Query 014711
Match_columns 420
No_of_seqs 376 out of 3501
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 16:27:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014711.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014711hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 16pk_A PGK, 3-phosphoglycerate 100.0 2.6E-65 8.9E-70 505.3 13.6 211 2-214 200-414 (415)
2 1vpe_A Phosphoglycerate kinase 100.0 3E-65 1E-69 503.3 13.4 210 2-214 181-395 (398)
3 3oz7_A Phosphoglycerate kinase 100.0 6.9E-65 2.4E-69 503.4 15.0 210 2-214 202-417 (417)
4 1v6s_A Phosphoglycerate kinase 100.0 7.6E-65 2.6E-69 499.3 14.8 208 1-213 178-389 (390)
5 1fw8_A PGK P72, phosphoglycera 100.0 5E-65 1.7E-69 504.3 12.7 212 2-216 128-345 (416)
6 1qpg_A PGK, 3-phosphoglycerate 100.0 5.3E-65 1.8E-69 504.0 12.7 210 2-214 198-413 (415)
7 3q3v_A Phosphoglycerate kinase 100.0 6.6E-65 2.3E-69 500.8 13.3 208 2-215 189-400 (403)
8 1php_A 3-phosphoglycerate kina 100.0 1E-64 3.4E-69 499.0 12.8 208 2-214 182-393 (394)
9 4fey_A Phosphoglycerate kinase 100.0 8.4E-65 2.9E-69 498.9 12.1 208 2-215 181-392 (395)
10 2wzb_A Phosphoglycerate kinase 100.0 6.5E-65 2.2E-69 503.4 10.0 210 2-214 200-415 (416)
11 1zmr_A Phosphoglycerate kinase 100.0 5.4E-63 1.9E-67 484.9 10.0 202 2-214 178-383 (387)
12 2cun_A Phosphoglycerate kinase 100.0 6.3E-61 2.1E-65 474.2 9.3 200 2-215 185-401 (410)
13 3dxy_A TRNA (guanine-N(7)-)-me 100.0 1.1E-32 3.6E-37 257.6 17.2 187 219-417 24-210 (218)
14 2fca_A TRNA (guanine-N(7)-)-me 100.0 4E-32 1.4E-36 252.3 19.9 186 219-417 28-213 (213)
15 3ckk_A TRNA (guanine-N(7)-)-me 100.0 3.9E-30 1.3E-34 242.9 20.8 180 230-418 46-231 (235)
16 1yzh_A TRNA (guanine-N(7)-)-me 100.0 8.6E-30 3E-34 235.9 22.0 184 219-415 31-214 (214)
17 2vdv_E TRNA (guanine-N(7)-)-me 100.0 6E-28 2.1E-32 228.7 15.9 190 220-418 30-236 (246)
18 3p2e_A 16S rRNA methylase; met 99.7 1.2E-16 4.1E-21 149.4 9.6 115 224-346 19-137 (225)
19 1yb2_A Hypothetical protein TA 99.7 1.3E-15 4.4E-20 146.2 16.3 159 230-418 110-270 (275)
20 1o54_A SAM-dependent O-methylt 99.6 2.2E-15 7.5E-20 144.5 15.7 158 230-417 112-271 (277)
21 3e05_A Precorrin-6Y C5,15-meth 99.6 6.6E-15 2.3E-19 134.4 18.2 121 230-366 40-160 (204)
22 3mb5_A SAM-dependent methyltra 99.6 2.5E-15 8.6E-20 141.8 15.0 123 230-371 93-219 (255)
23 4gek_A TRNA (CMO5U34)-methyltr 99.6 3.9E-16 1.3E-20 149.2 9.4 128 203-347 47-177 (261)
24 3hm2_A Precorrin-6Y C5,15-meth 99.6 8.2E-15 2.8E-19 130.0 15.5 124 230-370 25-149 (178)
25 2b3t_A Protein methyltransfera 99.6 8.8E-15 3E-19 140.3 15.8 138 230-374 109-263 (276)
26 1xdz_A Methyltransferase GIDB; 99.6 1.2E-14 4.1E-19 136.4 15.9 127 230-370 70-198 (240)
27 3njr_A Precorrin-6Y methylase; 99.6 2.1E-14 7.3E-19 131.8 17.2 122 230-371 55-177 (204)
28 3g89_A Ribosomal RNA small sub 99.6 1E-14 3.6E-19 138.2 15.0 127 230-370 80-208 (249)
29 2pwy_A TRNA (adenine-N(1)-)-me 99.6 1.2E-14 4.2E-19 136.9 15.1 159 230-417 96-256 (258)
30 3orh_A Guanidinoacetate N-meth 99.6 6.6E-15 2.3E-19 138.3 12.0 133 230-370 60-206 (236)
31 3mti_A RRNA methylase; SAM-dep 99.6 5.4E-14 1.9E-18 126.0 16.4 113 230-348 22-135 (185)
32 3mq2_A 16S rRNA methyltransfer 99.6 1.3E-14 4.5E-19 133.6 12.5 132 230-371 27-181 (218)
33 1i9g_A Hypothetical protein RV 99.6 4.6E-14 1.6E-18 134.9 15.8 124 230-371 99-227 (280)
34 3grz_A L11 mtase, ribosomal pr 99.6 1.7E-14 5.7E-19 131.7 11.6 123 230-371 60-182 (205)
35 3eey_A Putative rRNA methylase 99.6 6.3E-14 2.1E-18 126.9 15.3 115 230-348 22-139 (197)
36 3dh0_A SAM dependent methyltra 99.6 2.9E-14 9.9E-19 131.0 13.0 129 230-371 37-178 (219)
37 3evz_A Methyltransferase; NYSG 99.6 6.1E-14 2.1E-18 130.1 15.3 133 230-370 55-202 (230)
38 3dlc_A Putative S-adenosyl-L-m 99.5 4.4E-14 1.5E-18 129.0 13.6 103 232-348 45-148 (219)
39 3mgg_A Methyltransferase; NYSG 99.5 4.9E-14 1.7E-18 134.3 14.3 106 230-348 37-142 (276)
40 3dtn_A Putative methyltransfer 99.5 5.6E-14 1.9E-18 130.5 14.1 165 230-416 44-216 (234)
41 3lpm_A Putative methyltransfer 99.5 7.2E-14 2.5E-18 132.7 15.2 133 231-370 50-197 (259)
42 4df3_A Fibrillarin-like rRNA/T 99.5 1.9E-13 6.5E-18 128.2 17.5 128 230-371 77-214 (233)
43 3g5l_A Putative S-adenosylmeth 99.5 5.8E-14 2E-18 132.1 14.0 103 230-349 44-146 (253)
44 4dzr_A Protein-(glutamine-N5) 99.5 3.2E-15 1.1E-19 136.2 5.0 140 230-374 30-192 (215)
45 3f4k_A Putative methyltransfer 99.5 1E-13 3.6E-18 130.4 15.3 127 230-371 46-193 (257)
46 2yxd_A Probable cobalt-precorr 99.5 2.7E-13 9.3E-18 120.2 16.7 119 230-370 35-153 (183)
47 1nkv_A Hypothetical protein YJ 99.5 4.8E-14 1.6E-18 132.7 12.4 127 230-371 36-184 (256)
48 1dus_A MJ0882; hypothetical pr 99.5 8.8E-14 3E-18 124.4 13.4 120 230-364 52-173 (194)
49 2yvl_A TRMI protein, hypotheti 99.5 5.6E-14 1.9E-18 131.5 12.6 156 230-417 91-247 (248)
50 2ipx_A RRNA 2'-O-methyltransfe 99.5 1.5E-13 5.1E-18 128.1 15.1 126 230-370 77-213 (233)
51 1fbn_A MJ fibrillarin homologu 99.5 1.7E-13 5.9E-18 127.7 15.1 126 230-370 74-209 (230)
52 2ozv_A Hypothetical protein AT 99.5 8E-14 2.7E-18 132.8 12.9 132 230-364 36-185 (260)
53 3p9n_A Possible methyltransfer 99.5 1.1E-13 3.8E-18 124.8 13.2 109 230-349 44-154 (189)
54 2b25_A Hypothetical protein; s 99.5 1.1E-13 3.7E-18 136.5 14.2 120 230-365 105-236 (336)
55 2frn_A Hypothetical protein PH 99.5 4.9E-14 1.7E-18 135.7 11.5 122 230-370 125-253 (278)
56 3fpf_A Mtnas, putative unchara 99.5 1.3E-13 4.4E-18 133.4 14.4 101 230-348 122-222 (298)
57 1l3i_A Precorrin-6Y methyltran 99.5 6.4E-13 2.2E-17 118.5 17.9 121 230-368 33-154 (192)
58 3jwh_A HEN1; methyltransferase 99.5 9.8E-14 3.4E-18 127.6 12.8 107 230-347 29-140 (217)
59 1vl5_A Unknown conserved prote 99.5 7.4E-14 2.5E-18 132.0 12.3 103 230-347 37-139 (260)
60 1nt2_A Fibrillarin-like PRE-rR 99.5 4.1E-13 1.4E-17 123.9 16.8 105 230-348 57-161 (210)
61 3ntv_A MW1564 protein; rossman 99.5 1.9E-13 6.6E-18 127.7 14.3 103 230-346 71-174 (232)
62 3jwg_A HEN1, methyltransferase 99.5 1.4E-13 4.8E-18 126.7 13.1 107 230-347 29-140 (219)
63 3dr5_A Putative O-methyltransf 99.5 1.7E-13 5.9E-18 127.5 13.3 102 231-346 57-161 (221)
64 3bwc_A Spermidine synthase; SA 99.5 3.2E-13 1.1E-17 131.7 15.7 135 230-371 95-237 (304)
65 3g07_A 7SK snRNA methylphospha 99.5 6.6E-14 2.3E-18 135.5 10.7 117 230-349 46-221 (292)
66 4htf_A S-adenosylmethionine-de 99.5 4E-13 1.4E-17 128.8 16.1 106 230-349 68-174 (285)
67 1jsx_A Glucose-inhibited divis 99.5 1.1E-13 3.8E-18 126.1 11.5 118 231-369 66-183 (207)
68 3duw_A OMT, O-methyltransferas 99.5 2.2E-13 7.6E-18 125.8 13.6 107 230-347 58-166 (223)
69 3h2b_A SAM-dependent methyltra 99.5 2.2E-13 7.6E-18 123.7 13.1 123 231-371 42-179 (203)
70 1zx0_A Guanidinoacetate N-meth 99.5 1.6E-13 5.6E-18 128.1 12.5 129 230-368 60-204 (236)
71 3l8d_A Methyltransferase; stru 99.5 1.7E-13 5.7E-18 127.7 12.3 124 230-371 53-197 (242)
72 3tma_A Methyltransferase; thum 99.5 3.1E-13 1.1E-17 134.3 14.9 121 230-355 203-324 (354)
73 1pjz_A Thiopurine S-methyltran 99.5 3.3E-14 1.1E-18 130.2 7.1 106 230-348 22-140 (203)
74 3tfw_A Putative O-methyltransf 99.5 2.5E-13 8.7E-18 128.3 13.4 105 230-347 63-169 (248)
75 2ex4_A Adrenal gland protein A 99.5 1.5E-13 5.3E-18 128.5 11.7 130 230-371 79-222 (241)
76 2nxc_A L11 mtase, ribosomal pr 99.5 2.7E-13 9.2E-18 128.7 13.5 122 230-371 120-241 (254)
77 1ws6_A Methyltransferase; stru 99.5 2.9E-13 9.8E-18 119.0 12.5 107 230-350 41-149 (171)
78 4dcm_A Ribosomal RNA large sub 99.5 3.5E-13 1.2E-17 135.3 14.7 124 230-362 222-349 (375)
79 2r3s_A Uncharacterized protein 99.5 2.8E-14 9.7E-19 139.9 6.5 213 115-347 38-270 (335)
80 3ujc_A Phosphoethanolamine N-m 99.5 1.9E-13 6.4E-18 128.9 11.7 128 230-371 55-203 (266)
81 4fsd_A Arsenic methyltransfera 99.5 2.3E-13 7.7E-18 136.9 13.0 134 230-371 83-248 (383)
82 3kkz_A Uncharacterized protein 99.5 2.9E-13 1E-17 128.5 12.9 127 230-371 46-193 (267)
83 3vc1_A Geranyl diphosphate 2-C 99.5 3.6E-13 1.2E-17 131.3 13.7 127 230-371 117-266 (312)
84 1xxl_A YCGJ protein; structura 99.5 1.8E-13 6E-18 128.2 11.0 103 230-347 21-123 (239)
85 2xvm_A Tellurite resistance pr 99.5 4.9E-13 1.7E-17 120.5 13.4 105 230-348 32-136 (199)
86 3ocj_A Putative exported prote 99.5 1.8E-13 6E-18 133.0 11.1 108 230-348 118-227 (305)
87 1inl_A Spermidine synthase; be 99.5 5.4E-13 1.9E-17 129.6 14.5 128 230-364 90-225 (296)
88 1xj5_A Spermidine synthase 1; 99.5 4.6E-13 1.6E-17 132.3 14.1 114 230-350 120-237 (334)
89 2pt6_A Spermidine synthase; tr 99.5 6.9E-13 2.4E-17 130.4 15.3 127 230-364 116-250 (321)
90 1nv8_A HEMK protein; class I a 99.5 2.1E-13 7.1E-18 131.8 11.1 123 231-364 124-264 (284)
91 2p7i_A Hypothetical protein; p 99.5 2.6E-13 8.9E-18 126.2 11.4 100 230-349 42-142 (250)
92 3adn_A Spermidine synthase; am 99.5 2.7E-13 9.1E-18 131.7 11.8 127 230-364 83-218 (294)
93 3tr6_A O-methyltransferase; ce 99.5 6E-13 2.1E-17 122.9 13.7 106 231-347 65-173 (225)
94 3kr9_A SAM-dependent methyltra 99.5 4.9E-13 1.7E-17 124.7 13.1 123 230-370 15-139 (225)
95 3a27_A TYW2, uncharacterized p 99.5 3.3E-13 1.1E-17 129.5 12.2 117 230-364 119-240 (272)
96 3hem_A Cyclopropane-fatty-acyl 99.5 6.7E-13 2.3E-17 128.5 14.3 106 230-348 72-183 (302)
97 3gu3_A Methyltransferase; alph 99.4 4.1E-13 1.4E-17 129.1 12.6 104 230-348 22-126 (284)
98 2ift_A Putative methylase HI07 99.4 3.7E-13 1.3E-17 123.0 11.4 107 231-350 54-165 (201)
99 2gb4_A Thiopurine S-methyltran 99.4 3.9E-13 1.3E-17 127.7 11.7 107 230-348 68-191 (252)
100 3g5t_A Trans-aconitate 3-methy 99.4 6.1E-13 2.1E-17 128.7 13.3 103 230-346 36-147 (299)
101 2fhp_A Methylase, putative; al 99.4 5.3E-13 1.8E-17 119.2 11.8 110 230-350 44-156 (187)
102 2h00_A Methyltransferase 10 do 99.4 1.4E-12 4.7E-17 123.1 15.2 81 230-310 65-147 (254)
103 1uir_A Polyamine aminopropyltr 99.4 1.4E-12 4.8E-17 127.8 15.4 130 230-364 77-216 (314)
104 2esr_A Methyltransferase; stru 99.4 6.1E-13 2.1E-17 118.2 11.8 107 230-350 31-140 (177)
105 3bus_A REBM, methyltransferase 99.4 1.1E-12 3.8E-17 124.5 14.3 105 230-348 61-166 (273)
106 3gjy_A Spermidine synthase; AP 99.4 6.9E-13 2.3E-17 129.7 12.8 126 232-364 91-219 (317)
107 1xtp_A LMAJ004091AAA; SGPP, st 99.4 6.6E-13 2.2E-17 124.5 12.2 128 230-371 93-235 (254)
108 1iy9_A Spermidine synthase; ro 99.4 1.7E-12 5.7E-17 124.9 15.2 127 230-364 75-209 (275)
109 2fpo_A Methylase YHHF; structu 99.4 8.8E-13 3E-17 120.6 12.6 106 231-350 55-162 (202)
110 1kpg_A CFA synthase;, cyclopro 99.4 3.4E-12 1.2E-16 122.3 17.3 104 230-348 64-168 (287)
111 3hnr_A Probable methyltransfer 99.4 4.8E-13 1.7E-17 122.9 10.7 150 230-410 45-197 (220)
112 2i7c_A Spermidine synthase; tr 99.4 1.2E-12 4E-17 126.4 13.9 127 230-364 78-212 (283)
113 4hg2_A Methyltransferase type 99.4 2.5E-13 8.4E-18 129.5 8.8 97 230-348 39-135 (257)
114 3sm3_A SAM-dependent methyltra 99.4 1E-12 3.5E-17 121.3 12.7 107 230-348 30-141 (235)
115 1mjf_A Spermidine synthase; sp 99.4 1.9E-12 6.4E-17 124.8 14.8 124 230-364 75-213 (281)
116 2o07_A Spermidine synthase; st 99.4 1.5E-12 5.2E-17 127.0 14.3 126 230-363 95-228 (304)
117 2o57_A Putative sarcosine dime 99.4 1.1E-12 3.7E-17 126.4 13.1 128 230-371 82-231 (297)
118 3g2m_A PCZA361.24; SAM-depende 99.4 5.8E-13 2E-17 128.8 11.2 110 231-353 83-195 (299)
119 3c3p_A Methyltransferase; NP_9 99.4 1.6E-12 5.5E-17 119.0 13.5 101 231-347 57-159 (210)
120 1ve3_A Hypothetical protein PH 99.4 1E-12 3.5E-17 121.0 12.0 105 231-349 39-143 (227)
121 3lcc_A Putative methyl chlorid 99.4 6.5E-13 2.2E-17 123.6 10.8 128 231-372 67-205 (235)
122 3u81_A Catechol O-methyltransf 99.4 1.5E-12 5.1E-17 120.4 13.2 128 230-366 58-188 (221)
123 3lec_A NADB-rossmann superfami 99.4 1.5E-12 5.3E-17 121.6 13.2 124 230-370 21-145 (230)
124 1sui_A Caffeoyl-COA O-methyltr 99.4 1.7E-12 5.9E-17 122.7 13.6 107 230-347 79-189 (247)
125 1ixk_A Methyltransferase; open 99.4 1.8E-12 6.3E-17 126.9 14.2 134 230-368 118-269 (315)
126 1ri5_A MRNA capping enzyme; me 99.4 1.9E-12 6.5E-17 124.2 14.0 113 230-351 64-177 (298)
127 2p35_A Trans-aconitate 2-methy 99.4 8.1E-13 2.8E-17 124.3 11.0 100 230-348 33-132 (259)
128 2yqz_A Hypothetical protein TT 99.4 1.8E-12 6E-17 122.1 13.1 102 230-347 39-140 (263)
129 3id6_C Fibrillarin-like rRNA/T 99.4 3.8E-12 1.3E-16 119.3 15.2 126 230-370 76-212 (232)
130 2vdw_A Vaccinia virus capping 99.4 1.5E-12 5.2E-17 126.8 13.0 113 230-352 48-173 (302)
131 3r3h_A O-methyltransferase, SA 99.4 4.3E-13 1.5E-17 126.5 8.8 107 230-347 60-169 (242)
132 2gpy_A O-methyltransferase; st 99.4 2.1E-12 7E-17 120.3 13.3 105 230-347 54-159 (233)
133 3bkw_A MLL3908 protein, S-aden 99.4 3.5E-12 1.2E-16 118.6 14.6 104 230-350 43-146 (243)
134 1y8c_A S-adenosylmethionine-de 99.4 1.9E-12 6.4E-17 120.4 12.7 108 230-351 37-145 (246)
135 2b2c_A Spermidine synthase; be 99.4 1.2E-12 4.2E-17 128.2 11.8 127 230-364 108-242 (314)
136 3m33_A Uncharacterized protein 99.4 6.7E-13 2.3E-17 123.2 9.5 116 230-371 48-164 (226)
137 3ccf_A Cyclopropane-fatty-acyl 99.4 2.4E-12 8.3E-17 123.1 13.6 148 230-412 57-208 (279)
138 3q87_B N6 adenine specific DNA 99.4 1.7E-12 5.8E-17 115.4 11.6 126 230-374 23-149 (170)
139 3ajd_A Putative methyltransfer 99.4 2.4E-12 8.4E-17 123.4 13.4 117 230-349 83-212 (274)
140 1g8a_A Fibrillarin-like PRE-rR 99.4 3.1E-12 1.1E-16 118.5 13.6 105 230-348 73-178 (227)
141 3c3y_A Pfomt, O-methyltransfer 99.4 3.3E-12 1.1E-16 119.8 13.8 107 230-347 70-180 (237)
142 3e23_A Uncharacterized protein 99.4 1.2E-12 4E-17 119.8 10.3 122 230-371 43-179 (211)
143 1wxx_A TT1595, hypothetical pr 99.4 7E-12 2.4E-16 125.9 16.9 134 231-368 210-350 (382)
144 1wy7_A Hypothetical protein PH 99.4 1.3E-11 4.5E-16 112.3 17.2 123 230-370 49-171 (207)
145 3gnl_A Uncharacterized protein 99.4 3.1E-12 1.1E-16 120.5 13.3 123 230-369 21-144 (244)
146 3m70_A Tellurite resistance pr 99.4 2.6E-12 8.9E-17 123.2 13.0 104 230-348 120-223 (286)
147 3lbf_A Protein-L-isoaspartate 99.4 1.6E-12 5.4E-17 118.8 11.0 100 230-350 77-176 (210)
148 2pxx_A Uncharacterized protein 99.4 3.7E-12 1.3E-16 115.9 13.4 112 230-351 42-162 (215)
149 3dli_A Methyltransferase; PSI- 99.4 1.9E-12 6.4E-17 121.0 11.2 123 230-371 41-181 (240)
150 3ofk_A Nodulation protein S; N 99.4 1.7E-12 6E-17 118.9 10.7 106 230-350 51-156 (216)
151 2avd_A Catechol-O-methyltransf 99.4 4.4E-12 1.5E-16 117.4 13.3 106 230-347 69-178 (229)
152 2hnk_A SAM-dependent O-methylt 99.4 5.1E-12 1.7E-16 118.2 13.4 108 230-348 60-181 (239)
153 1wzn_A SAM-dependent methyltra 99.4 3.6E-12 1.2E-16 119.6 12.4 106 230-349 41-146 (252)
154 3cgg_A SAM-dependent methyltra 99.4 4.9E-12 1.7E-16 113.0 12.6 125 230-371 46-172 (195)
155 3ou2_A SAM-dependent methyltra 99.4 2.7E-12 9.1E-17 117.3 11.0 102 230-349 46-147 (218)
156 2fk8_A Methoxy mycolic acid sy 99.4 5.9E-12 2E-16 122.6 14.0 104 230-348 90-194 (318)
157 2p8j_A S-adenosylmethionine-de 99.4 2.1E-12 7.3E-17 117.4 10.0 106 230-348 23-128 (209)
158 3cbg_A O-methyltransferase; cy 99.4 6.2E-12 2.1E-16 117.5 13.4 106 230-347 72-181 (232)
159 2kw5_A SLR1183 protein; struct 99.4 7E-12 2.4E-16 113.6 13.3 100 233-348 32-131 (202)
160 3e8s_A Putative SAM dependent 99.3 7.4E-12 2.5E-16 114.7 13.4 102 230-349 52-153 (227)
161 2yxe_A Protein-L-isoaspartate 99.3 3.7E-12 1.3E-16 116.7 11.0 102 230-350 77-179 (215)
162 1o9g_A RRNA methyltransferase; 99.3 7.7E-13 2.6E-17 124.7 6.1 115 230-347 51-213 (250)
163 3thr_A Glycine N-methyltransfe 99.3 3.3E-12 1.1E-16 122.7 10.2 119 230-353 57-180 (293)
164 2aot_A HMT, histamine N-methyl 99.3 7.8E-12 2.7E-16 120.6 12.3 110 231-348 53-172 (292)
165 3c0k_A UPF0064 protein YCCW; P 99.3 2.3E-11 7.7E-16 122.8 16.2 135 230-368 220-364 (396)
166 2igt_A SAM dependent methyltra 99.3 1.3E-11 4.6E-16 121.7 14.1 113 231-348 154-272 (332)
167 3tm4_A TRNA (guanine N2-)-meth 99.3 2E-11 6.8E-16 122.3 15.6 128 230-369 217-347 (373)
168 3ggd_A SAM-dependent methyltra 99.3 9.1E-12 3.1E-16 116.4 12.3 107 230-348 56-163 (245)
169 2b78_A Hypothetical protein SM 99.3 2.1E-11 7.2E-16 122.7 15.7 134 230-367 212-355 (385)
170 3m4x_A NOL1/NOP2/SUN family pr 99.3 1.5E-11 5.1E-16 126.1 14.8 132 230-367 105-256 (456)
171 2as0_A Hypothetical protein PH 99.3 3E-11 1E-15 121.9 16.8 133 230-366 217-358 (396)
172 3fzg_A 16S rRNA methylase; met 99.3 6E-12 2E-16 113.8 10.4 101 230-346 49-150 (200)
173 2pbf_A Protein-L-isoaspartate 99.3 5.6E-12 1.9E-16 116.6 10.6 105 230-349 80-194 (227)
174 3d2l_A SAM-dependent methyltra 99.3 9.1E-12 3.1E-16 115.8 12.0 108 231-353 34-142 (243)
175 1qzz_A RDMB, aclacinomycin-10- 99.3 1.4E-11 4.9E-16 122.7 14.2 105 230-348 182-287 (374)
176 3pfg_A N-methyltransferase; N, 99.3 4.4E-12 1.5E-16 119.9 10.0 100 230-347 50-150 (263)
177 1i1n_A Protein-L-isoaspartate 99.3 5.9E-12 2E-16 116.4 10.3 101 230-349 77-183 (226)
178 3i53_A O-methyltransferase; CO 99.3 1.8E-11 6E-16 120.3 14.2 105 230-348 169-274 (332)
179 3i9f_A Putative type 11 methyl 99.3 6.4E-12 2.2E-16 110.7 9.5 96 230-348 17-112 (170)
180 1jg1_A PIMT;, protein-L-isoasp 99.3 7.8E-12 2.7E-16 116.7 10.5 103 230-352 91-193 (235)
181 1dl5_A Protein-L-isoaspartate 99.3 8.8E-12 3E-16 122.0 11.3 102 230-350 75-177 (317)
182 3dmg_A Probable ribosomal RNA 99.3 1.9E-11 6.4E-16 122.9 13.9 121 230-361 233-354 (381)
183 2pjd_A Ribosomal RNA small sub 99.3 5.1E-12 1.8E-16 125.0 9.5 120 231-361 197-317 (343)
184 3uwp_A Histone-lysine N-methyl 99.3 6.6E-12 2.3E-16 126.1 10.2 105 230-347 173-287 (438)
185 3bgv_A MRNA CAP guanine-N7 met 99.3 1.4E-11 5E-16 119.8 12.4 116 230-351 34-158 (313)
186 3gdh_A Trimethylguanosine synt 99.3 8.5E-13 2.9E-17 123.3 3.5 102 230-347 78-180 (241)
187 1ej0_A FTSJ; methyltransferase 99.3 1.7E-11 5.8E-16 107.4 11.6 125 230-368 22-155 (180)
188 3q7e_A Protein arginine N-meth 99.3 1.5E-11 5.2E-16 122.1 12.5 105 230-346 66-171 (349)
189 1p91_A Ribosomal RNA large sub 99.3 9E-12 3.1E-16 118.2 10.4 99 230-353 85-183 (269)
190 2gs9_A Hypothetical protein TT 99.3 1.3E-11 4.5E-16 112.5 10.7 96 230-348 36-132 (211)
191 2qm3_A Predicted methyltransfe 99.3 2.4E-11 8.2E-16 121.6 13.6 130 230-372 172-307 (373)
192 3dp7_A SAM-dependent methyltra 99.3 1.8E-11 6.1E-16 122.0 12.5 107 230-347 179-286 (363)
193 4dmg_A Putative uncharacterize 99.3 9.4E-11 3.2E-15 118.2 17.7 129 231-368 215-351 (393)
194 3ege_A Putative methyltransfer 99.3 5.3E-12 1.8E-16 119.7 7.8 97 230-348 34-130 (261)
195 1x19_A CRTF-related protein; m 99.3 2E-11 6.9E-16 121.2 12.4 211 115-348 63-295 (359)
196 3bkx_A SAM-dependent methyltra 99.3 1.5E-11 5E-16 116.9 10.8 108 230-348 43-159 (275)
197 3gwz_A MMCR; methyltransferase 99.3 3E-11 1E-15 120.6 13.3 212 115-347 70-306 (369)
198 2plw_A Ribosomal RNA methyltra 99.3 1.8E-11 6.2E-16 110.8 10.5 121 230-363 22-169 (201)
199 2qe6_A Uncharacterized protein 99.3 4.8E-11 1.6E-15 114.5 13.5 108 231-348 78-196 (274)
200 1r18_A Protein-L-isoaspartate( 99.2 1.1E-11 3.7E-16 115.0 8.3 102 230-350 84-196 (227)
201 3bzb_A Uncharacterized protein 99.2 1E-10 3.4E-15 112.5 15.4 133 230-371 79-234 (281)
202 2frx_A Hypothetical protein YE 99.2 4.8E-11 1.7E-15 123.3 13.8 134 230-367 117-268 (479)
203 2fyt_A Protein arginine N-meth 99.2 4.5E-11 1.6E-15 118.2 13.0 104 230-345 64-168 (340)
204 1vbf_A 231AA long hypothetical 99.2 2.4E-11 8.2E-16 112.5 10.4 98 230-350 70-167 (231)
205 3k6r_A Putative transferase PH 99.2 4.1E-11 1.4E-15 115.2 12.2 120 230-368 125-251 (278)
206 3m6w_A RRNA methylase; rRNA me 99.2 6.4E-11 2.2E-15 121.6 14.3 115 230-349 101-230 (464)
207 1u2z_A Histone-lysine N-methyl 99.2 2.5E-11 8.4E-16 123.6 11.0 108 230-347 242-358 (433)
208 3htx_A HEN1; HEN1, small RNA m 99.2 3.6E-11 1.2E-15 129.2 12.6 112 230-353 721-839 (950)
209 2avn_A Ubiquinone/menaquinone 99.2 3.5E-11 1.2E-15 113.8 10.6 101 230-351 54-155 (260)
210 1tw3_A COMT, carminomycin 4-O- 99.2 4.5E-11 1.5E-15 118.5 11.7 105 230-348 183-288 (360)
211 1vlm_A SAM-dependent methyltra 99.2 4.5E-11 1.6E-15 110.0 10.8 118 231-374 48-188 (219)
212 3mcz_A O-methyltransferase; ad 99.2 5.5E-11 1.9E-15 117.5 12.1 106 231-347 180-286 (352)
213 2a14_A Indolethylamine N-methy 99.2 7.2E-12 2.5E-16 119.2 5.0 136 230-371 55-235 (263)
214 2yxl_A PH0851 protein, 450AA l 99.2 1.3E-10 4.5E-15 119.2 14.8 133 230-365 259-409 (450)
215 2yx1_A Hypothetical protein MJ 99.2 4E-11 1.4E-15 118.4 10.4 111 230-364 195-306 (336)
216 1sqg_A SUN protein, FMU protei 99.2 1.8E-10 6.1E-15 117.5 15.5 132 230-365 246-394 (429)
217 3bxo_A N,N-dimethyltransferase 99.2 5.4E-11 1.9E-15 110.2 10.6 101 230-348 40-141 (239)
218 3cc8_A Putative methyltransfer 99.2 8.4E-11 2.9E-15 107.8 11.8 104 230-353 32-135 (230)
219 1ne2_A Hypothetical protein TA 99.2 1.7E-10 5.8E-15 104.5 13.6 112 230-365 51-162 (200)
220 2bm8_A Cephalosporin hydroxyla 99.2 3.1E-11 1.1E-15 113.2 8.8 115 231-365 82-208 (236)
221 2g72_A Phenylethanolamine N-me 99.2 1.8E-11 6.3E-16 117.6 7.1 137 230-371 71-253 (289)
222 3iv6_A Putative Zn-dependent a 99.2 6.2E-11 2.1E-15 113.0 10.6 105 230-349 45-149 (261)
223 2cmg_A Spermidine synthase; tr 99.2 3.9E-11 1.3E-15 114.5 9.2 111 230-363 72-190 (262)
224 2i62_A Nicotinamide N-methyltr 99.2 1.4E-11 4.8E-16 116.0 5.9 137 230-372 56-237 (265)
225 3r0q_C Probable protein argini 99.2 9.9E-11 3.4E-15 117.4 12.0 105 230-347 63-168 (376)
226 3v97_A Ribosomal RNA large sub 99.2 2.1E-10 7.1E-15 123.8 15.1 131 230-368 539-676 (703)
227 2qfm_A Spermine synthase; sper 99.2 1.7E-10 5.9E-15 114.2 12.8 128 229-362 187-327 (364)
228 2y1w_A Histone-arginine methyl 99.2 1.1E-10 3.7E-15 115.8 11.4 104 230-347 50-154 (348)
229 1uwv_A 23S rRNA (uracil-5-)-me 99.2 4.7E-10 1.6E-14 114.5 16.4 125 230-370 286-410 (433)
230 1g6q_1 HnRNP arginine N-methyl 99.2 2.2E-10 7.4E-15 112.7 13.0 104 230-345 38-142 (328)
231 2ip2_A Probable phenazine-spec 99.1 7.1E-11 2.4E-15 115.8 9.3 102 232-347 169-271 (334)
232 3dou_A Ribosomal RNA large sub 99.1 2E-10 7E-15 104.2 11.1 128 230-371 25-161 (191)
233 2nyu_A Putative ribosomal RNA 99.1 2.5E-10 8.4E-15 102.7 11.6 120 230-364 22-161 (196)
234 3giw_A Protein of unknown func 99.1 2.4E-10 8.4E-15 109.3 11.7 128 231-365 79-221 (277)
235 2dul_A N(2),N(2)-dimethylguano 99.1 4.2E-10 1.5E-14 112.8 13.7 102 231-348 48-164 (378)
236 2jjq_A Uncharacterized RNA met 99.1 5.8E-10 2E-14 113.6 14.8 107 230-357 290-396 (425)
237 3bt7_A TRNA (uracil-5-)-methyl 99.1 4.8E-10 1.7E-14 112.0 13.5 121 231-368 214-345 (369)
238 1af7_A Chemotaxis receptor met 99.1 1.2E-10 4.2E-15 111.8 8.2 108 231-348 106-252 (274)
239 2f8l_A Hypothetical protein LM 99.1 3E-10 1E-14 112.3 10.7 129 231-366 131-278 (344)
240 2qy6_A UPF0209 protein YFCK; s 99.1 3.5E-10 1.2E-14 107.6 10.8 131 230-369 60-230 (257)
241 3b3j_A Histone-arginine methyl 99.1 1.2E-10 4E-15 120.5 7.8 104 230-347 158-262 (480)
242 2ih2_A Modification methylase 99.1 2.5E-10 8.7E-15 115.3 9.5 120 230-366 39-186 (421)
243 4a6d_A Hydroxyindole O-methylt 99.1 6.4E-10 2.2E-14 110.4 12.0 103 230-347 179-282 (353)
244 4e2x_A TCAB9; kijanose, tetron 99.0 2.3E-10 8E-15 115.7 8.1 123 230-371 107-250 (416)
245 1zq9_A Probable dimethyladenos 99.0 4.7E-10 1.6E-14 108.2 9.3 77 230-315 28-105 (285)
246 3ldu_A Putative methylase; str 99.0 1.5E-09 5E-14 109.2 12.8 115 230-354 195-350 (385)
247 3ldg_A Putative uncharacterize 99.0 2.6E-09 8.8E-14 107.3 13.6 114 231-354 195-349 (384)
248 2zfu_A Nucleomethylin, cerebra 99.0 5.3E-10 1.8E-14 102.2 7.6 107 230-370 67-175 (215)
249 3k0b_A Predicted N6-adenine-sp 99.0 1.9E-09 6.5E-14 108.7 12.3 114 231-354 202-356 (393)
250 3sso_A Methyltransferase; macr 99.0 5.3E-10 1.8E-14 112.0 8.0 100 230-347 216-323 (419)
251 2b9e_A NOL1/NOP2/SUN domain fa 99.0 4.2E-09 1.5E-13 102.7 14.2 117 230-349 102-235 (309)
252 4hc4_A Protein arginine N-meth 99.0 1.6E-09 5.3E-14 108.5 11.3 103 231-346 84-187 (376)
253 3axs_A Probable N(2),N(2)-dime 99.0 2E-09 6.8E-14 108.3 12.1 122 230-367 52-179 (392)
254 3reo_A (ISO)eugenol O-methyltr 99.0 5.4E-10 1.8E-14 111.6 7.9 97 230-347 203-299 (368)
255 3lst_A CALO1 methyltransferase 99.0 5E-10 1.7E-14 110.7 6.8 102 230-348 184-286 (348)
256 2wa2_A Non-structural protein 99.0 2.5E-10 8.4E-15 109.8 4.3 106 230-348 82-193 (276)
257 2oxt_A Nucleoside-2'-O-methylt 99.0 4.1E-10 1.4E-14 107.6 5.6 105 230-348 74-185 (265)
258 2xyq_A Putative 2'-O-methyl tr 99.0 1E-09 3.4E-14 106.1 8.1 120 230-370 63-193 (290)
259 1fp1_D Isoliquiritigenin 2'-O- 98.9 1.1E-09 3.8E-14 109.2 8.4 97 230-347 209-305 (372)
260 3opn_A Putative hemolysin; str 98.9 1.1E-09 3.7E-14 102.6 7.7 120 230-371 37-181 (232)
261 3lcv_B Sisomicin-gentamicin re 98.9 4.8E-09 1.6E-13 99.1 11.7 124 230-368 132-266 (281)
262 3p9c_A Caffeic acid O-methyltr 98.9 1.2E-09 4E-14 109.0 8.0 97 230-347 201-297 (364)
263 2p41_A Type II methyltransfera 98.9 1.4E-09 4.8E-14 106.0 7.7 104 230-348 82-191 (305)
264 1fp2_A Isoflavone O-methyltran 98.9 1.6E-09 5.6E-14 107.2 8.2 97 230-347 188-287 (352)
265 2h1r_A Dimethyladenosine trans 98.9 3E-09 1E-13 103.2 9.3 75 230-313 42-116 (299)
266 3hp7_A Hemolysin, putative; st 98.9 2.1E-09 7.3E-14 103.8 7.9 99 230-347 85-184 (291)
267 2okc_A Type I restriction enzy 98.9 3.5E-09 1.2E-13 108.4 9.1 112 231-350 172-309 (445)
268 4azs_A Methyltransferase WBDD; 98.9 6.1E-09 2.1E-13 109.8 11.1 75 231-310 67-141 (569)
269 1m6y_A S-adenosyl-methyltransf 98.9 8.6E-09 2.9E-13 100.2 10.8 80 230-311 26-106 (301)
270 2ld4_A Anamorsin; methyltransf 98.8 3.8E-09 1.3E-13 93.5 6.5 107 230-366 12-128 (176)
271 3frh_A 16S rRNA methylase; met 98.8 3E-08 1E-12 92.8 11.7 100 230-346 105-204 (253)
272 1zg3_A Isoflavanone 4'-O-methy 98.8 6.7E-09 2.3E-13 103.0 7.7 96 231-347 194-292 (358)
273 2r6z_A UPF0341 protein in RSP 98.8 9.6E-09 3.3E-13 97.7 8.0 75 231-310 84-168 (258)
274 3ll7_A Putative methyltransfer 98.8 1.5E-08 5E-13 102.4 9.1 109 231-348 94-209 (410)
275 3gru_A Dimethyladenosine trans 98.7 4.9E-08 1.7E-12 94.5 11.9 74 230-312 50-123 (295)
276 3o4f_A Spermidine synthase; am 98.7 5.7E-08 1.9E-12 93.7 11.8 128 229-364 82-218 (294)
277 3v97_A Ribosomal RNA large sub 98.7 1.2E-07 4.3E-12 102.2 14.0 118 230-353 190-352 (703)
278 3tqs_A Ribosomal RNA small sub 98.7 5.1E-08 1.7E-12 92.5 9.4 74 230-310 29-103 (255)
279 1yub_A Ermam, rRNA methyltrans 98.7 5E-10 1.7E-14 105.4 -5.1 108 230-348 29-145 (245)
280 4fzv_A Putative methyltransfer 98.6 5.7E-07 1.9E-11 89.3 15.8 128 230-361 148-303 (359)
281 2ar0_A M.ecoki, type I restric 98.6 1E-07 3.5E-12 99.9 9.7 128 231-364 170-333 (541)
282 3cvo_A Methyltransferase-like 98.6 4E-07 1.4E-11 83.2 12.5 102 231-350 31-154 (202)
283 1qam_A ERMC' methyltransferase 98.6 4.1E-07 1.4E-11 85.4 12.8 59 230-292 30-88 (244)
284 3lkd_A Type I restriction-modi 98.6 3.9E-07 1.3E-11 95.3 13.6 133 230-366 221-381 (542)
285 3s1s_A Restriction endonucleas 98.5 4.3E-07 1.5E-11 97.7 12.6 129 230-364 321-487 (878)
286 3uzu_A Ribosomal RNA small sub 98.5 2.6E-07 9E-12 88.7 9.7 59 230-292 42-102 (279)
287 3fut_A Dimethyladenosine trans 98.5 1.7E-07 6E-12 89.6 7.9 73 230-312 47-119 (271)
288 3c6k_A Spermine synthase; sper 98.5 1.2E-06 4.2E-11 87.0 12.7 120 230-351 205-334 (381)
289 3ftd_A Dimethyladenosine trans 98.4 6.9E-07 2.4E-11 84.3 10.2 58 230-292 31-88 (249)
290 2oyr_A UPF0341 protein YHIQ; a 98.4 2.4E-07 8.2E-12 88.0 6.8 73 232-310 90-171 (258)
291 2wk1_A NOVP; transferase, O-me 98.4 2.3E-06 7.8E-11 82.2 12.9 123 231-368 107-266 (282)
292 3khk_A Type I restriction-modi 98.3 5.1E-07 1.8E-11 94.5 7.2 129 232-366 246-419 (544)
293 1qyr_A KSGA, high level kasuga 98.2 8.9E-07 3.1E-11 83.7 5.4 77 230-311 21-98 (252)
294 4gqb_A Protein arginine N-meth 98.1 1.2E-05 4E-10 85.3 10.8 101 231-344 358-463 (637)
295 2efj_A 3,7-dimethylxanthine me 98.1 2.5E-05 8.4E-10 78.1 12.5 167 231-414 53-292 (384)
296 3b5i_A S-adenosyl-L-methionine 98.0 1.9E-05 6.6E-10 78.7 10.0 117 230-348 52-225 (374)
297 2k4m_A TR8_protein, UPF0146 pr 98.0 1.4E-05 4.9E-10 68.7 7.3 85 231-348 36-121 (153)
298 3ua3_A Protein arginine N-meth 98.0 2E-05 6.8E-10 83.7 9.7 108 231-345 410-531 (745)
299 1wg8_A Predicted S-adenosylmet 97.9 3E-05 1E-09 73.9 9.5 73 230-309 22-95 (285)
300 1m6e_X S-adenosyl-L-methionnin 97.9 3.2E-05 1.1E-09 76.6 9.3 173 230-414 51-280 (359)
301 3evf_A RNA-directed RNA polyme 97.9 1.5E-05 5.2E-10 75.6 6.6 124 230-364 74-202 (277)
302 3vyw_A MNMC2; tRNA wobble urid 97.8 0.00019 6.6E-09 69.3 12.7 129 231-371 97-245 (308)
303 3gcz_A Polyprotein; flavivirus 97.7 3E-05 1E-09 73.7 5.3 124 230-364 90-219 (282)
304 2zig_A TTHA0409, putative modi 97.5 0.00019 6.5E-09 69.1 7.7 47 230-278 235-281 (297)
305 3ufb_A Type I restriction-modi 97.5 0.00042 1.4E-08 72.2 10.7 130 231-364 218-383 (530)
306 3eld_A Methyltransferase; flav 97.4 0.0002 7E-09 68.4 6.7 123 230-364 81-209 (300)
307 3lkz_A Non-structural protein 97.2 0.00068 2.3E-08 64.6 7.7 109 231-349 95-205 (321)
308 3pvc_A TRNA 5-methylaminomethy 97.2 0.0013 4.4E-08 70.6 10.7 131 231-370 59-229 (689)
309 3p8z_A Mtase, non-structural p 97.1 0.00032 1.1E-08 64.9 4.5 107 230-348 78-186 (267)
310 3tka_A Ribosomal RNA small sub 97.1 0.0014 4.7E-08 64.0 9.1 76 230-310 57-135 (347)
311 3ps9_A TRNA 5-methylaminomethy 97.1 0.0032 1.1E-07 67.3 12.2 130 231-369 67-236 (676)
312 2px2_A Genome polyprotein [con 96.9 0.0016 5.5E-08 61.0 7.0 104 230-348 73-183 (269)
313 4auk_A Ribosomal RNA large sub 96.8 0.0079 2.7E-07 59.4 11.3 68 230-311 211-278 (375)
314 1i4w_A Mitochondrial replicati 96.7 0.0027 9.3E-08 62.6 7.6 59 231-292 59-117 (353)
315 1g60_A Adenine-specific methyl 96.6 0.0027 9.1E-08 59.7 6.1 47 230-278 212-258 (260)
316 2oo3_A Protein involved in cat 96.4 0.01 3.6E-07 56.4 9.0 123 231-366 92-218 (283)
317 3tos_A CALS11; methyltransfera 96.3 0.013 4.5E-07 55.1 9.0 106 231-346 70-215 (257)
318 1g55_A DNA cytosine methyltran 96.2 0.021 7.1E-07 55.9 10.2 129 232-370 3-145 (343)
319 3r24_A NSP16, 2'-O-methyl tran 96.1 0.024 8.4E-07 54.0 9.8 100 229-348 108-217 (344)
320 3g7u_A Cytosine-specific methy 95.9 0.076 2.6E-06 52.7 13.0 127 232-368 3-145 (376)
321 2zig_A TTHA0409, putative modi 95.9 0.027 9.2E-07 53.8 9.1 86 279-369 19-131 (297)
322 2py6_A Methyltransferase FKBM; 95.7 0.028 9.6E-07 56.4 9.0 61 230-290 226-292 (409)
323 1boo_A Protein (N-4 cytosine-s 95.5 0.056 1.9E-06 52.4 9.8 85 280-369 13-115 (323)
324 2c7p_A Modification methylase 95.4 0.21 7.3E-06 48.4 13.8 125 231-370 11-149 (327)
325 1g60_A Adenine-specific methyl 94.6 0.13 4.3E-06 48.1 9.1 81 282-368 5-93 (260)
326 3fwz_A Inner membrane protein 94.4 0.35 1.2E-05 40.3 10.7 111 232-368 8-121 (140)
327 3qv2_A 5-cytosine DNA methyltr 94.2 0.38 1.3E-05 46.7 11.8 130 231-370 10-156 (327)
328 1f8f_A Benzyl alcohol dehydrog 93.5 0.22 7.5E-06 48.7 8.9 96 230-347 190-288 (371)
329 1pl8_A Human sorbitol dehydrog 93.4 0.41 1.4E-05 46.5 10.5 98 230-347 171-272 (356)
330 3jv7_A ADH-A; dehydrogenase, n 93.3 0.35 1.2E-05 46.7 9.8 98 230-347 171-269 (345)
331 2dph_A Formaldehyde dismutase; 92.8 0.29 9.8E-06 48.4 8.5 108 230-347 185-298 (398)
332 1boo_A Protein (N-4 cytosine-s 92.2 0.13 4.5E-06 49.7 5.0 60 230-292 252-311 (323)
333 4h0n_A DNMT2; SAH binding, tra 92.1 0.37 1.3E-05 46.8 8.2 129 232-370 4-145 (333)
334 3fpc_A NADP-dependent alcohol 91.8 0.45 1.5E-05 46.1 8.4 96 230-347 166-265 (352)
335 1e3j_A NADP(H)-dependent ketos 91.5 1 3.6E-05 43.4 10.7 96 230-347 168-270 (352)
336 1eg2_A Modification methylase 91.4 0.53 1.8E-05 45.4 8.3 82 282-368 39-134 (319)
337 1eg2_A Modification methylase 91.4 0.23 7.8E-06 48.0 5.7 47 230-278 242-291 (319)
338 2h6e_A ADH-4, D-arabinose 1-de 91.1 1.2 4E-05 42.9 10.5 96 230-347 170-268 (344)
339 3s2e_A Zinc-containing alcohol 91.0 0.7 2.4E-05 44.4 8.8 94 230-347 166-262 (340)
340 1rjd_A PPM1P, carboxy methyl t 90.9 2.3 7.8E-05 41.2 12.3 126 230-363 97-253 (334)
341 1kol_A Formaldehyde dehydrogen 90.6 0.89 3E-05 44.8 9.3 107 230-347 185-299 (398)
342 3two_A Mannitol dehydrogenase; 90.6 0.72 2.5E-05 44.5 8.5 88 230-347 176-264 (348)
343 1cdo_A Alcohol dehydrogenase; 90.0 1.2 4.2E-05 43.3 9.7 96 230-347 192-293 (374)
344 4ej6_A Putative zinc-binding d 89.9 0.98 3.3E-05 44.1 8.9 100 230-347 182-283 (370)
345 4dvj_A Putative zinc-dependent 89.8 0.85 2.9E-05 44.4 8.3 96 231-347 172-269 (363)
346 1pqw_A Polyketide synthase; ro 89.6 0.68 2.3E-05 40.6 6.8 96 230-348 38-137 (198)
347 1p0f_A NADP-dependent alcohol 89.3 1.3 4.5E-05 43.1 9.3 96 230-347 191-292 (373)
348 3m6i_A L-arabinitol 4-dehydrog 89.3 2.1 7.2E-05 41.4 10.7 98 230-347 179-282 (363)
349 2jhf_A Alcohol dehydrogenase E 89.2 1.6 5.4E-05 42.5 9.8 96 230-347 191-292 (374)
350 2qrv_A DNA (cytosine-5)-methyl 89.1 0.95 3.3E-05 43.1 7.8 77 230-312 15-92 (295)
351 2fzw_A Alcohol dehydrogenase c 88.7 1.5 5.2E-05 42.6 9.2 96 230-347 190-291 (373)
352 1e3i_A Alcohol dehydrogenase, 88.6 1.8 6E-05 42.2 9.6 96 230-347 195-296 (376)
353 1vj0_A Alcohol dehydrogenase, 88.5 1.6 5.6E-05 42.6 9.4 96 230-347 195-297 (380)
354 2d8a_A PH0655, probable L-thre 88.0 1.4 4.7E-05 42.5 8.3 96 230-347 167-266 (348)
355 3llv_A Exopolyphosphatase-rela 87.9 3.5 0.00012 33.7 9.8 110 232-367 7-118 (141)
356 3c85_A Putative glutathione-re 87.9 3.8 0.00013 35.2 10.5 112 231-368 39-155 (183)
357 3uko_A Alcohol dehydrogenase c 87.7 1.4 4.8E-05 43.0 8.3 96 230-347 193-294 (378)
358 3l9w_A Glutathione-regulated p 87.6 2.3 7.8E-05 42.4 9.9 100 232-353 5-107 (413)
359 3ubt_Y Modification methylase 87.4 2.4 8.2E-05 40.4 9.6 123 233-369 2-138 (331)
360 4eez_A Alcohol dehydrogenase 1 87.2 3.8 0.00013 39.1 11.0 98 230-347 163-262 (348)
361 3uog_A Alcohol dehydrogenase; 87.2 2.5 8.5E-05 41.0 9.7 94 230-347 189-286 (363)
362 1uuf_A YAHK, zinc-type alcohol 87.1 2.6 8.7E-05 41.1 9.7 93 230-347 194-287 (369)
363 3l4b_C TRKA K+ channel protien 87.0 3 0.0001 37.2 9.4 101 234-354 3-105 (218)
364 2hcy_A Alcohol dehydrogenase 1 86.8 1.9 6.4E-05 41.5 8.5 95 230-347 169-268 (347)
365 1jvb_A NAD(H)-dependent alcoho 86.5 1.4 4.7E-05 42.5 7.4 97 230-347 170-270 (347)
366 1v3u_A Leukotriene B4 12- hydr 86.1 2.6 8.9E-05 40.1 9.0 94 230-347 145-243 (333)
367 3me5_A Cytosine-specific methy 86.0 6.8 0.00023 39.9 12.4 132 231-368 88-254 (482)
368 2eih_A Alcohol dehydrogenase; 84.9 2.5 8.5E-05 40.5 8.3 95 230-347 166-264 (343)
369 3gms_A Putative NADPH:quinone 84.9 1.6 5.5E-05 41.8 6.9 95 230-347 144-242 (340)
370 4dcm_A Ribosomal RNA large sub 84.6 2.9 9.9E-05 41.0 8.7 112 231-364 39-152 (375)
371 2j3h_A NADP-dependent oxidored 84.3 2.6 8.8E-05 40.3 8.1 95 230-347 155-254 (345)
372 4had_A Probable oxidoreductase 83.4 2.8 9.5E-05 40.2 7.9 73 231-315 23-98 (350)
373 1lss_A TRK system potassium up 83.3 16 0.00053 29.2 11.7 111 232-367 5-117 (140)
374 3fbg_A Putative arginate lyase 83.1 3.7 0.00013 39.4 8.7 95 230-346 150-246 (346)
375 4a2c_A Galactitol-1-phosphate 82.5 5.3 0.00018 38.1 9.5 97 230-347 160-259 (346)
376 1id1_A Putative potassium chan 82.5 6.9 0.00024 32.5 9.2 114 232-367 4-120 (153)
377 2vz8_A Fatty acid synthase; tr 82.4 0.24 8.2E-06 60.4 -0.3 102 231-347 1241-1347(2512)
378 4eye_A Probable oxidoreductase 82.3 3 0.0001 40.0 7.6 94 230-347 159-256 (342)
379 2ixa_A Alpha-N-acetylgalactosa 82.1 10 0.00034 37.8 11.7 78 232-315 21-103 (444)
380 3ip1_A Alcohol dehydrogenase, 81.8 3.8 0.00013 40.3 8.3 97 230-347 213-317 (404)
381 1rjw_A ADH-HT, alcohol dehydro 81.7 4.6 0.00016 38.6 8.7 93 230-347 164-260 (339)
382 1yb5_A Quinone oxidoreductase; 80.8 5.7 0.0002 38.2 9.1 95 230-347 170-268 (351)
383 4hkt_A Inositol 2-dehydrogenas 80.6 11 0.00036 35.8 10.8 107 233-367 5-116 (331)
384 2b5w_A Glucose dehydrogenase; 80.5 4 0.00014 39.3 7.9 92 232-347 174-272 (357)
385 4b7c_A Probable oxidoreductase 80.3 3.9 0.00013 38.9 7.6 95 230-347 149-247 (336)
386 1zkd_A DUF185; NESG, RPR58, st 79.6 2.8 9.4E-05 41.5 6.3 58 226-285 76-140 (387)
387 1piw_A Hypothetical zinc-type 79.3 2.2 7.5E-05 41.3 5.5 92 230-346 179-274 (360)
388 2aef_A Calcium-gated potassium 79.2 13 0.00043 33.2 10.4 100 232-354 10-111 (234)
389 1lnq_A MTHK channels, potassiu 78.1 10 0.00036 36.0 9.9 99 232-353 116-216 (336)
390 2km1_A Protein DRE2; yeast, an 77.8 4.4 0.00015 33.9 6.1 76 263-346 21-96 (136)
391 1qor_A Quinone oxidoreductase; 77.3 4.4 0.00015 38.4 6.9 95 230-347 140-238 (327)
392 2c0c_A Zinc binding alcohol de 76.8 6.4 0.00022 38.0 8.0 95 230-348 163-261 (362)
393 3qwb_A Probable quinone oxidor 76.6 5.2 0.00018 38.0 7.2 95 230-347 148-246 (334)
394 3rc1_A Sugar 3-ketoreductase; 76.0 24 0.00082 33.7 11.9 109 232-367 28-142 (350)
395 2dq4_A L-threonine 3-dehydroge 75.4 6 0.0002 37.8 7.3 93 230-347 164-261 (343)
396 3e18_A Oxidoreductase; dehydro 74.3 15 0.00052 35.3 10.0 107 232-366 6-117 (359)
397 3ezy_A Dehydrogenase; structur 74.2 19 0.00064 34.3 10.5 109 233-367 4-117 (344)
398 2uyo_A Hypothetical protein ML 73.8 16 0.00056 34.7 9.8 109 231-348 103-218 (310)
399 3jyn_A Quinone oxidoreductase; 73.4 5.1 0.00017 38.0 6.2 95 230-347 140-238 (325)
400 2cdc_A Glucose dehydrogenase g 73.2 10 0.00036 36.4 8.5 92 231-347 181-277 (366)
401 1wly_A CAAR, 2-haloacrylate re 72.9 11 0.00039 35.6 8.6 95 230-347 145-243 (333)
402 3db2_A Putative NADPH-dependen 72.4 23 0.00078 33.8 10.7 108 232-366 6-118 (354)
403 3cea_A MYO-inositol 2-dehydrog 72.4 24 0.00081 33.4 10.8 111 231-367 8-125 (346)
404 3swr_A DNA (cytosine-5)-methyl 72.3 60 0.0021 36.0 15.1 128 231-369 540-697 (1002)
405 3iht_A S-adenosyl-L-methionine 72.3 4 0.00014 35.1 4.4 105 231-346 41-145 (174)
406 3av4_A DNA (cytosine-5)-methyl 72.1 44 0.0015 38.2 14.2 131 231-369 851-1008(1330)
407 2g1u_A Hypothetical protein TM 71.5 15 0.00051 30.5 8.1 115 230-367 18-133 (155)
408 3gaz_A Alcohol dehydrogenase s 71.3 11 0.00039 35.9 8.2 94 230-347 150-245 (343)
409 1wma_A Carbonyl reductase [NAD 70.5 30 0.001 30.9 10.6 117 231-349 4-139 (276)
410 1zh8_A Oxidoreductase; TM0312, 69.5 27 0.00093 33.1 10.5 74 230-315 17-94 (340)
411 4ft4_B DNA (cytosine-5)-methyl 69.2 65 0.0022 34.4 14.5 57 231-292 212-273 (784)
412 2j8z_A Quinone oxidoreductase; 69.1 8.9 0.0003 36.8 6.9 95 230-347 162-260 (354)
413 4gqa_A NAD binding oxidoreduct 68.9 14 0.00047 36.2 8.4 72 232-315 27-108 (412)
414 2cf5_A Atccad5, CAD, cinnamyl 67.7 12 0.00041 35.9 7.6 94 230-347 180-274 (357)
415 2zb4_A Prostaglandin reductase 67.6 16 0.00054 34.9 8.4 93 232-347 162-259 (357)
416 2hmt_A YUAA protein; RCK, KTN, 67.3 36 0.0012 27.0 9.5 111 232-367 7-119 (144)
417 3i23_A Oxidoreductase, GFO/IDH 67.2 18 0.00063 34.5 8.7 109 233-367 4-118 (349)
418 1yqd_A Sinapyl alcohol dehydro 67.1 15 0.00051 35.4 8.1 94 230-347 187-281 (366)
419 3ec7_A Putative dehydrogenase; 67.1 29 0.001 33.2 10.2 111 232-367 24-140 (357)
420 2dpo_A L-gulonate 3-dehydrogen 66.0 41 0.0014 32.0 10.8 96 232-347 7-122 (319)
421 3goh_A Alcohol dehydrogenase, 65.6 11 0.00039 35.3 6.8 87 230-348 142-229 (315)
422 4dkj_A Cytosine-specific methy 64.9 23 0.00079 35.0 9.0 45 231-275 10-59 (403)
423 3gqv_A Enoyl reductase; medium 64.4 22 0.00075 34.3 8.7 95 230-347 164-262 (371)
424 1iz0_A Quinone oxidoreductase; 64.4 21 0.00072 33.1 8.4 90 230-347 125-217 (302)
425 3mz0_A Inositol 2-dehydrogenas 64.4 32 0.0011 32.6 9.9 110 233-367 4-119 (344)
426 4dup_A Quinone oxidoreductase; 64.1 12 0.0004 35.9 6.7 93 230-347 167-264 (353)
427 3moi_A Probable dehydrogenase; 64.0 35 0.0012 33.0 10.2 69 233-314 4-75 (387)
428 4h3v_A Oxidoreductase domain p 63.6 14 0.00047 35.4 7.1 71 233-315 8-87 (390)
429 3euw_A MYO-inositol dehydrogen 62.3 31 0.0011 32.6 9.3 108 232-366 5-117 (344)
430 4f3n_A Uncharacterized ACR, CO 61.6 5.7 0.00019 39.8 3.9 46 231-276 138-188 (432)
431 4ezb_A Uncharacterized conserv 61.5 49 0.0017 31.1 10.5 109 232-367 25-141 (317)
432 3q2i_A Dehydrogenase; rossmann 60.3 52 0.0018 31.2 10.6 71 231-314 13-86 (354)
433 3o26_A Salutaridine reductase; 59.4 24 0.00083 32.3 7.8 61 231-292 12-74 (311)
434 3u3x_A Oxidoreductase; structu 59.2 71 0.0024 30.5 11.3 72 231-314 26-99 (361)
435 4gmf_A Yersiniabactin biosynth 58.7 95 0.0032 30.0 12.2 112 231-367 7-121 (372)
436 3e9m_A Oxidoreductase, GFO/IDH 58.5 28 0.00095 32.9 8.1 110 232-367 6-120 (330)
437 2q3e_A UDP-glucose 6-dehydroge 58.4 76 0.0026 31.6 11.7 124 232-365 6-149 (467)
438 3uuw_A Putative oxidoreductase 58.1 53 0.0018 30.4 10.0 107 232-367 7-119 (308)
439 1ydw_A AX110P-like protein; st 57.6 74 0.0025 30.2 11.1 113 232-368 7-125 (362)
440 3ic5_A Putative saccharopine d 56.5 62 0.0021 24.5 10.1 105 231-362 5-114 (118)
441 3nx4_A Putative oxidoreductase 56.5 20 0.00069 33.6 6.7 89 234-347 150-240 (324)
442 4a7p_A UDP-glucose dehydrogena 55.7 20 0.00067 36.0 6.7 122 232-365 9-147 (446)
443 3g0o_A 3-hydroxyisobutyrate de 55.2 30 0.001 32.2 7.7 109 232-367 8-122 (303)
444 3btv_A Galactose/lactose metab 54.7 62 0.0021 31.9 10.3 73 232-314 21-100 (438)
445 3o38_A Short chain dehydrogena 54.7 38 0.0013 30.5 8.1 79 230-310 21-108 (266)
446 3gg2_A Sugar dehydrogenase, UD 54.6 1.4E+02 0.005 29.5 13.0 119 233-363 4-138 (450)
447 4fn4_A Short chain dehydrogena 54.6 44 0.0015 30.6 8.5 61 230-292 6-68 (254)
448 3c1a_A Putative oxidoreductase 54.6 44 0.0015 31.2 8.8 107 232-367 11-122 (315)
449 3e82_A Putative oxidoreductase 54.4 89 0.003 29.8 11.1 106 232-366 8-119 (364)
450 1xa0_A Putative NADPH dependen 54.3 22 0.00075 33.4 6.6 91 233-347 152-245 (328)
451 4gx0_A TRKA domain protein; me 54.1 36 0.0012 34.7 8.7 99 233-353 129-229 (565)
452 1xu9_A Corticosteroid 11-beta- 53.7 37 0.0013 31.0 8.0 79 231-310 28-113 (286)
453 3vtf_A UDP-glucose 6-dehydroge 53.5 32 0.0011 34.5 7.8 106 231-348 21-144 (444)
454 4fb5_A Probable oxidoreductase 53.2 41 0.0014 32.0 8.5 73 231-315 25-106 (393)
455 3qha_A Putative oxidoreductase 52.9 39 0.0013 31.4 8.0 107 232-367 16-125 (296)
456 2o3j_A UDP-glucose 6-dehydroge 52.9 1.1E+02 0.0039 30.5 12.0 124 232-365 10-154 (481)
457 3krt_A Crotonyl COA reductase; 52.8 31 0.0011 34.2 7.7 95 230-347 228-343 (456)
458 3mag_A VP39; methylated adenin 52.5 9.2 0.00032 36.2 3.4 51 230-287 60-114 (307)
459 3ek2_A Enoyl-(acyl-carrier-pro 51.8 1.1E+02 0.0036 27.3 10.7 117 230-348 13-153 (271)
460 3pxx_A Carveol dehydrogenase; 51.8 1.3E+02 0.0046 26.9 13.3 117 230-348 9-153 (287)
461 3kux_A Putative oxidoreductase 51.5 1.1E+02 0.0038 28.8 11.2 69 232-315 8-79 (352)
462 3m2t_A Probable dehydrogenase; 51.2 18 0.00061 34.8 5.4 70 232-313 6-78 (359)
463 3lf2_A Short chain oxidoreduct 51.1 60 0.002 29.2 8.9 62 230-292 7-71 (265)
464 3ohs_X Trans-1,2-dihydrobenzen 50.9 91 0.0031 29.2 10.4 109 233-367 4-119 (334)
465 1tlt_A Putative oxidoreductase 50.9 1.1E+02 0.0038 28.3 11.0 108 232-368 6-119 (319)
466 4g65_A TRK system potassium up 50.8 17 0.00059 36.5 5.4 52 233-292 5-58 (461)
467 1gu7_A Enoyl-[acyl-carrier-pro 50.4 38 0.0013 32.2 7.7 101 230-347 166-274 (364)
468 3evn_A Oxidoreductase, GFO/IDH 50.2 25 0.00086 33.1 6.3 110 232-367 6-120 (329)
469 3gdo_A Uncharacterized oxidore 50.2 1.6E+02 0.0055 27.8 12.2 106 232-366 6-117 (358)
470 3qiv_A Short-chain dehydrogena 50.0 60 0.0021 28.8 8.6 79 230-310 8-93 (253)
471 3v5n_A Oxidoreductase; structu 50.0 74 0.0025 31.1 9.9 79 232-315 38-122 (417)
472 2nvw_A Galactose/lactose metab 49.7 75 0.0026 31.9 10.0 74 231-314 39-119 (479)
473 2y0c_A BCEC, UDP-glucose dehyd 49.3 68 0.0023 32.2 9.6 121 231-363 8-144 (478)
474 3pk0_A Short-chain dehydrogena 49.1 45 0.0015 30.1 7.6 62 230-292 9-72 (262)
475 3tjr_A Short chain dehydrogena 48.6 64 0.0022 29.8 8.8 79 230-310 30-115 (301)
476 2glx_A 1,5-anhydro-D-fructose 48.5 81 0.0028 29.3 9.6 108 233-367 2-115 (332)
477 3nyw_A Putative oxidoreductase 47.8 64 0.0022 28.8 8.4 79 230-310 6-94 (250)
478 4a27_A Synaptic vesicle membra 47.5 28 0.00095 33.1 6.1 94 230-347 142-237 (349)
479 3h7a_A Short chain dehydrogena 47.4 49 0.0017 29.7 7.6 78 230-310 6-90 (252)
480 4fs3_A Enoyl-[acyl-carrier-pro 47.2 55 0.0019 29.5 7.9 79 230-310 5-93 (256)
481 3ucx_A Short chain dehydrogena 46.6 83 0.0028 28.3 9.1 78 230-310 10-95 (264)
482 3pef_A 6-phosphogluconate dehy 45.9 49 0.0017 30.3 7.5 107 233-367 3-115 (287)
483 3upl_A Oxidoreductase; rossman 45.3 86 0.003 31.3 9.5 133 231-371 23-189 (446)
484 3l77_A Short-chain alcohol deh 45.0 74 0.0025 27.8 8.3 79 231-310 2-87 (235)
485 2hwk_A Helicase NSP2; rossman 44.7 36 0.0012 32.2 6.0 60 302-364 205-272 (320)
486 3ojo_A CAP5O; rossmann fold, c 44.1 69 0.0024 31.8 8.6 120 231-366 11-149 (431)
487 1tt7_A YHFP; alcohol dehydroge 43.9 22 0.00077 33.4 4.8 91 233-347 153-246 (330)
488 3svt_A Short-chain type dehydr 43.9 79 0.0027 28.7 8.5 62 230-292 10-75 (281)
489 3ggo_A Prephenate dehydrogenas 43.5 1.2E+02 0.0041 28.4 9.9 105 232-361 34-142 (314)
490 1zcj_A Peroxisomal bifunctiona 43.4 2.1E+02 0.0074 28.3 12.2 96 232-348 38-150 (463)
491 3fhl_A Putative oxidoreductase 43.2 79 0.0027 30.1 8.7 106 232-366 6-117 (362)
492 1yb1_A 17-beta-hydroxysteroid 43.0 92 0.0032 28.0 8.8 78 231-310 31-115 (272)
493 3e8x_A Putative NAD-dependent 42.9 1.6E+02 0.0055 25.4 10.2 70 230-311 20-92 (236)
494 1mv8_A GMD, GDP-mannose 6-dehy 42.7 1.7E+02 0.0058 28.6 11.3 119 234-364 3-141 (436)
495 3i1j_A Oxidoreductase, short c 42.6 65 0.0022 28.4 7.5 59 230-289 13-73 (247)
496 3awd_A GOX2181, putative polyo 42.5 98 0.0033 27.3 8.8 60 231-292 13-74 (260)
497 3b1f_A Putative prephenate deh 42.1 1.3E+02 0.0045 27.3 9.8 91 232-347 7-100 (290)
498 3dmg_A Probable ribosomal RNA 41.9 80 0.0027 30.6 8.5 108 231-362 46-153 (381)
499 3rih_A Short chain dehydrogena 41.7 42 0.0014 31.1 6.2 62 230-292 40-103 (293)
500 3tka_A Ribosomal RNA small sub 41.5 37 0.0013 32.9 5.8 36 328-364 254-290 (347)
No 1
>16pk_A PGK, 3-phosphoglycerate kinase; ternary complex, glycolysis, transferase, bisubstrate, analog; HET: BIS EPE; 1.60A {Trypanosoma brucei} SCOP: c.86.1.1 PDB: 13pk_A*
Probab=100.00 E-value=2.6e-65 Score=505.31 Aligned_cols=211 Identities=27% Similarity=0.481 Sum_probs=196.1
Q ss_pred CCCCCCcEEEEEcCCccchHHHHHHHHHHhcCeEEEehHHHHHHHHhcCCCCCCcccccCchHHHHHHHHHHhhCCCeee
Q 014711 2 AKLDEKPYAAIIGGGNLCNKAAALHFLASRCDGLIFVGLMSFQIMHALGLPVPPELVEKGANDAASDLIQFARDKHITIL 81 (420)
Q Consensus 2 ~~~~~~p~~~i~GG~kv~dki~~~~~l~~~~d~i~~gG~~a~~fl~a~g~~ig~s~~e~~~~~~a~~~~~~~~~~~~~i~ 81 (420)
+++|+||+++|+|||||||||++|+||++|||+|||||+||||||+|+|++||+|++|++.++.|++|+++++++|++|+
T Consensus 200 l~~p~rP~vaIlGGaKVsdKi~vi~nLl~kvD~liiGGgma~tFl~A~G~~iG~Sl~E~d~~~~A~~ll~ka~~~g~~i~ 279 (415)
T 16pk_A 200 LGNPPRPLVAIVGGAKVSDKIQLLDNMLQRIDYLLIGGAMAYTFLKAQGYSIGKSKCEESKLEFARSLLKKAEDRKVQVI 279 (415)
T ss_dssp HSCCCSSEEEEECSSCSGGGHHHHHHHGGGCSEEEECTTHHHHHHHHHTCCCTTCCCCGGGHHHHHHHHHHHHHTTCEEE
T ss_pred hcCCCCCeEEEEcCcchhhHHHHHHHHHHhcCeeEeCcHHHHHHHHHcCCCcCccccChhhHHHHHHHHHHHHhcCCEEE
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeEEEecCC-CCCceeEecCCCCCCCCCcccCCcccHHHHHHHhcCCCeEEEeccceEEEcCCCCchHHHHHHHHHhh
Q 014711 82 YPKDFWCTKIH-HPNQVEIFPSHGIPDGWEPVDIGPRSVEEITSTITKCKKVIWVGPVKFRFSSQYSNGASKLTGMLCKV 160 (420)
Q Consensus 82 lP~D~~~~~~~-~~~~~~~~~~~~i~~~~~~~DiGp~T~~~~~~~~~~~~~i~wnGp~G~~e~~~f~~GT~~l~~~~a~~ 160 (420)
||+|++|++++ .+.+..+++.++||+|||++||||+|++.|++.|..|+||+|||||||||.++|+.||++++++++++
T Consensus 280 lPvD~vva~~f~~~a~~~~~~~~~ip~~~m~lDIGp~T~~~~~~~i~~akTivWNGPmGvFE~~~Fa~GT~~va~aia~~ 359 (415)
T 16pk_A 280 LPIDHVCHTEFKAVDSPLITEDQNIPEGHMALDIGPKTIEKYVQTIGKCKSAIWNGPMGVFEMVPYSKGTFAIAKAMGRG 359 (415)
T ss_dssp CCSSEEEESSSSCCSSCEECSSSCCCTTCEEEEECHHHHHHHHHHHTTCSEEEEESCSSCTTSGGGCHHHHHHHHHHHHH
T ss_pred CCceeehhhcccCCCceEEeehhcCCCCCEEeecCHHHHHHHHHHHHhCCEEEEECCcccccCchHHHHHHHHHHHHHhc
Confidence 99999999986 44556678889999999999999999999999999999999999999999999999999999999997
Q ss_pred hcCCCCeeEechhH---HHHHhhcCCCcceeeeecCCCeeeeeeccccCCCcccccc
Q 014711 161 SQGTCNVTVIGSMA---CKAIAKVSSSIFGLNMVESGSAVWEFLKGRMLPGVSALDR 214 (420)
Q Consensus 161 ~~~~~~~~i~gg~~---~~~~~~~~~~~~~~st~~GGGa~le~l~g~~lPgv~aL~~ 214 (420)
++..+.+||+||++ ++..+|+.++++|+|| ||||+|+||+|+.+|++++|.+
T Consensus 360 t~~~~a~sIvGGGDt~aAv~~~G~~d~~shiST--GGGA~Le~LeGk~LPgv~aL~~ 414 (415)
T 16pk_A 360 THEHGLMSIIGGGDSASAAELSGEAKRMSHVST--GGGASLELLEGKTLPGVTVLDD 414 (415)
T ss_dssp HHHHCCEEEECSHHHHHHHHHTTCTTTSSEECS--CHHHHHHHHTTCCCHHHHTSCB
T ss_pred cCCCCCEEEECCcHHHHHHHHcCCccCceEEeC--ChHHHHHHHcCCCcchHHHhhc
Confidence 52112488888875 4457889999999999 8999999999999999999864
No 2
>1vpe_A Phosphoglycerate kinase; transferase, hyperthermostability, crystal, AMP-PNP, 3-PGA; HET: ANP 3PG; 2.00A {Thermotoga maritima} SCOP: c.86.1.1
Probab=100.00 E-value=3e-65 Score=503.34 Aligned_cols=210 Identities=26% Similarity=0.503 Sum_probs=196.4
Q ss_pred CCCCCCcEEEEEcCCccchHHHHHHHHHHhcCeEEEehHHHHHHHHhcCCCCCCcccccCchHHHHHHHHHHhhCCCeee
Q 014711 2 AKLDEKPYAAIIGGGNLCNKAAALHFLASRCDGLIFVGLMSFQIMHALGLPVPPELVEKGANDAASDLIQFARDKHITIL 81 (420)
Q Consensus 2 ~~~~~~p~~~i~GG~kv~dki~~~~~l~~~~d~i~~gG~~a~~fl~a~g~~ig~s~~e~~~~~~a~~~~~~~~~~~~~i~ 81 (420)
+++|+||+++|+|||||||||.+|+||++|||+|||||+||||||+|+|++||+|++|++.++.|++|+++++++|++|+
T Consensus 181 l~~p~rP~vaIlGGaKVsdKi~vi~nLl~kvD~liiGGgma~tFl~A~G~~iG~SL~E~d~~~~a~~ll~ka~~~g~~i~ 260 (398)
T 1vpe_A 181 TYNPEKPYVVVLGGAKVSDKIGVITNLMEKADRILIGGAMMFTFLKALGKEVGSSRVEEDKIDLAKELVEKAKEKGVEIV 260 (398)
T ss_dssp HHCCCSSEEEEECSSCHHHHHHHHHHHTTTCSEEEECTTTHHHHHHHTSCCCTTSCCCGGGHHHHHHHHHHHHHTTCEEE
T ss_pred hcCCCCCeEEEEcCcchhhHHHHHHHHHHhcCeeEeCcHHHHHHHHHcCCCCCchhcChhhHHHHHHHHHHHHhcCCEEE
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeEEEecCC-CCCceeEec-CCCCCCCCCcccCCcccHHHHHHHhcCCCeEEEeccceEEEcCCCCchHHHHHHHHHh
Q 014711 82 YPKDFWCTKIH-HPNQVEIFP-SHGIPDGWEPVDIGPRSVEEITSTITKCKKVIWVGPVKFRFSSQYSNGASKLTGMLCK 159 (420)
Q Consensus 82 lP~D~~~~~~~-~~~~~~~~~-~~~i~~~~~~~DiGp~T~~~~~~~~~~~~~i~wnGp~G~~e~~~f~~GT~~l~~~~a~ 159 (420)
||+|++|++++ .+.+..+++ .++||++||++||||+|++.|++.+..|+||+|||||||||.++|+.||+++++++++
T Consensus 261 lPvD~vva~~f~~~a~~~~~~~~~~ip~~~m~lDIGp~T~~~~~~~i~~akTivWNGPmGvFE~~~Fa~GT~~va~aia~ 340 (398)
T 1vpe_A 261 LPVDAVIAQKIEPGVEKKVVRIDDGIPEGWMGLDIGPETIELFKQKLSDAKTVVWNGPMGVFEIDDFAEGTKQVALAIAA 340 (398)
T ss_dssp CCSEEEEESSCSTTCCCEEEETTTCCCTTCEEEEECHHHHHHHHHHHTTCSEEEEESCSSCTTSGGGCHHHHHHHHHHHH
T ss_pred CCceeehhhcccCCCCeEEecccccCCCCCEeeecCHHHHHHHHHHHhhCCEEEEECCcccccCchHHHHHHHHHHHHHh
Confidence 99999999986 445566778 8999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCCeeEechhH---HHHHhhcCCCcceeeeecCCCeeeeeeccccCCCcccccc
Q 014711 160 VSQGTCNVTVIGSMA---CKAIAKVSSSIFGLNMVESGSAVWEFLKGRMLPGVSALDR 214 (420)
Q Consensus 160 ~~~~~~~~~i~gg~~---~~~~~~~~~~~~~~st~~GGGa~le~l~g~~lPgv~aL~~ 214 (420)
+++.++ +||+||++ ++.++|+.++++|+|| ||||+||||+|+.+|++++|.+
T Consensus 341 ~t~~~~-~sivGGGDt~aav~~~g~~d~~shiST--GGGA~Le~LeGk~LPgv~aL~~ 395 (398)
T 1vpe_A 341 LTEKGA-ITVVGGGDSAAAVNKFGLEDKFSHVST--GGGASLEFLEGKELPGIASMRI 395 (398)
T ss_dssp HHHTTC-EEEEESHHHHHHHHHTTCGGGSSEEES--CHHHHHHHHTSSCCHHHHTSCB
T ss_pred hccCCC-EEEECCcHHHHHHHHcCCcCCccEEeC--ChHHHHHHHcCCCCcHHHHHHh
Confidence 764434 88888875 4457889899999999 8999999999999999999975
No 3
>3oz7_A Phosphoglycerate kinase; transferase, ATP binding, glycolysi malaria parasite; 2.70A {Plasmodium falciparum} SCOP: c.86.1.1 PDB: 1ltk_A* 3oza_A
Probab=100.00 E-value=6.9e-65 Score=503.41 Aligned_cols=210 Identities=24% Similarity=0.472 Sum_probs=195.8
Q ss_pred CCCCCCcEEEEEcCCccchHHHHHHHHHHhcCeEEEehHHHHHHHHh-cCCCCCCcccccCchHHHHHHHHHHhhCCCee
Q 014711 2 AKLDEKPYAAIIGGGNLCNKAAALHFLASRCDGLIFVGLMSFQIMHA-LGLPVPPELVEKGANDAASDLIQFARDKHITI 80 (420)
Q Consensus 2 ~~~~~~p~~~i~GG~kv~dki~~~~~l~~~~d~i~~gG~~a~~fl~a-~g~~ig~s~~e~~~~~~a~~~~~~~~~~~~~i 80 (420)
+++|+||+++|+|||||||||.+|+||+++||+|||||+||||||+| +|++||+|++|++.++.|++|+++|+++|++|
T Consensus 202 l~~p~rP~vaIlGGaKVsdKi~vi~nLl~kvD~liiGGgma~tFl~A~~G~~iG~Sl~e~d~~~~a~~il~~a~~~g~~i 281 (417)
T 3oz7_A 202 LENPQRPLLAILGGAKVSDKIQLIKNLLDKVDRMIIGGGMAYTFKKVLNNMKIGTSLFDEAGSKIVGEIMEKAKAKNVQI 281 (417)
T ss_dssp HTSCCSSEEEEEECSCSTTSHHHHHHHHTTCSEEEEETTHHHHHHHHHHCCCBTTSCCCTTTHHHHHHHHHHHHHTTCEE
T ss_pred HcCCCCceEEEEeCccHHHHHHHHHHHHHhcCEEEeccHHHHHHHHHHcCCccCchhcCccChHHHHHHHHHHHHcCCEE
Confidence 57999999999999999999999999999999999999999999999 89999999999999999999999999999999
Q ss_pred ecceeEEEecCC-CCCceeEe-cCCCCCCCCCcccCCcccHHHHHHHhcCCCeEEEeccceEEEcCCCCchHHHHHHHHH
Q 014711 81 LYPKDFWCTKIH-HPNQVEIF-PSHGIPDGWEPVDIGPRSVEEITSTITKCKKVIWVGPVKFRFSSQYSNGASKLTGMLC 158 (420)
Q Consensus 81 ~lP~D~~~~~~~-~~~~~~~~-~~~~i~~~~~~~DiGp~T~~~~~~~~~~~~~i~wnGp~G~~e~~~f~~GT~~l~~~~a 158 (420)
+||+|++|++++ .+.+..++ +.++||++||++||||+|++.|++.+..|+||+|||||||||+++|+.||++++++++
T Consensus 282 ~LPvD~vva~~f~~~a~~~~~~~~~~Ip~~~m~lDiGp~T~~~~~~~i~~akTIvWNGP~GvFE~~~Fa~GT~~va~aia 361 (417)
T 3oz7_A 282 FLPVDFKIADNFDNNANTKFVTDEEGIPDNWMGLDAGPKSIENYKDVILTSKTVIWNGPQGVFEMPNFAKGSIECLNLVV 361 (417)
T ss_dssp ECCSEEEEESSSSTTSCEEEEESSSCBCTTCEEEEECHHHHHHHHHHHHTCSEEEEESCSBCTTSSTTTHHHHHHHHHHH
T ss_pred ECCceeEEeecccCCCCeEEecccccCCCCCeeeecCHHHHHHHHHHHHhCCEEEEECCCccccccchhHHHHHHHHHHH
Confidence 999999999887 45566666 6899999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCCCeeEechhH---HHHHhhcCCCcceeeeecCCCeeeeeeccccCCCcccccc
Q 014711 159 KVSQGTCNVTVIGSMA---CKAIAKVSSSIFGLNMVESGSAVWEFLKGRMLPGVSALDR 214 (420)
Q Consensus 159 ~~~~~~~~~~i~gg~~---~~~~~~~~~~~~~~st~~GGGa~le~l~g~~lPgv~aL~~ 214 (420)
++|++++ +||+||++ ++..+|+.++++|+|| ||||+|+||+|+.+|++++|.+
T Consensus 362 ~~t~~~a-~sIvGGGDt~aav~~~g~~d~~shiST--GGGA~Le~LeGk~LPgv~aL~~ 417 (417)
T 3oz7_A 362 EVTKKGA-ITIVGGGDTASLVEQQNKKNEISHVST--GGGASLELLEGKELPGVLALSN 417 (417)
T ss_dssp HHHHHTC-EEEECSHHHHHHHHHTTCGGGSSEECS--CSHHHHHHHTTCCCHHHHTSCC
T ss_pred hhccCCC-EEEEcCcHHHHHHHHcCCcCCccEEcC--ChHHHHHHHcCCCCcceeeccC
Confidence 9765444 78888875 4457899899999999 9999999999999999998863
No 4
>1v6s_A Phosphoglycerate kinase; riken structu genomics/proteomics initiative, RSGI, structural genomics, transferase; 1.50A {Thermus thermophilus} SCOP: c.86.1.1 PDB: 2ie8_A
Probab=100.00 E-value=7.6e-65 Score=499.31 Aligned_cols=208 Identities=26% Similarity=0.461 Sum_probs=194.5
Q ss_pred CCCCCCCcEEEEEcCCccchHHHHHHHHHHhcCeEEEehHHHHHHHHhcCCCCCCcccccCchHHHHHHHHHHhhCCCee
Q 014711 1 MAKLDEKPYAAIIGGGNLCNKAAALHFLASRCDGLIFVGLMSFQIMHALGLPVPPELVEKGANDAASDLIQFARDKHITI 80 (420)
Q Consensus 1 ~~~~~~~p~~~i~GG~kv~dki~~~~~l~~~~d~i~~gG~~a~~fl~a~g~~ig~s~~e~~~~~~a~~~~~~~~~~~~~i 80 (420)
.+++|+||+++|+|||||||||++|+||++|||+|||||+||||||+|+|++||+|++|++.++.|++|+++++++|++|
T Consensus 178 ~l~~p~rP~vaIlGGaKVsdKi~vi~nLl~kvD~liiGGgma~tFl~A~G~~iG~Sl~E~d~~~~a~~ll~~a~~~g~~i 257 (390)
T 1v6s_A 178 LLKDPERPYAVVLGGAKVSDKIGVIESLLPRIDRLLIGGAMAFTFLKALGGEVGRSLVEEDRLDLAKDLLGRAEALGVRV 257 (390)
T ss_dssp TTSSCCSSEEEEECCSCGGGTHHHHHHHGGGCSEEEECSTTHHHHHHHTTCBCTTCCCCGGGHHHHHHHHHHHHHHTCEE
T ss_pred HhcCCCCCeEEEEcCCchhhHHHHHHHHHHHhccceeCcHHHHHHHHHcCCCCCccccchhhHHHHHHHHHHHHHcCCEE
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecceeEEEecCC-CCCceeEecCCCCCCCCCcccCCcccHHHHHHHhcCCCeEEEeccceEEEcCCCCchHHHHHHHHHh
Q 014711 81 LYPKDFWCTKIH-HPNQVEIFPSHGIPDGWEPVDIGPRSVEEITSTITKCKKVIWVGPVKFRFSSQYSNGASKLTGMLCK 159 (420)
Q Consensus 81 ~lP~D~~~~~~~-~~~~~~~~~~~~i~~~~~~~DiGp~T~~~~~~~~~~~~~i~wnGp~G~~e~~~f~~GT~~l~~~~a~ 159 (420)
+||+|++|++++ .+.+..+++.++||++||++||||+|++.|++.+..|+||+|||||||||.++|+.||+++++++++
T Consensus 258 ~lPvD~vva~~f~~~a~~~~~~~~~ip~~~m~lDiGp~T~~~~~~~i~~akTivWNGPmGvFE~~~Fa~GT~~va~aia~ 337 (390)
T 1v6s_A 258 YLPEDVVAAERIEAGVETRVFPARAIPVPYMGLDIGPKTREAFARALEGARTVFWNGPMGVFEVPPFDEGTLAVGQAIAA 337 (390)
T ss_dssp ECCSEEEEESSCCTTCCCEEEETTBCCTTCEEEEECHHHHHHHHHHTTTCSEEEEESCSSCTTSTTTTHHHHHHHHHHHT
T ss_pred ECCcChhhhhccCCCCceEEeehhcCCCCCEeeecCHHHHHHHHHHHhhCCEEEEeCCcccccCchHHHHHHHHHHHHHh
Confidence 999999999986 4555667889999999999999999999999999999999999999999999999999999999998
Q ss_pred hhcCCCCeeEechhH---HHHHhhcCCCcceeeeecCCCeeeeeeccccCCCccccc
Q 014711 160 VSQGTCNVTVIGSMA---CKAIAKVSSSIFGLNMVESGSAVWEFLKGRMLPGVSALD 213 (420)
Q Consensus 160 ~~~~~~~~~i~gg~~---~~~~~~~~~~~~~~st~~GGGa~le~l~g~~lPgv~aL~ 213 (420)
++ ++ +||+||++ ++..+|+.++++|+|| ||||+||||+|+.+|++++|.
T Consensus 338 ~~--~~-~sivGGGDt~aav~~~g~~d~~shiST--GGGA~Le~LeGk~LPgv~aL~ 389 (390)
T 1v6s_A 338 LE--GA-FTVVGGGDSVAAVNRLGLKERFGHVST--GGGASLEFLEKGTLPGLEVLE 389 (390)
T ss_dssp CS--SC-EEEEESHHHHHHHHTTTCGGGSSEECC--SSSHHHHHHHHSCCHHHHTTC
T ss_pred cC--CC-EEEECChHHHHHHHHcCCccCceEEeC--ChHHHHHHHcCCCcchHHHhc
Confidence 53 23 88888875 4457888889999999 999999999999999999886
No 5
>1fw8_A PGK P72, phosphoglycerate kinase; phosphotransferase, glycoly mutant, permutation, permuted sequence, protein foldin domain protein; 2.30A {Saccharomyces cerevisiae} SCOP: c.86.1.1
Probab=100.00 E-value=5e-65 Score=504.25 Aligned_cols=212 Identities=25% Similarity=0.458 Sum_probs=197.2
Q ss_pred CCCCCCcEEEEEcCCccchHHHHHHHHHHhcCeEEEehHHHHHHHHhcCCC-CCCcccccCchHHHHHHHHHHhhCCCee
Q 014711 2 AKLDEKPYAAIIGGGNLCNKAAALHFLASRCDGLIFVGLMSFQIMHALGLP-VPPELVEKGANDAASDLIQFARDKHITI 80 (420)
Q Consensus 2 ~~~~~~p~~~i~GG~kv~dki~~~~~l~~~~d~i~~gG~~a~~fl~a~g~~-ig~s~~e~~~~~~a~~~~~~~~~~~~~i 80 (420)
+++|+||+++|+|||||||||++|+||++|||+|||||+||||||+|+|++ ||+|++|++.++.|++|+++|+++|++|
T Consensus 128 l~~p~rP~vaIlGGaKVsdKi~vi~nLl~kvD~liiGGgma~TFl~A~G~~~IG~SL~E~d~~~~a~~ll~kak~~g~~i 207 (416)
T 1fw8_A 128 LENPTRPFLAILGGAKVADKIQLIDNLLDKVDSIIIGGGMAFTFKKVLENTEIGDSIFDKAGAEIVPKLMEKAKAKGVEV 207 (416)
T ss_dssp HHSCCSSEEEEEECSCSTTTHHHHHHHHTTCSEEEEEGGGHHHHHHHHSCCCCCSCCCCHHHHHHHHHHHHHHHHHTCEE
T ss_pred HcCCCCCeEEEEcCcchhhHHHHHHHHHHhhCeeEeChHHHHHHHHHcCCCccCccccChhhHHHHHHHHHHHHhcCCEE
Confidence 579999999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred ecceeEEEecCC-CCCceeE-ecCCCCCCCCCcccCCcccHHHHHHHhcCCCeEEEeccceEEEcCCCCchHHHHHHHHH
Q 014711 81 LYPKDFWCTKIH-HPNQVEI-FPSHGIPDGWEPVDIGPRSVEEITSTITKCKKVIWVGPVKFRFSSQYSNGASKLTGMLC 158 (420)
Q Consensus 81 ~lP~D~~~~~~~-~~~~~~~-~~~~~i~~~~~~~DiGp~T~~~~~~~~~~~~~i~wnGp~G~~e~~~f~~GT~~l~~~~a 158 (420)
+||+|++|++++ .+.+..+ ++.++||+|||++||||+|++.|++.|..|+||+|||||||||+++|+.||++++++++
T Consensus 208 ~lPvD~vva~~f~~~a~~~~~~~~~~Ip~~~m~lDIGp~T~~~~~~~i~~akTIvWNGPmGVFE~~~Fa~GT~~va~aia 287 (416)
T 1fw8_A 208 VLPVDFIIADAFSADANTKTVTDKEGIPAGWQGLDNGPESRKLFAATVAKAKTIVWNGPPGVFEFEKFAAGTKALLDEVV 287 (416)
T ss_dssp ECCSEEEEESSSSTTCCEEEEETTTCCCTTCEEEEECHHHHHHHHHHHHHCSEEEEESCSSCTTSGGGCHHHHHHHHHHH
T ss_pred ECCceEEEeeccCCCCCeEEecchhcCCCCCEEEecCHHHHHHHHHHHhhCCEEEEECCCccccCchHHHHHHHHHHHHH
Confidence 999999999986 4455556 78899999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCCCeeEechhH---HHHHhhcCCCcceeeeecCCCeeeeeeccccCCCccccccCC
Q 014711 159 KVSQGTCNVTVIGSMA---CKAIAKVSSSIFGLNMVESGSAVWEFLKGRMLPGVSALDRAF 216 (420)
Q Consensus 159 ~~~~~~~~~~i~gg~~---~~~~~~~~~~~~~~st~~GGGa~le~l~g~~lPgv~aL~~~~ 216 (420)
++++.+ .+||+||++ ++..+|+.++++|+|| ||||+||||+|+.+|++++|.+..
T Consensus 288 ~~~~~~-a~sIvGGGDt~aav~~~G~~d~~shiST--GGGA~LE~LEGk~LPgV~aL~~~~ 345 (416)
T 1fw8_A 288 KSSAAG-NTVIIGGGDTATVAKKYGVTDKISHVST--GGGASLELLEGKELPGVAFLSEKK 345 (416)
T ss_dssp HHHHTT-CEEEECTTHHHHHHHHTTCGGGSSEECS--CSHHHHHHHTTCCCHHHHTSCSSC
T ss_pred hhccCC-CEEEEcCcHHHHHHHHcCCCCCcceecc--ccceehHhhcCCCChHHHHHHhcc
Confidence 975433 388888875 4567899899999999 899999999999999999998653
No 6
>1qpg_A PGK, 3-phosphoglycerate kinase; phosphotransferase (carboxyl acceptor), acetylation, glycolysis; HET: MAP 3PG; 2.40A {Saccharomyces cerevisiae} SCOP: c.86.1.1 PDB: 3pgk_A*
Probab=100.00 E-value=5.3e-65 Score=503.97 Aligned_cols=210 Identities=25% Similarity=0.459 Sum_probs=195.5
Q ss_pred CCCCCCcEEEEEcCCccchHHHHHHHHHHhcCeEEEehHHHHHHHHhcCCC-CCCcccccCchHHHHHHHHHHhhCCCee
Q 014711 2 AKLDEKPYAAIIGGGNLCNKAAALHFLASRCDGLIFVGLMSFQIMHALGLP-VPPELVEKGANDAASDLIQFARDKHITI 80 (420)
Q Consensus 2 ~~~~~~p~~~i~GG~kv~dki~~~~~l~~~~d~i~~gG~~a~~fl~a~g~~-ig~s~~e~~~~~~a~~~~~~~~~~~~~i 80 (420)
+++|+||+++|+|||||||||.+|+||++|||+|||||+||||||+|+|++ ||+|++|++.++.|++|+++|+++|++|
T Consensus 198 l~~p~rP~vaIlGGaKVsdKi~vi~nLl~kvD~liiGGgma~TFl~A~G~~~iG~Sl~E~d~~~~a~~ll~ka~~~g~~i 277 (415)
T 1qpg_A 198 LENPTRPFLAILGGAKVADKIQLIDNLLDKVDSIIIGGGMAFTFKKVLENTEIGDSIFDKAGAEIVPKLMEKAKAKGVEV 277 (415)
T ss_dssp HSSCCSSEEEEECSSCSGGGHHHHHHHTTTCSEEEECGGGHHHHHHHHSCCCCCSCCCCHHHHHHHHHHHHHHHHHTCEE
T ss_pred hcCCCCCeEEEEcCcchhhHHHHHHHHHHhcCEEEeChHHHHHHHHHcCCCcccchhcChhhHHHHHHHHHHHHHcCCEE
Confidence 579999999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred ecceeEEEecCC-CCCceeE-ecCCCCCCCCCcccCCcccHHHHHHHhcCCCeEEEeccceEEEcCCCCchHHHHHHHHH
Q 014711 81 LYPKDFWCTKIH-HPNQVEI-FPSHGIPDGWEPVDIGPRSVEEITSTITKCKKVIWVGPVKFRFSSQYSNGASKLTGMLC 158 (420)
Q Consensus 81 ~lP~D~~~~~~~-~~~~~~~-~~~~~i~~~~~~~DiGp~T~~~~~~~~~~~~~i~wnGp~G~~e~~~f~~GT~~l~~~~a 158 (420)
+||+|++|++++ .+.+..+ ++.++||+|||++||||+|++.|+++|..|+||+|||||||||+++|+.||++++++++
T Consensus 278 ~lPvD~vva~~f~~~a~~~~~~~~~~Ip~~~m~lDiGp~T~~~~~~~i~~akTIvWNGPmGvFE~~~Fa~GT~~va~aia 357 (415)
T 1qpg_A 278 VLPVDFIIADAFSADANTKTVTDKEGIPAGWQGLDNGPESRKLFAATVAKAKTIVWNGPPGVFEFEKFAAGTKALLDEVV 357 (415)
T ss_dssp ECCSEEEEESSSSSSCCCCEEETTTCCCTTCEEEEECHHHHHHHHHHHTTCSEEEEESCSSCTTSGGGCHHHHHHHHHHH
T ss_pred ECCcchhhhhccCCCCCeEEecchhcCCCCCeeeccCHHHHHHHHHHHhhCCEEEEeCCccccccchHHHHHHHHHHHHH
Confidence 999999999986 3444455 78899999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCCCeeEechhH---HHHHhhcCCCcceeeeecCCCeeeeeeccccCCCcccccc
Q 014711 159 KVSQGTCNVTVIGSMA---CKAIAKVSSSIFGLNMVESGSAVWEFLKGRMLPGVSALDR 214 (420)
Q Consensus 159 ~~~~~~~~~~i~gg~~---~~~~~~~~~~~~~~st~~GGGa~le~l~g~~lPgv~aL~~ 214 (420)
++++.++ +||+||++ ++..+|+.++++|+|| ||||+|+||+|+.+|++++|.+
T Consensus 358 ~~t~~~a-~sIvGGGDt~aav~~~g~~d~~shiST--GGGA~Le~LEGk~LPgv~aL~~ 413 (415)
T 1qpg_A 358 KSSAAGN-TVIIGGGDTATVAKKYGVTDKISHVST--GGGASLELLEGKELPGVAFLSE 413 (415)
T ss_dssp HHHHHTC-EEEECCHHHHHHHHHTTCGGGSSEECC--CTHHHHHHHTSCCCHHHHTSCB
T ss_pred hhccCCC-EEEECCcHHHHHHHHcCCCCCceEEeC--ChHHHHHHHcCCCCchHHHhhc
Confidence 9754333 78888875 4567899899999999 9999999999999999999875
No 7
>3q3v_A Phosphoglycerate kinase; structural genomics, center for structural genomics of infec diseases, csgid, PGK; HET: PGE; 2.15A {Campylobacter jejuni subsp} SCOP: c.86.1.0
Probab=100.00 E-value=6.6e-65 Score=500.76 Aligned_cols=208 Identities=27% Similarity=0.486 Sum_probs=194.8
Q ss_pred CCCCCCcEEEEEcCCccchHHHHHHHHHHhcCeEEEehHHHHHHHHhcCCCCCCcccccCchHHHHHHHHHHhhCCCeee
Q 014711 2 AKLDEKPYAAIIGGGNLCNKAAALHFLASRCDGLIFVGLMSFQIMHALGLPVPPELVEKGANDAASDLIQFARDKHITIL 81 (420)
Q Consensus 2 ~~~~~~p~~~i~GG~kv~dki~~~~~l~~~~d~i~~gG~~a~~fl~a~g~~ig~s~~e~~~~~~a~~~~~~~~~~~~~i~ 81 (420)
+++|+||+++|+|||||||||.+|+||+++||+|||||+||||||+|+|++||+|++|++.++.|++|+++|+++|++|+
T Consensus 189 l~~p~rP~vaIlGGaKVsdKi~vi~nLl~kvD~liiGGgma~tFl~A~G~~iG~Sl~e~d~~~~a~~ll~~a~~~g~~i~ 268 (403)
T 3q3v_A 189 IKHPARPFVAVVGGSKVSGKLQALTNLLPKVDKLIIGGGMAFTFLKALGYDIGNSLLEEELLEEANKILTKGKNLGVKIY 268 (403)
T ss_dssp TTCCCSSEEEEECSSCHHHHHHHHHHHTTTCSEEEECSTTHHHHHHHTTCCCTTSCCCGGGHHHHHHHHHHHHHTTCEEE
T ss_pred HcCCCCceEEEEeCccHHHHHHHHHHHHHhcCEEEECcHHHHHHHHHcCCCcCccccchhhHHHHHHHHHHHHHcCCEEE
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeEEEecCC-CCCceeEecCCCCCCCCCcccCCcccHHHHHHHhcCCCeEEEeccceEEEcCCCCchHHHHHHHHHhh
Q 014711 82 YPKDFWCTKIH-HPNQVEIFPSHGIPDGWEPVDIGPRSVEEITSTITKCKKVIWVGPVKFRFSSQYSNGASKLTGMLCKV 160 (420)
Q Consensus 82 lP~D~~~~~~~-~~~~~~~~~~~~i~~~~~~~DiGp~T~~~~~~~~~~~~~i~wnGp~G~~e~~~f~~GT~~l~~~~a~~ 160 (420)
||+|++|++++ .+.+..++++++||++||++||||+|++.|++++..|+||+||||||+||.++|+.||++++++++++
T Consensus 269 LPvD~vva~~f~~~a~~~~~~~~~ip~~~m~lDIGp~T~~~~~~~i~~akTIvWNGP~GvFE~~~Fa~GT~~va~aia~~ 348 (403)
T 3q3v_A 269 LPVDVVAAPACSQDVPMKFVPAQEIPNGWMGLDIGPASVRLFKEVISDAQTIWWNGPMGVFEIDKFSKGSIKMSHYISEG 348 (403)
T ss_dssp CCSEEEEESSSSTTSCCEEEEGGGCCTTCEEEEECHHHHHHHHHHHTTCSEEEEESCSSCTTSGGGCHHHHHHHHHHHHS
T ss_pred CCceEEEeeccCCCCceEEEecccCCCCCEeeecChHHHHHHHHHHHhCCEEEEECCCccccccchhHHHHHHHHHHHhc
Confidence 99999999886 45566677889999999999999999999999999999999999999999999999999999999885
Q ss_pred hcCCCCeeEechhH---HHHHhhcCCCcceeeeecCCCeeeeeeccccCCCccccccC
Q 014711 161 SQGTCNVTVIGSMA---CKAIAKVSSSIFGLNMVESGSAVWEFLKGRMLPGVSALDRA 215 (420)
Q Consensus 161 ~~~~~~~~i~gg~~---~~~~~~~~~~~~~~st~~GGGa~le~l~g~~lPgv~aL~~~ 215 (420)
. .+||+||++ ++..+|+.++++|+|| ||||+|+||+|+.+|++++|.+.
T Consensus 349 ~----a~sIvGGGDt~aav~~~g~~d~~shiST--GGGA~Le~LeGk~LPgv~aL~~~ 400 (403)
T 3q3v_A 349 H----ATSVVGGGDTADVVARAGDADEMTFIST--GGGASLELIEGKELPGVKALRSK 400 (403)
T ss_dssp S----SEEEEESHHHHHHHHHTTCGGGSSEECC--CHHHHHHHHTTCCCHHHHTTBC-
T ss_pred C----CEEEECCcHHHHHHHHcCCcCCccEEcC--ChHHHHHHHcCCCCcHHHHHhhh
Confidence 3 488888875 4457889899999999 89999999999999999999763
No 8
>1php_A 3-phosphoglycerate kinase; HET: ADP; 1.65A {Geobacillus stearothermophilus} SCOP: c.86.1.1 PDB: 3b2b_A* 3uwd_A*
Probab=100.00 E-value=1e-64 Score=499.04 Aligned_cols=208 Identities=26% Similarity=0.491 Sum_probs=194.7
Q ss_pred CCCCCCcEEEEEcCCccchHHHHHHHHHHhcCeEEEehHHHHHHHHhcCCCCCCcccccCchHHHHHHHHHHhhCCCeee
Q 014711 2 AKLDEKPYAAIIGGGNLCNKAAALHFLASRCDGLIFVGLMSFQIMHALGLPVPPELVEKGANDAASDLIQFARDKHITIL 81 (420)
Q Consensus 2 ~~~~~~p~~~i~GG~kv~dki~~~~~l~~~~d~i~~gG~~a~~fl~a~g~~ig~s~~e~~~~~~a~~~~~~~~~~~~~i~ 81 (420)
+++|+||+++|+|||||||||.+|+||++|||+|||||+||||||+|+|++||+|++|++.++.|++|+++++++|++|+
T Consensus 182 l~~p~rP~vaIlGGaKVsdKi~vi~nLl~kvD~liiGGgma~tFl~A~G~~iG~SL~E~d~~~~a~~ll~~a~~~g~~i~ 261 (394)
T 1php_A 182 LSNPDRPFTAIIGGAKVKDKIGVIDNLLEKVDNLIIGGGLAYTFVKALGHDVGKSLLEEDKIELAKSFMEKAKEKGVRFY 261 (394)
T ss_dssp HHSCCSSEEEEECSSCHHHHHHHHHHHTTTCSEEEECTTHHHHHHHHTTCCCTTSCCCGGGHHHHHHHHHHHHHHTCEEE
T ss_pred hcCCCCCeEEEEcCcchhhHHHHHHHHHHhcCeeeeCcHHHHHHHHHcCCCCCccccchhhHHHHHHHHHHHHhcCCEEE
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeEEEecCC-CCCceeEecCCCCCCCCCcccCCcccHHHHHHHhcCCCeEEEeccceEEEcCCCCchHHHHHHHHHhh
Q 014711 82 YPKDFWCTKIH-HPNQVEIFPSHGIPDGWEPVDIGPRSVEEITSTITKCKKVIWVGPVKFRFSSQYSNGASKLTGMLCKV 160 (420)
Q Consensus 82 lP~D~~~~~~~-~~~~~~~~~~~~i~~~~~~~DiGp~T~~~~~~~~~~~~~i~wnGp~G~~e~~~f~~GT~~l~~~~a~~ 160 (420)
||+|++|++++ .+.+..+++.++||+|||++||||+|++.|++.+..|+||+|||||||||.++|+.||++++++++++
T Consensus 262 lPvD~vva~~f~~~a~~~~~~~~~ip~~~m~lDiGp~T~~~~~~~i~~akTivWNGPmGvFE~~~Fa~GT~~va~aia~~ 341 (394)
T 1php_A 262 MPVDVVVADRFANDANTKVVPIDAIPADWSALDIGPKTRELYRDVIRESKLVVWNGPMGVFEMDAFAHGTKAIAEALAEA 341 (394)
T ss_dssp CCSEEEEESSSSTTSCEEEEEGGGCCTTCEEEEECHHHHHHHHHHHHTCSEEEEESCSSCTTSGGGCHHHHHHHHHHHHC
T ss_pred CCcchhhhhccCCCCceEEeehhcCCCCCEeeecCHHHHHHHHHHHhhCCEEEEeCCcccccCchHHHHHHHHHHHHHhc
Confidence 99999999987 45566678889999999999999999999999999999999999999999999999999999999985
Q ss_pred hcCCCCeeEechhH---HHHHhhcCCCcceeeeecCCCeeeeeeccccCCCcccccc
Q 014711 161 SQGTCNVTVIGSMA---CKAIAKVSSSIFGLNMVESGSAVWEFLKGRMLPGVSALDR 214 (420)
Q Consensus 161 ~~~~~~~~i~gg~~---~~~~~~~~~~~~~~st~~GGGa~le~l~g~~lPgv~aL~~ 214 (420)
. + .+||+||++ ++..+|+.++++|+|| ||||+||||+|+.+|++++|.+
T Consensus 342 ~--~-~~sivGGGDt~aav~~~g~~d~~shiST--GGGA~Le~LeGk~LPgv~aL~~ 393 (394)
T 1php_A 342 L--D-TYSVIGGGDSAAAVEKFGLADKMDHIST--GGGASLEFMEGKQLPGVVALED 393 (394)
T ss_dssp T--T-CEEEECSHHHHHHHHHTTCGGGSSEECS--CTHHHHHHHTTCCCHHHHTSCB
T ss_pred C--C-CEEEECChHHHHHHHHcCCCCCccEEeC--ChHHHHHHHcCCCcchHHHhhc
Confidence 2 2 388888875 4457889899999999 9999999999999999999864
No 9
>4fey_A Phosphoglycerate kinase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: ADP; 2.30A {Francisella tularensis subsp} PDB: 4ehj_A
Probab=100.00 E-value=8.4e-65 Score=498.89 Aligned_cols=208 Identities=24% Similarity=0.353 Sum_probs=194.8
Q ss_pred CCCCCCcEEEEEcCCccchHHHHHHHHHHhcCeEEEehHHHHHHHHhcCCCCCCcccccCchHHHHHHHHHHhhCCCeee
Q 014711 2 AKLDEKPYAAIIGGGNLCNKAAALHFLASRCDGLIFVGLMSFQIMHALGLPVPPELVEKGANDAASDLIQFARDKHITIL 81 (420)
Q Consensus 2 ~~~~~~p~~~i~GG~kv~dki~~~~~l~~~~d~i~~gG~~a~~fl~a~g~~ig~s~~e~~~~~~a~~~~~~~~~~~~~i~ 81 (420)
+++|+||+++|+|||||||||.+|+||+++||+|||||+||||||+|+|++||+|++|++.++.|++|+++|+++|++|+
T Consensus 181 l~~p~rP~vaIlGGaKVsdKi~vi~nLl~kvD~liiGGgma~tFl~A~G~~iG~Sl~E~d~~~~a~~il~~a~~~g~~i~ 260 (395)
T 4fey_A 181 LKSPKKPMAAIVGGSKVSTKLSVLNNLLDKVEILIVGGGIANTFIKAEGFDVGNSLYEQDLVAEATEILAKAKALGVNIP 260 (395)
T ss_dssp HTSCCSSEEEEEEESCHHHHHHHHHHHTTTCSEEEEEEHHHHHHHHHTTCCCTTCCCCGGGHHHHHHHHHHHHHTTCBCC
T ss_pred hcCCCCceEEEEeCccHHHHHHHHHHHHHhcCEEEEChHHHHHHHHHcCCccCccccchhhHHHHHHHHHHHHHcCCEEE
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeEEEecCC-CCCceeEecCCCCCCCCCcccCCcccHHHHHHHhcCCCeEEEeccceEEEcCCCCchHHHHHHHHHhh
Q 014711 82 YPKDFWCTKIH-HPNQVEIFPSHGIPDGWEPVDIGPRSVEEITSTITKCKKVIWVGPVKFRFSSQYSNGASKLTGMLCKV 160 (420)
Q Consensus 82 lP~D~~~~~~~-~~~~~~~~~~~~i~~~~~~~DiGp~T~~~~~~~~~~~~~i~wnGp~G~~e~~~f~~GT~~l~~~~a~~ 160 (420)
||+|++|++++ .+.+..++++++||++||++||||+|++.|++.+..|+||+|||||||||.++|+.||+++++++++.
