556677899999999999999876542 333433 388999999999999999999999999998754 46677
Q ss_pred HHHHHHHHhhHHHHhhcChHHH-HHHHHHHHHHHHHh
Q 014710 354 LLGLQYYTCGKLEWFLGDTENA-IKSMTEAVEILRIT 389 (420)
Q Consensus 354 ~~~~~l~~La~~~~~~g~~~eA-~~~l~~A~~i~~~~ 389 (420)
.++..++++|.++..+|++++| ..++++|+.+.+..
T Consensus 234 ~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~~~~ 270 (293)
T 2qfc_A 234 LIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDIL 270 (293)
T ss_dssp SHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHh
Confidence 8899999999999999999999 88999999998875
No 47
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.56 E-value=1.2e-06 Score=81.33 Aligned_cols=112 Identities=18% Similarity=0.137 Sum_probs=96.2
Q ss_pred HHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChH
Q 014710 275 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 354 (420)
Q Consensus 275 l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~ 354 (420)
....+..+...|++++|+..+++++...+.. +..++....++.+++.+|...|++++|+.++++++.+.... ..++.
T Consensus 158 ~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~--~~~~~ 234 (293)
T 3u3w_A 158 ENAIANIYAENGYLKKGIDLFEQILKQLEAL-HDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRI--NSMAL 234 (293)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TBCTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc-ccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHc--CcHHH
Confidence 3344555677899999999999999876543 34667788899999999999999999999999999988765 56778
Q ss_pred HHHHHHHhhHHHHhhcC-hHHHHHHHHHHHHHHHHh
Q 014710 355 LGLQYYTCGKLEWFLGD-TENAIKSMTEAVEILRIT 389 (420)
Q Consensus 355 ~~~~l~~La~~~~~~g~-~~eA~~~l~~A~~i~~~~ 389 (420)
.+..++.+|.++..+|+ +++|+.++++|+.+.+..
T Consensus 235 ~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~~~~ 270 (293)
T 3u3w_A 235 IGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDIL 270 (293)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHh
Confidence 89999999999999995 699999999999999964
No 48
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=98.56 E-value=1.1e-06 Score=79.69 Aligned_cols=114 Identities=13% Similarity=0.149 Sum_probs=97.9
Q ss_pred HHHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCC
Q 014710 273 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 352 (420)
Q Consensus 273 ~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~h 352 (420)
..++..+..++..|++++|+..+++++. ..|.++....++..++.++...|++++|+.++++++... +.+
T Consensus 16 ~~~~~~a~~~~~~g~~~~A~~~~~~~l~-----~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~-----p~~ 85 (261)
T 3qky_A 16 QEAFERAMEFYNQGKYDRAIEYFKAVFT-----YGRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIY-----QID 85 (261)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHGG-----GCSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----TTC
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHH-----hCCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHC-----CCC
Confidence 4456667777889999999999999865 358888889999999999999999999999999987764 667
Q ss_pred hHHHHHHHHhhHHHHh--------hcChHHHHHHHHHHHHHHHHhcCCCCchHHHHH
Q 014710 353 PLLGLQYYTCGKLEWF--------LGDTENAIKSMTEAVEILRITHGTNSPFMKELI 401 (420)
Q Consensus 353 p~~~~~l~~La~~~~~--------~g~~~eA~~~l~~A~~i~~~~~G~~h~~~~~~~ 401 (420)
|.....++.+|.++.. .|++++|+..++++++. .|+++.....+
T Consensus 86 ~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~-----~p~~~~~~~a~ 137 (261)
T 3qky_A 86 PRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDR-----YPNHELVDDAT 137 (261)
T ss_dssp TTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHH-----CTTCTTHHHHH
T ss_pred chhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHH-----CcCchhHHHHH
Confidence 8888999999999999 99999999999999875 36777776665
No 49
>3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 4h4h_A* 4i51_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A*
Probab=98.55 E-value=6.8e-08 Score=89.14 Aligned_cols=57 Identities=25% Similarity=0.354 Sum_probs=41.0
Q ss_pred ccccCCCCcCCceeE--Ee-C-----CEEEEEEecCCCCCCccCCChHhH--HHHhcCccccC--CCCC
Q 014710 183 ISIINHSCLPNAVLV--FE-G-----RLAVVRAVQHVPKGAEGQFDDIQE--SAILEGYRCKD--DGCS 239 (420)
Q Consensus 183 ~s~~NHSC~PN~~~~--f~-~-----~~~~vra~r~I~~Gee~~~~~~~~--~~l~~~~~C~c--~~C~ 239 (420)
+.++||||.||+... |. + .++.+.|+|+|++||||+++|-.. +.....|.|.| +.|.
T Consensus 217 aRFiNHSC~PN~~~~~v~~~~~d~~~~~i~~~A~RdI~~GEELT~dYg~~~~~~~~~~~~C~CGs~~CR 285 (287)
T 3hna_A 217 SRFINHHCEPNLVPVRVFMAHQDLRFPRIAFFSTRLIEAGEQLGFDYGERFWDIKGKLFSCRCGSPKCR 285 (287)
T ss_dssp GGGCEECSSCSEEEEEEESSCCCTTCCEEEEEESSCBCTTCBCEECCCHHHHHHHTTTCCCCCCCTTCS
T ss_pred hheeeecCCCCceeEEEEEecCCCCceeEEEEEcceeCCCCeEEEeCCCcccccCCCcCEeeCCCCCCC
Confidence 457799999999753 32 1 289999999999999999776432 22234688876 3454
No 50
>2r3a_A Histone-lysine N-methyltransferase SUV39H2; histone H3-K9 methyltransferase 2, H3 lysine-9 specific 2, alternative splicing, cell cycle; HET: SAM; 2.00A {Homo sapiens}
Probab=98.53 E-value=4.8e-08 Score=90.68 Aligned_cols=41 Identities=29% Similarity=0.468 Sum_probs=34.0
Q ss_pred hccccCCCCcCCceeE--E-eC-----CEEEEEEecCCCCCCccCCChH
Q 014710 182 VISIINHSCLPNAVLV--F-EG-----RLAVVRAVQHVPKGAEGQFDDI 222 (420)
Q Consensus 182 ~~s~~NHSC~PN~~~~--f-~~-----~~~~vra~r~I~~Gee~~~~~~ 222 (420)
.+.++||||.||+.+. + ++ .++.+.|+|+|++||||+++|.
T Consensus 215 ~aRfiNHSC~PN~~~~~v~~~~~d~~~~~i~~~A~rdI~~GEELt~dY~ 263 (300)
T 2r3a_A 215 VSHFVNHSCDPNLQVFNVFIDNLDTRLPRIALFSTRTINAGEELTFDYQ 263 (300)
T ss_dssp GGGGCEECSSCSEEEEEEESSCCCTTSCEEEEEESSCBCTTCEEEECGG
T ss_pred hHHheecCCCCCEEEEEEEeccCCCCceEEEEEEccCCCCCCEEEEECC
Confidence 5678999999999875 2 21 4799999999999999997764
No 51
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.53 E-value=2.8e-06 Score=81.64 Aligned_cols=130 Identities=10% Similarity=0.089 Sum_probs=106.1
Q ss_pred HHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCCh
Q 014710 274 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 353 (420)
Q Consensus 274 ~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp 353 (420)
.....+..+...|++++|+..+++++....+. +...+....++..++.++...|++++|++++++++.+.+.. ++.+
T Consensus 143 ~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~--~~~~ 219 (378)
T 3q15_A 143 FHFKVAEAYYHMKQTHVSMYHILQALDIYQNH-PLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDI--QNDR 219 (378)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTS-TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHH
T ss_pred HHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhC-CCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHc--CCHH
Confidence 33445556677899999999999999887543 22244678899999999999999999999999999998776 5566
Q ss_pred HHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHH
Q 014710 354 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQA 409 (420)
Q Consensus 354 ~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~~~~~~~l~~~~~ 409 (420)
..+..+.+||.++..+|++++|+.++++|+++.+.. .+|....++..++.+..
T Consensus 220 ~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~---~~~~~~~~~~~la~~~~ 272 (378)
T 3q15_A 220 FIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREK---VPDLLPKVLFGLSWTLC 272 (378)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH---CGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhh---CChhHHHHHHHHHHHHH
Confidence 889999999999999999999999999999998887 45555666666666543
No 52
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.51 E-value=2.4e-06 Score=82.34 Aligned_cols=124 Identities=13% Similarity=0.153 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHhhhh--------cCCCChhHHHHHHHHHHHHHHhhcHHHHHHH
Q 014710 265 IKKIASEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKL--------YHPFSVNLMQTREKLIKILMELEDWKEALAY 336 (420)
Q Consensus 265 ~~~~~~~~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~--------l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~ 336 (420)
.....+....+...+..+..+|++++|+..|++++...... ....++....++.+++.+|...|+|++|+++
T Consensus 216 ~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~ 295 (370)
T 1ihg_A 216 VDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDS 295 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHH
Confidence 34444556667778888899999999999999998854331 1114566778899999999999999999999
Q ss_pred HHHhHHHHHHhcCCCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchHHHHH
Q 014710 337 CQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELI 401 (420)
Q Consensus 337 ~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~~~~~ 401 (420)
+++++.+ +|..+..++.+|.++..+|++++|+..|++|+++ .|+++.+...+
T Consensus 296 ~~~al~~--------~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l-----~P~~~~~~~~l 347 (370)
T 1ihg_A 296 CLEALEI--------DPSNTKALYRRAQGWQGLKEYDQALADLKKAQEI-----APEDKAIQAEL 347 (370)
T ss_dssp HHHHHTT--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCHHHHHHH
T ss_pred HHHHHHh--------CchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHh-----CCCCHHHHHHH
Confidence 9999874 4566788999999999999999999999999986 45666554433
No 53
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.50 E-value=2.7e-06 Score=78.76 Aligned_cols=128 Identities=10% Similarity=0.012 Sum_probs=98.7
Q ss_pred HhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHH
Q 014710 279 TLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQ 358 (420)
Q Consensus 279 a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~ 358 (420)
+......|++++|+..+++++...... ........++..++.+|...|++++|+.++++++.+.+... .........
T Consensus 122 ~~~~~~~~~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~-~~~~~~~~~ 198 (293)
T 2qfc_A 122 AAYVLKKVDYEYCILELKKLLNQQLTG--IDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALH-DNEEFDVKV 198 (293)
T ss_dssp HHHHHTSSCHHHHHHHHHHHHTTCCCS--SCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSC-CCHHHHHHH
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHhcC--CchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcC-ccccchHHH
Confidence 344566789999999999987654332 23334678899999999999999999999999999887653 222223389
Q ss_pred HHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHH
Q 014710 359 YYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEA 411 (420)
Q Consensus 359 l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~~~~~~~l~~~~~~~ 411 (420)
++++|.++..+|++++|+.++++|+++... ..++.....+...++.+...+
T Consensus 199 ~~nlg~~y~~~~~y~~Al~~~~kal~~~~~--~~~~~~~~~~~~~lg~~y~~~ 249 (293)
T 2qfc_A 199 RYNHAKALYLDSRYEESLYQVNKAIEISCR--INSMALIGQLYYQRGECLRKL 249 (293)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHH--TTBCSSHHHHHHHHHHHHHHT
T ss_pred HHhHHHHHHHHhhHHHHHHHHHHHHHHHHh--cCcHHHHHHHHHHHHHHHHHc
Confidence 999999999999999999999999999854 445666667777776664433
No 54
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=98.50 E-value=1.4e-06 Score=78.97 Aligned_cols=118 Identities=8% Similarity=0.072 Sum_probs=98.7
Q ss_pred CCChHHHHHHHHHHHHHhhhhcCCCChhHHHHH--------------HHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCC
Q 014710 285 CGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTR--------------EKLIKILMELEDWKEALAYCQLTIPVYQRVYPQ 350 (420)
Q Consensus 285 ~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~--------------~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~ 350 (420)
.|++++|+..+++++.. .|.++....+. ..++.+|...|++++|+..+++++... +
T Consensus 110 ~~~~~~A~~~~~~~l~~-----~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~-----p 179 (261)
T 3qky_A 110 QTDTRKAIEAFQLFIDR-----YPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAY-----P 179 (261)
T ss_dssp CHHHHHHHHHHHHHHHH-----CTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----T
T ss_pred chhHHHHHHHHHHHHHH-----CcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHC-----C
Confidence 78899999999999775 47777666665 788999999999999999999987653 5
Q ss_pred CChHHHHHHHHhhHHHHhh----------cChHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHhccccc
Q 014710 351 FHPLLGLQYYTCGKLEWFL----------GDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEASYKLSS 417 (420)
Q Consensus 351 ~hp~~~~~l~~La~~~~~~----------g~~~eA~~~l~~A~~i~~~~~G~~h~~~~~~~~~l~~~~~~~~~~~~~ 417 (420)
.++.....++.+|.++..+ |++++|+..++++++.. |+++.+......+.++..++...+..
T Consensus 180 ~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~~~-----p~~~~~~~a~~~l~~~~~~~~~~~~~ 251 (261)
T 3qky_A 180 DTPWADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQIF-----PDSPLLRTAEELYTRARQRLTELEGD 251 (261)
T ss_dssp TSTTHHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHC-----TTCTHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCchHHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHHHHC-----CCChHHHHHHHHHHHHHHHHHHhhhh
Confidence 6777888999999999977 88999999999988754 89999999999999888777665543
No 55
>1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A
Probab=98.50 E-value=2.6e-08 Score=92.54 Aligned_cols=40 Identities=28% Similarity=0.347 Sum_probs=32.8
Q ss_pred hccccCCCCcCCceeE--EeC------CEEEEEEecCCCCCCccCCCh
Q 014710 182 VISIINHSCLPNAVLV--FEG------RLAVVRAVQHVPKGAEGQFDD 221 (420)
Q Consensus 182 ~~s~~NHSC~PN~~~~--f~~------~~~~vra~r~I~~Gee~~~~~ 221 (420)
.+.++||||.||+.+. +.+ .++.++|+|+|++||||+++|
T Consensus 213 ~aRfiNHSC~PN~~~~~v~~~~~~~~~~~i~~~A~rdI~~GEELt~dY 260 (299)
T 1mvh_A 213 VSRFFNHSCSPNIAIYSAVRNHGFRTIYDLAFFAIKDIQPLEELTFDY 260 (299)
T ss_dssp GGGGCEECSSCSEEEEEEESCTTCTTSCEEEEEESSCBCTTCBCEECC
T ss_pred hhheEeecCCCCeEEEEEEeecCCCCceEEEEEEccCcCCCCEEEEEc
Confidence 4568999999999864 322 389999999999999998665
No 56
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.50 E-value=4e-06 Score=64.95 Aligned_cols=107 Identities=23% Similarity=0.233 Sum_probs=84.9
Q ss_pred HHHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCC
Q 014710 273 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 352 (420)
Q Consensus 273 ~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~h 352 (420)
......+......|++++|+..+++++.. .|.+ ..++..++.++...|++++|+.++++++.. .
T Consensus 5 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~-----~~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~--------~ 68 (118)
T 1elw_A 5 NELKEKGNKALSVGNIDDALQCYSEAIKL-----DPHN---HVLYSNRSAAYAKKGDYQKAYEDGCKTVDL--------K 68 (118)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------C
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHH-----CCCc---HHHHHHHHHHHHhhccHHHHHHHHHHHHHh--------C
Confidence 44455666777889999999999999765 3444 456778999999999999999999998875 2
Q ss_pred hHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchHHHH
Q 014710 353 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKEL 400 (420)
Q Consensus 353 p~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~~~~ 400 (420)
|.....++.+|.++...|++++|..++++++++ .|+++.....
T Consensus 69 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~-----~~~~~~~~~~ 111 (118)
T 1elw_A 69 PDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKH-----EANNPQLKEG 111 (118)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT-----CTTCHHHHHH
T ss_pred cccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHc-----CCCCHHHHHH
Confidence 344568899999999999999999999999864 5666655433
No 57
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.48 E-value=1.5e-06 Score=85.73 Aligned_cols=118 Identities=10% Similarity=0.043 Sum_probs=99.3
Q ss_pred HHhhhhcCCChHHHHHHHHHHHHHhhhhcC-CCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHH
Q 014710 278 KTLALTSCGNHQEVVSTYKMIEKLQKKLYH-PFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLG 356 (420)
Q Consensus 278 ~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~-~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~ 356 (420)
.+.....+|++++|++.+++++++.+...+ ..++..+.++.+++.+|..+|++++|..++++++.+.+.+.++.++..+
T Consensus 57 Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~~~~~ 136 (472)
T 4g1t_A 57 LAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYRIESP 136 (472)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSCCCCH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccccchhhH
Confidence 344556789999999999999988655433 3477788899999999999999999999999999999999999999999
Q ss_pred HHHHHhhHHHHhh--cChHHHHHHHHHHHHHHHHhcCCCCchHHHH
Q 014710 357 LQYYTCGKLEWFL--GDTENAIKSMTEAVEILRITHGTNSPFMKEL 400 (420)
Q Consensus 357 ~~l~~La~~~~~~--g~~~eA~~~l~~A~~i~~~~~G~~h~~~~~~ 400 (420)
..+.++|.++... +++++|+.+|++|+.+ .|++|.....
T Consensus 137 ~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~-----~p~~~~~~~~ 177 (472)
T 4g1t_A 137 ELDCEEGWTRLKCGGNQNERAKVCFEKALEK-----KPKNPEFTSG 177 (472)
T ss_dssp HHHHHHHHHHHHHCTTHHHHHHHHHHHHHHH-----STTCHHHHHH
T ss_pred HHHHHHHHHHHHHccccHHHHHHHHHHHHHh-----CCCCHHHHHH
Confidence 9999998877665 5799999999999876 5777765443
No 58
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.48 E-value=3.3e-06 Score=81.10 Aligned_cols=110 Identities=11% Similarity=0.007 Sum_probs=94.5
Q ss_pred HHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChH
Q 014710 275 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 354 (420)
Q Consensus 275 l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~ 354 (420)
....+......|++++|++.+++++.+.++. +.......++.+|+.+|...|++++|+.++++++.+.+.. .+|.
T Consensus 185 ~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~---~~~~ 259 (378)
T 3q15_A 185 LFVIAGNYDDFKHYDKALPHLEAALELAMDI--QNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREK---VPDL 259 (378)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH---CGGG
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhh---CChh
Confidence 3445556677899999999999999887554 3445678899999999999999999999999999998876 4566
Q ss_pred HHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHh
Q 014710 355 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRIT 389 (420)
Q Consensus 355 ~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~ 389 (420)
.+..++.||.++..+|++++|+.++++|+++....
T Consensus 260 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 294 (378)
T 3q15_A 260 LPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITAR 294 (378)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTT
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHc
Confidence 68999999999999999999999999999987654
No 59
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.48 E-value=4.5e-06 Score=80.56 Aligned_cols=130 Identities=12% Similarity=0.067 Sum_probs=107.2
Q ss_pred HHHHHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChh-HHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcC
Q 014710 271 EVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVN-LMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYP 349 (420)
Q Consensus 271 ~~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~-~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g 349 (420)
....+...+..+...|++++|+..+++++.. .|.++. ...++..++.++...|++++|+.++++++...+..
T Consensus 47 ~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~-----~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~-- 119 (411)
T 4a1s_A 47 MCLELALEGERLCNAGDCRAGVAFFQAAIQA-----GTEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSM-- 119 (411)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CCSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT--
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHh-----cccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHc--
Confidence 3455556677778899999999999999875 466655 45788999999999999999999999999998776
Q ss_pred CCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHH
Q 014710 350 QFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQA 409 (420)
Q Consensus 350 ~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~~~~~~~l~~~~~ 409 (420)
.++|..+..++.+|.++...|++++|+.++++|+++.... .+++....+...++.+..
T Consensus 120 ~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~l~~~~~ 177 (411)
T 4a1s_A 120 NDRLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQL--GDRLSEGRALYNLGNVYH 177 (411)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHH
T ss_pred cCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHh--hchHHHHHHHHHHHHHHH
Confidence 5689999999999999999999999999999999998875 245555555555555543
No 60
>2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A*
Probab=98.48 E-value=3.9e-08 Score=89.44 Aligned_cols=41 Identities=20% Similarity=0.132 Sum_probs=33.5
Q ss_pred hccccCCCCcCCceeEE-eC---CE-EEEEEecCCCCCCccCCChH
Q 014710 182 VISIINHSCLPNAVLVF-EG---RL-AVVRAVQHVPKGAEGQFDDI 222 (420)
Q Consensus 182 ~~s~~NHSC~PN~~~~f-~~---~~-~~vra~r~I~~Gee~~~~~~ 222 (420)
.+.++||||.|||...+ .+ ++ +.++|+|||++||||+++|-
T Consensus 186 ~aRfiNHSC~PN~~~~~~~~~~~~~~i~i~A~RdI~~GEELt~dYg 231 (261)
T 2f69_A 186 LGHKANHSFTPNCIYDMFVHPRFGPIKCIRTLRAVEADEELTVAYG 231 (261)
T ss_dssp CGGGCEECSSCSEEEEEEEETTTEEEEEEEESSCBCTTCEEEECCC
T ss_pred ceeeEeeCCCCCeEEEEEEcCCCCcEEEEEECcccCCCCEEEEEcC
Confidence 35688999999999987 22 34 48999999999999997653
No 61
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.47 E-value=4.3e-06 Score=72.07 Aligned_cols=113 Identities=11% Similarity=0.045 Sum_probs=94.2
Q ss_pred HHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCCh
Q 014710 274 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 353 (420)
Q Consensus 274 ~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp 353 (420)
.....+......|++++|+..+++++...+. .+........++.+++.++...|++++|+.++++++.+.+.. .+..
T Consensus 68 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~ 144 (203)
T 3gw4_A 68 ALHQVGMVERMAGNWDAARRCFLEERELLAS-LPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQA--DDQV 144 (203)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT--TCHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH-cCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhc--cchH
Confidence 3344555667789999999999999988653 333344778889999999999999999999999999987653 3456
Q ss_pred HHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHh
Q 014710 354 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRIT 389 (420)
Q Consensus 354 ~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~ 389 (420)
..+..+..+|.++..+|++++|..++++|+++.+..
T Consensus 145 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 180 (203)
T 3gw4_A 145 AIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFAEL 180 (203)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHc
Confidence 678889999999999999999999999999999875
No 62
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=98.47 E-value=1.9e-06 Score=71.48 Aligned_cols=109 Identities=11% Similarity=-0.048 Sum_probs=88.0
Q ss_pred HHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHH
Q 014710 276 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL 355 (420)
Q Consensus 276 ~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~ 355 (420)
+..|..+...|++++|++.+++++++ .|++ ..++..++.++...|++++|+.++++++.+ .|.-
T Consensus 35 ~~la~~y~~~~~~~~A~~~~~~al~~-----~p~~---~~a~~~lg~~~~~~~~~~~A~~~~~~al~~--------~p~~ 98 (150)
T 4ga2_A 35 FYFAKLYYEAKEYDLAKKYICTYINV-----QERD---PKAHRFLGLLYELEENTDKAVECYRRSVEL--------NPTQ 98 (150)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHcCchHHHHHHHHHHHHh--------CCCC
Confidence 34556677889999999999999875 3454 567888999999999999999999999876 3555
Q ss_pred HHHHHHhhHHHHhhcChHHHHH-HHHHHHHHHHHhcCCCCchHHHHHHHHH
Q 014710 356 GLQYYTCGKLEWFLGDTENAIK-SMTEAVEILRITHGTNSPFMKELILKLE 405 (420)
Q Consensus 356 ~~~l~~La~~~~~~g~~~eA~~-~l~~A~~i~~~~~G~~h~~~~~~~~~l~ 405 (420)
...+++||.++...|++++|.. ++++|+++ -|+||.+..++..|.
T Consensus 99 ~~~~~~la~~~~~~~~~~~aa~~~~~~al~l-----~P~~~~~~~l~~~ll 144 (150)
T 4ga2_A 99 KDLVLKIAELLCKNDVTDGRAKYWVERAAKL-----FPGSPAVYKLKEQLL 144 (150)
T ss_dssp HHHHHHHHHHHHHHCSSSSHHHHHHHHHHHH-----STTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHHh-----CcCCHHHHHHHHHHH
Confidence 6689999999999999987665 56889875 588988876665553
No 63
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.46 E-value=5.6e-06 Score=76.73 Aligned_cols=123 Identities=11% Similarity=-0.036 Sum_probs=96.3
Q ss_pred hhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHH
Q 014710 280 LALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQY 359 (420)
Q Consensus 280 ~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l 359 (420)
..+...|++++|++.|++++.+..+. .+......++.+++.+|...|++++|+.++++++.++... ++....+..+
T Consensus 45 ~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~--g~~~~~a~~~ 120 (292)
T 1qqe_A 45 TIYRLRKELNLAGDSFLKAADYQKKA--GNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHR--GQFRRGANFK 120 (292)
T ss_dssp HHHHHTTCTHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHc--CCHHHHHHHH
Confidence 34566899999999999999887553 2334567899999999999999999999999999988654 3455668899
Q ss_pred HHhhHHHHhh-cChHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHH
Q 014710 360 YTCGKLEWFL-GDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQ 408 (420)
Q Consensus 360 ~~La~~~~~~-g~~~eA~~~l~~A~~i~~~~~G~~h~~~~~~~~~l~~~~ 408 (420)
.++|.++... |++++|+.+|++|+++.... | +++....++..++.+.
T Consensus 121 ~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~-~-~~~~~~~~~~~lg~~~ 168 (292)
T 1qqe_A 121 FELGEILENDLHDYAKAIDCYELAGEWYAQD-Q-SVALSNKCFIKCADLK 168 (292)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT-T-CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCHHHHHHHHHHHHHHHHhC-C-ChHHHHHHHHHHHHHH
Confidence 9999999996 99999999999999998743 1 1122234455555543
No 64
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.44 E-value=1.1e-06 Score=69.46 Aligned_cols=99 Identities=12% Similarity=0.079 Sum_probs=78.4
Q ss_pred CCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhH
Q 014710 285 CGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGK 364 (420)
Q Consensus 285 ~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~ 364 (420)
.|++++|+..+++++.. ++.++....++..++.++...|++++|+.++++++.. +|.-...++.+|.
T Consensus 3 ~g~~~~A~~~~~~al~~-----~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~l~~ 69 (117)
T 3k9i_A 3 LGLEAQAVPYYEKAIAS-----GLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQ--------FPNHQALRVFYAM 69 (117)
T ss_dssp ----CCCHHHHHHHHSS-----CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHc-----CCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCchHHHHHHHH
Confidence 46788899999888653 3446778899999999999999999999999999876 2444678899999
Q ss_pred HHHhhcChHHHHHHHHHHHHHHHHhcCCCCchHHHHH
Q 014710 365 LEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELI 401 (420)
Q Consensus 365 ~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~~~~~ 401 (420)
++..+|++++|+.++++++.. .|++|.+....
T Consensus 70 ~~~~~g~~~~A~~~~~~al~~-----~p~~~~~~~~~ 101 (117)
T 3k9i_A 70 VLYNLGRYEQGVELLLKIIAE-----TSDDETIQSYK 101 (117)
T ss_dssp HHHHHTCHHHHHHHHHHHHHH-----HCCCHHHHHTH
T ss_pred HHHHcCCHHHHHHHHHHHHHh-----CCCcHHHHHHH
Confidence 999999999999999999875 35666554433
No 65
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=98.43 E-value=2.1e-06 Score=89.93 Aligned_cols=93 Identities=20% Similarity=0.240 Sum_probs=51.3
Q ss_pred HHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHH
Q 014710 277 KKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLG 356 (420)
Q Consensus 277 ~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~ 356 (420)
..+..+...|++++|+..|++++++ ++....++.+|+.++..+|++++|++++++++.+ +|..+
T Consensus 48 nLg~~l~~~g~~~eA~~~~~~Al~l--------~P~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l--------~P~~~ 111 (723)
T 4gyw_A 48 NLASVLQQQGKLQEALMHYKEAIRI--------SPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQI--------NPAFA 111 (723)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCH
Confidence 3344444555555555555555543 1222345555666666666666666666665544 34445
Q ss_pred HHHHHhhHHHHhhcChHHHHHHHHHHHHH
Q 014710 357 LQYYTCGKLEWFLGDTENAIKSMTEAVEI 385 (420)
Q Consensus 357 ~~l~~La~~~~~~g~~~eA~~~l~~A~~i 385 (420)
..+++||.++..+|++++|+..|++|+++
T Consensus 112 ~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l 140 (723)
T 4gyw_A 112 DAHSNLASIHKDSGNIPEAIASYRTALKL 140 (723)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 55666666666666666666666666553
No 66
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=98.41 E-value=9.8e-06 Score=71.02 Aligned_cols=107 Identities=12% Similarity=0.170 Sum_probs=85.9
Q ss_pred HHHHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHH----------------HHHHHHHhhcHHHHHH
Q 014710 272 VNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREK----------------LIKILMELEDWKEALA 335 (420)
Q Consensus 272 ~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~----------------L~~~~~~~g~~~~A~~ 335 (420)
++.++..+......|++++|+..+++++... |.-..++.. ++.++...|++++|+.
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~--------p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~ 75 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIALN--------IDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYL 75 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------HHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC--------CCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHH
Confidence 3455667777788999999999999998752 222333444 9999999999999999
Q ss_pred HHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchHHH
Q 014710 336 YCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKE 399 (420)
Q Consensus 336 ~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~~~ 399 (420)
.+++++.. +|.-...++.+|.++...|++++|+..|++|+++ .|+++....
T Consensus 76 ~~~~al~~--------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~-----~P~~~~a~~ 126 (208)
T 3urz_A 76 FYKELLQK--------APNNVDCLEACAEMQVCRGQEKDALRMYEKILQL-----EADNLAANI 126 (208)
T ss_dssp HHHHHHHH--------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-----CTTCHHHHH
T ss_pred HHHHHHHH--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc-----CCCCHHHHH
Confidence 99999876 3555678999999999999999999999999985 567765543
No 67
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=98.41 E-value=1.5e-05 Score=66.03 Aligned_cols=106 Identities=13% Similarity=0.111 Sum_probs=86.4
Q ss_pred HHHHHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCC
Q 014710 271 EVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQ 350 (420)
Q Consensus 271 ~~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~ 350 (420)
........+..+...|++++|+..+++++.. .|.+ ..++..++.++...|++++|+.++++++..
T Consensus 12 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~-----~~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~------- 76 (166)
T 1a17_A 12 RAEELKTQANDYFKAKDYENAIKFYSQAIEL-----NPSN---AIYYGNRSLAYLRTECYGYALGDATRAIEL------- 76 (166)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----STTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-------
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHh-----CCCC---hHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-------
Confidence 4455566777778899999999999999875 2333 567788999999999999999999998876
Q ss_pred CChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchH
Q 014710 351 FHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFM 397 (420)
Q Consensus 351 ~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~ 397 (420)
+|.....++.+|.++..+|++++|+.++++++.+ .|+++..
T Consensus 77 -~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~-----~p~~~~~ 117 (166)
T 1a17_A 77 -DKKYIKGYYRRAASNMALGKFRAALRDYETVVKV-----KPHDKDA 117 (166)
T ss_dssp -CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----STTCHHH
T ss_pred -CcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHh-----CCCCHHH
Confidence 2445678999999999999999999999999875 4555544
No 68
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.41 E-value=1.1e-05 Score=74.72 Aligned_cols=126 Identities=16% Similarity=0.129 Sum_probs=102.2
Q ss_pred HHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChh-HHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCC
Q 014710 274 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVN-LMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 352 (420)
Q Consensus 274 ~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~-~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~h 352 (420)
.+...+......|++++|+..+++++.. .|.++. ...++..++.++...|++++|+.++++++...+.. .++
T Consensus 7 ~l~~~g~~~~~~g~~~~A~~~~~~al~~-----~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~~~ 79 (338)
T 3ro2_A 7 ELALEGERLCKSGDCRAGVSFFEAAVQV-----GTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTI--GDQ 79 (338)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TCH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhh-----CcccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcc--ccc
Confidence 3445566677889999999999999875 455555 46788999999999999999999999999998877 577
Q ss_pred hHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHH
Q 014710 353 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQ 408 (420)
Q Consensus 353 p~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~~~~~~~l~~~~ 408 (420)
|..+..+..+|.++...|++++|+.++++|+++.... .+++....+...++.+.
T Consensus 80 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~l~~~~ 133 (338)
T 3ro2_A 80 LGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISREL--NDKVGEARALYNLGNVY 133 (338)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHh--cCchHHHHHHHHHHHHH
Confidence 8899999999999999999999999999999998875 23344444444444443
No 69
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=98.40 E-value=1.9e-06 Score=68.82 Aligned_cols=94 Identities=12% Similarity=-0.042 Sum_probs=77.1
Q ss_pred HHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHH
Q 014710 276 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL 355 (420)
Q Consensus 276 ~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~ 355 (420)
+..+..+...|++++|+..+++++.. .|.+ ..++..++.++...|++++|+..+++++.+ .|.-
T Consensus 21 ~~~g~~~~~~g~~~~A~~~~~~al~~-----~P~~---~~a~~~lg~~~~~~g~~~~A~~~~~~al~l--------~P~~ 84 (121)
T 1hxi_A 21 MEEGLSMLKLANLAEAALAFEAVCQK-----EPER---EEAWRSLGLTQAENEKDGLAIIALNHARML--------DPKD 84 (121)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH-----STTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHH-----CCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCC
Confidence 34455566789999999999999875 3444 567788999999999999999999998876 2444
Q ss_pred HHHHHHhhHHHHhhcChHHHHHHHHHHHHH
Q 014710 356 GLQYYTCGKLEWFLGDTENAIKSMTEAVEI 385 (420)
Q Consensus 356 ~~~l~~La~~~~~~g~~~eA~~~l~~A~~i 385 (420)
...++.||.++...|++++|+..+++++++
T Consensus 85 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 114 (121)
T 1hxi_A 85 IAVHAALAVSHTNEHNANAALASLRAWLLS 114 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 558899999999999999999999999864
No 70
>2qpw_A PR domain zinc finger protein 2; methyltransferase, activator, alternative initiation, alternative splicing, DNA-binding, metal-binding, nucleus; 1.79A {Homo sapiens} PDB: 2jv0_A*
Probab=98.40 E-value=1.4e-07 Score=78.21 Aligned_cols=39 Identities=15% Similarity=0.156 Sum_probs=35.0
Q ss_pred ccccCCCCcC---CceeEEeCCEEEEEEecCCCCCCccCCCh
Q 014710 183 ISIINHSCLP---NAVLVFEGRLAVVRAVQHVPKGAEGQFDD 221 (420)
Q Consensus 183 ~s~~NHSC~P---N~~~~f~~~~~~vra~r~I~~Gee~~~~~ 221 (420)
+-++||||.| |+...-.++++.++|+|+|++|||++|+|
T Consensus 100 ~RfINhSc~p~eqNl~~~~~~~~I~~~A~RdI~~GEEL~~dY 141 (149)
T 2qpw_A 100 LRYVNWACSGEEQNLFPLEINRAIYYKTLKPIAPGEELLVWY 141 (149)
T ss_dssp GGGCEECBTTBTCCEEEEEETTEEEEEESSCBCTTCBCEECC
T ss_pred eeeeeccCChhhcCEEEEEECCEEEEEEccCCCCCCEEEEcc
Confidence 5688999999 99986668899999999999999999765
No 71
>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A
Probab=98.40 E-value=6.3e-08 Score=90.27 Aligned_cols=39 Identities=21% Similarity=0.162 Sum_probs=32.4
Q ss_pred ccccCCCCcCCceeEE-eC---CE-EEEEEecCCCCCCccCCCh
Q 014710 183 ISIINHSCLPNAVLVF-EG---RL-AVVRAVQHVPKGAEGQFDD 221 (420)
Q Consensus 183 ~s~~NHSC~PN~~~~f-~~---~~-~~vra~r~I~~Gee~~~~~ 221 (420)
+.++||||.|||...+ .. ++ +.|+|+|||++|||||+++
T Consensus 241 ar~iNHsc~pN~~~~~~~~~~~~~~~~~~a~r~I~~geElt~~Y 284 (293)
T 1h3i_A 241 GHKANHSFTPNCIYDMFVHPRFGPIKCIRTLRAVEADEELTVAY 284 (293)
T ss_dssp GGGSEEESSCSEEEEEEEETTTEEEEEEEESSCBCTTCEEEEEE
T ss_pred eeeeccCCCCCeEEEEEEcCCCCcEEEEEECCccCCCCEEEEec
Confidence 5578999999999987 22 34 4899999999999998764
No 72
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=98.39 E-value=5.9e-06 Score=65.68 Aligned_cols=94 Identities=16% Similarity=0.166 Sum_probs=77.6
Q ss_pred HHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHH
Q 014710 276 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL 355 (420)
Q Consensus 276 ~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~ 355 (420)
...+..+...|++++|+..+++++.. .|.+ ..++..++.++...|++++|+.++++++.. .|..
T Consensus 20 ~~~~~~~~~~~~~~~A~~~~~~al~~-----~~~~---~~~~~~la~~~~~~~~~~~A~~~~~~a~~~--------~~~~ 83 (133)
T 2lni_A 20 KNKGNECFQKGDYPQAMKHYTEAIKR-----NPKD---AKLYSNRAACYTKLLEFQLALKDCEECIQL--------EPTF 83 (133)
T ss_dssp HHHHHHHHHTTCSHHHHHHHHHHHTT-----CTTC---HHHHHHHHHHHTTTTCHHHHHHHHHHHHHH--------CTTC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHc-----CCCc---HHHHHHHHHHHHHhccHHHHHHHHHHHHHh--------CCCc
Confidence 34455566789999999999998753 3333 567788999999999999999999998875 2445
Q ss_pred HHHHHHhhHHHHhhcChHHHHHHHHHHHHH
Q 014710 356 GLQYYTCGKLEWFLGDTENAIKSMTEAVEI 385 (420)
Q Consensus 356 ~~~l~~La~~~~~~g~~~eA~~~l~~A~~i 385 (420)
...++.+|.++..+|++++|+.++++++.+
T Consensus 84 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 113 (133)
T 2lni_A 84 IKGYTRKAAALEAMKDYTKAMDVYQKALDL 113 (133)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 668899999999999999999999999876
No 73
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=98.39 E-value=1.4e-05 Score=62.90 Aligned_cols=98 Identities=17% Similarity=0.171 Sum_probs=80.3
Q ss_pred HHHHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCC
Q 014710 272 VNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQF 351 (420)
Q Consensus 272 ~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~ 351 (420)
.......+......|++++|+..+++++.. .|.+ ..++..++.++...|++++|+.++.+++..
T Consensus 12 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~-----~~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~-------- 75 (131)
T 2vyi_A 12 AERLKTEGNEQMKVENFEAAVHFYGKAIEL-----NPAN---AVYFCNRAAAYSKLGNYAGAVQDCERAICI-------- 75 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------
T ss_pred hHHHHHHHHHHHHccCHHHHHHHHHHHHHc-----CCCC---HHHHHHHHHHHHHhhchHHHHHHHHHHHhc--------
Confidence 344455566677789999999999999765 2333 557788999999999999999999998875
Q ss_pred ChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHH
Q 014710 352 HPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 385 (420)
Q Consensus 352 hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i 385 (420)
.|.....++.+|.++...|++++|+.++++++.+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 109 (131)
T 2vyi_A 76 DPAYSKAYGRMGLALSSLNKHVEAVAYYKKALEL 109 (131)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 2334668899999999999999999999999876
No 74
>3smt_A Histone-lysine N-methyltransferase SETD3; histone methyltransferase, histone modification, LYSI translational modification, structural genomics; HET: SAM; 2.04A {Homo sapiens}
Probab=98.39 E-value=2.1e-07 Score=92.82 Aligned_cols=89 Identities=12% Similarity=0.153 Sum_probs=70.7
Q ss_pred CCCHHHHHHHHHHhhhcccccccCCCcccccchhhhccccCCCCcCCce-eEEeCCEEEEEEecCCCCCCccC--CChHh
Q 014710 147 EISINEIAENFSKLACNAHTICNSELRPLGTGLYPVISIINHSCLPNAV-LVFEGRLAVVRAVQHVPKGAEGQ--FDDIQ 223 (420)
Q Consensus 147 ~~~~~~i~~~~~~~~~N~~~i~~~~~~~~g~glyp~~s~~NHSC~PN~~-~~f~~~~~~vra~r~I~~Gee~~--~~~~~ 223 (420)
.++.+.+...++.+.+++|.+...++...+.+|+|.+.|+||||.||.. +.++++.+.++|.++|++|||++ |.+..
T Consensus 237 ~~t~e~f~wA~~~v~SRa~~~~~~~g~~~~~~LvP~~Dm~NH~~~~~~~~~~~~~~~~~~~a~~~i~~Geei~isYG~~~ 316 (497)
T 3smt_A 237 SFTYEDYRWAVSSVMTRQNQIPTEDGSRVTLALIPLWDMCNHTNGLITTGYNLEDDRCECVALQDFRAGEQIYIFYGTRS 316 (497)
T ss_dssp CCCHHHHHHHHHHHHHHCEEEECTTSSSEEEEECTTGGGCEECSCSEEEEEETTTTEEEEEESSCBCTTCEEEECCCSCC
T ss_pred ccCHHHHHHhhheEecccccccCcccccccceeechHHhhcCCCcccceeeeccCCeEEEEeCCccCCCCEEEEeCCCCC
Confidence 4678888889999999999997766656678999999999999999643 33457889999999999999975 66554
Q ss_pred HHHHh--cCccccC
Q 014710 224 ESAIL--EGYRCKD 235 (420)
Q Consensus 224 ~~~l~--~~~~C~c 235 (420)
...|+ +||.+..
T Consensus 317 n~~Ll~~YGFv~~~ 330 (497)
T 3smt_A 317 NAEFVIHSGFFFDN 330 (497)
T ss_dssp HHHHHHHHSCCCTT
T ss_pred hHHHHHHCCCCCCC
Confidence 44443 4888764
No 75
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=98.38 E-value=4.9e-06 Score=73.86 Aligned_cols=119 Identities=17% Similarity=0.140 Sum_probs=93.9
Q ss_pred HHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCCh
Q 014710 274 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 353 (420)
Q Consensus 274 ~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp 353 (420)
.+...+..+...|++++|+..+++++.. .|.++....++..++.++...|+|++|+..+++++... +.++
T Consensus 6 ~~~~~a~~~~~~g~~~~A~~~~~~~~~~-----~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~-----P~~~ 75 (225)
T 2yhc_A 6 EIYATAQQKLQDGNWRQAITQLEALDNR-----YPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLN-----PTHP 75 (225)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHH-----CTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----TTCT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHC-----cCCC
Confidence 3455666677789999999999999764 57788888899999999999999999999999987643 5677
Q ss_pred HHHHHHHHhhHHHHh------------------hcChHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHH
Q 014710 354 LLGLQYYTCGKLEWF------------------LGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEA 407 (420)
Q Consensus 354 ~~~~~l~~La~~~~~------------------~g~~~eA~~~l~~A~~i~~~~~G~~h~~~~~~~~~l~~~ 407 (420)
.....++.+|.++.. .|++++|+..++++++. -|+++...+.+..+..+
T Consensus 76 ~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~-----~P~~~~a~~a~~~l~~~ 142 (225)
T 2yhc_A 76 NIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRG-----YPNSQYTTDATKRLVFL 142 (225)
T ss_dssp THHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTT-----CTTCTTHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHH-----CcCChhHHHHHHHHHHH
Confidence 777888999988875 46888888888887654 36777766655544444
No 76
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.37 E-value=2e-06 Score=84.83 Aligned_cols=96 Identities=8% Similarity=-0.104 Sum_probs=83.2
Q ss_pred ChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcC-CCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHH
Q 014710 310 SVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYP-QFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRI 388 (420)
Q Consensus 310 h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g-~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~ 388 (420)
+.....+++.|+.++...|++++|++++++++++.+...+ ..+|..+..+.++|.+|..+|++++|+.++++|+.+...
T Consensus 47 ~~~~a~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~ 126 (472)
T 4g1t_A 47 REFKATMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEK 126 (472)
T ss_dssp ---CCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHh
Confidence 4445677889999999999999999999999999998887 569999999999999999999999999999999999999
Q ss_pred hcCCCCchHHHHHHHHH
Q 014710 389 THGTNSPFMKELILKLE 405 (420)
Q Consensus 389 ~~G~~h~~~~~~~~~l~ 405 (420)
..++.++...++...+.
T Consensus 127 ~~~~~~~~~~~~~~~~g 143 (472)
T 4g1t_A 127 FSSPYRIESPELDCEEG 143 (472)
T ss_dssp SCCSSCCCCHHHHHHHH
T ss_pred cccccchhhHHHHHHHH
Confidence 98888876666554443
No 77
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.37 E-value=8.8e-06 Score=78.48 Aligned_cols=130 Identities=11% Similarity=0.051 Sum_probs=105.6
Q ss_pred HHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCCh
Q 014710 274 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 353 (420)
Q Consensus 274 ~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp 353 (420)
.....+..+...|++++|+..+++++...... ..+.....++..++.++...|++++|+.++++++.+.... .+++
T Consensus 225 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~ 300 (411)
T 4a1s_A 225 ACGNLGNTYYLLGDFQAAIEHHQERLRIAREF--GDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVEL--GERE 300 (411)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHT--TCHH
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHHHHhc--CCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHc--CCHH
Confidence 33445566677899999999999998887652 3555677788999999999999999999999999998776 5667
Q ss_pred HHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHH
Q 014710 354 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQA 409 (420)
Q Consensus 354 ~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~~~~~~~l~~~~~ 409 (420)
..+..+..+|.++...|++++|+.++++|+.+.... .+++....+...++.+..
T Consensus 301 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~ 354 (411)
T 4a1s_A 301 VEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQEL--GDRIGEARACWSLGNAHS 354 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHC--CChHHHHHHHHHHHHHHH
Confidence 889999999999999999999999999999998876 244455556666665543
No 78
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.37 E-value=1.2e-05 Score=76.98 Aligned_cols=133 Identities=20% Similarity=0.153 Sum_probs=108.5
Q ss_pred HHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCCh
Q 014710 274 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 353 (420)
Q Consensus 274 ~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp 353 (420)
.....+..+...|++++|+..+++++...... +.+.....++..++.++...|++++|+.++++++.+.... .+++
T Consensus 229 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~--~~~~ 304 (406)
T 3sf4_A 229 AYSNLGNAYIFLGEFETASEYYKKTLLLARQL--KDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQEL--NDRI 304 (406)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHH
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHHHHhC--cCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhc--CCcH
Confidence 33445566677899999999999998876553 4566678899999999999999999999999999988775 4578
Q ss_pred HHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHh
Q 014710 354 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEAS 412 (420)
Q Consensus 354 ~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~~~~~~~l~~~~~~~~ 412 (420)
..+..+..+|.++...|++++|+.++++|+++.... | +.+....+...++++...+-
T Consensus 305 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~-~-~~~~~~~~~~~l~~~~~~~g 361 (406)
T 3sf4_A 305 GEGRACWSLGNAYTALGNHDQAMHFAEKHLEISREV-G-DKSGELTARLNLSDLQMVLG 361 (406)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT-T-CHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh-c-CCcchhHHHHHHHHHHHHhh
Confidence 889999999999999999999999999999998775 2 34556667777777755443
No 79
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.36 E-value=1.3e-05 Score=76.45 Aligned_cols=110 Identities=12% Similarity=0.077 Sum_probs=94.4
Q ss_pred HHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHH
Q 014710 277 KKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLG 356 (420)
Q Consensus 277 ~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~ 356 (420)
..+..+...|++++|+..+++++...... ........++..++.++...|++++|+.++++++...+..-+..+|..+
T Consensus 58 ~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~ 135 (373)
T 1hz4_A 58 VLGEVLHCKGELTRSLALMQQTEQMARQH--DVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHE 135 (373)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHH
T ss_pred HHHHHHHhcCcHHHHHHHHHHHHHHHHhc--CcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHH
Confidence 33444566799999999999998876552 2334456778899999999999999999999999999988778889999
Q ss_pred HHHHHhhHHHHhhcChHHHHHHHHHHHHHHHH
Q 014710 357 LQYYTCGKLEWFLGDTENAIKSMTEAVEILRI 388 (420)
Q Consensus 357 ~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~ 388 (420)
..+..+|.++...|++++|+.++++++++...
T Consensus 136 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 167 (373)
T 1hz4_A 136 FLVRIRAQLLWAWARLDEAEASARSGIEVLSS 167 (373)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999998765
No 80
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.35 E-value=1.3e-05 Score=76.64 Aligned_cols=124 Identities=16% Similarity=0.145 Sum_probs=101.6
Q ss_pred HHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChh-HHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCCh
Q 014710 275 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVN-LMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 353 (420)
Q Consensus 275 l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~-~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp 353 (420)
+...+..+...|++++|+..+++++.. .|.++. ...++..++.++...|++++|+.++++++.+.+.. .+.|
T Consensus 12 l~~~g~~~~~~g~~~~A~~~~~~al~~-----~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~ 84 (406)
T 3sf4_A 12 LALEGERLCKSGDCRAGVSFFEAAVQV-----GTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTI--GDQL 84 (406)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-----CCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHhc-----CcccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhc--cccH
Confidence 344566677789999999999999875 455555 56789999999999999999999999999998776 5778
Q ss_pred HHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHH
Q 014710 354 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEA 407 (420)
Q Consensus 354 ~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~~~~~~~l~~~ 407 (420)
..+..+..+|.++...|++++|+.++++|+++....- +++....+...++.+
T Consensus 85 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~l~~~ 136 (406)
T 3sf4_A 85 GEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELN--DKVGEARALYNLGNV 136 (406)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcc--cccchHHHHHHHHHH
Confidence 9999999999999999999999999999999988762 334444444444444
No 81
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=98.33 E-value=4.1e-06 Score=87.68 Aligned_cols=97 Identities=22% Similarity=0.275 Sum_probs=83.6
Q ss_pred HHHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCC
Q 014710 273 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 352 (420)
Q Consensus 273 ~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~h 352 (420)
+.+...+..+..+|++++|++.|++++++ .|++ ..++.+|+.+|...|++++|++++++++.+ .
T Consensus 10 ~al~nLG~~~~~~G~~~eAi~~~~kAl~l-----~P~~---~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l--------~ 73 (723)
T 4gyw_A 10 DSLNNLANIKREQGNIEEAVRLYRKALEV-----FPEF---AAAHSNLASVLQQQGKLQEALMHYKEAIRI--------S 73 (723)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CSCC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------C
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------C
Confidence 44455566677899999999999999875 2444 567889999999999999999999999876 4
Q ss_pred hHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHH
Q 014710 353 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 385 (420)
Q Consensus 353 p~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i 385 (420)
|..+..+++||.++..+|++++|+..|++|+++
T Consensus 74 P~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l 106 (723)
T 4gyw_A 74 PTFADAYSNMGNTLKEMQDVQGALQCYTRAIQI 106 (723)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 667789999999999999999999999999976
No 82
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=98.32 E-value=1.6e-05 Score=75.37 Aligned_cols=114 Identities=12% Similarity=0.127 Sum_probs=89.4
Q ss_pred HHHHHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcC-------CCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHH
Q 014710 271 EVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYH-------PFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPV 343 (420)
Q Consensus 271 ~~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~-------~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~ 343 (420)
........+..+...|++++|+..|++++.+...... ..++....++.+++.++...|++++|+.++++++.+
T Consensus 146 ~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~ 225 (336)
T 1p5q_A 146 QSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALEL 225 (336)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 3445556677778889999999999999876422100 011334678899999999999999999999999886
Q ss_pred HHHhcCCCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchH
Q 014710 344 YQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFM 397 (420)
Q Consensus 344 ~~~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~ 397 (420)
.|.-...++.+|.++..+|++++|+..|++|+++ .|+++..
T Consensus 226 --------~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l-----~P~~~~a 266 (336)
T 1p5q_A 226 --------DSNNEKGLSRRGEAHLAVNDFELARADFQKVLQL-----YPNNKAA 266 (336)
T ss_dssp --------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CSSCHHH
T ss_pred --------CCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH-----CCCCHHH
Confidence 3555678999999999999999999999999986 4555543
No 83
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.32 E-value=7.3e-06 Score=76.52 Aligned_cols=121 Identities=16% Similarity=0.094 Sum_probs=88.7
Q ss_pred hhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHH
Q 014710 281 ALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYY 360 (420)
Q Consensus 281 ~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~ 360 (420)
.+...|++++|+..+++++.+..+. ........++.+++.+|...|++++|+.++++++.++... .+....+..+.
T Consensus 45 ~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~--g~~~~~a~~~~ 120 (307)
T 2ifu_A 45 AFKNAKQLEQAKDAYLQEAEAHANN--RSLFHAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVEN--GTPDTAAMALD 120 (307)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTT--TCHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHc--CCHHHHHHHHH
Confidence 3556788888988888888876543 2334567788888899999999999999999998887542 34456778888
Q ss_pred HhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHH
Q 014710 361 TCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQ 408 (420)
Q Consensus 361 ~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~~~~~~~l~~~~ 408 (420)
++|.++.. |++++|+.+|++|+++.... | +......++..++.+.
T Consensus 121 ~lg~~~~~-g~~~~A~~~~~~Al~~~~~~-~-~~~~~~~~~~~lg~~~ 165 (307)
T 2ifu_A 121 RAGKLMEP-LDLSKAVHLYQQAAAVFENE-E-RLRQAAELIGKASRLL 165 (307)
T ss_dssp HHHHHHTT-TCHHHHHHHHHHHHHHHHHT-T-CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHc-CCHHHHHHHHHHHHHHHHhC-C-ChhHHHHHHHHHHHHH
Confidence 99999888 99999999999999888763 2 1223344555555553
No 84
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.32 E-value=1.1e-05 Score=75.17 Aligned_cols=108 Identities=10% Similarity=0.015 Sum_probs=87.1
Q ss_pred HHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHH
Q 014710 277 KKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLG 356 (420)
Q Consensus 277 ~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~ 356 (420)
..+..+...|++++|+..+++++.+.... ........++.+++.+|.. |++++|+.++++++.++... ...+..+
T Consensus 81 ~lg~~~~~~g~~~~A~~~~~~Al~l~~~~--g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~--~~~~~~~ 155 (307)
T 2ifu_A 81 QAGMMLKDLQRMPEAVQYIEKASVMYVEN--GTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENE--ERLRQAA 155 (307)
T ss_dssp HHHHHHHHTTCGGGGHHHHHHHHHHHHTT--TCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHT--TCHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhC--CChhHHH
Confidence 34445566789999999999998876542 1223457888999999988 99999999999999988763 3345668
Q ss_pred HHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHh
Q 014710 357 LQYYTCGKLEWFLGDTENAIKSMTEAVEILRIT 389 (420)
Q Consensus 357 ~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~ 389 (420)
..+.++|.++..+|++++|+.++++|+.+....
T Consensus 156 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 188 (307)
T 2ifu_A 156 ELIGKASRLLVRQQKFDEAAASLQKEKSMYKEM 188 (307)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc
Confidence 899999999999999999999999999987664
No 85
>3qxy_A N-lysine methyltransferase SETD6; epigenetics, protein lysine methyltransferase, transferase, network VIA methyllysine signaling; HET: SAM; 2.09A {Homo sapiens} PDB: 3rc0_A*
Probab=98.31 E-value=7.7e-07 Score=87.80 Aligned_cols=86 Identities=20% Similarity=0.229 Sum_probs=67.5
Q ss_pred CCHHHHHHHHHHhhhcccccccCC----CcccccchhhhccccCCCCcCCceeEEeCCEEEEEEecCCCCCCcc--CCCh
Q 014710 148 ISINEIAENFSKLACNAHTICNSE----LRPLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHVPKGAEG--QFDD 221 (420)
Q Consensus 148 ~~~~~i~~~~~~~~~N~~~i~~~~----~~~~g~glyp~~s~~NHSC~PN~~~~f~~~~~~vra~r~I~~Gee~--~~~~ 221 (420)
++.+.....++.+.+-+|.+...+ ....+.+|.|.+.|+||||.||+.+.|+++.+.++|.++|++|||+ +|.+
T Consensus 184 ~t~e~f~wA~~~v~SRsf~~~~~~~~~~~~~~~~~LvP~~D~~NH~~~~~~~~~~~~~~~~~~a~~~i~~Geei~~~YG~ 263 (449)
T 3qxy_A 184 RSLELYHQLVALVMAYSFQEPLEEEEDEKEPNSPVMVPAADILNHLANHNANLEYSANCLRMVATQPIPKGHEIFNTYGQ 263 (449)
T ss_dssp CCHHHHHHHHHHHHHHCBCCCCC-----CCCCCCBBCTTGGGCEECSSCSEEEEECSSEEEEEESSCBCTTCEEEECCSS
T ss_pred CcHHHHHHHHHHHHHHhcccccCcccccccCCceeEeecHHHhcCCCCCCeEEEEeCCeEEEEECCCcCCCchhhccCCC
Confidence 566677777788888888764321 2357899999999999999999999999999999999999999996 5776
Q ss_pred HhHHHHh--cCccc
Q 014710 222 IQESAIL--EGYRC 233 (420)
Q Consensus 222 ~~~~~l~--~~~~C 233 (420)
.....|+ +||..
T Consensus 264 ~~n~~ll~~YGF~~ 277 (449)
T 3qxy_A 264 MANWQLIHMYGFVE 277 (449)
T ss_dssp CCHHHHHHHHSCCC
T ss_pred CCHHHHHHhCCCCC
Confidence 5455544 36755
No 86
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.31 E-value=3e-06 Score=84.54 Aligned_cols=105 Identities=13% Similarity=0.086 Sum_probs=86.8
Q ss_pred HHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHH
Q 014710 276 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL 355 (420)
Q Consensus 276 ~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~ 355 (420)
...+..+..+|++++|++.++++++. +|. ...++.+++.++...|++++|++++++++.+ +|..
T Consensus 10 ~~lg~~~~~~g~~~~A~~~~~~Al~~-----~p~---~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l--------~p~~ 73 (477)
T 1wao_1 10 KTQANDYFKAKDYENAIKFYSQAIEL-----NPS---NAIYYGNRSLAYLRTECYGYALGDATRAIEL--------DKKY 73 (477)
T ss_dssp SSSSSSTTTTTCHHHHHHHHHHHHHH-----CTT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHS--------CTTC
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHh-----CCc---cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh--------CCCC
Confidence 34455667789999999999999875 233 3678889999999999999999999999876 5666
Q ss_pred HHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchHHHHH
Q 014710 356 GLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELI 401 (420)
Q Consensus 356 ~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~~~~~ 401 (420)
+..++++|.++..+|++++|+.++++|+++ .|+++.....+
T Consensus 74 ~~~~~~lg~~~~~~g~~~eA~~~~~~al~~-----~p~~~~~~~~l 114 (477)
T 1wao_1 74 IKGYYRRAASNMALGKFRAALRDYETVVKV-----KPHDKDAKMKY 114 (477)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-----STTCTTHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHHHHHHH
Confidence 789999999999999999999999999986 46666554433
No 87
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.31 E-value=3e-05 Score=60.45 Aligned_cols=102 Identities=23% Similarity=0.305 Sum_probs=79.7
Q ss_pred HHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHH
Q 014710 276 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL 355 (420)
Q Consensus 276 ~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~ 355 (420)
...+..+...|++++|++.+++++.. .|.+ ..++..++.++...|++++|+.++++++.. +|..
T Consensus 13 ~~~~~~~~~~~~~~~A~~~~~~~~~~-----~~~~---~~~~~~la~~~~~~~~~~~A~~~~~~~~~~--------~~~~ 76 (125)
T 1na0_A 13 YNLGNAYYKQGDYDEAIEYYQKALEL-----DPNN---AEAWYNLGNAYYKQGDYDEAIEYYQKALEL--------DPNN 76 (125)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHH-----CcCc---HHHHHHHHHHHHHhCCHHHHHHHHHHHHHh--------CCcc
Confidence 34455566789999999999998765 2333 456778999999999999999999998764 2333
Q ss_pred HHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchHH
Q 014710 356 GLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMK 398 (420)
Q Consensus 356 ~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~~ 398 (420)
...++.+|.++...|++++|..++++++.+ .|+++...
T Consensus 77 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~-----~~~~~~~~ 114 (125)
T 1na0_A 77 AEAWYNLGNAYYKQGDYDEAIEYYQKALEL-----DPNNAEAK 114 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHh-----CCCcHHHH
Confidence 567889999999999999999999999875 35555443
No 88
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=98.28 E-value=7.9e-06 Score=77.58 Aligned_cols=115 Identities=14% Similarity=0.144 Sum_probs=87.5
Q ss_pred HHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHH
Q 014710 277 KKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLG 356 (420)
Q Consensus 277 ~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~ 356 (420)
..+..+...|++++|++.+++++.. .|.+ ..++..++.++...|++++|+.++++++.. +|...
T Consensus 218 ~l~~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~~~~~l~~~~~~~g~~~~A~~~~~~al~~--------~p~~~ 281 (365)
T 4eqf_A 218 GLGVLFHLSGEFNRAIDAFNAALTV-----RPED---YSLWNRLGATLANGDRSEEAVEAYTRALEI--------QPGFI 281 (365)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhc--------CCCch
Confidence 3344556679999999999999875 3444 457788999999999999999999999876 46667
Q ss_pred HHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchH----HHHHHHHHHH
Q 014710 357 LQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFM----KELILKLEEA 407 (420)
Q Consensus 357 ~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~----~~~~~~l~~~ 407 (420)
..++.+|.++..+|++++|+.++++|+++.....|++++.. ..+...|..+
T Consensus 282 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 336 (365)
T 4eqf_A 282 RSRYNLGISCINLGAYREAVSNFLTALSLQRKSRNQQQVPHPAISGNIWAALRIA 336 (365)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHCC------------CHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccCCCcccchhhhHHHHHHHHHHH
Confidence 89999999999999999999999999999998888776544 3344444444
No 89
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.25 E-value=2.1e-05 Score=72.67 Aligned_cols=128 Identities=13% Similarity=0.100 Sum_probs=104.2
Q ss_pred HHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChH
Q 014710 275 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 354 (420)
Q Consensus 275 l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~ 354 (420)
....+..+...|++++|++.+++++...... +.++....++..++.++...|++++|+.++++++...... .+.+.
T Consensus 46 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~ 121 (338)
T 3ro2_A 46 YSQLGNAYFYLHDYAKALEYHHHDLTLARTI--GDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISREL--NDKVG 121 (338)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHhhcc--cccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHh--cCchH
Confidence 3345556677899999999999998876654 4566778899999999999999999999999999988775 45678
Q ss_pred HHHHHHHhhHHHHhhcC--------------------hHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHH
Q 014710 355 LGLQYYTCGKLEWFLGD--------------------TENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQ 408 (420)
Q Consensus 355 ~~~~l~~La~~~~~~g~--------------------~~eA~~~l~~A~~i~~~~~G~~h~~~~~~~~~l~~~~ 408 (420)
.+..+..+|.++...|+ +++|+.++++++.+.... .+.+....+...++.+.
T Consensus 122 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~~ 193 (338)
T 3ro2_A 122 EARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVRNALQAAVDLYEENLSLVTAL--GDRAAQGRAFGNLGNTH 193 (338)
T ss_dssp HHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHHHHHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCcccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhc--CCHHHHHHHHHHHHHHH
Confidence 89999999999999999 999999999999988775 24455555555555543
No 90
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=98.23 E-value=1e-05 Score=64.94 Aligned_cols=89 Identities=12% Similarity=0.090 Sum_probs=72.6
Q ss_pred hHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcC
Q 014710 312 NLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHG 391 (420)
Q Consensus 312 ~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G 391 (420)
....++.+|+..+...|+|++|++++.+++.+ +|.-+..++++|.++..+|++++|+..+++|+.+-.. ..
T Consensus 6 d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~--------~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~-~~ 76 (127)
T 4gcn_A 6 DAAIAEKDLGNAAYKQKDFEKAHVHYDKAIEL--------DPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRE-TR 76 (127)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-TT
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcc-cc
Confidence 34556788999999999999999999999876 4566778999999999999999999999999998655 45
Q ss_pred CCCchHHHHHHHHHHHHH
Q 014710 392 TNSPFMKELILKLEEAQA 409 (420)
Q Consensus 392 ~~h~~~~~~~~~l~~~~~ 409 (420)
.+++....++..+..+..
T Consensus 77 ~~~~~~a~~~~~lg~~~~ 94 (127)
T 4gcn_A 77 ADYKLIAKAMSRAGNAFQ 94 (127)
T ss_dssp CCHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHH
Confidence 566666666666665543
No 91
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.22 E-value=3.1e-05 Score=71.31 Aligned_cols=98 Identities=13% Similarity=0.135 Sum_probs=82.6
Q ss_pred HHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCCh
Q 014710 274 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 353 (420)
Q Consensus 274 ~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp 353 (420)
.+...+..+...|++++|+..|++++.. .|.+ ..++.+++.++...|++++|+.++++++.+ +|
T Consensus 6 ~~~~~g~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~~~~~la~~~~~~~~~~~A~~~~~~al~~--------~p 69 (281)
T 2c2l_A 6 ELKEQGNRLFVGRKYPEAAACYGRAITR-----NPLV---AVYYTNRALCYLKMQQPEQALADCRRALEL--------DG 69 (281)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CSCC---HHHHHHHHHHHHHTTCHHHHHHHHHHHTTS--------CT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCcc---HHHHHHHHHHHHHhcCHHHHHHHHHHHHHh--------CC
Confidence 3445666777889999999999999875 3444 466788999999999999999999998865 45
Q ss_pred HHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHH
Q 014710 354 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILR 387 (420)
Q Consensus 354 ~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~ 387 (420)
.....++.+|.++..+|++++|+.+|++|+++--
T Consensus 70 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p 103 (281)
T 2c2l_A 70 QSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAK 103 (281)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc
Confidence 5567899999999999999999999999998764
No 92
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=98.22 E-value=7.1e-06 Score=68.01 Aligned_cols=94 Identities=15% Similarity=0.085 Sum_probs=75.0
Q ss_pred hcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHh
Q 014710 283 TSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTC 362 (420)
Q Consensus 283 ~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~L 362 (420)
..+|++++|+..++++. +.++.-......++.+|...|+|++|++++++++.+ +|.-...++.|
T Consensus 8 ~~~~~~e~ai~~~~~a~--------~~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~--------~p~~~~a~~~l 71 (150)
T 4ga2_A 8 RSKADVERYIASVQGST--------PSPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINV--------QERDPKAHRFL 71 (150)
T ss_dssp CCHHHHHHHHHHHHHHS--------CSHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHH
T ss_pred HHcChHHHHHHHHHHhc--------ccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHH
Confidence 34566777777776663 334555556678999999999999999999999877 45567789999
Q ss_pred hHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchH
Q 014710 363 GKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFM 397 (420)
Q Consensus 363 a~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~ 397 (420)
|.++...|++++|+..|++|+++ .|+++.+
T Consensus 72 g~~~~~~~~~~~A~~~~~~al~~-----~p~~~~~ 101 (150)
T 4ga2_A 72 GLLYELEENTDKAVECYRRSVEL-----NPTQKDL 101 (150)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHH-----CTTCHHH
T ss_pred HHHHHHcCchHHHHHHHHHHHHh-----CCCCHHH
Confidence 99999999999999999999976 5566543
No 93
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=98.22 E-value=3.1e-05 Score=76.64 Aligned_cols=116 Identities=15% Similarity=0.233 Sum_probs=88.6
Q ss_pred HHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcC-------CCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHH
Q 014710 270 SEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYH-------PFSVNLMQTREKLIKILMELEDWKEALAYCQLTIP 342 (420)
Q Consensus 270 ~~~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~-------~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~ 342 (420)
.........+..++.+|++++|+..|++++.+....-. ..++....++.+++.+|..+|+|++|+.++.+++.
T Consensus 266 ~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~ 345 (457)
T 1kt0_A 266 EQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALG 345 (457)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 34455566777888899999999999999876422100 01234467889999999999999999999999988
Q ss_pred HHHHhcCCCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchHH
Q 014710 343 VYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMK 398 (420)
Q Consensus 343 ~~~~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~~ 398 (420)
+ .|.....++++|.++..+|++++|+..|++|+++ .|+++...
T Consensus 346 ~--------~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l-----~P~~~~a~ 388 (457)
T 1kt0_A 346 L--------DSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEV-----NPQNKAAR 388 (457)
T ss_dssp H--------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT-----C----CHH
T ss_pred c--------CCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHh-----CCCCHHHH
Confidence 6 3455778999999999999999999999999875 44555443
No 94
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.20 E-value=7.3e-05 Score=71.17 Aligned_cols=124 Identities=14% Similarity=0.067 Sum_probs=99.7
Q ss_pred HHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCCh-hHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHH
Q 014710 278 KTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSV-NLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLG 356 (420)
Q Consensus 278 ~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~-~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~ 356 (420)
.+......|++++|+..+++++... .+.++ ....+...++.++...|++++|..++++++.+.... ++....+
T Consensus 20 ~a~~~~~~g~~~~A~~~~~~al~~~----~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~ 93 (373)
T 1hz4_A 20 RAQVAINDGNPDEAERLAKLALEEL----PPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQH--DVWHYAL 93 (373)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTC----CTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT--TCHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHcC----CCCchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhc--CcHHHHH
Confidence 3444566899999999999987643 33333 356678899999999999999999999999988763 3345667
Q ss_pred HHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHH
Q 014710 357 LQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEA 407 (420)
Q Consensus 357 ~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~~~~~~~l~~~ 407 (420)
..+..+|.++...|++++|+.++++++++.....++++|....+...++.+
T Consensus 94 ~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~ 144 (373)
T 1hz4_A 94 WSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQL 144 (373)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHH
Confidence 889999999999999999999999999999988777777766666666555
No 95
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.18 E-value=2.5e-05 Score=72.31 Aligned_cols=109 Identities=16% Similarity=0.104 Sum_probs=87.5
Q ss_pred HHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHh-hcHHHHHHHHHHhHHHHHHhcCCCC
Q 014710 274 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMEL-EDWKEALAYCQLTIPVYQRVYPQFH 352 (420)
Q Consensus 274 ~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~-g~~~~A~~~~~~~l~~~~~~~g~~h 352 (420)
.....+..+...|++++|+..+++++.+.... ........++.+++.+|... |++++|+.++++++.+.... ...
T Consensus 79 ~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~--g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~--~~~ 154 (292)
T 1qqe_A 79 TYVEAYKCFKSGGNSVNAVDSLENAIQIFTHR--GQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQD--QSV 154 (292)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT--TCH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhC--CCh
Confidence 33445555677899999999999999886542 22333567889999999996 99999999999999987643 223
Q ss_pred hHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHH
Q 014710 353 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEIL 386 (420)
Q Consensus 353 p~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~ 386 (420)
+..+..+.++|.++..+|++++|+.++++|+++.
T Consensus 155 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 188 (292)
T 1qqe_A 155 ALSNKCFIKCADLKALDGQYIEASDIYSKLIKSS 188 (292)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 4456789999999999999999999999999864
No 96
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=98.17 E-value=2.1e-05 Score=66.86 Aligned_cols=91 Identities=18% Similarity=0.113 Sum_probs=73.0
Q ss_pred HhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHH
Q 014710 279 TLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQ 358 (420)
Q Consensus 279 a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~ 358 (420)
+......++++.++..++++... .|.+ ..+...++.++...|++++|++++++++.+ +|.....
T Consensus 80 ~~~~~~~~~~~~a~~~~~~a~~~-----~~~~---~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~--------~p~~~~~ 143 (184)
T 3vtx_A 80 GSANFMIDEKQAAIDALQRAIAL-----NTVY---ADAYYKLGLVYDSMGEHDKAIEAYEKTISI--------KPGFIRA 143 (184)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHh-----Cccc---hHHHHHHHHHHHHhCCchhHHHHHHHHHHh--------cchhhhH
Confidence 33445567788888887777653 3444 356678899999999999999999998876 4566778
Q ss_pred HHHhhHHHHhhcChHHHHHHHHHHHHH
Q 014710 359 YYTCGKLEWFLGDTENAIKSMTEAVEI 385 (420)
Q Consensus 359 l~~La~~~~~~g~~~eA~~~l~~A~~i 385 (420)
++.+|.++..+|++++|+.++++|+++
T Consensus 144 ~~~lg~~~~~~g~~~~A~~~~~~al~~ 170 (184)
T 3vtx_A 144 YQSIGLAYEGKGLRDEAVKYFKKALEK 170 (184)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHhC
Confidence 999999999999999999999999875
No 97
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=98.15 E-value=4.9e-05 Score=71.11 Aligned_cols=118 Identities=18% Similarity=0.179 Sum_probs=92.7
Q ss_pred HHHHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChh-HHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCC
Q 014710 272 VNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVN-LMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQ 350 (420)
Q Consensus 272 ~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~-~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~ 350 (420)
+......+..+...|++++|+..+++++.. .|.++. ...++..++.++...|++++|+.++++++..
T Consensus 234 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~-----~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~------- 301 (359)
T 3ieg_A 234 LNKLIESAEELIRDGRYTDATSKYESVMKT-----EPSVAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQM------- 301 (359)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CCSSHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhc-----CCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh-------
Confidence 334445566778889999999999999765 355544 4467788999999999999999999999876
Q ss_pred CChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHH
Q 014710 351 FHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEA 407 (420)
Q Consensus 351 ~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~~~~~~~l~~~ 407 (420)
+|.....++.+|.++...|++++|+.++++|+++ .|+++.....+..+...
T Consensus 302 -~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~-----~p~~~~~~~~l~~~~~~ 352 (359)
T 3ieg_A 302 -EPDNVNALKDRAEAYLIEEMYDEAIQDYEAAQEH-----NENDQQIREGLEKAQRL 352 (359)
T ss_dssp -CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT-----CTTCHHHHHHHHHHHHH
T ss_pred -CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc-----CCCChHHHHHHHHHHHH
Confidence 3545678999999999999999999999999975 57777665554444443
No 98
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=98.15 E-value=4e-05 Score=72.46 Aligned_cols=119 Identities=18% Similarity=0.182 Sum_probs=93.1
Q ss_pred HHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHH
Q 014710 277 KKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLG 356 (420)
Q Consensus 277 ~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~ 356 (420)
..+..+...|++++|+..+++++.. .|.+ ..++..++.++...|++++|+.++++++.. +|...
T Consensus 222 ~l~~~~~~~g~~~~A~~~~~~al~~-----~~~~---~~~~~~l~~~~~~~g~~~~A~~~~~~al~~--------~~~~~ 285 (368)
T 1fch_A 222 GLGVLFNLSGEYDKAVDCFTAALSV-----RPND---YLLWNKLGATLANGNQSEEAVAAYRRALEL--------QPGYI 285 (368)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHh-----CcCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCcH
Confidence 3455566789999999999999775 3444 457788999999999999999999999876 35556
Q ss_pred HHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCC---CCchHHHHHHHHHHHHHHH
Q 014710 357 LQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGT---NSPFMKELILKLEEAQAEA 411 (420)
Q Consensus 357 ~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~---~h~~~~~~~~~l~~~~~~~ 411 (420)
..++.+|.++..+|++++|+.++++|+.+.....|+ .++....+...++.+...+
T Consensus 286 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 343 (368)
T 1fch_A 286 RSRYNLGISCINLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLALSML 343 (368)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC------CCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCccccccchhhHHHHHHHHHHHHh
Confidence 789999999999999999999999999988766443 3455566666676665544
No 99
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=98.13 E-value=2.9e-05 Score=68.46 Aligned_cols=97 Identities=16% Similarity=0.093 Sum_probs=77.6
Q ss_pred HHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHh-----------hcHHHHHHHHHHhHH
Q 014710 274 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMEL-----------EDWKEALAYCQLTIP 342 (420)
Q Consensus 274 ~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~-----------g~~~~A~~~~~~~l~ 342 (420)
.....+......|++++|+..+++++++ .|.+ ..++..++.++... |++++|+..+++++.
T Consensus 41 a~~~lg~~~~~~g~~~~A~~~~~~al~~-----~P~~---~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~ 112 (217)
T 2pl2_A 41 ALYWLARTQLKLGLVNPALENGKTLVAR-----TPRY---LGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAER 112 (217)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCc---HHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHH
Confidence 3444556667789999999999999875 3444 45677889999999 999999999999987
Q ss_pred HHHHhcCCCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHH
Q 014710 343 VYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEIL 386 (420)
Q Consensus 343 ~~~~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~ 386 (420)
. .|.-...++.+|.++..+|++++|+..+++|+++-
T Consensus 113 ~--------~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 148 (217)
T 2pl2_A 113 V--------NPRYAPLHLQRGLVYALLGERDKAEASLKQALALE 148 (217)
T ss_dssp H--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred h--------CcccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc
Confidence 6 35555677888899888999999999888888764
No 100
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=98.11 E-value=7.2e-05 Score=66.50 Aligned_cols=114 Identities=15% Similarity=0.126 Sum_probs=89.1
Q ss_pred HHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChH
Q 014710 275 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 354 (420)
Q Consensus 275 l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~ 354 (420)
....+..+...|++++|+..+++++.. .|.+ ..++..++.++...|++++|+.++++++.. .|.
T Consensus 142 ~~~~~~~~~~~~~~~~A~~~~~~a~~~-----~~~~---~~~~~~l~~~~~~~~~~~~A~~~~~~al~~--------~~~ 205 (258)
T 3uq3_A 142 ARLEGKEYFTKSDWPNAVKAYTEMIKR-----APED---ARGYSNRAAALAKLMSFPEAIADCNKAIEK--------DPN 205 (258)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTT
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhc-----Cccc---HHHHHHHHHHHHHhCCHHHHHHHHHHHHHh--------CHH
Confidence 344555667789999999999999875 2444 467788999999999999999999999875 244
Q ss_pred HHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHH
Q 014710 355 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEE 406 (420)
Q Consensus 355 ~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~~~~~~~l~~ 406 (420)
....++.+|.++..+|++++|..++++|+++..... +.|...++...|++
T Consensus 206 ~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~--~~p~~~~~~~~l~~ 255 (258)
T 3uq3_A 206 FVRAYIRKATAQIAVKEYASALETLDAARTKDAEVN--NGSSAREIDQLYYK 255 (258)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH--TTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhChhhc--CCCchHHHHHHHHH
Confidence 567899999999999999999999999999875542 34444555555544
No 101
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=98.11 E-value=5.4e-05 Score=63.92 Aligned_cols=117 Identities=7% Similarity=0.010 Sum_probs=91.5
Q ss_pred HHHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHH-HHHhhcH--HHHHHHHHHhHHHHHHhcC
Q 014710 273 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKI-LMELEDW--KEALAYCQLTIPVYQRVYP 349 (420)
Q Consensus 273 ~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~-~~~~g~~--~~A~~~~~~~l~~~~~~~g 349 (420)
......+..+...|++++|+..+++++... |.+ ..++..++.+ +...|++ ++|+.++++++..
T Consensus 45 ~~~~~lg~~~~~~~~~~~A~~~~~~al~~~-----p~~---~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~------ 110 (177)
T 2e2e_A 45 EQWALLGEYYLWQNDYSNSLLAYRQALQLR-----GEN---AELYAALATVLYYQASQHMTAQTRAMIDKALAL------ 110 (177)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-----CSC---HHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHH------
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcC-----CCC---HHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHh------
Confidence 344455666777899999999999998753 444 3466778888 7889998 9999999998875
Q ss_pred CCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHH
Q 014710 350 QFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAE 410 (420)
Q Consensus 350 ~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~~~~~~~l~~~~~~ 410 (420)
.|.-...++.+|.++...|++++|+.++++++++ .|+++....+...+.+++.-
T Consensus 111 --~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~-----~p~~~~~~~~~~~i~~~~~~ 164 (177)
T 2e2e_A 111 --DSNEITALMLLASDAFMQANYAQAIELWQKVMDL-----NSPRINRTQLVESINMAKLL 164 (177)
T ss_dssp --CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT-----CCTTSCHHHHHHHHHHHHHH
T ss_pred --CCCcHHHHHHHHHHHHHcccHHHHHHHHHHHHhh-----CCCCccHHHHHHHHHHHHHh
Confidence 2444567899999999999999999999999865 55667777777777766543
No 102
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=98.10 E-value=4.3e-05 Score=67.40 Aligned_cols=113 Identities=19% Similarity=0.112 Sum_probs=86.9
Q ss_pred HHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChh----HHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcC
Q 014710 274 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVN----LMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYP 349 (420)
Q Consensus 274 ~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~----~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g 349 (420)
.....+..+...|++++|+..+++++.. .|.++. +..++..++.++...|++++|++++++++..
T Consensus 78 ~~~~l~~~~~~~~~~~~A~~~~~~al~~-----~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~------ 146 (228)
T 4i17_A 78 AYIGKSAAYRDMKNNQEYIATLTEGIKA-----VPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDV------ 146 (228)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH-----STTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTS------
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHH-----CCCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhc------
Confidence 3444566667789999999999999875 355553 4467889999999999999999999998875
Q ss_pred CCChH--HHHHHHHhhHHHHhhcCh---------------------------HHHHHHHHHHHHHHHHhcCCCCchHHHH
Q 014710 350 QFHPL--LGLQYYTCGKLEWFLGDT---------------------------ENAIKSMTEAVEILRITHGTNSPFMKEL 400 (420)
Q Consensus 350 ~~hp~--~~~~l~~La~~~~~~g~~---------------------------~eA~~~l~~A~~i~~~~~G~~h~~~~~~ 400 (420)
+|. ....++.||.++...|+. ++|+.++++|+++ .|+++.+..+
T Consensus 147 --~p~~~~~~~~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l-----~p~~~~~~~~ 219 (228)
T 4i17_A 147 --TSKKWKTDALYSLGVLFYNNGADVLRKATPLASSNKEKYASEKAKADAAFKKAVDYLGEAVTL-----SPNRTEIKQM 219 (228)
T ss_dssp --SCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----CTTCHHHHHH
T ss_pred --CCCcccHHHHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc-----CCCCHHHHHH
Confidence 577 788899999999888887 6777777777764 5777766655
Q ss_pred HHHH
Q 014710 401 ILKL 404 (420)
Q Consensus 401 ~~~l 404 (420)
+..+
T Consensus 220 l~~i 223 (228)
T 4i17_A 220 QDQV 223 (228)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4433
No 103
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=98.09 E-value=1.6e-05 Score=75.56 Aligned_cols=118 Identities=14% Similarity=0.160 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChh--------------HHHHHHHHHHHHHHhhcHHHHH
Q 014710 269 ASEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVN--------------LMQTREKLIKILMELEDWKEAL 334 (420)
Q Consensus 269 ~~~~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~--------------~~~~~~~L~~~~~~~g~~~~A~ 334 (420)
.+........+..++..|++++|+..|++++.... .+.. ...++.+++.++...|+|++|+
T Consensus 176 ~~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p-----~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~ 250 (338)
T 2if4_A 176 IGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMG-----DDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAI 250 (338)
T ss_dssp HHHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSC-----HHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhc-----cchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 34455566778888899999999999999987532 2210 1137889999999999999999
Q ss_pred HHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHH
Q 014710 335 AYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKL 404 (420)
Q Consensus 335 ~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~~~~~~~l 404 (420)
.++++++.+ +|.-...++++|.++..+|++++|+..|++|+++ .|+++.....+..+
T Consensus 251 ~~~~~al~~--------~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l-----~p~~~~a~~~L~~l 307 (338)
T 2if4_A 251 GHCNIVLTE--------EEKNPKALFRRGKAKAELGQMDSARDDFRKAQKY-----APDDKAIRRELRAL 307 (338)
T ss_dssp HHHHHHHHH--------CTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC--------------------
T ss_pred HHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH-----CCCCHHHHHHHHHH
Confidence 999999875 3555678999999999999999999999999875 35555554444333
No 104
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=98.09 E-value=1.6e-05 Score=60.94 Aligned_cols=93 Identities=17% Similarity=0.098 Sum_probs=74.4
Q ss_pred HhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHH
Q 014710 279 TLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQ 358 (420)
Q Consensus 279 a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~ 358 (420)
+..+...|++++|+..+++++.. .|.+ ..++..++.++...|++++|++++++++.. .| . ......
T Consensus 13 ~~~~~~~~~~~~A~~~~~~a~~~-----~~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~----~~-~-~~~~~~ 78 (112)
T 2kck_A 13 GVLQYDAGNYTESIDLFEKAIQL-----DPEE---SKYWLMKGKALYNLERYEEAVDCYNYVINV----IE-D-EYNKDV 78 (112)
T ss_dssp HHHHHSSCCHHHHHHHHHHHHHH-----CCCC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHT----SC-C-TTCHHH
T ss_pred HHHHHHhhhHHHHHHHHHHHHHh-----CcCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHh----Cc-c-cchHHH
Confidence 44556789999999999999765 2443 456778999999999999999999998765 22 2 114568
Q ss_pred HHHhhHHHHhh-cChHHHHHHHHHHHHH
Q 014710 359 YYTCGKLEWFL-GDTENAIKSMTEAVEI 385 (420)
Q Consensus 359 l~~La~~~~~~-g~~~eA~~~l~~A~~i 385 (420)
++.+|.++..+ |++++|+.++++++..
T Consensus 79 ~~~l~~~~~~~~~~~~~A~~~~~~~~~~ 106 (112)
T 2kck_A 79 WAAKADALRYIEGKEVEAEIAEARAKLE 106 (112)
T ss_dssp HHHHHHHHTTCSSCSHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHhhc
Confidence 89999999999 9999999999998653
No 105
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=98.08 E-value=3.1e-05 Score=68.27 Aligned_cols=101 Identities=15% Similarity=0.111 Sum_probs=82.6
Q ss_pred HHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHH
Q 014710 276 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL 355 (420)
Q Consensus 276 ~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~ 355 (420)
...+..+...|++++|+..+++++.. .|.+ ..++..++.++...|++++|+.++++++.. .|..
T Consensus 9 ~~lg~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~a~~~lg~~~~~~g~~~~A~~~~~~al~~--------~P~~ 72 (217)
T 2pl2_A 9 LRLGVQLYALGRYDAALTLFERALKE-----NPQD---PEALYWLARTQLKLGLVNPALENGKTLVAR--------TPRY 72 (217)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTT-----SSSC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCc
Confidence 44555667789999999999998753 3444 566788999999999999999999999876 3555
Q ss_pred HHHHHHhhHHHHhh-----------cChHHHHHHHHHHHHHHHHhcCCCCchH
Q 014710 356 GLQYYTCGKLEWFL-----------GDTENAIKSMTEAVEILRITHGTNSPFM 397 (420)
Q Consensus 356 ~~~l~~La~~~~~~-----------g~~~eA~~~l~~A~~i~~~~~G~~h~~~ 397 (420)
...++.+|.++..+ |++++|+..+++|+++ .|+++..
T Consensus 73 ~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~-----~P~~~~~ 120 (217)
T 2pl2_A 73 LGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERV-----NPRYAPL 120 (217)
T ss_dssp HHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHH-----CTTCHHH
T ss_pred HHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHh-----CcccHHH
Confidence 67889999999999 9999999999999986 4555544
No 106
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=98.06 E-value=0.0001 Score=65.23 Aligned_cols=123 Identities=9% Similarity=-0.010 Sum_probs=91.2
Q ss_pred HHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHH------------------hhcHHHHHH
Q 014710 274 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILME------------------LEDWKEALA 335 (420)
Q Consensus 274 ~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~------------------~g~~~~A~~ 335 (420)
.....+..+...|++++|+..++++++. .|.++....++..++.++.. .|++++|+.
T Consensus 43 a~~~lg~~~~~~~~~~~A~~~~~~~l~~-----~P~~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~ 117 (225)
T 2yhc_A 43 VQLDLIYAYYKNADLPLAQAAIDRFIRL-----NPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFS 117 (225)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHH-----CcCCCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHH
Confidence 3445566677889999999999999864 57887776777777777765 578999999
Q ss_pred HHHHhHHHHHHhcCCCChHHH--------------HHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchHHHHH
Q 014710 336 YCQLTIPVYQRVYPQFHPLLG--------------LQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELI 401 (420)
Q Consensus 336 ~~~~~l~~~~~~~g~~hp~~~--------------~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~~~~~ 401 (420)
.+++++..+ |+++... ...+.+|.++...|++++|+..++++++.. |++|...+.+
T Consensus 118 ~~~~~l~~~-----P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~-----p~~~~~~~a~ 187 (225)
T 2yhc_A 118 DFSKLVRGY-----PNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDY-----PDTQATRDAL 187 (225)
T ss_dssp HHHHHHTTC-----TTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS-----TTSHHHHHHH
T ss_pred HHHHHHHHC-----cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHC-----cCCCccHHHH
Confidence 988876543 3444332 223678899999999999999999998764 5667666777
Q ss_pred HHHHHHHHHH
Q 014710 402 LKLEEAQAEA 411 (420)
Q Consensus 402 ~~l~~~~~~~ 411 (420)
..++.+...+
T Consensus 188 ~~l~~~~~~~ 197 (225)
T 2yhc_A 188 PLMENAYRQM 197 (225)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHc
Confidence 7777664443
No 107
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=98.05 E-value=1.9e-05 Score=74.63 Aligned_cols=112 Identities=15% Similarity=0.124 Sum_probs=92.5
Q ss_pred HHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhc---CC
Q 014710 274 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVY---PQ 350 (420)
Q Consensus 274 ~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~---g~ 350 (420)
.....+..+...|++++|+..+++++.. .|.+ ..++..++.++...|++++|+.++++++.+..... +.
T Consensus 253 ~~~~l~~~~~~~g~~~~A~~~~~~al~~-----~~~~---~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 324 (368)
T 1fch_A 253 LWNKLGATLANGNQSEEAVAAYRRALEL-----QPGY---IRSRYNLGISCINLGAHREAVEHFLEALNMQRKSRGPRGE 324 (368)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC------
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCc---HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCcccc
Confidence 3344555667789999999999999775 3333 46778899999999999999999999998876552 34
Q ss_pred CChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCC
Q 014710 351 FHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTN 393 (420)
Q Consensus 351 ~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~ 393 (420)
.++.....+..||.++..+|++++|...++++++++...+|.+
T Consensus 325 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~l~~~~~~~~~~ 367 (368)
T 1fch_A 325 GGAMSENIWSTLRLALSMLGQSDAYGAADARDLSTLLTMFGLP 367 (368)
T ss_dssp CCCCCHHHHHHHHHHHHHHTCGGGHHHHHTTCHHHHHHHTTCC
T ss_pred ccchhhHHHHHHHHHHHHhCChHhHHHhHHHHHHHHHHhcCCC
Confidence 5677788999999999999999999999999999999998865
No 108
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=98.04 E-value=6.6e-05 Score=66.75 Aligned_cols=104 Identities=10% Similarity=0.087 Sum_probs=88.1
Q ss_pred HHHHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCC
Q 014710 272 VNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQF 351 (420)
Q Consensus 272 ~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~ 351 (420)
.+.+...+......|++++|+..+++++... .+ ..++..++.++...|++++|+.++++++...... ++.
T Consensus 5 a~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~------~~---~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~-~~~ 74 (258)
T 3uq3_A 5 ADKEKAEGNKFYKARQFDEAIEHYNKAWELH------KD---ITYLNNRAAAEYEKGEYETAISTLNDAVEQGREM-RAD 74 (258)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS------CC---THHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-TCC
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhh------cc---HHHHHHHHHHHHHcccHHHHHHHHHHHHHhCccc-ccc
Confidence 4555666777788999999999999998763 22 4577889999999999999999999999876543 456
Q ss_pred ChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHH
Q 014710 352 HPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 385 (420)
Q Consensus 352 hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i 385 (420)
++..+..++.+|.++...|++++|+.++++++.+
T Consensus 75 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 108 (258)
T 3uq3_A 75 YKVISKSFARIGNAYHKLGDLKKTIEYYQKSLTE 108 (258)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhc
Confidence 7777999999999999999999999999999985
No 109
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.04 E-value=3.9e-05 Score=63.93 Aligned_cols=100 Identities=13% Similarity=0.158 Sum_probs=72.7
Q ss_pred ChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcH----------HHHHHHHHHhHHHHHHhcCCCChHHH
Q 014710 287 NHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDW----------KEALAYCQLTIPVYQRVYPQFHPLLG 356 (420)
Q Consensus 287 ~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~----------~~A~~~~~~~l~~~~~~~g~~hp~~~ 356 (420)
.|++|++.+++++.+ .|.+ ..++.+++.++...+++ ++|+..++++|.+ .|...
T Consensus 17 ~feeA~~~~~~Ai~l-----~P~~---aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~l--------dP~~~ 80 (158)
T 1zu2_A 17 LFEQIRQDAENTYKS-----NPLD---ADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLI--------DPKKD 80 (158)
T ss_dssp HHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH--------CTTCH
T ss_pred HHHHHHHHHHHHHHH-----CCCC---HHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHh--------CcCcH
Confidence 356677777777654 3444 45666777777777654 5788887777776 47777
Q ss_pred HHHHHhhHHHHhhc-----------ChHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHH
Q 014710 357 LQYYTCGKLEWFLG-----------DTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEA 407 (420)
Q Consensus 357 ~~l~~La~~~~~~g-----------~~~eA~~~l~~A~~i~~~~~G~~h~~~~~~~~~l~~~ 407 (420)
.++++||.+|..+| ++++|+.+|++|+++ -|+++.+...+....++
T Consensus 81 ~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l-----~P~~~~y~~al~~~~ka 137 (158)
T 1zu2_A 81 EAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDE-----QPDNTHYLKSLEMTAKA 137 (158)
T ss_dssp HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH-----CTTCHHHHHHHHHHHTH
T ss_pred HHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHh-----CCCCHHHHHHHHHHHhC
Confidence 88999999998875 899999999999986 67788777665554443
No 110
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=98.02 E-value=0.00016 Score=62.76 Aligned_cols=94 Identities=11% Similarity=0.042 Sum_probs=65.4
Q ss_pred HHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHh-hcHHHHHHHHHHhHHHHHHhcCCCChHHH
Q 014710 278 KTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMEL-EDWKEALAYCQLTIPVYQRVYPQFHPLLG 356 (420)
Q Consensus 278 ~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~-g~~~~A~~~~~~~l~~~~~~~g~~hp~~~ 356 (420)
.+..+...|++++|++.+++++.. .|.+ ..++..++.++... |++++|+.++++++. .+.+|...
T Consensus 48 l~~~~~~~~~~~~A~~~~~~a~~~-----~~~~---~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~------~~~~~~~~ 113 (225)
T 2vq2_A 48 RAEIYQYLKVNDKAQESFRQALSI-----KPDS---AEINNNYGWFLCGRLNRPAESMAYFDKALA------DPTYPTPY 113 (225)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHTTTCCHHHHHHHHHHHHT------STTCSCHH
T ss_pred HHHHHHHcCChHHHHHHHHHHHHh-----CCCC---hHHHHHHHHHHHHhcCcHHHHHHHHHHHHc------CcCCcchH
Confidence 344455667777777777777653 2333 34556777777788 888888887777765 24556667
Q ss_pred HHHHHhhHHHHhhcChHHHHHHHHHHHHH
Q 014710 357 LQYYTCGKLEWFLGDTENAIKSMTEAVEI 385 (420)
Q Consensus 357 ~~l~~La~~~~~~g~~~eA~~~l~~A~~i 385 (420)
..++.+|.++...|++++|+.+++++++.
T Consensus 114 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~ 142 (225)
T 2vq2_A 114 IANLNKGICSAKQGQFGLAEAYLKRSLAA 142 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 77788888888888888888888887664
No 111
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=98.00 E-value=5.2e-05 Score=66.86 Aligned_cols=97 Identities=16% Similarity=0.112 Sum_probs=80.3
Q ss_pred HHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCCh
Q 014710 274 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 353 (420)
Q Consensus 274 ~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp 353 (420)
.+...+..+...|++++|++.+++++.... +.+. .++..++.++...|++++|+.++++++.. .|
T Consensus 9 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~~----~~~~---~~~~~~~~~~~~~~~~~~A~~~~~~al~~--------~p 73 (228)
T 4i17_A 9 QLKNEGNDALNAKNYAVAFEKYSEYLKLTN----NQDS---VTAYNCGVCADNIKKYKEAADYFDIAIKK--------NY 73 (228)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHTT----TCCH---HHHHHHHHHHHHTTCHHHHHHHHHHHHHT--------TC
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHhccC----CCCc---HHHHHHHHHHHHhhcHHHHHHHHHHHHHh--------Cc
Confidence 445566677788999999999999987531 1333 45566999999999999999999998843 56
Q ss_pred HHHHHHHHhhHHHHhhcChHHHHHHHHHHHHH
Q 014710 354 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 385 (420)
Q Consensus 354 ~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i 385 (420)
.....++.+|.++..+|++++|+..+++|+++
T Consensus 74 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~ 105 (228)
T 4i17_A 74 NLANAYIGKSAAYRDMKNNQEYIATLTEGIKA 105 (228)
T ss_dssp SHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHcccHHHHHHHHHHHHHH
Confidence 67888999999999999999999999999875
No 112
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=98.00 E-value=8.8e-05 Score=66.08 Aligned_cols=91 Identities=9% Similarity=0.051 Sum_probs=54.1
Q ss_pred hhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHH
Q 014710 281 ALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYY 360 (420)
Q Consensus 281 ~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~ 360 (420)
.+...|++++|++.+++++.. .|.+ ..++..++.++...|++++|++++++++. .+.+|.....++
T Consensus 80 ~~~~~~~~~~A~~~~~~a~~~-----~~~~---~~~~~~la~~~~~~g~~~~A~~~~~~~~~------~~~~~~~~~~~~ 145 (252)
T 2ho1_A 80 VFQTEMEPKLADEEYRKALAS-----DSRN---ARVLNNYGGFLYEQKRYEEAYQRLLEASQ------DTLYPERSRVFE 145 (252)
T ss_dssp HHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHTT------CTTCTTHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHH-----CcCc---HHHHHHHHHHHHHHhHHHHHHHHHHHHHh------CccCcccHHHHH
Confidence 334455666666666555443 1222 34455566666666666666666666554 234555666666
Q ss_pred HhhHHHHhhcChHHHHHHHHHHHHH
Q 014710 361 TCGKLEWFLGDTENAIKSMTEAVEI 385 (420)
Q Consensus 361 ~La~~~~~~g~~~eA~~~l~~A~~i 385 (420)
.+|.++...|++++|+.+++++++.
T Consensus 146 ~la~~~~~~g~~~~A~~~~~~~~~~ 170 (252)
T 2ho1_A 146 NLGLVSLQMKKPAQAKEYFEKSLRL 170 (252)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 6777777777777777777766654
No 113
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=98.00 E-value=0.00018 Score=56.48 Aligned_cols=91 Identities=24% Similarity=0.350 Sum_probs=69.3
Q ss_pred HhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHH
Q 014710 279 TLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQ 358 (420)
Q Consensus 279 a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~ 358 (420)
+..+...|++++|+..+++++.. +|.+ ..++..++.++...|++++|+.++++++.. .|.....
T Consensus 8 ~~~~~~~~~~~~A~~~~~~~~~~-----~~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~ 71 (136)
T 2fo7_A 8 GNAYYKQGDYDEAIEYYQKALEL-----DPRS---AEAWYNLGNAYYKQGDYDEAIEYYQKALEL--------DPRSAEA 71 (136)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------CTTCHHH
T ss_pred HHHHHHcCcHHHHHHHHHHHHHc-----CCcc---hhHHHHHHHHHHHhcCHHHHHHHHHHHHHH--------CCCchHH
Confidence 44455668889999988888654 2333 445667888888999999999998887654 1333456
Q ss_pred HHHhhHHHHhhcChHHHHHHHHHHHHH
Q 014710 359 YYTCGKLEWFLGDTENAIKSMTEAVEI 385 (420)
Q Consensus 359 l~~La~~~~~~g~~~eA~~~l~~A~~i 385 (420)
++.+|.++...|++++|+.++++++.+
T Consensus 72 ~~~l~~~~~~~~~~~~A~~~~~~~~~~ 98 (136)
T 2fo7_A 72 WYNLGNAYYKQGDYDEAIEYYQKALEL 98 (136)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 788899999999999999999998875
No 114
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=98.00 E-value=5e-05 Score=60.81 Aligned_cols=75 Identities=11% Similarity=0.071 Sum_probs=65.6
Q ss_pred CChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHH
Q 014710 309 FSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRI 388 (420)
Q Consensus 309 ~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~ 388 (420)
-+|.....+.+++..+...|+|++|++++++++.+ .|.-...++++|.++..+|++++|+..+++|+++
T Consensus 8 inP~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~--- 76 (126)
T 4gco_A 8 INPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKR--------DPENAILYSNRAACLTKLMEFQRALDDCDTCIRL--- 76 (126)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---
T ss_pred HCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHh---
Confidence 47888899999999999999999999999999876 4555778999999999999999999999999975
Q ss_pred hcCCCCch
Q 014710 389 THGTNSPF 396 (420)
Q Consensus 389 ~~G~~h~~ 396 (420)
.|+++.
T Consensus 77 --~p~~~~ 82 (126)
T 4gco_A 77 --DSKFIK 82 (126)
T ss_dssp --CTTCHH
T ss_pred --hhhhhH
Confidence 555553
No 115
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=97.99 E-value=4.6e-05 Score=66.18 Aligned_cols=104 Identities=10% Similarity=-0.058 Sum_probs=82.2
Q ss_pred HHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhc------
Q 014710 275 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVY------ 348 (420)
Q Consensus 275 l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~------ 348 (420)
....+..+...|++++|++.+++++.. .|.+ ..++..++.++...|++++|++++++++......-
T Consensus 40 ~~~lg~~~~~~g~~~~A~~~~~~al~~-----~~~~---~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~ 111 (213)
T 1hh8_A 40 CFNIGCMYTILKNMTEAEKAFTRSINR-----DKHL---AVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKI 111 (213)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGG
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHh-----Cccc---hHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHH
Confidence 344555667789999999999999775 2333 56778999999999999999999999876431100
Q ss_pred -C-CCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHH
Q 014710 349 -P-QFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEIL 386 (420)
Q Consensus 349 -g-~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~ 386 (420)
| ..+|.....++++|.++..+|++++|+.++++|+.+.
T Consensus 112 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 151 (213)
T 1hh8_A 112 LGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMK 151 (213)
T ss_dssp GTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred hccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcC
Confidence 0 1456778999999999999999999999999998763
No 116
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=97.99 E-value=0.00013 Score=64.89 Aligned_cols=93 Identities=9% Similarity=-0.057 Sum_probs=73.9
Q ss_pred HHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHH
Q 014710 278 KTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGL 357 (420)
Q Consensus 278 ~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~ 357 (420)
.+..+...|++++|++.+++++. .+.++....++..++.++...|++++|+.++++++.. .|....
T Consensus 111 la~~~~~~g~~~~A~~~~~~~~~------~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~--------~~~~~~ 176 (252)
T 2ho1_A 111 YGGFLYEQKRYEEAYQRLLEASQ------DTLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRL--------NRNQPS 176 (252)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHTT------CTTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CSCCHH
T ss_pred HHHHHHHHhHHHHHHHHHHHHHh------CccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc--------CcccHH
Confidence 34445667888888888887754 3456666778888999999999999999999988765 233356
Q ss_pred HHHHhhHHHHhhcChHHHHHHHHHHHH
Q 014710 358 QYYTCGKLEWFLGDTENAIKSMTEAVE 384 (420)
Q Consensus 358 ~l~~La~~~~~~g~~~eA~~~l~~A~~ 384 (420)
.++.+|.++...|++++|+.+++++++
T Consensus 177 ~~~~la~~~~~~g~~~~A~~~~~~~~~ 203 (252)
T 2ho1_A 177 VALEMADLLYKEREYVPARQYYDLFAQ 203 (252)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 788999999999999999999999876
No 117
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=97.99 E-value=5.6e-05 Score=58.96 Aligned_cols=84 Identities=17% Similarity=0.126 Sum_probs=67.5
Q ss_pred HHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHhh
Q 014710 290 EVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFL 369 (420)
Q Consensus 290 ~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~~ 369 (420)
+++..+++++. ..|.+ ..++..++.++...|++++|+.++++++.. .|.....++.||.++..+
T Consensus 3 ~a~~~~~~al~-----~~p~~---~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~la~~~~~~ 66 (115)
T 2kat_A 3 AITERLEAMLA-----QGTDN---MLLRFTLGKTYAEHEQFDAALPHLRAALDF--------DPTYSVAWKWLGKTLQGQ 66 (115)
T ss_dssp CHHHHHHHHHT-----TTCCC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-----hCCCc---HHHHHHHHHHHHHccCHHHHHHHHHHHHHH--------CCCcHHHHHHHHHHHHHc
Confidence 35566666654 23444 457788999999999999999999999875 344566889999999999
Q ss_pred cChHHHHHHHHHHHHHHHHh
Q 014710 370 GDTENAIKSMTEAVEILRIT 389 (420)
Q Consensus 370 g~~~eA~~~l~~A~~i~~~~ 389 (420)
|++++|+.+|++|+++....
T Consensus 67 g~~~~A~~~~~~al~~~~~~ 86 (115)
T 2kat_A 67 GDRAGARQAWESGLAAAQSR 86 (115)
T ss_dssp TCHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcccc
Confidence 99999999999999986553
No 118
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=97.98 E-value=0.00019 Score=59.98 Aligned_cols=92 Identities=14% Similarity=0.075 Sum_probs=70.1
Q ss_pred HHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHH
Q 014710 278 KTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGL 357 (420)
Q Consensus 278 ~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~ 357 (420)
.+......|++++|++.+++++.. .|.+ ..++..++.++...|++++|++++++++.. +|....
T Consensus 48 ~~~~~~~~~~~~~A~~~~~~~~~~-----~~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~ 111 (186)
T 3as5_A 48 LGIAYVKTGAVDRGTELLERSLAD-----APDN---VKVATVLGLTYVQVQKYDLAVPLLIKVAEA--------NPINFN 111 (186)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------CTTCHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHhc-----CCCC---HHHHHHHHHHHHHhcCHHHHHHHHHHHHhc--------CcHhHH
Confidence 344455678888898888888764 2333 455677888888899999999988888765 233456
Q ss_pred HHHHhhHHHHhhcChHHHHHHHHHHHHH
Q 014710 358 QYYTCGKLEWFLGDTENAIKSMTEAVEI 385 (420)
Q Consensus 358 ~l~~La~~~~~~g~~~eA~~~l~~A~~i 385 (420)
.+..+|.++...|++++|+.++++++..
T Consensus 112 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 139 (186)
T 3as5_A 112 VRFRLGVALDNLGRFDEAIDSFKIALGL 139 (186)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCcHHHHHHHHHHHHhc
Confidence 7788899999999999999999988875
No 119
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=97.97 E-value=7e-05 Score=67.48 Aligned_cols=102 Identities=13% Similarity=0.136 Sum_probs=82.2
Q ss_pred HHHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCC
Q 014710 273 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 352 (420)
Q Consensus 273 ~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~h 352 (420)
......+......|++++|+..+++++.. .|.+ ..++..++.++...|++++|+.++++++.. .
T Consensus 44 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~-----~~~~---~~~~~~la~~~~~~~~~~~A~~~~~~al~~--------~ 107 (275)
T 1xnf_A 44 QLLYERGVLYDSLGLRALARNDFSQALAI-----RPDM---PEVFNYLGIYLTQAGNFDAAYEAFDSVLEL--------D 107 (275)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CCCC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------C
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHc-----CCCc---HHHHHHHHHHHHHccCHHHHHHHHHHHHhc--------C
Confidence 33445566677789999999999999875 3444 456788999999999999999999999876 2
Q ss_pred hHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCc
Q 014710 353 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSP 395 (420)
Q Consensus 353 p~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~ 395 (420)
|.....++.+|.++...|++++|+.++++++++ .|+++
T Consensus 108 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~-----~~~~~ 145 (275)
T 1xnf_A 108 PTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQD-----DPNDP 145 (275)
T ss_dssp TTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCH
T ss_pred ccccHHHHHHHHHHHHhccHHHHHHHHHHHHHh-----CCCCh
Confidence 334578899999999999999999999999874 45555
No 120
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=97.96 E-value=0.00017 Score=70.18 Aligned_cols=113 Identities=18% Similarity=0.175 Sum_probs=90.9
Q ss_pred HHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChh-HHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCCh
Q 014710 275 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVN-LMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 353 (420)
Q Consensus 275 l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~-~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp 353 (420)
....+......|++++|+..+++++.. .|.++. ...++..++.++...|++++|+.++++++.. +|
T Consensus 260 ~~~~~~~~~~~g~~~~A~~~~~~~l~~-----~p~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~--------~p 326 (450)
T 2y4t_A 260 LIESAEELIRDGRYTDATSKYESVMKT-----EPSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQM--------EP 326 (450)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHH-----CCSSHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH--------CT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhc-----CCcchHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh--------Cc
Confidence 344566677789999999999999764 455655 3578899999999999999999999998876 45
Q ss_pred HHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHH
Q 014710 354 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLE 405 (420)
Q Consensus 354 ~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~~~~~~~l~ 405 (420)
.....++.+|.++...|++++|+.++++|+++ .|+++.+...+..+.
T Consensus 327 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~-----~p~~~~~~~~l~~~~ 373 (450)
T 2y4t_A 327 DNVNALKDRAEAYLIEEMYDEAIQDYETAQEH-----NENDQQIREGLEKAQ 373 (450)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT-----SSSCHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh-----CcchHHHHHHHHHHH
Confidence 55678999999999999999999999999873 567766655554433
No 121
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=97.90 E-value=8.9e-05 Score=64.33 Aligned_cols=93 Identities=17% Similarity=0.199 Sum_probs=77.4
Q ss_pred HHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChH
Q 014710 275 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 354 (420)
Q Consensus 275 l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~ 354 (420)
.+..+......|++++|+..+++++ .+ + ..++..++.++...|++++|+.++++++.. +|.
T Consensus 9 ~~~~g~~~~~~~~~~~A~~~~~~a~-------~~-~---~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--------~~~ 69 (213)
T 1hh8_A 9 LWNEGVLAADKKDWKGALDAFSAVQ-------DP-H---SRICFNIGCMYTILKNMTEAEKAFTRSINR--------DKH 69 (213)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTSS-------SC-C---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTT
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHc-------CC-C---hHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------Ccc
Confidence 4556667778899999998887662 22 2 458889999999999999999999999876 245
Q ss_pred HHHHHHHhhHHHHhhcChHHHHHHHHHHHHHH
Q 014710 355 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEIL 386 (420)
Q Consensus 355 ~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~ 386 (420)
....++.+|.++..+|++++|+..+++|+++.
T Consensus 70 ~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~ 101 (213)
T 1hh8_A 70 LAVAYFQRGMLYYQTEKYDLAIKDLKEALIQL 101 (213)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred chHHHHHHHHHHHHcccHHHHHHHHHHHHHhC
Confidence 56789999999999999999999999999864
No 122
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=97.90 E-value=0.00018 Score=62.79 Aligned_cols=115 Identities=17% Similarity=0.140 Sum_probs=80.0
Q ss_pred HHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChH---
Q 014710 278 KTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL--- 354 (420)
Q Consensus 278 ~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~--- 354 (420)
.+..+...|++++|+..+++++.+ .|.+ ..++..++.++...|++++|+.++++++.+- +.++.
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-----P~~~~a~~ 126 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQK-----APNN---VDCLEACAEMQVCRGQEKDALRMYEKILQLE-----ADNLAANI 126 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-----TTCHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHH-----CCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC-----CCCHHHHH
Confidence 566677889999999999999875 3554 4677889999999999999999999988752 22211
Q ss_pred -HH----------------------------HHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHH
Q 014710 355 -LG----------------------------LQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLE 405 (420)
Q Consensus 355 -~~----------------------------~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~~~~~~~l~ 405 (420)
+| ..++.+|..+..+|++++|+.+|++|+++. |+ +.....+..+.
T Consensus 127 ~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~-----P~-~~~~~~l~~i~ 200 (208)
T 3urz_A 127 FLGNYYYLTAEQEKKKLETDYKKLSSPTKMQYARYRDGLSKLFTTRYEKARNSLQKVILRF-----PS-TEAQKTLDKIL 200 (208)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTS-----CC-HHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-----CC-HHHHHHHHHHH
Confidence 11 123344555555677888888888887653 33 24555666666
Q ss_pred HHHHHH
Q 014710 406 EAQAEA 411 (420)
Q Consensus 406 ~~~~~~ 411 (420)
+.+.++
T Consensus 201 ~~~~~~ 206 (208)
T 3urz_A 201 RIEKEV 206 (208)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 666554
No 123
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=97.90 E-value=0.00015 Score=67.74 Aligned_cols=98 Identities=13% Similarity=0.105 Sum_probs=82.1
Q ss_pred HHHHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCC
Q 014710 272 VNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQF 351 (420)
Q Consensus 272 ~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~ 351 (420)
++.....+..+...|++++|+..+++++.. .|.+ ..++..++.++...|++++|+.++++++..
T Consensus 3 ~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~-----~p~~---~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~-------- 66 (359)
T 3ieg_A 3 VEKHLELGKKLLAAGQLADALSQFHAAVDG-----DPDN---YIAYYRRATVFLAMGKSKAALPDLTKVIAL-------- 66 (359)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-----Cccc---HHHHHHHHHHHHHccCHHHHHHHHHHHHHh--------
Confidence 345566677778899999999999999864 3444 457788999999999999999999999876
Q ss_pred ChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHH
Q 014710 352 HPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 385 (420)
Q Consensus 352 hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i 385 (420)
.|.....++.+|.++...|++++|+.++++++.+
T Consensus 67 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~ 100 (359)
T 3ieg_A 67 KMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKS 100 (359)
T ss_dssp CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTS
T ss_pred CCCcchHHHHHHHHHHHcCChHHHHHHHHHHHhc
Confidence 3444578999999999999999999999999865
No 124
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=97.89 E-value=0.00025 Score=61.44 Aligned_cols=94 Identities=10% Similarity=0.014 Sum_probs=72.4
Q ss_pred HHhhhhcC-CChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHH
Q 014710 278 KTLALTSC-GNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLG 356 (420)
Q Consensus 278 ~a~~~~~~-g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~ 356 (420)
.+..+... |++++|+..+++++. .|.++....++..++.++...|++++|+.++++++.. .|...