T Consensus 261 LPvD~vva~~f~~~a~~~~~~~~~ip~~~m~lDiGp~T~~~~~~~i~~akTIvWNGP~GvFE~~~Fa~GT~~va~aia~~ 340 (395)
T 4fey_A 261 VPVDVRVAKEFSENAQAIIKKVSDVVADEMILDIGPESQKIIAELLKSANTILWNGPVGVFEFDNFAEGTKALSLAIAQS 340 (395)
T ss_dssp CCSEEEEESSSSTTCCCEEEEGGGCCTTCEEEEECHHHHHHHHHHHHHCSEEEEECCSSCTTSGGGCHHHHHHHHHHHHH
T ss_pred ccceEEEeccccCCCceEEEEcccCCCCCcceecChHHHHHHHHHHHhCCEEEEECCCCccccchhhHHHHHHHHHHHhc
Confidence 99999999886 45566677889999999999999999999999999999999999999999999999999999999885
Q ss_pred hcCCCCeeEechhH---HHHHhhcCCCcceeeeecCCCeeeeeeccccCCCccccccC
Q 014711 161 SQGTCNVTVIGSMA---CKAIAKVSSSIFGLNMVESGSAVWEFLKGRMLPGVSALDRA 215 (420)
Q Consensus 161 ~~~~~~~~i~gg~~---~~~~~~~~~~~~~~st~~GGGa~le~l~g~~lPgv~aL~~~ 215 (420)
..+||+||++ ++..+|+.++++|+|| ||||+++||+|+.+|++++|.+.
T Consensus 341 ----~a~sivGGGDt~aav~~~g~~d~~shiST--GGGA~Le~LeGk~LPgv~aL~~~ 392 (395)
T 4fey_A 341 ----HAFSVAGGGDTIAAIEKFGIKDQVSYIST--AGGAFLEFLEGKKLPAIEILKEK 392 (395)
T ss_dssp ----CSEEEEESHHHHHHHHHTTCSTTSSEEEC--CSHHHHHHHTTCCCHHHHHHHHT
T ss_pred ----CCeEEECCcHHHHHHHHcCCcCCceEEcC--ChHHHHHHHcCCCchHHHHHHhh
Confidence 2488888875 4457899999999999 99999999999999999998753
No 10
>2wzb_A Phosphoglycerate kinase 1; hereditary hemolytic anemia, transferase, phosphoprotein, KI glycolysis, nucleotide-binding; HET: ADP 3PG; 1.47A {Homo sapiens} PDB: 2wzc_A* 2x13_A* 2x15_A* 2xe6_A* 2xe7_A* 2xe8_A* 2ybe_A* 3c3b_A* 2zgv_A* 3c3a_A* 3c39_A* 3c3c_A* 2wzd_A* 2x14_A* 2y3i_A* 1vjd_A* 1vjc_A* 1kf0_A* 1hdi_A* 2p9t_A* ...
Probab=100.00 E-value=6.5e-65 Score=503.44 Aligned_cols=210 Identities=26% Similarity=0.508 Sum_probs=195.8
Q ss_pred CCCCCCcEEEEEcCCccchHHHHHHHHHHhcCeEEEehHHHHHHHHhcCCC-CCCcccccCchHHHHHHHHHHhhCCCee
Q 014711 2 AKLDEKPYAAIIGGGNLCNKAAALHFLASRCDGLIFVGLMSFQIMHALGLP-VPPELVEKGANDAASDLIQFARDKHITI 80 (420)
Q Consensus 2 ~~~~~~p~~~i~GG~kv~dki~~~~~l~~~~d~i~~gG~~a~~fl~a~g~~-ig~s~~e~~~~~~a~~~~~~~~~~~~~i 80 (420)
+++|+||+++|+|||||||||.+|+||++|||+|||||+||||||+|+|++ ||+|++|++.++.|++|+++|+++|++|
T Consensus 200 l~~p~rP~vaIlGGaKVsdKi~vi~nLl~kvD~liiGGgma~TFl~A~G~~~iG~Sl~E~d~~~~a~~ll~ka~~~g~~i 279 (416)
T 2wzb_A 200 LESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMAFTFLKVLNNMEIGTSLFDEEGAKIVKDLMSKAEKNGVKI 279 (416)
T ss_dssp HHSCCSSEEEEECSSCHHHHGGGHHHHTTTCSEEEECGGGHHHHHHHHHCCCCTTSCCCHHHHTTHHHHHHHHHHTTCEE
T ss_pred hcCCCCCeEEEEcCcchhhHHHHHHHHHHhcCeeeeChHHHHHHHHHcCCCcccchhcChhhHHHHHHHHHHHHHcCCEE
Confidence 579999999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred ecceeEEEecCC-CCCceeE-ecCCCCCCCCCcccCCcccHHHHHHHhcCCCeEEEeccceEEEcCCCCchHHHHHHHHH
Q 014711 81 LYPKDFWCTKIH-HPNQVEI-FPSHGIPDGWEPVDIGPRSVEEITSTITKCKKVIWVGPVKFRFSSQYSNGASKLTGMLC 158 (420)
Q Consensus 81 ~lP~D~~~~~~~-~~~~~~~-~~~~~i~~~~~~~DiGp~T~~~~~~~~~~~~~i~wnGp~G~~e~~~f~~GT~~l~~~~a 158 (420)
+||+|++|++++ .+.+..+ ++.++||+|||++||||+|++.|+++|..|+||+|||||||||+++|+.||++++++++
T Consensus 280 ~lPvD~vva~~f~~~a~~~~~~~~~~Ip~~~m~lDiGp~T~~~~~~~i~~akTIvWNGPmGvFE~~~Fa~GT~~va~aia 359 (416)
T 2wzb_A 280 TLPVDFVTADKFDENAKTGQATVASGIPAGWMGLDCGPESSKKYAEAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVV 359 (416)
T ss_dssp ECCCEEEEESSSSTTCCEEEEETTTCCCTTCEEEEECHHHHHHHHHHHHHCSEEEEESCSSCTTSGGGCHHHHHHHHHHH
T ss_pred ECCcchhhhhccCCCCCeEEecchhcCCCCCeeeecCHHHHHHHHHHHhhCCEEEEECCCcccccchHHHHHHHHHHHHH
Confidence 999999999986 4455556 78899999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCCCeeEechhH---HHHHhhcCCCcceeeeecCCCeeeeeeccccCCCcccccc
Q 014711 159 KVSQGTCNVTVIGSMA---CKAIAKVSSSIFGLNMVESGSAVWEFLKGRMLPGVSALDR 214 (420)
Q Consensus 159 ~~~~~~~~~~i~gg~~---~~~~~~~~~~~~~~st~~GGGa~le~l~g~~lPgv~aL~~ 214 (420)
++++.++ +||+||++ ++..+|+.++++|+|| ||||+||||+|+.+|++++|.+
T Consensus 360 ~~t~~~a-~sIvGGGDt~aav~~~g~~d~~shiST--GGGA~Le~LEGk~LPgv~aL~~ 415 (416)
T 2wzb_A 360 KATSRGC-ITIIGGGDTATCCAKWNTEDKVSHVST--GGGASLELLEGKVLPGVDALSN 415 (416)
T ss_dssp HHHHTTC-EEEEESTTHHHHHHHTTCTTSSSEEES--CSHHHHHHHHTCCCHHHHTSCB
T ss_pred hhccCCC-EEEEcCcHHHHHHHHcCCCCCceEEeC--chHHHHHHHcCCCccHHHHHhc
Confidence 9764443 78888764 4568899999999999 9999999999999999998864
No 11
>1zmr_A Phosphoglycerate kinase; transferase, glycolysis; 2.40A {Escherichia coli}
Probab=100.00 E-value=5.4e-63 Score=484.92 Aligned_cols=202 Identities=23% Similarity=0.372 Sum_probs=188.3
Q ss_pred CCCCCCcEEEEEcCCccchHHHHHHHHHHhcCeEEEehHHHHHHHHhcCCCCCCcccccCchHHHHHHHHHHhhCCCeee
Q 014711 2 AKLDEKPYAAIIGGGNLCNKAAALHFLASRCDGLIFVGLMSFQIMHALGLPVPPELVEKGANDAASDLIQFARDKHITIL 81 (420)
Q Consensus 2 ~~~~~~p~~~i~GG~kv~dki~~~~~l~~~~d~i~~gG~~a~~fl~a~g~~ig~s~~e~~~~~~a~~~~~~~~~~~~~i~ 81 (420)
+++|+||+++|+|||||||||.+|+||++|||+|||||+||||||+|+|++||+|++|++.++.|++|+++ ++|+
T Consensus 178 l~~p~rP~vaIlGGaKVsdKi~vi~nLl~kvD~liiGGgma~tFl~A~G~~iG~Sl~E~d~~~~a~~ll~~-----~~i~ 252 (387)
T 1zmr_A 178 LKEPARPMVAIVGGSKVSTKLTVLDSLSKIADQLIVGGGIANTFIAAQGHDVGKSLYEADLVDEAKRLLTT-----CNIP 252 (387)
T ss_dssp HSSCSSSEEEEEEESCTTTTHHHHHHHHTTCSEEEEEEHHHHHHHHHTTCCCTTCSCCGGGHHHHHHHHTT-----SCCC
T ss_pred hcCCCCCeEEEEcCcchhhHHHHHHHHHHhcCEEEeCcHHHHHHHHHcCCCCCccccchhhHHHHHHHHHh-----CCcc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999975 8999
Q ss_pred cceeEEEecCC-CCCceeEecCCCCCCCCCcccCCcccHHHHHHHhcCCCeEEEeccceEEEcCCCCchHHHHHHHHHhh
Q 014711 82 YPKDFWCTKIH-HPNQVEIFPSHGIPDGWEPVDIGPRSVEEITSTITKCKKVIWVGPVKFRFSSQYSNGASKLTGMLCKV 160 (420)
Q Consensus 82 lP~D~~~~~~~-~~~~~~~~~~~~i~~~~~~~DiGp~T~~~~~~~~~~~~~i~wnGp~G~~e~~~f~~GT~~l~~~~a~~ 160 (420)
||+|++|++++ .+.+..+++.++||++||++||||+|++.|++.+..|+||+|||||||||.++|+.||++++++++++
T Consensus 253 lPvD~vva~~f~~~~~~~~~~~~~ip~~~m~lDiGp~T~~~~~~~i~~akTivWNGPmGvFE~~~Fa~GT~~va~aia~~ 332 (387)
T 1zmr_A 253 VPSDVRVATEFSETAPATLKSVNDVKADEQILDIGDASAQELAEILKNAKTILWNGPVGVFEFPNFRKGTEIVANAIADS 332 (387)
T ss_dssp CCSEEEEESSSSSSCCCEEEEGGGCCTTCEEEEECHHHHHHHHHHHHHCSEEEEESCSBCTTSGGGCHHHHHHHHHHHHS
T ss_pred CCccceeeeccCCCCceEEeehhhCCCCCEEeecCHHHHHHHHHHHhhCCEEEEECCcccccCchHHHHHHHHHHHHHhc
Confidence 99999999876 44555677889999999999999999999999999999999999999999999999999999999985
Q ss_pred hcCCCCeeEechhH---HHHHhhcCCCcceeeeecCCCeeeeeeccccCCCcccccc
Q 014711 161 SQGTCNVTVIGSMA---CKAIAKVSSSIFGLNMVESGSAVWEFLKGRMLPGVSALDR 214 (420)
Q Consensus 161 ~~~~~~~~i~gg~~---~~~~~~~~~~~~~~st~~GGGa~le~l~g~~lPgv~aL~~ 214 (420)
. .+||+||++ ++..+|+.++++|+|| ||||+||||+|+.+|++++|.+
T Consensus 333 ~----~~sivGGGDt~aav~~~g~~d~~shiST--GGGA~Le~LeGk~LPgv~aL~~ 383 (387)
T 1zmr_A 333 E----AFSIAGGGDTLAAIDLFGIADKISYIST--GGGAFLEFVEGKVLPAVAMLEE 383 (387)
T ss_dssp S----SEEEECSHHHHHHHHHHTCGGGSSEECC--CTHHHHHHHTTCCCHHHHHHHH
T ss_pred C----CeEEECCHHHHHHHHHcCCccCceEEeC--ChHHHHHHHcCCCCchHHHHHh
Confidence 2 388888875 4457889899999999 9999999999999999999875
No 12
>2cun_A Phosphoglycerate kinase; structural genomics, tanpaku 3000, structural genomics/proteomics initiative, RSGI, NPPSFA; HET: 3PG; 2.10A {Pyrococcus horikoshii}
Probab=100.00 E-value=6.3e-61 Score=474.20 Aligned_cols=200 Identities=18% Similarity=0.257 Sum_probs=186.0
Q ss_pred CCCCCCcEEEEEcCCccchHHHHHHHHHHh--cCeEEEehHHHHHHHHhcCCCCCCc---cccc----CchHHHHHHHHH
Q 014711 2 AKLDEKPYAAIIGGGNLCNKAAALHFLASR--CDGLIFVGLMSFQIMHALGLPVPPE---LVEK----GANDAASDLIQF 72 (420)
Q Consensus 2 ~~~~~~p~~~i~GG~kv~dki~~~~~l~~~--~d~i~~gG~~a~~fl~a~g~~ig~s---~~e~----~~~~~a~~~~~~ 72 (420)
+++|+||+++|+|||||||||++|+||++| ||+|||||+||||||+|+|++||+| ++|+ +.++.|++|+++
T Consensus 185 l~~p~rP~vaIlGGaKVsdKi~vi~nLl~k~~vD~liiGGgma~tFl~A~G~~iG~S~~~l~E~~g~~d~~~~a~~ll~k 264 (410)
T 2cun_A 185 YYSKDSPKIYVLGGAKVEDSLKVVENVLRRERADLVLTGGLVANVFTLAKGFDLGRKNVEFMKKKGLLDYVKHAEEILDE 264 (410)
T ss_dssp HTCCCSCEEEEECSSCHHHHHHHHHHHHHTTSCSEEEECHHHHHHHHHHHTCCCCHHHHHHHHTTTGGGGHHHHHHHHHH
T ss_pred hcCCCCCeEEEEcCcchhhHHHHHHHHhcccCCCEEEEChHHHHHHHHHcCCCcCcchhhhhhcccchhhHHHHHHHHHh
Confidence 579999999999999999999999999999 9999999999999999999999999 9999 899999999998
Q ss_pred HhhCCCeeecceeEEEecCCCCCceeEecCCC-----CCCCCCcccCCcccHHHHHHHhcCCCeEEEeccceEEEcCCCC
Q 014711 73 ARDKHITILYPKDFWCTKIHHPNQVEIFPSHG-----IPDGWEPVDIGPRSVEEITSTITKCKKVIWVGPVKFRFSSQYS 147 (420)
Q Consensus 73 ~~~~~~~i~lP~D~~~~~~~~~~~~~~~~~~~-----i~~~~~~~DiGp~T~~~~~~~~~~~~~i~wnGp~G~~e~~~f~ 147 (420)
+ |++|+||+|++|+++ .+..+++.++ || |||++||||+|++.|++.+..|+||+|||||||||.++|+
T Consensus 265 a---g~~i~lPvD~vva~~---a~~~~~~~~~~~~~~ip-~~m~lDiGp~T~~~~~~~i~~akTIvWNGPmGvFE~~~Fa 337 (410)
T 2cun_A 265 F---YPYIRTPVDFAVDYK---GERVEIDLLSENRGLLH-QYQIMDIGKRTAEKYREILMKARIIVANGPMGVFEREEFA 337 (410)
T ss_dssp H---GGGEECCSEEEEEET---TEEEEEESSSGGGGGGG-TSCEEEECHHHHHHHHHHHHTCSEEEEESCSSCTTSGGGC
T ss_pred c---cCeEeCCceeEEecC---CCeEEEecccccccCCC-CCeeeeeCHHHHHHHHHHHhhCCEEEEECCcccccCchHH
Confidence 7 899999999999986 3445678888 99 9999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHhhhcCCCCeeEechhH---HHHHhhcCCCcceeeeecCCCeeeeeeccccCCCccccccC
Q 014711 148 NGASKLTGMLCKVSQGTCNVTVIGSMA---CKAIAKVSSSIFGLNMVESGSAVWEFLKGRMLPGVSALDRA 215 (420)
Q Consensus 148 ~GT~~l~~~~a~~~~~~~~~~i~gg~~---~~~~~~~~~~~~~~st~~GGGa~le~l~g~~lPgv~aL~~~ 215 (420)
.||++++++++++. .+||+||++ ++..+|+ ++++|+|| ||||+|+||+|+.+|++++|.+.
T Consensus 338 ~GT~~va~aia~~~----~~sivGGGDt~aav~~~g~-d~~shiST--GGGA~Le~LeGk~LPgv~aL~~~ 401 (410)
T 2cun_A 338 IGTVEVFKAIADSP----AFSVLGGGHSIASIQKYGI-TGITHIST--GGGAMLSFFAGEELPVLRALQIS 401 (410)
T ss_dssp HHHHHHHHHHHHSS----SEEEEECGGGGGGGGGSCC-CCCSEECS--CSHHHHHHHTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcC----CeEEECChHHHHHHHHhCC-CCcEEEcC--ChHHHHHHHcCCCCcHHHHHHHH
Confidence 99999999998852 388888875 4457889 89999999 99999999999999999999754
No 13
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=100.00 E-value=1.1e-32 Score=257.55 Aligned_cols=187 Identities=23% Similarity=0.353 Sum_probs=165.4
Q ss_pred ccccccccCCCCCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhc
Q 014711 219 DIDWSAAYHDPAQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVA 298 (420)
Q Consensus 219 ~~~~~~~f~~~~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~ 298 (420)
..+|.+.|++ ++++|||||||+|.++..+|+.+|+.+|+|+|+|+.+++.|++++.+.+++|++++++|+.++++..+
T Consensus 24 ~~d~~~~f~~-~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~- 101 (218)
T 3dxy_A 24 MLDFPALFGR-EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMI- 101 (218)
T ss_dssp CCCHHHHHSS-CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHS-
T ss_pred CCCHHHHcCC-CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHc-
Confidence 4678888886 68999999999999999999999999999999999999999999999999999999999999765555
Q ss_pred cCCCeEeEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHHHHHHHHHHHHcCCceeEeecccccc
Q 014711 299 SYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGKLVLVQDECDT 378 (420)
Q Consensus 299 ~~~~~~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~~~~~~~~l~~~g~~~~~~~~D~~~~ 378 (420)
+++++|.|+++||+||++.+|+++|++++.+++.+.++|||||.|++.||+..|++++.+.+.+.+-+. ++..
T Consensus 102 -~~~~~d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~~~~~~~~~~~~~~~~~~-~~~~----- 174 (218)
T 3dxy_A 102 -PDNSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEPYAEHMLEVMSSIDGYK-NLSE----- 174 (218)
T ss_dssp -CTTCEEEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHTSTTEE-ECCT-----
T ss_pred -CCCChheEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHhCCCcc-cccC-----
Confidence 588999999999999999999999999999999999999999999999999999999999998765332 2211
Q ss_pred ccCCCCCCCCCCCCCCCHHHHHHHHCCCCeEEEEEEeCC
Q 014711 379 KTNQGGWLGENSFGVRSDWEQHVIDRGAPMYRLMLSKPS 417 (420)
Q Consensus 379 ~~~~~~~~~~~~~~~~T~~E~~~~~~G~~i~~~~~~k~~ 417 (420)
..+|.......+.|+||+++.+.|+.+|++.|+|++
T Consensus 175 ---~~~~~~~~~~~~~t~fE~k~~~~G~~~~~~~~~~~~ 210 (218)
T 3dxy_A 175 ---SNDYVPRPASRPVTKFEQRGHRLGHGVWDLMFERVK 210 (218)
T ss_dssp ---TSSCBCCCTTSCCCTTCCTTCTTCCSCEEEEEEECC
T ss_pred ---cCccCCCCCCCCCcHHHHHHHHCCCCeEEEEEEEcc
Confidence 123444455688999999999999999999999986
No 14
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=100.00 E-value=4e-32 Score=252.34 Aligned_cols=186 Identities=18% Similarity=0.387 Sum_probs=166.2
Q ss_pred ccccccccCCCCCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhc
Q 014711 219 DIDWSAAYHDPAQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVA 298 (420)
Q Consensus 219 ~~~~~~~f~~~~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~ 298 (420)
..+|.+.|++ ++++|||||||+|.+++.||+.+|+.+|+|+|+|+.+++.|++++.+.+++|++++++|+.++ +..+
T Consensus 28 ~~~~~~~f~~-~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l-~~~~- 104 (213)
T 2fca_A 28 KGKWNTVFGN-DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTL-TDVF- 104 (213)
T ss_dssp TTCHHHHHTS-CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGH-HHHC-
T ss_pred CCCHHHHcCC-CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHH-Hhhc-
Confidence 4578888875 579999999999999999999999999999999999999999999999999999999999985 4444
Q ss_pred cCCCeEeEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHHHHHHHHHHHHcCCceeEeecccccc
Q 014711 299 SYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGKLVLVQDECDT 378 (420)
Q Consensus 299 ~~~~~~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~~~~~~~~l~~~g~~~~~~~~D~~~~ 378 (420)
+++++|.|+++||+||++.+|+++|++++.+++++.++|||||.|++.||+..+.+++.+.+.++++.......|.+
T Consensus 105 -~~~~~d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~g~~~~~~~~d~~-- 181 (213)
T 2fca_A 105 -EPGEVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNRGLFEYSLKSFSEYGLLLTYVSLDLH-- 181 (213)
T ss_dssp -CTTSCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCHHHHHHHHHHHHHHTCEEEEEESSGG--
T ss_pred -CcCCcCEEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCcccccccccc--
Confidence 47789999999999999999999999999999999999999999999999999999999999999987766666633
Q ss_pred ccCCCCCCCCCCCCCCCHHHHHHHHCCCCeEEEEEEeCC
Q 014711 379 KTNQGGWLGENSFGVRSDWEQHVIDRGAPMYRLMLSKPS 417 (420)
Q Consensus 379 ~~~~~~~~~~~~~~~~T~~E~~~~~~G~~i~~~~~~k~~ 417 (420)
. ...+..++|+||+++.++|++||++.|+|..
T Consensus 182 ---~----~~~~~~~~t~~E~~~~~~G~~i~~~~~~~~~ 213 (213)
T 2fca_A 182 ---N----SNLEGNIMTEYEEKFSALGQPIYRAEVEWRT 213 (213)
T ss_dssp ---G----SSCTTCCCCTTGGGSSSSSCCCEEEEEECCC
T ss_pred ---c----ccCCCCCCcHHHHHHHHCCCCeEEEEEEECC
Confidence 1 1345678899999999999999999999863
No 15
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.97 E-value=3.9e-30 Score=242.88 Aligned_cols=180 Identities=23% Similarity=0.353 Sum_probs=144.2
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHH------hCCCcEEEEEcChhhhhhhhhccCCCe
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQL------SGITNGYFIATNATSTFRSIVASYPGK 303 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~------~~l~nv~~~~~Da~~~~~~~~~~~~~~ 303 (420)
++++|||||||+|.++..||+.+|+.+|+|+|+|+.+++.|++++.. .++.|++++++|+.+.++.++ ++++
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~--~~~~ 123 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFF--YKGQ 123 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHC--CTTC
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhC--CCcC
Confidence 46799999999999999999999999999999999999999988764 467899999999987545555 5789
Q ss_pred EeEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHHHHHHHHHHHHcCCceeEeeccccccccCCC
Q 014711 304 LILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGKLVLVQDECDTKTNQG 383 (420)
Q Consensus 304 ~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~~~~~~~~l~~~g~~~~~~~~D~~~~~~~~~ 383 (420)
+|.|+++|||||++.+|+++|++++.+++.+.++|||||.|++.||+..|.+++.+.+.+++.+. .+..+ .+..
T Consensus 124 ~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~~~~~~~~~~~l~~~~~f~-~~~~~-----~~~~ 197 (235)
T 3ckk_A 124 LTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDVLELHDWMCTHFEEHPLFE-RVPLE-----DLSE 197 (235)
T ss_dssp EEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHTSTTEE-EECGG-----GGTT
T ss_pred eeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHHHHHCCCcc-ccCch-----hccc
Confidence 99999999999999999999999999999999999999999999999999999999999998543 33333 1222
Q ss_pred CCCCCCCCCCCCHHHHHHHHCCCCeEEEEEEeCCC
Q 014711 384 GWLGENSFGVRSDWEQHVIDRGAPMYRLMLSKPSC 418 (420)
Q Consensus 384 ~~~~~~~~~~~T~~E~~~~~~G~~i~~~~~~k~~~ 418 (420)
.|. .+.....|+||+++.++|.++|++.|+|++.
T Consensus 198 ~~~-~~~~~~~t~~e~k~~~~G~~~~~~~f~r~~~ 231 (235)
T 3ckk_A 198 DPV-VGHLGTSTEEGKKVLRNGGKNFPAIFRRIQD 231 (235)
T ss_dssp CTT-GGGTTTSSHHHHHHHHTTCCCEEEEEEECCC
T ss_pred Ccc-ccCCCCCCHHHHHHHHCCCCeEEEEEEECCC
Confidence 331 2334577999999999999999999999864
No 16
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.97 E-value=8.6e-30 Score=235.93 Aligned_cols=184 Identities=18% Similarity=0.389 Sum_probs=163.9
Q ss_pred ccccccccCCCCCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhc
Q 014711 219 DIDWSAAYHDPAQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVA 298 (420)
Q Consensus 219 ~~~~~~~f~~~~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~ 298 (420)
..+|.+.|++ ++.+|||||||+|.++..+|+.+|+.+++|+|+|+.+++.|++++...+++|++++++|+.++ +..+
T Consensus 31 ~~~~~~~f~~-~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~-~~~~- 107 (214)
T 1yzh_A 31 KAKWRDLFGN-DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDL-TDYF- 107 (214)
T ss_dssp TTTHHHHHTS-CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCG-GGTS-
T ss_pred ccCHHHHcCC-CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHH-Hhhc-
Confidence 3467777875 578999999999999999999999999999999999999999999999999999999999885 3333
Q ss_pred cCCCeEeEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHHHHHHHHHHHHcCCceeEeecccccc
Q 014711 299 SYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGKLVLVQDECDT 378 (420)
Q Consensus 299 ~~~~~~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~~~~~~~~l~~~g~~~~~~~~D~~~~ 378 (420)
+++++|.|++++|+||++.+|+++|+..+.+++.+.++|+|||.|++.||+..+.+++.+.+.++||....+..|.+
T Consensus 108 -~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~d~~-- 184 (214)
T 1yzh_A 108 -EDGEIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNRGLFEYSLVSFSQYGMKLNGVWLDLH-- 184 (214)
T ss_dssp -CTTCCSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHHTCEEEEEESSGG--
T ss_pred -CCCCCCEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHCCCeeeecccccc--
Confidence 46789999999999999999999999999999999999999999999999999999999999999998877777743
Q ss_pred ccCCCCCCCCCCCCCCCHHHHHHHHCCCCeEEEEEEe
Q 014711 379 KTNQGGWLGENSFGVRSDWEQHVIDRGAPMYRLMLSK 415 (420)
Q Consensus 379 ~~~~~~~~~~~~~~~~T~~E~~~~~~G~~i~~~~~~k 415 (420)
. ...+..+.|+||+++.++|++||++.+++
T Consensus 185 ---~----~~~~~~~~t~~e~~~~~~g~~i~~~~~~~ 214 (214)
T 1yzh_A 185 ---A----SDFEGNVMTEYEQKFSNKGQVIYRVEAEF 214 (214)
T ss_dssp ---G----SCCCCCCCCHHHHHTGGGCCCCEEEEEEC
T ss_pred ---c----cCCCCCCCcHHHHHHHHCCCCeEEEEEEC
Confidence 1 13456789999999999999999999874
No 17
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.95 E-value=6e-28 Score=228.68 Aligned_cols=190 Identities=17% Similarity=0.269 Sum_probs=153.6
Q ss_pred cccccccCC---------CCCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHh--------CCCcE
Q 014711 220 IDWSAAYHD---------PAQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLS--------GITNG 282 (420)
Q Consensus 220 ~~~~~~f~~---------~~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~--------~l~nv 282 (420)
.+|.+.|++ .++.+|||||||+|.+++.+|+.+|+.+|+|+|+|+.+++.|++++... ++.|+
T Consensus 30 ~~w~~~f~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv 109 (246)
T 2vdv_E 30 MDWSKLYPYYKNAENGQMTKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNI 109 (246)
T ss_dssp CCGGGTCGGGBC----CBSCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTE
T ss_pred CCHHHHhCcccccccccCCCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcE
Confidence 468777765 2468999999999999999999999999999999999999999998876 78899
Q ss_pred EEEEcChhhhhhhhhccCCCeEeEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHHHHHHHHHHH
Q 014711 283 YFIATNATSTFRSIVASYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFL 362 (420)
Q Consensus 283 ~~~~~Da~~~~~~~~~~~~~~~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~~~~~~~~l~ 362 (420)
+++++|+.+.++..+ .++++|.|+++|||||+|.+|.++|++++.+++.+.++|+|||.|++.||++.+.+++.+.+.
T Consensus 110 ~~~~~D~~~~l~~~~--~~~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~ 187 (246)
T 2vdv_E 110 NVLRGNAMKFLPNFF--EKGQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDVKDLHEWMVKHLE 187 (246)
T ss_dssp EEEECCTTSCGGGTS--CTTCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHH
T ss_pred EEEeccHHHHHHHhc--cccccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEeccHHHHHHHHHHHH
Confidence 999999988555545 478999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCceeEeeccccccccCCCCCCCCCCCCCCCHHHHHHHHCCCCeEEEEEEeCCC
Q 014711 363 EYGKGKLVLVQDECDTKTNQGGWLGENSFGVRSDWEQHVIDRGAPMYRLMLSKPSC 418 (420)
Q Consensus 363 ~~g~~~~~~~~D~~~~~~~~~~~~~~~~~~~~T~~E~~~~~~G~~i~~~~~~k~~~ 418 (420)
+++++ ..+..+. +..+| ......+.|+||+++.++|.++|.+.|+|+++
T Consensus 188 ~~~~~-~~~~~~~-----~~~d~-~~~~~~~~t~~e~k~~~~g~~~~~~~~~k~~~ 236 (246)
T 2vdv_E 188 EHPLF-ERLSKEW-----EENDE-CVKIMRNATEEGKKVERKKGDKFVACFTRLPT 236 (246)
T ss_dssp HSTTE-EECCHHH-----HHTCH-HHHHHHHSSHHHHHHHHTTCCCEEEEEEECCC
T ss_pred hCcCe-EecCccc-----cccCc-ccccCCCCCHHHHHHHHCCCCeEEEEEEECCC
Confidence 98863 3332221 11111 00112356999999999999999999999874
No 18
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.67 E-value=1.2e-16 Score=149.36 Aligned_cols=115 Identities=17% Similarity=0.199 Sum_probs=92.6
Q ss_pred cccCCCCCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCC-hHHHHHH---HHHhHHhCCCcEEEEEcChhhhhhhhhcc
Q 014711 224 AAYHDPAQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVN-GKLVTHC---RDSLQLSGITNGYFIATNATSTFRSIVAS 299 (420)
Q Consensus 224 ~~f~~~~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis-~~~i~~A---~~~~~~~~l~nv~~~~~Da~~~~~~~~~~ 299 (420)
+.+.. .+.+|||||||+|.++..||++.|+.+|+|+|+| +.|++.| ++++.+.+++|+.|+++|+.++ +..+
T Consensus 19 ~~~~~-~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l-~~~~-- 94 (225)
T 3p2e_A 19 EIIGQ-FDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESL-PFEL-- 94 (225)
T ss_dssp HHHTT-CSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBC-CGGG--
T ss_pred HHhCC-CCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHh-hhhc--
Confidence 33443 4689999999999999999999999999999999 6666666 8888888999999999999887 3322
Q ss_pred CCCeEeEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEE
Q 014711 300 YPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFL 346 (420)
Q Consensus 300 ~~~~~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~ 346 (420)
...+|.++++||.|. . +...+...++++++++++|||||+|++
T Consensus 95 -~d~v~~i~~~~~~~~--~-~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 95 -KNIADSISILFPWGT--L-LEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp -TTCEEEEEEESCCHH--H-HHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred -cCeEEEEEEeCCCcH--H-hhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 367999999987553 2 223333446899999999999999999
No 19
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.66 E-value=1.3e-15 Score=146.21 Aligned_cols=159 Identities=13% Similarity=0.038 Sum_probs=125.6
Q ss_pred CCCEEEEEcCCccHHHHHHHHh-CCCCeEEEEeCChHHHHHHHHHhHHh-CCCcEEEEEcChhhhhhhhhccCCCeEeEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARK-RKDLNFLGLEVNGKLVTHCRDSLQLS-GITNGYFIATNATSTFRSIVASYPGKLILV 307 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~-~P~~~viGiDis~~~i~~A~~~~~~~-~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i 307 (420)
++.+|||+|||+|.++..+++. .|..+++|+|+++.+++.|++++... +..|+.++++|+.+. + ++++||.|
T Consensus 110 ~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~----~--~~~~fD~V 183 (275)
T 1yb2_A 110 PGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADF----I--SDQMYDAV 183 (275)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTC----C--CSCCEEEE
T ss_pred CcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhcc----C--cCCCccEE
Confidence 4679999999999999999998 78999999999999999999999888 888999999999763 2 35789999
Q ss_pred EEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHHHHHHHHHHHHcCCceeEeeccccccccCCCCCCC
Q 014711 308 SIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGKLVLVQDECDTKTNQGGWLG 387 (420)
Q Consensus 308 ~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~~~~~~~~l~~~g~~~~~~~~D~~~~~~~~~~~~~ 387 (420)
+++.|+|+ .+++.+.+.|||||++++.+......+.+.+.+.+.||....+.+.. ...|..
T Consensus 184 i~~~~~~~-------------~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~------~~~~~~ 244 (275)
T 1yb2_A 184 IADIPDPW-------------NHVQKIASMMKPGSVATFYLPNFDQSEKTVLSLSASGMHHLETVELM------KRRILV 244 (275)
T ss_dssp EECCSCGG-------------GSHHHHHHTEEEEEEEEEEESSHHHHHHHHHHSGGGTEEEEEEEEEE------ECCCCC
T ss_pred EEcCcCHH-------------HHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCeEEEEEEEe------cceeEe
Confidence 99877775 78999999999999999998877677778888888888765543321 112321
Q ss_pred CCCCCCCCHHHHHHHHCCCCeEEEEEEeCCC
Q 014711 388 ENSFGVRSDWEQHVIDRGAPMYRLMLSKPSC 418 (420)
Q Consensus 388 ~~~~~~~T~~E~~~~~~G~~i~~~~~~k~~~ 418 (420)
.....+.... ..|++.|-+.++|...
T Consensus 245 -~~~~~rp~~~----~~~~~~~li~ark~~~ 270 (275)
T 1yb2_A 245 -REGATRPASD----DLTHTAFITFAIKKSG 270 (275)
T ss_dssp -CTTCCCCGGG----GSCEEEEEEEEEECCS
T ss_pred -cCCccccccc----cCCCcEEEEEEEehhc
Confidence 1222222222 4688889888888764
No 20
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.64 E-value=2.2e-15 Score=144.54 Aligned_cols=158 Identities=11% Similarity=0.097 Sum_probs=125.4
Q ss_pred CCCEEEEEcCCccHHHHHHHHh-CCCCeEEEEeCChHHHHHHHHHhHHhCC-CcEEEEEcChhhhhhhhhccCCCeEeEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARK-RKDLNFLGLEVNGKLVTHCRDSLQLSGI-TNGYFIATNATSTFRSIVASYPGKLILV 307 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~-~P~~~viGiDis~~~i~~A~~~~~~~~l-~nv~~~~~Da~~~~~~~~~~~~~~~d~i 307 (420)
.+.+|||+|||+|.++..+++. .|..+++++|+|+.+++.|++++...++ .|+.++++|+.+. + ++++||.|
T Consensus 112 ~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~--~~~~~D~V 185 (277)
T 1o54_A 112 EGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG----F--DEKDVDAL 185 (277)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC----C--SCCSEEEE
T ss_pred CCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc----c--cCCccCEE
Confidence 4679999999999999999999 7889999999999999999999988887 6899999999775 2 35689999
Q ss_pred EEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHHHHHHHHHHHHcCCceeEeeccccccccCCCCCCC
Q 014711 308 SIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGKLVLVQDECDTKTNQGGWLG 387 (420)
Q Consensus 308 ~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~~~~~~~~l~~~g~~~~~~~~D~~~~~~~~~~~~~ 387 (420)
+++.|+|| .+++.+.+.|+|||.+++.+........+.+.+++.||....+.++.. ..|.
T Consensus 186 ~~~~~~~~-------------~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~gf~~~~~~~~~~------~~~~- 245 (277)
T 1o54_A 186 FLDVPDPW-------------NYIDKCWEALKGGGRFATVCPTTNQVQETLKKLQELPFIRIEVWESLF------RPYK- 245 (277)
T ss_dssp EECCSCGG-------------GTHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHSSEEEEEEECCCC------CCEE-
T ss_pred EECCcCHH-------------HHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCceeEEEEEee------eeeE-
Confidence 99888776 789999999999999999988777778888889999987666655421 1121
Q ss_pred CCCCCCCCHHHHHHHHCCCCeEEEEEEeCC
Q 014711 388 ENSFGVRSDWEQHVIDRGAPMYRLMLSKPS 417 (420)
Q Consensus 388 ~~~~~~~T~~E~~~~~~G~~i~~~~~~k~~ 417 (420)
..+...+..+ ...|++.|.+.++|..
T Consensus 246 ~~~~~~rp~~----~~~~~~~~li~ark~~ 271 (277)
T 1o54_A 246 PVPERLRPVD----RMVAHTAYMIFATKVC 271 (277)
T ss_dssp CCTTSCEECS----CCCCCSCEEEEEEECS
T ss_pred eccceeCCCc----cccCCCeEEEEEEecC
Confidence 1111111111 1468889988888875
No 21
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.64 E-value=6.6e-15 Score=134.36 Aligned_cols=121 Identities=17% Similarity=0.164 Sum_probs=105.2
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
++.+|||+|||+|.++..+++..|..+++|+|+|+.+++.|++++...++.|++++++|+.+.+. ...++|.|++
T Consensus 40 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-----~~~~~D~i~~ 114 (204)
T 3e05_A 40 DDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLD-----DLPDPDRVFI 114 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCT-----TSCCCSEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhh-----cCCCCCEEEE
Confidence 46899999999999999999999999999999999999999999999999899999999976532 2367999988
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHHHHHHHHHHHHcCC
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGK 366 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~~~~~~~~l~~~g~ 366 (420)
..+.+ ....+++++.+.|||||++++.+......+.+.+.++++||
T Consensus 115 ~~~~~-----------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~g~ 160 (204)
T 3e05_A 115 GGSGG-----------MLEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLEDHGY 160 (204)
T ss_dssp SCCTT-----------CHHHHHHHHHHHCCTTCEEEEEECBHHHHHHHHHHHHHTTC
T ss_pred CCCCc-----------CHHHHHHHHHHhcCCCeEEEEEecccccHHHHHHHHHHCCC
Confidence 74432 11489999999999999999987777777888999999998
No 22
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.64 E-value=2.5e-15 Score=141.82 Aligned_cols=123 Identities=15% Similarity=0.237 Sum_probs=109.5
Q ss_pred CCCEEEEEcCCccHHHHHHHHh-CCCCeEEEEeCChHHHHHHHHHhHHhCCCc-EEEEEcChhhhhhhhhccCCCeEeEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARK-RKDLNFLGLEVNGKLVTHCRDSLQLSGITN-GYFIATNATSTFRSIVASYPGKLILV 307 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~-~P~~~viGiDis~~~i~~A~~~~~~~~l~n-v~~~~~Da~~~~~~~~~~~~~~~d~i 307 (420)
++.+|||+|||+|.++..+++. .|..+++|+|+|+.+++.|++++...++.| +.++++|+.+. + ++.++|.|
T Consensus 93 ~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~--~~~~~D~v 166 (255)
T 3mb5_A 93 PGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG----I--EEENVDHV 166 (255)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC----C--CCCSEEEE
T ss_pred CCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc----c--CCCCcCEE
Confidence 4679999999999999999999 889999999999999999999999999887 99999999864 2 46789999
Q ss_pred EEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHHHHHHHHHHHHcC--CceeEe
Q 014711 308 SIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYG--KGKLVL 371 (420)
Q Consensus 308 ~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~~~~~~~~l~~~g--~~~~~~ 371 (420)
+++.|+|| .+++.+.+.|+|||.+++.+........+.+.+++++ |....+
T Consensus 167 ~~~~~~~~-------------~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~g~~f~~~~~ 219 (255)
T 3mb5_A 167 ILDLPQPE-------------RVVEHAAKALKPGGFFVAYTPCSNQVMRLHEKLREFKDYFMKPRT 219 (255)
T ss_dssp EECSSCGG-------------GGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHTGGGBSCCEE
T ss_pred EECCCCHH-------------HHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCccccEE
Confidence 99888776 7899999999999999998877777888899999998 766544
No 23
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.63 E-value=3.9e-16 Score=149.21 Aligned_cols=128 Identities=14% Similarity=0.206 Sum_probs=97.5
Q ss_pred cccCCCccccccCCccccccccccCCCCCCEEEEEcCCccHHHHHHHHhC--CCCeEEEEeCChHHHHHHHHHhHHhCCC
Q 014711 203 GRMLPGVSALDRAFPFDIDWSAAYHDPAQPLVVDIGSGNGLFLLGMARKR--KDLNFLGLEVNGKLVTHCRDSLQLSGIT 280 (420)
Q Consensus 203 g~~lPgv~aL~~~~p~~~~~~~~f~~~~~~~vLDIGcG~G~~~~~lA~~~--P~~~viGiDis~~~i~~A~~~~~~~~l~ 280 (420)
.++.|+++.+.+.. ..+.+.+.. ++.+|||||||+|.++..|++++ |+++|+|+|+|+.|++.|++++...+..
T Consensus 47 ~rsvP~Y~~~~~~i---~~l~~~~~~-~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~ 122 (261)
T 4gek_A 47 QRSVPGYSNIISMI---GMLAERFVQ-PGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAP 122 (261)
T ss_dssp HHHSTTHHHHHHHH---HHHHHHHCC-TTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCS
T ss_pred hhcCCCHHHHHHHH---HHHHHHhCC-CCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccC
Confidence 46677775443322 234444444 47899999999999999999984 6789999999999999999999887764
Q ss_pred -cEEEEEcChhhhhhhhhccCCCeEeEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 281 -NGYFIATNATSTFRSIVASYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 281 -nv~~~~~Da~~~~~~~~~~~~~~~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
|++|+++|+.++ +.+.+|.|++++.-.+... . -...+|++++++|||||.|++.
T Consensus 123 ~~v~~~~~D~~~~-------~~~~~d~v~~~~~l~~~~~---~---~~~~~l~~i~~~LkpGG~lii~ 177 (261)
T 4gek_A 123 TPVDVIEGDIRDI-------AIENASMVVLNFTLQFLEP---S---ERQALLDKIYQGLNPGGALVLS 177 (261)
T ss_dssp SCEEEEESCTTTC-------CCCSEEEEEEESCGGGSCH---H---HHHHHHHHHHHHEEEEEEEEEE
T ss_pred ceEEEeecccccc-------cccccccceeeeeeeecCc---h---hHhHHHHHHHHHcCCCcEEEEE
Confidence 799999999876 2456999988764333211 1 1137899999999999999885
No 24
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.62 E-value=8.2e-15 Score=130.00 Aligned_cols=124 Identities=14% Similarity=0.117 Sum_probs=104.1
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCC-cEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGIT-NGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~-nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
.+.+|||+|||+|.++..+++.+|..+++|+|+|+.+++.|++++...++. |+ ++++|+.+.++ ..+++||.|+
T Consensus 25 ~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~----~~~~~~D~i~ 99 (178)
T 3hm2_A 25 PHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFD----DVPDNPDVIF 99 (178)
T ss_dssp TTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGG----GCCSCCSEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhh----ccCCCCCEEE
Confidence 467899999999999999999999999999999999999999999988887 89 89999865432 1237899999
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHHHHHHHHHHHHcCCceeE
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGKLV 370 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~~~~~~~~l~~~g~~~~~ 370 (420)
+.++..+ ..+++.+.+.|||||++++.+..........+.++++++....
T Consensus 100 ~~~~~~~------------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (178)
T 3hm2_A 100 IGGGLTA------------PGVFAAAWKRLPVGGRLVANAVTVESEQMLWALRKQFGGTISS 149 (178)
T ss_dssp ECC-TTC------------TTHHHHHHHTCCTTCEEEEEECSHHHHHHHHHHHHHHCCEEEE
T ss_pred ECCcccH------------HHHHHHHHHhcCCCCEEEEEeeccccHHHHHHHHHHcCCeeEE
Confidence 8765443 2689999999999999999887777777788889988865543
No 25
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.61 E-value=8.8e-15 Score=140.30 Aligned_cols=138 Identities=18% Similarity=0.234 Sum_probs=108.6
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
++.+|||+|||+|.++..+++.+|..+++|+|+|+.+++.|++++...+++|++++++|+.+.+ ++++||.|++
T Consensus 109 ~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~------~~~~fD~Iv~ 182 (276)
T 2b3t_A 109 QPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSAL------AGQQFAMIVS 182 (276)
T ss_dssp SCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGG------TTCCEEEEEE
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhc------ccCCccEEEE
Confidence 4678999999999999999999999999999999999999999999999889999999997652 3568999999
Q ss_pred eCCCCCCCCcc---------hhhh--------hhHHHHHHHHHhhccCCeEEEEEeCcHHHHHHHHHHHHHcCCceeEee
Q 014711 310 QCPNPDFNRPE---------HRWR--------MVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGKLVLV 372 (420)
Q Consensus 310 ~fpdp~~k~~~---------~k~R--------l~~~~~l~~i~~~LkpgG~l~~~td~~~~~~~~~~~l~~~g~~~~~~~ 372 (420)
+.|-.+....| +... .....+++.+.+.|+|||++++.+... ..+.+.+.++++||..+.+.
T Consensus 183 npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~-~~~~~~~~l~~~Gf~~v~~~ 261 (276)
T 2b3t_A 183 NPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQ-QGEAVRQAFILAGYHDVETC 261 (276)
T ss_dssp CCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCSS-CHHHHHHHHHHTTCTTCCEE
T ss_pred CCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECch-HHHHHHHHHHHCCCcEEEEE
Confidence 74332211111 0001 123578999999999999999987543 35668888999998766555
Q ss_pred cc
Q 014711 373 QD 374 (420)
Q Consensus 373 ~D 374 (420)
.|
T Consensus 262 ~d 263 (276)
T 2b3t_A 262 RD 263 (276)
T ss_dssp EC
T ss_pred ec
Confidence 55
No 26
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.60 E-value=1.2e-14 Score=136.40 Aligned_cols=127 Identities=16% Similarity=0.095 Sum_probs=101.6
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
.+.+|||||||+|.+++.+|+..|+.+|+|+|+|+.+++.|++++...+++|++++++|+.++... +..+++||.|++
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~--~~~~~~fD~V~~ 147 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQR--KDVRESYDIVTA 147 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTC--TTTTTCEEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhccc--ccccCCccEEEE
Confidence 367899999999999999999889999999999999999999999999998999999999876210 001578999998
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeC--cHHHHHHHHHHHHHcCCceeE
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSD--IEEVMLRMKQQFLEYGKGKLV 370 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td--~~~~~~~~~~~l~~~g~~~~~ 370 (420)
..... ...+++.+.++|||||.|++... ...-...+.+.++++|+....
T Consensus 148 ~~~~~------------~~~~l~~~~~~LkpgG~l~~~~g~~~~~~~~~~~~~l~~~g~~~~~ 198 (240)
T 1xdz_A 148 RAVAR------------LSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAITTLGGELEN 198 (240)
T ss_dssp ECCSC------------HHHHHHHHGGGEEEEEEEEEEECC-CHHHHHHHHHHHHHTTEEEEE
T ss_pred eccCC------------HHHHHHHHHHhcCCCCEEEEEeCCCchHHHHHHHHHHHHcCCeEeE
Confidence 74211 14899999999999999998643 233344566778888876543
No 27
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.60 E-value=2.1e-14 Score=131.81 Aligned_cols=122 Identities=15% Similarity=0.119 Sum_probs=103.4
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCC-cEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGIT-NGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~-nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
.+.+|||+|||+|.++..+|+. ..+++|+|+|+.+++.|++++...+++ |++++++|+.+.++ ....+|.|+
T Consensus 55 ~~~~vLDlGcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~-----~~~~~D~v~ 127 (204)
T 3njr_A 55 RGELLWDIGGGSGSVSVEWCLA--GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALA-----DLPLPEAVF 127 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGT-----TSCCCSEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcc-----cCCCCCEEE
Confidence 4679999999999999999998 789999999999999999999999998 99999999988532 234799998
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHHHHHHHHHHHHcCCceeEe
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGKLVL 371 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~~~~~~~~l~~~g~~~~~~ 371 (420)
+.... .. ++++++.+.|||||++++.+........+.+.+++.++....+
T Consensus 128 ~~~~~------------~~-~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~g~~i~~i 177 (204)
T 3njr_A 128 IGGGG------------SQ-ALYDRLWEWLAPGTRIVANAVTLESETLLTQLHARHGGQLLRI 177 (204)
T ss_dssp ECSCC------------CH-HHHHHHHHHSCTTCEEEEEECSHHHHHHHHHHHHHHCSEEEEE
T ss_pred ECCcc------------cH-HHHHHHHHhcCCCcEEEEEecCcccHHHHHHHHHhCCCcEEEE
Confidence 76311 11 3899999999999999999887788888999999998765443
No 28
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.60 E-value=1e-14 Score=138.25 Aligned_cols=127 Identities=17% Similarity=0.174 Sum_probs=103.1
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
.+.+|||||||+|..++.+|..+|+.+|+|+|+|+.+++.|++++.+.+++|++++++|+.++.... ..+++||.|++
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~--~~~~~fD~I~s 157 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREA--GHREAYARAVA 157 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTST--TTTTCEEEEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhccc--ccCCCceEEEE
Confidence 4678999999999999999999999999999999999999999999999999999999998873110 02478999998
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeC--cHHHHHHHHHHHHHcCCceeE
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSD--IEEVMLRMKQQFLEYGKGKLV 370 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td--~~~~~~~~~~~l~~~g~~~~~ 370 (420)
....++ +.+++.+.++|||||+|++... .......+.+.++.+|+....
T Consensus 158 ~a~~~~------------~~ll~~~~~~LkpgG~l~~~~g~~~~~e~~~~~~~l~~~G~~~~~ 208 (249)
T 3g89_A 158 RAVAPL------------CVLSELLLPFLEVGGAAVAMKGPRVEEELAPLPPALERLGGRLGE 208 (249)
T ss_dssp ESSCCH------------HHHHHHHGGGEEEEEEEEEEECSCCHHHHTTHHHHHHHHTEEEEE
T ss_pred CCcCCH------------HHHHHHHHHHcCCCeEEEEEeCCCcHHHHHHHHHHHHHcCCeEEE
Confidence 632221 4799999999999999988653 234445567777888877544
No 29
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.59 E-value=1.2e-14 Score=136.92 Aligned_cols=159 Identities=12% Similarity=0.035 Sum_probs=122.9
Q ss_pred CCCEEEEEcCCccHHHHHHHHh-CCCCeEEEEeCChHHHHHHHHHhHHh-CCCcEEEEEcChhhhhhhhhccCCCeEeEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARK-RKDLNFLGLEVNGKLVTHCRDSLQLS-GITNGYFIATNATSTFRSIVASYPGKLILV 307 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~-~P~~~viGiDis~~~i~~A~~~~~~~-~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i 307 (420)
.+.+|||+|||+|.++..+++. .|..+++++|+|+.+++.|++++... +..|+.+.++|+.+. + + +++++|.|
T Consensus 96 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~-~--~--~~~~~D~v 170 (258)
T 2pwy_A 96 PGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEA-E--L--EEAAYDGV 170 (258)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGC-C--C--CTTCEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhc-C--C--CCCCcCEE
Confidence 4679999999999999999998 78899999999999999999999887 877999999999775 1 2 46789999
Q ss_pred EEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHHHHHHHHHHHHcCCceeEeeccccccccCCCCCCC
Q 014711 308 SIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGKLVLVQDECDTKTNQGGWLG 387 (420)
Q Consensus 308 ~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~~~~~~~~l~~~g~~~~~~~~D~~~~~~~~~~~~~ 387 (420)
+++.|+|| .+++.+.++|+|||++++.+........+.+.+++.||....+.+... ..|..
T Consensus 171 ~~~~~~~~-------------~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~gf~~~~~~~~~~------~~~~~ 231 (258)
T 2pwy_A 171 ALDLMEPW-------------KVLEKAALALKPDRFLVAYLPNITQVLELVRAAEAHPFRLERVLEVGW------REWEV 231 (258)
T ss_dssp EEESSCGG-------------GGHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHTTTTEEEEEEEEEEE------EEEEE
T ss_pred EECCcCHH-------------HHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCceEEEEEeee------eEeee
Confidence 99888776 789999999999999999988777777888888888887654432100 01210
Q ss_pred CCCCCCCCHHHHHHHHCCCCeEEEEEEeCC
Q 014711 388 ENSFGVRSDWEQHVIDRGAPMYRLMLSKPS 417 (420)
Q Consensus 388 ~~~~~~~T~~E~~~~~~G~~i~~~~~~k~~ 417 (420)
.+...+.. ....|++.|-+.++|..
T Consensus 232 -~~~~~rp~----~~~~~~~~~l~~ark~~ 256 (258)
T 2pwy_A 232 -RLPVAHPR----FQQVGHTAFLVALRRWK 256 (258)
T ss_dssp -ETTEEEEC----SSCCCCCCEEEEEEECC
T ss_pred -ccCccCCC----CccCCcceEEEEEEecC
Confidence 00010001 01367888988888875
No 30
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.58 E-value=6.6e-15 Score=138.25 Aligned_cols=133 Identities=12% Similarity=-0.016 Sum_probs=101.1
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
.+.+|||||||+|.++..+++..|. +++|||+|+.+++.|++++...+ .+++++++|+.+.... + ++++||.|++
T Consensus 60 ~G~rVLdiG~G~G~~~~~~~~~~~~-~v~~id~~~~~~~~a~~~~~~~~-~~~~~~~~~a~~~~~~-~--~~~~FD~i~~ 134 (236)
T 3orh_A 60 KGGRVLEVGFGMAIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQT-HKVIPLKGLWEDVAPT-L--PDGHFDGILY 134 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHTTSCEE-EEEEEECCHHHHHHHHHHGGGCS-SEEEEEESCHHHHGGG-S--CTTCEEEEEE
T ss_pred CCCeEEEECCCccHHHHHHHHhCCc-EEEEEeCCHHHHHHHHHHHhhCC-CceEEEeehHHhhccc-c--cccCCceEEE
Confidence 4789999999999999999988774 79999999999999999987665 4799999999887432 2 5789999965
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEe------------C--cHHHHHHHHHHHHHcCCceeE
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS------------D--IEEVMLRMKQQFLEYGKGKLV 370 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~t------------d--~~~~~~~~~~~l~~~g~~~~~ 370 (420)
|++....+..+......++++++|+|||||+|.+.. + ...+.+.....|.+.||....
T Consensus 135 ---D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~eaGF~~~~ 206 (236)
T 3orh_A 135 ---DTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKSKYSDITIMFEETQVPALLEAGFRREN 206 (236)
T ss_dssp ---CCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHHHHHHHTTTTCSCHHHHHHHHTHHHHHHHTCCGGG
T ss_pred ---eeeecccchhhhcchhhhhhhhhheeCCCCEEEEEecCCchhhhhhhhhhhhhhhHHHHHHHHHHcCCeEEE
Confidence 566544444444444689999999999999998742 1 012334455567788886543
No 31
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.57 E-value=5.4e-14 Score=126.01 Aligned_cols=113 Identities=16% Similarity=0.136 Sum_probs=86.2
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
++.+|||+|||+|.++..+|+. ..+|+|+|+|+.+++.|++++...+++|+++++.|+..+ ..+ .+++||.|++
T Consensus 22 ~~~~vLDiGcG~G~~~~~la~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l-~~~---~~~~fD~v~~ 95 (185)
T 3mti_A 22 DESIVVDATMGNGNDTAFLAGL--SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENL-DHY---VREPIRAAIF 95 (185)
T ss_dssp TTCEEEESCCTTSHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGG-GGT---CCSCEEEEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHH-Hhh---ccCCcCEEEE
Confidence 4689999999999999999988 789999999999999999999999999999999888765 222 3678999987
Q ss_pred eCCC-CCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEe
Q 014711 310 QCPN-PDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 348 (420)
Q Consensus 310 ~fpd-p~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~t 348 (420)
+++- |...............+++++.+.|||||++++..
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 135 (185)
T 3mti_A 96 NLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMI 135 (185)
T ss_dssp EEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEE
Confidence 6321 11000000001122478899999999999999865
No 32
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.57 E-value=1.3e-14 Score=133.60 Aligned_cols=132 Identities=11% Similarity=0.123 Sum_probs=96.4
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHH----HhHHhCCCcEEEEEcChhhhhhhhhccCCCeEe
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRD----SLQLSGITNGYFIATNATSTFRSIVASYPGKLI 305 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~----~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d 305 (420)
++.+|||||||+|.++..+++.+|+.+|+|+|+|+.|++.+.+ +....+++|+.|+++|+.++ +..+++ |
T Consensus 27 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l-----~~~~~~-d 100 (218)
T 3mq2_A 27 YDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERL-----PPLSGV-G 100 (218)
T ss_dssp SSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTC-----CSCCCE-E
T ss_pred CCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhC-----CCCCCC-C
Confidence 4678999999999999999999999999999999998886433 33446778999999999885 224566 8
Q ss_pred EEEEeCCCCCCCCc-chhhhhhHHHHHHHHHhhccCCeEEEEEeC-----------------cHHHH-HHHHHHHHHcCC
Q 014711 306 LVSIQCPNPDFNRP-EHRWRMVQRSLVEAVSDLLVHDGKVFLQSD-----------------IEEVM-LRMKQQFLEYGK 366 (420)
Q Consensus 306 ~i~~~fpdp~~k~~-~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td-----------------~~~~~-~~~~~~l~~~g~ 366 (420)
.+++.++ |.... |+.. -...+++++.++|||||.|++... ...+. +.+.+.+.+.||
T Consensus 101 ~v~~~~~--~~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf 176 (218)
T 3mq2_A 101 ELHVLMP--WGSLLRGVLG--SSPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGW 176 (218)
T ss_dssp EEEEESC--CHHHHHHHHT--SSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTE
T ss_pred EEEEEcc--chhhhhhhhc--cHHHHHHHHHHHcCCCcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCC
Confidence 8877654 21110 0000 014899999999999999999642 12222 336678888998
Q ss_pred ceeEe
Q 014711 367 GKLVL 371 (420)
Q Consensus 367 ~~~~~ 371 (420)
....+
T Consensus 177 ~i~~~ 181 (218)
T 3mq2_A 177 KLADC 181 (218)
T ss_dssp EEEEE
T ss_pred Cceee
Confidence 76543
No 33
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.56 E-value=4.6e-14 Score=134.92 Aligned_cols=124 Identities=17% Similarity=0.212 Sum_probs=106.6
Q ss_pred CCCEEEEEcCCccHHHHHHHHh-CCCCeEEEEeCChHHHHHHHHHhHHh-C--CCcEEEEEcChhhhhhhhhccCCCeEe
Q 014711 230 AQPLVVDIGSGNGLFLLGMARK-RKDLNFLGLEVNGKLVTHCRDSLQLS-G--ITNGYFIATNATSTFRSIVASYPGKLI 305 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~-~P~~~viGiDis~~~i~~A~~~~~~~-~--l~nv~~~~~Da~~~~~~~~~~~~~~~d 305 (420)
.+.+|||+|||+|.++..+++. .|..+++++|+|+.+++.|++++... + ..|+.++++|+.+.. + +++++|
T Consensus 99 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~---~--~~~~~D 173 (280)
T 1i9g_A 99 PGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSE---L--PDGSVD 173 (280)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCC---C--CTTCEE
T ss_pred CCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcC---C--CCCcee
Confidence 4679999999999999999996 57899999999999999999999887 6 678999999998751 2 467899
Q ss_pred EEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHHHHHHHHHHHH-cCCceeEe
Q 014711 306 LVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLE-YGKGKLVL 371 (420)
Q Consensus 306 ~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~~~~~~~~l~~-~g~~~~~~ 371 (420)
.|+++.|+|| .+++.+.++|+|||++++.+....+...+.+.+.+ .+|....+
T Consensus 174 ~v~~~~~~~~-------------~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~~~f~~~~~ 227 (280)
T 1i9g_A 174 RAVLDMLAPW-------------EVLDAVSRLLVAGGVLMVYVATVTQLSRIVEALRAKQCWTEPRA 227 (280)
T ss_dssp EEEEESSCGG-------------GGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHHSSBCCCEE
T ss_pred EEEECCcCHH-------------HHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhcCCcCCcEE
Confidence 9999988887 78999999999999999998887777778888877 66654443
No 34
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.55 E-value=1.7e-14 Score=131.67 Aligned_cols=123 Identities=17% Similarity=0.214 Sum_probs=102.9
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
.+.+|||+|||+|.++..+++ .+..+++|+|+|+.+++.|++++...++.|++++++|+.+. .+++||.|++
T Consensus 60 ~~~~vLDiG~G~G~~~~~l~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~-------~~~~fD~i~~ 131 (205)
T 3grz_A 60 KPLTVADVGTGSGILAIAAHK-LGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLAD-------VDGKFDLIVA 131 (205)
T ss_dssp SCCEEEEETCTTSHHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTT-------CCSCEEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHH-CCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEecccccc-------CCCCceEEEE
Confidence 468999999999999999887 46779999999999999999999999988899999999765 3678999998
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHHHHHHHHHHHHcCCceeEe
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGKLVL 371 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~~~~~~~~l~~~g~~~~~~ 371 (420)
+.+-. + ...+++++.+.|+|||++++.+-.....+.+.+.+++.|+.....
T Consensus 132 ~~~~~------~-----~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~Gf~~~~~ 182 (205)
T 3grz_A 132 NILAE------I-----LLDLIPQLDSHLNEDGQVIFSGIDYLQLPKIEQALAENSFQIDLK 182 (205)
T ss_dssp ESCHH------H-----HHHHGGGSGGGEEEEEEEEEEEEEGGGHHHHHHHHHHTTEEEEEE
T ss_pred CCcHH------H-----HHHHHHHHHHhcCCCCEEEEEecCcccHHHHHHHHHHcCCceEEe
Confidence 74321 1 147899999999999999997544555677888999999876554
No 35
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.55 E-value=6.3e-14 Score=126.87 Aligned_cols=115 Identities=15% Similarity=0.107 Sum_probs=90.3
Q ss_pred CCCEEEEEcCCccHHHHHHHHhC-CCCeEEEEeCChHHHHHHHHHhHHhCC-CcEEEEEcChhhhhhhhhccCCCeEeEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKR-KDLNFLGLEVNGKLVTHCRDSLQLSGI-TNGYFIATNATSTFRSIVASYPGKLILV 307 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~-P~~~viGiDis~~~i~~A~~~~~~~~l-~nv~~~~~Da~~~~~~~~~~~~~~~d~i 307 (420)
++.+|||+|||+|.++..+++.. |..+++|+|+|+.+++.|++++...++ .|++++++|+.++. .. .+++||.|
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~---~~~~fD~v 97 (197)
T 3eey_A 22 EGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMD-KY---IDCPVKAV 97 (197)
T ss_dssp TTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGG-GT---CCSCEEEE
T ss_pred CCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHh-hh---ccCCceEE
Confidence 46799999999999999999985 778999999999999999999999888 68999999998762 22 36789999
Q ss_pred EEeCCC-CCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEe
Q 014711 308 SIQCPN-PDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 348 (420)
Q Consensus 308 ~~~fpd-p~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~t 348 (420)
+++.|- |..............++++++.++|||||++++..
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 139 (197)
T 3eey_A 98 MFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVI 139 (197)
T ss_dssp EEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEE
Confidence 987533 21111111111122479999999999999999875
No 36
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.55 E-value=2.9e-14 Score=131.01 Aligned_cols=129 Identities=10% Similarity=0.118 Sum_probs=103.7
Q ss_pred CCCEEEEEcCCccHHHHHHHHhC-CCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKR-KDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~-P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
.+.+|||+|||+|.++..+++.. |..+++|+|+|+.+++.|++++...+++|+.++++|+.++ +..+++||.|+
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~-----~~~~~~fD~v~ 111 (219)
T 3dh0_A 37 EGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKI-----PLPDNTVDFIF 111 (219)
T ss_dssp TTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBC-----SSCSSCEEEEE
T ss_pred CCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccC-----CCCCCCeeEEE
Confidence 46799999999999999999996 8899999999999999999999999988999999999875 12578899999
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCc----------H--HHHHHHHHHHHHcCCceeEe
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI----------E--EVMLRMKQQFLEYGKGKLVL 371 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~----------~--~~~~~~~~~l~~~g~~~~~~ 371 (420)
+...-.+..+ ...+++++.++|||||.+++..-. . ...+++.+.+++.||.....
T Consensus 112 ~~~~l~~~~~--------~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 178 (219)
T 3dh0_A 112 MAFTFHELSE--------PLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRV 178 (219)
T ss_dssp EESCGGGCSS--------HHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEE
T ss_pred eehhhhhcCC--------HHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEE
Confidence 8743332211 137999999999999999986311 0 01356788899999876543
No 37
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.55 E-value=6.1e-14 Score=130.07 Aligned_cols=133 Identities=19% Similarity=0.252 Sum_probs=102.4
Q ss_pred CCCEEEEEcCC-ccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSG-NGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG-~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
++.+|||+||| +|.++..+++.. ..+++|+|+|+.+++.|++++...++ |++++++|+..+ .. + .+++||.|+
T Consensus 55 ~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~-~~-~--~~~~fD~I~ 128 (230)
T 3evz_A 55 GGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIERNNS-NVRLVKSNGGII-KG-V--VEGTFDVIF 128 (230)
T ss_dssp SSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHTTC-CCEEEECSSCSS-TT-T--CCSCEEEEE
T ss_pred CCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHhCC-CcEEEeCCchhh-hh-c--ccCceeEEE
Confidence 46899999999 999999999986 78999999999999999999999888 899999997544 11 2 358899999
Q ss_pred EeCCCCCCCCcch-----hh--------hhhHHHHHHHHHhhccCCeEEEEEeC-cHHHHHHHHHHHHHcCCceeE
Q 014711 309 IQCPNPDFNRPEH-----RW--------RMVQRSLVEAVSDLLVHDGKVFLQSD-IEEVMLRMKQQFLEYGKGKLV 370 (420)
Q Consensus 309 ~~fpdp~~k~~~~-----k~--------Rl~~~~~l~~i~~~LkpgG~l~~~td-~~~~~~~~~~~l~~~g~~~~~ 370 (420)
++ .|++..... .. ......+++.+.+.|||||++++.+. .....+.+.+.++++|+....
T Consensus 129 ~n--pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~l~~~g~~~~~ 202 (230)
T 3evz_A 129 SA--PPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKEKLLNVIKERGIKLGYSVKD 202 (230)
T ss_dssp EC--CCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCHHHHHHHHHHHHHTTCEEEE
T ss_pred EC--CCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccHhHHHHHHHHHHHcCCceEE
Confidence 87 333221110 00 01125899999999999999998754 345667788899999986543
No 38
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.55 E-value=4.4e-14 Score=129.02 Aligned_cols=103 Identities=13% Similarity=0.210 Sum_probs=87.4
Q ss_pred CEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCC-cEEEEEcChhhhhhhhhccCCCeEeEEEEe
Q 014711 232 PLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGIT-NGYFIATNATSTFRSIVASYPGKLILVSIQ 310 (420)
Q Consensus 232 ~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~-nv~~~~~Da~~~~~~~~~~~~~~~d~i~~~ 310 (420)
.+|||||||+|.++..+++. |..+++|+|+|+.+++.|++++...++. |++++++|+.++ +.++++||.|+++
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-----~~~~~~~D~v~~~ 118 (219)
T 3dlc_A 45 GTCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNI-----PIEDNYADLIVSR 118 (219)
T ss_dssp EEEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBC-----SSCTTCEEEEEEE
T ss_pred CEEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHC-----CCCcccccEEEEC
Confidence 39999999999999999998 8899999999999999999999988875 799999999875 2257899999987
Q ss_pred CCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEe
Q 014711 311 CPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 348 (420)
Q Consensus 311 fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~t 348 (420)
..-.+... ...+++++.++|||||.+++..
T Consensus 119 ~~l~~~~~--------~~~~l~~~~~~L~pgG~l~~~~ 148 (219)
T 3dlc_A 119 GSVFFWED--------VATAFREIYRILKSGGKTYIGG 148 (219)
T ss_dssp SCGGGCSC--------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred chHhhccC--------HHHHHHHHHHhCCCCCEEEEEe
Confidence 54333211 1379999999999999999863
No 39
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.54 E-value=4.9e-14 Score=134.32 Aligned_cols=106 Identities=15% Similarity=0.247 Sum_probs=91.1
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
++.+|||||||+|.++..+++.+|..+++|+|+|+.+++.|++++...+++|+.++++|+.++ +.++++||.|++
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~-----~~~~~~fD~v~~ 111 (276)
T 3mgg_A 37 PGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSL-----PFEDSSFDHIFV 111 (276)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGC-----CSCTTCEEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccC-----CCCCCCeeEEEE
Confidence 468999999999999999999999999999999999999999999999999999999999875 225789999998
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEe
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 348 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~t 348 (420)
...-.+..+. ..+++.+.++|||||++++..
T Consensus 112 ~~~l~~~~~~--------~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 112 CFVLEHLQSP--------EEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp ESCGGGCSCH--------HHHHHHHHHHEEEEEEEEEEE
T ss_pred echhhhcCCH--------HHHHHHHHHHcCCCcEEEEEE
Confidence 7533332111 379999999999999999864
No 40
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.54 E-value=5.6e-14 Score=130.55 Aligned_cols=165 Identities=11% Similarity=0.079 Sum_probs=111.6
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
++.+|||||||+|.++..+++.+|..+++|+|+|+.+++.|++++...+ |+.++++|+.++. .+++||.|++
T Consensus 44 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~d~~~~~------~~~~fD~v~~ 115 (234)
T 3dtn_A 44 ENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL--KVKYIEADYSKYD------FEEKYDMVVS 115 (234)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT--TEEEEESCTTTCC------CCSCEEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC--CEEEEeCchhccC------CCCCceEEEE
Confidence 4689999999999999999999999999999999999999999876554 8999999998762 2478999998
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeC----cHHHHH----HHHHHHHHcCCceeEeeccccccccC
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSD----IEEVML----RMKQQFLEYGKGKLVLVQDECDTKTN 381 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td----~~~~~~----~~~~~l~~~g~~~~~~~~D~~~~~~~ 381 (420)
...-.+... ....++++++.++|||||.+++.+- ...... .....+...++...... ..+ .
T Consensus 116 ~~~l~~~~~------~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~ 184 (234)
T 3dtn_A 116 ALSIHHLED------EDKKELYKRSYSILKESGIFINADLVHGETAFIENLNKTIWRQYVENSGLTEEEIA-AGY----E 184 (234)
T ss_dssp ESCGGGSCH------HHHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHHHTSSCCHHHHH-TTC-----
T ss_pred eCccccCCH------HHHHHHHHHHHHhcCCCcEEEEEEecCCCChhhhhHHHHHHHHHHHhcCCCHHHHH-HHH----H
Confidence 853332211 1113689999999999999998651 111111 11222233333221110 000 0
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHCCCCeEEEEEEeC
Q 014711 382 QGGWLGENSFGVRSDWEQHVIDRGAPMYRLMLSKP 416 (420)
Q Consensus 382 ~~~~~~~~~~~~~T~~E~~~~~~G~~i~~~~~~k~ 416 (420)
.. .........++.+.+.+.|+..-++.++..
T Consensus 185 ~~---~~~~~~~~~~~~~ll~~aGF~~v~~~~~~~ 216 (234)
T 3dtn_A 185 RS---KLDKDIEMNQQLNWLKEAGFRDVSCIYKYY 216 (234)
T ss_dssp ------CCCCCBHHHHHHHHHHTTCEEEEEEEEET
T ss_pred hc---ccccccCHHHHHHHHHHcCCCceeeeeeec
Confidence 00 011123345678889999999888877653
No 41
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.54 E-value=7.2e-14 Score=132.69 Aligned_cols=133 Identities=17% Similarity=0.276 Sum_probs=102.4
Q ss_pred CCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCC-cEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGIT-NGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~-nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
+.+|||+|||+|.+++.+|++.+. +++|+|+++.+++.|++++..+++. |++++++|+.++.. .+ ++++||.|++
T Consensus 50 ~~~vLDlG~G~G~~~~~la~~~~~-~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~-~~--~~~~fD~Ii~ 125 (259)
T 3lpm_A 50 KGKIIDLCSGNGIIPLLLSTRTKA-KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITD-LI--PKERADIVTC 125 (259)
T ss_dssp CCEEEETTCTTTHHHHHHHTTCCC-EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGG-TS--CTTCEEEEEE
T ss_pred CCEEEEcCCchhHHHHHHHHhcCC-cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhh-hh--ccCCccEEEE
Confidence 678999999999999999999765 9999999999999999999999987 59999999998732 22 3689999999
Q ss_pred eCCCCCCCC-c-------------chhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHHHHHHHHHHHHcCCceeE
Q 014711 310 QCPNPDFNR-P-------------EHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGKLV 370 (420)
Q Consensus 310 ~fpdp~~k~-~-------------~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~~~~~~~~l~~~g~~~~~ 370 (420)
+ .|++.. . ++..+.....+++.+.++|||||+|++...... ..++.+.+.++++....
T Consensus 126 n--pPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~-~~~~~~~l~~~~~~~~~ 197 (259)
T 3lpm_A 126 N--PPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPER-LLDIIDIMRKYRLEPKR 197 (259)
T ss_dssp C--CCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECTTT-HHHHHHHHHHTTEEEEE
T ss_pred C--CCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHHH-HHHHHHHHHHCCCceEE
Confidence 7 343222 0 000011225799999999999999999875544 45577888888876543
No 42
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.54 E-value=1.9e-13 Score=128.17 Aligned_cols=128 Identities=13% Similarity=0.083 Sum_probs=102.0
Q ss_pred CCCEEEEEcCCccHHHHHHHHh-CCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARK-RKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~-~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
++.+|||+|||+|.++..+|+. .|+.+|+|+|+|+.|++.+++++.+ ..|+..+.+|+.... .+ +....++|.|+
T Consensus 77 pG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~--~~ni~~V~~d~~~p~-~~-~~~~~~vDvVf 152 (233)
T 4df3_A 77 EGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRD--RRNIFPILGDARFPE-KY-RHLVEGVDGLY 152 (233)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTT--CTTEEEEESCTTCGG-GG-TTTCCCEEEEE
T ss_pred CCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHh--hcCeeEEEEeccCcc-cc-ccccceEEEEE
Confidence 5899999999999999999998 5999999999999999999998765 459999999998752 21 22467899998
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEe---------CcHHHHHHHHHHHHHcCCceeEe
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS---------DIEEVMLRMKQQFLEYGKGKLVL 371 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~t---------d~~~~~~~~~~~l~~~g~~~~~~ 371 (420)
..++.|+ ....++.++.+.|||||++++.. +.+..+....+.|++.||...+.
T Consensus 153 ~d~~~~~----------~~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p~~~~~~~ev~~L~~~GF~l~e~ 214 (233)
T 4df3_A 153 ADVAQPE----------QAAIVVRNARFFLRDGGYMLMAIKARSIDVTTEPSEVYKREIKTLMDGGLEIKDV 214 (233)
T ss_dssp ECCCCTT----------HHHHHHHHHHHHEEEEEEEEEEEECCHHHHHTCCCHHHHHHHHHHHHTTCCEEEE
T ss_pred EeccCCh----------hHHHHHHHHHHhccCCCEEEEEEecccCCCCCChHHHHHHHHHHHHHCCCEEEEE
Confidence 8766664 12368999999999999998852 22334556677888999987543
No 43
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.54 E-value=5.8e-14 Score=132.12 Aligned_cols=103 Identities=16% Similarity=0.193 Sum_probs=84.5
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
.+.+|||||||+|.++..+++..+. +++|+|+|+.+++.|++++. ..++.++++|+.++ +.++++||.|++
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~---~~~~~~~~~d~~~~-----~~~~~~fD~v~~ 114 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGAK-KVLGIDLSERMLTEAKRKTT---SPVVCYEQKAIEDI-----AIEPDAYNVVLS 114 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCS-EEEEEESCHHHHHHHHHHCC---CTTEEEEECCGGGC-----CCCTTCEEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHcCCC-EEEEEECCHHHHHHHHHhhc---cCCeEEEEcchhhC-----CCCCCCeEEEEE
Confidence 4689999999999999999998654 99999999999999998865 46899999999875 224789999998
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeC
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSD 349 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td 349 (420)
...-.+..+ ...+++++.++|||||.+++.+.
T Consensus 115 ~~~l~~~~~--------~~~~l~~~~~~LkpgG~l~~~~~ 146 (253)
T 3g5l_A 115 SLALHYIAS--------FDDICKKVYINLKSSGSFIFSVE 146 (253)
T ss_dssp ESCGGGCSC--------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred chhhhhhhh--------HHHHHHHHHHHcCCCcEEEEEeC
Confidence 753322211 13899999999999999999753
No 44
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.53 E-value=3.2e-15 Score=136.19 Aligned_cols=140 Identities=14% Similarity=0.155 Sum_probs=85.7
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
++.+|||+|||+|.++..+++.+|+.+++|+|+|+.+++.|++++...+. |++++++|+.+.++... ...++||.|++
T Consensus 30 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~-~~~~~fD~i~~ 107 (215)
T 4dzr_A 30 SGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGA-VVDWAAADGIEWLIERA-ERGRPWHAIVS 107 (215)
T ss_dssp TTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC--------------------CCHHHHHHHHHHHH-HTTCCBSEEEE
T ss_pred CCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCC-ceEEEEcchHhhhhhhh-hccCcccEEEE
Confidence 46899999999999999999999999999999999999999999988887 89999999987532110 02378999998
Q ss_pred eCCCCCCCCc--ch----------hhhh--------hHHHHHHHHHhhccCCeE-EEEEeCcHHHHHHHHHHHH--HcCC
Q 014711 310 QCPNPDFNRP--EH----------RWRM--------VQRSLVEAVSDLLVHDGK-VFLQSDIEEVMLRMKQQFL--EYGK 366 (420)
Q Consensus 310 ~fpdp~~k~~--~~----------k~Rl--------~~~~~l~~i~~~LkpgG~-l~~~td~~~~~~~~~~~l~--~~g~ 366 (420)
+.| ++... ++ ...+ ....+++.+.++|||||+ +++.+.. ...+.+.+.+. +.+|
T Consensus 108 npp--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~-~~~~~~~~~l~~~~~gf 184 (215)
T 4dzr_A 108 NPP--YIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGH-NQADEVARLFAPWRERG 184 (215)
T ss_dssp CCC--CCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTT-SCHHHHHHHTGGGGGGT
T ss_pred CCC--CCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECC-ccHHHHHHHHHHhhcCC
Confidence 733 32111 10 0000 115889999999999999 7776643 33556777788 7887
Q ss_pred ceeEeecc
Q 014711 367 GKLVLVQD 374 (420)
Q Consensus 367 ~~~~~~~D 374 (420)
....+..|
T Consensus 185 ~~~~~~~~ 192 (215)
T 4dzr_A 185 FRVRKVKD 192 (215)
T ss_dssp EECCEEEC
T ss_pred ceEEEEEe
Confidence 65554444
No 45
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.53 E-value=1e-13 Score=130.40 Aligned_cols=127 Identities=13% Similarity=0.086 Sum_probs=102.1
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCc-EEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITN-GYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~n-v~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
++.+|||||||+|.++..+++..|. +++|+|+|+.+++.|++++...++.+ ++++++|+.++ +.++++||.|+
T Consensus 46 ~~~~vLDiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-----~~~~~~fD~v~ 119 (257)
T 3f4k_A 46 DDAKIADIGCGTGGQTLFLADYVKG-QITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNL-----PFQNEELDLIW 119 (257)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHCCS-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC-----SSCTTCEEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhC-----CCCCCCEEEEE
Confidence 4679999999999999999999875 99999999999999999999999876 99999999765 22578999999
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCc-------H---H----------HHHHHHHHHHHcCCce
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI-------E---E----------VMLRMKQQFLEYGKGK 368 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~-------~---~----------~~~~~~~~l~~~g~~~ 368 (420)
+...-.+. . ...+++.+.++|||||++++.+-. . . ..++..+.+++.||..
T Consensus 120 ~~~~l~~~-~--------~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~ 190 (257)
T 3f4k_A 120 SEGAIYNI-G--------FERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMDAYPEISVIPTCIDKMERAGYTP 190 (257)
T ss_dssp EESCSCCC-C--------HHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCCBHHHHHHHHHHTTEEE
T ss_pred ecChHhhc-C--------HHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCeE
Confidence 88544432 1 147999999999999999987511 0 0 1245677888999876
Q ss_pred eEe
Q 014711 369 LVL 371 (420)
Q Consensus 369 ~~~ 371 (420)
+.+
T Consensus 191 v~~ 193 (257)
T 3f4k_A 191 TAH 193 (257)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 46
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.53 E-value=2.7e-13 Score=120.19 Aligned_cols=119 Identities=14% Similarity=0.157 Sum_probs=101.5
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
++.+|||+|||+|.++..+++ +..+++|+|+|+.+++.|++++...+++|++++++|+.+.+ +++++|.|++
T Consensus 35 ~~~~vLdiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~------~~~~~D~i~~ 106 (183)
T 2yxd_A 35 KDDVVVDVGCGSGGMTVEIAK--RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDVL------DKLEFNKAFI 106 (183)
T ss_dssp TTCEEEEESCCCSHHHHHHHT--TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHHG------GGCCCSEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHh--cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccccc------cCCCCcEEEE
Confidence 467999999999999999998 78999999999999999999999999889999999998742 2468999998
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHHHHHHHHHHHHcCCceeE
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGKLV 370 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~~~~~~~~l~~~g~~~~~ 370 (420)
+.+ .+ ...+++.+.+. |||.+++.+........+.+.++++|+....
T Consensus 107 ~~~------~~------~~~~l~~~~~~--~gG~l~~~~~~~~~~~~~~~~l~~~g~~~~~ 153 (183)
T 2yxd_A 107 GGT------KN------IEKIIEILDKK--KINHIVANTIVLENAAKIINEFESRGYNVDA 153 (183)
T ss_dssp CSC------SC------HHHHHHHHHHT--TCCEEEEEESCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCc------cc------HHHHHHHHhhC--CCCEEEEEecccccHHHHHHHHHHcCCeEEE
Confidence 755 11 14788888888 9999999887777788899999999975543
No 47
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.53 E-value=4.8e-14 Score=132.67 Aligned_cols=127 Identities=17% Similarity=0.220 Sum_probs=99.6
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCC-cEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGIT-NGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~-nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
++.+|||||||+|.++..+++.+ +.+++|+|+|+.+++.|++++...++. |+.++++|+.++ + .+++||.|+
T Consensus 36 ~~~~VLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~-----~-~~~~fD~V~ 108 (256)
T 1nkv_A 36 PGTRILDLGSGSGEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGY-----V-ANEKCDVAA 108 (256)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTC-----C-CSSCEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhC-----C-cCCCCCEEE
Confidence 46799999999999999999987 679999999999999999999988885 899999999876 2 267899998
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCc-------HHH--------------HHHHHHHHHHcCCc
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI-------EEV--------------MLRMKQQFLEYGKG 367 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~-------~~~--------------~~~~~~~l~~~g~~ 367 (420)
+...-.+..+ ...+|+++.++|||||++++.... ..+ ..++.+.+++.||.
T Consensus 109 ~~~~~~~~~~--------~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 180 (256)
T 1nkv_A 109 CVGATWIAGG--------FAGAEELLAQSLKPGGIMLIGEPYWRQLPATEEIAQACGVSSTSDFLTLPGLVGAFDDLGYD 180 (256)
T ss_dssp EESCGGGTSS--------SHHHHHHHTTSEEEEEEEEEEEEEETTCCSSHHHHHTTTCSCGGGSCCHHHHHHHHHTTTBC
T ss_pred ECCChHhcCC--------HHHHHHHHHHHcCCCeEEEEecCcccCCCChHHHHHHHhcccccccCCHHHHHHHHHHCCCe
Confidence 8532221111 138999999999999999986311 111 14577888899987
Q ss_pred eeEe
Q 014711 368 KLVL 371 (420)
Q Consensus 368 ~~~~ 371 (420)
.+.+
T Consensus 181 ~~~~ 184 (256)
T 1nkv_A 181 VVEM 184 (256)
T ss_dssp CCEE
T ss_pred eEEE
Confidence 6543
No 48
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.52 E-value=8.8e-14 Score=124.38 Aligned_cols=120 Identities=13% Similarity=0.225 Sum_probs=98.4
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCc--EEEEEcChhhhhhhhhccCCCeEeEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITN--GYFIATNATSTFRSIVASYPGKLILV 307 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~n--v~~~~~Da~~~~~~~~~~~~~~~d~i 307 (420)
++.+|||+|||+|.++..+++. ..+++|+|+|+.+++.|++++...+++| ++++++|+.+.+ .++++|.|
T Consensus 52 ~~~~vLdiG~G~G~~~~~~~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~------~~~~~D~v 123 (194)
T 1dus_A 52 KDDDILDLGCGYGVIGIALADE--VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENV------KDRKYNKI 123 (194)
T ss_dssp TTCEEEEETCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTC------TTSCEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhccc------ccCCceEE
Confidence 4679999999999999999988 7899999999999999999999889887 999999997752 36789999
Q ss_pred EEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHHHHHHHHHHHHc
Q 014711 308 SIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEY 364 (420)
Q Consensus 308 ~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~~~~~~~~l~~~ 364 (420)
+++. |++.. . -....+++.+.+.|+|||.+++.+.......++.+.+++.
T Consensus 124 ~~~~--~~~~~---~--~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~ 173 (194)
T 1dus_A 124 ITNP--PIRAG---K--EVLHRIIEEGKELLKDNGEIWVVIQTKQGAKSLAKYMKDV 173 (194)
T ss_dssp EECC--CSTTC---H--HHHHHHHHHHHHHEEEEEEEEEEEESTHHHHHHHHHHHHH
T ss_pred EECC--Ccccc---h--hHHHHHHHHHHHHcCCCCEEEEEECCCCChHHHHHHHHHH
Confidence 9863 33111 0 1124799999999999999999887766666677777776
No 49
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.52 E-value=5.6e-14 Score=131.55 Aligned_cols=156 Identities=15% Similarity=0.158 Sum_probs=117.4
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCC-CcEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGI-TNGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l-~nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
.+.+|||+|||+|.++..+++. ..+++++|+|+.+++.|+++....++ .|+.++++|+.+.. + .+..+|.|+
T Consensus 91 ~~~~vldiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~---~--~~~~~D~v~ 163 (248)
T 2yvl_A 91 KEKRVLEFGTGSGALLAVLSEV--AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAE---V--PEGIFHAAF 163 (248)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSC---C--CTTCBSEEE
T ss_pred CCCEEEEeCCCccHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcc---c--CCCcccEEE
Confidence 4679999999999999999998 78999999999999999999988887 68999999997752 1 256799999
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHHHHHHHHHHHHcCCceeEeeccccccccCCCCCCCC
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGKLVLVQDECDTKTNQGGWLGE 388 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~~~~~~~~l~~~g~~~~~~~~D~~~~~~~~~~~~~~ 388 (420)
++.|+|+ .+++.+.+.|+|||++++.+....+...+.+.+.+. |......+... + .|. .
T Consensus 164 ~~~~~~~-------------~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~-f~~~~~~~~~~----~--~~~-~ 222 (248)
T 2yvl_A 164 VDVREPW-------------HYLEKVHKSLMEGAPVGFLLPTANQVIKLLESIENY-FGNLEVVEILH----R--HYK-T 222 (248)
T ss_dssp ECSSCGG-------------GGHHHHHHHBCTTCEEEEEESSHHHHHHHHHHSTTT-EEEEEEEEEEE----E--EEC-C
T ss_pred ECCcCHH-------------HHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhh-CCcceEEEeee----e--Eee-c
Confidence 9877665 788999999999999999998777777788877776 54443322210 0 121 1
Q ss_pred CCCCCCCHHHHHHHHCCCCeEEEEEEeCC
Q 014711 389 NSFGVRSDWEQHVIDRGAPMYRLMLSKPS 417 (420)
Q Consensus 389 ~~~~~~T~~E~~~~~~G~~i~~~~~~k~~ 417 (420)
.+...+..+ ...|++.|-+.++|++
T Consensus 223 ~~~~~~~~~----~~~~~~~~l~~~rk~~ 247 (248)
T 2yvl_A 223 ISERFRPED----QMVAHTAYLVFGRKLK 247 (248)
T ss_dssp CGGGCCBCS----EEECCSCEEEEEEECC
T ss_pred ccCccCCCc----cCCCccEEEEEEEecc
Confidence 111111111 1467888988888864
No 50
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.52 E-value=1.5e-13 Score=128.13 Aligned_cols=126 Identities=10% Similarity=0.061 Sum_probs=97.1
Q ss_pred CCCEEEEEcCCccHHHHHHHHhC-CCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKR-KDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~-P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
.+.+|||+|||+|.++..+++.+ |..+++|+|+|+.+++.+.+++... .|+.++++|+.+... ++..+++||.|+
T Consensus 77 ~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~--~~v~~~~~d~~~~~~--~~~~~~~~D~V~ 152 (233)
T 2ipx_A 77 PGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR--TNIIPVIEDARHPHK--YRMLIAMVDVIF 152 (233)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC--TTEEEECSCTTCGGG--GGGGCCCEEEEE
T ss_pred CCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc--CCeEEEEcccCChhh--hcccCCcEEEEE
Confidence 46799999999999999999986 7889999999999998888887765 689999999987421 122367899999
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHH----------HHHHHHHHHHHcCCceeE
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEE----------VMLRMKQQFLEYGKGKLV 370 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~----------~~~~~~~~l~~~g~~~~~ 370 (420)
++.+.|+ ....++.++.+.|||||.+++.+.... +..+ .+.+++.||....
T Consensus 153 ~~~~~~~----------~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~-~~~l~~~Gf~~~~ 213 (233)
T 2ipx_A 153 ADVAQPD----------QTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASE-VKKMQQENMKPQE 213 (233)
T ss_dssp ECCCCTT----------HHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSCHHHHHHHH-HHTTGGGTEEEEE
T ss_pred EcCCCcc----------HHHHHHHHHHHHcCCCeEEEEEEcccccccCCCHHHHHHHH-HHHHHHCCCceEE
Confidence 9766443 112568889999999999999653321 3333 5677788887654
No 51
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.51 E-value=1.7e-13 Score=127.68 Aligned_cols=126 Identities=12% Similarity=0.073 Sum_probs=95.7
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
.+.+|||+|||+|.++..+|+.+|..+|+|+|+|+.+++.|++++... .|+.++++|+.+.. .+.+ ...+||.|+.
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~--~~v~~~~~d~~~~~-~~~~-~~~~~D~v~~ 149 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER--ENIIPILGDANKPQ-EYAN-IVEKVDVIYE 149 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC--TTEEEEECCTTCGG-GGTT-TSCCEEEEEE
T ss_pred CCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC--CCeEEEECCCCCcc-cccc-cCccEEEEEE
Confidence 467899999999999999999988889999999999999999987654 78999999998731 1122 1368999986
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeC-----c----HH-HHHHHHHHHHHcCCceeE
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSD-----I----EE-VMLRMKQQFLEYGKGKLV 370 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td-----~----~~-~~~~~~~~l~~~g~~~~~ 370 (420)
..++|- ....+++.+.+.|||||++++... . .. +.+++. .+.+.||....
T Consensus 150 ~~~~~~----------~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~l~-~l~~~Gf~~~~ 209 (230)
T 1fbn_A 150 DVAQPN----------QAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKE-ILEAGGFKIVD 209 (230)
T ss_dssp CCCSTT----------HHHHHHHHHHHHEEEEEEEEEEEEGGGTCSSSCHHHHHHHHHH-HHHHHTEEEEE
T ss_pred ecCChh----------HHHHHHHHHHHhCCCCcEEEEEEecCCCCCCCCHHHhhHHHHH-HHHHCCCEEEE
Confidence 554441 123789999999999999998521 1 11 224444 78888876544
No 52
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.51 E-value=8e-14 Score=132.82 Aligned_cols=132 Identities=14% Similarity=0.150 Sum_probs=99.9
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHH---hCCC-cEEEEEcChhhhhhhhh--ccCCCe
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQL---SGIT-NGYFIATNATSTFRSIV--ASYPGK 303 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~---~~l~-nv~~~~~Da~~~~~~~~--~~~~~~ 303 (420)
.+.+|||+|||+|.+++.+++++|..+++|+|+++.+++.|++++.. +++. ++.++++|+.+...... ...+++
T Consensus 36 ~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~ 115 (260)
T 2ozv_A 36 RACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDEH 115 (260)
T ss_dssp SCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTTC
T ss_pred CCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCCC
Confidence 35789999999999999999999999999999999999999999988 7776 59999999988643210 014678
Q ss_pred EeEEEEeCCCCCCCCc-----ch-------hhhhhHHHHHHHHHhhccCCeEEEEEeCcHHHHHHHHHHHHHc
Q 014711 304 LILVSIQCPNPDFNRP-----EH-------RWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEY 364 (420)
Q Consensus 304 ~d~i~~~fpdp~~k~~-----~~-------k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~~~~~~~~l~~~ 364 (420)
||.|+++ .|++... .. ........+++.+.++|||||+|++...... ..++.+.+.+.
T Consensus 116 fD~Vv~n--PPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~-~~~~~~~l~~~ 185 (260)
T 2ozv_A 116 FHHVIMN--PPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQS-VAEIIAACGSR 185 (260)
T ss_dssp EEEEEEC--CCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGGG-HHHHHHHHTTT
T ss_pred cCEEEEC--CCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHHH-HHHHHHHHHhc
Confidence 9999997 3443221 00 0011235899999999999999999887654 45567777664
No 53
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.51 E-value=1.1e-13 Score=124.76 Aligned_cols=109 Identities=11% Similarity=0.090 Sum_probs=88.5
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
++.+|||+|||+|.+++.+++. +..+++|+|+|+.+++.|++++...++.|++++++|+.++... + .+++||.|++
T Consensus 44 ~~~~vLDlgcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~--~~~~fD~i~~ 119 (189)
T 3p9n_A 44 TGLAVLDLYAGSGALGLEALSR-GAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAA-G--TTSPVDLVLA 119 (189)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT-TCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHH-C--CSSCCSEEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhh-c--cCCCccEEEE
Confidence 4689999999999999988875 5668999999999999999999999998999999999987432 2 3678999988
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHh--hccCCeEEEEEeC
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSD--LLVHDGKVFLQSD 349 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~--~LkpgG~l~~~td 349 (420)
+. |+.... . ...+++..+.+ +|+|||.+++.+.
T Consensus 120 ~~--p~~~~~-~----~~~~~l~~~~~~~~L~pgG~l~~~~~ 154 (189)
T 3p9n_A 120 DP--PYNVDS-A----DVDAILAALGTNGWTREGTVAVVERA 154 (189)
T ss_dssp CC--CTTSCH-H----HHHHHHHHHHHSSSCCTTCEEEEEEE
T ss_pred CC--CCCcch-h----hHHHHHHHHHhcCccCCCeEEEEEec
Confidence 63 332110 0 12478888988 9999999999874
No 54
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.51 E-value=1.1e-13 Score=136.55 Aligned_cols=120 Identities=14% Similarity=0.130 Sum_probs=97.8
Q ss_pred CCCEEEEEcCCccHHHHHHHHh-CCCCeEEEEeCChHHHHHHHHHhHHhC-----------CCcEEEEEcChhhhhhhhh
Q 014711 230 AQPLVVDIGSGNGLFLLGMARK-RKDLNFLGLEVNGKLVTHCRDSLQLSG-----------ITNGYFIATNATSTFRSIV 297 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~-~P~~~viGiDis~~~i~~A~~~~~~~~-----------l~nv~~~~~Da~~~~~~~~ 297 (420)
.+.+|||+|||+|.++..+++. .|+.+++|+|+++.+++.|++++...+ ..|++++++|+.+.... +
T Consensus 105 ~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~-~ 183 (336)
T 2b25_A 105 PGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATED-I 183 (336)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC----
T ss_pred CCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccc-c
Confidence 4679999999999999999998 588999999999999999999987643 35899999999875311 2
Q ss_pred ccCCCeEeEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHHHHHHHHHHHHcC
Q 014711 298 ASYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYG 365 (420)
Q Consensus 298 ~~~~~~~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~~~~~~~~l~~~g 365 (420)
++++||.|+++.++|| .+++.+.++|+|||.|++.+..........+.+.+++
T Consensus 184 --~~~~fD~V~~~~~~~~-------------~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~~ 236 (336)
T 2b25_A 184 --KSLTFDAVALDMLNPH-------------VTLPVFYPHLKHGGVCAVYVVNITQVIELLDGIRTCE 236 (336)
T ss_dssp ------EEEEEECSSSTT-------------TTHHHHGGGEEEEEEEEEEESSHHHHHHHHHHHHHHT
T ss_pred --CCCCeeEEEECCCCHH-------------HHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhcC
Confidence 3568999999888887 5789999999999999998877777777777777543
No 55
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.51 E-value=4.9e-14 Score=135.67 Aligned_cols=122 Identities=13% Similarity=0.109 Sum_probs=101.1
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCc-EEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITN-GYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~n-v~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
++.+|||+|||+|.+++.+|+..+. +|+|+|+|+.+++.|++++..+++.| ++++++|+.++. .+.+||.|+
T Consensus 125 ~~~~VLDlgcG~G~~~~~la~~~~~-~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~------~~~~fD~Vi 197 (278)
T 2frn_A 125 PDELVVDMFAGIGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP------GENIADRIL 197 (278)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC------CCSCEEEEE
T ss_pred CCCEEEEecccCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhc------ccCCccEEE
Confidence 3689999999999999999999765 89999999999999999999999886 999999998863 267899998
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCc------HHHHHHHHHHHHHcCCceeE
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI------EEVMLRMKQQFLEYGKGKLV 370 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~------~~~~~~~~~~l~~~g~~~~~ 370 (420)
++.|... ..++..+.++|||||.+++.+.. ....+.+.+.+++.|+....
T Consensus 198 ~~~p~~~------------~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 198 MGYVVRT------------HEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp ECCCSSG------------GGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEE
T ss_pred ECCchhH------------HHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcCCeeEE
Confidence 8643211 26889999999999999997643 24556778888898887543
No 56
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.51 E-value=1.3e-13 Score=133.39 Aligned_cols=101 Identities=10% Similarity=0.095 Sum_probs=85.8
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
.+.+|||||||+|.++..++.+.++.+|+|+|+|+++++.|++++.+.++.|++|+++|+.++ ++++||.|++
T Consensus 122 ~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l-------~d~~FDvV~~ 194 (298)
T 3fpf_A 122 RGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVI-------DGLEFDVLMV 194 (298)
T ss_dssp TTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGG-------GGCCCSEEEE
T ss_pred CcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhC-------CCCCcCEEEE
Confidence 478999999999988766555668999999999999999999999998988899999999875 2578999987
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEe
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 348 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~t 348 (420)
...-| . ..++++++.+.|||||+|++..
T Consensus 195 ~a~~~-----d------~~~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 195 AALAE-----P------KRRVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp CTTCS-----C------HHHHHHHHHHHCCTTCEEEEEE
T ss_pred CCCcc-----C------HHHHHHHHHHHcCCCcEEEEEc
Confidence 64311 1 1389999999999999999976
No 57
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.51 E-value=6.4e-13 Score=118.51 Aligned_cols=121 Identities=15% Similarity=0.249 Sum_probs=102.1
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCC-CcEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGI-TNGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l-~nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
++..|||+|||+|.++..+++.. .+++|+|+|+.+++.|++++...++ .++.++++|+.+.++ ...++|.|+
T Consensus 33 ~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-----~~~~~D~v~ 105 (192)
T 1l3i_A 33 KNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALC-----KIPDIDIAV 105 (192)
T ss_dssp TTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHT-----TSCCEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcc-----cCCCCCEEE
Confidence 46799999999999999999986 8999999999999999999998888 789999999977421 125899998
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHHHHHHHHHHHHcCCce
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGK 368 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~~~~~~~~l~~~g~~~ 368 (420)
+..+.++ . ..+++.+.+.|+|||.+++.+........+.+.++++||..
T Consensus 106 ~~~~~~~-----~------~~~l~~~~~~l~~gG~l~~~~~~~~~~~~~~~~l~~~g~~~ 154 (192)
T 1l3i_A 106 VGGSGGE-----L------QEILRIIKDKLKPGGRIIVTAILLETKFEAMECLRDLGFDV 154 (192)
T ss_dssp ESCCTTC-----H------HHHHHHHHHTEEEEEEEEEEECBHHHHHHHHHHHHHTTCCC
T ss_pred ECCchHH-----H------HHHHHHHHHhcCCCcEEEEEecCcchHHHHHHHHHHCCCce
Confidence 8743221 1 48999999999999999998877777788899999999843
No 58
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.51 E-value=9.8e-14 Score=127.63 Aligned_cols=107 Identities=10% Similarity=0.051 Sum_probs=85.7
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCC-----cEEEEEcChhhhhhhhhccCCCeE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGIT-----NGYFIATNATSTFRSIVASYPGKL 304 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~-----nv~~~~~Da~~~~~~~~~~~~~~~ 304 (420)
.+.+|||||||+|.++..+++..|..+++|+|+|+.+++.|++++...+++ |+.++++|+... +..+++|
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~-----~~~~~~f 103 (217)
T 3jwh_A 29 NARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQ-----DKRFHGY 103 (217)
T ss_dssp TCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSC-----CGGGCSC
T ss_pred CCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccc-----cccCCCc
Confidence 467999999999999999999988899999999999999999998877765 799999998543 1135789
Q ss_pred eEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 305 ILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 305 d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
|.|++...-.+.... ....+++.+.++|||||.+++.
T Consensus 104 D~v~~~~~l~~~~~~------~~~~~l~~~~~~LkpgG~li~~ 140 (217)
T 3jwh_A 104 DAATVIEVIEHLDLS------RLGAFERVLFEFAQPKIVIVTT 140 (217)
T ss_dssp SEEEEESCGGGCCHH------HHHHHHHHHHTTTCCSEEEEEE
T ss_pred CEEeeHHHHHcCCHH------HHHHHHHHHHHHcCCCEEEEEc
Confidence 999987432221110 1147999999999999976654
No 59
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.51 E-value=7.4e-14 Score=132.05 Aligned_cols=103 Identities=17% Similarity=0.290 Sum_probs=87.2
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
.+.+|||||||+|.++..+++..+ +++|+|+|+.+++.|++++...+++|+.++++|+.++ ++++++||.|++
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l-----~~~~~~fD~V~~ 109 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFAPFVK--KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQM-----PFTDERFHIVTC 109 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CC-----CSCTTCEEEEEE
T ss_pred CCCEEEEEeCCCCHHHHHHHHhCC--EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhC-----CCCCCCEEEEEE
Confidence 468999999999999999999864 8999999999999999999988988999999999875 225789999998
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
++.-.|..+. ..+++++.++|||||+|++.
T Consensus 110 ~~~l~~~~d~--------~~~l~~~~r~LkpgG~l~~~ 139 (260)
T 1vl5_A 110 RIAAHHFPNP--------ASFVSEAYRVLKKGGQLLLV 139 (260)
T ss_dssp ESCGGGCSCH--------HHHHHHHHHHEEEEEEEEEE
T ss_pred hhhhHhcCCH--------HHHHHHHHHHcCCCCEEEEE
Confidence 8544332211 38999999999999999985
No 60
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.51 E-value=4.1e-13 Score=123.89 Aligned_cols=105 Identities=13% Similarity=0.095 Sum_probs=82.9
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
++.+|||+|||+|.++..+|+..+..+|+|+|+|+.+++.+.+++.+. .|+.++++|+... ..+.+ ..++||.|++
T Consensus 57 ~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~--~~v~~~~~d~~~~-~~~~~-~~~~fD~V~~ 132 (210)
T 1nt2_A 57 GDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER--NNIIPLLFDASKP-WKYSG-IVEKVDLIYQ 132 (210)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC--SSEEEECSCTTCG-GGTTT-TCCCEEEEEE
T ss_pred CCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC--CCeEEEEcCCCCc-hhhcc-cccceeEEEE
Confidence 467999999999999999999988789999999999988777766543 5899999999764 11111 2478999998
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEe
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 348 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~t 348 (420)
+.++|. ....++++++++|||||+|++..
T Consensus 133 ~~~~~~----------~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 133 DIAQKN----------QIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp CCCSTT----------HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eccChh----------HHHHHHHHHHHHhCCCCEEEEEE
Confidence 754442 11246899999999999999974
No 61
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.50 E-value=1.9e-13 Score=127.69 Aligned_cols=103 Identities=18% Similarity=0.282 Sum_probs=88.2
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCC-cEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGIT-NGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~-nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
.+.+|||||||+|.++..+|+..|+.+++|+|+++.+++.|++++...++. |++++++|+.+.++.. .+++||.|+
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~---~~~~fD~V~ 147 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENV---NDKVYDMIF 147 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHH---TTSCEEEEE
T ss_pred CCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhh---ccCCccEEE
Confidence 367999999999999999999889999999999999999999999999986 8999999998864301 267899999
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEE
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFL 346 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~ 346 (420)
+..+.+. .+.+++.+.+.|||||.|++
T Consensus 148 ~~~~~~~-----------~~~~l~~~~~~LkpgG~lv~ 174 (232)
T 3ntv_A 148 IDAAKAQ-----------SKKFFEIYTPLLKHQGLVIT 174 (232)
T ss_dssp EETTSSS-----------HHHHHHHHGGGEEEEEEEEE
T ss_pred EcCcHHH-----------HHHHHHHHHHhcCCCeEEEE
Confidence 8743221 24799999999999999988
No 62
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.50 E-value=1.4e-13 Score=126.66 Aligned_cols=107 Identities=9% Similarity=0.142 Sum_probs=85.3
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCC-----cEEEEEcChhhhhhhhhccCCCeE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGIT-----NGYFIATNATSTFRSIVASYPGKL 304 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~-----nv~~~~~Da~~~~~~~~~~~~~~~ 304 (420)
++.+|||||||+|.++..+++..|..+++|+|+|+.+++.|++++...+++ ++.++++|+... +..+++|
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~-----~~~~~~f 103 (219)
T 3jwg_A 29 NAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYR-----DKRFSGY 103 (219)
T ss_dssp TCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSC-----CGGGTTC
T ss_pred CCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccccc-----ccccCCC
Confidence 467999999999999999999988899999999999999999998877665 799999999554 1135789
Q ss_pred eEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 305 ILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 305 d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
|.|++...-.+.... ....+++++.++|||||.++..