T Consensus 82 l~~~~~~~~~~~~~A~~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~--------~~~~~ 147 (225)
T 2vq2_A 82 YGWFLCGRLNRPAESMAYFDKALA------DPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAA--------QPQFP 147 (225)
T ss_dssp HHHHHHTTTCCHHHHHHHHHHHHT------STTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------STTCH
T ss_pred HHHHHHHhcCcHHHHHHHHHHHHc------CcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCc
Confidence 34445667 888888888888764 3456666778888889999999999999988888664 23335
Q ss_pred HHHHHhhHHHHhhcChHHHHHHHHHHHHH
Q 014710 357 LQYYTCGKLEWFLGDTENAIKSMTEAVEI 385 (420)
Q Consensus 357 ~~l~~La~~~~~~g~~~eA~~~l~~A~~i 385 (420)
..+..+|.++...|++++|..++++++.+
T Consensus 148 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 176 (225)
T 2vq2_A 148 PAFKELARTKMLAGQLGDADYYFKKYQSR 176 (225)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 67888899999999999999999888774
No 125
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=97.89 E-value=2.6e-05 Score=74.00 Aligned_cols=112 Identities=13% Similarity=0.117 Sum_probs=90.0
Q ss_pred HHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChH
Q 014710 275 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 354 (420)
Q Consensus 275 l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~ 354 (420)
....+..+...|++++|+..+++++.. +|.+ ..++..++.++...|++++|+.++++++.+.....++.++.
T Consensus 250 ~~~l~~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 321 (365)
T 4eqf_A 250 WNRLGATLANGDRSEEAVEAYTRALEI-----QPGF---IRSRYNLGISCINLGAYREAVSNFLTALSLQRKSRNQQQVP 321 (365)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHCC-------
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhc-----CCCc---hHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccCCCcccc
Confidence 344555667789999999999999875 3444 66788999999999999999999999999988877765554
Q ss_pred H----HHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCC
Q 014710 355 L----GLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNS 394 (420)
Q Consensus 355 ~----~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h 394 (420)
. +..+..|+.++..+|+.+.|.....++++++...+|.++
T Consensus 322 ~~~~~~~~~~~l~~~~~~~g~~~~a~~~~~~~l~~~~~~~~~~~ 365 (365)
T 4eqf_A 322 HPAISGNIWAALRIALSLMDQPELFQAANLGDLDVLLRAFNLDP 365 (365)
T ss_dssp -----CHHHHHHHHHHHHHTCHHHHHHHHTTCCGGGTTTTTCC-
T ss_pred hhhhHHHHHHHHHHHHHHcCcHHHHHHHHHhhHHHHHHhcCCCC
Confidence 4 778899999999999999999999999999999999874
No 126
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=97.88 E-value=3.9e-05 Score=58.63 Aligned_cols=71 Identities=25% Similarity=0.250 Sum_probs=59.9
Q ss_pred hhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHh
Q 014710 311 VNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRIT 389 (420)
Q Consensus 311 ~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~ 389 (420)
|.-..++..++.++...|++++|+.++++++.. .|.....++.||.++..+|++++|+..|++|+++....
T Consensus 4 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--------~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~ 74 (100)
T 3ma5_A 4 PEDPFTRYALAQEHLKHDNASRALALFEELVET--------DPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREE 74 (100)
T ss_dssp -CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------STTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcC
Confidence 334466788999999999999999999999876 24445589999999999999999999999999986653
No 127
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=97.87 E-value=0.0002 Score=56.26 Aligned_cols=92 Identities=24% Similarity=0.339 Sum_probs=73.3
Q ss_pred HHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHH
Q 014710 278 KTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGL 357 (420)
Q Consensus 278 ~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~ 357 (420)
.+......|++++|+..+++++.. .|.+ ..++..++.++...|++++|+.++++++.. .|....
T Consensus 41 ~a~~~~~~~~~~~A~~~~~~~~~~-----~~~~---~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~ 104 (136)
T 2fo7_A 41 LGNAYYKQGDYDEAIEYYQKALEL-----DPRS---AEAWYNLGNAYYKQGDYDEAIEYYQKALEL--------DPRSAE 104 (136)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHTTTCHHHHHHHHHHHHHH--------CTTCHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHH-----CCCc---hHHHHHHHHHHHHhcCHHHHHHHHHHHHHh--------CCCChH
Confidence 344455678999999999988764 2333 346678899999999999999999988764 233356
Q ss_pred HHHHhhHHHHhhcChHHHHHHHHHHHHH
Q 014710 358 QYYTCGKLEWFLGDTENAIKSMTEAVEI 385 (420)
Q Consensus 358 ~l~~La~~~~~~g~~~eA~~~l~~A~~i 385 (420)
.++.+|.++...|++++|..++.+++.+
T Consensus 105 ~~~~la~~~~~~~~~~~A~~~~~~~~~~ 132 (136)
T 2fo7_A 105 AWYNLGNAYYKQGDYDEAIEYYQKALEL 132 (136)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHHHcc
Confidence 7888999999999999999999999865
No 128
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=97.87 E-value=0.00015 Score=67.09 Aligned_cols=108 Identities=9% Similarity=0.022 Sum_probs=86.2
Q ss_pred HHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCC-hHHH
Q 014710 278 KTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH-PLLG 356 (420)
Q Consensus 278 ~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~h-p~~~ 356 (420)
.+..+...|++++|++.+++++.. .|.+ ..++..++.++...|++++|+.++++++.......+... |...
T Consensus 165 l~~~~~~~~~~~~A~~~~~~al~~-----~~~~---~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~ 236 (330)
T 3hym_B 165 IGLEYGLTNNSKLAERFFSQALSI-----APED---PFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWE 236 (330)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTT-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCC
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHh-----CCCC---hHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccHHH
Confidence 344556678999999999988654 3444 466788999999999999999999999998766655333 5667
Q ss_pred HHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchHH
Q 014710 357 LQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMK 398 (420)
Q Consensus 357 ~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~~ 398 (420)
..+..+|.++...|++++|+.++++++++ .|+++.+.
T Consensus 237 ~~~~~la~~~~~~g~~~~A~~~~~~a~~~-----~~~~~~~~ 273 (330)
T 3hym_B 237 PLLNNLGHVCRKLKKYAEALDYHRQALVL-----IPQNASTY 273 (330)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----STTCSHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhh-----CccchHHH
Confidence 78999999999999999999999999976 45555443
No 129
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=97.86 E-value=8.5e-05 Score=66.93 Aligned_cols=95 Identities=16% Similarity=0.079 Sum_probs=51.3
Q ss_pred HHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHH
Q 014710 277 KKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLG 356 (420)
Q Consensus 277 ~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~ 356 (420)
..|..+...|++++|+..+++++.. .|.++. ++..++.++...|++++|++++++++. .|.+....+
T Consensus 8 ~~a~~~~~~~~~~~A~~~~~~~l~~-----~p~~~~---~~~~l~~~~~~~~~~~~A~~~~~~a~~-----~~~~~~~~~ 74 (272)
T 3u4t_A 8 RYADFLFKNNNYAEAIEVFNKLEAK-----KYNSPY---IYNRRAVCYYELAKYDLAQKDIETYFS-----KVNATKAKS 74 (272)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHT-----TCCCST---THHHHHHHHHHTTCHHHHHHHHHHHHT-----TSCTTTCCH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHh-----CCCcHH---HHHHHHHHHHHHhhHHHHHHHHHHHHh-----ccCchhHHH
Confidence 3444455556666666666666542 233322 344455566666666666666665544 122223335
Q ss_pred HHHHHhhHHHHhhcChHHHHHHHHHHHH
Q 014710 357 LQYYTCGKLEWFLGDTENAIKSMTEAVE 384 (420)
Q Consensus 357 ~~l~~La~~~~~~g~~~eA~~~l~~A~~ 384 (420)
..++.+|.++...|++++|+.++++|++
T Consensus 75 ~~~~~lg~~~~~~~~~~~A~~~~~~a~~ 102 (272)
T 3u4t_A 75 ADFEYYGKILMKKGQDSLAIQQYQAAVD 102 (272)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHh
Confidence 5556666666666666666666666655
No 130
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=97.85 E-value=0.0002 Score=52.57 Aligned_cols=73 Identities=23% Similarity=0.330 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCC
Q 014710 313 LMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGT 392 (420)
Q Consensus 313 ~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~ 392 (420)
...++..++.++...|++++|+.++++++.. .|.....++.+|.++...|++++|+.++++|+++ .|
T Consensus 8 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~-----~p 74 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALEL--------DPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALEL-----DP 74 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CT
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc-----CC
Confidence 4567788999999999999999999999875 2444568899999999999999999999999986 35
Q ss_pred CCchHH
Q 014710 393 NSPFMK 398 (420)
Q Consensus 393 ~h~~~~ 398 (420)
+++...
T Consensus 75 ~~~~~~ 80 (91)
T 1na3_A 75 NNAEAK 80 (91)
T ss_dssp TCHHHH
T ss_pred CCHHHH
Confidence 555433
No 131
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=97.84 E-value=0.00015 Score=73.62 Aligned_cols=96 Identities=17% Similarity=-0.003 Sum_probs=79.3
Q ss_pred HHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCCh
Q 014710 274 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 353 (420)
Q Consensus 274 ~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp 353 (420)
.....+..+...|++++|++.+++++.. .|.+ ..++..++.++...|++++|++++++++.. +|
T Consensus 25 ~~~~lg~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--------~p 88 (568)
T 2vsy_A 25 AWLMLADAELGMGDTTAGEMAVQRGLAL-----HPGH---PEAVARLGRVRWTQQRHAEAAVLLQQASDA--------AP 88 (568)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHTT-----STTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHCCCHHHHHHHHHHHHhc--------CC
Confidence 3444555666779999999999998763 3444 567788999999999999999999999876 34
Q ss_pred HHHHHHHHhhHHHHhhcChHHHHHHHHHHHHH
Q 014710 354 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 385 (420)
Q Consensus 354 ~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i 385 (420)
.-...++.+|.++..+|++++|+.+|++|+++
T Consensus 89 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 120 (568)
T 2vsy_A 89 EHPGIALWLGHALEDAGQAEAAAAAYTRAHQL 120 (568)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 45678899999999999999999999999886
No 132
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=97.84 E-value=0.00024 Score=70.55 Aligned_cols=94 Identities=12% Similarity=0.018 Sum_probs=77.5
Q ss_pred CChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHh--------hcHHHHHHHHHHhHHHHHHhcCCCChHHHH
Q 014710 286 GNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMEL--------EDWKEALAYCQLTIPVYQRVYPQFHPLLGL 357 (420)
Q Consensus 286 g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~--------g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~ 357 (420)
|++++|++.+++++.+ .|.+ ..++..++.+|... |++++|++++++++.+. +.++....
T Consensus 193 g~~~~A~~~~~~al~~-----~p~~---~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~-----p~~~~~~~ 259 (474)
T 4abn_A 193 RHVMDSVRQAKLAVQM-----DVLD---GRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVD-----RKASSNPD 259 (474)
T ss_dssp HHHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHC-----GGGGGCHH
T ss_pred hhHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhC-----CCcccCHH
Confidence 7889999999999875 3444 45678899999999 99999999999998872 11227888
Q ss_pred HHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchH
Q 014710 358 QYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFM 397 (420)
Q Consensus 358 ~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~ 397 (420)
.++++|.++..+|++++|+..|++|+++ .|+++..
T Consensus 260 ~~~~lg~~~~~~g~~~~A~~~~~~al~l-----~p~~~~a 294 (474)
T 4abn_A 260 LHLNRATLHKYEESYGEALEGFSQAAAL-----DPAWPEP 294 (474)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHHH
Confidence 9999999999999999999999999986 4566643
No 133
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=97.83 E-value=0.00025 Score=59.94 Aligned_cols=118 Identities=16% Similarity=0.167 Sum_probs=70.1
Q ss_pred HHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHH------------
Q 014710 278 KTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQ------------ 345 (420)
Q Consensus 278 ~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~------------ 345 (420)
.+.....+|++++|++.|++++++ .|++ ..++..++.++...|++++|+..+.+++....
T Consensus 11 lG~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 82 (184)
T 3vtx_A 11 IGDKKRTKGDFDGAIRAYKKVLKA-----DPNN---VETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSA 82 (184)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHH
Confidence 344455667777777777777654 3444 34555666677777777776666655543210
Q ss_pred -HhcC-------------CCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHH
Q 014710 346 -RVYP-------------QFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEA 411 (420)
Q Consensus 346 -~~~g-------------~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~~~~~~~l~~~~~~~ 411 (420)
...+ ..+|.-...+..+|.++..+|++++|+..+++++++ .|+++ ++...++.+...+
T Consensus 83 ~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~-----~p~~~---~~~~~lg~~~~~~ 154 (184)
T 3vtx_A 83 NFMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISI-----KPGFI---RAYQSIGLAYEGK 154 (184)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHHT
T ss_pred HHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHh-----cchhh---hHHHHHHHHHHHC
Confidence 0000 013344456777788888888888888888888775 34443 4445555554433
No 134
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=97.83 E-value=0.00014 Score=64.16 Aligned_cols=108 Identities=14% Similarity=0.092 Sum_probs=82.0
Q ss_pred HHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHH
Q 014710 277 KKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLG 356 (420)
Q Consensus 277 ~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~ 356 (420)
..+......|++++|+..+++++.. .|.+ ..++..++.++...|++++|+.++++++.. .|...
T Consensus 130 ~~a~~~~~~~~~~~A~~~~~~~~~~-----~~~~---~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~--------~~~~~ 193 (243)
T 2q7f_A 130 MLGTVLVKLEQPKLALPYLQRAVEL-----NEND---TEARFQFGMCLANEGMLDEALSQFAAVTEQ--------DPGHA 193 (243)
T ss_dssp HHHHHHHHTSCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHHTCCHHHHHHHHHHHHH--------CTTCH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHh-----CCcc---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CcccH
Confidence 3445556678999999999988765 2333 346778899999999999999999988765 23445
Q ss_pred HHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHH
Q 014710 357 LQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLE 405 (420)
Q Consensus 357 ~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~~~~~~~l~ 405 (420)
..++.+|.++...|++++|..++++++++ .|+++.....+..+.
T Consensus 194 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~-----~p~~~~~~~~~~~l~ 237 (243)
T 2q7f_A 194 DAFYNAGVTYAYKENREKALEMLDKAIDI-----QPDHMLALHAKKLLG 237 (243)
T ss_dssp HHHHHHHHHHHHTTCTTHHHHHHHHHHHH-----CTTCHHHHHHHTC--
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHcc-----CcchHHHHHHHHHHH
Confidence 67899999999999999999999999874 567776665554443
No 135
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=97.83 E-value=0.00011 Score=67.95 Aligned_cols=111 Identities=15% Similarity=0.197 Sum_probs=87.1
Q ss_pred HHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCC-hhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChH
Q 014710 276 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFS-VNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 354 (420)
Q Consensus 276 ~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h-~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~ 354 (420)
...+..+...|++++|+..+++++......-.+.. +....++..++.++...|++++|+.++++++... |.
T Consensus 197 ~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~--------~~ 268 (330)
T 3hym_B 197 HEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLI--------PQ 268 (330)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--------TT
T ss_pred HHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC--------cc
Confidence 34455566789999999999999987655433333 3345678889999999999999999999998762 44
Q ss_pred HHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchHHH
Q 014710 355 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKE 399 (420)
Q Consensus 355 ~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~~~ 399 (420)
....+..+|.++..+|++++|..++++|+++ .|+++....
T Consensus 269 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~-----~p~~~~~~~ 308 (330)
T 3hym_B 269 NASTYSAIGYIHSLMGNFENAVDYFHTALGL-----RRDDTFSVT 308 (330)
T ss_dssp CSHHHHHHHHHHHHHTCHHHHHHHHHTTTTT-----CSCCHHHHH
T ss_pred chHHHHHHHHHHHHhccHHHHHHHHHHHHcc-----CCCchHHHH
Confidence 4568899999999999999999999998764 466665443
No 136
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=97.80 E-value=0.00046 Score=63.55 Aligned_cols=98 Identities=15% Similarity=0.064 Sum_probs=79.5
Q ss_pred HHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHH
Q 014710 276 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL 355 (420)
Q Consensus 276 ~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~ 355 (420)
...+..+...|++++|++.+++++.. .|.+ ..++..++.++...|++++|+.++++++.. .|..
T Consensus 176 ~~la~~~~~~~~~~~A~~~~~~~~~~-----~~~~---~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~--------~~~~ 239 (327)
T 3cv0_A 176 ASLGVLYNLSNNYDSAAANLRRAVEL-----RPDD---AQLWNKLGATLANGNRPQEALDAYNRALDI--------NPGY 239 (327)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTC
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHh-----CCCc---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHc--------CCCC
Confidence 33455566789999999999998765 3444 456788999999999999999999998775 2444
Q ss_pred HHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHh
Q 014710 356 GLQYYTCGKLEWFLGDTENAIKSMTEAVEILRIT 389 (420)
Q Consensus 356 ~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~ 389 (420)
...++.+|.++..+|++++|+.++++++.+....
T Consensus 240 ~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~ 273 (327)
T 3cv0_A 240 VRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVGG 273 (327)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcc
Confidence 5678999999999999999999999999876553
No 137
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=97.79 E-value=0.00044 Score=63.64 Aligned_cols=103 Identities=13% Similarity=0.028 Sum_probs=80.6
Q ss_pred HHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHH----------
Q 014710 274 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPV---------- 343 (420)
Q Consensus 274 ~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~---------- 343 (420)
.....|......|++++|+..|++++.. .|.++ .++..++.++...|++++|+.++++++..
T Consensus 119 ~~~~~a~~~~~~g~~~~A~~~~~~al~~-----~P~~~---~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~ 190 (287)
T 3qou_A 119 LXAQQAMQLMQESNYTDALPLLXDAWQL-----SNQNG---EIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLV 190 (287)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH-----TTSCH---HHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHH
T ss_pred hHHHHHHHHHhCCCHHHHHHHHHHHHHh-----CCcch---hHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHH
Confidence 3455566677789999999999999875 35554 67888999999999999999998887541
Q ss_pred -----------------HHHhcCCCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHH
Q 014710 344 -----------------YQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 385 (420)
Q Consensus 344 -----------------~~~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i 385 (420)
+++.. ..+|.-...++.||.++...|++++|+..|+++++.
T Consensus 191 ~~~~l~~~~~~~~a~~~l~~al-~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~ 248 (287)
T 3qou_A 191 AQIELLXQAADTPEIQQLQQQV-AENPEDAALATQLALQLHQVGRNEEALELLFGHLRX 248 (287)
T ss_dssp HHHHHHHHHTSCHHHHHHHHHH-HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHhhcccCccHHHHHHHH-hcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhc
Confidence 11111 125566678999999999999999999999999885
No 138
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=97.79 E-value=0.00028 Score=58.90 Aligned_cols=94 Identities=17% Similarity=0.148 Sum_probs=76.2
Q ss_pred HHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHH
Q 014710 277 KKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLG 356 (420)
Q Consensus 277 ~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~ 356 (420)
..+..+...|++++|++.+++++.. .|.+ ..++..++.++...|++++|+.++++++... |...
T Consensus 81 ~~a~~~~~~~~~~~A~~~~~~~~~~-----~~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~--------~~~~ 144 (186)
T 3as5_A 81 VLGLTYVQVQKYDLAVPLLIKVAEA-----NPIN---FNVRFRLGVALDNLGRFDEAIDSFKIALGLR--------PNEG 144 (186)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------TTCH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHhc-----CcHh---HHHHHHHHHHHHHcCcHHHHHHHHHHHHhcC--------ccch
Confidence 3344556678999999999998765 3443 4567789999999999999999999987652 3335
Q ss_pred HHHHHhhHHHHhhcChHHHHHHHHHHHHHH
Q 014710 357 LQYYTCGKLEWFLGDTENAIKSMTEAVEIL 386 (420)
Q Consensus 357 ~~l~~La~~~~~~g~~~eA~~~l~~A~~i~ 386 (420)
..++.+|.++...|++++|..++++++.+.
T Consensus 145 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 174 (186)
T 3as5_A 145 KVHRAIAFSYEQMGRHEEALPHFKKANELD 174 (186)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 788999999999999999999999998764
No 139
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=97.77 E-value=0.00015 Score=69.38 Aligned_cols=90 Identities=20% Similarity=0.223 Sum_probs=56.2
Q ss_pred HhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHH
Q 014710 279 TLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQ 358 (420)
Q Consensus 279 a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~ 358 (420)
+..+...|++++|++.+++++.. .|.++ .++..++.++...|++++|+.++++++.. +|.....
T Consensus 278 ~~~~~~~g~~~~A~~~~~~al~~-----~p~~~---~~~~~l~~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~ 341 (388)
T 1w3b_A 278 ANALKEKGSVAEAEDCYNTALRL-----CPTHA---DSLNNLANIKREQGNIEEAVRLYRKALEV--------FPEFAAA 341 (388)
T ss_dssp HHHHHHHSCHHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHTTTCHHHHHHHHHHHTTS--------CTTCHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHhh-----CcccH---HHHHHHHHHHHHcCCHHHHHHHHHHHHhc--------CCCcHHH
Confidence 33344456666666666666543 23332 34455666666677777777666666542 3555566
Q ss_pred HHHhhHHHHhhcChHHHHHHHHHHHH
Q 014710 359 YYTCGKLEWFLGDTENAIKSMTEAVE 384 (420)
Q Consensus 359 l~~La~~~~~~g~~~eA~~~l~~A~~ 384 (420)
++.+|.++...|++++|+.++++|++
T Consensus 342 ~~~l~~~~~~~g~~~~A~~~~~~a~~ 367 (388)
T 1w3b_A 342 HSNLASVLQQQGKLQEALMHYKEAIR 367 (388)
T ss_dssp HHHHHHHHHTTTCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 77777777777777777777777765
No 140
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=97.77 E-value=0.00043 Score=60.85 Aligned_cols=93 Identities=15% Similarity=0.020 Sum_probs=71.9
Q ss_pred HHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHH
Q 014710 277 KKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLG 356 (420)
Q Consensus 277 ~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~ 356 (420)
..+..+...|++++|++.+++++... |.+ ..++..++.++...|++++|+.++++++.. .|...
T Consensus 96 ~la~~~~~~~~~~~A~~~~~~~~~~~-----~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~--------~~~~~ 159 (243)
T 2q7f_A 96 GAGNVYVVKEMYKEAKDMFEKALRAG-----MEN---GDLFYMLGTVLVKLEQPKLALPYLQRAVEL--------NENDT 159 (243)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHT-----CCS---HHHHHHHHHHHHHTSCHHHHHHHHHHHHHH--------CTTCH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHhC-----CCC---HHHHHHHHHHHHHhccHHHHHHHHHHHHHh--------CCccH
Confidence 34455566788999999888887642 344 345677888899999999999999888765 23345
Q ss_pred HHHHHhhHHHHhhcChHHHHHHHHHHHHH
Q 014710 357 LQYYTCGKLEWFLGDTENAIKSMTEAVEI 385 (420)
Q Consensus 357 ~~l~~La~~~~~~g~~~eA~~~l~~A~~i 385 (420)
..++.+|.++...|++++|+.+++++++.
T Consensus 160 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~ 188 (243)
T 2q7f_A 160 EARFQFGMCLANEGMLDEALSQFAAVTEQ 188 (243)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 57888999999999999999999998875
No 141
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=97.76 E-value=0.00025 Score=65.54 Aligned_cols=105 Identities=12% Similarity=0.085 Sum_probs=83.9
Q ss_pred cCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhh
Q 014710 284 SCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCG 363 (420)
Q Consensus 284 ~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La 363 (420)
..|++++|+..+++++.. .|.+ ..++..++.++...|++++|..++++++..- |.-...++++|
T Consensus 178 ~~~~~~eA~~~~~~~l~~-----~p~~---~~~~~~la~~~~~~g~~~eA~~~l~~al~~~--------p~~~~~l~~l~ 241 (291)
T 3mkr_A 178 GGEKLQDAYYIFQEMADK-----CSPT---LLLLNGQAACHMAQGRWEAAEGVLQEALDKD--------SGHPETLINLV 241 (291)
T ss_dssp CTTHHHHHHHHHHHHHHH-----SCCC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------TTCHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHh-----CCCc---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--------CCCHHHHHHHH
Confidence 357889999999998764 3444 4577889999999999999999999998762 44455689999
Q ss_pred HHHHhhcChHH-HHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHH
Q 014710 364 KLEWFLGDTEN-AIKSMTEAVEILRITHGTNSPFMKELILKLEEAQA 409 (420)
Q Consensus 364 ~~~~~~g~~~e-A~~~l~~A~~i~~~~~G~~h~~~~~~~~~l~~~~~ 409 (420)
.++..+|+..+ +..+++++++ ..|+||.+.++..+-..-..
T Consensus 242 ~~~~~~g~~~eaa~~~~~~~~~-----~~P~~~~~~d~~~~~~~fd~ 283 (291)
T 3mkr_A 242 VLSQHLGKPPEVTNRYLSQLKD-----AHRSHPFIKEYRAKENDFDR 283 (291)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHH-----HCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCHHHHHHHHHHHHH-----hCCCChHHHHHHHHHHHHHH
Confidence 99999999987 5688888764 57999999998777665543
No 142
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=97.76 E-value=0.00011 Score=66.10 Aligned_cols=91 Identities=10% Similarity=-0.018 Sum_probs=75.9
Q ss_pred hcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHh
Q 014710 283 TSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTC 362 (420)
Q Consensus 283 ~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~L 362 (420)
..+|++++|++.+++++.. ....++....++..++.++...|++++|+.++++++.. +|.....++.+
T Consensus 16 ~~~~~~~~A~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~--------~~~~~~~~~~l 83 (275)
T 1xnf_A 16 QPTLQQEVILARMEQILAS----RALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAI--------RPDMPEVFNYL 83 (275)
T ss_dssp CCCHHHHHHHHHHHHHHTS----SCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CCCCHHHHHHH
T ss_pred CccchHHHHHHHHHHHHhc----ccccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHc--------CCCcHHHHHHH
Confidence 3457788999988888653 12334667889999999999999999999999999876 34456688999
Q ss_pred hHHHHhhcChHHHHHHHHHHHHH
Q 014710 363 GKLEWFLGDTENAIKSMTEAVEI 385 (420)
Q Consensus 363 a~~~~~~g~~~eA~~~l~~A~~i 385 (420)
|.++...|++++|+.++++|+++
T Consensus 84 a~~~~~~~~~~~A~~~~~~al~~ 106 (275)
T 1xnf_A 84 GIYLTQAGNFDAAYEAFDSVLEL 106 (275)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHccCHHHHHHHHHHHHhc
Confidence 99999999999999999999986
No 143
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=97.75 E-value=0.00014 Score=67.19 Aligned_cols=113 Identities=12% Similarity=0.022 Sum_probs=89.5
Q ss_pred HHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCC---
Q 014710 275 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQF--- 351 (420)
Q Consensus 275 l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~--- 351 (420)
....+..+...|++++|+..+++++.. .|.+ ..++..++.++...|++++|++++++++.......+..
T Consensus 209 ~~~l~~~~~~~~~~~~A~~~~~~a~~~-----~~~~---~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~ 280 (327)
T 3cv0_A 209 WNKLGATLANGNRPQEALDAYNRALDI-----NPGY---VRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVGGTTPTGEA 280 (327)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCC-----
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHc-----CCCC---HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccccccccc
Confidence 344555667789999999999998765 2333 44677899999999999999999999988753322222
Q ss_pred -ChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCc
Q 014710 352 -HPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSP 395 (420)
Q Consensus 352 -hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~ 395 (420)
+......+..+|.++..+|++++|..+++++++++...+|.++.
T Consensus 281 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~l~~~~~~~~~~~~ 325 (327)
T 3cv0_A 281 SREATRSMWDFFRMLLNVMNRPDLVELTYAQNVEPFAKEFGLQSM 325 (327)
T ss_dssp CCTHHHHHHHHHHHHHHHTTCHHHHHHHTTCCSHHHHHHTTSSCC
T ss_pred hhhcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhcchhhhHHHh
Confidence 22267889999999999999999999999999999999887663
No 144
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=97.74 E-value=0.00023 Score=70.70 Aligned_cols=95 Identities=15% Similarity=0.067 Sum_probs=79.6
Q ss_pred HHHHHHhhhhcCCCh-HHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCC
Q 014710 274 ILSKKTLALTSCGNH-QEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 352 (420)
Q Consensus 274 ~l~~~a~~~~~~g~~-~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~h 352 (420)
.....+..+...|++ ++|++.+++++.+ .|.+ ..++..++.+|...|++++|++++++++...
T Consensus 104 ~~~~lg~~~~~~g~~~~~A~~~~~~al~~-----~p~~---~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~-------- 167 (474)
T 4abn_A 104 ALMLKGKALNVTPDYSPEAEVLLSKAVKL-----EPEL---VEAWNQLGEVYWKKGDVTSAHTCFSGALTHC-------- 167 (474)
T ss_dssp HHHHHHHHHTSSSSCCHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHTTC--------
T ss_pred HHHHHHHHHHhccccHHHHHHHHHHHHhh-----CCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC--------
Confidence 344556666778999 9999999999875 2333 5678899999999999999999999998752
Q ss_pred hHHHHHHHHhhHHHHhh---------cChHHHHHHHHHHHHH
Q 014710 353 PLLGLQYYTCGKLEWFL---------GDTENAIKSMTEAVEI 385 (420)
Q Consensus 353 p~~~~~l~~La~~~~~~---------g~~~eA~~~l~~A~~i 385 (420)
|. ...+..||.++..+ |++++|+.++++|+++
T Consensus 168 p~-~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~ 208 (474)
T 4abn_A 168 KN-KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQM 208 (474)
T ss_dssp CC-HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CC-HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHh
Confidence 33 48899999999999 9999999999999986
No 145
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.73 E-value=0.0011 Score=64.19 Aligned_cols=116 Identities=15% Similarity=0.014 Sum_probs=97.7
Q ss_pred HHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHH
Q 014710 277 KKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLG 356 (420)
Q Consensus 277 ~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~ 356 (420)
..+..+...|++.+|+..++.++...... ..++..+.++..++.+|...|+|++|..++++++.+...+. ..+...+
T Consensus 140 ~la~~~~~~g~~~~A~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~-~~~~~~~ 216 (434)
T 4b4t_Q 140 KLATLHYQKKQYKDSLALINDLLREFKKL--DDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAANSIY-CPTQTVA 216 (434)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHTTS--SCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSC-CCHHHHH
T ss_pred HHHHHHHHccChHHHHHHHHHHHHHHHhc--ccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcCC-CchHHHH
Confidence 33455667799999999999987765432 45677889999999999999999999999999999887664 4566788
Q ss_pred HHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCc
Q 014710 357 LQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSP 395 (420)
Q Consensus 357 ~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~ 395 (420)
..+..+|.++...|++++|..++.+|+......-..++.
T Consensus 217 ~~~~~~g~~~~~~~~y~~A~~~~~~a~~~~~~~~~~~~~ 255 (434)
T 4b4t_Q 217 ELDLMSGILHCEDKDYKTAFSYFFESFESYHNLTTHNSY 255 (434)
T ss_dssp HHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHHTTTSSCH
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhhhhhhH
Confidence 999999999999999999999999999999887666654
No 146
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=97.72 E-value=0.00029 Score=53.85 Aligned_cols=88 Identities=17% Similarity=0.184 Sum_probs=67.7
Q ss_pred HHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCC
Q 014710 314 MQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTN 393 (420)
Q Consensus 314 ~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~ 393 (420)
...+..++..+...|++++|++++++++.. .|.-...++++|.++..+|++++|+..+++|+++ .|+
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~-----~p~ 70 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLITA--------QPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRY-----TST 70 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTS-----CSS
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh-----CCC
Confidence 456778999999999999999999999876 3444677899999999999999999999999875 344
Q ss_pred Cc---hHHHHHHHHHHHHHHHhcc
Q 014710 394 SP---FMKELILKLEEAQAEASYK 414 (420)
Q Consensus 394 h~---~~~~~~~~l~~~~~~~~~~ 414 (420)
++ ....+...++.+...+...
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~ 94 (111)
T 2l6j_A 71 AEHVAIRSKLQYRLELAQGAVGSV 94 (111)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHHCC
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhH
Confidence 41 2245556666665555433
No 147
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=97.68 E-value=0.00049 Score=69.57 Aligned_cols=110 Identities=13% Similarity=0.036 Sum_probs=86.6
Q ss_pred HHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChh-HHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChH
Q 014710 276 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVN-LMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 354 (420)
Q Consensus 276 ~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~-~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~ 354 (420)
...+..+...|++++|++.+++++....+. +.++. ...++..++.++...|++++|++++++++... |.
T Consensus 479 ~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~--~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~--------p~ 548 (597)
T 2xpi_A 479 NELGVVAFNKSDMQTAINHFQNALLLVKKT--QSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLLS--------TN 548 (597)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHS--CCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--------SC
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHhhhcc--ccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC--------CC
Confidence 344555667899999999999998765431 23444 47888999999999999999999999988762 33
Q ss_pred HHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchHHHH
Q 014710 355 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKEL 400 (420)
Q Consensus 355 ~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~~~~ 400 (420)
-...+..||.++...|++++|+.++++++++ .|+++.....
T Consensus 549 ~~~~~~~l~~~~~~~g~~~~A~~~~~~~l~~-----~p~~~~~~~~ 589 (597)
T 2xpi_A 549 DANVHTAIALVYLHKKIPGLAITHLHESLAI-----SPNEIMASDL 589 (597)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCHHHHHH
T ss_pred ChHHHHHHHHHHHHhCCHHHHHHHHHHHHhc-----CCCChHHHHH
Confidence 4578899999999999999999999999885 5666655443
No 148
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=97.66 E-value=0.00024 Score=56.02 Aligned_cols=83 Identities=11% Similarity=-0.055 Sum_probs=68.2
Q ss_pred HHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCch
Q 014710 317 REKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPF 396 (420)
Q Consensus 317 ~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~ 396 (420)
+..++..+...|++++|+.++++++.. .+.++.....++.+|.++...|++++|+.+++++++. .|+++.
T Consensus 5 ~~~~a~~~~~~~~~~~A~~~~~~~~~~-----~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~-----~p~~~~ 74 (129)
T 2xev_A 5 AYNVAFDALKNGKYDDASQLFLSFLEL-----YPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSR-----YPTHDK 74 (129)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-----CSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTSTT
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHH-----CCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHH-----CCCCcc
Confidence 456788899999999999999988764 3577888889999999999999999999999999874 577766
Q ss_pred HHHHHHHHHHHHH
Q 014710 397 MKELILKLEEAQA 409 (420)
Q Consensus 397 ~~~~~~~l~~~~~ 409 (420)
..+....++.+..
T Consensus 75 ~~~~~~~la~~~~ 87 (129)
T 2xev_A 75 AAGGLLKLGLSQY 87 (129)
T ss_dssp HHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHH
Confidence 6666666666543
No 149
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=97.66 E-value=0.00035 Score=68.98 Aligned_cols=99 Identities=11% Similarity=0.037 Sum_probs=83.9
Q ss_pred HHHHHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCC
Q 014710 271 EVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQ 350 (420)
Q Consensus 271 ~~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~ 350 (420)
.++.+...+..+...|++++|+..|++++... | + ..++..++.++...|++++|+.++++++..
T Consensus 5 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~-----p-~---~~~~~~la~~~~~~g~~~~A~~~~~~al~~------- 68 (514)
T 2gw1_A 5 YALALKDKGNQFFRNKKYDDAIKYYNWALELK-----E-D---PVFYSNLSACYVSVGDLKKVVEMSTKALEL------- 68 (514)
T ss_dssp HHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHC-----C-C---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-------
T ss_pred hHHHHHHHHHHHHHhccHHHHHHHHHHHHhcC-----c-c---HHHHHhHHHHHHHHhhHHHHHHHHHHHhcc-------
Confidence 45666777888888999999999999998753 4 2 567888999999999999999999999875
Q ss_pred CChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHH
Q 014710 351 FHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEIL 386 (420)
Q Consensus 351 ~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~ 386 (420)
+|.....++.+|.++..+|++++|+..+++++.+-
T Consensus 69 -~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~ 103 (514)
T 2gw1_A 69 -KPDYSKVLLRRASANEGLGKFADAMFDLSVLSLNG 103 (514)
T ss_dssp -CSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSS
T ss_pred -ChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC
Confidence 35556789999999999999999999999987653
No 150
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.66 E-value=0.0004 Score=67.26 Aligned_cols=76 Identities=16% Similarity=0.046 Sum_probs=38.8
Q ss_pred hhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHH
Q 014710 311 VNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRI 388 (420)
Q Consensus 311 ~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~ 388 (420)
+...++...|+.++...|+|.+|+.++++++.... -..+++..+..+..++.++..+|++++|..++++|+.+...
T Consensus 132 ~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~ 207 (434)
T 4b4t_Q 132 FLKHSLSIKLATLHYQKKQYKDSLALINDLLREFK--KLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAANS 207 (434)
T ss_dssp SSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHT--TSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHH--hcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhc
Confidence 33444555555555555555555555555433321 12445555555555555555555555555555555554443
No 151
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=97.65 E-value=0.0002 Score=59.37 Aligned_cols=77 Identities=9% Similarity=-0.057 Sum_probs=66.5
Q ss_pred CCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHH
Q 014710 308 PFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILR 387 (420)
Q Consensus 308 ~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~ 387 (420)
.-+|.-..++..++.++...|++++|+.++++++.. .|.-...++.||.++..+|++++|+..|++|+.+
T Consensus 30 ~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~--------~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l-- 99 (151)
T 3gyz_A 30 AIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIY--------DFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFAL-- 99 (151)
T ss_dssp CSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--
T ss_pred CCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhh--
Confidence 346777888999999999999999999999999876 4555668999999999999999999999999876
Q ss_pred HhcCCCCchH
Q 014710 388 ITHGTNSPFM 397 (420)
Q Consensus 388 ~~~G~~h~~~ 397 (420)
.|++|..
T Consensus 100 ---~P~~~~~ 106 (151)
T 3gyz_A 100 ---GKNDYTP 106 (151)
T ss_dssp ---SSSCCHH
T ss_pred ---CCCCcHH
Confidence 4667654
No 152
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=97.64 E-value=0.00029 Score=67.94 Aligned_cols=62 Identities=6% Similarity=-0.088 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHH
Q 014710 316 TREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 385 (420)
Q Consensus 316 ~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i 385 (420)
++.+++.++..+|++++|+..+++++.+ .|.-...++++|.++..+|++++|+.++++|+++
T Consensus 168 a~~~~g~~~~~~g~~~eAl~~~~kal~l--------dP~~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l 229 (382)
T 2h6f_A 168 VWHHRRVLVEWLRDPSQELEFIADILNQ--------DAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKE 229 (382)
T ss_dssp HHHHHHHHHHHHTCCTTHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHh--------CccCHHHHHHHHHHHHHcCChHHHHHHHHHHHHh
Confidence 3444444455555555555555554443 2333445555555655566666666666665553
No 153
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=97.64 E-value=0.00013 Score=65.78 Aligned_cols=96 Identities=14% Similarity=-0.004 Sum_probs=69.3
Q ss_pred HHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHH
Q 014710 277 KKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLG 356 (420)
Q Consensus 277 ~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~ 356 (420)
..+..+...|++++|++.+++++.. +++......++..++.++...|++++|++++++++.. +|...
T Consensus 42 ~l~~~~~~~~~~~~A~~~~~~a~~~-----~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~--------~~~~~ 108 (272)
T 3u4t_A 42 RRAVCYYELAKYDLAQKDIETYFSK-----VNATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDR--------DTTRL 108 (272)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTT-----SCTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------STTCT
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHhc-----cCchhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhc--------CcccH
Confidence 3444556678888888888877641 2333334667788888888888888888888888764 23344
Q ss_pred HHHHHhhHHHHhhcChHHHHHHHHHHHHH
Q 014710 357 LQYYTCGKLEWFLGDTENAIKSMTEAVEI 385 (420)
Q Consensus 357 ~~l~~La~~~~~~g~~~eA~~~l~~A~~i 385 (420)
..+..+|.++...|++++|+.++++|+++
T Consensus 109 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~ 137 (272)
T 3u4t_A 109 DMYGQIGSYFYNKGNFPLAIQYMEKQIRP 137 (272)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHGGGCCS
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHhhc
Confidence 57788888888888888888888887765
No 154
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=97.64 E-value=0.00058 Score=65.14 Aligned_cols=87 Identities=18% Similarity=0.179 Sum_probs=46.7
Q ss_pred hhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHH
Q 014710 282 LTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYT 361 (420)
Q Consensus 282 ~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~ 361 (420)
+...|++++|++.+++++.. .|.++ .++..++.++...|++++|++++++++.. +|.-...+..
T Consensus 247 ~~~~g~~~~A~~~~~~al~~-----~p~~~---~~~~~l~~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~ 310 (388)
T 1w3b_A 247 YYEQGLIDLAIDTYRRAIEL-----QPHFP---DAYCNLANALKEKGSVAEAEDCYNTALRL--------CPTHADSLNN 310 (388)
T ss_dssp HHHTTCHHHHHHHHHHHHHT-----CSSCH---HHHHHHHHHHHHHSCHHHHHHHHHHHHHH--------CTTCHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHhh-----CCCCH---HHHHHHHHHHHHcCCHHHHHHHHHHHHhh--------CcccHHHHHH
Confidence 34445555555555555432 23332 23455566666666666666666655543 1223345556
Q ss_pred hhHHHHhhcChHHHHHHHHHHHH
Q 014710 362 CGKLEWFLGDTENAIKSMTEAVE 384 (420)
Q Consensus 362 La~~~~~~g~~~eA~~~l~~A~~ 384 (420)
+|.++...|++++|+.+++++++
T Consensus 311 l~~~~~~~g~~~~A~~~~~~al~ 333 (388)
T 1w3b_A 311 LANIKREQGNIEEAVRLYRKALE 333 (388)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHTT
T ss_pred HHHHHHHcCCHHHHHHHHHHHHh
Confidence 66666666666666666666654
No 155
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=97.63 E-value=4e-05 Score=58.87 Aligned_cols=95 Identities=14% Similarity=0.155 Sum_probs=72.7
Q ss_pred HHHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCC-
Q 014710 273 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQF- 351 (420)
Q Consensus 273 ~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~- 351 (420)
......+......|++++|++.+++++.. .|.+ ..++.+++.++...|++++|++++++++.+ .|..
T Consensus 5 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~-----~p~~---~~~~~~lg~~~~~~g~~~~A~~~~~~al~~----~p~~~ 72 (111)
T 2l6j_A 5 EKQKEQGNSLFKQGLYREAVHCYDQLITA-----QPQN---PVGYSNKAMALIKLGEYTQAIQMCQQGLRY----TSTAE 72 (111)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHTS----CSSTT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhc-----CCCC---HHHHHHHHHHHHHhcCHHHHHHHHHHHHHh----CCCcc
Confidence 34455667778889999999999999875 3444 456789999999999999999999998764 2321
Q ss_pred -ChHHHHHHHHhhHHHHhhcChHHHHHHH
Q 014710 352 -HPLLGLQYYTCGKLEWFLGDTENAIKSM 379 (420)
Q Consensus 352 -hp~~~~~l~~La~~~~~~g~~~eA~~~l 379 (420)
....+..++.+|.++..+|++++|+..+
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 101 (111)
T 2l6j_A 73 HVAIRSKLQYRLELAQGAVGSVQIPVVEV 101 (111)
T ss_dssp SHHHHHHHHHHHHHHHHHHHCCCCCSSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHhHhhhHhHH
Confidence 1224778899999999988877765544
No 156
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=97.62 E-value=0.00013 Score=61.79 Aligned_cols=102 Identities=12% Similarity=0.057 Sum_probs=74.2
Q ss_pred HHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHH-----------
Q 014710 276 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVY----------- 344 (420)
Q Consensus 276 ~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~----------- 344 (420)
+..+..+...|++++|+..+++++.. .|.+ ..++..++.++...|++++|+.++++++...
T Consensus 10 ~~~a~~~~~~g~~~~A~~~~~~al~~-----~P~~---~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~~~ 81 (176)
T 2r5s_A 10 LKQVSELLQQGEHAQALNVIQTLSDE-----LQSR---GDVKLAKADCLLETKQFELAQELLATIPLEYQDNSYKSLIAK 81 (176)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTSCHH-----HHTS---HHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGCCHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHH-----CCCc---HHHHHHHHHHHHHCCCHHHHHHHHHHhhhccCChHHHHHHHH
Confidence 44555666788999999888887654 2333 5667788889999999999988887664321
Q ss_pred ---HHhcCC------------CChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHH
Q 014710 345 ---QRVYPQ------------FHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 385 (420)
Q Consensus 345 ---~~~~g~------------~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i 385 (420)
....+. .+|.-...++.+|.++...|++++|+..|++++++
T Consensus 82 ~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~ 137 (176)
T 2r5s_A 82 LELHQQAAESPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKV 137 (176)
T ss_dssp HHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHhhcccchHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHh
Confidence 000111 14555678899999999999999999999998764
No 157
>2h21_A Ribulose-1,5 bisphosphate carboxylase/oxygenase; SET domain, protein lysine methyltransferase, transferase; HET: SAM; 2.45A {Pisum sativum} SCOP: a.166.1.1 b.85.7.3 PDB: 2h23_A* 2h2e_A* 2h2j_A* 1p0y_A* 1ozv_A* 1mlv_A*
Probab=97.60 E-value=7.2e-05 Score=73.67 Aligned_cols=83 Identities=16% Similarity=0.193 Sum_probs=60.8
Q ss_pred CCHHHHHHHHHHhhhcccccccCCCcccccchhhhccccCCCCcCCc---eeEEe--------CCEEEEEEecCCCCCCc
Q 014710 148 ISINEIAENFSKLACNAHTICNSELRPLGTGLYPVISIINHSCLPNA---VLVFE--------GRLAVVRAVQHVPKGAE 216 (420)
Q Consensus 148 ~~~~~i~~~~~~~~~N~~~i~~~~~~~~g~glyp~~s~~NHSC~PN~---~~~f~--------~~~~~vra~r~I~~Gee 216 (420)
++.+.....+..+.+.+|.+.+ ..+.+|.|.+-|+||||.||. .+.++ ++.++++|.++|++|||
T Consensus 159 ~t~~~f~wA~~~v~SRaf~~~~----~~~~~LvP~~D~~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~~~i~~Gee 234 (440)
T 2h21_A 159 VTLDDFFWAFGILRSRAFSRLR----NENLVVVPMADLINHSAGVTTEDHAYEVKGAAGLFSWDYLFSLKSPLSVKAGEQ 234 (440)
T ss_dssp CCHHHHHHHHHHHHHHCBCCC-------CCBCCSSTTSCEECTTCCCCCCEEEC----------CEEEEEESSCBCTTSB
T ss_pred CCHHHHHHHHHHhcccceeccC----CCceEEeechHhhcCCCCcccccceeeecCcccccCCCceEEEEECCCCCCCCE
Confidence 4677788888999999997643 246899999999999999974 33332 35799999999999999
Q ss_pred cC--CChH-hHHHHh--cCcccc
Q 014710 217 GQ--FDDI-QESAIL--EGYRCK 234 (420)
Q Consensus 217 ~~--~~~~-~~~~l~--~~~~C~ 234 (420)
++ |.+. -...|+ +||...
T Consensus 235 i~~sYG~~~~N~~LL~~YGFv~~ 257 (440)
T 2h21_A 235 VYIQYDLNKSNAELALDYGFIEP 257 (440)
T ss_dssp CEECSCTTCCHHHHHHHSSCCCS
T ss_pred EEEeCCCCCCHHHHHHhCCCCcC
Confidence 75 6654 344443 478664
No 158
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=97.60 E-value=0.0017 Score=62.89 Aligned_cols=104 Identities=12% Similarity=0.016 Sum_probs=82.1
Q ss_pred HHHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHH---------HHHHHHHHHhhcHHHHHHHHHHhHHH
Q 014710 273 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTR---------EKLIKILMELEDWKEALAYCQLTIPV 343 (420)
Q Consensus 273 ~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~---------~~L~~~~~~~g~~~~A~~~~~~~l~~ 343 (420)
......+..+...|++++|+..+++++.. .|.+......+ ..++.++...|++++|+.++++++..
T Consensus 212 ~~~~~l~~~~~~~g~~~~A~~~~~~~~~~-----~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~ 286 (450)
T 2y4t_A 212 EAFYKISTLYYQLGDHELSLSEVRECLKL-----DQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKT 286 (450)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCChHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 34445566677789999999999999754 56666655444 44488999999999999999998763
Q ss_pred HHHhcCCCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHH
Q 014710 344 YQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 385 (420)
Q Consensus 344 ~~~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i 385 (420)
.|.+.......+..+|.++...|++++|+.++++++.+
T Consensus 287 ----~p~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~ 324 (450)
T 2y4t_A 287 ----EPSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQM 324 (450)
T ss_dssp ----CCSSHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred ----CCcchHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 44444444778999999999999999999999999976
No 159
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=97.58 E-value=3.3e-05 Score=76.97 Aligned_cols=109 Identities=14% Similarity=-0.009 Sum_probs=81.8
Q ss_pred HHHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCC
Q 014710 273 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 352 (420)
Q Consensus 273 ~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~h 352 (420)
......+..+...|++++|++.+++++++ +|. ...++.+++.+|..+|++++|++++++++.+ +
T Consensus 41 ~~~~~lg~~~~~~g~~~~A~~~~~~al~l-----~p~---~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~--------~ 104 (477)
T 1wao_1 41 IYYGNRSLAYLRTECYGYALGDATRAIEL-----DKK---YIKGYYRRAASNMALGKFRAALRDYETVVKV--------K 104 (477)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHS-----CTT---CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------S
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHh-----CCC---CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------C
Confidence 44455677778889999999999999764 344 3567889999999999999999999999876 2
Q ss_pred hHHHHHHHHhhHH--HHhhcChHHHHHHHH-----------HHHHHHHHhcCCCCchH
Q 014710 353 PLLGLQYYTCGKL--EWFLGDTENAIKSMT-----------EAVEILRITHGTNSPFM 397 (420)
Q Consensus 353 p~~~~~l~~La~~--~~~~g~~~eA~~~l~-----------~A~~i~~~~~G~~h~~~ 397 (420)
|.....+..++.+ +..+|++++|+..++ +|+++-....|+.++..
T Consensus 105 p~~~~~~~~l~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~ 162 (477)
T 1wao_1 105 PHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEYSGPKLEDG 162 (477)
T ss_dssp TTCTTHHHHHHHHHHHHHHHHHCCC------CCSTTTCCTTSSCCCCTTCCSCCCGGG
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHhccccccchhHhhhhhhhccccccccccccccc
Confidence 3333456667666 888899999999999 88888888888888863
No 160
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=97.58 E-value=0.00053 Score=54.10 Aligned_cols=65 Identities=18% Similarity=0.063 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHH
Q 014710 313 LMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 385 (420)
Q Consensus 313 ~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i 385 (420)
....+..++..+...|+|++|+.++++++.. .|.-...++++|.++..+|++++|+..+++|+++
T Consensus 3 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 67 (126)
T 3upv_A 3 KAEEARLEGKEYFTKSDWPNAVKAYTEMIKR--------APEDARGYSNRAAALAKLMSFPEAIADCNKAIEK 67 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh--------CCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 3456778899999999999999999999876 3445688999999999999999999999999986
No 161
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=97.58 E-value=0.00041 Score=57.54 Aligned_cols=74 Identities=14% Similarity=0.079 Sum_probs=64.0
Q ss_pred hHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCC----------ChHHHHHHHHhhHHHHhhcChHHHHHHHHH
Q 014710 312 NLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQF----------HPLLGLQYYTCGKLEWFLGDTENAIKSMTE 381 (420)
Q Consensus 312 ~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~----------hp~~~~~l~~La~~~~~~g~~~eA~~~l~~ 381 (420)
.....+...+..+...|+|++|+.++.+++.......+.. .|.....++++|.++..+|++++|+..+.+
T Consensus 9 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~ 88 (162)
T 3rkv_A 9 KSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSE 88 (162)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 3456678899999999999999999999999877664322 567788999999999999999999999999
Q ss_pred HHHH
Q 014710 382 AVEI 385 (420)
Q Consensus 382 A~~i 385 (420)
|+.+
T Consensus 89 al~~ 92 (162)
T 3rkv_A 89 VLKR 92 (162)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 9886
No 162
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=97.54 E-value=0.0015 Score=53.66 Aligned_cols=100 Identities=12% Similarity=-0.003 Sum_probs=77.3
Q ss_pred HHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChH
Q 014710 275 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 354 (420)
Q Consensus 275 l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~ 354 (420)
....+..+...|++++|+..+++++.. .|.+ ..++..++.++...|++++|+.++++++.. .+.++.
T Consensus 50 ~~~~a~~~~~~~~~~~A~~~~~~a~~~-----~~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~-----~p~~~~ 116 (166)
T 1a17_A 50 YGNRSLAYLRTECYGYALGDATRAIEL-----DKKY---IKGYYRRAASNMALGKFRAALRDYETVVKV-----KPHDKD 116 (166)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----STTCHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHh-----Cccc---HHHHHHHHHHHHHhccHHHHHHHHHHHHHh-----CCCCHH
Confidence 344555667789999999999999875 2444 456788999999999999999999998765 233433
Q ss_pred HHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHH
Q 014710 355 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRI 388 (420)
Q Consensus 355 ~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~ 388 (420)
+...+.++..+...|++++|+..+.++..++..
T Consensus 117 -~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~ 149 (166)
T 1a17_A 117 -AKMKYQECNKIVKQKAFERAIAGDEHKRSVVDS 149 (166)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHcccchHHHhcc
Confidence 334466666688899999999999999888754
No 163
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=97.54 E-value=0.0011 Score=66.90 Aligned_cols=103 Identities=14% Similarity=0.091 Sum_probs=78.5
Q ss_pred hhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChH-HHHHH
Q 014710 281 ALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL-LGLQY 359 (420)
Q Consensus 281 ~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~-~~~~l 359 (420)
.+...|++++|++.+++++.. .|.++ .++..++.++...|++++|++++++++...... +..|. .+..+
T Consensus 450 ~~~~~g~~~~A~~~~~~~~~~-----~~~~~---~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~--~~~p~~~~~~~ 519 (597)
T 2xpi_A 450 QHMQLGNILLANEYLQSSYAL-----FQYDP---LLLNELGVVAFNKSDMQTAINHFQNALLLVKKT--QSNEKPWAATW 519 (597)
T ss_dssp HHHHHTCHHHHHHHHHHHHHH-----CCCCH---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS--CCCSGGGHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHh-----CCCCh---HHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhcc--ccchhhHHHHH
Confidence 334456777777777766543 34444 457788999999999999999999998876543 33455 48899
Q ss_pred HHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchHH
Q 014710 360 YTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMK 398 (420)
Q Consensus 360 ~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~~ 398 (420)
..+|.++...|++++|+.++++++++ +|+++.+.
T Consensus 520 ~~l~~~~~~~g~~~~A~~~~~~~~~~-----~p~~~~~~ 553 (597)
T 2xpi_A 520 ANLGHAYRKLKMYDAAIDALNQGLLL-----STNDANVH 553 (597)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH-----SSCCHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHh-----CCCChHHH
Confidence 99999999999999999999999876 46666443
No 164
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=97.54 E-value=0.00076 Score=52.68 Aligned_cols=88 Identities=11% Similarity=0.038 Sum_probs=68.7
Q ss_pred HHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCC
Q 014710 313 LMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGT 392 (420)
Q Consensus 313 ~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~ 392 (420)
....+..++..+...|++++|+.++++++... |.....++.+|.++...|++++|+.++++++.+... .++
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~--------~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~ 73 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKELD--------PTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRE-NRE 73 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH-STT
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC--------CccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccc-cch
Confidence 34567789999999999999999999988752 334578899999999999999999999999998764 345
Q ss_pred CCchHHHHHHHHHHHHH
Q 014710 393 NSPFMKELILKLEEAQA 409 (420)
Q Consensus 393 ~h~~~~~~~~~l~~~~~ 409 (420)
+++....+...++.+..