T Consensus 104 D~V~~~~~l~~~~~~------~~~~~l~~~~~~LkpgG~~i~~ 140 (219)
T 3jwg_A 104 DAATVIEVIEHLDEN------RLQAFEKVLFEFTRPQTVIVST 140 (219)
T ss_dssp SEEEEESCGGGCCHH------HHHHHHHHHHTTTCCSEEEEEE
T ss_pred CEEEEHHHHHhCCHH------HHHHHHHHHHHhhCCCEEEEEc
Confidence 999987432221110 1137999999999999966654
No 63
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.49 E-value=1.7e-13 Score=127.47 Aligned_cols=102 Identities=16% Similarity=0.155 Sum_probs=86.4
Q ss_pred CCEEEEEcCCccHHHHHHHHhCC-CCeEEEEeCChHHHHHHHHHhHHhCCC--cEEEEEcChhhhhhhhhccCCCeEeEE
Q 014711 231 QPLVVDIGSGNGLFLLGMARKRK-DLNFLGLEVNGKLVTHCRDSLQLSGIT--NGYFIATNATSTFRSIVASYPGKLILV 307 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~~P-~~~viGiDis~~~i~~A~~~~~~~~l~--nv~~~~~Da~~~~~~~~~~~~~~~d~i 307 (420)
+++|||||||+|.+++.||+..| +.+++++|+|+.+++.|++++.+.++. |++++++|+.+.++.. .+++||.|
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~---~~~~fD~V 133 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRL---ANDSYQLV 133 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGS---CTTCEEEE
T ss_pred CCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHh---cCCCcCeE
Confidence 45899999999999999999875 889999999999999999999999986 7999999998875321 36789999
Q ss_pred EEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEE
Q 014711 308 SIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFL 346 (420)
Q Consensus 308 ~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~ 346 (420)
++. ++. . ..+.+++.+.+.|||||.+++
T Consensus 134 ~~d---~~~--~------~~~~~l~~~~~~LkpGG~lv~ 161 (221)
T 3dr5_A 134 FGQ---VSP--M------DLKALVDAAWPLLRRGGALVL 161 (221)
T ss_dssp EEC---CCT--T------THHHHHHHHHHHEEEEEEEEE
T ss_pred EEc---CcH--H------HHHHHHHHHHHHcCCCcEEEE
Confidence 875 321 1 124789999999999999998
No 64
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.49 E-value=3.2e-13 Score=131.68 Aligned_cols=135 Identities=16% Similarity=0.171 Sum_probs=103.2
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHH----hCCCcEEEEEcChhhhhhhhhccCCCeEe
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQL----SGITNGYFIATNATSTFRSIVASYPGKLI 305 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~----~~l~nv~~~~~Da~~~~~~~~~~~~~~~d 305 (420)
++.+|||||||+|.++..+++..|..+++++|+++.+++.|++++.. ....+++++++|+.+++... .+++||
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~---~~~~fD 171 (304)
T 3bwc_A 95 KPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQT---PDNTYD 171 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSS---CTTCEE
T ss_pred CCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhc---cCCcee
Confidence 46799999999999999999887888999999999999999998743 12357999999998874211 367899
Q ss_pred EEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcH----HHHHHHHHHHHHcCCceeEe
Q 014711 306 LVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIE----EVMLRMKQQFLEYGKGKLVL 371 (420)
Q Consensus 306 ~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~----~~~~~~~~~l~~~g~~~~~~ 371 (420)
.|++..++|+. +...+...++++.+.++|||||.|++.+... .....+.+.+++.||..+.+
T Consensus 172 vIi~d~~~~~~----~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~GF~~v~~ 237 (304)
T 3bwc_A 172 VVIIDTTDPAG----PASKLFGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRETGFASVQY 237 (304)
T ss_dssp EEEEECC-------------CCHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHHTCSEEEE
T ss_pred EEEECCCCccc----cchhhhHHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHHhCCCCcEEE
Confidence 99998887752 1223445689999999999999999987543 34566788888888865443
No 65
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.49 E-value=6.6e-14 Score=135.52 Aligned_cols=117 Identities=16% Similarity=0.177 Sum_probs=87.4
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCC------------------------------
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGI------------------------------ 279 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l------------------------------ 279 (420)
.+.+|||||||+|.++..+|+.+|..+|+|+|+|+.+++.|++++...+.
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 36789999999999999999999999999999999999999998765432
Q ss_pred ----------------------------CcEEEEEcChhhhhhhhhccCCCeEeEEEEeCCCCCCCCcchh-hhhhHHHH
Q 014711 280 ----------------------------TNGYFIATNATSTFRSIVASYPGKLILVSIQCPNPDFNRPEHR-WRMVQRSL 330 (420)
Q Consensus 280 ----------------------------~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~~fpdp~~k~~~~k-~Rl~~~~~ 330 (420)
.|++|+++|+........+..+++||.|++...-.|. |.. ..-....+
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~i---hl~~~~~~~~~~ 202 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWV---HLNWGDEGLKRM 202 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHH---HHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHh---hhcCCHHHHHHH
Confidence 4899999999754222222257899999987433221 100 00112479
Q ss_pred HHHHHhhccCCeEEEEEeC
Q 014711 331 VEAVSDLLVHDGKVFLQSD 349 (420)
Q Consensus 331 l~~i~~~LkpgG~l~~~td 349 (420)
+++++++|||||+|++.+.
T Consensus 203 l~~~~~~LkpGG~lil~~~ 221 (292)
T 3g07_A 203 FRRIYRHLRPGGILVLEPQ 221 (292)
T ss_dssp HHHHHHHEEEEEEEEEECC
T ss_pred HHHHHHHhCCCcEEEEecC
Confidence 9999999999999999753
No 66
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.49 E-value=4e-13 Score=128.83 Aligned_cols=106 Identities=18% Similarity=0.233 Sum_probs=87.7
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCC-CcEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGI-TNGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l-~nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
.+.+|||||||+|.++..+++. ..+++|+|+|+.+++.|++++...++ .|+.++++|+.++. . + .+++||.|+
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~-~--~~~~fD~v~ 141 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAER--GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVA-S-H--LETPVDLIL 141 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTG-G-G--CSSCEEEEE
T ss_pred CCCEEEEeCCcchHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhh-h-h--cCCCceEEE
Confidence 3579999999999999999988 67999999999999999999988888 68999999998872 1 2 478999999
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeC
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSD 349 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td 349 (420)
+...-.+..+ + ..+++++.++|||||++++.+.
T Consensus 142 ~~~~l~~~~~--~------~~~l~~~~~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 142 FHAVLEWVAD--P------RSVLQTLWSVLRPGGVLSLMFY 174 (285)
T ss_dssp EESCGGGCSC--H------HHHHHHHHHTEEEEEEEEEEEE
T ss_pred ECchhhcccC--H------HHHHHHHHHHcCCCeEEEEEEe
Confidence 8743333211 1 3799999999999999999763
No 67
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.49 E-value=1.1e-13 Score=126.07 Aligned_cols=118 Identities=14% Similarity=0.033 Sum_probs=95.1
Q ss_pred CCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEEe
Q 014711 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQ 310 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~~ 310 (420)
+.+|||+|||+|.++..+++.+|+.+++|+|+|+.+++.|++++...+++|++++++|+.+.. ++++||.|+++
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~------~~~~~D~i~~~ 139 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP------SEPPFDGVISR 139 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC------CCSCEEEEECS
T ss_pred CCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC------ccCCcCEEEEe
Confidence 578999999999999999999999999999999999999999999999989999999998752 35789999875
Q ss_pred CCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHHHHHHHHHHHHcCCcee
Q 014711 311 CPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGKL 369 (420)
Q Consensus 311 fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~~~~~~~~l~~~g~~~~ 369 (420)
...+ ...+++.+.+.|+|||.+++.... ...+++.+.+. +|...
T Consensus 140 ~~~~------------~~~~l~~~~~~L~~gG~l~~~~~~-~~~~~~~~~~~--g~~~~ 183 (207)
T 1jsx_A 140 AFAS------------LNDMVSWCHHLPGEQGRFYALKGQ-MPEDEIALLPE--EYQVE 183 (207)
T ss_dssp CSSS------------HHHHHHHHTTSEEEEEEEEEEESS-CCHHHHHTSCT--TEEEE
T ss_pred ccCC------------HHHHHHHHHHhcCCCcEEEEEeCC-CchHHHHHHhc--CCcee
Confidence 2211 137999999999999999998643 22344444433 55543
No 68
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.49 E-value=2.2e-13 Score=125.76 Aligned_cols=107 Identities=13% Similarity=0.096 Sum_probs=88.4
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCC-CCeEEEEeCChHHHHHHHHHhHHhCCCc-EEEEEcChhhhhhhhhccCCCeEeEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRK-DLNFLGLEVNGKLVTHCRDSLQLSGITN-GYFIATNATSTFRSIVASYPGKLILV 307 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P-~~~viGiDis~~~i~~A~~~~~~~~l~n-v~~~~~Da~~~~~~~~~~~~~~~d~i 307 (420)
.+.+|||||||+|.++..+|+..| +.+++|+|+++.+++.|++++.+.++.| ++++++|+.+.++........+||.|
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~v 137 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDFI 137 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSEE
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCEE
Confidence 367899999999999999999988 7899999999999999999999999875 99999999887543321112679999
Q ss_pred EEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 308 SIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 308 ~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
++..+.+ ..+.+++.+.+.|+|||.+++.
T Consensus 138 ~~d~~~~-----------~~~~~l~~~~~~L~pgG~lv~~ 166 (223)
T 3duw_A 138 FIDADKQ-----------NNPAYFEWALKLSRPGTVIIGD 166 (223)
T ss_dssp EECSCGG-----------GHHHHHHHHHHTCCTTCEEEEE
T ss_pred EEcCCcH-----------HHHHHHHHHHHhcCCCcEEEEe
Confidence 8853311 1248999999999999988874
No 69
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.49 E-value=2.2e-13 Score=123.70 Aligned_cols=123 Identities=16% Similarity=0.120 Sum_probs=94.8
Q ss_pred CCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEEe
Q 014711 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQ 310 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~~ 310 (420)
+.+|||||||+|.++..+++. ..+++|+|+|+.+++.|+++ ..|+.++++|+.++ + + ++++||.|++.
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~-----~~~~~~~~~d~~~~-~--~--~~~~fD~v~~~ 109 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL--GHQIEGLEPATRLVELARQT-----HPSVTFHHGTITDL-S--D--SPKRWAGLLAW 109 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT--TCCEEEECCCHHHHHHHHHH-----CTTSEEECCCGGGG-G--G--SCCCEEEEEEE
T ss_pred CCeEEEecCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHHh-----CCCCeEEeCccccc-c--c--CCCCeEEEEeh
Confidence 578999999999999999998 56999999999999999887 34799999999876 2 2 57899999987
Q ss_pred CCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHH---------------HHHHHHHHHHHcCCceeEe
Q 014711 311 CPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEE---------------VMLRMKQQFLEYGKGKLVL 371 (420)
Q Consensus 311 fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~---------------~~~~~~~~l~~~g~~~~~~ 371 (420)
..-.+..... ...+++++.++|||||.+++.+-... ..+++.+.+++.||....+
T Consensus 110 ~~l~~~~~~~------~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 179 (203)
T 3h2b_A 110 YSLIHMGPGE------LPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSS 179 (203)
T ss_dssp SSSTTCCTTT------HHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEE
T ss_pred hhHhcCCHHH------HHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEE
Confidence 5433322111 14899999999999999998752211 1456777777888766543
No 70
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.49 E-value=1.6e-13 Score=128.13 Aligned_cols=129 Identities=12% Similarity=0.016 Sum_probs=94.2
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
.+.+|||||||+|.++..+++..+ .+++|+|+|+.+++.|++++...+ .|+.++++|+.+++.. + ++++||.|++
T Consensus 60 ~~~~vLDiGcGtG~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~-~--~~~~fD~V~~ 134 (236)
T 1zx0_A 60 KGGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPRQT-HKVIPLKGLWEDVAPT-L--PDGHFDGILY 134 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHHTSCE-EEEEEEECCHHHHHHHHHHGGGCS-SEEEEEESCHHHHGGG-S--CTTCEEEEEE
T ss_pred CCCeEEEEeccCCHHHHHHHhcCC-CeEEEEcCCHHHHHHHHHHHHhcC-CCeEEEecCHHHhhcc-c--CCCceEEEEE
Confidence 467899999999999999977543 489999999999999999987766 6899999999886321 2 5789999988
Q ss_pred -eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHH---------------HHHHHHHHHHcCCce
Q 014711 310 -QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEV---------------MLRMKQQFLEYGKGK 368 (420)
Q Consensus 310 -~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~---------------~~~~~~~l~~~g~~~ 368 (420)
.++... ...|. -....++++++++|||||+|++. +.... .+.....+.+.||..
T Consensus 135 d~~~~~~-~~~~~---~~~~~~l~~~~r~LkpgG~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~ 204 (236)
T 1zx0_A 135 DTYPLSE-ETWHT---HQFNFIKNHAFRLLKPGGVLTYC-NLTSWGELMKSKYSDITIMFEETQVPALLEAGFRR 204 (236)
T ss_dssp CCCCCBG-GGTTT---HHHHHHHHTHHHHEEEEEEEEEC-CHHHHHHHTTTTCSCHHHHHHHHTHHHHHHTTCCG
T ss_pred CCcccch-hhhhh---hhHHHHHHHHHHhcCCCeEEEEE-ecCcHHHhhchhhhhhhhhccHHHHHHHHHCCCCC
Confidence 433211 11111 11236899999999999999874 22211 133455677888863
No 71
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.48 E-value=1.7e-13 Score=127.68 Aligned_cols=124 Identities=13% Similarity=0.105 Sum_probs=96.5
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
++.+|||||||+|.++..+++. ..+++|+|+|+.+++.|+++. ...|+.++++|+.++ +.++++||.|++
T Consensus 53 ~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~---~~~~~~~~~~d~~~~-----~~~~~~fD~v~~ 122 (242)
T 3l8d_A 53 KEAEVLDVGCGDGYGTYKLSRT--GYKAVGVDISEVMIQKGKERG---EGPDLSFIKGDLSSL-----PFENEQFEAIMA 122 (242)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHTTT---CBTTEEEEECBTTBC-----SSCTTCEEEEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHhhc---ccCCceEEEcchhcC-----CCCCCCccEEEE
Confidence 4679999999999999999998 679999999999999998874 346899999999875 225789999998
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcH---------------------HHHHHHHHHHHHcCCce
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIE---------------------EVMLRMKQQFLEYGKGK 368 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~---------------------~~~~~~~~~l~~~g~~~ 368 (420)
...-.+... + ..+++++.++|+|||++++.+... ....++.+.+++.||..
T Consensus 123 ~~~l~~~~~--~------~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 194 (242)
T 3l8d_A 123 INSLEWTEE--P------LRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKV 194 (242)
T ss_dssp ESCTTSSSC--H------HHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEE
T ss_pred cChHhhccC--H------HHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEE
Confidence 754443211 1 378999999999999999975211 01235777888888876
Q ss_pred eEe
Q 014711 369 LVL 371 (420)
Q Consensus 369 ~~~ 371 (420)
+..
T Consensus 195 ~~~ 197 (242)
T 3l8d_A 195 VDG 197 (242)
T ss_dssp EEE
T ss_pred EEe
Confidence 544
No 72
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.48 E-value=3.1e-13 Score=134.29 Aligned_cols=121 Identities=16% Similarity=0.099 Sum_probs=96.3
Q ss_pred CCCEEEEEcCCccHHHHHHHHhC-CCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKR-KDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~-P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
.+..+||+|||+|.+++.+|... |+.+++|+|+++.+++.|++|+...++.+++|.++|+.++.. +..++|.|+
T Consensus 203 ~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~-----~~~~~D~Ii 277 (354)
T 3tma_A 203 PGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPR-----FFPEVDRIL 277 (354)
T ss_dssp TTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGG-----TCCCCSEEE
T ss_pred CCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCcc-----ccCCCCEEE
Confidence 35789999999999999999987 899999999999999999999999998899999999998721 345689999
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHHHH
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVML 355 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~~~ 355 (420)
++-|-.+.........-++..+++.+.+.|||||.+++.|.++.+..
T Consensus 278 ~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~~~~~~ 324 (354)
T 3tma_A 278 ANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLRPALLK 324 (354)
T ss_dssp ECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESCHHHHH
T ss_pred ECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCCHHHHH
Confidence 87332221111111222346899999999999999999998776543
No 73
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.48 E-value=3.3e-14 Score=130.24 Aligned_cols=106 Identities=8% Similarity=-0.006 Sum_probs=80.6
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHh------------CCCcEEEEEcChhhhhhhhh
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLS------------GITNGYFIATNATSTFRSIV 297 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~------------~l~nv~~~~~Da~~~~~~~~ 297 (420)
.+.+|||+|||+|..+..||++ ..+|+|+|+|+.|++.|+++.... ...|++|+++|+.++..
T Consensus 22 ~~~~vLD~GCG~G~~~~~la~~--g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~--- 96 (203)
T 1pjz_A 22 PGARVLVPLCGKSQDMSWLSGQ--GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTA--- 96 (203)
T ss_dssp TTCEEEETTTCCSHHHHHHHHH--CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTH---
T ss_pred CCCEEEEeCCCCcHhHHHHHHC--CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCc---
Confidence 4689999999999999999998 679999999999999999876421 23589999999988621
Q ss_pred ccCC-CeEeEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEe
Q 014711 298 ASYP-GKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 348 (420)
Q Consensus 298 ~~~~-~~~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~t 348 (420)
.+ ++||.|+....-.+.. .. ....++++++++|||||++++.+
T Consensus 97 --~~~~~fD~v~~~~~l~~l~---~~---~~~~~l~~~~r~LkpgG~~~l~~ 140 (203)
T 1pjz_A 97 --RDIGHCAAFYDRAAMIALP---AD---MRERYVQHLEALMPQACSGLLIT 140 (203)
T ss_dssp --HHHHSEEEEEEESCGGGSC---HH---HHHHHHHHHHHHSCSEEEEEEEE
T ss_pred --ccCCCEEEEEECcchhhCC---HH---HHHHHHHHHHHHcCCCcEEEEEE
Confidence 22 6899998753222111 11 12478999999999999855443
No 74
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.48 E-value=2.5e-13 Score=128.29 Aligned_cols=105 Identities=19% Similarity=0.194 Sum_probs=88.0
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCC-CCeEEEEeCChHHHHHHHHHhHHhCCC-cEEEEEcChhhhhhhhhccCCCeEeEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRK-DLNFLGLEVNGKLVTHCRDSLQLSGIT-NGYFIATNATSTFRSIVASYPGKLILV 307 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P-~~~viGiDis~~~i~~A~~~~~~~~l~-nv~~~~~Da~~~~~~~~~~~~~~~d~i 307 (420)
.+.+|||||||+|.++..+|+..| +.+++|+|+|+.+++.|++++.+.++. |++++++|+.+.++... ..++||.|
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~--~~~~fD~V 140 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLG--ECPAFDLI 140 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCC--SCCCCSEE
T ss_pred CCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcC--CCCCeEEE
Confidence 367899999999999999999988 899999999999999999999999987 79999999988654321 23589999
Q ss_pred EEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 308 SIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 308 ~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
++..+.+ -.+.+++.+.+.|||||+|++.
T Consensus 141 ~~d~~~~-----------~~~~~l~~~~~~LkpGG~lv~~ 169 (248)
T 3tfw_A 141 FIDADKP-----------NNPHYLRWALRYSRPGTLIIGD 169 (248)
T ss_dssp EECSCGG-----------GHHHHHHHHHHTCCTTCEEEEE
T ss_pred EECCchH-----------HHHHHHHHHHHhcCCCeEEEEe
Confidence 8853211 1247999999999999999874
No 75
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.48 E-value=1.5e-13 Score=128.50 Aligned_cols=130 Identities=10% Similarity=0.103 Sum_probs=99.5
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
++.+|||||||+|.++..+++.. ..+++|+|+|+.+++.|++++...+..++.++++|+.++. ..+++||.|++
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~-----~~~~~fD~v~~ 152 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFT-----PEPDSYDVIWI 152 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCC-----CCSSCEEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcC-----CCCCCEEEEEE
Confidence 36799999999999999999886 5699999999999999999987765567999999987651 24568999998
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcH--------------HHHHHHHHHHHHcCCceeEe
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIE--------------EVMLRMKQQFLEYGKGKLVL 371 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~--------------~~~~~~~~~l~~~g~~~~~~ 371 (420)
...-.+..+. ....+++++.++|||||++++.+... ...+++.+.+++.||..+..
T Consensus 153 ~~~l~~~~~~------~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 222 (241)
T 2ex4_A 153 QWVIGHLTDQ------HLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAE 222 (241)
T ss_dssp ESCGGGSCHH------HHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEE
T ss_pred cchhhhCCHH------HHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEe
Confidence 7433221110 11379999999999999999854211 02456778888888876544
No 76
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.48 E-value=2.7e-13 Score=128.69 Aligned_cols=122 Identities=16% Similarity=0.286 Sum_probs=101.3
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
.+.+|||+|||+|.+++.+++..+ +++|+|+++.+++.|++++..+++. +++.++|+.+.+ ++++||.|++
T Consensus 120 ~~~~VLDiGcG~G~l~~~la~~g~--~v~gvDi~~~~v~~a~~n~~~~~~~-v~~~~~d~~~~~------~~~~fD~Vv~ 190 (254)
T 2nxc_A 120 PGDKVLDLGTGSGVLAIAAEKLGG--KALGVDIDPMVLPQAEANAKRNGVR-PRFLEGSLEAAL------PFGPFDLLVA 190 (254)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCGGGHHHHHHHHHHTTCC-CEEEESCHHHHG------GGCCEEEEEE
T ss_pred CCCEEEEecCCCcHHHHHHHHhCC--eEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChhhcC------cCCCCCEEEE
Confidence 467999999999999999998755 9999999999999999999988877 999999997742 2568999998
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHHHHHHHHHHHHcCCceeEe
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGKLVL 371 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~~~~~~~~l~~~g~~~~~~ 371 (420)
+.+. + ....++..+.+.|||||++++..-.....+.+.+.++++||....+
T Consensus 191 n~~~------~-----~~~~~l~~~~~~LkpgG~lils~~~~~~~~~v~~~l~~~Gf~~~~~ 241 (254)
T 2nxc_A 191 NLYA------E-----LHAALAPRYREALVPGGRALLTGILKDRAPLVREAMAGAGFRPLEE 241 (254)
T ss_dssp ECCH------H-----HHHHHHHHHHHHEEEEEEEEEEEEEGGGHHHHHHHHHHTTCEEEEE
T ss_pred CCcH------H-----HHHHHHHHHHHHcCCCCEEEEEeeccCCHHHHHHHHHHCCCEEEEE
Confidence 7421 1 1247899999999999999997545556778889999999887554
No 77
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.47 E-value=2.9e-13 Score=119.00 Aligned_cols=107 Identities=14% Similarity=0.125 Sum_probs=84.7
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
.+..|||+|||+|.++..+++..+. ++|+|+|+.+++.|++++...++ |++++++|+.+.++... ....+||.|++
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~~--v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~-~~~~~~D~i~~ 116 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGWE--AVLVEKDPEAVRLLKENVRRTGL-GARVVALPVEVFLPEAK-AQGERFTVAFM 116 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTCE--EEEECCCHHHHHHHHHHHHHHTC-CCEEECSCHHHHHHHHH-HTTCCEEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCCe--EEEEeCCHHHHHHHHHHHHHcCC-ceEEEeccHHHHHHhhh-ccCCceEEEEE
Confidence 3678999999999999999998655 99999999999999999998888 89999999988643221 12347999988
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHH--hhccCCeEEEEEeCc
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVS--DLLVHDGKVFLQSDI 350 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~--~~LkpgG~l~~~td~ 350 (420)
+. |+. .+. +++++.+. ++|+|||.+++.+..
T Consensus 117 ~~--~~~--~~~------~~~~~~~~~~~~L~~gG~~~~~~~~ 149 (171)
T 1ws6_A 117 AP--PYA--MDL------AALFGELLASGLVEAGGLYVLQHPK 149 (171)
T ss_dssp CC--CTT--SCT------THHHHHHHHHTCEEEEEEEEEEEET
T ss_pred CC--CCc--hhH------HHHHHHHHhhcccCCCcEEEEEeCC
Confidence 62 332 111 25566666 999999999998754
No 78
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.47 E-value=3.5e-13 Score=135.25 Aligned_cols=124 Identities=18% Similarity=0.208 Sum_probs=95.2
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCC---cEEEEEcChhhhhhhhhccCCCeEeE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGIT---NGYFIATNATSTFRSIVASYPGKLIL 306 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~---nv~~~~~Da~~~~~~~~~~~~~~~d~ 306 (420)
.+.+|||+|||+|.+++.+++.+|..+|+|+|+|+.+++.|++++..+++. +++|+++|+.+.+ ++++||.
T Consensus 222 ~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~------~~~~fD~ 295 (375)
T 4dcm_A 222 LEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGV------EPFRFNA 295 (375)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTC------CTTCEEE
T ss_pred CCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccC------CCCCeeE
Confidence 347999999999999999999999999999999999999999999998875 6999999998742 4678999
Q ss_pred EEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeC-cHHHHHHHHHHHH
Q 014711 307 VSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSD-IEEVMLRMKQQFL 362 (420)
Q Consensus 307 i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td-~~~~~~~~~~~l~ 362 (420)
|+++ .|++.... ..+....++++.+.+.|||||.+++..+ ...|...+.+.+.
T Consensus 296 Ii~n--ppfh~~~~-~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~~~~~~~l~~~fg 349 (375)
T 4dcm_A 296 VLCN--PPFHQQHA-LTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFG 349 (375)
T ss_dssp EEEC--CCC--------CCHHHHHHHHHHHHEEEEEEEEEEEETTSCHHHHHHHHHS
T ss_pred EEEC--CCcccCcc-cCHHHHHHHHHHHHHhCCCCcEEEEEEECCcCHHHHHHHhcC
Confidence 9987 44432111 1112234789999999999999999753 3445444444444
No 79
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.47 E-value=2.8e-14 Score=139.94 Aligned_cols=213 Identities=16% Similarity=0.188 Sum_probs=130.6
Q ss_pred CcccHHHHHHHhcCCCeEE--Eec---cceEEEcCCCCchHHHHHHHHHhhhcCCCCeeEechhHHH---HHhhcCCC-c
Q 014711 115 GPRSVEEITSTITKCKKVI--WVG---PVKFRFSSQYSNGASKLTGMLCKVSQGTCNVTVIGSMACK---AIAKVSSS-I 185 (420)
Q Consensus 115 Gp~T~~~~~~~~~~~~~i~--wnG---p~G~~e~~~f~~GT~~l~~~~a~~~~~~~~~~i~gg~~~~---~~~~~~~~-~ 185 (420)
||.|++++++.++...+.+ |+. .+|+++.+ .|+|.+.+.-+.........++.+..... ........ .
T Consensus 38 ~~~t~~ela~~~~~~~~~l~r~L~~L~~~g~l~~~---~~~y~~t~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 114 (335)
T 2r3s_A 38 GIESSQSLAQKCQTSERGMRMLCDYLVIIGFMTKQ---AEGYRLTSDSAMFLDRQSKFYVGDAIEFLLSPMITNGFNDLT 114 (335)
T ss_dssp SEECHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEE---TTEEEECHHHHHHTCTTSTTCCGGGHHHHTCHHHHGGGTTHH
T ss_pred CCCCHHHHHHHhCCCchHHHHHHHHHHhcCCeEec---CCEEecCHHHHHHhccCCcHHHHHHHHHhcchhhHHHHHhHH
Confidence 8999999999999876653 444 45888753 46666643321211111222333322211 11111122 3
Q ss_pred ceeeeecCCCee--eeeeccccCCCc-cccccCC-c----cccccccccCC--CCCCEEEEEcCCccHHHHHHHHhCCCC
Q 014711 186 FGLNMVESGSAV--WEFLKGRMLPGV-SALDRAF-P----FDIDWSAAYHD--PAQPLVVDIGSGNGLFLLGMARKRKDL 255 (420)
Q Consensus 186 ~~~st~~GGGa~--le~l~g~~lPgv-~aL~~~~-p----~~~~~~~~f~~--~~~~~vLDIGcG~G~~~~~lA~~~P~~ 255 (420)
+.+++ |...+ ++++.. .|.. +.+...+ . ....+.+.+.. .+..+|||||||+|.++..+++.+|+.
T Consensus 115 ~~l~~--~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~ 190 (335)
T 2r3s_A 115 AAVLK--GGTAISSEGTLSP--EHPVWVQFAKAMSPMMANPAQLIAQLVNENKIEPLKVLDISASHGLFGIAVAQHNPNA 190 (335)
T ss_dssp HHHHH--TSCCSTTTGGGST--TCTHHHHHHHHSGGGGHHHHHHHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHCTTC
T ss_pred HHHhc--CCCCCCCcccccC--CHHHHHHHHHHHHHHHhhhHHHHHHhcccccCCCCEEEEECCCcCHHHHHHHHHCCCC
Confidence 66677 44433 222211 1111 1111111 0 00012222221 246899999999999999999999999
Q ss_pred eEEEEeCChHHHHHHHHHhHHhCCC-cEEEEEcChhhhhhhhhccCCCeEeEEEEeCCCCCCCCcchhhhhhHHHHHHHH
Q 014711 256 NFLGLEVNGKLVTHCRDSLQLSGIT-NGYFIATNATSTFRSIVASYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAV 334 (420)
Q Consensus 256 ~viGiDis~~~i~~A~~~~~~~~l~-nv~~~~~Da~~~~~~~~~~~~~~~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i 334 (420)
+++|+|++ .+++.|++++...++. +++|+++|+.+. + .+..+|.|++...-.++.. . ....+++.+
T Consensus 191 ~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~-----~~~~~D~v~~~~~l~~~~~--~----~~~~~l~~~ 257 (335)
T 2r3s_A 191 EIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEV-D-----YGNDYDLVLLPNFLHHFDV--A----TCEQLLRKI 257 (335)
T ss_dssp EEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTS-C-----CCSCEEEEEEESCGGGSCH--H----HHHHHHHHH
T ss_pred eEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccC-C-----CCCCCcEEEEcchhccCCH--H----HHHHHHHHH
Confidence 99999999 9999999999888876 599999999764 1 1334999988632211100 0 124899999
Q ss_pred HhhccCCeEEEEE
Q 014711 335 SDLLVHDGKVFLQ 347 (420)
Q Consensus 335 ~~~LkpgG~l~~~ 347 (420)
.+.|+|||++++.
T Consensus 258 ~~~L~pgG~l~i~ 270 (335)
T 2r3s_A 258 KTALAVEGKVIVF 270 (335)
T ss_dssp HHHEEEEEEEEEE
T ss_pred HHhCCCCcEEEEE
Confidence 9999999988875
No 80
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.47 E-value=1.9e-13 Score=128.87 Aligned_cols=128 Identities=14% Similarity=0.139 Sum_probs=98.2
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
++.+|||||||+|.++..+++.+ ..+++|+|+|+.+++.|++++... .|++++++|+.++ +.++++||.|++
T Consensus 55 ~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~~~-----~~~~~~fD~v~~ 126 (266)
T 3ujc_A 55 ENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSGN--NKIIFEANDILTK-----EFPENNFDLIYS 126 (266)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCSC--TTEEEEECCTTTC-----CCCTTCEEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhcC--CCeEEEECccccC-----CCCCCcEEEEeH
Confidence 46799999999999999999987 689999999999999999887554 6899999999875 225789999998
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeC---c-----HH-------------HHHHHHHHHHHcCCce
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSD---I-----EE-------------VMLRMKQQFLEYGKGK 368 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td---~-----~~-------------~~~~~~~~l~~~g~~~ 368 (420)
...-.+.... ....+++++.++|||||.+++.+- . .. ..+++.+.+++.||..
T Consensus 127 ~~~l~~~~~~------~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 200 (266)
T 3ujc_A 127 RDAILALSLE------NKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEFKEYVKQRKYTLITVEEYADILTACNFKN 200 (266)
T ss_dssp ESCGGGSCHH------HHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHHHHHHHHHTCCCCCHHHHHHHHHHTTCEE
T ss_pred HHHHHhcChH------HHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHHHHHHHhcCCCCCCCHHHHHHHHHHcCCeE
Confidence 7433221101 124899999999999999998741 1 00 1345677788888876
Q ss_pred eEe
Q 014711 369 LVL 371 (420)
Q Consensus 369 ~~~ 371 (420)
+.+
T Consensus 201 ~~~ 203 (266)
T 3ujc_A 201 VVS 203 (266)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 81
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.47 E-value=2.3e-13 Score=136.85 Aligned_cols=134 Identities=13% Similarity=0.178 Sum_probs=102.7
Q ss_pred CCCEEEEEcCCccHHHHHHHHhC-CCCeEEEEeCChHHHHHHHHHhHHh-----C-C--CcEEEEEcChhhhhhh-hhcc
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKR-KDLNFLGLEVNGKLVTHCRDSLQLS-----G-I--TNGYFIATNATSTFRS-IVAS 299 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~-P~~~viGiDis~~~i~~A~~~~~~~-----~-l--~nv~~~~~Da~~~~~~-~~~~ 299 (420)
++.+|||||||+|.++..+++.+ |..+|+|+|+|+.+++.|++++... | . .|++|+++|+.++... ..+.
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~ 162 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGV 162 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCC
T ss_pred CCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCC
Confidence 46899999999999999999986 8899999999999999999988654 3 2 5899999999876211 0022
Q ss_pred CCCeEeEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcH----------------------HHHHHH
Q 014711 300 YPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIE----------------------EVMLRM 357 (420)
Q Consensus 300 ~~~~~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~----------------------~~~~~~ 357 (420)
++++||.|+++..-.+..+ + ..+++++.++|||||+|++..-.. ...+++
T Consensus 163 ~~~~fD~V~~~~~l~~~~d--~------~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (383)
T 4fsd_A 163 PDSSVDIVISNCVCNLSTN--K------LALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDF 234 (383)
T ss_dssp CTTCEEEEEEESCGGGCSC--H------HHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHH
T ss_pred CCCCEEEEEEccchhcCCC--H------HHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHH
Confidence 5789999998864433222 1 389999999999999999863110 112567
Q ss_pred HHHHHHcCCceeEe
Q 014711 358 KQQFLEYGKGKLVL 371 (420)
Q Consensus 358 ~~~l~~~g~~~~~~ 371 (420)
.+.+++.||..+.+
T Consensus 235 ~~ll~~aGF~~v~~ 248 (383)
T 4fsd_A 235 RRLVAEAGFRDVRL 248 (383)
T ss_dssp HHHHHHTTCCCEEE
T ss_pred HHHHHHCCCceEEE
Confidence 88889999876544
No 82
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.47 E-value=2.9e-13 Score=128.54 Aligned_cols=127 Identities=14% Similarity=0.095 Sum_probs=101.5
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCC-cEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGIT-NGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~-nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
++.+|||||||+|.++..+++. |..+++|+|+|+.+++.|++++...+++ |++++++|+.++ +.++++||.|+
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-----~~~~~~fD~i~ 119 (267)
T 3kkz_A 46 EKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDL-----PFRNEELDLIW 119 (267)
T ss_dssp TTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC-----CCCTTCEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhC-----CCCCCCEEEEE
Confidence 4689999999999999999998 8889999999999999999999988885 599999999775 22478999999
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCc-------HH-------------HHHHHHHHHHHcCCce
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI-------EE-------------VMLRMKQQFLEYGKGK 368 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~-------~~-------------~~~~~~~~l~~~g~~~ 368 (420)
+..+-.+. . ...+++.+.++|||||++++.+-. .. ....+.+.+++.||..
T Consensus 120 ~~~~~~~~-~--------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~ 190 (267)
T 3kkz_A 120 SEGAIYNI-G--------FERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWMDAYPEIDTIPNQVAKIHKAGYLP 190 (267)
T ss_dssp ESSCGGGT-C--------HHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCEEHHHHHHHHHHTTEEE
T ss_pred EcCCceec-C--------HHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEE
Confidence 87433322 1 147999999999999999986411 01 1235677888999876
Q ss_pred eEe
Q 014711 369 LVL 371 (420)
Q Consensus 369 ~~~ 371 (420)
+.+
T Consensus 191 v~~ 193 (267)
T 3kkz_A 191 VAT 193 (267)
T ss_dssp EEE
T ss_pred EEE
Confidence 544
No 83
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.47 E-value=3.6e-13 Score=131.25 Aligned_cols=127 Identities=12% Similarity=0.035 Sum_probs=101.7
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCC-cEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGIT-NGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~-nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
.+.+|||||||+|.++..+++++ ..+++|+|+|+.+++.|++++...++. |+.|+++|+.++ +.++++||.|+
T Consensus 117 ~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-----~~~~~~fD~V~ 190 (312)
T 3vc1_A 117 PDDTLVDAGCGRGGSMVMAHRRF-GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDT-----PFDKGAVTASW 190 (312)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC-----CCCTTCEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcC-----CCCCCCEeEEE
Confidence 46899999999999999999986 679999999999999999999998886 799999999875 22468999999
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCc--H--------------H------HHHHHHHHHHHcCC
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI--E--------------E------VMLRMKQQFLEYGK 366 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~--~--------------~------~~~~~~~~l~~~g~ 366 (420)
+...-.+.. ...+++++.++|||||++++.+.. . . -.+++.+.+++.||
T Consensus 191 ~~~~l~~~~---------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf 261 (312)
T 3vc1_A 191 NNESTMYVD---------LHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHFECNIHSRREYLRAMADNRL 261 (312)
T ss_dssp EESCGGGSC---------HHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHHTCCCCBHHHHHHHHHTTTE
T ss_pred ECCchhhCC---------HHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhhhcCCCCCHHHHHHHHHHCCC
Confidence 874433321 248999999999999999987511 0 0 12456778888898
Q ss_pred ceeEe
Q 014711 367 GKLVL 371 (420)
Q Consensus 367 ~~~~~ 371 (420)
..+.+
T Consensus 262 ~~~~~ 266 (312)
T 3vc1_A 262 VPHTI 266 (312)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 76544
No 84
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.46 E-value=1.8e-13 Score=128.17 Aligned_cols=103 Identities=23% Similarity=0.343 Sum_probs=87.1
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
++.+|||||||+|.++..+++..+ +++|+|+|+.+++.|++++...+++|+.++++|+.++ +.++++||.|++
T Consensus 21 ~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~-----~~~~~~fD~v~~ 93 (239)
T 1xxl_A 21 AEHRVLDIGAGAGHTALAFSPYVQ--ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESL-----PFPDDSFDIITC 93 (239)
T ss_dssp TTCEEEEESCTTSHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBC-----CSCTTCEEEEEE
T ss_pred CCCEEEEEccCcCHHHHHHHHhCC--EEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccC-----CCCCCcEEEEEE
Confidence 468999999999999999999864 8999999999999999999999988999999999775 225689999998
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
.+.-.+..+ ...+++++.++|||||++++.
T Consensus 94 ~~~l~~~~~--------~~~~l~~~~~~LkpgG~l~~~ 123 (239)
T 1xxl_A 94 RYAAHHFSD--------VRKAVREVARVLKQDGRFLLV 123 (239)
T ss_dssp ESCGGGCSC--------HHHHHHHHHHHEEEEEEEEEE
T ss_pred CCchhhccC--------HHHHHHHHHHHcCCCcEEEEE
Confidence 743332211 137999999999999999985
No 85
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.46 E-value=4.9e-13 Score=120.46 Aligned_cols=105 Identities=10% Similarity=0.091 Sum_probs=86.8
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
++.+|||+|||+|.++..+++. ..+++|+|+|+.+++.|++++...+++|+.++++|+.++ + .+++||.|++
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~-----~-~~~~~D~v~~ 103 (199)
T 2xvm_A 32 KPGKTLDLGCGNGRNSLYLAAN--GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNL-----T-FDRQYDFILS 103 (199)
T ss_dssp CSCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGC-----C-CCCCEEEEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhC-----C-CCCCceEEEE
Confidence 3579999999999999999988 679999999999999999999888888999999999875 2 2678999998
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEe
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 348 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~t 348 (420)
..+-.+.... ....+++.+.++|||||.+++.+
T Consensus 104 ~~~l~~~~~~------~~~~~l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 104 TVVLMFLEAK------TIPGLIANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp ESCGGGSCGG------GHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cchhhhCCHH------HHHHHHHHHHHhcCCCeEEEEEE
Confidence 7543332111 12479999999999999987754
No 86
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.46 E-value=1.8e-13 Score=133.01 Aligned_cols=108 Identities=10% Similarity=-0.003 Sum_probs=87.5
Q ss_pred CCCEEEEEcCCccHHHHHHH-HhCCCCeEEEEeCChHHHHHHHHHhHHhCCCc-EEEEEcChhhhhhhhhccCCCeEeEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMA-RKRKDLNFLGLEVNGKLVTHCRDSLQLSGITN-GYFIATNATSTFRSIVASYPGKLILV 307 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA-~~~P~~~viGiDis~~~i~~A~~~~~~~~l~n-v~~~~~Da~~~~~~~~~~~~~~~d~i 307 (420)
++.+|||||||+|.++..+| ..+|+.+++|+|+|+.+++.|++++...++.+ ++++++|+.++ + .+++||.|
T Consensus 118 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-----~-~~~~fD~v 191 (305)
T 3ocj_A 118 PGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKL-----D-TREGYDLL 191 (305)
T ss_dssp TTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGC-----C-CCSCEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcC-----C-ccCCeEEE
Confidence 46889999999999999997 56899999999999999999999998888765 99999999876 2 24899999
Q ss_pred EEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEe
Q 014711 308 SIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 348 (420)
Q Consensus 308 ~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~t 348 (420)
+++.+-.+.... .....+++++.++|||||+|++.+
T Consensus 192 ~~~~~~~~~~~~-----~~~~~~l~~~~~~LkpgG~l~i~~ 227 (305)
T 3ocj_A 192 TSNGLNIYEPDD-----ARVTELYRRFWQALKPGGALVTSF 227 (305)
T ss_dssp ECCSSGGGCCCH-----HHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EECChhhhcCCH-----HHHHHHHHHHHHhcCCCeEEEEEe
Confidence 886422221111 112368999999999999999864
No 87
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.46 E-value=5.4e-13 Score=129.61 Aligned_cols=128 Identities=16% Similarity=0.207 Sum_probs=96.7
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHH--hC--CCcEEEEEcChhhhhhhhhccCCCeEe
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQL--SG--ITNGYFIATNATSTFRSIVASYPGKLI 305 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~--~~--l~nv~~~~~Da~~~~~~~~~~~~~~~d 305 (420)
++.+|||||||+|.++..+++..|..+++++|+++.+++.|++++.. .+ .++++++++|+.+.++. .+++||
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~----~~~~fD 165 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRK----FKNEFD 165 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGG----CSSCEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhh----CCCCce
Confidence 45799999999999999999987889999999999999999998754 22 36899999999876432 357899
Q ss_pred EEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCc----HHHHHHHHHHHHHc
Q 014711 306 LVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI----EEVMLRMKQQFLEY 364 (420)
Q Consensus 306 ~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~----~~~~~~~~~~l~~~ 364 (420)
.|++..++||.. +...+...++++.+.+.|+|||.|++.+.. ......+.+.+.+.
T Consensus 166 ~Ii~d~~~~~~~---~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~ 225 (296)
T 1inl_A 166 VIIIDSTDPTAG---QGGHLFTEEFYQACYDALKEDGVFSAETEDPFYDIGWFKLAYRRISKV 225 (296)
T ss_dssp EEEEEC-------------CCSHHHHHHHHHHEEEEEEEEEECCCTTTTHHHHHHHHHHHHHH
T ss_pred EEEEcCCCcccC---chhhhhHHHHHHHHHHhcCCCcEEEEEccCcccCHHHHHHHHHHHHHH
Confidence 999988887532 122344568999999999999999998654 33345566666665
No 88
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.46 E-value=4.6e-13 Score=132.34 Aligned_cols=114 Identities=17% Similarity=0.190 Sum_probs=93.8
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHh--CC--CcEEEEEcChhhhhhhhhccCCCeEe
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLS--GI--TNGYFIATNATSTFRSIVASYPGKLI 305 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~--~l--~nv~~~~~Da~~~~~~~~~~~~~~~d 305 (420)
++.+|||||||+|.++..+++..|..+++++|+|+.+++.|++++... ++ ++++++++|+.++++.. .+++||
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~---~~~~fD 196 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNA---AEGSYD 196 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTS---CTTCEE
T ss_pred CCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhc---cCCCcc
Confidence 467999999999999999999888899999999999999999998653 33 57999999998864321 357899
Q ss_pred EEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCc
Q 014711 306 LVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI 350 (420)
Q Consensus 306 ~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~ 350 (420)
.|++..++|+. +...+...++++.+.++|+|||.|++.++.
T Consensus 197 lIi~d~~~p~~----~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 237 (334)
T 1xj5_A 197 AVIVDSSDPIG----PAKELFEKPFFQSVARALRPGGVVCTQAES 237 (334)
T ss_dssp EEEECCCCTTS----GGGGGGSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred EEEECCCCccC----cchhhhHHHHHHHHHHhcCCCcEEEEecCC
Confidence 99998777763 222244579999999999999999997543
No 89
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.46 E-value=6.9e-13 Score=130.38 Aligned_cols=127 Identities=11% Similarity=0.120 Sum_probs=100.7
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHH--hC--CCcEEEEEcChhhhhhhhhccCCCeEe
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQL--SG--ITNGYFIATNATSTFRSIVASYPGKLI 305 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~--~~--l~nv~~~~~Da~~~~~~~~~~~~~~~d 305 (420)
++.+|||||||+|.++..+++..|..+++++|+|+.+++.|++++.. .+ .++++++++|+.+.++. .+++||
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~----~~~~fD 191 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLEN----VTNTYD 191 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHH----CCSCEE
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhh----cCCCce
Confidence 46799999999999999999887889999999999999999999765 22 35799999999886432 367899
Q ss_pred EEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcH----HHHHHHHHHHHHc
Q 014711 306 LVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIE----EVMLRMKQQFLEY 364 (420)
Q Consensus 306 ~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~----~~~~~~~~~l~~~ 364 (420)
.|+++.++|+. +...+...++++.+.+.|+|||.+++.+... .....+.+.+++.
T Consensus 192 vIi~d~~~p~~----~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~ 250 (321)
T 2pt6_A 192 VIIVDSSDPIG----PAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKL 250 (321)
T ss_dssp EEEEECCCSSS----GGGGGSSHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHTT
T ss_pred EEEECCcCCCC----cchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHH
Confidence 99998888762 2234445699999999999999999986432 3344556666654
No 90
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.46 E-value=2.1e-13 Score=131.80 Aligned_cols=123 Identities=15% Similarity=0.192 Sum_probs=96.5
Q ss_pred CCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCc-EEEEEcChhhhhhhhhccCCCeE---eE
Q 014711 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITN-GYFIATNATSTFRSIVASYPGKL---IL 306 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~n-v~~~~~Da~~~~~~~~~~~~~~~---d~ 306 (420)
+.+|||+|||+|.+++.+++. |+.+++|+|+|+.+++.|++++..++++| ++|+++|+.+.+ +++| |.
T Consensus 124 ~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~-------~~~f~~~D~ 195 (284)
T 1nv8_A 124 IKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPF-------KEKFASIEM 195 (284)
T ss_dssp CCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGG-------GGGTTTCCE
T ss_pred CCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhc-------ccccCCCCE
Confidence 568999999999999999999 99999999999999999999999999886 999999998753 2467 99
Q ss_pred EEEeCCCCCCCCc---------chhhhhh----HHHHHHHHH-hhccCCeEEEEEeCcHHHHHHHHHHHHHc
Q 014711 307 VSIQCPNPDFNRP---------EHRWRMV----QRSLVEAVS-DLLVHDGKVFLQSDIEEVMLRMKQQFLEY 364 (420)
Q Consensus 307 i~~~fpdp~~k~~---------~~k~Rl~----~~~~l~~i~-~~LkpgG~l~~~td~~~~~~~~~~~l~~~ 364 (420)
|+++ .|+.... .+...+. ...+++.+. +.|+|||.+++.++. .+.+.+.+.+.++
T Consensus 196 Ivsn--PPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~-~q~~~v~~~~~~~ 264 (284)
T 1nv8_A 196 ILSN--PPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGE-DQVEELKKIVSDT 264 (284)
T ss_dssp EEEC--CCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCT-TCHHHHTTTSTTC
T ss_pred EEEc--CCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECc-hHHHHHHHHHHhC
Confidence 9987 4443211 1111111 026899999 999999999998865 4456666666554
No 91
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.46 E-value=2.6e-13 Score=126.21 Aligned_cols=100 Identities=15% Similarity=0.256 Sum_probs=81.7
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
++.+|||||||+|.++..+++..+ +++|+|+|+.+++.|+++... |+.++++|+.++ + ++++||.|++
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~----~v~~~~~d~~~~----~--~~~~fD~v~~ 109 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQEHFN--DITCVEASEEAISHAQGRLKD----GITYIHSRFEDA----Q--LPRRYDNIVL 109 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHTTTCS--CEEEEESCHHHHHHHHHHSCS----CEEEEESCGGGC----C--CSSCEEEEEE
T ss_pred CCCcEEEECCCCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhhhC----CeEEEEccHHHc----C--cCCcccEEEE
Confidence 356799999999999999999865 799999999999999988643 899999999875 1 4788999998
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHH-hhccCCeEEEEEeC
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVS-DLLVHDGKVFLQSD 349 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~-~~LkpgG~l~~~td 349 (420)
...-.+..+ + ..+++++. ++|||||++++.+.
T Consensus 110 ~~~l~~~~~--~------~~~l~~~~~~~LkpgG~l~i~~~ 142 (250)
T 2p7i_A 110 THVLEHIDD--P------VALLKRINDDWLAEGGRLFLVCP 142 (250)
T ss_dssp ESCGGGCSS--H------HHHHHHHHHTTEEEEEEEEEEEE
T ss_pred hhHHHhhcC--H------HHHHHHHHHHhcCCCCEEEEEcC
Confidence 743222111 1 37999999 99999999999763
No 92
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.45 E-value=2.7e-13 Score=131.72 Aligned_cols=127 Identities=16% Similarity=0.248 Sum_probs=94.9
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHh-----CCCcEEEEEcChhhhhhhhhccCCCeE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLS-----GITNGYFIATNATSTFRSIVASYPGKL 304 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~-----~l~nv~~~~~Da~~~~~~~~~~~~~~~ 304 (420)
++.+|||||||+|..+..+++..|..+++++|+++.+++.|++++... .-++++++++|+.+.+.. .+++|
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~----~~~~f 158 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQ----TSQTF 158 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---C----CCCCE
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhh----cCCCc
Confidence 568999999999999999999878889999999999999999998654 235799999999877431 36789
Q ss_pred eEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCc----HHHHHHHHHHHHHc
Q 014711 305 ILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI----EEVMLRMKQQFLEY 364 (420)
Q Consensus 305 d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~----~~~~~~~~~~l~~~ 364 (420)
|.|++..++|+.. ...+...+|++.+.++|+|||.|++.+.. .+....+.+.+++.
T Consensus 159 DvIi~D~~~p~~~----~~~l~~~~f~~~~~~~LkpgG~lv~~~~s~~~~~~~~~~~~~~l~~~ 218 (294)
T 3adn_A 159 DVIISDCTDPIGP----GESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHY 218 (294)
T ss_dssp EEEEECC--------------CCHHHHHHHHHTEEEEEEEEEEEEECSSCCHHHHHHHHHHHHH
T ss_pred cEEEECCCCccCc----chhccHHHHHHHHHHhcCCCCEEEEecCCcccchHHHHHHHHHHHHH
Confidence 9999988888622 22355578999999999999999998632 23455566666654
No 93
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.45 E-value=6e-13 Score=122.88 Aligned_cols=106 Identities=18% Similarity=0.227 Sum_probs=87.1
Q ss_pred CCEEEEEcCCccHHHHHHHHhCC-CCeEEEEeCChHHHHHHHHHhHHhCCCc-EEEEEcChhhhhhhhhcc-CCCeEeEE
Q 014711 231 QPLVVDIGSGNGLFLLGMARKRK-DLNFLGLEVNGKLVTHCRDSLQLSGITN-GYFIATNATSTFRSIVAS-YPGKLILV 307 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~~P-~~~viGiDis~~~i~~A~~~~~~~~l~n-v~~~~~Da~~~~~~~~~~-~~~~~d~i 307 (420)
+.+|||||||+|.++..+|+..| +.+++|+|+++.+++.|++++...++.+ ++++++|+.+.++..... ..++||.|
T Consensus 65 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~v 144 (225)
T 3tr6_A 65 AKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDLI 144 (225)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEEE
T ss_pred CCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccEE
Confidence 57899999999999999999987 8999999999999999999999999875 999999998775432200 01789999
Q ss_pred EEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 308 SIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 308 ~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
++.. + . -....+++.+.+.|||||+|++.
T Consensus 145 ~~~~---~--~------~~~~~~l~~~~~~L~pgG~lv~~ 173 (225)
T 3tr6_A 145 YIDA---D--K------ANTDLYYEESLKLLREGGLIAVD 173 (225)
T ss_dssp EECS---C--G------GGHHHHHHHHHHHEEEEEEEEEE
T ss_pred EECC---C--H------HHHHHHHHHHHHhcCCCcEEEEe
Confidence 8753 2 0 11247899999999999999884
No 94
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.45 E-value=4.9e-13 Score=124.71 Aligned_cols=123 Identities=12% Similarity=0.140 Sum_probs=101.0
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCc-EEEEEcChhhhhhhhhccCCC-eEeEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITN-GYFIATNATSTFRSIVASYPG-KLILV 307 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~n-v~~~~~Da~~~~~~~~~~~~~-~~d~i 307 (420)
++.+|+|||||+|.+++.+|+..|..+++|+|+++.+++.|++|+..+++.| +++.++|+.+.+ +++ .||.|
T Consensus 15 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l------~~~~~~D~I 88 (225)
T 3kr9_A 15 QGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAF------EETDQVSVI 88 (225)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGC------CGGGCCCEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhc------ccCcCCCEE
Confidence 4678999999999999999999999999999999999999999999999974 999999997643 223 69998
Q ss_pred EEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHHHHHHHHHHHHcCCceeE
Q 014711 308 SIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGKLV 370 (420)
Q Consensus 308 ~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~~~~~~~~l~~~g~~~~~ 370 (420)
++.-. ...+ -.+++....+.|+|+|+|+++... -...+++.+.++||....
T Consensus 89 viaG~---------Gg~~-i~~Il~~~~~~L~~~~~lVlq~~~--~~~~vr~~L~~~Gf~i~~ 139 (225)
T 3kr9_A 89 TIAGM---------GGRL-IARILEEGLGKLANVERLILQPNN--REDDLRIWLQDHGFQIVA 139 (225)
T ss_dssp EEEEE---------CHHH-HHHHHHHTGGGCTTCCEEEEEESS--CHHHHHHHHHHTTEEEEE
T ss_pred EEcCC---------ChHH-HHHHHHHHHHHhCCCCEEEEECCC--CHHHHHHHHHHCCCEEEE
Confidence 76411 1112 248899999999999999998643 355788899999987654
No 95
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.45 E-value=3.3e-13 Score=129.45 Aligned_cols=117 Identities=15% Similarity=0.201 Sum_probs=95.5
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
++.+|||+|||+|.+++.+|+..+..+|+|+|+|+.+++.|++++..++++|+.++++|+.+. + ...++|.|++
T Consensus 119 ~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~-~-----~~~~~D~Vi~ 192 (272)
T 3a27_A 119 ENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDV-E-----LKDVADRVIM 192 (272)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGC-C-----CTTCEEEEEE
T ss_pred CCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHc-C-----ccCCceEEEE
Confidence 467999999999999999999988889999999999999999999999999999999999875 2 2568999988
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcH-----HHHHHHHHHHHHc
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIE-----EVMLRMKQQFLEY 364 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~-----~~~~~~~~~l~~~ 364 (420)
+.|. . ..+++..+.+.|+|||.+++.+... .......+.+.+.
T Consensus 193 d~p~----~--------~~~~l~~~~~~LkpgG~l~~s~~~~~~~~~~~~~~~~~~~~~~ 240 (272)
T 3a27_A 193 GYVH----K--------THKFLDKTFEFLKDRGVIHYHETVAEKIMYERPIERLKFYAEK 240 (272)
T ss_dssp CCCS----S--------GGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTHHHHHHHHHHHH
T ss_pred CCcc----c--------HHHHHHHHHHHcCCCCEEEEEEcCccccccccHHHHHHHHHHH
Confidence 7442 1 1268889999999999999875332 3444555656554
No 96
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.45 E-value=6.7e-13 Score=128.54 Aligned_cols=106 Identities=12% Similarity=0.106 Sum_probs=87.7
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCC-cEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGIT-NGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~-nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
++.+|||||||+|.++..+++.++ .+++|+|+|+.+++.|++++...++. |++++++|+.++ +++||.|+
T Consensus 72 ~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--------~~~fD~v~ 142 (302)
T 3hem_A 72 PGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF--------DEPVDRIV 142 (302)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC--------CCCCSEEE
T ss_pred CcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc--------CCCccEEE
Confidence 467999999999999999999987 89999999999999999999988887 899999999764 57899998
Q ss_pred EeC-----CCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEe
Q 014711 309 IQC-----PNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 348 (420)
Q Consensus 309 ~~f-----pdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~t 348 (420)
+.. |||+..... -..+.+++++.++|||||++++.+
T Consensus 143 ~~~~~~~~~d~~~~~~~----~~~~~~l~~~~~~LkpgG~l~i~~ 183 (302)
T 3hem_A 143 SLGAFEHFADGAGDAGF----ERYDTFFKKFYNLTPDDGRMLLHT 183 (302)
T ss_dssp EESCGGGTTCCSSCCCT----THHHHHHHHHHHSSCTTCEEEEEE
T ss_pred EcchHHhcCccccccch----hHHHHHHHHHHHhcCCCcEEEEEE
Confidence 863 444311000 012489999999999999999875
No 97
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.45 E-value=4.1e-13 Score=129.07 Aligned_cols=104 Identities=15% Similarity=0.246 Sum_probs=86.7
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCC-CeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKD-LNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~-~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
++.+|||||||+|.++..+++.+|. .+++|+|+|+.+++.|++++...+. |++|+++|+.++ + .+++||.|+
T Consensus 22 ~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~-----~-~~~~fD~v~ 94 (284)
T 3gu3_A 22 KPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY-DSEFLEGDATEI-----E-LNDKYDIAI 94 (284)
T ss_dssp SCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS-EEEEEESCTTTC-----C-CSSCEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEEcchhhc-----C-cCCCeeEEE
Confidence 4689999999999999999999985 8999999999999999999876665 899999999875 2 256899999
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEe
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 348 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~t 348 (420)
+...-.+..+ .+.+++++.++|||||++++..
T Consensus 95 ~~~~l~~~~~--------~~~~l~~~~~~LkpgG~l~~~~ 126 (284)
T 3gu3_A 95 CHAFLLHMTT--------PETMLQKMIHSVKKGGKIICFE 126 (284)
T ss_dssp EESCGGGCSS--------HHHHHHHHHHTEEEEEEEEEEE
T ss_pred ECChhhcCCC--------HHHHHHHHHHHcCCCCEEEEEe
Confidence 8753222211 1389999999999999999764
No 98
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.44 E-value=3.7e-13 Score=123.04 Aligned_cols=107 Identities=11% Similarity=0.139 Sum_probs=85.1
Q ss_pred CCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCC--CcEEEEEcChhhhhhhhhccCCCe-EeEE
Q 014711 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGI--TNGYFIATNATSTFRSIVASYPGK-LILV 307 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l--~nv~~~~~Da~~~~~~~~~~~~~~-~d~i 307 (420)
+.+|||+|||+|.+++.++++. ..+|+|+|+|+.+++.|++++...++ .|+.++++|+.++++. + .+++ ||.|
T Consensus 54 ~~~vLDlGcGtG~~~~~~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~-~--~~~~~fD~I 129 (201)
T 2ift_A 54 QSECLDGFAGSGSLGFEALSRQ-AKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQ-P--QNQPHFDVV 129 (201)
T ss_dssp TCEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTS-C--CSSCCEEEE
T ss_pred CCeEEEcCCccCHHHHHHHHcc-CCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHh-h--ccCCCCCEE
Confidence 5789999999999999977764 36899999999999999999999998 6999999999876321 1 2568 9999
Q ss_pred EEeCCCCCCCCcchhhhhhHHHHHHHH--HhhccCCeEEEEEeCc
Q 014711 308 SIQCPNPDFNRPEHRWRMVQRSLVEAV--SDLLVHDGKVFLQSDI 350 (420)
Q Consensus 308 ~~~fpdp~~k~~~~k~Rl~~~~~l~~i--~~~LkpgG~l~~~td~ 350 (420)
+++.| +. .. ..+.+++.+ .++|+|||.+++.+..
T Consensus 130 ~~~~~--~~-~~------~~~~~l~~~~~~~~LkpgG~l~i~~~~ 165 (201)
T 2ift_A 130 FLDPP--FH-FN------LAEQAISLLCENNWLKPNALIYVETEK 165 (201)
T ss_dssp EECCC--SS-SC------HHHHHHHHHHHTTCEEEEEEEEEEEES
T ss_pred EECCC--CC-Cc------cHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 88633 32 11 123677777 6689999999998754
No 99
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.44 E-value=3.9e-13 Score=127.69 Aligned_cols=107 Identities=13% Similarity=0.029 Sum_probs=81.3
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHH-----------------hCCCcEEEEEcChhhh
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQL-----------------SGITNGYFIATNATST 292 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~-----------------~~l~nv~~~~~Da~~~ 292 (420)
.+.+|||+|||+|..+..||++ ..+|+|+|+|+.|++.|+++... ....|++|+++|+.++
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~--G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l 145 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADR--GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDL 145 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHT--TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTG
T ss_pred CCCeEEEeCCCCcHHHHHHHHC--CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccC
Confidence 4679999999999999999988 67999999999999999877531 1235899999999886
Q ss_pred hhhhhccCCCeEeEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEe
Q 014711 293 FRSIVASYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 348 (420)
Q Consensus 293 ~~~~~~~~~~~~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~t 348 (420)
.. . ..++||.|+....-.+.. .. ....+++++.++|||||+|++.+
T Consensus 146 ~~---~-~~~~FD~V~~~~~l~~l~---~~---~~~~~l~~~~~~LkpGG~l~l~~ 191 (252)
T 2gb4_A 146 PR---A-NIGKFDRIWDRGALVAIN---PG---DHDRYADIILSLLRKEFQYLVAV 191 (252)
T ss_dssp GG---G-CCCCEEEEEESSSTTTSC---GG---GHHHHHHHHHHTEEEEEEEEEEE
T ss_pred Cc---c-cCCCEEEEEEhhhhhhCC---HH---HHHHHHHHHHHHcCCCeEEEEEE
Confidence 21 0 137899998653222211 11 12479999999999999997654
No 100
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.44 E-value=6.1e-13 Score=128.65 Aligned_cols=103 Identities=17% Similarity=0.203 Sum_probs=87.8
Q ss_pred CCCEEEEEcCCccHHHHHHHHhC-CCCeEEEEeCChHHHHHHHHHhHHh--CCCcEEEEEcChhhhhhhhhccCC-----
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKR-KDLNFLGLEVNGKLVTHCRDSLQLS--GITNGYFIATNATSTFRSIVASYP----- 301 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~-P~~~viGiDis~~~i~~A~~~~~~~--~l~nv~~~~~Da~~~~~~~~~~~~----- 301 (420)
++.+|||||||+|.++..+++.+ |..+++|+|+|+.+++.|++++... ...|++|+++|+.++. + .+
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~---~--~~~~~~~ 110 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFK---F--LGADSVD 110 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCG---G--GCTTTTT
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCC---c--ccccccc
Confidence 47899999999999999999986 8999999999999999999998875 3568999999998762 1 23
Q ss_pred -CeEeEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEE
Q 014711 302 -GKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFL 346 (420)
Q Consensus 302 -~~~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~ 346 (420)
++||.|++...-.|. + ...+++++.++|||||.|++
T Consensus 111 ~~~fD~V~~~~~l~~~---~------~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 111 KQKIDMITAVECAHWF---D------FEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp SSCEEEEEEESCGGGS---C------HHHHHHHHHHHEEEEEEEEE
T ss_pred CCCeeEEeHhhHHHHh---C------HHHHHHHHHHhcCCCcEEEE
Confidence 799999998654443 1 14899999999999999988
No 101
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.44 E-value=5.3e-13 Score=119.16 Aligned_cols=110 Identities=15% Similarity=0.136 Sum_probs=86.2
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCC-CcEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGI-TNGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l-~nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
.+..|||+|||+|.++..+++ .+..+++|+|+|+.+++.|++++...++ .|++++++|+.+.++.. +..+++||.|+
T Consensus 44 ~~~~vLD~GcG~G~~~~~~~~-~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-~~~~~~fD~i~ 121 (187)
T 2fhp_A 44 DGGMALDLYSGSGGLAIEAVS-RGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQF-YEEKLQFDLVL 121 (187)
T ss_dssp SSCEEEETTCTTCHHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHH-HHTTCCEEEEE
T ss_pred CCCCEEEeCCccCHHHHHHHH-cCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHH-HhcCCCCCEEE
Confidence 467999999999999999887 4568999999999999999999998887 47999999998864322 11367899998
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHH--HhhccCCeEEEEEeCc
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAV--SDLLVHDGKVFLQSDI 350 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i--~~~LkpgG~l~~~td~ 350 (420)
++. |+... ..+.++..+ .++|+|||.+++.+..
T Consensus 122 ~~~--~~~~~-------~~~~~~~~l~~~~~L~~gG~l~~~~~~ 156 (187)
T 2fhp_A 122 LDP--PYAKQ-------EIVSQLEKMLERQLLTNEAVIVCETDK 156 (187)
T ss_dssp ECC--CGGGC-------CHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred ECC--CCCch-------hHHHHHHHHHHhcccCCCCEEEEEeCC
Confidence 863 33211 113556666 8899999999998744
No 102
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.44 E-value=1.4e-12 Score=123.06 Aligned_cols=81 Identities=10% Similarity=0.102 Sum_probs=67.3
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCc-EEEEEcChhhhhhhhhccC-CCeEeEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITN-GYFIATNATSTFRSIVASY-PGKLILV 307 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~n-v~~~~~Da~~~~~~~~~~~-~~~~d~i 307 (420)
++.+|||+|||+|.++..++++.|+.+++|+|+|+.+++.|++++...++++ ++++++|+.+.+...++.. +.+||.|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i 144 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFC 144 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEE
Confidence 3578999999999999999999888999999999999999999999988875 9999999876211122101 2589999
Q ss_pred EEe
Q 014711 308 SIQ 310 (420)
Q Consensus 308 ~~~ 310 (420)
+++
T Consensus 145 ~~n 147 (254)
T 2h00_A 145 MCN 147 (254)
T ss_dssp EEC
T ss_pred EEC
Confidence 987
No 103
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.43 E-value=1.4e-12 Score=127.75 Aligned_cols=130 Identities=15% Similarity=0.174 Sum_probs=101.3
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHH--hC---CCcEEEEEcChhhhhhhhhccCCCeE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQL--SG---ITNGYFIATNATSTFRSIVASYPGKL 304 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~--~~---l~nv~~~~~Da~~~~~~~~~~~~~~~ 304 (420)
++.+|||||||+|.++..+++..|..+++++|+++.+++.|++++.. .+ .++++++++|+.+.++. .+++|
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~----~~~~f 152 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLER----TEERY 152 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHH----CCCCE
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHh----cCCCc
Confidence 46799999999999999999987888999999999999999998764 22 46899999999886432 36789
Q ss_pred eEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCc-----HHHHHHHHHHHHHc
Q 014711 305 ILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI-----EEVMLRMKQQFLEY 364 (420)
Q Consensus 305 d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~-----~~~~~~~~~~l~~~ 364 (420)
|.|++..++|+.. ..+...+...++++.+.++|+|||.|++.+.. ......+.+.+++.
T Consensus 153 D~Ii~d~~~~~~~-~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~l~~~ 216 (314)
T 1uir_A 153 DVVIIDLTDPVGE-DNPARLLYTVEFYRLVKAHLNPGGVMGMQTGMILLTHHRVHPVVHRTVREA 216 (314)
T ss_dssp EEEEEECCCCBST-TCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEEECC---CHHHHHHHHHHTT
T ss_pred cEEEECCCCcccc-cCcchhccHHHHHHHHHHhcCCCcEEEEEccCccccCHHHHHHHHHHHHHH
Confidence 9999998887611 11223455679999999999999999997532 23345566666654
No 104
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.43 E-value=6.1e-13 Score=118.22 Aligned_cols=107 Identities=18% Similarity=0.189 Sum_probs=86.2
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCC-cEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGIT-NGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~-nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
++..|||+|||+|.++..+++. +..+++|+|+|+.+++.|++++...++. |+.++++|+.+.++. .+..||.|+
T Consensus 31 ~~~~vLDlGcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~----~~~~fD~i~ 105 (177)
T 2esr_A 31 NGGRVLDLFAGSGGLAIEAVSR-GMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDC----LTGRFDLVF 105 (177)
T ss_dssp CSCEEEEETCTTCHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHH----BCSCEEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHh----hcCCCCEEE
Confidence 4678999999999999999987 6689999999999999999999888875 799999999886432 246799998
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHH--hhccCCeEEEEEeCc
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVS--DLLVHDGKVFLQSDI 350 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~--~~LkpgG~l~~~td~ 350 (420)
++ .|+. . ...+++++.+. ++|+|||.+++.+..
T Consensus 106 ~~--~~~~----~---~~~~~~~~~l~~~~~L~~gG~l~~~~~~ 140 (177)
T 2esr_A 106 LD--PPYA----K---ETIVATIEALAAKNLLSEQVMVVCETDK 140 (177)
T ss_dssp EC--CSSH----H---HHHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred EC--CCCC----c---chHHHHHHHHHhCCCcCCCcEEEEEECC
Confidence 86 2331 1 11246677776 999999999998754
No 105
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.43 E-value=1.1e-12 Score=124.54 Aligned_cols=105 Identities=16% Similarity=0.195 Sum_probs=88.4
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCC-cEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGIT-NGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~-nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
++.+|||||||+|.++..+++.+ ..+++|+|+|+.+++.|++++...++. ++.++++|+.++ +.++++||.|+
T Consensus 61 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-----~~~~~~fD~v~ 134 (273)
T 3bus_A 61 SGDRVLDVGCGIGKPAVRLATAR-DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDL-----PFEDASFDAVW 134 (273)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHS-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC-----CSCTTCEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccC-----CCCCCCccEEE
Confidence 46899999999999999999986 689999999999999999999888875 699999999875 22568999999
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEe
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 348 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~t 348 (420)
+...-.+..+. ..+++++.++|||||++++.+
T Consensus 135 ~~~~l~~~~~~--------~~~l~~~~~~L~pgG~l~i~~ 166 (273)
T 3bus_A 135 ALESLHHMPDR--------GRALREMARVLRPGGTVAIAD 166 (273)
T ss_dssp EESCTTTSSCH--------HHHHHHHHTTEEEEEEEEEEE
T ss_pred EechhhhCCCH--------HHHHHHHHHHcCCCeEEEEEE
Confidence 87544332221 489999999999999999864
No 106
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.43 E-value=6.9e-13 Score=129.72 Aligned_cols=126 Identities=10% Similarity=0.026 Sum_probs=98.5
Q ss_pred CEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEEeC
Q 014711 232 PLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQC 311 (420)
Q Consensus 232 ~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~~f 311 (420)
.+|||||||+|.++..+++.+|+.+++++|+++.+++.|+++.....-.+++++++|+.+++... .+++||.|++..
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~---~~~~fDvIi~D~ 167 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESF---TPASRDVIIRDV 167 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTC---CTTCEEEEEECC
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhc---cCCCCCEEEECC
Confidence 38999999999999999999999999999999999999999876444468999999999875321 367899999976
Q ss_pred CCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCc-H--HHHHHHHHHHHHc
Q 014711 312 PNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI-E--EVMLRMKQQFLEY 364 (420)
Q Consensus 312 pdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~-~--~~~~~~~~~l~~~ 364 (420)
.+++... ..+...+|++.++++|+|||.|++.+.. . .+...+.+.+.+.
T Consensus 168 ~~~~~~~----~~L~t~efl~~~~r~LkpgGvlv~~~~~~~~~~~~~~~~~tL~~v 219 (317)
T 3gjy_A 168 FAGAITP----QNFTTVEFFEHCHRGLAPGGLYVANCGDHSDLRGAKSELAGMMEV 219 (317)
T ss_dssp STTSCCC----GGGSBHHHHHHHHHHEEEEEEEEEEEEECTTCHHHHHHHHHHHHH
T ss_pred CCccccc----hhhhHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHH
Confidence 6665221 2345579999999999999999987632 1 2233455555543
No 107
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.43 E-value=6.6e-13 Score=124.55 Aligned_cols=128 Identities=17% Similarity=0.174 Sum_probs=96.2
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
.+.+|||||||+|.++..+++.. ..+++|+|+|+.+++.|++++... .++.++++|+.++ +.++++||.|++
T Consensus 93 ~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~~~-----~~~~~~fD~v~~ 164 (254)
T 1xtp_A 93 GTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAGM--PVGKFILASMETA-----TLPPNTYDLIVI 164 (254)
T ss_dssp CCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTTS--SEEEEEESCGGGC-----CCCSSCEEEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhccC--CceEEEEccHHHC-----CCCCCCeEEEEE
Confidence 46899999999999999999886 567999999999999999987644 6899999999875 224679999998
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHH---------------HHHHHHHHHHHcCCceeEe
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEE---------------VMLRMKQQFLEYGKGKLVL 371 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~---------------~~~~~~~~l~~~g~~~~~~ 371 (420)
.+.-.+.... ....+++++.++|||||++++.+.... ..+++.+.+++.||..+.+
T Consensus 165 ~~~l~~~~~~------~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 235 (254)
T 1xtp_A 165 QWTAIYLTDA------DFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVVKE 235 (254)
T ss_dssp ESCGGGSCHH------HHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEEEE
T ss_pred cchhhhCCHH------HHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEEEe
Confidence 7432221100 124899999999999999999752100 1245667777777776543
No 108
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.43 E-value=1.7e-12 Score=124.87 Aligned_cols=127 Identities=12% Similarity=0.183 Sum_probs=100.7
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHh--CC--CcEEEEEcChhhhhhhhhccCCCeEe
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLS--GI--TNGYFIATNATSTFRSIVASYPGKLI 305 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~--~l--~nv~~~~~Da~~~~~~~~~~~~~~~d 305 (420)
++.+|||||||+|.++..+++..|..+++++|+++.+++.|++++... ++ ++++++++|+.+.++. .+++||
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~----~~~~fD 150 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAK----SENQYD 150 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHT----CCSCEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhh----CCCCee
Confidence 468999999999999999998777889999999999999999987542 23 5799999999886532 357899
Q ss_pred EEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCc----HHHHHHHHHHHHHc
Q 014711 306 LVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI----EEVMLRMKQQFLEY 364 (420)
Q Consensus 306 ~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~----~~~~~~~~~~l~~~ 364 (420)
.|++..++|+... ..+...++++.+.++|+|||.+++.+.. ......+.+.+++.
T Consensus 151 ~Ii~d~~~~~~~~----~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~ 209 (275)
T 1iy9_A 151 VIMVDSTEPVGPA----VNLFTKGFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEI 209 (275)
T ss_dssp EEEESCSSCCSCC----CCCSTTHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTT
T ss_pred EEEECCCCCCCcc----hhhhHHHHHHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHHHh
Confidence 9999877775321 1234458999999999999999998643 34455666677765
No 109
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.43 E-value=8.8e-13 Score=120.62 Aligned_cols=106 Identities=14% Similarity=0.161 Sum_probs=84.5
Q ss_pred CCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEEe
Q 014711 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQ 310 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~~ 310 (420)
+.+|||+|||+|.+++.++++. ..+|+|+|+|+.+++.|++++...++.|++++++|+.+.++ ..+++||.|+++
T Consensus 55 ~~~vLDlgcG~G~~~~~l~~~~-~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~----~~~~~fD~V~~~ 129 (202)
T 2fpo_A 55 DAQCLDCFAGSGALGLEALSRY-AAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLA----QKGTPHNIVFVD 129 (202)
T ss_dssp TCEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHS----SCCCCEEEEEEC
T ss_pred CCeEEEeCCCcCHHHHHHHhcC-CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHh----hcCCCCCEEEEC
Confidence 5789999999999999988774 24899999999999999999999988899999999988632 135689999886
Q ss_pred CCCCCCCCcchhhhhhHHHHHHHHHh--hccCCeEEEEEeCc
Q 014711 311 CPNPDFNRPEHRWRMVQRSLVEAVSD--LLVHDGKVFLQSDI 350 (420)
Q Consensus 311 fpdp~~k~~~~k~Rl~~~~~l~~i~~--~LkpgG~l~~~td~ 350 (420)
.| +.. . ....+++.+.+ +|+|||.+++.+..
T Consensus 130 ~p--~~~-~------~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 130 PP--FRR-G------LLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp CS--SST-T------THHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred CC--CCC-C------cHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 32 321 1 11367777765 59999999998754
No 110
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.43 E-value=3.4e-12 Score=122.32 Aligned_cols=104 Identities=15% Similarity=0.204 Sum_probs=84.2
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCC-cEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGIT-NGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~-nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
++.+|||||||+|.++..+++.++ .+++|+|+|+.+++.|++++...++. ++.++++|+.++ +++||.|+
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~--------~~~fD~v~ 134 (287)
T 1kpg_A 64 PGMTLLDVGCGWGATMMRAVEKYD-VNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQF--------DEPVDRIV 134 (287)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGC--------CCCCSEEE
T ss_pred CcCEEEEECCcccHHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhC--------CCCeeEEE
Confidence 467999999999999999997764 49999999999999999999877764 799999999764 27899998
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEe
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 348 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~t 348 (420)
+...-.+..... ...+++++.++|||||.+++.+
T Consensus 135 ~~~~l~~~~~~~------~~~~l~~~~~~LkpgG~l~~~~ 168 (287)
T 1kpg_A 135 SIGAFEHFGHER------YDAFFSLAHRLLPADGVMLLHT 168 (287)
T ss_dssp EESCGGGTCTTT------HHHHHHHHHHHSCTTCEEEEEE
T ss_pred EeCchhhcChHH------HHHHHHHHHHhcCCCCEEEEEE
Confidence 874222111111 1489999999999999999864
No 111
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.42 E-value=4.8e-13 Score=122.86 Aligned_cols=150 Identities=11% Similarity=0.087 Sum_probs=104.0
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
.+.+|||||||+|.++..+++. ..+++|+|+|+.+++.|++++. .|+.++++|+.++ +.. ++||.|++
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~d~~~~-----~~~-~~fD~v~~ 112 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLA--GRTVYGIEPSREMRMIAKEKLP----KEFSITEGDFLSF-----EVP-TSIDTIVS 112 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHT--TCEEEEECSCHHHHHHHHHHSC----TTCCEESCCSSSC-----CCC-SCCSEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHhC--CCeEEEEeCCHHHHHHHHHhCC----CceEEEeCChhhc-----CCC-CCeEEEEE
Confidence 4679999999999999999988 6799999999999999998864 5789999999876 213 78999998
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEe---CcHHHHHHHHHHHHHcCCceeEeeccccccccCCCCCC
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS---DIEEVMLRMKQQFLEYGKGKLVLVQDECDTKTNQGGWL 386 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~t---d~~~~~~~~~~~l~~~g~~~~~~~~D~~~~~~~~~~~~ 386 (420)
...-.+.... ....+++++.++|||||.+++.+ +...........+...++... ..+. .
T Consensus 113 ~~~l~~~~~~------~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-----~----- 174 (220)
T 3hnr_A 113 TYAFHHLTDD------EKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQL--ANDL-----Q----- 174 (220)
T ss_dssp ESCGGGSCHH------HHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHH--HHHH-----H-----
T ss_pred CcchhcCChH------HHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccc--hhhc-----c-----
Confidence 7433321111 11358999999999999999973 334444445555555554321 1110 0
Q ss_pred CCCCCCCCCHHHHHHHHCCCCeEE
Q 014711 387 GENSFGVRSDWEQHVIDRGAPMYR 410 (420)
Q Consensus 387 ~~~~~~~~T~~E~~~~~~G~~i~~ 410 (420)
........+++..+.+.|..+..
T Consensus 175 -~~~~~~~~~~~~~l~~aGf~v~~ 197 (220)
T 3hnr_A 175 -TEYYTRIPVMQTIFENNGFHVTF 197 (220)
T ss_dssp -HSCCCBHHHHHHHHHHTTEEEEE
T ss_pred -hhhcCCHHHHHHHHHHCCCEEEE
Confidence 00112335667788888876544
No 112
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.42 E-value=1.2e-12 Score=126.42 Aligned_cols=127 Identities=10% Similarity=0.101 Sum_probs=101.0
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhC----CCcEEEEEcChhhhhhhhhccCCCeEe
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSG----ITNGYFIATNATSTFRSIVASYPGKLI 305 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~----l~nv~~~~~Da~~~~~~~~~~~~~~~d 305 (420)
++.+|||||||+|..+..+++..|..+++++|+++.+++.|++++...+ .+|++++++|+.+.++. .+++||
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~----~~~~fD 153 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLEN----VTNTYD 153 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHH----CCSCEE
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHh----CCCCce
Confidence 4679999999999999999988788999999999999999999876432 36899999999886432 367899
Q ss_pred EEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCc----HHHHHHHHHHHHHc
Q 014711 306 LVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI----EEVMLRMKQQFLEY 364 (420)
Q Consensus 306 ~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~----~~~~~~~~~~l~~~ 364 (420)
.|++..++|+. +...+.+.++++.+.++|+|||.+++.+.. ......+.+.+++.
T Consensus 154 ~Ii~d~~~~~~----~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~ 212 (283)
T 2i7c_A 154 VIIVDSSDPIG----PAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKL 212 (283)
T ss_dssp EEEEECCCTTT----GGGGGSSHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTT
T ss_pred EEEEcCCCCCC----cchhhhHHHHHHHHHHhcCCCcEEEEECCCcccCHHHHHHHHHHHHHH
Confidence 99998888762 223455579999999999999999998643 23344555556554
No 113
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.42 E-value=2.5e-13 Score=129.46 Aligned_cols=97 Identities=12% Similarity=0.071 Sum_probs=80.1
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
...+|||||||+|.++..|++.+ .+|+|+|+|+.|++.|++ .+|+.++++|+.++ +.++++||.|++
T Consensus 39 ~~~~vLDvGcGtG~~~~~l~~~~--~~v~gvD~s~~ml~~a~~------~~~v~~~~~~~e~~-----~~~~~sfD~v~~ 105 (257)
T 4hg2_A 39 ARGDALDCGCGSGQASLGLAEFF--ERVHAVDPGEAQIRQALR------HPRVTYAVAPAEDT-----GLPPASVDVAIA 105 (257)
T ss_dssp CSSEEEEESCTTTTTHHHHHTTC--SEEEEEESCHHHHHTCCC------CTTEEEEECCTTCC-----CCCSSCEEEEEE
T ss_pred CCCCEEEEcCCCCHHHHHHHHhC--CEEEEEeCcHHhhhhhhh------cCCceeehhhhhhh-----cccCCcccEEEE
Confidence 45789999999999999999884 689999999999987743 36899999999876 336899999998
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEe
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 348 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~t 348 (420)
...-.|+. .+.+++++.|+|||||.|.+.+
T Consensus 106 ~~~~h~~~---------~~~~~~e~~rvLkpgG~l~~~~ 135 (257)
T 4hg2_A 106 AQAMHWFD---------LDRFWAELRRVARPGAVFAAVT 135 (257)
T ss_dssp CSCCTTCC---------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeehhHhh---------HHHHHHHHHHHcCCCCEEEEEE
Confidence 75444431 1479999999999999998864
No 114
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.42 E-value=1e-12 Score=121.34 Aligned_cols=107 Identities=19% Similarity=0.322 Sum_probs=86.1
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCC-----CcEEEEEcChhhhhhhhhccCCCeE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGI-----TNGYFIATNATSTFRSIVASYPGKL 304 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l-----~nv~~~~~Da~~~~~~~~~~~~~~~ 304 (420)
++.+|||+|||+|.++..+++. ..+++|+|+|+.+++.|++++...++ .++.++++|+..+ +..+++|
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~-----~~~~~~~ 102 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASK--GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSL-----SFHDSSF 102 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSC-----CSCTTCE
T ss_pred CCCeEEEECCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEeccccc-----CCCCCce
Confidence 4689999999999999999998 67999999999999999999887765 3689999999875 2257899
Q ss_pred eEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEe
Q 014711 305 ILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 348 (420)
Q Consensus 305 d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~t 348 (420)
|.|++...-.+..+. . ....+++.+.++|||||++++.+
T Consensus 103 D~v~~~~~l~~~~~~--~---~~~~~l~~~~~~L~pgG~l~~~~ 141 (235)
T 3sm3_A 103 DFAVMQAFLTSVPDP--K---ERSRIIKEVFRVLKPGAYLYLVE 141 (235)
T ss_dssp EEEEEESCGGGCCCH--H---HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEEcchhhcCCCH--H---HHHHHHHHHHHHcCCCeEEEEEE
Confidence 999987433222111 1 11379999999999999999864
No 115
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.42 E-value=1.9e-12 Score=124.82 Aligned_cols=124 Identities=10% Similarity=0.118 Sum_probs=96.6
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHh-----------CCCcEEEEEcChhhhhhhhhc
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLS-----------GITNGYFIATNATSTFRSIVA 298 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~-----------~l~nv~~~~~Da~~~~~~~~~ 298 (420)
++.+|||||||+|.++..+++. |..+++++|+++.+++.|++++ .. ..++++++++|+.+.+..
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~--- 149 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN--- 149 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH---
T ss_pred CCCeEEEEcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc---
Confidence 4678999999999999999998 8889999999999999999987 33 235799999999876431
Q ss_pred cCCCeEeEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCc----HHHHHHHHHHHHHc
Q 014711 299 SYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI----EEVMLRMKQQFLEY 364 (420)
Q Consensus 299 ~~~~~~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~----~~~~~~~~~~l~~~ 364 (420)
+++||.|++..++|+.. ...+...++++.+.++|+|||.+++.+.. ......+.+.+++.
T Consensus 150 --~~~fD~Ii~d~~~~~~~----~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~ 213 (281)
T 1mjf_A 150 --NRGFDVIIADSTDPVGP----AKVLFSEEFYRYVYDALNNPGIYVTQAGSVYLFTDELISAYKEMKKV 213 (281)
T ss_dssp --CCCEEEEEEECCCCC---------TTSHHHHHHHHHHEEEEEEEEEEEEETTTSHHHHHHHHHHHHHH
T ss_pred --cCCeeEEEECCCCCCCc----chhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHH
Confidence 56899999998887622 12334568999999999999999997533 33445555556554
No 116
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.42 E-value=1.5e-12 Score=126.98 Aligned_cols=126 Identities=13% Similarity=0.157 Sum_probs=93.8
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHH--hC--CCcEEEEEcChhhhhhhhhccCCCeEe
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQL--SG--ITNGYFIATNATSTFRSIVASYPGKLI 305 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~--~~--l~nv~~~~~Da~~~~~~~~~~~~~~~d 305 (420)
++.+|||||||+|.++..++++.|..+++++|+++.+++.|++++.. .+ .++++++++|+.+.++. .+++||
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~----~~~~fD 170 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQ----NQDAFD 170 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHT----CSSCEE
T ss_pred CCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhh----CCCCce
Confidence 46799999999999999999988889999999999999999998765 23 35799999999886432 367899
Q ss_pred EEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCc----HHHHHHHHHHHHH
Q 014711 306 LVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI----EEVMLRMKQQFLE 363 (420)
Q Consensus 306 ~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~----~~~~~~~~~~l~~ 363 (420)
.|++..++|+... ..+...++++.+.++|+|||.|++.+.. ......+.+.+++
T Consensus 171 ~Ii~d~~~~~~~~----~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~ 228 (304)
T 2o07_A 171 VIITDSSDPMGPA----ESLFKESYYQLMKTALKEDGVLCCQGECQWLHLDLIKEMRQFCQS 228 (304)
T ss_dssp EEEEECC---------------CHHHHHHHHHEEEEEEEEEEEECTTTCHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCcc----hhhhHHHHHHHHHhccCCCeEEEEecCCcccchHHHHHHHHHHHH
Confidence 9999888775221 1233458999999999999999997622 2334445555544
No 117
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.42 E-value=1.1e-12 Score=126.42 Aligned_cols=128 Identities=13% Similarity=0.032 Sum_probs=99.8
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCC-cEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGIT-NGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~-nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
.+.+|||||||+|.++..+++.+ +.+++|+|+|+.+++.|++++...++. +++++++|+.++ +.++++||.|+
T Consensus 82 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-----~~~~~~fD~v~ 155 (297)
T 2o57_A 82 RQAKGLDLGAGYGGAARFLVRKF-GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEI-----PCEDNSYDFIW 155 (297)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSC-----SSCTTCEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccC-----CCCCCCEeEEE
Confidence 46799999999999999999986 469999999999999999999888874 799999999875 22578999999
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCc----------HH-----------HHHHHHHHHHHcCCc
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI----------EE-----------VMLRMKQQFLEYGKG 367 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~----------~~-----------~~~~~~~~l~~~g~~ 367 (420)
+...-.+..+ ...+++++.++|||||+|++.+-. .. ....+.+.+++.||.
T Consensus 156 ~~~~l~~~~~--------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 227 (297)
T 2o57_A 156 SQDAFLHSPD--------KLKVFQECARVLKPRGVMAITDPMKEDGIDKSSIQPILDRIKLHDMGSLGLYRSLAKECGLV 227 (297)
T ss_dssp EESCGGGCSC--------HHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGGHHHHHHHTCSSCCCHHHHHHHHHHTTEE
T ss_pred ecchhhhcCC--------HHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHHHHHHHHhcCCCCCCHHHHHHHHHHCCCe
Confidence 8743332211 148999999999999999987411 00 123455678888887
Q ss_pred eeEe
Q 014711 368 KLVL 371 (420)
Q Consensus 368 ~~~~ 371 (420)
.+.+
T Consensus 228 ~~~~ 231 (297)
T 2o57_A 228 TLRT 231 (297)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6544
No 118
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.42 E-value=5.8e-13 Score=128.77 Aligned_cols=110 Identities=16% Similarity=0.197 Sum_probs=86.4
Q ss_pred CCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCC---CcEEEEEcChhhhhhhhhccCCCeEeEE
Q 014711 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGI---TNGYFIATNATSTFRSIVASYPGKLILV 307 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l---~nv~~~~~Da~~~~~~~~~~~~~~~d~i 307 (420)
+.+|||||||+|.++..+++. ..+|+|+|+|+.+++.|++++...++ .|+.++++|+.++ + .+++||.|
T Consensus 83 ~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~-----~-~~~~fD~v 154 (299)
T 3g2m_A 83 SGPVLELAAGMGRLTFPFLDL--GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAF-----A-LDKRFGTV 154 (299)
T ss_dssp CSCEEEETCTTTTTHHHHHTT--TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBC-----C-CSCCEEEE
T ss_pred CCcEEEEeccCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcC-----C-cCCCcCEE
Confidence 458999999999999999988 57899999999999999999887664 6899999999875 2 36789998
Q ss_pred EEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHH
Q 014711 308 SIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEV 353 (420)
Q Consensus 308 ~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~ 353 (420)
++.+.-..+... -....+|+++.++|||||+|++.+.+...
T Consensus 155 ~~~~~~~~~~~~-----~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 195 (299)
T 3g2m_A 155 VISSGSINELDE-----ADRRGLYASVREHLEPGGKFLLSLAMSEA 195 (299)
T ss_dssp EECHHHHTTSCH-----HHHHHHHHHHHHHEEEEEEEEEEEECCHH
T ss_pred EECCcccccCCH-----HHHHHHHHHHHHHcCCCcEEEEEeecCcc
Confidence 764211110000 01248999999999999999998755543
No 119
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.41 E-value=1.6e-12 Score=119.04 Aligned_cols=101 Identities=16% Similarity=0.162 Sum_probs=85.6
Q ss_pred CCEEEEEcCCccHHHHHHHHhCC-CCeEEEEeCChHHHHHHHHHhHHhCCC-cEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 231 QPLVVDIGSGNGLFLLGMARKRK-DLNFLGLEVNGKLVTHCRDSLQLSGIT-NGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~~P-~~~viGiDis~~~i~~A~~~~~~~~l~-nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
+.+|||||||+|.++..+++..| +.+++++|+|+.+++.|++++...++. +++++++|+.+.++. .++ ||.|+
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~----~~~-fD~v~ 131 (210)
T 3c3p_A 57 PQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAG----QRD-IDILF 131 (210)
T ss_dssp CSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTT----CCS-EEEEE
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhcc----CCC-CCEEE
Confidence 57899999999999999999988 889999999999999999999888876 599999999876431 245 99998
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
+..+.+ ..+.+++.+.+.|||||.+++.
T Consensus 132 ~~~~~~-----------~~~~~l~~~~~~LkpgG~lv~~ 159 (210)
T 3c3p_A 132 MDCDVF-----------NGADVLERMNRCLAKNALLIAV 159 (210)
T ss_dssp EETTTS-----------CHHHHHHHHGGGEEEEEEEEEE
T ss_pred EcCChh-----------hhHHHHHHHHHhcCCCeEEEEE
Confidence 873211 1248999999999999999884
No 120
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.41 E-value=1e-12 Score=121.01 Aligned_cols=105 Identities=16% Similarity=0.199 Sum_probs=85.0
Q ss_pred CCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEEe
Q 014711 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQ 310 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~~ 310 (420)
+.+|||+|||+|.++..+++..| +++|+|+|+.+++.|++++...+ .+++++++|+.++ +.+++++|.|+++
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~~~-----~~~~~~~D~v~~~ 110 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKSRE-SNVEFIVGDARKL-----SFEDKTFDYVIFI 110 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT-CCCEEEECCTTSC-----CSCTTCEEEEEEE
T ss_pred CCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhcC-CCceEEECchhcC-----CCCCCcEEEEEEc
Confidence 67899999999999999999876 89999999999999999988776 6899999999875 1246789999987
Q ss_pred CCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeC
Q 014711 311 CPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSD 349 (420)
Q Consensus 311 fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td 349 (420)
.+-.+.... -...+++.+.++|||||.+++...
T Consensus 111 ~~~~~~~~~------~~~~~l~~~~~~L~~gG~l~~~~~ 143 (227)
T 1ve3_A 111 DSIVHFEPL------ELNQVFKEVRRVLKPSGKFIMYFT 143 (227)
T ss_dssp SCGGGCCHH------HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CchHhCCHH------HHHHHHHHHHHHcCCCcEEEEEec
Confidence 431121111 114799999999999999988753
No 121
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.41 E-value=6.5e-13 Score=123.63 Aligned_cols=128 Identities=12% Similarity=0.079 Sum_probs=98.4
Q ss_pred CCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhC-CCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSG-ITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~-l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
+.+|||||||+|.++..+++ +..+|+|+|+|+.+++.|++++...+ ..|++|+++|+.++. ++.+||.|++
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~------~~~~fD~v~~ 138 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMAS--PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR------PTELFDLIFD 138 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCB--TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC------CSSCEEEEEE
T ss_pred CCCEEEeCCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC------CCCCeeEEEE
Confidence 35899999999999999987 47899999999999999999987643 357999999998752 3568999998
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcH----------HHHHHHHHHHHHcCCceeEee
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIE----------EVMLRMKQQFLEYGKGKLVLV 372 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~----------~~~~~~~~~l~~~g~~~~~~~ 372 (420)
...-.+.... ....+++.+.++|||||++++..-.. ...+++.+.+++.||..+.+.
T Consensus 139 ~~~l~~~~~~------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 205 (235)
T 3lcc_A 139 YVFFCAIEPE------MRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVSVE 205 (235)
T ss_dssp ESSTTTSCGG------GHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEEEE
T ss_pred ChhhhcCCHH------HHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEEEE
Confidence 7544332211 12489999999999999999854211 114567888899998876553
No 122
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.41 E-value=1.5e-12 Score=120.42 Aligned_cols=128 Identities=15% Similarity=0.146 Sum_probs=91.2
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCC-CCeEEEEeCChHHHHHHHHHhHHhCCC-cEEEEEcChhhhhhhhhc-cCCCeEeE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRK-DLNFLGLEVNGKLVTHCRDSLQLSGIT-NGYFIATNATSTFRSIVA-SYPGKLIL 306 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P-~~~viGiDis~~~i~~A~~~~~~~~l~-nv~~~~~Da~~~~~~~~~-~~~~~~d~ 306 (420)
.+.+|||||||+|.+++.+|+..| +.+|+|+|+++.+++.|++++...++. +++++++|+.+.++..-. ...++||.
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~ 137 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDM 137 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCSE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceEE
Confidence 357899999999999999999864 889999999999999999999999986 599999999886443210 01268999
Q ss_pred EEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHHHHHHHHHHHHcCC
Q 014711 307 VSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGK 366 (420)
Q Consensus 307 i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~~~~~~~~l~~~g~ 366 (420)
|++..... +. ....++++.+ +.|||||.|++..-...-.....+.+.+++.
T Consensus 138 V~~d~~~~-----~~---~~~~~~~~~~-~~LkpgG~lv~~~~~~~~~~~~~~~l~~~~~ 188 (221)
T 3u81_A 138 VFLDHWKD-----RY---LPDTLLLEKC-GLLRKGTVLLADNVIVPGTPDFLAYVRGSSS 188 (221)
T ss_dssp EEECSCGG-----GH---HHHHHHHHHT-TCCCTTCEEEESCCCCCCCHHHHHHHHHCTT
T ss_pred EEEcCCcc-----cc---hHHHHHHHhc-cccCCCeEEEEeCCCCcchHHHHHHHhhCCC
Confidence 98852111 11 1112566666 9999999998842111111234555666653
No 123
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.41 E-value=1.5e-12 Score=121.64 Aligned_cols=124 Identities=14% Similarity=0.083 Sum_probs=101.1
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCc-EEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITN-GYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~n-v~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
++.+|+|||||+|.+++.+|+..|..+++|+|+++.+++.|++|+..+++.+ +++.++|+.+.+. +...||.|+
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~-----~~~~~D~Iv 95 (230)
T 3lec_A 21 KGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFE-----EADNIDTIT 95 (230)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCC-----GGGCCCEEE
T ss_pred CCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccc-----cccccCEEE
Confidence 4678999999999999999999998999999999999999999999999875 9999999987631 123699987
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHHHHHHHHHHHHcCCceeE
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGKLV 370 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~~~~~~~~l~~~g~~~~~ 370 (420)
+-- ....++ .+++....+.|+++|+|+++.... .+.+++.+.++||....
T Consensus 96 iaG---------mGg~lI-~~IL~~~~~~l~~~~~lIlqp~~~--~~~lr~~L~~~Gf~i~~ 145 (230)
T 3lec_A 96 ICG---------MGGRLI-ADILNNDIDKLQHVKTLVLQPNNR--EDDLRKWLAANDFEIVA 145 (230)
T ss_dssp EEE---------ECHHHH-HHHHHHTGGGGTTCCEEEEEESSC--HHHHHHHHHHTTEEEEE
T ss_pred EeC---------CchHHH-HHHHHHHHHHhCcCCEEEEECCCC--hHHHHHHHHHCCCEEEE
Confidence 531 111222 378999999999999999987432 45688899999997654
No 124
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.41 E-value=1.7e-12 Score=122.71 Aligned_cols=107 Identities=15% Similarity=0.161 Sum_probs=87.9
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCC-CCeEEEEeCChHHHHHHHHHhHHhCCC-cEEEEEcChhhhhhhhhcc--CCCeEe
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRK-DLNFLGLEVNGKLVTHCRDSLQLSGIT-NGYFIATNATSTFRSIVAS--YPGKLI 305 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P-~~~viGiDis~~~i~~A~~~~~~~~l~-nv~~~~~Da~~~~~~~~~~--~~~~~d 305 (420)
.+.+|||||||+|.+++.+|+..| +.+++++|+|+.+++.|++++.+.++. +++++++|+.+.++..... .+++||
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD 158 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYD 158 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBS
T ss_pred CcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCEE
Confidence 357899999999999999999987 789999999999999999999988884 7999999998875432110 156899
Q ss_pred EEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 306 LVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 306 ~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
.|++..+. . ..+.+++.+.+.|||||.|++.
T Consensus 159 ~V~~d~~~----~-------~~~~~l~~~~~~LkpGG~lv~d 189 (247)
T 1sui_A 159 FIFVDADK----D-------NYLNYHKRLIDLVKVGGVIGYD 189 (247)
T ss_dssp EEEECSCS----T-------THHHHHHHHHHHBCTTCCEEEE
T ss_pred EEEEcCch----H-------HHHHHHHHHHHhCCCCeEEEEe
Confidence 99885321 1 1248999999999999999874
No 125
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.41 E-value=1.8e-12 Score=126.92 Aligned_cols=134 Identities=15% Similarity=0.125 Sum_probs=98.3
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCC-CCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRK-DLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P-~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
.+.+|||+|||+|..+..+|+..+ ...++|+|+|+.+++.+++++.+.++.|+.++++|+.++.. .+++||.|+
T Consensus 118 ~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~-----~~~~fD~Il 192 (315)
T 1ixk_A 118 PGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGE-----LNVEFDKIL 192 (315)
T ss_dssp TTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGG-----GCCCEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhccc-----ccccCCEEE
Confidence 467999999999999999999864 58999999999999999999999999999999999988621 256899999
Q ss_pred EeCCC---C-CCCCcch-----hh-----hhhHHHHHHHHHhhccCCeEEEEEeCc---HHHHHHHHHHHHHcCCce
Q 014711 309 IQCPN---P-DFNRPEH-----RW-----RMVQRSLVEAVSDLLVHDGKVFLQSDI---EEVMLRMKQQFLEYGKGK 368 (420)
Q Consensus 309 ~~fpd---p-~~k~~~~-----k~-----Rl~~~~~l~~i~~~LkpgG~l~~~td~---~~~~~~~~~~l~~~g~~~ 368 (420)
+..|- . +.+..+. .. .-.+.++|+.+.+.|||||++++.|-. ..-.+.+...++++++..
T Consensus 193 ~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~Ene~~v~~~l~~~~~~~ 269 (315)
T 1ixk_A 193 LDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEENEFVIQWALDNFDVEL 269 (315)
T ss_dssp EECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGGGTHHHHHHHHHHSSEEE
T ss_pred EeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChHHhHHHHHHHHhcCCCEE
Confidence 87431 0 1111100 00 113468999999999999999997632 111122444566777543
No 126
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.41 E-value=1.9e-12 Score=124.15 Aligned_cols=113 Identities=14% Similarity=0.120 Sum_probs=87.9
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCC-CcEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGI-TNGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l-~nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
++.+|||||||+|.++..+++. +..+++|+|+|+.+++.|++++...++ .++.++++|+.+. + ++ .+++||.|+
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~--~~-~~~~fD~v~ 138 (298)
T 1ri5_A 64 RGDSVLDLGCGKGGDLLKYERA-GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGR-H--MD-LGKEFDVIS 138 (298)
T ss_dssp TTCEEEEETCTTTTTHHHHHHH-TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTS-C--CC-CSSCEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCcccc-c--cC-CCCCcCEEE
Confidence 4689999999999999998876 556999999999999999999887776 4799999999875 1 11 367899999
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcH
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIE 351 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~ 351 (420)
+.+.-.+. ..+.. ....+++.+.++|||||++++.+.+.
T Consensus 139 ~~~~l~~~-~~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~~ 177 (298)
T 1ri5_A 139 SQFSFHYA-FSTSE---SLDIAQRNIARHLRPGGYFIMTVPSR 177 (298)
T ss_dssp EESCGGGG-GSSHH---HHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred ECchhhhh-cCCHH---HHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 87432110 00111 12479999999999999999987553
No 127
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.40 E-value=8.1e-13 Score=124.29 Aligned_cols=100 Identities=14% Similarity=0.097 Sum_probs=84.8
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
++.+|||||||+|.++..+++.+|..+++|+|+|+.+++.|+++ ..|+.++++|+.++ + ++++||.|++
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~-----~~~~~~~~~d~~~~-----~-~~~~fD~v~~ 101 (259)
T 2p35_A 33 RVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADR-----LPNTNFGKADLATW-----K-PAQKADLLYA 101 (259)
T ss_dssp CCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHH-----STTSEEEECCTTTC-----C-CSSCEEEEEE
T ss_pred CCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh-----CCCcEEEECChhhc-----C-ccCCcCEEEE
Confidence 45789999999999999999999999999999999999999887 45799999999875 2 4678999999
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEe
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 348 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~t 348 (420)
+..-.|..+ ...+++++.++|||||++++.+
T Consensus 102 ~~~l~~~~~--------~~~~l~~~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 102 NAVFQWVPD--------HLAVLSQLMDQLESGGVLAVQM 132 (259)
T ss_dssp ESCGGGSTT--------HHHHHHHHGGGEEEEEEEEEEE
T ss_pred eCchhhCCC--------HHHHHHHHHHhcCCCeEEEEEe
Confidence 864444321 1379999999999999999976
No 128
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.40 E-value=1.8e-12 Score=122.09 Aligned_cols=102 Identities=11% Similarity=0.173 Sum_probs=85.0
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
++.+|||||||+|.++..+++. ..+++|+|+|+.+++.|++++ ..+..|+.++++|+.++ +.++++||.|++
T Consensus 39 ~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~~~~~d~~~~-----~~~~~~fD~v~~ 110 (263)
T 2yqz_A 39 EEPVFLELGVGTGRIALPLIAR--GYRYIALDADAAMLEVFRQKI-AGVDRKVQVVQADARAI-----PLPDESVHGVIV 110 (263)
T ss_dssp SCCEEEEETCTTSTTHHHHHTT--TCEEEEEESCHHHHHHHHHHT-TTSCTTEEEEESCTTSC-----CSCTTCEEEEEE
T ss_pred CCCEEEEeCCcCCHHHHHHHHC--CCEEEEEECCHHHHHHHHHHh-hccCCceEEEEcccccC-----CCCCCCeeEEEE
Confidence 4678999999999999999987 579999999999999999998 45567899999999765 225788999998
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
.+.-.|..+ ...+++++.++|||||.+++.
T Consensus 111 ~~~l~~~~~--------~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 111 VHLWHLVPD--------WPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp ESCGGGCTT--------HHHHHHHHHHHEEEEEEEEEE
T ss_pred CCchhhcCC--------HHHHHHHHHHHCCCCcEEEEE
Confidence 855444321 147999999999999999886
No 129
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.40 E-value=3.8e-12 Score=119.32 Aligned_cols=126 Identities=13% Similarity=0.129 Sum_probs=91.9
Q ss_pred CCCEEEEEcCCccHHHHHHHHh-CCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARK-RKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~-~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
++.+|||+|||+|.++..+|+. .|+..|+|+|+|+.+++...+.+.+. .|+.++++|+..... + ....++||.|+
T Consensus 76 ~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r--~nv~~i~~Da~~~~~-~-~~~~~~~D~I~ 151 (232)
T 3id6_C 76 KGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR--PNIFPLLADARFPQS-Y-KSVVENVDVLY 151 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC--TTEEEEECCTTCGGG-T-TTTCCCEEEEE
T ss_pred CCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc--CCeEEEEcccccchh-h-hccccceEEEE
Confidence 4789999999999999999987 57889999999999987666555443 699999999986421 1 11246899999
Q ss_pred EeCCCCCCCCcchhhhhhHHH-HHHHHHhhccCCeEEEEEeCc---------HHHHHHHHHHHHHcCCceeE
Q 014711 309 IQCPNPDFNRPEHRWRMVQRS-LVEAVSDLLVHDGKVFLQSDI---------EEVMLRMKQQFLEYGKGKLV 370 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~-~l~~i~~~LkpgG~l~~~td~---------~~~~~~~~~~l~~~g~~~~~ 370 (420)
++.+.|+ +.+ ++..+.+.|||||+|++.... +..++...+.+++++|...+
T Consensus 152 ~d~a~~~-----------~~~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~e~~~~~~~~L~~~gf~~~~ 212 (232)
T 3id6_C 152 VDIAQPD-----------QTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLENSNFETIQ 212 (232)
T ss_dssp ECCCCTT-----------HHHHHHHHHHHHEEEEEEEEEEEC-------CCSSSSTTHHHHHHHHTTEEEEE
T ss_pred ecCCChh-----------HHHHHHHHHHHhCCCCeEEEEEEccCCcccCCCHHHHHHHHHHHHHHCCCEEEE
Confidence 9876653 123 445566699999999986311 11234566777888876654
No 130
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.40 E-value=1.5e-12 Score=126.79 Aligned_cols=113 Identities=16% Similarity=0.175 Sum_probs=83.8
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCC------cEEEEEcCh------hhhhhhhh
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGIT------NGYFIATNA------TSTFRSIV 297 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~------nv~~~~~Da------~~~~~~~~ 297 (420)
.+.+|||||||+|..+..+++. ...+|+|+|+|+.|++.|++++...+.. ++.|.+.|+ .++ +..+
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~-~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l-~~~~ 125 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYG-EIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSV-REVF 125 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHH-HTTC
T ss_pred CCCeEEEEecCCcHhHHHHHhc-CCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhh-hccc
Confidence 4678999999999877777664 2468999999999999999998776643 367888888 332 2222
Q ss_pred ccCCCeEeEEEEeCCCCCC-CCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHH
Q 014711 298 ASYPGKLILVSIQCPNPDF-NRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEE 352 (420)
Q Consensus 298 ~~~~~~~d~i~~~fpdp~~-k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~ 352 (420)
++++||.|++.+.-.|. ...|. ..+++.++++|||||+|++.|-+..