T Consensus 74 ~~~~~~~~~~~la~~~~ 90 (131)
T 1elr_A 74 DYRQIAKAYARIGNSYF 90 (131)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHH
Confidence 55444555555655533
No 165
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=97.53 E-value=0.00029 Score=67.98 Aligned_cols=87 Identities=9% Similarity=0.051 Sum_probs=55.0
Q ss_pred hcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHh
Q 014710 283 TSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTC 362 (420)
Q Consensus 283 ~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~L 362 (420)
...|++++|+..+++++.+ .|.+ ..++.+++.++...|++++|++++++++.+ +|.-...++++
T Consensus 177 ~~~g~~~eAl~~~~kal~l-----dP~~---~~a~~~lg~~~~~~g~~~eAl~~~~~al~l--------~P~~~~a~~~l 240 (382)
T 2h6f_A 177 EWLRDPSQELEFIADILNQ-----DAKN---YHAWQHRQWVIQEFKLWDNELQYVDQLLKE--------DVRNNSVWNQR 240 (382)
T ss_dssp HHHTCCTTHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHHTCCTTHHHHHHHHHHH--------CTTCHHHHHHH
T ss_pred HHccCHHHHHHHHHHHHHh-----CccC---HHHHHHHHHHHHHcCChHHHHHHHHHHHHh--------CCCCHHHHHHH
Confidence 3345555555555555543 2333 345566777777778888888877777765 35556677777
Q ss_pred hHHHHh-hcChHHH-----HHHHHHHHHH
Q 014710 363 GKLEWF-LGDTENA-----IKSMTEAVEI 385 (420)
Q Consensus 363 a~~~~~-~g~~~eA-----~~~l~~A~~i 385 (420)
|.++.. .|..++| +.++++|+.+
T Consensus 241 g~~l~~l~~~~~eA~~~~el~~~~~Al~l 269 (382)
T 2h6f_A 241 YFVISNTTGYNDRAVLEREVQYTLEMIKL 269 (382)
T ss_dssp HHHHHHTTCSCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCcchHHHHHHHHHHHHHHHHH
Confidence 777777 4444666 4667777664
No 166
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=97.53 E-value=0.00014 Score=61.29 Aligned_cols=96 Identities=9% Similarity=0.071 Sum_probs=71.7
Q ss_pred hhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHH
Q 014710 281 ALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYY 360 (420)
Q Consensus 281 ~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~ 360 (420)
.+...|++++|+..+++++.. .|.+ ..++..++.++...|++++|+.++++++... |.-...++
T Consensus 19 ~~~~~~~~~~A~~~~~~al~~-----~p~~---~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~--------p~~~~~~~ 82 (177)
T 2e2e_A 19 QFASQQNPEAQLQALQDKIRA-----NPQN---SEQWALLGEYYLWQNDYSNSLLAYRQALQLR--------GENAELYA 82 (177)
T ss_dssp CCC-----CCCCHHHHHHHHH-----CCSC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH--------CSCHHHHH
T ss_pred hhhhccCHHHHHHHHHHHHHh-----CCCc---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC--------CCCHHHHH
Confidence 345567888888888888764 3444 3577889999999999999999999988764 22356788
Q ss_pred HhhHH-HHhhcCh--HHHHHHHHHHHHHHHHhcCCCCchH
Q 014710 361 TCGKL-EWFLGDT--ENAIKSMTEAVEILRITHGTNSPFM 397 (420)
Q Consensus 361 ~La~~-~~~~g~~--~eA~~~l~~A~~i~~~~~G~~h~~~ 397 (420)
.+|.+ +...|++ ++|+.++++++++ .|+++..
T Consensus 83 ~la~~l~~~~~~~~~~~A~~~~~~al~~-----~p~~~~~ 117 (177)
T 2e2e_A 83 ALATVLYYQASQHMTAQTRAMIDKALAL-----DSNEITA 117 (177)
T ss_dssp HHHHHHHHHTTTCCCHHHHHHHHHHHHH-----CTTCHHH
T ss_pred HHHHHHHHhcCCcchHHHHHHHHHHHHh-----CCCcHHH
Confidence 99999 7789998 9999999999986 4555543
No 167
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=97.53 E-value=0.0012 Score=55.03 Aligned_cols=93 Identities=13% Similarity=0.026 Sum_probs=70.5
Q ss_pred HHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCC----C-ChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHH
Q 014710 314 MQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQ----F-HPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRI 388 (420)
Q Consensus 314 ~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~----~-hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~ 388 (420)
...+.+.+..+...|+|++|+..+.++|.+-.. +|. + .|..+..+.++|.++..+|++++|+..+.+|++++.+
T Consensus 11 a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~-~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~ 89 (159)
T 2hr2_A 11 AYLALSDAQRQLVAGEYDEAAANCRRAMEISHT-MPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNR 89 (159)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT-SCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCC-CcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhc
Confidence 455677888999999999999999999988644 111 1 2345669999999999999999999999999998665
Q ss_pred hcCCCCchHHHHH----HHHHHHH
Q 014710 389 THGTNSPFMKELI----LKLEEAQ 408 (420)
Q Consensus 389 ~~G~~h~~~~~~~----~~l~~~~ 408 (420)
. |+-.|...... ..+..+.
T Consensus 90 ~-~e~~pd~~~A~~~~~~~rG~aL 112 (159)
T 2hr2_A 90 R-GELNQDEGKLWISAVYSRALAL 112 (159)
T ss_dssp H-CCTTSTHHHHHHHHHHHHHHHH
T ss_pred c-ccCCCchHHHHHHHHHhHHHHH
Confidence 4 45555555544 5554443
No 168
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=97.49 E-value=0.00078 Score=55.96 Aligned_cols=68 Identities=10% Similarity=0.044 Sum_probs=60.0
Q ss_pred ChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHH
Q 014710 310 SVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 385 (420)
Q Consensus 310 h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i 385 (420)
++.....+..++.++...|+|++|+.++++++... |.....++.+|.++..+|++++|+..+++|+.+
T Consensus 7 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~--------p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 74 (164)
T 3sz7_A 7 PTPESDKLKSEGNAAMARKEYSKAIDLYTQALSIA--------PANPIYLSNRAAAYSASGQHEKAAEDAELATVV 74 (164)
T ss_dssp CCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--------CcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 45567788899999999999999999999998763 445678999999999999999999999999986
No 169
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=97.47 E-value=0.0012 Score=61.01 Aligned_cols=100 Identities=14% Similarity=0.011 Sum_probs=74.1
Q ss_pred HhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHH
Q 014710 279 TLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQ 358 (420)
Q Consensus 279 a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~ 358 (420)
+..+...|++++|++.+++++.. .|.+. ..........++...|++++|+..+++++.. + |.....
T Consensus 137 ~~~~~~~g~~~~A~~~l~~~~~~-----~p~~~-~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~----~----p~~~~~ 202 (291)
T 3mkr_A 137 VQILLKLDRLDLARKELKKMQDQ-----DEDAT-LTQLATAWVSLAAGGEKLQDAYYIFQEMADK----C----SPTLLL 202 (291)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHH-----CTTCH-HHHHHHHHHHHHHCTTHHHHHHHHHHHHHHH----S----CCCHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHhh-----CcCcH-HHHHHHHHHHHHhCchHHHHHHHHHHHHHHh----C----CCcHHH
Confidence 33455679999999999998765 35543 2222233334445569999999999998765 2 345668
Q ss_pred HHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchH
Q 014710 359 YYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFM 397 (420)
Q Consensus 359 l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~ 397 (420)
++.+|.++..+|++++|+..|++|+++ .|+++.+
T Consensus 203 ~~~la~~~~~~g~~~eA~~~l~~al~~-----~p~~~~~ 236 (291)
T 3mkr_A 203 LNGQAACHMAQGRWEAAEGVLQEALDK-----DSGHPET 236 (291)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHHH
Confidence 999999999999999999999999975 3566654
No 170
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=97.47 E-value=0.0021 Score=49.30 Aligned_cols=80 Identities=9% Similarity=-0.074 Sum_probs=64.0
Q ss_pred HHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCc
Q 014710 316 TREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSP 395 (420)
Q Consensus 316 ~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~ 395 (420)
-...|+..+...|+|..|+.+++.++.....-.. .-+.....+..||.++..+|++++|..++++|+. +.|+|+
T Consensus 7 dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~-~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~-----l~P~~~ 80 (104)
T 2v5f_A 7 DCFELGKVAYTEADYYHTELWMEQALRQLDEGEI-STIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLE-----LDPEHQ 80 (104)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCC-CSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-----HCTTCH
T ss_pred HHHHHHHHHHHccchHHHHHHHHHHHHhhhccCC-CcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHh-----cCCCCH
Confidence 3467899999999999999999999887642211 1245668889999999999999999999999986 478887
Q ss_pred hHHHHH
Q 014710 396 FMKELI 401 (420)
Q Consensus 396 ~~~~~~ 401 (420)
.+..-+
T Consensus 81 ~~~~n~ 86 (104)
T 2v5f_A 81 RANGNL 86 (104)
T ss_dssp HHHHHH
T ss_pred HHHhhH
Confidence 664433
No 171
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=97.47 E-value=0.0011 Score=54.44 Aligned_cols=75 Identities=13% Similarity=0.080 Sum_probs=63.5
Q ss_pred ChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHh
Q 014710 310 SVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRIT 389 (420)
Q Consensus 310 h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~ 389 (420)
++.....+..++.++...|++++|+.++++++.. .|.-...++.+|.++..+|++++|+..|++|+.+
T Consensus 17 ~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l---- 84 (148)
T 2vgx_A 17 SSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVL--------DHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVM---- 84 (148)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----
T ss_pred CHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHc--------CcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc----
Confidence 5666778889999999999999999999998765 3444567899999999999999999999999875
Q ss_pred cCCCCchH
Q 014710 390 HGTNSPFM 397 (420)
Q Consensus 390 ~G~~h~~~ 397 (420)
.|+++..
T Consensus 85 -~p~~~~~ 91 (148)
T 2vgx_A 85 -DIXEPRF 91 (148)
T ss_dssp -STTCTHH
T ss_pred -CCCCchH
Confidence 5677654
No 172
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=97.44 E-value=0.0013 Score=53.24 Aligned_cols=76 Identities=17% Similarity=0.131 Sum_probs=63.9
Q ss_pred CChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHH
Q 014710 309 FSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRI 388 (420)
Q Consensus 309 ~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~ 388 (420)
.++.-...+..++..+...|++++|+.++++++.. +|.-...++.+|.++...|++++|+..+++|+.+
T Consensus 13 ~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--- 81 (142)
T 2xcb_A 13 LSEDTLEQLYALGFNQYQAGKWDDAQKIFQALCML--------DHYDARYFLGLGACRQSLGLYEQALQSYSYGALM--- 81 (142)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---
T ss_pred CCHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHh--------CCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc---
Confidence 45666777888999999999999999999998764 3444567899999999999999999999999885
Q ss_pred hcCCCCchH
Q 014710 389 THGTNSPFM 397 (420)
Q Consensus 389 ~~G~~h~~~ 397 (420)
.|++|..
T Consensus 82 --~p~~~~~ 88 (142)
T 2xcb_A 82 --DINEPRF 88 (142)
T ss_dssp --CTTCTHH
T ss_pred --CCCCcHH
Confidence 5677654
No 173
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=97.44 E-value=0.001 Score=67.36 Aligned_cols=96 Identities=11% Similarity=-0.093 Sum_probs=79.8
Q ss_pred HHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChH
Q 014710 275 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 354 (420)
Q Consensus 275 l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~ 354 (420)
....+..+...|++++|++.++++++. .|.+ ..++..++.++...|++++|++++++++.. +|.
T Consensus 60 ~~~lg~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~~~~~la~~~~~~g~~~~A~~~~~~al~~--------~p~ 123 (568)
T 2vsy_A 60 VARLGRVRWTQQRHAEAAVLLQQASDA-----APEH---PGIALWLGHALEDAGQAEAAAAAYTRAHQL--------LPE 123 (568)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTT
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHhc-----CCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCC
Confidence 344555667789999999999999875 3444 567788999999999999999999998876 344
Q ss_pred HHHHHHHhhHHHHhh---cChHHHHHHHHHHHHHH
Q 014710 355 LGLQYYTCGKLEWFL---GDTENAIKSMTEAVEIL 386 (420)
Q Consensus 355 ~~~~l~~La~~~~~~---g~~~eA~~~l~~A~~i~ 386 (420)
....+..+|.++..+ |++++|...++++++.-
T Consensus 124 ~~~~~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~ 158 (568)
T 2vsy_A 124 EPYITAQLLNWRRRLCDWRALDVLSAQVRAAVAQG 158 (568)
T ss_dssp CHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcC
Confidence 467889999999999 99999999999998754
No 174
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=97.41 E-value=0.0018 Score=63.68 Aligned_cols=116 Identities=15% Similarity=0.098 Sum_probs=88.1
Q ss_pred HHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHH---hhcHHHHHHHHHHhHHHHHHhcCCC
Q 014710 275 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILME---LEDWKEALAYCQLTIPVYQRVYPQF 351 (420)
Q Consensus 275 l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~---~g~~~~A~~~~~~~l~~~~~~~g~~ 351 (420)
....+..+...|++++|+..+++++...... +.......++..++.++.. .|++++|+.++++++..
T Consensus 375 ~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~-------- 444 (514)
T 2gw1_A 375 PNFFAEILTDKNDFDKALKQYDLAIELENKL--DGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASKL-------- 444 (514)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTS--SSCSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHH--------
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHhhhcc--chHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHh--------
Confidence 3445566677899999999999998764321 1222224477889999999 99999999999998875
Q ss_pred ChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHH
Q 014710 352 HPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLE 405 (420)
Q Consensus 352 hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~~~~~~~l~ 405 (420)
.|.....++.+|.++...|++++|..++++|+++ .|+++.....+..+.
T Consensus 445 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~-----~~~~~~~~~~~~~~~ 493 (514)
T 2gw1_A 445 DPRSEQAKIGLAQMKLQQEDIDEAITLFEESADL-----ARTMEEKLQAITFAE 493 (514)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CSSHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh-----ccccHHHHHHHHHHH
Confidence 2444568899999999999999999999999985 567776665554333
No 175
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=97.41 E-value=0.0018 Score=61.10 Aligned_cols=103 Identities=9% Similarity=-0.037 Sum_probs=83.6
Q ss_pred HHHHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCC
Q 014710 272 VNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQF 351 (420)
Q Consensus 272 ~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~ 351 (420)
.......+..+...|++++|+..+++++.+ .|.+ ..++..++.+|..+|++++|+.++++++.+
T Consensus 196 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~a~~~lg~~~~~~g~~~~A~~~~~~al~l-------- 259 (336)
T 1p5q_A 196 LASHLNLAMCHLKLQAFSAAIESCNKALEL-----DSNN---EKGLSRRGEAHLAVNDFELARADFQKVLQL-------- 259 (336)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCc---HHHHHHHHHHHHHCCCHHHHHHHHHHHHHH--------
Confidence 445566777788899999999999999875 3444 567789999999999999999999999876
Q ss_pred ChHHHHHHHHhhHHHHhhcChHHH-HHHHHHHHHHHHHhc
Q 014710 352 HPLLGLQYYTCGKLEWFLGDTENA-IKSMTEAVEILRITH 390 (420)
Q Consensus 352 hp~~~~~l~~La~~~~~~g~~~eA-~~~l~~A~~i~~~~~ 390 (420)
.|.-...+..||.++..+|++++| ..+|++.++.+....
T Consensus 260 ~P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 299 (336)
T 1p5q_A 260 YPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFERLAEEE 299 (336)
T ss_dssp CSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 344456889999999999999998 567888877666544
No 176
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=97.38 E-value=0.00081 Score=52.85 Aligned_cols=71 Identities=14% Similarity=0.075 Sum_probs=61.9
Q ss_pred CCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHH
Q 014710 307 HPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 385 (420)
Q Consensus 307 ~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i 385 (420)
.+..+.....+..++..+...|++++|+.++++++.. .|.-...++.+|.++...|++++|+.++++|+++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~--------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~ 79 (133)
T 2lni_A 9 SHMNPDLALMVKNKGNECFQKGDYPQAMKHYTEAIKR--------NPKDAKLYSNRAACYTKLLEFQLALKDCEECIQL 79 (133)
T ss_dssp CCSSSCHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTT--------CTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHH
T ss_pred CCcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc--------CCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 4566778888999999999999999999999998764 3344678999999999999999999999999985
No 177
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=97.38 E-value=0.0014 Score=65.10 Aligned_cols=94 Identities=12% Similarity=0.156 Sum_probs=78.7
Q ss_pred HHHHHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCC
Q 014710 271 EVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQ 350 (420)
Q Consensus 271 ~~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~ 350 (420)
....+...+..+...|++++|++.|++++.. .|.+ ..++..++.++...|++++|++.+++++..
T Consensus 24 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~~~~~la~~~~~~g~~~~A~~~~~~al~~------- 88 (537)
T 3fp2_A 24 YAVQLKNRGNHFFTAKNFNEAIKYYQYAIEL-----DPNE---PVFYSNISACYISTGDLEKVIEFTTKALEI------- 88 (537)
T ss_dssp HHHHHHHHHHHHHHTTCCC-CHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-------
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhh-----CCCC---cHHHHHHHHHHHHcCCHHHHHHHHHHHHhc-------
Confidence 4566677888888999999999999999875 3444 467888999999999999999999999875
Q ss_pred CChHHHHHHHHhhHHHHhhcChHHHHHHHH
Q 014710 351 FHPLLGLQYYTCGKLEWFLGDTENAIKSMT 380 (420)
Q Consensus 351 ~hp~~~~~l~~La~~~~~~g~~~eA~~~l~ 380 (420)
+|.-...++.+|.++..+|++++|+..++
T Consensus 89 -~p~~~~~~~~la~~~~~~g~~~~A~~~~~ 117 (537)
T 3fp2_A 89 -KPDHSKALLRRASANESLGNFTDAMFDLS 117 (537)
T ss_dssp -CTTCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred -CCchHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 35556789999999999999999999883
No 178
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=97.32 E-value=0.0025 Score=46.41 Aligned_cols=79 Identities=19% Similarity=0.199 Sum_probs=60.8
Q ss_pred HHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHH
Q 014710 276 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL 355 (420)
Q Consensus 276 ~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~ 355 (420)
...+..+...|++++|+..+++++.. .|.+ ..++..++.++...|++++|+.++++++.. +|..
T Consensus 13 ~~la~~~~~~~~~~~A~~~~~~a~~~-----~~~~---~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~--------~p~~ 76 (91)
T 1na3_A 13 YNLGNAYYKQGDYDEAIEYYQKALEL-----DPNN---AEAWYNLGNAYYKQGDYDEAIEYYQKALEL--------DPNN 76 (91)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTC
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHhc-----CCCC---HHHHHHHHHHHHHHhhHHHHHHHHHHHHhc--------CCCC
Confidence 34455566789999999999999865 3444 456778999999999999999999998875 2444
Q ss_pred HHHHHHhhHHHHhhc
Q 014710 356 GLQYYTCGKLEWFLG 370 (420)
Q Consensus 356 ~~~l~~La~~~~~~g 370 (420)
...+..+|.++..+|
T Consensus 77 ~~~~~~l~~~~~~~g 91 (91)
T 1na3_A 77 AEAKQNLGNAKQKQG 91 (91)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcC
Confidence 567788888876654
No 179
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=97.32 E-value=0.00051 Score=71.49 Aligned_cols=94 Identities=10% Similarity=-0.022 Sum_probs=68.7
Q ss_pred HHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChH
Q 014710 275 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 354 (420)
Q Consensus 275 l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~ 354 (420)
....+..+...|++++|+..++++++. .|.+ ..++..++.++...|++++|++.+++++..- |.
T Consensus 436 ~~~~a~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~--------P~ 499 (681)
T 2pzi_A 436 PLMEVRALLDLGDVAKATRKLDDLAER-----VGWR---WRLVWYRAVAELLTGDYDSATKHFTEVLDTF--------PG 499 (681)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHH-----HCCC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS--------TT
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHhcc-----Ccch---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--------CC
Confidence 344556667789999999999999875 2444 4677789999999999999999999988762 33
Q ss_pred HHHHHHHhhHHHHhhcChHHHHHHHHHHHHH
Q 014710 355 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 385 (420)
Q Consensus 355 ~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i 385 (420)
-...++++|.++..+|++++ +.+|++|+++
T Consensus 500 ~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~ 529 (681)
T 2pzi_A 500 ELAPKLALAATAELAGNTDE-HKFYQTVWST 529 (681)
T ss_dssp CSHHHHHHHHHHHHHTCCCT-TCHHHHHHHH
T ss_pred ChHHHHHHHHHHHHcCChHH-HHHHHHHHHh
Confidence 34455666666666676666 6666666653
No 180
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.29 E-value=0.0017 Score=52.11 Aligned_cols=71 Identities=15% Similarity=0.062 Sum_probs=61.3
Q ss_pred ChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHH
Q 014710 310 SVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 385 (420)
Q Consensus 310 h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i 385 (420)
++.....+..++..+...|++++|+.++++++.. .+.++.....++.+|.++...|++++|+.++++++.+
T Consensus 24 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~-----~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 94 (148)
T 2dba_A 24 GASSVEQLRKEGNELFKCGDYGGALAAYTQALGL-----DATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEK 94 (148)
T ss_dssp TCCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTS-----CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH-----cccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhh
Confidence 3445677788999999999999999999998764 3556667899999999999999999999999999986
No 181
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=97.29 E-value=0.0028 Score=62.91 Aligned_cols=93 Identities=19% Similarity=0.108 Sum_probs=58.5
Q ss_pred HHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHH
Q 014710 277 KKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLG 356 (420)
Q Consensus 277 ~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~ 356 (420)
..+..+...|++++|++.+++++.. .|.+ ..++..++.++...|++++|+.++++++... |...
T Consensus 281 ~l~~~~~~~~~~~~A~~~~~~~~~~-----~~~~---~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~--------~~~~ 344 (537)
T 3fp2_A 281 FLALTLADKENSQEFFKFFQKAVDL-----NPEY---PPTYYHRGQMYFILQDYKNAKEDFQKAQSLN--------PENV 344 (537)
T ss_dssp HHHHHTCCSSCCHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------TTCS
T ss_pred HHHHHHHHhcCHHHHHHHHHHHhcc-----CCCC---HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhC--------CCCH
Confidence 3344455567777777777776553 2333 3445667777777777777777777766531 2223
Q ss_pred HHHHHhhHHHHhhcChHHHHHHHHHHHHH
Q 014710 357 LQYYTCGKLEWFLGDTENAIKSMTEAVEI 385 (420)
Q Consensus 357 ~~l~~La~~~~~~g~~~eA~~~l~~A~~i 385 (420)
..+..+|.++...|++++|+.++++++++
T Consensus 345 ~~~~~la~~~~~~g~~~~A~~~~~~~~~~ 373 (537)
T 3fp2_A 345 YPYIQLACLLYKQGKFTESEAFFNETKLK 373 (537)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 45666777777777777777777777654
No 182
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=97.28 E-value=0.00069 Score=70.51 Aligned_cols=95 Identities=13% Similarity=0.014 Sum_probs=74.7
Q ss_pred hcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHh
Q 014710 283 TSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTC 362 (420)
Q Consensus 283 ~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~L 362 (420)
...|++++|++.+++++...-..-...++....++..++.++...|++++|++.+++++... |.-...++.+
T Consensus 402 ~~~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~--------p~~~~a~~~l 473 (681)
T 2pzi_A 402 TVLSQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLDLGDVAKATRKLDDLAERV--------GWRWRLVWYR 473 (681)
T ss_dssp TTTCCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH--------CCCHHHHHHH
T ss_pred ccccCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHhcCCHHHHHHHHHHHhccC--------cchHHHHHHH
Confidence 55789999999999887221111223345555678889999999999999999999998763 4556789999
Q ss_pred hHHHHhhcChHHHHHHHHHHHHH
Q 014710 363 GKLEWFLGDTENAIKSMTEAVEI 385 (420)
Q Consensus 363 a~~~~~~g~~~eA~~~l~~A~~i 385 (420)
|.++..+|++++|+..|++|+++
T Consensus 474 g~~~~~~g~~~~A~~~~~~al~l 496 (681)
T 2pzi_A 474 AVAELLTGDYDSATKHFTEVLDT 496 (681)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHh
Confidence 99999999999999999999985
No 183
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=97.27 E-value=0.0016 Score=51.77 Aligned_cols=66 Identities=20% Similarity=0.167 Sum_probs=57.8
Q ss_pred hHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHH
Q 014710 312 NLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 385 (420)
Q Consensus 312 ~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i 385 (420)
.....+..++..+...|+|++|+.++++++.. .|.....++.+|.++..+|++++|+..+++|+.+
T Consensus 7 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~--------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~ 72 (137)
T 3q49_B 7 PSAQELKEQGNRLFVGRKYPEAAACYGRAITR--------NPLVAVYYTNRALCYLKMQQPEQALADCRRALEL 72 (137)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhh--------CcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 34567788999999999999999999998876 3445678999999999999999999999999986
No 184
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=97.26 E-value=0.0032 Score=49.57 Aligned_cols=69 Identities=12% Similarity=-0.008 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCc
Q 014710 316 TREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSP 395 (420)
Q Consensus 316 ~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~ 395 (420)
....++..+...|++++|+..+++++.. .|.-...++.||.++...|++++|+..+++|+++ .|+++
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~--------~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l-----~P~~~ 85 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQK--------EPEREEAWRSLGLTQAENEKDGLAIIALNHARML-----DPKDI 85 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHH--------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCH
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHH--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCH
Confidence 3567888999999999999999998875 3555778999999999999999999999999885 56666
Q ss_pred hH
Q 014710 396 FM 397 (420)
Q Consensus 396 ~~ 397 (420)
..
T Consensus 86 ~~ 87 (121)
T 1hxi_A 86 AV 87 (121)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 185
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=97.25 E-value=0.0011 Score=49.64 Aligned_cols=67 Identities=28% Similarity=0.367 Sum_probs=55.5
Q ss_pred HHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHH-HHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCch
Q 014710 318 EKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGL-QYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPF 396 (420)
Q Consensus 318 ~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~-~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~ 396 (420)
...+..+...|++++|+.++++++.. +|.-.. .++.+|.++..+|++++|+..+++|+++ .|+++.
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~-----~p~~~~ 70 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQT--------EPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIEL-----NPDSPA 70 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHH--------CSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-----CTTSTH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHH--------CCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc-----CCCcHH
Confidence 35677889999999999999998875 233445 8899999999999999999999999975 566664
Q ss_pred H
Q 014710 397 M 397 (420)
Q Consensus 397 ~ 397 (420)
.
T Consensus 71 ~ 71 (99)
T 2kc7_A 71 L 71 (99)
T ss_dssp H
T ss_pred H
Confidence 4
No 186
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=97.23 E-value=0.0027 Score=57.24 Aligned_cols=81 Identities=16% Similarity=0.107 Sum_probs=56.6
Q ss_pred CCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHH----hhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHH
Q 014710 285 CGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILME----LEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYY 360 (420)
Q Consensus 285 ~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~----~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~ 360 (420)
.+++++|++.++++... . -..+...++.+|.. .+++++|+.++++++.. . ....++
T Consensus 55 ~~~~~~A~~~~~~a~~~-------~---~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~-------~---~~~a~~ 114 (273)
T 1ouv_A 55 EKNLKKAASFYAKACDL-------N---YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDL-------K---YAEGCA 114 (273)
T ss_dssp CCCHHHHHHHHHHHHHT-------T---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT-------T---CHHHHH
T ss_pred CCCHHHHHHHHHHHHHC-------C---CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHc-------C---CccHHH
Confidence 66777777777776543 1 24556677777777 77788887777777653 1 235677
Q ss_pred HhhHHHHh----hcChHHHHHHHHHHHHH
Q 014710 361 TCGKLEWF----LGDTENAIKSMTEAVEI 385 (420)
Q Consensus 361 ~La~~~~~----~g~~~eA~~~l~~A~~i 385 (420)
.||.++.. .+++++|+.++++|++.
T Consensus 115 ~lg~~~~~~~~~~~~~~~A~~~~~~a~~~ 143 (273)
T 1ouv_A 115 SLGGIYHDGKVVTRDFKKAVEYFTKACDL 143 (273)
T ss_dssp HHHHHHHHCSSSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCcccCHHHHHHHHHHHHhc
Confidence 78888877 78888888888887763
No 187
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=97.20 E-value=0.0027 Score=49.27 Aligned_cols=68 Identities=15% Similarity=0.181 Sum_probs=58.4
Q ss_pred ChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHH
Q 014710 310 SVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 385 (420)
Q Consensus 310 h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i 385 (420)
.+.....+..++..+...|++++|+.++++++.. +|.....++.+|.++...|++++|+.++.+++.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 75 (131)
T 2vyi_A 8 DSAEAERLKTEGNEQMKVENFEAAVHFYGKAIEL--------NPANAVYFCNRAAAYSKLGNYAGAVQDCERAICI 75 (131)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred chhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHc--------CCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhc
Confidence 4455677788999999999999999999998875 2344678999999999999999999999999985
No 188
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=97.15 E-value=0.0029 Score=48.62 Aligned_cols=64 Identities=23% Similarity=0.367 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHH
Q 014710 314 MQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 385 (420)
Q Consensus 314 ~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i 385 (420)
..++..++..+...|++++|++++++++.. .|.....++.+|.++...|++++|+.++++++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 72 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALEL--------DPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALEL 72 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH--------CcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 566778899999999999999999998765 2333567899999999999999999999999875
No 189
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=97.10 E-value=0.0042 Score=47.25 Aligned_cols=64 Identities=14% Similarity=0.113 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHH
Q 014710 314 MQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 385 (420)
Q Consensus 314 ~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i 385 (420)
...+..++..+...|++++|+.++++++... |.-...++.+|.++...|++++|..++++++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~--------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 67 (118)
T 1elw_A 4 VNELKEKGNKALSVGNIDDALQCYSEAIKLD--------PHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDL 67 (118)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHC--------CCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHh
Confidence 4567788999999999999999999987652 333568899999999999999999999999886
No 190
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=97.10 E-value=0.0065 Score=55.57 Aligned_cols=95 Identities=9% Similarity=-0.103 Sum_probs=73.9
Q ss_pred HHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhH-HHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChH-H
Q 014710 278 KTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNL-MQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL-L 355 (420)
Q Consensus 278 ~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~-~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~-~ 355 (420)
.+......++|++|+..++.+ ....++.. ..++..++.++..+|++++|+.++++++. |+.-|. .
T Consensus 141 ~a~l~~~~~r~~dA~~~l~~a-------~~~~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~------g~~~P~~~ 207 (282)
T 4f3v_A 141 KAVVYGAAERWTDVIDQVKSA-------GKWPDKFLAGAAGVAHGVAAANLALFTEAERRLTEAND------SPAGEACA 207 (282)
T ss_dssp HHHHHHHTTCHHHHHHHHTTG-------GGCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT------STTTTTTH
T ss_pred HHHHHHHcCCHHHHHHHHHHh-------hccCCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhc------CCCCcccc
Confidence 334556678999998887633 11124443 45889999999999999999999998752 332266 7
Q ss_pred HHHHHHhhHHHHhhcChHHHHHHHHHHHHH
Q 014710 356 GLQYYTCGKLEWFLGDTENAIKSMTEAVEI 385 (420)
Q Consensus 356 ~~~l~~La~~~~~~g~~~eA~~~l~~A~~i 385 (420)
....+.+|.++..+|+.++|...|+++++.
T Consensus 208 ~da~~~~glaL~~lGr~deA~~~l~~a~a~ 237 (282)
T 4f3v_A 208 RAIAWYLAMARRSQGNESAAVALLEWLQTT 237 (282)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 778999999999999999999999999874
No 191
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=97.06 E-value=0.00084 Score=50.86 Aligned_cols=62 Identities=13% Similarity=0.133 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHH
Q 014710 316 TREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 385 (420)
Q Consensus 316 ~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i 385 (420)
++..++.++...|++++|+.++++++... |.....++.+|.++..+|++++|+.++++++++
T Consensus 8 ~~~~~~~~~~~~~~~~~A~~~~~~a~~~~--------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~ 69 (112)
T 2kck_A 8 EYYLEGVLQYDAGNYTESIDLFEKAIQLD--------PEESKYWLMKGKALYNLERYEEAVDCYNYVINV 69 (112)
T ss_dssp GGGGHHHHHHSSCCHHHHHHHHHHHHHHC--------CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhC--------cCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 34568888999999999999999987752 333567899999999999999999999999876
No 192
>3db5_A PR domain zinc finger protein 4; methyltransferase, PRDM4, structural genomics, structural GE consortium, SGC, DNA-binding, metal-binding, nucleus; 2.15A {Homo sapiens}
Probab=97.00 E-value=0.00037 Score=57.70 Aligned_cols=40 Identities=15% Similarity=0.033 Sum_probs=34.6
Q ss_pred hccccCCCCcC---CceeEEeCCEEEEEEecCCCCCCccCCCh
Q 014710 182 VISIINHSCLP---NAVLVFEGRLAVVRAVQHVPKGAEGQFDD 221 (420)
Q Consensus 182 ~~s~~NHSC~P---N~~~~f~~~~~~vra~r~I~~Gee~~~~~ 221 (420)
.+.++||+|.| |+...-.++++.++|+|+|++|||+.+.+
T Consensus 97 WmR~Vn~A~~~~eqNl~a~q~~~~I~~~a~rdI~pGeELlv~Y 139 (151)
T 3db5_A 97 WMMFVRKARNREEQNLVAYPHDGKIFFCTSQDIPPENELLFYY 139 (151)
T ss_dssp GGGGCEECSSTTTCCEEEEEETTEEEEEESSCBCTTCBCEEEE
T ss_pred ceeEEEecCCcccCceEEEEECCEEEEEEccccCCCCEEEEec
Confidence 56789999965 99887779999999999999999987543
No 193
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=96.90 E-value=0.0018 Score=50.44 Aligned_cols=62 Identities=19% Similarity=0.095 Sum_probs=48.5
Q ss_pred HhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchH
Q 014710 326 ELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFM 397 (420)
Q Consensus 326 ~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~ 397 (420)
..|++++|+.++++++.. +..+|.....++.||.++..+|++++|+.++++|+++ .|+++.+
T Consensus 2 ~~g~~~~A~~~~~~al~~-----~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~-----~p~~~~~ 63 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIAS-----GLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQ-----FPNHQAL 63 (117)
T ss_dssp -----CCCHHHHHHHHSS-----CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCHHH
T ss_pred CCCcHHHHHHHHHHHHHc-----CCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCchHH
Confidence 468899999999988763 3446899999999999999999999999999999976 5566543
No 194
>3ep0_A PR domain zinc finger protein 12; PR domain-containing protein 12, structural genomics, structural genomics consortium, SGC, DNA-binding; 2.10A {Homo sapiens}
Probab=96.87 E-value=0.00054 Score=57.61 Aligned_cols=40 Identities=18% Similarity=0.096 Sum_probs=34.4
Q ss_pred hccccCCCCc---CCceeEEeCCEEEEEEecCCCCCCccCCCh
Q 014710 182 VISIINHSCL---PNAVLVFEGRLAVVRAVQHVPKGAEGQFDD 221 (420)
Q Consensus 182 ~~s~~NHSC~---PN~~~~f~~~~~~vra~r~I~~Gee~~~~~ 221 (420)
++.++||+|. +|+...-.++++.++|+|+|++|||+.+.+
T Consensus 101 WmR~Vn~A~~~~eqNl~a~q~~~~I~~~a~RdI~pGeELlvwY 143 (170)
T 3ep0_A 101 WMTYIKCARNEQEQNLEVVQIGTSIFYKAIEMIPPDQELLVWY 143 (170)
T ss_dssp GGGGCEECSSTTTCCEEEEEETTEEEEEESSCBCTTCBCEEEE
T ss_pred eeeeEEecCCcccCCeeeEEECCEEEEEECcCcCCCCEEEEee
Confidence 4568899997 898877778999999999999999987544
No 195
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=96.87 E-value=0.0041 Score=57.06 Aligned_cols=69 Identities=14% Similarity=0.038 Sum_probs=58.6
Q ss_pred ChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHH--HHHHHHhhHHHHhhcChHHHHHHHHHHHHHH
Q 014710 310 SVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL--GLQYYTCGKLEWFLGDTENAIKSMTEAVEIL 386 (420)
Q Consensus 310 h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~--~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~ 386 (420)
+|.-..++.+++.++...|++++|+..+++++.. +|.. +..+..|+.++..+|+.++|...|++++..+
T Consensus 215 ~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~--------~p~~~~~~a~~~l~~~~~~~g~~~~a~~~~r~al~~~ 285 (287)
T 3qou_A 215 NPEDAALATQLALQLHQVGRNEEALELLFGHLRX--------DLTAADGQTRXTFQEILAALGTGDALASXYRRQLYAL 285 (287)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTGGGGHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhc--------ccccccchHHHHHHHHHHHcCCCCcHHHHHHHHHHHh
Confidence 3444567889999999999999999999998876 3444 6788999999999999999999999998764
No 196
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=96.86 E-value=0.0052 Score=56.24 Aligned_cols=89 Identities=13% Similarity=0.045 Sum_probs=67.6
Q ss_pred HhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHH-HH
Q 014710 279 TLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL-GL 357 (420)
Q Consensus 279 a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~-~~ 357 (420)
|..+...|++++|.+++..+.. .+|.++ ....++.++.+.++|++|+.+++++.. ..+|.. ..
T Consensus 109 A~~L~~~g~y~eA~~~l~~~~~-----~~p~~~----~~~~~a~l~~~~~r~~dA~~~l~~a~~-------~~d~~~~~~ 172 (282)
T 4f3v_A 109 AACEAAQGNYADAMEALEAAPV-----AGSEHL----VAWMKAVVYGAAERWTDVIDQVKSAGK-------WPDKFLAGA 172 (282)
T ss_dssp HHHHHHHTCHHHHHHHHTSSCC-----TTCHHH----HHHHHHHHHHHTTCHHHHHHHHTTGGG-------CSCHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHh-----cCCchH----HHHHHHHHHHHcCCHHHHHHHHHHhhc-------cCCcccHHH
Confidence 3334556889999887765532 233333 678888899999999999999875422 225654 45
Q ss_pred HHHHhhHHHHhhcChHHHHHHHHHHH
Q 014710 358 QYYTCGKLEWFLGDTENAIKSMTEAV 383 (420)
Q Consensus 358 ~l~~La~~~~~~g~~~eA~~~l~~A~ 383 (420)
..+.||.++..+|++++|+..|++|.
T Consensus 173 a~~~LG~al~~LG~~~eAl~~l~~a~ 198 (282)
T 4f3v_A 173 AGVAHGVAAANLALFTEAERRLTEAN 198 (282)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHh
Confidence 89999999999999999999999986
No 197
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=96.86 E-value=0.004 Score=59.58 Aligned_cols=72 Identities=15% Similarity=0.217 Sum_probs=61.7
Q ss_pred HHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHh--------cCCCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHH
Q 014710 314 MQTREKLIKILMELEDWKEALAYCQLTIPVYQRV--------YPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 385 (420)
Q Consensus 314 ~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~--------~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i 385 (420)
...+..++..+...|+|++|+.++++++...... .....|..+..++++|.++..+|++++|+.++++|+++
T Consensus 223 a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~ 302 (370)
T 1ihg_A 223 SEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEI 302 (370)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHh
Confidence 4456778999999999999999999999876553 11257888999999999999999999999999999985
No 198
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=96.79 E-value=0.0092 Score=53.67 Aligned_cols=81 Identities=20% Similarity=0.194 Sum_probs=65.3
Q ss_pred CCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHH----hhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHH
Q 014710 285 CGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILME----LEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYY 360 (420)
Q Consensus 285 ~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~----~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~ 360 (420)
.+++++|++.++++... . -..++..++.+|.. .+++++|+.++++++.. + + ...++
T Consensus 91 ~~~~~~A~~~~~~a~~~-------~---~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~-----~--~---~~a~~ 150 (273)
T 1ouv_A 91 SQNTNKALQYYSKACDL-------K---YAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDL-----N--D---GDGCT 150 (273)
T ss_dssp CCCHHHHHHHHHHHHHT-------T---CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT-----T--C---HHHHH
T ss_pred ccCHHHHHHHHHHHHHc-------C---CccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhc-----C--c---HHHHH
Confidence 88888998888888653 1 24677888999998 89999999999988763 1 2 35778
Q ss_pred HhhHHHHh----hcChHHHHHHHHHHHHH
Q 014710 361 TCGKLEWF----LGDTENAIKSMTEAVEI 385 (420)
Q Consensus 361 ~La~~~~~----~g~~~eA~~~l~~A~~i 385 (420)
.||.++.. .+++++|+.++++|++.
T Consensus 151 ~lg~~~~~~~~~~~~~~~A~~~~~~a~~~ 179 (273)
T 1ouv_A 151 ILGSLYDAGRGTPKDLKKALASYDKACDL 179 (273)
T ss_dssp HHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCCCCCHHHHHHHHHHHHHC
Confidence 89999988 89999999999999875
No 199
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=96.77 E-value=0.0048 Score=51.76 Aligned_cols=67 Identities=13% Similarity=-0.041 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHH
Q 014710 314 MQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEIL 386 (420)
Q Consensus 314 ~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~ 386 (420)
..++..++.++...|++++|+.++++++.. .|.. .-...+..||.++..+|+.++|+..|++++..+
T Consensus 108 ~~~~~~la~~~~~~g~~~~A~~~~~~~l~~----~p~~--~~~~a~~~l~~~~~~~g~~~~A~~~y~~al~~~ 174 (176)
T 2r5s_A 108 FELACELAVQYNQVGRDEEALELLWNILKV----NLGA--QDGEVKKTFMDILSALGQGNAIASKYRRQLYSI 174 (176)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTT----CTTT--TTTHHHHHHHHHHHHHCSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHh----Cccc--ChHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHH
Confidence 467788999999999999999999988654 1211 113478899999999999999999999998754
No 200
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=96.74 E-value=0.0033 Score=57.55 Aligned_cols=64 Identities=20% Similarity=0.188 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHH
Q 014710 314 MQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 385 (420)
Q Consensus 314 ~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i 385 (420)
...+..++..+...|++++|+.++++++.. +|.....++++|.++..+|++++|+..+++|+++
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~ 67 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITR--------NPLVAVYYTNRALCYLKMQQPEQALADCRRALEL 67 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 456678899999999999999999999876 4555678999999999999999999999999875
No 201
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.74 E-value=0.012 Score=44.19 Aligned_cols=82 Identities=10% Similarity=0.016 Sum_probs=64.0
Q ss_pred HHHHHHHHHHHHhhc---HHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcC
Q 014710 315 QTREKLIKILMELED---WKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHG 391 (420)
Q Consensus 315 ~~~~~L~~~~~~~g~---~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G 391 (420)
.++..++.++...++ .++|..+++++|.. .|.-...++.||.+++..|++++|+.+|+++++. .
T Consensus 7 ~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~--------dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~-----~ 73 (93)
T 3bee_A 7 TQLAAKATTLYYLHKQAMTDEVSLLLEQALQL--------EPYNEAALSLIANDHFISFRFQEAIDTWVLLLDS-----N 73 (93)
T ss_dssp HHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTC-----C
T ss_pred HHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHH--------CcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-----C
Confidence 444556666655444 68999999999886 5777778899999999999999999999998763 4
Q ss_pred CCCchHHHHHHHHHHHHH
Q 014710 392 TNSPFMKELILKLEEAQA 409 (420)
Q Consensus 392 ~~h~~~~~~~~~l~~~~~ 409 (420)
|+.|....+...+++++.
T Consensus 74 p~~~~~~~i~~~I~~A~~ 91 (93)
T 3bee_A 74 DPNLDRVTIIESINKAKK 91 (93)
T ss_dssp CTTCCHHHHHHHHHHHHH
T ss_pred CCCccHHHHHHHHHHHHh
Confidence 457777778888887765
No 202
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=96.73 E-value=0.0035 Score=46.80 Aligned_cols=60 Identities=18% Similarity=0.279 Sum_probs=48.3
Q ss_pred HHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHH
Q 014710 277 KKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPV 343 (420)
Q Consensus 277 ~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~ 343 (420)
..+..+...|++++|+..+++++.. .|.++. .++..++.++...|++++|++++++++..
T Consensus 5 ~~a~~~~~~~~~~~A~~~~~~al~~-----~p~~~~--~~~~~lg~~~~~~~~~~~A~~~~~~al~~ 64 (99)
T 2kc7_A 5 KTIKELINQGDIENALQALEEFLQT-----EPVGKD--EAYYLMGNAYRKLGDWQKALNNYQSAIEL 64 (99)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHH-----CSSTHH--HHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHH-----CCCcHH--HHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 4455666789999999999999774 355432 27788999999999999999999998865
No 203
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=96.71 E-value=0.0069 Score=51.76 Aligned_cols=88 Identities=9% Similarity=-0.111 Sum_probs=68.5
Q ss_pred HHHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCC
Q 014710 273 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 352 (420)
Q Consensus 273 ~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~h 352 (420)
......+..+...|++++|+..+++++.. .|.+ ..++..++.++...|++++|++++++++.+ +
T Consensus 89 ~~~~~la~~~~~~~~~~~A~~~~~~al~~-----~p~~---~~~~~~lg~~~~~~~~~~~A~~~~~~al~~--------~ 152 (198)
T 2fbn_A 89 SCNLNLATCYNKNKDYPKAIDHASKVLKI-----DKNN---VKALYKLGVANMYFGFLEEAKENLYKAASL--------N 152 (198)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----STTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------S
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHh-----Cccc---HHHHHHHHHHHHHcccHHHHHHHHHHHHHH--------C
Confidence 33445566677889999999999999875 3333 567788999999999999999999998876 3
Q ss_pred hHHHHHHHHhhHHHHhhcChHHHH
Q 014710 353 PLLGLQYYTCGKLEWFLGDTENAI 376 (420)
Q Consensus 353 p~~~~~l~~La~~~~~~g~~~eA~ 376 (420)
|.-...+..++.++..+++.+++.
T Consensus 153 p~~~~~~~~l~~~~~~~~~~~~~~ 176 (198)
T 2fbn_A 153 PNNLDIRNSYELCVNKLKEARKKD 176 (198)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHC--
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHH
Confidence 444567888899988888887776
No 204
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=96.67 E-value=0.032 Score=45.80 Aligned_cols=85 Identities=14% Similarity=0.069 Sum_probs=67.6
Q ss_pred hHHHHHHHHHHHHHHhh---cHHHHHHHHHHhHHHHHHhcCCCCh-HHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHH
Q 014710 312 NLMQTREKLIKILMELE---DWKEALAYCQLTIPVYQRVYPQFHP-LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILR 387 (420)
Q Consensus 312 ~~~~~~~~L~~~~~~~g---~~~~A~~~~~~~l~~~~~~~g~~hp-~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~ 387 (420)
...++..+++-.+.+.+ ++++++.+++.++..- +| .....+|.||..+..+|+|++|+.++++++++
T Consensus 30 ~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~-------~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~i-- 100 (152)
T 1pc2_A 30 VSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKG-------SKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQT-- 100 (152)
T ss_dssp CCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHS-------CHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHH--
T ss_pred CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcC-------CccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhc--
Confidence 45567777777888765 7888988888776532 56 66889999999999999999999999999875
Q ss_pred HhcCCCCchHHHHHHHHHHHH
Q 014710 388 ITHGTNSPFMKELILKLEEAQ 408 (420)
Q Consensus 388 ~~~G~~h~~~~~~~~~l~~~~ 408 (420)
-|+|....+++..+.+..
T Consensus 101 ---eP~n~QA~~Lk~~ie~~~ 118 (152)
T 1pc2_A 101 ---EPQNNQAKELERLIDKAM 118 (152)
T ss_dssp ---CTTCHHHHHHHHHHHHHH
T ss_pred ---CCCCHHHHHHHHHHHHHH
Confidence 578888888777766554
No 205
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=96.66 E-value=0.036 Score=45.96 Aligned_cols=104 Identities=12% Similarity=0.058 Sum_probs=73.4
Q ss_pred HHHhhhhcCCChHHHHHHHHHHHHHhhhhcCC-CChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCC----
Q 014710 277 KKTLALTSCGNHQEVVSTYKMIEKLQKKLYHP-FSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQF---- 351 (420)
Q Consensus 277 ~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~-~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~---- 351 (420)
+....+...+.|+.|+-+...++.....--.. .-..-+++...+++++...|+|.+|..+++++|...+.+.-..
T Consensus 25 dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~ 104 (167)
T 3ffl_A 25 DHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRP 104 (167)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--------
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccc
Confidence 33344555678888888888877765321111 1123567788899999999999999999999999887442111
Q ss_pred -------------ChHHHHHHHHhhHHHHhhcChHHHHHHHH
Q 014710 352 -------------HPLLGLQYYTCGKLEWFLGDTENAIKSMT 380 (420)
Q Consensus 352 -------------hp~~~~~l~~La~~~~~~g~~~eA~~~l~ 380 (420)
-+.=...-|++|..+.+++++++|+..|+
T Consensus 105 ~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le 146 (167)
T 3ffl_A 105 STGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILD 146 (167)
T ss_dssp ------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHh
Confidence 11123577999999999999999887765
No 206
>3dal_A PR domain zinc finger protein 1; methyltransferase, PRDM1, structural genomics, structural genomics consortium, SGC, DNA-binding, metal-binding; 1.65A {Homo sapiens}
Probab=96.51 E-value=0.0014 Score=56.36 Aligned_cols=41 Identities=12% Similarity=0.032 Sum_probs=35.2
Q ss_pred hccccCCCCc---CCceeEEeCCEEEEEEecCCCCCCccCCChH
Q 014710 182 VISIINHSCL---PNAVLVFEGRLAVVRAVQHVPKGAEGQFDDI 222 (420)
Q Consensus 182 ~~s~~NHSC~---PN~~~~f~~~~~~vra~r~I~~Gee~~~~~~ 222 (420)
.+-++||+|. +|+...-.++++.++|+|+|++|||+.+.+-
T Consensus 131 WmRfVn~A~~~~eqNl~a~q~~~~I~y~a~RdI~pGeELlvwYg 174 (196)
T 3dal_A 131 WMRYVNPAHSPREQNLAACQNGMNIYFYTIKPIPANQELLVWYC 174 (196)
T ss_dssp GGGGCEECSSTTTCCEEEEEETTEEEEEESSCBCTTCBCEEEEC
T ss_pred eEEeEEecCCcccCCcEEEEECCEEEEEECcccCCCCEEEEecC
Confidence 5678999997 7988877799999999999999999986543
No 207
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=96.49 E-value=0.014 Score=43.93 Aligned_cols=62 Identities=16% Similarity=0.105 Sum_probs=50.6
Q ss_pred HHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHH
Q 014710 276 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQ 345 (420)
Q Consensus 276 ~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~ 345 (420)
...+..+...|++++|+..+++++.. .|.++ .++..++.+|...|++++|++++++++.+..
T Consensus 11 ~~lg~~~~~~g~~~~A~~~~~~al~~-----~p~~~---~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~ 72 (100)
T 3ma5_A 11 YALAQEHLKHDNASRALALFEELVET-----DPDYV---GTYYHLGKLYERLDRTDDAIDTYAQGIEVAR 72 (100)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH-----STTCT---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHHcCCHHHHHHHHHHHHhhhh
Confidence 44555667789999999999999875 34444 4778899999999999999999999988754
No 208
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=96.45 E-value=0.012 Score=58.03 Aligned_cols=90 Identities=6% Similarity=-0.029 Sum_probs=70.8
Q ss_pred HHHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCC
Q 014710 273 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 352 (420)
Q Consensus 273 ~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~h 352 (420)
......+..+...|++++|+..+++++.+ .|.+ ..++..++.+|..+|++++|+.++++++.+ .
T Consensus 318 ~~~~nla~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~a~~~~g~a~~~~g~~~~A~~~~~~al~l--------~ 381 (457)
T 1kt0_A 318 AAFLNLAMCYLKLREYTKAVECCDKALGL-----DSAN---EKGLYRRGEAQLLMNEFESAKGDFEKVLEV--------N 381 (457)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----STTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHTT--------C
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhc-----CCcc---HHHHHHHHHHHHHccCHHHHHHHHHHHHHh--------C
Confidence 33445666677889999999999999875 3444 567889999999999999999999998875 4
Q ss_pred hHHHHHHHHhhHHHHhhcChHHHHHH
Q 014710 353 PLLGLQYYTCGKLEWFLGDTENAIKS 378 (420)
Q Consensus 353 p~~~~~l~~La~~~~~~g~~~eA~~~ 378 (420)
|.-...+..|+.++..++++++|...
T Consensus 382 P~~~~a~~~l~~~~~~~~~~~~a~~~ 407 (457)
T 1kt0_A 382 PQNKAARLQISMCQKKAKEHNERDRR 407 (457)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55567889999999999999887643
No 209
>3ihx_A PR domain zinc finger protein 10; PRDM10, methyltransferase, structural genomics, structural G consortium, SGC, DNA-binding, metal-binding, nucleus; 2.50A {Homo sapiens}
Probab=96.31 E-value=0.0022 Score=52.95 Aligned_cols=40 Identities=13% Similarity=-0.007 Sum_probs=35.3
Q ss_pred hccccCCCCc---CCceeEEeCCEEEEEEecCCCCCCccCCCh
Q 014710 182 VISIINHSCL---PNAVLVFEGRLAVVRAVQHVPKGAEGQFDD 221 (420)
Q Consensus 182 ~~s~~NHSC~---PN~~~~f~~~~~~vra~r~I~~Gee~~~~~ 221 (420)
.+.++||+|. +|+...-.++++.++|+|+|++|||+.+.+
T Consensus 96 Wmr~vn~a~~~~eqNl~a~q~~~~I~~~~~r~I~pGeELlv~Y 138 (152)
T 3ihx_A 96 WMMFVRPAQNHLEQNLVAYQYGHHVYYTTIKNVEPKQELKVWY 138 (152)
T ss_dssp GGGGCCBCCSTTTCCEEEEECSSSEEEEESSCBCTTCBCCEEE
T ss_pred ceeeeeccCCccCCCcEEEEeCCeEEEEEeeecCCCCEEEEec
Confidence 5678999998 799987778999999999999999988654
No 210
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=96.28 E-value=0.015 Score=53.66 Aligned_cols=83 Identities=11% Similarity=0.036 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHh
Q 014710 289 QEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWF 368 (420)
Q Consensus 289 ~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~ 368 (420)
++|+..+++++.. +.|.+ ..++..++.++...|++++|.+.+++++.+ ++.++.. .+..+|.++..
T Consensus 81 ~~A~~~~~rAl~~----~~p~~---~~~~~~~~~~~~~~~~~~~A~~~~~~al~~-----~p~~~~~--~~~~~~~~~~~ 146 (308)
T 2ond_A 81 DEAANIYERAIST----LLKKN---MLLYFAYADYEESRMKYEKVHSIYNRLLAI-----EDIDPTL--VYIQYMKFARR 146 (308)
T ss_dssp HHHHHHHHHHHTT----TTTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHTS-----SSSCTHH--HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH----hCccc---HHHHHHHHHHHHhcCCHHHHHHHHHHHHhc-----cccCccH--HHHHHHHHHHH
Confidence 7788888777642 23444 346677888888889999999998888763 3444432 67778888888
Q ss_pred hcChHHHHHHHHHHHHH
Q 014710 369 LGDTENAIKSMTEAVEI 385 (420)
Q Consensus 369 ~g~~~eA~~~l~~A~~i 385 (420)
.|++++|+..|++|++.
T Consensus 147 ~~~~~~A~~~~~~a~~~ 163 (308)
T 2ond_A 147 AEGIKSGRMIFKKARED 163 (308)
T ss_dssp HHCHHHHHHHHHHHHTS
T ss_pred hcCHHHHHHHHHHHHhc
Confidence 88888888888888753
No 211
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=96.15 E-value=0.04 Score=50.71 Aligned_cols=94 Identities=10% Similarity=-0.059 Sum_probs=50.4
Q ss_pred CCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHH-------------HH-hcCC
Q 014710 285 CGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVY-------------QR-VYPQ 350 (420)
Q Consensus 285 ~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~-------------~~-~~g~ 350 (420)
.|++++|+..|+++++ +.|.++.. ++..++.++...|++++|...+++++..- +. ..|.
T Consensus 112 ~~~~~~A~~~~~~al~-----~~p~~~~~--~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~a~~~~~~~~~ 184 (308)
T 2ond_A 112 RMKYEKVHSIYNRLLA-----IEDIDPTL--VYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKD 184 (308)
T ss_dssp TTCHHHHHHHHHHHHT-----SSSSCTHH--HHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHHHHTSCC
T ss_pred cCCHHHHHHHHHHHHh-----ccccCccH--HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCC
Confidence 4566666666666654 23443321 44445555555566666655555554310 00 0000
Q ss_pred -------------CChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHH
Q 014710 351 -------------FHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 385 (420)
Q Consensus 351 -------------~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i 385 (420)
.+|.-...+..+|.++..+|++++|+.+|++|+..
T Consensus 185 ~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~ 232 (308)
T 2ond_A 185 KSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTS 232 (308)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 01233455666777777778888888888877764
No 212
>3ray_A PR domain-containing protein 11; structural genomics consortium, SGC, histone methylation, Zn transcriptional regulation, chromatin, transcription; 1.73A {Homo sapiens}
Probab=95.97 E-value=0.0045 Score=54.45 Aligned_cols=41 Identities=12% Similarity=-0.055 Sum_probs=35.3
Q ss_pred hccccCCCCc---CCceeEEeCCEEEEEEecCCCCCCccCCChH
Q 014710 182 VISIINHSCL---PNAVLVFEGRLAVVRAVQHVPKGAEGQFDDI 222 (420)
Q Consensus 182 ~~s~~NHSC~---PN~~~~f~~~~~~vra~r~I~~Gee~~~~~~ 222 (420)
++.++||+|. +|++..-.++++.++|+|+|++|||+.+.+-
T Consensus 140 WmRfVn~Ar~~~EqNL~A~q~~~~Iyy~a~RdI~pGeELlVwYg 183 (237)
T 3ray_A 140 WMRYVVISREEREQNLLAFQHSERIYFRACRDIRPGEWLRVWYS 183 (237)
T ss_dssp GGGGCEECCCTTTCCEEEEEETTEEEEEESSCBCTTCBCEEEEC
T ss_pred ceeEEEcCCCcccccceeEEeCCEEEEEEccccCCCCEEEEeeC
Confidence 5678999996 6988877799999999999999999986543
No 213
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=95.97 E-value=0.031 Score=48.50 Aligned_cols=64 Identities=13% Similarity=-0.031 Sum_probs=38.8
Q ss_pred HHHHHHHHHHH----hhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHh----hcChHHHHHHHHHHHHH
Q 014710 316 TREKLIKILME----LEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWF----LGDTENAIKSMTEAVEI 385 (420)
Q Consensus 316 ~~~~L~~~~~~----~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~----~g~~~eA~~~l~~A~~i 385 (420)
+..+|+.+|.. .+++++|+++++++... ..+......+++||.++.. .+++++|+.++++|.+.
T Consensus 87 a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~------~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~ 158 (212)
T 3rjv_A 87 GEIVLARVLVNRQAGATDVAHAITLLQDAARD------SESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL 158 (212)
T ss_dssp HHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSS------TTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCCccCHHHHHHHHHHHHHc------CCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc
Confidence 34455555554 45566666665555432 1122557777777777777 66777777777777654
No 214
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=95.96 E-value=0.012 Score=55.42 Aligned_cols=96 Identities=8% Similarity=-0.145 Sum_probs=50.9
Q ss_pred HHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCCh
Q 014710 274 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 353 (420)
Q Consensus 274 ~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp 353 (420)
.....+..+...|++++|+..+++++.+ .|.+ ..++..++.+|...|++++|+.++++++.+. |
T Consensus 232 ~~~nla~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~--------p 295 (338)
T 2if4_A 232 CHLNIAACLIKLKRYDEAIGHCNIVLTE-----EEKN---PKALFRRGKAKAELGQMDSARDDFRKAQKYA--------P 295 (338)
T ss_dssp HHHHHHHHHHTTTCCHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHTTTCHHHHHHHHHHTTC-----------
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC--------C
Confidence 4455677778889999999999999875 3444 5678899999999999999999999998763 3
Q ss_pred HHHHHHHHhhHHHH-hhcChHHHHHHHHHHHHH
Q 014710 354 LLGLQYYTCGKLEW-FLGDTENAIKSMTEAVEI 385 (420)
Q Consensus 354 ~~~~~l~~La~~~~-~~g~~~eA~~~l~~A~~i 385 (420)
.-...+..|+.+.. ..+..+++..+|.+++..
T Consensus 296 ~~~~a~~~L~~l~~~~~~~~~~a~~~~~~~l~~ 328 (338)
T 2if4_A 296 DDKAIRRELRALAEQEKALYQKQKEMYKGIFKG 328 (338)
T ss_dssp ---------------------------------
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 33455666777633 456667777788777654
No 215
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=95.83 E-value=0.2 Score=47.96 Aligned_cols=107 Identities=17% Similarity=0.022 Sum_probs=86.0
Q ss_pred HHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHH
Q 014710 277 KKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLG 356 (420)
Q Consensus 277 ~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~ 356 (420)
+.+.-+...|++.+|.+++.++..-..+. .....+++++..-+++|...+++..+..++.++..+...+| .||.+-
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~--dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~--~~p~i~ 179 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKL--DDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIY--CPPKVQ 179 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTS--SCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSC--CCHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhcc--ccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCC--CCHHHH
Confidence 45566778899999999999988766543 34577889999999999999999999999999998888776 667544
Q ss_pred HH-HHHhhHHHH-hhcChHHHHHHHHHHHHHHH
Q 014710 357 LQ-YYTCGKLEW-FLGDTENAIKSMTEAVEILR 387 (420)
Q Consensus 357 ~~-l~~La~~~~-~~g~~~eA~~~l~~A~~i~~ 387 (420)
.. ...-|.+++ ..++|.+|..++-+|..-+.
T Consensus 180 a~i~~~~Gi~~l~~~rdyk~A~~~F~eaf~~f~ 212 (394)
T 3txn_A 180 GALDLQSGILHAADERDFKTAFSYFYEAFEGFD 212 (394)
T ss_dssp HHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhhHHHHHhccCHHHHHHHHHHHHhccc
Confidence 44 444477777 79999999999999976554
No 216
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=95.73 E-value=0.073 Score=46.03 Aligned_cols=65 Identities=14% Similarity=0.008 Sum_probs=42.1
Q ss_pred hHHHHHHHHHHHHHH----hhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHhh-c-----ChHHHHHHHHH
Q 014710 312 NLMQTREKLIKILME----LEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFL-G-----DTENAIKSMTE 381 (420)
Q Consensus 312 ~~~~~~~~L~~~~~~----~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~~-g-----~~~eA~~~l~~ 381 (420)
....+..+|+.+|.. .+++++|+.++++++.. +.++. .+++||.+|... | ++++|+.+|++
T Consensus 123 ~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~------~~~~~---a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~ 193 (212)
T 3rjv_A 123 AAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL------SRTGY---AEYWAGMMFQQGEKGFIEPNKQKALHWLNV 193 (212)
T ss_dssp HHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT------SCTTH---HHHHHHHHHHHCBTTTBCCCHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc------CCCHH---HHHHHHHHHHcCCCCCCCCCHHHHHHHHHH
Confidence 346677777777777 66777777777766421 44443 567777777653 3 67777777777
Q ss_pred HHHH
Q 014710 382 AVEI 385 (420)
Q Consensus 382 A~~i 385 (420)
|.+.
T Consensus 194 A~~~ 197 (212)
T 3rjv_A 194 SCLE 197 (212)
T ss_dssp HHHH
T ss_pred HHHc
Confidence 7654
No 217
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=95.68 E-value=0.23 Score=47.63 Aligned_cols=112 Identities=8% Similarity=0.050 Sum_probs=80.0
Q ss_pred hhcCCChHHHHHHHHHHHHHhhh-hcCCC--Ch-----------hHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHh
Q 014710 282 LTSCGNHQEVVSTYKMIEKLQKK-LYHPF--SV-----------NLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRV 347 (420)
Q Consensus 282 ~~~~g~~~~a~~~~~~~~~~~~~-~l~~~--h~-----------~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~ 347 (420)
....|+.+++...+++++.+++. .|... .. ..+.+...++.++...|++.+|+..+++++..
T Consensus 125 ~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l~~~~~~---- 200 (388)
T 2ff4_A 125 AAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELEALTFE---- 200 (388)
T ss_dssp HHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----
T ss_pred HHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh----
Confidence 33457778888888888887653 23221 11 12234456667777889999999888877544
Q ss_pred cCCCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCC-chHHHHH
Q 014710 348 YPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNS-PFMKELI 401 (420)
Q Consensus 348 ~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h-~~~~~~~ 401 (420)
||.-=..+..|-.++...|+..+|+..|++..+.+...+|-+. |.+..+.
T Consensus 201 ----~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~~L~~eLG~~P~~~l~~l~ 251 (388)
T 2ff4_A 201 ----HPYREPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPGPTLRALN 251 (388)
T ss_dssp ----STTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHH
T ss_pred ----CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHH
Confidence 4555556777778888999999999999999999999999665 3444444
No 218
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=95.55 E-value=0.081 Score=40.36 Aligned_cols=64 Identities=11% Similarity=-0.014 Sum_probs=51.4
Q ss_pred HHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHH
Q 014710 274 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQ 345 (420)
Q Consensus 274 ~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~ 345 (420)
.....+..+...|++++|+..+++++.. .|.+ ..++..++.++...|++++|+.++++++.+..
T Consensus 21 ~~~~lg~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 84 (115)
T 2kat_A 21 LRFTLGKTYAEHEQFDAALPHLRAALDF-----DPTY---SVAWKWLGKTLQGQGDRAGARQAWESGLAAAQ 84 (115)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHH-----CCCc---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcc
Confidence 3344556667789999999999999875 3444 45678899999999999999999999988754
No 219
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=95.40 E-value=0.3 Score=36.79 Aligned_cols=73 Identities=7% Similarity=-0.073 Sum_probs=55.2
Q ss_pred HHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHH
Q 014710 277 KKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL 355 (420)
Q Consensus 277 ~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~ 355 (420)
..+..++.++++..|+..++.++.....-- ........++..|+.++.++|+++.|+.+.++++.. -|.|+..
T Consensus 10 ~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~-~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l-----~P~~~~~ 82 (104)
T 2v5f_A 10 ELGKVAYTEADYYHTELWMEQALRQLDEGE-ISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLEL-----DPEHQRA 82 (104)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHTTC-CCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCHHH
T ss_pred HHHHHHHHccchHHHHHHHHHHHHhhhccC-CCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhc-----CCCCHHH
Confidence 345556778999999999999987653211 013456678899999999999999999999998764 4666554
No 220
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=95.38 E-value=0.12 Score=41.42 Aligned_cols=82 Identities=16% Similarity=0.103 Sum_probs=64.5
Q ss_pred cCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHH----hhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHH
Q 014710 284 SCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILME----LEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQY 359 (420)
Q Consensus 284 ~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~----~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l 359 (420)
..+..++|++.|+++... .+ ..+..+|+.+|.. .+++++|+.+++++.+. .+ ...+
T Consensus 37 ~g~~~~~A~~~~~~Aa~~-------g~---~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~-------g~---~~a~ 96 (138)
T 1klx_A 37 SQINKQKLFQYLSKACEL-------NS---GNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL-------ND---QDGC 96 (138)
T ss_dssp TTSCHHHHHHHHHHHHHT-------TC---HHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT-------TC---HHHH
T ss_pred cCCCHHHHHHHHHHHHcC-------CC---HHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC-------CC---HHHH
Confidence 345567788888877553 22 4667889999988 78999999999998653 23 4578
Q ss_pred HHhhHHHHh----hcChHHHHHHHHHHHHH
Q 014710 360 YTCGKLEWF----LGDTENAIKSMTEAVEI 385 (420)
Q Consensus 360 ~~La~~~~~----~g~~~eA~~~l~~A~~i 385 (420)
++||.+|.. .+++++|+.+|++|.+.
T Consensus 97 ~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~ 126 (138)
T 1klx_A 97 LILGYKQYAGKGVVKNEKQAVKTFEKACRL 126 (138)
T ss_dssp HHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCCCCcCHHHHHHHHHHHHHC
Confidence 999999998 89999999999999774
No 221
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=94.79 E-value=0.3 Score=42.52 Aligned_cols=98 Identities=9% Similarity=-0.035 Sum_probs=71.1
Q ss_pred HHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHH-----hhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHH
Q 014710 292 VSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILME-----LEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLE 366 (420)
Q Consensus 292 ~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~-----~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~ 366 (420)
..++..++.+..+.|=|..-.-.-.+..-++.|.. .|+.+.|.+.++.+.++...-+|+.||.+.....+.+..|
T Consensus 98 ~~iC~dil~lld~~Lip~aEskVFY~KMKGDYyRYlAE~~~g~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFy 177 (227)
T 2o8p_A 98 KAFLQSFEDCVDRLVEKSFFSKFFKLKVKSDISRYKLEFGLCSLEDSKKIHQDAFTLLCEHPDKIEQLPLGFIQNLAYIL 177 (227)
T ss_dssp HHHHHHHHHHHHTCCCCSHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHCGGGGGGSCHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHhccCcHHHHHHHHHHhhhHHHHHHHHccccHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHHHH
Confidence 34555666666666656541222222333343333 3567889999999999999999999999999999998888
Q ss_pred Hh-hcChHHHHHHHHHHHHHHHHh
Q 014710 367 WF-LGDTENAIKSMTEAVEILRIT 389 (420)
Q Consensus 367 ~~-~g~~~eA~~~l~~A~~i~~~~ 389 (420)
.+ +++.++|..+.++|.++.+..
T Consensus 178 YEIln~p~~Ac~lAk~Afd~~~~~ 201 (227)
T 2o8p_A 178 SEKYGEKKQVFNMLNSLGKILELQ 201 (227)
T ss_dssp HHTSSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHccCHHHHHHHHHHHHHHHHHH
Confidence 75 699999999999999986443
No 222
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=94.74 E-value=0.41 Score=47.44 Aligned_cols=53 Identities=13% Similarity=0.046 Sum_probs=35.5
Q ss_pred hcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHH
Q 014710 283 TSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIP 342 (420)
Q Consensus 283 ~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~ 342 (420)
...|++++|+.+|++++.. .|.++. .++..++.++...|++++|.+++++++.
T Consensus 332 ~~~g~~~~A~~~~~~al~~-----~p~~~~--~~~~~~~~~~~~~~~~~~A~~~~~~Al~ 384 (530)
T 2ooe_A 332 ESRMKYEKVHSIYNRLLAI-----EDIDPT--LVYIQYMKFARRAEGIKSGRMIFKKARE 384 (530)
T ss_dssp HHTTCHHHHHHHHHHHHHS-----SSSCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HhcCCHHHHHHHHHHHhCc-----cccCch--HHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 4467888888888888753 344432 3555666666677777777777776654
No 223
>2yqq_A Zinc finger HIT domain-containing protein 3; structure genomics, ZF-HIT domain, TRIP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.59 E-value=0.021 Score=37.89 Aligned_cols=38 Identities=29% Similarity=0.690 Sum_probs=30.8
Q ss_pred CccCccccCCCCCcCCCCCCcccccChhhchhhhhhhHhhchhh
Q 014710 27 ISRCDGCFASSNLKKCSACQVVWYCGSNCQKLDWKLHRLECQVL 70 (420)
Q Consensus 27 ~~~C~~C~~~~~~~~C~~C~~~~yCs~~C~~~~~~~H~~EC~~~ 70 (420)
...|.-|.. .....|++|.. .|||-.|.+ .|+.+|.-.
T Consensus 12 ~~~C~vC~~-~~kY~CPrC~~-~yCSl~C~k----~Hk~~C~~~ 49 (56)
T 2yqq_A 12 TVVCVICLE-KPKYRCPACRV-PYCSVVCFR----KHKEQCNPE 49 (56)
T ss_dssp CCCCTTTCS-CCSEECTTTCC-EESSHHHHH----HHHHHCCCC
T ss_pred CCccCcCcC-CCeeeCCCCCC-CeeCHHHHH----HHHhhCcCC
Confidence 447999999 67899999998 599999985 677668543
No 224
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=94.52 E-value=0.19 Score=45.72 Aligned_cols=86 Identities=12% Similarity=-0.058 Sum_probs=66.4
Q ss_pred HHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHh-----hcHHHHHHHHHHhHHHHHHhcCCCChHH-HHHHHHh
Q 014710 289 QEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMEL-----EDWKEALAYCQLTIPVYQRVYPQFHPLL-GLQYYTC 362 (420)
Q Consensus 289 ~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~-----g~~~~A~~~~~~~l~~~~~~~g~~hp~~-~~~l~~L 362 (420)
.++..++++++++- .++.-..++..|+.+|... |+.++|.++++++|.+ +|.- ....+..
T Consensus 180 ~~A~a~lerAleLD------P~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~L--------nP~~~id~~v~Y 245 (301)
T 3u64_A 180 HAAVMMLERACDLW------PSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRY--------CSAHDPDHHITY 245 (301)
T ss_dssp HHHHHHHHHHHHHC------TTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHH--------CCTTCSHHHHHH
T ss_pred HHHHHHHHHHHHhC------CCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHh--------CCCCCchHHHHH
Confidence 45666677776652 2333455888888889885 9999999999999988 4643 6678888
Q ss_pred hHHHHh-hcChHHHHHHHHHHHHHHHH
Q 014710 363 GKLEWF-LGDTENAIKSMTEAVEILRI 388 (420)
Q Consensus 363 a~~~~~-~g~~~eA~~~l~~A~~i~~~ 388 (420)
|..+.. .|++++|..++++|+++=-.
T Consensus 246 A~~l~~~~gd~~~a~~~L~kAL~a~p~ 272 (301)
T 3u64_A 246 ADALCIPLNNRAGFDEALDRALAIDPE 272 (301)
T ss_dssp HHHTTTTTTCHHHHHHHHHHHHHCCGG
T ss_pred HHHHHHhcCCHHHHHHHHHHHHcCCCC
Confidence 998887 49999999999999885433
No 225
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=94.09 E-value=0.31 Score=53.82 Aligned_cols=64 Identities=11% Similarity=0.096 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHhhcHHHHHHHHHHhHHH----------------------HHHhcCCCChHHHHHHHHhhHHHHhhcChH
Q 014710 316 TREKLIKILMELEDWKEALAYCQLTIPV----------------------YQRVYPQFHPLLGLQYYTCGKLEWFLGDTE 373 (420)
Q Consensus 316 ~~~~L~~~~~~~g~~~~A~~~~~~~l~~----------------------~~~~~g~~hp~~~~~l~~La~~~~~~g~~~ 373 (420)
.+..++..+.+.|+|++|+++++.+... ++.+.. .+.. ..+.++|..+...|+++
T Consensus 1136 ay~eVa~~~~~lGkyEEAIeyL~mArk~~~e~~Idt~LafaYAKl~rleele~fI~--~~n~-ad~~~iGd~le~eg~Ye 1212 (1630)
T 1xi4_A 1136 SYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFIN--GPNN-AHIQQVGDRCYDEKMYD 1212 (1630)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhcccccccHHHHHHHHhhcCHHHHHHHHh--CCCH-HHHHHHHHHHHhcCCHH
Confidence 4455788888889999999988664422 122221 1222 24557888888899999
Q ss_pred HHHHHHHHH
Q 014710 374 NAIKSMTEA 382 (420)
Q Consensus 374 eA~~~l~~A 382 (420)
+|..+|.+|
T Consensus 1213 eA~~~Y~kA 1221 (1630)
T 1xi4_A 1213 AAKLLYNNV 1221 (1630)
T ss_pred HHHHHHHhh
Confidence 999999887
No 226
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=94.01 E-value=0.17 Score=55.88 Aligned_cols=94 Identities=10% Similarity=-0.030 Sum_probs=67.7
Q ss_pred HHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHH---------
Q 014710 276 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQR--------- 346 (420)
Q Consensus 276 ~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~--------- 346 (420)
...+..+...|++++|+..|..+ ..+..++..+.++|++++|++.++++....-.
T Consensus 1199 ~~iGd~le~eg~YeeA~~~Y~kA----------------~ny~rLA~tLvkLge~q~AIEaarKA~n~~aWkev~~acve 1262 (1630)
T 1xi4_A 1199 QQVGDRCYDEKMYDAAKLLYNNV----------------SNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVD 1262 (1630)
T ss_pred HHHHHHHHhcCCHHHHHHHHHhh----------------hHHHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 34566667778888888777764 35677888999999999999999888664221
Q ss_pred --------hcCCCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHH
Q 014710 347 --------VYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 385 (420)
Q Consensus 347 --------~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i 385 (420)
.+|-....-+..+..++..|...|.++||+.++++|+.+
T Consensus 1263 ~~Ef~LA~~cgl~Iiv~~deLeeli~yYe~~G~feEAI~LlE~aL~L 1309 (1630)
T 1xi4_A 1263 GKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGL 1309 (1630)
T ss_pred hhHHHHHHHHHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHhcc
Confidence 112222223345668888898999999999999999653
No 227
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=93.98 E-value=0.55 Score=43.31 Aligned_cols=106 Identities=11% Similarity=0.014 Sum_probs=67.9
Q ss_pred ChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCC--ChHHHHHHHHhhH
Q 014710 287 NHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQF--HPLLGLQYYTCGK 364 (420)
Q Consensus 287 ~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~--hp~~~~~l~~La~ 364 (420)
++.+|...|+++... .|. ......+.+ ++..+|+|++|.+..++++..+-.+-..+ .|.-+..+.++..
T Consensus 193 ~~q~A~~~f~El~~~-----~p~-~~~~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~LaN~i~ 263 (310)
T 3mv2_B 193 TATSNFYYYEELSQT-----FPT-WKTQLGLLN---LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKPTFLANQIT 263 (310)
T ss_dssp TTTHHHHHHHHHHTT-----SCS-HHHHHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHh-----CCC-cccHHHHHH---HHHHcCCHHHHHHHHHHHHHhcccccccccCCCCCHHHHHHHHH
Confidence 778888888886432 122 111222222 79999999999998886665542221110 1333556667777
Q ss_pred HHHhhcChHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHH
Q 014710 365 LEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQ 408 (420)
Q Consensus 365 ~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~~~~~~~l~~~~ 408 (420)
+...+|+ +|..++.++.+ .-|+||.+.++..+=+.-.
T Consensus 264 l~~~lgk--~a~~l~~qL~~-----~~P~hp~i~d~~~k~~~Fd 300 (310)
T 3mv2_B 264 LALMQGL--DTEDLTNQLVK-----LDHEHAFIKHHQEIDAKFD 300 (310)
T ss_dssp HHHHTTC--TTHHHHHHHHH-----TTCCCHHHHHHHHHHHHHH
T ss_pred HHHHhCh--HHHHHHHHHHH-----hCCCChHHHHHHHHHHHHH
Confidence 7777887 88888888765 4599999998876655443
No 228
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=93.97 E-value=0.15 Score=40.86 Aligned_cols=76 Identities=12% Similarity=0.011 Sum_probs=58.7
Q ss_pred ChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHH
Q 014710 287 NHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLE 366 (420)
Q Consensus 287 ~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~ 366 (420)
++++|++.|+++.+. .++.-. |+.+|...+.+++|+++++++.+. .+ ...+++||.++
T Consensus 10 d~~~A~~~~~~aa~~-------g~~~a~-----lg~~y~~g~~~~~A~~~~~~Aa~~-------g~---~~a~~~Lg~~y 67 (138)
T 1klx_A 10 DLKKAIQYYVKACEL-------NEMFGC-----LSLVSNSQINKQKLFQYLSKACEL-------NS---GNGCRFLGDFY 67 (138)
T ss_dssp HHHHHHHHHHHHHHT-------TCTTHH-----HHHHTCTTSCHHHHHHHHHHHHHT-------TC---HHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcC-------CCHhhh-----HHHHHHcCCCHHHHHHHHHHHHcC-------CC---HHHHHHHHHHH
Confidence 456778888777543 233322 788888888888999999988654 23 46889999999
Q ss_pred Hh----hcChHHHHHHHHHHHH
Q 014710 367 WF----LGDTENAIKSMTEAVE 384 (420)
Q Consensus 367 ~~----~g~~~eA~~~l~~A~~ 384 (420)
.. .+++++|+.+|++|.+
T Consensus 68 ~~G~g~~~d~~~A~~~~~~Aa~ 89 (138)
T 1klx_A 68 ENGKYVKKDLRKAAQYYSKACG 89 (138)
T ss_dssp HHCSSSCCCHHHHHHHHHHHHH
T ss_pred HcCCCCCccHHHHHHHHHHHHc
Confidence 98 8999999999999976
No 229
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=93.90 E-value=0.22 Score=49.48 Aligned_cols=86 Identities=12% Similarity=0.052 Sum_probs=61.6
Q ss_pred CCChH-------HHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHH
Q 014710 285 CGNHQ-------EVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGL 357 (420)
Q Consensus 285 ~g~~~-------~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~ 357 (420)
.|+++ +|+..+++++.. +.|. -..++..++.++...|++++|...+++++.+ ++.++. .
T Consensus 292 ~g~~~~a~~~~~~A~~~~~~Al~~----~~p~---~~~l~~~~~~~~~~~g~~~~A~~~~~~al~~-----~p~~~~--~ 357 (530)
T 2ooe_A 292 KGDMNNAKLFSDEAANIYERAIST----LLKK---NMLLYFAYADYEESRMKYEKVHSIYNRLLAI-----EDIDPT--L 357 (530)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHTTT----TCSS---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHS-----SSSCHH--H
T ss_pred ccchhhhhhhhHHHHHHHHHHHHH----hCcc---cHHHHHHHHHHHHhcCCHHHHHHHHHHHhCc-----cccCch--H
Confidence 57776 677777776431 1233 3556778888999999999999999998864 444442 4
Q ss_pred HHHHhhHHHHhhcChHHHHHHHHHHHH
Q 014710 358 QYYTCGKLEWFLGDTENAIKSMTEAVE 384 (420)
Q Consensus 358 ~l~~La~~~~~~g~~~eA~~~l~~A~~ 384 (420)
.+..++.++...|++++|+.++++|++
T Consensus 358 ~~~~~~~~~~~~~~~~~A~~~~~~Al~ 384 (530)
T 2ooe_A 358 VYIQYMKFARRAEGIKSGRMIFKKARE 384 (530)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 667777777777788888888887765
No 230
>1x4s_A Protein FON, zinc finger HIT domain containing protein 2; structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.2
Probab=93.87 E-value=0.018 Score=38.51 Aligned_cols=36 Identities=28% Similarity=0.696 Sum_probs=29.1
Q ss_pred CccCccccC---CCCCcCCCCCCcccccChhhchhhhhhhHhhch
Q 014710 27 ISRCDGCFA---SSNLKKCSACQVVWYCGSNCQKLDWKLHRLECQ 68 (420)
Q Consensus 27 ~~~C~~C~~---~~~~~~C~~C~~~~yCs~~C~~~~~~~H~~EC~ 68 (420)
...|.-|.. ......||+|.. .|||-.|.+ .|+ +|.
T Consensus 11 ~~~C~vC~~~~~~~akY~CPrC~~-rYCSl~C~k----~Hk-~Cs 49 (59)
T 1x4s_A 11 AGPCGFCPAGEVQPARYTCPRCNA-PYCSLRCYR----THG-TCA 49 (59)
T ss_dssp CEEECSSCTTCCEEECEECTTTCC-EESSHHHHH----HHC-CGG
T ss_pred CCcCcCCCCCcCCCccccCcCCCC-CccChHHHH----HHh-HhC
Confidence 468999986 345899999998 599999996 566 784
No 231
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=93.64 E-value=1.4 Score=34.58 Aligned_cols=86 Identities=13% Similarity=0.042 Sum_probs=60.1
Q ss_pred hHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCCh-HHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhc
Q 014710 312 NLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP-LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITH 390 (420)
Q Consensus 312 ~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp-~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~ 390 (420)
...++..++|-++.....-.. -++.+.+++.++...+| ..-..+|.||..+..+|+|++|+.+.+..+++
T Consensus 33 ~s~~~~F~yAw~Lv~S~~~~d----~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~----- 103 (126)
T 1nzn_A 33 VSKSTQFEYAWCLVRTRYNDD----IRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQT----- 103 (126)
T ss_dssp CCHHHHHHHHHHHTTSSSHHH----HHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----
T ss_pred CcHHHHHHHHHHHHcCCCHHH----HHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh-----
Confidence 455666777777776543332 12344445555555557 78889999999999999999999998887764
Q ss_pred CCCCchHHHHHHHHHH
Q 014710 391 GTNSPFMKELILKLEE 406 (420)
Q Consensus 391 G~~h~~~~~~~~~l~~ 406 (420)
-|+++....+...+.+
T Consensus 104 eP~n~QA~~Lk~~i~~ 119 (126)
T 1nzn_A 104 EPQNNQAKELERLIDK 119 (126)
T ss_dssp CTTCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHH
Confidence 5677777766665554
No 232
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=93.62 E-value=0.095 Score=50.92 Aligned_cols=82 Identities=15% Similarity=0.020 Sum_probs=53.2
Q ss_pred HhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHH
Q 014710 279 TLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQ 358 (420)
Q Consensus 279 a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~ 358 (420)
|+.+...|++++|++.++++ ++ ..++..+..++...|+|+.|...+..+ ..||.-
T Consensus 155 A~~L~~Lg~yq~AVea~~KA----------~~---~~~Wk~v~~aCv~~~ef~lA~~~~l~L---------~~~ad~--- 209 (449)
T 1b89_A 155 ASTLVHLGEYQAAVDGARKA----------NS---TRTWKEVCFACVDGKEFRLAQMCGLHI---------VVHADE--- 209 (449)
T ss_dssp HHHHHTTTCHHHHHHHHHHH----------TC---HHHHHHHHHHHHHTTCHHHHHHTTTTT---------TTCHHH---
T ss_pred HHHHHHhccHHHHHHHHHHc----------CC---chhHHHHHHHHHHcCcHHHHHHHHHHH---------HhCHhh---
Confidence 44445566666666666655 11 345566667777777777775544431 134543
Q ss_pred HHHhhHHHHhhcChHHHHHHHHHHHHH
Q 014710 359 YYTCGKLEWFLGDTENAIKSMTEAVEI 385 (420)
Q Consensus 359 l~~La~~~~~~g~~~eA~~~l~~A~~i 385 (420)
+..+..+|..+|++++|+.+|++++.+
T Consensus 210 l~~lv~~Yek~G~~eEai~lLe~aL~l 236 (449)
T 1b89_A 210 LEELINYYQDRGYFEELITMLEAALGL 236 (449)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHhCC
Confidence 446788899999999999999998643
No 233
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=93.56 E-value=0.53 Score=46.14 Aligned_cols=80 Identities=11% Similarity=-0.001 Sum_probs=42.2
Q ss_pred CCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHH----hhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHH
Q 014710 285 CGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILME----LEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYY 360 (420)
Q Consensus 285 ~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~----~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~ 360 (420)
.+++++|+..++++... .+ ..+...|+.+|.. .+++++|+++++++.+. .+ ...++
T Consensus 56 ~~~~~~A~~~~~~a~~~-------~~---~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~-------~~---~~a~~ 115 (490)
T 2xm6_A 56 TKDLTQAMDWFRRAAEQ-------GY---TPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALK-------GL---PQAQQ 115 (490)
T ss_dssp CCCHHHHHHHHHHHHHT-------TC---HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT-------TC---HHHHH
T ss_pred CcCHHHHHHHHHHHHHC-------CC---HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC-------CC---HHHHH
Confidence 56677777777666432 11 2345556666665 56666666666665431 12 13344
Q ss_pred HhhHHHHh----hcChHHHHHHHHHHHH
Q 014710 361 TCGKLEWF----LGDTENAIKSMTEAVE 384 (420)
Q Consensus 361 ~La~~~~~----~g~~~eA~~~l~~A~~ 384 (420)
.||.++.. .+++++|+.+|++|.+
T Consensus 116 ~Lg~~y~~g~g~~~~~~~A~~~~~~a~~ 143 (490)
T 2xm6_A 116 NLGVMYHEGNGVKVDKAESVKWFRLAAE 143 (490)
T ss_dssp HHHHHHHHTSSSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCCCHHHHHHHHHHHHH
Confidence 45555554 4455555555555443
No 234
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=93.52 E-value=0.45 Score=46.67 Aligned_cols=59 Identities=7% Similarity=-0.041 Sum_probs=30.1
Q ss_pred HHHHHHHHHHH----hhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHh----hcChHHHHHHHHHHHH
Q 014710 316 TREKLIKILME----LEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWF----LGDTENAIKSMTEAVE 384 (420)
Q Consensus 316 ~~~~L~~~~~~----~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~----~g~~~eA~~~l~~A~~ 384 (420)
+...|+.+|.. .+++++|+++++++++. .+ ...++.||.++.. .+++++|+.+|++|.+
T Consensus 149 a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~-------~~---~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~ 215 (490)
T 2xm6_A 149 GQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQ-------GN---VWSCNQLGYMYSRGLGVERNDAISAQWYRKSAT 215 (490)
T ss_dssp HHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT-------TC---HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC-------CC---HHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHH
Confidence 34444444444 44555555555544331 11 2345556666655 5666666666666654
No 235
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=93.49 E-value=0.15 Score=42.15 Aligned_cols=48 Identities=8% Similarity=0.063 Sum_probs=37.0
Q ss_pred hHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhh-----------cHHHHHHHHHHhHHH
Q 014710 288 HQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELE-----------DWKEALAYCQLTIPV 343 (420)
Q Consensus 288 ~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g-----------~~~~A~~~~~~~l~~ 343 (420)
+++|+..|++++++ +|....++.+++.+|..+| ++++|++++++++.+
T Consensus 62 ~~eAi~~le~AL~l--------dP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l 120 (158)
T 1zu2_A 62 IQEAITKFEEALLI--------DPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDE 120 (158)
T ss_dssp HHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh--------CcCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHh
Confidence 45777777777765 4445667788999988774 899999999999877
No 236
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=92.36 E-value=0.57 Score=34.63 Aligned_cols=65 Identities=11% Similarity=-0.102 Sum_probs=49.1
Q ss_pred hHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHH
Q 014710 288 HQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKL 365 (420)
Q Consensus 288 ~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~ 365 (420)
.++|..++++++.. +|.-.+++..++..+...|+|++|+.+.++++.. .|. .|.+...-..++.+
T Consensus 25 ~~~A~~~l~~AL~~--------dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~----~p~-~~~~~~i~~~I~~A 89 (93)
T 3bee_A 25 TDEVSLLLEQALQL--------EPYNEAALSLIANDHFISFRFQEAIDTWVLLLDS----NDP-NLDRVTIIESINKA 89 (93)
T ss_dssp CHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTC----CCT-TCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH--------CcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh----CCC-CccHHHHHHHHHHH
Confidence 57899999999874 5555677778899999999999999999988653 344 66666555555443
No 237
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=92.28 E-value=5.8 Score=37.77 Aligned_cols=105 Identities=16% Similarity=0.091 Sum_probs=75.4
Q ss_pred CChHHHHHHHHHHHHHhhhhcCCCChhHHH--HHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhh
Q 014710 286 GNHQEVVSTYKMIEKLQKKLYHPFSVNLMQ--TREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCG 363 (420)
Q Consensus 286 g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~--~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La 363 (420)
+..+..++++..++.-.+. .+-..++ +-..|+.+|...|+|.+|++...+++.-..+. .+.......+..-.
T Consensus 73 ~~~~~~~~~~~~~~~~a~~----~~r~flr~~l~~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~--dd~~~llev~lle~ 146 (394)
T 3txn_A 73 AGTGIEVQLCKDCIEWAKQ----EKRTFLRQSLEARLIALYFDTALYTEALALGAQLLRELKKL--DDKNLLVEVQLLES 146 (394)
T ss_dssp CCHHHHHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTS--SCTHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhcc--ccchhHHHHHHHHH
Confidence 3444445555555443221 1222334 44589999999999999999999998877664 33466667777779
Q ss_pred HHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchHH
Q 014710 364 KLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMK 398 (420)
Q Consensus 364 ~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~~ 398 (420)
+++..++++.++..+|.+|..+....+ -||.+.
T Consensus 147 ~~~~~~~n~~k~k~~l~~a~~~~~ai~--~~p~i~ 179 (394)
T 3txn_A 147 KTYHALSNLPKARAALTSARTTANAIY--CPPKVQ 179 (394)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHSC--CCHHHH
T ss_pred HHHHHhccHHHHHHHHHHHHhhhccCC--CCHHHH
Confidence 999999999999999999999987664 666543
No 238
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=92.02 E-value=1.2 Score=43.04 Aligned_cols=101 Identities=6% Similarity=-0.112 Sum_probs=75.1
Q ss_pred HHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHH-
Q 014710 277 KKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL- 355 (420)
Q Consensus 277 ~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~- 355 (420)
+.|.-+...|++++|.+.+.++.... .++ -..+++...+++++...++|..+..+..++..... ...+|..
T Consensus 136 ~la~~~~~~Gd~~~A~~~~~~~~~~~---~~~--~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~---~~~d~~~~ 207 (429)
T 4b4t_R 136 NLGEYYAQIGDKDNAEKTLGKSLSKA---IST--GAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIE---KGGDWERR 207 (429)
T ss_dssp HHHHHHHHHCCCTTHHHHHHHHHHHH---TCC--CSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHT---TCCCTHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhc---CCh--HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhh---cCCCHHHH
Confidence 45555667799999999998886644 222 45678888899999999999999999999865543 3344443
Q ss_pred HHHHHHhhHHHHhhcChHHHHHHHHHHHHH
Q 014710 356 GLQYYTCGKLEWFLGDTENAIKSMTEAVEI 385 (420)
Q Consensus 356 ~~~l~~La~~~~~~g~~~eA~~~l~~A~~i 385 (420)
+....--|.+++..++|.+|..+|.++...
T Consensus 208 ~~lk~~~gl~~l~~r~f~~Aa~~f~e~~~t 237 (429)
T 4b4t_R 208 NRYKTYYGIHCLAVRNFKEAAKLLVDSLAT 237 (429)
T ss_dssp HHHHHHHHHGGGGTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhChHHHHHHHHHHHhcc
Confidence 444445577888899999999999887653
No 239
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=91.79 E-value=0.52 Score=44.55 Aligned_cols=64 Identities=16% Similarity=0.029 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHH
Q 014710 313 LMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 385 (420)
Q Consensus 313 ~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i 385 (420)
...++..++.++...|++++|+.++++++.+- |. ...+..+|+++...|++++|++.|.+|+.+
T Consensus 276 ~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln--------~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL 339 (372)
T 3ly7_A 276 LSIIYQIKAVSALVKGKTDESYQAINTGIDLE--------MS-WLNYVLLGKVYEMKGMNREAADAYLTAFNL 339 (372)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC--------CC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcC--------CC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 33445556666666799999999999998872 22 456788999999999999999999999885
No 240
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=91.75 E-value=2 Score=34.86 Aligned_cols=87 Identities=11% Similarity=0.157 Sum_probs=58.2
Q ss_pred HHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHh
Q 014710 289 QEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWF 368 (420)
Q Consensus 289 ~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~ 368 (420)
++.++.|+++......--+......+.+.-.-|. +...+|.++|.++++.++.+ |...|..+...|+--..
T Consensus 36 ~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~-~~ei~D~d~aR~vy~~a~~~--------hKkFAKiwi~~AqFEiR 106 (161)
T 4h7y_A 36 NKLIGRYSQAIEALPPDKYGQNESFARIQVRFAE-LKAIQEPDDARDYFQMARAN--------CKKFAFVHISFAQFELS 106 (161)
T ss_dssp HHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHH-HHHHHCGGGCHHHHHHHHHH--------CTTBHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCccccccHHHHHHHHHHHHH-HHHhcCHHHHHHHHHHHHHH--------hHHHHHHHHHHHHHHHH
Confidence 5666777777654211112222223333322332 24558999999999998875 55557777777888788
Q ss_pred hcChHHHHHHHHHHHH
Q 014710 369 LGDTENAIKSMTEAVE 384 (420)
Q Consensus 369 ~g~~~eA~~~l~~A~~ 384 (420)
+|+...|.+.|.+|+.
T Consensus 107 qgnl~kARkILg~AiG 122 (161)
T 4h7y_A 107 QGNVKKSKQLLQKAVE 122 (161)
T ss_dssp TTCHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHhc
Confidence 9999999999999988
No 241
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=91.74 E-value=6.5 Score=34.65 Aligned_cols=77 Identities=10% Similarity=-0.015 Sum_probs=57.4
Q ss_pred HHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHh-hcChHHHHHHHHHHHHHHHHh---cCCCCchHHHHHHHHH
Q 014710 330 WKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWF-LGDTENAIKSMTEAVEILRIT---HGTNSPFMKELILKLE 405 (420)
Q Consensus 330 ~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~-~g~~~eA~~~l~~A~~i~~~~---~G~~h~~~~~~~~~l~ 405 (420)
.+.|.+.++.+.++...-+|+.||.+....++.+..|.+ +++.++|..+.++|.+-.... +++++ +++....|.
T Consensus 147 ~~~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd~Ai~eld~l~ees--ykDstlImq 224 (248)
T 3uzd_A 147 VESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDS--YKDSTLIMQ 224 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTT--HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhcCCccc--hHHHHHHHH
Confidence 356788899999999999999999999999999988887 799999988888877654433 33432 455444444
Q ss_pred HHH
Q 014710 406 EAQ 408 (420)
Q Consensus 406 ~~~ 408 (420)
-+|
T Consensus 225 LLR 227 (248)
T 3uzd_A 225 LLR 227 (248)
T ss_dssp HHH
T ss_pred HHH
Confidence 333
No 242
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=91.47 E-value=0.69 Score=45.03 Aligned_cols=25 Identities=32% Similarity=0.363 Sum_probs=13.0
Q ss_pred HHHHhhHHHHhhc-----ChHHHHHHHHHHH
Q 014710 358 QYYTCGKLEWFLG-----DTENAIKSMTEAV 383 (420)
Q Consensus 358 ~l~~La~~~~~~g-----~~~eA~~~l~~A~ 383 (420)
.+++||.++. .| ++++|+.+|++|.
T Consensus 285 A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa 314 (452)
T 3e4b_A 285 AELLLGKLYY-EGKWVPADAKAAEAHFEKAV 314 (452)
T ss_dssp HHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT
T ss_pred HHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh
Confidence 4455555554 33 5555555555554
No 243
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=91.29 E-value=0.13 Score=50.02 Aligned_cols=54 Identities=9% Similarity=0.029 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHH
Q 014710 316 TREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 385 (420)
Q Consensus 316 ~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i 385 (420)
++..++..+...|.|++|..++.++ ..+..||.++..+|++++|.+.+++|..+
T Consensus 124 a~~~IGd~~~~~g~yeeA~~~Y~~a----------------~n~~~LA~~L~~Lg~yq~AVea~~KA~~~ 177 (449)
T 1b89_A 124 HIQQVGDRCYDEKMYDAAKLLYNNV----------------SNFGRLASTLVHLGEYQAAVDGARKANST 177 (449)
T ss_dssp -------------CTTTHHHHHHHT----------------TCHHHHHHHHHTTTCHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHh----------------hhHHHHHHHHHHhccHHHHHHHHHHcCCc
Confidence 8889999999999999999999876 47889999999999999999999998433
No 244
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=90.60 E-value=5.5 Score=38.63 Aligned_cols=102 Identities=10% Similarity=0.001 Sum_probs=75.2
Q ss_pred hhcCCChHHHHHHHHHHHHHhhhhcCCC-ChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChH-HHHHH
Q 014710 282 LTSCGNHQEVVSTYKMIEKLQKKLYHPF-SVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL-LGLQY 359 (420)
Q Consensus 282 ~~~~g~~~~a~~~~~~~~~~~~~~l~~~-h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~-~~~~l 359 (420)
....|++.+|.+++..+.. ...+.. ....++.+...+++|...+||..|..+..++....... ..+|. .+..+
T Consensus 147 ~e~~g~~~eA~~iL~~l~~---Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~--~~~~~lk~~~~ 221 (445)
T 4b4t_P 147 KKEEGKIDEAADILCELQV---ETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKN--PKYESLKLEYY 221 (445)
T ss_dssp HHHHTCHHHHHHHHHHHHH---HHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHS--SCCHHHHHHHH
T ss_pred HHHccCHHHHHHHHHHHHH---HHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhccc--CCcHHHHHHHH
Confidence 4456899999998888753 223333 34467788888899999999999999998875543333 34454 55666
Q ss_pred HHhhHHHHhhcChHHHHHHHHHHHHHHHH
Q 014710 360 YTCGKLEWFLGDTENAIKSMTEAVEILRI 388 (420)
Q Consensus 360 ~~La~~~~~~g~~~eA~~~l~~A~~i~~~ 388 (420)
..+|.++...++|.+|..+|.++......
T Consensus 222 ~~~~~~~~~e~~y~~a~~~y~e~~~~~~~ 250 (445)
T 4b4t_P 222 NLLVKISLHKREYLEVAQYLQEIYQTDAI 250 (445)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHhcccc
Confidence 67799999999999999999988775544
No 245
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=90.60 E-value=1.2 Score=36.33 Aligned_cols=72 Identities=10% Similarity=-0.041 Sum_probs=51.5
Q ss_pred HHHHHHHhhhhcCC---ChHHHHHHHHHHHHHhhhhcCCCCh-hHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhc
Q 014710 273 NILSKKTLALTSCG---NHQEVVSTYKMIEKLQKKLYHPFSV-NLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVY 348 (420)
Q Consensus 273 ~~l~~~a~~~~~~g---~~~~a~~~~~~~~~~~~~~l~~~h~-~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~ 348 (420)
++.+.-|..+.... ++++++.+++.+++. .+| ..-+.++.|+..+.+.|+|++|++++.++|.+-
T Consensus 33 ~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~-------~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ie---- 101 (152)
T 1pc2_A 33 STQFEYAWCLVRSKYNDDIRKGIVLLEELLPK-------GSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTE---- 101 (152)
T ss_dssp HHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHH-------SCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc-------CCccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhcC----
Confidence 44455566555554 456788888777653 234 456788999999999999999999999998873
Q ss_pred CCCChHHH
Q 014710 349 PQFHPLLG 356 (420)
Q Consensus 349 g~~hp~~~ 356 (420)
|+|+...
T Consensus 102 -P~n~QA~ 108 (152)
T 1pc2_A 102 -PQNNQAK 108 (152)
T ss_dssp -TTCHHHH
T ss_pred -CCCHHHH
Confidence 5555544
No 246
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=90.47 E-value=3.6 Score=33.94 Aligned_cols=95 Identities=14% Similarity=0.043 Sum_probs=65.0
Q ss_pred HHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCCh-HHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCC-----
Q 014710 321 IKILMELEDWKEALAYCQLTIPVYQRVYPQFHP-LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNS----- 394 (420)
Q Consensus 321 ~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp-~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h----- 394 (420)
+..+...|.|+.|.-.+..++.+.+.--....| .....++.+|.+++..|+|..|..+|++|+...+...-...
T Consensus 27 ik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~ 106 (167)
T 3ffl_A 27 VRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPST 106 (167)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC----------
T ss_pred HHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccc
Confidence 345566789999999888877775431111123 45667888899999999999999999999998885431111
Q ss_pred ------------chHHHHHHHHHHHHHHHhccc
Q 014710 395 ------------PFMKELILKLEEAQAEASYKL 415 (420)
Q Consensus 395 ------------~~~~~~~~~l~~~~~~~~~~~ 415 (420)
+.-.++..+++.+..++...+
T Consensus 107 ~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~ 139 (167)
T 3ffl_A 107 GNSASTPQSQCLPSEIEVKYKLAECYTVLKQDK 139 (167)
T ss_dssp ----------CCCCHHHHHHHHHHHHHHTTCHH
T ss_pred cccCCCcccccccchHHHHHHHHHHHHHHCCHH
Confidence 112367788888877665443
No 247
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=90.16 E-value=6.6 Score=34.94 Aligned_cols=94 Identities=13% Similarity=0.073 Sum_probs=65.9
Q ss_pred HHHHHHHHHHhhhhcCCCC--hhHHHHHHHHHHHHHHh-----h-----cHHHHHHHHHHhHHHHHHhc--CCCChHHHH
Q 014710 292 VSTYKMIEKLQKKLYHPFS--VNLMQTREKLIKILMEL-----E-----DWKEALAYCQLTIPVYQRVY--PQFHPLLGL 357 (420)
Q Consensus 292 ~~~~~~~~~~~~~~l~~~h--~~~~~~~~~L~~~~~~~-----g-----~~~~A~~~~~~~l~~~~~~~--g~~hp~~~~ 357 (420)
..++..++.+..+.|=|.. ...+-.+..-++.|..+ | -.+.|.+.++.+.++.+.-+ |+.||.+..
T Consensus 118 ~~iC~diL~llD~~Lip~a~~~skVFY~KMKGDYyRYlAE~~~g~erk~~~e~a~~aYq~A~eiA~~~L~~~pThPiRLG 197 (268)
T 3efz_A 118 LLESEDVIRIIDDNLLMYSEEGARAFCIKLKGDLMRYKAEILKDEEKNQCIKQAVEFYEDALQRERSFLEKYPSDPLYLA 197 (268)
T ss_dssp HHHHHHHHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHCTTGGGCHHHHH
T ss_pred HHHHHHHHHHHHHhhcccCCchhHHHHHhccchHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHHHhcCCCCCChHHHH
Confidence 4455566666555444432 11122223334444432 2 24567888999999998889 999999999
Q ss_pred HHHHhhHHHHh-hcChHHHHHHHHHHHHH
Q 014710 358 QYYTCGKLEWF-LGDTENAIKSMTEAVEI 385 (420)
Q Consensus 358 ~l~~La~~~~~-~g~~~eA~~~l~~A~~i 385 (420)
...+.+..|.+ +++.++|..+.++|.+-
T Consensus 198 LaLNfSVFyYEIln~p~~Ac~lAk~AFde 226 (268)
T 3efz_A 198 TILNYTILKYDLLGNPEGAMKFANRAIQA 226 (268)
T ss_dssp HHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 99999999886 79999999999999887
No 248
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=90.04 E-value=6.2 Score=35.11 Aligned_cols=57 Identities=11% Similarity=0.033 Sum_probs=48.2
Q ss_pred HHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHh-hcChHHHHHHHHHHHHHH
Q 014710 330 WKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWF-LGDTENAIKSMTEAVEIL 386 (420)
Q Consensus 330 ~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~-~g~~~eA~~~l~~A~~i~ 386 (420)
.+.|.+.++.+.++.+.-+|+.||.+....++.+..|.+ +++.++|..+.++|.+-.
T Consensus 151 ~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~A 208 (260)
T 1o9d_A 151 AESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEA 208 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH
Confidence 346788899999999888999999999999999988887 699999888877766544
No 249
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=89.90 E-value=6 Score=31.26 Aligned_cols=82 Identities=16% Similarity=0.024 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHHHh---hcHHHHHHHHHHhHHHHHHhcCCCCh-HHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHH
Q 014710 313 LMQTREKLIKILMEL---EDWKEALAYCQLTIPVYQRVYPQFHP-LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRI 388 (420)
Q Consensus 313 ~~~~~~~L~~~~~~~---g~~~~A~~~~~~~l~~~~~~~g~~hp-~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~ 388 (420)
..++..+.|-.+... .+..+++.++..++. .+| ..-..+|.||..+..+|+|++|+.+....++
T Consensus 39 s~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~--------~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~---- 106 (134)
T 3o48_A 39 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYK--------EAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFE---- 106 (134)
T ss_dssp CHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHH--------HCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHT----
T ss_pred ChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHh--------cCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHh----
Confidence 345666666666654 455566666655443 235 5788999999999999999999999887665
Q ss_pred hcCCCCchHHHHHHHHHHH
Q 014710 389 THGTNSPFMKELILKLEEA 407 (420)
Q Consensus 389 ~~G~~h~~~~~~~~~l~~~ 407 (420)
.-|++.....+...+.+.
T Consensus 107 -~eP~N~QA~~Lk~~Ie~k 124 (134)
T 3o48_A 107 -HERNNKQVGALKSMVEDK 124 (134)
T ss_dssp -TCTTCHHHHHHHHHHHHH
T ss_pred -hCCCCHHHHHHHHHHHHH
Confidence 356677677666665544
No 250
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=89.87 E-value=6.5 Score=31.47 Aligned_cols=83 Identities=14% Similarity=-0.003 Sum_probs=58.9
Q ss_pred hHHHHHHHHHHHHHHh---hcHHHHHHHHHHhHHHHHHhcCCCCh-HHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHH
Q 014710 312 NLMQTREKLIKILMEL---EDWKEALAYCQLTIPVYQRVYPQFHP-LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILR 387 (420)
Q Consensus 312 ~~~~~~~~L~~~~~~~---g~~~~A~~~~~~~l~~~~~~~g~~hp-~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~ 387 (420)
...++..+.|-.+... .+..+++.+++.++.. +| ..-..+|.||..+..+|+|++|+.+.+..+++
T Consensus 37 vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~--------~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~-- 106 (144)
T 1y8m_A 37 ATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKE--------AESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEH-- 106 (144)
T ss_dssp SCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHH--------CCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHT--
T ss_pred CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc--------CccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhc--
Confidence 4556666677666665 4556677766665442 33 57778999999999999999999998887763
Q ss_pred HhcCCCCchHHHHHHHHHHH
Q 014710 388 ITHGTNSPFMKELILKLEEA 407 (420)
Q Consensus 388 ~~~G~~h~~~~~~~~~l~~~ 407 (420)
.|++....++...+.+.
T Consensus 107 ---eP~n~QA~~Lk~~Ie~~ 123 (144)
T 1y8m_A 107 ---ERNNKQVGALKSMVEDK 123 (144)
T ss_dssp ---CCCCHHHHHHHHHHHHH
T ss_pred ---CCCcHHHHHHHHHHHHH
Confidence 56777676666655543
No 251
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=88.81 E-value=2.3 Score=41.20 Aligned_cols=28 Identities=21% Similarity=0.236 Sum_probs=17.3
Q ss_pred HHHHHHhhHH-H--HhhcChHHHHHHHHHHH
Q 014710 356 GLQYYTCGKL-E--WFLGDTENAIKSMTEAV 383 (420)
Q Consensus 356 ~~~l~~La~~-~--~~~g~~~eA~~~l~~A~ 383 (420)
...+++||.+ + ...+++++|+.+|++|.
T Consensus 248 ~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa 278 (452)
T 3e4b_A 248 PASWVSLAQLLYDFPELGDVEQMMKYLDNGR 278 (452)
T ss_dssp THHHHHHHHHHHHSGGGCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCHHHHHHHHHHHH
Confidence 3455666666 3 34666777777777765
No 252
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=88.61 E-value=3.2 Score=38.12 Aligned_cols=54 Identities=7% Similarity=-0.095 Sum_probs=41.6
Q ss_pred hcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHH
Q 014710 283 TSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIP 342 (420)
Q Consensus 283 ~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~ 342 (420)
...|++++|++.+.+.+.. +| +...+.++..+++++...|+.+.|.+..+++..
T Consensus 111 ~~~g~~eeAL~~l~~~i~~-----~~-~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~ 164 (310)
T 3mv2_B 111 AILGDLDKSLETCVEGIDN-----DE-AEGTTELLLLAIEVALLNNNVSTASTIFDNYTN 164 (310)
T ss_dssp HHHTCHHHHHHHHHHHHTS-----SC-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHhcc-----CC-CcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHh
Confidence 3468999999888776431 12 257788888899999999999999998876543
No 253
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=88.43 E-value=12 Score=32.66 Aligned_cols=61 Identities=11% Similarity=0.036 Sum_probs=50.9
Q ss_pred HHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHh-hcChHHHHHHHHHHHHHHHHhc
Q 014710 330 WKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWF-LGDTENAIKSMTEAVEILRITH 390 (420)
Q Consensus 330 ~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~-~g~~~eA~~~l~~A~~i~~~~~ 390 (420)
.+.|.+.++.++++.+.-+|+.||.+.....+.+..|.+ +++.++|..+.++|.+-....+
T Consensus 146 ~e~a~~aY~~A~~iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd~Ai~el 207 (234)
T 2br9_A 146 AENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAEL 207 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTG
T ss_pred HHHHHHHHHHHHHHHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhh
Confidence 346888899999999889999999999999999988887 7999999888888776544443
No 254
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=88.29 E-value=5.4 Score=40.00 Aligned_cols=87 Identities=18% Similarity=0.135 Sum_probs=58.7
Q ss_pred hcCCCh-HHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhc----------HHHHHHHHHHhHHHHHHhcCCC
Q 014710 283 TSCGNH-QEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELED----------WKEALAYCQLTIPVYQRVYPQF 351 (420)
Q Consensus 283 ~~~g~~-~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~----------~~~A~~~~~~~l~~~~~~~g~~ 351 (420)
...|++ ++|++.+.+++.+ .|.++..-..+ +.++...|+ +++|++++.+++..
T Consensus 39 ~~~~~~~eeal~~~~~~l~~-----nP~~~taW~~R---~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~-------- 102 (567)
T 1dce_A 39 RQAGELDESVLELTSQILGA-----NPDFATLWNCR---REVLQHLETEKSPEESAALVKAELGFLESCLRV-------- 102 (567)
T ss_dssp HHTTCCSHHHHHHHHHHHHH-----CTTCHHHHHHH---HHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHH--------
T ss_pred HHcCCCCHHHHHHHHHHHHH-----CchhHHHHHHH---HHHHHhcccccchhhhhhhHHHHHHHHHHHHHh--------
Confidence 334444 5778888888764 45665554444 444445555 88888888888754
Q ss_pred ChHHHHHHHHhhHHHHhhc--ChHHHHHHHHHHHHH
Q 014710 352 HPLLGLQYYTCGKLEWFLG--DTENAIKSMTEAVEI 385 (420)
Q Consensus 352 hp~~~~~l~~La~~~~~~g--~~~eA~~~l~~A~~i 385 (420)
+|.--.+++.-+-++...| ++++|+.++.+|+++
T Consensus 103 ~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~ 138 (567)
T 1dce_A 103 NPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEA 138 (567)
T ss_dssp CTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhh
Confidence 4555556666677777778 668888888888875
No 255
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=88.01 E-value=3.6 Score=29.64 Aligned_cols=59 Identities=20% Similarity=0.145 Sum_probs=42.7
Q ss_pred HHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHh--cCCCCchHHHHHHHHHHHHHHHhc
Q 014710 355 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRIT--HGTNSPFMKELILKLEEAQAEASY 413 (420)
Q Consensus 355 ~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~--~G~~h~~~~~~~~~l~~~~~~~~~ 413 (420)
.|..+.+-|.-.-..|++++|+.+|.+|++.+... +.+|...-..+..++.+....++.