T Consensus 126 --~~~~FD~V~~~~~lhy~~~~~~~------~~~l~~~~r~LkpGG~~i~~~~~~~ 173 (302)
T 2vdw_A 126 --YFGKFNIIDWQFAIHYSFHPRHY------ATVMNNLSELTASGGKVLITTMDGD 173 (302)
T ss_dssp --CSSCEEEEEEESCGGGTCSTTTH------HHHHHHHHHHEEEEEEEEEEEECHH
T ss_pred --cCCCeeEEEECchHHHhCCHHHH------HHHHHHHHHHcCCCCEEEEEeCCHH
Confidence 46799999987643221 11111 4899999999999999999875544
No 131
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.40 E-value=4.3e-13 Score=126.47 Aligned_cols=107 Identities=14% Similarity=0.130 Sum_probs=88.2
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCC-CCeEEEEeCChHHHHHHHHHhHHhCCC-cEEEEEcChhhhhhhhhcc-CCCeEeE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRK-DLNFLGLEVNGKLVTHCRDSLQLSGIT-NGYFIATNATSTFRSIVAS-YPGKLIL 306 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P-~~~viGiDis~~~i~~A~~~~~~~~l~-nv~~~~~Da~~~~~~~~~~-~~~~~d~ 306 (420)
.+.+|||||||+|..++.+|+..| +.+|+++|+++.+++.|++++.+.++. |++++++|+.+.++..... .+++||.
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~ 139 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDF 139 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEE
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeE
Confidence 357899999999999999999886 889999999999999999999999986 7999999998875432210 1478999
Q ss_pred EEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 307 VSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 307 i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
|++..+. . ....+++.+.+.|||||.|++.
T Consensus 140 V~~d~~~-----~------~~~~~l~~~~~~LkpGG~lv~d 169 (242)
T 3r3h_A 140 IFIDADK-----T------NYLNYYELALKLVTPKGLIAID 169 (242)
T ss_dssp EEEESCG-----G------GHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEcCCh-----H------HhHHHHHHHHHhcCCCeEEEEE
Confidence 9886321 1 1247899999999999999984
No 132
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.40 E-value=2.1e-12 Score=120.27 Aligned_cols=105 Identities=12% Similarity=0.174 Sum_probs=89.0
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCC-cEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGIT-NGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~-nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
++.+|||||||+|.++..+++..|+.+++|+|+++.+++.|++++...++. ++.++++|+.+.++... .+++||.|+
T Consensus 54 ~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~--~~~~fD~I~ 131 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLE--LYPLFDVLF 131 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHT--TSCCEEEEE
T ss_pred CCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcc--cCCCccEEE
Confidence 357899999999999999999999999999999999999999999988885 69999999988643221 256899999
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
+..+.+ ....+++.+.+.|+|||.+++.
T Consensus 132 ~~~~~~-----------~~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 132 IDAAKG-----------QYRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp EEGGGS-----------CHHHHHHHHGGGEEEEEEEEEE
T ss_pred ECCCHH-----------HHHHHHHHHHHHcCCCeEEEEE
Confidence 875422 1248999999999999999885
No 133
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.40 E-value=3.5e-12 Score=118.58 Aligned_cols=104 Identities=16% Similarity=0.157 Sum_probs=82.6
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
.+.+|||||||+|.++..+++.. ..+++|+|+|+.+++.|+++... .++.++++|+.++ +.++++||.|++
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~---~~~~~~~~d~~~~-----~~~~~~fD~v~~ 113 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEHG-ASYVLGLDLSEKMLARARAAGPD---TGITYERADLDKL-----HLPQDSFDLAYS 113 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHTSCS---SSEEEEECCGGGC-----CCCTTCEEEEEE
T ss_pred CCCEEEEEcCcCCHHHHHHHHCC-CCeEEEEcCCHHHHHHHHHhccc---CCceEEEcChhhc-----cCCCCCceEEEE
Confidence 46799999999999999999873 23999999999999999887643 4799999999875 124678999998
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCc
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI 350 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~ 350 (420)
...-.+... ...+++.+.++|+|||++++.+.+
T Consensus 114 ~~~l~~~~~--------~~~~l~~~~~~L~pgG~l~~~~~~ 146 (243)
T 3bkw_A 114 SLALHYVED--------VARLFRTVHQALSPGGHFVFSTEH 146 (243)
T ss_dssp ESCGGGCSC--------HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred eccccccch--------HHHHHHHHHHhcCcCcEEEEEeCC
Confidence 743222111 137999999999999999997643
No 134
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.39 E-value=1.9e-12 Score=120.42 Aligned_cols=108 Identities=12% Similarity=0.176 Sum_probs=86.0
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
++.+|||||||+|.++..+++. ..+++|+|+|+.+++.|++++...+. ++.++++|+.++ + .+++||.|++
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~--~~~~~~~D~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~-----~-~~~~fD~v~~ 107 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK--FKNTWAVDLSQEMLSEAENKFRSQGL-KPRLACQDISNL-----N-INRKFDLITC 107 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG--SSEEEEECSCHHHHHHHHHHHHHTTC-CCEEECCCGGGC-----C-CSCCEEEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHC--CCcEEEEECCHHHHHHHHHHHhhcCC-CeEEEecccccC-----C-ccCCceEEEE
Confidence 4679999999999999999988 56899999999999999999887776 899999999875 1 2378999988
Q ss_pred eC-CCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcH
Q 014711 310 QC-PNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIE 351 (420)
Q Consensus 310 ~f-pdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~ 351 (420)
.. .-++..... ....+++.+.++|||||.+++.+.+.
T Consensus 108 ~~~~l~~~~~~~-----~~~~~l~~~~~~L~pgG~l~~~~~~~ 145 (246)
T 1y8c_A 108 CLDSTNYIIDSD-----DLKKYFKAVSNHLKEGGVFIFDINSY 145 (246)
T ss_dssp CTTGGGGCCSHH-----HHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred cCccccccCCHH-----HHHHHHHHHHHhcCCCcEEEEEecCH
Confidence 64 222221100 12479999999999999999976543
No 135
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.39 E-value=1.2e-12 Score=128.21 Aligned_cols=127 Identities=13% Similarity=0.117 Sum_probs=93.2
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHh--C--CCcEEEEEcChhhhhhhhhccCCCeEe
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLS--G--ITNGYFIATNATSTFRSIVASYPGKLI 305 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~--~--l~nv~~~~~Da~~~~~~~~~~~~~~~d 305 (420)
++.+|||||||+|.++..+++..|..+++++|+++.+++.|++++... + -++++++++|+.+.++. .+++||
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~----~~~~fD 183 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKN----HKNEFD 183 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHH----CTTCEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHh----cCCCce
Confidence 467899999999999999999888899999999999999999987643 3 35799999999886432 367899
Q ss_pred EEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCc----HHHHHHHHHHHHHc
Q 014711 306 LVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI----EEVMLRMKQQFLEY 364 (420)
Q Consensus 306 ~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~----~~~~~~~~~~l~~~ 364 (420)
.|++..++|+.. ...+...++++.+.++|+|||.+++.+.. ......+.+.+++.
T Consensus 184 ~Ii~d~~~~~~~----~~~l~t~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~v 242 (314)
T 2b2c_A 184 VIITDSSDPVGP----AESLFGQSYYELLRDALKEDGILSSQGESVWLHLPLIAHLVAFNRKI 242 (314)
T ss_dssp EEEECCC-----------------HHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHHH
T ss_pred EEEEcCCCCCCc----chhhhHHHHHHHHHhhcCCCeEEEEECCCcccCHHHHHHHHHHHHHH
Confidence 999987777521 22344468999999999999999998633 23344455555544
No 136
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.39 E-value=6.7e-13 Score=123.22 Aligned_cols=116 Identities=12% Similarity=0.172 Sum_probs=91.9
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccC-CCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASY-PGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~-~~~~d~i~ 308 (420)
++.+|||||||+|.++..+++. ..+|+|+|+|+.+++.|+++ ..|++++++|+.+.+ +.. +++||.|+
T Consensus 48 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~d~~~~~----~~~~~~~fD~v~ 116 (226)
T 3m33_A 48 PQTRVLEAGCGHGPDAARFGPQ--AARWAAYDFSPELLKLARAN-----APHADVYEWNGKGEL----PAGLGAPFGLIV 116 (226)
T ss_dssp TTCEEEEESCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHH-----CTTSEEEECCSCSSC----CTTCCCCEEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHh-----CCCceEEEcchhhcc----CCcCCCCEEEEE
Confidence 4689999999999999999998 67999999999999999887 458999999996432 224 67999999
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHHHHHHHHHHHHcCCceeEe
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGKLVL 371 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~~~~~~~~l~~~g~~~~~~ 371 (420)
++ +++. .+++++.++|||||.++.... ....+.+.+.+.+.|+....+
T Consensus 117 ~~-~~~~-------------~~l~~~~~~LkpgG~l~~~~~-~~~~~~~~~~l~~~Gf~~~~~ 164 (226)
T 3m33_A 117 SR-RGPT-------------SVILRLPELAAPDAHFLYVGP-RLNVPEVPERLAAVGWDIVAE 164 (226)
T ss_dssp EE-SCCS-------------GGGGGHHHHEEEEEEEEEEES-SSCCTHHHHHHHHTTCEEEEE
T ss_pred eC-CCHH-------------HHHHHHHHHcCCCcEEEEeCC-cCCHHHHHHHHHHCCCeEEEE
Confidence 87 3443 688899999999999983322 122345778888999876543
No 137
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.39 E-value=2.4e-12 Score=123.06 Aligned_cols=148 Identities=11% Similarity=0.138 Sum_probs=103.4
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
.+.+|||||||+|.++..+++ |..+++|+|+|+.+++.|+++. .|+.++++|+.++ + .+++||.|++
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~-----~~~~~~~~d~~~~-----~-~~~~fD~v~~ 123 (279)
T 3ccf_A 57 PGEFILDLGCGTGQLTEKIAQ--SGAEVLGTDNAATMIEKARQNY-----PHLHFDVADARNF-----R-VDKPLDAVFS 123 (279)
T ss_dssp TTCEEEEETCTTSHHHHHHHH--TTCEEEEEESCHHHHHHHHHHC-----TTSCEEECCTTTC-----C-CSSCEEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHhhC-----CCCEEEECChhhC-----C-cCCCcCEEEE
Confidence 467999999999999999998 6889999999999999998875 5789999999875 2 2578999998
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCc----HHHHHHHHHHHHHcCCceeEeeccccccccCCCCC
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI----EEVMLRMKQQFLEYGKGKLVLVQDECDTKTNQGGW 385 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~----~~~~~~~~~~l~~~g~~~~~~~~D~~~~~~~~~~~ 385 (420)
...-.|..+ ...+++++.++|||||++++.+.. ......+.+.+...++... + + ..
T Consensus 124 ~~~l~~~~d--------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~-----~~-- 183 (279)
T 3ccf_A 124 NAMLHWVKE--------PEAAIASIHQALKSGGRFVAEFGGKGNIKYILEALYNALETLGIHNP----Q-A-----LN-- 183 (279)
T ss_dssp ESCGGGCSC--------HHHHHHHHHHHEEEEEEEEEEEECTTTTHHHHHHHHHHHHHHTCCCG----G-G-----GC--
T ss_pred cchhhhCcC--------HHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHhcCCccc----c-C-----cC--
Confidence 754333221 137999999999999999987532 2333334444455443210 0 0 00
Q ss_pred CCCCCCCCCCHHHHHHHHCCCCeEEEE
Q 014711 386 LGENSFGVRSDWEQHVIDRGAPMYRLM 412 (420)
Q Consensus 386 ~~~~~~~~~T~~E~~~~~~G~~i~~~~ 412 (420)
........+++..+.+.|+.+....
T Consensus 184 --~~~~~~~~~~~~~l~~aGf~~~~~~ 208 (279)
T 3ccf_A 184 --PWYFPSIGEYVNILEKQGFDVTYAA 208 (279)
T ss_dssp --CCCCCCHHHHHHHHHHHTEEEEEEE
T ss_pred --ceeCCCHHHHHHHHHHcCCEEEEEE
Confidence 0112233556777788887765543
No 138
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.39 E-value=1.7e-12 Score=115.44 Aligned_cols=126 Identities=13% Similarity=0.193 Sum_probs=92.9
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
++.+|||+|||+|.++..+++.. +++|+|+|+.+++. ..|++++++|+.+.+ .+++||.|++
T Consensus 23 ~~~~vLD~GcG~G~~~~~l~~~~---~v~gvD~s~~~~~~---------~~~~~~~~~d~~~~~------~~~~fD~i~~ 84 (170)
T 3q87_B 23 EMKIVLDLGTSTGVITEQLRKRN---TVVSTDLNIRALES---------HRGGNLVRADLLCSI------NQESVDVVVF 84 (170)
T ss_dssp CSCEEEEETCTTCHHHHHHTTTS---EEEEEESCHHHHHT---------CSSSCEEECSTTTTB------CGGGCSEEEE
T ss_pred CCCeEEEeccCccHHHHHHHhcC---cEEEEECCHHHHhc---------ccCCeEEECChhhhc------ccCCCCEEEE
Confidence 35799999999999999999986 99999999999986 357899999997642 3578999998
Q ss_pred eCCCCCCCCcc-hhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHHHHHHHHHHHHcCCceeEeecc
Q 014711 310 QCPNPDFNRPE-HRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGKLVLVQD 374 (420)
Q Consensus 310 ~fpdp~~k~~~-~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~~~~~~~~l~~~g~~~~~~~~D 374 (420)
+.|--|..... .........+++++.+.| |||.+++.+......+.+.+.+++.||....+..+
T Consensus 85 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~~~~~l~~~l~~~gf~~~~~~~~ 149 (170)
T 3q87_B 85 NPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEANRPKEVLARLEERGYGTRILKVR 149 (170)
T ss_dssp CCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGGGCHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecCCCHHHHHHHHHHCCCcEEEEEee
Confidence 74322211110 000000126788888888 99999997755566778889999999987655443
No 139
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.39 E-value=2.4e-12 Score=123.42 Aligned_cols=117 Identities=14% Similarity=0.181 Sum_probs=90.8
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCC-CeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKD-LNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~-~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
++.+|||+|||+|..+..+|+..++ .+++|+|+|+.+++.+++++.+.+++|+.++++|+.++... +...+++||.|+
T Consensus 83 ~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~-~~~~~~~fD~Vl 161 (274)
T 3ajd_A 83 EDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDY-LLKNEIFFDKIL 161 (274)
T ss_dssp TTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHH-HHHTTCCEEEEE
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchh-hhhccccCCEEE
Confidence 4679999999999999999998766 89999999999999999999999999999999999887321 111256899998
Q ss_pred EeCCCCCCCC----cchh--------hhhhHHHHHHHHHhhccCCeEEEEEeC
Q 014711 309 IQCPNPDFNR----PEHR--------WRMVQRSLVEAVSDLLVHDGKVFLQSD 349 (420)
Q Consensus 309 ~~fpdp~~k~----~~~k--------~Rl~~~~~l~~i~~~LkpgG~l~~~td 349 (420)
+.-| +... +++. ..-.+.++++.+.+.|||||++++.|.
T Consensus 162 ~d~P--cs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stc 212 (274)
T 3ajd_A 162 LDAP--CSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTC 212 (274)
T ss_dssp EEEC--CC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEES
T ss_pred EcCC--CCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEEC
Confidence 8732 2110 0000 012346899999999999999999763
No 140
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.39 E-value=3.1e-12 Score=118.49 Aligned_cols=105 Identities=14% Similarity=0.117 Sum_probs=84.4
Q ss_pred CCCEEEEEcCCccHHHHHHHHhC-CCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKR-KDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~-P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
++.+|||+|||+|.++..+++.. |..+++|+|+|+.+++.+++++... .|++++++|+.+.. ...+ .+.+||.|+
T Consensus 73 ~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~--~~v~~~~~d~~~~~-~~~~-~~~~~D~v~ 148 (227)
T 1g8a_A 73 PGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER--RNIVPILGDATKPE-EYRA-LVPKVDVIF 148 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC--TTEEEEECCTTCGG-GGTT-TCCCEEEEE
T ss_pred CCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc--CCCEEEEccCCCcc-hhhc-ccCCceEEE
Confidence 46799999999999999999885 6789999999999999999988654 78999999998742 1111 245899999
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEe
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 348 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~t 348 (420)
+..+.|+ ....++..+.+.|||||++++..
T Consensus 149 ~~~~~~~----------~~~~~l~~~~~~LkpgG~l~~~~ 178 (227)
T 1g8a_A 149 EDVAQPT----------QAKILIDNAEVYLKRGGYGMIAV 178 (227)
T ss_dssp ECCCSTT----------HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECCCCHh----------HHHHHHHHHHHhcCCCCEEEEEE
Confidence 8766443 11255899999999999999863
No 141
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.39 E-value=3.3e-12 Score=119.82 Aligned_cols=107 Identities=16% Similarity=0.164 Sum_probs=88.3
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCC-CCeEEEEeCChHHHHHHHHHhHHhCCC-cEEEEEcChhhhhhhhhcc--CCCeEe
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRK-DLNFLGLEVNGKLVTHCRDSLQLSGIT-NGYFIATNATSTFRSIVAS--YPGKLI 305 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P-~~~viGiDis~~~i~~A~~~~~~~~l~-nv~~~~~Da~~~~~~~~~~--~~~~~d 305 (420)
++.+|||||||+|..++.+|+..| +.+++++|+++.+++.|++++.+.++. +++++++|+.+.++..... .+++||
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD 149 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSYD 149 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCcC
Confidence 357899999999999999999987 799999999999999999999998986 5999999998875433211 146899
Q ss_pred EEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 306 LVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 306 ~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
.|++. .+. . ....+++.+.+.|+|||.+++.
T Consensus 150 ~I~~d---~~~--~------~~~~~l~~~~~~L~pGG~lv~d 180 (237)
T 3c3y_A 150 FGFVD---ADK--P------NYIKYHERLMKLVKVGGIVAYD 180 (237)
T ss_dssp EEEEC---SCG--G------GHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEC---Cch--H------HHHHHHHHHHHhcCCCeEEEEe
Confidence 99874 321 1 1358999999999999999884
No 142
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.38 E-value=1.2e-12 Score=119.75 Aligned_cols=122 Identities=11% Similarity=0.070 Sum_probs=94.4
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
++.+|||||||+|.++..+++. ..+++|+|+|+.+++.|++++ ++.+.++|+..+ + .+++||.|++
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~------~~~~~~~d~~~~-----~-~~~~fD~v~~ 108 (211)
T 3e23_A 43 AGAKILELGCGAGYQAEAMLAA--GFDVDATDGSPELAAEASRRL------GRPVRTMLFHQL-----D-AIDAYDAVWA 108 (211)
T ss_dssp TTCEEEESSCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHH------TSCCEECCGGGC-----C-CCSCEEEEEE
T ss_pred CCCcEEEECCCCCHHHHHHHHc--CCeEEEECCCHHHHHHHHHhc------CCceEEeeeccC-----C-CCCcEEEEEe
Confidence 3679999999999999999988 679999999999999999886 567889998776 2 4789999998
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHH--------------HHHHHHHHHHHcC-CceeEe
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEE--------------VMLRMKQQFLEYG-KGKLVL 371 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~--------------~~~~~~~~l~~~g-~~~~~~ 371 (420)
...-.+... --...+++++.++|||||++++.+.... -.+++.+.+++.| |..+.+
T Consensus 109 ~~~l~~~~~------~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~ 179 (211)
T 3e23_A 109 HACLLHVPR------DELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAV 179 (211)
T ss_dssp CSCGGGSCH------HHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEE
T ss_pred cCchhhcCH------HHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEE
Confidence 743222110 0114799999999999999999742211 2456788888889 887654
No 143
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.38 E-value=7e-12 Score=125.94 Aligned_cols=134 Identities=15% Similarity=0.103 Sum_probs=99.5
Q ss_pred CCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEEe
Q 014711 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQ 310 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~~ 310 (420)
+..|||+|||+|.+++.+|+. ..+|+|+|+|+.+++.|++++..+++.|++|+++|+.+.++.... .+.+||.|++.
T Consensus 210 ~~~VLDlg~G~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~-~~~~fD~Ii~d 286 (382)
T 1wxx_A 210 GERALDVFSYAGGFALHLALG--FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEK-EGERFDLVVLD 286 (382)
T ss_dssp EEEEEEETCTTTHHHHHHHHH--EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHH-TTCCEEEEEEC
T ss_pred CCeEEEeeeccCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHh-cCCCeeEEEEC
Confidence 578999999999999999998 678999999999999999999999999999999999987543221 25689999885
Q ss_pred CCCCCCCCcchhhh--hhHHHHHHHHHhhccCCeEEEEEeCcH-----HHHHHHHHHHHHcCCce
Q 014711 311 CPNPDFNRPEHRWR--MVQRSLVEAVSDLLVHDGKVFLQSDIE-----EVMLRMKQQFLEYGKGK 368 (420)
Q Consensus 311 fpdp~~k~~~~k~R--l~~~~~l~~i~~~LkpgG~l~~~td~~-----~~~~~~~~~l~~~g~~~ 368 (420)
|.-+.+......+ -...+++..+.+.|+|||.+++.+... .+.+.+.+.+.+.+...
T Consensus 287 -pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~ 350 (382)
T 1wxx_A 287 -PPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHMTEPLFYAMVAEAAQDAHRLL 350 (382)
T ss_dssp -CCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTTCCE
T ss_pred -CCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHcCCeE
Confidence 2112211111111 123579999999999999999987542 23334445666766543
No 144
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.38 E-value=1.3e-11 Score=112.32 Aligned_cols=123 Identities=15% Similarity=0.089 Sum_probs=96.1
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
.+..|||+|||+|.++..+++.. ..+++|+|+|+.+++.|++++...++ |+.++++|+.++ +.+||.|++
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~--------~~~~D~v~~ 118 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLLG-AKEVICVEVDKEAVDVLIENLGEFKG-KFKVFIGDVSEF--------NSRVDIVIM 118 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHTGGGTT-SEEEEESCGGGC--------CCCCSEEEE
T ss_pred CcCEEEEeeCCCCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHHHcCC-CEEEEECchHHc--------CCCCCEEEE
Confidence 46789999999999999999873 34899999999999999999988888 899999999875 348999998
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHHHHHHHHHHHHcCCceeE
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGKLV 370 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~~~~~~~~l~~~g~~~~~ 370 (420)
+. |++..+. -....+++.+.+.| |+.+.+.+..+...+.+.+.+.+.|+....
T Consensus 119 ~~--p~~~~~~----~~~~~~l~~~~~~l--~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 171 (207)
T 1wy7_A 119 NP--PFGSQRK----HADRPFLLKAFEIS--DVVYSIHLAKPEVRRFIEKFSWEHGFVVTH 171 (207)
T ss_dssp CC--CCSSSST----TTTHHHHHHHHHHC--SEEEEEEECCHHHHHHHHHHHHHTTEEEEE
T ss_pred cC--CCccccC----CchHHHHHHHHHhc--CcEEEEEeCCcCCHHHHHHHHHHCCCeEEE
Confidence 73 3322221 12347888999988 666655555666677788888998876543
No 145
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.38 E-value=3.1e-12 Score=120.52 Aligned_cols=123 Identities=15% Similarity=0.104 Sum_probs=99.9
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCc-EEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITN-GYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~n-v~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
++.+|||||||+|.+++.+|+..|...++|+|+++.+++.|++|+..+++.| +.+.++|+.+.+. +...||.|+
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~-----~~~~~D~Iv 95 (244)
T 3gnl_A 21 KNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIE-----KKDAIDTIV 95 (244)
T ss_dssp SSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCC-----GGGCCCEEE
T ss_pred CCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccC-----ccccccEEE
Confidence 4678999999999999999999998999999999999999999999999975 9999999987631 123599987
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHHHHHHHHHHHHcCCcee
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGKL 369 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~~~~~~~~l~~~g~~~~ 369 (420)
+.- ....++ .+++....+.|+++++|+++... -...+++.+.++||...
T Consensus 96 iag---------mGg~lI-~~IL~~~~~~L~~~~~lIlq~~~--~~~~lr~~L~~~Gf~i~ 144 (244)
T 3gnl_A 96 IAG---------MGGTLI-RTILEEGAAKLAGVTKLILQPNI--AAWQLREWSEQNNWLIT 144 (244)
T ss_dssp EEE---------ECHHHH-HHHHHHTGGGGTTCCEEEEEESS--CHHHHHHHHHHHTEEEE
T ss_pred EeC---------CchHHH-HHHHHHHHHHhCCCCEEEEEcCC--ChHHHHHHHHHCCCEEE
Confidence 631 111222 37899999999999999998743 24568889999998763
No 146
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.38 E-value=2.6e-12 Score=123.19 Aligned_cols=104 Identities=12% Similarity=0.087 Sum_probs=86.2
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
.+.+|||+|||+|.++..+++. ..+|+|+|+|+.+++.|++++...++ |++++++|+.+.. .+++||.|++
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~--g~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~------~~~~fD~i~~ 190 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLL--GYDVTSWDHNENSIAFLNETKEKENL-NISTALYDINAAN------IQENYDFIVS 190 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCGGGCC------CCSCEEEEEE
T ss_pred CCCcEEEECCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHcCC-ceEEEEecccccc------ccCCccEEEE
Confidence 4689999999999999999998 67999999999999999999998888 9999999998751 2678999998
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEe
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 348 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~t 348 (420)
+.+-.+... -....+++.+.+.|+|||.+++.+
T Consensus 191 ~~~~~~~~~------~~~~~~l~~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 191 TVVFMFLNR------ERVPSIIKNMKEHTNVGGYNLIVA 223 (286)
T ss_dssp CSSGGGSCG------GGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccchhhCCH------HHHHHHHHHHHHhcCCCcEEEEEE
Confidence 743222111 112489999999999999988764
No 147
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.38 E-value=1.6e-12 Score=118.76 Aligned_cols=100 Identities=17% Similarity=0.148 Sum_probs=84.7
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
++.+|||||||+|.++..+++. ..+++|+|+|+.+++.|++++...+++|++++++|+.+... .+++||.|++
T Consensus 77 ~~~~vLdiG~G~G~~~~~la~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-----~~~~~D~i~~ 149 (210)
T 3lbf_A 77 PQSRVLEIGTGSGYQTAILAHL--VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQ-----ARAPFDAIIV 149 (210)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCG-----GGCCEEEEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCc-----cCCCccEEEE
Confidence 4689999999999999999998 68999999999999999999999999999999999987521 3578999999
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCc
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI 350 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~ 350 (420)
...-++. .+.+.+.|||||++++....
T Consensus 150 ~~~~~~~--------------~~~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 150 TAAPPEI--------------PTALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp SSBCSSC--------------CTHHHHTEEEEEEEEEEECS
T ss_pred ccchhhh--------------hHHHHHhcccCcEEEEEEcC
Confidence 7544431 12468899999999998754
No 148
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.38 E-value=3.7e-12 Score=115.92 Aligned_cols=112 Identities=12% Similarity=0.110 Sum_probs=88.3
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
.+.+|||+|||+|.++..+++..+. +++|+|+|+.+++.|+++... ..++.++++|+.++ +..+++||.|++
T Consensus 42 ~~~~vLdiGcG~G~~~~~l~~~~~~-~v~~~D~s~~~~~~a~~~~~~--~~~i~~~~~d~~~~-----~~~~~~fD~v~~ 113 (215)
T 2pxx_A 42 PEDRILVLGCGNSALSYELFLGGFP-NVTSVDYSSVVVAAMQACYAH--VPQLRWETMDVRKL-----DFPSASFDVVLE 113 (215)
T ss_dssp TTCCEEEETCTTCSHHHHHHHTTCC-CEEEEESCHHHHHHHHHHTTT--CTTCEEEECCTTSC-----CSCSSCEEEEEE
T ss_pred CCCeEEEECCCCcHHHHHHHHcCCC-cEEEEeCCHHHHHHHHHhccc--CCCcEEEEcchhcC-----CCCCCcccEEEE
Confidence 4678999999999999999998654 899999999999999998753 45899999999875 224678999987
Q ss_pred eC---------CCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcH
Q 014711 310 QC---------PNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIE 351 (420)
Q Consensus 310 ~f---------pdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~ 351 (420)
+. ++||....++.. ....+++++.++|||||.+++.+-..
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 114 KGTLDALLAGERDPWTVSSEGVH--TVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp ESHHHHHTTTCSCTTSCCHHHHH--HHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred CcchhhhccccccccccccchhH--HHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 53 345544332221 12589999999999999999987543
No 149
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.37 E-value=1.9e-12 Score=120.98 Aligned_cols=123 Identities=16% Similarity=0.177 Sum_probs=93.3
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
++.+|||||||+|.++..+++. +.+++|+|+|+.+++.|+++ +.++++|+.+.+.. + ++++||.|++
T Consensus 41 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~--------~~~~~~d~~~~~~~-~--~~~~fD~i~~ 107 (240)
T 3dli_A 41 GCRRVLDIGCGRGEFLELCKEE--GIESIGVDINEDMIKFCEGK--------FNVVKSDAIEYLKS-L--PDKYLDGVMI 107 (240)
T ss_dssp TCSCEEEETCTTTHHHHHHHHH--TCCEEEECSCHHHHHHHHTT--------SEEECSCHHHHHHT-S--CTTCBSEEEE
T ss_pred CCCeEEEEeCCCCHHHHHHHhC--CCcEEEEECCHHHHHHHHhh--------cceeeccHHHHhhh-c--CCCCeeEEEE
Confidence 3578999999999999999998 56899999999999988765 68999999886422 2 5789999998
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHH------------------HHHHHHHHHHcCCceeEe
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEV------------------MLRMKQQFLEYGKGKLVL 371 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~------------------~~~~~~~l~~~g~~~~~~ 371 (420)
...-.+.... ....+++++.++|||||++++.+.+... .+.+.+.+++.||..+.+
T Consensus 108 ~~~l~~~~~~------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~ 181 (240)
T 3dli_A 108 SHFVEHLDPE------RLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFILEYLGFRDVKI 181 (240)
T ss_dssp ESCGGGSCGG------GHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHHHHTCEEEEE
T ss_pred CCchhhCCcH------HHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHHHHCCCeEEEE
Confidence 7433222111 1148999999999999999998633211 245777888888876544
No 150
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.37 E-value=1.7e-12 Score=118.88 Aligned_cols=106 Identities=13% Similarity=0.102 Sum_probs=84.9
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
.+.+|||||||+|.++..+++.. .+++|+|+|+.+++.|++++... .|++++++|+.++. ++++||.|++
T Consensus 51 ~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~~~~------~~~~fD~v~~ 120 (216)
T 3ofk_A 51 AVSNGLEIGCAAGAFTEKLAPHC--KRLTVIDVMPRAIGRACQRTKRW--SHISWAATDILQFS------TAELFDLIVV 120 (216)
T ss_dssp SEEEEEEECCTTSHHHHHHGGGE--EEEEEEESCHHHHHHHHHHTTTC--SSEEEEECCTTTCC------CSCCEEEEEE
T ss_pred CCCcEEEEcCCCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHhcccC--CCeEEEEcchhhCC------CCCCccEEEE
Confidence 45789999999999999999984 58999999999999999987653 38999999998762 4788999998
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCc
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI 350 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~ 350 (420)
+..-.+..+.. ....+++++.++|||||.+++.+..
T Consensus 121 ~~~l~~~~~~~-----~~~~~l~~~~~~L~pgG~l~~~~~~ 156 (216)
T 3ofk_A 121 AEVLYYLEDMT-----QMRTAIDNMVKMLAPGGHLVFGSAR 156 (216)
T ss_dssp ESCGGGSSSHH-----HHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred ccHHHhCCCHH-----HHHHHHHHHHHHcCCCCEEEEEecC
Confidence 74433322111 1136899999999999999997643
No 151
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.37 E-value=4.4e-12 Score=117.40 Aligned_cols=106 Identities=16% Similarity=0.115 Sum_probs=87.1
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCC-CCeEEEEeCChHHHHHHHHHhHHhCC-CcEEEEEcChhhhhhhhhccCC--CeEe
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRK-DLNFLGLEVNGKLVTHCRDSLQLSGI-TNGYFIATNATSTFRSIVASYP--GKLI 305 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P-~~~viGiDis~~~i~~A~~~~~~~~l-~nv~~~~~Da~~~~~~~~~~~~--~~~d 305 (420)
.+.+|||||||+|.++..+++..| +.+++++|+++.+++.|++++...++ .+++++++|+.+.++.... .. ++||
T Consensus 69 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~-~~~~~~~D 147 (229)
T 2avd_A 69 QAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLA-AGEAGTFD 147 (229)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHH-TTCTTCEE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHh-cCCCCCcc
Confidence 357899999999999999999877 78999999999999999999998887 5799999999876543321 11 6899
Q ss_pred EEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 306 LVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 306 ~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
.|++..+.. ....+++.+.+.|+|||.+++.
T Consensus 148 ~v~~d~~~~-----------~~~~~l~~~~~~L~pgG~lv~~ 178 (229)
T 2avd_A 148 VAVVDADKE-----------NCSAYYERCLQLLRPGGILAVL 178 (229)
T ss_dssp EEEECSCST-----------THHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEECCCHH-----------HHHHHHHHHHHHcCCCeEEEEE
Confidence 998853211 1247899999999999999884
No 152
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.36 E-value=5.1e-12 Score=118.24 Aligned_cols=108 Identities=16% Similarity=0.176 Sum_probs=88.1
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCC-CCeEEEEeCChHHHHHHHHHhHHhCCCc-EEEEEcChhhhhhhhhc---------
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRK-DLNFLGLEVNGKLVTHCRDSLQLSGITN-GYFIATNATSTFRSIVA--------- 298 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P-~~~viGiDis~~~i~~A~~~~~~~~l~n-v~~~~~Da~~~~~~~~~--------- 298 (420)
.+.+|||||||+|.++..+++..| ..+++++|+++.+++.|++++...++.| +.++++|+.+.++....
T Consensus 60 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~ 139 (239)
T 2hnk_A 60 GAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWAS 139 (239)
T ss_dssp TCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGT
T ss_pred CcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccccccc
Confidence 367899999999999999999987 7899999999999999999999888876 99999999876443210
Q ss_pred -cCC--CeEeEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEe
Q 014711 299 -SYP--GKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 348 (420)
Q Consensus 299 -~~~--~~~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~t 348 (420)
+++ ++||.|++.+..+ ..+.+++.+.+.|+|||.+++..
T Consensus 140 ~f~~~~~~fD~I~~~~~~~-----------~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 140 DFAFGPSSIDLFFLDADKE-----------NYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp TTCCSTTCEEEEEECSCGG-----------GHHHHHHHHHHHEEEEEEEEEEC
T ss_pred cccCCCCCcCEEEEeCCHH-----------HHHHHHHHHHHHcCCCeEEEEEc
Confidence 012 7899998863211 12478999999999999999853
No 153
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.36 E-value=3.6e-12 Score=119.57 Aligned_cols=106 Identities=15% Similarity=0.237 Sum_probs=85.2
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
++.+|||+|||+|.++..+++. ..+++|+|+|+.+++.|++++...+. ++.++++|+.++. .++++|.|++
T Consensus 41 ~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~-~v~~~~~d~~~~~------~~~~fD~v~~ 111 (252)
T 1wzn_A 41 EVRRVLDLACGTGIPTLELAER--GYEVVGLDLHEEMLRVARRKAKERNL-KIEFLQGDVLEIA------FKNEFDAVTM 111 (252)
T ss_dssp CCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTC-CCEEEESCGGGCC------CCSCEEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhcCC-ceEEEECChhhcc------cCCCccEEEE
Confidence 4579999999999999999987 67999999999999999999887775 7999999998751 2468999987
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeC
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSD 349 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td 349 (420)
.+....+... -....+++.+.++|+|||.+++.+.
T Consensus 112 ~~~~~~~~~~-----~~~~~~l~~~~~~L~pgG~li~~~~ 146 (252)
T 1wzn_A 112 FFSTIMYFDE-----EDLRKLFSKVAEALKPGGVFITDFP 146 (252)
T ss_dssp CSSGGGGSCH-----HHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCCchhcCCH-----HHHHHHHHHHHHHcCCCeEEEEecc
Confidence 6543321110 1124789999999999999998653
No 154
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.36 E-value=4.9e-12 Score=113.03 Aligned_cols=125 Identities=11% Similarity=0.120 Sum_probs=95.2
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
++.+|||+|||+|.++..+++. ..+++|+|+|+.+++.++++. +|+.++++|+.+. +.+++++|.|++
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~~~~~~~~a~~~~-----~~~~~~~~d~~~~-----~~~~~~~D~i~~ 113 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQ--GHDVLGTDLDPILIDYAKQDF-----PEARWVVGDLSVD-----QISETDFDLIVS 113 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHC-----TTSEEEECCTTTS-----CCCCCCEEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHHC--CCcEEEEcCCHHHHHHHHHhC-----CCCcEEEcccccC-----CCCCCceeEEEE
Confidence 4689999999999999999988 679999999999999998875 4689999999875 124678999988
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHH--HHHHHHHHHHHcCCceeEe
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEE--VMLRMKQQFLEYGKGKLVL 371 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~--~~~~~~~~l~~~g~~~~~~ 371 (420)
+.+--++.. .-....+++.+.+.|+|||.+++.+.... ..+.+.+.+++.|+.....
T Consensus 114 ~~~~~~~~~-----~~~~~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 172 (195)
T 3cgg_A 114 AGNVMGFLA-----EDGREPALANIHRALGADGRAVIGFGAGRGWVFGDFLEVAERVGLELENA 172 (195)
T ss_dssp CCCCGGGSC-----HHHHHHHHHHHHHHEEEEEEEEEEEETTSSCCHHHHHHHHHHHTEEEEEE
T ss_pred CCcHHhhcC-----hHHHHHHHHHHHHHhCCCCEEEEEeCCCCCcCHHHHHHHHHHcCCEEeee
Confidence 522111111 00124799999999999999999764322 2456788889999876554
No 155
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.36 E-value=2.7e-12 Score=117.29 Aligned_cols=102 Identities=13% Similarity=0.077 Sum_probs=82.9
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
.+.+|||||||+|.++..+++. ..+++|+|+|+.+++.|++ .+..|+.++++|+.++ + ++++||.|++
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~s~~~~~~a~~----~~~~~~~~~~~d~~~~----~--~~~~~D~v~~ 113 (218)
T 3ou2_A 46 IRGDVLELASGTGYWTRHLSGL--ADRVTALDGSAEMIAEAGR----HGLDNVEFRQQDLFDW----T--PDRQWDAVFF 113 (218)
T ss_dssp SCSEEEEESCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHGG----GCCTTEEEEECCTTSC----C--CSSCEEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHh----cCCCCeEEEecccccC----C--CCCceeEEEE
Confidence 3569999999999999999998 6799999999999999977 5667899999999775 2 5789999998
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeC
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSD 349 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td 349 (420)
...-.+... -....+++++.++|||||.+++.+.
T Consensus 114 ~~~l~~~~~------~~~~~~l~~~~~~L~pgG~l~~~~~ 147 (218)
T 3ou2_A 114 AHWLAHVPD------DRFEAFWESVRSAVAPGGVVEFVDV 147 (218)
T ss_dssp ESCGGGSCH------HHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred echhhcCCH------HHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 743222111 0114799999999999999999753
No 156
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.36 E-value=5.9e-12 Score=122.64 Aligned_cols=104 Identities=15% Similarity=0.214 Sum_probs=85.2
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCC-cEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGIT-NGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~-nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
++.+|||||||+|.++..+++.+ +.+++|+|+|+.+++.|++++...++. ++.++++|+.++ +++||.|+
T Consensus 90 ~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--------~~~fD~v~ 160 (318)
T 2fk8_A 90 PGMTLLDIGCGWGTTMRRAVERF-DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDF--------AEPVDRIV 160 (318)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGC--------CCCCSEEE
T ss_pred CcCEEEEEcccchHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHC--------CCCcCEEE
Confidence 46799999999999999999987 569999999999999999999888875 599999999764 36899998
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEe
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 348 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~t 348 (420)
+...-.+.... ....+++++.++|||||++++.+
T Consensus 161 ~~~~l~~~~~~------~~~~~l~~~~~~LkpgG~l~~~~ 194 (318)
T 2fk8_A 161 SIEAFEHFGHE------NYDDFFKRCFNIMPADGRMTVQS 194 (318)
T ss_dssp EESCGGGTCGG------GHHHHHHHHHHHSCTTCEEEEEE
T ss_pred EeChHHhcCHH------HHHHHHHHHHHhcCCCcEEEEEE
Confidence 87432221111 11489999999999999999864
No 157
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.35 E-value=2.1e-12 Score=117.44 Aligned_cols=106 Identities=10% Similarity=0.096 Sum_probs=82.3
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
.+.+|||+|||+|.++..++.. +..+++|+|+|+.+++.|++++...+ .++.++++|+.++ +.++++||.|++
T Consensus 23 ~~~~vLDiGcG~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~~~-----~~~~~~fD~v~~ 95 (209)
T 2p8j_A 23 LDKTVLDCGAGGDLPPLSIFVE-DGYKTYGIEISDLQLKKAENFSRENN-FKLNISKGDIRKL-----PFKDESMSFVYS 95 (209)
T ss_dssp SCSEEEEESCCSSSCTHHHHHH-TTCEEEEEECCHHHHHHHHHHHHHHT-CCCCEEECCTTSC-----CSCTTCEEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHh-CCCEEEEEECCHHHHHHHHHHHHhcC-CceEEEECchhhC-----CCCCCceeEEEE
Confidence 3679999999999986655544 56899999999999999999988766 4799999999875 224678999988
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEe
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 348 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~t 348 (420)
...-.+.. .-....+++++.++|||||.+++.+
T Consensus 96 ~~~l~~~~------~~~~~~~l~~~~~~LkpgG~l~~~~ 128 (209)
T 2p8j_A 96 YGTIFHMR------KNDVKEAIDEIKRVLKPGGLACINF 128 (209)
T ss_dssp CSCGGGSC------HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cChHHhCC------HHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 63222110 0112479999999999999999875
No 158
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.35 E-value=6.2e-12 Score=117.47 Aligned_cols=106 Identities=17% Similarity=0.162 Sum_probs=87.4
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCC-CCeEEEEeCChHHHHHHHHHhHHhCCC-cEEEEEcChhhhhhhhhccCC--CeEe
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRK-DLNFLGLEVNGKLVTHCRDSLQLSGIT-NGYFIATNATSTFRSIVASYP--GKLI 305 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P-~~~viGiDis~~~i~~A~~~~~~~~l~-nv~~~~~Da~~~~~~~~~~~~--~~~d 305 (420)
.+.+|||||||+|.++..+|+..| +.+++++|+++.+++.|++++.+.++. +++++++|+.+.++... ..+ ++||
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~-~~~~~~~fD 150 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLT-QGKPLPEFD 150 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHH-TSSSCCCEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHH-hcCCCCCcC
Confidence 357899999999999999999987 789999999999999999999988885 59999999987654332 123 7899
Q ss_pred EEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 306 LVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 306 ~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
.|++..+.+ ....+++.+.+.|+|||.+++.
T Consensus 151 ~V~~d~~~~-----------~~~~~l~~~~~~LkpgG~lv~~ 181 (232)
T 3cbg_A 151 LIFIDADKR-----------NYPRYYEIGLNLLRRGGLMVID 181 (232)
T ss_dssp EEEECSCGG-----------GHHHHHHHHHHTEEEEEEEEEE
T ss_pred EEEECCCHH-----------HHHHHHHHHHHHcCCCeEEEEe
Confidence 998753211 1247899999999999999984
No 159
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.35 E-value=7e-12 Score=113.61 Aligned_cols=100 Identities=11% Similarity=0.070 Sum_probs=83.1
Q ss_pred EEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEEeCC
Q 014711 233 LVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCP 312 (420)
Q Consensus 233 ~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~~fp 312 (420)
+|||||||+|.++..+++. ..+++|+|+|+.+++.|++++...+. ++.++++|+.++ +.++++||.|++.+.
T Consensus 32 ~vLdiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~-----~~~~~~fD~v~~~~~ 103 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASL--GYEVTAVDQSSVGLAKAKQLAQEKGV-KITTVQSNLADF-----DIVADAWEGIVSIFC 103 (202)
T ss_dssp EEEECCCSCTHHHHHHHTT--TCEEEEECSSHHHHHHHHHHHHHHTC-CEEEECCBTTTB-----SCCTTTCSEEEEECC
T ss_pred CEEEECCCCCHhHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCC-ceEEEEcChhhc-----CCCcCCccEEEEEhh
Confidence 9999999999999999987 57999999999999999999888776 899999999875 124678999988642
Q ss_pred CCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEe
Q 014711 313 NPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 348 (420)
Q Consensus 313 dp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~t 348 (420)
+. +.. ....+++.+.++|||||.+++.+
T Consensus 104 --~~---~~~---~~~~~l~~~~~~L~pgG~l~~~~ 131 (202)
T 2kw5_A 104 --HL---PSS---LRQQLYPKVYQGLKPGGVFILEG 131 (202)
T ss_dssp --CC---CHH---HHHHHHHHHHTTCCSSEEEEEEE
T ss_pred --cC---CHH---HHHHHHHHHHHhcCCCcEEEEEE
Confidence 11 111 12479999999999999999975
No 160
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.35 E-value=7.4e-12 Score=114.75 Aligned_cols=102 Identities=21% Similarity=0.297 Sum_probs=80.2
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
.+.+|||||||+|.++..+++. ..+++|+|+|+.+++.|+++ .++.+.+.|+.++....+. .+.+||.|++
T Consensus 52 ~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~~~~~-~~~~fD~v~~ 122 (227)
T 3e8s_A 52 QPERVLDLGCGEGWLLRALADR--GIEAVGVDGDRTLVDAARAA------GAGEVHLASYAQLAEAKVP-VGKDYDLICA 122 (227)
T ss_dssp CCSEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHT------CSSCEEECCHHHHHTTCSC-CCCCEEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHC--CCEEEEEcCCHHHHHHHHHh------cccccchhhHHhhcccccc-cCCCccEEEE
Confidence 3588999999999999999988 67999999999999999876 4678899999886322121 3456999988
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeC
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSD 349 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td 349 (420)
.+.-.+ . .. ..+++.+.++|||||++++.+.
T Consensus 123 ~~~l~~-~--~~------~~~l~~~~~~L~pgG~l~~~~~ 153 (227)
T 3e8s_A 123 NFALLH-Q--DI------IELLSAMRTLLVPGGALVIQTL 153 (227)
T ss_dssp ESCCCS-S--CC------HHHHHHHHHTEEEEEEEEEEEC
T ss_pred Cchhhh-h--hH------HHHHHHHHHHhCCCeEEEEEec
Confidence 743221 1 11 3799999999999999999764
No 161
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.34 E-value=3.7e-12 Score=116.70 Aligned_cols=102 Identities=19% Similarity=0.204 Sum_probs=85.4
Q ss_pred CCCEEEEEcCCccHHHHHHHHhC-CCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKR-KDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~-P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
.+.+|||||||+|.++..+++.. |+.+++|+|+|+.+++.|++++...+++|+.+.++|+...++ .+++||.|+
T Consensus 77 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-----~~~~fD~v~ 151 (215)
T 2yxe_A 77 PGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYE-----PLAPYDRIY 151 (215)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCG-----GGCCEEEEE
T ss_pred CCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCC-----CCCCeeEEE
Confidence 46799999999999999999987 778999999999999999999998898899999999854321 256899999
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCc
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI 350 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~ 350 (420)
+..+-++ +.+.+.+.|||||++++.+..
T Consensus 152 ~~~~~~~--------------~~~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 152 TTAAGPK--------------IPEPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp ESSBBSS--------------CCHHHHHTEEEEEEEEEEESS
T ss_pred ECCchHH--------------HHHHHHHHcCCCcEEEEEECC
Confidence 8754443 124678999999999998754
No 162
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.33 E-value=7.7e-13 Score=124.72 Aligned_cols=115 Identities=14% Similarity=0.067 Sum_probs=84.9
Q ss_pred CCCEEEEEcCCccHHHHHHHHh--CCCCeEEEEeCChHHHHHHHHHhHHh---CCCc-----------------------
Q 014711 230 AQPLVVDIGSGNGLFLLGMARK--RKDLNFLGLEVNGKLVTHCRDSLQLS---GITN----------------------- 281 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~--~P~~~viGiDis~~~i~~A~~~~~~~---~l~n----------------------- 281 (420)
.+.+|||+|||+|.+++.+++. .|..+++|+|+|+.+++.|++++... ++++
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 3578999999999999999998 78889999999999999999988765 4432
Q ss_pred ---EE-------------EEEcChhhhhhhh-hccCCCeEeEEEEeCCCCCCCCcchh---hhhhHHHHHHHHHhhccCC
Q 014711 282 ---GY-------------FIATNATSTFRSI-VASYPGKLILVSIQCPNPDFNRPEHR---WRMVQRSLVEAVSDLLVHD 341 (420)
Q Consensus 282 ---v~-------------~~~~Da~~~~~~~-~~~~~~~~d~i~~~fpdp~~k~~~~k---~Rl~~~~~l~~i~~~Lkpg 341 (420)
++ |+++|+.+..... +. ...+||.|+++. |+....+.. ..-....+++.+.++|+||
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~-~~~~fD~Iv~np--p~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg 207 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADVFDPRALSAVL-AGSAPDVVLTDL--PYGERTHWEGQVPGQPVAGLLRSLASALPAH 207 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHH-TTCCCSEEEEEC--CGGGSSSSSSCCCHHHHHHHHHHHHHHSCTT
T ss_pred hhhhhhhccccccccccceeeccccccccccccc-CCCCceEEEeCC--CeeccccccccccccHHHHHHHHHHHhcCCC
Confidence 66 9999987752100 00 234799999873 332111110 0122358999999999999
Q ss_pred eEEEEE
Q 014711 342 GKVFLQ 347 (420)
Q Consensus 342 G~l~~~ 347 (420)
|++++.
T Consensus 208 G~l~~~ 213 (250)
T 1o9g_A 208 AVIAVT 213 (250)
T ss_dssp CEEEEE
T ss_pred cEEEEe
Confidence 999994
No 163
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.33 E-value=3.3e-12 Score=122.68 Aligned_cols=119 Identities=8% Similarity=0.052 Sum_probs=87.8
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhC----CCcEEEEEcChhhhhhhhhccCCCeEe
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSG----ITNGYFIATNATSTFRSIVASYPGKLI 305 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~----l~nv~~~~~Da~~~~~~~~~~~~~~~d 305 (420)
.+.+|||||||+|.++..+++. ..+|+|+|+|+.+++.|++++...+ ..++.+.++|+..+..+++ .+++||
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~--~~~~fD 132 (293)
T 3thr_A 57 GCHRVLDVACGTGVDSIMLVEE--GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVP--AGDGFD 132 (293)
T ss_dssp TCCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSC--CTTCEE
T ss_pred CCCEEEEecCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccc--cCCCeE
Confidence 4678999999999999999998 4599999999999999999875443 2468999999988732333 578999
Q ss_pred EEEEe-CCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHH
Q 014711 306 LVSIQ-CPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEV 353 (420)
Q Consensus 306 ~i~~~-fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~ 353 (420)
.|++. ..-.+...... ..-....++++++++|||||+|++.+.+..+
T Consensus 133 ~V~~~g~~l~~~~~~~~-~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 180 (293)
T 3thr_A 133 AVICLGNSFAHLPDSKG-DQSEHRLALKNIASMVRPGGLLVIDHRNYDY 180 (293)
T ss_dssp EEEECTTCGGGSCCSSS-SSHHHHHHHHHHHHTEEEEEEEEEEEECHHH
T ss_pred EEEEcChHHhhcCcccc-CHHHHHHHHHHHHHHcCCCeEEEEEeCCHHH
Confidence 99885 22211111000 0001248999999999999999998765443
No 164
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.32 E-value=7.8e-12 Score=120.59 Aligned_cols=110 Identities=11% Similarity=0.099 Sum_probs=80.3
Q ss_pred CCEEEEEcCCccHHHH----HHHHhCCCCeE--EEEeCChHHHHHHHHHhHHh-CCCcEEE--EEcChhhhhhhh-hccC
Q 014711 231 QPLVVDIGSGNGLFLL----GMARKRKDLNF--LGLEVNGKLVTHCRDSLQLS-GITNGYF--IATNATSTFRSI-VASY 300 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~----~lA~~~P~~~v--iGiDis~~~i~~A~~~~~~~-~l~nv~~--~~~Da~~~~~~~-~~~~ 300 (420)
+.+|||||||+|.++. .++.++|+..+ +|+|.|+.|++.|++++... +++|+.+ .++++.++...+ .++.
T Consensus 53 ~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 132 (292)
T 2aot_A 53 EIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEKKE 132 (292)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTTTC
T ss_pred CCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccccC
Confidence 5689999999998654 44556688854 99999999999999998653 5677654 566776542111 0124
Q ss_pred CCeEeEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEe
Q 014711 301 PGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 348 (420)
Q Consensus 301 ~~~~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~t 348 (420)
+++||.|++.+.-.|..+. ..+|++++++|||||+|++..
T Consensus 133 ~~~fD~V~~~~~l~~~~d~--------~~~l~~~~r~LkpgG~l~i~~ 172 (292)
T 2aot_A 133 LQKWDFIHMIQMLYYVKDI--------PATLKFFHSLLGTNAKMLIIV 172 (292)
T ss_dssp CCCEEEEEEESCGGGCSCH--------HHHHHHHHHTEEEEEEEEEEE
T ss_pred CCceeEEEEeeeeeecCCH--------HHHHHHHHHHcCCCcEEEEEE
Confidence 7889999988544443221 379999999999999999864
No 165
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.32 E-value=2.3e-11 Score=122.79 Aligned_cols=135 Identities=12% Similarity=0.114 Sum_probs=99.6
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCC-C-cEEEEEcChhhhhhhhhccCCCeEeEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGI-T-NGYFIATNATSTFRSIVASYPGKLILV 307 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l-~-nv~~~~~Da~~~~~~~~~~~~~~~d~i 307 (420)
.+.+|||+|||+|.+++.+|+.. ..+|+|+|+|+.+++.|++++..+++ + |++|+++|+.+.++.... ...+||.|
T Consensus 220 ~~~~VLDl~cG~G~~sl~la~~g-~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~-~~~~fD~I 297 (396)
T 3c0k_A 220 ENKRVLNCFSYTGGFAVSALMGG-CSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRD-RGEKFDVI 297 (396)
T ss_dssp TTCEEEEESCTTCSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHH-TTCCEEEE
T ss_pred CCCeEEEeeccCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHh-cCCCCCEE
Confidence 46899999999999999999874 46899999999999999999999998 7 899999999987543221 24689999
Q ss_pred EEeCCCCCCCC-cchhh--hhhHHHHHHHHHhhccCCeEEEEEeCcH-----HHHHHHHHHHHHcCCce
Q 014711 308 SIQCPNPDFNR-PEHRW--RMVQRSLVEAVSDLLVHDGKVFLQSDIE-----EVMLRMKQQFLEYGKGK 368 (420)
Q Consensus 308 ~~~fpdp~~k~-~~~k~--Rl~~~~~l~~i~~~LkpgG~l~~~td~~-----~~~~~~~~~l~~~g~~~ 368 (420)
++.- |.+.. ..... .-...+++..+.+.|+|||.+++.+... .+.+.+.+.+.+.|...
T Consensus 298 i~dp--P~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~ 364 (396)
T 3c0k_A 298 VMDP--PKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDAGRDV 364 (396)
T ss_dssp EECC--SSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCE
T ss_pred EECC--CCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCeE
Confidence 8862 32211 10000 0122578999999999999999987542 23333445677777544
No 166
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.32 E-value=1.3e-11 Score=121.73 Aligned_cols=113 Identities=12% Similarity=0.112 Sum_probs=85.8
Q ss_pred CCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCc--EEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITN--GYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~n--v~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
+.+|||+|||+|.+++.+|+.. .+|+|+|+|+.+++.|++++..+++.| ++++++|+.+++..... ...+||.|+
T Consensus 154 ~~~VLDlgcGtG~~sl~la~~g--a~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~-~~~~fD~Ii 230 (332)
T 2igt_A 154 PLKVLNLFGYTGVASLVAAAAG--AEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREER-RGSTYDIIL 230 (332)
T ss_dssp CCEEEEETCTTCHHHHHHHHTT--CEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHH-HTCCBSEEE
T ss_pred CCcEEEcccccCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHh-cCCCceEEE
Confidence 5789999999999999999873 499999999999999999999999875 99999999987532210 146899998
Q ss_pred EeCCCCCCCCc----chhhhhhHHHHHHHHHhhccCCeEEEEEe
Q 014711 309 IQCPNPDFNRP----EHRWRMVQRSLVEAVSDLLVHDGKVFLQS 348 (420)
Q Consensus 309 ~~fpdp~~k~~----~~k~Rl~~~~~l~~i~~~LkpgG~l~~~t 348 (420)
++- |.+... .....-....+++.+.++|+|||.|++.+
T Consensus 231 ~dP--P~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~ 272 (332)
T 2igt_A 231 TDP--PKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLT 272 (332)
T ss_dssp ECC--CSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEE
T ss_pred ECC--ccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEE
Confidence 852 211110 00000112588999999999999977754
No 167
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.32 E-value=2e-11 Score=122.30 Aligned_cols=128 Identities=16% Similarity=0.171 Sum_probs=96.3
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCC-CcEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGI-TNGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l-~nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
.+..|||+|||+|.+++.+|+..+..+++|+|+|+.+++.|++++...|+ .+++|.++|+.++. .+++++|.|+
T Consensus 217 ~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~-----~~~~~fD~Ii 291 (373)
T 3tm4_A 217 DGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLS-----QYVDSVDFAI 291 (373)
T ss_dssp CSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGG-----GTCSCEEEEE
T ss_pred CCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCC-----cccCCcCEEE
Confidence 46789999999999999999998777999999999999999999999998 58999999998862 1467899999
Q ss_pred EeCCCCCCCCc--chhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHHHHHHHHHHHHcCCcee
Q 014711 309 IQCPNPDFNRP--EHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGKL 369 (420)
Q Consensus 309 ~~fpdp~~k~~--~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~~~~~~~~l~~~g~~~~ 369 (420)
++ .|+.... .....-+++++++.+.++| +|.+++.+..... +.+.+.+.|+...
T Consensus 292 ~n--pPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~~~~~---~~~~~~~~G~~~~ 347 (373)
T 3tm4_A 292 SN--LPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITTEKKA---IEEAIAENGFEII 347 (373)
T ss_dssp EE--CCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEESCHHH---HHHHHHHTTEEEE
T ss_pred EC--CCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEECCHHH---HHHHHHHcCCEEE
Confidence 98 4443221 1111223468999999999 5555555544443 4456777787653
No 168
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.32 E-value=9.1e-12 Score=116.41 Aligned_cols=107 Identities=12% Similarity=0.089 Sum_probs=81.6
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhh-hhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRS-IVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~-~~~~~~~~~d~i~ 308 (420)
.+.+|||||||+|.++..+++..+ +|+|+|+|+.+++.|++++ ...|++++++|+.+.... .++ ....+|.|+
T Consensus 56 ~~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~---~~~~~~~~~~d~~~~~~~~~~~-~~~~~d~v~ 129 (245)
T 3ggd_A 56 PELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKEN---TAANISYRLLDGLVPEQAAQIH-SEIGDANIY 129 (245)
T ss_dssp TTSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHS---CCTTEEEEECCTTCHHHHHHHH-HHHCSCEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhC---cccCceEEECcccccccccccc-cccCccEEE
Confidence 357899999999999999999976 8999999999999999986 335899999999886311 110 113488998
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEe
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 348 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~t 348 (420)
+...-.+..... ...+++++.++|||||++++..
T Consensus 130 ~~~~~~~~~~~~------~~~~l~~~~~~LkpgG~l~i~~ 163 (245)
T 3ggd_A 130 MRTGFHHIPVEK------RELLGQSLRILLGKQGAMYLIE 163 (245)
T ss_dssp EESSSTTSCGGG------HHHHHHHHHHHHTTTCEEEEEE
T ss_pred EcchhhcCCHHH------HHHHHHHHHHHcCCCCEEEEEe
Confidence 875444322111 1489999999999999977753
No 169
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.32 E-value=2.1e-11 Score=122.67 Aligned_cols=134 Identities=11% Similarity=0.132 Sum_probs=96.8
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCC--cEEEEEcChhhhhhhhhccCCCeEeEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGIT--NGYFIATNATSTFRSIVASYPGKLILV 307 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~--nv~~~~~Da~~~~~~~~~~~~~~~d~i 307 (420)
.+.+|||+|||+|.+++.+|+.. ...|+|+|+|+.+++.|++|+..++++ |++|+++|+.+.++.... ...+||.|
T Consensus 212 ~~~~VLDl~cGtG~~sl~la~~g-a~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~-~~~~fD~I 289 (385)
T 2b78_A 212 AGKTVLNLFSYTAAFSVAAAMGG-AMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARR-HHLTYDII 289 (385)
T ss_dssp BTCEEEEETCTTTHHHHHHHHTT-BSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHH-TTCCEEEE
T ss_pred CCCeEEEEeeccCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHH-hCCCccEE
Confidence 46799999999999999999862 348999999999999999999999987 899999999987543321 24589999
Q ss_pred EEeCCCCCCCC---cchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHH-----HHHHHHHHHHHcCCc
Q 014711 308 SIQCPNPDFNR---PEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEE-----VMLRMKQQFLEYGKG 367 (420)
Q Consensus 308 ~~~fpdp~~k~---~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~-----~~~~~~~~l~~~g~~ 367 (420)
++. .|.+.. ......-...++++.+.+.|+|||.+++.+.... +.+.+.+.+...+..
T Consensus 290 i~D--PP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~ 355 (385)
T 2b78_A 290 IID--PPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANMTVSQFKKQIEKGFGKQKHT 355 (385)
T ss_dssp EEC--CCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHTTCCCE
T ss_pred EEC--CCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCc
Confidence 885 233211 1111111124688899999999999999875432 233334445555554
No 170
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.32 E-value=1.5e-11 Score=126.11 Aligned_cols=132 Identities=14% Similarity=0.123 Sum_probs=99.4
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCC-CCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRK-DLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P-~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
++.+|||+|||+|..++.+|+..+ ...++++|+|+.+++.+++++++.|+.|+.++++|+..+. ..+ +++||.|+
T Consensus 105 ~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~-~~~---~~~FD~Il 180 (456)
T 3m4x_A 105 PGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELV-PHF---SGFFDRIV 180 (456)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHH-HHH---TTCEEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhh-hhc---cccCCEEE
Confidence 468999999999999999999865 4799999999999999999999999999999999998873 222 57899999
Q ss_pred EeCCCCCCC----Ccchhh------------hhhHHHHHHHHHhhccCCeEEEEEeCc---HHHHHHHHHHHHHcCCc
Q 014711 309 IQCPNPDFN----RPEHRW------------RMVQRSLVEAVSDLLVHDGKVFLQSDI---EEVMLRMKQQFLEYGKG 367 (420)
Q Consensus 309 ~~fpdp~~k----~~~~k~------------Rl~~~~~l~~i~~~LkpgG~l~~~td~---~~~~~~~~~~l~~~g~~ 367 (420)
+.- |+.- .+++.. .-++.++|+.+.+.|||||+|+..|.. +.--+.+...++++++.
T Consensus 181 ~Da--PCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~eEne~vv~~~l~~~~~~ 256 (456)
T 3m4x_A 181 VDA--PCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAPEENEEIISWLVENYPVT 256 (456)
T ss_dssp EEC--CCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCGGGTHHHHHHHHHHSSEE
T ss_pred ECC--CCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecccccCHHHHHHHHHhCCCE
Confidence 873 3211 111111 113468999999999999999987742 11122344556777743
No 171
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.32 E-value=3e-11 Score=121.87 Aligned_cols=133 Identities=16% Similarity=0.141 Sum_probs=97.4
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCC-cEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGIT-NGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~-nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
.+.+|||+|||+|.+++.+|+. +..+++|+|+|+.+++.|++++..++++ |++|+++|+.+.++.+.. ...+||.|+
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~-g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~-~~~~fD~Vi 294 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQK-KGEKFDIVV 294 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHH-TTCCEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHh-hCCCCCEEE
Confidence 4689999999999999999987 4568999999999999999999999987 899999999887543221 256899998
Q ss_pred EeCCCCCCCC-cchhhh--hhHHHHHHHHHhhccCCeEEEEEeCcH-----HHHHHHHHHHHHcCC
Q 014711 309 IQCPNPDFNR-PEHRWR--MVQRSLVEAVSDLLVHDGKVFLQSDIE-----EVMLRMKQQFLEYGK 366 (420)
Q Consensus 309 ~~fpdp~~k~-~~~k~R--l~~~~~l~~i~~~LkpgG~l~~~td~~-----~~~~~~~~~l~~~g~ 366 (420)
++ .|.+.. ...... -...+++..+.+.|+|||.+++.+... .+.+.+.+.+...+.
T Consensus 295 ~d--pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~v~~~~~~~~~ 358 (396)
T 2as0_A 295 LD--PPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQHVDLQMFKDMIIAAGAKAGK 358 (396)
T ss_dssp EC--CCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTTE
T ss_pred EC--CCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCCCCHHHHHHHHHHHHHHcCC
Confidence 85 232221 111111 123578999999999999999887542 223334445555553
No 172
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.32 E-value=6e-12 Score=113.81 Aligned_cols=101 Identities=13% Similarity=0.096 Sum_probs=80.6
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCC-cEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGIT-NGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~-nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
....|||+|||+|.+++.++...|+.+|+|+|+|+.|++.+++++...|.. |+++ .|..... +++++|.|.
T Consensus 49 ~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~~------~~~~~DvVL 120 (200)
T 3fzg_A 49 HVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESDV------YKGTYDVVF 120 (200)
T ss_dssp CCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHHH------TTSEEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccccC------CCCCcChhh
Confidence 367899999999999999999999999999999999999999999999988 6887 5554431 478999998
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEE
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFL 346 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~ 346 (420)
.+- --|.- +-. +..+..+.+.|+|||.|+-
T Consensus 121 a~k------~LHlL-~~~-~~al~~v~~~L~pggvfIS 150 (200)
T 3fzg_A 121 LLK------MLPVL-KQQ-DVNILDFLQLFHTQNFVIS 150 (200)
T ss_dssp EET------CHHHH-HHT-TCCHHHHHHTCEEEEEEEE
T ss_pred Hhh------HHHhh-hhh-HHHHHHHHHHhCCCCEEEE
Confidence 872 22221 101 2345589999999998864
No 173
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.31 E-value=5.6e-12 Score=116.59 Aligned_cols=105 Identities=25% Similarity=0.332 Sum_probs=85.2
Q ss_pred CCCEEEEEcCCccHHHHHHHHhC-----CCCeEEEEeCChHHHHHHHHHhHHhC-----CCcEEEEEcChhhhhhhhhcc
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKR-----KDLNFLGLEVNGKLVTHCRDSLQLSG-----ITNGYFIATNATSTFRSIVAS 299 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~-----P~~~viGiDis~~~i~~A~~~~~~~~-----l~nv~~~~~Da~~~~~~~~~~ 299 (420)
++.+|||||||+|.++..+++.. |+.+++|+|+++.+++.|++++...+ ..|+.++++|+.+..+....
T Consensus 80 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~- 158 (227)
T 2pbf_A 80 PGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKK- 158 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHH-
T ss_pred CCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCc-
Confidence 36799999999999999999985 67899999999999999999998887 67899999999875211000
Q ss_pred CCCeEeEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeC
Q 014711 300 YPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSD 349 (420)
Q Consensus 300 ~~~~~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td 349 (420)
..++||.|++..+-++ +++.+.+.|||||++++.+.
T Consensus 159 ~~~~fD~I~~~~~~~~--------------~~~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 159 ELGLFDAIHVGASASE--------------LPEILVDLLAENGKLIIPIE 194 (227)
T ss_dssp HHCCEEEEEECSBBSS--------------CCHHHHHHEEEEEEEEEEEE
T ss_pred cCCCcCEEEECCchHH--------------HHHHHHHhcCCCcEEEEEEc
Confidence 2467999988754332 45778899999999999764
No 174
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.31 E-value=9.1e-12 Score=115.77 Aligned_cols=108 Identities=15% Similarity=0.258 Sum_probs=85.2
Q ss_pred CCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEEe
Q 014711 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQ 310 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~~ 310 (420)
+.+|||+|||+|.++..+++. .+++|+|+|+.+++.|++++...+ .++.++++|+.++ + .++++|.|++.
T Consensus 34 ~~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~~~-----~-~~~~fD~v~~~ 103 (243)
T 3d2l_A 34 GKRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQEKAMETN-RHVDFWVQDMREL-----E-LPEPVDAITIL 103 (243)
T ss_dssp TCEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHHHHHHHTT-CCCEEEECCGGGC-----C-CSSCEEEEEEC
T ss_pred CCeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHHHhhhhcC-CceEEEEcChhhc-----C-CCCCcCEEEEe
Confidence 578999999999999999887 799999999999999999987766 5799999999875 1 24789999886
Q ss_pred C-CCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHH
Q 014711 311 C-PNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEV 353 (420)
Q Consensus 311 f-pdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~ 353 (420)
+ .-.+.... -....+++++.++|||||.+++.+.....
T Consensus 104 ~~~~~~~~~~-----~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 142 (243)
T 3d2l_A 104 CDSLNYLQTE-----ADVKQTFDSAARLLTDGGKLLFDVHSPYK 142 (243)
T ss_dssp TTGGGGCCSH-----HHHHHHHHHHHHHEEEEEEEEEEEECHHH
T ss_pred CCchhhcCCH-----HHHHHHHHHHHHhcCCCeEEEEEcCCHHH
Confidence 3 21221110 11247899999999999999997765443
No 175
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.31 E-value=1.4e-11 Score=122.65 Aligned_cols=105 Identities=16% Similarity=0.196 Sum_probs=84.6
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCC-cEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGIT-NGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~-nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
.+.+|||||||+|.++..+++.+|+.+++++|+ +.+++.|++++...++. +++|+++|+.+. + +..+|.|+
T Consensus 182 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~---~~~~D~v~ 253 (374)
T 1qzz_A 182 AVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKP----L---PVTADVVL 253 (374)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSC----C---SCCEEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCc----C---CCCCCEEE
Confidence 468999999999999999999999999999999 99999999999888876 799999999753 2 23499998
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEe
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 348 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~t 348 (420)
+...-.++.+ .....+++++.++|+|||++++..
T Consensus 254 ~~~vl~~~~~------~~~~~~l~~~~~~L~pgG~l~i~e 287 (374)
T 1qzz_A 254 LSFVLLNWSD------EDALTILRGCVRALEPGGRLLVLD 287 (374)
T ss_dssp EESCGGGSCH------HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EeccccCCCH------HHHHHHHHHHHHhcCCCcEEEEEe
Confidence 8632211100 011379999999999999988753
No 176
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.31 E-value=4.4e-12 Score=119.95 Aligned_cols=100 Identities=14% Similarity=0.208 Sum_probs=79.7
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
++.+|||||||+|.++..+++.. .+++|+|+|+.+++.|+++.. ++.++++|+.++ + .+++||.|++
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~-----~~~~~~~d~~~~-----~-~~~~fD~v~~ 116 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLADSF--GTVEGLELSADMLAIARRRNP-----DAVLHHGDMRDF-----S-LGRRFSAVTC 116 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHTTTS--SEEEEEESCHHHHHHHHHHCT-----TSEEEECCTTTC-----C-CSCCEEEEEE
T ss_pred CCCcEEEeCCcCCHHHHHHHHcC--CeEEEEECCHHHHHHHHhhCC-----CCEEEECChHHC-----C-ccCCcCEEEE
Confidence 46799999999999999999884 589999999999999988753 789999999875 1 2678999998
Q ss_pred eC-CCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 310 QC-PNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 310 ~f-pdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
.+ .-.+... + -....+++.+.++|||||.|++.
T Consensus 117 ~~~~l~~~~~--~---~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 117 MFSSIGHLAG--Q---AELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp CTTGGGGSCH--H---HHHHHHHHHHHHTEEEEEEEEEC
T ss_pred cCchhhhcCC--H---HHHHHHHHHHHHhcCCCcEEEEE
Confidence 74 2222111 0 01147899999999999999995
No 177
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.31 E-value=5.9e-12 Score=116.37 Aligned_cols=101 Identities=16% Similarity=0.263 Sum_probs=83.5
Q ss_pred CCCEEEEEcCCccHHHHHHHHhC-CCCeEEEEeCChHHHHHHHHHhHHhC-----CCcEEEEEcChhhhhhhhhccCCCe
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKR-KDLNFLGLEVNGKLVTHCRDSLQLSG-----ITNGYFIATNATSTFRSIVASYPGK 303 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~-P~~~viGiDis~~~i~~A~~~~~~~~-----l~nv~~~~~Da~~~~~~~~~~~~~~ 303 (420)
++.+|||||||+|.++..+++.. |..+|+|+|+|+.+++.|++++...+ ..|+.++++|+.... . .+++
T Consensus 77 ~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~---~--~~~~ 151 (226)
T 1i1n_A 77 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGY---A--EEAP 151 (226)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCC---G--GGCC
T ss_pred CCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCc---c--cCCC
Confidence 46799999999999999999884 67899999999999999999988765 468999999997542 1 2567
Q ss_pred EeEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeC
Q 014711 304 LILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSD 349 (420)
Q Consensus 304 ~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td 349 (420)
||.|++..+-+ .+++.+.+.|||||++++.+.
T Consensus 152 fD~i~~~~~~~--------------~~~~~~~~~LkpgG~lv~~~~ 183 (226)
T 1i1n_A 152 YDAIHVGAAAP--------------VVPQALIDQLKPGGRLILPVG 183 (226)
T ss_dssp EEEEEECSBBS--------------SCCHHHHHTEEEEEEEEEEES
T ss_pred cCEEEECCchH--------------HHHHHHHHhcCCCcEEEEEEe
Confidence 99998874332 345678899999999999764
No 178
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.31 E-value=1.8e-11 Score=120.27 Aligned_cols=105 Identities=14% Similarity=0.138 Sum_probs=84.6
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCC-CcEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGI-TNGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l-~nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
+..+|||||||+|.++..+++.+|+.+++++|+ +.+++.|++++.+.++ .+++|+.+|+.+- + +. .+|.|+
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~--p~-~~D~v~ 240 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFDP----L--PA-GAGGYV 240 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSC----C--CC-SCSEEE
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCCC----C--CC-CCcEEE
Confidence 357899999999999999999999999999999 9999999999988887 5799999999632 2 23 799998
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEe
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 348 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~t 348 (420)
+...-.+ .... ...++|+++++.|+|||++++..
T Consensus 241 ~~~vlh~--~~~~----~~~~~l~~~~~~L~pgG~l~i~e 274 (332)
T 3i53_A 241 LSAVLHD--WDDL----SAVAILRRCAEAAGSGGVVLVIE 274 (332)
T ss_dssp EESCGGG--SCHH----HHHHHHHHHHHHHTTTCEEEEEE
T ss_pred Eehhhcc--CCHH----HHHHHHHHHHHhcCCCCEEEEEe
Confidence 8632111 1111 12479999999999999998853
No 179
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.30 E-value=6.4e-12 Score=110.73 Aligned_cols=96 Identities=14% Similarity=0.284 Sum_probs=79.1
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
++.+|||+|||+|.++..+++... +++|+|+|+.+++.|+++ .+|++++++| .. .+++++|.|++
T Consensus 17 ~~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~-----~~~v~~~~~d-~~-------~~~~~~D~v~~ 81 (170)
T 3i9f_A 17 KKGVIVDYGCGNGFYCKYLLEFAT--KLYCIDINVIALKEVKEK-----FDSVITLSDP-KE-------IPDNSVDFILF 81 (170)
T ss_dssp CCEEEEEETCTTCTTHHHHHTTEE--EEEEECSCHHHHHHHHHH-----CTTSEEESSG-GG-------SCTTCEEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHhhcC--eEEEEeCCHHHHHHHHHh-----CCCcEEEeCC-CC-------CCCCceEEEEE
Confidence 467899999999999999999873 999999999999999887 4589999999 22 15789999998
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEe
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 348 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~t 348 (420)
...-.+..+ . ..+++++.+.|||||++++..
T Consensus 82 ~~~l~~~~~--~------~~~l~~~~~~L~pgG~l~~~~ 112 (170)
T 3i9f_A 82 ANSFHDMDD--K------QHVISEVKRILKDDGRVIIID 112 (170)
T ss_dssp ESCSTTCSC--H------HHHHHHHHHHEEEEEEEEEEE
T ss_pred ccchhcccC--H------HHHHHHHHHhcCCCCEEEEEE
Confidence 854443321 1 379999999999999999863
No 180
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.30 E-value=7.8e-12 Score=116.67 Aligned_cols=103 Identities=16% Similarity=0.232 Sum_probs=84.4
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
++.+|||||||+|.++..+++..| .+++|+|+++.+++.|++++...++.|+.+.++|+... ++ ....||.|++
T Consensus 91 ~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~----~~-~~~~fD~Ii~ 164 (235)
T 1jg1_A 91 PGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKG----FP-PKAPYDVIIV 164 (235)
T ss_dssp TTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC----CG-GGCCEEEEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccC----CC-CCCCccEEEE
Confidence 467899999999999999999988 89999999999999999999999998999999998332 11 1235999988
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHH
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEE 352 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~ 352 (420)
..+-++ +.+.+.+.|+|||++++.+....
T Consensus 165 ~~~~~~--------------~~~~~~~~L~pgG~lvi~~~~~~ 193 (235)
T 1jg1_A 165 TAGAPK--------------IPEPLIEQLKIGGKLIIPVGSYH 193 (235)
T ss_dssp CSBBSS--------------CCHHHHHTEEEEEEEEEEECSSS
T ss_pred CCcHHH--------------HHHHHHHhcCCCcEEEEEEecCC
Confidence 754432 22467889999999999886543
No 181
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.30 E-value=8.8e-12 Score=121.96 Aligned_cols=102 Identities=17% Similarity=0.185 Sum_probs=85.6
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCC-CCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRK-DLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P-~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
++.+|||||||+|.++..+++..+ +.+|+|+|+|+.+++.|++++...+++|+.++++|+.+... .+++||.|+
T Consensus 75 ~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~-----~~~~fD~Iv 149 (317)
T 1dl5_A 75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVP-----EFSPYDVIF 149 (317)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCG-----GGCCEEEEE
T ss_pred CcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccc-----cCCCeEEEE
Confidence 467999999999999999999977 48899999999999999999999999999999999987521 256899999
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCc
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI 350 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~ 350 (420)
+..+-++. .+.+.+.|||||.+++....
T Consensus 150 ~~~~~~~~--------------~~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 150 VTVGVDEV--------------PETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp ECSBBSCC--------------CHHHHHHEEEEEEEEEEBCB
T ss_pred EcCCHHHH--------------HHHHHHhcCCCcEEEEEECC
Confidence 87544331 14678899999999998654
No 182
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.29 E-value=1.9e-11 Score=122.87 Aligned_cols=121 Identities=17% Similarity=0.238 Sum_probs=92.3
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|++++..++++ ++++++|+.+... .+++||.|++
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~--g~~V~gvDis~~al~~A~~n~~~~~~~-v~~~~~D~~~~~~-----~~~~fD~Ii~ 304 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARM--GAEVVGVEDDLASVLSLQKGLEANALK-AQALHSDVDEALT-----EEARFDIIVT 304 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHT--TCEEEEEESBHHHHHHHHHHHHHTTCC-CEEEECSTTTTSC-----TTCCEEEEEE
T ss_pred CCCEEEEEeeeCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCC-eEEEEcchhhccc-----cCCCeEEEEE
Confidence 4579999999999999999998 579999999999999999999888865 8999999987621 3478999998
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCc-HHHHHHHHHHH
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI-EEVMLRMKQQF 361 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~-~~~~~~~~~~l 361 (420)
+ .|++...+. ..-...++++++.+.|||||.+++.++. ..|...+.+.+
T Consensus 305 n--pp~~~~~~~-~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l~~~~~l~~~f 354 (381)
T 3dmg_A 305 N--PPFHVGGAV-ILDVAQAFVNVAAARLRPGGVFFLVSNPFLKYEPLLEEKF 354 (381)
T ss_dssp C--CCCCTTCSS-CCHHHHHHHHHHHHHEEEEEEEEEEECTTSCHHHHHHHHH
T ss_pred C--Cchhhcccc-cHHHHHHHHHHHHHhcCcCcEEEEEEcCCCChHHHHHHhh
Confidence 7 333221110 0112258999999999999999998754 33444444444
No 183
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.29 E-value=5.1e-12 Score=125.05 Aligned_cols=120 Identities=18% Similarity=0.286 Sum_probs=91.8
Q ss_pred CCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEEe
Q 014711 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQ 310 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~~ 310 (420)
+.+|||+|||+|.++..+++.+|+.+++|+|+|+.+++.|++++...++. ++++++|+... .+++||.|+++
T Consensus 197 ~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~-~~~~~~d~~~~-------~~~~fD~Iv~~ 268 (343)
T 2pjd_A 197 KGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVE-GEVFASNVFSE-------VKGRFDMIISN 268 (343)
T ss_dssp CSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCC-CEEEECSTTTT-------CCSCEEEEEEC
T ss_pred CCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCC-CEEEEcccccc-------ccCCeeEEEEC
Confidence 56899999999999999999999999999999999999999999887764 67889998664 36789999987
Q ss_pred CCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeC-cHHHHHHHHHHH
Q 014711 311 CPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSD-IEEVMLRMKQQF 361 (420)
Q Consensus 311 fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td-~~~~~~~~~~~l 361 (420)
. |++...+ ...-....+++++.++|||||.+++.+. ...|...+.+.+
T Consensus 269 ~--~~~~g~~-~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~l~~~f 317 (343)
T 2pjd_A 269 P--PFHDGMQ-TSLDAAQTLIRGAVRHLNSGGELRIVANAFLPYPDVLDETF 317 (343)
T ss_dssp C--CCCSSSH-HHHHHHHHHHHHHGGGEEEEEEEEEEEETTSSHHHHHHHHH
T ss_pred C--CcccCcc-CCHHHHHHHHHHHHHhCCCCcEEEEEEcCCCCcHHHHHHhc
Confidence 3 3321111 0111235899999999999999999753 334444444443
No 184
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.29 E-value=6.6e-12 Score=126.13 Aligned_cols=105 Identities=16% Similarity=0.158 Sum_probs=80.8
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHh-------HHhCC--CcEEEEEcChhhhhh-hhhcc
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSL-------QLSGI--TNGYFIATNATSTFR-SIVAS 299 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~-------~~~~l--~nv~~~~~Da~~~~~-~~~~~ 299 (420)
.+.+|||||||+|.+++.+|+..+...++|||+|+.+++.|++++ ...|+ .++.|+++|+.+..- +.+
T Consensus 173 ~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp~~d~~-- 250 (438)
T 3uwp_A 173 DDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWRERI-- 250 (438)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHHHHHHH--
T ss_pred CCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCcccccc--
Confidence 478999999999999999999887777999999999999998764 34565 589999999988621 111
Q ss_pred CCCeEeEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 300 YPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 300 ~~~~~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
..+|.|+++. +++. ... ...|.++.+.|||||+|++.
T Consensus 251 --~~aDVVf~Nn--~~F~-pdl------~~aL~Ei~RvLKPGGrIVss 287 (438)
T 3uwp_A 251 --ANTSVIFVNN--FAFG-PEV------DHQLKERFANMKEGGRIVSS 287 (438)
T ss_dssp --HTCSEEEECC--TTCC-HHH------HHHHHHHHTTSCTTCEEEES
T ss_pred --CCccEEEEcc--cccC-chH------HHHHHHHHHcCCCCcEEEEe
Confidence 3689998862 3321 111 25667889999999999863
No 185
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.29 E-value=1.4e-11 Score=119.78 Aligned_cols=116 Identities=14% Similarity=0.107 Sum_probs=88.3
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHh-------CCCcEEEEEcChhhhh-hhhhccCC
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLS-------GITNGYFIATNATSTF-RSIVASYP 301 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~-------~l~nv~~~~~Da~~~~-~~~~~~~~ 301 (420)
++.+|||||||+|.++..+++. +..+++|+|+|+.+++.|+++.... +..++.++++|+.+.. ...++..+
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 112 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKG-RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQ 112 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTT
T ss_pred CCCEEEEECCCCcHHHHHHHhc-CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCC
Confidence 3678999999999999999974 6789999999999999999988664 4458999999998751 01122124
Q ss_pred CeEeEEEEeCCCCCC-CCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcH
Q 014711 302 GKLILVSIQCPNPDF-NRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIE 351 (420)
Q Consensus 302 ~~~d~i~~~fpdp~~-k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~ 351 (420)
++||.|++++.-.|. ... -....+++++.++|||||.|++.+.+.
T Consensus 113 ~~fD~V~~~~~l~~~~~~~-----~~~~~~l~~~~~~LkpgG~li~~~~~~ 158 (313)
T 3bgv_A 113 MCFDICSCQFVCHYSFESY-----EQADMMLRNACERLSPGGYFIGTTPNS 158 (313)
T ss_dssp CCEEEEEEETCGGGGGGSH-----HHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred CCEEEEEEecchhhccCCH-----HHHHHHHHHHHHHhCCCcEEEEecCCh
Confidence 589999998654442 110 011489999999999999999987554
No 186
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.29 E-value=8.5e-13 Score=123.29 Aligned_cols=102 Identities=16% Similarity=0.112 Sum_probs=81.4
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCC-CcEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGI-TNGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l-~nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
.+.+|||+|||+|.++..+++. ..+|+|+|+|+.+++.|++++...++ .|+.|+++|+.++. .+.+||.|+
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~------~~~~~D~v~ 149 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALT--GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA------SFLKADVVF 149 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG------GGCCCSEEE
T ss_pred CCCEEEECccccCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc------ccCCCCEEE
Confidence 3688999999999999999987 48999999999999999999999998 58999999998873 357899999
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
++. |+....... ..+..+.++|+|||.+++.
T Consensus 150 ~~~--~~~~~~~~~------~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 150 LSP--PWGGPDYAT------AETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp ECC--CCSSGGGGG------SSSBCTTTSCSSCHHHHHH
T ss_pred ECC--CcCCcchhh------hHHHHHHhhcCCcceeHHH
Confidence 873 332211111 2445678889999986653
No 187
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.29 E-value=1.7e-11 Score=107.38 Aligned_cols=125 Identities=14% Similarity=0.076 Sum_probs=90.1
Q ss_pred CCCEEEEEcCCccHHHHHHHHhC-CCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhh-----hhhhccCCCe
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKR-KDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTF-----RSIVASYPGK 303 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~-P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~-----~~~~~~~~~~ 303 (420)
++.+|||+|||+|.++..+++.+ |+.+++|+|+++ ++. ..++.++++|+.+.. +..+ ++++
T Consensus 22 ~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~----------~~~~~~~~~d~~~~~~~~~~~~~~--~~~~ 88 (180)
T 1ej0_A 22 PGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDP----------IVGVDFLQGDFRDELVMKALLERV--GDSK 88 (180)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCC----------CTTEEEEESCTTSHHHHHHHHHHH--TTCC
T ss_pred CCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-ccc----------cCcEEEEEcccccchhhhhhhccC--CCCc
Confidence 46799999999999999999994 779999999999 653 268999999998751 1113 4678
Q ss_pred EeEEEEeCCCCCCCCcchhh---hhhHHHHHHHHHhhccCCeEEEEEeCcHHHHHHHHHHHHHcCCce
Q 014711 304 LILVSIQCPNPDFNRPEHRW---RMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGK 368 (420)
Q Consensus 304 ~d~i~~~fpdp~~k~~~~k~---Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~~~~~~~~l~~~g~~~ 368 (420)
||.|+++.+-.+........ .-+...+++.+.++|+|||.+++.+........+.+.+.++ |..
T Consensus 89 ~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~-~~~ 155 (180)
T 1ej0_A 89 VQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLREIRSL-FTK 155 (180)
T ss_dssp EEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTTHHHHHHHHHHH-EEE
T ss_pred eeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCcHHHHHHHHHHh-hhh
Confidence 99999976555543321111 11125899999999999999999764444445566666664 443
No 188
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.29 E-value=1.5e-11 Score=122.06 Aligned_cols=105 Identities=15% Similarity=0.218 Sum_probs=83.8
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCc-EEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITN-GYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~n-v~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
++.+|||||||+|.++..+++. +..+|+|+|+| ++++.|++++...++.+ ++++++|+.++ +.++++||.|+
T Consensus 66 ~~~~VLDvGcG~G~~~~~la~~-g~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~~-----~~~~~~fD~Ii 138 (349)
T 3q7e_A 66 KDKVVLDVGSGTGILCMFAAKA-GARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEEV-----ELPVEKVDIII 138 (349)
T ss_dssp TTCEEEEESCTTSHHHHHHHHT-TCSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTTC-----CCSSSCEEEEE
T ss_pred CCCEEEEEeccchHHHHHHHHC-CCCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHHc-----cCCCCceEEEE
Confidence 3688999999999999999987 66799999999 59999999999999876 99999999876 22468999998
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEE
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFL 346 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~ 346 (420)
+..+....... -..+.+++.+.++|||||.+++
T Consensus 139 s~~~~~~l~~~-----~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 139 SEWMGYCLFYE-----SMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp ECCCBBTBTBT-----CCHHHHHHHHHHHEEEEEEEES
T ss_pred EccccccccCc-----hhHHHHHHHHHHhCCCCCEEcc
Confidence 86432211000 0124789999999999999864
No 189
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.28 E-value=9e-12 Score=118.22 Aligned_cols=99 Identities=15% Similarity=0.210 Sum_probs=83.2
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
.+.+|||||||+|.++..+++..|..+++|+|+|+.+++.|+++. .++.++++|+.++ +..+++||.|+.
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~~d~~~~-----~~~~~~fD~v~~ 154 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY-----PQVTFCVASSHRL-----PFSDTSMDAIIR 154 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC-----TTSEEEECCTTSC-----SBCTTCEEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC-----CCcEEEEcchhhC-----CCCCCceeEEEE
Confidence 467999999999999999999988899999999999999998764 4689999999765 224679999998
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHH
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEV 353 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~ 353 (420)
.+. + .+++++.++|||||.+++.+.....
T Consensus 155 ~~~-~--------------~~l~~~~~~L~pgG~l~~~~~~~~~ 183 (269)
T 1p91_A 155 IYA-P--------------CKAEELARVVKPGGWVITATPGPRH 183 (269)
T ss_dssp ESC-C--------------CCHHHHHHHEEEEEEEEEEEECTTT
T ss_pred eCC-h--------------hhHHHHHHhcCCCcEEEEEEcCHHH
Confidence 754 1 3578899999999999998755443
No 190
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.28 E-value=1.3e-11 Score=112.54 Aligned_cols=96 Identities=10% Similarity=0.160 Sum_probs=78.6
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCC-eEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDL-NFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~-~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
++..|||||||+|.++..+ .. +++|+|+|+.+++.|+++. .++.++++|+.++ +.++++||.|+
T Consensus 36 ~~~~vLdiG~G~G~~~~~l-----~~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~~d~~~~-----~~~~~~fD~v~ 100 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL-----PYPQKVGVEPSEAMLAVGRRRA-----PEATWVRAWGEAL-----PFPGESFDVVL 100 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC-----CCSEEEEECCCHHHHHHHHHHC-----TTSEEECCCTTSC-----CSCSSCEEEEE
T ss_pred CCCeEEEECCCCCHhHHhC-----CCCeEEEEeCCHHHHHHHHHhC-----CCcEEEEcccccC-----CCCCCcEEEEE
Confidence 4679999999999999887 34 8999999999999998876 5789999999775 22567899999
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEe
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 348 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~t 348 (420)
+...-.+..+ . ..+++++.++|||||.+++.+
T Consensus 101 ~~~~l~~~~~--~------~~~l~~~~~~L~pgG~l~i~~ 132 (211)
T 2gs9_A 101 LFTTLEFVED--V------ERVLLEARRVLRPGGALVVGV 132 (211)
T ss_dssp EESCTTTCSC--H------HHHHHHHHHHEEEEEEEEEEE
T ss_pred EcChhhhcCC--H------HHHHHHHHHHcCCCCEEEEEe
Confidence 8754443221 1 379999999999999999976
No 191
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.28 E-value=2.4e-11 Score=121.65 Aligned_cols=130 Identities=9% Similarity=0.052 Sum_probs=98.4
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
.+.+|||+| |+|.+++.+++..|..+++|+|+|+.+++.|++++.+.|+.|++++++|+.+.++.. .+++||.|++
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~---~~~~fD~Vi~ 247 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDY---ALHKFDTFIT 247 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTT---TSSCBSEEEE
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhh---ccCCccEEEE
Confidence 367999999 999999999999888899999999999999999999999889999999998732211 2468999998
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCe-EEEEEeCc----HHHHHHHHHHHH-HcCCceeEee
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDG-KVFLQSDI----EEVMLRMKQQFL-EYGKGKLVLV 372 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG-~l~~~td~----~~~~~~~~~~l~-~~g~~~~~~~ 372 (420)
+- |+. ... ...+++.+.+.||||| .+++.+.. ......+.+.+. ..++....+.
T Consensus 248 ~~--p~~----~~~---~~~~l~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~ 307 (373)
T 2qm3_A 248 DP--PET----LEA---IRAFVGRGIATLKGPRCAGYFGITRRESSLDKWREIQKLLLNEFNVVITDII 307 (373)
T ss_dssp CC--CSS----HHH---HHHHHHHHHHTBCSTTCEEEEEECTTTCCHHHHHHHHHHHHHTSCCEEEEEE
T ss_pred CC--CCc----hHH---HHHHHHHHHHHcccCCeEEEEEEecCcCCHHHHHHHHHHHHHhcCcchhhhh
Confidence 62 331 111 2589999999999999 44555533 222245666676 7776554333
No 192
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.28 E-value=1.8e-11 Score=122.03 Aligned_cols=107 Identities=15% Similarity=0.086 Sum_probs=85.0
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCC-CcEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGI-TNGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l-~nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
+..+|||||||+|.++..+++++|+.+++++|+ +.+++.|++++.+.++ .+++|+.+|+.+.. ..+ ++++|.|+
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~---p~~~D~v~ 253 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRD-VPF---PTGFDAVW 253 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSS-CCC---CCCCSEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccC-CCC---CCCcCEEE
Confidence 468999999999999999999999999999999 9999999999888776 47999999997630 001 36799998
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
+...-..+ ... ....+|+++++.|||||+|++.
T Consensus 254 ~~~vlh~~--~~~----~~~~~l~~~~~~L~pgG~l~i~ 286 (363)
T 3dp7_A 254 MSQFLDCF--SEE----EVISILTRVAQSIGKDSKVYIM 286 (363)
T ss_dssp EESCSTTS--CHH----HHHHHHHHHHHHCCTTCEEEEE
T ss_pred EechhhhC--CHH----HHHHHHHHHHHhcCCCcEEEEE
Confidence 86422110 111 1137899999999999999885
No 193
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.27 E-value=9.4e-11 Score=118.21 Aligned_cols=129 Identities=23% Similarity=0.244 Sum_probs=94.2
Q ss_pred CCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEEe
Q 014711 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQ 310 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~~ 310 (420)
+.+|||+|||+|.+++.+|+. ...|+|+|+|+.+++.|++|+..+++.+ ++.++|+.+.++.. ++.||.|+++
T Consensus 215 g~~VLDlg~GtG~~sl~~a~~--ga~V~avDis~~al~~a~~n~~~ng~~~-~~~~~D~~~~l~~~----~~~fD~Ii~d 287 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRAARK--GAYALAVDKDLEALGVLDQAALRLGLRV-DIRHGEALPTLRGL----EGPFHHVLLD 287 (393)
T ss_dssp TCEEEEESCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCCC-EEEESCHHHHHHTC----CCCEEEEEEC
T ss_pred CCeEEEcccchhHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHhCCCC-cEEEccHHHHHHHh----cCCCCEEEEC
Confidence 789999999999999999997 4459999999999999999999999874 57799998875321 3349999886
Q ss_pred CCCCCCC-Ccchhhhh--hHHHHHHHHHhhccCCeEEEEEeCc-----HHHHHHHHHHHHHcCCce
Q 014711 311 CPNPDFN-RPEHRWRM--VQRSLVEAVSDLLVHDGKVFLQSDI-----EEVMLRMKQQFLEYGKGK 368 (420)
Q Consensus 311 fpdp~~k-~~~~k~Rl--~~~~~l~~i~~~LkpgG~l~~~td~-----~~~~~~~~~~l~~~g~~~ 368 (420)
.|.+. .+....+. ...+++..+.+.|+|||.|++.+.. +.+.+.+.+.+...+...
T Consensus 288 --pP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~~~~f~~~v~~a~~~~g~~~ 351 (393)
T 4dmg_A 288 --PPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHLRLEDLLEVARRAAADLGRRL 351 (393)
T ss_dssp --CCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHTCCE
T ss_pred --CCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHhCCeE
Confidence 33322 22111111 2358899999999999999976643 233344555666666543
No 194
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.27 E-value=5.3e-12 Score=119.72 Aligned_cols=97 Identities=15% Similarity=0.171 Sum_probs=78.2
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
++.+|||||||+|.++..+++ |..+++|+|+|+.+++.|+++. |+.|+++|+.++ +.++++||.|++
T Consensus 34 ~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~------~~~~~~~d~~~~-----~~~~~~fD~v~~ 100 (261)
T 3ege_A 34 KGSVIADIGAGTGGYSVALAN--QGLFVYAVEPSIVMRQQAVVHP------QVEWFTGYAENL-----ALPDKSVDGVIS 100 (261)
T ss_dssp TTCEEEEETCTTSHHHHHHHT--TTCEEEEECSCHHHHHSSCCCT------TEEEECCCTTSC-----CSCTTCBSEEEE
T ss_pred CCCEEEEEcCcccHHHHHHHh--CCCEEEEEeCCHHHHHHHHhcc------CCEEEECchhhC-----CCCCCCEeEEEE
Confidence 468999999999999999997 6889999999999998776543 899999999875 225789999998
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEe
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 348 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~t 348 (420)
.+.-.+..+ ...+++++.++|| ||++++.+
T Consensus 101 ~~~l~~~~~--------~~~~l~~~~~~Lk-gG~~~~~~ 130 (261)
T 3ege_A 101 ILAIHHFSH--------LEKSFQEMQRIIR-DGTIVLLT 130 (261)
T ss_dssp ESCGGGCSS--------HHHHHHHHHHHBC-SSCEEEEE
T ss_pred cchHhhccC--------HHHHHHHHHHHhC-CcEEEEEE
Confidence 754322211 1489999999999 99777654
No 195
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.27 E-value=2e-11 Score=121.19 Aligned_cols=211 Identities=10% Similarity=0.036 Sum_probs=128.1
Q ss_pred CcccHHHHHHHhcCCCeEE--Eec---cceEEEcCCCCchHHHHHHHHHhhhcCCCC---eeEechhHHH-H-HhhcCCC
Q 014711 115 GPRSVEEITSTITKCKKVI--WVG---PVKFRFSSQYSNGASKLTGMLCKVSQGTCN---VTVIGSMACK-A-IAKVSSS 184 (420)
Q Consensus 115 Gp~T~~~~~~~~~~~~~i~--wnG---p~G~~e~~~f~~GT~~l~~~~a~~~~~~~~---~~i~gg~~~~-~-~~~~~~~ 184 (420)
||.|++++++.++...+.+ |.. .+|+++.+ .|+|.+.+..+.....+.. .++.+-.... . .......
T Consensus 63 ~~~t~~eLA~~~g~~~~~l~rlLr~L~~~gll~~~---~~~y~~t~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (359)
T 1x19_A 63 GPKDLATLAADTGSVPPRLEMLLETLRQMRVINLE---DGKWSLTEFADYMFSPTPKEPNLHQTPVAKAMAFLADDFYMG 139 (359)
T ss_dssp CCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEE---TTEEEECHHHHHHSSSSCSBTTBCCHHHHHHHHHHHHHTGGG
T ss_pred CCCCHHHHHHHhCcChHHHHHHHHHHHhCCCeEee---CCeEecCHHHHHHhcCCCCCccccHHHHHHHHHHHHHHHHHH
Confidence 8999999999999876653 444 45888865 2466654332222212122 2222211111 1 1111112
Q ss_pred -cceeeeecCCCeeeeeeccccCCC---c-ccccc----CCc-c-ccccccccCCCCCCEEEEEcCCccHHHHHHHHhCC
Q 014711 185 -IFGLNMVESGSAVWEFLKGRMLPG---V-SALDR----AFP-F-DIDWSAAYHDPAQPLVVDIGSGNGLFLLGMARKRK 253 (420)
Q Consensus 185 -~~~~st~~GGGa~le~l~g~~lPg---v-~aL~~----~~p-~-~~~~~~~f~~~~~~~vLDIGcG~G~~~~~lA~~~P 253 (420)
.+.+++ |.. ++++.. .|. . +.+.. ... . ...+.+.+.-.+..+|||||||+|.++..+++++|
T Consensus 140 L~~~l~~--g~~--~~~~~~--~p~~~~~~~~f~~~m~~~~~~~~~~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p 213 (359)
T 1x19_A 140 LSQAVRG--QKN--FKGQVP--YPPVTREDNLYFEEIHRSNAKFAIQLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFP 213 (359)
T ss_dssp HHHHHTT--SCC--CCCSSC--SSCCSHHHHHHHHHHHHTTCHHHHHHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCT
T ss_pred HHHHHhc--CCC--Cccccc--CchhhHHHHHHHHHHHHhccchhHHHHHHhcCCCCCCEEEEECCcccHHHHHHHHHCC
Confidence 245556 332 555432 222 1 11111 000 0 00122223222468999999999999999999999
Q ss_pred CCeEEEEeCChHHHHHHHHHhHHhCCCc-EEEEEcChhhhhhhhhccCCCeEeEEEEeCCCCCCCCcchhhhhhHHHHHH
Q 014711 254 DLNFLGLEVNGKLVTHCRDSLQLSGITN-GYFIATNATSTFRSIVASYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVE 332 (420)
Q Consensus 254 ~~~viGiDis~~~i~~A~~~~~~~~l~n-v~~~~~Da~~~~~~~~~~~~~~~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~ 332 (420)
+.+++++|+ +.+++.|++++.+.++.+ ++++++|+.+. + + ++ .|.|++...-....+ -....+|+
T Consensus 214 ~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~--~--~~--~D~v~~~~vlh~~~d------~~~~~~l~ 279 (359)
T 1x19_A 214 ELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKE-S--Y--PE--ADAVLFCRILYSANE------QLSTIMCK 279 (359)
T ss_dssp TCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTS-C--C--CC--CSEEEEESCGGGSCH------HHHHHHHH
T ss_pred CCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccC-C--C--CC--CCEEEEechhccCCH------HHHHHHHH
Confidence 999999999 999999999998888765 99999999765 1 1 22 299887632211000 01247999
Q ss_pred HHHhhccCCeEEEEEe
Q 014711 333 AVSDLLVHDGKVFLQS 348 (420)
Q Consensus 333 ~i~~~LkpgG~l~~~t 348 (420)
++.++|||||++++..
T Consensus 280 ~~~~~L~pgG~l~i~e 295 (359)
T 1x19_A 280 KAFDAMRSGGRLLILD 295 (359)
T ss_dssp HHHTTCCTTCEEEEEE
T ss_pred HHHHhcCCCCEEEEEe
Confidence 9999999999997753
No 196
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.27 E-value=1.5e-11 Score=116.90 Aligned_cols=108 Identities=10% Similarity=0.073 Sum_probs=82.9
Q ss_pred CCCEEEEEcCCccHHHHHHHHhC-CCCeEEEEeCChH------HHHHHHHHhHHhCC-CcEEEEEcC-hhhhhhhhhccC
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKR-KDLNFLGLEVNGK------LVTHCRDSLQLSGI-TNGYFIATN-ATSTFRSIVASY 300 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~-P~~~viGiDis~~------~i~~A~~~~~~~~l-~nv~~~~~D-a~~~~~~~~~~~ 300 (420)
++.+|||||||+|.++..+++.+ |+.+++|+|+|+. +++.|++++...++ .|++++++| .... .++.+
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~~~~ 119 (275)
T 3bkx_A 43 PGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDD---LGPIA 119 (275)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTC---CGGGT
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhc---cCCCC
Confidence 46899999999999999999996 8899999999998 99999999988777 589999998 2211 11224
Q ss_pred CCeEeEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEe
Q 014711 301 PGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 348 (420)
Q Consensus 301 ~~~~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~t 348 (420)
+++||.|++..+-.+... + ..+++.+.++++|||++++..
T Consensus 120 ~~~fD~v~~~~~l~~~~~--~------~~~~~~~~~l~~~gG~l~~~~ 159 (275)
T 3bkx_A 120 DQHFDRVVLAHSLWYFAS--A------NALALLFKNMAAVCDHVDVAE 159 (275)
T ss_dssp TCCCSEEEEESCGGGSSC--H------HHHHHHHHHHTTTCSEEEEEE
T ss_pred CCCEEEEEEccchhhCCC--H------HHHHHHHHHHhCCCCEEEEEE
Confidence 688999998743222111 1 246777777777899999863
No 197
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.26 E-value=3e-11 Score=120.60 Aligned_cols=212 Identities=14% Similarity=0.157 Sum_probs=128.3
Q ss_pred CcccHHHHHHHhcCCCeEE--Eec---cceEEEcCCCCchH-HHHHHHHHhhhcCCCCeeEechhHHHH---Hhh-cCCC
Q 014711 115 GPRSVEEITSTITKCKKVI--WVG---PVKFRFSSQYSNGA-SKLTGMLCKVSQGTCNVTVIGSMACKA---IAK-VSSS 184 (420)
Q Consensus 115 Gp~T~~~~~~~~~~~~~i~--wnG---p~G~~e~~~f~~GT-~~l~~~~a~~~~~~~~~~i~gg~~~~~---~~~-~~~~ 184 (420)
||.|++++++.++...+.+ |.. .+|+++.+. .|+ |.+.+.-..+.. ....++.+...... ... ...-
T Consensus 70 g~~t~~eLA~~~g~~~~~l~rlLr~L~~~g~l~~~~--~~~~y~~t~~s~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~l 146 (369)
T 3gwz_A 70 GPRTATALAEATGAHEQTLRRLLRLLATVGVFDDLG--HDDLFAQNALSAVLLP-DPASPVATDARFQAAPWHWRAWEQL 146 (369)
T ss_dssp SCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSSEECS--STTEEECCHHHHTTSC-CTTCHHHHHHHHHHSHHHHHHHHTH
T ss_pred CCCCHHHHHHHHCcCHHHHHHHHHHHHhCCCEEEeC--CCceEecCHHHHHHhc-CCchhHHHHHHHcCCHHHHHHHHhH
Confidence 8999999999999887763 444 459888642 455 555333222221 11122222211100 001 1111
Q ss_pred cceeeeecCCCe--------eeeeeccccCCCc-cccccCCc-----cccccccccCCCCCCEEEEEcCCccHHHHHHHH
Q 014711 185 IFGLNMVESGSA--------VWEFLKGRMLPGV-SALDRAFP-----FDIDWSAAYHDPAQPLVVDIGSGNGLFLLGMAR 250 (420)
Q Consensus 185 ~~~~st~~GGGa--------~le~l~g~~lPgv-~aL~~~~p-----~~~~~~~~f~~~~~~~vLDIGcG~G~~~~~lA~ 250 (420)
.+.++| |..+ +++++... |.. +.+...+. ....+.+.+.-.+..+|||||||+|.++..+++
T Consensus 147 ~~~l~~--g~~~~~~~~g~~~~~~~~~~--~~~~~~f~~~m~~~~~~~~~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~ 222 (369)
T 3gwz_A 147 THSVRT--GEASFDVANGTSFWQLTHED--PKARELFNRAMGSVSLTEAGQVAAAYDFSGAATAVDIGGGRGSLMAAVLD 222 (369)
T ss_dssp HHHHHH--SSCSHHHHHSSCHHHHHHHC--HHHHHHHHHHHHHHHHHHHHHHHHHSCCTTCSEEEEETCTTSHHHHHHHH
T ss_pred HHHHhC--CCChhHhhcCCCHHHHHHhC--HHHHHHHHHHHHHHHhhhHHHHHHhCCCccCcEEEEeCCCccHHHHHHHH
Confidence 345556 3332 22332211 110 01100000 001122233222468999999999999999999
Q ss_pred hCCCCeEEEEeCChHHHHHHHHHhHHhCC-CcEEEEEcChhhhhhhhhccCCCeEeEEEEeCCCCCCCCcchhhhhhHHH
Q 014711 251 KRKDLNFLGLEVNGKLVTHCRDSLQLSGI-TNGYFIATNATSTFRSIVASYPGKLILVSIQCPNPDFNRPEHRWRMVQRS 329 (420)
Q Consensus 251 ~~P~~~viGiDis~~~i~~A~~~~~~~~l-~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~~fpdp~~k~~~~k~Rl~~~~ 329 (420)
++|+.+++++|+ +.+++.|++++...++ ++++|+.+|+.+. + +. .+|.|++...-.++ ... ...+
T Consensus 223 ~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~----~--p~-~~D~v~~~~vlh~~--~d~----~~~~ 288 (369)
T 3gwz_A 223 AFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFET----I--PD-GADVYLIKHVLHDW--DDD----DVVR 288 (369)
T ss_dssp HCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTTC----C--CS-SCSEEEEESCGGGS--CHH----HHHH
T ss_pred HCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCCC----C--CC-CceEEEhhhhhccC--CHH----HHHH
Confidence 999999999999 9999999999988886 5799999999732 2 23 79999886321111 111 1137
Q ss_pred HHHHHHhhccCCeEEEEE
Q 014711 330 LVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 330 ~l~~i~~~LkpgG~l~~~ 347 (420)
+|+++++.|+|||++++.