T Consensus 10 ~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~~lk~e~d~~~k~~ir~K~~eY~~RAE~ 70 (83)
T 2v6y_A 10 MARKYAILAVKADKEGKVEDAITYYKKAIEVLSQIIVLYPESVARTAYEQMINEYKKRISY 70 (83)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
Confidence 44455555666678999999999999999988764 567776555567777777554443
No 256
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=87.80 E-value=3.8 Score=40.40 Aligned_cols=88 Identities=8% Similarity=0.026 Sum_probs=65.1
Q ss_pred hcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHh
Q 014710 283 TSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTC 362 (420)
Q Consensus 283 ~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~L 362 (420)
...|++++|.++++..... -+.| -..+++.|...|.+.|++++|.+++.++... +-.|.. .++..|
T Consensus 116 ~~~g~~~~A~~l~~~M~~~---g~~P----d~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~------G~~Pd~-~ty~~L 181 (501)
T 4g26_A 116 VAKDDPEMAFDMVKQMKAF---GIQP----RLRSYGPALFGFCRKGDADKAYEVDAHMVES------EVVPEE-PELAAL 181 (501)
T ss_dssp HHHTCHHHHHHHHHHHHHT---TCCC----CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT------TCCCCH-HHHHHH
T ss_pred HhcCCHHHHHHHHHHHHHc---CCCC----ccceehHHHHHHHHCCCHHHHHHHHHHHHhc------CCCCCH-HHHHHH
Confidence 3458899999998887542 2223 2456788999999999999999998877431 223333 367778
Q ss_pred hHHHHhhcChHHHHHHHHHHHH
Q 014710 363 GKLEWFLGDTENAIKSMTEAVE 384 (420)
Q Consensus 363 a~~~~~~g~~~eA~~~l~~A~~ 384 (420)
-..+...|+.++|..+|++-.+
T Consensus 182 i~~~~~~g~~d~A~~ll~~Mr~ 203 (501)
T 4g26_A 182 LKVSMDTKNADKVYKTLQRLRD 203 (501)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHhhCCCHHHHHHHHHHHHH
Confidence 8888999999999999988543
No 257
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=87.17 E-value=4.2 Score=29.28 Aligned_cols=57 Identities=16% Similarity=0.085 Sum_probs=39.9
Q ss_pred HHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHh--cCCCCchHHHHHHHHHHHHHHHh
Q 014710 356 GLQYYTCGKLEWFLGDTENAIKSMTEAVEILRIT--HGTNSPFMKELILKLEEAQAEAS 412 (420)
Q Consensus 356 ~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~--~G~~h~~~~~~~~~l~~~~~~~~ 412 (420)
|..+..-|.-.-..|++++|..+|.+|++.+... +.+|...-..+..++.+....++
T Consensus 19 Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~alk~e~d~~~k~~ir~K~~eY~~RAE 77 (83)
T 2w2u_A 19 ARKYAINAVKADKEGNAEEAITNYKKAIEVLAQLVSLYRDGSTAAIYEQMINEYKRRIE 77 (83)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSTTSSTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
Confidence 3344444555568899999999999999988764 55666554456677777655444
No 258
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=85.91 E-value=18 Score=32.03 Aligned_cols=77 Identities=13% Similarity=0.074 Sum_probs=57.8
Q ss_pred HHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHh-hcChHHHHHHHHHHHHHHHHh---cCCCCchHHHHHHHHH
Q 014710 330 WKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWF-LGDTENAIKSMTEAVEILRIT---HGTNSPFMKELILKLE 405 (420)
Q Consensus 330 ~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~-~g~~~eA~~~l~~A~~i~~~~---~G~~h~~~~~~~~~l~ 405 (420)
.+.|.+.++.+.++...-+|+.||.+....++.+..|.+ +++.++|..+.++|.+-.... +++++ +++....|.
T Consensus 172 ~e~a~~aY~~A~~iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd~Ai~eLd~L~ees--ykDstlImQ 249 (261)
T 3ubw_A 172 AENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEES--YKDSTLIMQ 249 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTT--HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhccChhh--hHHHHHHHH
Confidence 356788899999999899999999999999999988887 699999988888777654333 44443 555444444
Q ss_pred HHH
Q 014710 406 EAQ 408 (420)
Q Consensus 406 ~~~ 408 (420)
-+|
T Consensus 250 LLR 252 (261)
T 3ubw_A 250 LLR 252 (261)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 259
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=85.91 E-value=18 Score=32.05 Aligned_cols=59 Identities=19% Similarity=0.104 Sum_probs=49.5
Q ss_pred HHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHh-hcChHHHHHHHHHHHHHHHHh
Q 014710 330 WKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWF-LGDTENAIKSMTEAVEILRIT 389 (420)
Q Consensus 330 ~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~-~g~~~eA~~~l~~A~~i~~~~ 389 (420)
.+.|.+.++.++++. .-+|+.||.+....++.+..|.+ +++.++|..+.++|.+-....
T Consensus 172 ~e~a~~aY~~A~~iA-~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~Ai~e 231 (260)
T 2npm_A 172 AEDALKAYKDATVVA-KDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFEMAIEQ 231 (260)
T ss_dssp HHHHHHHHHHHHHHH-TTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHH-HhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence 346788889999988 88999999999999999998887 799999998888887755443
No 260
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=85.89 E-value=17 Score=31.72 Aligned_cols=60 Identities=12% Similarity=0.064 Sum_probs=50.4
Q ss_pred HHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHh-hcChHHHHHHHHHHHHHHHHh
Q 014710 330 WKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWF-LGDTENAIKSMTEAVEILRIT 389 (420)
Q Consensus 330 ~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~-~g~~~eA~~~l~~A~~i~~~~ 389 (420)
.+.|.+.++.+.++...-+|+.||.+.....+.+..|.+ +++.++|..+.++|.+-....
T Consensus 149 ~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd~Ai~e 209 (236)
T 3iqu_A 149 IDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMAD 209 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 456888899999999999999999999999999988875 699999998888887654443
No 261
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=85.30 E-value=1.7 Score=42.84 Aligned_cols=63 Identities=17% Similarity=0.102 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHH
Q 014710 314 MQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVE 384 (420)
Q Consensus 314 ~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~ 384 (420)
.+.+..|+++......+..|..+|.+++.+. |..|..+++||.++...|+.-+|.-+|.+|+.
T Consensus 152 hr~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~--------P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~ 214 (497)
T 1ya0_A 152 QHCLVHLGDIARYRNQTSQAESYYRHAAQLV--------PSNGQPYNQLAILASSKGDHLTTIFYYCRSIA 214 (497)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------TTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHS
T ss_pred HHHHHHcccHHHHHHHHHHHHHHHHHHHHhC--------CCCCchHHHHHHHHhcccccHHHHHHHHHHHh
Confidence 3456678888888888999999999998884 99999999999999999999999999998874
No 262
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=84.87 E-value=8.7 Score=35.67 Aligned_cols=54 Identities=22% Similarity=0.143 Sum_probs=47.5
Q ss_pred HHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHh
Q 014710 333 ALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRIT 389 (420)
Q Consensus 333 A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~ 389 (420)
+++++.+++.+.+++|+..|.. -+--+|.-+.+.+++.||+..+.+|-++....
T Consensus 276 ~l~L~~~AI~sa~~yY~n~HvY---PYtylgGy~yR~~~~reAl~~WA~Aa~Vi~~Y 329 (472)
T 3re2_A 276 AEELFKEAITVAKREYSDHHIY---PYTYLGGYYYRKKKYYEAIASWVDAGYVAGKY 329 (472)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSH---HHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHhccCCcc---chhhhhhhhhhcchHHHHHHHHHHHHHHHHHc
Confidence 7899999999999999999864 66678888889999999999999999887653
No 263
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=84.82 E-value=7.2 Score=30.51 Aligned_cols=41 Identities=17% Similarity=0.079 Sum_probs=32.5
Q ss_pred hhhcCCCCh-hHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHH
Q 014710 303 KKLYHPFSV-NLMQTREKLIKILMELEDWKEALAYCQLTIPV 343 (420)
Q Consensus 303 ~~~l~~~h~-~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~ 343 (420)
+.++...++ ..-..++.||..+.++|+|.+|+.++..+|.+
T Consensus 62 e~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~ 103 (126)
T 1nzn_A 62 EELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQT 103 (126)
T ss_dssp HHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 344544445 45667888999999999999999999998876
No 264
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=84.74 E-value=7.5 Score=35.56 Aligned_cols=100 Identities=12% Similarity=0.073 Sum_probs=60.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcCCCh-HHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhh--cHHHHHHHHHH
Q 014710 263 EEIKKIASEVNILSKKTLALTSCGNH-QEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELE--DWKEALAYCQL 339 (420)
Q Consensus 263 ~~~~~~~~~~~~l~~~a~~~~~~g~~-~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g--~~~~A~~~~~~ 339 (420)
++...+...+.++.+ .|.+ ++|++.+.+++.+ .|.|+..-.. -+.++..+| ++++++++..+
T Consensus 30 ~~y~~~~~~~~a~~~-------~~e~s~~aL~~t~~~L~~-----nP~~~taWn~---R~~~L~~l~~~~~~eeL~~~~~ 94 (306)
T 3dra_A 30 EDYKQIMGLLLALMK-------AEEYSERALHITELGINE-----LASHYTIWIY---RFNILKNLPNRNLYDELDWCEE 94 (306)
T ss_dssp HHHHHHHHHHHHHHH-------TTCCSHHHHHHHHHHHHH-----CTTCHHHHHH---HHHHHHTCTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-------cCCCCHHHHHHHHHHHHH-----CcHHHHHHHH---HHHHHHHcccccHHHHHHHHHH
Confidence 344444544444332 3443 5899999888765 4555554444 455566677 99999999999
Q ss_pred hHHHHHHhcCCCChHHHHHHHHhhHHH----Hhh---cChHHHHHHHHHHHHH
Q 014710 340 TIPVYQRVYPQFHPLLGLQYYTCGKLE----WFL---GDTENAIKSMTEAVEI 385 (420)
Q Consensus 340 ~l~~~~~~~g~~hp~~~~~l~~La~~~----~~~---g~~~eA~~~l~~A~~i 385 (420)
+|..--+.| .+++.-+.++ ... +++++++.++.+++.+
T Consensus 95 ~L~~nPk~y--------~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~ 139 (306)
T 3dra_A 95 IALDNEKNY--------QIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSS 139 (306)
T ss_dssp HHHHCTTCC--------HHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHH
T ss_pred HHHHCcccH--------HHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHh
Confidence 886532222 2222222332 333 6788888888888763
No 265
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=84.68 E-value=17 Score=33.31 Aligned_cols=60 Identities=10% Similarity=0.034 Sum_probs=32.2
Q ss_pred CCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHH
Q 014710 285 CGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQR 346 (420)
Q Consensus 285 ~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~ 346 (420)
.|++-+|-++++.+...+.+- ..+...++++..-+..+.+.|++..|.+++.-+++++++
T Consensus 26 ~G~yYEAhQ~~Rtl~~Ry~~~--~~~~eAidlL~~ga~~ll~~~Q~~sa~DLa~llvev~~~ 85 (312)
T 2wpv_A 26 AGDYYEAHQTLRTIANRYVRS--KSYEHAIELISQGALSFLKAKQGGSGTDLIFYLLEVYDL 85 (312)
T ss_dssp HTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred ccChHHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHH
Confidence 356666666665555443221 233345555555556666666666666655555555443
No 266
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=82.93 E-value=8.1 Score=36.57 Aligned_cols=72 Identities=11% Similarity=0.121 Sum_probs=54.6
Q ss_pred HHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHh-cCCCCc-hHHHHHHHHHHH
Q 014710 333 ALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRIT-HGTNSP-FMKELILKLEEA 407 (420)
Q Consensus 333 A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~-~G~~h~-~~~~~~~~l~~~ 407 (420)
+++++.+++.+.+++|...| .+-|--+|--+...+++.+|+..+.+|-+++... |+.+.. ++++++....+.
T Consensus 283 ~~~Lf~~AI~~ar~~Y~~~h---vYPYtYlgG~~~R~~~~~eAl~~wa~aa~Vi~~YnY~reDeEiYke~~eIanel 356 (489)
T 4gq4_A 283 PLTLYHKGIASAKTYYRDEH---IYPYMYLAGYHCRNRNVREALQAWADTATVIQDYNYCREDEEIYKEFFEVANDV 356 (489)
T ss_dssp HHHHHHHHHHHHHHHSTTCC---SHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCTTCHHHHHHHHHHHHTH
T ss_pred HHHHHHHHHHHHHHhcccCc---ccceeecchHHHHhhhHHHHHHHhhhhhhhhhhcccccchHHHHHHHHHHHHHh
Confidence 67899999999999999988 3466777888888999999999999999887764 554443 344444433333
No 267
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=82.11 E-value=13 Score=35.13 Aligned_cols=54 Identities=11% Similarity=0.141 Sum_probs=47.4
Q ss_pred HHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHh
Q 014710 333 ALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRIT 389 (420)
Q Consensus 333 A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~ 389 (420)
+++++.+++...+++|+..|.. -|.-+|.-+...+++.||+..+.+|-++....
T Consensus 298 ~~~L~~~AI~sa~~~Y~n~HvY---PYtYlgGy~yR~~~~reAl~~WA~Aa~Vi~~Y 351 (550)
T 3u84_A 298 PLTLYHKGIASAKTYYRDEHIY---PYMYLAGYHCRNRNVREALQAWADTATVIQDY 351 (550)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSH---HHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHhccCCcc---ceeecchhhhhcchHHHHHHHHHHHHHHHHHc
Confidence 7889999999999999998864 66778888889999999999999999887654
No 268
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=81.64 E-value=9.7 Score=36.07 Aligned_cols=82 Identities=16% Similarity=0.131 Sum_probs=62.1
Q ss_pred HHHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcC-CC
Q 014710 273 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYP-QF 351 (420)
Q Consensus 273 ~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g-~~ 351 (420)
..+...+......|++.+++..++.++.. +|.+ =.++..|+.++...|+..+|++.|++....+..-+| ..
T Consensus 172 ~a~~~~~~~~l~~g~~~~a~~~l~~~~~~-----~P~~---E~~~~~lm~al~~~Gr~~~Al~~y~~~r~~L~~eLG~~P 243 (388)
T 2ff4_A 172 LAHTAKAEAEIACGRASAVIAELEALTFE-----HPYR---EPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDP 243 (388)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----STTC---HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCC
Confidence 33344555666789999998888777543 3444 446677889999999999999999999999888888 67
Q ss_pred ChHHHHHHHHh
Q 014710 352 HPLLGLQYYTC 362 (420)
Q Consensus 352 hp~~~~~l~~L 362 (420)
.|.+-..+..+
T Consensus 244 ~~~l~~l~~~i 254 (388)
T 2ff4_A 244 GPTLRALNERI 254 (388)
T ss_dssp CHHHHHHHHHH
T ss_pred CHHHHHHHHHH
Confidence 88777655553
No 269
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=81.63 E-value=3.9 Score=42.32 Aligned_cols=92 Identities=13% Similarity=0.040 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHhHHH--HHHhcC-CCChHHHHHHHHh---------hH-HHHhhcChHHHHHHHHH
Q 014710 315 QTREKLIKILMELEDWKEALAYCQLTIPV--YQRVYP-QFHPLLGLQYYTC---------GK-LEWFLGDTENAIKSMTE 381 (420)
Q Consensus 315 ~~~~~L~~~~~~~g~~~~A~~~~~~~l~~--~~~~~g-~~hp~~~~~l~~L---------a~-~~~~~g~~~eA~~~l~~ 381 (420)
..+..|++++.+.|+++.|.+.+.++-+. +..+|- ...+.....+-++ |. +++.+|++++|+++|.+
T Consensus 682 ~~W~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l~~~~~~~~~~~~~~~~a~~~~~~~~A~~~~~~~g~~~~a~~~~~~ 761 (814)
T 3mkq_A 682 MKWRALGDASLQRFNFKLAIEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDAETTGKFNLAFNAYWIAGDIQGAKDLLIK 761 (814)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHcCCHHHHHHHHHHccChhhhHHHHHHcCCHHHHHHHHHHHHHcCchHHHHHHHHHcCCHHHHHHHHHH
Confidence 46688999999999999999998876332 222221 2222222222222 22 45557999999888764
Q ss_pred ------HHHHHHHhcCCCCchHHHHHHHHHHH
Q 014710 382 ------AVEILRITHGTNSPFMKELILKLEEA 407 (420)
Q Consensus 382 ------A~~i~~~~~G~~h~~~~~~~~~l~~~ 407 (420)
|+.+.+ .+|+.+..+.+++.++++-
T Consensus 762 ~~~~~~A~~lA~-~~~~~~~~i~~~~~~~~~~ 792 (814)
T 3mkq_A 762 SQRFSEAAFLGS-TYGLGDNEVNDIVTKWKEN 792 (814)
T ss_dssp TTCHHHHHHHHH-HTTCCHHHHHHHHHHHHHH
T ss_pred cCChHHHHHHHH-HhCCChHHHHHHHHHHHHH
Confidence 555444 4777764466666666544
No 270
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=81.02 E-value=14 Score=32.00 Aligned_cols=63 Identities=10% Similarity=-0.061 Sum_probs=53.4
Q ss_pred hcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHH-hhcHHHHHHHHHHhHHHHH
Q 014710 283 TSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILME-LEDWKEALAYCQLTIPVYQ 345 (420)
Q Consensus 283 ~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~-~g~~~~A~~~~~~~l~~~~ 345 (420)
+..|+.+.+...|+.+..+..+-+.|.||..+.+..+.+..|.. +++.++|..+++++.++.+
T Consensus 136 ~~~g~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~~~ 199 (227)
T 2o8p_A 136 FGLCSLEDSKKIHQDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKILE 199 (227)
T ss_dssp TTSSCHHHHHHHHHHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHH
T ss_pred HccccHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHH
Confidence 34566788999999999998878999999999988888877776 5899999999999988654
No 271
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=79.53 E-value=21 Score=35.07 Aligned_cols=62 Identities=15% Similarity=0.036 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHH
Q 014710 315 QTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAV 383 (420)
Q Consensus 315 ~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~ 383 (420)
.+++.|+..|.+.|++++|.+++.++.. .| ..|. ...+..|=..+...|+.++|..++++-.
T Consensus 106 ~tyn~lI~~~~~~g~~~~A~~l~~~M~~-----~g-~~Pd-~~tyn~lI~~~~~~g~~~~A~~l~~~M~ 167 (501)
T 4g26_A 106 ATFTNGARLAVAKDDPEMAFDMVKQMKA-----FG-IQPR-LRSYGPALFGFCRKGDADKAYEVDAHMV 167 (501)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHH-----TT-CCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHH-----cC-CCCc-cceehHHHHHHHHCCCHHHHHHHHHHHH
Confidence 4677889999999999999998887643 12 1222 3356777778888999999999998754
No 272
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=78.27 E-value=6.6 Score=34.34 Aligned_cols=56 Identities=16% Similarity=0.100 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHH-hhcHHHHHHHHHHhHHHH
Q 014710 289 QEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILME-LEDWKEALAYCQLTIPVY 344 (420)
Q Consensus 289 ~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~-~g~~~~A~~~~~~~l~~~ 344 (420)
+.+.+.|+.+..+...-+.|.||..+.+..+.+..|.. .++.++|..+++++.+-.
T Consensus 150 e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd~A 206 (236)
T 3iqu_A 150 DSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEA 206 (236)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 45677888888887778999999999999888887776 489999999999887644
No 273
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=77.45 E-value=8.3 Score=40.02 Aligned_cols=59 Identities=12% Similarity=0.068 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHhhcChHHHHHHHHHH
Q 014710 316 TREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEA 382 (420)
Q Consensus 316 ~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A 382 (420)
+++.-+..+...|+++.|++.++++.... |.==..++.||++|..+|+++.|+-.|.-+
T Consensus 339 LL~~Qa~FLl~K~~~elAL~~Ak~AV~~a--------PseF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 339 LLNIQTNFLLNRGDYELALGVSNTSTELA--------LDSFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------SSCHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHHhccCcHHHHHHHHHHHHhcC--------chhhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 44555666777899999999999997774 666678999999999999999998776643
No 274
>1lv3_A Hypothetical protein YACG; zinc finger, rubredoxin knuckle, C4 tetrahedral Zn+2, antiparallel beta strand and alpha helix, NESG project; NMR {Escherichia coli} SCOP: g.39.1.9
Probab=77.14 E-value=0.84 Score=31.42 Aligned_cols=13 Identities=31% Similarity=0.772 Sum_probs=10.6
Q ss_pred cccccChhhchhh
Q 014710 47 VVWYCGSNCQKLD 59 (420)
Q Consensus 47 ~~~yCs~~C~~~~ 59 (420)
+..|||+.|+.-|
T Consensus 27 ~rPFCSeRCr~iD 39 (68)
T 1lv3_A 27 FRPFCSKRCQLID 39 (68)
T ss_dssp CCSSSSHHHHHHH
T ss_pred CCcccCHHHHhhh
Confidence 3469999999875
No 275
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=76.99 E-value=7.4 Score=34.05 Aligned_cols=57 Identities=11% Similarity=0.038 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHH-hhcHHHHHHHHHHhHHHHH
Q 014710 289 QEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILME-LEDWKEALAYCQLTIPVYQ 345 (420)
Q Consensus 289 ~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~-~g~~~~A~~~~~~~l~~~~ 345 (420)
+.+.+.|+.+..+...-+.|.||..+.+..+.+..|.. +++.++|..+++++.+-.-
T Consensus 147 e~a~~aY~~A~~iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd~Ai 204 (234)
T 2br9_A 147 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAI 204 (234)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 35677888888887778999999999999888887776 6999999999998877443
No 276
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=76.86 E-value=7.5 Score=34.27 Aligned_cols=58 Identities=9% Similarity=0.009 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHH-hhcHHHHHHHHHHhHHHHHH
Q 014710 289 QEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILME-LEDWKEALAYCQLTIPVYQR 346 (420)
Q Consensus 289 ~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~-~g~~~~A~~~~~~~l~~~~~ 346 (420)
+.+...|+.+..+...-|.|.||..+.+..+.+..|.. +++.++|..+++++.+-.-.
T Consensus 148 ~~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd~Ai~ 206 (248)
T 3uzd_A 148 ESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIA 206 (248)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 35667788888877778999999999999888887776 58999999999998775433
No 277
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=76.49 E-value=15 Score=26.89 Aligned_cols=45 Identities=9% Similarity=0.023 Sum_probs=30.2
Q ss_pred HHHHHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhc-CCCChhHHH
Q 014710 271 EVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLY-HPFSVNLMQ 315 (420)
Q Consensus 271 ~~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l-~~~h~~~~~ 315 (420)
..-.+...|......|++++|+.+|..++......+ ...++..-.
T Consensus 14 ~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~l~~alk~e~~~~~k~ 59 (93)
T 1wfd_A 14 AAVAVLKRAVELDAESRYQQALVCYQEGIDMLLQVLKGTKESSKRC 59 (93)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTCCCHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
Confidence 334455666667778999999999999988765543 233444433
No 278
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=76.16 E-value=27 Score=31.60 Aligned_cols=53 Identities=11% Similarity=0.018 Sum_probs=39.6
Q ss_pred cHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHhh-----cChHHHHHHHHHHHHHHH
Q 014710 329 DWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFL-----GDTENAIKSMTEAVEILR 387 (420)
Q Consensus 329 ~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~~-----g~~~eA~~~l~~A~~i~~ 387 (420)
..+.|..+.++++.+- ..-.-|..+.-||.+|... |+.++|+.+|+||++|--
T Consensus 178 ~l~~A~a~lerAleLD------P~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP 235 (301)
T 3u64_A 178 TVHAAVMMLERACDLW------PSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCS 235 (301)
T ss_dssp HHHHHHHHHHHHHHHC------TTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCC
T ss_pred hHHHHHHHHHHHHHhC------CCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCC
Confidence 4566666667766662 2223577888899999875 999999999999998743
No 279
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=76.12 E-value=14 Score=27.15 Aligned_cols=54 Identities=11% Similarity=-0.059 Sum_probs=36.4
Q ss_pred HHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhc--CCCCchHHHHHHHHHHH
Q 014710 354 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITH--GTNSPFMKELILKLEEA 407 (420)
Q Consensus 354 ~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~--G~~h~~~~~~~~~l~~~ 407 (420)
..|..+.+.|.-.-..|++++|+.+|.+|++.+.... .++...-..+..++.+.
T Consensus 13 ~~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~l~~alk~e~~~~~k~~l~~K~~eY 68 (93)
T 1wfd_A 13 TAAVAVLKRAVELDAESRYQQALVCYQEGIDMLLQVLKGTKESSKRCVLRTKISGY 68 (93)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 3455666667777789999999999999999887754 33433322244454444
No 280
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=75.50 E-value=8.5 Score=34.13 Aligned_cols=57 Identities=11% Similarity=0.038 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHH-hhcHHHHHHHHHHhHHHHH
Q 014710 289 QEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILME-LEDWKEALAYCQLTIPVYQ 345 (420)
Q Consensus 289 ~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~-~g~~~~A~~~~~~~l~~~~ 345 (420)
+.+.+.|+.+..+...-|.|.||..+.+..+.+..|.. +++.++|..+++++.+-.-
T Consensus 173 e~a~~aY~~A~~iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd~Ai 230 (261)
T 3ubw_A 173 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAI 230 (261)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 35677888888887778999999999999888887777 5999999999999877543
No 281
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=75.41 E-value=12 Score=37.56 Aligned_cols=83 Identities=10% Similarity=-0.106 Sum_probs=59.1
Q ss_pred ChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhh-cHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHH
Q 014710 287 NHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELE-DWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKL 365 (420)
Q Consensus 287 ~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g-~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~ 365 (420)
+++++++.+.++++. +|.+++.- ..-+.+....| .++++++++.+++.. +|.-..+++..+.+
T Consensus 124 ~~~~el~~~~k~l~~-----d~~N~~aW---~~R~~~l~~l~~~~~~el~~~~~~I~~--------~p~n~saW~~r~~l 187 (567)
T 1dce_A 124 NWARELELCARFLEA-----DERNFHCW---DYRRFVAAQAAVAPAEELAFTDSLITR--------NFSNYSSWHYRSCL 187 (567)
T ss_dssp CHHHHHHHHHHHHHH-----CTTCHHHH---HHHHHHHHHTCCCHHHHHHHHHTTTTT--------TCCCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhh-----ccccccHH---HHHHHHHHHcCCChHHHHHHHHHHHHH--------CCCCccHHHHHHHH
Confidence 678899999988875 45555443 33444556677 889999998888754 45555677777777
Q ss_pred HHhh--------------cChHHHHHHHHHHHHH
Q 014710 366 EWFL--------------GDTENAIKSMTEAVEI 385 (420)
Q Consensus 366 ~~~~--------------g~~~eA~~~l~~A~~i 385 (420)
+..+ +.+++|++++.+|+.+
T Consensus 188 l~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~~ 221 (567)
T 1dce_A 188 LPQLHPQPDSGPQGRLPENVLLKELELVQNAFFT 221 (567)
T ss_dssp HHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHHH
T ss_pred HHhhcccccccccccccHHHHHHHHHHHHHHHhh
Confidence 6664 5678899999888764
No 282
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=74.96 E-value=19 Score=38.71 Aligned_cols=94 Identities=4% Similarity=-0.164 Sum_probs=61.1
Q ss_pred HhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHH
Q 014710 279 TLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQ 358 (420)
Q Consensus 279 a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~ 358 (420)
.+.+...|+.++|.+++........+...|+ ..+++.|+..|.+.|++++|.+++.++.. .-..++...
T Consensus 134 IdglcK~G~leeA~~Lf~eM~~m~~kG~~Pd----vvTYNtLI~Glck~G~~~eA~~Lf~eM~~---~G~~PDvvT---- 202 (1134)
T 3spa_A 134 FKCCLLTDQLPLAHHLLVVHHGQRQKRKLLT----LDMYNAVMLGWARQGAFKELVYVLFMVKD---AGLTPDLLS---- 202 (1134)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHSHHHHTTCC----HHHHHHHHHHHHHHTCHHHHHHHHHHHHH---TTCCCCHHH----
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHhhcCCCCC----HhHHHHHHHHHHhCCCHHHHHHHHHHHHH---cCCCCcHHH----
Confidence 3445567899999999877655433333333 34788899999999999999999887732 223344333
Q ss_pred HHHhhHHHHhhcCh-HHHHHHHHHHH
Q 014710 359 YYTCGKLEWFLGDT-ENAIKSMTEAV 383 (420)
Q Consensus 359 l~~La~~~~~~g~~-~eA~~~l~~A~ 383 (420)
|..|=..+...|+. ++|..++++..
T Consensus 203 YntLI~glcK~G~~~e~A~~Ll~EM~ 228 (1134)
T 3spa_A 203 YAAALQCMGRQDQDAGTIERCLEQMS 228 (1134)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 33333345556764 67777776543
No 283
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=74.73 E-value=18 Score=34.03 Aligned_cols=34 Identities=12% Similarity=0.241 Sum_probs=28.9
Q ss_pred ChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHH
Q 014710 352 HPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 385 (420)
Q Consensus 352 hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i 385 (420)
.|.-+..+.-+|..++..|++++|+.++++|+++
T Consensus 273 ~~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~L 306 (372)
T 3ly7_A 273 LNNLSIIYQIKAVSALVKGKTDESYQAINTGIDL 306 (372)
T ss_dssp GTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhc
Confidence 3556667778888888889999999999999998
No 284
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=74.39 E-value=50 Score=30.40 Aligned_cols=97 Identities=14% Similarity=0.080 Sum_probs=55.6
Q ss_pred HHHHHhhhhcCCChH-HHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHh-------hcHHHHHHHHHHhHHHHHH
Q 014710 275 LSKKTLALTSCGNHQ-EVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMEL-------EDWKEALAYCQLTIPVYQR 346 (420)
Q Consensus 275 l~~~a~~~~~~g~~~-~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~-------g~~~~A~~~~~~~l~~~~~ 346 (420)
+.+.+......|++. +|+..+..++. +.|.|+..-..+..+....... ..+++++.++..++..
T Consensus 32 ~~~~~~~~~~~~e~s~eaL~~t~~~L~-----~nP~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~--- 103 (331)
T 3dss_A 32 ATQAVFQKRQAGELDESVLELTSQILG-----ANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRV--- 103 (331)
T ss_dssp HHHHHHHHHHTTCCSHHHHHHHHHHHT-----TCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHH-----HCchhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHh---
Confidence 334444444566665 77888887765 4677877766666555544432 1256677766666553
Q ss_pred hcCCCChHHHHHHHHhhHHHHhhc--ChHHHHHHHHHHHH
Q 014710 347 VYPQFHPLLGLQYYTCGKLEWFLG--DTENAIKSMTEAVE 384 (420)
Q Consensus 347 ~~g~~hp~~~~~l~~La~~~~~~g--~~~eA~~~l~~A~~ 384 (420)
+|.--.+++.-+-++..+| .+++++.++.++++
T Consensus 104 -----~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~ 138 (331)
T 3dss_A 104 -----NPKSYGTWHHRCWLLSRLPEPNWARELELCARFLE 138 (331)
T ss_dssp -----CTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHH
T ss_pred -----CCCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHH
Confidence 3333334444444444455 36666666666665
No 285
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=74.30 E-value=9.3 Score=33.95 Aligned_cols=56 Identities=11% Similarity=0.091 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHH-hhcHHHHHHHHHHhHHHH
Q 014710 289 QEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILME-LEDWKEALAYCQLTIPVY 344 (420)
Q Consensus 289 ~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~-~g~~~~A~~~~~~~l~~~ 344 (420)
+.+...|+.+..+...-|.|.||..+.+..+.+..|.. +++.++|..+++++.+-.
T Consensus 152 e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~A 208 (260)
T 1o9d_A 152 ESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEA 208 (260)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH
Confidence 35677888888887777999999999999888887776 599999999999887643
No 286
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=73.84 E-value=56 Score=30.14 Aligned_cols=61 Identities=8% Similarity=0.068 Sum_probs=34.1
Q ss_pred CCCh---HHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHh
Q 014710 285 CGNH---QEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRV 347 (420)
Q Consensus 285 ~g~~---~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~ 347 (420)
.|+| -+|-++++.+...+.+ -.++...++++..-+..+.+.|.+..|.+++.-++++|++.
T Consensus 25 ~G~y~~~YEAHQ~~RTi~~Ry~~--~k~y~eAidLL~~GA~~ll~~~Q~~sg~DL~~llvevy~~~ 88 (336)
T 3lpz_A 25 EGQPEEQYEAAQETRLVAARYSK--QGNWAAAVDILASVSQTLLRSGQGGSGGDLAVLLVDTFRQA 88 (336)
T ss_dssp HCCHHHHHHHHHHHHHHHHHHHH--TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCccccHHHHHHHHHHHHHHh--hcCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHc
Confidence 4666 5666666555544322 13344455666666666666666666666665555555543
No 287
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=73.53 E-value=17 Score=26.04 Aligned_cols=55 Identities=13% Similarity=-0.005 Sum_probs=36.1
Q ss_pred hHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhc--CCCCchHHHHHHHHHHH
Q 014710 353 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITH--GTNSPFMKELILKLEEA 407 (420)
Q Consensus 353 p~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~--G~~h~~~~~~~~~l~~~ 407 (420)
...|..+..-|.-.-..|++++|+.+|.+|++.+.... .++...-..+..+..+.
T Consensus 10 l~~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~l~~a~k~e~~~~~k~~l~~k~~eY 66 (85)
T 2v6x_A 10 LTKGIELVQKAIDLDTATQYEEAYTAYYNGLDYLMLALKYEKNPKSKDLIRAKFTEY 66 (85)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 34555666666666778999999999999999876643 34433223344555444
No 288
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=72.57 E-value=21 Score=28.55 Aligned_cols=78 Identities=12% Similarity=-0.012 Sum_probs=50.2
Q ss_pred ccCHHHHHHHHHHH----------HHHHHHHhhhhcCCC---hHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHH
Q 014710 259 VRSKEEIKKIASEV----------NILSKKTLALTSCGN---HQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILM 325 (420)
Q Consensus 259 ~~~~~~~~~~~~~~----------~~l~~~a~~~~~~g~---~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~ 325 (420)
+++++++..+.++. ++.+.-|..+....+ ..+++.+++.+... +|. ..-+.++-||..+.
T Consensus 16 ~l~~eeL~~lr~qY~~E~~~~vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~-----~~~--~~RdcLYyLAvg~y 88 (144)
T 1y8m_A 16 PLYPQQLEILRQQVVSEGGPTATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKE-----AES--RRRECLYYLTIGCY 88 (144)
T ss_dssp CCCHHHHHHHHHHHHHTTSTTSCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHH-----CCS--THHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc-----Ccc--chhHHHHHHHHHHH
Confidence 45677776665433 333445555444433 23556666666542 222 35567788999999
Q ss_pred HhhcHHHHHHHHHHhHHH
Q 014710 326 ELEDWKEALAYCQLTIPV 343 (420)
Q Consensus 326 ~~g~~~~A~~~~~~~l~~ 343 (420)
++|+|++|+.++..+|.+
T Consensus 89 kl~~Y~~Ar~y~d~lL~~ 106 (144)
T 1y8m_A 89 KLGEYSMAKRYVDTLFEH 106 (144)
T ss_dssp TTTCHHHHHHHHHHHHHT
T ss_pred HhhhHHHHHHHHHHHHhc
Confidence 999999999999988765
No 289
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=72.42 E-value=18 Score=26.02 Aligned_cols=52 Identities=12% Similarity=-0.043 Sum_probs=34.4
Q ss_pred HHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcC-CCCchHHH-HHHHHHHH
Q 014710 356 GLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHG-TNSPFMKE-LILKLEEA 407 (420)
Q Consensus 356 ~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G-~~h~~~~~-~~~~l~~~ 407 (420)
|..+..-|.-.-..|++++|+.+|.+|++.+..... ...|..++ +..+..+.
T Consensus 16 A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ll~alk~e~d~~~k~~lr~K~~eY 69 (86)
T 4a5x_A 16 AATVLKRAVELDSESRYPQALVCYQEGIDLLLQVLKGTKDNTKRCNLREKISKY 69 (86)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHH
Confidence 444445555567889999999999999998876643 33444444 44455444
No 290
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=71.57 E-value=12 Score=33.29 Aligned_cols=55 Identities=13% Similarity=0.127 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHH-hhcHHHHHHHHHHhHHHH
Q 014710 289 QEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILME-LEDWKEALAYCQLTIPVY 344 (420)
Q Consensus 289 ~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~-~g~~~~A~~~~~~~l~~~ 344 (420)
+.+.+.|+.+..+. .-|.|.||..+.+..+.+..|.. +++.++|..+++++.+-.
T Consensus 173 e~a~~aY~~A~~iA-~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~A 228 (260)
T 2npm_A 173 EDALKAYKDATVVA-KDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFEMA 228 (260)
T ss_dssp HHHHHHHHHHHHHH-TTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-HhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 46778899999888 88999999999999888887776 599999999999887643
No 291
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=71.10 E-value=17 Score=35.70 Aligned_cols=74 Identities=11% Similarity=0.083 Sum_probs=58.6
Q ss_pred hcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCC---ChHHHHHHHHhhHHHHhhcChHHHHHHHHH
Q 014710 305 LYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQF---HPLLGLQYYTCGKLEWFLGDTENAIKSMTE 381 (420)
Q Consensus 305 ~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~---hp~~~~~l~~La~~~~~~g~~~eA~~~l~~ 381 (420)
.++-+......+.+.|.+.|...+.++.|..+..++ .+|.. ....+..+|-+|.++..+++|.+|..+|..
T Consensus 222 ~lr~D~~~qa~l~nllLRnYL~~~~y~qA~~lvsk~------~fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~ 295 (523)
T 4b4t_S 222 SLKHDNETKAMLINLILRDFLNNGEVDSASDFISKL------EYPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIA 295 (523)
T ss_dssp CSCSSSCHHHHHHHHHHHHHHHSSCSTTHHHHHHHH------CSCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred hcccCcchhHHHHHHHHHHHHccCcHHHHHHHHhcC------cCCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 344444445566788889999999999998887665 36643 457788999999999999999999999998
Q ss_pred HHH
Q 014710 382 AVE 384 (420)
Q Consensus 382 A~~ 384 (420)
|+.
T Consensus 296 A~r 298 (523)
T 4b4t_S 296 AIR 298 (523)
T ss_dssp HTS
T ss_pred HHH
Confidence 864
No 292
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=69.71 E-value=10 Score=33.73 Aligned_cols=54 Identities=13% Similarity=0.157 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHhhhhc--CCCChhHHHHHHHHHHHHHH-hhcHHHHHHHHHHhHHH
Q 014710 290 EVVSTYKMIEKLQKKLY--HPFSVNLMQTREKLIKILME-LEDWKEALAYCQLTIPV 343 (420)
Q Consensus 290 ~a~~~~~~~~~~~~~~l--~~~h~~~~~~~~~L~~~~~~-~g~~~~A~~~~~~~l~~ 343 (420)
.+.+.|+.+..+...-+ .|.||..+.+..+.+..|.. +++.++|..+++++.+-
T Consensus 170 ~a~~aYq~A~eiA~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde 226 (268)
T 3efz_A 170 QAVEFYEDALQRERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQA 226 (268)
T ss_dssp HHHHHHHHHHHHHHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 55677788877777778 99999999999898888775 58999999999998775
No 293
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=68.39 E-value=29 Score=31.55 Aligned_cols=85 Identities=8% Similarity=-0.038 Sum_probs=59.9
Q ss_pred ChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHH-HHh---hcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHh
Q 014710 287 NHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKIL-MEL---EDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTC 362 (420)
Q Consensus 287 ~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~-~~~---g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~L 362 (420)
+++++++.+..++. .+|.++..-.-+..+..-. ... ++++++++++.+++.. +|.--.+++.-
T Consensus 84 ~~~eeL~~~~~~L~-----~nPk~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~--------~pkny~aW~~R 150 (306)
T 3dra_A 84 NLYDELDWCEEIAL-----DNEKNYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSS--------DPKNHHVWSYR 150 (306)
T ss_dssp CHHHHHHHHHHHHH-----HCTTCCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHH--------CTTCHHHHHHH
T ss_pred cHHHHHHHHHHHHH-----HCcccHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHh--------CCCCHHHHHHH
Confidence 78899999888876 3678877777666555322 334 7899999999998865 34444455555
Q ss_pred hHHHHhhcChH--HHHHHHHHHHH
Q 014710 363 GKLEWFLGDTE--NAIKSMTEAVE 384 (420)
Q Consensus 363 a~~~~~~g~~~--eA~~~l~~A~~ 384 (420)
+-+...+|.++ +++.++.++++
T Consensus 151 ~~vl~~l~~~~~~~EL~~~~~~i~ 174 (306)
T 3dra_A 151 KWLVDTFDLHNDAKELSFVDKVID 174 (306)
T ss_dssp HHHHHHTTCTTCHHHHHHHHHHHH
T ss_pred HHHHHHhcccChHHHHHHHHHHHH
Confidence 56666667777 88888887775
No 294
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=67.99 E-value=31 Score=35.35 Aligned_cols=93 Identities=12% Similarity=-0.046 Sum_probs=62.5
Q ss_pred CCChHHHH-HHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHh-------cCCC-----
Q 014710 285 CGNHQEVV-STYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRV-------YPQF----- 351 (420)
Q Consensus 285 ~g~~~~a~-~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~-------~g~~----- 351 (420)
.|+.++|+ ++|++++.. . |.+ ..++...+...-..|++++|.+.+.+++.....- .|..
T Consensus 356 ~~~~~~a~r~il~rAi~~----~-P~s---~~Lwl~~a~~ee~~~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~ 427 (679)
T 4e6h_A 356 KNTDSTVITKYLKLGQQC----I-PNS---AVLAFSLSEQYELNTKIPEIETTILSCIDRIHLDLAALMEDDPTNESAIN 427 (679)
T ss_dssp HSCCTTHHHHHHHHHHHH----C-TTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHH
T ss_pred cCcHHHHHHHHHHHHHHh----C-CCC---HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhh
Confidence 45666775 888887643 1 333 3345567777788899999999999998864211 1211
Q ss_pred --ChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHH
Q 014710 352 --HPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 385 (420)
Q Consensus 352 --hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i 385 (420)
+......+...+.+....|+.+.|..++.+|++.
T Consensus 428 ~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~ 463 (679)
T 4e6h_A 428 QLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRRL 463 (679)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHT
T ss_pred hhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 1134455666677777788899999999999765
No 295
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=67.18 E-value=32 Score=33.16 Aligned_cols=71 Identities=14% Similarity=-0.033 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCC-CChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHH
Q 014710 313 LMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQ-FHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEIL 386 (420)
Q Consensus 313 ~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~-~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~ 386 (420)
..++...|+.+|...|+|.+|......+. ...+|. +-......+....+++...+++.+|..++.++..-.
T Consensus 136 rarl~~~La~i~e~~g~~~eA~~iL~~l~---~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~ 207 (445)
T 4b4t_P 136 RARVTKDLVEIKKEEGKIDEAADILCELQ---VETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKT 207 (445)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHH---HHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHH---HHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhh
Confidence 56677889999999999999999887764 345663 445566677778999999999999999999986533
No 296
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=66.83 E-value=19 Score=27.70 Aligned_cols=37 Identities=16% Similarity=0.074 Sum_probs=28.5
Q ss_pred HHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhc
Q 014710 354 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITH 390 (420)
Q Consensus 354 ~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~ 390 (420)
..|..+...|.-.-..|++++|+.+|.+|++.+....
T Consensus 16 ~kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie~l~~al 52 (117)
T 2cpt_A 16 QKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVV 52 (117)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHH
Confidence 3445555556566678999999999999999887765
No 297
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=66.61 E-value=20 Score=28.20 Aligned_cols=77 Identities=12% Similarity=-0.008 Sum_probs=50.2
Q ss_pred ccCHHHHHHHHHHH----------HHHHHHHhhhhcCCCh---HHHHHHHHHHHHHhhhhcCCCCh-hHHHHHHHHHHHH
Q 014710 259 VRSKEEIKKIASEV----------NILSKKTLALTSCGNH---QEVVSTYKMIEKLQKKLYHPFSV-NLMQTREKLIKIL 324 (420)
Q Consensus 259 ~~~~~~~~~~~~~~----------~~l~~~a~~~~~~g~~---~~a~~~~~~~~~~~~~~l~~~h~-~~~~~~~~L~~~~ 324 (420)
+++++++..+.++. ++.+.-|..+....+. .+++.+++.+... ++ ..-+.+.-||..+
T Consensus 17 ~~~~eeL~~l~~qy~~E~~~~vs~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~--------~~~~~Rd~LYyLAvg~ 88 (134)
T 3o48_A 17 PLYPQQLEILRQQVVSEGGPTATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKE--------AESRRRECLYYLTIGC 88 (134)
T ss_dssp CCCHHHHHHHHHHHHHTTGGGSCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHH--------CGGGHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhCCCCChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc--------CcchhHHHHHHHHHHH
Confidence 45677776665433 3334455554444332 3556666665442 23 3566778899999
Q ss_pred HHhhcHHHHHHHHHHhHHH
Q 014710 325 MELEDWKEALAYCQLTIPV 343 (420)
Q Consensus 325 ~~~g~~~~A~~~~~~~l~~ 343 (420)
.++|+|++|+.++..+|.+
T Consensus 89 yklgdY~~Ar~y~d~lL~~ 107 (134)
T 3o48_A 89 YKLGEYSMAKRYVDTLFEH 107 (134)
T ss_dssp HHHTCHHHHHHHHHHHHTT
T ss_pred HHhhhHHHHHHHHHHHHhh
Confidence 9999999999999988765
No 298
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=65.67 E-value=35 Score=31.70 Aligned_cols=81 Identities=12% Similarity=0.074 Sum_probs=53.4
Q ss_pred hHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhh-cHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHH
Q 014710 288 HQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELE-DWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLE 366 (420)
Q Consensus 288 ~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g-~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~ 366 (420)
.++|++++.+++.+ .|.|+..-..+ ..++...| +++++++++.++|.. +|.--.+++.-+.++
T Consensus 70 se~AL~lt~~~L~~-----nP~~ytaWn~R---~~iL~~l~~~l~eEL~~~~~~L~~--------nPKny~aW~hR~wlL 133 (349)
T 3q7a_A 70 SERALELTEIIVRM-----NPAHYTVWQYR---FSLLTSLNKSLEDELRLMNEFAVQ--------NLKSYQVWHHRLLLL 133 (349)
T ss_dssp SHHHHHHHHHHHHH-----CTTCHHHHHHH---HHHHHHTTCCHHHHHHHHHHHHHT--------TCCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHh-----CchhHHHHHHH---HHHHHHhhhhHHHHHHHHHHHHHh--------CCCcHHHHHHHHHHH
Confidence 35788988888764 46666554444 44455567 599999998888743 344444555555555
Q ss_pred Hhh-c-ChHHHHHHHHHHHH
Q 014710 367 WFL-G-DTENAIKSMTEAVE 384 (420)
Q Consensus 367 ~~~-g-~~~eA~~~l~~A~~ 384 (420)
..+ + ++++++.++.+++.
T Consensus 134 ~~l~~~~~~~EL~~~~k~L~ 153 (349)
T 3q7a_A 134 DRISPQDPVSEIEYIHGSLL 153 (349)
T ss_dssp HHHCCSCCHHHHHHHHHHTS
T ss_pred HHhcCCChHHHHHHHHHHHH
Confidence 555 5 77788877777664
No 299
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=65.25 E-value=51 Score=29.37 Aligned_cols=52 Identities=19% Similarity=0.045 Sum_probs=37.6
Q ss_pred hhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHH
Q 014710 280 LALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQL 339 (420)
Q Consensus 280 ~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~ 339 (420)
......|+.+++++..+.-++ .+|.=...+..|++++.-.|+|++|.+-++.
T Consensus 5 ~~ll~~g~L~~al~~~~~~VR--------~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~ 56 (273)
T 1zbp_A 5 KNALSEGQLQQALELLIEAIK--------ASPKDASLRSSFIELLCIDGDFERADEQLMQ 56 (273)
T ss_dssp HHHTTTTCHHHHHHHHHHHHH--------TCTTCHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHhCCCHHHHHHHHHHHHH--------hCCcCHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 345667888888877666554 3555567788899999999999998775443
No 300
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=64.28 E-value=34 Score=34.99 Aligned_cols=96 Identities=9% Similarity=0.014 Sum_probs=56.1
Q ss_pred hcCCChHHHHHHHHHHHHHhhhhc------CCCC--------hhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhc
Q 014710 283 TSCGNHQEVVSTYKMIEKLQKKLY------HPFS--------VNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVY 348 (420)
Q Consensus 283 ~~~g~~~~a~~~~~~~~~~~~~~l------~~~h--------~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~ 348 (420)
...|++++|.++|++++.....-+ -|.+ .....++...+......|+.+.|..++.+++.. .
T Consensus 389 e~~~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~----~ 464 (679)
T 4e6h_A 389 ELNTKIPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRRL----K 464 (679)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHT----G
T ss_pred HHhCCHHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----c
Confidence 346889999999999987531100 0221 123335555666667778899998888887654 1
Q ss_pred CCCChHHHHHHHHhhHHHHhhcC-hHHHHHHHHHHHHH
Q 014710 349 PQFHPLLGLQYYTCGKLEWFLGD-TENAIKSMTEAVEI 385 (420)
Q Consensus 349 g~~hp~~~~~l~~La~~~~~~g~-~~eA~~~l~~A~~i 385 (420)
|... ...+...|.+-...++ .+.|.++|+++++.
T Consensus 465 ~~~~---~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~ 499 (679)
T 4e6h_A 465 KLVT---PDIYLENAYIEYHISKDTKTACKVLELGLKY 499 (679)
T ss_dssp GGSC---THHHHHHHHHHHTTTSCCHHHHHHHHHHHHH
T ss_pred CCCC---hHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 2111 1223344555444443 67777777777664
No 301
>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=63.64 E-value=5.3 Score=27.86 Aligned_cols=27 Identities=33% Similarity=0.803 Sum_probs=21.6
Q ss_pred CCCccCccccCCCC--CcCCCCCCcccccCh
Q 014710 25 SSISRCDGCFASSN--LKKCSACQVVWYCGS 53 (420)
Q Consensus 25 ~~~~~C~~C~~~~~--~~~C~~C~~~~yCs~ 53 (420)
.....|+.|-+.+. .+.| .|... ||++
T Consensus 23 ~~~~RC~~C~kkvgL~~f~C-rCg~~-FCs~ 51 (74)
T 1wfp_A 23 STATRCLSCNKKVGVTGFKC-RCGST-FCGT 51 (74)
T ss_dssp CCCCBCSSSCCBCTTTCEEC-TTSCE-ECTT
T ss_pred ccCccchhhcCcccccceEe-ccCCE-eccc
Confidence 35789999999854 5789 89996 9973
No 302
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=62.02 E-value=82 Score=29.62 Aligned_cols=96 Identities=8% Similarity=-0.007 Sum_probs=59.3
Q ss_pred CCChHHHHHHHHHHHHHhhhhc---------CCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHH
Q 014710 285 CGNHQEVVSTYKMIEKLQKKLY---------HPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL 355 (420)
Q Consensus 285 ~g~~~~a~~~~~~~~~~~~~~l---------~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~ 355 (420)
..+.+++++.++.+.....+.. -...-..+.+...++..|...|+.++|..+..++-......-+.+-...
T Consensus 89 ~~d~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~ea~l~i~~~i~~~yl~~~d~~~a~~~l~~~~~~l~~~~~~~~~v~ 168 (393)
T 4b4t_O 89 SKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIARTYLLKNDLVKARDLLDDLEKTLDKKDSIPLRIT 168 (393)
T ss_dssp TTCHHHHHHHHHHHTTTSHHHHSSCCCCCCSSSSCCSHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCCSSSHHH
T ss_pred cCCHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhccCCccHHHH
Confidence 3466777777666533221111 1112335566778899999999999999999888777766544433444
Q ss_pred HHHHHHhhHHHHhhcChHHHHHHHH
Q 014710 356 GLQYYTCGKLEWFLGDTENAIKSMT 380 (420)
Q Consensus 356 ~~~l~~La~~~~~~g~~~eA~~~l~ 380 (420)
+..+.-.+..+...+++.++-...-
T Consensus 169 ~~~y~~~~~~~~~~~~~a~~y~~~l 193 (393)
T 4b4t_O 169 NSFYSTNSQYFKFKNDFNSFYYTSL 193 (393)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 5444445666666677766444333
No 303
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=61.26 E-value=44 Score=27.69 Aligned_cols=99 Identities=13% Similarity=0.006 Sum_probs=59.0
Q ss_pred hcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHh--cC-CCChHHHHHH
Q 014710 283 TSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRV--YP-QFHPLLGLQY 359 (420)
Q Consensus 283 ~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~--~g-~~hp~~~~~l 359 (420)
.+.|+++.|.++.+.+. .-..+..|++.....|+++-|...++++-+.-... |- -........+
T Consensus 16 L~lg~l~~A~e~a~~l~-------------~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~~~L~~Ly~~tg~~e~L~kl 82 (177)
T 3mkq_B 16 LEYGNLDAALDEAKKLN-------------DSITWERLIQEALAQGNASLAEMIYQTQHSFDKLSFLYLVTGDVNKLSKM 82 (177)
T ss_dssp HHTTCHHHHHHHHHHHC-------------CHHHHHHHHHHHHHTTCHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHH
T ss_pred HhcCCHHHHHHHHHHhC-------------CHHHHHHHHHHHHHcCChHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHH
Confidence 44688888887765441 13356788888889999999988888775543321 11 1111111122
Q ss_pred HHh----------hHHHHhhcChHHHHHHHHHHH-----HHHHHhcCCCC
Q 014710 360 YTC----------GKLEWFLGDTENAIKSMTEAV-----EILRITHGTNS 394 (420)
Q Consensus 360 ~~L----------a~~~~~~g~~~eA~~~l~~A~-----~i~~~~~G~~h 394 (420)
-++ -..++.+|++++++++|.++- ..+.++||++.
T Consensus 83 a~iA~~~g~~n~af~~~l~lGdv~~~i~lL~~~~r~~eA~~~A~t~g~~~ 132 (177)
T 3mkq_B 83 QNIAQTREDFGSMLLNTFYNNSTKERSSIFAEGGSLPLAYAVAKANGDEA 132 (177)
T ss_dssp HHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHTTCHH
T ss_pred HHHHHHCccHHHHHHHHHHcCCHHHHHHHHHHCCChHHHHHHHHHcCcHH
Confidence 222 223456799999999887643 24555677643
No 304
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=59.29 E-value=22 Score=34.05 Aligned_cols=70 Identities=11% Similarity=0.047 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHH
Q 014710 314 MQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRI 388 (420)
Q Consensus 314 ~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~ 388 (420)
.++...+|..|...|+++.|.+.+.++.+ ...+..| ....++.+..++...+++..+..++.+|..+...
T Consensus 131 ~~~~~~la~~~~~~Gd~~~A~~~~~~~~~---~~~~~~~--kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~ 200 (429)
T 4b4t_R 131 AQAWINLGEYYAQIGDKDNAEKTLGKSLS---KAISTGA--KIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEK 200 (429)
T ss_dssp SSCCHHHHHHHHHHCCCTTHHHHHHHHHH---HHTCCCS--HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH---hcCChHH--HHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhc
Confidence 44566789999999999999999988643 4555554 5577888888999999999999999999877654
No 305
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=59.03 E-value=2 Score=30.99 Aligned_cols=28 Identities=14% Similarity=0.386 Sum_probs=21.9
Q ss_pred CccccCCCCCCCcccCCCCCccccCCCCCc
Q 014710 230 GYRCKDDGCSGFLLRDSDDKGFTCQQCGLV 259 (420)
Q Consensus 230 ~~~C~c~~C~~~~~~~~~~~~~~C~~C~~~ 259 (420)
.|.| +.|.+.....+....|.|+.|+..