T Consensus 289 ~L~~~~~~L~pgG~l~i~ 306 (369)
T 3gwz_A 289 ILRRIATAMKPDSRLLVI 306 (369)
T ss_dssp HHHHHHTTCCTTCEEEEE
T ss_pred HHHHHHHHcCCCCEEEEE
Confidence 999999999999999885
No 198
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.26 E-value=1.8e-11 Score=110.76 Aligned_cols=121 Identities=15% Similarity=0.183 Sum_probs=83.5
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCC--CCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhh--------------
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRK--DLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTF-------------- 293 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P--~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~-------------- 293 (420)
++.+|||+|||+|.++..+++++| ..+++|+|+|+.+ ..+|+.++++|+.+..
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~ 90 (201)
T 2plw_A 22 KNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PIPNVYFIQGEIGKDNMNNIKNINYIDNMN 90 (201)
T ss_dssp TTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CCTTCEEEECCTTTTSSCCC----------
T ss_pred CCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CCCCceEEEccccchhhhhhcccccccccc
Confidence 357899999999999999999988 6899999999931 2467999999997652
Q ss_pred -----h---hhhccCCCeEeEEEEeCCCCCCCC--cchhh-hhhHHHHHHHHHhhccCCeEEEEEeCcHHHHHHHHHHHH
Q 014711 294 -----R---SIVASYPGKLILVSIQCPNPDFNR--PEHRW-RMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFL 362 (420)
Q Consensus 294 -----~---~~~~~~~~~~d~i~~~fpdp~~k~--~~~k~-Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~~~~~~~~l~ 362 (420)
. ..+ ++.+||.|+++.+-+|... .++.+ .-....+++.+.++|||||.|++.+-.......+.+.+.
T Consensus 91 ~~~~~~~~~~~~--~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~l~~~l~ 168 (201)
T 2plw_A 91 NNSVDYKLKEIL--QDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGSQTNNLKTYLK 168 (201)
T ss_dssp -CHHHHHHHHHH--TTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTTHHHHHHHHH
T ss_pred chhhHHHHHhhc--CCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCCCCHHHHHHHHH
Confidence 0 012 3578999998754444211 11111 111235889999999999999986532222334555555
Q ss_pred H
Q 014711 363 E 363 (420)
Q Consensus 363 ~ 363 (420)
.
T Consensus 169 ~ 169 (201)
T 2plw_A 169 G 169 (201)
T ss_dssp T
T ss_pred H
Confidence 5
No 199
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.25 E-value=4.8e-11 Score=114.52 Aligned_cols=108 Identities=15% Similarity=0.098 Sum_probs=82.9
Q ss_pred CCEEEEEcCCc---cHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhh--------hhhcc
Q 014711 231 QPLVVDIGSGN---GLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFR--------SIVAS 299 (420)
Q Consensus 231 ~~~vLDIGcG~---G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~--------~~~~~ 299 (420)
...|||||||+ |.++..+++.+|+.+|+|+|+|+.|++.|++++.. ..+++|+++|+.+... +.+
T Consensus 78 ~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~--~~~v~~~~~D~~~~~~~~~~~~~~~~~-- 153 (274)
T 2qe6_A 78 ISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK--DPNTAVFTADVRDPEYILNHPDVRRMI-- 153 (274)
T ss_dssp CCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT--CTTEEEEECCTTCHHHHHHSHHHHHHC--
T ss_pred CCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC--CCCeEEEEeeCCCchhhhccchhhccC--
Confidence 46899999999 99887777889999999999999999999998743 3589999999976410 122
Q ss_pred CCCeEeEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEe
Q 014711 300 YPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 348 (420)
Q Consensus 300 ~~~~~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~t 348 (420)
...++|.|++++.-.|..+.. ...+|++++++|+|||+|++..
T Consensus 154 d~~~~d~v~~~~vlh~~~d~~------~~~~l~~~~~~L~pGG~l~i~~ 196 (274)
T 2qe6_A 154 DFSRPAAIMLVGMLHYLSPDV------VDRVVGAYRDALAPGSYLFMTS 196 (274)
T ss_dssp CTTSCCEEEETTTGGGSCTTT------HHHHHHHHHHHSCTTCEEEEEE
T ss_pred CCCCCEEEEEechhhhCCcHH------HHHHHHHHHHhCCCCcEEEEEE
Confidence 224789998764333222111 1379999999999999999874
No 200
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.24 E-value=1.1e-11 Score=114.99 Aligned_cols=102 Identities=17% Similarity=0.302 Sum_probs=83.6
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCC------CCeEEEEeCChHHHHHHHHHhHHhC-----CCcEEEEEcChhhhhhhhhc
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRK------DLNFLGLEVNGKLVTHCRDSLQLSG-----ITNGYFIATNATSTFRSIVA 298 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P------~~~viGiDis~~~i~~A~~~~~~~~-----l~nv~~~~~Da~~~~~~~~~ 298 (420)
++.+|||||||+|.++..+++..+ ..+|+|+|+++.+++.|++++.+.+ ..|+.++++|+.+.++
T Consensus 84 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~---- 159 (227)
T 1r18_A 84 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYP---- 159 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCG----
T ss_pred CCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCC----
Confidence 367999999999999999999765 3699999999999999999988776 6789999999976321
Q ss_pred cCCCeEeEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCc
Q 014711 299 SYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI 350 (420)
Q Consensus 299 ~~~~~~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~ 350 (420)
..++||.|++..+-++ +++.+.+.|||||++++.+..
T Consensus 160 -~~~~fD~I~~~~~~~~--------------~~~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 160 -PNAPYNAIHVGAAAPD--------------TPTELINQLASGGRLIVPVGP 196 (227)
T ss_dssp -GGCSEEEEEECSCBSS--------------CCHHHHHTEEEEEEEEEEESC
T ss_pred -cCCCccEEEECCchHH--------------HHHHHHHHhcCCCEEEEEEec
Confidence 1368999988754432 336788999999999998743
No 201
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.24 E-value=1e-10 Score=112.52 Aligned_cols=133 Identities=11% Similarity=0.052 Sum_probs=89.3
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeC-ChHHHHHHHHHh-----HHhCCC-----cEEEEEcChhhhhhhhhc
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEV-NGKLVTHCRDSL-----QLSGIT-----NGYFIATNATSTFRSIVA 298 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDi-s~~~i~~A~~~~-----~~~~l~-----nv~~~~~Da~~~~~~~~~ 298 (420)
.+.+|||||||+|.+++.+++.. ..+|+|+|+ |+.+++.|++++ ...++. |+.+...|..+.......
T Consensus 79 ~~~~vLDlG~G~G~~~~~~a~~~-~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 157 (281)
T 3bzb_A 79 AGKTVCELGAGAGLVSIVAFLAG-ADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQR 157 (281)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTT-CSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHH
T ss_pred CCCeEEEecccccHHHHHHHHcC-CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHh
Confidence 36789999999999999998863 458999999 899999999999 555554 788886665432111110
Q ss_pred c-CCCeEeEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhcc---C--CeEEEEEeCcHH-----HHHHHHHHHHHcC-C
Q 014711 299 S-YPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLV---H--DGKVFLQSDIEE-----VMLRMKQQFLEYG-K 366 (420)
Q Consensus 299 ~-~~~~~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~Lk---p--gG~l~~~td~~~-----~~~~~~~~l~~~g-~ 366 (420)
. .+.+||.|++. |..+.... ...+++.+.++|+ | ||.+++...... ......+.+++.| |
T Consensus 158 ~~~~~~fD~Ii~~--dvl~~~~~------~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~~~~~~~~~~~~~~l~~~G~f 229 (281)
T 3bzb_A 158 CTGLQRFQVVLLA--DLLSFHQA------HDALLRSVKMLLALPANDPTAVALVTFTHHRPHLAERDLAFFRLVNADGAL 229 (281)
T ss_dssp HHSCSSBSEEEEE--SCCSCGGG------HHHHHHHHHHHBCCTTTCTTCEEEEEECC--------CTHHHHHHHHSTTE
T ss_pred hccCCCCCEEEEe--CcccChHH------HHHHHHHHHHHhcccCCCCCCEEEEEEEeeecccchhHHHHHHHHHhcCCE
Confidence 0 25789999875 33322111 2479999999999 9 998777543321 1234666778888 7
Q ss_pred ceeEe
Q 014711 367 GKLVL 371 (420)
Q Consensus 367 ~~~~~ 371 (420)
....+
T Consensus 230 ~v~~~ 234 (281)
T 3bzb_A 230 IAEPW 234 (281)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 76544
No 202
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.24 E-value=4.8e-11 Score=123.27 Aligned_cols=134 Identities=16% Similarity=0.130 Sum_probs=97.4
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCC-CCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRK-DLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P-~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
.+.+|||+|||+|..+..+|+..+ ...++|+|+|+.+++.+++++.+.|+.|+.++++|+..+. .. .+++||.|+
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~-~~---~~~~fD~Il 192 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFG-AA---VPEMFDAIL 192 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHH-HH---STTCEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhh-hh---ccccCCEEE
Confidence 367999999999999999999864 5899999999999999999999999999999999998862 21 256899999
Q ss_pred EeCC---------CCCCCCcchh---hh--hhHHHHHHHHHhhccCCeEEEEEeCcH---HHHHHHHHHHHHcCCc
Q 014711 309 IQCP---------NPDFNRPEHR---WR--MVQRSLVEAVSDLLVHDGKVFLQSDIE---EVMLRMKQQFLEYGKG 367 (420)
Q Consensus 309 ~~fp---------dp~~k~~~~k---~R--l~~~~~l~~i~~~LkpgG~l~~~td~~---~~~~~~~~~l~~~g~~ 367 (420)
+.-| +|..+..... .. -.+.++|+.+.+.|||||+|++.|-.. .--+.+...+++++-+
T Consensus 193 ~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~~~Ene~vv~~~l~~~~~~ 268 (479)
T 2frx_A 193 LDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQEENEAVCLWLKETYPDA 268 (479)
T ss_dssp EECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCSSTTTHHHHHHHHHHSTTT
T ss_pred ECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCCcccCHHHHHHHHHHCCCc
Confidence 8622 1110000000 01 134689999999999999999986321 1112234455666543
No 203
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.24 E-value=4.5e-11 Score=118.23 Aligned_cols=104 Identities=17% Similarity=0.253 Sum_probs=82.1
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCC-CcEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGI-TNGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l-~nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
++.+|||||||+|.++..+++. +..+++|+|+|+ +++.|++++..+++ .+++++++|+.++ +.+++++|.|+
T Consensus 64 ~~~~VLDiGcGtG~ls~~la~~-g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~-----~~~~~~~D~Iv 136 (340)
T 2fyt_A 64 KDKVVLDVGCGTGILSMFAAKA-GAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEV-----HLPVEKVDVII 136 (340)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-TCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTS-----CCSCSCEEEEE
T ss_pred CCCEEEEeeccCcHHHHHHHHc-CCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHh-----cCCCCcEEEEE
Confidence 4679999999999999999987 456999999997 99999999998888 6899999999875 12457899998
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEE
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVF 345 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~ 345 (420)
+... ++.. ++. -.-+.++..+.++|||||.++
T Consensus 137 s~~~-~~~l--~~~--~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 137 SEWM-GYFL--LFE--SMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp ECCC-BTTB--TTT--CHHHHHHHHHHHHEEEEEEEE
T ss_pred EcCc-hhhc--cCH--HHHHHHHHHHHhhcCCCcEEE
Confidence 7531 1110 010 012478999999999999987
No 204
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.24 E-value=2.4e-11 Score=112.51 Aligned_cols=98 Identities=19% Similarity=0.221 Sum_probs=80.6
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
++.+|||||||+|.++..+++.. .+++|+|+|+.+++.|++++...+ |+.++++|+.+.++ .+++||.|++
T Consensus 70 ~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~--~v~~~~~d~~~~~~-----~~~~fD~v~~ 140 (231)
T 1vbf_A 70 KGQKVLEIGTGIGYYTALIAEIV--DKVVSVEINEKMYNYASKLLSYYN--NIKLILGDGTLGYE-----EEKPYDRVVV 140 (231)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTCS--SEEEEESCGGGCCG-----GGCCEEEEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHHc--CEEEEEeCCHHHHHHHHHHHhhcC--CeEEEECCcccccc-----cCCCccEEEE
Confidence 46799999999999999999985 799999999999999999987666 89999999977321 2568999988
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCc
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI 350 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~ 350 (420)
..+-++ +...+.+.|+|||++++.+..
T Consensus 141 ~~~~~~--------------~~~~~~~~L~pgG~l~~~~~~ 167 (231)
T 1vbf_A 141 WATAPT--------------LLCKPYEQLKEGGIMILPIGV 167 (231)
T ss_dssp SSBBSS--------------CCHHHHHTEEEEEEEEEEECS
T ss_pred CCcHHH--------------HHHHHHHHcCCCcEEEEEEcC
Confidence 744332 224678899999999998754
No 205
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.24 E-value=4.1e-11 Score=115.22 Aligned_cols=120 Identities=13% Similarity=0.112 Sum_probs=94.3
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCc-EEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITN-GYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~n-v~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
++.+|||+|||+|.+++.+|+. ...+|+++|+++.+++.+++|++.+++.| +.++++|+.++. ..+.+|.|+
T Consensus 125 ~g~~VlD~~aG~G~~~i~~a~~-g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~------~~~~~D~Vi 197 (278)
T 3k6r_A 125 PDELVVDMFAGIGHLSLPIAVY-GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP------GENIADRIL 197 (278)
T ss_dssp TTCEEEETTCTTTTTTHHHHHH-TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC------CCSCEEEEE
T ss_pred CCCEEEEecCcCcHHHHHHHHh-cCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhc------cccCCCEEE
Confidence 4789999999999999999987 45789999999999999999999999975 999999998762 467899998
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeC---c---HHHHHHHHHHHHHcCCce
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSD---I---EEVMLRMKQQFLEYGKGK 368 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td---~---~~~~~~~~~~l~~~g~~~ 368 (420)
++.| . . ..+|+..+.++|||||.+++..- . ....+.+.+...+.|+..
T Consensus 198 ~~~p--~--~--------~~~~l~~a~~~lk~gG~ih~~~~~~e~~~~~~~~e~i~~~~~~~g~~v 251 (278)
T 3k6r_A 198 MGYV--V--R--------THEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDV 251 (278)
T ss_dssp ECCC--S--S--------GGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEE
T ss_pred ECCC--C--c--------HHHHHHHHHHHcCCCCEEEEEeeecccccchhHHHHHHHHHHHcCCcE
Confidence 8733 1 1 12688889999999999987531 1 122344555666777654
No 206
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.24 E-value=6.4e-11 Score=121.59 Aligned_cols=115 Identities=18% Similarity=0.115 Sum_probs=90.1
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCC-CeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKD-LNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~-~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
++.+|||+|||+|..+..+|+..++ ..++|+|+|+.+++.+++++.+.|+. +.++++|+.++. ..+ +++||.|+
T Consensus 101 ~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~-v~~~~~Da~~l~-~~~---~~~FD~Il 175 (464)
T 3m6w_A 101 PGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP-LAVTQAPPRALA-EAF---GTYFHRVL 175 (464)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC-CEEECSCHHHHH-HHH---CSCEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe-EEEEECCHHHhh-hhc---cccCCEEE
Confidence 4689999999999999999998764 79999999999999999999999998 999999998873 222 67899999
Q ss_pred EeCCCC----CCCCcchhh----------hhhHHHHHHHHHhhccCCeEEEEEeC
Q 014711 309 IQCPNP----DFNRPEHRW----------RMVQRSLVEAVSDLLVHDGKVFLQSD 349 (420)
Q Consensus 309 ~~fpdp----~~k~~~~k~----------Rl~~~~~l~~i~~~LkpgG~l~~~td 349 (420)
+.-|-- +.+..+.+. .-.+.++|+.+.+.|||||+|++.|-
T Consensus 176 ~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTC 230 (464)
T 3m6w_A 176 LDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTC 230 (464)
T ss_dssp EECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEES
T ss_pred ECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 863210 001111000 11347899999999999999998763
No 207
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.23 E-value=2.5e-11 Score=123.58 Aligned_cols=108 Identities=16% Similarity=0.082 Sum_probs=82.8
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHH-------HHHhHHhC--CCcEEEEEcChhhhhhhhhccC
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHC-------RDSLQLSG--ITNGYFIATNATSTFRSIVASY 300 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A-------~~~~~~~~--l~nv~~~~~Da~~~~~~~~~~~ 300 (420)
++.+|||||||+|.+++.+|+.++...|+|+|+++.+++.| ++++...| +.|++++++|....... +...
T Consensus 242 ~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~-~~~~ 320 (433)
T 1u2z_A 242 KGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNR-VAEL 320 (433)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHH-HHHH
T ss_pred CCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCccccccc-cccc
Confidence 46899999999999999999988888999999999999999 88888888 57999999865421000 1001
Q ss_pred CCeEeEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 301 PGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 301 ~~~~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
..+||.|+++..- + ..+ -+..|+++.+.|||||.+++.
T Consensus 321 ~~~FDvIvvn~~l-~--~~d------~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 321 IPQCDVILVNNFL-F--DED------LNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp GGGCSEEEECCTT-C--CHH------HHHHHHHHHTTCCTTCEEEES
T ss_pred cCCCCEEEEeCcc-c--ccc------HHHHHHHHHHhCCCCeEEEEe
Confidence 4579999986211 1 111 136789999999999999884
No 208
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.23 E-value=3.6e-11 Score=129.22 Aligned_cols=112 Identities=13% Similarity=0.124 Sum_probs=88.3
Q ss_pred CCCEEEEEcCCccHHHHHHHHhC-CCCeEEEEeCChHHHHHHHHHhHH------hCCCcEEEEEcChhhhhhhhhccCCC
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKR-KDLNFLGLEVNGKLVTHCRDSLQL------SGITNGYFIATNATSTFRSIVASYPG 302 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~-P~~~viGiDis~~~i~~A~~~~~~------~~l~nv~~~~~Da~~~~~~~~~~~~~ 302 (420)
.+.+|||||||+|.++..|++.. |..+|+|+|+|+.+++.|++++.. .++.|++|+++|+.++ +..++
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dL-----p~~d~ 795 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEF-----DSRLH 795 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSC-----CTTSC
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhC-----CcccC
Confidence 46899999999999999999997 568999999999999999997653 3667999999999886 22468
Q ss_pred eEeEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHH
Q 014711 303 KLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEV 353 (420)
Q Consensus 303 ~~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~ 353 (420)
+||.|++...-.+... -....+++++.++|||| .+++.+.+..+
T Consensus 796 sFDlVV~~eVLeHL~d------p~l~~~L~eI~RvLKPG-~LIISTPN~ey 839 (950)
T 3htx_A 796 DVDIGTCLEVIEHMEE------DQACEFGEKVLSLFHPK-LLIVSTPNYEF 839 (950)
T ss_dssp SCCEEEEESCGGGSCH------HHHHHHHHHHHHTTCCS-EEEEEECBGGG
T ss_pred CeeEEEEeCchhhCCh------HHHHHHHHHHHHHcCCC-EEEEEecCchh
Confidence 8999998743222111 01136899999999999 88887766544
No 209
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.22 E-value=3.5e-11 Score=113.83 Aligned_cols=101 Identities=16% Similarity=0.204 Sum_probs=79.5
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
++.+|||||||+|.++..+++. ..+++|+|+|+.+++.|+++.. .+ ++++|+.++ +.++++||.|++
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~----~~--~~~~d~~~~-----~~~~~~fD~v~~ 120 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER--GFEVVLVDPSKEMLEVAREKGV----KN--VVEAKAEDL-----PFPSGAFEAVLA 120 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHHTC----SC--EEECCTTSC-----CSCTTCEEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHc--CCeEEEEeCCHHHHHHHHhhcC----CC--EEECcHHHC-----CCCCCCEEEEEE
Confidence 4678999999999999999987 5799999999999999988764 23 888998775 224788999987
Q ss_pred eCCC-CCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcH
Q 014711 310 QCPN-PDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIE 351 (420)
Q Consensus 310 ~fpd-p~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~ 351 (420)
...- .+..+ ...+++++.++|||||.+++.+.+.
T Consensus 121 ~~~~~~~~~~--------~~~~l~~~~~~LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 121 LGDVLSYVEN--------KDKAFSEIRRVLVPDGLLIATVDNF 155 (260)
T ss_dssp CSSHHHHCSC--------HHHHHHHHHHHEEEEEEEEEEEEBH
T ss_pred cchhhhcccc--------HHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 5311 11111 1489999999999999999987554
No 210
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.22 E-value=4.5e-11 Score=118.51 Aligned_cols=105 Identities=17% Similarity=0.270 Sum_probs=84.6
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCC-cEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGIT-NGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~-nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
++.+|||||||+|.++..+++.+|+.+++++|+ +.+++.|++++...++. +++|+++|+.+. + +..+|.|+
T Consensus 183 ~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~---~~~~D~v~ 254 (360)
T 1tw3_A 183 NVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEP----L---PRKADAII 254 (360)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSC----C---SSCEEEEE
T ss_pred cCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCC----C---CCCccEEE
Confidence 467999999999999999999999999999999 99999999999888876 799999999753 1 23499998
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEe
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 348 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~t 348 (420)
+...-.++.+ .....+++++.++|+|||++++..
T Consensus 255 ~~~vl~~~~~------~~~~~~l~~~~~~L~pgG~l~i~e 288 (360)
T 1tw3_A 255 LSFVLLNWPD------HDAVRILTRCAEALEPGGRILIHE 288 (360)
T ss_dssp EESCGGGSCH------HHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EcccccCCCH------HHHHHHHHHHHHhcCCCcEEEEEE
Confidence 8632211100 011379999999999999998753
No 211
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.21 E-value=4.5e-11 Score=110.04 Aligned_cols=118 Identities=14% Similarity=0.172 Sum_probs=88.8
Q ss_pred CCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEEe
Q 014711 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQ 310 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~~ 310 (420)
+.+|||||||+|.++..+++. +|+|+|+.+++.|+++ ++.++++|+.++ +.++++||.|++.
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a~~~-------~~~~~~~d~~~~-----~~~~~~fD~v~~~ 109 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIARKR-------GVFVLKGTAENL-----PLKDESFDFALMV 109 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHHHHT-------TCEEEECBTTBC-----CSCTTCEEEEEEE
T ss_pred CCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHHHhc-------CCEEEEcccccC-----CCCCCCeeEEEEc
Confidence 578999999999999998765 9999999999999876 688999998765 2246789999987
Q ss_pred CCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHH-----------------------HHHHHHHHHHHcCCc
Q 014711 311 CPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEE-----------------------VMLRMKQQFLEYGKG 367 (420)
Q Consensus 311 fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~-----------------------~~~~~~~~l~~~g~~ 367 (420)
..-.+..+ ...+++.+.++|+|||.+++.+.... ..+++.+.+++.||.
T Consensus 110 ~~l~~~~~--------~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~ 181 (219)
T 1vlm_A 110 TTICFVDD--------PERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFE 181 (219)
T ss_dssp SCGGGSSC--------HHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCE
T ss_pred chHhhccC--------HHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCe
Confidence 43222111 13799999999999999998742110 124567778888887
Q ss_pred eeEeecc
Q 014711 368 KLVLVQD 374 (420)
Q Consensus 368 ~~~~~~D 374 (420)
.+.+..+
T Consensus 182 ~~~~~~~ 188 (219)
T 1vlm_A 182 EFKVVQT 188 (219)
T ss_dssp EEEEEEE
T ss_pred EEEEecc
Confidence 7655444
No 212
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.21 E-value=5.5e-11 Score=117.49 Aligned_cols=106 Identities=15% Similarity=0.221 Sum_probs=85.6
Q ss_pred CCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCC-cEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGIT-NGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~-nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
..+|||||||+|.++..+++++|+.+++++|+ +.+++.|++++.+.++. +++++.+|+.+.. .. .+..+|.|++
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~---~~~~~D~v~~ 254 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDAR-NF---EGGAADVVML 254 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGG-GG---TTCCEEEEEE
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCc-cc---CCCCccEEEE
Confidence 68999999999999999999999999999999 88999999999888875 5999999998752 11 2556999988
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
...-.++.+ . ....+++.+++.|+|||+|++.
T Consensus 255 ~~vlh~~~~--~----~~~~~l~~~~~~L~pgG~l~i~ 286 (352)
T 3mcz_A 255 NDCLHYFDA--R----EAREVIGHAAGLVKPGGALLIL 286 (352)
T ss_dssp ESCGGGSCH--H----HHHHHHHHHHHTEEEEEEEEEE
T ss_pred ecccccCCH--H----HHHHHHHHHHHHcCCCCEEEEE
Confidence 632211111 0 1137999999999999999885
No 213
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.20 E-value=7.2e-12 Score=119.16 Aligned_cols=136 Identities=12% Similarity=0.002 Sum_probs=91.1
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhC-----------------------------CC
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSG-----------------------------IT 280 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~-----------------------------l~ 280 (420)
.+.+|||||||+|.++..++... ..+|+|+|+|+.|++.|++++.... ..
T Consensus 55 ~g~~vLDiGCG~G~~~~~~~~~~-~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (263)
T 2a14_A 55 QGDTLIDIGSGPTIYQVLAACDS-FQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRA 133 (263)
T ss_dssp CEEEEEESSCTTCCGGGTTGGGT-EEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHH
T ss_pred CCceEEEeCCCccHHHHHHHHhh-hcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHh
Confidence 45789999999998877766552 2379999999999999998764421 01
Q ss_pred cEE-EEEcChhhhhhhhhccCCCeEeEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEe--CcH------
Q 014711 281 NGY-FIATNATSTFRSIVASYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS--DIE------ 351 (420)
Q Consensus 281 nv~-~~~~Da~~~~~~~~~~~~~~~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~t--d~~------ 351 (420)
++. ++++|+.+..+ .-+...++||.|+.++.-.+... +.. -...++++++++|||||+|++.+ +..
T Consensus 134 ~i~~~~~~D~~~~~~-~~~~~~~~fD~V~~~~~l~~i~~-~~~---~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~ 208 (263)
T 2a14_A 134 AVKRVLKCDVHLGNP-LAPAVLPLADCVLTLLAMECACC-SLD---AYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGK 208 (263)
T ss_dssp HEEEEEECCTTSSST-TTTCCCCCEEEEEEESCHHHHCS-SHH---HHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETT
T ss_pred hhheEEeccccCCCC-CCccccCCCCEeeehHHHHHhcC-CHH---HHHHHHHHHHHHcCCCcEEEEEEeecCccceeCC
Confidence 354 89999987421 00012568999998753211000 000 11378999999999999999974 110
Q ss_pred -------HHHHHHHHHHHHcCCceeEe
Q 014711 352 -------EVMLRMKQQFLEYGKGKLVL 371 (420)
Q Consensus 352 -------~~~~~~~~~l~~~g~~~~~~ 371 (420)
--.+++.+.+.+.||....+
T Consensus 209 ~~~~~~~~~~~~l~~~l~~aGF~i~~~ 235 (263)
T 2a14_A 209 REFSCVALEKGEVEQAVLDAGFDIEQL 235 (263)
T ss_dssp EEEECCCCCHHHHHHHHHHTTEEEEEE
T ss_pred eEeeccccCHHHHHHHHHHCCCEEEEE
Confidence 01346788899999876543
No 214
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.20 E-value=1.3e-10 Score=119.20 Aligned_cols=133 Identities=19% Similarity=0.155 Sum_probs=97.3
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCC-CeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKD-LNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~-~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
++.+|||+|||+|..+..+++..++ .+++|+|+|+.+++.+++++.+.|++|+.++++|+.++. ..+ .+++||.|+
T Consensus 259 ~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~-~~~--~~~~fD~Vl 335 (450)
T 2yxl_A 259 PGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAP-EII--GEEVADKVL 335 (450)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCS-SSS--CSSCEEEEE
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcc-hhh--ccCCCCEEE
Confidence 4679999999999999999999877 899999999999999999999999999999999998762 112 347899999
Q ss_pred EeCCCC----CCCCcchh--------hh--hhHHHHHHHHHhhccCCeEEEEEeCc---HHHHHHHHHHHHHcC
Q 014711 309 IQCPNP----DFNRPEHR--------WR--MVQRSLVEAVSDLLVHDGKVFLQSDI---EEVMLRMKQQFLEYG 365 (420)
Q Consensus 309 ~~fpdp----~~k~~~~k--------~R--l~~~~~l~~i~~~LkpgG~l~~~td~---~~~~~~~~~~l~~~g 365 (420)
+.-|-. +.+..+.+ .. -.+..+++.+.+.|||||++++.|-. ..-.+.+...+++++
T Consensus 336 ~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~~ene~~v~~~l~~~~ 409 (450)
T 2yxl_A 336 LDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFKEENEKNIRWFLNVHP 409 (450)
T ss_dssp EECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHHHHHHCS
T ss_pred EcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCChhhHHHHHHHHHHhCC
Confidence 863210 11111100 01 12368999999999999999987632 111223445566763
No 215
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.20 E-value=4e-11 Score=118.41 Aligned_cols=111 Identities=14% Similarity=0.236 Sum_probs=89.7
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCC-CcEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGI-TNGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l-~nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
.+.+|||+|||+|.+++. |+ ...+++|+|+|+.+++.|++|+..+++ .|++++++|+.++ . .+||.|+
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~--~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~-------~-~~fD~Vi 263 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CK--NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREV-------D-VKGNRVI 263 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TT--TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGC-------C-CCEEEEE
T ss_pred CCCEEEEccCccCHHHHh-cc--CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHh-------c-CCCcEEE
Confidence 468999999999999999 87 478999999999999999999999998 5899999999876 2 6799998
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHHHHHHHHHHHHc
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEY 364 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~~~~~~~~l~~~ 364 (420)
++. |.. ..+++..+.+.|+|||.+++.+.... .+...+.+.+.
T Consensus 264 ~dp--P~~----------~~~~l~~~~~~L~~gG~l~~~~~~~~-~~~~~~~l~~~ 306 (336)
T 2yx1_A 264 MNL--PKF----------AHKFIDKALDIVEEGGVIHYYTIGKD-FDKAIKLFEKK 306 (336)
T ss_dssp ECC--TTT----------GGGGHHHHHHHEEEEEEEEEEEEESS-SHHHHHHHHHH
T ss_pred ECC--cHh----------HHHHHHHHHHHcCCCCEEEEEEeecC-chHHHHHHHHh
Confidence 852 221 12688999999999999988654333 45566666655
No 216
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.20 E-value=1.8e-10 Score=117.47 Aligned_cols=132 Identities=12% Similarity=0.191 Sum_probs=97.5
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
++..|||+|||+|..+..+++..|+..++|+|+|+.+++.+++++.+.++ ++.++++|+.+.. ..+ .+++||.|++
T Consensus 246 ~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~-~~~~~~~D~~~~~-~~~--~~~~fD~Vl~ 321 (429)
T 1sqg_A 246 NGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM-KATVKQGDGRYPS-QWC--GEQQFDRILL 321 (429)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTC-CCEEEECCTTCTH-HHH--TTCCEEEEEE
T ss_pred CcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCC-CeEEEeCchhhch-hhc--ccCCCCEEEE
Confidence 46799999999999999999999889999999999999999999998887 5799999998763 223 3578999998
Q ss_pred eCCCC----CCCCcchhh----------hhhHHHHHHHHHhhccCCeEEEEEeCc---HHHHHHHHHHHHHcC
Q 014711 310 QCPNP----DFNRPEHRW----------RMVQRSLVEAVSDLLVHDGKVFLQSDI---EEVMLRMKQQFLEYG 365 (420)
Q Consensus 310 ~fpdp----~~k~~~~k~----------Rl~~~~~l~~i~~~LkpgG~l~~~td~---~~~~~~~~~~l~~~g 365 (420)
+-|-. +.+..+.+. .-.+.++++.+.+.|||||++++.|-. ....+.+...+++++
T Consensus 322 D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~~ene~~v~~~l~~~~ 394 (429)
T 1sqg_A 322 DAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTA 394 (429)
T ss_dssp ECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCGGGTHHHHHHHHHHCT
T ss_pred eCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCChhhHHHHHHHHHHhCC
Confidence 73311 001111000 113468999999999999999998721 122233455666664
No 217
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.20 E-value=5.4e-11 Score=110.21 Aligned_cols=101 Identities=17% Similarity=0.235 Sum_probs=79.4
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
++.+|||||||+|.++..+++..+ +++|+|+|+.+++.|+++. +++.++++|+.++ + .++++|.|++
T Consensus 40 ~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~~~-----~~~~~~~~d~~~~-----~-~~~~~D~v~~ 106 (239)
T 3bxo_A 40 EASSLLDVACGTGTHLEHFTKEFG--DTAGLELSEDMLTHARKRL-----PDATLHQGDMRDF-----R-LGRKFSAVVS 106 (239)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHHS--EEEEEESCHHHHHHHHHHC-----TTCEEEECCTTTC-----C-CSSCEEEEEE
T ss_pred CCCeEEEecccCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhC-----CCCEEEECCHHHc-----c-cCCCCcEEEE
Confidence 468999999999999999999975 8999999999999998874 4789999999875 1 2578999986
Q ss_pred eCC-CCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEe
Q 014711 310 QCP-NPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 348 (420)
Q Consensus 310 ~fp-dp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~t 348 (420)
.+. -.+... .. ....+++.+.++|||||.+++.+
T Consensus 107 ~~~~~~~~~~--~~---~~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 107 MFSSVGYLKT--TE---ELGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp CTTGGGGCCS--HH---HHHHHHHHHHHTEEEEEEEEECC
T ss_pred cCchHhhcCC--HH---HHHHHHHHHHHhcCCCeEEEEEe
Confidence 431 111111 01 11479999999999999999864
No 218
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.20 E-value=8.4e-11 Score=107.83 Aligned_cols=104 Identities=12% Similarity=0.110 Sum_probs=80.0
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
++.+|||+|||+|.++..+++. + .+++|+|+|+.+++.++++. ..++++|+.+.. .+.++++||.|++
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~-~-~~~~~~D~~~~~~~~~~~~~-------~~~~~~d~~~~~---~~~~~~~fD~v~~ 99 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIKEN-G-TRVSGIEAFPEAAEQAKEKL-------DHVVLGDIETMD---MPYEEEQFDCVIF 99 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHHTT-T-CEEEEEESSHHHHHHHHTTS-------SEEEESCTTTCC---CCSCTTCEEEEEE
T ss_pred CCCcEEEeCCCCCHHHHHHHhc-C-CeEEEEeCCHHHHHHHHHhC-------CcEEEcchhhcC---CCCCCCccCEEEE
Confidence 4689999999999999999988 4 89999999999999887654 268899987641 1224678999988
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHH
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEV 353 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~ 353 (420)
...-.+..+ + ..+++++.+.|+|||.+++.+.+...
T Consensus 100 ~~~l~~~~~--~------~~~l~~~~~~L~~gG~l~~~~~~~~~ 135 (230)
T 3cc8_A 100 GDVLEHLFD--P------WAVIEKVKPYIKQNGVILASIPNVSH 135 (230)
T ss_dssp ESCGGGSSC--H------HHHHHHTGGGEEEEEEEEEEEECTTS
T ss_pred CChhhhcCC--H------HHHHHHHHHHcCCCCEEEEEeCCcch
Confidence 743222111 1 37999999999999999998754433
No 219
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.20 E-value=1.7e-10 Score=104.53 Aligned_cols=112 Identities=13% Similarity=0.226 Sum_probs=83.1
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
.+.+|||+|||+|.++..+++. +..+++|+|+|+.+++.|++++. |++++++|+.++ +++||.|++
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~-----~~~~~~~d~~~~--------~~~~D~v~~ 116 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYLL-GAESVTAFDIDPDAIETAKRNCG-----GVNFMVADVSEI--------SGKYDTWIM 116 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHHT-TBSEEEEEESCHHHHHHHHHHCT-----TSEEEECCGGGC--------CCCEEEEEE
T ss_pred CCCEEEEEeCCccHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhcC-----CCEEEECcHHHC--------CCCeeEEEE
Confidence 4678999999999999999987 55689999999999999999875 789999999875 368999998
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHHHHHHHHHHHHcC
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYG 365 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~~~~~~~~l~~~g 365 (420)
+ .|++...+. ....+++.+.+.| |.+++.++ +....++.+.+.+.|
T Consensus 117 ~--~p~~~~~~~----~~~~~l~~~~~~~---g~~~~~~~-~~~~~~~~~~~~~~g 162 (200)
T 1ne2_A 117 N--PPFGSVVKH----SDRAFIDKAFETS---MWIYSIGN-AKARDFLRREFSARG 162 (200)
T ss_dssp C--CCC-----------CHHHHHHHHHHE---EEEEEEEE-GGGHHHHHHHHHHHE
T ss_pred C--CCchhccCc----hhHHHHHHHHHhc---CcEEEEEc-CchHHHHHHHHHHCC
Confidence 7 343222111 1237888899988 44555443 333566777788777
No 220
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.19 E-value=3.1e-11 Score=113.22 Aligned_cols=115 Identities=13% Similarity=0.100 Sum_probs=85.1
Q ss_pred CCEEEEEcCCccHHHHHHHHh----CCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhh--hhhhhccCCCeE
Q 014711 231 QPLVVDIGSGNGLFLLGMARK----RKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATST--FRSIVASYPGKL 304 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~----~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~--~~~~~~~~~~~~ 304 (420)
+.+|||||||+|.++..||+. .|+.+|+|+|+|+.+++.|+. . ..|++++++|+.+. ++ .+ .+.+|
T Consensus 82 ~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~----~-~~~v~~~~gD~~~~~~l~-~~--~~~~f 153 (236)
T 2bm8_A 82 PRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS----D-MENITLHQGDCSDLTTFE-HL--REMAH 153 (236)
T ss_dssp CSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG----G-CTTEEEEECCSSCSGGGG-GG--SSSCS
T ss_pred CCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc----c-CCceEEEECcchhHHHHH-hh--ccCCC
Confidence 578999999999999999997 789999999999999988861 1 26899999999874 22 11 23479
Q ss_pred eEEEEeCCCCCCCCcchhhhhhHHHHHHHHHh-hccCCeEEEEEeCcH----HH-HHHHHHHHHHcC
Q 014711 305 ILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSD-LLVHDGKVFLQSDIE----EV-MLRMKQQFLEYG 365 (420)
Q Consensus 305 d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~-~LkpgG~l~~~td~~----~~-~~~~~~~l~~~g 365 (420)
|.|++... + . ..+.++.++.+ .|||||+|++. |.. .+ .+.+.+.+++++
T Consensus 154 D~I~~d~~---~----~----~~~~~l~~~~r~~LkpGG~lv~~-d~~~~~~~~~~~~~~~~l~~~~ 208 (236)
T 2bm8_A 154 PLIFIDNA---H----A----NTFNIMKWAVDHLLEEGDYFIIE-DMIPYWYRYAPQLFSEYLGAFR 208 (236)
T ss_dssp SEEEEESS---C----S----SHHHHHHHHHHHTCCTTCEEEEC-SCHHHHHHHCHHHHHHHHHTTT
T ss_pred CEEEECCc---h----H----hHHHHHHHHHHhhCCCCCEEEEE-eCcccccccCHHHHHHHHHhCc
Confidence 99988643 1 1 12478999997 99999999984 221 11 124556666664
No 221
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.19 E-value=1.8e-11 Score=117.61 Aligned_cols=137 Identities=12% Similarity=0.044 Sum_probs=89.4
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHh-----------------CC-------------
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLS-----------------GI------------- 279 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~-----------------~l------------- 279 (420)
.+.+|||||||+|.+.. ++...+..+|+|+|+|+.|++.|++++.+. +.
T Consensus 71 ~~~~vLDiGcG~G~~~~-l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQL-LSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp CCSEEEEETCTTCCGGG-TTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHH-HhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 46789999999999544 444445679999999999999998865421 10
Q ss_pred CcEEEEEcChhhhhhh-hhccCCCeEeEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCc--------
Q 014711 280 TNGYFIATNATSTFRS-IVASYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI-------- 350 (420)
Q Consensus 280 ~nv~~~~~Da~~~~~~-~~~~~~~~~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~-------- 350 (420)
..+.++++|+.+.++- ....++++||.|++++.-.|.... .. -...+|+++.++|||||+|++....
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~--~~--~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~ 225 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPD--LA--SFQRALDHITTLLRPGGHLLLIGALEESWYLAG 225 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSS--HH--HHHHHHHHHHTTEEEEEEEEEEEEESCCEEEET
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCC--HH--HHHHHHHHHHHhcCCCCEEEEEEecCcceEEcC
Confidence 0267888898773220 000135679999988532221000 00 1147899999999999999985200
Q ss_pred -------HHHHHHHHHHHHHcCCceeEe
Q 014711 351 -------EEVMLRMKQQFLEYGKGKLVL 371 (420)
Q Consensus 351 -------~~~~~~~~~~l~~~g~~~~~~ 371 (420)
..-.+++.+.+++.||..+.+
T Consensus 226 ~~~~~~~~~~~~~l~~~l~~aGf~~~~~ 253 (289)
T 2g72_A 226 EARLTVVPVSEEEVREALVRSGYKVRDL 253 (289)
T ss_dssp TEEEECCCCCHHHHHHHHHHTTEEEEEE
T ss_pred CeeeeeccCCHHHHHHHHHHcCCeEEEe
Confidence 001456778888888876543
No 222
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.19 E-value=6.2e-11 Score=113.00 Aligned_cols=105 Identities=11% Similarity=0.122 Sum_probs=73.7
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
++.+|||||||+|.++..||++ ..+|+|+|+|+.|++.|++++... +++.|+.++........+++||.|++
T Consensus 45 ~g~~VLDlGcGtG~~a~~La~~--g~~V~gvD~S~~ml~~Ar~~~~~~------~v~~~~~~~~~~~~~~~~~~fD~Vv~ 116 (261)
T 3iv6_A 45 PGSTVAVIGASTRFLIEKALER--GASVTVFDFSQRMCDDLAEALADR------CVTIDLLDITAEIPKELAGHFDFVLN 116 (261)
T ss_dssp TTCEEEEECTTCHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTSSS------CCEEEECCTTSCCCGGGTTCCSEEEE
T ss_pred CcCEEEEEeCcchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHhc------cceeeeeecccccccccCCCccEEEE
Confidence 4679999999999999999987 579999999999999999987644 22233322210000002568999998
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeC
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSD 349 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td 349 (420)
++.-.++... -.+.+++.+.++| |||++++...
T Consensus 117 ~~~l~~~~~~------~~~~~l~~l~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 117 DRLINRFTTE------EARRACLGMLSLV-GSGTVRASVK 149 (261)
T ss_dssp ESCGGGSCHH------HHHHHHHHHHHHH-TTSEEEEEEE
T ss_pred hhhhHhCCHH------HHHHHHHHHHHhC-cCcEEEEEec
Confidence 7432211111 1146889999999 9999999764
No 223
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.19 E-value=3.9e-11 Score=114.52 Aligned_cols=111 Identities=8% Similarity=-0.061 Sum_probs=89.1
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHH----hCCCcEEEEEcChhhhhhhhhccCCCeEe
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQL----SGITNGYFIATNATSTFRSIVASYPGKLI 305 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~----~~l~nv~~~~~Da~~~~~~~~~~~~~~~d 305 (420)
++.+|||||||+|..+..+++. + .+++++|+++.+++.|++++.. ..-++++++++|+.++ . ++||
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~-------~-~~fD 141 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLD-------I-KKYD 141 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSC-------C-CCEE
T ss_pred CCCEEEEEeCCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHH-------H-hhCC
Confidence 4578999999999999999988 7 8999999999999999887643 1235799999999775 2 6799
Q ss_pred EEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcH----HHHHHHHHHHHH
Q 014711 306 LVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIE----EVMLRMKQQFLE 363 (420)
Q Consensus 306 ~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~----~~~~~~~~~l~~ 363 (420)
.|++..+||. .+++.+.+.|+|||.+++.+... .....+.+.+.+
T Consensus 142 ~Ii~d~~dp~-------------~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~ 190 (262)
T 2cmg_A 142 LIFCLQEPDI-------------HRIDGLKRMLKEDGVFISVAKHPLLEHVSMQNALKNMGG 190 (262)
T ss_dssp EEEESSCCCH-------------HHHHHHHTTEEEEEEEEEEEECTTTCHHHHHHHHHHHHT
T ss_pred EEEECCCChH-------------HHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHH
Confidence 9999877774 58999999999999999975432 234445555554
No 224
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.18 E-value=1.4e-11 Score=116.00 Aligned_cols=137 Identities=12% Similarity=0.011 Sum_probs=95.7
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCC-----------------------------C
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGI-----------------------------T 280 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l-----------------------------~ 280 (420)
.+.+|||||||+|.++..+++..+ .+|+|+|+|+.+++.|++++...+. .
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 134 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSACESF-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRR 134 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHhhccc-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhh
Confidence 357899999999999999998865 5899999999999999988754321 1
Q ss_pred cE-EEEEcChhhhhhhhhccCCCeEeEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCc---------
Q 014711 281 NG-YFIATNATSTFRSIVASYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI--------- 350 (420)
Q Consensus 281 nv-~~~~~Da~~~~~~~~~~~~~~~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~--------- 350 (420)
++ .++++|+.+... ..+...++||.|++.+.-.+... +. -....+++++.++|||||+|++..-.
T Consensus 135 ~v~~~~~~d~~~~~~-~~~~~~~~fD~v~~~~~l~~~~~-~~---~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~ 209 (265)
T 2i62_A 135 AIKQVLKCDVTQSQP-LGGVSLPPADCLLSTLCLDAACP-DL---PAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIGE 209 (265)
T ss_dssp HEEEEEECCTTSSST-TTTCCCCCEEEEEEESCHHHHCS-SH---HHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETT
T ss_pred hheeEEEeeeccCCC-CCccccCCccEEEEhhhhhhhcC-Ch---HHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcCC
Confidence 28 999999987521 00001278999988742110000 00 01247899999999999999986410
Q ss_pred ------HHHHHHHHHHHHHcCCceeEee
Q 014711 351 ------EEVMLRMKQQFLEYGKGKLVLV 372 (420)
Q Consensus 351 ------~~~~~~~~~~l~~~g~~~~~~~ 372 (420)
.--.+++.+.+.+.||..+.+.
T Consensus 210 ~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 237 (265)
T 2i62_A 210 QKFSSLPLGWETVRDAVEEAGYTIEQFE 237 (265)
T ss_dssp EEEECCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred ccccccccCHHHHHHHHHHCCCEEEEEE
Confidence 0013467888999998876543
No 225
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.18 E-value=9.9e-11 Score=117.35 Aligned_cols=105 Identities=17% Similarity=0.227 Sum_probs=82.8
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCc-EEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITN-GYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~n-v~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
.+.+|||||||+|.++..++++ ...+|+|+|+| .+++.|++++..+++.+ ++++++|+.++. .+++||.|+
T Consensus 63 ~~~~VLDlGcGtG~ls~~la~~-g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~------~~~~~D~Iv 134 (376)
T 3r0q_C 63 EGKTVLDVGTGSGILAIWSAQA-GARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDIS------LPEKVDVII 134 (376)
T ss_dssp TTCEEEEESCTTTHHHHHHHHT-TCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCC------CSSCEEEEE
T ss_pred CCCEEEEeccCcCHHHHHHHhc-CCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcC------cCCcceEEE
Confidence 4689999999999999999987 33599999999 99999999999998865 999999998762 247899998
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
+.....+ .... -....+++.+.++|||||.|++.
T Consensus 135 ~~~~~~~-l~~e----~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 135 SEWMGYF-LLRE----SMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp ECCCBTT-BTTT----CTHHHHHHHHHHHEEEEEEEESS
T ss_pred EcChhhc-ccch----HHHHHHHHHHHhhCCCCeEEEEe
Confidence 8431111 1100 01247899999999999999763
No 226
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.17 E-value=2.1e-10 Score=123.84 Aligned_cols=131 Identities=13% Similarity=0.166 Sum_probs=98.3
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCC--cEEEEEcChhhhhhhhhccCCCeEeEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGIT--NGYFIATNATSTFRSIVASYPGKLILV 307 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~--nv~~~~~Da~~~~~~~~~~~~~~~d~i 307 (420)
.+.+|||+|||+|.+++.+|+.. ..+|+++|+|+.+++.|++|+..++++ |++++++|+.++++. ..++||.|
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~g-a~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~----~~~~fD~I 613 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGG-ARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLRE----ANEQFDLI 613 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHH----CCCCEEEE
T ss_pred CCCcEEEeeechhHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHh----cCCCccEE
Confidence 46899999999999999999853 347999999999999999999999987 799999999987532 35789999
Q ss_pred EEeCCCCCCCCcch-----hhhhhHHHHHHHHHhhccCCeEEEEEeCcHHHHHHHHHHHHHcCCce
Q 014711 308 SIQCPNPDFNRPEH-----RWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGK 368 (420)
Q Consensus 308 ~~~fpdp~~k~~~~-----k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~~~~~~~~l~~~g~~~ 368 (420)
+++ .|.+..... ...-.+.+++..+.++|+|||.|++.+....+ ..-.+.+.+.++..
T Consensus 614 i~D--PP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~~~-~~~~~~l~~~g~~~ 676 (703)
T 3v97_A 614 FID--PPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGF-RMDLDGLAKLGLKA 676 (703)
T ss_dssp EEC--CCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCTTC-CCCHHHHHHTTEEE
T ss_pred EEC--CccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCccc-ccCHHHHHHcCCce
Confidence 886 233221100 01112368899999999999999998865332 22355677777653
No 227
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.16 E-value=1.7e-10 Score=114.21 Aligned_cols=128 Identities=13% Similarity=0.187 Sum_probs=93.7
Q ss_pred CCCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhC---C-----CcEEEEEcChhhhhhhhhccC
Q 014711 229 PAQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSG---I-----TNGYFIATNATSTFRSIVASY 300 (420)
Q Consensus 229 ~~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~---l-----~nv~~~~~Da~~~~~~~~~~~ 300 (420)
+++.+||+||||+|.++..++++.+ .+++++|+++.+++.|++++...+ + .+++++++|+..++..... .
T Consensus 187 p~pkrVL~IGgG~G~~arellk~~~-~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~-~ 264 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAK-E 264 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHH-H
T ss_pred CCCCEEEEEECChhHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhc-c
Confidence 3578999999999999999988755 899999999999999999875321 2 2699999999998654210 2
Q ss_pred CCeEeEEEEeCCC-CCCCCcchhhhhhHHHHHHHH----HhhccCCeEEEEEeCcHHHHHHHHHHHH
Q 014711 301 PGKLILVSIQCPN-PDFNRPEHRWRMVQRSLVEAV----SDLLVHDGKVFLQSDIEEVMLRMKQQFL 362 (420)
Q Consensus 301 ~~~~d~i~~~fpd-p~~k~~~~k~Rl~~~~~l~~i----~~~LkpgG~l~~~td~~~~~~~~~~~l~ 362 (420)
++.||.|++..|+ |.-... . ++...+|++.+ .++|+|||.+++.+..... .++...++
T Consensus 265 ~~~fDvII~D~~d~P~~~~p--~-~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~~~-~e~~~~~~ 327 (364)
T 2qfm_A 265 GREFDYVINDLTAVPISTSP--E-EDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNL-TEALSLYE 327 (364)
T ss_dssp TCCEEEEEEECCSSCCCCC-------CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTC-HHHHHHHH
T ss_pred CCCceEEEECCCCcccCcCc--h-hhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCcch-HHHHHHHH
Confidence 5689999998877 642221 1 24556777777 9999999999998755433 33344443
No 228
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.16 E-value=1.1e-10 Score=115.83 Aligned_cols=104 Identities=13% Similarity=0.166 Sum_probs=81.5
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCC-CcEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGI-TNGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l-~nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
++.+|||||||+|.++..+++. +..+|+|+|+|+ +++.|++++..+++ .+++++++|+.++. .++++|.|+
T Consensus 50 ~~~~VLDiGcGtG~ls~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~------~~~~~D~Iv 121 (348)
T 2y1w_A 50 KDKIVLDVGCGSGILSFFAAQA-GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVS------LPEQVDIII 121 (348)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCC------CSSCEEEEE
T ss_pred CcCEEEEcCCCccHHHHHHHhC-CCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCC------CCCceeEEE
Confidence 3679999999999999999886 567999999996 88999999988888 58999999998751 246899998
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
+..+.-+.... -..+.+..+.+.|||||.+++.
T Consensus 122 s~~~~~~~~~~------~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 122 SEPMGYMLFNE------RMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp ECCCBTTBTTT------SHHHHHHHGGGGEEEEEEEESC
T ss_pred EeCchhcCChH------HHHHHHHHHHhhcCCCeEEEEe
Confidence 86332111110 0136777889999999999864
No 229
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.16 E-value=4.7e-10 Score=114.48 Aligned_cols=125 Identities=18% Similarity=0.196 Sum_probs=94.8
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
.+..|||+|||+|.+++.||+. ..+|+|+|+|+.+++.|++++..++++|++|+++|+.+.+... +..+++||.|++
T Consensus 286 ~~~~VLDlgcG~G~~~~~la~~--~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~-~~~~~~fD~Vv~ 362 (433)
T 1uwv_A 286 PEDRVLDLFCGMGNFTLPLATQ--AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQ-PWAKNGFDKVLL 362 (433)
T ss_dssp TTCEEEEESCTTTTTHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSS-GGGTTCCSEEEE
T ss_pred CCCEEEECCCCCCHHHHHHHhh--CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhh-hhhcCCCCEEEE
Confidence 4578999999999999999988 6799999999999999999999999999999999998753221 113568999988
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHHHHHHHHHHHHcCCceeE
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGKLV 370 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~~~~~~~~l~~~g~~~~~ 370 (420)
+ |..... .++++.+. .++|++.+++.++...+... ...+.+.||....
T Consensus 363 d---PPr~g~--------~~~~~~l~-~~~p~~ivyvsc~p~tlard-~~~l~~~Gy~~~~ 410 (433)
T 1uwv_A 363 D---PARAGA--------AGVMQQII-KLEPIRIVYVSCNPATLARD-SEALLKAGYTIAR 410 (433)
T ss_dssp C---CCTTCC--------HHHHHHHH-HHCCSEEEEEESCHHHHHHH-HHHHHHTTCEEEE
T ss_pred C---CCCccH--------HHHHHHHH-hcCCCeEEEEECChHHHHhh-HHHHHHCCcEEEE
Confidence 5 321111 14555554 37999999997765555444 4566777887654
No 230
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.15 E-value=2.2e-10 Score=112.71 Aligned_cols=104 Identities=14% Similarity=0.287 Sum_probs=81.5
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCC-cEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGIT-NGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~-nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
++.+|||||||+|.++..+++. +..+|+|+|+| .+++.|++++..+++. +++++++|+.++. + +++++|.|+
T Consensus 38 ~~~~VLDiGcGtG~ls~~la~~-g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~---~--~~~~~D~Iv 110 (328)
T 1g6q_1 38 KDKIVLDVGCGTGILSMFAAKH-GAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVH---L--PFPKVDIII 110 (328)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-CCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSC---C--SSSCEEEEE
T ss_pred CCCEEEEecCccHHHHHHHHHC-CCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhcc---C--CCCcccEEE
Confidence 3678999999999999998886 55699999999 6999999999988885 5999999998761 2 357899998
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEE
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVF 345 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~ 345 (420)
+..+..... +. -.-..++..+.++|||||.++
T Consensus 111 s~~~~~~l~---~~--~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 111 SEWMGYFLL---YE--SMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp ECCCBTTBS---TT--CCHHHHHHHHHHHEEEEEEEE
T ss_pred EeCchhhcc---cH--HHHHHHHHHHHhhcCCCeEEE
Confidence 863322110 00 011478899999999999997
No 231
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.15 E-value=7.1e-11 Score=115.85 Aligned_cols=102 Identities=17% Similarity=0.180 Sum_probs=83.2
Q ss_pred CEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCC-CcEEEEEcChhhhhhhhhccCCCeEeEEEEe
Q 014711 232 PLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGI-TNGYFIATNATSTFRSIVASYPGKLILVSIQ 310 (420)
Q Consensus 232 ~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l-~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~~ 310 (420)
.+|||||||+|.++..+++++|+.+++++|+ +.+++.|++++...++ .+++++++|+.+. + +..+|.|++.
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~---~~~~D~v~~~ 240 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQE----V---PSNGDIYLLS 240 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTTC----C---CSSCSEEEEE
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCCC----C---CCCCCEEEEc
Confidence 7999999999999999999999999999999 9999999999887765 4799999998752 2 3579999886
Q ss_pred CCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 311 CPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 311 fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
..-..+ ... ....+++.+++.|+|||++++.
T Consensus 241 ~vl~~~--~~~----~~~~~l~~~~~~L~pgG~l~i~ 271 (334)
T 2ip2_A 241 RIIGDL--DEA----ASLRLLGNCREAMAGDGRVVVI 271 (334)
T ss_dssp SCGGGC--CHH----HHHHHHHHHHHHSCTTCEEEEE
T ss_pred hhccCC--CHH----HHHHHHHHHHHhcCCCCEEEEE
Confidence 322110 000 1137999999999999999986
No 232
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.14 E-value=2e-10 Score=104.19 Aligned_cols=128 Identities=13% Similarity=0.088 Sum_probs=83.7
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhh-----hhhhc-cCCCe
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTF-----RSIVA-SYPGK 303 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~-----~~~~~-~~~~~ 303 (420)
++.+|||+|||+|.++..++++ ...|+|+|+++. ....|++++++|+.+.. ...+. ...++
T Consensus 25 ~g~~VLDlG~G~G~~s~~la~~--~~~V~gvD~~~~-----------~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 91 (191)
T 3dou_A 25 KGDAVIEIGSSPGGWTQVLNSL--ARKIISIDLQEM-----------EEIAGVRFIRCDIFKETIFDDIDRALREEGIEK 91 (191)
T ss_dssp TTCEEEEESCTTCHHHHHHTTT--CSEEEEEESSCC-----------CCCTTCEEEECCTTSSSHHHHHHHHHHHHTCSS
T ss_pred CCCEEEEEeecCCHHHHHHHHc--CCcEEEEecccc-----------ccCCCeEEEEccccCHHHHHHHHHHhhcccCCc
Confidence 4689999999999999999988 789999999985 23568999999997641 11120 00148
Q ss_pred EeEEEEeCCCCCCCCc---chhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHHHHHHHHHHHHcCCceeEe
Q 014711 304 LILVSIQCPNPDFNRP---EHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGKLVL 371 (420)
Q Consensus 304 ~d~i~~~fpdp~~k~~---~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~~~~~~~~l~~~g~~~~~~ 371 (420)
||.|+++.+..+.-.. +....-+....++.+.++|||||.|++.+-...-...+...++.+ |..+.+
T Consensus 92 ~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~~~~~~~~l~~~-F~~v~~ 161 (191)
T 3dou_A 92 VDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDMTNDFIAIWRKN-FSSYKI 161 (191)
T ss_dssp EEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTHHHHHHHHHGGG-EEEEEE
T ss_pred ceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCCHHHHHHHHHHh-cCEEEE
Confidence 9999886432221111 111111225788999999999999998763222234456666543 443433
No 233
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.14 E-value=2.5e-10 Score=102.70 Aligned_cols=120 Identities=13% Similarity=0.125 Sum_probs=82.2
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCC---------CeEEEEeCChHHHHHHHHHhHHhCCCcEEEE-EcChhhhhh-----
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKD---------LNFLGLEVNGKLVTHCRDSLQLSGITNGYFI-ATNATSTFR----- 294 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~---------~~viGiDis~~~i~~A~~~~~~~~l~nv~~~-~~Da~~~~~----- 294 (420)
++.+|||+|||+|.++..+++..+. .+++|+|+|+.+ .+.+++++ ++|+.....
T Consensus 22 ~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~~~~~~~~~~d~~~~~~~~~~~ 90 (196)
T 2nyu_A 22 PGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PLEGATFLCPADVTDPRTSQRIL 90 (196)
T ss_dssp TTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CCTTCEEECSCCTTSHHHHHHHH
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cCCCCeEEEeccCCCHHHHHHHH
Confidence 3679999999999999999999765 899999999842 34678999 999876421
Q ss_pred hhhccCCCeEeEEEEeCCCCCCCCcchhh-----hhhHHHHHHHHHhhccCCeEEEEEeCcHHHHHHHHHHHHHc
Q 014711 295 SIVASYPGKLILVSIQCPNPDFNRPEHRW-----RMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEY 364 (420)
Q Consensus 295 ~~~~~~~~~~d~i~~~fpdp~~k~~~~k~-----Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~~~~~~~~l~~~ 364 (420)
..+ ++.+||.|++.++..+. .++.. ......+++++.++|||||.|++.+-.......+.+.+...
T Consensus 91 ~~~--~~~~fD~V~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~ 161 (196)
T 2nyu_A 91 EVL--PGRRADVILSDMAPNAT--GFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGSQSRRLQRRLTEE 161 (196)
T ss_dssp HHS--GGGCEEEEEECCCCCCC--SCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSGGGHHHHHHHHHH
T ss_pred Hhc--CCCCCcEEEeCCCCCCC--CCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCccHHHHHHHHHHH
Confidence 112 24689999986532221 11110 11124789999999999999999853322234455555543
No 234
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.13 E-value=2.4e-10 Score=109.27 Aligned_cols=128 Identities=9% Similarity=0.098 Sum_probs=86.0
Q ss_pred CCEEEEEcCCc--cHHHHHHHHh-CCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhh--------hhhcc
Q 014711 231 QPLVVDIGSGN--GLFLLGMARK-RKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFR--------SIVAS 299 (420)
Q Consensus 231 ~~~vLDIGcG~--G~~~~~lA~~-~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~--------~~~~~ 299 (420)
...+||||||. +..+..++++ .|+.+|+++|.|+.|++.|++++...+..+++|+++|+.+... ..++
T Consensus 79 ~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D- 157 (277)
T 3giw_A 79 IRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLD- 157 (277)
T ss_dssp CCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCC-
T ss_pred CCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccC-
Confidence 36899999997 4455666654 8999999999999999999998865444579999999988621 1111
Q ss_pred CCCeEeEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEe---Cc-HHHHHHHHHHHHHcC
Q 014711 300 YPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS---DI-EEVMLRMKQQFLEYG 365 (420)
Q Consensus 300 ~~~~~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~t---d~-~~~~~~~~~~l~~~g 365 (420)
.+..+ .|+++..-.|...... -..+++++.+.|+|||+|.+.+ |. +...+.+.+.+...+
T Consensus 158 ~~~p~-av~~~avLH~l~d~~~-----p~~~l~~l~~~L~PGG~Lvls~~~~d~~p~~~~~~~~~~~~~g 221 (277)
T 3giw_A 158 LTRPV-ALTVIAIVHFVLDEDD-----AVGIVRRLLEPLPSGSYLAMSIGTAEFAPQEVGRVAREYAARN 221 (277)
T ss_dssp TTSCC-EEEEESCGGGSCGGGC-----HHHHHHHHHTTSCTTCEEEEEEECCTTSHHHHHHHHHHHHHTT
T ss_pred cCCcc-hHHhhhhHhcCCchhh-----HHHHHHHHHHhCCCCcEEEEEeccCCCCHHHHHHHHHHHHhcC
Confidence 12233 3555533333221110 0278999999999999999874 32 334455666565544
No 235
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.12 E-value=4.2e-10 Score=112.84 Aligned_cols=102 Identities=10% Similarity=0.075 Sum_probs=87.0
Q ss_pred CCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHh---------------CCCcEEEEEcChhhhhhh
Q 014711 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLS---------------GITNGYFIATNATSTFRS 295 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~---------------~l~nv~~~~~Da~~~~~~ 295 (420)
+.+|||+|||+|.+++.+|++.+...|+++|+++.+++.+++|++.+ +++|++++++|+..++..
T Consensus 48 ~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~~ 127 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMAE 127 (378)
T ss_dssp CSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHHH
T ss_pred CCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHHh
Confidence 67899999999999999999988889999999999999999999998 888899999999987532
Q ss_pred hhccCCCeEeEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEe
Q 014711 296 IVASYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 348 (420)
Q Consensus 296 ~~~~~~~~~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~t 348 (420)
....||.|++ ||... ..++++.+.+.|||||.+++.+
T Consensus 128 ----~~~~fD~I~l---DP~~~---------~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 128 ----RHRYFHFIDL---DPFGS---------PMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp ----STTCEEEEEE---CCSSC---------CHHHHHHHHHHEEEEEEEEEEE
T ss_pred ----ccCCCCEEEe---CCCCC---------HHHHHHHHHHhcCCCCEEEEEe
Confidence 1457999985 45311 1379999999999999998864
No 236
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.12 E-value=5.8e-10 Score=113.56 Aligned_cols=107 Identities=16% Similarity=0.228 Sum_probs=84.4
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
.+.+|||+|||+|.+++.+|+. ..+|+|+|+|+.+++.|++++..++++ ++|+++|+.+++ ..+||.|++
T Consensus 290 ~~~~VLDlgcG~G~~sl~la~~--~~~V~gvD~s~~ai~~A~~n~~~ngl~-v~~~~~d~~~~~-------~~~fD~Vv~ 359 (425)
T 2jjq_A 290 EGEKILDMYSGVGTFGIYLAKR--GFNVKGFDSNEFAIEMARRNVEINNVD-AEFEVASDREVS-------VKGFDTVIV 359 (425)
T ss_dssp CSSEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCC-EEEEECCTTTCC-------CTTCSEEEE
T ss_pred CCCEEEEeeccchHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChHHcC-------ccCCCEEEE
Confidence 4679999999999999999987 568999999999999999999988988 999999998762 227999988
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHHHHHH
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRM 357 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~~~~~ 357 (420)
+ |-... ..+.+++.+. .|+|+|.+++.++...+...+
T Consensus 360 d---PPr~g-------~~~~~~~~l~-~l~p~givyvsc~p~tlarDl 396 (425)
T 2jjq_A 360 D---PPRAG-------LHPRLVKRLN-REKPGVIVYVSCNPETFARDV 396 (425)
T ss_dssp C---CCTTC-------SCHHHHHHHH-HHCCSEEEEEESCHHHHHHHH
T ss_pred c---CCccc-------hHHHHHHHHH-hcCCCcEEEEECChHHHHhHH
Confidence 5 32111 1124666664 599999999988655554443
No 237
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.11 E-value=4.8e-10 Score=112.01 Aligned_cols=121 Identities=15% Similarity=0.136 Sum_probs=84.8
Q ss_pred CCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccC----------
Q 014711 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASY---------- 300 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~---------- 300 (420)
+..|||+|||+|.+++.+|+. ..+|+|+|+|+.+++.|++|+..++++|++|+++|+.++++.+....
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~--~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~ 291 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARN--FDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDL 291 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGG--SSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSCG
T ss_pred CCEEEEccCCCCHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhcccccccccccc
Confidence 467999999999999999986 46899999999999999999999999999999999998754321100
Q ss_pred -CCeEeEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHHHHHHHHHHHHcCCce
Q 014711 301 -PGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGK 368 (420)
Q Consensus 301 -~~~~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~~~~~~~~l~~~g~~~ 368 (420)
+.+||.|++. |-.. .+...+.+.|+++|.++..+-++.....-...|.+ +|..
T Consensus 292 ~~~~fD~Vv~d---PPr~-----------g~~~~~~~~l~~~g~ivyvsc~p~t~ard~~~l~~-~y~~ 345 (369)
T 3bt7_A 292 KSYQCETIFVD---PPRS-----------GLDSETEKMVQAYPRILYISCNPETLCKNLETLSQ-THKV 345 (369)
T ss_dssp GGCCEEEEEEC---CCTT-----------CCCHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHH-HEEE
T ss_pred ccCCCCEEEEC---cCcc-----------ccHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhh-CcEE
Confidence 0379999874 3211 12234455666788777666554433333333433 3443
No 238
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.10 E-value=1.2e-10 Score=111.78 Aligned_cols=108 Identities=15% Similarity=0.224 Sum_probs=78.1
Q ss_pred CCEEEEEcCCccH----HHHHHHHhCC----CCeEEEEeCChHHHHHHHHHhHH-----------------------hC-
Q 014711 231 QPLVVDIGSGNGL----FLLGMARKRK----DLNFLGLEVNGKLVTHCRDSLQL-----------------------SG- 278 (420)
Q Consensus 231 ~~~vLDIGcG~G~----~~~~lA~~~P----~~~viGiDis~~~i~~A~~~~~~-----------------------~~- 278 (420)
..+|+|+|||+|. +++.|++..| +.+++|+|+|+.|++.|++++-. .+
T Consensus 106 ~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~ 185 (274)
T 1af7_A 106 EYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGL 185 (274)
T ss_dssp CEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSE
T ss_pred CcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCc
Confidence 4689999999999 5666777655 46999999999999999987510 01
Q ss_pred --C-----CcEEEEEcChhhhhhhhhccCCCeEeEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEe
Q 014711 279 --I-----TNGYFIATNATSTFRSIVASYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 348 (420)
Q Consensus 279 --l-----~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~t 348 (420)
+ ++|.|.+.|+.+. + ++ ..+.||.|++...-.++.. -.+.++++.+++.|+|||+|++.+
T Consensus 186 ~~v~~~lr~~V~F~~~dl~~~-~--~~-~~~~fDlI~crnvliyf~~------~~~~~vl~~~~~~L~pgG~L~lg~ 252 (274)
T 1af7_A 186 VRVRQELANYVEFSSVNLLEK-Q--YN-VPGPFDAIFCRNVMIYFDK------TTQEDILRRFVPLLKPDGLLFAGH 252 (274)
T ss_dssp EEECHHHHTTEEEEECCTTCS-S--CC-CCCCEEEEEECSSGGGSCH------HHHHHHHHHHGGGEEEEEEEEECT
T ss_pred eeechhhcccCeEEecccCCC-C--CC-cCCCeeEEEECCchHhCCH------HHHHHHHHHHHHHhCCCcEEEEEe
Confidence 0 3699999999763 1 11 1468999988522122111 123589999999999999999843
No 239
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.09 E-value=3e-10 Score=112.34 Aligned_cols=129 Identities=11% Similarity=0.119 Sum_probs=95.6
Q ss_pred CCEEEEEcCCccHHHHHHHHhCCC-----CeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEe
Q 014711 231 QPLVVDIGSGNGLFLLGMARKRKD-----LNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLI 305 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~~P~-----~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d 305 (420)
+.+|||+|||+|.+++.+++..+. .+++|+|+++.+++.|+.++...++ ++.++++|+.... ....||
T Consensus 131 ~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~-~~~i~~~D~l~~~------~~~~fD 203 (344)
T 2f8l_A 131 NVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ-KMTLLHQDGLANL------LVDPVD 203 (344)
T ss_dssp EEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC-CCEEEESCTTSCC------CCCCEE
T ss_pred CCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC-CceEEECCCCCcc------ccCCcc
Confidence 578999999999999999988765 7899999999999999999988887 7899999986531 356899
Q ss_pred EEEEeCCCCCCCCcchhh----------hhhHHHHHHHHHhhccCCeEEEEEeCc----HHHHHHHHHHHHHcCC
Q 014711 306 LVSIQCPNPDFNRPEHRW----------RMVQRSLVEAVSDLLVHDGKVFLQSDI----EEVMLRMKQQFLEYGK 366 (420)
Q Consensus 306 ~i~~~fpdp~~k~~~~k~----------Rl~~~~~l~~i~~~LkpgG~l~~~td~----~~~~~~~~~~l~~~g~ 366 (420)
.|+.+-|-.+........ ...+..|+..+.+.|+|||++.+.+.+ ......+++.+.+.++
T Consensus 204 ~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~~~~~~~ir~~l~~~~~ 278 (344)
T 2f8l_A 204 VVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSDFAKVDKFIKKNGH 278 (344)
T ss_dssp EEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGGSTTHHHHHHHHHHHEE
T ss_pred EEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcCCchHHHHHHHHHhCCe
Confidence 999984311111100000 012236899999999999999998721 1224567777777665
No 240
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=99.09 E-value=3.5e-10 Score=107.59 Aligned_cols=131 Identities=15% Similarity=0.098 Sum_probs=93.9
Q ss_pred CCCEEEEEcCCccHHHHHHHHh-------CCC-----CeEEEEeCCh---HHHH-----------HHHHHhHH-------
Q 014711 230 AQPLVVDIGSGNGLFLLGMARK-------RKD-----LNFLGLEVNG---KLVT-----------HCRDSLQL------- 276 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~-------~P~-----~~viGiDis~---~~i~-----------~A~~~~~~------- 276 (420)
+..+|||||||+|..++.+++. .|+ .+|+++|..+ +.+. .|++.+..
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 3578999999999999887664 674 5899999887 4444 44555443
Q ss_pred -------hCCCcEEEEEcChhhhhhhhhccCCCeEeEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeC
Q 014711 277 -------SGITNGYFIATNATSTFRSIVASYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSD 349 (420)
Q Consensus 277 -------~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td 349 (420)
.+..|++++.+|+.+.++..-......||.|++ |+|.+++++ ++.++++++.+++.|+|||+|...|-
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~ifl---D~fsp~~~p--~lw~~~~l~~l~~~L~pGG~l~tysa 214 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFL---DGFAPAKNP--DMWTQNLFNAMARLARPGGTLATFTS 214 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEE---CSSCTTTCG--GGCCHHHHHHHHHHEEEEEEEEESCC
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEE---CCCCcccCh--hhcCHHHHHHHHHHcCCCcEEEEEeC
Confidence 123579999999999765421000137999966 787666655 56678999999999999999986553
Q ss_pred cHHHHHHHHHHHHHcCCcee
Q 014711 350 IEEVMLRMKQQFLEYGKGKL 369 (420)
Q Consensus 350 ~~~~~~~~~~~l~~~g~~~~ 369 (420)
.. .+++.+.+.||...
T Consensus 215 a~----~vrr~L~~aGF~v~ 230 (257)
T 2qy6_A 215 AG----FVRRGLQEAGFTMQ 230 (257)
T ss_dssp BH----HHHHHHHHHTEEEE
T ss_pred CH----HHHHHHHHCCCEEE
Confidence 32 46777888888754
No 241
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.08 E-value=1.2e-10 Score=120.50 Aligned_cols=104 Identities=13% Similarity=0.155 Sum_probs=80.7
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCC-CcEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGI-TNGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l-~nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
.+.+|||||||+|.+++.+|+ .+..+|+|+|+|+ +++.|++++..+++ .+++++++|+.++ + .+++||.|+
T Consensus 158 ~~~~VLDiGcGtG~la~~la~-~~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~-~-----~~~~fD~Iv 229 (480)
T 3b3j_A 158 KDKIVLDVGCGSGILSFFAAQ-AGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEV-S-----LPEQVDIII 229 (480)
T ss_dssp TTCEEEEESCSTTHHHHHHHH-TTCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTC-C-----CSSCEEEEE
T ss_pred CCCEEEEecCcccHHHHHHHH-cCCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhC-c-----cCCCeEEEE
Confidence 367999999999999999887 5778999999998 99999999999888 5799999999875 1 246899998
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
++.+.- |.... -..+.+..+.+.|||||.+++.
T Consensus 230 s~~~~~-----~~~~e-~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 230 SEPMGY-----MLFNE-RMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp CCCCHH-----HHTCH-HHHHHHHHGGGGEEEEEEEESC
T ss_pred EeCchH-----hcCcH-HHHHHHHHHHHhcCCCCEEEEE
Confidence 753210 00000 0125667889999999999853
No 242
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.07 E-value=2.5e-10 Score=115.27 Aligned_cols=120 Identities=16% Similarity=0.109 Sum_probs=91.5
Q ss_pred CCCEEEEEcCCccHHHHHHHHhC-CCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKR-KDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~-P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
.+.+|||+|||+|.+++.+++++ +..+++|+|+++.+++.| .++.++++|+.+.. .++.||.|+
T Consensus 39 ~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a---------~~~~~~~~D~~~~~------~~~~fD~Ii 103 (421)
T 2ih2_A 39 RGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP---------PWAEGILADFLLWE------PGEAFDLIL 103 (421)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---------TTEEEEESCGGGCC------CSSCEEEEE
T ss_pred CCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---------CCCcEEeCChhhcC------ccCCCCEEE
Confidence 35699999999999999999886 678999999999998766 47999999998752 356899999
Q ss_pred EeCCCCCCCCcc---------hh-hhh-------------hHHHHHHHHHhhccCCeEEEEEeCcH----HHHHHHHHHH
Q 014711 309 IQCPNPDFNRPE---------HR-WRM-------------VQRSLVEAVSDLLVHDGKVFLQSDIE----EVMLRMKQQF 361 (420)
Q Consensus 309 ~~fpdp~~k~~~---------~k-~Rl-------------~~~~~l~~i~~~LkpgG~l~~~td~~----~~~~~~~~~l 361 (420)
.+ .|+..... .. +.. ....|++.+.+.|+|||++.+.+... .+.+.+++.+
T Consensus 104 ~N--PPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l~~~~~~~lr~~l 181 (421)
T 2ih2_A 104 GN--PPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLEDFALLREFL 181 (421)
T ss_dssp EC--CCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGGTCGGGHHHHHHH
T ss_pred EC--cCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHHhcCccHHHHHHHH
Confidence 98 56643322 11 111 12378999999999999999987442 2356678877
Q ss_pred HHcCC
Q 014711 362 LEYGK 366 (420)
Q Consensus 362 ~~~g~ 366 (420)
.+.++
T Consensus 182 ~~~~~ 186 (421)
T 2ih2_A 182 AREGK 186 (421)
T ss_dssp HHHSE
T ss_pred HhcCC
Confidence 77665
No 243
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.06 E-value=6.4e-10 Score=110.45 Aligned_cols=103 Identities=12% Similarity=0.076 Sum_probs=80.3
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
...+|||||||+|.++..+++++|+.+++..|. +.+++.|++++...+.+||+|+.+|..+. +....|.+++
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~-------~~~~~D~~~~ 250 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKD-------PLPEADLYIL 250 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTS-------CCCCCSEEEE
T ss_pred cCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccC-------CCCCceEEEe
Confidence 357899999999999999999999999999997 88999999988776778999999998653 2334688877
Q ss_pred eCCC-CCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 310 QCPN-PDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 310 ~fpd-p~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
...- -|+ .. ....+|+++++.|+|||++++.
T Consensus 251 ~~vlh~~~---d~----~~~~iL~~~~~al~pgg~lli~ 282 (353)
T 4a6d_A 251 ARVLHDWA---DG----KCSHLLERIYHTCKPGGGILVI 282 (353)
T ss_dssp ESSGGGSC---HH----HHHHHHHHHHHHCCTTCEEEEE
T ss_pred eeecccCC---HH----HHHHHHHHHHhhCCCCCEEEEE
Confidence 5211 111 11 1137899999999999999885
No 244
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.05 E-value=2.3e-10 Score=115.68 Aligned_cols=123 Identities=19% Similarity=0.280 Sum_probs=86.8
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEE--EEEcChhhhhhhhhccCCCeEeEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGY--FIATNATSTFRSIVASYPGKLILV 307 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~--~~~~Da~~~~~~~~~~~~~~~d~i 307 (420)
.+.+|||||||+|.++..+++. ..+++|+|+|+.+++.|+++ ++.+.. |...++..+ +..+++||.|
T Consensus 107 ~~~~VLDiGcG~G~~~~~l~~~--g~~v~gvD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~l-----~~~~~~fD~I 175 (416)
T 4e2x_A 107 PDPFIVEIGCNDGIMLRTIQEA--GVRHLGFEPSSGVAAKAREK----GIRVRTDFFEKATADDV-----RRTEGPANVI 175 (416)
T ss_dssp SSCEEEEETCTTTTTHHHHHHT--TCEEEEECCCHHHHHHHHTT----TCCEECSCCSHHHHHHH-----HHHHCCEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHc--CCcEEEECCCHHHHHHHHHc----CCCcceeeechhhHhhc-----ccCCCCEEEE
Confidence 4679999999999999999987 56999999999999998775 433321 223333332 1136899999
Q ss_pred EEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHH-------------------HHHHHHHHHHcCCce
Q 014711 308 SIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEV-------------------MLRMKQQFLEYGKGK 368 (420)
Q Consensus 308 ~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~-------------------~~~~~~~l~~~g~~~ 368 (420)
+++..-.+..+ ...++++++++|||||++++.+.+... .+++.+.+++.||..
T Consensus 176 ~~~~vl~h~~d--------~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~ 247 (416)
T 4e2x_A 176 YAANTLCHIPY--------VQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFSATSVQGMAQRCGFEL 247 (416)
T ss_dssp EEESCGGGCTT--------HHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCCEECCHHHHHHHHHHTTEEE
T ss_pred EECChHHhcCC--------HHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhhhhhhhcCCHHHHHHHHHHcCCEE
Confidence 98743222211 138999999999999999997532110 235777788888776
Q ss_pred eEe
Q 014711 369 LVL 371 (420)
Q Consensus 369 ~~~ 371 (420)
..+
T Consensus 248 ~~~ 250 (416)
T 4e2x_A 248 VDV 250 (416)
T ss_dssp EEE
T ss_pred EEE
Confidence 544
No 245
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.04 E-value=4.7e-10 Score=108.21 Aligned_cols=77 Identities=14% Similarity=0.190 Sum_probs=64.9
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCC-CcEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGI-TNGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l-~nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
++..|||||||+|.++..|++. ..+++|+|+|+.+++.+++++...+. .|++++++|+.+. .-.++|.|+
T Consensus 28 ~~~~VLDiG~G~G~lt~~L~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~-------~~~~fD~vv 98 (285)
T 1zq9_A 28 PTDVVLEVGPGTGNMTVKLLEK--AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKT-------DLPFFDTCV 98 (285)
T ss_dssp TTCEEEEECCTTSTTHHHHHHH--SSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTS-------CCCCCSEEE
T ss_pred CCCEEEEEcCcccHHHHHHHhh--CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecc-------cchhhcEEE
Confidence 4678999999999999999998 45899999999999999999876665 6899999999875 123789999
Q ss_pred EeCCCCC
Q 014711 309 IQCPNPD 315 (420)
Q Consensus 309 ~~fpdp~ 315 (420)
.+.|-.|
T Consensus 99 ~nlpy~~ 105 (285)
T 1zq9_A 99 ANLPYQI 105 (285)
T ss_dssp EECCGGG
T ss_pred EecCccc
Confidence 9865443
No 246
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.02 E-value=1.5e-09 Score=109.20 Aligned_cols=115 Identities=17% Similarity=0.230 Sum_probs=86.5
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCC--------------------------------------CCeEEEEeCChHHHHHHH
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRK--------------------------------------DLNFLGLEVNGKLVTHCR 271 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P--------------------------------------~~~viGiDis~~~i~~A~ 271 (420)
.+..+||.+||+|.+++++|.... ..+++|+|+++.+++.|+
T Consensus 195 ~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar 274 (385)
T 3ldu_A 195 AGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIAR 274 (385)
T ss_dssp TTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHHH
Confidence 357899999999999999987632 267999999999999999
Q ss_pred HHhHHhCCC-cEEEEEcChhhhhhhhhccCCCeEeEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccC--CeEEEEEe
Q 014711 272 DSLQLSGIT-NGYFIATNATSTFRSIVASYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVH--DGKVFLQS 348 (420)
Q Consensus 272 ~~~~~~~l~-nv~~~~~Da~~~~~~~~~~~~~~~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~Lkp--gG~l~~~t 348 (420)
+|+..+++. +++|.++|+.++. .+.++|.|+++ .|+.........+ ..+.+.+.+.||+ |+.+++-|
T Consensus 275 ~Na~~~gl~~~i~~~~~D~~~l~------~~~~~D~Iv~N--PPyg~rl~~~~~l--~~ly~~lg~~lk~~~g~~~~iit 344 (385)
T 3ldu_A 275 ENAEIAGVDEYIEFNVGDATQFK------SEDEFGFIITN--PPYGERLEDKDSV--KQLYKELGYAFRKLKNWSYYLIT 344 (385)
T ss_dssp HHHHHHTCGGGEEEEECCGGGCC------CSCBSCEEEEC--CCCCCSHHHHHHH--HHHHHHHHHHHHTSBSCEEEEEE
T ss_pred HHHHHcCCCCceEEEECChhhcC------cCCCCcEEEEC--CCCcCccCCHHHH--HHHHHHHHHHHhhCCCCEEEEEE
Confidence 999999986 7999999998862 24689999887 5553221111111 2455666666766 88888888
Q ss_pred CcHHHH
Q 014711 349 DIEEVM 354 (420)
Q Consensus 349 d~~~~~ 354 (420)
.+..+.
T Consensus 345 ~~~~l~ 350 (385)
T 3ldu_A 345 SYEDFE 350 (385)
T ss_dssp SCTTHH
T ss_pred CCHHHH
Confidence 766643
No 247
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.00 E-value=2.6e-09 Score=107.33 Aligned_cols=114 Identities=14% Similarity=0.144 Sum_probs=85.9
Q ss_pred CCEEEEEcCCccHHHHHHHHhCCC--------------------------------------CeEEEEeCChHHHHHHHH
Q 014711 231 QPLVVDIGSGNGLFLLGMARKRKD--------------------------------------LNFLGLEVNGKLVTHCRD 272 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~~P~--------------------------------------~~viGiDis~~~i~~A~~ 272 (420)
+..+||.+||+|.++++.|....+ .+++|+|+++.+++.|++
T Consensus 195 ~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar~ 274 (384)
T 3ldg_A 195 DKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIARK 274 (384)
T ss_dssp TSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHH
T ss_pred CCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHHHH
Confidence 567999999999999998876433 569999999999999999
Q ss_pred HhHHhCCCc-EEEEEcChhhhhhhhhccCCCeEeEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccC--CeEEEEEeC
Q 014711 273 SLQLSGITN-GYFIATNATSTFRSIVASYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVH--DGKVFLQSD 349 (420)
Q Consensus 273 ~~~~~~l~n-v~~~~~Da~~~~~~~~~~~~~~~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~Lkp--gG~l~~~td 349 (420)
|+...|+.+ ++|.++|+.++. .+.++|.|+++ .|+-..-..+..+ ..+.+.+.+.||+ ||.+++-|.
T Consensus 275 Na~~~gl~~~I~~~~~D~~~l~------~~~~fD~Iv~N--PPYG~rl~~~~~l--~~ly~~lg~~lk~~~g~~~~iit~ 344 (384)
T 3ldg_A 275 NAREVGLEDVVKLKQMRLQDFK------TNKINGVLISN--PPYGERLLDDKAV--DILYNEMGETFAPLKTWSQFILTN 344 (384)
T ss_dssp HHHHTTCTTTEEEEECCGGGCC------CCCCSCEEEEC--CCCTTTTSCHHHH--HHHHHHHHHHHTTCTTSEEEEEES
T ss_pred HHHHcCCCCceEEEECChHHCC------ccCCcCEEEEC--CchhhccCCHHHH--HHHHHHHHHHHhhCCCcEEEEEEC
Confidence 999999875 999999998862 24589999887 5553221111111 2455556666665 999998887
Q ss_pred cHHHH
Q 014711 350 IEEVM 354 (420)
Q Consensus 350 ~~~~~ 354 (420)
+..+.
T Consensus 345 ~~~l~ 349 (384)
T 3ldg_A 345 DTDFE 349 (384)
T ss_dssp CTTHH
T ss_pred CHHHH
Confidence 66643
No 248
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.00 E-value=5.3e-10 Score=102.21 Aligned_cols=107 Identities=9% Similarity=0.065 Sum_probs=81.2
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
++..|||||||+|.++..++ .+++|+|+|+. ++.++++|+.++ +.++++||.|++
T Consensus 67 ~~~~vLDiG~G~G~~~~~l~-----~~v~~~D~s~~---------------~~~~~~~d~~~~-----~~~~~~fD~v~~ 121 (215)
T 2zfu_A 67 ASLVVADFGCGDCRLASSIR-----NPVHCFDLASL---------------DPRVTVCDMAQV-----PLEDESVDVAVF 121 (215)
T ss_dssp TTSCEEEETCTTCHHHHHCC-----SCEEEEESSCS---------------STTEEESCTTSC-----SCCTTCEEEEEE
T ss_pred CCCeEEEECCcCCHHHHHhh-----ccEEEEeCCCC---------------CceEEEeccccC-----CCCCCCEeEEEE
Confidence 35789999999999998874 68999999987 567889998774 224678999998
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHH--HHHHHHHHHHHcCCceeE
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEE--VMLRMKQQFLEYGKGKLV 370 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~--~~~~~~~~l~~~g~~~~~ 370 (420)
.+.-.+ .+ ...+++++.++|+|||.+++..-... ..+++.+.+++.||....
T Consensus 122 ~~~l~~---~~------~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~~~~l~~~Gf~~~~ 175 (215)
T 2zfu_A 122 CLSLMG---TN------IRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAVTKLGFKIVS 175 (215)
T ss_dssp ESCCCS---SC------HHHHHHHHHHHEEEEEEEEEEECGGGCSCHHHHHHHHHHTTEEEEE
T ss_pred ehhccc---cC------HHHHHHHHHHhCCCCeEEEEEEcCCCCCCHHHHHHHHHHCCCEEEE
Confidence 743321 11 14899999999999999998643221 245678889999987654
No 249
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.00 E-value=1.9e-09 Score=108.67 Aligned_cols=114 Identities=16% Similarity=0.170 Sum_probs=84.8
Q ss_pred CCEEEEEcCCccHHHHHHHHhCCC--------------------------------------CeEEEEeCChHHHHHHHH
Q 014711 231 QPLVVDIGSGNGLFLLGMARKRKD--------------------------------------LNFLGLEVNGKLVTHCRD 272 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~~P~--------------------------------------~~viGiDis~~~i~~A~~ 272 (420)
+..+||.+||+|.+++++|....+ ..++|+|+++.+++.|++
T Consensus 202 ~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~Ar~ 281 (393)
T 3k0b_A 202 DRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIAKQ 281 (393)
T ss_dssp TSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHH
T ss_pred CCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHHHH
Confidence 567999999999999998876433 569999999999999999
Q ss_pred HhHHhCCCc-EEEEEcChhhhhhhhhccCCCeEeEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccC--CeEEEEEeC
Q 014711 273 SLQLSGITN-GYFIATNATSTFRSIVASYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVH--DGKVFLQSD 349 (420)
Q Consensus 273 ~~~~~~l~n-v~~~~~Da~~~~~~~~~~~~~~~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~Lkp--gG~l~~~td 349 (420)
|+...|+.+ ++|.++|+.++. .+.++|.|+++ .|+......+..+ ..+.+.+.+.||+ ||.+++-|.
T Consensus 282 Na~~~gl~~~I~~~~~D~~~~~------~~~~fD~Iv~N--PPYg~rl~~~~~l--~~ly~~lg~~lk~~~g~~~~iit~ 351 (393)
T 3k0b_A 282 NAVEAGLGDLITFRQLQVADFQ------TEDEYGVVVAN--PPYGERLEDEEAV--RQLYREMGIVYKRMPTWSVYVLTS 351 (393)
T ss_dssp HHHHTTCTTCSEEEECCGGGCC------CCCCSCEEEEC--CCCCCSHHHHHHH--HHHHHHHHHHHHTCTTCEEEEEEC
T ss_pred HHHHcCCCCceEEEECChHhCC------CCCCCCEEEEC--CCCccccCCchhH--HHHHHHHHHHHhcCCCCEEEEEEC
Confidence 999999874 999999998862 24589999887 4542221111111 2345555556655 999988887
Q ss_pred cHHHH
Q 014711 350 IEEVM 354 (420)
Q Consensus 350 ~~~~~ 354 (420)
+..+.
T Consensus 352 ~~~l~ 356 (393)
T 3k0b_A 352 YELFE 356 (393)
T ss_dssp CTTHH
T ss_pred CHHHH
Confidence 66653
No 250
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.99 E-value=5.3e-10 Score=112.05 Aligned_cols=100 Identities=18% Similarity=0.065 Sum_probs=73.7
Q ss_pred CCCEEEEEcCC------ccHHHHHHHHh-CCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhh-hhhhccCC
Q 014711 230 AQPLVVDIGSG------NGLFLLGMARK-RKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTF-RSIVASYP 301 (420)
Q Consensus 230 ~~~~vLDIGcG------~G~~~~~lA~~-~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~-~~~~~~~~ 301 (420)
.+.+||||||| +|..++.++++ +|+.+++|+|+|+.|. ...+|++|+++|+.++. ...+...+
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~---------~~~~rI~fv~GDa~dlpf~~~l~~~d 286 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH---------VDELRIRTIQGDQNDAEFLDRIARRY 286 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG---------GCBTTEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh---------hcCCCcEEEEecccccchhhhhhccc
Confidence 35789999999 77788888876 6999999999999972 13468999999998751 10111014
Q ss_pred CeEeEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 302 GKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 302 ~~~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
++||.|+.... .+ .. ....+|++++++|||||+|++.
T Consensus 287 ~sFDlVisdgs-H~-----~~---d~~~aL~el~rvLKPGGvlVi~ 323 (419)
T 3sso_A 287 GPFDIVIDDGS-HI-----NA---HVRTSFAALFPHVRPGGLYVIE 323 (419)
T ss_dssp CCEEEEEECSC-CC-----HH---HHHHHHHHHGGGEEEEEEEEEE
T ss_pred CCccEEEECCc-cc-----ch---hHHHHHHHHHHhcCCCeEEEEE
Confidence 78999987521 11 11 1247899999999999999985
No 251
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.99 E-value=4.2e-09 Score=102.74 Aligned_cols=117 Identities=9% Similarity=0.024 Sum_probs=85.7
Q ss_pred CCCEEEEEcCCccHHHHHHHHhC-CCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKR-KDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~-P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
.+.+|||+|||+|..+..+|+.. +...|+++|+++.+++.+++++.+.|+.|+.++++|+.++... .+ ...+||.|+
T Consensus 102 ~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~-~~-~~~~fD~Vl 179 (309)
T 2b9e_A 102 PGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPS-DP-RYHEVHYIL 179 (309)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTT-CG-GGTTEEEEE
T ss_pred CCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCcc-cc-ccCCCCEEE
Confidence 46799999999999999999874 5689999999999999999999999999999999999876211 00 014699998
Q ss_pred EeCC-----------CC-CCCCcchh--h--hhhHHHHHHHHHhhccCCeEEEEEeC
Q 014711 309 IQCP-----------NP-DFNRPEHR--W--RMVQRSLVEAVSDLLVHDGKVFLQSD 349 (420)
Q Consensus 309 ~~fp-----------dp-~~k~~~~k--~--Rl~~~~~l~~i~~~LkpgG~l~~~td 349 (420)
+.-| |. |.+...+. . .-++.++|+.+.+.|+ ||+++..|-
T Consensus 180 ~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTC 235 (309)
T 2b9e_A 180 LDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTC 235 (309)
T ss_dssp ECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEES
T ss_pred EcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECC
Confidence 7522 21 10000000 0 1234678888888887 999988763
No 252
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.99 E-value=1.6e-09 Score=108.47 Aligned_cols=103 Identities=15% Similarity=0.263 Sum_probs=78.4
Q ss_pred CCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCc-EEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITN-GYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~n-v~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
+.+|||||||+|.+++..|+. -..+|+|+|.|+ +++.|++++..+++.+ ++++++|+.++. .++.+|.|+.
T Consensus 84 ~k~VLDvG~GtGiLs~~Aa~a-GA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~------lpe~~Dvivs 155 (376)
T 4hc4_A 84 GKTVLDVGAGTGILSIFCAQA-GARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVE------LPEQVDAIVS 155 (376)
T ss_dssp TCEEEEETCTTSHHHHHHHHT-TCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCC------CSSCEEEEEC
T ss_pred CCEEEEeCCCccHHHHHHHHh-CCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeec------CCccccEEEe
Confidence 679999999999988776765 346899999996 8899999999999875 999999998862 3578999976
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEE
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFL 346 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~ 346 (420)
...+-... +. . +-+.++....++|||||.++-
T Consensus 156 E~~~~~l~---~e-~-~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 156 EWMGYGLL---HE-S-MLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp CCCBTTBT---TT-C-SHHHHHHHHHHHEEEEEEEES
T ss_pred eccccccc---cc-c-hhhhHHHHHHhhCCCCceECC
Confidence 43222100 00 0 125788888999999998764
No 253
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.99 E-value=2e-09 Score=108.30 Aligned_cols=122 Identities=14% Similarity=0.116 Sum_probs=94.0
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCC-CeEEEEeCChHHHHHHHHHhHHhCCCc--EEEEEcChhhhhh-hhhccCCCeEe
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKD-LNFLGLEVNGKLVTHCRDSLQLSGITN--GYFIATNATSTFR-SIVASYPGKLI 305 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~-~~viGiDis~~~i~~A~~~~~~~~l~n--v~~~~~Da~~~~~-~~~~~~~~~~d 305 (420)
++.+|||++||+|.+++.+|++.++ ..|+++|+++.+++.+++|++.+++.| ++++++|+.+++. . ....||
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~----~~~~fD 127 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKE----WGFGFD 127 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSC----CSSCEE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHh----hCCCCc
Confidence 3678999999999999999997654 689999999999999999999999987 9999999998753 3 245799
Q ss_pred EEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHHH--HHHHHHHHHcCCc
Q 014711 306 LVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVM--LRMKQQFLEYGKG 367 (420)
Q Consensus 306 ~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~~--~~~~~~l~~~g~~ 367 (420)
.|++ ||. .. ...+++.+.+.|+|||.+++.+....-. .+....++.+|..
T Consensus 128 ~V~l---DP~-g~--------~~~~l~~a~~~Lk~gGll~~t~t~~~~l~g~~~~~~~rkYg~~ 179 (392)
T 3axs_A 128 YVDL---DPF-GT--------PVPFIESVALSMKRGGILSLTATDTAPLSGTYPKTCMRRYMAR 179 (392)
T ss_dssp EEEE---CCS-SC--------CHHHHHHHHHHEEEEEEEEEEECCHHHHTTSSHHHHHHHHSSB
T ss_pred EEEE---CCC-cC--------HHHHHHHHHHHhCCCCEEEEEecchhhhccccHHHHHHHhCCc
Confidence 9977 552 11 1268999999999999999876332211 0234455555543
No 254
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.99 E-value=5.4e-10 Score=111.55 Aligned_cols=97 Identities=16% Similarity=0.229 Sum_probs=74.7
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
...+|||||||+|.++..+++++|+.+++++|+ +.+++.|++ ..+++|+++|+.+- + ++. |.|++
T Consensus 203 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~~----~--p~~--D~v~~ 267 (368)
T 3reo_A 203 GLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPA------FSGVEHLGGDMFDG----V--PKG--DAIFI 267 (368)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------CTTEEEEECCTTTC----C--CCC--SEEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhh------cCCCEEEecCCCCC----C--CCC--CEEEE
Confidence 468999999999999999999999999999999 888876643 25899999999752 2 233 88887
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
.+.-.+ .... ....+|++++++|||||+|++.
T Consensus 268 ~~vlh~--~~~~----~~~~~l~~~~~~L~pgG~l~i~ 299 (368)
T 3reo_A 268 KWICHD--WSDE----HCLKLLKNCYAALPDHGKVIVA 299 (368)
T ss_dssp ESCGGG--BCHH----HHHHHHHHHHHHSCTTCEEEEE
T ss_pred echhhc--CCHH----HHHHHHHHHHHHcCCCCEEEEE
Confidence 632211 0000 1137899999999999999885
No 255
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.97 E-value=5e-10 Score=110.73 Aligned_cols=102 Identities=19% Similarity=0.281 Sum_probs=75.2
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCC-CcEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGI-TNGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l-~nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
+..+|||||||+|.++..+++++|+.+++++|++ .++. ++++...+. .+++|+++|+.+. + + ++|.|+
T Consensus 184 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~--~~~~~~~~~~~~v~~~~~d~~~~----~---p-~~D~v~ 252 (348)
T 3lst_A 184 ATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRA-EVVA--RHRLDAPDVAGRWKVVEGDFLRE----V---P-HADVHV 252 (348)
T ss_dssp SSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECH-HHHT--TCCCCCGGGTTSEEEEECCTTTC----C---C-CCSEEE
T ss_pred CCceEEEECCccCHHHHHHHHHCCCCEEEEecCH-HHhh--cccccccCCCCCeEEEecCCCCC----C---C-CCcEEE
Confidence 4679999999999999999999999999999994 4444 333333343 4699999999632 1 3 899998
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEe
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 348 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~t 348 (420)
+...-.++ ... ....+|++++++|||||+|++..
T Consensus 253 ~~~vlh~~--~d~----~~~~~L~~~~~~LkpgG~l~i~e 286 (348)
T 3lst_A 253 LKRILHNW--GDE----DSVRILTNCRRVMPAHGRVLVID 286 (348)
T ss_dssp EESCGGGS--CHH----HHHHHHHHHHHTCCTTCEEEEEE
T ss_pred EehhccCC--CHH----HHHHHHHHHHHhcCCCCEEEEEE
Confidence 86322111 100 11379999999999999998853
No 256
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.97 E-value=2.5e-10 Score=109.79 Aligned_cols=106 Identities=15% Similarity=0.076 Sum_probs=72.7
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhH-HhCCC-cEEEE--EcChhhhhhhhhccCCCeEe
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQ-LSGIT-NGYFI--ATNATSTFRSIVASYPGKLI 305 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~-~~~l~-nv~~~--~~Da~~~~~~~~~~~~~~~d 305 (420)
++.+|||+|||+|.++..++++ .+|+|+|+|+ ++..++++.. ..... |+.|+ ++|+.++ ++++||
T Consensus 82 ~g~~VLDlGcGtG~~s~~la~~---~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l-------~~~~fD 150 (276)
T 2wa2_A 82 LKGTVVDLGCGRGSWSYYAASQ---PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKM-------EPFQAD 150 (276)
T ss_dssp CCEEEEEESCTTCHHHHHHHTS---TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGC-------CCCCCS
T ss_pred CCCEEEEeccCCCHHHHHHHHc---CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhC-------CCCCcC
Confidence 4678999999999999999987 6899999999 5433322110 00111 78999 9999875 367899
Q ss_pred EEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCe--EEEEEe
Q 014711 306 LVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDG--KVFLQS 348 (420)
Q Consensus 306 ~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG--~l~~~t 348 (420)
.|++.+. .+.... .....-...+|+.+.++||||| .|++.+
T Consensus 151 ~Vvsd~~-~~~~~~-~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~ 193 (276)
T 2wa2_A 151 TVLCDIG-ESNPTA-AVEASRTLTVLNVISRWLEYNQGCGFCVKV 193 (276)
T ss_dssp EEEECCC-CCCSCH-HHHHHHHHHHHHHHHHHHHHSTTCEEEEEE
T ss_pred EEEECCC-cCCCch-hhhHHHHHHHHHHHHHHhccCCCcEEEEEe
Confidence 9998765 221111 0000001137899999999999 998865
No 257
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.96 E-value=4.1e-10 Score=107.59 Aligned_cols=105 Identities=11% Similarity=0.092 Sum_probs=72.3
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHH-hCC-CcEEEE--EcChhhhhhhhhccCCCeEe
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQL-SGI-TNGYFI--ATNATSTFRSIVASYPGKLI 305 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~-~~l-~nv~~~--~~Da~~~~~~~~~~~~~~~d 305 (420)
++.+|||+|||+|.++..+++. .+|+|+|+++ ++..++++... ... .|+.|+ ++|+.++ ++.+||
T Consensus 74 ~g~~VLDlGcGtG~~s~~la~~---~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l-------~~~~fD 142 (265)
T 2oxt_A 74 LTGRVVDLGCGRGGWSYYAASR---PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTL-------PVERTD 142 (265)
T ss_dssp CCEEEEEESCTTSHHHHHHHTS---TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTS-------CCCCCS
T ss_pred CCCEEEEeCcCCCHHHHHHHHc---CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHC-------CCCCCc
Confidence 3678999999999999999987 6899999999 53322211000 001 178999 9999875 367899
Q ss_pred EEEEeCCCCCCCCcchhhhhh-HHHHHHHHHhhccCCe--EEEEEe
Q 014711 306 LVSIQCPNPDFNRPEHRWRMV-QRSLVEAVSDLLVHDG--KVFLQS 348 (420)
Q Consensus 306 ~i~~~fpdp~~k~~~~k~Rl~-~~~~l~~i~~~LkpgG--~l~~~t 348 (420)
.|++.+. ... .++..... ...+|+.+.++||||| .|++.+
T Consensus 143 ~V~sd~~-~~~--~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv 185 (265)
T 2oxt_A 143 VIMCDVG-ESS--PKWSVESERTIKILELLEKWKVKNPSADFVVKV 185 (265)
T ss_dssp EEEECCC-CCC--SCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred EEEEeCc-ccC--CccchhHHHHHHHHHHHHHHhccCCCeEEEEEe
Confidence 9998765 221 11110000 1137899999999999 999876
No 258
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.96 E-value=1e-09 Score=106.14 Aligned_cols=120 Identities=9% Similarity=0.064 Sum_probs=82.1
Q ss_pred CCCEEEEEcCCc------cHHHHHHHHhCC-CCeEEEEeCChHHHHHHHHHhHHhCCCcEEE-EEcChhhhhhhhhccCC
Q 014711 230 AQPLVVDIGSGN------GLFLLGMARKRK-DLNFLGLEVNGKLVTHCRDSLQLSGITNGYF-IATNATSTFRSIVASYP 301 (420)
Q Consensus 230 ~~~~vLDIGcG~------G~~~~~lA~~~P-~~~viGiDis~~~i~~A~~~~~~~~l~nv~~-~~~Da~~~~~~~~~~~~ 301 (420)
++.+|||+|||+ |. ..+++..| +..|+|+|+|+. ++|++| +++|+.++. .+
T Consensus 63 ~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-------------v~~v~~~i~gD~~~~~------~~ 121 (290)
T 2xyq_A 63 YNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-------------VSDADSTLIGDCATVH------TA 121 (290)
T ss_dssp TTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-------------BCSSSEEEESCGGGCC------CS
T ss_pred CCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-------------CCCCEEEEECccccCC------cc
Confidence 467999999955 66 55676766 689999999998 247889 999998751 24
Q ss_pred CeEeEEEEeCCCCCCCC--c-chhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHHHHHHHHHHHHcCCceeE
Q 014711 302 GKLILVSIQCPNPDFNR--P-EHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGKLV 370 (420)
Q Consensus 302 ~~~d~i~~~fpdp~~k~--~-~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~~~~~~~~l~~~g~~~~~ 370 (420)
++||.|+++.+.++... . +.....+.+++++.+.++|||||.|++..-......++.+.++++||..+.
T Consensus 122 ~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~~~~l~~~l~~~GF~~v~ 193 (290)
T 2xyq_A 122 NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWNADLYKLMGHFSWWTAF 193 (290)
T ss_dssp SCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCHHHHHHHTTEEEEEEE
T ss_pred CcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCCHHHHHHHHHHcCCcEEE
Confidence 68999998755443211 1 111111235789999999999999999652222234577778887765443
No 259
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.95 E-value=1.1e-09 Score=109.20 Aligned_cols=97 Identities=13% Similarity=0.216 Sum_probs=76.1
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
...+|||||||+|.++..+++++|+.+++++|+ +.+++.|++ .++++++++|+.+- + +. +|.|++
T Consensus 209 ~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~~----~---~~-~D~v~~ 273 (372)
T 1fp1_D 209 GISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPP------LSGIEHVGGDMFAS----V---PQ-GDAMIL 273 (372)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------CTTEEEEECCTTTC----C---CC-EEEEEE
T ss_pred CCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhh------cCCCEEEeCCcccC----C---CC-CCEEEE
Confidence 467999999999999999999999999999999 999877653 35799999999752 2 22 899988
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
...-.+. ... ....+|++++++|||||+|++.
T Consensus 274 ~~~lh~~--~d~----~~~~~l~~~~~~L~pgG~l~i~ 305 (372)
T 1fp1_D 274 KAVCHNW--SDE----KCIEFLSNCHKALSPNGKVIIV 305 (372)
T ss_dssp ESSGGGS--CHH----HHHHHHHHHHHHEEEEEEEEEE
T ss_pred ecccccC--CHH----HHHHHHHHHHHhcCCCCEEEEE
Confidence 7432111 111 1137999999999999999886
No 260
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.95 E-value=1.1e-09 Score=102.59 Aligned_cols=120 Identities=14% Similarity=0.060 Sum_probs=75.9
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEE-EcChhhhhhhhhcc---CCCeEe
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFI-ATNATSTFRSIVAS---YPGKLI 305 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~-~~Da~~~~~~~~~~---~~~~~d 305 (420)
.+.+|||||||+|.++..|++. ...+|+|+|+|+.|++.|+++..+ +... ..++.......++. ...++|
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~-g~~~V~gvDis~~ml~~a~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~d~~~~D 110 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQN-GAKLVYALDVGTNQLAWKIRSDER-----VVVMEQFNFRNAVLADFEQGRPSFTSID 110 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSCCCCCHHHHTCTT-----EEEECSCCGGGCCGGGCCSCCCSEEEEC
T ss_pred CCCEEEEEccCCCHHHHHHHhc-CCCEEEEEcCCHHHHHHHHHhCcc-----ccccccceEEEeCHhHcCcCCCCEEEEE
Confidence 4679999999999999999988 335999999999999988775432 2211 12222221111110 112333
Q ss_pred EEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeC------c-----------H----HHHHHHHHHHHHc
Q 014711 306 LVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSD------I-----------E----EVMLRMKQQFLEY 364 (420)
Q Consensus 306 ~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td------~-----------~----~~~~~~~~~l~~~ 364 (420)
.++++. ..+++++.++|||||+|++.+. + + ...+++.+.+++.