T Consensus 27 ~y~C--p~CG~~~v~r~atGiW~C~~Cg~~ 54 (83)
T 1vq8_Z 27 DHAC--PNCGEDRVDRQGTGIWQCSYCDYK 54 (83)
T ss_dssp CEEC--SSSCCEEEEEEETTEEEETTTCCE
T ss_pred cCcC--CCCCCcceeccCCCeEECCCCCCE
Confidence 4655 699887766666778999999975
No 306
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=59.02 E-value=4.5 Score=25.81 Aligned_cols=27 Identities=26% Similarity=0.599 Sum_probs=20.7
Q ss_pred CCCCCC-CcccCCCCCccccCCCCCccC
Q 014710 235 DDGCSG-FLLRDSDDKGFTCQQCGLVRS 261 (420)
Q Consensus 235 c~~C~~-~~~~~~~~~~~~C~~C~~~~~ 261 (420)
|+.|.+ .+..+.+...+.|..||....
T Consensus 8 CP~C~~~~l~~d~~~gelvC~~CG~v~~ 35 (50)
T 1pft_A 8 CPACESAELIYDPERGEIVCAKCGYVIE 35 (50)
T ss_dssp CTTTSCCCEEEETTTTEEEESSSCCBCC
T ss_pred CcCCCCcceEEcCCCCeEECcccCCccc
Confidence 679987 666666667799999997554
No 307
>2d2s_A Exocyst complex component EXO84; tethering complex, EXO84P, endocytosis/exocytosis complex; 2.85A {Saccharomyces cerevisiae} SCOP: a.118.17.2
Probab=58.96 E-value=90 Score=27.06 Aligned_cols=138 Identities=8% Similarity=-0.048 Sum_probs=75.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCC---CChhHH-------------------------
Q 014710 263 EEIKKIASEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHP---FSVNLM------------------------- 314 (420)
Q Consensus 263 ~~~~~~~~~~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~---~h~~~~------------------------- 314 (420)
+...+..+.+....++.+....+.+|++|+++.+++.+....+-.+ .+....
T Consensus 9 ~~~~~~~~wl~~~~deLDv~IA~r~feeAv~lle~~~~~l~~~~~~~~~~~~~~~~~l~~ki~eR~~~L~~~L~~~l~~~ 88 (235)
T 2d2s_A 9 SSTAQRLKFLDEGVEEIDIELARLRFESAVETLLDIESQLEDLSERISDEELMLLNLISLKIEQRREAISSKLSQSILSS 88 (235)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTC-------CHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred cccchhHHHHHcccHHHHHHHHHHhHHHHHHHHHHHHHHHHhCcccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3344445555666666666666778888888877776665443211 111111
Q ss_pred ---HHHHHHHHHHHHhhcHHHHHHHHHHhHHH--HHHhcC-CCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHH
Q 014710 315 ---QTREKLIKILMELEDWKEALAYCQLTIPV--YQRVYP-QFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRI 388 (420)
Q Consensus 315 ---~~~~~L~~~~~~~g~~~~A~~~~~~~l~~--~~~~~g-~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~ 388 (420)
........++.++|+-++|.+.+.++... -..+.+ ...-..+....+|+.+++ ..+.++...+..
T Consensus 89 ~~~~~~r~~v~~L~rLg~~~~A~~lfL~~rs~~i~~~~r~l~~~gd~~~Yi~~Ls~i~F---------s~I~~t~~~f~~ 159 (235)
T 2d2s_A 89 NEIVHLKSGTENMIKLGLPEQALDLFLQNRSNFIQDLILQIGSVDNPTNYLTQLAVIRF---------QTIKKTVEDFQD 159 (235)
T ss_dssp SSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHCC--CCSHHHHHHHHHHHHH---------HHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCChhHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHH---------HHHHHHHHHHHH
Confidence 11122234455667777777766554442 112211 111233444555555554 557778888888
Q ss_pred hcCCCCchHHHHHHHHHHHHH
Q 014710 389 THGTNSPFMKELILKLEEAQA 409 (420)
Q Consensus 389 ~~G~~h~~~~~~~~~l~~~~~ 409 (420)
.||++.|.+...+..|+.-+.
T Consensus 160 ~F~~~~~~~~S~lV~Wa~~ev 180 (235)
T 2d2s_A 160 IFKELGAKISSILVDWCSDEV 180 (235)
T ss_dssp HSTTCCHHHHHHHHHHHHHHH
T ss_pred HhCCCCcccccHHHHHHHHHH
Confidence 888866666666666665544
No 308
>3o10_A Sacsin; all-helical domain, homodimerization, chaperone; 1.90A {Homo sapiens}
Probab=57.19 E-value=51 Score=26.05 Aligned_cols=39 Identities=5% Similarity=-0.123 Sum_probs=29.5
Q ss_pred cCHHHHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHH
Q 014710 260 RSKEEIKKIASEVNILSKKTLALTSCGNHQEVVSTYKMI 298 (420)
Q Consensus 260 ~~~~~~~~~~~~~~~l~~~a~~~~~~g~~~~a~~~~~~~ 298 (420)
.+.++...+.......++.|......|.++.+.-..+++
T Consensus 4 ~~~ee~~~wl~~A~~dl~~A~~~~~~g~y~~a~F~aqQA 42 (141)
T 3o10_A 4 GNPVEARRWLRQARANFSAARNDLHKNANEWVCFKCYLS 42 (141)
T ss_dssp CCHHHHHHHHHHHHHHHHHHGGGTTTTCHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHhhhhHHhhHHhhCccceEeeehhHH
Confidence 457888888888888888888888889887664444443
No 309
>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=56.50 E-value=7.4 Score=26.32 Aligned_cols=27 Identities=30% Similarity=0.691 Sum_probs=21.3
Q ss_pred CCCccCccccCCCC--CcCCCCCCcccccCh
Q 014710 25 SSISRCDGCFASSN--LKKCSACQVVWYCGS 53 (420)
Q Consensus 25 ~~~~~C~~C~~~~~--~~~C~~C~~~~yCs~ 53 (420)
.....|..|-+.+. .+.| +|... ||++
T Consensus 13 ~~~~rC~~C~kkvgl~~f~C-rCg~~-FC~~ 41 (64)
T 1wfh_A 13 QRPNRCTVCRKRVGLTGFMC-RCGTT-FCGS 41 (64)
T ss_dssp SSCCCCTTTCCCCCTTCEEC-SSSCE-ECTT
T ss_pred CcCCcChhhCCccCccCEEe-ecCCE-eccc
Confidence 34689999999854 5789 79996 9973
No 310
>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=56.50 E-value=7.1 Score=26.43 Aligned_cols=26 Identities=35% Similarity=0.764 Sum_probs=21.1
Q ss_pred CCccCccccCCCC--CcCCCCCCcccccCh
Q 014710 26 SISRCDGCFASSN--LKKCSACQVVWYCGS 53 (420)
Q Consensus 26 ~~~~C~~C~~~~~--~~~C~~C~~~~yCs~ 53 (420)
....|..|-+.+. .+.| .|... ||++
T Consensus 14 ~~~rC~~C~kkvgl~~f~C-rCg~~-FC~~ 41 (64)
T 1wg2_A 14 PNNRCFSCNKKVGVMGFKC-KCGST-FCGS 41 (64)
T ss_dssp CSCSCTTTCCCCTTSCEEC-TTSCE-ECSS
T ss_pred cCCcChhhCCcccccCeEe-ecCCE-eccc
Confidence 4689999999854 5789 89996 9973
No 311
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=54.40 E-value=66 Score=29.55 Aligned_cols=82 Identities=11% Similarity=-0.083 Sum_probs=54.3
Q ss_pred ChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhc-HHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHH
Q 014710 287 NHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELED-WKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKL 365 (420)
Q Consensus 287 ~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~-~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~ 365 (420)
.+++++..+.+++.. +|.|++.-.-+. -+....|. ++++++++.+++.. ||.=-.+++..+.+
T Consensus 125 ~~~~EL~~~~k~l~~-----dprNy~AW~~R~---~vl~~l~~~~~eel~~~~~~I~~--------~p~N~SAW~~R~~l 188 (331)
T 3dss_A 125 NWARELELCARFLEA-----DERNFHCWDYRR---FVAAQAAVAPAEELAFTDSLITR--------NFSNYSSWHYRSCL 188 (331)
T ss_dssp CHHHHHHHHHHHHHH-----CTTCHHHHHHHH---HHHHHTTCCHHHHHHHHHHHHHH--------CSCCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHh-----CCCCHHHHHHHH---HHHHHhCcCHHHHHHHHHHHHHH--------CCCCHHHHHHHHHH
Confidence 467888888888764 566666544443 34445666 68999998888754 44444555666666
Q ss_pred HHhh--------------cChHHHHHHHHHHHH
Q 014710 366 EWFL--------------GDTENAIKSMTEAVE 384 (420)
Q Consensus 366 ~~~~--------------g~~~eA~~~l~~A~~ 384 (420)
+..+ +.+++++.++.+|+.
T Consensus 189 l~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~ 221 (331)
T 3dss_A 189 LPQLHPQPDSGPQGRLPENVLLKELELVQNAFF 221 (331)
T ss_dssp HHHHSCCC------CCCHHHHHHHHHHHHHHHH
T ss_pred HHHhhhccccccccccchHHHHHHHHHHHHHHH
Confidence 5554 457788888888775
No 312
>1gh9_A 8.3 kDa protein (gene MTH1184); beta+alpha complex structure, structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: g.41.6.1
Probab=53.80 E-value=2.5 Score=29.46 Aligned_cols=25 Identities=28% Similarity=0.499 Sum_probs=17.5
Q ss_pred CCCCCCCcccCCCCCccccCCCCCccC
Q 014710 235 DDGCSGFLLRDSDDKGFTCQQCGLVRS 261 (420)
Q Consensus 235 c~~C~~~~~~~~~~~~~~C~~C~~~~~ 261 (420)
|+ |...+........-.|+ ||+...
T Consensus 7 C~-C~~~~~~~~~~kT~~C~-CG~~~~ 31 (71)
T 1gh9_A 7 CD-CGRALYSREGAKTRKCV-CGRTVN 31 (71)
T ss_dssp ET-TSCCEEEETTCSEEEET-TTEEEE
T ss_pred CC-CCCEEEEcCCCcEEECC-CCCeee
Confidence 35 88776655555566898 998655
No 313
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=53.67 E-value=63 Score=34.83 Aligned_cols=71 Identities=10% Similarity=-0.170 Sum_probs=54.7
Q ss_pred CChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHH
Q 014710 309 FSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAV 383 (420)
Q Consensus 309 ~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~ 383 (420)
.......+++.|+..|.+.|++++|.+++..+.....+-. .|.+ .+|..|=..+...|+.++|..++.+-.
T Consensus 122 ~~~~~~~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~---~Pdv-vTYNtLI~Glck~G~~~eA~~Lf~eM~ 192 (1134)
T 3spa_A 122 QLSGQQQRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRK---LLTL-DMYNAVMLGWARQGAFKELVYVLFMVK 192 (1134)
T ss_dssp CCCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHT---TCCH-HHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCC---CCCH-hHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 3445667889999999999999999999877655443333 2333 377788888889999999999998764
No 314
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=52.36 E-value=65 Score=24.58 Aligned_cols=35 Identities=17% Similarity=0.160 Sum_probs=25.6
Q ss_pred HHHHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhc
Q 014710 272 VNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLY 306 (420)
Q Consensus 272 ~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l 306 (420)
...+...|......|++++|+.+|..++..+...+
T Consensus 18 Ai~lv~~Ave~D~ag~y~eAl~lY~~Aie~l~~al 52 (117)
T 2cpt_A 18 AIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVV 52 (117)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHH
Confidence 33445556566667899999999999988766554
No 315
>2l8e_A Polyhomeotic-like protein 1; DNA binding protein; NMR {Homo sapiens}
Probab=51.81 E-value=5.1 Score=25.62 Aligned_cols=30 Identities=17% Similarity=0.422 Sum_probs=19.2
Q ss_pred CccCccccCCCCCcCCCCCCcccccChhhchh
Q 014710 27 ISRCDGCFASSNLKKCSACQVVWYCGSNCQKL 58 (420)
Q Consensus 27 ~~~C~~C~~~~~~~~C~~C~~~~yCs~~C~~~ 58 (420)
..+|.+|.+..+... .=+--.|||..|++.
T Consensus 18 ~~~C~~CG~~i~~~~--~~r~krFCS~sCR~~ 47 (49)
T 2l8e_A 18 LLKCEYCGKYAPAEQ--FRGSKRFCSMTCAKR 47 (49)
T ss_dssp EEECTTTCCEEEGGG--CTTTSSSCSHHHHHH
T ss_pred CCcChhccCcccccc--CCCCCccCCHHHHhh
Confidence 357999988744222 111236999999975
No 316
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=51.14 E-value=24 Score=29.32 Aligned_cols=55 Identities=9% Similarity=0.012 Sum_probs=42.5
Q ss_pred HHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHH
Q 014710 321 IKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRI 388 (420)
Q Consensus 321 ~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~ 388 (420)
+++..+.|+++.|.+.++.+ ..-..+.+||...+..|+++=|+..|+++.+.-..
T Consensus 12 F~LAL~lg~l~~A~e~a~~l-------------~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~~~L 66 (177)
T 3mkq_B 12 FDLALEYGNLDAALDEAKKL-------------NDSITWERLIQEALAQGNASLAEMIYQTQHSFDKL 66 (177)
T ss_dssp HHHHHHTTCHHHHHHHHHHH-------------CCHHHHHHHHHHHHHTTCHHHHHHHHHHTTCHHHH
T ss_pred HHHHHhcCCHHHHHHHHHHh-------------CCHHHHHHHHHHHHHcCChHHHHHHHHHhCCHHHH
Confidence 34567789999999987754 12347889999999999999999999986654333
No 317
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=50.63 E-value=56 Score=22.99 Aligned_cols=34 Identities=9% Similarity=0.047 Sum_probs=27.6
Q ss_pred HHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcC
Q 014710 358 QYYTCGKLEWFLGDTENAIKSMTEAVEILRITHG 391 (420)
Q Consensus 358 ~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G 391 (420)
...++|.=+.-.|+|+.|+.+|+.+++-+.+...
T Consensus 14 e~~k~ARe~Al~GnYdta~~yY~g~~~qI~k~l~ 47 (78)
T 2rpa_A 14 ENVKLAREYALLGNYDSAMVYYQGVLDQMNKYLY 47 (78)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHH
Confidence 3456677777899999999999999998777654
No 318
>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=49.83 E-value=13 Score=25.83 Aligned_cols=30 Identities=20% Similarity=0.453 Sum_probs=21.0
Q ss_pred CccccCCCCCCCcccCCCCCccccCCCCCccC
Q 014710 230 GYRCKDDGCSGFLLRDSDDKGFTCQQCGLVRS 261 (420)
Q Consensus 230 ~~~C~c~~C~~~~~~~~~~~~~~C~~C~~~~~ 261 (420)
.|.| +.|...-........|.|.+|+....
T Consensus 26 ky~C--~fCgk~~vkR~a~GIW~C~~C~~~~A 55 (72)
T 3jyw_9 26 RYDC--SFCGKKTVKRGAAGIWTCSCCKKTVA 55 (72)
T ss_dssp CBCC--SSCCSSCBSBCSSSCBCCSSSCCCCC
T ss_pred CccC--CCCCCceeEecCCCeEECCCCCCEEe
Confidence 4655 68886544445567899999987643
No 319
>1x4w_A Hypothetical protein FLJ13222; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=49.08 E-value=11 Score=25.86 Aligned_cols=26 Identities=35% Similarity=0.723 Sum_probs=21.4
Q ss_pred CCccCccccCCCCC-----cCCCCCCcccccCh
Q 014710 26 SISRCDGCFASSNL-----KKCSACQVVWYCGS 53 (420)
Q Consensus 26 ~~~~C~~C~~~~~~-----~~C~~C~~~~yCs~ 53 (420)
....|..|.+.+.+ ..| .|... ||+.
T Consensus 14 ~~~rC~~C~kk~gL~~~egf~C-rCg~~-FC~~ 44 (67)
T 1x4w_A 14 SRRRCFQCQTKLELVQQELGSC-RCGYV-FCML 44 (67)
T ss_dssp CTTBCSSSCCBCCHHHHHHHCC-SSSCC-CCTT
T ss_pred cCCcchhhCCeecccccCceEe-cCCCE-ehhc
Confidence 46899999999764 589 99996 9973
No 320
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=48.87 E-value=34 Score=27.38 Aligned_cols=45 Identities=11% Similarity=0.009 Sum_probs=34.9
Q ss_pred hHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchHH
Q 014710 353 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMK 398 (420)
Q Consensus 353 p~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~~ 398 (420)
-.+|..+++.|.+|...|+.+.|-.+|-++..++.... |.||.+.
T Consensus 37 lrta~~llr~A~~y~~egd~e~AYily~R~~~L~~e~I-pkHpdy~ 81 (146)
T 2xze_A 37 FRSGVEIIRMASIYSEEGNIEHAFILYNKYITLFIEKL-PKHRDYK 81 (146)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTG-GGSTTTT
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHc-ccCccch
Confidence 34566777889999999999999999999999886433 3466553
No 321
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=48.86 E-value=81 Score=29.67 Aligned_cols=74 Identities=14% Similarity=0.089 Sum_probs=54.5
Q ss_pred HHHHHHhhcHHHHHHHHHHhHHHHHHhcCC---------CChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcC
Q 014710 321 IKILMELEDWKEALAYCQLTIPVYQRVYPQ---------FHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHG 391 (420)
Q Consensus 321 ~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~---------~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G 391 (420)
..+..+..+.++|+++..++.......+.. ..-........++..+...|+.++|..+++++...+...-|
T Consensus 83 ~~~~~~~~d~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~ea~l~i~~~i~~~yl~~~d~~~a~~~l~~~~~~l~~~~~ 162 (393)
T 4b4t_O 83 LASLKDSKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIARTYLLKNDLVKARDLLDDLEKTLDKKDS 162 (393)
T ss_dssp HHHHHHTTCHHHHHHHHHHHTTTSHHHHSSCCCCCCSSSSCCSHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHhhcCCHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhccCC
Confidence 344556678999999988776655554432 12335566677899999999999999999999999888655
Q ss_pred CCC
Q 014710 392 TNS 394 (420)
Q Consensus 392 ~~h 394 (420)
.+.
T Consensus 163 ~~~ 165 (393)
T 4b4t_O 163 IPL 165 (393)
T ss_dssp SSS
T ss_pred ccH
Confidence 543
No 322
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=48.55 E-value=76 Score=23.11 Aligned_cols=39 Identities=21% Similarity=0.064 Sum_probs=31.4
Q ss_pred HHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCC
Q 014710 355 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTN 393 (420)
Q Consensus 355 ~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~ 393 (420)
.|-.+-..|..+...|+|++|++.+++|...+...+--.
T Consensus 14 ~AH~~~RrAe~ll~~gkydeAIech~kAa~yL~eAmklt 52 (97)
T 2crb_A 14 LAHQQSRRADRLLAAGKYEEAISCHRKATTYLSEAMKLT 52 (97)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred hhhHhhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 455566678888899999999999999998887776543
No 323
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=48.29 E-value=63 Score=33.44 Aligned_cols=53 Identities=15% Similarity=0.207 Sum_probs=41.8
Q ss_pred HHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHH
Q 014710 278 KTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQ 338 (420)
Q Consensus 278 ~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~ 338 (420)
+|.=+.++|+++-|+++.+++... -|.-+.++..|+.+|+.+|+|+.|+-..-
T Consensus 343 Qa~FLl~K~~~elAL~~Ak~AV~~--------aPseF~tW~~La~vYi~l~d~e~ALLtLN 395 (754)
T 4gns_B 343 QTNFLLNRGDYELALGVSNTSTEL--------ALDSFESWYNLARCHIKKEEYEKALFAIN 395 (754)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH--------CSSCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHhccCcHHHHHHHHHHHHhc--------CchhhHHHHHHHHHHHHhccHHHHHHHHh
Confidence 444456788999999988888664 34457788999999999999999986543
No 324
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=48.00 E-value=1.6e+02 Score=26.81 Aligned_cols=105 Identities=16% Similarity=0.120 Sum_probs=0.0
Q ss_pred CCCChhHHHHHH-HHHHHHHHhhcHHHHHHHHH-------------HhHHHHHHhcC--CCCh-----------------
Q 014710 307 HPFSVNLMQTRE-KLIKILMELEDWKEALAYCQ-------------LTIPVYQRVYP--QFHP----------------- 353 (420)
Q Consensus 307 ~~~h~~~~~~~~-~L~~~~~~~g~~~~A~~~~~-------------~~l~~~~~~~g--~~hp----------------- 353 (420)
||+.+.-.++++ .++.-+...|+|+.|.++.. ..+++|....- +.-|
T Consensus 20 ~~~~~~~~W~~nS~laadhvAAGsFetAm~lLnrQvGivnf~PLk~~F~~~y~~s~~~l~~~~~~lp~l~~~~~r~~~e~ 99 (325)
T 3mv2_A 20 GPHMETAIWIKNSKLPAVLVAAGAFDAAVQALSKQVGVVKLEPLKKYFTNIYEGCRTYIPSTPCELPAQLGYVRAYDDTV 99 (325)
T ss_dssp -CCHHHHHHHHHCCSHHHHHHTTCHHHHHHHHHHHHCBCCCGGGHHHHHHHHHHTEEEECCSSTTSCCEEEECBSSCSSS
T ss_pred CCCcHHHHHHHcCCcHHHHHHccCHHHHHHHHHHHhCccCchhhHHHHHHHHHHHhhhcccCCCCCCcchhhhcCCcccc
Q ss_pred ------------HHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHH
Q 014710 354 ------------LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEA 411 (420)
Q Consensus 354 ------------~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~~~~~~~l~~~~~~~ 411 (420)
.......+.|.-+...|++++|+..++..+-.+-..--.+.....++...+.-++..+
T Consensus 100 ~~~~~lP~i~~l~~L~~~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icrEYi 169 (325)
T 3mv2_A 100 SEDQILPYVPGLDVVNEKMNEGYKNFKLNKPDIAIECFREAIYRITLLMVDDAEDEKLAHKILETAREYI 169 (325)
T ss_dssp CGGGCCBCCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCCBCSSHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCCCCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhheeeeccHHHHHHHHHHHHHHHHHH
No 325
>1vh6_A Flagellar protein FLIS; structural genomics, unknown function; HET: MSE; 2.50A {Bacillus subtilis} SCOP: a.24.19.1
Probab=47.87 E-value=84 Score=24.99 Aligned_cols=88 Identities=6% Similarity=0.015 Sum_probs=49.1
Q ss_pred CHHHHHH-HHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHH-------------
Q 014710 261 SKEEIKK-IASEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILME------------- 326 (420)
Q Consensus 261 ~~~~~~~-~~~~~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~------------- 326 (420)
++.++.. +.+.+-..++.|.....+|++++.-....++..+...+...-+.. ..+..+|..+|..
T Consensus 21 sP~~Li~mLydgal~~l~~A~~aie~~d~~~k~~~i~KA~~Ii~eL~~sLd~e-geiA~nL~~LY~y~~~~L~~Ani~~D 99 (145)
T 1vh6_A 21 TPGELTLMLYNGCLKFIRLAAQAIENDDMERKNENLIKAQNIIQELNFTLNRN-IELSASMGAMYDYMYRRLVQANIKND 99 (145)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHTTHHHHHHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHcCCc-hHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 3445443 346666666777777888888776655555544432221111222 3333344443332
Q ss_pred hhcHHHHHHHHHHhHHHHHHhcC
Q 014710 327 LEDWKEALAYCQLTIPVYQRVYP 349 (420)
Q Consensus 327 ~g~~~~A~~~~~~~l~~~~~~~g 349 (420)
...++++..+...+.+.|+.+..
T Consensus 100 ~~~ldev~~ll~~LreaW~~i~~ 122 (145)
T 1vh6_A 100 TGMLAEVEGYVTDFRDAWKQAIQ 122 (145)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 24677788888888888877654
No 326
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=47.12 E-value=93 Score=23.71 Aligned_cols=22 Identities=23% Similarity=0.182 Sum_probs=11.8
Q ss_pred hhcChHHHHHHHHHHHHHHHHh
Q 014710 368 FLGDTENAIKSMTEAVEILRIT 389 (420)
Q Consensus 368 ~~g~~~eA~~~l~~A~~i~~~~ 389 (420)
+.|+.++|+.+|++.+.-+..-
T Consensus 34 E~g~k~~Al~lYk~GI~eLe~G 55 (116)
T 2dl1_A 34 ELGQKEEAKNYYKQGIGHLLRG 55 (116)
T ss_dssp HHTCHHHHHHHHHHHHHHHHHH
T ss_pred hcCCHHHHHHHHHHHHHHHHHh
Confidence 3455555555555555544444
No 327
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=44.45 E-value=1.2e+02 Score=24.59 Aligned_cols=65 Identities=11% Similarity=0.072 Sum_probs=42.9
Q ss_pred HHHHHhhcHHHHHHHHHHhHHHHHHhcCCC----ChHHHHHH-HHhhHHHHhhcChHHHHHHHHHHHHHHHHhc
Q 014710 322 KILMELEDWKEALAYCQLTIPVYQRVYPQF----HPLLGLQY-YTCGKLEWFLGDTENAIKSMTEAVEILRITH 390 (420)
Q Consensus 322 ~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~----hp~~~~~l-~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~ 390 (420)
..+.+.|+|-+|-+.++.+ + +..+.. ....|.+. .-.|..++..||...|..++.+|+..+...-
T Consensus 40 i~lFn~g~yfeaHEvLEe~---W-~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~~L~~~~ 109 (161)
T 2ijq_A 40 VRLYNSGEFHESHDCFEDE---W-YNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQYFRGVP 109 (161)
T ss_dssp HHHHHTTCHHHHHHHHHHH---T-TTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTTSC
T ss_pred HHHHhCCCchHHHHHHHHH---H-HhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCC
Confidence 3455558988886655443 2 222222 22444444 4555666678999999999999999998764
No 328
>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=43.93 E-value=17 Score=26.05 Aligned_cols=27 Identities=22% Similarity=0.550 Sum_probs=21.2
Q ss_pred CCCccCccccCCCC---CcCCCCCCcccccCh
Q 014710 25 SSISRCDGCFASSN---LKKCSACQVVWYCGS 53 (420)
Q Consensus 25 ~~~~~C~~C~~~~~---~~~C~~C~~~~yCs~ 53 (420)
.....|+.|.+.+. .+.|. |... ||++
T Consensus 23 ~~~~rC~~C~kkvgl~~~f~Cr-Cg~~-FC~~ 52 (85)
T 1wff_A 23 KIMKHCFLCGKKTGLATSFECR-CGNN-FCAS 52 (85)
T ss_dssp CCCCBCSSSCCBCSSSSCEECT-TCCE-ECTT
T ss_pred ccCccchhhCCeecccCCeEcC-CCCE-eccc
Confidence 34689999999854 57895 9996 9974
No 329
>3j20_Y 30S ribosomal protein S27AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=42.79 E-value=8.5 Score=24.67 Aligned_cols=25 Identities=16% Similarity=0.491 Sum_probs=16.4
Q ss_pred CCCCCCCcccCCCCCccccCCCCCc
Q 014710 235 DDGCSGFLLRDSDDKGFTCQQCGLV 259 (420)
Q Consensus 235 c~~C~~~~~~~~~~~~~~C~~C~~~ 259 (420)
|++|...+...+..+.+.|.+||.+
T Consensus 22 CP~CG~~~fm~~~~~R~~C~kCG~t 46 (50)
T 3j20_Y 22 CPRCGPGVFMADHGDRWACGKCGYT 46 (50)
T ss_dssp CSSSCSSCEEEECSSEEECSSSCCE
T ss_pred CCCCCCceEEecCCCeEECCCCCCE
Confidence 5789764333333467899999853
No 330
>3j21_g 50S ribosomal protein L40E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=42.32 E-value=11 Score=24.18 Aligned_cols=21 Identities=19% Similarity=0.384 Sum_probs=15.4
Q ss_pred CCCCCCCcccCCCCCccccCCCCCc
Q 014710 235 DDGCSGFLLRDSDDKGFTCQQCGLV 259 (420)
Q Consensus 235 c~~C~~~~~~~~~~~~~~C~~C~~~ 259 (420)
|++|... .....|.|.+||..
T Consensus 17 CpkC~a~----~~~gaw~CrKCG~~ 37 (51)
T 3j21_g 17 CLRCGAT----NPWGAKKCRKCGYK 37 (51)
T ss_dssp CTTTCCE----ECTTCSSCSSSSSC
T ss_pred CCCCCCc----CCCCceecCCCCCc
Confidence 5688865 23457999999975
No 331
>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=42.17 E-value=14 Score=25.81 Aligned_cols=26 Identities=27% Similarity=0.639 Sum_probs=20.7
Q ss_pred CCccCccccCCCC--CcCCCCCCcccccCh
Q 014710 26 SISRCDGCFASSN--LKKCSACQVVWYCGS 53 (420)
Q Consensus 26 ~~~~C~~C~~~~~--~~~C~~C~~~~yCs~ 53 (420)
....|..|-+.+. .+.|. |... ||++
T Consensus 24 ~~nRC~~CrKkvgL~gf~Cr-Cg~~-FCs~ 51 (74)
T 1wfl_A 24 KKNRCFMCRKKVGLTGFDCR-CGNL-FCGL 51 (74)
T ss_dssp CTTBCSSSCCBCGGGCEECT-TSCE-ECSS
T ss_pred cCCcChhhCCcccccCeecC-CCCE-echh
Confidence 4678999999843 57899 9985 9974
No 332
>3ga8_A HTH-type transcriptional regulator MQSA (YGIT/B30; helix-turn-helix, Zn-binding protein, DNA-binding, transcrip transcription regulation; HET: PE4; 1.70A {Escherichia coli k-12} PDB: 3hi2_A
Probab=41.76 E-value=27 Score=24.45 Aligned_cols=32 Identities=22% Similarity=0.400 Sum_probs=21.5
Q ss_pred CccccCCCCCc-cCHHHHHHHHHHHHHHHHHHh
Q 014710 249 KGFTCQQCGLV-RSKEEIKKIASEVNILSKKTL 280 (420)
Q Consensus 249 ~~~~C~~C~~~-~~~~~~~~~~~~~~~l~~~a~ 280 (420)
..|.|+.||.. .+.++.++..+.+..+.++++
T Consensus 35 p~~~C~~CGE~~~~~e~~~~~~~~~~~f~~~vd 67 (78)
T 3ga8_A 35 HGLYCVHCEESIMNKEESDAFMAQVKAFRASVN 67 (78)
T ss_dssp EEEEETTTCCEECCHHHHHHHHHHHHHHHHHHH
T ss_pred eeEECCCCCCEEECHHHHHHHHHHHHHHHHHHh
Confidence 57999999985 456666665555555555554
No 333
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=41.15 E-value=57 Score=23.95 Aligned_cols=53 Identities=23% Similarity=0.292 Sum_probs=33.9
Q ss_pred HhhHHHHhhcChHHHHHHHHHHHH----------HHHHhcCCCCchHHHHHHHHHHHHHHHhccc
Q 014710 361 TCGKLEWFLGDTENAIKSMTEAVE----------ILRITHGTNSPFMKELILKLEEAQAEASYKL 415 (420)
Q Consensus 361 ~La~~~~~~g~~~eA~~~l~~A~~----------i~~~~~G~~h~~~~~~~~~l~~~~~~~~~~~ 415 (420)
.+|..+...|++++|..++-+|+. |++.+.-+ +...-+..+|..+.+.+....
T Consensus 25 ~lGE~L~~~g~~e~av~Hf~nAl~Vc~qP~~LL~i~q~TlP~--~Vf~~Li~~l~~~~~r~~~~~ 87 (95)
T 1om2_A 25 QLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVLQQTLPP--PVFQMLLTKLPTISQRIVSAQ 87 (95)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHSCHHHHHHHHHHHSCC--HHHHHHHHHSCSHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHHHHHHhhCCH--HHHHHHHHHHHHHHhhccccc
Confidence 457777788999999998877765 55666533 234445566666655544433
No 334
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=40.99 E-value=1.6e+02 Score=29.92 Aligned_cols=18 Identities=11% Similarity=0.010 Sum_probs=11.0
Q ss_pred hhhcCCChHHHHHHHHHH
Q 014710 281 ALTSCGNHQEVVSTYKMI 298 (420)
Q Consensus 281 ~~~~~g~~~~a~~~~~~~ 298 (420)
....+++++.|++.|.++
T Consensus 690 ~al~~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 690 ASLQRFNFKLAIEAFTNA 707 (814)
T ss_dssp HHHHTTCHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHc
Confidence 345566677676666654
No 335
>1dl6_A Transcription factor II B (TFIIB); zinc ribbon, gene regulation; NMR {Homo sapiens} SCOP: g.41.3.1 PDB: 1rly_A 1ro4_A
Probab=39.67 E-value=15 Score=24.35 Aligned_cols=27 Identities=26% Similarity=0.519 Sum_probs=19.4
Q ss_pred CCCCCC-CcccCCCCCccccCCCCCccC
Q 014710 235 DDGCSG-FLLRDSDDKGFTCQQCGLVRS 261 (420)
Q Consensus 235 c~~C~~-~~~~~~~~~~~~C~~C~~~~~ 261 (420)
|+.|.+ .+..+.....+.|..||..+.
T Consensus 14 Cp~C~~~~lv~D~~~ge~vC~~CGlVl~ 41 (58)
T 1dl6_A 14 CPNHPDAILVEDYRAGDMICPECGLVVG 41 (58)
T ss_dssp BTTBSSSCCEECSSSCCEECTTTCCEEC
T ss_pred CcCCCCCceeEeCCCCeEEeCCCCCEEe
Confidence 578876 455555667799999997654
No 336
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=39.46 E-value=90 Score=24.92 Aligned_cols=41 Identities=12% Similarity=0.108 Sum_probs=31.1
Q ss_pred HHHHhcCCCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHH
Q 014710 343 VYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVE 384 (420)
Q Consensus 343 ~~~~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~ 384 (420)
++..+++ +.+.-+..++++|.+|-..|+..+|-+++.+|-+
T Consensus 113 i~~~~l~-n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~ 153 (172)
T 1wy6_A 113 IGREILK-NNEVSASILVAIANALRRVGDERDATTLLIEACK 153 (172)
T ss_dssp HHHHHC---CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHhc-cCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHH
Confidence 3444444 5555567889999999999999999999998854
No 337
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=39.33 E-value=99 Score=21.82 Aligned_cols=37 Identities=8% Similarity=0.147 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHhhhh
Q 014710 269 ASEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKL 305 (420)
Q Consensus 269 ~~~~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~ 305 (420)
.+..-.+..+|......|++++|+.+|...+......
T Consensus 8 ~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~~ 44 (83)
T 2v6y_A 8 EDMARKYAILAVKADKEGKVEDAITYYKKAIEVLSQI 44 (83)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 3445556677777788899999999999998865543
No 338
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=38.42 E-value=2.3e+02 Score=26.96 Aligned_cols=73 Identities=15% Similarity=0.088 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHh-cCCCChHHHHHHHHhhH
Q 014710 289 QEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRV-YPQFHPLLGLQYYTCGK 364 (420)
Q Consensus 289 ~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~-~g~~hp~~~~~l~~La~ 364 (420)
..++.+|++++...++.+...|.+-.. -++..+.+.+++.+|+.....+-.+...+ |..+.-.+=..+..+|.
T Consensus 281 p~~~~Lf~~AI~~ar~~Y~~~hvYPYt---YlgG~~~R~~~~~eAl~~wa~aa~Vi~~YnY~reDeEiYke~~eIan 354 (489)
T 4gq4_A 281 PDPLTLYHKGIASAKTYYRDEHIYPYM---YLAGYHCRNRNVREALQAWADTATVIQDYNYCREDEEIYKEFFEVAN 354 (489)
T ss_dssp CCHHHHHHHHHHHHHHHSTTCCSHHHH---HHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCTTCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhcccCccccee---ecchHHHHhhhHHHHHHHhhhhhhhhhhcccccchHHHHHHHHHHHH
Confidence 356789999999999999888865433 35677778899999999888877765544 55555554444444443
No 339
>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}
Probab=37.27 E-value=21 Score=24.66 Aligned_cols=32 Identities=28% Similarity=0.724 Sum_probs=25.2
Q ss_pred CCCccCccccCCC--CCcCCCCCCcccccChhhchh
Q 014710 25 SSISRCDGCFASS--NLKKCSACQVVWYCGSNCQKL 58 (420)
Q Consensus 25 ~~~~~C~~C~~~~--~~~~C~~C~~~~yCs~~C~~~ 58 (420)
...+.|++|...+ ....|..|++. |-+.|...
T Consensus 33 ~~pt~C~~C~~~l~~qG~kC~~C~~~--cHkkC~~~ 66 (72)
T 2fnf_X 33 GGPGWCDLCGREVLRQALRCANCKFT--CHSECRSL 66 (72)
T ss_dssp SSCCBCTTTSSBCSSCCEECTTSSCE--ECTGGGGG
T ss_pred CCCcchhhhhHHHHhCcCccCCCCCe--echhhhcc
Confidence 4578899998774 36789999996 88888764
No 340
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=37.12 E-value=44 Score=24.41 Aligned_cols=62 Identities=13% Similarity=0.082 Sum_probs=41.1
Q ss_pred HHHHhhcHHHHHHHHHHhHHHHHHhcCC--CChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhc
Q 014710 323 ILMELEDWKEALAYCQLTIPVYQRVYPQ--FHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITH 390 (420)
Q Consensus 323 ~~~~~g~~~~A~~~~~~~l~~~~~~~g~--~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~ 390 (420)
.+.+.|+|-+|-+..+.. +... ++ .....|.+..-.|..+...|+. |..++.+|+..++...
T Consensus 10 ~lfn~g~~~eaHEvlE~~---W~~~-~~~~~~~~qGLIq~Ava~~h~~~gn~--a~~ll~~a~~~L~~~~ 73 (94)
T 2cwy_A 10 GLWRAGRYYEVHEVLEPY---WLKA-TGEERRLLQGVILLAAALHQRRLGRP--GLRNLRKAEARLEGLP 73 (94)
T ss_dssp HHHHTTCHHHHHHHHHHH---HHHC-CHHHHHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHHHHTTCC
T ss_pred HHHhCCChHHHHHHHHHH---HhhC-CCchHHHHHHHHHHHHHHHHHHcCcH--HHHHHHHHHHHHHhCC
Confidence 445558888876655443 3333 32 2334565665566666678888 9999999999998763
No 341
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=36.33 E-value=1e+02 Score=28.50 Aligned_cols=85 Identities=9% Similarity=0.028 Sum_probs=51.2
Q ss_pred ChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhh-----cHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHH
Q 014710 287 NHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELE-----DWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYT 361 (420)
Q Consensus 287 ~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g-----~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~ 361 (420)
+++++++.+.+++. .+|.|+..-.-+..+...++... .+.++++++.+++.. +|.=-.++..
T Consensus 140 ~~~~EL~~~~k~L~-----~dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~--------dp~N~SAW~~ 206 (349)
T 3q7a_A 140 DPVSEIEYIHGSLL-----PDPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRV--------DGRNNSAWGW 206 (349)
T ss_dssp CCHHHHHHHHHHTS-----SCTTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHH--------CTTCHHHHHH
T ss_pred ChHHHHHHHHHHHH-----hCCCCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHh--------CCCCHHHHHH
Confidence 45566776666653 35666665554444443333221 234888888887764 3444456666
Q ss_pred hhHHHHhhcC-------hHHHHHHHHHHHH
Q 014710 362 CGKLEWFLGD-------TENAIKSMTEAVE 384 (420)
Q Consensus 362 La~~~~~~g~-------~~eA~~~l~~A~~ 384 (420)
.+.+...+++ +++++.++.+|+.
T Consensus 207 R~~lL~~l~~~~~~~~~~~eELe~~~~aI~ 236 (349)
T 3q7a_A 207 RWYLRVSRPGAETSSRSLQDELIYILKSIH 236 (349)
T ss_dssp HHHHHTTSTTCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhccccccchHHHHHHHHHHHHHHH
Confidence 6677666665 5777887777764
No 342
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=35.37 E-value=40 Score=32.59 Aligned_cols=73 Identities=16% Similarity=0.062 Sum_probs=54.3
Q ss_pred hHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcC--C--CChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHH
Q 014710 312 NLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYP--Q--FHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEIL 386 (420)
Q Consensus 312 ~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g--~--~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~ 386 (420)
-.+.+.+.|..+|.+.+....+..+.+.+ +.. ...| . .-...+.-+|-+|++++..+++.+|.+.|.+|++.+
T Consensus 174 ~~l~l~n~L~kiYFkl~~~~lckni~k~i-~~~-~~~p~~~~~p~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~l 250 (455)
T 3t5v_B 174 ILLYLVNKLNNIYFRIESPQLCSNIFKNF-QPK-SMLAHFNEYQLDQQIEYRYLLGRYYLLNSQVHNAFVQFNEAFQSL 250 (455)
T ss_dssp HHHHHHHHHHHHHHHSSCCTTHHHHHHTH-HHH-CCCSCGGGSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHh-ccC-CCCcChhhCCccceEeeeHHHHHHHHHHccHHHHHHHHHHHHHhc
Confidence 34556678889999999888877765432 322 1111 1 124788889999999999999999999999999983
No 343
>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=35.24 E-value=24 Score=25.08 Aligned_cols=42 Identities=14% Similarity=0.238 Sum_probs=29.6
Q ss_pred CCceeccCCCCCCccCccccCCC-----CCcCCCCCCcccccChhhchh
Q 014710 15 EPYVCVPNNSSSISRCDGCFASS-----NLKKCSACQVVWYCGSNCQKL 58 (420)
Q Consensus 15 ~p~~~~~~~~~~~~~C~~C~~~~-----~~~~C~~C~~~~yCs~~C~~~ 58 (420)
.+-...+..-...+.|++|.+.+ ....|..|++. |-+.|...
T Consensus 16 ~~H~F~~~~~~~pt~C~~C~~~lwGl~kqg~~C~~C~~~--~Hk~C~~~ 62 (83)
T 2yuu_A 16 KNHEFIATFFGQPTFCSVCKDFVWGLNKQGYKCRQCNAA--IHKKCIDK 62 (83)
T ss_dssp GGCCEEEECCSSCCCCSSSCCCCCSSSCCEEEETTTCCE--ECTTGGGT
T ss_pred CCCceEeEeCCCCcChhhcChhhccccccccccCCcCCe--eChhhhhh
Confidence 33333333445689999998873 24789999986 88999865
No 344
>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}
Probab=34.07 E-value=12 Score=25.10 Aligned_cols=31 Identities=26% Similarity=0.542 Sum_probs=24.9
Q ss_pred CCccCccccCCCC----CcCCCCCCcccccChhhchh
Q 014710 26 SISRCDGCFASSN----LKKCSACQVVWYCGSNCQKL 58 (420)
Q Consensus 26 ~~~~C~~C~~~~~----~~~C~~C~~~~yCs~~C~~~ 58 (420)
....|+.|.+... ...|.+|+.. |-++|+..
T Consensus 18 ~~~~C~~Cg~~i~~gkq~~kC~dC~~~--cH~~C~~~ 52 (61)
T 4b6d_A 18 KPESCVPCGKRIKFGKLSLKCRDCRVV--SHPECRDR 52 (61)
T ss_dssp SCEECTTTCCEECTTCEEEEESSSSCE--ECGGGGGG
T ss_pred CCcccccccCEEEEeeEeeECCCCCCe--EchhHhhc
Confidence 4689999977742 5789999996 99999864
No 345
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=34.06 E-value=13 Score=27.39 Aligned_cols=43 Identities=21% Similarity=0.526 Sum_probs=32.3
Q ss_pred CccCccccCCC-CCcCCCCCCcccccChhhchhhhhhhHhhchhhh
Q 014710 27 ISRCDGCFASS-NLKKCSACQVVWYCGSNCQKLDWKLHRLECQVLS 71 (420)
Q Consensus 27 ~~~C~~C~~~~-~~~~C~~C~~~~yCs~~C~~~~~~~H~~EC~~~~ 71 (420)
...|.-|+... .++.|..|+.. || ..|....|..++..||.=+
T Consensus 22 ~~~C~IC~~~~~~p~~~~~CgH~-FC-~~Ci~~~~~~~~~~CP~Cr 65 (100)
T 3lrq_A 22 VFRCFICMEKLRDARLCPHCSKL-CC-FSCIRRWLTEQRAQCPHCR 65 (100)
T ss_dssp HTBCTTTCSBCSSEEECTTTCCE-EE-HHHHHHHHHHTCSBCTTTC
T ss_pred CCCCccCCccccCccccCCCCCh-hh-HHHHHHHHHHCcCCCCCCC
Confidence 56799999884 46777899986 99 7899886655547887644
No 346
>3j21_V 50S ribosomal protein L24E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=33.98 E-value=20 Score=24.42 Aligned_cols=32 Identities=16% Similarity=0.489 Sum_probs=24.7
Q ss_pred CccCccccCCC-C----CcCCCCCCcccccChhhchh
Q 014710 27 ISRCDGCFASS-N----LKKCSACQVVWYCGSNCQKL 58 (420)
Q Consensus 27 ~~~C~~C~~~~-~----~~~C~~C~~~~yCs~~C~~~ 58 (420)
...|++|.... | ...=.+++...|||..|.+.
T Consensus 4 ~~~C~Fcg~~IyPG~G~~~Vr~Dgkvf~FcssKC~k~ 40 (66)
T 3j21_V 4 WNVCSYCGKPFEPGTGKMYVRNDGRVLFFCSRKCERY 40 (66)
T ss_dssp CCBCTTTCSBCCTTCCEEEECSSSCEEEESSHHHHHH
T ss_pred eeEecCcCCcccCCCCeEEEecCCcEEEEECHHHHHH
Confidence 45799998883 2 34456889889999999975
No 347
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=33.79 E-value=19 Score=24.75 Aligned_cols=25 Identities=24% Similarity=0.335 Sum_probs=19.1
Q ss_pred CCCCCCCcccCCCCCccccCCCCCc
Q 014710 235 DDGCSGFLLRDSDDKGFTCQQCGLV 259 (420)
Q Consensus 235 c~~C~~~~~~~~~~~~~~C~~C~~~ 259 (420)
|+.|.+.+....+.....|+.|+..
T Consensus 11 CP~ck~~L~~~~~~~~LiC~~cg~~ 35 (69)
T 2pk7_A 11 CPICKGPLKLSADKTELISKGAGLA 35 (69)
T ss_dssp CTTTCCCCEECTTSSEEEETTTTEE
T ss_pred CCCCCCcCeEeCCCCEEEcCCCCcE
Confidence 4799998876665667789999864
No 348
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=33.78 E-value=1.3e+02 Score=21.34 Aligned_cols=36 Identities=14% Similarity=0.214 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHhhh
Q 014710 269 ASEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKK 304 (420)
Q Consensus 269 ~~~~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~ 304 (420)
.+..-.+..+|......|++++|+.+|...+.....
T Consensus 16 ~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~ 51 (83)
T 2w2u_A 16 EEMARKYAINAVKADKEGNAEEAITNYKKAIEVLAQ 51 (83)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 344555667777778889999999999998886544
No 349
>1brv_A Protein G, BRSV-G region; attachment protein G of bovine respiratory syncytial virus, immunoglobulin-binding protein; NMR {Bovine respiratory syncytial virus} SCOP: j.33.1.1
Probab=33.70 E-value=14 Score=21.01 Aligned_cols=22 Identities=27% Similarity=0.489 Sum_probs=17.4
Q ss_pred CCCCcCCCCCCcccccChhhch
Q 014710 36 SSNLKKCSACQVVWYCGSNCQK 57 (420)
Q Consensus 36 ~~~~~~C~~C~~~~yCs~~C~~ 57 (420)
..+.+||+-|..-.-|..-|+.
T Consensus 10 ~l~~VPCsiC~~N~~C~slCq~ 31 (32)
T 1brv_A 10 TLPYVPCSTCEGNLACLSLCHI 31 (32)
T ss_pred ccccccccccCCChhHHHHhhc
Confidence 3568999999987788887764
No 350
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=33.59 E-value=1.3e+02 Score=21.43 Aligned_cols=41 Identities=12% Similarity=0.059 Sum_probs=28.7
Q ss_pred HHHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhc-CCCChhH
Q 014710 273 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLY-HPFSVNL 313 (420)
Q Consensus 273 ~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l-~~~h~~~ 313 (420)
..+..+|......|++++|+.+|..++......+ ...++..
T Consensus 17 ~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ll~alk~e~d~~~ 58 (86)
T 4a5x_A 17 ATVLKRAVELDSESRYPQALVCYQEGIDLLLQVLKGTKDNTK 58 (86)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTCCCHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhhCCCHHH
Confidence 3455666667778999999999999988765543 3334443
No 351
>1wvo_A Sialic acid synthase; antifreeze protein like domain, N-acetylneuraminic acid phosphate synthase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=33.16 E-value=17 Score=25.75 Aligned_cols=19 Identities=26% Similarity=0.323 Sum_probs=16.2
Q ss_pred EEEEecCCCCCCccCCChH
Q 014710 204 VVRAVQHVPKGAEGQFDDI 222 (420)
Q Consensus 204 ~vra~r~I~~Gee~~~~~~ 222 (420)
.|+|.++|++||.++-.++
T Consensus 8 slvA~rdI~~Gevit~~dl 26 (79)
T 1wvo_A 8 SVVAKVKIPEGTILTMDML 26 (79)
T ss_dssp EEEESSCBCTTCBCCGGGE
T ss_pred EEEEeCccCCCCCcCHHHe
Confidence 6789999999999886654
No 352
>3uej_A NPKC-delta, protein kinase C delta type; proteine kinase cdelta, phosphotransferase, anesthetic bindi metal binding protein; 1.30A {Mus musculus} PDB: 3ugi_A 3ugl_A 3uey_A 3ugd_A 3uff_A 1ptq_A 1ptr_A*
Probab=32.89 E-value=19 Score=24.17 Aligned_cols=32 Identities=25% Similarity=0.464 Sum_probs=24.9
Q ss_pred CCCccCccccCCC-----CCcCCCCCCcccccChhhchh
Q 014710 25 SSISRCDGCFASS-----NLKKCSACQVVWYCGSNCQKL 58 (420)
Q Consensus 25 ~~~~~C~~C~~~~-----~~~~C~~C~~~~yCs~~C~~~ 58 (420)
...+.|++|.+.+ ....|..|++. |-+.|...
T Consensus 18 ~~pt~C~~C~~~l~Gl~~qg~~C~~C~~~--~Hk~C~~~ 54 (65)
T 3uej_A 18 MSPTFCDHCGSLLWGLVKQGLKCEDCGMN--VHHKCREK 54 (65)
T ss_dssp SSCCBCTTTCCBCCSSSSCEEEETTTCCE--ECHHHHTT
T ss_pred CCCCcccccChhhhccCceeeECCCCCCe--EchhHhhh
Confidence 4688999998773 25789999986 88888764
No 353
>2k4x_A 30S ribosomal protein S27AE; metal-binding, ribonucleoprotein, zinc, zinc-finger, structural genomics, PSI-2; NMR {Thermoplasma acidophilum} SCOP: g.41.8.8
Probab=32.19 E-value=20 Score=23.42 Aligned_cols=25 Identities=16% Similarity=0.507 Sum_probs=16.2
Q ss_pred CCCCCCCcccCCCCCccccCCCCCc
Q 014710 235 DDGCSGFLLRDSDDKGFTCQQCGLV 259 (420)
Q Consensus 235 c~~C~~~~~~~~~~~~~~C~~C~~~ 259 (420)
|++|...+......+.|.|.+|+.+
T Consensus 21 CPkCG~~~~ma~~~dr~~C~kCgyt 45 (55)
T 2k4x_A 21 CPRCGPGVFLAEHADRYSCGRCGYT 45 (55)
T ss_dssp CTTTTTTCCCEECSSEEECTTTCCC
T ss_pred CcCCCCceeEeccCCEEECCCCCCE
Confidence 4688864432333457899999864
No 354
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=31.84 E-value=15 Score=23.27 Aligned_cols=32 Identities=22% Similarity=0.435 Sum_probs=25.0
Q ss_pred CCCccCccccCC-CCCcCCCCCCcccccChhhchh
Q 014710 25 SSISRCDGCFAS-SNLKKCSACQVVWYCGSNCQKL 58 (420)
Q Consensus 25 ~~~~~C~~C~~~-~~~~~C~~C~~~~yCs~~C~~~ 58 (420)
...+.|++|.+. .....|..|++. |-++|...
T Consensus 12 ~~pt~C~~C~~~l~qG~~C~~C~~~--~H~~C~~~ 44 (52)
T 1faq_A 12 LKLAFCDICQKFLLNGFRCQTCGYK--FHEHCSTK 44 (52)
T ss_dssp SSCEECTTSSSEECSEEECTTTTCC--BCSTTSSS
T ss_pred CCCcCCCCcccccccCCEeCCCCCe--EChhHHhh
Confidence 357899999877 456789999986 88888764
No 355
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=31.53 E-value=1.5e+02 Score=27.63 Aligned_cols=72 Identities=13% Similarity=0.043 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHh-cCCCChHHHHHHHHhhH
Q 014710 290 EVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRV-YPQFHPLLGLQYYTCGK 364 (420)
Q Consensus 290 ~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~-~g~~hp~~~~~l~~La~ 364 (420)
.++.+|.+++...+..++..|++-.- -++..+.+.+++.+|+.....+-++.+.+ |..+.-.+=..++++|.
T Consensus 275 ~~l~L~~~AI~sa~~yY~n~HvYPYt---ylgGy~yR~~~~reAl~~WA~Aa~Vi~~YNY~reDeEIYKEf~eIAn 347 (472)
T 3re2_A 275 PAEELFKEAITVAKREYSDHHIYPYT---YLGGYYYRKKKYYEAIASWVDAGYVAGKYNYSKDDEEMYKEFHEIAN 347 (472)
T ss_dssp CHHHHHHHHHHHHHHHSTTCCSHHHH---HHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCGGGHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhccCCccchh---hhhhhhhhcchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHH
Confidence 47889999999888888888876543 35667888899999998877776665443 45555555555555554
No 356
>2con_A RUH-035 protein, NIN one binding protein; ribosome, RNA binding protein, unknown function, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.41.15.1
Probab=31.46 E-value=20 Score=25.34 Aligned_cols=23 Identities=39% Similarity=0.849 Sum_probs=17.5
Q ss_pred CCccCccccCCC---CCcCCCCCCcc
Q 014710 26 SISRCDGCFASS---NLKKCSACQVV 48 (420)
Q Consensus 26 ~~~~C~~C~~~~---~~~~C~~C~~~ 48 (420)
....|+.||+.. +...||.|+..
T Consensus 14 ~iLrC~aCf~~t~~~~k~FCp~CGn~ 39 (79)
T 2con_A 14 YILRCHGCFKTTSDMNRVFCGHCGNK 39 (79)
T ss_dssp EEEECSSSCCEESCSSCCSCSSSCCS
T ss_pred eeeEecccceECCCcccccccccCcc
Confidence 356899999983 46789998763
No 357
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=31.46 E-value=80 Score=22.18 Aligned_cols=39 Identities=18% Similarity=0.175 Sum_probs=30.6
Q ss_pred HHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCC-CChHHH
Q 014710 318 EKLIKILMELEDWKEALAYCQLTIPVYQRVYPQ-FHPLLG 356 (420)
Q Consensus 318 ~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~-~hp~~~ 356 (420)
-.+|+-|.-.|+|+.|+.|++.++....++... ..|..-
T Consensus 16 ~k~ARe~Al~GnYdta~~yY~g~~~qI~k~l~~~~d~~~r 55 (78)
T 2rpa_A 16 VKLAREYALLGNYDSAMVYYQGVLDQMNKYLYSVKDTHLR 55 (78)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHTCSCHHHH
T ss_pred HHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhcCCHHHH
Confidence 457778888999999999999999988877653 344433
No 358
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=30.99 E-value=1.2e+02 Score=30.57 Aligned_cols=58 Identities=10% Similarity=0.045 Sum_probs=44.8
Q ss_pred HHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHH
Q 014710 319 KLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVE 384 (420)
Q Consensus 319 ~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~ 384 (420)
..+......|+|+.|..+..++ +...+......|-+|.++..+|+.++|..+|+++..
T Consensus 290 ~~~r~Alr~~d~~~a~~~~~~l--------~~~~~~~~r~~YW~~ra~~~~g~~~~a~~~~~~~a~ 347 (618)
T 1qsa_A 290 RRVRMALGTGDRRGLNTWLARL--------PMEAKEKDEWRYWQADLLLERGREAEAKEILHQLMQ 347 (618)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHS--------CTTGGGSHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCHHHHHHHHHHc--------cccccccHhHHHHHHHHHHHcCCHHHHHHHHHHHhc
Confidence 3444455679999999877554 334446778899999999999999999999998765
No 359
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=30.61 E-value=2.1e+02 Score=27.77 Aligned_cols=40 Identities=20% Similarity=0.138 Sum_probs=32.3
Q ss_pred HHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHhhc
Q 014710 331 KEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLG 370 (420)
Q Consensus 331 ~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~~g 370 (420)
+.|++.+++++..++++-..+.|.....+.++++.|-..|
T Consensus 449 ~kAi~~Y~~Ai~~L~k~~~tdd~~~v~~~~~~ak~yE~aG 488 (526)
T 2wb7_A 449 QGAIDEYKAAINDLQKAAQQDDYQMFLNYLNAAKKHEMAG 488 (526)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhccCCHHHHHHHHHHhhhhhhcc
Confidence 4678888888888888888899999999999988865443
No 360
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=30.51 E-value=20 Score=24.58 Aligned_cols=25 Identities=24% Similarity=0.368 Sum_probs=18.9
Q ss_pred CCCCCCCcccCCCCCccccCCCCCc
Q 014710 235 DDGCSGFLLRDSDDKGFTCQQCGLV 259 (420)
Q Consensus 235 c~~C~~~~~~~~~~~~~~C~~C~~~ 259 (420)
|+.|.+.+..........|+.|+..
T Consensus 11 CP~ck~~L~~~~~~~~LiC~~cg~~ 35 (68)
T 2hf1_A 11 CPLCKGPLVFDKSKDELICKGDRLA 35 (68)
T ss_dssp CTTTCCBCEEETTTTEEEETTTTEE
T ss_pred CCCCCCcCeEeCCCCEEEcCCCCcE
Confidence 5799998766655666789999853
No 361
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=30.01 E-value=21 Score=24.43 Aligned_cols=30 Identities=20% Similarity=0.210 Sum_probs=20.6
Q ss_pred HhcCccccCCCCCCCcccCCCCCccccCCCCC
Q 014710 227 ILEGYRCKDDGCSGFLLRDSDDKGFTCQQCGL 258 (420)
Q Consensus 227 l~~~~~C~c~~C~~~~~~~~~~~~~~C~~C~~ 258 (420)
|++-..| +.|.+.+....+.....|+.|+.
T Consensus 7 LLeiL~C--P~ck~~L~~~~~~g~LvC~~c~~ 36 (67)
T 2jny_A 7 LLEVLAC--PKDKGPLRYLESEQLLVNERLNL 36 (67)
T ss_dssp GTCCCBC--TTTCCBCEEETTTTEEEETTTTE
T ss_pred HHHHhCC--CCCCCcCeEeCCCCEEEcCCCCc
Confidence 3334444 79999876665566678999975
No 362
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=29.88 E-value=1.2e+02 Score=24.60 Aligned_cols=49 Identities=6% Similarity=0.032 Sum_probs=38.2
Q ss_pred CChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHH
Q 014710 286 GNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIP 342 (420)
Q Consensus 286 g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~ 342 (420)
++.++|++.|+.++.. |.. ...++..-|+.-..+|+++.|.+...+++.
T Consensus 74 ~D~d~aR~vy~~a~~~-----hKk---FAKiwi~~AqFEiRqgnl~kARkILg~AiG 122 (161)
T 4h7y_A 74 QEPDDARDYFQMARAN-----CKK---FAFVHISFAQFELSQGNVKKSKQLLQKAVE 122 (161)
T ss_dssp HCGGGCHHHHHHHHHH-----CTT---BHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHH-----hHH---HHHHHHHHHHHHHHcccHHHHHHHHHHHhc
Confidence 4667888888888764 222 277777778888889999999999988877
No 363
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=29.72 E-value=1.3e+02 Score=21.75 Aligned_cols=19 Identities=26% Similarity=0.408 Sum_probs=10.5
Q ss_pred cChHHHHHHHHHHHHHHHH
Q 014710 370 GDTENAIKSMTEAVEILRI 388 (420)
Q Consensus 370 g~~~eA~~~l~~A~~i~~~ 388 (420)
|+.++|+.+|++.+.-+..
T Consensus 33 G~k~~A~~~YkkGi~eL~~ 51 (89)
T 3eab_A 33 GQKEQAVEWYKKGIEELEK 51 (89)
T ss_dssp SSGGGSHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHh
Confidence 5556666666555554443
No 364
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=29.50 E-value=21 Score=24.48 Aligned_cols=25 Identities=20% Similarity=0.109 Sum_probs=18.7
Q ss_pred CCCCCCCcccCCCCCccccCCCCCc
Q 014710 235 DDGCSGFLLRDSDDKGFTCQQCGLV 259 (420)
Q Consensus 235 c~~C~~~~~~~~~~~~~~C~~C~~~ 259 (420)
|+.|.+.+....+.....|+.|+..
T Consensus 11 CP~ck~~L~~~~~~~~LiC~~cg~~ 35 (68)
T 2jr6_A 11 CPVTKGRLEYHQDKQELWSRQAKLA 35 (68)
T ss_dssp CSSSCCBCEEETTTTEEEETTTTEE
T ss_pred CCCCCCcCeEeCCCCEEEcCCCCcE
Confidence 4799988766655566789999853
No 365
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=29.20 E-value=63 Score=27.28 Aligned_cols=33 Identities=21% Similarity=0.116 Sum_probs=29.4
Q ss_pred hHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHH
Q 014710 353 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 385 (420)
Q Consensus 353 p~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i 385 (420)
.....-+|-+|++++..+++.+|.+.|.+|+..
T Consensus 11 ~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~ 43 (203)
T 3t5x_A 11 AQRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEH 43 (203)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 456778889999999999999999999999885
No 366
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=28.97 E-value=20 Score=24.71 Aligned_cols=25 Identities=20% Similarity=0.266 Sum_probs=18.7
Q ss_pred CCCCCCCcccCCCCCccccCCCCCc
Q 014710 235 DDGCSGFLLRDSDDKGFTCQQCGLV 259 (420)
Q Consensus 235 c~~C~~~~~~~~~~~~~~C~~C~~~ 259 (420)
|+.|.+.+..........|+.|+..
T Consensus 11 CP~ck~~L~~~~~~~~LiC~~cg~~ 35 (70)
T 2js4_A 11 CPVCKGRLEFQRAQAELVCNADRLA 35 (70)
T ss_dssp CTTTCCBEEEETTTTEEEETTTTEE
T ss_pred CCCCCCcCEEeCCCCEEEcCCCCce
Confidence 5799998766655566789999853
No 367
>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus}
Probab=28.59 E-value=26 Score=23.10 Aligned_cols=32 Identities=28% Similarity=0.724 Sum_probs=24.8
Q ss_pred CCCccCccccCCC--CCcCCCCCCcccccChhhchh
Q 014710 25 SSISRCDGCFASS--NLKKCSACQVVWYCGSNCQKL 58 (420)
Q Consensus 25 ~~~~~C~~C~~~~--~~~~C~~C~~~~yCs~~C~~~ 58 (420)
...+.|++|...+ ....|..|++. |-+.|...
T Consensus 20 ~~pt~C~~C~~~i~kqg~kC~~C~~~--cH~kC~~~ 53 (59)
T 1rfh_A 20 GGPGWCDLCGREVLRQALRCANCKFT--CHSECRSL 53 (59)
T ss_dssp SCCEECTTTCSEECSCCEECTTTSCE--ECHHHHTT
T ss_pred CCCeEchhcchhhhhCccEeCCCCCe--Eehhhhhh
Confidence 4578999997763 36789999996 88888753
No 368
>3j21_i 50S ribosomal protein L37AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=28.34 E-value=15 Score=26.32 Aligned_cols=29 Identities=21% Similarity=0.469 Sum_probs=19.6
Q ss_pred CccccCCCCCCCcccCCCCCccccCCCCCcc
Q 014710 230 GYRCKDDGCSGFLLRDSDDKGFTCQQCGLVR 260 (420)
Q Consensus 230 ~~~C~c~~C~~~~~~~~~~~~~~C~~C~~~~ 260 (420)
.|.| +.|...-........|.|.+|+...
T Consensus 35 ky~C--pfCGk~~vkR~a~GIW~C~kCg~~~ 63 (83)
T 3j21_i 35 KHTC--PVCGRKAVKRISTGIWQCQKCGATF 63 (83)
T ss_dssp CBCC--SSSCSSCEEEEETTEEEETTTCCEE
T ss_pred ccCC--CCCCCceeEecCcCeEEcCCCCCEE
Confidence 4665 6888654333445679999998753
No 369
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=28.33 E-value=56 Score=22.69 Aligned_cols=26 Identities=23% Similarity=0.359 Sum_probs=20.5
Q ss_pred HHhhHHHHhhcChHHHHHHHHHHHHH
Q 014710 360 YTCGKLEWFLGDTENAIKSMTEAVEI 385 (420)
Q Consensus 360 ~~La~~~~~~g~~~eA~~~l~~A~~i 385 (420)
..+|..+...|++++|..++-+|+.+
T Consensus 21 V~~GE~L~~~g~~~~~~~hf~nAl~V 46 (73)
T 3ax2_A 21 IQLGEELLAQGDYEKGVDHLTNAIAV 46 (73)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 35677777889999999988888763
No 370
>1vdy_A Hypothetical protein (RAFL09-17-B18); structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Arabidopsis thaliana} PDB: 2dcp_A
Probab=28.09 E-value=92 Score=24.64 Aligned_cols=24 Identities=4% Similarity=-0.312 Sum_probs=10.9
Q ss_pred HHHhcCCCChHHHHHHHHhhHHHH
Q 014710 344 YQRVYPQFHPLLGLQYYTCGKLEW 367 (420)
Q Consensus 344 ~~~~~g~~hp~~~~~l~~La~~~~ 367 (420)
.+..--.+.|--|+.|.++|++-.
T Consensus 17 ~~ATs~d~~~~pgylm~EIA~~T~ 40 (140)
T 1vdy_A 17 DAVTSDEDKVAPVYKLEEICDLLR 40 (140)
T ss_dssp HHTTCSCSSCCCHHHHHHHHHHHH
T ss_pred HHHhcCCCCCCcHHHHHHHHHHHH
Confidence 333333444445555555555433
No 371
>3iqc_A FLIS, flagellar protein; chaperone, flagellum; 2.70A {Helicobacter pylori} SCOP: a.24.19.0 PDB: 3k1i_A
Probab=28.01 E-value=2.1e+02 Score=22.14 Aligned_cols=91 Identities=5% Similarity=0.045 Sum_probs=55.4
Q ss_pred cCHHHHHHH-HHHHHHHHHHHhhhhcCCChHHHHHHHHHHHHHhhhhcCCCChhH-HHHHHHHHHHHHHh----------
Q 014710 260 RSKEEIKKI-ASEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNL-MQTREKLIKILMEL---------- 327 (420)
Q Consensus 260 ~~~~~~~~~-~~~~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~-~~~~~~L~~~~~~~---------- 327 (420)
-++.++..+ .+.+-..+..|.....+|++++.-....++..+...+...-+..- ..+..+|..+|...
T Consensus 23 asP~~Li~mLydgal~~l~~A~~ai~~~d~~~k~~~i~KA~~Ii~~L~~sLd~e~GgeiA~nL~~LY~y~~~~L~~An~~ 102 (131)
T 3iqc_A 23 ESPAKLIEMLYEGILRFSSQAKRCIENEDIEKKIYYINRVTDIFTELLNILDYEKGGEVAVYLTGLYTHQIKVLTQANVE 102 (131)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTBCHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhcCCccccHHHHHHHHHHHHHHHHHHHhhhh
Confidence 356665544 366666677777788889998776666666655444333334443 24444555444432
Q ss_pred ---hcHHHHHHHHHHhHHHHHHhcCC
Q 014710 328 ---EDWKEALAYCQLTIPVYQRVYPQ 350 (420)
Q Consensus 328 ---g~~~~A~~~~~~~l~~~~~~~g~ 350 (420)
..++++..+...+.+.|+.+-+.
T Consensus 103 ~d~~~l~ev~~ll~~lr~aW~~i~~~ 128 (131)
T 3iqc_A 103 NDASKIDLVLNVARGLLEAWREIHSD 128 (131)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45677777777777777776543
No 372
>3iz5_m 60S ribosomal protein L43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_m 1ysh_D 2zkr_z
Probab=27.96 E-value=17 Score=26.47 Aligned_cols=29 Identities=28% Similarity=0.725 Sum_probs=19.5
Q ss_pred CccccCCCCCCCcccCCCCCccccCCCCCcc
Q 014710 230 GYRCKDDGCSGFLLRDSDDKGFTCQQCGLVR 260 (420)
Q Consensus 230 ~~~C~c~~C~~~~~~~~~~~~~~C~~C~~~~ 260 (420)
.|.| +.|...-........|.|..|+...
T Consensus 36 ky~C--pfCgk~~vkR~a~GIW~C~~Cg~~~ 64 (92)
T 3iz5_m 36 KYFC--EFCGKFAVKRKAVGIWGCKDCGKVK 64 (92)
T ss_dssp CBCC--TTTCSSCBEEEETTEEECSSSCCEE
T ss_pred cccC--cccCCCeeEecCcceEEcCCCCCEE
Confidence 4655 6888654333445679999998653
No 373
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=27.43 E-value=2.6e+02 Score=23.12 Aligned_cols=77 Identities=14% Similarity=0.050 Sum_probs=49.3
Q ss_pred hcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHH--H----------HHhcCCCChHHHHHHHHhhHHHHhhcCh
Q 014710 305 LYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPV--Y----------QRVYPQFHPLLGLQYYTCGKLEWFLGDT 372 (420)
Q Consensus 305 ~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~--~----------~~~~g~~hp~~~~~l~~La~~~~~~g~~ 372 (420)
+||..|..+...+..| .|....+++.|+.-...++.. - .-+.-+.. .-.-+.-+|.+.-..|+.
T Consensus 55 ~L~~lNT~Ts~YYk~L--Cy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~D--kEfFy~l~a~lltq~g~r 130 (242)
T 3kae_A 55 HLHKLNTCTSKYYESL--CYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGD--EEFFESLLGDLCTLSGYR 130 (242)
T ss_dssp HHHTCCBHHHHHHHHH--HHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTC--HHHHHHHHHHHHHHTTCH
T ss_pred HHHhcchHHHHHHHHH--HHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeeccch--HHHHHHHHHHHHHHhcCH
Confidence 3455555554444332 466778999999888877721 0 11111222 233456679999999999
Q ss_pred HHHHHHHHHHHHH
Q 014710 373 ENAIKSMTEAVEI 385 (420)
Q Consensus 373 ~eA~~~l~~A~~i 385 (420)
+||+.++..+..+
T Consensus 131 ~EaI~y~~~Sf~~ 143 (242)
T 3kae_A 131 EEGIGHYVRSFGK 143 (242)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHhhhHhhhhcCC
Confidence 9999999987663
No 374
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=27.40 E-value=2.4e+02 Score=22.55 Aligned_cols=44 Identities=11% Similarity=0.141 Sum_probs=31.5
Q ss_pred HHHHHhcC-CCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHH
Q 014710 342 PVYQRVYP-QFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 385 (420)
Q Consensus 342 ~~~~~~~g-~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i 385 (420)
+++..++. +-=...+.-+-..|..+...|++++|..+|+.+++-
T Consensus 86 ~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~ 130 (152)
T 4a1g_A 86 QFFEFLYNHGIGTLSSPLYIAWAGHLEAQGELQHASAVLQRGIQN 130 (152)
T ss_dssp HHHHHHHTTTTTTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 34444433 233445667777889999999999999999988764
No 375
>3qt1_I DNA-directed RNA polymerases I, II, and III subun; transferase-transcription complex, RNA polymerase II, transc elongation; 4.30A {Saccharomyces cerevisiae}
Probab=27.01 E-value=38 Score=26.62 Aligned_cols=25 Identities=28% Similarity=0.639 Sum_probs=19.1
Q ss_pred CCCCCCCcccCCCC----CccccCCCCCc
Q 014710 235 DDGCSGFLLRDSDD----KGFTCQQCGLV 259 (420)
Q Consensus 235 c~~C~~~~~~~~~~----~~~~C~~C~~~ 259 (420)
|+.|.+.+.|..+. ..|.|..|+..
T Consensus 27 CPeCgNmL~pked~~~~~l~~~CrtCgY~ 55 (133)
T 3qt1_I 27 CRDCNNMLYPREDKENNRLLFECRTCSYV 55 (133)
T ss_dssp CTTTCCBCBCCBCTTTCCBCCBCSSSCCB
T ss_pred CCCCCCEeeECccCCCceeEEECCCCCCc
Confidence 58999988776542 35999999864
No 376
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=26.24 E-value=3.5e+02 Score=25.99 Aligned_cols=14 Identities=0% Similarity=-0.130 Sum_probs=7.7
Q ss_pred cHHHHHHHHHHhHH
Q 014710 329 DWKEALAYCQLTIP 342 (420)
Q Consensus 329 ~~~~A~~~~~~~l~ 342 (420)
+.+.|...+++++.
T Consensus 335 d~~~ar~ife~al~ 348 (493)
T 2uy1_A 335 SRATPYNIFSSGLL 348 (493)
T ss_dssp CSHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHH
Confidence 45556555555544
No 377
>2ra1_A Surface layer protein; triple coiled-coil, S-layer protein, protein binding, sugar protein; 2.41A {Geobacillus stearothermophilus}
Probab=25.58 E-value=4.2e+02 Score=24.76 Aligned_cols=52 Identities=12% Similarity=0.054 Sum_probs=36.6
Q ss_pred hHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHH
Q 014710 353 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEA 407 (420)
Q Consensus 353 p~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~G~~h~~~~~~~~~l~~~ 407 (420)
|........=++.....|++++|...|.++-+-+...- ..+..++......+
T Consensus 170 ~Itv~~~~~~~~~a~~~g~l~~a~~~l~~v~~~l~kv~---d~FkaeL~~aa~~a 221 (412)
T 2ra1_A 170 DITVAMKAREAQDAVKAGNLDKAKAALDQVNQYVSKVT---DAFKAELQKAAQDA 221 (412)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHGGGCC---STTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHhhh---HHHHHHHHHhhhhh
Confidence 44444444445666688999999999999999988873 34666666655554
No 378
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=25.57 E-value=41 Score=22.48 Aligned_cols=33 Identities=27% Similarity=0.447 Sum_probs=25.5
Q ss_pred CCCCccCccccCCC-----CCcCCCCCCcccccChhhchh
Q 014710 24 SSSISRCDGCFASS-----NLKKCSACQVVWYCGSNCQKL 58 (420)
Q Consensus 24 ~~~~~~C~~C~~~~-----~~~~C~~C~~~~yCs~~C~~~ 58 (420)
-...+.|++|.+.+ ....|..|++. |-+.|...
T Consensus 20 ~~~pt~C~~C~~~l~Gl~~qg~~C~~C~~~--~Hk~C~~~ 57 (65)
T 2enz_A 20 YKSPTFCEHCGTLLWGLARQGLKCDACGMN--VHHRCQTK 57 (65)
T ss_dssp CCSCCBCSSSCCBCCCSSSCSEEESSSCCE--ECTTTTTT
T ss_pred CCCCcCchhcChhheecCCcccccCCCCCc--cCHhHHhh
Confidence 34679999998873 35789999986 88888764
No 379
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*
Probab=25.41 E-value=25 Score=21.94 Aligned_cols=32 Identities=25% Similarity=0.464 Sum_probs=24.7
Q ss_pred CCCccCccccCCC-----CCcCCCCCCcccccChhhchh
Q 014710 25 SSISRCDGCFASS-----NLKKCSACQVVWYCGSNCQKL 58 (420)
Q Consensus 25 ~~~~~C~~C~~~~-----~~~~C~~C~~~~yCs~~C~~~ 58 (420)
...+.|++|.+.+ ....|..|++. |-+.|...
T Consensus 9 ~~pt~C~~C~~~l~g~~~qg~~C~~C~~~--~H~~C~~~ 45 (50)
T 1ptq_A 9 MSPTFCDHCGSLLWGLVKQGLKCEDCGMN--VHHKCREK 45 (50)
T ss_dssp SSCCBCTTTCCBCCSSSSCEEEETTTCCE--ECHHHHTT
T ss_pred CCCCCcCCCCceeeccCCccCEeCCCCCe--ECHHHhhh
Confidence 3578999998873 25789999986 88888754
No 380
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=25.33 E-value=3.9e+02 Score=24.40 Aligned_cols=30 Identities=10% Similarity=0.109 Sum_probs=19.8
Q ss_pred hhHHHHHHHHHHHHHHhhcHHHHHHHHHHh
Q 014710 311 VNLMQTREKLIKILMELEDWKEALAYCQLT 340 (420)
Q Consensus 311 ~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~ 340 (420)
+.-.+.+..++.-|.+.++|++|++++...
T Consensus 32 YEAHQ~~RTi~~Ry~~~k~y~eAidLL~~G 61 (336)
T 3lpz_A 32 YEAAQETRLVAARYSKQGNWAAAVDILASV 61 (336)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhhcCHHHHHHHHHHH
Confidence 445566666777777777777777765433
No 381
>2row_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=25.30 E-value=66 Score=22.96 Aligned_cols=33 Identities=15% Similarity=0.518 Sum_probs=25.5
Q ss_pred CCCCccCccccCC-CC------CcCCCCCCcccccChhhchh
Q 014710 24 SSSISRCDGCFAS-SN------LKKCSACQVVWYCGSNCQKL 58 (420)
Q Consensus 24 ~~~~~~C~~C~~~-~~------~~~C~~C~~~~yCs~~C~~~ 58 (420)
-...+.|++|... +. ...|..|++. |-+.|..+
T Consensus 32 ~~~PT~Cd~C~~~lWGl~kqp~G~~C~~C~~~--~HkrC~~k 71 (84)
T 2row_A 32 YHFPTNCEACMKPLWHMFKPPPALECRRCHIK--CHKDHMDK 71 (84)
T ss_dssp CSSCEECSSSSSEECCSSSCCCEEEESSSCCE--EEHHHHHH
T ss_pred CCCCcchhhcCHhhhccccCCCCCEecCCCCc--cchhHhCC
Confidence 3468999999776 22 4579999986 88999874
No 382
>1orj_A Flagellar protein FLIS; flagellin, flagellar export, chaperone, flagellum, four HELI; 2.25A {Aquifex aeolicus} SCOP: a.24.19.1 PDB: 1ory_A
Probab=25.21 E-value=2.4e+02 Score=21.83 Aligned_cols=89 Identities=10% Similarity=0.031 Sum_probs=46.9
Q ss_pred CHHHHHHH-HHHHHHHHHHHhhhhcCCCh-HHH---HHHHHHHHHHhhhhcCCCChhH-HHHHHHHHHHHHH--------
Q 014710 261 SKEEIKKI-ASEVNILSKKTLALTSCGNH-QEV---VSTYKMIEKLQKKLYHPFSVNL-MQTREKLIKILME-------- 326 (420)
Q Consensus 261 ~~~~~~~~-~~~~~~l~~~a~~~~~~g~~-~~a---~~~~~~~~~~~~~~l~~~h~~~-~~~~~~L~~~~~~-------- 326 (420)
++.++..+ .+.+-..++.|.....+|++ ++. -....++..+...+...-+..- .++..+|..+|..
T Consensus 17 sP~~Li~mLydgai~~l~~A~~ai~~~d~~~~k~~~~~~i~KA~~Ii~eL~~sLd~e~GgeiA~nL~~LY~y~~~~LAn~ 96 (130)
T 1orj_A 17 TPLEQIILLYDKAIECLERAIEIYDQVNELEKRKEFVENIDRVYDIISALKSFLDHEKGKEIAKNLDTIYTIILNTLVKV 96 (130)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTGGGTTSHHHHHHHHHHHHHHHHHHHHHHHTCCTTTSHHHHHHHHHHHHHHHHHHHCT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCcHHHHHHHHHHHHHHHHHhcc
Confidence 45555444 46666667778888888999 766 4444444443322211122221 1223333333322
Q ss_pred ---hhcHHHHHHHHHHhHHHHHHhcC
Q 014710 327 ---LEDWKEALAYCQLTIPVYQRVYP 349 (420)
Q Consensus 327 ---~g~~~~A~~~~~~~l~~~~~~~g 349 (420)
...++++..+...+.+.|+.+.+
T Consensus 97 ~~d~~~l~ev~~ll~~lreaW~~i~~ 122 (130)
T 1orj_A 97 DKTKEELQKILEILKDLREAWEEVKK 122 (130)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 14566677777777777766543
No 383
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=25.10 E-value=27 Score=30.87 Aligned_cols=25 Identities=32% Similarity=0.861 Sum_probs=20.5
Q ss_pred CccCccccCCCC------------CcCCCCCCccccc
Q 014710 27 ISRCDGCFASSN------------LKKCSACQVVWYC 51 (420)
Q Consensus 27 ~~~C~~C~~~~~------------~~~C~~C~~~~yC 51 (420)
...|.+|+-.+| .+.||.|+...|=
T Consensus 198 ~~~C~GC~~~lppq~~~~i~~~~~Iv~Cp~CgRIL~~ 234 (256)
T 3na7_A 198 KQACGGCFIRLNDKIYTEVLTSGDMITCPYCGRILYA 234 (256)
T ss_dssp TTBCTTTCCBCCHHHHHHHHHSSSCEECTTTCCEEEC
T ss_pred CCccCCCCeeeCHHHHHHHHCCCCEEECCCCCeeEEe
Confidence 679999999853 6899999977774
No 384
>1kbe_A Kinase suppressor of RAS; KSR, cysteine-rich domain, zinc- binding protein, signaling protein; NMR {Mus musculus} SCOP: g.49.1.1 PDB: 1kbf_A
Probab=25.09 E-value=17 Score=23.17 Aligned_cols=30 Identities=30% Similarity=0.637 Sum_probs=23.2
Q ss_pred CccCccccCC-CCCcCCCCCCcccccChhhchh
Q 014710 27 ISRCDGCFAS-SNLKKCSACQVVWYCGSNCQKL 58 (420)
Q Consensus 27 ~~~C~~C~~~-~~~~~C~~C~~~~yCs~~C~~~ 58 (420)
.+.|++|.+. .....|..|++. |=.+|+..
T Consensus 14 ~t~C~~C~k~i~~G~kC~~Ck~~--cH~kC~~~ 44 (49)
T 1kbe_A 14 SQVCNVCQKSMIFGVKCKHCRLK--CHNKCTKE 44 (49)
T ss_dssp SCCCSSSCCSSCCEEEETTTTEE--ESSSCTTT
T ss_pred CcCccccCceeECcCCCCCCCCc--cchhhcCc
Confidence 4889999888 345789999985 77777753
No 385
>3iz5_Z 60S ribosomal protein L24 (L24E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_Z
Probab=24.99 E-value=22 Score=28.77 Aligned_cols=32 Identities=16% Similarity=0.176 Sum_probs=24.9
Q ss_pred CccCccccCC-CC----CcCCCCCCcccccChhhchh
Q 014710 27 ISRCDGCFAS-SN----LKKCSACQVVWYCGSNCQKL 58 (420)
Q Consensus 27 ~~~C~~C~~~-~~----~~~C~~C~~~~yCs~~C~~~ 58 (420)
...|++|... .| .+.-.+++..+|||..|.+.
T Consensus 5 ~e~CsFcG~~IyPG~G~~fVr~Dgkvf~FcssKC~k~ 41 (162)
T 3iz5_Z 5 TELCRFSGQKIYPGKGIRFIRADSQVFLFANSKCKRY 41 (162)
T ss_dssp CEECTTTCSEECSSCSEEEECTTSCEEEECSHHHHHH
T ss_pred EEEecCcCCcccCCCCeEEEecCCCEEEEECHHHHHH
Confidence 4679999887 33 45557899999999999764
No 386
>4a17_T RPL24, 60S ribosomal protein L21; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_T 4a1c_T 4a1e_T
Probab=24.85 E-value=22 Score=28.70 Aligned_cols=32 Identities=9% Similarity=0.086 Sum_probs=25.1
Q ss_pred CccCccccCC-CC----CcCCCCCCcccccChhhchh
Q 014710 27 ISRCDGCFAS-SN----LKKCSACQVVWYCGSNCQKL 58 (420)
Q Consensus 27 ~~~C~~C~~~-~~----~~~C~~C~~~~yCs~~C~~~ 58 (420)
...|++|... .| .+.-.+++..+|||..|...
T Consensus 5 ~~~CsFcg~~IyPG~G~~fVr~Dgkvf~FcssKC~k~ 41 (158)
T 4a17_T 5 TGTCSFCEYRIYPGRGQRFIAKDGRGFFFLTKKAKCL 41 (158)
T ss_dssp CEECTTTCCEECTTCCEEEECTTSCEEEESCHHHHHH
T ss_pred EEEecCcCCcccCCCCeEEEeeCCceEEEEcHHHHHH
Confidence 4679999887 33 44556899999999999875
No 387
>3izc_m 60S ribosomal protein RPL43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_m 3o58_g 3o5h_g 3u5e_p 3u5i_p 4b6a_p 1s1i_9
Probab=24.78 E-value=21 Score=26.08 Aligned_cols=29 Identities=21% Similarity=0.456 Sum_probs=19.1
Q ss_pred CccccCCCCCCCcccCCCCCccccCCCCCcc
Q 014710 230 GYRCKDDGCSGFLLRDSDDKGFTCQQCGLVR 260 (420)
Q Consensus 230 ~~~C~c~~C~~~~~~~~~~~~~~C~~C~~~~ 260 (420)
.|.| +.|...-........|.|..|+...
T Consensus 36 ky~C--pfCgk~~vkR~a~GIW~C~~C~~~~ 64 (92)
T 3izc_m 36 RYDC--SFCGKKTVKRGAAGIWTCSCCKKTV 64 (92)
T ss_dssp CCCC--SSSCSSCCEEEETTEEECTTTCCEE
T ss_pred CCcC--CCCCCceeeecccceEEcCCCCCEE
Confidence 4666 6887543333345679999998653
No 388
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=24.75 E-value=1.8e+02 Score=20.34 Aligned_cols=34 Identities=15% Similarity=0.024 Sum_probs=24.9
Q ss_pred HHHHHHHHhhhhcCCChHHHHHHHHHHHHHhhhh
Q 014710 272 VNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKL 305 (420)
Q Consensus 272 ~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~ 305 (420)
...+...|......|++++|+.+|..++......
T Consensus 13 A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~l~~a 46 (85)
T 2v6x_A 13 GIELVQKAIDLDTATQYEEAYTAYYNGLDYLMLA 46 (85)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 3344555666667799999999999998865543
No 389
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=24.74 E-value=2.2e+02 Score=27.03 Aligned_cols=72 Identities=15% Similarity=0.091 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHh-cCCCChHHHHHHHHhhH
Q 014710 290 EVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRV-YPQFHPLLGLQYYTCGK 364 (420)
Q Consensus 290 ~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~-~g~~hp~~~~~l~~La~ 364 (420)
.++.+|.+++...+..+...|++-.- -++..+.+.+++.+|+.....+-++.+.+ |..+.-.+=..++++|.
T Consensus 297 ~~~~L~~~AI~sa~~~Y~n~HvYPYt---YlgGy~yR~~~~reAl~~WA~Aa~Vi~~YNY~reDeEIYKEf~eIAn 369 (550)
T 3u84_A 297 DPLTLYHKGIASAKTYYRDEHIYPYM---YLAGYHCRNRNVREALQAWADTATVIQDYNYCREDEEIYKEFFEVAN 369 (550)
T ss_dssp CHHHHHHHHHHHHHHHSTTCCSHHHH---HHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCGGGHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhccCCcccee---ecchhhhhcchHHHHHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHH
Confidence 46889999999888888888876443 35677888899999998877776665443 44555555445555443
No 390
>2yrc_A Protein transport protein SEC23A; zinc binding, copii, coat protein complex-II, endoplasmic reticulum, golgi, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yrd_A
Probab=24.65 E-value=27 Score=23.13 Aligned_cols=25 Identities=20% Similarity=0.272 Sum_probs=17.4
Q ss_pred CCC--CCCCcccCC----CCCccccCCCCCc
Q 014710 235 DDG--CSGFLLRDS----DDKGFTCQQCGLV 259 (420)
Q Consensus 235 c~~--C~~~~~~~~----~~~~~~C~~C~~~ 259 (420)
|.+ |...+.|-- ....|.|..|+..
T Consensus 12 C~r~~CraylNP~~~~~~~~~~W~C~~C~~~ 42 (59)
T 2yrc_A 12 CSRTTCRAVLNPLCQVDYRAKLWACNFCYQR 42 (59)
T ss_dssp CSCTTTCCBCCTTSEEEGGGTEEECSSSCCE
T ss_pred cCCCCCCeEECCceEEECCCCEEEcccCCCc
Confidence 346 988776542 2457999999864
No 391
>1wys_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=24.41 E-value=38 Score=23.66 Aligned_cols=41 Identities=15% Similarity=0.335 Sum_probs=28.6
Q ss_pred CCccCcc--ccCC-CCCcCCCCCCcccccChhhchhhhhhhHhhchhhhh
Q 014710 26 SISRCDG--CFAS-SNLKKCSACQVVWYCGSNCQKLDWKLHRLECQVLSR 72 (420)
Q Consensus 26 ~~~~C~~--C~~~-~~~~~C~~C~~~~yCs~~C~~~~~~~H~~EC~~~~~ 72 (420)
...+|.. |-+. .-++.|..|+.. ||++ -+ ......|+....
T Consensus 13 ~g~~Cs~~~C~~~dflpf~C~~C~~~-FC~~-HR----~~e~H~C~~~~~ 56 (75)
T 1wys_A 13 IGQHCQVQHCRQRDFLPFVCDGCSGI-FCLE-HR----SKDSHGCSEVNV 56 (75)
T ss_dssp CCCCCSCTTTCCCSCCCEECTTTCCE-ECST-TC----SSGGGTCCCCSS
T ss_pred cCCCcCcccCCCccceeeECcccCcC-cCcc-cC----CccccCCCCCcc
Confidence 5788998 9887 347889999996 9963 22 123467876644
No 392
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=23.90 E-value=1.5e+02 Score=21.53 Aligned_cols=35 Identities=11% Similarity=0.209 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHh
Q 014710 313 LMQTREKLIKILMELEDWKEALAYCQLTIPVYQRV 347 (420)
Q Consensus 313 ~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~ 347 (420)
........+..+...|.|++|++..+++...+..-
T Consensus 14 ~AH~~~RrAe~ll~~gkydeAIech~kAa~yL~eA 48 (97)
T 2crb_A 14 LAHQQSRRADRLLAAGKYEEAISCHRKATTYLSEA 48 (97)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred hhhHhhhHHHHHHhcCCHHHHHHHHHHHHHHHHHH
Confidence 44556778889999999999999999887654443
No 393
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=23.89 E-value=38 Score=23.29 Aligned_cols=26 Identities=15% Similarity=0.501 Sum_probs=19.1
Q ss_pred CCCccCccccCC-----CCCcCCCCCCc-ccc
Q 014710 25 SSISRCDGCFAS-----SNLKKCSACQV-VWY 50 (420)
Q Consensus 25 ~~~~~C~~C~~~-----~~~~~C~~C~~-~~y 50 (420)
...-.|..|... ...+.|+.|.. +.|
T Consensus 26 ~v~Y~C~~CG~~~e~~~~d~irCp~CG~RILy 57 (70)
T 1twf_L 26 TLKYICAECSSKLSLSRTDAVRCKDCGHRILL 57 (70)
T ss_dssp CCCEECSSSCCEECCCTTSTTCCSSSCCCCCB
T ss_pred eEEEECCCCCCcceeCCCCCccCCCCCceEeE
Confidence 356789999887 23689999986 444
No 394
>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus}
Probab=23.80 E-value=26 Score=23.58 Aligned_cols=32 Identities=28% Similarity=0.669 Sum_probs=25.3
Q ss_pred CCCccCccccCCC-C----CcCCCCCCcccccChhhchh
Q 014710 25 SSISRCDGCFASS-N----LKKCSACQVVWYCGSNCQKL 58 (420)
Q Consensus 25 ~~~~~C~~C~~~~-~----~~~C~~C~~~~yCs~~C~~~ 58 (420)
...+.|++|.+.+ . ...|..|++. |-+.|...
T Consensus 22 ~~pt~C~~C~~~l~Gl~~qg~~C~~C~~~--~Hk~C~~~ 58 (66)
T 1y8f_A 22 TTPTYCYECEGLLWGIARQGMRCTECGVK--CHEKCQDL 58 (66)
T ss_dssp SSCCCCTTTCCCCCSSCCEEEEETTTCCE--ECTTHHHH
T ss_pred CCCcChhhcChhhcccCcceeEcCCCCCe--eCHHHHhh
Confidence 4678999998873 2 4689999986 88888865
No 395
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=23.78 E-value=53 Score=22.07 Aligned_cols=23 Identities=26% Similarity=0.635 Sum_probs=18.2
Q ss_pred CCCccCccccCCC-----CCcCCCCCCc
Q 014710 25 SSISRCDGCFASS-----NLKKCSACQV 47 (420)
Q Consensus 25 ~~~~~C~~C~~~~-----~~~~C~~C~~ 47 (420)
...-.|..|.... ..++|+.|..
T Consensus 19 ~v~Y~C~~Cg~~~~l~~~~~iRC~~CG~ 46 (63)
T 3h0g_L 19 TMIYLCADCGARNTIQAKEVIRCRECGH 46 (63)
T ss_dssp CCCCBCSSSCCBCCCCSSSCCCCSSSCC
T ss_pred CeEEECCCCCCeeecCCCCceECCCCCc
Confidence 4678999998873 3789999975
No 396
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=23.48 E-value=1.5e+02 Score=28.26 Aligned_cols=35 Identities=20% Similarity=0.217 Sum_probs=28.1
Q ss_pred ChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHHH
Q 014710 310 SVNLMQTREKLIKILMELEDWKEALAYCQLTIPVY 344 (420)
Q Consensus 310 h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~ 344 (420)
++...-+..-++++|...|+|++|++++++++..-
T Consensus 186 r~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~~ 220 (454)
T 3myv_A 186 RMNKYAARALLARIYLYHDDNRKAFDLADQLIKDA 220 (454)
T ss_dssp SCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred eecHHHHHHHHHHHHHhcccHHHHHHHHHHHHhCC
Confidence 34444566678999999999999999999998753
No 397
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=23.42 E-value=1.3e+02 Score=21.62 Aligned_cols=32 Identities=16% Similarity=0.111 Sum_probs=28.1
Q ss_pred HHHHHHHHHHhhhhcCCChHHHHHHHHHHHHH
Q 014710 270 SEVNILSKKTLALTSCGNHQEVVSTYKMIEKL 301 (420)
Q Consensus 270 ~~~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~ 301 (420)
.+++.++.+|..+...+++.+|..+++++...
T Consensus 51 ~~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~ 82 (106)
T 2vkj_A 51 KKARSLIAEGKDLFETANYGEALVFFEKALNL 82 (106)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcchhHHHHHHHHHHcc
Confidence 56788888999999999999999999999765
No 398
>4a17_Y RPL37A, 60S ribosomal protein L32; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_Y 4a1c_Y 4a1e_Y
Probab=23.38 E-value=45 Score=24.76 Aligned_cols=28 Identities=18% Similarity=0.541 Sum_probs=18.5
Q ss_pred CccccCCCCCCCcccCCCCCccccCCCCCc
Q 014710 230 GYRCKDDGCSGFLLRDSDDKGFTCQQCGLV 259 (420)
Q Consensus 230 ~~~C~c~~C~~~~~~~~~~~~~~C~~C~~~ 259 (420)
.|.| +.|...-........|.|..|+..
T Consensus 36 ky~C--pfCgk~~vKR~a~GIW~C~kCg~~ 63 (103)
T 4a17_Y 36 KYGC--PFCGKVAVKRAAVGIWKCKPCKKI 63 (103)
T ss_dssp CEEC--TTTCCEEEEEEETTEEEETTTTEE
T ss_pred CCCC--CCCCCceeeecCcceEEcCCCCCE
Confidence 4666 688754333334567999999754
No 399
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=23.09 E-value=34 Score=22.70 Aligned_cols=28 Identities=32% Similarity=0.878 Sum_probs=21.4
Q ss_pred CccCccccCCCC---CcCCCCCCcccccChhhc
Q 014710 27 ISRCDGCFASSN---LKKCSACQVVWYCGSNCQ 56 (420)
Q Consensus 27 ~~~C~~C~~~~~---~~~C~~C~~~~yCs~~C~ 56 (420)
...|..|.+..+ ...|+.|+.. || -+|-
T Consensus 15 ~~~C~~C~~~~~~~~~y~C~~C~~~-FC-~dCD 45 (59)
T 1z60_A 15 ERFCYGCQGELKDQHVYVCAVCQNV-FC-VDCD 45 (59)
T ss_dssp CCEETTTTEECTTSEEECCTTTTCC-BC-HHHH
T ss_pred CCcccccCcccCCCccEECCccCcC-cc-cchh
Confidence 457999988853 3779999996 99 4564
No 400
>2a9u_A Ubiquitin carboxyl-terminal hydrolase 8; coil-COIL, protease, SH3-binding, thiol protease, UBL conjugation pathway, structural genomics; 2.10A {Homo sapiens} SCOP: a.118.23.1
Probab=22.61 E-value=2.9e+02 Score=21.83 Aligned_cols=73 Identities=15% Similarity=0.043 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHhHHHHHHhcCCCChHHHHHHHHhhHHHHhhcChHHHHHHHHHHHHHHHHhc
Q 014710 315 QTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITH 390 (420)
Q Consensus 315 ~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~~~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~A~~i~~~~~ 390 (420)
......|..|..-||.+.|.-++.+.+.++..+ +.||..-..--..-.+. .......+++-+++-...+...|
T Consensus 43 ~~L~r~A~~y~~EGd~E~AYilymRy~~L~~kI--pkHpdyk~~~~~~k~~l-~k~~~~~vl~~lE~LK~~L~~rY 115 (144)
T 2a9u_A 43 LKIFKTAEECRLDRDEERAYVLYMKYVTVYNLI--KKRPDFKQQQDYFHSIL-GPGNIKKAVEEAERLSESLKLRY 115 (144)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TTSHHHHHTHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH--hcCcchhhhhHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHH
Confidence 344555788999999999999999999988544 77887764331111110 01123345555555555555544
No 401
>3izc_Z 60S ribosomal protein RPL24 (L24E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_Z 3o58_V 3o5h_V 3u5e_W 3u5i_W 4b6a_W 1s1i_S 2x7n_D
Probab=22.58 E-value=27 Score=28.12 Aligned_cols=32 Identities=13% Similarity=-0.020 Sum_probs=24.7
Q ss_pred CccCccccCC-CC----CcCCCCCCcccccChhhchh
Q 014710 27 ISRCDGCFAS-SN----LKKCSACQVVWYCGSNCQKL 58 (420)
Q Consensus 27 ~~~C~~C~~~-~~----~~~C~~C~~~~yCs~~C~~~ 58 (420)
...|++|... .| .+.-.+++..+|||..|...
T Consensus 3 ~~~CsFcg~~IyPG~G~~fVr~Dgkvf~FcssKC~k~ 39 (155)
T 3izc_Z 3 VEIDSFSGAKIYPGRGTLFVRGDSKIFRFQNSKSASL 39 (155)
T ss_dssp CEECTTTCSEECTTCCEEEECTTCCEEEESSHHHHHH
T ss_pred eeEecCcCCcccCCCCeEEEecCCCEEEEEcHHHHHH
Confidence 3579999887 33 44556899899999999764
No 402
>1vq8_U 50S ribosomal protein L24E; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.39.1.6 PDB: 1giy_R 1jj2_T 1k73_V* 1k8a_V* 1k9m_V* 1kc8_V* 1kd1_V* 1kqs_T* 1m1k_V* 1m90_V* 1ml5_r* 1n8r_V* 1nji_V* 1q7y_V* 1q81_V* 1q82_V* 1q86_V* 1qvf_T 1qvg_T 1s72_U* ...
Probab=22.52 E-value=36 Score=23.17 Aligned_cols=32 Identities=19% Similarity=0.426 Sum_probs=23.2
Q ss_pred CccCccccCCC-C----CcCCCCCCcccccChhhchh
Q 014710 27 ISRCDGCFASS-N----LKKCSACQVVWYCGSNCQKL 58 (420)
Q Consensus 27 ~~~C~~C~~~~-~----~~~C~~C~~~~yCs~~C~~~ 58 (420)
...|++|.... | ...=.+.+...|||..|.+.
T Consensus 3 ~~~C~Fcg~~IyPG~G~~~Vr~Dgkvf~FcssKc~k~ 39 (66)
T 1vq8_U 3 TRECDYCGTDIEPGTGTMFVHKDGATTHFCSSKCENN 39 (66)
T ss_dssp -CBCTTTCCBCCSSCCEEEECTTSCEEEESCHHHHHH
T ss_pred eeEecCcCCcccCCCceEEEeeCCcEEEEECHHHHHH
Confidence 35799998873 2 23345788889999999975
No 403
>1x4v_A Hypothetical protein LOC130617; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.47 E-value=51 Score=22.13 Aligned_cols=26 Identities=19% Similarity=0.568 Sum_probs=20.7
Q ss_pred CCccCcc--ccCC-CCCcCCCCCCcccccC
Q 014710 26 SISRCDG--CFAS-SNLKKCSACQVVWYCG 52 (420)
Q Consensus 26 ~~~~C~~--C~~~-~~~~~C~~C~~~~yCs 52 (420)
....|.. |-+. ..++.|..|... ||+
T Consensus 11 ~~~~Cs~~~Ck~~~ll~f~C~~C~~~-FC~ 39 (63)
T 1x4v_A 11 FTNKCERAGCRQREMMKLTCERCSRN-FCI 39 (63)
T ss_dssp TCCCCCSTTCCCCCSSCCBCSSSCCB-CCH
T ss_pred cCCCCCccCCCCCCccceECCCCCcc-cCc
Confidence 4678888 9877 446899999996 995
No 404
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=22.38 E-value=1.7e+02 Score=27.98 Aligned_cols=34 Identities=21% Similarity=0.234 Sum_probs=27.6
Q ss_pred ChhHHHHHHHHHHHHHHhhcHHHHHHHHHHhHHH
Q 014710 310 SVNLMQTREKLIKILMELEDWKEALAYCQLTIPV 343 (420)
Q Consensus 310 h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~ 343 (420)
++...-+..-++++|...|+|++|++++++++..
T Consensus 192 r~tk~aa~allArvyL~~~~~~~A~~~a~~vi~~ 225 (461)
T 3kez_A 192 KVNRWAAMTLLSRVYLYKGEYNEALTMAENAIKG 225 (461)
T ss_dssp SCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred eeeHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 4444556667889999999999999999999874
No 405
>2das_A Zinc finger MYM-type protein 5; trash domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.17
Probab=22.30 E-value=41 Score=22.21 Aligned_cols=32 Identities=13% Similarity=0.396 Sum_probs=20.1
Q ss_pred CCccCccccCCC-CCcCC---CCCCcccccChhhchh
Q 014710 26 SISRCDGCFASS-NLKKC---SACQVVWYCGSNCQKL 58 (420)
Q Consensus 26 ~~~~C~~C~~~~-~~~~C---~~C~~~~yCs~~C~~~ 58 (420)
....|.+|-+.+ +...| .+... .|||..|...
T Consensus 19 ~~v~C~~CKk~lqKGQtAyqrkGs~~-LFCS~~CL~~ 54 (62)
T 2das_A 19 AKITCANCKKPLQKGQTAYQRKGSAH-LFCSTTCLSS 54 (62)
T ss_dssp SSCBCTTTCCBCCTTSCCEECTTCCC-EESSHHHHHH
T ss_pred cccChhhccchhhcCceeeeecCchh-heechHHHcc
Confidence 567888887763 22222 23333 4999999865
No 406
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=21.96 E-value=1.8e+02 Score=21.50 Aligned_cols=19 Identities=21% Similarity=0.426 Sum_probs=13.0
Q ss_pred ccccCCCCCccCHHHHHHH
Q 014710 250 GFTCQQCGLVRSKEEIKKI 268 (420)
Q Consensus 250 ~~~C~~C~~~~~~~~~~~~ 268 (420)
+-.||.||...+++.....
T Consensus 47 g~~CPvCgs~l~~~~~~~~ 65 (112)
T 1l8d_A 47 KGKCPVCGRELTDEHREEL 65 (112)
T ss_dssp SEECTTTCCEECHHHHHHH
T ss_pred CCCCCCCCCcCCHHHHHHH
Confidence 4469999988886544433
No 407
>1ffk_W Ribosomal protein L37AE; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1jj2_Y 1k73_1* 1k8a_1* 1k9m_1* 1kc8_1* 1kd1_1* 1kqs_Y* 1m1k_1* 1m90_1* 1n8r_1* 1nji_1* 1q7y_1* 1q81_1* 1q82_1* 1q86_1* 1qvf_Y 1qvg_Y 1w2b_Y 3cxc_Y*
Probab=21.95 E-value=23 Score=24.65 Aligned_cols=29 Identities=24% Similarity=0.582 Sum_probs=18.4
Q ss_pred CccccCCCCCCCcccCCCCCccccCCCCCcc
Q 014710 230 GYRCKDDGCSGFLLRDSDDKGFTCQQCGLVR 260 (420)
Q Consensus 230 ~~~C~c~~C~~~~~~~~~~~~~~C~~C~~~~ 260 (420)
.|.| +.|...-+.......|.|..|+...
T Consensus 27 ky~C--~fCgk~~vkR~a~GIW~C~~C~~~~ 55 (73)
T 1ffk_W 27 KYKC--PVCGFPKLKRASTSIWVCGHCGYKI 55 (73)
T ss_pred CccC--CCCCCceeEEEEeEEEECCCCCcEE
Confidence 3555 6887533333334579999999764
No 408
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=21.93 E-value=34 Score=21.37 Aligned_cols=12 Identities=25% Similarity=0.974 Sum_probs=9.6
Q ss_pred CccccCCCCCcc
Q 014710 249 KGFTCQQCGLVR 260 (420)
Q Consensus 249 ~~~~C~~C~~~~ 260 (420)
++|.|+.|+...
T Consensus 29 ~dw~CP~Cg~~k 40 (46)
T 6rxn_A 29 DDWCCPVCGVSK 40 (46)
T ss_dssp TTCBCTTTCCBG
T ss_pred CCCcCcCCCCcH
Confidence 469999999753
No 409
>2rkl_A Vacuolar protein sorting-associated protein VTA1; dimerization motif, cytoplasm, endosome, lipid transport, membrane, protein transport; 1.50A {Saccharomyces cerevisiae} PDB: 3mhv_A
Probab=21.59 E-value=1.7e+02 Score=18.82 Aligned_cols=25 Identities=20% Similarity=0.223 Sum_probs=19.5
Q ss_pred hHHHHhhcChHHHHHHHHHHHHHHH
Q 014710 363 GKLEWFLGDTENAIKSMTEAVEILR 387 (420)
Q Consensus 363 a~~~~~~g~~~eA~~~l~~A~~i~~ 387 (420)
|...+.-.+...|++.|++|++++.
T Consensus 27 AiSAL~feDv~tA~~~L~~AL~lL~ 51 (53)
T 2rkl_A 27 AISALNYEDLPTAKDELTKALDLLN 51 (53)
T ss_dssp HHHHHTTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHcccccHHHHHHHHHHHHHHHh
Confidence 3444466888899999999999886
No 410
>3u50_C Telomerase-associated protein 82; TEB1, processivity factor, DNA BIND protein; 2.50A {Tetrahymena thermophila}
Probab=21.01 E-value=29 Score=28.70 Aligned_cols=26 Identities=15% Similarity=0.339 Sum_probs=18.2
Q ss_pred ccCCCCCCCcccCCCCCccccCCCCCc
Q 014710 233 CKDDGCSGFLLRDSDDKGFTCQQCGLV 259 (420)
Q Consensus 233 C~c~~C~~~~~~~~~~~~~~C~~C~~~ 259 (420)
-.|+.|...+.. ..+..|.|.+|+..
T Consensus 43 ~ACp~CnKKV~~-~~~g~~~CekC~~~ 68 (172)
T 3u50_C 43 YRCTCQGKSVLK-YHGDSFFCESCQQF 68 (172)
T ss_dssp EECTTSCCCEEE-ETTTEEEETTTTEE
T ss_pred hhchhhCCEeee-CCCCeEECCCCCCC
Confidence 346779876652 33457999999875
No 411
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=20.89 E-value=2.6e+02 Score=22.34 Aligned_cols=50 Identities=10% Similarity=0.005 Sum_probs=32.2
Q ss_pred hcCCChHHHHHHHHHHHHHhhhhcCCCChhHHHHHHHHHHHHHHhhcHHHHHHHHHHh
Q 014710 283 TSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLT 340 (420)
Q Consensus 283 ~~~g~~~~a~~~~~~~~~~~~~~l~~~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~ 340 (420)
..+|+-++.-+++..+ ++ +++.-...+..++.+|.+.|+..+|-++..++
T Consensus 102 v~~~KkDqLdki~~~~-------l~-n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~A 151 (172)
T 1wy6_A 102 VIQGKRDKLEEIGREI-------LK-NNEVSASILVAIANALRRVGDERDATTLLIEA 151 (172)
T ss_dssp HHTTCHHHHHHHHHHH-------C---CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHhccHhHHHHHHHHH-------hc-cCCCChHHHHHHHHHHHHhcchhhHHHHHHHH
Confidence 3456655544444332 33 44444566778999999999999998877665
No 412
>1jjd_A Metallothionein, SMTA; zinc finger, zinc cluster, metal binding PR; NMR {Synechococcus elongatus} SCOP: g.46.1.1
Probab=20.79 E-value=45 Score=21.73 Aligned_cols=11 Identities=27% Similarity=0.954 Sum_probs=9.0
Q ss_pred cccChhhchhh
Q 014710 49 WYCGSNCQKLD 59 (420)
Q Consensus 49 ~yCs~~C~~~~ 59 (420)
+|||++|.+.+
T Consensus 29 ~YCSe~Ca~gH 39 (55)
T 1jjd_A 29 YYCSEACADGH 39 (55)
T ss_dssp EESSHHHHHTS
T ss_pred EEehHHHHccC
Confidence 59999999753
No 413
>2csz_A Synaptotagmin-like protein 4; exophilin 2, granuphilin, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.65 E-value=50 Score=23.13 Aligned_cols=33 Identities=24% Similarity=0.587 Sum_probs=25.2
Q ss_pred CCCCccCccccCCCC-----CcCCCCCCcccccChhhchh
Q 014710 24 SSSISRCDGCFASSN-----LKKCSACQVVWYCGSNCQKL 58 (420)
Q Consensus 24 ~~~~~~C~~C~~~~~-----~~~C~~C~~~~yCs~~C~~~ 58 (420)
......|..|.+.+. ..+|++|+. ..| .+|+..
T Consensus 22 ~~~~r~CarC~~~LG~l~~~g~~C~~Ck~-rVC-~~Crv~ 59 (76)
T 2csz_A 22 HYSDRTCARCQESLGRLSPKTNTCRGCNH-LVC-RDCRIQ 59 (76)
T ss_dssp TCCCCBCSSSCCBCSSSCTTTSEETTTTE-ECC-TTSEEE
T ss_pred CCCccchhhhCccccccccCCCcCcccCh-hhc-cccccc
Confidence 456899999999853 578999998 478 457743
No 414
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=20.56 E-value=1.1e+02 Score=22.32 Aligned_cols=33 Identities=18% Similarity=0.233 Sum_probs=19.7
Q ss_pred HHHHHHHHhhcHHHHHHHHHH----------hHHHHHHhcCCC
Q 014710 319 KLIKILMELEDWKEALAYCQL----------TIPVYQRVYPQF 351 (420)
Q Consensus 319 ~L~~~~~~~g~~~~A~~~~~~----------~l~~~~~~~g~~ 351 (420)
.++..+...|+++.|+.++-+ +|.+|++.+|+.
T Consensus 25 ~lGE~L~~~g~~e~av~Hf~nAl~Vc~qP~~LL~i~q~TlP~~ 67 (95)
T 1om2_A 25 QLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVLQQTLPPP 67 (95)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHSCHHHHHHHHHHHSCCH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHHHHHHhhCCHH
Confidence 355666666777766664444 445566666653
No 415
>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1
Probab=20.29 E-value=43 Score=25.81 Aligned_cols=39 Identities=21% Similarity=0.551 Sum_probs=22.3
Q ss_pred eeccCCCCCCccCccccCCCC----CcCCCCCCcccccChhhchh
Q 014710 18 VCVPNNSSSISRCDGCFASSN----LKKCSACQVVWYCGSNCQKL 58 (420)
Q Consensus 18 ~~~~~~~~~~~~C~~C~~~~~----~~~C~~C~~~~yCs~~C~~~ 58 (420)
.+.+.+......|..|...-+ ..-|..|+.+ ||+. |-..
T Consensus 10 ~~~~~Pd~~~~~C~~C~~~Fs~~~RkHHCR~CG~i-fC~~-Cs~~ 52 (120)
T 1y02_A 10 SSFPSPTGLEPSCKSCGAHFANTARKQTCLDCKKN-FCMT-CSSQ 52 (120)
T ss_dssp ----------CCCTTTCCCCSSGGGCEECTTTCCE-ECGG-GEEC
T ss_pred ccCCcCccccCcccCcCCccccccccccCCCCCCe-eCHH-HhCC
Confidence 333444455789999988732 4679999997 9964 6644
Done!