T Consensus 111 ~v~~~l----------------~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~a 174 (232)
T 3opn_A 111 VSFISL----------------DLILPPLYEILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQL 174 (232)
T ss_dssp CSSSCG----------------GGTHHHHHHHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred EEhhhH----------------HHHHHHHHHhccCCCEEEEEECcccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHC
Confidence 332221 2689999999999999998631 0 0 1123466677788
Q ss_pred CCceeEe
Q 014711 365 GKGKLVL 371 (420)
Q Consensus 365 g~~~~~~ 371 (420)
||....+
T Consensus 175 Gf~v~~~ 181 (232)
T 3opn_A 175 GFSVKGL 181 (232)
T ss_dssp TEEEEEE
T ss_pred CCEEEEE
Confidence 8876544
No 261
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.94 E-value=4.8e-09 Score=99.12 Aligned_cols=124 Identities=10% Similarity=-0.001 Sum_probs=93.7
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
....|||||||.|-+++.++...|..+|+++|+++.+++.+++++..+|+. .++.+.|...-. +++.+|.+.+
T Consensus 132 ~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~-~~~~v~D~~~~~------p~~~~DvaL~ 204 (281)
T 3lcv_B 132 RPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVP-HRTNVADLLEDR------LDEPADVTLL 204 (281)
T ss_dssp CCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCC-EEEEECCTTTSC------CCSCCSEEEE
T ss_pred CCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEeeecccC------CCCCcchHHH
Confidence 357899999999999999999999999999999999999999999988876 788888887542 4788999988
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCc-----------HHHHHHHHHHHHHcCCce
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI-----------EEVMLRMKQQFLEYGKGK 368 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~-----------~~~~~~~~~~l~~~g~~~ 368 (420)
+-.-| +-.+--+...+ .+.+.|+|+|.|+-. +. +.|.+++.+.+.+.||..
T Consensus 205 lkti~------~Le~q~kg~g~-~ll~aL~~~~vvVSf-p~ksl~Grs~gm~~~Y~~~~e~~~~~~g~~~ 266 (281)
T 3lcv_B 205 LKTLP------CLETQQRGSGW-EVIDIVNSPNIVVTF-PTKSLGQRSKGMFQNYSQSFESQARERSCRI 266 (281)
T ss_dssp TTCHH------HHHHHSTTHHH-HHHHHSSCSEEEEEE-ECC-------CHHHHHHHHHHHHHHHHTCCE
T ss_pred HHHHH------HhhhhhhHHHH-HHHHHhCCCCEEEec-cchhhcCCCcchhhHHHHHHHHHHHhcCCce
Confidence 62222 11111112344 789999999988642 22 455556666666777744
No 262
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.94 E-value=1.2e-09 Score=109.00 Aligned_cols=97 Identities=16% Similarity=0.235 Sum_probs=74.7
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
...+|||||||+|.++..+++++|+.+++++|+ +.+++.|++ ..+++|+.+|+.+- + +.+ |.|++
T Consensus 201 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~D~~~~----~--p~~--D~v~~ 265 (364)
T 3p9c_A 201 GLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQ------FPGVTHVGGDMFKE----V--PSG--DTILM 265 (364)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------CTTEEEEECCTTTC----C--CCC--SEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhh------cCCeEEEeCCcCCC----C--CCC--CEEEe
Confidence 468999999999999999999999999999999 888876643 36899999999752 2 233 98887
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
...-.. .... ....+|++++++|||||+|++.
T Consensus 266 ~~vlh~--~~d~----~~~~~L~~~~~~L~pgG~l~i~ 297 (364)
T 3p9c_A 266 KWILHD--WSDQ----HCATLLKNCYDALPAHGKVVLV 297 (364)
T ss_dssp ESCGGG--SCHH----HHHHHHHHHHHHSCTTCEEEEE
T ss_pred hHHhcc--CCHH----HHHHHHHHHHHHcCCCCEEEEE
Confidence 632110 0000 1137899999999999999885
No 263
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.92 E-value=1.4e-09 Score=106.00 Aligned_cols=104 Identities=12% Similarity=0.058 Sum_probs=71.9
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeC----ChHHHHHHHHHhHHhCCCcEEEEEc-ChhhhhhhhhccCCCeE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEV----NGKLVTHCRDSLQLSGITNGYFIAT-NATSTFRSIVASYPGKL 304 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDi----s~~~i~~A~~~~~~~~l~nv~~~~~-Da~~~~~~~~~~~~~~~ 304 (420)
++.+|||+|||+|.++..+|++ ..|+|+|+ ++.++..+ .....+.+++.|+++ |+..+ ++.+|
T Consensus 82 ~g~~VLDlGcG~G~~s~~la~~---~~V~gvD~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~D~~~l-------~~~~f 149 (305)
T 2p41_A 82 PEGKVVDLGCGRGGWSYYCGGL---KNVREVKGLTKGGPGHEEPI--PMSTYGWNLVRLQSGVDVFFI-------PPERC 149 (305)
T ss_dssp CCEEEEEETCTTSHHHHHHHTS---TTEEEEEEECCCSTTSCCCC--CCCSTTGGGEEEECSCCTTTS-------CCCCC
T ss_pred CCCEEEEEcCCCCHHHHHHHhc---CCEEEEeccccCchhHHHHH--HhhhcCCCCeEEEeccccccC-------CcCCC
Confidence 3679999999999999999987 58999999 55443211 111223467999999 88765 35689
Q ss_pred eEEEEeCCCCCCCCcchhh-hhhHHHHHHHHHhhccCCeEEEEEe
Q 014711 305 ILVSIQCPNPDFNRPEHRW-RMVQRSLVEAVSDLLVHDGKVFLQS 348 (420)
Q Consensus 305 d~i~~~fpdp~~k~~~~k~-Rl~~~~~l~~i~~~LkpgG~l~~~t 348 (420)
|.|++.++.. ..++.. ......+|..+.++|||||.|++.+
T Consensus 150 D~V~sd~~~~---~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv 191 (305)
T 2p41_A 150 DTLLCDIGES---SPNPTVEAGRTLRVLNLVENWLSNNTQFCVKV 191 (305)
T ss_dssp SEEEECCCCC---CSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred CEEEECCccc---cCcchhhHHHHHHHHHHHHHHhCCCCEEEEEe
Confidence 9998865321 111110 0000147888999999999999875
No 264
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.92 E-value=1.6e-09 Score=107.16 Aligned_cols=97 Identities=13% Similarity=0.221 Sum_probs=75.6
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
...+|||||||+|.++..+++++|+.+++++|+ +.+++.|++ .++++|+++|+.+- + + .+|.|++
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~~----~---p-~~D~v~~ 252 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSG------SNNLTYVGGDMFTS----I---P-NADAVLL 252 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------BTTEEEEECCTTTC----C---C-CCSEEEE
T ss_pred cCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhccc------CCCcEEEeccccCC----C---C-CccEEEe
Confidence 357999999999999999999999999999999 999887754 35699999999652 2 2 3899988
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccC---CeEEEEE
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVH---DGKVFLQ 347 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~Lkp---gG~l~~~ 347 (420)
...-... ... ....+|++++++||| ||++++.
T Consensus 253 ~~~lh~~--~d~----~~~~~l~~~~~~L~p~~~gG~l~i~ 287 (352)
T 1fp2_A 253 KYILHNW--TDK----DCLRILKKCKEAVTNDGKRGKVTII 287 (352)
T ss_dssp ESCGGGS--CHH----HHHHHHHHHHHHHSGGGCCCEEEEE
T ss_pred ehhhccC--CHH----HHHHHHHHHHHhCCCCCCCcEEEEE
Confidence 6422111 111 113799999999999 9999885
No 265
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.90 E-value=3e-09 Score=103.23 Aligned_cols=75 Identities=15% Similarity=0.294 Sum_probs=61.6
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
.+..|||||||+|.++..|++. ..+++|+|+++.+++.|++++...+..|++++++|+..+ +..++|.|++
T Consensus 42 ~~~~VLDiG~G~G~lt~~La~~--~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~-------~~~~~D~Vv~ 112 (299)
T 2h1r_A 42 SSDIVLEIGCGTGNLTVKLLPL--AKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKT-------VFPKFDVCTA 112 (299)
T ss_dssp TTCEEEEECCTTSTTHHHHTTT--SSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSS-------CCCCCSEEEE
T ss_pred CcCEEEEEcCcCcHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhC-------CcccCCEEEE
Confidence 4678999999999999999987 569999999999999999999878888999999999875 2347999999
Q ss_pred eCCC
Q 014711 310 QCPN 313 (420)
Q Consensus 310 ~fpd 313 (420)
+.|-
T Consensus 113 n~py 116 (299)
T 2h1r_A 113 NIPY 116 (299)
T ss_dssp ECCG
T ss_pred cCCc
Confidence 8543
No 266
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.89 E-value=2.1e-09 Score=103.76 Aligned_cols=99 Identities=16% Similarity=0.122 Sum_probs=70.5
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEE-EEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGY-FIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~-~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
.+.++||||||+|.++..|++. +..+|+|+|+|+.|++.+.++ ..++. +...|+..+..+.+ +..+||.++
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~-ga~~V~aVDvs~~mL~~a~r~-----~~rv~~~~~~ni~~l~~~~l--~~~~fD~v~ 156 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQN-GAKLVYAVDVGTNQLVWKLRQ-----DDRVRSMEQYNFRYAEPVDF--TEGLPSFAS 156 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSSSCSCHHHHT-----CTTEEEECSCCGGGCCGGGC--TTCCCSEEE
T ss_pred cccEEEecCCCccHHHHHHHhC-CCCEEEEEECCHHHHHHHHHh-----CcccceecccCceecchhhC--CCCCCCEEE
Confidence 4679999999999999999887 557999999999999876442 12333 33456554422222 244599988
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
+...-.+ + ..+|.++.++|||||.|++.
T Consensus 157 ~d~sf~s---------l--~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 157 IDVSFIS---------L--NLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp ECCSSSC---------G--GGTHHHHHHHSCTTCEEEEE
T ss_pred EEeeHhh---------H--HHHHHHHHHHcCcCCEEEEE
Confidence 7532111 1 36899999999999999885
No 267
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.87 E-value=3.5e-09 Score=108.38 Aligned_cols=112 Identities=19% Similarity=0.163 Sum_probs=85.8
Q ss_pred CCEEEEEcCCccHHHHHHHHhC-------------CCCeEEEEeCChHHHHHHHHHhHHhCCC--cEEEEEcChhhhhhh
Q 014711 231 QPLVVDIGSGNGLFLLGMARKR-------------KDLNFLGLEVNGKLVTHCRDSLQLSGIT--NGYFIATNATSTFRS 295 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~~-------------P~~~viGiDis~~~i~~A~~~~~~~~l~--nv~~~~~Da~~~~~~ 295 (420)
+.+|+|.|||+|.+++.+++.. +..+++|+|+++.+++.|+.++..+++. ++.+.++|+....
T Consensus 172 ~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~~-- 249 (445)
T 2okc_A 172 GETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEKE-- 249 (445)
T ss_dssp TCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTSC--
T ss_pred CCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCCc--
Confidence 5689999999999999988763 4578999999999999999999888886 7889999987651
Q ss_pred hhccCCCeEeEEEEeCCCCCCCCcchhh-----h------hhHHHHHHHHHhhccCCeEEEEEeCc
Q 014711 296 IVASYPGKLILVSIQCPNPDFNRPEHRW-----R------MVQRSLVEAVSDLLVHDGKVFLQSDI 350 (420)
Q Consensus 296 ~~~~~~~~~d~i~~~fpdp~~k~~~~k~-----R------l~~~~~l~~i~~~LkpgG~l~~~td~ 350 (420)
....||.|+.+ .|+........ . -.+..|+..+.+.|||||++.+.+..
T Consensus 250 ----~~~~fD~Iv~N--PPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p~ 309 (445)
T 2okc_A 250 ----PSTLVDVILAN--PPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLPD 309 (445)
T ss_dssp ----CSSCEEEEEEC--CCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred ----ccCCcCEEEEC--CCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEECC
Confidence 23489999988 34322111100 0 01247999999999999999887643
No 268
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.87 E-value=6.1e-09 Score=109.84 Aligned_cols=75 Identities=19% Similarity=0.281 Sum_probs=66.3
Q ss_pred CCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEEe
Q 014711 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQ 310 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~~ 310 (420)
+-+|||||||.|.++..||+. +.+|+|||.|+.+|+.|+..+.+.+..|+.|.++++.++... + .+++||.|++.
T Consensus 67 ~~~vLDvGCG~G~~~~~la~~--ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~-~--~~~~fD~v~~~ 141 (569)
T 4azs_A 67 PLNVLDLGCAQGFFSLSLASK--GATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAA-L--EEGEFDLAIGL 141 (569)
T ss_dssp CCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHH-C--CTTSCSEEEEE
T ss_pred CCeEEEECCCCcHHHHHHHhC--CCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhh-c--cCCCccEEEEC
Confidence 468999999999999999998 789999999999999999999888877899999999987422 2 46789999876
No 269
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.86 E-value=8.6e-09 Score=100.17 Aligned_cols=80 Identities=9% Similarity=0.145 Sum_probs=67.3
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhcc-CCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVAS-YPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~-~~~~~d~i~ 308 (420)
++.++||+|||+|.++..+++++|+.+++|+|+|+.+++.|++++...+ .|++|+++|+.++ +..+.. ...+||.|+
T Consensus 26 ~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g-~~v~~v~~d~~~l-~~~l~~~g~~~~D~Vl 103 (301)
T 1m6y_A 26 DEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS-DRVSLFKVSYREA-DFLLKTLGIEKVDGIL 103 (301)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT-TTEEEEECCGGGH-HHHHHHTTCSCEEEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC-CcEEEEECCHHHH-HHHHHhcCCCCCCEEE
Confidence 4679999999999999999999998999999999999999999998877 7899999999876 322211 125799998
Q ss_pred EeC
Q 014711 309 IQC 311 (420)
Q Consensus 309 ~~f 311 (420)
+..
T Consensus 104 ~D~ 106 (301)
T 1m6y_A 104 MDL 106 (301)
T ss_dssp EEC
T ss_pred EcC
Confidence 753
No 270
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.83 E-value=3.8e-09 Score=93.55 Aligned_cols=107 Identities=13% Similarity=0.098 Sum_probs=79.5
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
++..|||||||. +++|+|+.|++.|+++... +++++++|+.++. ..+.++++||.|++
T Consensus 12 ~g~~vL~~~~g~----------------v~vD~s~~ml~~a~~~~~~----~~~~~~~d~~~~~--~~~~~~~~fD~V~~ 69 (176)
T 2ld4_A 12 AGQFVAVVWDKS----------------SPVEALKGLVDKLQALTGN----EGRVSVENIKQLL--QSAHKESSFDIILS 69 (176)
T ss_dssp TTSEEEEEECTT----------------SCHHHHHHHHHHHHHHTTT----TSEEEEEEGGGGG--GGCCCSSCEEEEEE
T ss_pred CCCEEEEecCCc----------------eeeeCCHHHHHHHHHhccc----CcEEEEechhcCc--cccCCCCCEeEEEE
Confidence 478999999996 2499999999999988632 5899999998762 10114789999998
Q ss_pred eCCCCCC-CCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHH---------HHHHHHHHHHHcCC
Q 014711 310 QCPNPDF-NRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEE---------VMLRMKQQFLEYGK 366 (420)
Q Consensus 310 ~fpdp~~-k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~---------~~~~~~~~l~~~g~ 366 (420)
++.-.|. .+ . .+++++++++|||||+|++...... ..+++.+.+++.||
T Consensus 70 ~~~l~~~~~~--~------~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 128 (176)
T 2ld4_A 70 GLVPGSTTLH--S------AEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL 128 (176)
T ss_dssp CCSTTCCCCC--C------HHHHHHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC
T ss_pred CChhhhcccC--H------HHHHHHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCC
Confidence 7544443 11 1 3899999999999999999642110 14567888999998
No 271
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.80 E-value=3e-08 Score=92.77 Aligned_cols=100 Identities=14% Similarity=-0.074 Sum_probs=76.7
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
....|||||||.|-+++.+. |...|+|+||++.+++.+++++...+ .+.++..+|..... +++++|.+.+
T Consensus 105 ~p~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~ar~~~~~~g-~~~~~~v~D~~~~~------~~~~~DvvLl 174 (253)
T 3frh_A 105 TPRRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVITPFAREKD-WDFTFALQDVLCAP------PAEAGDLALI 174 (253)
T ss_dssp CCSEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHHHHHHHHTT-CEEEEEECCTTTSC------CCCBCSEEEE
T ss_pred CCCeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHHHHHHHhcC-CCceEEEeecccCC------CCCCcchHHH
Confidence 46799999999999999877 89999999999999999999988777 67899999997652 4678999988
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEE
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFL 346 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~ 346 (420)
+- .-|+--+.-....+ .+.+.|++++.++-
T Consensus 175 lk------~lh~LE~q~~~~~~-~ll~aL~~~~vvVs 204 (253)
T 3frh_A 175 FK------LLPLLEREQAGSAM-ALLQSLNTPRMAVS 204 (253)
T ss_dssp ES------CHHHHHHHSTTHHH-HHHHHCBCSEEEEE
T ss_pred HH------HHHHhhhhchhhHH-HHHHHhcCCCEEEE
Confidence 72 21221111112333 77779999987764
No 272
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.79 E-value=6.7e-09 Score=102.96 Aligned_cols=96 Identities=18% Similarity=0.244 Sum_probs=74.8
Q ss_pred CCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEEe
Q 014711 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQ 310 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~~ 310 (420)
..+|||||||+|.++..+++++|+.+++++|+ +.+++.|++ .++++++++|+.+- + + .+|.|++.
T Consensus 194 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~~----~---~-~~D~v~~~ 258 (358)
T 1zg3_A 194 LESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG------NENLNFVGGDMFKS----I---P-SADAVLLK 258 (358)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC------CSSEEEEECCTTTC----C---C-CCSEEEEE
T ss_pred CCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc------CCCcEEEeCccCCC----C---C-CceEEEEc
Confidence 57899999999999999999999999999999 788876643 36799999998652 2 2 48999887
Q ss_pred CCCCCCCCcchhhhhhHHHHHHHHHhhccC---CeEEEEE
Q 014711 311 CPNPDFNRPEHRWRMVQRSLVEAVSDLLVH---DGKVFLQ 347 (420)
Q Consensus 311 fpdp~~k~~~~k~Rl~~~~~l~~i~~~Lkp---gG~l~~~ 347 (420)
..-.++ ... ....+|++++++|+| ||++++.
T Consensus 259 ~vlh~~--~d~----~~~~~l~~~~~~L~p~~~gG~l~i~ 292 (358)
T 1zg3_A 259 WVLHDW--NDE----QSLKILKNSKEAISHKGKDGKVIII 292 (358)
T ss_dssp SCGGGS--CHH----HHHHHHHHHHHHTGGGGGGCEEEEE
T ss_pred ccccCC--CHH----HHHHHHHHHHHhCCCCCCCcEEEEE
Confidence 432211 111 113799999999999 9999885
No 273
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.78 E-value=9.6e-09 Score=97.66 Aligned_cols=75 Identities=17% Similarity=0.126 Sum_probs=64.6
Q ss_pred CCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCCh-------HHHHHHHHHhHHhCCCc-EEEEEcChhhhhhhhhccCC-
Q 014711 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNG-------KLVTHCRDSLQLSGITN-GYFIATNATSTFRSIVASYP- 301 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~-------~~i~~A~~~~~~~~l~n-v~~~~~Da~~~~~~~~~~~~- 301 (420)
+.+|||+|||+|.+++.+|+. ..+|+|+|+|+ .+++.|++++..+++.| ++++++|+.++++.+ ++
T Consensus 84 ~~~VLDlgcG~G~~a~~lA~~--g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~---~~~ 158 (258)
T 2r6z_A 84 HPTVWDATAGLGRDSFVLASL--GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPAL---VKT 158 (258)
T ss_dssp CCCEEETTCTTCHHHHHHHHT--TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHH---HHH
T ss_pred cCeEEEeeCccCHHHHHHHHh--CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhh---hcc
Confidence 578999999999999999997 57999999999 99999999988888766 999999999875422 23
Q ss_pred -CeEeEEEEe
Q 014711 302 -GKLILVSIQ 310 (420)
Q Consensus 302 -~~~d~i~~~ 310 (420)
.+||.|+++
T Consensus 159 ~~~fD~V~~d 168 (258)
T 2r6z_A 159 QGKPDIVYLD 168 (258)
T ss_dssp HCCCSEEEEC
T ss_pred CCCccEEEEC
Confidence 689999886
No 274
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.76 E-value=1.5e-08 Score=102.37 Aligned_cols=109 Identities=15% Similarity=0.156 Sum_probs=78.2
Q ss_pred CCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHh--CCCcEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLS--GITNGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~--~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
+.+|||+|||+|..++.+|+. ..+|+|+|+|+.+++.|++|+... |+.|++++++|+.++++.. .+.+||.|+
T Consensus 94 g~~VLDLgcG~G~~al~LA~~--g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~---~~~~fDvV~ 168 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSK--ASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLI---KTFHPDYIY 168 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHH---HHHCCSEEE
T ss_pred CCEEEEeCCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhc---cCCCceEEE
Confidence 688999999999999999987 579999999999999999999988 8889999999999864321 135799998
Q ss_pred EeCCCCCCCCcchhhhhh-----HHHHHHHHHhhccCCeEEEEEe
Q 014711 309 IQCPNPDFNRPEHRWRMV-----QRSLVEAVSDLLVHDGKVFLQS 348 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~-----~~~~l~~i~~~LkpgG~l~~~t 348 (420)
++ |..... +.+|++ .|.+......++.....+.++.
T Consensus 169 lD---PPrr~~-~~grv~~led~~P~l~~~~~~l~~~~~~~~vK~ 209 (410)
T 3ll7_A 169 VD---PARRSG-ADKRVYAIADCEPDLIPLATELLPFCSSILAKL 209 (410)
T ss_dssp EC---CEEC------CCCCGGGEESCHHHHHHHHGGGSSEEEEEE
T ss_pred EC---CCCcCC-CCceEEehhhcCCCHHHHHHHHHhhCCcEEEEc
Confidence 74 422221 122322 2444443333444556666664
No 275
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.75 E-value=4.9e-08 Score=94.55 Aligned_cols=74 Identities=18% Similarity=0.173 Sum_probs=63.2
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
++..|||||||+|.++..|++. ..+|+|+|+++.+++.+++++. +..|++++++|+.++. + ++.++|.|+.
T Consensus 50 ~~~~VLEIG~G~G~lT~~La~~--~~~V~aVEid~~li~~a~~~~~--~~~~v~vi~gD~l~~~---~--~~~~fD~Iv~ 120 (295)
T 3gru_A 50 KDDVVLEIGLGKGILTEELAKN--AKKVYVIEIDKSLEPYANKLKE--LYNNIEIIWGDALKVD---L--NKLDFNKVVA 120 (295)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCGGGHHHHHHHHH--HCSSEEEEESCTTTSC---G--GGSCCSEEEE
T ss_pred CcCEEEEECCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHhc--cCCCeEEEECchhhCC---c--ccCCccEEEE
Confidence 4678999999999999999998 5799999999999999999886 4568999999998761 1 3457999998
Q ss_pred eCC
Q 014711 310 QCP 312 (420)
Q Consensus 310 ~fp 312 (420)
+.|
T Consensus 121 NlP 123 (295)
T 3gru_A 121 NLP 123 (295)
T ss_dssp ECC
T ss_pred eCc
Confidence 844
No 276
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.73 E-value=5.7e-08 Score=93.70 Aligned_cols=128 Identities=16% Similarity=0.242 Sum_probs=101.3
Q ss_pred CCCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHh-----CCCcEEEEEcChhhhhhhhhccCCCe
Q 014711 229 PAQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLS-----GITNGYFIATNATSTFRSIVASYPGK 303 (420)
Q Consensus 229 ~~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~-----~l~nv~~~~~Da~~~~~~~~~~~~~~ 303 (420)
++..+||=||-|.|..+.++++..|..+++.+||++..++.|++..... .-++++++.+|+..++.. ..++
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~----~~~~ 157 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQ----TSQT 157 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSC----SSCC
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhh----cccc
Confidence 4678999999999999999998877889999999999999999876432 235799999999988632 4678
Q ss_pred EeEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCc----HHHHHHHHHHHHHc
Q 014711 304 LILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI----EEVMLRMKQQFLEY 364 (420)
Q Consensus 304 ~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~----~~~~~~~~~~l~~~ 364 (420)
||.|++..+||+-. ...|.+.+|++.+.++|+|||.+..++.. ......+.+.+.+.
T Consensus 158 yDvIi~D~~dp~~~----~~~L~t~eFy~~~~~~L~p~Gv~v~q~~sp~~~~~~~~~~~~~l~~~ 218 (294)
T 3o4f_A 158 FDVIISDCTDPIGP----GESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHY 218 (294)
T ss_dssp EEEEEESCCCCCCT----TCCSSCCHHHHHHHHTEEEEEEEEEEEEESSSCCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcCCC----chhhcCHHHHHHHHHHhCCCCEEEEecCCcccChHHHHHHHHHHHhh
Confidence 99999998888632 23477789999999999999999997632 22233455555554
No 277
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.68 E-value=1.2e-07 Score=102.16 Aligned_cols=118 Identities=17% Similarity=0.169 Sum_probs=84.5
Q ss_pred CCCEEEEEcCCccHHHHHHHHh------------------------------------------CCCCeEEEEeCChHHH
Q 014711 230 AQPLVVDIGSGNGLFLLGMARK------------------------------------------RKDLNFLGLEVNGKLV 267 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~------------------------------------------~P~~~viGiDis~~~i 267 (420)
.+..+||.+||+|.++++.|.. .++..++|+|+++.++
T Consensus 190 ~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~av 269 (703)
T 3v97_A 190 PGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVI 269 (703)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHHH
T ss_pred CCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHHH
Confidence 3567999999999999998865 2346899999999999
Q ss_pred HHHHHHhHHhCCCc-EEEEEcChhhhhhhhhccCCCeEeEEEEeCCCCCCCCcchhh--hhhHHHHHHHHHhhccCCeEE
Q 014711 268 THCRDSLQLSGITN-GYFIATNATSTFRSIVASYPGKLILVSIQCPNPDFNRPEHRW--RMVQRSLVEAVSDLLVHDGKV 344 (420)
Q Consensus 268 ~~A~~~~~~~~l~n-v~~~~~Da~~~~~~~~~~~~~~~d~i~~~fpdp~~k~~~~k~--Rl~~~~~l~~i~~~LkpgG~l 344 (420)
+.|++|+...|+.+ ++|.++|+.++.. +...+++|.|++| .|+-..-..+. .-+. +-+.+..+.+.|||.+
T Consensus 270 ~~A~~N~~~agv~~~i~~~~~D~~~~~~---~~~~~~~d~Iv~N--PPYG~Rlg~~~~l~~ly-~~l~~~lk~~~~g~~~ 343 (703)
T 3v97_A 270 QRARTNARLAGIGELITFEVKDVAQLTN---PLPKGPYGTVLSN--PPYGERLDSEPALIALH-SLLGRIMKNQFGGWNL 343 (703)
T ss_dssp HHHHHHHHHTTCGGGEEEEECCGGGCCC---SCTTCCCCEEEEC--CCCCC---CCHHHHHHH-HHHHHHHHHHCTTCEE
T ss_pred HHHHHHHHHcCCCCceEEEECChhhCcc---ccccCCCCEEEeC--CCccccccchhHHHHHH-HHHHHHHHhhCCCCeE
Confidence 99999999999986 9999999988621 1112379999997 55522111010 1111 2234445556689999
Q ss_pred EEEeCcHHH
Q 014711 345 FLQSDIEEV 353 (420)
Q Consensus 345 ~~~td~~~~ 353 (420)
++-|.++.+
T Consensus 344 ~ilt~~~~l 352 (703)
T 3v97_A 344 SLFSASPDL 352 (703)
T ss_dssp EEEESCHHH
T ss_pred EEEeCCHHH
Confidence 999977665
No 278
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.67 E-value=5.1e-08 Score=92.47 Aligned_cols=74 Identities=19% Similarity=0.129 Sum_probs=60.4
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhh-hhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTF-RSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~-~~~~~~~~~~~d~i~ 308 (420)
++..|||||||+|.++..|+++. .+++|+|+++.+++.+++++.. ..|++++++|+.++. ++.+ .+.++| |+
T Consensus 29 ~~~~VLEIG~G~G~lt~~La~~~--~~V~avEid~~~~~~~~~~~~~--~~~v~~i~~D~~~~~~~~~~--~~~~~~-vv 101 (255)
T 3tqs_A 29 KTDTLVEIGPGRGALTDYLLTEC--DNLALVEIDRDLVAFLQKKYNQ--QKNITIYQNDALQFDFSSVK--TDKPLR-VV 101 (255)
T ss_dssp TTCEEEEECCTTTTTHHHHTTTS--SEEEEEECCHHHHHHHHHHHTT--CTTEEEEESCTTTCCGGGSC--CSSCEE-EE
T ss_pred CcCEEEEEcccccHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHhh--CCCcEEEEcchHhCCHHHhc--cCCCeE-EE
Confidence 46789999999999999999884 7999999999999999998764 568999999998872 2211 135677 66
Q ss_pred Ee
Q 014711 309 IQ 310 (420)
Q Consensus 309 ~~ 310 (420)
.|
T Consensus 102 ~N 103 (255)
T 3tqs_A 102 GN 103 (255)
T ss_dssp EE
T ss_pred ec
Confidence 77
No 279
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.66 E-value=5e-10 Score=105.37 Aligned_cols=108 Identities=14% Similarity=0.089 Sum_probs=75.4
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
++..|||||||+|.++..+++.. .+++|+|+|+.+++.|++++. ...|++++++|+.++. ++ .+++| .|+.
T Consensus 29 ~~~~VLDiG~G~G~~~~~l~~~~--~~v~~id~~~~~~~~a~~~~~--~~~~v~~~~~D~~~~~---~~-~~~~f-~vv~ 99 (245)
T 1yub_A 29 ETDTVYEIGTGKGHLTTKLAKIS--KQVTSIELDSHLFNLSSEKLK--LNTRVTLIHQDILQFQ---FP-NKQRY-KIVG 99 (245)
T ss_dssp SSEEEEECSCCCSSCSHHHHHHS--SEEEESSSSCSSSSSSSCTTT--TCSEEEECCSCCTTTT---CC-CSSEE-EEEE
T ss_pred CCCEEEEEeCCCCHHHHHHHHhC--CeEEEEECCHHHHHHHHHHhc--cCCceEEEECChhhcC---cc-cCCCc-EEEE
Confidence 46789999999999999999984 799999999999999988765 3468999999998761 11 13578 6666
Q ss_pred eCCCCCCCCcchhhhhh-----HHHHH----HHHHhhccCCeEEEEEe
Q 014711 310 QCPNPDFNRPEHRWRMV-----QRSLV----EAVSDLLVHDGKVFLQS 348 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~-----~~~~l----~~i~~~LkpgG~l~~~t 348 (420)
+ .|+......-..+. ...++ +.+.++|+|||.+.+.+
T Consensus 100 n--~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 100 N--IPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp E--CCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred e--CCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 6 34422211100110 01233 56788888988876643
No 280
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.63 E-value=5.7e-07 Score=89.29 Aligned_cols=128 Identities=12% Similarity=0.051 Sum_probs=96.2
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCC------CcEEEEEcChhhhhhhhhccCCCe
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGI------TNGYFIATNATSTFRSIVASYPGK 303 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l------~nv~~~~~Da~~~~~~~~~~~~~~ 303 (420)
.+.+|||+++|.|.=+.+||+..+...++++|+++..+...++++++.+. .|+.+.+.|+..+ ... ..+.
T Consensus 148 pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~-~~~---~~~~ 223 (359)
T 4fzv_A 148 PGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKW-GEL---EGDT 223 (359)
T ss_dssp TTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGH-HHH---STTC
T ss_pred CCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhc-chh---cccc
Confidence 47899999999999999999988778899999999999999999988765 4799999999886 222 3678
Q ss_pred EeEEEEeCC-----------CCCCCCcchhh---h--hhHHHHHHHHHhhccCCeEEEEEe------CcHHHHHHHHHHH
Q 014711 304 LILVSIQCP-----------NPDFNRPEHRW---R--MVQRSLVEAVSDLLVHDGKVFLQS------DIEEVMLRMKQQF 361 (420)
Q Consensus 304 ~d~i~~~fp-----------dp~~k~~~~k~---R--l~~~~~l~~i~~~LkpgG~l~~~t------d~~~~~~~~~~~l 361 (420)
||.|.+.-| +|..+.+.... + -+|.++|..+.+.|||||+++-.| .++...+++++..
T Consensus 224 fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~~ENE~vV~~~L~~~ 303 (359)
T 4fzv_A 224 YDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEYVVQGAIELL 303 (359)
T ss_dssp EEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCTTTTHHHHHHHHHHH
T ss_pred CCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCchhhCHHHHHHHHHhC
Confidence 999988633 11111111111 1 245789999999999999999887 3455555554443
No 281
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.59 E-value=1e-07 Score=99.88 Aligned_cols=128 Identities=16% Similarity=0.135 Sum_probs=92.2
Q ss_pred CCEEEEEcCCccHHHHHHHHhCC------------------CCeEEEEeCChHHHHHHHHHhHHhCCCc-----EEEEEc
Q 014711 231 QPLVVDIGSGNGLFLLGMARKRK------------------DLNFLGLEVNGKLVTHCRDSLQLSGITN-----GYFIAT 287 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~~P------------------~~~viGiDis~~~i~~A~~~~~~~~l~n-----v~~~~~ 287 (420)
+.+|+|.+||+|.+++.+++... ..+++|+|+++.+++.|+.++..+++.+ +.+.++
T Consensus 170 ~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~~g 249 (541)
T 2ar0_A 170 REVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRLG 249 (541)
T ss_dssp TCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEEES
T ss_pred CCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeEeC
Confidence 56899999999999999887531 2479999999999999999998888876 889999
Q ss_pred ChhhhhhhhhccCCCeEeEEEEeCCCCCCCCcchh--------hhhhHHHHHHHHHhhccCCeEEEEEeCcHHH-----H
Q 014711 288 NATSTFRSIVASYPGKLILVSIQCPNPDFNRPEHR--------WRMVQRSLVEAVSDLLVHDGKVFLQSDIEEV-----M 354 (420)
Q Consensus 288 Da~~~~~~~~~~~~~~~d~i~~~fpdp~~k~~~~k--------~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~-----~ 354 (420)
|+..... . ....||.|+.| .|+....... ..-....|+..+.+.|||||++.+.+.+..+ .
T Consensus 250 DtL~~~~--~--~~~~fD~Vv~N--PPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p~~~L~~~~~~ 323 (541)
T 2ar0_A 250 NTLGSDG--E--NLPKAHIVATN--PPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPDNVLFEGGKG 323 (541)
T ss_dssp CTTSHHH--H--TSCCEEEEEEC--CCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHHHHHCCTHH
T ss_pred CCccccc--c--cccCCeEEEEC--CCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEecCcceecCcHH
Confidence 9876421 1 35679999988 4442221100 0011237999999999999999988644322 3
Q ss_pred HHHHHHHHHc
Q 014711 355 LRMKQQFLEY 364 (420)
Q Consensus 355 ~~~~~~l~~~ 364 (420)
..+++.+.+.
T Consensus 324 ~~iR~~L~~~ 333 (541)
T 2ar0_A 324 TDIRRDLMDK 333 (541)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHhhc
Confidence 4466655544
No 282
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.59 E-value=4e-07 Score=83.16 Aligned_cols=102 Identities=13% Similarity=0.033 Sum_probs=77.3
Q ss_pred CCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCC---CcEEEEEcChhhh--------------h
Q 014711 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGI---TNGYFIATNATST--------------F 293 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l---~nv~~~~~Da~~~--------------~ 293 (420)
..+||||||| .+++.+|+. ++.+++.+|.+++..+.|++++.+.|+ .|++++.+|+.+. +
T Consensus 31 a~~VLEiGtG--ySTl~lA~~-~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l 107 (202)
T 3cvo_A 31 AEVILEYGSG--GSTVVAAEL-PGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSY 107 (202)
T ss_dssp CSEEEEESCS--HHHHHHHTS-TTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGT
T ss_pred CCEEEEECch--HHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhH
Confidence 5789999985 688888874 589999999999999999999999885 5799999997542 1
Q ss_pred hhhh----cc-CCCeEeEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCc
Q 014711 294 RSIV----AS-YPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI 350 (420)
Q Consensus 294 ~~~~----~~-~~~~~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~ 350 (420)
+.+. .. ..++||.|++. .- + | ...+..+.+.|+|||.+++ |+
T Consensus 108 ~~~~~~i~~~~~~~~fDlIfID---g~------k-~---~~~~~~~l~~l~~GG~Iv~--DN 154 (202)
T 3cvo_A 108 PDYPLAVWRTEGFRHPDVVLVD---GR------F-R---VGCALATAFSITRPVTLLF--DD 154 (202)
T ss_dssp THHHHGGGGCTTCCCCSEEEEC---SS------S-H---HHHHHHHHHHCSSCEEEEE--TT
T ss_pred HHHhhhhhccccCCCCCEEEEe---CC------C-c---hhHHHHHHHhcCCCeEEEE--eC
Confidence 2111 11 13689999885 21 1 1 1566667799999999966 54
No 283
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.59 E-value=4.1e-07 Score=85.44 Aligned_cols=59 Identities=20% Similarity=0.277 Sum_probs=52.8
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhh
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATST 292 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~ 292 (420)
++..|||||||+|.++..++++. .+++|+|+|+.+++.+++++.. ..|++++++|+.++
T Consensus 30 ~~~~VLDiG~G~G~lt~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~--~~~v~~~~~D~~~~ 88 (244)
T 1qam_A 30 EHDNIFEIGSGKGHFTLELVQRC--NFVTAIEIDHKLCKTTENKLVD--HDNFQVLNKDILQF 88 (244)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHS--SEEEEECSCHHHHHHHHHHTTT--CCSEEEECCCGGGC
T ss_pred CCCEEEEEeCCchHHHHHHHHcC--CeEEEEECCHHHHHHHHHhhcc--CCCeEEEEChHHhC
Confidence 46789999999999999999985 7899999999999999998753 36899999999876
No 284
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.58 E-value=3.9e-07 Score=95.32 Aligned_cols=133 Identities=17% Similarity=0.169 Sum_probs=97.0
Q ss_pred CCCEEEEEcCCccHHHHHHHHhC---CCCeEEEEeCChHHHHHHHHHhHHhCC--CcEEEEEcChhhhhhhhhccCCCeE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKR---KDLNFLGLEVNGKLVTHCRDSLQLSGI--TNGYFIATNATSTFRSIVASYPGKL 304 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~---P~~~viGiDis~~~i~~A~~~~~~~~l--~nv~~~~~Da~~~~~~~~~~~~~~~ 304 (420)
.+.+|+|.+||+|.+++.+++.. +..+++|+|+++.++..|+.++..+|+ .++.+.++|..... +.......|
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d--~p~~~~~~f 298 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDED--WPTQEPTNF 298 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSC--SCCSSCCCB
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceeccc--ccccccccc
Confidence 46789999999999999998874 467899999999999999999988888 57999999987541 100135689
Q ss_pred eEEEEeCCCCCCCCcc------hhhhh-----------hHHHHHHHHHhhcc-CCeEEEEEeCcHHH-----HHHHHHHH
Q 014711 305 ILVSIQCPNPDFNRPE------HRWRM-----------VQRSLVEAVSDLLV-HDGKVFLQSDIEEV-----MLRMKQQF 361 (420)
Q Consensus 305 d~i~~~fpdp~~k~~~------~k~Rl-----------~~~~~l~~i~~~Lk-pgG~l~~~td~~~~-----~~~~~~~l 361 (420)
|.|+.| .|+..... ...|. .+-.|+..+.+.|+ |||++.+.+.+..+ ...+++.+
T Consensus 299 D~IvaN--PPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g~Lf~~~~~~~iRk~L 376 (542)
T 3lkd_A 299 DGVLMN--PPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPHGVLFRGNAEGTIRKAL 376 (542)
T ss_dssp SEEEEC--CCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEETHHHHCCTHHHHHHHHH
T ss_pred cEEEec--CCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecchHhhCCchhHHHHHHH
Confidence 999998 45432210 00111 11358999999999 99999887654433 34567766
Q ss_pred HHcCC
Q 014711 362 LEYGK 366 (420)
Q Consensus 362 ~~~g~ 366 (420)
.+.+.
T Consensus 377 le~~~ 381 (542)
T 3lkd_A 377 LEEGA 381 (542)
T ss_dssp HHTTC
T ss_pred HhCCc
Confidence 66543
No 285
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.53 E-value=4.3e-07 Score=97.70 Aligned_cols=129 Identities=11% Similarity=0.102 Sum_probs=89.5
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCC---CCeEEEEeCChHHHHHH--HHHhHH----hCCCcEEEEEcChhhhhhhhhccC
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRK---DLNFLGLEVNGKLVTHC--RDSLQL----SGITNGYFIATNATSTFRSIVASY 300 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P---~~~viGiDis~~~i~~A--~~~~~~----~~l~nv~~~~~Da~~~~~~~~~~~ 300 (420)
.+.+|||.|||+|.+++.+++..+ ..+++|+|+++.+++.| +.++.. ++..+..+...|..... .. .
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~--~~--~ 396 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLN--PE--D 396 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCC--GG--G
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhccc--cc--c
Confidence 367999999999999999998875 35899999999999999 555543 34444566667765531 11 2
Q ss_pred CCeEeEEEEeCCCCCCCCcc--h-----hhhh----------------hHHHHHHHHHhhccCCeEEEEEeCcHHH----
Q 014711 301 PGKLILVSIQCPNPDFNRPE--H-----RWRM----------------VQRSLVEAVSDLLVHDGKVFLQSDIEEV---- 353 (420)
Q Consensus 301 ~~~~d~i~~~fpdp~~k~~~--~-----k~Rl----------------~~~~~l~~i~~~LkpgG~l~~~td~~~~---- 353 (420)
...||.|..| .|+..... . ..|+ +...|+..+.+.|+|||++.+.+....+
T Consensus 397 ~~kFDVVIgN--PPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s~Lf~sg 474 (878)
T 3s1s_A 397 FANVSVVVMN--PPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQYLTAQG 474 (878)
T ss_dssp GTTEEEEEEC--CBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETHHHHCCS
T ss_pred cCCCCEEEEC--CCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChHHhccCC
Confidence 4679999998 56632111 0 0111 2346899999999999999998755443
Q ss_pred --HHHHHHHHHHc
Q 014711 354 --MLRMKQQFLEY 364 (420)
Q Consensus 354 --~~~~~~~l~~~ 364 (420)
...+++.+.+.
T Consensus 475 ~~~kkLRk~LLe~ 487 (878)
T 3s1s_A 475 NESKAFREFLVGN 487 (878)
T ss_dssp HHHHHHHHHHTTT
T ss_pred hHHHHHHHHHHhC
Confidence 34566665544
No 286
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.52 E-value=2.6e-07 Score=88.68 Aligned_cols=59 Identities=15% Similarity=0.127 Sum_probs=52.1
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCC--CeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhh
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKD--LNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATST 292 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~--~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~ 292 (420)
++..|||||||+|.++..|++..+. .+++|+|+++.+++.++++. ..|++++++|+.++
T Consensus 42 ~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~----~~~v~~i~~D~~~~ 102 (279)
T 3uzu_A 42 RGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF----GELLELHAGDALTF 102 (279)
T ss_dssp TTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH----GGGEEEEESCGGGC
T ss_pred CcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc----CCCcEEEECChhcC
Confidence 4678999999999999999998543 55999999999999999983 45899999999886
No 287
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.50 E-value=1.7e-07 Score=89.57 Aligned_cols=73 Identities=14% Similarity=0.083 Sum_probs=59.4
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
++ .|||||||+|.++..|++.. .+|+|+|+++.+++.+++++.. .|++++++|+.++. ++ ....+|.|+.
T Consensus 47 ~~-~VLEIG~G~G~lt~~L~~~~--~~V~avEid~~~~~~l~~~~~~---~~v~vi~~D~l~~~---~~-~~~~~~~iv~ 116 (271)
T 3fut_A 47 TG-PVFEVGPGLGALTRALLEAG--AEVTAIEKDLRLRPVLEETLSG---LPVRLVFQDALLYP---WE-EVPQGSLLVA 116 (271)
T ss_dssp CS-CEEEECCTTSHHHHHHHHTT--CCEEEEESCGGGHHHHHHHTTT---SSEEEEESCGGGSC---GG-GSCTTEEEEE
T ss_pred CC-eEEEEeCchHHHHHHHHHcC--CEEEEEECCHHHHHHHHHhcCC---CCEEEEECChhhCC---hh-hccCccEEEe
Confidence 35 89999999999999999984 7899999999999999998752 58999999998862 11 0124688888
Q ss_pred eCC
Q 014711 310 QCP 312 (420)
Q Consensus 310 ~fp 312 (420)
|.|
T Consensus 117 NlP 119 (271)
T 3fut_A 117 NLP 119 (271)
T ss_dssp EEC
T ss_pred cCc
Confidence 843
No 288
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.45 E-value=1.2e-06 Score=86.98 Aligned_cols=120 Identities=14% Similarity=0.170 Sum_probs=91.9
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHh-----C---CCcEEEEEcChhhhhhhhhccCC
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLS-----G---ITNGYFIATNATSTFRSIVASYP 301 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~-----~---l~nv~~~~~Da~~~~~~~~~~~~ 301 (420)
++.+||=||-|.|..+.++.+. |..+++.+||++..++.|++..... . -++++++.+|+..++.+... ..
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh-~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~-~~ 282 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKL-KPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAK-EG 282 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTT-CCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHH-HT
T ss_pred CCCeEEEECCCcHHHHHHHHhc-CCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhh-cc
Confidence 4678999999999999999875 5589999999999999999875321 1 13599999999998754321 24
Q ss_pred CeEeEEEEeCCCCCCCC--cchhhhhhHHHHHHHHHhhccCCeEEEEEeCcH
Q 014711 302 GKLILVSIQCPNPDFNR--PEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIE 351 (420)
Q Consensus 302 ~~~d~i~~~fpdp~~k~--~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~ 351 (420)
..||.|++..+||.... ......++.++|++.+.+.|+|||.++.++...
T Consensus 283 ~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s~ 334 (381)
T 3c6k_A 283 REFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCV 334 (381)
T ss_dssp CCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEET
T ss_pred CceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecCCC
Confidence 67999999877654221 233446778899999999999999999876543
No 289
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.44 E-value=6.9e-07 Score=84.30 Aligned_cols=58 Identities=17% Similarity=0.233 Sum_probs=51.5
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhh
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATST 292 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~ 292 (420)
++..|||||||+|.++..|++. +..+++|+|+++.+++.++++ ...|++++++|+.++
T Consensus 31 ~~~~VLDiG~G~G~lt~~L~~~-~~~~v~avEid~~~~~~~~~~----~~~~v~~i~~D~~~~ 88 (249)
T 3ftd_A 31 EGNTVVEVGGGTGNLTKVLLQH-PLKKLYVIELDREMVENLKSI----GDERLEVINEDASKF 88 (249)
T ss_dssp TTCEEEEEESCHHHHHHHHTTS-CCSEEEEECCCHHHHHHHTTS----CCTTEEEECSCTTTC
T ss_pred CcCEEEEEcCchHHHHHHHHHc-CCCeEEEEECCHHHHHHHHhc----cCCCeEEEEcchhhC
Confidence 4678999999999999999987 568999999999999999876 346899999999886
No 290
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.43 E-value=2.4e-07 Score=87.96 Aligned_cols=73 Identities=21% Similarity=0.209 Sum_probs=58.4
Q ss_pred CEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHh-------C-C-CcEEEEEcChhhhhhhhhccCCC
Q 014711 232 PLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLS-------G-I-TNGYFIATNATSTFRSIVASYPG 302 (420)
Q Consensus 232 ~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~-------~-l-~nv~~~~~Da~~~~~~~~~~~~~ 302 (420)
.+|||+|||+|..++.+|.+ ..+|+++|+++.+++.++++++.. + + .|++++++|+.++++. + +.
T Consensus 90 ~~VLDl~~G~G~dal~lA~~--g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~-~---~~ 163 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASV--GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTD-I---TP 163 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHH--TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTT-C---SS
T ss_pred CEEEEcCCcCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHh-C---cc
Confidence 78999999999999999998 568999999998877766654432 2 4 5799999999987532 1 34
Q ss_pred eEeEEEEe
Q 014711 303 KLILVSIQ 310 (420)
Q Consensus 303 ~~d~i~~~ 310 (420)
+||.|++.
T Consensus 164 ~fDvV~lD 171 (258)
T 2oyr_A 164 RPQVVYLD 171 (258)
T ss_dssp CCSEEEEC
T ss_pred cCCEEEEc
Confidence 69999885
No 291
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.40 E-value=2.3e-06 Score=82.15 Aligned_cols=123 Identities=10% Similarity=0.012 Sum_probs=90.9
Q ss_pred CCEEEEEcCCccHHHHHHHHhC-----CCCeEEEEeCCh--------------------------HHHHHHHHHhHHhCC
Q 014711 231 QPLVVDIGSGNGLFLLGMARKR-----KDLNFLGLEVNG--------------------------KLVTHCRDSLQLSGI 279 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~~-----P~~~viGiDis~--------------------------~~i~~A~~~~~~~~l 279 (420)
...|||+||..|..++.||+.. |+.+++++|..+ ..++.+++++.+.|+
T Consensus 107 pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~gl 186 (282)
T 2wk1_A 107 PGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYDL 186 (282)
T ss_dssp CCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTTC
T ss_pred CCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcCC
Confidence 5689999999999999998764 588999999642 146788999999997
Q ss_pred --CcEEEEEcChhhhhhhhhccCCCeEeEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCc----HHH
Q 014711 280 --TNGYFIATNATSTFRSIVASYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI----EEV 353 (420)
Q Consensus 280 --~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~----~~~ 353 (420)
++++++.+|+.+.++.. ++.++|.|++-. | ... -....|+.+...|+|||.+++ |+ +..
T Consensus 187 ~~~~I~li~Gda~etL~~~---~~~~~d~vfIDa-D-----~y~----~~~~~Le~~~p~L~pGGiIv~--DD~~~~~G~ 251 (282)
T 2wk1_A 187 LDEQVRFLPGWFKDTLPTA---PIDTLAVLRMDG-D-----LYE----STWDTLTNLYPKVSVGGYVIV--DDYMMCPPC 251 (282)
T ss_dssp CSTTEEEEESCHHHHSTTC---CCCCEEEEEECC-C-----SHH----HHHHHHHHHGGGEEEEEEEEE--SSCTTCHHH
T ss_pred CcCceEEEEeCHHHHHhhC---CCCCEEEEEEcC-C-----ccc----cHHHHHHHHHhhcCCCEEEEE--cCCCCCHHH
Confidence 68999999998876532 356899998852 2 100 113789999999999999987 44 333
Q ss_pred HHHHHHHHHHcCCce
Q 014711 354 MLRMKQQFLEYGKGK 368 (420)
Q Consensus 354 ~~~~~~~l~~~g~~~ 368 (420)
.+.+.+.++++++..
T Consensus 252 ~~Av~Ef~~~~~i~~ 266 (282)
T 2wk1_A 252 KDAVDEYRAKFDIAD 266 (282)
T ss_dssp HHHHHHHHHHTTCCS
T ss_pred HHHHHHHHHhcCCce
Confidence 344555556666543
No 292
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.34 E-value=5.1e-07 Score=94.53 Aligned_cols=129 Identities=15% Similarity=0.038 Sum_probs=90.4
Q ss_pred CEEEEEcCCccHHHHHHHHhCC---------------CCeEEEEeCChHHHHHHHHHhHHhCCC-cEEEEEcChhhhhhh
Q 014711 232 PLVVDIGSGNGLFLLGMARKRK---------------DLNFLGLEVNGKLVTHCRDSLQLSGIT-NGYFIATNATSTFRS 295 (420)
Q Consensus 232 ~~vLDIGcG~G~~~~~lA~~~P---------------~~~viGiDis~~~i~~A~~~~~~~~l~-nv~~~~~Da~~~~~~ 295 (420)
.+|+|.+||+|.+++.+++..+ ..+++|+|+++.++..|+.++..+++. ++.+.++|.... +
T Consensus 246 ~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~-~- 323 (544)
T 3khk_A 246 GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLD-D- 323 (544)
T ss_dssp EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTS-C-
T ss_pred CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhcC-c-
Confidence 4899999999999998865432 468999999999999999999888875 444478887653 1
Q ss_pred hhccCCCeEeEEEEeCCCCCCCCc-ch-----hhhh-----------------hHHHHHHHHHhhccCCeEEEEEeCcHH
Q 014711 296 IVASYPGKLILVSIQCPNPDFNRP-EH-----RWRM-----------------VQRSLVEAVSDLLVHDGKVFLQSDIEE 352 (420)
Q Consensus 296 ~~~~~~~~~d~i~~~fpdp~~k~~-~~-----k~Rl-----------------~~~~~l~~i~~~LkpgG~l~~~td~~~ 352 (420)
.+ .+..||.|+.| .|+.... .. ..|. .+-.|+..+.+.|+|||++.+.+.+..
T Consensus 324 ~~--~~~~fD~Iv~N--PPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~g~ 399 (544)
T 3khk_A 324 QH--PDLRADFVMTN--PPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLANGS 399 (544)
T ss_dssp SC--TTCCEEEEEEC--CCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEETHH
T ss_pred cc--ccccccEEEEC--CCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEecchh
Confidence 11 35689999998 4553211 00 0010 112699999999999999888764322
Q ss_pred ------HHHHHHHHHHHcCC
Q 014711 353 ------VMLRMKQQFLEYGK 366 (420)
Q Consensus 353 ------~~~~~~~~l~~~g~ 366 (420)
....+++.+.+.+.
T Consensus 400 L~~~~~~~~~iRk~Lle~~~ 419 (544)
T 3khk_A 400 MSSNTNNEGEIRKTLVEQDL 419 (544)
T ss_dssp HHCCGGGHHHHHHHHHHTTC
T ss_pred hhcCcchHHHHHHHHHhCCc
Confidence 23457776666553
No 293
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.22 E-value=8.9e-07 Score=83.71 Aligned_cols=77 Identities=13% Similarity=0.047 Sum_probs=56.2
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhh-hhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTF-RSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~-~~~~~~~~~~~d~i~ 308 (420)
.+..|||||||+|.++. +++ .+..+++|+|+++.+++.+++++.. ..|++++++|+.++. ++.+. .+...+.|+
T Consensus 21 ~~~~VLEIG~G~G~lt~-l~~-~~~~~v~avEid~~~~~~a~~~~~~--~~~v~~i~~D~~~~~~~~~~~-~~~~~~~vv 95 (252)
T 1qyr_A 21 KGQAMVEIGPGLAALTE-PVG-ERLDQLTVIELDRDLAARLQTHPFL--GPKLTIYQQDAMTFNFGELAE-KMGQPLRVF 95 (252)
T ss_dssp TTCCEEEECCTTTTTHH-HHH-TTCSCEEEECCCHHHHHHHHTCTTT--GGGEEEECSCGGGCCHHHHHH-HHTSCEEEE
T ss_pred CcCEEEEECCCCcHHHH-hhh-CCCCeEEEEECCHHHHHHHHHHhcc--CCceEEEECchhhCCHHHhhc-ccCCceEEE
Confidence 35789999999999999 654 4434499999999999999887653 258999999998851 22220 012346777
Q ss_pred EeC
Q 014711 309 IQC 311 (420)
Q Consensus 309 ~~f 311 (420)
.|.
T Consensus 96 sNl 98 (252)
T 1qyr_A 96 GNL 98 (252)
T ss_dssp EEC
T ss_pred ECC
Confidence 774
No 294
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.08 E-value=1.2e-05 Score=85.26 Aligned_cols=101 Identities=14% Similarity=0.188 Sum_probs=72.5
Q ss_pred CCEEEEEcCCccHH---HHHHHHhC-CCCeEEEEeCChHHHHHHHHHhHHhCCCc-EEEEEcChhhhhhhhhccCCCeEe
Q 014711 231 QPLVVDIGSGNGLF---LLGMARKR-KDLNFLGLEVNGKLVTHCRDSLQLSGITN-GYFIATNATSTFRSIVASYPGKLI 305 (420)
Q Consensus 231 ~~~vLDIGcG~G~~---~~~lA~~~-P~~~viGiDis~~~i~~A~~~~~~~~l~n-v~~~~~Da~~~~~~~~~~~~~~~d 305 (420)
..+|||||||+|-+ ++..+++. -..+|+++|.|+ +...|++...+++..+ |+++++|++++. .++.+|
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~~dkVtVI~gd~eev~------LPEKVD 430 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEWGSQVTVVSSDMREWV------APEKAD 430 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTTGGGEEEEESCTTTCC------CSSCEE
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccCCCeEEEEeCcceecc------CCcccC
Confidence 35899999999988 44444442 234789999997 5667888888888875 999999999872 367899
Q ss_pred EEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEE
Q 014711 306 LVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKV 344 (420)
Q Consensus 306 ~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l 344 (420)
.|+.-...-. -..+ .+ ++.+....+.|||||.+
T Consensus 431 IIVSEwMG~f-Ll~E---~m--levL~Ardr~LKPgGim 463 (637)
T 4gqb_A 431 IIVSELLGSF-ADNE---LS--PECLDGAQHFLKDDGVS 463 (637)
T ss_dssp EEECCCCBTT-BGGG---CH--HHHHHHHGGGEEEEEEE
T ss_pred EEEEEcCccc-cccc---CC--HHHHHHHHHhcCCCcEE
Confidence 9976432221 0001 11 46788889999999985
No 295
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.08 E-value=2.5e-05 Score=78.07 Aligned_cols=167 Identities=11% Similarity=0.091 Sum_probs=103.2
Q ss_pred CCEEEEEcCCccHHHHHHHHh-----------------CCCCeEEEEeCC-----------hHHHHHHHHHhHHhCC-Cc
Q 014711 231 QPLVVDIGSGNGLFLLGMARK-----------------RKDLNFLGLEVN-----------GKLVTHCRDSLQLSGI-TN 281 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~-----------------~P~~~viGiDis-----------~~~i~~A~~~~~~~~l-~n 281 (420)
..+|+|+||++|..++.+... .|+.+|+.-|+- +...+.+++ ..+. .+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~---~~g~~~~ 129 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEK---ENGRKIG 129 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHH---HTCCCTT
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhh---hccCCCC
Confidence 578999999999999887765 578899999988 444433222 1221 23
Q ss_pred EEEEEcChhhhhhhhhccCCCeEeEEEEeCCCCCCCCcchh-----------hh----------h-------hH---HHH
Q 014711 282 GYFIATNATSTFRSIVASYPGKLILVSIQCPNPDFNRPEHR-----------WR----------M-------VQ---RSL 330 (420)
Q Consensus 282 v~~~~~Da~~~~~~~~~~~~~~~d~i~~~fpdp~~k~~~~k-----------~R----------l-------~~---~~~ 330 (420)
-.|+.+....+....| +++++|.++.++.-.|..+.... .+ + .+ ..|
T Consensus 130 ~~f~~gvpgSFy~rlf--p~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~F 207 (384)
T 2efj_A 130 SCLIGAMPGSFYSRLF--PEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTF 207 (384)
T ss_dssp SEEEEECCSCTTSCCS--CTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEecchhhhhccC--CCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 4777787777655556 68999999999877774432100 00 0 00 356
Q ss_pred HHHHHhhccCCeEEEEEe---CcH--H-----HHHHHHHHHHHcCCceeEeeccccccccCCCCCCCCCCCCCC--CHHH
Q 014711 331 VEAVSDLLVHDGKVFLQS---DIE--E-----VMLRMKQQFLEYGKGKLVLVQDECDTKTNQGGWLGENSFGVR--SDWE 398 (420)
Q Consensus 331 l~~i~~~LkpgG~l~~~t---d~~--~-----~~~~~~~~l~~~g~~~~~~~~D~~~~~~~~~~~~~~~~~~~~--T~~E 398 (420)
|+..++.|+|||++++.+ ++. . ....+++.+...|.-..+ .-|- + ..|...+ .+++
T Consensus 208 L~~Ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~e-k~ds---------f--~~P~y~ps~~E~~ 275 (384)
T 2efj_A 208 LRIHSEELISRGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEE-KLDS---------F--NVPIYAPSTEEVK 275 (384)
T ss_dssp HHHHHHHEEEEEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHH-HHHT---------C--CCSBCCCCHHHHH
T ss_pred HHHHHHHhccCCeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCCcchh-hhcc---------c--CCcccCCCHHHHH
Confidence 888899999999999985 222 2 455566666666642211 1111 1 1233334 4555
Q ss_pred HHHHHCC-CCeEEEEEE
Q 014711 399 QHVIDRG-APMYRLMLS 414 (420)
Q Consensus 399 ~~~~~~G-~~i~~~~~~ 414 (420)
....+.| +.|.++...
T Consensus 276 ~~le~~g~F~i~~le~~ 292 (384)
T 2efj_A 276 RIVEEEGSFEILYLETF 292 (384)
T ss_dssp HHHHHHCSEEEEEEEEE
T ss_pred HHHHHcCCceEEEEEEE
Confidence 5566665 577776544
No 296
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.00 E-value=1.9e-05 Score=78.66 Aligned_cols=117 Identities=13% Similarity=0.104 Sum_probs=74.9
Q ss_pred CCCEEEEEcCCccHHHHHHHH--------hC-------CCCeEEEEeCChHHHHHHHHHhHHhC-----------C-CcE
Q 014711 230 AQPLVVDIGSGNGLFLLGMAR--------KR-------KDLNFLGLEVNGKLVTHCRDSLQLSG-----------I-TNG 282 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~--------~~-------P~~~viGiDis~~~i~~A~~~~~~~~-----------l-~nv 282 (420)
...+|+|+|||+|..++.+.. ++ |+.+|+.-|+-.......-+.+.... . .+-
T Consensus 52 ~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~ 131 (374)
T 3b5i_A 52 PPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRS 131 (374)
T ss_dssp CCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBC
T ss_pred CceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCc
Confidence 357899999999999988732 22 67778888877666554444433210 0 011
Q ss_pred EEEEcChhhhhhhhhccCCCeEeEEEEeCCCCCCCCcchhh-----------h------------h-------hHHHHHH
Q 014711 283 YFIATNATSTFRSIVASYPGKLILVSIQCPNPDFNRPEHRW-----------R------------M-------VQRSLVE 332 (420)
Q Consensus 283 ~~~~~Da~~~~~~~~~~~~~~~d~i~~~fpdp~~k~~~~k~-----------R------------l-------~~~~~l~ 332 (420)
.|+.+....+....| +++++|.|+.++.-.|..+....- + . .-..||+
T Consensus 132 ~f~~gvpgSFy~rlf--P~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~ 209 (374)
T 3b5i_A 132 YFVAGVPGSFYRRLF--PARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLR 209 (374)
T ss_dssp SEEEEEESCTTSCCS--CTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEecChhhhcccC--CCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 344444444433344 589999999998888855322100 0 0 0136789
Q ss_pred HHHhhccCCeEEEEEe
Q 014711 333 AVSDLLVHDGKVFLQS 348 (420)
Q Consensus 333 ~i~~~LkpgG~l~~~t 348 (420)
..++.|+|||++++.+
T Consensus 210 ~ra~eL~pGG~mvl~~ 225 (374)
T 3b5i_A 210 ARAAEVKRGGAMFLVC 225 (374)
T ss_dssp HHHHHEEEEEEEEEEE
T ss_pred HHHHHhCCCCEEEEEE
Confidence 9999999999999875
No 297
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.98 E-value=1.4e-05 Score=68.68 Aligned_cols=85 Identities=13% Similarity=0.205 Sum_probs=61.1
Q ss_pred CCEEEEEcCCcc-HHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 231 QPLVVDIGSGNG-LFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 231 ~~~vLDIGcG~G-~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
..++||||||+| ..+..|+++ .+..|+++|+++.++. |++.|+.+-..+. -..+|.||.
T Consensus 36 ~~rVlEVG~G~g~~vA~~La~~-~g~~V~atDInp~Av~---------------~v~dDiF~P~~~~----Y~~~DLIYs 95 (153)
T 2k4m_A 36 GTRVVEVGAGRFLYVSDYIRKH-SKVDLVLTDIKPSHGG---------------IVRDDITSPRMEI----YRGAALIYS 95 (153)
T ss_dssp SSEEEEETCTTCCHHHHHHHHH-SCCEEEEECSSCSSTT---------------EECCCSSSCCHHH----HTTEEEEEE
T ss_pred CCcEEEEccCCChHHHHHHHHh-CCCeEEEEECCccccc---------------eEEccCCCCcccc----cCCcCEEEE
Confidence 469999999999 699999974 2688999999998775 8899997642211 137999988
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEe
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 348 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~t 348 (420)
+=|.|. +++.+++...++ |.-+++.+
T Consensus 96 irPP~E----------l~~~i~~lA~~v---~adliI~p 121 (153)
T 2k4m_A 96 IRPPAE----------IHSSLMRVADAV---GARLIIKP 121 (153)
T ss_dssp ESCCTT----------THHHHHHHHHHH---TCEEEEEC
T ss_pred cCCCHH----------HHHHHHHHHHHc---CCCEEEEc
Confidence 756553 444454444333 67777765
No 298
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.96 E-value=2e-05 Score=83.72 Aligned_cols=108 Identities=9% Similarity=-0.020 Sum_probs=73.0
Q ss_pred CCEEEEEcCCccHHHHH---HHH-hC---------CCCeEEEEeCChHHHHHHHHHhHHhCCCc-EEEEEcChhhhhhhh
Q 014711 231 QPLVVDIGSGNGLFLLG---MAR-KR---------KDLNFLGLEVNGKLVTHCRDSLQLSGITN-GYFIATNATSTFRSI 296 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~---lA~-~~---------P~~~viGiDis~~~i~~A~~~~~~~~l~n-v~~~~~Da~~~~~~~ 296 (420)
..+|||||||+|-+... .++ .. ...+|+++|.|+.++...+++.. ++..+ |+++++|++++....
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~d~VtVI~gd~eev~lp~ 488 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWKRRVTIIESDMRSLPGIA 488 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTTTCSEEEESCGGGHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCCCeEEEEeCchhhccccc
Confidence 46899999999999632 222 11 24599999999988866665553 77765 999999999883100
Q ss_pred hccCCCeEeEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEE
Q 014711 297 VASYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVF 345 (420)
Q Consensus 297 ~~~~~~~~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~ 345 (420)
-...++.+|.|+.-...-. - ...+.++.|..+.+.|||||.++
T Consensus 489 ~~~~~ekVDIIVSElmGsf-l-----~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 489 KDRGFEQPDIIVSELLGSF-G-----DNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHTTCCCCSEEEECCCBTT-B-----GGGSHHHHHHTTGGGSCTTCEEE
T ss_pred ccCCCCcccEEEEeccccc-c-----chhccHHHHHHHHHhCCCCcEEE
Confidence 0002567999976533221 0 01134688888899999999753
No 299
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=97.93 E-value=3e-05 Score=73.94 Aligned_cols=73 Identities=15% Similarity=0.152 Sum_probs=60.2
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhcc-CCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVAS-YPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~-~~~~~d~i~ 308 (420)
++.++||.+||.|.++..++++ +.+++|+|.++.+++.|++ +.. .+++++++|..++ ..++.. ...++|.|+
T Consensus 22 ~gg~~VD~T~G~GGHS~~il~~--~g~VigiD~Dp~Ai~~A~~-L~~---~rv~lv~~~f~~l-~~~L~~~g~~~vDgIL 94 (285)
T 1wg8_A 22 PGGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAKG-LHL---PGLTVVQGNFRHL-KRHLAALGVERVDGIL 94 (285)
T ss_dssp TTCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHH-TCC---TTEEEEESCGGGH-HHHHHHTTCSCEEEEE
T ss_pred CCCEEEEeCCCCcHHHHHHHHC--CCEEEEEeCCHHHHHHHHh-hcc---CCEEEEECCcchH-HHHHHHcCCCCcCEEE
Confidence 4679999999999999999998 7899999999999999988 643 5899999999987 333321 235799987
Q ss_pred E
Q 014711 309 I 309 (420)
Q Consensus 309 ~ 309 (420)
+
T Consensus 95 ~ 95 (285)
T 1wg8_A 95 A 95 (285)
T ss_dssp E
T ss_pred e
Confidence 5
No 300
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.89 E-value=3.2e-05 Score=76.64 Aligned_cols=173 Identities=12% Similarity=0.099 Sum_probs=108.4
Q ss_pred CCCEEEEEcCCccHHHHHHHHh----------------CCCCeEEEEeCChHHHHHHHHHhHHhCC-CcEEEEEcChhhh
Q 014711 230 AQPLVVDIGSGNGLFLLGMARK----------------RKDLNFLGLEVNGKLVTHCRDSLQLSGI-TNGYFIATNATST 292 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~----------------~P~~~viGiDis~~~i~~A~~~~~~~~l-~nv~~~~~Da~~~ 292 (420)
+..+|+|+||++|..++.+... .|+.+|+.-|+-.......-+.+..... .+-.|+.+....+
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSF 130 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSF 130 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCS
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhh
Confidence 3467999999999887655443 5788999999999988888777643211 1346777776665
Q ss_pred hhhhhccCCCeEeEEEEeCCCCCCCCcchh----------------------hhhhH---HHHHHHHHhhccCCeEEEEE
Q 014711 293 FRSIVASYPGKLILVSIQCPNPDFNRPEHR----------------------WRMVQ---RSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 293 ~~~~~~~~~~~~d~i~~~fpdp~~k~~~~k----------------------~Rl~~---~~~l~~i~~~LkpgG~l~~~ 347 (420)
....| +++++|.++.++.-.|..+.... .+..+ ..||+..++.|+|||++++.
T Consensus 131 y~rlf--p~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~ 208 (359)
T 1m6e_X 131 YGRLF--PRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLT 208 (359)
T ss_dssp SSCCS--CTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEE
T ss_pred hhccC--CCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEE
Confidence 44555 68999999999877775432100 00011 46899999999999999997
Q ss_pred eC---c-----------HHHHHHHHHHHHHcCCceeEeeccccccccCCCCCCCCCCCCCCCHHHHHHHHCCC-CeEEEE
Q 014711 348 SD---I-----------EEVMLRMKQQFLEYGKGKLVLVQDECDTKTNQGGWLGENSFGVRSDWEQHVIDRGA-PMYRLM 412 (420)
Q Consensus 348 td---~-----------~~~~~~~~~~l~~~g~~~~~~~~D~~~~~~~~~~~~~~~~~~~~T~~E~~~~~~G~-~i~~~~ 412 (420)
+- + ......+++.+...|.-..+ .-|- +..+.-+.-..+|.....+.|. .|.++.
T Consensus 209 ~~gr~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~e-k~d~---------f~~P~y~ps~~E~~~~ie~~G~F~i~~~e 278 (359)
T 1m6e_X 209 ILGRRSEDRASTECCLIWQLLAMALNQMVSEGLIEEE-KMDK---------FNIPQYTPSPTEVEAEILKEGSFLIDHIE 278 (359)
T ss_dssp EEECSSSSSSSTTTSTTTHHHHHHHHHHHHTTCSCCS-TTGG---------GCCCCBCCCSHHHHHHHHHTTTBCCEEEE
T ss_pred EecCCCCCccccchHHHHHHHHHHHHHHHHccccchh-hhhc---------cCCCccCCCHHHHHHHHHHcCCceEEEEE
Confidence 51 1 11233444444555642111 1121 1122223445667777777765 887765
Q ss_pred EE
Q 014711 413 LS 414 (420)
Q Consensus 413 ~~ 414 (420)
..
T Consensus 279 ~~ 280 (359)
T 1m6e_X 279 AS 280 (359)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 301
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=97.89 E-value=1.5e-05 Score=75.56 Aligned_cols=124 Identities=12% Similarity=0.065 Sum_probs=74.9
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
.+.+|||+|||.|.++...+++.+...+.|+|++.++....... ...+. |+..++.++... .+ .+..+|.|..
T Consensus 74 ~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~-~~~g~-~ii~~~~~~dv~---~l--~~~~~DlVls 146 (277)
T 3evf_A 74 LEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNV-QSLGW-NIITFKDKTDIH---RL--EPVKCDTLLC 146 (277)
T ss_dssp CCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCC-CBTTG-GGEEEECSCCTT---TS--CCCCCSEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCccccccc-CcCCC-CeEEEeccceeh---hc--CCCCccEEEe
Confidence 35689999999999999999887777889999985531100000 00111 545556665322 12 4678999987
Q ss_pred eCCCCCCCCcchhhh-hhHHHHHHHHHhhccCC-eEEEEEeCc---HHHHHHHHHHHHHc
Q 014711 310 QCPNPDFNRPEHRWR-MVQRSLVEAVSDLLVHD-GKVFLQSDI---EEVMLRMKQQFLEY 364 (420)
Q Consensus 310 ~fpdp~~k~~~~k~R-l~~~~~l~~i~~~Lkpg-G~l~~~td~---~~~~~~~~~~l~~~ 364 (420)
... | ...++... .-+-.+|+.+.++|+|| |.|++..=. +. ..+.++.|+.+
T Consensus 147 D~a-p--nsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~pyg~~-~~~l~~~lk~~ 202 (277)
T 3evf_A 147 DIG-E--SSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLAPYMPD-VLEKLELLQRR 202 (277)
T ss_dssp CCC-C--CCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCTTSHH-HHHHHHHHHHH
T ss_pred cCc-c--CcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCCCCcc-HHHHHHHHHHh
Confidence 532 1 12222111 11124588999999999 999998633 33 33345555543
No 302
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=97.79 E-value=0.00019 Score=69.27 Aligned_cols=129 Identities=12% Similarity=0.019 Sum_probs=82.1
Q ss_pred CCEEEEEcCCccHHHHHHH----HhCCCC--eEEEEeCCh--------HHH-HHHHHHhHH---hCCC--cEEEEEcChh
Q 014711 231 QPLVVDIGSGNGLFLLGMA----RKRKDL--NFLGLEVNG--------KLV-THCRDSLQL---SGIT--NGYFIATNAT 290 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA----~~~P~~--~viGiDis~--------~~i-~~A~~~~~~---~~l~--nv~~~~~Da~ 290 (420)
.-+|||+|+|+|...+... +..|+. +++.+|..+ ... +..+..... ..-. .+.+..+|+.
T Consensus 97 ~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa~ 176 (308)
T 3vyw_A 97 VIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDAR 176 (308)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCHH
T ss_pred CcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechHH
Confidence 4679999999998654322 336664 578888532 111 112111111 1112 3678999999
Q ss_pred hhhhhhhccCCCeEeEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHHHHHHHHHHHHcCCceeE
Q 014711 291 STFRSIVASYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGKLV 370 (420)
Q Consensus 291 ~~~~~~~~~~~~~~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~~~~~~~~l~~~g~~~~~ 370 (420)
+.++.+ ....+|.+|+ |+....+.+ .+=++++++.++++++|||+|.-.|- ...+++.|.+.||.+..
T Consensus 177 ~~l~~l---~~~~~Da~fl---DgFsP~kNP--eLWs~e~f~~l~~~~~pgg~laTYta----ag~VRR~L~~aGF~V~k 244 (308)
T 3vyw_A 177 KRIKEV---ENFKADAVFH---DAFSPYKNP--ELWTLDFLSLIKERIDEKGYWVSYSS----SLSVRKSLLTLGFKVGS 244 (308)
T ss_dssp HHGGGC---CSCCEEEEEE---CCSCTTTSG--GGGSHHHHHHHHTTEEEEEEEEESCC----CHHHHHHHHHTTCEEEE
T ss_pred HHHhhh---cccceeEEEe---CCCCcccCc--ccCCHHHHHHHHHHhCCCcEEEEEeC----cHHHHHHHHHCCCEEEe
Confidence 886543 2457999987 443222222 24457999999999999999875442 34588899999998654
Q ss_pred e
Q 014711 371 L 371 (420)
Q Consensus 371 ~ 371 (420)
+
T Consensus 245 ~ 245 (308)
T 3vyw_A 245 S 245 (308)
T ss_dssp E
T ss_pred c
Confidence 3
No 303
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.70 E-value=3e-05 Score=73.70 Aligned_cols=124 Identities=9% Similarity=-0.031 Sum_probs=74.5
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
.+..|||+|||.|.++...+++.+...++|+|++.++...+... ...+ .|+..++.++... .+ ....+|.|.+
T Consensus 90 ~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~-~~~g-~~ii~~~~~~dv~---~l--~~~~~DvVLS 162 (282)
T 3gcz_A 90 PTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMR-TTLG-WNLIRFKDKTDVF---NM--EVIPGDTLLC 162 (282)
T ss_dssp CCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC-CBTT-GGGEEEECSCCGG---GS--CCCCCSEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccccc-ccCC-CceEEeeCCcchh---hc--CCCCcCEEEe
Confidence 35689999999999999999888888899999987642222110 0112 2333334332211 12 4678999977
Q ss_pred eCCCCCCCCcchhh-hhhHHHHHHHHHhhccCC--eEEEEEeCc---HHHHHHHHHHHHHc
Q 014711 310 QCPNPDFNRPEHRW-RMVQRSLVEAVSDLLVHD--GKVFLQSDI---EEVMLRMKQQFLEY 364 (420)
Q Consensus 310 ~fpdp~~k~~~~k~-Rl~~~~~l~~i~~~Lkpg--G~l~~~td~---~~~~~~~~~~l~~~ 364 (420)
.. -|...++.. ..-+-.+|+.+.++|+|| |.|++..=. +.+ .+.++.|+.+
T Consensus 163 Dm---ApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~pyg~~~-~~l~~~lk~~ 219 (282)
T 3gcz_A 163 DI---GESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLCPYTPLI-MEELSRLQLK 219 (282)
T ss_dssp CC---CCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESCCCSHHH-HHHHHHHHHH
T ss_pred cC---ccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEecCCCccH-HHHHHHHHHh
Confidence 42 222222211 111124588889999999 999998633 333 3445555543
No 304
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.48 E-value=0.00019 Score=69.08 Aligned_cols=47 Identities=21% Similarity=0.263 Sum_probs=42.4
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhC
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSG 278 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~ 278 (420)
.+.+|||++||+|..++.+++. +.+++|+|+++.+++.|++++.+..
T Consensus 235 ~~~~vlD~f~GsGt~~~~a~~~--g~~~~g~e~~~~~~~~a~~r~~~~~ 281 (297)
T 2zig_A 235 VGDVVLDPFAGTGTTLIAAARW--GRRALGVELVPRYAQLAKERFAREV 281 (297)
T ss_dssp TTCEEEETTCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHS
T ss_pred CCCEEEECCCCCCHHHHHHHHc--CCeEEEEeCCHHHHHHHHHHHHHhc
Confidence 5789999999999999998887 6799999999999999999987653
No 305
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.48 E-value=0.00042 Score=72.22 Aligned_cols=130 Identities=15% Similarity=0.137 Sum_probs=88.1
Q ss_pred CCEEEEEcCCccHHHHHHHHhC-------------CCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhh-hhh
Q 014711 231 QPLVVDIGSGNGLFLLGMARKR-------------KDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTF-RSI 296 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~~-------------P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~-~~~ 296 (420)
+.+|+|-+||+|.|++...+.. ...+++|+|+++.+...|+-++.-+|..+-.+.++|..... .+.
T Consensus 218 ~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~~~~I~~~dtL~~~~~~~ 297 (530)
T 3ufb_A 218 GESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEYPRIDPENSLRFPLREM 297 (530)
T ss_dssp TCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCSCCEEECSCTTCSCGGGC
T ss_pred CCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCccccccccccccCchhhh
Confidence 5689999999999998876531 13579999999999999999988888877778888876531 111
Q ss_pred hccCCCeEeEEEEeCCCCCCCCcch--hhh--------hhHHHHHHHHHhhcc-------CCeEEEEEeCcHHH-----H
Q 014711 297 VASYPGKLILVSIQCPNPDFNRPEH--RWR--------MVQRSLVEAVSDLLV-------HDGKVFLQSDIEEV-----M 354 (420)
Q Consensus 297 ~~~~~~~~d~i~~~fpdp~~k~~~~--k~R--------l~~~~~l~~i~~~Lk-------pgG~l~~~td~~~~-----~ 354 (420)
. ....||.|..| .|+-..... ..+ -.+-.|+..+.+.|| |||++.+.+.+-.+ .
T Consensus 298 ~--~~~~fD~Il~N--PPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP~g~Lf~~~~~ 373 (530)
T 3ufb_A 298 G--DKDRVDVILTN--PPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVPNGTLFSDGIS 373 (530)
T ss_dssp C--GGGCBSEEEEC--CCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEEEHHHHHCCTHH
T ss_pred c--ccccceEEEec--CCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEecchhhhccchH
Confidence 1 23579999998 454221110 001 112467888888887 69999887643222 2
Q ss_pred HHHHHHHHHc
Q 014711 355 LRMKQQFLEY 364 (420)
Q Consensus 355 ~~~~~~l~~~ 364 (420)
..+++.+-+.
T Consensus 374 ~~iRk~Lle~ 383 (530)
T 3ufb_A 374 ARIKEELLKN 383 (530)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHhhc
Confidence 3466655544
No 306
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.41 E-value=0.0002 Score=68.41 Aligned_cols=123 Identities=11% Similarity=0.021 Sum_probs=72.2
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEc-ChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIAT-NATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~-Da~~~~~~~~~~~~~~~d~i~ 308 (420)
++..|||+||++|.++..++++.+-..++|+|+...+...... ....+..-+.+... |+..+ ....+|.|.
T Consensus 81 ~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~-~~~~~~~iv~~~~~~di~~l-------~~~~~DlVl 152 (300)
T 3eld_A 81 ITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH-MQTLGWNIVKFKDKSNVFTM-------PTEPSDTLL 152 (300)
T ss_dssp CCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-CCBTTGGGEEEECSCCTTTS-------CCCCCSEEE
T ss_pred CCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc-ccccCCceEEeecCceeeec-------CCCCcCEEe
Confidence 4789999999999999999987777789999998643110000 00011111333322 32221 356899997
Q ss_pred EeCCCCCCCCcchhh-hhhHHHHHHHHHhhccCC-eEEEEEeC---cHHHHHHHHHHHHHc
Q 014711 309 IQCPNPDFNRPEHRW-RMVQRSLVEAVSDLLVHD-GKVFLQSD---IEEVMLRMKQQFLEY 364 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~-Rl~~~~~l~~i~~~Lkpg-G~l~~~td---~~~~~~~~~~~l~~~ 364 (420)
... -|...++.. ...+-.+|..+.++|+|| |.|++..= .+.+ ...++.|+.+
T Consensus 153 sD~---APnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~~yG~~~-~~ll~~lk~~ 209 (300)
T 3eld_A 153 CDI---GESSSNPLVERDRTMKVLENFERWKHVNTENFCVKVLAPYHPDV-IEKLERLQLR 209 (300)
T ss_dssp ECC---CCCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESSTTSHHH-HHHHHHHHHH
T ss_pred ecC---cCCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeccccCccH-HHHHHHHHHh
Confidence 742 222222211 111235688889999999 99999862 3332 3345555543
No 307
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.21 E-value=0.00068 Score=64.62 Aligned_cols=109 Identities=15% Similarity=0.091 Sum_probs=70.4
Q ss_pred CCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEc-ChhhhhhhhhccCCCeEeEEEE
Q 014711 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIAT-NATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~-Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
+..|||+||++|.++...+.+..-..|+|+|+-..--+.= ...+..+.+.|.|.+. |+..+ .+..+|.|.+
T Consensus 95 ~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P-~~~~ql~w~lV~~~~~~Dv~~l-------~~~~~D~ivc 166 (321)
T 3lkz_A 95 VGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEP-QLVQSYGWNIVTMKSGVDVFYR-------PSECCDTLLC 166 (321)
T ss_dssp CEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCC-CCCCBTTGGGEEEECSCCTTSS-------CCCCCSEEEE
T ss_pred CCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCc-chhhhcCCcceEEEeccCHhhC-------CCCCCCEEEE
Confidence 5699999999999999888887666899999986511000 0001223345889887 88665 3466899887
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCC-eEEEEEeC
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHD-GKVFLQSD 349 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~Lkpg-G~l~~~td 349 (420)
.--..-+...-...|-+ ..|+.+.++|++| |.|++..=
T Consensus 167 DigeSs~~~~ve~~Rtl--~vLel~~~wL~~~~~~f~~KVl 205 (321)
T 3lkz_A 167 DIGESSSSAEVEEHRTI--RVLEMVEDWLHRGPREFCVKVL 205 (321)
T ss_dssp CCCCCCSCHHHHHHHHH--HHHHHHHHHHTTCCCEEEEEES
T ss_pred ECccCCCChhhhhhHHH--HHHHHHHHHhccCCCcEEEEEc
Confidence 53211100000111211 4788889999999 99999863
No 308
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=97.19 E-value=0.0013 Score=70.60 Aligned_cols=131 Identities=11% Similarity=0.084 Sum_probs=85.4
Q ss_pred CCEEEEEcCCccHHHHHHHHhC-------CC-----CeEEEEeC---ChHHHHHHHH-----------HhHHh-----C-
Q 014711 231 QPLVVDIGSGNGLFLLGMARKR-------KD-----LNFLGLEV---NGKLVTHCRD-----------SLQLS-----G- 278 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~~-------P~-----~~viGiDi---s~~~i~~A~~-----------~~~~~-----~- 278 (420)
.-+|+|+|+|+|...+.+.+.+ |+ .+|+.+|. +.+-+..|.+ .+..+ |
T Consensus 59 ~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 138 (689)
T 3pvc_A 59 SCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAGC 138 (689)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSEE
T ss_pred ceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCCc
Confidence 4689999999999988776542 33 67999999 4444444322 11111 1
Q ss_pred ----C----CcEEEEEcChhhhhhhhhccCCCeEeEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCc
Q 014711 279 ----I----TNGYFIATNATSTFRSIVASYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI 350 (420)
Q Consensus 279 ----l----~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~ 350 (420)
+ -.++++.+|+.+.++.+.......+|.+|+. +....+.+ .+-+.+++..+.++++|||++.-.+-.
T Consensus 139 ~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD---~f~p~~np--~~w~~~~~~~l~~~~~~g~~~~t~~~~ 213 (689)
T 3pvc_A 139 HRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLD---GFAPAKNP--DMWNEQLFNAMARMTRPGGTFSTFTAA 213 (689)
T ss_dssp EEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEEC---SSCC--CC--TTCSHHHHHHHHHHEEEEEEEEESCCC
T ss_pred eEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEEC---CCCCCCCh--hhhhHHHHHHHHHHhCCCCEEEeccCc
Confidence 1 1478999999988754311114679999873 32111111 133468999999999999998765532
Q ss_pred HHHHHHHHHHHHHcCCceeE
Q 014711 351 EEVMLRMKQQFLEYGKGKLV 370 (420)
Q Consensus 351 ~~~~~~~~~~l~~~g~~~~~ 370 (420)
..+++.+.+.|+....
T Consensus 214 ----~~vr~~l~~aGf~~~~ 229 (689)
T 3pvc_A 214 ----GFVRRGLQQAGFNVTK 229 (689)
T ss_dssp ----HHHHHHHHHTTCEEEE
T ss_pred ----HHHHHHHHhCCeEEEe
Confidence 3578888899987543
No 309
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.14 E-value=0.00032 Score=64.89 Aligned_cols=107 Identities=15% Similarity=0.146 Sum_probs=72.1
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEc-ChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIAT-NATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~-Da~~~~~~~~~~~~~~~d~i~ 308 (420)
.+..|||+||++|.++...+.+.....|+|+|+-..--+.= ...+..|...++|.++ |...+ ++.++|.|.
T Consensus 78 ~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P-~~~~s~gwn~v~fk~gvDv~~~-------~~~~~Dtll 149 (267)
T 3p8z_A 78 PEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEP-VPMSTYGWNIVKLMSGKDVFYL-------PPEKCDTLL 149 (267)
T ss_dssp CCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCC-CCCCCTTTTSEEEECSCCGGGC-------CCCCCSEEE
T ss_pred CCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCc-chhhhcCcCceEEEeccceeec-------CCccccEEE
Confidence 35699999999999999888887777899999986432100 0012346677999999 98655 356799998
Q ss_pred EeCCCCCCCCcc-hhhhhhHHHHHHHHHhhccCCeEEEEEe
Q 014711 309 IQCPNPDFNRPE-HRWRMVQRSLVEAVSDLLVHDGKVFLQS 348 (420)
Q Consensus 309 ~~fpdp~~k~~~-~k~Rl~~~~~l~~i~~~LkpgG~l~~~t 348 (420)
+.--..- ..+. ...|-+ ..|+.+.++|++ |.|++..
T Consensus 150 cDIgeSs-~~~~vE~~Rtl--rvLela~~wL~~-~~fc~KV 186 (267)
T 3p8z_A 150 CDIGESS-PSPTVEESRTI--RVLKMVEPWLKN-NQFCIKV 186 (267)
T ss_dssp ECCCCCC-SCHHHHHHHHH--HHHHHHGGGCSS-CEEEEEE
T ss_pred EecCCCC-CChhhhhhHHH--HHHHHHHHhccc-CCEEEEE
Confidence 7531111 1110 111222 478888999999 7888875
No 310
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.12 E-value=0.0014 Score=63.98 Aligned_cols=76 Identities=12% Similarity=0.101 Sum_probs=60.5
Q ss_pred CCCEEEEEcCCccHHHHHHHHh-CCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccC--CCeEeE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARK-RKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASY--PGKLIL 306 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~-~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~--~~~~d~ 306 (420)
++.++||..||.|..+..++++ .|+.+++|+|.++.+++.|+ ++ .-.++++++++..++ ..++... .+++|.
T Consensus 57 pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL---~~~Rv~lv~~nF~~l-~~~L~~~g~~~~vDg 131 (347)
T 3tka_A 57 PDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI---DDPRFSIIHGPFSAL-GEYVAERDLIGKIDG 131 (347)
T ss_dssp TTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC---CCTTEEEEESCGGGH-HHHHHHTTCTTCEEE
T ss_pred CCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh---cCCcEEEEeCCHHHH-HHHHHhcCCCCcccE
Confidence 4789999999999999999988 58899999999999999884 43 236899999999887 3333211 236999
Q ss_pred EEEe
Q 014711 307 VSIQ 310 (420)
Q Consensus 307 i~~~ 310 (420)
|++.
T Consensus 132 ILfD 135 (347)
T 3tka_A 132 ILLD 135 (347)
T ss_dssp EEEE
T ss_pred EEEC
Confidence 9765
No 311
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=97.06 E-value=0.0032 Score=67.26 Aligned_cols=130 Identities=14% Similarity=0.082 Sum_probs=86.1
Q ss_pred CCEEEEEcCCccHHHHHHHHh-------CCC-----CeEEEEeC---ChHHHHHHHHH-----------hHHh-----C-
Q 014711 231 QPLVVDIGSGNGLFLLGMARK-------RKD-----LNFLGLEV---NGKLVTHCRDS-----------LQLS-----G- 278 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~-------~P~-----~~viGiDi---s~~~i~~A~~~-----------~~~~-----~- 278 (420)
..+|+|+|+|+|...+...+. +|+ .+|+++|. +.+.+..+.+. ...+ +
T Consensus 67 ~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 146 (676)
T 3ps9_A 67 LFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGC 146 (676)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEE
T ss_pred ceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCc
Confidence 468999999999987766443 233 46999999 77777644331 1111 1
Q ss_pred --------CCcEEEEEcChhhhhhhhhccCCCeEeEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCc
Q 014711 279 --------ITNGYFIATNATSTFRSIVASYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI 350 (420)
Q Consensus 279 --------l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~ 350 (420)
--.+++..+|+.+.++.+-......+|.+|+ |+....+.+ .+-+.+++..++++++|||++.-.+-.
T Consensus 147 ~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~---D~f~p~~np--~~w~~~~~~~l~~~~~~g~~~~t~~~~ 221 (676)
T 3ps9_A 147 HRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFL---DGFAPAKNP--DMWTQNLFNAMARLARPGGTLATFTSA 221 (676)
T ss_dssp EEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEE---CCSCGGGCG--GGSCHHHHHHHHHHEEEEEEEEESCCC
T ss_pred eEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEE---CCCCCcCCh--hhhhHHHHHHHHHHhCCCCEEEeccCc
Confidence 1236788899998876431112467999987 443111111 244579999999999999998865533
Q ss_pred HHHHHHHHHHHHHcCCcee
Q 014711 351 EEVMLRMKQQFLEYGKGKL 369 (420)
Q Consensus 351 ~~~~~~~~~~l~~~g~~~~ 369 (420)
..+++.+.+.|+...
T Consensus 222 ----~~vr~~L~~aGf~v~ 236 (676)
T 3ps9_A 222 ----GFVRRGLQDAGFTMQ 236 (676)
T ss_dssp ----HHHHHHHHHHTCEEE
T ss_pred ----HHHHHHHHhCCeEEE
Confidence 357778888888654
No 312
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=96.90 E-value=0.0016 Score=60.98 Aligned_cols=104 Identities=16% Similarity=0.136 Sum_probs=62.2
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHH--hCCCcEEEEEc-ChhhhhhhhhccCCCeEeE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQL--SGITNGYFIAT-NATSTFRSIVASYPGKLIL 306 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~--~~l~nv~~~~~-Da~~~~~~~~~~~~~~~d~ 306 (420)
.+..|||+||+.|.++...++..+-..+.|.++..+. . . .-... .|..=++|.++ |..++ .+..+|.
T Consensus 73 pg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~-~-~P~~~~~~Gv~~i~~~~G~Df~~~-------~~~~~Dv 142 (269)
T 2px2_A 73 PIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-H-E-EPMLMQSYGWNIVTMKSGVDVFYK-------PSEISDT 142 (269)
T ss_dssp CCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-S-C-CCCCCCSTTGGGEEEECSCCGGGS-------CCCCCSE
T ss_pred CCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-c-c-CCCcccCCCceEEEeeccCCccCC-------CCCCCCE
Confidence 4789999999999999998886222233444444331 0 0 00000 12112466667 98774 3567999
Q ss_pred EEEeCCCCCCCCcchhh---hhhHHHHHHHHHhhccCCe-EEEEEe
Q 014711 307 VSIQCPNPDFNRPEHRW---RMVQRSLVEAVSDLLVHDG-KVFLQS 348 (420)
Q Consensus 307 i~~~fpdp~~k~~~~k~---Rl~~~~~l~~i~~~LkpgG-~l~~~t 348 (420)
|.+.. -|...++.. |.+. .|+.+.++|+||| .|++..
T Consensus 143 VLSDM---APnSG~~~vD~~Rs~~--aL~~A~~~Lk~gG~~FvvKV 183 (269)
T 2px2_A 143 LLCDI---GESSPSAEIEEQRTLR--ILEMVSDWLSRGPKEFCIKI 183 (269)
T ss_dssp EEECC---CCCCSCHHHHHHHHHH--HHHHHHHHHTTCCSEEEEEE
T ss_pred EEeCC---CCCCCccHHHHHHHHH--HHHHHHHHhhcCCcEEEEEE
Confidence 97742 222332211 2222 6777889999999 898886
No 313
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=96.77 E-value=0.0079 Score=59.45 Aligned_cols=68 Identities=9% Similarity=0.103 Sum_probs=52.5
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
++.++||+||.+|.++..++++ ...|+|||+.+-. . .+ ....+|.++++|+..+.+ ....+|.|++
T Consensus 211 ~G~~vlDLGAaPGGWT~~l~~r--g~~V~aVD~~~l~-~----~l--~~~~~V~~~~~d~~~~~~-----~~~~~D~vvs 276 (375)
T 4auk_A 211 NGMWAVDLGACPGGWTYQLVKR--NMWVYSVDNGPMA-Q----SL--MDTGQVTWLREDGFKFRP-----TRSNISWMVC 276 (375)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT--TCEEEEECSSCCC-H----HH--HTTTCEEEECSCTTTCCC-----CSSCEEEEEE
T ss_pred CCCEEEEeCcCCCHHHHHHHHC--CCEEEEEEhhhcC-h----hh--ccCCCeEEEeCccccccC-----CCCCcCEEEE
Confidence 4789999999999999999988 6899999987421 1 11 234689999999987621 3567999987
Q ss_pred eC
Q 014711 310 QC 311 (420)
Q Consensus 310 ~f 311 (420)
..
T Consensus 277 Dm 278 (375)
T 4auk_A 277 DM 278 (375)
T ss_dssp CC
T ss_pred cC
Confidence 53
No 314
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=96.72 E-value=0.0027 Score=62.59 Aligned_cols=59 Identities=14% Similarity=0.018 Sum_probs=51.0
Q ss_pred CCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhh
Q 014711 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATST 292 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~ 292 (420)
+..|||||.|.|.+|..|++.....+++++|+++..+...++.. . ..|++++++|+.++
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~--~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-E--GSPLQILKRDPYDW 117 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-T--TSSCEEECSCTTCH
T ss_pred CCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-c--CCCEEEEECCccch
Confidence 57899999999999999998744467999999999998888776 2 46899999999776
No 315
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=96.57 E-value=0.0027 Score=59.73 Aligned_cols=47 Identities=23% Similarity=0.299 Sum_probs=41.3
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhC
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSG 278 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~ 278 (420)
++.+|||..||+|..+++..+. +.+++|+|+++.+++.|++++...+
T Consensus 212 ~~~~vlD~f~GsGtt~~~a~~~--gr~~ig~e~~~~~~~~~~~r~~~~~ 258 (260)
T 1g60_A 212 PNDLVLDCFMGSGTTAIVAKKL--GRNFIGCDMNAEYVNQANFVLNQLE 258 (260)
T ss_dssp TTCEEEESSCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHC--
T ss_pred CCCEEEECCCCCCHHHHHHHHc--CCeEEEEeCCHHHHHHHHHHHHhcc
Confidence 5789999999999999998877 6899999999999999999987544
No 316
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=96.41 E-value=0.01 Score=56.43 Aligned_cols=123 Identities=14% Similarity=0.133 Sum_probs=87.7
Q ss_pred CCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEEe
Q 014711 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQ 310 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~~ 310 (420)
+..+||+=+|||.+++++.+. ..+++.+|.++..++..++|+.. ..++++++.|+...+....+ +...+|.|++
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS~--~d~~vfvE~~~~a~~~L~~Nl~~--~~~~~V~~~D~~~~L~~l~~-~~~~fdLVfi- 165 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLRS--QDRLYLCELHPTEYNFLLKLPHF--NKKVYVNHTDGVSKLNALLP-PPEKRGLIFI- 165 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSCT--TSEEEEECCSHHHHHHHTTSCCT--TSCEEEECSCHHHHHHHHCS-CTTSCEEEEE-
T ss_pred CCCceeEeCCcHHHHHHHcCC--CCeEEEEeCCHHHHHHHHHHhCc--CCcEEEEeCcHHHHHHHhcC-CCCCccEEEE-
Confidence 455899999999999998873 57999999999999999988864 35799999999887654443 3456999977
Q ss_pred CCCCCCCCcchhhhhhHHHHHHHHHh--hccCCeEEEEEeC--cHHHHHHHHHHHHHcCC
Q 014711 311 CPNPDFNRPEHRWRMVQRSLVEAVSD--LLVHDGKVFLQSD--IEEVMLRMKQQFLEYGK 366 (420)
Q Consensus 311 fpdp~~k~~~~k~Rl~~~~~l~~i~~--~LkpgG~l~~~td--~~~~~~~~~~~l~~~g~ 366 (420)
||-..... ...+.++.+.+ .+.|+|.+.+--. .....+.+.+.+++.+.
T Consensus 166 --DPPYe~k~-----~~~~vl~~L~~~~~r~~~Gi~v~WYPi~~~~~~~~~~~~l~~~~~ 218 (283)
T 2oo3_A 166 --DPSYERKE-----EYKEIPYAIKNAYSKFSTGLYCVWYPVVNKAWTEQFLRKMREISS 218 (283)
T ss_dssp --CCCCCSTT-----HHHHHHHHHHHHHHHCTTSEEEEEEEESSHHHHHHHHHHHHHHCS
T ss_pred --CCCCCCCc-----HHHHHHHHHHHhCccCCCeEEEEEEeccchHHHHHHHHHHHhcCC
Confidence 56333211 11244544444 5679999988632 23335567777776665
No 317
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=96.30 E-value=0.013 Score=55.11 Aligned_cols=106 Identities=12% Similarity=0.151 Sum_probs=72.4
Q ss_pred CCEEEEEcCCccHHHHHHHHh-------CCCCeEEEEeCC-----h----------------------HHHHHHH---HH
Q 014711 231 QPLVVDIGSGNGLFLLGMARK-------RKDLNFLGLEVN-----G----------------------KLVTHCR---DS 273 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~-------~P~~~viGiDis-----~----------------------~~i~~A~---~~ 273 (420)
...++|+||-.|..+..+|+. +++.+++|+|.- + +.++... ++
T Consensus 70 pG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~ 149 (257)
T 3tos_A 70 PGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHEC 149 (257)
T ss_dssp CSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHT
T ss_pred CCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhh
Confidence 467999999999999987753 478999999921 1 1122111 11
Q ss_pred hHHhCC--CcEEEEEcChhhhhhhhhcc-CCCeEeEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEE
Q 014711 274 LQLSGI--TNGYFIATNATSTFRSIVAS-YPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFL 346 (420)
Q Consensus 274 ~~~~~l--~nv~~~~~Da~~~~~~~~~~-~~~~~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~ 346 (420)
....+. +|+.++.+++.+.++.++.. +...+|.+++-. |- .. -....++.+...|+|||.+++
T Consensus 150 ~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~-D~-----Y~----~t~~~le~~~p~l~~GGvIv~ 215 (257)
T 3tos_A 150 SDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDL-DL-----YE----PTKAVLEAIRPYLTKGSIVAF 215 (257)
T ss_dssp TSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECC-CC-----HH----HHHHHHHHHGGGEEEEEEEEE
T ss_pred hhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcC-cc-----cc----hHHHHHHHHHHHhCCCcEEEE
Confidence 122343 68999999999987765432 345799998853 21 00 113678889999999999998
No 318
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=96.19 E-value=0.021 Score=55.94 Aligned_cols=129 Identities=10% Similarity=0.036 Sum_probs=79.8
Q ss_pred CEEEEEcCCccHHHHHHHHhCC-CCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEEe
Q 014711 232 PLVVDIGSGNGLFLLGMARKRK-DLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQ 310 (420)
Q Consensus 232 ~~vLDIGcG~G~~~~~lA~~~P-~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~~ 310 (420)
.+++|+.||.|.+.+.+.+..- -..++++|+++.+++..+.|.. +..++++|+.++....++ ...+|.++..
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~-----~~~~~~~Di~~~~~~~~~--~~~~D~l~~g 75 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFP-----HTQLLAKTIEGITLEEFD--RLSFDMILMS 75 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT-----TSCEECSCGGGCCHHHHH--HHCCSEEEEC
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhcc-----ccccccCCHHHccHhHcC--cCCcCEEEEc
Confidence 5799999999999999988732 1369999999999999988753 345788999887433231 2258999887
Q ss_pred CC-CCCCCCcchh-----h-hhhHHHHHHHHHhhcc--CCeEEEEE-eC---cHHHHHHHHHHHHHcCCceeE
Q 014711 311 CP-NPDFNRPEHR-----W-RMVQRSLVEAVSDLLV--HDGKVFLQ-SD---IEEVMLRMKQQFLEYGKGKLV 370 (420)
Q Consensus 311 fp-dp~~k~~~~k-----~-Rl~~~~~l~~i~~~Lk--pgG~l~~~-td---~~~~~~~~~~~l~~~g~~~~~ 370 (420)
+| .++......+ | .++ .++++ +.+.++ |-- |+++ .. ....++.+++.|++.|+...+
T Consensus 76 pPCq~fS~ag~~~g~~d~r~~l~-~~~~~-~i~~~~~~P~~-~~~ENV~~l~~~~~~~~i~~~l~~~GY~v~~ 145 (343)
T 1g55_A 76 PPCQPFTRIGRQGDMTDSRTNSF-LHILD-ILPRLQKLPKY-ILLENVKGFEVSSTRDLLIQTIENCGFQYQE 145 (343)
T ss_dssp CC------------------CHH-HHHHH-HGGGCSSCCSE-EEEEEETTGGGSHHHHHHHHHHHHTTEEEEE
T ss_pred CCCcchhhcCCcCCccCccchHH-HHHHH-HHHHhcCCCCE-EEEeCCccccCHHHHHHHHHHHHHCCCeeEE
Confidence 65 2222211111 1 121 23433 444566 654 4443 11 124567788899998876543
No 319
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=96.14 E-value=0.024 Score=54.02 Aligned_cols=100 Identities=11% Similarity=0.095 Sum_probs=66.7
Q ss_pred CCCCEEEEEcC------CccHHHHHHHHhCCC-CeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCC
Q 014711 229 PAQPLVVDIGS------GNGLFLLGMARKRKD-LNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYP 301 (420)
Q Consensus 229 ~~~~~vLDIGc------G~G~~~~~lA~~~P~-~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~ 301 (420)
|.+.+|||+|+ -.|.+ .+.+..|+ ..++++|+.+-.. ..+ .++++|..... ..
T Consensus 108 p~gmrVLDLGA~s~kg~APGS~--VLr~~~p~g~~VVavDL~~~~s-----------da~-~~IqGD~~~~~------~~ 167 (344)
T 3r24_A 108 PYNMRVIHFGAGSDKGVAPGTA--VLRQWLPTGTLLVDSDLNDFVS-----------DAD-STLIGDCATVH------TA 167 (344)
T ss_dssp CTTCEEEEESCCCTTSBCHHHH--HHHHHSCTTCEEEEEESSCCBC-----------SSS-EEEESCGGGEE------ES
T ss_pred cCCCEEEeCCCCCCCCCCCcHH--HHHHhCCCCcEEEEeeCccccc-----------CCC-eEEEccccccc------cC
Confidence 45889999995 66773 44555787 6999999997421 123 55999976541 25
Q ss_pred CeEeEEEEeCCCCCCCCcchhh-hh--hHHHHHHHHHhhccCCeEEEEEe
Q 014711 302 GKLILVSIQCPNPDFNRPEHRW-RM--VQRSLVEAVSDLLVHDGKVFLQS 348 (420)
Q Consensus 302 ~~~d~i~~~fpdp~~k~~~~k~-Rl--~~~~~l~~i~~~LkpgG~l~~~t 348 (420)
..+|.|..-..++-.......+ |. +-+..++-+.+.|+|||.|++..
T Consensus 168 ~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKV 217 (344)
T 3r24_A 168 NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKI 217 (344)
T ss_dssp SCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEE
Confidence 7899998754333222211111 11 23567788899999999999985
No 320
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=95.94 E-value=0.076 Score=52.67 Aligned_cols=127 Identities=12% Similarity=0.034 Sum_probs=81.0
Q ss_pred CEEEEEcCCccHHHHHHHHhCCCC-eEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhc---cCCCeEeEE
Q 014711 232 PLVVDIGSGNGLFLLGMARKRKDL-NFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVA---SYPGKLILV 307 (420)
Q Consensus 232 ~~vLDIGcG~G~~~~~lA~~~P~~-~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~---~~~~~~d~i 307 (420)
..++|+-||.|.+...+.+. +. .+.++|+++.+++..+.|. ++..++++|+.++....+. .....+|.|
T Consensus 3 ~~vidLFsG~GGlslG~~~a--G~~~v~avE~d~~a~~t~~~N~-----~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i 75 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA--GFDVKMAVEIDQHAINTHAINF-----PRSLHVQEDVSLLNAEIIKGFFKNDMPIDGI 75 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH--TCEEEEEECSCHHHHHHHHHHC-----TTSEEECCCGGGCCHHHHHHHHCSCCCCCEE
T ss_pred CeEEEEccCcCHHHHHHHHC--CCcEEEEEeCCHHHHHHHHHhC-----CCCceEecChhhcCHHHHHhhcccCCCeeEE
Confidence 46899999999999999887 34 4679999999998887764 4567889999886432220 024579999
Q ss_pred EEeCCC-CCCCCc-----chhhhhhHHHHHHHHHhhccCCeEEE------EEeCcHHHHHHHHHHHHHcCCce
Q 014711 308 SIQCPN-PDFNRP-----EHRWRMVQRSLVEAVSDLLVHDGKVF------LQSDIEEVMLRMKQQFLEYGKGK 368 (420)
Q Consensus 308 ~~~fpd-p~~k~~-----~~k~Rl~~~~~l~~i~~~LkpgG~l~------~~td~~~~~~~~~~~l~~~g~~~ 368 (420)
+..+|= ++.... +.+..++ ..+++ +.+.++|.-.++ +..+...+++.++ .|++.|+..
T Consensus 76 ~ggpPCQ~fS~ag~~~~~d~r~~L~-~~~~~-~v~~~~P~~~v~ENV~gl~s~~~~~~~~~i~-~l~~~GY~v 145 (376)
T 3g7u_A 76 IGGPPCQGFSSIGKGNPDDSRNQLY-MHFYR-LVSELQPLFFLAENVPGIMQEKYSGIRNKAF-NLVSGDYDI 145 (376)
T ss_dssp EECCCCCTTC-------CHHHHHHH-HHHHH-HHHHHCCSEEEEEECTTTTCGGGHHHHHHHH-HHHHTTEEE
T ss_pred EecCCCCCcccccCCCCCCchHHHH-HHHHH-HHHHhCCCEEEEecchHhhccCcHHHHHHHH-HHHcCCCcc
Confidence 887552 222111 1111222 34444 344568865443 1123455677788 899888765
No 321
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.86 E-value=0.027 Score=53.82 Aligned_cols=86 Identities=14% Similarity=0.119 Sum_probs=56.4
Q ss_pred CCcEEEEEcChhhhhhhhhccCCCeEeEEEEeCCCCCCCCcchh------h---h---hh--HHHHHHHHHhhccCCeEE
Q 014711 279 ITNGYFIATNATSTFRSIVASYPGKLILVSIQCPNPDFNRPEHR------W---R---MV--QRSLVEAVSDLLVHDGKV 344 (420)
Q Consensus 279 l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~~fpdp~~k~~~~k------~---R---l~--~~~~l~~i~~~LkpgG~l 344 (420)
+.+++++++|+.+.+.. + ++++||.|+.+ .|+....... . + .+ ..++++++.++|||||.+
T Consensus 19 ~~~~~i~~gD~~~~l~~-l--~~~s~DlIvtd--PPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l 93 (297)
T 2zig_A 19 FGVHRLHVGDAREVLAS-F--PEASVHLVVTS--PPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRL 93 (297)
T ss_dssp --CEEEEESCHHHHHTT-S--CTTCEEEEEEC--CCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEE
T ss_pred ccCCEEEECcHHHHHhh-C--CCCceeEEEEC--CCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEE
Confidence 45789999999987532 3 46899999887 5554321100 0 0 11 135778999999999999
Q ss_pred EEEeCcH-------------HHHHHHHHHHHHcCCcee
Q 014711 345 FLQSDIE-------------EVMLRMKQQFLEYGKGKL 369 (420)
Q Consensus 345 ~~~td~~-------------~~~~~~~~~l~~~g~~~~ 369 (420)
++.+++. .+...+.+.+.+.||...
T Consensus 94 ~i~~~d~~~~~~~~g~~~~~~~~~~l~~~~~~~Gf~~~ 131 (297)
T 2zig_A 94 VIVVGDVAVARRRFGRHLVFPLHADIQVRCRKLGFDNL 131 (297)
T ss_dssp EEEECCEEEECC----EEEECHHHHHHHHHHHTTCEEE
T ss_pred EEEECCCccccccCCcccccccHHHHHHHHHHcCCeee
Confidence 9987632 133457778888887643
No 322
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=95.74 E-value=0.028 Score=56.38 Aligned_cols=61 Identities=15% Similarity=0.121 Sum_probs=51.8
Q ss_pred CCCEEEEEcCCccHHHHHHH-HhCCC-CeEEEEeCChHHHHHHHHHhHH---hCC-CcEEEEEcChh
Q 014711 230 AQPLVVDIGSGNGLFLLGMA-RKRKD-LNFLGLEVNGKLVTHCRDSLQL---SGI-TNGYFIATNAT 290 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA-~~~P~-~~viGiDis~~~i~~A~~~~~~---~~l-~nv~~~~~Da~ 290 (420)
++.+++|||++.|.++..++ +..+. .+|+++|.++...+..++++.. ++. +|+++++.-+-
T Consensus 226 ~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al~ 292 (409)
T 2py6_A 226 DSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGAG 292 (409)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEEC
T ss_pred CCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEEE
Confidence 57899999999999999988 56665 7999999999999999999987 346 78888775543
No 323
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=95.47 E-value=0.056 Score=52.36 Aligned_cols=85 Identities=16% Similarity=0.074 Sum_probs=57.0
Q ss_pred CcEEEEEcChhhhhhhhhccCCCeEeEEEEeCCCCCCCCcc--------hhhhhhHHHHHHHHHhhccCCeEEEEEeCcH
Q 014711 280 TNGYFIATNATSTFRSIVASYPGKLILVSIQCPNPDFNRPE--------HRWRMVQRSLVEAVSDLLVHDGKVFLQSDIE 351 (420)
Q Consensus 280 ~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~~fpdp~~k~~~--------~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~ 351 (420)
.+.+++++|+.+.+.. + +++++|+|++. .|+..... ..--..-.+.+.++.++|+|||.+++.+++.
T Consensus 13 ~~~~ii~gD~~~~l~~-l--~~~svDlI~tD--PPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~ 87 (323)
T 1boo_A 13 SNGSMYIGDSLELLES-F--PEESISLVMTS--PPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGA 87 (323)
T ss_dssp SSEEEEESCHHHHGGG-S--CSSCEEEEEEC--CCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred CCceEEeCcHHHHHhh-C--CCCCeeEEEEC--CCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCE
Confidence 4588999999887542 3 47899999885 44432210 0000112478889999999999999987753
Q ss_pred ----------HHHHHHHHHHHHcCCcee
Q 014711 352 ----------EVMLRMKQQFLEYGKGKL 369 (420)
Q Consensus 352 ----------~~~~~~~~~l~~~g~~~~ 369 (420)
.....+.+.++..||...
T Consensus 88 ~~~g~~~~~~~~~~~i~~~~~~~Gf~~~ 115 (323)
T 1boo_A 88 YMKGVPARSIYNFRVLIRMIDEVGFFLA 115 (323)
T ss_dssp EETTEEEECCHHHHHHHHHHHTTCCEEE
T ss_pred ecCCCcccccchHHHHHHHHHhCCCEEE
Confidence 134556677788887543
No 324
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=95.44 E-value=0.21 Score=48.40 Aligned_cols=125 Identities=12% Similarity=0.010 Sum_probs=81.2
Q ss_pred CCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEEe
Q 014711 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQ 310 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~~ 310 (420)
...++|+.||.|.+...+.+.. -..+.++|+++.+++..+.|.... . ++|+.++....+ ..+|.++..
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG-~~~v~~~e~d~~a~~t~~~N~~~~-----~--~~Di~~~~~~~~----~~~D~l~~g 78 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCG-AECVYSNEWDKYAQEVYEMNFGEK-----P--EGDITQVNEKTI----PDHDILCAG 78 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTT-CEEEEEECCCHHHHHHHHHHHSCC-----C--BSCGGGSCGGGS----CCCSEEEEE
T ss_pred CCcEEEECCCcCHHHHHHHHCC-CeEEEEEeCCHHHHHHHHHHcCCC-----C--cCCHHHcCHhhC----CCCCEEEEC
Confidence 4789999999999999988762 235888999999999888876321 1 688888743323 248999888
Q ss_pred CCCC-CCCCcc------hhhhhhHHHHHHHHHhhccCCeEEEEEe-------CcHHHHHHHHHHHHHcCCceeE
Q 014711 311 CPNP-DFNRPE------HRWRMVQRSLVEAVSDLLVHDGKVFLQS-------DIEEVMLRMKQQFLEYGKGKLV 370 (420)
Q Consensus 311 fpdp-~~k~~~------~k~Rl~~~~~l~~i~~~LkpgG~l~~~t-------d~~~~~~~~~~~l~~~g~~~~~ 370 (420)
+|=. +..... .+..|+ .++++.+ +.++|. .|+++- +....++.+++.|++.|+...+
T Consensus 79 pPCQ~fS~ag~~~g~~d~r~~L~-~~~~r~i-~~~~P~-~~~~ENV~gl~~~~~~~~~~~i~~~l~~~GY~v~~ 149 (327)
T 2c7p_A 79 FPCQAFSISGKQKGFEDSRGTLF-FDIARIV-REKKPK-VVFMENVKNFASHDNGNTLEVVKNTMNELDYSFHA 149 (327)
T ss_dssp CCCTTTCTTSCCCGGGSTTSCHH-HHHHHHH-HHHCCS-EEEEEEEGGGGTGGGGHHHHHHHHHHHHTTBCCEE
T ss_pred CCCCCcchhcccCCCcchhhHHH-HHHHHHH-HhccCc-EEEEeCcHHHHhccccHHHHHHHHHHHhCCCEEEE
Confidence 6532 222111 111232 3555544 456885 445541 2234577888999999876543
No 325
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=94.57 E-value=0.13 Score=48.07 Aligned_cols=81 Identities=15% Similarity=0.065 Sum_probs=52.4
Q ss_pred EEEEEcChhhhhhhhhccCCCeEeEEEEeCCCCCCCC-cchh-----h--hhhHHHHHHHHHhhccCCeEEEEEeCcHHH
Q 014711 282 GYFIATNATSTFRSIVASYPGKLILVSIQCPNPDFNR-PEHR-----W--RMVQRSLVEAVSDLLVHDGKVFLQSDIEEV 353 (420)
Q Consensus 282 v~~~~~Da~~~~~~~~~~~~~~~d~i~~~fpdp~~k~-~~~k-----~--Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~ 353 (420)
.+++++|+.+.+.. + +++++|.|++. .|+... .... . .-.....++++.++|+|||.+++.++...
T Consensus 5 ~~l~~gD~~~~l~~-l--~~~~vdlI~~D--PPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~~d~~- 78 (260)
T 1g60_A 5 NKIHQMNCFDFLDQ-V--ENKSVQLAVID--PPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFNTPFN- 78 (260)
T ss_dssp SSEEECCHHHHHHH-S--CTTCEEEEEEC--CCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEECHHH-
T ss_pred CeEEechHHHHHHh-c--cccccCEEEEC--CCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEcCcHH-
Confidence 36789999887653 3 46799999885 444332 1100 0 01224778889999999999999865433
Q ss_pred HHHHHHHHHHcCCce
Q 014711 354 MLRMKQQFLEYGKGK 368 (420)
Q Consensus 354 ~~~~~~~l~~~g~~~ 368 (420)
...+...+.+.+|..
T Consensus 79 ~~~~~~~~~~~gf~~ 93 (260)
T 1g60_A 79 CAFICQYLVSKGMIF 93 (260)
T ss_dssp HHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHhhccce
Confidence 234555677777754
No 326
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.37 E-value=0.35 Score=40.27 Aligned_cols=111 Identities=14% Similarity=0.129 Sum_probs=69.8
Q ss_pred CEEEEEcCCccHHHHHHHHh--CCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhc-cCCCeEeEEE
Q 014711 232 PLVVDIGSGNGLFLLGMARK--RKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVA-SYPGKLILVS 308 (420)
Q Consensus 232 ~~vLDIGcG~G~~~~~lA~~--~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~-~~~~~~d~i~ 308 (420)
..++=+|||. ++..+|+. .-+..|+++|.+++.++.+++ . ++.++.+|+.+. +.+. ..-...|.++
T Consensus 8 ~~viIiG~G~--~G~~la~~L~~~g~~v~vid~~~~~~~~~~~----~---g~~~i~gd~~~~--~~l~~a~i~~ad~vi 76 (140)
T 3fwz_A 8 NHALLVGYGR--VGSLLGEKLLASDIPLVVIETSRTRVDELRE----R---GVRAVLGNAANE--EIMQLAHLECAKWLI 76 (140)
T ss_dssp SCEEEECCSH--HHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T---TCEEEESCTTSH--HHHHHTTGGGCSEEE
T ss_pred CCEEEECcCH--HHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----c---CCCEEECCCCCH--HHHHhcCcccCCEEE
Confidence 4577788754 44444443 236799999999998876653 2 357788998764 1111 0124678888
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHHHHHHHHHHHHcCCce
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGK 368 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~~~~~~~~l~~~g~~~ 368 (420)
+..|++. . ...+-...+.+.|+..++.....+.+. +.|++.|...
T Consensus 77 ~~~~~~~----------~-n~~~~~~a~~~~~~~~iiar~~~~~~~----~~l~~~G~d~ 121 (140)
T 3fwz_A 77 LTIPNGY----------E-AGEIVASARAKNPDIEIIARAHYDDEV----AYITERGANQ 121 (140)
T ss_dssp ECCSCHH----------H-HHHHHHHHHHHCSSSEEEEEESSHHHH----HHHHHTTCSE
T ss_pred EECCChH----------H-HHHHHHHHHHHCCCCeEEEEECCHHHH----HHHHHCCCCE
Confidence 7655542 1 123445667788999998888776653 4566677653
No 327
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=94.16 E-value=0.38 Score=46.65 Aligned_cols=130 Identities=12% Similarity=0.052 Sum_probs=80.0
Q ss_pred CCEEEEEcCCccHHHHHHHHhC-CCCeE-EEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 231 QPLVVDIGSGNGLFLLGMARKR-KDLNF-LGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~~-P~~~v-iGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
..+++|+-||.|.+...+.+.. +-..+ .++|+++.+++.-+.|... . ++++|+.++..+.++ ...+|.++
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~-----~-~~~~DI~~~~~~~i~--~~~~Dil~ 81 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKE-----E-VQVKNLDSISIKQIE--SLNCNTWF 81 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCC-----C-CBCCCTTTCCHHHHH--HTCCCEEE
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCC-----C-cccCChhhcCHHHhc--cCCCCEEE
Confidence 4689999999999999998773 22345 7999999999888877531 1 567888877443332 23689998
Q ss_pred EeCCCCCC------CCc---chhhhhhHHHHHHHHHhhc--cCCeEEEEEe----CcHHHHHHHHHHHHHcCCceeE
Q 014711 309 IQCPNPDF------NRP---EHRWRMVQRSLVEAVSDLL--VHDGKVFLQS----DIEEVMLRMKQQFLEYGKGKLV 370 (420)
Q Consensus 309 ~~fpdp~~------k~~---~~k~Rl~~~~~l~~i~~~L--kpgG~l~~~t----d~~~~~~~~~~~l~~~g~~~~~ 370 (420)
..+|=.-+ +.+ +.+..++ .++++.+.+.+ +|- .|+++- -....++.+++.|++.|+...+
T Consensus 82 ggpPCQ~fs~S~ag~~~~~~d~r~~L~-~~~~r~~i~~~~~~P~-~~~lENV~gl~~~~~~~~i~~~l~~~GY~v~~ 156 (327)
T 3qv2_A 82 MSPPCQPYNNSIMSKHKDINDPRAKSV-LHLYRDILPYLINKPK-HIFIENVPLFKESLVFKEIYNILIKNQYYIKD 156 (327)
T ss_dssp ECCCCTTCSHHHHTTTCTTTCGGGHHH-HHHHHTTGGGCSSCCS-EEEEEECGGGGGSHHHHHHHHHHHHTTCEEEE
T ss_pred ecCCccCcccccCCCCCCCccccchhH-HHHHHHHHHHhccCCC-EEEEEchhhhcChHHHHHHHHHHHhCCCEEEE
Confidence 87653323 111 1111221 13333233345 564 444542 0123567788899999886543
No 328
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=93.54 E-value=0.22 Score=48.71 Aligned_cols=96 Identities=16% Similarity=0.170 Sum_probs=64.1
Q ss_pred CCCEEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEE--cChhhhhhhhhccCCCeEeE
Q 014711 230 AQPLVVDIGSGN-GLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIA--TNATSTFRSIVASYPGKLIL 306 (420)
Q Consensus 230 ~~~~vLDIGcG~-G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~--~Da~~~~~~~~~~~~~~~d~ 306 (420)
.+..||-+|||. |..++.+|+..-...|+++|.+++.++.+++ .|...+ +-. .|..+.+.+. ..+.+|.
T Consensus 190 ~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~~v-i~~~~~~~~~~~~~~---~~gg~D~ 261 (371)
T 1f8f_A 190 PASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQ----LGATHV-INSKTQDPVAAIKEI---TDGGVNF 261 (371)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHH----HTCSEE-EETTTSCHHHHHHHH---TTSCEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH----cCCCEE-ecCCccCHHHHHHHh---cCCCCcE
Confidence 467899999987 8889999988633379999999998887754 344321 111 1222221222 1336898
Q ss_pred EEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 307 VSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 307 i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
++-.-.. +..++...+.|+++|++.+.
T Consensus 262 vid~~g~--------------~~~~~~~~~~l~~~G~iv~~ 288 (371)
T 1f8f_A 262 ALESTGS--------------PEILKQGVDALGILGKIAVV 288 (371)
T ss_dssp EEECSCC--------------HHHHHHHHHTEEEEEEEEEC
T ss_pred EEECCCC--------------HHHHHHHHHHHhcCCEEEEe
Confidence 8654221 25778889999999999874
No 329
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=93.38 E-value=0.41 Score=46.52 Aligned_cols=98 Identities=12% Similarity=0.108 Sum_probs=63.6
Q ss_pred CCCEEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcC---hhhhhhhhhccCCCeEe
Q 014711 230 AQPLVVDIGSGN-GLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATN---ATSTFRSIVASYPGKLI 305 (420)
Q Consensus 230 ~~~~vLDIGcG~-G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~D---a~~~~~~~~~~~~~~~d 305 (420)
.+..||-+|+|. |..++.+|+.....+|+++|.+++.++.+++ .|... .+..+ ..+............+|
T Consensus 171 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~~--vi~~~~~~~~~~~~~i~~~~~~g~D 244 (356)
T 1pl8_A 171 LGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE----IGADL--VLQISKESPQEIARKVEGQLGCKPE 244 (356)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTCSE--EEECSSCCHHHHHHHHHHHHTSCCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----hCCCE--EEcCcccccchHHHHHHHHhCCCCC
Confidence 467899999986 8888999988643389999999988877653 45442 22222 12221111100124688
Q ss_pred EEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 306 LVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 306 ~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
.++-.-.. +..+....+.|+|+|++.+.
T Consensus 245 ~vid~~g~--------------~~~~~~~~~~l~~~G~iv~~ 272 (356)
T 1pl8_A 245 VTIECTGA--------------EASIQAGIYATRSGGTLVLV 272 (356)
T ss_dssp EEEECSCC--------------HHHHHHHHHHSCTTCEEEEC
T ss_pred EEEECCCC--------------hHHHHHHHHHhcCCCEEEEE
Confidence 88654221 25678888999999999874
No 330
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=93.29 E-value=0.35 Score=46.71 Aligned_cols=98 Identities=14% Similarity=0.199 Sum_probs=66.0
Q ss_pred CCCEEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGN-GLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~-G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
.+..||=+|+|. |..++.+|+.....+|+++|.+++.++.+++ .|...+--...|..+.+.+.. ....+|.++
T Consensus 171 ~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~----lGa~~~i~~~~~~~~~v~~~t--~g~g~d~v~ 244 (345)
T 3jv7_A 171 PGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALARE----VGADAAVKSGAGAADAIRELT--GGQGATAVF 244 (345)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHH----TTCSEEEECSTTHHHHHHHHH--GGGCEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----cCCCEEEcCCCcHHHHHHHHh--CCCCCeEEE
Confidence 467888899976 8888999988767899999999998887754 454432111112222212221 133688886
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
-.-.. +..++...+.|+++|++.+.
T Consensus 245 d~~G~--------------~~~~~~~~~~l~~~G~iv~~ 269 (345)
T 3jv7_A 245 DFVGA--------------QSTIDTAQQVVAVDGHISVV 269 (345)
T ss_dssp ESSCC--------------HHHHHHHHHHEEEEEEEEEC
T ss_pred ECCCC--------------HHHHHHHHHHHhcCCEEEEE
Confidence 54222 25788899999999999874
No 331
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=92.78 E-value=0.29 Score=48.45 Aligned_cols=108 Identities=13% Similarity=0.052 Sum_probs=64.9
Q ss_pred CCCEEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEE---cCh-hhhhhhhhccCCCeE
Q 014711 230 AQPLVVDIGSGN-GLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIA---TNA-TSTFRSIVASYPGKL 304 (420)
Q Consensus 230 ~~~~vLDIGcG~-G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~---~Da-~~~~~~~~~~~~~~~ 304 (420)
.+..||-+|||. |.+++.+|+..-..+|+++|.+++.++.+++ .|. . .+. .|. .+.+.+.. ....+
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa-~--~i~~~~~~~~~~~~~~~~--~g~g~ 255 (398)
T 2dph_A 185 PGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSD----AGF-E--TIDLRNSAPLRDQIDQIL--GKPEV 255 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHT----TTC-E--EEETTSSSCHHHHHHHHH--SSSCE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----cCC-c--EEcCCCcchHHHHHHHHh--CCCCC
Confidence 467899999987 8899999998643389999999998877643 454 2 222 221 22222222 23368
Q ss_pred eEEEEeCCCCCCCC-cchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 305 ILVSIQCPNPDFNR-PEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 305 d~i~~~fpdp~~k~-~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
|.++-.-..+.... .... .+..+..+....+.|+++|++.+.
T Consensus 256 Dvvid~~g~~~~~~~~~~~-~~~~~~~~~~~~~~l~~gG~iv~~ 298 (398)
T 2dph_A 256 DCGVDAVGFEAHGLGDEAN-TETPNGALNSLFDVVRAGGAIGIP 298 (398)
T ss_dssp EEEEECSCTTCBCSGGGTT-SBCTTHHHHHHHHHEEEEEEEECC
T ss_pred CEEEECCCCcccccccccc-ccccHHHHHHHHHHHhcCCEEEEe
Confidence 99865533321000 0000 000014678889999999998753
No 332
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=92.21 E-value=0.13 Score=49.71 Aligned_cols=60 Identities=20% Similarity=0.159 Sum_probs=48.5
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhh
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATST 292 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~ 292 (420)
++.+|||--||+|..+++..+. +.+++|+|+++..++.+++++.+.+.. ...++.|+.++
T Consensus 252 ~~~~VlDpF~GsGtt~~aa~~~--gr~~ig~e~~~~~~~~~~~r~~~~~~~-~~~~~~~~~~i 311 (323)
T 1boo_A 252 PDDLVVDIFGGSNTTGLVAERE--SRKWISFEMKPEYVAASAFRFLDNNIS-EEKITDIYNRI 311 (323)
T ss_dssp TTCEEEETTCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHGGGSCSCSC-HHHHHHHHHHH
T ss_pred CCCEEEECCCCCCHHHHHHHHc--CCCEEEEeCCHHHHHHHHHHHHhcccc-hHHHHHHHHHH
Confidence 5789999999999999887776 689999999999999999998765542 44455555554
No 333
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=92.15 E-value=0.37 Score=46.80 Aligned_cols=129 Identities=11% Similarity=0.058 Sum_probs=80.0
Q ss_pred CEEEEEcCCccHHHHHHHHhCC-CCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEEe
Q 014711 232 PLVVDIGSGNGLFLLGMARKRK-DLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQ 310 (420)
Q Consensus 232 ~~vLDIGcG~G~~~~~lA~~~P-~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~~ 310 (420)
.+++|+-||.|.+...+.+..- -..+.++|+++.+++.-+.|.. +..+++.|+.++....++ ...+|.++..
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~-----~~~~~~~DI~~~~~~~~~--~~~~D~l~gg 76 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFP-----ETNLLNRNIQQLTPQVIK--KWNVDTILMS 76 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT-----TSCEECCCGGGCCHHHHH--HTTCCEEEEC
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCC-----CCceeccccccCCHHHhc--cCCCCEEEec
Confidence 4699999999999999887732 2457899999999888777642 334678899887443332 2358998887
Q ss_pred CCC-CCCCCcc------hhhhhhHHHHHHHHHhhcc-CCeEEEEEe-C---cHHHHHHHHHHHHHcCCceeE
Q 014711 311 CPN-PDFNRPE------HRWRMVQRSLVEAVSDLLV-HDGKVFLQS-D---IEEVMLRMKQQFLEYGKGKLV 370 (420)
Q Consensus 311 fpd-p~~k~~~------~k~Rl~~~~~l~~i~~~Lk-pgG~l~~~t-d---~~~~~~~~~~~l~~~g~~~~~ 370 (420)
+|= |+..... .+..++ .++++ +.+.++ |- .|+++- . ....++.+.+.|++.|+...+
T Consensus 77 pPCQ~fS~ag~~~~~~d~r~~L~-~~~~r-~i~~~~~P~-~~vlENV~gl~~~~~~~~i~~~l~~~GY~v~~ 145 (333)
T 4h0n_A 77 PPCQPFTRNGKYLDDNDPRTNSF-LYLIG-ILDQLDNVD-YILMENVKGFENSTVRNLFIDKLKECNFIYQE 145 (333)
T ss_dssp CCCCCSEETTEECCTTCTTSCCH-HHHHH-HGGGCTTCC-EEEEEECTTGGGSHHHHHHHHHHHHTTEEEEE
T ss_pred CCCcchhhhhhccCCcCcccccH-HHHHH-HHHHhcCCC-EEEEecchhhhhhhHHHHHHHHHHhCCCeEEE
Confidence 652 2211111 111222 24444 334454 74 444542 1 123467788899998876543
No 334
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=91.79 E-value=0.45 Score=46.09 Aligned_cols=96 Identities=13% Similarity=0.056 Sum_probs=63.2
Q ss_pred CCCEEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEE---cChhhhhhhhhccCCCeEe
Q 014711 230 AQPLVVDIGSGN-GLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIA---TNATSTFRSIVASYPGKLI 305 (420)
Q Consensus 230 ~~~~vLDIGcG~-G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~---~Da~~~~~~~~~~~~~~~d 305 (420)
.+..||=+|+|. |..++.+|+..-..+|+++|.+++.++.+++ .|... ++. .|..+.+.+.. ....+|
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa~~--vi~~~~~~~~~~v~~~t--~g~g~D 237 (352)
T 3fpc_A 166 LGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALE----YGATD--IINYKNGDIVEQILKAT--DGKGVD 237 (352)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHH----HTCCE--EECGGGSCHHHHHHHHT--TTCCEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH----hCCce--EEcCCCcCHHHHHHHHc--CCCCCC
Confidence 366788889986 8888888987643489999999988877755 34432 222 22222212221 234699
Q ss_pred EEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 306 LVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 306 ~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
.++-....| ..+....+.|+|+|++.+.
T Consensus 238 ~v~d~~g~~--------------~~~~~~~~~l~~~G~~v~~ 265 (352)
T 3fpc_A 238 KVVIAGGDV--------------HTFAQAVKMIKPGSDIGNV 265 (352)
T ss_dssp EEEECSSCT--------------THHHHHHHHEEEEEEEEEC
T ss_pred EEEECCCCh--------------HHHHHHHHHHhcCCEEEEe
Confidence 987653333 4678888999999998753
No 335
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=91.53 E-value=1 Score=43.43 Aligned_cols=96 Identities=13% Similarity=0.104 Sum_probs=62.4
Q ss_pred CCCEEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEc---ChhhhhhhhhccC---CC
Q 014711 230 AQPLVVDIGSGN-GLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIAT---NATSTFRSIVASY---PG 302 (420)
Q Consensus 230 ~~~~vLDIGcG~-G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~---Da~~~~~~~~~~~---~~ 302 (420)
.+..||-+|+|. |..++.+|+.. ..+|+++|.+++.++.+++ .|...+ +-.. |..+.+.+.. . ..
T Consensus 168 ~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~----lGa~~~-~~~~~~~~~~~~i~~~~--~~~~g~ 239 (352)
T 1e3j_A 168 LGTTVLVIGAGPIGLVSVLAAKAY-GAFVVCTARSPRRLEVAKN----CGADVT-LVVDPAKEEESSIIERI--RSAIGD 239 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHH----TTCSEE-EECCTTTSCHHHHHHHH--HHHSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHH----hCCCEE-EcCcccccHHHHHHHHh--ccccCC
Confidence 467888899876 78888888876 5679999999998877753 454422 2211 2211111111 1 24
Q ss_pred eEeEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 303 KLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 303 ~~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
.+|.++-.-.. +..++...+.|+++|++++.
T Consensus 240 g~D~vid~~g~--------------~~~~~~~~~~l~~~G~iv~~ 270 (352)
T 1e3j_A 240 LPNVTIDCSGN--------------EKCITIGINITRTGGTLMLV 270 (352)
T ss_dssp CCSEEEECSCC--------------HHHHHHHHHHSCTTCEEEEC
T ss_pred CCCEEEECCCC--------------HHHHHHHHHHHhcCCEEEEE
Confidence 58888654221 24678888999999999874
No 336
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=91.41 E-value=0.53 Score=45.39 Aligned_cols=82 Identities=6% Similarity=0.036 Sum_probs=51.8
Q ss_pred EEEE-EcChhhhhhhhhccCCCeEeEEEEeCCCCCCCCc-----chhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHH--
Q 014711 282 GYFI-ATNATSTFRSIVASYPGKLILVSIQCPNPDFNRP-----EHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEV-- 353 (420)
Q Consensus 282 v~~~-~~Da~~~~~~~~~~~~~~~d~i~~~fpdp~~k~~-----~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~-- 353 (420)
.+++ ++|+.+.+.. + +++++|+|++. .|+.... +..---.-...+.++.++|+|||.+++.+|+...
T Consensus 39 ~~l~i~gD~l~~L~~-l--~~~svDlI~tD--PPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~~~~~~~ 113 (319)
T 1eg2_A 39 RHVYDVCDCLDTLAK-L--PDDSVQLIICD--PPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGGLQYQGE 113 (319)
T ss_dssp EEEEEECCHHHHHHT-S--CTTCEEEEEEC--CCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEECSCCCCC
T ss_pred ceEEECCcHHHHHHh-C--ccCCcCEEEEC--CCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcCcccccc
Confidence 6777 9999987643 3 46799999885 4443221 0000001246778889999999999999876422
Q ss_pred -----HHHHHHHHHHcC-Cce
Q 014711 354 -----MLRMKQQFLEYG-KGK 368 (420)
Q Consensus 354 -----~~~~~~~l~~~g-~~~ 368 (420)
...+...+...| +..
T Consensus 114 ~~~~~l~~l~~~i~~~G~~~~ 134 (319)
T 1eg2_A 114 AGSGDLISIISHMRQNSKMLL 134 (319)
T ss_dssp TTBCCHHHHHHHHHHHCCCEE
T ss_pred cccccHHHHHHHHhCccccee
Confidence 134555555555 543
No 337
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=91.37 E-value=0.23 Score=48.00 Aligned_cols=47 Identities=17% Similarity=0.114 Sum_probs=39.8
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCCh---HHHHHHHHHhHHhC
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNG---KLVTHCRDSLQLSG 278 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~---~~i~~A~~~~~~~~ 278 (420)
++.+|||-=||+|..+++..+. +.+++|+|+++ ..++.+++++.+.+
T Consensus 242 ~~~~vlDpF~GsGtt~~aa~~~--~r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 242 PGSTVLDFFAGSGVTARVAIQE--GRNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp TTCEEEETTCTTCHHHHHHHHH--TCEEEEEESSTHHHHHHHHHHHHC----
T ss_pred CCCEEEecCCCCCHHHHHHHHc--CCcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 5789999999999999998877 68999999999 99999999987654
No 338
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=91.08 E-value=1.2 Score=42.95 Aligned_cols=96 Identities=15% Similarity=0.217 Sum_probs=63.2
Q ss_pred CCCEEEEEcCCc-cHHHHHHHHhC-CCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcCh-hhhhhhhhccCCCeEeE
Q 014711 230 AQPLVVDIGSGN-GLFLLGMARKR-KDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNA-TSTFRSIVASYPGKLIL 306 (420)
Q Consensus 230 ~~~~vLDIGcG~-G~~~~~lA~~~-P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da-~~~~~~~~~~~~~~~d~ 306 (420)
.+..||-+|+|. |..++.+|+.. |+.+++++|.|++.++.+++ .|...+ +..+- .+.....- ....+|.
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~----lGa~~v--i~~~~~~~~~~~~~--~g~g~D~ 241 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALE----LGADYV--SEMKDAESLINKLT--DGLGASI 241 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHH----HTCSEE--ECHHHHHHHHHHHH--TTCCEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHH----hCCCEE--eccccchHHHHHhh--cCCCccE
Confidence 367899999975 77888888874 57899999999998877754 354322 11111 11111211 2336898
Q ss_pred EEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 307 VSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 307 i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
++-.-.. +..++...+.|+++|++.+.
T Consensus 242 vid~~g~--------------~~~~~~~~~~l~~~G~iv~~ 268 (344)
T 2h6e_A 242 AIDLVGT--------------EETTYNLGKLLAQEGAIILV 268 (344)
T ss_dssp EEESSCC--------------HHHHHHHHHHEEEEEEEEEC
T ss_pred EEECCCC--------------hHHHHHHHHHhhcCCEEEEe
Confidence 8664222 24778888999999998764
No 339
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=90.98 E-value=0.7 Score=44.41 Aligned_cols=94 Identities=17% Similarity=0.196 Sum_probs=63.3
Q ss_pred CCCEEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEE--cChhhhhhhhhccCCCeEeE
Q 014711 230 AQPLVVDIGSGN-GLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIA--TNATSTFRSIVASYPGKLIL 306 (420)
Q Consensus 230 ~~~~vLDIGcG~-G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~--~Da~~~~~~~~~~~~~~~d~ 306 (420)
.+..||-+|+|. |..++.+|+.. ..+|+++|.+++.++.+++ .|...+ +-. .|..+.+.+ . .+.+|.
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~----lGa~~~-i~~~~~~~~~~~~~-~---~g~~d~ 235 (340)
T 3s2e_A 166 PGQWVVISGIGGLGHVAVQYARAM-GLRVAAVDIDDAKLNLARR----LGAEVA-VNARDTDPAAWLQK-E---IGGAHG 235 (340)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHT-TCEEEEEESCHHHHHHHHH----TTCSEE-EETTTSCHHHHHHH-H---HSSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHH----cCCCEE-EeCCCcCHHHHHHH-h---CCCCCE
Confidence 467788899986 89999999986 5699999999998887654 454321 211 122222111 1 236888
Q ss_pred EEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 307 VSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 307 i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
++..... ...++...+.|+|+|++.+.
T Consensus 236 vid~~g~--------------~~~~~~~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 236 VLVTAVS--------------PKAFSQAIGMVRRGGTIALN 262 (340)
T ss_dssp EEESSCC--------------HHHHHHHHHHEEEEEEEEEC
T ss_pred EEEeCCC--------------HHHHHHHHHHhccCCEEEEe
Confidence 8654222 36788899999999998874
No 340
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=90.87 E-value=2.3 Score=41.19 Aligned_cols=126 Identities=13% Similarity=0.140 Sum_probs=78.8
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhC---------------------CCcEEEEEcC
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSG---------------------ITNGYFIATN 288 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~---------------------l~nv~~~~~D 288 (420)
....|+.+|||.......|...+|+..|+-+|. |+.++.-++.+.+.+ ..+.+++.+|
T Consensus 97 ~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~D 175 (334)
T 1rjd_A 97 EKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACD 175 (334)
T ss_dssp SSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECC
T ss_pred CCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecC
Confidence 357899999999999999998888889999998 888877777665541 2579999999
Q ss_pred hhhh--hhhhhcc-CC-CeEeEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEE-EEeC-----cHHHHHHHH
Q 014711 289 ATST--FRSIVAS-YP-GKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVF-LQSD-----IEEVMLRMK 358 (420)
Q Consensus 289 a~~~--~~~~~~~-~~-~~~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~-~~td-----~~~~~~~~~ 358 (420)
+.+. +...+.. .+ .....+..-..-.+.... ...++++.+.+.. |+|.++ +..- ...+...|.
T Consensus 176 L~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~------~~~~ll~~ia~~~-~~~~~v~~e~i~~~~~~~~fg~~m~ 248 (334)
T 1rjd_A 176 LNDITETTRLLDVCTKREIPTIVISECLLCYMHNN------ESQLLINTIMSKF-SHGLWISYDPIGGSQPNDRFGAIMQ 248 (334)
T ss_dssp TTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHH------HHHHHHHHHHHHC-SSEEEEEEEECCCCSTTCCHHHHHH
T ss_pred CCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHH------HHHHHHHHHHhhC-CCcEEEEEeccCCCCCcchHHHHHH
Confidence 9874 1111111 12 223334333322222111 1146777787776 677664 4321 224555566
Q ss_pred HHHHH
Q 014711 359 QQFLE 363 (420)
Q Consensus 359 ~~l~~ 363 (420)
..+.+
T Consensus 249 ~~l~~ 253 (334)
T 1rjd_A 249 SNLKE 253 (334)
T ss_dssp HHHHH
T ss_pred HHhhc
Confidence 66665
No 341
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=90.59 E-value=0.89 Score=44.76 Aligned_cols=107 Identities=12% Similarity=0.096 Sum_probs=64.8
Q ss_pred CCCEEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEc--C-hhhhhhhhhccCCCeEe
Q 014711 230 AQPLVVDIGSGN-GLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIAT--N-ATSTFRSIVASYPGKLI 305 (420)
Q Consensus 230 ~~~~vLDIGcG~-G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~--D-a~~~~~~~~~~~~~~~d 305 (420)
.+..||-+|||. |.+++.+|+..-...|+++|.+++.++.+++ .|.. .+... | ..+.+.+.. ....+|
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~----lGa~--~i~~~~~~~~~~~v~~~t--~g~g~D 256 (398)
T 1kol_A 185 PGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA----QGFE--IADLSLDTPLHEQIAALL--GEPEVD 256 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTCE--EEETTSSSCHHHHHHHHH--SSSCEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHH----cCCc--EEccCCcchHHHHHHHHh--CCCCCC
Confidence 467888899977 8889999998644479999999998887754 4542 12111 1 122112222 234689
Q ss_pred EEEEeCCCCCCC-C---cchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 306 LVSIQCPNPDFN-R---PEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 306 ~i~~~fpdp~~k-~---~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
.++-.-..+... . -|+. -.+..+....+.|++||++.+.
T Consensus 257 vvid~~G~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~G~iv~~ 299 (398)
T 1kol_A 257 CAVDAVGFEARGHGHEGAKHE---APATVLNSLMQVTRVAGKIGIP 299 (398)
T ss_dssp EEEECCCTTCBCSSTTGGGSB---CTTHHHHHHHHHEEEEEEEEEC
T ss_pred EEEECCCCccccccccccccc---chHHHHHHHHHHHhcCCEEEEe
Confidence 886543322100 0 0000 0124678889999999998763
No 342
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=90.56 E-value=0.72 Score=44.52 Aligned_cols=88 Identities=17% Similarity=0.141 Sum_probs=62.1
Q ss_pred CCCEEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGN-GLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~-G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
.+..||=+|+|. |..++.+|+.. ..+|+++|.+++.++.+++ .|...+- .|...+ ...+|.++
T Consensus 176 ~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~----lGa~~v~---~~~~~~--------~~~~D~vi 239 (348)
T 3two_A 176 KGTKVGVAGFGGLGSMAVKYAVAM-GAEVSVFARNEHKKQDALS----MGVKHFY---TDPKQC--------KEELDFII 239 (348)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHT-TCEEEEECSSSTTHHHHHH----TTCSEEE---SSGGGC--------CSCEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHh----cCCCeec---CCHHHH--------hcCCCEEE
Confidence 467888899986 88888899876 5699999999988877644 5544332 333222 22688887
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
-....+ ..+....+.|+|+|++.+.
T Consensus 240 d~~g~~--------------~~~~~~~~~l~~~G~iv~~ 264 (348)
T 3two_A 240 STIPTH--------------YDLKDYLKLLTYNGDLALV 264 (348)
T ss_dssp ECCCSC--------------CCHHHHHTTEEEEEEEEEC
T ss_pred ECCCcH--------------HHHHHHHHHHhcCCEEEEE
Confidence 553333 2456778899999998875
No 343
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=90.04 E-value=1.2 Score=43.34 Aligned_cols=96 Identities=11% Similarity=0.108 Sum_probs=62.6
Q ss_pred CCCEEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEc----ChhhhhhhhhccCCCeE
Q 014711 230 AQPLVVDIGSGN-GLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIAT----NATSTFRSIVASYPGKL 304 (420)
Q Consensus 230 ~~~~vLDIGcG~-G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~----Da~~~~~~~~~~~~~~~ 304 (420)
.+..||-+|+|. |..++.+|+..-..+|+++|.+++.++.+++ .|...+ +-.. |..+.+.+.. .+.+
T Consensus 192 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa~~v-i~~~~~~~~~~~~~~~~~---~~g~ 263 (374)
T 1cdo_A 192 PGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV----FGATDF-VNPNDHSEPISQVLSKMT---NGGV 263 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTCCEE-ECGGGCSSCHHHHHHHHH---TSCB
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----hCCceE-EeccccchhHHHHHHHHh---CCCC
Confidence 467888899876 7888889988643389999999998887753 454322 1111 1222222221 2368
Q ss_pred eEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCC-eEEEEE
Q 014711 305 ILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHD-GKVFLQ 347 (420)
Q Consensus 305 d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~Lkpg-G~l~~~ 347 (420)
|.++-.-.. +..+....+.|+++ |++++.
T Consensus 264 D~vid~~g~--------------~~~~~~~~~~l~~~~G~iv~~ 293 (374)
T 1cdo_A 264 DFSLECVGN--------------VGVMRNALESCLKGWGVSVLV 293 (374)
T ss_dssp SEEEECSCC--------------HHHHHHHHHTBCTTTCEEEEC
T ss_pred CEEEECCCC--------------HHHHHHHHHHhhcCCcEEEEE
Confidence 888654221 25778889999999 998764
No 344
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=89.92 E-value=0.98 Score=44.13 Aligned_cols=100 Identities=19% Similarity=0.161 Sum_probs=64.4
Q ss_pred CCCEEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEE-EEEcChhhhhhhhhccCCCeEeEE
Q 014711 230 AQPLVVDIGSGN-GLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGY-FIATNATSTFRSIVASYPGKLILV 307 (420)
Q Consensus 230 ~~~~vLDIGcG~-G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~-~~~~Da~~~~~~~~~~~~~~~d~i 307 (420)
.+..||=+|+|. |..++.+|+..-...|+++|.+++..+.+++ .|...+. ....|..+.+.+......+.+|.+
T Consensus 182 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvv 257 (370)
T 4ej6_A 182 AGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEE----VGATATVDPSAGDVVEAIAGPVGLVPGGVDVV 257 (370)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHH----HTCSEEECTTSSCHHHHHHSTTSSSTTCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----cCCCEEECCCCcCHHHHHHhhhhccCCCCCEE
Confidence 467788899976 8888889988644489999999998877755 4543211 111222222221000113478988
Q ss_pred EEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 308 SIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 308 ~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
+-.... ...++...+.|++||++.+.
T Consensus 258 id~~G~--------------~~~~~~~~~~l~~~G~vv~~ 283 (370)
T 4ej6_A 258 IECAGV--------------AETVKQSTRLAKAGGTVVIL 283 (370)
T ss_dssp EECSCC--------------HHHHHHHHHHEEEEEEEEEC
T ss_pred EECCCC--------------HHHHHHHHHHhccCCEEEEE
Confidence 654221 26788899999999999874
No 345
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=89.80 E-value=0.85 Score=44.45 Aligned_cols=96 Identities=17% Similarity=0.250 Sum_probs=62.7
Q ss_pred CCEEEEEc-CC-ccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 231 QPLVVDIG-SG-NGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 231 ~~~vLDIG-cG-~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
+..||=+| +| .|..++.+|+.....+|+++|.+++.++.+++ .|...+--...|..+.+.+. ....+|.++
T Consensus 172 g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~----lGad~vi~~~~~~~~~v~~~---~~~g~Dvvi 244 (363)
T 4dvj_A 172 APAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKS----LGAHHVIDHSKPLAAEVAAL---GLGAPAFVF 244 (363)
T ss_dssp EEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH----TTCSEEECTTSCHHHHHHTT---CSCCEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH----cCCCEEEeCCCCHHHHHHHh---cCCCceEEE
Confidence 56788888 54 48889999987567899999999988877754 45432211111222111111 235688876
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
-... .+..+..+.++|+++|++++.
T Consensus 245 d~~g--------------~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 245 STTH--------------TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp ECSC--------------HHHHHHHHHHHSCTTCEEEEC
T ss_pred ECCC--------------chhhHHHHHHHhcCCCEEEEE
Confidence 5411 125778889999999999874
No 346
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=89.59 E-value=0.68 Score=40.59 Aligned_cols=96 Identities=8% Similarity=-0.003 Sum_probs=59.9
Q ss_pred CCCEEEEEcC--CccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEc--ChhhhhhhhhccCCCeEe
Q 014711 230 AQPLVVDIGS--GNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIAT--NATSTFRSIVASYPGKLI 305 (420)
Q Consensus 230 ~~~~vLDIGc--G~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~--Da~~~~~~~~~~~~~~~d 305 (420)
.+..||.+|+ |.|..++.+++.. +.+++++|.+++.++.+++ .+... .+-.. +..+.+.+.. ....+|
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~-G~~V~~~~~~~~~~~~~~~----~g~~~-~~d~~~~~~~~~~~~~~--~~~~~D 109 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMI-GARIYTTAGSDAKREMLSR----LGVEY-VGDSRSVDFADEILELT--DGYGVD 109 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHT----TCCSE-EEETTCSTHHHHHHHHT--TTCCEE
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH----cCCCE-EeeCCcHHHHHHHHHHh--CCCCCe
Confidence 4678999994 5577777777764 5789999999987766533 34322 12111 1111111111 234689
Q ss_pred EEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEe
Q 014711 306 LVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 348 (420)
Q Consensus 306 ~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~t 348 (420)
.++-+- -+ ..++...+.|+|+|++++..
T Consensus 110 ~vi~~~-g~--------------~~~~~~~~~l~~~G~~v~~g 137 (198)
T 1pqw_A 110 VVLNSL-AG--------------EAIQRGVQILAPGGRFIELG 137 (198)
T ss_dssp EEEECC-CT--------------HHHHHHHHTEEEEEEEEECS
T ss_pred EEEECC-ch--------------HHHHHHHHHhccCCEEEEEc
Confidence 887542 11 46778889999999998753
No 347
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=89.30 E-value=1.3 Score=43.07 Aligned_cols=96 Identities=8% Similarity=0.022 Sum_probs=62.9
Q ss_pred CCCEEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEc----ChhhhhhhhhccCCCeE
Q 014711 230 AQPLVVDIGSGN-GLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIAT----NATSTFRSIVASYPGKL 304 (420)
Q Consensus 230 ~~~~vLDIGcG~-G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~----Da~~~~~~~~~~~~~~~ 304 (420)
.+..||=+|+|. |..++.+|+..-..+|+++|.+++.++.+++ .|...+ +-.. |..+.+.+. ..+.+
T Consensus 191 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~~v-i~~~~~~~~~~~~i~~~---t~gg~ 262 (373)
T 1p0f_A 191 PGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE----LGATEC-LNPKDYDKPIYEVICEK---TNGGV 262 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH----TTCSEE-ECGGGCSSCHHHHHHHH---TTSCB
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH----cCCcEE-EecccccchHHHHHHHH---hCCCC
Confidence 467888899875 7888888987643489999999998877753 454322 1111 222222222 13468
Q ss_pred eEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCC-eEEEEE
Q 014711 305 ILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHD-GKVFLQ 347 (420)
Q Consensus 305 d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~Lkpg-G~l~~~ 347 (420)
|.++-.-.. +..+....+.|+++ |++++.
T Consensus 263 Dvvid~~g~--------------~~~~~~~~~~l~~~~G~iv~~ 292 (373)
T 1p0f_A 263 DYAVECAGR--------------IETMMNALQSTYCGSGVTVVL 292 (373)
T ss_dssp SEEEECSCC--------------HHHHHHHHHTBCTTTCEEEEC
T ss_pred CEEEECCCC--------------HHHHHHHHHHHhcCCCEEEEE
Confidence 888654221 25778889999999 998764
No 348
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=89.30 E-value=2.1 Score=41.39 Aligned_cols=98 Identities=13% Similarity=0.032 Sum_probs=63.3
Q ss_pred CCCEEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEE--cChhhh---hhhhhccCCCe
Q 014711 230 AQPLVVDIGSGN-GLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIA--TNATST---FRSIVASYPGK 303 (420)
Q Consensus 230 ~~~~vLDIGcG~-G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~--~Da~~~---~~~~~~~~~~~ 303 (420)
.+..||=+|+|. |..++.+|+..--..|+++|.+++.++.+++.+ . .-+.+.. .+..++ +.+.. ....
T Consensus 179 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l~-~---~~~~~~~~~~~~~~~~~~v~~~t--~g~g 252 (363)
T 3m6i_A 179 LGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEIC-P---EVVTHKVERLSAEESAKKIVESF--GGIE 252 (363)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHC-T---TCEEEECCSCCHHHHHHHHHHHT--SSCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhc-h---hcccccccccchHHHHHHHHHHh--CCCC
Confidence 356677789977 888899998864445999999999998887651 1 1122221 111222 11211 2346
Q ss_pred EeEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 304 LILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 304 ~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
+|.++-.... +..+....+.|+++|++++.
T Consensus 253 ~Dvvid~~g~--------------~~~~~~~~~~l~~~G~iv~~ 282 (363)
T 3m6i_A 253 PAVALECTGV--------------ESSIAAAIWAVKFGGKVFVI 282 (363)
T ss_dssp CSEEEECSCC--------------HHHHHHHHHHSCTTCEEEEC
T ss_pred CCEEEECCCC--------------hHHHHHHHHHhcCCCEEEEE
Confidence 8888654222 25778889999999999874
No 349
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=89.21 E-value=1.6 Score=42.50 Aligned_cols=96 Identities=10% Similarity=0.124 Sum_probs=62.6
Q ss_pred CCCEEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEc----ChhhhhhhhhccCCCeE
Q 014711 230 AQPLVVDIGSGN-GLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIAT----NATSTFRSIVASYPGKL 304 (420)
Q Consensus 230 ~~~~vLDIGcG~-G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~----Da~~~~~~~~~~~~~~~ 304 (420)
.+..||-+|+|. |..++.+|+..-..+|+++|.+++.++.+++ .|...+ +-.. |..+.+.+. ..+.+
T Consensus 191 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa~~v-i~~~~~~~~~~~~~~~~---~~~g~ 262 (374)
T 2jhf_A 191 QGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE----VGATEC-VNPQDYKKPIQEVLTEM---SNGGV 262 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTCSEE-ECGGGCSSCHHHHHHHH---TTSCB
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----hCCceE-ecccccchhHHHHHHHH---hCCCC
Confidence 467888899876 7888888988643389999999998877743 454322 1111 122221221 13468
Q ss_pred eEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCC-eEEEEE
Q 014711 305 ILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHD-GKVFLQ 347 (420)
Q Consensus 305 d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~Lkpg-G~l~~~ 347 (420)
|.++-.-.. +..+....+.|+++ |++.+.
T Consensus 263 D~vid~~g~--------------~~~~~~~~~~l~~~~G~iv~~ 292 (374)
T 2jhf_A 263 DFSFEVIGR--------------LDTMVTALSCCQEAYGVSVIV 292 (374)
T ss_dssp SEEEECSCC--------------HHHHHHHHHHBCTTTCEEEEC
T ss_pred cEEEECCCC--------------HHHHHHHHHHhhcCCcEEEEe
Confidence 888654222 25778889999999 998763
No 350
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=89.07 E-value=0.95 Score=43.14 Aligned_cols=77 Identities=16% Similarity=0.063 Sum_probs=55.9
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCe-EEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKDLN-FLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~~~-viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
...+++|+-||.|.+...+.+..-+.. +.++|+++.+++.-+.|. ++..++++|+.++....++ ....+|.++
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~-----~~~~~~~~DI~~i~~~~i~-~~~~~Dll~ 88 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRH-----QGKIMYVGDVRSVTQKHIQ-EWGPFDLVI 88 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHT-----TTCEEEECCGGGCCHHHHH-HTCCCSEEE
T ss_pred CCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhC-----CCCceeCCChHHccHHHhc-ccCCcCEEE
Confidence 356899999999999999887732332 699999999988776653 2446788999887543332 124689998
Q ss_pred EeCC
Q 014711 309 IQCP 312 (420)
Q Consensus 309 ~~fp 312 (420)
..+|
T Consensus 89 ggpP 92 (295)
T 2qrv_A 89 GGSP 92 (295)
T ss_dssp ECCC
T ss_pred ecCC
Confidence 8764
No 351
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=88.72 E-value=1.5 Score=42.60 Aligned_cols=96 Identities=13% Similarity=0.152 Sum_probs=62.7
Q ss_pred CCCEEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEc----ChhhhhhhhhccCCCeE
Q 014711 230 AQPLVVDIGSGN-GLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIAT----NATSTFRSIVASYPGKL 304 (420)
Q Consensus 230 ~~~~vLDIGcG~-G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~----Da~~~~~~~~~~~~~~~ 304 (420)
.+..||=+|+|. |..++.+|+..-..+|+++|.+++.++.+++ .|...+ +-.. |..+.+.+. ..+.+
T Consensus 190 ~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa~~v-i~~~~~~~~~~~~v~~~---~~~g~ 261 (373)
T 2fzw_A 190 PGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKE----FGATEC-INPQDFSKPIQEVLIEM---TDGGV 261 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH----HTCSEE-ECGGGCSSCHHHHHHHH---TTSCB
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----cCCceE-eccccccccHHHHHHHH---hCCCC
Confidence 467888899876 7788888887643389999999998887754 454322 1111 122222222 13468
Q ss_pred eEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCC-eEEEEE
Q 014711 305 ILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHD-GKVFLQ 347 (420)
Q Consensus 305 d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~Lkpg-G~l~~~ 347 (420)
|.++-.... +..+....+.|+++ |++++.
T Consensus 262 D~vid~~g~--------------~~~~~~~~~~l~~~~G~iv~~ 291 (373)
T 2fzw_A 262 DYSFECIGN--------------VKVMRAALEACHKGWGVSVVV 291 (373)
T ss_dssp SEEEECSCC--------------HHHHHHHHHTBCTTTCEEEEC
T ss_pred CEEEECCCc--------------HHHHHHHHHhhccCCcEEEEE
Confidence 888654222 25778889999999 998764
No 352
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=88.61 E-value=1.8 Score=42.20 Aligned_cols=96 Identities=14% Similarity=0.158 Sum_probs=62.4
Q ss_pred CCCEEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEc----ChhhhhhhhhccCCCeE
Q 014711 230 AQPLVVDIGSGN-GLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIAT----NATSTFRSIVASYPGKL 304 (420)
Q Consensus 230 ~~~~vLDIGcG~-G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~----Da~~~~~~~~~~~~~~~ 304 (420)
.+..||=+|+|. |.+++.+|+..-..+|+++|.+++.++.+++ .|...+ +-.. |..+.+.+.. .+.+
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~~v-i~~~~~~~~~~~~v~~~~---~~g~ 266 (376)
T 1e3i_A 195 PGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA----LGATDC-LNPRELDKPVQDVITELT---AGGV 266 (376)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTCSEE-ECGGGCSSCHHHHHHHHH---TSCB
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----hCCcEE-EccccccchHHHHHHHHh---CCCc
Confidence 467888899875 7888888988643389999999998877743 454322 1111 2222222221 2368
Q ss_pred eEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCC-eEEEEE
Q 014711 305 ILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHD-GKVFLQ 347 (420)
Q Consensus 305 d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~Lkpg-G~l~~~ 347 (420)
|.++-.-.. +..+....+.|+++ |++.+.
T Consensus 267 Dvvid~~G~--------------~~~~~~~~~~l~~~~G~iv~~ 296 (376)
T 1e3i_A 267 DYSLDCAGT--------------AQTLKAAVDCTVLGWGSCTVV 296 (376)
T ss_dssp SEEEESSCC--------------HHHHHHHHHTBCTTTCEEEEC
T ss_pred cEEEECCCC--------------HHHHHHHHHHhhcCCCEEEEE
Confidence 888654221 25778889999999 998763
No 353
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=88.52 E-value=1.6 Score=42.61 Aligned_cols=96 Identities=18% Similarity=0.124 Sum_probs=62.7
Q ss_pred CCCEEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcC---hhhh---hhhhhccCCC
Q 014711 230 AQPLVVDIGSGN-GLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATN---ATST---FRSIVASYPG 302 (420)
Q Consensus 230 ~~~~vLDIGcG~-G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~D---a~~~---~~~~~~~~~~ 302 (420)
.+..||-+|+|. |..++.+|+..-..+++++|.+++.++.+++ .|... ++..+ -.++ +.+.. ...
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~----lGa~~--vi~~~~~~~~~~~~~v~~~~--~g~ 266 (380)
T 1vj0_A 195 AGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE----IGADL--TLNRRETSVEERRKAIMDIT--HGR 266 (380)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHH----TTCSE--EEETTTSCHHHHHHHHHHHT--TTS
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHH----cCCcE--EEeccccCcchHHHHHHHHh--CCC
Confidence 467899999774 7778888888633699999999988877753 45432 22222 1122 11211 223
Q ss_pred eEeEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 303 KLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 303 ~~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
.+|.++-.-..+ ..+....+.|+++|++.+.
T Consensus 267 g~Dvvid~~g~~--------------~~~~~~~~~l~~~G~iv~~ 297 (380)
T 1vj0_A 267 GADFILEATGDS--------------RALLEGSELLRRGGFYSVA 297 (380)
T ss_dssp CEEEEEECSSCT--------------THHHHHHHHEEEEEEEEEC
T ss_pred CCcEEEECCCCH--------------HHHHHHHHHHhcCCEEEEE
Confidence 689887653322 4667788999999998764
No 354
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=88.01 E-value=1.4 Score=42.52 Aligned_cols=96 Identities=15% Similarity=0.094 Sum_probs=61.9
Q ss_pred CCCEEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEc---ChhhhhhhhhccCCCeEe
Q 014711 230 AQPLVVDIGSGN-GLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIAT---NATSTFRSIVASYPGKLI 305 (420)
Q Consensus 230 ~~~~vLDIGcG~-G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~---Da~~~~~~~~~~~~~~~d 305 (420)
.+..||-+|+|. |..++.+|+..-..+++++|.+++.++.+++ .|...+ +.. |..+.+.+.. ....+|
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~----~Ga~~~--~~~~~~~~~~~v~~~~--~g~g~D 238 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKK----VGADYV--INPFEEDVVKEVMDIT--DGNGVD 238 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHH----HTCSEE--ECTTTSCHHHHHHHHT--TTSCEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----hCCCEE--ECCCCcCHHHHHHHHc--CCCCCC
Confidence 357799999964 7788888887633389999999988877753 343321 221 2222111211 233689
Q ss_pred EEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 306 LVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 306 ~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
.++-.-.. +..+..+.+.|+++|++.+.
T Consensus 239 ~vid~~g~--------------~~~~~~~~~~l~~~G~iv~~ 266 (348)
T 2d8a_A 239 VFLEFSGA--------------PKALEQGLQAVTPAGRVSLL 266 (348)
T ss_dssp EEEECSCC--------------HHHHHHHHHHEEEEEEEEEC
T ss_pred EEEECCCC--------------HHHHHHHHHHHhcCCEEEEE
Confidence 88665222 25678888999999998864
No 355
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=87.92 E-value=3.5 Score=33.74 Aligned_cols=110 Identities=13% Similarity=0.061 Sum_probs=65.2
Q ss_pred CEEEEEcCCccHHHHHHHHh--CCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 232 PLVVDIGSGNGLFLLGMARK--RKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 232 ~~vLDIGcG~G~~~~~lA~~--~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
..++=+||| .++..+++. .-+..|+++|.+++.++.+++ . .+.++.+|+.+.. .+-...-...|.+++
T Consensus 7 ~~v~I~G~G--~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~----~---~~~~~~gd~~~~~-~l~~~~~~~~d~vi~ 76 (141)
T 3llv_A 7 YEYIVIGSE--AAGVGLVRELTAAGKKVLAVDKSKEKIELLED----E---GFDAVIADPTDES-FYRSLDLEGVSAVLI 76 (141)
T ss_dssp CSEEEECCS--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T---TCEEEECCTTCHH-HHHHSCCTTCSEEEE
T ss_pred CEEEEECCC--HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----C---CCcEEECCCCCHH-HHHhCCcccCCEEEE
Confidence 457778885 466555554 236789999999988766643 2 3577888887641 111101245788877
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHHHHHHHHHHHHcCCc
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKG 367 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~~~~~~~~l~~~g~~ 367 (420)
..++.- . ...+....+.+. ...++.....+.+. +.+++.|..
T Consensus 77 ~~~~~~----------~-n~~~~~~a~~~~-~~~iia~~~~~~~~----~~l~~~G~~ 118 (141)
T 3llv_A 77 TGSDDE----------F-NLKILKALRSVS-DVYAIVRVSSPKKK----EEFEEAGAN 118 (141)
T ss_dssp CCSCHH----------H-HHHHHHHHHHHC-CCCEEEEESCGGGH----HHHHHTTCS
T ss_pred ecCCHH----------H-HHHHHHHHHHhC-CceEEEEEcChhHH----HHHHHcCCC
Confidence 654321 1 133444555566 66777766655543 345666654
No 356
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=87.87 E-value=3.8 Score=35.18 Aligned_cols=112 Identities=18% Similarity=0.217 Sum_probs=65.2
Q ss_pred CCEEEEEcCCccHHHHHHHHh--CC-CCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccC--CCeEe
Q 014711 231 QPLVVDIGSGNGLFLLGMARK--RK-DLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASY--PGKLI 305 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~--~P-~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~--~~~~d 305 (420)
+..|+=+||| .++..+++. .. +..|+++|.+++.++.+++ .+ +..+.+|..+. . .+... -...|
T Consensus 39 ~~~v~IiG~G--~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~----~g---~~~~~gd~~~~-~-~l~~~~~~~~ad 107 (183)
T 3c85_A 39 HAQVLILGMG--RIGTGAYDELRARYGKISLGIEIREEAAQQHRS----EG---RNVISGDATDP-D-FWERILDTGHVK 107 (183)
T ss_dssp TCSEEEECCS--HHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH----TT---CCEEECCTTCH-H-HHHTBCSCCCCC
T ss_pred CCcEEEECCC--HHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH----CC---CCEEEcCCCCH-H-HHHhccCCCCCC
Confidence 3457777775 555544443 12 5689999999987765542 33 45667777543 1 11101 23578
Q ss_pred EEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHHHHHHHHHHHHcCCce
Q 014711 306 LVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKGK 368 (420)
Q Consensus 306 ~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~~~~~~~~l~~~g~~~ 368 (420)
.|++..|++. .+ ..+-...+.+.|+..++..+......+ .+.+.|...
T Consensus 108 ~vi~~~~~~~----------~~-~~~~~~~~~~~~~~~ii~~~~~~~~~~----~l~~~G~~~ 155 (183)
T 3c85_A 108 LVLLAMPHHQ----------GN-QTALEQLQRRNYKGQIAAIAEYPDQLE----GLLESGVDA 155 (183)
T ss_dssp EEEECCSSHH----------HH-HHHHHHHHHTTCCSEEEEEESSHHHHH----HHHHHTCSE
T ss_pred EEEEeCCChH----------HH-HHHHHHHHHHCCCCEEEEEECCHHHHH----HHHHcCCCE
Confidence 8887655431 11 223345667778889888887665433 455566543
No 357
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=87.74 E-value=1.4 Score=42.98 Aligned_cols=96 Identities=15% Similarity=0.157 Sum_probs=63.0
Q ss_pred CCCEEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEE----cChhhhhhhhhccCCCeE
Q 014711 230 AQPLVVDIGSGN-GLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIA----TNATSTFRSIVASYPGKL 304 (420)
Q Consensus 230 ~~~~vLDIGcG~-G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~----~Da~~~~~~~~~~~~~~~ 304 (420)
.+..||=+|+|. |..++.+|+..-..+|+++|.+++.++.+++ .|...+ +-. .|..+.+.+. .++.+
T Consensus 193 ~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~----lGa~~v-i~~~~~~~~~~~~i~~~---~~gg~ 264 (378)
T 3uko_A 193 PGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKK----FGVNEF-VNPKDHDKPIQEVIVDL---TDGGV 264 (378)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHT----TTCCEE-ECGGGCSSCHHHHHHHH---TTSCB
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----cCCcEE-EccccCchhHHHHHHHh---cCCCC
Confidence 356788889975 8888889988644489999999998887643 454321 111 1222222222 23478
Q ss_pred eEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCC-eEEEEE
Q 014711 305 ILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHD-GKVFLQ 347 (420)
Q Consensus 305 d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~Lkpg-G~l~~~ 347 (420)
|.++-.... +..+....+.|++| |++.+.
T Consensus 265 D~vid~~g~--------------~~~~~~~~~~l~~g~G~iv~~ 294 (378)
T 3uko_A 265 DYSFECIGN--------------VSVMRAALECCHKGWGTSVIV 294 (378)
T ss_dssp SEEEECSCC--------------HHHHHHHHHTBCTTTCEEEEC
T ss_pred CEEEECCCC--------------HHHHHHHHHHhhccCCEEEEE
Confidence 988764322 26788899999997 998874
No 358
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=87.63 E-value=2.3 Score=42.42 Aligned_cols=100 Identities=12% Similarity=0.056 Sum_probs=64.9
Q ss_pred CEEEEEcCCccHHHHHHHHh--CCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhc-cCCCeEeEEE
Q 014711 232 PLVVDIGSGNGLFLLGMARK--RKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVA-SYPGKLILVS 308 (420)
Q Consensus 232 ~~vLDIGcG~G~~~~~lA~~--~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~-~~~~~~d~i~ 308 (420)
..|+=+|| |.++..+++. .-+..|+.||.+++.++.+++ .| +.++.+|+.+.. .+. ..-...|.|+
T Consensus 5 ~~viIiG~--Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~----~g---~~vi~GDat~~~--~L~~agi~~A~~vi 73 (413)
T 3l9w_A 5 MRVIIAGF--GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK----FG---MKVFYGDATRMD--LLESAGAAKAEVLI 73 (413)
T ss_dssp CSEEEECC--SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH----TT---CCCEESCTTCHH--HHHHTTTTTCSEEE
T ss_pred CeEEEECC--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh----CC---CeEEEcCCCCHH--HHHhcCCCccCEEE
Confidence 44666776 5555555543 236789999999999887753 23 567899998741 111 1234578888
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHH
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEV 353 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~ 353 (420)
+..+++. . ...+-...+.+.|...++..+.+...
T Consensus 74 v~~~~~~----------~-n~~i~~~ar~~~p~~~Iiara~~~~~ 107 (413)
T 3l9w_A 74 NAIDDPQ----------T-NLQLTEMVKEHFPHLQIIARARDVDH 107 (413)
T ss_dssp ECCSSHH----------H-HHHHHHHHHHHCTTCEEEEEESSHHH
T ss_pred ECCCChH----------H-HHHHHHHHHHhCCCCeEEEEECCHHH
Confidence 7765542 1 24456667788899888888765554
No 359
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=87.45 E-value=2.4 Score=40.39 Aligned_cols=123 Identities=11% Similarity=0.015 Sum_probs=78.5
Q ss_pred EEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEEeCC
Q 014711 233 LVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCP 312 (420)
Q Consensus 233 ~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~~fp 312 (420)
.++|+=||-|.+...+-+.. -..+.++|+++.+++.-+.|.. -.++++|+.++..+.+ ..+|.++..+|
T Consensus 2 kvidLFsG~GG~~~G~~~aG-~~~v~a~e~d~~a~~ty~~N~~------~~~~~~DI~~i~~~~~----~~~D~l~ggpP 70 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKAG-FRIICANEYDKSIWKTYESNHS------AKLIKGDISKISSDEF----PKCDGIIGGPP 70 (331)
T ss_dssp EEEEESCTTCHHHHHHHHTT-CEEEEEEECCTTTHHHHHHHCC------SEEEESCGGGCCGGGS----CCCSEEECCCC
T ss_pred eEEEeCcCccHHHHHHHHCC-CEEEEEEeCCHHHHHHHHHHCC------CCcccCChhhCCHhhC----CcccEEEecCC
Confidence 58999999999998887762 1246799999999888776632 2578899988743323 25788876654
Q ss_pred -CCCCCCc------chhhhhhHHHHHHHHHhhccCCeEEEEEe-------CcHHHHHHHHHHHHHcCCcee
Q 014711 313 -NPDFNRP------EHRWRMVQRSLVEAVSDLLVHDGKVFLQS-------DIEEVMLRMKQQFLEYGKGKL 369 (420)
Q Consensus 313 -dp~~k~~------~~k~Rl~~~~~l~~i~~~LkpgG~l~~~t-------d~~~~~~~~~~~l~~~g~~~~ 369 (420)
.++.... +.+..|+ .++++ +.+.++|. +|+++- +....++.+++.|++.||...
T Consensus 71 CQ~fS~ag~~~g~~d~R~~L~-~~~~r-~i~~~~Pk-~~~~ENV~gl~~~~~~~~~~~i~~~l~~~GY~v~ 138 (331)
T 3ubt_Y 71 SQSWSEGGSLRGIDDPRGKLF-YEYIR-ILKQKKPI-FFLAENVKGMMAQRHNKAVQEFIQEFDNAGYDVH 138 (331)
T ss_dssp GGGTEETTEECCTTCGGGHHH-HHHHH-HHHHHCCS-EEEEEECCGGGGCTTSHHHHHHHHHHHHHTEEEE
T ss_pred CCCcCCCCCccCCCCchhHHH-HHHHH-HHhccCCe-EEEeeeecccccccccchhhhhhhhhccCCcEEE
Confidence 2221111 1112232 24444 44557886 455552 334567888999999887653
No 360
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=87.24 E-value=3.8 Score=39.14 Aligned_cols=98 Identities=13% Similarity=0.060 Sum_probs=61.7
Q ss_pred CCCEEEEEcCCcc-HHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCc-EEEEEcChhhhhhhhhccCCCeEeEE
Q 014711 230 AQPLVVDIGSGNG-LFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITN-GYFIATNATSTFRSIVASYPGKLILV 307 (420)
Q Consensus 230 ~~~~vLDIGcG~G-~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~n-v~~~~~Da~~~~~~~~~~~~~~~d~i 307 (420)
.+..||=+|+|.+ .+++.+|+..-..+|+++|.+++.++.+++ .|... +..-..|..+.+.+.. ....+|.+
T Consensus 163 ~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~----~Ga~~~i~~~~~~~~~~v~~~t--~g~g~d~~ 236 (348)
T 4eez_A 163 PGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKK----IGADVTINSGDVNPVDEIKKIT--GGLGVQSA 236 (348)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHH----TTCSEEEEC-CCCHHHHHHHHT--TSSCEEEE
T ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhh----cCCeEEEeCCCCCHHHHhhhhc--CCCCceEE
Confidence 4678888999874 456667777667899999999988776644 34332 2222233333222222 23346666
Q ss_pred EEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 308 SIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 308 ~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
+..-. .+..+....+.|+++|++.+.
T Consensus 237 ~~~~~--------------~~~~~~~~~~~l~~~G~~v~~ 262 (348)
T 4eez_A 237 IVCAV--------------ARIAFEQAVASLKPMGKMVAV 262 (348)
T ss_dssp EECCS--------------CHHHHHHHHHTEEEEEEEEEC
T ss_pred EEecc--------------CcchhheeheeecCCceEEEE
Confidence 55311 136778888999999998764
No 361
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=87.18 E-value=2.5 Score=40.97 Aligned_cols=94 Identities=15% Similarity=0.108 Sum_probs=62.6
Q ss_pred CCCEEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcC---hhhhhhhhhccCCCeEe
Q 014711 230 AQPLVVDIGSGN-GLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATN---ATSTFRSIVASYPGKLI 305 (420)
Q Consensus 230 ~~~~vLDIGcG~-G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~D---a~~~~~~~~~~~~~~~d 305 (420)
.+..||=+|+|. |..++.+|+.. ..+++++|.+++.++.+++ .|...+ +..+ ..+.+.+.. ....+|
T Consensus 189 ~g~~VlV~G~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~----lGa~~v--i~~~~~~~~~~v~~~~--~g~g~D 259 (363)
T 3uog_A 189 AGDRVVVQGTGGVALFGLQIAKAT-GAEVIVTSSSREKLDRAFA----LGADHG--INRLEEDWVERVYALT--GDRGAD 259 (363)
T ss_dssp TTCEEEEESSBHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHH----HTCSEE--EETTTSCHHHHHHHHH--TTCCEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEecCchhHHHHHH----cCCCEE--EcCCcccHHHHHHHHh--CCCCce
Confidence 467899999886 78888888875 5699999999988877654 454322 2222 222112222 234689
Q ss_pred EEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 306 LVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 306 ~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
.++-.... ..+....+.|+|+|++.+.
T Consensus 260 ~vid~~g~---------------~~~~~~~~~l~~~G~iv~~ 286 (363)
T 3uog_A 260 HILEIAGG---------------AGLGQSLKAVAPDGRISVI 286 (363)
T ss_dssp EEEEETTS---------------SCHHHHHHHEEEEEEEEEE
T ss_pred EEEECCCh---------------HHHHHHHHHhhcCCEEEEE
Confidence 88765331 2456677899999999875
No 362
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=87.09 E-value=2.6 Score=41.10 Aligned_cols=93 Identities=13% Similarity=0.182 Sum_probs=61.2
Q ss_pred CCCEEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGN-GLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~-G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
.+..||-+|+|. |..++.+|+.. +.+++++|.+++.++.+++ .|...+ +..+-.+.... + ...+|.++
T Consensus 194 ~g~~VlV~GaG~vG~~aiqlak~~-Ga~Vi~~~~~~~~~~~a~~----lGa~~v--i~~~~~~~~~~-~---~~g~Dvvi 262 (369)
T 1uuf_A 194 PGKKVGVVGIGGLGHMGIKLAHAM-GAHVVAFTTSEAKREAAKA----LGADEV--VNSRNADEMAA-H---LKSFDFIL 262 (369)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHH----HTCSEE--EETTCHHHHHT-T---TTCEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH----cCCcEE--eccccHHHHHH-h---hcCCCEEE
Confidence 467889999986 88888899876 5689999999998887754 454322 22211122111 1 24688886
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
-.-..+ ..++...+.|+++|++.+.
T Consensus 263 d~~g~~--------------~~~~~~~~~l~~~G~iv~~ 287 (369)
T 1uuf_A 263 NTVAAP--------------HNLDDFTTLLKRDGTMTLV 287 (369)
T ss_dssp ECCSSC--------------CCHHHHHTTEEEEEEEEEC
T ss_pred ECCCCH--------------HHHHHHHHHhccCCEEEEe
Confidence 543332 2456677899999998764
No 363
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=87.01 E-value=3 Score=37.16 Aligned_cols=101 Identities=13% Similarity=0.069 Sum_probs=62.1
Q ss_pred EEEEcCCccHHHHHHHHh--CCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEEeC
Q 014711 234 VVDIGSGNGLFLLGMARK--RKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQC 311 (420)
Q Consensus 234 vLDIGcG~G~~~~~lA~~--~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~~f 311 (420)
|+=+| .|.++..+|+. ..+..|+.+|.+++.++...+. . ++.++.+|+.+.. .+-...-...|.+++..
T Consensus 3 iiIiG--~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~---~---~~~~i~gd~~~~~-~l~~a~i~~ad~vi~~~ 73 (218)
T 3l4b_C 3 VIIIG--GETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK---L---KATIIHGDGSHKE-ILRDAEVSKNDVVVILT 73 (218)
T ss_dssp EEEEC--CHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH---S---SSEEEESCTTSHH-HHHHHTCCTTCEEEECC
T ss_pred EEEEC--CCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH---c---CCeEEEcCCCCHH-HHHhcCcccCCEEEEec
Confidence 34445 47777777765 2467899999999887654332 2 3578899987641 11000123568887765
Q ss_pred CCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHHH
Q 014711 312 PNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVM 354 (420)
Q Consensus 312 pdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~~ 354 (420)
++.. ...++....+.+.|...++..+.++.+.
T Consensus 74 ~~d~-----------~n~~~~~~a~~~~~~~~iia~~~~~~~~ 105 (218)
T 3l4b_C 74 PRDE-----------VNLFIAQLVMKDFGVKRVVSLVNDPGNM 105 (218)
T ss_dssp SCHH-----------HHHHHHHHHHHTSCCCEEEECCCSGGGH
T ss_pred CCcH-----------HHHHHHHHHHHHcCCCeEEEEEeCcchH
Confidence 5431 1245566666777778887776665543
No 364
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=86.82 E-value=1.9 Score=41.48 Aligned_cols=95 Identities=18% Similarity=0.148 Sum_probs=61.9
Q ss_pred CCCEEEEEcC--CccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEc---ChhhhhhhhhccCCCeE
Q 014711 230 AQPLVVDIGS--GNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIAT---NATSTFRSIVASYPGKL 304 (420)
Q Consensus 230 ~~~~vLDIGc--G~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~---Da~~~~~~~~~~~~~~~ 304 (420)
.+..+|-+|+ |.|..++.+++.. ..+++++|.+++.++.+++ .|... .+-.. +..+.+.... ++.+
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~~-Ga~V~~~~~~~~~~~~~~~----~g~~~-~~d~~~~~~~~~~~~~~~---~~~~ 239 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKAM-GYRVLGIDGGEGKEELFRS----IGGEV-FIDFTKEKDIVGAVLKAT---DGGA 239 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECSTTHHHHHHH----TTCCE-EEETTTCSCHHHHHHHHH---TSCE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCcEEEEcCCHHHHHHHHH----cCCce-EEecCccHhHHHHHHHHh---CCCC
Confidence 4688999999 5788888888875 5699999999887766643 34331 12111 2222222222 2268
Q ss_pred eEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 305 ILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 305 d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
|.++-+... ...++.+.+.|+++|++++.
T Consensus 240 D~vi~~~g~--------------~~~~~~~~~~l~~~G~iv~~ 268 (347)
T 2hcy_A 240 HGVINVSVS--------------EAAIEASTRYVRANGTTVLV 268 (347)
T ss_dssp EEEEECSSC--------------HHHHHHHTTSEEEEEEEEEC
T ss_pred CEEEECCCc--------------HHHHHHHHHHHhcCCEEEEE
Confidence 888665221 25778889999999998764
No 365
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=86.54 E-value=1.4 Score=42.46 Aligned_cols=97 Identities=15% Similarity=0.222 Sum_probs=62.1
Q ss_pred CCCEEEEEcCC--ccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcC--hhhhhhhhhccCCCeEe
Q 014711 230 AQPLVVDIGSG--NGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATN--ATSTFRSIVASYPGKLI 305 (420)
Q Consensus 230 ~~~~vLDIGcG--~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~D--a~~~~~~~~~~~~~~~d 305 (420)
.+..+|-+|+| .|..++.+++..+..+++++|.+++.++.+++ .|... .+-..| ..+.+.+.. ..+.+|
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~----~g~~~-~~~~~~~~~~~~~~~~~--~~~~~d 242 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR----AGADY-VINASMQDPLAEIRRIT--ESKGVD 242 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH----HTCSE-EEETTTSCHHHHHHHHT--TTSCEE
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----hCCCE-EecCCCccHHHHHHHHh--cCCCce
Confidence 46889999998 66777888887646799999999988877743 34332 222222 111111211 114788
Q ss_pred EEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 306 LVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 306 ~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
.++-.-.. +..++...+.|+++|++++.
T Consensus 243 ~vi~~~g~--------------~~~~~~~~~~l~~~G~iv~~ 270 (347)
T 1jvb_A 243 AVIDLNNS--------------EKTLSVYPKALAKQGKYVMV 270 (347)
T ss_dssp EEEESCCC--------------HHHHTTGGGGEEEEEEEEEC
T ss_pred EEEECCCC--------------HHHHHHHHHHHhcCCEEEEE
Confidence 88654221 24677788999999998764
No 366
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=86.07 E-value=2.6 Score=40.11 Aligned_cols=94 Identities=11% Similarity=0.103 Sum_probs=60.6
Q ss_pred CCCEEEEEcC--CccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEc---ChhhhhhhhhccCCCeE
Q 014711 230 AQPLVVDIGS--GNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIAT---NATSTFRSIVASYPGKL 304 (420)
Q Consensus 230 ~~~~vLDIGc--G~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~---Da~~~~~~~~~~~~~~~ 304 (420)
.+..+|-.|| |.|..++.+++.. +.+++++|.+++.++.+++ .+.. ..+-.. +..+.+... ..+.+
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~~-G~~V~~~~~~~~~~~~~~~----~g~~-~~~d~~~~~~~~~~~~~~---~~~~~ 215 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKLK-GCKVVGAAGSDEKIAYLKQ----IGFD-AAFNYKTVNSLEEALKKA---SPDGY 215 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH----TTCS-EEEETTSCSCHHHHHHHH---CTTCE
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHh----cCCc-EEEecCCHHHHHHHHHHH---hCCCC
Confidence 4688999998 6777788888765 5699999999988877622 3432 222111 222222221 12468
Q ss_pred eEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 305 ILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 305 d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
|.++-+-. ...+....+.|+++|++.+.
T Consensus 216 d~vi~~~g---------------~~~~~~~~~~l~~~G~~v~~ 243 (333)
T 1v3u_A 216 DCYFDNVG---------------GEFLNTVLSQMKDFGKIAIC 243 (333)
T ss_dssp EEEEESSC---------------HHHHHHHHTTEEEEEEEEEC
T ss_pred eEEEECCC---------------hHHHHHHHHHHhcCCEEEEE
Confidence 88865421 13567788999999998764
No 367
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=85.97 E-value=6.8 Score=39.87 Aligned_cols=132 Identities=12% Similarity=-0.011 Sum_probs=78.8
Q ss_pred CCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhh------------hc
Q 014711 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSI------------VA 298 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~------------~~ 298 (420)
..+++|+-||.|.+...+.+.. -..+.++|+++.+++.-+.|... .++..++++|+.++.... +.
T Consensus 88 ~~~viDLFaG~GGlslG~~~aG-~~~v~avE~d~~A~~ty~~N~~~--~p~~~~~~~DI~~i~~~~~~~~~~~~~~~~i~ 164 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESIG-GQCVFTSEWNKHAVRTYKANHYC--DPATHHFNEDIRDITLSHQEGVSDEAAAEHIR 164 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTTT-EEEEEEECCCHHHHHHHHHHSCC--CTTTCEEESCTHHHHCTTCTTSCHHHHHHHHH
T ss_pred cceEEEecCCccHHHHHHHHCC-CEEEEEEeCCHHHHHHHHHhccc--CCCcceeccchhhhhhccccccchhhHHhhhh
Confidence 4689999999999999987762 12489999999988877766421 123456789998874110 00
Q ss_pred cCCCeEeEEEEeCCCC-CCCCcc---------------hhhhhhHHHHHHHHHhhccCCeEEEEE-------eCcHHHHH
Q 014711 299 SYPGKLILVSIQCPNP-DFNRPE---------------HRWRMVQRSLVEAVSDLLVHDGKVFLQ-------SDIEEVML 355 (420)
Q Consensus 299 ~~~~~~d~i~~~fpdp-~~k~~~---------------~k~Rl~~~~~l~~i~~~LkpgG~l~~~-------td~~~~~~ 355 (420)
.....+|.++..+|=. +..... .+..|+ .++++.+ +.++|- .|+++ ++....+.
T Consensus 165 ~~~~~~Dvl~gGpPCQ~FS~AG~~k~~~~g~~~G~~~D~R~~Lf-~e~~riI-~~~rPk-~fvlENV~gl~s~~~g~~f~ 241 (482)
T 3me5_A 165 QHIPEHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFACDTQGTLF-FDVVRII-DARRPA-MFVLENVKNLKSHDKGKTFR 241 (482)
T ss_dssp HHSCCCSEEEEECCCCCC------------------CTTTTSHH-HHHHHHH-HHHCCS-EEEEEEETTTTTGGGGHHHH
T ss_pred hcCCCCCEEEecCCCcchhhhCcccccccccccccccCccccHH-HHHHHHH-HHcCCc-EEEEeCcHHHhcccCCcHHH
Confidence 0113589888876522 221111 111122 2444433 456785 44454 13335677
Q ss_pred HHHHHHHHcCCce
Q 014711 356 RMKQQFLEYGKGK 368 (420)
Q Consensus 356 ~~~~~l~~~g~~~ 368 (420)
.+++.|++.|+..
T Consensus 242 ~i~~~L~~lGY~v 254 (482)
T 3me5_A 242 IIMQTLDELGYDV 254 (482)
T ss_dssp HHHHHHHHTTEEE
T ss_pred HHHHHHhcCCcEE
Confidence 8899999988654
No 368
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=84.94 E-value=2.5 Score=40.53 Aligned_cols=95 Identities=11% Similarity=0.058 Sum_probs=61.8
Q ss_pred CCCEEEEEcC--CccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEc--ChhhhhhhhhccCCCeEe
Q 014711 230 AQPLVVDIGS--GNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIAT--NATSTFRSIVASYPGKLI 305 (420)
Q Consensus 230 ~~~~vLDIGc--G~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~--Da~~~~~~~~~~~~~~~d 305 (420)
.+..+|-+|+ |.|..++.+++.. ..++++++.+++.++.+++ .|...+ +-.. |..+.+.+.. ....+|
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~-G~~Vi~~~~~~~~~~~~~~----~ga~~~-~d~~~~~~~~~~~~~~--~~~~~d 237 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLF-GARVIATAGSEDKLRRAKA----LGADET-VNYTHPDWPKEVRRLT--GGKGAD 237 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH----HTCSEE-EETTSTTHHHHHHHHT--TTTCEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHh----cCCCEE-EcCCcccHHHHHHHHh--CCCCce
Confidence 4688999998 6788888888876 5699999999998887753 344322 1111 1111112221 134689
Q ss_pred EEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 306 LVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 306 ~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
.++-.-. + ..+..+.+.|+++|++.+.
T Consensus 238 ~vi~~~g-~--------------~~~~~~~~~l~~~G~~v~~ 264 (343)
T 2eih_A 238 KVVDHTG-A--------------LYFEGVIKATANGGRIAIA 264 (343)
T ss_dssp EEEESSC-S--------------SSHHHHHHHEEEEEEEEES
T ss_pred EEEECCC-H--------------HHHHHHHHhhccCCEEEEE
Confidence 8866532 2 2456677899999998764
No 369
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=84.90 E-value=1.6 Score=41.83 Aligned_cols=95 Identities=8% Similarity=0.002 Sum_probs=60.5
Q ss_pred CCCEEEEEcCC--ccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEE--cChhhhhhhhhccCCCeEe
Q 014711 230 AQPLVVDIGSG--NGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIA--TNATSTFRSIVASYPGKLI 305 (420)
Q Consensus 230 ~~~~vLDIGcG--~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~--~Da~~~~~~~~~~~~~~~d 305 (420)
.+..||=+|+| .|..++.+|+.. +.+++++|.+++.++.+++ .|... .+-. .|..+.+.+.. ....+|
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~----lga~~-~~~~~~~~~~~~~~~~~--~~~g~D 215 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQIL-NFRLIAVTRNNKHTEELLR----LGAAY-VIDTSTAPLYETVMELT--NGIGAD 215 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHH----HTCSE-EEETTTSCHHHHHHHHT--TTSCEE
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHh----CCCcE-EEeCCcccHHHHHHHHh--CCCCCc
Confidence 46889999987 688888888876 5699999999988877765 34332 1211 12222212222 234689
Q ss_pred EEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 306 LVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 306 ~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
.++-.-.. ..+....+.|+++|++++.
T Consensus 216 vvid~~g~---------------~~~~~~~~~l~~~G~iv~~ 242 (340)
T 3gms_A 216 AAIDSIGG---------------PDGNELAFSLRPNGHFLTI 242 (340)
T ss_dssp EEEESSCH---------------HHHHHHHHTEEEEEEEEEC
T ss_pred EEEECCCC---------------hhHHHHHHHhcCCCEEEEE
Confidence 88654211 2233445899999999875
No 370
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=84.58 E-value=2.9 Score=41.04 Aligned_cols=112 Identities=16% Similarity=0.242 Sum_probs=76.3
Q ss_pred CCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCc--EEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITN--GYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~n--v~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
+..||.|+.+.|..+..++... ++.+.=|--.-..++.|+.++++.+ +++...-. . ....+|.+.
T Consensus 39 ~~~~~~~~d~~gal~~~~~~~~----~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~--------~~~~~~~v~ 105 (375)
T 4dcm_A 39 RGPVLILNDAFGALSCALAEHK----PYSIGDSYISELATRENLRLNGIDESSVKFLDSTA-D--------YPQQPGVVL 105 (375)
T ss_dssp CSCEEEECCSSSHHHHHTGGGC----CEEEESCHHHHHHHHHHHHHTTCCGGGSEEEETTS-C--------CCSSCSEEE
T ss_pred CCCEEEECCCCCHHHHhhccCC----ceEEEhHHHHHHHHHHHHHHcCCCccceEeccccc-c--------cccCCCEEE
Confidence 3569999999999999988653 3445436666667788888888864 56543211 1 356789998
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHHHHHHHHHHHHc
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEY 364 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~~~~~~~~l~~~ 364 (420)
+..|.. +..+ ...|..+...|+||+.+++..++......+.+.|++.
T Consensus 106 ~~lpk~-------~~~l--~~~L~~l~~~l~~~~~i~~~g~~~~~~~~~~~~l~~~ 152 (375)
T 4dcm_A 106 IKVPKT-------LALL--EQQLRALRKVVTSDTRIIAGAKARDIHTSTLELFEKV 152 (375)
T ss_dssp EECCSC-------HHHH--HHHHHHHHTTCCTTSEEEEEEEGGGCCHHHHHHHHHH
T ss_pred EEcCCC-------HHHH--HHHHHHHHhhCCCCCEEEEEecccchHHHHHHHHHhh
Confidence 875432 1122 3678899999999999988766554445566666654
No 371
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=84.28 E-value=2.6 Score=40.34 Aligned_cols=95 Identities=13% Similarity=0.143 Sum_probs=61.9
Q ss_pred CCCEEEEEcC--CccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEc---ChhhhhhhhhccCCCeE
Q 014711 230 AQPLVVDIGS--GNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIAT---NATSTFRSIVASYPGKL 304 (420)
Q Consensus 230 ~~~~vLDIGc--G~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~---Da~~~~~~~~~~~~~~~ 304 (420)
.+..||-+|+ |.|..++.+++.. +.++++++.+++.++.+++. .|... .+-.. |..+.+... ....+
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~~~-G~~V~~~~~~~~~~~~~~~~---~g~~~-~~d~~~~~~~~~~~~~~---~~~~~ 226 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAKMM-GCYVVGSAGSKEKVDLLKTK---FGFDD-AFNYKEESDLTAALKRC---FPNGI 226 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT---SCCSE-EEETTSCSCSHHHHHHH---CTTCE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHH---cCCce-EEecCCHHHHHHHHHHH---hCCCC
Confidence 4688999998 6788888888875 56999999999887776532 34332 12111 222222221 13468
Q ss_pred eEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 305 ILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 305 d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
|.++-+.. ...+....+.|+++|++.+.
T Consensus 227 d~vi~~~g---------------~~~~~~~~~~l~~~G~~v~~ 254 (345)
T 2j3h_A 227 DIYFENVG---------------GKMLDAVLVNMNMHGRIAVC 254 (345)
T ss_dssp EEEEESSC---------------HHHHHHHHTTEEEEEEEEEC
T ss_pred cEEEECCC---------------HHHHHHHHHHHhcCCEEEEE
Confidence 88865411 14677888999999998764
No 372
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=83.44 E-value=2.8 Score=40.22 Aligned_cols=73 Identities=8% Similarity=-0.003 Sum_probs=48.7
Q ss_pred CCEEEEEcCCc-cH-HHHHHHHhCCCCeEEE-EeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEE
Q 014711 231 QPLVVDIGSGN-GL-FLLGMARKRKDLNFLG-LEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILV 307 (420)
Q Consensus 231 ~~~vLDIGcG~-G~-~~~~lA~~~P~~~viG-iDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i 307 (420)
.-++-=||||. |. ..+...+..|+..+++ +|.+++.. ++.+++.+..+ ...|..+++ .+..+|.|
T Consensus 23 mirigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a---~~~a~~~g~~~---~y~d~~ell------~~~~iDaV 90 (350)
T 4had_A 23 MLRFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRA---REMADRFSVPH---AFGSYEEML------ASDVIDAV 90 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHH---HHHHHHHTCSE---EESSHHHHH------HCSSCSEE
T ss_pred ccEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHH---HHHHHHcCCCe---eeCCHHHHh------cCCCCCEE
Confidence 34677899986 53 3344556689999987 48887654 44455566543 356777764 35679999
Q ss_pred EEeCCCCC
Q 014711 308 SIQCPNPD 315 (420)
Q Consensus 308 ~~~fpdp~ 315 (420)
++.-|+.+
T Consensus 91 ~I~tP~~~ 98 (350)
T 4had_A 91 YIPLPTSQ 98 (350)
T ss_dssp EECSCGGG
T ss_pred EEeCCCch
Confidence 99866554
No 373
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=83.35 E-value=16 Score=29.15 Aligned_cols=111 Identities=10% Similarity=0.112 Sum_probs=62.0
Q ss_pred CEEEEEcCCccHHHHHHHHh--CCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 232 PLVVDIGSGNGLFLLGMARK--RKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 232 ~~vLDIGcG~G~~~~~lA~~--~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
..|+=+|| |.++..+++. ..+..++.+|.+++.++..++. . ++.++.+|..+. ..+....-...|.|++
T Consensus 5 m~i~IiG~--G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~---~---~~~~~~~d~~~~-~~l~~~~~~~~d~vi~ 75 (140)
T 1lss_A 5 MYIIIAGI--GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE---I---DALVINGDCTKI-KTLEDAGIEDADMYIA 75 (140)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---C---SSEEEESCTTSH-HHHHHTTTTTCSEEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh---c---CcEEEEcCCCCH-HHHHHcCcccCCEEEE
Confidence 45777777 5555555443 2357899999998876554332 1 245667776543 1111001235788887
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHHHHHHHHHHHHcCCc
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKG 367 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~~~~~~~~l~~~g~~ 367 (420)
..|++. . ...+..+.+.+.++ .++..+....+. +.+++.|..
T Consensus 76 ~~~~~~----------~-~~~~~~~~~~~~~~-~ii~~~~~~~~~----~~l~~~g~~ 117 (140)
T 1lss_A 76 VTGKEE----------V-NLMSSLLAKSYGIN-KTIARISEIEYK----DVFERLGVD 117 (140)
T ss_dssp CCSCHH----------H-HHHHHHHHHHTTCC-CEEEECSSTTHH----HHHHHTTCS
T ss_pred eeCCch----------H-HHHHHHHHHHcCCC-EEEEEecCHhHH----HHHHHcCCC
Confidence 654431 1 13445556667775 555556555542 345666754
No 374
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=83.10 E-value=3.7 Score=39.36 Aligned_cols=95 Identities=12% Similarity=0.097 Sum_probs=60.5
Q ss_pred CCCEEEEE-cCC-ccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEE
Q 014711 230 AQPLVVDI-GSG-NGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILV 307 (420)
Q Consensus 230 ~~~~vLDI-GcG-~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i 307 (420)
.+..||=+ |+| .|..++.+|+.. ..++++++.+++.++.+++ .|...+--...|..+.+.+. ....+|.+
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~----lGa~~vi~~~~~~~~~~~~~---~~~g~Dvv 221 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAY-GLRVITTASRNETIEWTKK----MGADIVLNHKESLLNQFKTQ---GIELVDYV 221 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEECCSHHHHHHHHH----HTCSEEECTTSCHHHHHHHH---TCCCEEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHh----cCCcEEEECCccHHHHHHHh---CCCCccEE
Confidence 36788888 454 477888888875 5699999999988877765 34432211111222221221 24568988
Q ss_pred EEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEE
Q 014711 308 SIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFL 346 (420)
Q Consensus 308 ~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~ 346 (420)
+-... .+..+..+.++|+++|+++.
T Consensus 222 ~d~~g--------------~~~~~~~~~~~l~~~G~iv~ 246 (346)
T 3fbg_A 222 FCTFN--------------TDMYYDDMIQLVKPRGHIAT 246 (346)
T ss_dssp EESSC--------------HHHHHHHHHHHEEEEEEEEE
T ss_pred EECCC--------------chHHHHHHHHHhccCCEEEE
Confidence 65421 12567888999999999965
No 375
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=82.47 E-value=5.3 Score=38.06 Aligned_cols=97 Identities=14% Similarity=0.128 Sum_probs=61.0
Q ss_pred CCCEEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEE--cChhhhhhhhhccCCCeEeE
Q 014711 230 AQPLVVDIGSGN-GLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIA--TNATSTFRSIVASYPGKLIL 306 (420)
Q Consensus 230 ~~~~vLDIGcG~-G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~--~Da~~~~~~~~~~~~~~~d~ 306 (420)
.+..||=.|+|. |.+++.+|+..-...++++|.+++.++.+++ .|... .+-. .|..+.....- ....+|.
T Consensus 160 ~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~----lGa~~-~i~~~~~~~~~~~~~~~--~~~g~d~ 232 (346)
T 4a2c_A 160 ENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKS----FGAMQ-TFNSSEMSAPQMQSVLR--ELRFNQL 232 (346)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTCSE-EEETTTSCHHHHHHHHG--GGCSSEE
T ss_pred CCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHH----cCCeE-EEeCCCCCHHHHHHhhc--ccCCccc
Confidence 467888899975 5556777887766678999999998877754 45432 1111 22222211111 1234666
Q ss_pred EEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 307 VSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 307 i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
++-.... +..++...+.|++||++.+.
T Consensus 233 v~d~~G~--------------~~~~~~~~~~l~~~G~~v~~ 259 (346)
T 4a2c_A 233 ILETAGV--------------PQTVELAVEIAGPHAQLALV 259 (346)
T ss_dssp EEECSCS--------------HHHHHHHHHHCCTTCEEEEC
T ss_pred ccccccc--------------cchhhhhhheecCCeEEEEE
Confidence 6543211 36788889999999999874
No 376
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=82.45 E-value=6.9 Score=32.52 Aligned_cols=114 Identities=9% Similarity=0.007 Sum_probs=67.1
Q ss_pred CEEEEEcCCccHHHHHHHHhC--CCCeEEEEeCC-hHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 232 PLVVDIGSGNGLFLLGMARKR--KDLNFLGLEVN-GKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 232 ~~vLDIGcG~G~~~~~lA~~~--P~~~viGiDis-~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
..++=+|| |.++..+++.. -+..|+.+|.+ ++.++...+.. ..++.++.+|+.+.. .+-...-...|.++
T Consensus 4 ~~vlI~G~--G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~----~~~~~~i~gd~~~~~-~l~~a~i~~ad~vi 76 (153)
T 1id1_A 4 DHFIVCGH--SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL----GDNADVIPGDSNDSS-VLKKAGIDRCRAIL 76 (153)
T ss_dssp SCEEEECC--SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH----CTTCEEEESCTTSHH-HHHHHTTTTCSEEE
T ss_pred CcEEEECC--CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh----cCCCeEEEcCCCCHH-HHHHcChhhCCEEE
Confidence 34555665 77777766552 35789999997 45444333221 124788999987531 11000124578887
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHHHHHHHHHHHHcCCc
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKG 367 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~~~~~~~~l~~~g~~ 367 (420)
+..++.. . ...+....+.+.|...++...+++.+.+ .++..|..
T Consensus 77 ~~~~~d~----------~-n~~~~~~a~~~~~~~~ii~~~~~~~~~~----~l~~~G~~ 120 (153)
T 1id1_A 77 ALSDNDA----------D-NAFVVLSAKDMSSDVKTVLAVSDSKNLN----KIKMVHPD 120 (153)
T ss_dssp ECSSCHH----------H-HHHHHHHHHHHTSSSCEEEECSSGGGHH----HHHTTCCS
T ss_pred EecCChH----------H-HHHHHHHHHHHCCCCEEEEEECCHHHHH----HHHHcCCC
Confidence 7644421 1 2455666777888888888877766533 34566654
No 377
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=82.35 E-value=0.24 Score=60.44 Aligned_cols=102 Identities=15% Similarity=0.104 Sum_probs=48.9
Q ss_pred CCEEEEEcCCccHHHHHHHHhC---C--CCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEe
Q 014711 231 QPLVVDIGSGNGLFLLGMARKR---K--DLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLI 305 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~~---P--~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d 305 (420)
..+|||||.|+|..+..+.+.. | ...|+-.|+|+...+.|+++..... +..-.-|..+. .-+ .+.++|
T Consensus 1241 ~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~d---i~~~~~d~~~~--~~~--~~~~yd 1313 (2512)
T 2vz8_A 1241 KMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLH---VTQGQWDPANP--APG--SLGKAD 1313 (2512)
T ss_dssp EEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHT---EEEECCCSSCC--CC-------CC
T ss_pred CceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcc---ccccccccccc--ccC--CCCcee
Confidence 3589999999998776655442 2 2468889999988877777654421 22211122110 000 245689
Q ss_pred EEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 306 LVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 306 ~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
.|+.. +..+..+.. ...|..+.+.|||||++++.
T Consensus 1314 lvia~--~vl~~t~~~------~~~l~~~~~lL~p~G~l~~~ 1347 (2512)
T 2vz8_A 1314 LLVCN--CALATLGDP------AVAVGNMAATLKEGGFLLLH 1347 (2512)
T ss_dssp EEEEE--CC--------------------------CCEEEEE
T ss_pred EEEEc--ccccccccH------HHHHHHHHHhcCCCcEEEEE
Confidence 98765 332211111 25788899999999998875
No 378
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=82.28 E-value=3 Score=40.03 Aligned_cols=94 Identities=12% Similarity=0.141 Sum_probs=61.5
Q ss_pred CCCEEEEEcC--CccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcC--hhhhhhhhhccCCCeEe
Q 014711 230 AQPLVVDIGS--GNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATN--ATSTFRSIVASYPGKLI 305 (420)
Q Consensus 230 ~~~~vLDIGc--G~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~D--a~~~~~~~~~~~~~~~d 305 (420)
.+..||=+|+ |.|..++.+|+.. +.++++++.+++.++.+++ .|...+ +..+ ..+.+.+.. ....+|
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~----~ga~~v--~~~~~~~~~~v~~~~--~~~g~D 229 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAKGM-GAKVIAVVNRTAATEFVKS----VGADIV--LPLEEGWAKAVREAT--GGAGVD 229 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHH----HTCSEE--EESSTTHHHHHHHHT--TTSCEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHh----cCCcEE--ecCchhHHHHHHHHh--CCCCce
Confidence 4688999997 5688888888876 5699999999988877655 344322 2222 222222222 233689
Q ss_pred EEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 306 LVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 306 ~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
.++-.-.. ..+....+.|+++|++++.
T Consensus 230 vvid~~g~---------------~~~~~~~~~l~~~G~iv~~ 256 (342)
T 4eye_A 230 MVVDPIGG---------------PAFDDAVRTLASEGRLLVV 256 (342)
T ss_dssp EEEESCC-----------------CHHHHHHTEEEEEEEEEC
T ss_pred EEEECCch---------------hHHHHHHHhhcCCCEEEEE
Confidence 88654222 2456678899999999874
No 379
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=82.13 E-value=10 Score=37.81 Aligned_cols=78 Identities=13% Similarity=0.145 Sum_probs=48.5
Q ss_pred CEEEEEcCCc-cHHHHHHHHhCCCCeEEE-EeCChHHHHHHHHHhHHhCCCcEEEEEc---ChhhhhhhhhccCCCeEeE
Q 014711 232 PLVVDIGSGN-GLFLLGMARKRKDLNFLG-LEVNGKLVTHCRDSLQLSGITNGYFIAT---NATSTFRSIVASYPGKLIL 306 (420)
Q Consensus 232 ~~vLDIGcG~-G~~~~~lA~~~P~~~viG-iDis~~~i~~A~~~~~~~~l~nv~~~~~---Da~~~~~~~~~~~~~~~d~ 306 (420)
.+|.=||||. |..-+......|+..+++ +|.+++..+.+.+.+.+.+++.+..... |..+++ .+..+|.
T Consensus 21 ~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~ll------~~~~vD~ 94 (444)
T 2ixa_A 21 VRIAFIAVGLRGQTHVENMARRDDVEIVAFADPDPYMVGRAQEILKKNGKKPAKVFGNGNDDYKNML------KDKNIDA 94 (444)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSCHHHHHHHHHHHHHTTCCCCEEECSSTTTHHHHT------TCTTCCE
T ss_pred ceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHHHhcCCCCCceeccCCCCHHHHh------cCCCCCE
Confidence 4678889983 222223333468887765 4999988877766655556544444432 555553 3456999
Q ss_pred EEEeCCCCC
Q 014711 307 VSIQCPNPD 315 (420)
Q Consensus 307 i~~~fpdp~ 315 (420)
|++.-|+.+
T Consensus 95 V~i~tp~~~ 103 (444)
T 2ixa_A 95 VFVSSPWEW 103 (444)
T ss_dssp EEECCCGGG
T ss_pred EEEcCCcHH
Confidence 999755543
No 380
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=81.79 E-value=3.8 Score=40.32 Aligned_cols=97 Identities=13% Similarity=0.102 Sum_probs=59.8
Q ss_pred CCCEEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEE---cChhhhhhhhhccCCCeEe
Q 014711 230 AQPLVVDIGSGN-GLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIA---TNATSTFRSIVASYPGKLI 305 (420)
Q Consensus 230 ~~~~vLDIGcG~-G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~---~Da~~~~~~~~~~~~~~~d 305 (420)
.+..||=+|+|. |..++.+|+......|+++|.+++.++.+++ .|... ++. .|..+.+.+.. ....+|
T Consensus 213 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~----lGa~~--vi~~~~~~~~~~i~~~t--~g~g~D 284 (404)
T 3ip1_A 213 PGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKE----LGADH--VIDPTKENFVEAVLDYT--NGLGAK 284 (404)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHH----HTCSE--EECTTTSCHHHHHHHHT--TTCCCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----cCCCE--EEcCCCCCHHHHHHHHh--CCCCCC
Confidence 367788899876 7778888988644499999999998887754 34332 222 12222222221 233688
Q ss_pred EEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhc----cCCeEEEEE
Q 014711 306 LVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLL----VHDGKVFLQ 347 (420)
Q Consensus 306 ~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~L----kpgG~l~~~ 347 (420)
.++-.-..+ ...+..+.+.| +++|++.+.
T Consensus 285 ~vid~~g~~-------------~~~~~~~~~~l~~~~~~~G~iv~~ 317 (404)
T 3ip1_A 285 LFLEATGVP-------------QLVWPQIEEVIWRARGINATVAIV 317 (404)
T ss_dssp EEEECSSCH-------------HHHHHHHHHHHHHCSCCCCEEEEC
T ss_pred EEEECCCCc-------------HHHHHHHHHHHHhccCCCcEEEEe
Confidence 886542222 02445555555 999999874
No 381
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=81.73 E-value=4.6 Score=38.60 Aligned_cols=93 Identities=13% Similarity=0.216 Sum_probs=61.0
Q ss_pred CCCEEEEEcCC-ccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEc---ChhhhhhhhhccCCCeEe
Q 014711 230 AQPLVVDIGSG-NGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIAT---NATSTFRSIVASYPGKLI 305 (420)
Q Consensus 230 ~~~~vLDIGcG-~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~---Da~~~~~~~~~~~~~~~d 305 (420)
.+..||-+|+| .|..++.+|+.. ..+++++|.+++.++.+++ .|...+ +.. |..+.+.+. . ..+|
T Consensus 164 ~g~~VlV~GaG~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~----lGa~~~--~d~~~~~~~~~~~~~---~-~~~d 232 (339)
T 1rjw_A 164 PGEWVAIYGIGGLGHVAVQYAKAM-GLNVVAVDIGDEKLELAKE----LGADLV--VNPLKEDAAKFMKEK---V-GGVH 232 (339)
T ss_dssp TTCEEEEECCSTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHH----TTCSEE--ECTTTSCHHHHHHHH---H-SSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH----CCCCEE--ecCCCccHHHHHHHH---h-CCCC
Confidence 46789999996 477888888876 5699999999998887753 454321 111 111111111 1 3688
Q ss_pred EEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 306 LVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 306 ~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
.++-.... +..++...+.|+++|++.+.
T Consensus 233 ~vid~~g~--------------~~~~~~~~~~l~~~G~~v~~ 260 (339)
T 1rjw_A 233 AAVVTAVS--------------KPAFQSAYNSIRRGGACVLV 260 (339)
T ss_dssp EEEESSCC--------------HHHHHHHHHHEEEEEEEEEC
T ss_pred EEEECCCC--------------HHHHHHHHHHhhcCCEEEEe
Confidence 88654221 25678888999999998764
No 382
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=80.81 E-value=5.7 Score=38.23 Aligned_cols=95 Identities=20% Similarity=0.186 Sum_probs=60.0
Q ss_pred CCCEEEEEcC--CccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcC--hhhhhhhhhccCCCeEe
Q 014711 230 AQPLVVDIGS--GNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATN--ATSTFRSIVASYPGKLI 305 (420)
Q Consensus 230 ~~~~vLDIGc--G~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~D--a~~~~~~~~~~~~~~~d 305 (420)
.+..||-.|+ |.|..++.+++.. +.++++++.+++.++.+++ .|... .+-..+ ..+.+.+.. ....+|
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~----~ga~~-~~d~~~~~~~~~~~~~~--~~~~~D 241 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIARAY-GLKILGTAGTEEGQKIVLQ----NGAHE-VFNHREVNYIDKIKKYV--GEKGID 241 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH----TTCSE-EEETTSTTHHHHHHHHH--CTTCEE
T ss_pred CcCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCChhHHHHHHH----cCCCE-EEeCCCchHHHHHHHHc--CCCCcE
Confidence 4678999997 5677888888875 5799999999988776543 34332 111111 111111222 234688
Q ss_pred EEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 306 LVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 306 ~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
.++-+. ....+....++|+++|++.+.
T Consensus 242 ~vi~~~---------------G~~~~~~~~~~l~~~G~iv~~ 268 (351)
T 1yb5_A 242 IIIEML---------------ANVNLSKDLSLLSHGGRVIVV 268 (351)
T ss_dssp EEEESC---------------HHHHHHHHHHHEEEEEEEEEC
T ss_pred EEEECC---------------ChHHHHHHHHhccCCCEEEEE
Confidence 886541 113567778999999998764
No 383
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=80.61 E-value=11 Score=35.83 Aligned_cols=107 Identities=9% Similarity=0.021 Sum_probs=63.4
Q ss_pred EEEEEcCCc-cHHHHHHHHhCCCCeEEE-EeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEEe
Q 014711 233 LVVDIGSGN-GLFLLGMARKRKDLNFLG-LEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQ 310 (420)
Q Consensus 233 ~vLDIGcG~-G~~~~~lA~~~P~~~viG-iDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~~ 310 (420)
+|.=||||. |...+....+.|+..+++ +|.+++..+... .+.+. . ..|..+++ .+..+|.|++.
T Consensus 5 ~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~---~~~~~---~--~~~~~~~l------~~~~~D~V~i~ 70 (331)
T 4hkt_A 5 RFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIA---GAYGC---E--VRTIDAIE------AAADIDAVVIC 70 (331)
T ss_dssp EEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHH---HHTTC---E--ECCHHHHH------HCTTCCEEEEC
T ss_pred EEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHH---HHhCC---C--cCCHHHHh------cCCCCCEEEEe
Confidence 467789986 444444444568888886 799887654433 33443 3 56666654 24468999887
Q ss_pred CCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE---eCcHHHHHHHHHHHHHcCCc
Q 014711 311 CPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ---SDIEEVMLRMKQQFLEYGKG 367 (420)
Q Consensus 311 fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~---td~~~~~~~~~~~l~~~g~~ 367 (420)
-|+.+ -.+.+..+|+.|-.++++ +......+++.+..++.+..
T Consensus 71 tp~~~--------------h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~ 116 (331)
T 4hkt_A 71 TPTDT--------------HADLIERFARAGKAIFCEKPIDLDAERVRACLKVVSDTKAK 116 (331)
T ss_dssp SCGGG--------------HHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCC
T ss_pred CCchh--------------HHHHHHHHHHcCCcEEEecCCCCCHHHHHHHHHHHHHcCCe
Confidence 55543 122334456666556553 23344456666766776644
No 384
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=80.49 E-value=4 Score=39.31 Aligned_cols=92 Identities=11% Similarity=0.056 Sum_probs=58.6
Q ss_pred CEEEEEcCCc-cHHH-HHHH-HhCCCCe-EEEEeCChH---HHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeE
Q 014711 232 PLVVDIGSGN-GLFL-LGMA-RKRKDLN-FLGLEVNGK---LVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKL 304 (420)
Q Consensus 232 ~~vLDIGcG~-G~~~-~~lA-~~~P~~~-viGiDis~~---~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~ 304 (420)
..||=+|+|. |.++ +.+| +.. ..+ |+++|.+++ .++.+++ .|...+.....|..+ +.+. .+.+
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~-Ga~~Vi~~~~~~~~~~~~~~~~~----lGa~~v~~~~~~~~~-i~~~----~gg~ 243 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDK-GYENLYCLGRRDRPDPTIDIIEE----LDATYVDSRQTPVED-VPDV----YEQM 243 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTT-CCCEEEEEECCCSSCHHHHHHHH----TTCEEEETTTSCGGG-HHHH----SCCE
T ss_pred CEEEEECCCHHHHHHHHHHHHHHc-CCcEEEEEeCCcccHHHHHHHHH----cCCcccCCCccCHHH-HHHh----CCCC
Confidence 7899999864 7777 8888 765 455 999999987 7776643 454322000112222 2221 1268
Q ss_pred eEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 305 ILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 305 d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
|.++-.... +..++...+.|+++|++.+.
T Consensus 244 Dvvid~~g~--------------~~~~~~~~~~l~~~G~iv~~ 272 (357)
T 2b5w_A 244 DFIYEATGF--------------PKHAIQSVQALAPNGVGALL 272 (357)
T ss_dssp EEEEECSCC--------------HHHHHHHHHHEEEEEEEEEC
T ss_pred CEEEECCCC--------------hHHHHHHHHHHhcCCEEEEE
Confidence 888654221 24678889999999998864
No 385
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=80.25 E-value=3.9 Score=38.95 Aligned_cols=95 Identities=12% Similarity=0.130 Sum_probs=61.8
Q ss_pred CCCEEEEEcC--CccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEc--ChhhhhhhhhccCCCeEe
Q 014711 230 AQPLVVDIGS--GNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIAT--NATSTFRSIVASYPGKLI 305 (420)
Q Consensus 230 ~~~~vLDIGc--G~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~--Da~~~~~~~~~~~~~~~d 305 (420)
.+..||-+|+ |.|..++.+++.. ..+|++++.+++.++.+.+. .|... .+-.. |..+.+.+. ....+|
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~---~g~~~-~~~~~~~~~~~~~~~~---~~~~~d 220 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIARLK-GCRVVGIAGGAEKCRFLVEE---LGFDG-AIDYKNEDLAAGLKRE---CPKGID 220 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT---TCCSE-EEETTTSCHHHHHHHH---CTTCEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHH---cCCCE-EEECCCHHHHHHHHHh---cCCCce
Confidence 4788999998 5688888888875 56999999999887766332 34322 12111 222211111 234688
Q ss_pred EEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 306 LVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 306 ~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
.++-+-. ...+....+.|+++|++++.
T Consensus 221 ~vi~~~g---------------~~~~~~~~~~l~~~G~iv~~ 247 (336)
T 4b7c_A 221 VFFDNVG---------------GEILDTVLTRIAFKARIVLC 247 (336)
T ss_dssp EEEESSC---------------HHHHHHHHTTEEEEEEEEEC
T ss_pred EEEECCC---------------cchHHHHHHHHhhCCEEEEE
Confidence 8765411 14678888999999999874
No 386
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=79.57 E-value=2.8 Score=41.53 Aligned_cols=58 Identities=21% Similarity=0.251 Sum_probs=39.0
Q ss_pred cCCCCCCEEEEEcCCccHHHHHHHHh---C----CCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEE
Q 014711 226 YHDPAQPLVVDIGSGNGLFLLGMARK---R----KDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFI 285 (420)
Q Consensus 226 f~~~~~~~vLDIGcG~G~~~~~lA~~---~----P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~ 285 (420)
.+.+..-.++|+|.|+|.++..+.+. . ....|+-||+|+...+.=++++... .++++.
T Consensus 76 ~g~p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~~--~~v~W~ 140 (387)
T 1zkd_A 76 ADEPQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAGI--RNIHWH 140 (387)
T ss_dssp TTCCSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTTC--SSEEEE
T ss_pred cCCCCCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcCC--CCeEEe
Confidence 34444456999999999998887653 2 3458999999998776444443322 245544
No 387
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=79.31 E-value=2.2 Score=41.27 Aligned_cols=92 Identities=11% Similarity=0.027 Sum_probs=58.6
Q ss_pred CCCEEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChh-hhhhhhhccCCCeEeEE
Q 014711 230 AQPLVVDIGSGN-GLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNAT-STFRSIVASYPGKLILV 307 (420)
Q Consensus 230 ~~~~vLDIGcG~-G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~-~~~~~~~~~~~~~~d~i 307 (420)
.+..||-+|+|. |..++.+|+.. +.+|+++|.+++.++.+++ .|...+ +..+-. ++.. .+ .+.+|.+
T Consensus 179 ~g~~VlV~GaG~vG~~~~qlak~~-Ga~Vi~~~~~~~~~~~~~~----lGa~~v--~~~~~~~~~~~-~~---~~~~D~v 247 (360)
T 1piw_A 179 PGKKVGIVGLGGIGSMGTLISKAM-GAETYVISRSSRKREDAMK----MGADHY--IATLEEGDWGE-KY---FDTFDLI 247 (360)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHH----HTCSEE--EEGGGTSCHHH-HS---CSCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHH----cCCCEE--EcCcCchHHHH-Hh---hcCCCEE
Confidence 468899999865 77888888875 5689999999988877754 454322 221111 2211 11 2468988
Q ss_pred EEeCCC--CCCCCcchhhhhhHHHHHHHHHhhccCCeEEEE
Q 014711 308 SIQCPN--PDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFL 346 (420)
Q Consensus 308 ~~~fpd--p~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~ 346 (420)
+-.... + ..++...+.|+++|++.+
T Consensus 248 id~~g~~~~--------------~~~~~~~~~l~~~G~iv~ 274 (360)
T 1piw_A 248 VVCASSLTD--------------IDFNIMPKAMKVGGRIVS 274 (360)
T ss_dssp EECCSCSTT--------------CCTTTGGGGEEEEEEEEE
T ss_pred EECCCCCcH--------------HHHHHHHHHhcCCCEEEE
Confidence 765433 2 123445678899998875
No 388
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=79.21 E-value=13 Score=33.23 Aligned_cols=100 Identities=12% Similarity=0.033 Sum_probs=63.0
Q ss_pred CEEEEEcCCccHHHHHHHHhCC--CCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 232 PLVVDIGSGNGLFLLGMARKRK--DLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 232 ~~vLDIGcG~G~~~~~lA~~~P--~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
..++=+|| |.++..+++..- +. |+++|.+++.++.++ .++.++.+|+.+. ..+-...-...|.+++
T Consensus 10 ~~viI~G~--G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~--------~~~~~i~gd~~~~-~~l~~a~i~~ad~vi~ 77 (234)
T 2aef_A 10 RHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKKVLR--------SGANFVHGDPTRV-SDLEKANVRGARAVIV 77 (234)
T ss_dssp CEEEEESC--CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH--------TTCEEEESCTTCH-HHHHHTTCTTCSEEEE
T ss_pred CEEEEECC--ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh--------cCCeEEEcCCCCH-HHHHhcCcchhcEEEE
Confidence 45777776 678888877743 34 999999998765443 2478899999754 1110001245788877
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHHH
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVM 354 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~~ 354 (420)
..++.. . ...+....+.+.|+..++.....+.+.
T Consensus 78 ~~~~d~----------~-n~~~~~~a~~~~~~~~iia~~~~~~~~ 111 (234)
T 2aef_A 78 DLESDS----------E-TIHCILGIRKIDESVRIIAEAERYENI 111 (234)
T ss_dssp CCSCHH----------H-HHHHHHHHHHHCSSSEEEEECSSGGGH
T ss_pred cCCCcH----------H-HHHHHHHHHHHCCCCeEEEEECCHhHH
Confidence 654431 1 134455677788887888777655543
No 389
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=78.13 E-value=10 Score=35.97 Aligned_cols=99 Identities=11% Similarity=0.016 Sum_probs=62.9
Q ss_pred CEEEEEcCCccHHHHHHHHhC--CCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 232 PLVVDIGSGNGLFLLGMARKR--KDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 232 ~~vLDIGcG~G~~~~~lA~~~--P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
..++=+|| |.++..+++.. -+. ++.+|.+++.++ +++ .++.++++|+.+. ..+-...-...|.+.+
T Consensus 116 ~~viI~G~--G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~-------~~~~~i~gd~~~~-~~L~~a~i~~a~~vi~ 183 (336)
T 1lnq_A 116 RHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKK-VLR-------SGANFVHGDPTRV-SDLEKANVRGARAVIV 183 (336)
T ss_dssp CEEEEESC--CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH-------TTCEEEESCTTSH-HHHHHTCSTTEEEEEE
T ss_pred CCEEEECC--cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh-------CCcEEEEeCCCCH-HHHHhcChhhccEEEE
Confidence 35666665 78888888763 245 999999999887 543 2578999999864 1111112346788877
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHH
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEV 353 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~ 353 (420)
..++.. ..-......+.+.|...++.+..++.+
T Consensus 184 ~~~~d~-----------~n~~~~~~ar~~~~~~~iiar~~~~~~ 216 (336)
T 1lnq_A 184 DLESDS-----------ETIHCILGIRKIDESVRIIAEAERYEN 216 (336)
T ss_dssp CCSSHH-----------HHHHHHHHHHTTCTTSEEEEECSSGGG
T ss_pred cCCccH-----------HHHHHHHHHHHHCCCCeEEEEECCHHH
Confidence 644321 013345566777888788877765554
No 390
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=77.79 E-value=4.4 Score=33.95 Aligned_cols=76 Identities=12% Similarity=0.075 Sum_probs=44.3
Q ss_pred ChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCe
Q 014711 263 NGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDG 342 (420)
Q Consensus 263 s~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG 342 (420)
.++.++.++....+. ++-..-+.=+..+-...+..++..||.|++.-|..- ..+++.+.++..+...|||||
T Consensus 21 ~pe~le~~k~~~~~~--~~~~~d~qmlDRLa~G~VsLp~stYD~V~~lt~~~~------~~~~l~r~li~~l~~aLkpgG 92 (136)
T 2km1_A 21 TPELVENTKAQAASK--KVKFVDQFLINKLNDGSITLENAKYETVHYLTPEAQ------TDIKFPKKLISVLADSLKPNG 92 (136)
T ss_dssp SHHHHHHHHHHHHHT--TEEEEEEEEHHHHHHTCCCCCSSSCCSEEEECCCSS------CSCCCCHHHHHHHHTTCCTTC
T ss_pred CHHHHHHHHHhhhcc--ccchhhHHHHHHHhcCcccCCcccccEEEEecCCcc------chhhcCHHHHHHHHHHhCCCC
Confidence 366677776665543 221111111111111223336789999988744331 113344689999999999999
Q ss_pred EEEE
Q 014711 343 KVFL 346 (420)
Q Consensus 343 ~l~~ 346 (420)
.|.-
T Consensus 93 ~L~g 96 (136)
T 2km1_A 93 SLIG 96 (136)
T ss_dssp CEEC
T ss_pred EEEe
Confidence 9986
No 391
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=77.35 E-value=4.4 Score=38.39 Aligned_cols=95 Identities=14% Similarity=0.057 Sum_probs=60.2
Q ss_pred CCCEEEEEc--CCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcC--hhhhhhhhhccCCCeEe
Q 014711 230 AQPLVVDIG--SGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATN--ATSTFRSIVASYPGKLI 305 (420)
Q Consensus 230 ~~~~vLDIG--cG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~D--a~~~~~~~~~~~~~~~d 305 (420)
.+..||-.| .|.|..++.+++.. ..+++++|.+++.++.+++ .+.. ..+-..| ..+.+.+.. ....+|
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~-G~~V~~~~~~~~~~~~~~~----~g~~-~~~~~~~~~~~~~~~~~~--~~~~~D 211 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKAL-GAKLIGTVGTAQKAQSALK----AGAW-QVINYREEDLVERLKEIT--GGKKVR 211 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHH----HTCS-EEEETTTSCHHHHHHHHT--TTCCEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH----cCCC-EEEECCCccHHHHHHHHh--CCCCce
Confidence 467899999 46677888888775 5699999999988777754 3432 1221111 111111111 234688
Q ss_pred EEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 306 LVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 306 ~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
.++-+-. + ..++.+.+.|+++|++.+.
T Consensus 212 ~vi~~~g-~--------------~~~~~~~~~l~~~G~iv~~ 238 (327)
T 1qor_A 212 VVYDSVG-R--------------DTWERSLDCLQRRGLMVSF 238 (327)
T ss_dssp EEEECSC-G--------------GGHHHHHHTEEEEEEEEEC
T ss_pred EEEECCc-h--------------HHHHHHHHHhcCCCEEEEE
Confidence 8865522 1 4567788899999998864
No 392
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=76.77 E-value=6.4 Score=38.03 Aligned_cols=95 Identities=14% Similarity=0.240 Sum_probs=62.0
Q ss_pred CCCEEEEEc--CCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEE--cChhhhhhhhhccCCCeEe
Q 014711 230 AQPLVVDIG--SGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIA--TNATSTFRSIVASYPGKLI 305 (420)
Q Consensus 230 ~~~~vLDIG--cG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~--~Da~~~~~~~~~~~~~~~d 305 (420)
.+..||=+| .|.|..++.+|+.. +.++++++.+++.++.+++ .|...+ +-. .|..+.+... ....+|
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~----~Ga~~~-~~~~~~~~~~~~~~~---~~~g~D 233 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKKA-KCHVIGTCSSDEKSAFLKS----LGCDRP-INYKTEPVGTVLKQE---YPEGVD 233 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH----TTCSEE-EETTTSCHHHHHHHH---CTTCEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHH----cCCcEE-EecCChhHHHHHHHh---cCCCCC
Confidence 467899999 46788889999876 5699999999888777654 444321 111 1222221111 134688
Q ss_pred EEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEe
Q 014711 306 LVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 348 (420)
Q Consensus 306 ~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~t 348 (420)
.++-... ...++.+.+.|+++|++++..
T Consensus 234 ~vid~~g---------------~~~~~~~~~~l~~~G~iv~~g 261 (362)
T 2c0c_A 234 VVYESVG---------------GAMFDLAVDALATKGRLIVIG 261 (362)
T ss_dssp EEEECSC---------------THHHHHHHHHEEEEEEEEECC
T ss_pred EEEECCC---------------HHHHHHHHHHHhcCCEEEEEe
Confidence 8865421 146678889999999988753
No 393
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=76.61 E-value=5.2 Score=38.03 Aligned_cols=95 Identities=11% Similarity=0.062 Sum_probs=60.6
Q ss_pred CCCEEEEEcC--CccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEE--cChhhhhhhhhccCCCeEe
Q 014711 230 AQPLVVDIGS--GNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIA--TNATSTFRSIVASYPGKLI 305 (420)
Q Consensus 230 ~~~~vLDIGc--G~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~--~Da~~~~~~~~~~~~~~~d 305 (420)
.+..||=+|+ |-|..++.+|+.. +.++++++.+++.++.+++ .|... .+-. .|..+.+.+.. ....+|
T Consensus 148 ~g~~vlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~----~ga~~-~~~~~~~~~~~~~~~~~--~~~g~D 219 (334)
T 3qwb_A 148 KGDYVLLFAAAGGVGLILNQLLKMK-GAHTIAVASTDEKLKIAKE----YGAEY-LINASKEDILRQVLKFT--NGKGVD 219 (334)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH----TTCSE-EEETTTSCHHHHHHHHT--TTSCEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH----cCCcE-EEeCCCchHHHHHHHHh--CCCCce
Confidence 4688999994 5677888888875 5699999999988876644 34321 1211 12222212221 234689
Q ss_pred EEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 306 LVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 306 ~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
.++-.-.. ..++...+.|+++|++++.
T Consensus 220 ~vid~~g~---------------~~~~~~~~~l~~~G~iv~~ 246 (334)
T 3qwb_A 220 ASFDSVGK---------------DTFEISLAALKRKGVFVSF 246 (334)
T ss_dssp EEEECCGG---------------GGHHHHHHHEEEEEEEEEC
T ss_pred EEEECCCh---------------HHHHHHHHHhccCCEEEEE
Confidence 88654211 3567778899999998874
No 394
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=75.99 E-value=24 Score=33.73 Aligned_cols=109 Identities=12% Similarity=-0.045 Sum_probs=63.5
Q ss_pred CEEEEEcCCc-cH-HHHHHHHhCCCCeEEEE-eCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 232 PLVVDIGSGN-GL-FLLGMARKRKDLNFLGL-EVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 232 ~~vLDIGcG~-G~-~~~~lA~~~P~~~viGi-Dis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
.+|.=||||. |. ..+...+..|+..++++ |.+++..+. .+++.+.+ .. .|..+++ .+..+|.|+
T Consensus 28 ~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~---~a~~~g~~---~~-~~~~~ll------~~~~~D~V~ 94 (350)
T 3rc1_A 28 IRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKR---FTERFGGE---PV-EGYPALL------ERDDVDAVY 94 (350)
T ss_dssp EEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHH---HHHHHCSE---EE-ESHHHHH------TCTTCSEEE
T ss_pred eEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHH---HHHHcCCC---Cc-CCHHHHh------cCCCCCEEE
Confidence 4688899984 43 23333445788888865 888765443 33344543 22 6766664 355789999
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE---eCcHHHHHHHHHHHHHcCCc
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ---SDIEEVMLRMKQQFLEYGKG 367 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~---td~~~~~~~~~~~l~~~g~~ 367 (420)
+.-|+.. -.+.+..+|+.|--++++ +-...-.+++.+..++.+..
T Consensus 95 i~tp~~~--------------h~~~~~~al~aGk~Vl~EKP~a~~~~ea~~l~~~a~~~g~~ 142 (350)
T 3rc1_A 95 VPLPAVL--------------HAEWIDRALRAGKHVLAEKPLTTDRPQAERLFAVARERGLL 142 (350)
T ss_dssp ECCCGGG--------------HHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCC
T ss_pred ECCCcHH--------------HHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCE
Confidence 8755543 122334456666556554 22344455666666666654
No 395
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=75.39 E-value=6 Score=37.79 Aligned_cols=93 Identities=14% Similarity=0.125 Sum_probs=59.3
Q ss_pred CCCEEEEEcCCc-cHHHHHHHHhCCCC-eEEEEeCChHHHHHHHHHhHHhCCCcEEEEEc---ChhhhhhhhhccCCCeE
Q 014711 230 AQPLVVDIGSGN-GLFLLGMARKRKDL-NFLGLEVNGKLVTHCRDSLQLSGITNGYFIAT---NATSTFRSIVASYPGKL 304 (420)
Q Consensus 230 ~~~~vLDIGcG~-G~~~~~lA~~~P~~-~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~---Da~~~~~~~~~~~~~~~ 304 (420)
.+..||-+|+|. |..++.+|+.. .. +++++|.+++.++.+++. .. ..+.. |..+.+.+. ....+
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~-Ga~~Vi~~~~~~~~~~~~~~l-----a~--~v~~~~~~~~~~~~~~~---~~~g~ 232 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRAS-GAGPILVSDPNPYRLAFARPY-----AD--RLVNPLEEDLLEVVRRV---TGSGV 232 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHT-TCCSEEEECSCHHHHGGGTTT-----CS--EEECTTTSCHHHHHHHH---HSSCE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHh-----HH--hccCcCccCHHHHHHHh---cCCCC
Confidence 357799999865 77888888876 45 899999998877666432 11 11211 221111111 13458
Q ss_pred eEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 305 ILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 305 d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
|.++-.-.. +..++...+.|+++|++.+.
T Consensus 233 D~vid~~g~--------------~~~~~~~~~~l~~~G~iv~~ 261 (343)
T 2dq4_A 233 EVLLEFSGN--------------EAAIHQGLMALIPGGEARIL 261 (343)
T ss_dssp EEEEECSCC--------------HHHHHHHHHHEEEEEEEEEC
T ss_pred CEEEECCCC--------------HHHHHHHHHHHhcCCEEEEE
Confidence 888654222 25678888999999998764
No 396
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=74.25 E-value=15 Score=35.31 Aligned_cols=107 Identities=19% Similarity=0.216 Sum_probs=60.5
Q ss_pred CEEEEEcCCc-cHHHHHHHHhCCCCeEEEE-eCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 232 PLVVDIGSGN-GLFLLGMARKRKDLNFLGL-EVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 232 ~~vLDIGcG~-G~~~~~lA~~~P~~~viGi-Dis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
.+|.=||||. |..-+...+..|+..++++ |.+++..+.+ .+.+.. ...|..+++ .+..+|.|++
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a----~~~g~~----~~~~~~~ll------~~~~~D~V~i 71 (359)
T 3e18_A 6 YQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAA----AQKGLK----IYESYEAVL------ADEKVDAVLI 71 (359)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHH----HTTTCC----BCSCHHHHH------HCTTCCEEEE
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHH----HhcCCc----eeCCHHHHh------cCCCCCEEEE
Confidence 4577899985 4433444455788888876 9998775433 334432 235665553 2457899998
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE---eCcHHHHHHHHHHHHHcCC
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ---SDIEEVMLRMKQQFLEYGK 366 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~---td~~~~~~~~~~~l~~~g~ 366 (420)
.-|+.. | .+.+..+|+.|--++++ +-.....+++.+..++.+.
T Consensus 72 ~tp~~~----h----------~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~ 117 (359)
T 3e18_A 72 ATPNDS----H----------KELAISALEAGKHVVCEKPVTMTSEDLLAIMDVAKRVNK 117 (359)
T ss_dssp CSCGGG----H----------HHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTC
T ss_pred cCCcHH----H----------HHHHHHHHHCCCCEEeeCCCcCCHHHHHHHHHHHHHhCC
Confidence 755543 1 12233455555555553 2233334555555555554
No 397
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=74.19 E-value=19 Score=34.30 Aligned_cols=109 Identities=14% Similarity=0.028 Sum_probs=63.5
Q ss_pred EEEEEcCCc-cHHHHHHHHhCCCCeEEE-EeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEEe
Q 014711 233 LVVDIGSGN-GLFLLGMARKRKDLNFLG-LEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQ 310 (420)
Q Consensus 233 ~vLDIGcG~-G~~~~~lA~~~P~~~viG-iDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~~ 310 (420)
+|.=||||. |...+....+.|+..+++ +|.+++..+.+.+ +.+.. -...|..+++ .+..+|.|++.
T Consensus 4 rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~---~~~~~---~~~~~~~~ll------~~~~~D~V~i~ 71 (344)
T 3ezy_A 4 RIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKE---KLGVE---KAYKDPHELI------EDPNVDAVLVC 71 (344)
T ss_dssp EEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHH---HHTCS---EEESSHHHHH------HCTTCCEEEEC
T ss_pred EEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHH---HhCCC---ceeCCHHHHh------cCCCCCEEEEc
Confidence 466789975 333333333468888886 5999876554433 34442 2346666654 24568999987
Q ss_pred CCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE---eCcHHHHHHHHHHHHHcCCc
Q 014711 311 CPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ---SDIEEVMLRMKQQFLEYGKG 367 (420)
Q Consensus 311 fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~---td~~~~~~~~~~~l~~~g~~ 367 (420)
-|+.+ -...+..+|+.|-.++++ +-...-.+++.+..++.+..
T Consensus 72 tp~~~--------------h~~~~~~al~~gk~v~~EKP~~~~~~e~~~l~~~a~~~g~~ 117 (344)
T 3ezy_A 72 SSTNT--------------HSELVIACAKAKKHVFCEKPLSLNLADVDRMIEETKKADVI 117 (344)
T ss_dssp SCGGG--------------HHHHHHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHHHTCC
T ss_pred CCCcc--------------hHHHHHHHHhcCCeEEEECCCCCCHHHHHHHHHHHHHhCCc
Confidence 55543 122333556666666665 23344456677777776654
No 398
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=73.79 E-value=16 Score=34.68 Aligned_cols=109 Identities=9% Similarity=0.068 Sum_probs=68.3
Q ss_pred CCEEEEEcCCccHHHHHHHHhCC-CCeEEEEeCChHHHHHHHHHhHHhC---CCcEEEEEcChhhhhhhhhcc--CCCeE
Q 014711 231 QPLVVDIGSGNGLFLLGMARKRK-DLNFLGLEVNGKLVTHCRDSLQLSG---ITNGYFIATNATSTFRSIVAS--YPGKL 304 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~~P-~~~viGiDis~~~i~~A~~~~~~~~---l~nv~~~~~Da~~~~~~~~~~--~~~~~ 304 (420)
...||++|||-=.....+. .| +..|+=+| .|..++..++.+.+.+ ..+.+++.+|+.+-+.+.+.. .+.+-
T Consensus 103 ~~QvV~LGaGlDTra~Rl~--~~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d~~~~~l~~~g~d~~~ 179 (310)
T 2uyo_A 103 IRQFVILASGLDSRAYRLD--WPTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQDWPPALRSAGFDPSA 179 (310)
T ss_dssp CCEEEEETCTTCCHHHHSC--CCTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTSCHHHHHHHTTCCTTS
T ss_pred CCeEEEeCCCCCchhhhcc--CCCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHhhHHHHHHhccCCCCC
Confidence 3569999999877755544 34 47999999 6999998888886543 357999999998622211110 01111
Q ss_pred eEEEEe-CCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEe
Q 014711 305 ILVSIQ-CPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 348 (420)
Q Consensus 305 d~i~~~-fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~t 348 (420)
-.+++. ..-.+.... -...+++.+...+.||+++.+..
T Consensus 180 Pt~~i~Egvl~Yl~~~------~~~~ll~~l~~~~~~gs~l~~d~ 218 (310)
T 2uyo_A 180 RTAWLAEGLLMYLPAT------AQDGLFTEIGGLSAVGSRIAVET 218 (310)
T ss_dssp CEEEEECSCGGGSCHH------HHHHHHHHHHHTCCTTCEEEEEC
T ss_pred CEEEEEechHhhCCHH------HHHHHHHHHHHhCCCCeEEEEEe
Confidence 222222 111111111 11478899999999999999975
No 399
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=73.38 E-value=5.1 Score=37.98 Aligned_cols=95 Identities=12% Similarity=0.047 Sum_probs=60.8
Q ss_pred CCCEEEEEc--CCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEc--ChhhhhhhhhccCCCeEe
Q 014711 230 AQPLVVDIG--SGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIAT--NATSTFRSIVASYPGKLI 305 (420)
Q Consensus 230 ~~~~vLDIG--cG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~--Da~~~~~~~~~~~~~~~d 305 (420)
.+..||=+| .|.|..++.+|+.. +.++++++.+++.++.+++ .|... .+-.. |..+.+.+.. ....+|
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~----~Ga~~-~~~~~~~~~~~~~~~~~--~~~g~D 211 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWAKAL-GAKLIGTVSSPEKAAHAKA----LGAWE-TIDYSHEDVAKRVLELT--DGKKCP 211 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHH----HTCSE-EEETTTSCHHHHHHHHT--TTCCEE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH----cCCCE-EEeCCCccHHHHHHHHh--CCCCce
Confidence 467899888 35688888888875 5699999999998887754 34321 22111 2222112222 234689
Q ss_pred EEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 306 LVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 306 ~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
.++-.... ..+....+.|+++|++.+.
T Consensus 212 vvid~~g~---------------~~~~~~~~~l~~~G~iv~~ 238 (325)
T 3jyn_A 212 VVYDGVGQ---------------DTWLTSLDSVAPRGLVVSF 238 (325)
T ss_dssp EEEESSCG---------------GGHHHHHTTEEEEEEEEEC
T ss_pred EEEECCCh---------------HHHHHHHHHhcCCCEEEEE
Confidence 88654211 3456778899999999875
No 400
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=73.22 E-value=10 Score=36.44 Aligned_cols=92 Identities=16% Similarity=0.118 Sum_probs=58.2
Q ss_pred CCEEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCCh---HHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeE
Q 014711 231 QPLVVDIGSGN-GLFLLGMARKRKDLNFLGLEVNG---KLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLIL 306 (420)
Q Consensus 231 ~~~vLDIGcG~-G~~~~~lA~~~P~~~viGiDis~---~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~ 306 (420)
+..||=+|+|. |..++.+|+.. +.+++++|.++ +.++.+++ .|...+ -..|..+.+.+ . ...+|.
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~~~----~ga~~v--~~~~~~~~~~~-~---~~~~d~ 249 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTY-GLEVWMANRREPTEVEQTVIEE----TKTNYY--NSSNGYDKLKD-S---VGKFDV 249 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHH-TCEEEEEESSCCCHHHHHHHHH----HTCEEE--ECTTCSHHHHH-H---HCCEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCccchHHHHHHHH----hCCcee--chHHHHHHHHH-h---CCCCCE
Confidence 67899999853 66677777765 45999999998 76666543 344322 11121111111 1 146888
Q ss_pred EEEeCCCCCCCCcchhhhhhHHHHH-HHHHhhccCCeEEEEE
Q 014711 307 VSIQCPNPDFNRPEHRWRMVQRSLV-EAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 307 i~~~fpdp~~k~~~~k~Rl~~~~~l-~~i~~~LkpgG~l~~~ 347 (420)
++-.-..+ ..+ +...+.|+++|++++.
T Consensus 250 vid~~g~~--------------~~~~~~~~~~l~~~G~iv~~ 277 (366)
T 2cdc_A 250 IIDATGAD--------------VNILGNVIPLLGRNGVLGLF 277 (366)
T ss_dssp EEECCCCC--------------THHHHHHGGGEEEEEEEEEC
T ss_pred EEECCCCh--------------HHHHHHHHHHHhcCCEEEEE
Confidence 87654333 345 7888999999998764
No 401
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=72.90 E-value=11 Score=35.55 Aligned_cols=95 Identities=15% Similarity=0.086 Sum_probs=60.2
Q ss_pred CCCEEEEEcC--CccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEc--ChhhhhhhhhccCCCeEe
Q 014711 230 AQPLVVDIGS--GNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIAT--NATSTFRSIVASYPGKLI 305 (420)
Q Consensus 230 ~~~~vLDIGc--G~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~--Da~~~~~~~~~~~~~~~d 305 (420)
.+..+|-.|+ |.|..++.+++.. +.+++++|.+++.++.+++ .+.. ..+-.. |..+.+.+.. ....+|
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~~~-G~~Vi~~~~~~~~~~~~~~----~g~~-~~~d~~~~~~~~~i~~~~--~~~~~d 216 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWARHL-GATVIGTVSTEEKAETARK----LGCH-HTINYSTQDFAEVVREIT--GGKGVD 216 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH----HTCS-EEEETTTSCHHHHHHHHH--TTCCEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH----cCCC-EEEECCCHHHHHHHHHHh--CCCCCe
Confidence 4678999995 6788888888875 5699999999988777654 3433 112111 1111111221 234688
Q ss_pred EEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 306 LVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 306 ~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
.++-+-.. ..++...+.|+++|++++.
T Consensus 217 ~vi~~~g~---------------~~~~~~~~~l~~~G~iv~~ 243 (333)
T 1wly_A 217 VVYDSIGK---------------DTLQKSLDCLRPRGMCAAY 243 (333)
T ss_dssp EEEECSCT---------------TTHHHHHHTEEEEEEEEEC
T ss_pred EEEECCcH---------------HHHHHHHHhhccCCEEEEE
Confidence 88654221 2456778899999998764
No 402
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=72.41 E-value=23 Score=33.81 Aligned_cols=108 Identities=15% Similarity=0.161 Sum_probs=60.0
Q ss_pred CEEEEEcCCc-cHHHHHHHHhCCCCeEEEE-eCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 232 PLVVDIGSGN-GLFLLGMARKRKDLNFLGL-EVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 232 ~~vLDIGcG~-G~~~~~lA~~~P~~~viGi-Dis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
.+|.=||||. |...+...+..|+..++++ |.+++..+...+ +.+.+. ..|..+++ .+..+|.|++
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~---~~g~~~----~~~~~~~l------~~~~~D~V~i 72 (354)
T 3db2_A 6 VGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGK---RYNCAG----DATMEALL------AREDVEMVII 72 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHH---HHTCCC----CSSHHHHH------HCSSCCEEEE
T ss_pred ceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHH---HcCCCC----cCCHHHHh------cCCCCCEEEE
Confidence 4577899985 3333333344678887755 998876554433 345432 45665553 2457899998
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE---eCcHHHHHHHHHHHHHcCC
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ---SDIEEVMLRMKQQFLEYGK 366 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~---td~~~~~~~~~~~l~~~g~ 366 (420)
.-|+.. | .+.+..+|+.|-.++++ +-.....+++.+..++.+.
T Consensus 73 ~tp~~~----h----------~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~~~ 118 (354)
T 3db2_A 73 TVPNDK----H----------AEVIEQCARSGKHIYVEKPISVSLDHAQRIDQVIKETGV 118 (354)
T ss_dssp CSCTTS----H----------HHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHCC
T ss_pred eCChHH----H----------HHHHHHHHHcCCEEEEccCCCCCHHHHHHHHHHHHHcCC
Confidence 766654 1 12233455555555554 2233334455555555554
No 403
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=72.40 E-value=24 Score=33.41 Aligned_cols=111 Identities=14% Similarity=0.048 Sum_probs=62.4
Q ss_pred CCEEEEEcCCc-cHHHHHHHH-hCCCCeEEE-EeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEE
Q 014711 231 QPLVVDIGSGN-GLFLLGMAR-KRKDLNFLG-LEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILV 307 (420)
Q Consensus 231 ~~~vLDIGcG~-G~~~~~lA~-~~P~~~viG-iDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i 307 (420)
..+|.=||||. |...+.... ..|+.++++ +|.+++..+.+.+ +.+.. -...|..+++ .+..+|.|
T Consensus 8 ~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~---~~g~~---~~~~~~~~~l------~~~~~D~V 75 (346)
T 3cea_A 8 PLRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKN---ELGVE---TTYTNYKDMI------DTENIDAI 75 (346)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHH---TTCCS---EEESCHHHHH------TTSCCSEE
T ss_pred cceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHH---HhCCC---cccCCHHHHh------cCCCCCEE
Confidence 35788899985 444334344 567888765 5999876544322 33432 2245665553 24468999
Q ss_pred EEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEe---CcHHHHHHHHHHHHHc-CCc
Q 014711 308 SIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS---DIEEVMLRMKQQFLEY-GKG 367 (420)
Q Consensus 308 ~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~t---d~~~~~~~~~~~l~~~-g~~ 367 (420)
++.-|+.. -...+..+|+.|-.+++.- -.....+++.+..++. +..
T Consensus 76 ~i~tp~~~--------------h~~~~~~al~~G~~v~~eKp~~~~~~~~~~l~~~a~~~~~~~ 125 (346)
T 3cea_A 76 FIVAPTPF--------------HPEMTIYAMNAGLNVFCEKPLGLDFNEVDEMAKVIKSHPNQI 125 (346)
T ss_dssp EECSCGGG--------------HHHHHHHHHHTTCEEEECSCCCSCHHHHHHHHHHHHTCTTSC
T ss_pred EEeCChHh--------------HHHHHHHHHHCCCEEEEcCCCCCCHHHHHHHHHHHHhCCCCe
Confidence 88755442 1233345666765555531 1233345566666666 543
No 404
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=72.28 E-value=60 Score=35.99 Aligned_cols=128 Identities=12% Similarity=0.090 Sum_probs=79.5
Q ss_pred CCEEEEEcCCccHHHHHHHHhCCCC--eEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhh------------
Q 014711 231 QPLVVDIGSGNGLFLLGMARKRKDL--NFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSI------------ 296 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~~P~~--~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~------------ 296 (420)
...++|+-||.|.+...|.+. +. .+.++|+++.+++.-+.|. ++..+++.|+.++....
T Consensus 540 ~l~~iDLFaG~GGlslGl~~A--G~~~vv~avEid~~A~~ty~~N~-----p~~~~~~~DI~~l~~~~~~~di~~~~~~~ 612 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQA--GISDTLWAIEMWDPAAQAFRLNN-----PGSTVFTEDCNILLKLVMAGETTNSRGQR 612 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHH--TSEEEEEEECSSHHHHHHHHHHC-----TTSEEECSCHHHHHHHHHHTCSBCTTCCB
T ss_pred CCeEEEeccCccHHHHHHHHC--CCCceEEEEECCHHHHHHHHHhC-----CCCccccccHHHHhhhccchhhhhhhhhh
Confidence 468999999999999998776 43 5789999999988766653 45677888887653210
Q ss_pred hccCCCeEeEEEEeCCC-CCCCCcchhh--------hhhHHHHHHHHHhhccCCeEEEEEe-------CcHHHHHHHHHH
Q 014711 297 VASYPGKLILVSIQCPN-PDFNRPEHRW--------RMVQRSLVEAVSDLLVHDGKVFLQS-------DIEEVMLRMKQQ 360 (420)
Q Consensus 297 ~~~~~~~~d~i~~~fpd-p~~k~~~~k~--------Rl~~~~~l~~i~~~LkpgG~l~~~t-------d~~~~~~~~~~~ 360 (420)
++ ..+.+|.|+..+|= ++......+. .|+ ..+++ +.+.++|-- |+++- +....+..+++.
T Consensus 613 lp-~~~~vDll~GGpPCQ~FS~ag~~~~~~~~d~R~~L~-~~~~r-iv~~~rPk~-~llENV~glls~~~~~~~~~i~~~ 688 (1002)
T 3swr_A 613 LP-QKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLV-VSFLS-YCDYYRPRF-FLLENVRNFVSFKRSMVLKLTLRC 688 (1002)
T ss_dssp CC-CTTTCSEEEECCCCTTCCSSSCCCHHHHHHHTTSHH-HHHHH-HHHHHCCSE-EEEEEEGGGGTTGGGHHHHHHHHH
T ss_pred cc-cCCCeeEEEEcCCCcchhhhCCCCCCcccchhhHHH-HHHHH-HHHHhCCCE-EEEeccHHHhccCcchHHHHHHHH
Confidence 11 12468998887652 2322211111 121 24444 345567854 44441 223456778888
Q ss_pred HHHcCCcee
Q 014711 361 FLEYGKGKL 369 (420)
Q Consensus 361 l~~~g~~~~ 369 (420)
|.+.|+...
T Consensus 689 L~~lGY~v~ 697 (1002)
T 3swr_A 689 LVRMGYQCT 697 (1002)
T ss_dssp HHHHTCEEE
T ss_pred HHhcCCeEE
Confidence 888887543
No 405
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=72.27 E-value=4 Score=35.14 Aligned_cols=105 Identities=13% Similarity=0.107 Sum_probs=65.3
Q ss_pred CCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEEe
Q 014711 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQ 310 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~~ 310 (420)
..-|||+|-|+|..--+|.+.+|+..++.+|.--..- ...-.+.=.++.+|+.+.++.....-......++..
T Consensus 41 ~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR~~~~h-------p~~~P~~e~~ilGdi~~tL~~~~~r~g~~a~LaHaD 113 (174)
T 3iht_A 41 SGPVYELGLGNGRTYHHLRQHVQGREIYVFERAVASH-------PDSTPPEAQLILGDIRETLPATLERFGATASLVHAD 113 (174)
T ss_dssp CSCEEEECCTTCHHHHHHHHHCCSSCEEEEESSCCCC-------GGGCCCGGGEEESCHHHHHHHHHHHHCSCEEEEEEC
T ss_pred CCceEEecCCCChhHHHHHHhCCCCcEEEEEeeeccC-------CCCCCchHheecccHHHHHHHHHHhcCCceEEEEee
Confidence 3459999999999999999999999999999542110 001122346889999988764311014455666654
Q ss_pred CCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEE
Q 014711 311 CPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFL 346 (420)
Q Consensus 311 fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~ 346 (420)
+-.. .+ .+.-.+...+-..+..+|.|||.++-
T Consensus 114 ~G~g---~~-~~d~a~a~~lsplI~~~la~GGi~vS 145 (174)
T 3iht_A 114 LGGH---NR-EKNDRFARLISPLIEPHLAQGGLMVS 145 (174)
T ss_dssp CCCS---CH-HHHHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred cCCC---Cc-chhHHHHHhhhHHHHHHhcCCcEEEe
Confidence 3211 11 11111122344567889999998864
No 406
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=72.15 E-value=44 Score=38.25 Aligned_cols=131 Identities=11% Similarity=0.061 Sum_probs=79.3
Q ss_pred CCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhh------------hc
Q 014711 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSI------------VA 298 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~------------~~ 298 (420)
...++|+-||.|.+...+.+..-...+.++|+++.+++.-+.|. ++..+++.|+..++... ++
T Consensus 851 ~l~viDLFsG~GGlslGfe~AG~~~vv~avEid~~A~~ty~~N~-----p~~~~~~~DI~~l~~~~~~gdi~~~~~~~lp 925 (1330)
T 3av4_A 851 KLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNN-----PGTTVFTEDCNVLLKLVMAGEVTNSLGQRLP 925 (1330)
T ss_dssp CEEEEEETCTTSHHHHHHHHTTSEEEEEEECCSHHHHHHHHHHC-----TTSEEECSCHHHHHHHHTTTCSBCSSCCBCC
T ss_pred CceEEecccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhC-----CCCcEeeccHHHHhHhhhccchhhhhhhhcc
Confidence 46799999999999999877621125889999999988766653 34567788887664211 11
Q ss_pred cCCCeEeEEEEeCCC-CCCCCcchhhhh-------hHHHHHHHHHhhccCCeEEEEEe-------CcHHHHHHHHHHHHH
Q 014711 299 SYPGKLILVSIQCPN-PDFNRPEHRWRM-------VQRSLVEAVSDLLVHDGKVFLQS-------DIEEVMLRMKQQFLE 363 (420)
Q Consensus 299 ~~~~~~d~i~~~fpd-p~~k~~~~k~Rl-------~~~~~l~~i~~~LkpgG~l~~~t-------d~~~~~~~~~~~l~~ 363 (420)
..+.+|.|+..+|= ++......+.|- +-..+++. .+.++|- +|+++- +....+..+++.|.+
T Consensus 926 -~~~~vDvl~GGpPCQ~FS~agr~~~~~~~d~R~~L~~~~lri-v~~~rPk-~fv~ENV~glls~~~g~~~~~il~~L~~ 1002 (1330)
T 3av4_A 926 -QKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSY-CDYYRPR-FFLLENVRNFVSYRRSMVLKLTLRCLVR 1002 (1330)
T ss_dssp -CTTTCSEEEECCCCTTTCSSSCCCHHHHHHHHHSHHHHHHHH-HHHHCCS-EEEEEEEGGGGTTTTTHHHHHHHHHHHH
T ss_pred -ccCccceEEecCCCcccccccccccccccchhhHHHHHHHHH-HHHhcCc-EEEEeccHHHhccCccHHHHHHHHHHHh
Confidence 12468888877652 232222111111 11244443 3456785 455541 222356778888888
Q ss_pred cCCcee
Q 014711 364 YGKGKL 369 (420)
Q Consensus 364 ~g~~~~ 369 (420)
.|+...
T Consensus 1003 lGY~v~ 1008 (1330)
T 3av4_A 1003 MGYQCT 1008 (1330)
T ss_dssp HTCEEE
T ss_pred cCCeee
Confidence 887553
No 407
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=71.51 E-value=15 Score=30.50 Aligned_cols=115 Identities=13% Similarity=0.138 Sum_probs=63.1
Q ss_pred CCCEEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGN-GLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~-G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
.+..|+=+|||. |......+... +.+|+++|.+++.++.+++ .. ++.++.+|..+. ..+-...-..+|.|+
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~-g~~V~vid~~~~~~~~~~~---~~---g~~~~~~d~~~~-~~l~~~~~~~ad~Vi 89 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSS-GHSVVVVDKNEYAFHRLNS---EF---SGFTVVGDAAEF-ETLKECGMEKADMVF 89 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCGGGGGGSCT---TC---CSEEEESCTTSH-HHHHTTTGGGCSEEE
T ss_pred CCCcEEEECCCHHHHHHHHHHHhC-CCeEEEEECCHHHHHHHHh---cC---CCcEEEecCCCH-HHHHHcCcccCCEEE
Confidence 356788888854 33333333332 5689999999876543321 11 245666776542 111100123578888
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHHHHHHHHHHHHcCCc
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKG 367 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~~~~~~~~l~~~g~~ 367 (420)
+..+++. . ...+..+.+.+.+...++..+....+. +.+.+.|..
T Consensus 90 ~~~~~~~----------~-~~~~~~~~~~~~~~~~iv~~~~~~~~~----~~l~~~G~~ 133 (155)
T 2g1u_A 90 AFTNDDS----------T-NFFISMNARYMFNVENVIARVYDPEKI----KIFEENGIK 133 (155)
T ss_dssp ECSSCHH----------H-HHHHHHHHHHTSCCSEEEEECSSGGGH----HHHHTTTCE
T ss_pred EEeCCcH----------H-HHHHHHHHHHHCCCCeEEEEECCHHHH----HHHHHCCCc
Confidence 7655431 1 133444556666777888777666653 345556654
No 408
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=71.30 E-value=11 Score=35.88 Aligned_cols=94 Identities=17% Similarity=0.083 Sum_probs=59.6
Q ss_pred CCCEEEEEcC--CccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEE
Q 014711 230 AQPLVVDIGS--GNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILV 307 (420)
Q Consensus 230 ~~~~vLDIGc--G~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i 307 (420)
.+..||=+|+ |.|..++.+|+.. ..+++++ .+++.++.+++ .|...+. ...|..+.+.+.. ....+|.+
T Consensus 150 ~g~~VlV~Ga~g~iG~~~~q~a~~~-Ga~Vi~~-~~~~~~~~~~~----lGa~~i~-~~~~~~~~~~~~~--~~~g~D~v 220 (343)
T 3gaz_A 150 DGQTVLIQGGGGGVGHVAIQIALAR-GARVFAT-ARGSDLEYVRD----LGATPID-ASREPEDYAAEHT--AGQGFDLV 220 (343)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEE-ECHHHHHHHHH----HTSEEEE-TTSCHHHHHHHHH--TTSCEEEE
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHC-CCEEEEE-eCHHHHHHHHH----cCCCEec-cCCCHHHHHHHHh--cCCCceEE
Confidence 4688999994 4588888888875 5699999 88887776644 4543211 1112222212222 23468987
Q ss_pred EEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 308 SIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 308 ~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
+-.-. ...+....+.|+++|++++.
T Consensus 221 id~~g---------------~~~~~~~~~~l~~~G~iv~~ 245 (343)
T 3gaz_A 221 YDTLG---------------GPVLDASFSAVKRFGHVVSC 245 (343)
T ss_dssp EESSC---------------THHHHHHHHHEEEEEEEEES
T ss_pred EECCC---------------cHHHHHHHHHHhcCCeEEEE
Confidence 65421 14677788899999998863
No 409
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=70.50 E-value=30 Score=30.89 Aligned_cols=117 Identities=15% Similarity=0.076 Sum_probs=67.6
Q ss_pred CCEEEEEcCCccHHHHHHHHhC---CCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhh--hhhhc---cCCC
Q 014711 231 QPLVVDIGSGNGLFLLGMARKR---KDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTF--RSIVA---SYPG 302 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~~---P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~--~~~~~---~~~~ 302 (420)
+.++|=.| |+|.++..+++.. .+.+|+.++.++..++.+.+.+...+ .++.++.+|+.+.. ...+. ..-+
T Consensus 4 ~k~vlITG-asggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 81 (276)
T 1wma_A 4 IHVALVTG-GNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG-LSPRFHQLDIDDLQSIRALRDFLRKEYG 81 (276)
T ss_dssp CCEEEESS-CSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT-CCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeC-CCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcC-CeeEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 46677666 5677777766652 46799999999887777666665544 46889999987641 11111 0013
Q ss_pred eEeEEEEeCC--CCCC-CCc--chhhhhhH------HHHHHHHHhhccCCeEEEEEeC
Q 014711 303 KLILVSIQCP--NPDF-NRP--EHRWRMVQ------RSLVEAVSDLLVHDGKVFLQSD 349 (420)
Q Consensus 303 ~~d~i~~~fp--dp~~-k~~--~~k~Rl~~------~~~l~~i~~~LkpgG~l~~~td 349 (420)
.+|.++.+-- .+.. ... ..-.+.++ -.+++.+.+.++++|.+++.+-
T Consensus 82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS 139 (276)
T 1wma_A 82 GLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSS 139 (276)
T ss_dssp SEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred CCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECC
Confidence 6888765421 1111 100 11112221 2455666677777888887654
No 410
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=69.49 E-value=27 Score=33.14 Aligned_cols=74 Identities=9% Similarity=0.030 Sum_probs=45.6
Q ss_pred CCCEEEEEcCCc--cHHHHHHHHhC-CCCeEEE-EeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEe
Q 014711 230 AQPLVVDIGSGN--GLFLLGMARKR-KDLNFLG-LEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLI 305 (420)
Q Consensus 230 ~~~~vLDIGcG~--G~~~~~lA~~~-P~~~viG-iDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d 305 (420)
+..+|.=||||. |..-+...+.. |+..+++ +|.+++..+.+. ++.+.. -...|..+++ .+..+|
T Consensus 17 ~~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a---~~~~~~---~~~~~~~~ll------~~~~vD 84 (340)
T 1zh8_A 17 RKIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFA---KMVGNP---AVFDSYEELL------ESGLVD 84 (340)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHH---HHHSSC---EEESCHHHHH------HSSCCS
T ss_pred CceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHH---HHhCCC---cccCCHHHHh------cCCCCC
Confidence 346788999993 54433334445 7777765 588887655443 334432 2356776664 245699
Q ss_pred EEEEeCCCCC
Q 014711 306 LVSIQCPNPD 315 (420)
Q Consensus 306 ~i~~~fpdp~ 315 (420)
.|++.-|+.+
T Consensus 85 ~V~i~tp~~~ 94 (340)
T 1zh8_A 85 AVDLTLPVEL 94 (340)
T ss_dssp EEEECCCGGG
T ss_pred EEEEeCCchH
Confidence 9999765543
No 411
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=69.25 E-value=65 Score=34.38 Aligned_cols=57 Identities=12% Similarity=0.056 Sum_probs=40.8
Q ss_pred CCEEEEEcCCccHHHHHHHHhC----CC-CeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhh
Q 014711 231 QPLVVDIGSGNGLFLLGMARKR----KD-LNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATST 292 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~~----P~-~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~ 292 (420)
.-.++|+=||.|.+..-+.+.. +. -.+.++|+++.+++.-+.|. ++..+.+.|+.++
T Consensus 212 ~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nh-----p~~~~~~~di~~i 273 (784)
T 4ft4_B 212 TATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNH-----PQTEVRNEKADEF 273 (784)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHC-----TTSEEEESCHHHH
T ss_pred CCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHC-----CCCceecCcHHHh
Confidence 3579999999999987776541 11 25789999999988776653 3455666776554
No 412
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=69.07 E-value=8.9 Score=36.81 Aligned_cols=95 Identities=17% Similarity=0.057 Sum_probs=59.4
Q ss_pred CCCEEEEEcC--CccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEc--ChhhhhhhhhccCCCeEe
Q 014711 230 AQPLVVDIGS--GNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIAT--NATSTFRSIVASYPGKLI 305 (420)
Q Consensus 230 ~~~~vLDIGc--G~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~--Da~~~~~~~~~~~~~~~d 305 (420)
.+..||-.|+ |-|..++.+++.. +.+++++|.+++.++.+++ .|.. ..+-.. |..+.+.+.. ....+|
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~----~g~~-~~~~~~~~~~~~~~~~~~--~~~~~d 233 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTRMA-GAIPLVTAGSQKKLQMAEK----LGAA-AGFNYKKEDFSEATLKFT--KGAGVN 233 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHH----HTCS-EEEETTTSCHHHHHHHHT--TTSCEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHH----cCCc-EEEecCChHHHHHHHHHh--cCCCce
Confidence 4678999984 5677788888775 5799999999988877743 3432 112111 1111111211 234688
Q ss_pred EEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 306 LVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 306 ~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
.++-+-.. ..+....+.|+++|++.+.
T Consensus 234 ~vi~~~G~---------------~~~~~~~~~l~~~G~iv~~ 260 (354)
T 2j8z_A 234 LILDCIGG---------------SYWEKNVNCLALDGRWVLY 260 (354)
T ss_dssp EEEESSCG---------------GGHHHHHHHEEEEEEEEEC
T ss_pred EEEECCCc---------------hHHHHHHHhccCCCEEEEE
Confidence 88654221 2356677899999999874
No 413
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=68.90 E-value=14 Score=36.25 Aligned_cols=72 Identities=18% Similarity=0.118 Sum_probs=42.9
Q ss_pred CEEEEEcCCc-cHH-HHHHHHh---C----CCCeEEEE-eCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCC
Q 014711 232 PLVVDIGSGN-GLF-LLGMARK---R----KDLNFLGL-EVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYP 301 (420)
Q Consensus 232 ~~vLDIGcG~-G~~-~~~lA~~---~----P~~~viGi-Dis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~ 301 (420)
-+|-=||||. |.. +..+.+. . ++.+++++ |.+++..+.+ +++.+... ...|..+++ .+
T Consensus 27 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~---a~~~~~~~---~y~d~~~ll------~~ 94 (412)
T 4gqa_A 27 LNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERH---AAKLGAEK---AYGDWRELV------ND 94 (412)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHH---HHHHTCSE---EESSHHHHH------HC
T ss_pred ceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHH---HHHcCCCe---EECCHHHHh------cC
Confidence 4678899985 322 2223221 2 24567765 9988765544 34455542 356777764 25
Q ss_pred CeEeEEEEeCCCCC
Q 014711 302 GKLILVSIQCPNPD 315 (420)
Q Consensus 302 ~~~d~i~~~fpdp~ 315 (420)
..+|.|++.-|+.+
T Consensus 95 ~~vD~V~I~tp~~~ 108 (412)
T 4gqa_A 95 PQVDVVDITSPNHL 108 (412)
T ss_dssp TTCCEEEECSCGGG
T ss_pred CCCCEEEECCCcHH
Confidence 57899999766554
No 414
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=67.67 E-value=12 Score=35.89 Aligned_cols=94 Identities=18% Similarity=0.150 Sum_probs=57.9
Q ss_pred CCCEEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGN-GLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~-G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
.+..||=+|+|. |..++.+|+.. ..+++++|.+++.++.+++ +.|...+ +-..|...+ .+. .+.+|.++
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~-Ga~Vi~~~~~~~~~~~~~~---~lGa~~v-i~~~~~~~~-~~~----~~g~D~vi 249 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAM-GHHVTVISSSNKKREEALQ---DLGADDY-VIGSDQAKM-SEL----ADSLDYVI 249 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHH-TCEEEEEESSTTHHHHHHT---TSCCSCE-EETTCHHHH-HHS----TTTEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHH---HcCCcee-eccccHHHH-HHh----cCCCCEEE
Confidence 467888889864 67778888876 4689999999887766653 2444322 111222111 211 23588886
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
-.-..+ ..++...+.|+++|++.+.
T Consensus 250 d~~g~~--------------~~~~~~~~~l~~~G~iv~~ 274 (357)
T 2cf5_A 250 DTVPVH--------------HALEPYLSLLKLDGKLILM 274 (357)
T ss_dssp ECCCSC--------------CCSHHHHTTEEEEEEEEEC
T ss_pred ECCCCh--------------HHHHHHHHHhccCCEEEEe
Confidence 543322 1235566899999998764
No 415
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=67.65 E-value=16 Score=34.92 Aligned_cols=93 Identities=11% Similarity=0.084 Sum_probs=58.8
Q ss_pred CEEEEEcC--CccHHHHHHHHhCCCC-eEEEEeCChHHHHHHHHHhHHhCCCcEEEEEc--ChhhhhhhhhccCCCeEeE
Q 014711 232 PLVVDIGS--GNGLFLLGMARKRKDL-NFLGLEVNGKLVTHCRDSLQLSGITNGYFIAT--NATSTFRSIVASYPGKLIL 306 (420)
Q Consensus 232 ~~vLDIGc--G~G~~~~~lA~~~P~~-~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~--Da~~~~~~~~~~~~~~~d~ 306 (420)
..||=.|+ |.|..++.+++.. +. ++++++.+++.++.+++. .|.. ..+-.. +..+.+.+.. .+.+|.
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~~-Ga~~Vi~~~~~~~~~~~~~~~---~g~~-~~~d~~~~~~~~~~~~~~---~~~~d~ 233 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHFL-GCSRVVGICGTHEKCILLTSE---LGFD-AAINYKKDNVAEQLRESC---PAGVDV 233 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHHT---SCCS-EEEETTTSCHHHHHHHHC---TTCEEE
T ss_pred cEEEEECCCcHHHHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHH---cCCc-eEEecCchHHHHHHHHhc---CCCCCE
Confidence 78999998 5677777888775 56 999999998877666542 3432 112111 1111111211 236888
Q ss_pred EEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 307 VSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 307 i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
++-+-. ...+....+.|+++|++++.
T Consensus 234 vi~~~G---------------~~~~~~~~~~l~~~G~iv~~ 259 (357)
T 2zb4_A 234 YFDNVG---------------GNISDTVISQMNENSHIILC 259 (357)
T ss_dssp EEESCC---------------HHHHHHHHHTEEEEEEEEEC
T ss_pred EEECCC---------------HHHHHHHHHHhccCcEEEEE
Confidence 865411 15677888999999998764
No 416
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=67.26 E-value=36 Score=26.96 Aligned_cols=111 Identities=14% Similarity=0.100 Sum_probs=61.1
Q ss_pred CEEEEEcCCccHHHHHHHHh--CCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 232 PLVVDIGSGNGLFLLGMARK--RKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 232 ~~vLDIGcG~G~~~~~lA~~--~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
..++=+|| |.++..+++. ..+.+++.+|.+++.++.++ ..+ ..++.+|..+. ..+-...-..+|.++.
T Consensus 7 ~~v~I~G~--G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~----~~~---~~~~~~d~~~~-~~l~~~~~~~~d~vi~ 76 (144)
T 2hmt_A 7 KQFAVIGL--GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA----SYA---THAVIANATEE-NELLSLGIRNFEYVIV 76 (144)
T ss_dssp CSEEEECC--SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTT----TTC---SEEEECCTTCH-HHHHTTTGGGCSEEEE
T ss_pred CcEEEECC--CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HhC---CEEEEeCCCCH-HHHHhcCCCCCCEEEE
Confidence 45788887 5666555544 12568999999987654322 122 35667776543 1111001246888887
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHHHHHHHHHHHHcCCc
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFLEYGKG 367 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~~~~~~~~l~~~g~~ 367 (420)
..+++. . . ...+....+.+.+. .++..+....+.+ .+++.|..
T Consensus 77 ~~~~~~-----~----~-~~~~~~~~~~~~~~-~ii~~~~~~~~~~----~l~~~g~~ 119 (144)
T 2hmt_A 77 AIGANI-----Q----A-STLTTLLLKELDIP-NIWVKAQNYYHHK----VLEKIGAD 119 (144)
T ss_dssp CCCSCH-----H----H-HHHHHHHHHHTTCS-EEEEECCSHHHHH----HHHHHTCS
T ss_pred CCCCch-----H----H-HHHHHHHHHHcCCC-eEEEEeCCHHHHH----HHHHcCCC
Confidence 755431 0 1 12344455566776 7776666666533 35555654
No 417
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=67.16 E-value=18 Score=34.48 Aligned_cols=109 Identities=13% Similarity=0.091 Sum_probs=59.2
Q ss_pred EEEEEcCCc-cH-HHHHHHHhCCCCeEEEE-eCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 233 LVVDIGSGN-GL-FLLGMARKRKDLNFLGL-EVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 233 ~vLDIGcG~-G~-~~~~lA~~~P~~~viGi-Dis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
+|.=||||. |. +.....+..|+..++++ |.+ .+++.+.+.+..++. ...|..+++ .+..+|.|++
T Consensus 4 rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~-----~~~~~a~~~~~~~~~-~~~~~~~ll------~~~~~D~V~i 71 (349)
T 3i23_A 4 KMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLH-----VNEKAAAPFKEKGVN-FTADLNELL------TDPEIELITI 71 (349)
T ss_dssp EEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTT-----CCHHHHHHHHTTTCE-EESCTHHHH------SCTTCCEEEE
T ss_pred EEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCC-----HHHHHHHhhCCCCCe-EECCHHHHh------cCCCCCEEEE
Confidence 466789997 44 44555556788888866 444 233333343333444 346666664 3557899998
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE---eCcHHHHHHHHHHHHHcCCc
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ---SDIEEVMLRMKQQFLEYGKG 367 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~---td~~~~~~~~~~~l~~~g~~ 367 (420)
.-|+.. | .+.+.++|+.|=-++++ +-.....+++.+..++.+..
T Consensus 72 ~tp~~~----h----------~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~ 118 (349)
T 3i23_A 72 CTPAHT----H----------YDLAKQAILAGKSVIVEKPFCDTLEHAEELFALGQEKGVV 118 (349)
T ss_dssp CSCGGG----H----------HHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCC
T ss_pred eCCcHH----H----------HHHHHHHHHcCCEEEEECCCcCCHHHHHHHHHHHHHcCCe
Confidence 755543 1 12233455555444443 11233344555555555543
No 418
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=67.12 E-value=15 Score=35.39 Aligned_cols=94 Identities=13% Similarity=0.162 Sum_probs=57.7
Q ss_pred CCCEEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGN-GLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~-G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
.+..||=+|+|. |..++.+|+.. ..++++++.+++.++.+++. .|... .+-..+. +.+.+. .+.+|.++
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~---lGa~~-v~~~~~~-~~~~~~----~~~~D~vi 256 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAF-GSKVTVISTSPSKKEEALKN---FGADS-FLVSRDQ-EQMQAA----AGTLDGII 256 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCGGGHHHHHHT---SCCSE-EEETTCH-HHHHHT----TTCEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHh---cCCce-EEeccCH-HHHHHh----hCCCCEEE
Confidence 367788899864 67777888775 56999999999877766532 34332 1212221 111221 23688887
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
-....+. .++...+.|+++|+++..
T Consensus 257 d~~g~~~--------------~~~~~~~~l~~~G~iv~~ 281 (366)
T 1yqd_A 257 DTVSAVH--------------PLLPLFGLLKSHGKLILV 281 (366)
T ss_dssp ECCSSCC--------------CSHHHHHHEEEEEEEEEC
T ss_pred ECCCcHH--------------HHHHHHHHHhcCCEEEEE
Confidence 6533331 234556789999988764
No 419
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=67.10 E-value=29 Score=33.23 Aligned_cols=111 Identities=14% Similarity=0.051 Sum_probs=64.4
Q ss_pred CEEEEEcCCc-cHHH-HHHHHhCCCCeEEE-EeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 232 PLVVDIGSGN-GLFL-LGMARKRKDLNFLG-LEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 232 ~~vLDIGcG~-G~~~-~~lA~~~P~~~viG-iDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
.+|.=||||. |..- ..+++..|+..+++ +|.+++..+...+ +.++. + -...|..+++ .+..+|.|+
T Consensus 24 ~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~---~~g~~-~-~~~~~~~~ll------~~~~~D~V~ 92 (357)
T 3ec7_A 24 LKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALD---KYAIE-A-KDYNDYHDLI------NDKDVEVVI 92 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHH---HHTCC-C-EEESSHHHHH------HCTTCCEEE
T ss_pred eeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHH---HhCCC-C-eeeCCHHHHh------cCCCCCEEE
Confidence 4688899987 4433 33343578888886 6998876654433 34431 1 2346666654 245689999
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE---eCcHHHHHHHHHHHHHcCCc
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ---SDIEEVMLRMKQQFLEYGKG 367 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~---td~~~~~~~~~~~l~~~g~~ 367 (420)
+.-|+.. -.+.+..+|+.|--++++ +-...-.+++.+..++.+..
T Consensus 93 i~tp~~~--------------h~~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~ 140 (357)
T 3ec7_A 93 ITASNEA--------------HADVAVAALNANKYVFCEKPLAVTAADCQRVIEAEQKNGKR 140 (357)
T ss_dssp ECSCGGG--------------HHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHTSC
T ss_pred EcCCcHH--------------HHHHHHHHHHCCCCEEeecCccCCHHHHHHHHHHHHHhCCe
Confidence 8755543 122334556666666654 22344455566666666643
No 420
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=65.99 E-value=41 Score=31.96 Aligned_cols=96 Identities=13% Similarity=0.106 Sum_probs=58.4
Q ss_pred CEEEEEcCCc--cHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhH-------HhCC-----------CcEEEEEcChhh
Q 014711 232 PLVVDIGSGN--GLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQ-------LSGI-----------TNGYFIATNATS 291 (420)
Q Consensus 232 ~~vLDIGcG~--G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~-------~~~l-----------~nv~~~~~Da~~ 291 (420)
..|.=||+|+ +.++..+++. +.+|+++|++++.++.+++++. +.|+ .++++. .|..+
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~--G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~-~~~~e 83 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASG--GFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC-TNLAE 83 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE-CCHHH
T ss_pred ceEEEEeeCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEe-CCHHH
Confidence 4567788875 2333444444 6789999999999988876532 1231 134432 33332
Q ss_pred hhhhhhccCCCeEeEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 292 TFRSIVASYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 292 ~~~~~~~~~~~~~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
. -...|.|+..-|+.. .+...++.++...++|+..+.-.
T Consensus 84 a--------v~~aDlVieavpe~~---------~~k~~v~~~l~~~~~~~~Ii~s~ 122 (319)
T 2dpo_A 84 A--------VEGVVHIQECVPENL---------DLKRKIFAQLDSIVDDRVVLSSS 122 (319)
T ss_dssp H--------TTTEEEEEECCCSCH---------HHHHHHHHHHHTTCCSSSEEEEC
T ss_pred H--------HhcCCEEEEeccCCH---------HHHHHHHHHHHhhCCCCeEEEEe
Confidence 2 124688887755431 12246778889999998876543
No 421
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=65.62 E-value=11 Score=35.25 Aligned_cols=87 Identities=14% Similarity=0.104 Sum_probs=56.3
Q ss_pred CCCEEEEEcCCc-cHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 230 AQPLVVDIGSGN-GLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 230 ~~~~vLDIGcG~-G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
.+..||=+|+|. |..++.+|+.. +.++++++ |++.++.+++ .|... ++ .| . .. + ...+|.++
T Consensus 142 ~g~~VlV~GaG~vG~~a~qlak~~-Ga~Vi~~~-~~~~~~~~~~----lGa~~--v~-~d-~---~~-v---~~g~Dvv~ 204 (315)
T 3goh_A 142 KQREVLIVGFGAVNNLLTQMLNNA-GYVVDLVS-ASLSQALAAK----RGVRH--LY-RE-P---SQ-V---TQKYFAIF 204 (315)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHH-TCEEEEEC-SSCCHHHHHH----HTEEE--EE-SS-G---GG-C---CSCEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEE-ChhhHHHHHH----cCCCE--EE-cC-H---HH-h---CCCccEEE
Confidence 478899999964 88888999886 56999999 9888777754 44322 22 24 1 11 1 45688875
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEe
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 348 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~t 348 (420)
-....+ .+....++|+++|++.+..
T Consensus 205 d~~g~~---------------~~~~~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 205 DAVNSQ---------------NAAALVPSLKANGHIICIQ 229 (315)
T ss_dssp CC----------------------TTGGGEEEEEEEEEEC
T ss_pred ECCCch---------------hHHHHHHHhcCCCEEEEEe
Confidence 432221 2245678999999988753
No 422
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=64.90 E-value=23 Score=35.00 Aligned_cols=45 Identities=9% Similarity=-0.169 Sum_probs=34.8
Q ss_pred CCEEEEEcCCccHHHHHHHHhC-CCCe----EEEEeCChHHHHHHHHHhH
Q 014711 231 QPLVVDIGSGNGLFLLGMARKR-KDLN----FLGLEVNGKLVTHCRDSLQ 275 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~~-P~~~----viGiDis~~~i~~A~~~~~ 275 (420)
..+++|+-||.|.+...|-+.. +-.. +.++|+++.++..-+.+..
T Consensus 10 ~lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~ 59 (403)
T 4dkj_A 10 VIKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHS 59 (403)
T ss_dssp EEEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHC
T ss_pred cceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcC
Confidence 3579999999999998887662 1123 7889999999987777654
No 423
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=64.42 E-value=22 Score=34.25 Aligned_cols=95 Identities=13% Similarity=0.051 Sum_probs=59.7
Q ss_pred CCCEEEEEcC--CccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEE-EEEcChhhhhhhhhccCCCeEeE
Q 014711 230 AQPLVVDIGS--GNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGY-FIATNATSTFRSIVASYPGKLIL 306 (420)
Q Consensus 230 ~~~~vLDIGc--G~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~-~~~~Da~~~~~~~~~~~~~~~d~ 306 (420)
.+..||=+|+ |.|..++.+|+.. ..+++++. +++.++.++ +.|...+- ....|..+.+.+. .++.+|.
T Consensus 164 ~g~~VlV~Ga~G~vG~~a~qla~~~-Ga~Vi~~~-~~~~~~~~~----~lGa~~vi~~~~~~~~~~v~~~---t~g~~d~ 234 (371)
T 3gqv_A 164 KPVYVLVYGGSTATATVTMQMLRLS-GYIPIATC-SPHNFDLAK----SRGAEEVFDYRAPNLAQTIRTY---TKNNLRY 234 (371)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEE-CGGGHHHHH----HTTCSEEEETTSTTHHHHHHHH---TTTCCCE
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHC-CCEEEEEe-CHHHHHHHH----HcCCcEEEECCCchHHHHHHHH---ccCCccE
Confidence 4678999998 3789999999885 56899885 887766554 35543211 1112222222222 2345888
Q ss_pred EEEeCCCCCCCCcchhhhhhHHHHHHHHHhhc-cCCeEEEEE
Q 014711 307 VSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLL-VHDGKVFLQ 347 (420)
Q Consensus 307 i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~L-kpgG~l~~~ 347 (420)
++-.-.. +..+....+.| +++|++.+.
T Consensus 235 v~d~~g~--------------~~~~~~~~~~l~~~~G~iv~~ 262 (371)
T 3gqv_A 235 ALDCITN--------------VESTTFCFAAIGRAGGHYVSL 262 (371)
T ss_dssp EEESSCS--------------HHHHHHHHHHSCTTCEEEEES
T ss_pred EEECCCc--------------hHHHHHHHHHhhcCCCEEEEE
Confidence 8654222 25678888899 699998764
No 424
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=64.42 E-value=21 Score=33.13 Aligned_cols=90 Identities=19% Similarity=0.137 Sum_probs=58.9
Q ss_pred CCCEEEEEcC--CccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcCh-hhhhhhhhccCCCeEeE
Q 014711 230 AQPLVVDIGS--GNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNA-TSTFRSIVASYPGKLIL 306 (420)
Q Consensus 230 ~~~~vLDIGc--G~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da-~~~~~~~~~~~~~~~d~ 306 (420)
.+..||-+|+ |.|..++.+|+.. +.++++++.+++.++.+++ .|...+ +..+- .++ .+.+ ..+|.
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~----~ga~~~--~~~~~~~~~-~~~~----~~~d~ 192 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAM-GLRVLAAASRPEKLALPLA----LGAEEA--ATYAEVPER-AKAW----GGLDL 192 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSGGGSHHHHH----TTCSEE--EEGGGHHHH-HHHT----TSEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHh----cCCCEE--EECCcchhH-HHHh----cCceE
Confidence 4688999998 5688888888876 5699999999988776643 454322 21111 122 1111 45888
Q ss_pred EEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 307 VSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 307 i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
++- ... ..++...+.|+++|++.+.
T Consensus 193 vid-~g~---------------~~~~~~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 193 VLE-VRG---------------KEVEESLGLLAHGGRLVYI 217 (302)
T ss_dssp EEE-CSC---------------TTHHHHHTTEEEEEEEEEC
T ss_pred EEE-CCH---------------HHHHHHHHhhccCCEEEEE
Confidence 765 332 2346677899999998764
No 425
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=64.36 E-value=32 Score=32.56 Aligned_cols=110 Identities=16% Similarity=0.186 Sum_probs=61.3
Q ss_pred EEEEEcCCc-cHHHH-HHHHhCCCCeEEE-EeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 233 LVVDIGSGN-GLFLL-GMARKRKDLNFLG-LEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 233 ~vLDIGcG~-G~~~~-~lA~~~P~~~viG-iDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
+|.=||||. |...+ .+.+..|+..+++ +|.+++..+... ++.++. + -...|..+++ .+..+|.|++
T Consensus 4 rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~---~~~g~~-~-~~~~~~~~ll------~~~~~D~V~i 72 (344)
T 3mz0_A 4 RIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVV---EQYQLN-A-TVYPNDDSLL------ADENVDAVLV 72 (344)
T ss_dssp EEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHH---HHTTCC-C-EEESSHHHHH------HCTTCCEEEE
T ss_pred EEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHH---HHhCCC-C-eeeCCHHHHh------cCCCCCEEEE
Confidence 466789986 33333 3333568888886 588887654443 344431 1 2346666654 2456899988
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE---eCcHHHHHHHHHHHHHcCCc
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ---SDIEEVMLRMKQQFLEYGKG 367 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~---td~~~~~~~~~~~l~~~g~~ 367 (420)
.-|+.. -.+.+..+|+.|-.++++ +-.....+++.+..++.+..
T Consensus 73 ~tp~~~--------------h~~~~~~al~~Gk~vl~EKP~a~~~~e~~~l~~~a~~~g~~ 119 (344)
T 3mz0_A 73 TSWGPA--------------HESSVLKAIKAQKYVFCEKPLATTAEGCMRIVEEEIKVGKR 119 (344)
T ss_dssp CSCGGG--------------HHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHHSSC
T ss_pred CCCchh--------------HHHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHHCCE
Confidence 755443 122233456666555553 22334455566666666543
No 426
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=64.14 E-value=12 Score=35.92 Aligned_cols=93 Identities=15% Similarity=0.099 Sum_probs=59.7
Q ss_pred CCCEEEEEc--CCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEc---ChhhhhhhhhccCCCeE
Q 014711 230 AQPLVVDIG--SGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIAT---NATSTFRSIVASYPGKL 304 (420)
Q Consensus 230 ~~~~vLDIG--cG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~---Da~~~~~~~~~~~~~~~ 304 (420)
.+..||=+| .|.|..++.+|+.. +.+|+++|.+++.++.+++ .|... .+.. |..+.+.+.. ...+
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~----lGa~~--~~~~~~~~~~~~~~~~~---~~g~ 236 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARAF-GAEVYATAGSTGKCEACER----LGAKR--GINYRSEDFAAVIKAET---GQGV 236 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH----HTCSE--EEETTTSCHHHHHHHHH---SSCE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHh----cCCCE--EEeCCchHHHHHHHHHh---CCCc
Confidence 467899884 34688888888875 5699999999998877754 34332 1221 1211111111 3468
Q ss_pred eEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 305 ILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 305 d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
|.++-.... ..+....+.|+++|++.+.
T Consensus 237 Dvvid~~g~---------------~~~~~~~~~l~~~G~iv~~ 264 (353)
T 4dup_A 237 DIILDMIGA---------------AYFERNIASLAKDGCLSII 264 (353)
T ss_dssp EEEEESCCG---------------GGHHHHHHTEEEEEEEEEC
T ss_pred eEEEECCCH---------------HHHHHHHHHhccCCEEEEE
Confidence 888654221 2456678899999998764
No 427
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=63.97 E-value=35 Score=32.99 Aligned_cols=69 Identities=14% Similarity=0.180 Sum_probs=43.4
Q ss_pred EEEEEcCC-c-cHHHHHHHHhCCCCeEEE-EeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 233 LVVDIGSG-N-GLFLLGMARKRKDLNFLG-LEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 233 ~vLDIGcG-~-G~~~~~lA~~~P~~~viG-iDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
+|.=|||| . |..-+......|+..+++ +|.+++..+.+.+ +.+.+ ...|..+++. +..+|.|++
T Consensus 4 rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~---~~g~~----~~~~~~ell~------~~~vD~V~i 70 (387)
T 3moi_A 4 RFGICGLGFAGSVLMAPAMRHHPDAQIVAACDPNEDVRERFGK---EYGIP----VFATLAEMMQ------HVQMDAVYI 70 (387)
T ss_dssp EEEEECCSHHHHTTHHHHHHHCTTEEEEEEECSCHHHHHHHHH---HHTCC----EESSHHHHHH------HSCCSEEEE
T ss_pred EEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHH---HcCCC----eECCHHHHHc------CCCCCEEEE
Confidence 46779999 4 333344445678888875 5888876554433 34543 3567776642 346899998
Q ss_pred eCCCC
Q 014711 310 QCPNP 314 (420)
Q Consensus 310 ~fpdp 314 (420)
.-|+.
T Consensus 71 ~tp~~ 75 (387)
T 3moi_A 71 ASPHQ 75 (387)
T ss_dssp CSCGG
T ss_pred cCCcH
Confidence 75554
No 428
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=63.56 E-value=14 Score=35.45 Aligned_cols=71 Identities=14% Similarity=0.036 Sum_probs=40.5
Q ss_pred EEEEEcCCc-cHHHHHHHHhCCC-------CeEEE-EeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCe
Q 014711 233 LVVDIGSGN-GLFLLGMARKRKD-------LNFLG-LEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGK 303 (420)
Q Consensus 233 ~vLDIGcG~-G~~~~~lA~~~P~-------~~viG-iDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~ 303 (420)
+|-=||||. |..-+...+..|+ ..+++ +|.+++..+.+ +++.+... ...|..+++ .+..
T Consensus 8 rvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~---a~~~g~~~---~~~d~~~ll------~~~~ 75 (390)
T 4h3v_A 8 GIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAA---AGKLGWST---TETDWRTLL------ERDD 75 (390)
T ss_dssp EEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHH---HHHHTCSE---EESCHHHHT------TCTT
T ss_pred cEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHH---HHHcCCCc---ccCCHHHHh------cCCC
Confidence 466688875 3221111222232 25555 48888765544 44456543 356776664 3567
Q ss_pred EeEEEEeCCCCC
Q 014711 304 LILVSIQCPNPD 315 (420)
Q Consensus 304 ~d~i~~~fpdp~ 315 (420)
+|.|++.-|+.+
T Consensus 76 iDaV~I~tP~~~ 87 (390)
T 4h3v_A 76 VQLVDVCTPGDS 87 (390)
T ss_dssp CSEEEECSCGGG
T ss_pred CCEEEEeCChHH
Confidence 999999866654
No 429
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=62.34 E-value=31 Score=32.62 Aligned_cols=108 Identities=11% Similarity=0.078 Sum_probs=59.9
Q ss_pred CEEEEEcCCc-cHHHHHHHHhCCCCeEEE-EeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 232 PLVVDIGSGN-GLFLLGMARKRKDLNFLG-LEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 232 ~~vLDIGcG~-G~~~~~lA~~~P~~~viG-iDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
.+|.=||||. |...+....+.|+..+++ +|.+++..+.. +.+.+ +. ...|..+++ .+..+|.|++
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~---a~~~g---~~-~~~~~~~~l------~~~~~D~V~i 71 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRL---AEANG---AE-AVASPDEVF------ARDDIDGIVI 71 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHH---HHTTT---CE-EESSHHHHT------TCSCCCEEEE
T ss_pred eEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHH---HHHcC---Cc-eeCCHHHHh------cCCCCCEEEE
Confidence 4577799986 444444444578888885 68888765443 33334 22 345666553 3557899998
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE---eCcHHHHHHHHHHHHHcCC
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ---SDIEEVMLRMKQQFLEYGK 366 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~---td~~~~~~~~~~~l~~~g~ 366 (420)
.-|+.. -.+.+..+|+.|-.++++ +-.....+++.+..++.+.
T Consensus 72 ~tp~~~--------------h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~ 117 (344)
T 3euw_A 72 GSPTST--------------HVDLITRAVERGIPALCEKPIDLDIEMVRACKEKIGDGAS 117 (344)
T ss_dssp CSCGGG--------------HHHHHHHHHHTTCCEEECSCSCSCHHHHHHHHHHHGGGGG
T ss_pred eCCchh--------------hHHHHHHHHHcCCcEEEECCCCCCHHHHHHHHHHHHhcCC
Confidence 755543 112233455555545543 1223334455555555553
No 430
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=61.64 E-value=5.7 Score=39.82 Aligned_cols=46 Identities=20% Similarity=0.342 Sum_probs=35.0
Q ss_pred CCEEEEEcCCccHHHHHHHHhC----C-CCeEEEEeCChHHHHHHHHHhHH
Q 014711 231 QPLVVDIGSGNGLFLLGMARKR----K-DLNFLGLEVNGKLVTHCRDSLQL 276 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~~----P-~~~viGiDis~~~i~~A~~~~~~ 276 (420)
...++|+|.|+|.++..+.+.. + ..+|+-||+|+...+.=++++..
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 188 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLGA 188 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHHH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHhc
Confidence 3689999999999988876542 1 23799999999887766666543
No 431
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=61.48 E-value=49 Score=31.12 Aligned_cols=109 Identities=7% Similarity=-0.009 Sum_probs=62.5
Q ss_pred CEEEEEcCCccHHHHHHHHh--CCC-CeEEEEeCChHHH---HHHHHHhHHhCCCcEEEEEc-ChhhhhhhhhccCCCeE
Q 014711 232 PLVVDIGSGNGLFLLGMARK--RKD-LNFLGLEVNGKLV---THCRDSLQLSGITNGYFIAT-NATSTFRSIVASYPGKL 304 (420)
Q Consensus 232 ~~vLDIGcG~G~~~~~lA~~--~P~-~~viGiDis~~~i---~~A~~~~~~~~l~nv~~~~~-Da~~~~~~~~~~~~~~~ 304 (420)
..|.=||+|. .+..+|+. .-+ .+|+++|.+++.. +...+.+.+.|. .. +..+.. ...
T Consensus 25 m~IgvIG~G~--mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~------~~~s~~e~~--------~~a 88 (317)
T 4ezb_A 25 TTIAFIGFGE--AAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV------EPLDDVAGI--------ACA 88 (317)
T ss_dssp CEEEEECCSH--HHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC------EEESSGGGG--------GGC
T ss_pred CeEEEECccH--HHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC------CCCCHHHHH--------hcC
Confidence 4677888763 43333333 124 6899999997321 112222333343 22 333331 235
Q ss_pred eEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEe-CcHHHHHHHHHHHHHcCCc
Q 014711 305 ILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS-DIEEVMLRMKQQFLEYGKG 367 (420)
Q Consensus 305 d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~t-d~~~~~~~~~~~l~~~g~~ 367 (420)
|.|++..|++. ..+.++.+...|+||..++-.+ -.+...+.+.+.+.+.+..
T Consensus 89 DvVi~avp~~~-----------~~~~~~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~~ 141 (317)
T 4ezb_A 89 DVVLSLVVGAA-----------TKAVAASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGKGS 141 (317)
T ss_dssp SEEEECCCGGG-----------HHHHHHHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSSCE
T ss_pred CEEEEecCCHH-----------HHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCe
Confidence 88888766653 1245578888899988766543 3355566677777777654
No 432
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=60.32 E-value=52 Score=31.20 Aligned_cols=71 Identities=11% Similarity=0.136 Sum_probs=44.1
Q ss_pred CCEEEEEcCCc-cHHHHHHHHhC-CCCeEE-EEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEE
Q 014711 231 QPLVVDIGSGN-GLFLLGMARKR-KDLNFL-GLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILV 307 (420)
Q Consensus 231 ~~~vLDIGcG~-G~~~~~lA~~~-P~~~vi-GiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i 307 (420)
..+|.=||||. |...+....+. |+..++ .+|.+++..+.+.+ +.+. -...|..+++. +..+|.|
T Consensus 13 ~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~---~~~~----~~~~~~~~ll~------~~~~D~V 79 (354)
T 3q2i_A 13 KIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVE---RTGA----RGHASLTDMLA------QTDADIV 79 (354)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHH---HHCC----EEESCHHHHHH------HCCCSEE
T ss_pred cceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHH---HcCC----ceeCCHHHHhc------CCCCCEE
Confidence 45788899994 44333333344 788877 56999876655443 3443 23567766642 3468999
Q ss_pred EEeCCCC
Q 014711 308 SIQCPNP 314 (420)
Q Consensus 308 ~~~fpdp 314 (420)
++.-|+.
T Consensus 80 ~i~tp~~ 86 (354)
T 3q2i_A 80 ILTTPSG 86 (354)
T ss_dssp EECSCGG
T ss_pred EECCCcH
Confidence 8875554
No 433
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=59.37 E-value=24 Score=32.29 Aligned_cols=61 Identities=13% Similarity=0.097 Sum_probs=45.2
Q ss_pred CCEEEEEcCCccHHHHHHHHh--CCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhh
Q 014711 231 QPLVVDIGSGNGLFLLGMARK--RKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATST 292 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~--~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~ 292 (420)
+.++|=.|++.| ++.++|++ ..+.+|+.++.++...+.+.+.+...+..++.++.+|+.+.
T Consensus 12 ~k~vlITGas~G-IG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~ 74 (311)
T 3o26_A 12 RRCAVVTGGNKG-IGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDP 74 (311)
T ss_dssp CCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSC
T ss_pred CcEEEEecCCch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCc
Confidence 567887887644 55554444 23689999999999888877777666656899999999764
No 434
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=59.18 E-value=71 Score=30.51 Aligned_cols=72 Identities=10% Similarity=0.057 Sum_probs=43.4
Q ss_pred CCEEEEEcCCccHHH-HHHHHhCCCCeEEEE-eCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 231 QPLVVDIGSGNGLFL-LGMARKRKDLNFLGL-EVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~-~~lA~~~P~~~viGi-Dis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
..+|.=||||..... ..-+...|+..++++ |.+++..+.. +++.+... ...|..+++ .+..+|.|+
T Consensus 26 ~irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d~~~~~a~~~---a~~~~~~~---~~~~~~~ll------~~~~vD~V~ 93 (361)
T 3u3x_A 26 ELRFAAVGLNHNHIYGQVNCLLRAGARLAGFHEKDDALAAEF---SAVYADAR---RIATAEEIL------EDENIGLIV 93 (361)
T ss_dssp CCEEEEECCCSTTHHHHHHHHHHTTCEEEEEECSCHHHHHHH---HHHSSSCC---EESCHHHHH------TCTTCCEEE
T ss_pred CcEEEEECcCHHHHHHHHHHhhcCCcEEEEEEcCCHHHHHHH---HHHcCCCc---ccCCHHHHh------cCCCCCEEE
Confidence 357888999986532 111222488887765 8887755443 33444222 346776664 355799998
Q ss_pred EeCCCC
Q 014711 309 IQCPNP 314 (420)
Q Consensus 309 ~~fpdp 314 (420)
+.-|+.
T Consensus 94 I~tp~~ 99 (361)
T 3u3x_A 94 SAAVSS 99 (361)
T ss_dssp ECCCHH
T ss_pred EeCChH
Confidence 875544
No 435
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=58.72 E-value=95 Score=30.05 Aligned_cols=112 Identities=14% Similarity=0.131 Sum_probs=63.4
Q ss_pred CCEEEEEcCCccHHHHHHHHhCC-CCeEEEE-eCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 231 QPLVVDIGSGNGLFLLGMARKRK-DLNFLGL-EVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~~P-~~~viGi-Dis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
..+|.=||||-|.+=+...++.| +..++|+ |.+++ +|++.+++.|++ ...|..+++ + .+|.++
T Consensus 7 ~~rv~VvG~G~g~~h~~a~~~~~~~~elvav~~~~~~---~a~~~a~~~gv~----~~~~~~~l~-------~-~~D~v~ 71 (372)
T 4gmf_A 7 KQRVLIVGAKFGEMYLNAFMQPPEGLELVGLLAQGSA---RSRELAHAFGIP----LYTSPEQIT-------G-MPDIAC 71 (372)
T ss_dssp CEEEEEECSTTTHHHHHTTSSCCTTEEEEEEECCSSH---HHHHHHHHTTCC----EESSGGGCC-------S-CCSEEE
T ss_pred CCEEEEEehHHHHHHHHHHHhCCCCeEEEEEECCCHH---HHHHHHHHhCCC----EECCHHHHh-------c-CCCEEE
Confidence 45788899998876444444455 4688876 77765 455555666764 346776652 2 478888
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeC-cHHHHHHHHHHHHHcCCc
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSD-IEEVMLRMKQQFLEYGKG 367 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td-~~~~~~~~~~~l~~~g~~ 367 (420)
+.-|++.+...| .+.+.++|+.|=-++++-. +.+-.+++.+..+++|..
T Consensus 72 i~~p~~~h~~~~----------~~~a~~al~aGkhVl~EKPl~~~ea~~l~~~A~~~g~~ 121 (372)
T 4gmf_A 72 IVVRSTVAGGAG----------TQLARHFLARGVHVIQEHPLHPDDISSLQTLAQEQGCC 121 (372)
T ss_dssp ECCC--CTTSHH----------HHHHHHHHHTTCEEEEESCCCHHHHHHHHHHHHHHTCC
T ss_pred EECCCcccchhH----------HHHHHHHHHcCCcEEEecCCCHHHHHHHHHHHHHcCCE
Confidence 877776543322 2334445555555555421 122344555555566544
No 436
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=58.51 E-value=28 Score=32.89 Aligned_cols=110 Identities=10% Similarity=-0.064 Sum_probs=60.0
Q ss_pred CEEEEEcCCc-cHHHHHHHHhCCCCeEEEE-eCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 232 PLVVDIGSGN-GLFLLGMARKRKDLNFLGL-EVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 232 ~~vLDIGcG~-G~~~~~lA~~~P~~~viGi-Dis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
.+|.=||||. |...+....+.|+..++++ |.+++..+.+ +.+.+... ...|..+++ .+..+|.|++
T Consensus 6 ~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~---~~~~~~~~---~~~~~~~ll------~~~~~D~V~i 73 (330)
T 3e9m_A 6 IRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQKM---AKELAIPV---AYGSYEELC------KDETIDIIYI 73 (330)
T ss_dssp EEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHH---HHHTTCCC---CBSSHHHHH------HCTTCSEEEE
T ss_pred EEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHH---HHHcCCCc---eeCCHHHHh------cCCCCCEEEE
Confidence 4577789985 3333333444688888864 8887665443 33445421 235665553 2456899998
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE---eCcHHHHHHHHHHHHHcCCc
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ---SDIEEVMLRMKQQFLEYGKG 367 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~---td~~~~~~~~~~~l~~~g~~ 367 (420)
.-|+.. | .+.+..+|+.|-.++++ +-...-.+++.+..++.+..
T Consensus 74 ~tp~~~----h----------~~~~~~al~~gk~vl~EKP~~~~~~e~~~l~~~a~~~g~~ 120 (330)
T 3e9m_A 74 PTYNQG----H----------YSAAKLALSQGKPVLLEKPFTLNAAEAEELFAIAQEQGVF 120 (330)
T ss_dssp CCCGGG----H----------HHHHHHHHHTTCCEEECSSCCSSHHHHHHHHHHHHHTTCC
T ss_pred cCCCHH----H----------HHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCe
Confidence 755543 1 12233445555445443 12333345566666665543
No 437
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=58.41 E-value=76 Score=31.63 Aligned_cols=124 Identities=14% Similarity=0.077 Sum_probs=68.4
Q ss_pred CEEEEEcCCc-cHH-HHHHHHhCCCCeEEEEeCChHHHHHHHH------------HhHHhCCCcEEEEEcChhhhhhhhh
Q 014711 232 PLVVDIGSGN-GLF-LLGMARKRKDLNFLGLEVNGKLVTHCRD------------SLQLSGITNGYFIATNATSTFRSIV 297 (420)
Q Consensus 232 ~~vLDIGcG~-G~~-~~~lA~~~P~~~viGiDis~~~i~~A~~------------~~~~~~l~nv~~~~~Da~~~~~~~~ 297 (420)
..|.=||+|. |.. +..|++..++.+|+++|++++.++..++ ...+....++++ ..|..+.+
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~-t~~~~e~~---- 80 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFF-STNIDDAI---- 80 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEE-ESCHHHHH----
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEE-ECCHHHHH----
Confidence 3577789885 332 3445655456789999999988766432 111100123443 23433221
Q ss_pred ccCCCeEeEEEEeCCCCCCCCc-----chhhhhhHHHHHHHHHhhccCCeEEEEE-eCcHHHHHHHHHHHHHcC
Q 014711 298 ASYPGKLILVSIQCPNPDFNRP-----EHRWRMVQRSLVEAVSDLLVHDGKVFLQ-SDIEEVMLRMKQQFLEYG 365 (420)
Q Consensus 298 ~~~~~~~d~i~~~fpdp~~k~~-----~~k~Rl~~~~~l~~i~~~LkpgG~l~~~-td~~~~~~~~~~~l~~~g 365 (420)
...|.|++..|+|...+. .+.-+.+ ...++.+...|++|..++.. |-.....+.+.+.+++.+
T Consensus 81 ----~~aDvViiaVptp~~~~~v~~~~~~dl~~v-~~~~~~i~~~l~~g~iVV~~STv~~g~~~~l~~~l~~~~ 149 (467)
T 2q3e_A 81 ----KEADLVFISVNTPTKTYGMGKGRAADLKYI-EACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANT 149 (467)
T ss_dssp ----HHCSEEEECCCCCBCCSSTTTTTSBCCHHH-HHHHHHHHHTCCSEEEEEECSCCCTTHHHHHHHHHHHTC
T ss_pred ----hcCCEEEEEcCCchhhccccccCCCcHHHH-HHHHHHHHhhCCCCCEEEECCcCCchHHHHHHHHHHHhC
Confidence 146888888777753221 0100111 35667788888887766554 333344556677777654
No 438
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=58.15 E-value=53 Score=30.43 Aligned_cols=107 Identities=14% Similarity=0.044 Sum_probs=64.3
Q ss_pred CEEEEEcCCc-cHH-HHHHHHhCCCCeEEE-EeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 232 PLVVDIGSGN-GLF-LLGMARKRKDLNFLG-LEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 232 ~~vLDIGcG~-G~~-~~~lA~~~P~~~viG-iDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
.+|.=||||. |.. ......+.|+..+++ +|.+++..+...+ +.+... ..|..+++ . .+|.|+
T Consensus 7 ~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~---~~~~~~----~~~~~~ll-------~-~~D~V~ 71 (308)
T 3uuw_A 7 IKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPNKVKREKICS---DYRIMP----FDSIESLA-------K-KCDCIF 71 (308)
T ss_dssp CEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSCHHHHHHHHH---HHTCCB----CSCHHHHH-------T-TCSEEE
T ss_pred CcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHH---HcCCCC----cCCHHHHH-------h-cCCEEE
Confidence 5678899985 432 344444568888885 7998876554433 345432 45555552 3 689999
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE---eCcHHHHHHHHHHHHHcCCc
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ---SDIEEVMLRMKQQFLEYGKG 367 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~---td~~~~~~~~~~~l~~~g~~ 367 (420)
+.-|+.. -.+.+..+|+.|-.++++ +....-.+++.+..++.+..
T Consensus 72 i~tp~~~--------------h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~g~~ 119 (308)
T 3uuw_A 72 LHSSTET--------------HYEIIKILLNLGVHVYVDKPLASTVSQGEELIELSTKKNLN 119 (308)
T ss_dssp ECCCGGG--------------HHHHHHHHHHTTCEEEECSSSSSSHHHHHHHHHHHHHHTCC
T ss_pred EeCCcHh--------------HHHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHcCCE
Confidence 8755442 122334556666666654 23444566677777777654
No 439
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=57.57 E-value=74 Score=30.23 Aligned_cols=113 Identities=8% Similarity=-0.040 Sum_probs=64.8
Q ss_pred CEEEEEcCCc-cHHHHHHHHhCCCCeEEE-EeCChHHHHHHHHHhHHhCCC-cEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 232 PLVVDIGSGN-GLFLLGMARKRKDLNFLG-LEVNGKLVTHCRDSLQLSGIT-NGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 232 ~~vLDIGcG~-G~~~~~lA~~~P~~~viG-iDis~~~i~~A~~~~~~~~l~-nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
.+|.=||||. |...+......|+..+++ +|.+++..+ +.+.+.++. .+. ...|..+++ .+..+|.|+
T Consensus 7 ~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~~~~~~~---~~a~~~~~~~~~~-~~~~~~~ll------~~~~~D~V~ 76 (362)
T 1ydw_A 7 IRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAK---AFATANNYPESTK-IHGSYESLL------EDPEIDALY 76 (362)
T ss_dssp EEEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHH---HHHHHTTCCTTCE-EESSHHHHH------HCTTCCEEE
T ss_pred eEEEEECchHHHHHHHHHHhhCCCcEEEEEEcCCHHHHH---HHHHHhCCCCCCe-eeCCHHHHh------cCCCCCEEE
Confidence 4677899986 433333344567777764 688876543 334444542 222 345666553 244689999
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEe---CcHHHHHHHHHHHHHcCCce
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS---DIEEVMLRMKQQFLEYGKGK 368 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~t---d~~~~~~~~~~~l~~~g~~~ 368 (420)
+.-|+.. -...+..+|+.|=-++++- -.....+++.+..++.+...
T Consensus 77 i~tp~~~--------------h~~~~~~al~aGk~V~~EKP~a~~~~e~~~l~~~a~~~g~~~ 125 (362)
T 1ydw_A 77 VPLPTSL--------------HVEWAIKAAEKGKHILLEKPVAMNVTEFDKIVDACEANGVQI 125 (362)
T ss_dssp ECCCGGG--------------HHHHHHHHHTTTCEEEECSSCSSSHHHHHHHHHHHHTTTCCE
T ss_pred EcCChHH--------------HHHHHHHHHHCCCeEEEecCCcCCHHHHHHHHHHHHHcCCEE
Confidence 8755442 1233445677776666642 23444666777777777543
No 440
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=56.53 E-value=62 Score=24.47 Aligned_cols=105 Identities=8% Similarity=-0.024 Sum_probs=57.3
Q ss_pred CCEEEEEcCCccHHHHHHHHh---CCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhh--hhhhhccCCCeEe
Q 014711 231 QPLVVDIGSGNGLFLLGMARK---RKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATST--FRSIVASYPGKLI 305 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~---~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~--~~~~~~~~~~~~d 305 (420)
...|+=+|+ |..+..+++. ....+++++|.+++.++... . .++.++..|..+. +.+.+ ..+|
T Consensus 5 ~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~---~~~~~~~~d~~~~~~~~~~~----~~~d 71 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----R---MGVATKQVDAKDEAGLAKAL----GGFD 71 (118)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----T---TTCEEEECCTTCHHHHHHHT----TTCS
T ss_pred cCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----h---CCCcEEEecCCCHHHHHHHH----cCCC
Confidence 356888898 5555544433 33378999999988766543 1 2456777777653 12222 2578
Q ss_pred EEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHHHHHHHHHHH
Q 014711 306 LVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFL 362 (420)
Q Consensus 306 ~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~~~~~~~~l~ 362 (420)
.|+..- |. . ....++. ..++.|-..+..+......+.+.++.+
T Consensus 72 ~vi~~~--~~-----~----~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~~ 114 (118)
T 3ic5_A 72 AVISAA--PF-----F----LTPIIAK---AAKAAGAHYFDLTEDVAATNAVRALVE 114 (118)
T ss_dssp EEEECS--CG-----G----GHHHHHH---HHHHTTCEEECCCSCHHHHHHHHHHHH
T ss_pred EEEECC--Cc-----h----hhHHHHH---HHHHhCCCEEEecCcHHHHHHHHHHHH
Confidence 876653 22 0 1113333 334555555444544455555554433
No 441
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=56.49 E-value=20 Score=33.56 Aligned_cols=89 Identities=12% Similarity=0.010 Sum_probs=58.5
Q ss_pred EEEEcC--CccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEEeC
Q 014711 234 VVDIGS--GNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQC 311 (420)
Q Consensus 234 vLDIGc--G~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~~f 311 (420)
||=+|+ |.|..++.+|+.. ..++++++.+++.++.+++ .|...+ +-..+... ... + ....+|.++-..
T Consensus 150 VlV~Ga~G~vG~~aiqla~~~-Ga~Vi~~~~~~~~~~~~~~----lGa~~v-i~~~~~~~-~~~-~--~~~~~d~v~d~~ 219 (324)
T 3nx4_A 150 VVVTGASGGVGSTAVALLHKL-GYQVAAVSGRESTHGYLKS----LGANRI-LSRDEFAE-SRP-L--EKQLWAGAIDTV 219 (324)
T ss_dssp EEESSTTSHHHHHHHHHHHHT-TCCEEEEESCGGGHHHHHH----HTCSEE-EEGGGSSC-CCS-S--CCCCEEEEEESS
T ss_pred EEEECCCcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHh----cCCCEE-EecCCHHH-HHh-h--cCCCccEEEECC
Confidence 888887 6788899999886 5699999999998887754 454321 21111111 011 1 234678765431
Q ss_pred CCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 312 PNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 312 pdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
....+....++|+++|++.+.
T Consensus 220 ---------------g~~~~~~~~~~l~~~G~iv~~ 240 (324)
T 3nx4_A 220 ---------------GDKVLAKVLAQMNYGGCVAAC 240 (324)
T ss_dssp ---------------CHHHHHHHHHTEEEEEEEEEC
T ss_pred ---------------CcHHHHHHHHHHhcCCEEEEE
Confidence 124778889999999999874
No 442
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=55.68 E-value=20 Score=36.00 Aligned_cols=122 Identities=12% Similarity=0.097 Sum_probs=68.1
Q ss_pred CEEEEEcCCc-cHH-HHHHHHhCCCCeEEEEeCChHHHHHHHHHhHH---hC----------CCcEEEEEcChhhhhhhh
Q 014711 232 PLVVDIGSGN-GLF-LLGMARKRKDLNFLGLEVNGKLVTHCRDSLQL---SG----------ITNGYFIATNATSTFRSI 296 (420)
Q Consensus 232 ~~vLDIGcG~-G~~-~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~---~~----------l~nv~~~~~Da~~~~~~~ 296 (420)
.++-=||+|. |.- +..||+. +.+|+++|++++.++..++.... .+ ..++++ ..|..+..
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~--G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~-ttd~~ea~--- 82 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDF--GHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSF-TTDLAEGV--- 82 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEE-ESCHHHHH---
T ss_pred eEEEEEcCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEE-ECCHHHHH---
Confidence 4556666664 222 2233443 57899999999887766442100 00 123443 34443321
Q ss_pred hccCCCeEeEEEEeCCCCCCC-CcchhhhhhHHHHHHHHHhhccCCeEEEEEeC-cHHHHHHHHHHHHHcC
Q 014711 297 VASYPGKLILVSIQCPNPDFN-RPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSD-IEEVMLRMKQQFLEYG 365 (420)
Q Consensus 297 ~~~~~~~~d~i~~~fpdp~~k-~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td-~~~~~~~~~~~l~~~g 365 (420)
...|.+++..|.|.-. +..+.-+.+ .+.++.+...|++|-.++..|- .+...+.+.+.+.+.+
T Consensus 83 -----~~aDvvii~Vptp~~~~~~~~Dl~~v-~~v~~~i~~~l~~g~iVV~~STv~pgtt~~l~~~l~e~~ 147 (446)
T 4a7p_A 83 -----KDADAVFIAVGTPSRRGDGHADLSYV-FAAAREIAENLTKPSVIVTKSTVPVGTGDEVERIIAEVA 147 (446)
T ss_dssp -----TTCSEEEECCCCCBCTTTCCBCTHHH-HHHHHHHHHSCCSCCEEEECSCCCTTHHHHHHHHHHHHS
T ss_pred -----hcCCEEEEEcCCCCccccCCccHHHH-HHHHHHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHhC
Confidence 1358888887887521 221111112 3667888899999988877652 3455566777776643
No 443
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=55.20 E-value=30 Score=32.18 Aligned_cols=109 Identities=20% Similarity=0.214 Sum_probs=62.9
Q ss_pred CEEEEEcCCccHHHHHHHHh--CCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 232 PLVVDIGSGNGLFLLGMARK--RKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 232 ~~vLDIGcG~G~~~~~lA~~--~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
.+|.=||+|. .+..+|+. .-+.+|+++|.+++.++.+.+ .|.. ....+..+. -...|.|++
T Consensus 8 ~~I~iIG~G~--mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~----~g~~---~~~~~~~e~--------~~~aDvvi~ 70 (303)
T 3g0o_A 8 FHVGIVGLGS--MGMGAARSCLRAGLSTWGADLNPQACANLLA----EGAC---GAAASAREF--------AGVVDALVI 70 (303)
T ss_dssp CEEEEECCSH--HHHHHHHHHHHTTCEEEEECSCHHHHHHHHH----TTCS---EEESSSTTT--------TTTCSEEEE
T ss_pred CeEEEECCCH--HHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----cCCc---cccCCHHHH--------HhcCCEEEE
Confidence 4677788764 33333332 225789999999987766543 2332 123344332 124688888
Q ss_pred eCCCCCCCCcchhhhhhHHHHH---HHHHhhccCCeEEEEEe-CcHHHHHHHHHHHHHcCCc
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLV---EAVSDLLVHDGKVFLQS-DIEEVMLRMKQQFLEYGKG 367 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l---~~i~~~LkpgG~l~~~t-d~~~~~~~~~~~l~~~g~~ 367 (420)
..|++. .+ +..+ +.+...|+||..++-.+ -.+...+.+.+.+.+.+..
T Consensus 71 ~vp~~~---------~~-~~v~~~~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~ 122 (303)
T 3g0o_A 71 LVVNAA---------QV-RQVLFGEDGVAHLMKPGSAVMVSSTISSADAQEIAAALTALNLN 122 (303)
T ss_dssp CCSSHH---------HH-HHHHC--CCCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTTTCE
T ss_pred ECCCHH---------HH-HHHHhChhhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCe
Confidence 776652 01 1333 45567788888776543 3344455566677776654
No 444
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=54.71 E-value=62 Score=31.90 Aligned_cols=73 Identities=10% Similarity=-0.068 Sum_probs=43.6
Q ss_pred CEEEEEcC----Cc-cHHHHHHHHhC-CCCeEEE-EeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeE
Q 014711 232 PLVVDIGS----GN-GLFLLGMARKR-KDLNFLG-LEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKL 304 (420)
Q Consensus 232 ~~vLDIGc----G~-G~~~~~lA~~~-P~~~viG-iDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~ 304 (420)
.+|.=||| |. |..-+...+.. |+..+++ +|.+++..+.+ +++.+.+++. ...|..+++ .+..+
T Consensus 21 irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~---a~~~g~~~~~-~~~~~~~ll------~~~~v 90 (438)
T 3btv_A 21 IRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIAT---IQRLKLSNAT-AFPTLESFA------SSSTI 90 (438)
T ss_dssp EEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECSSHHHHHHH---HHHTTCTTCE-EESSHHHHH------HCSSC
T ss_pred CEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHH---HHHcCCCcce-eeCCHHHHh------cCCCC
Confidence 46888999 54 33333334455 8887764 58887765443 3345554332 245666654 24568
Q ss_pred eEEEEeCCCC
Q 014711 305 ILVSIQCPNP 314 (420)
Q Consensus 305 d~i~~~fpdp 314 (420)
|.|++.-|+.
T Consensus 91 D~V~i~tp~~ 100 (438)
T 3btv_A 91 DMIVIAIQVA 100 (438)
T ss_dssp SEEEECSCHH
T ss_pred CEEEEeCCcH
Confidence 9999875554
No 445
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=54.70 E-value=38 Score=30.47 Aligned_cols=79 Identities=15% Similarity=0.155 Sum_probs=51.7
Q ss_pred CCCEEEEEcC-Ccc--HH-HHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhh--hhhhc---cC
Q 014711 230 AQPLVVDIGS-GNG--LF-LLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTF--RSIVA---SY 300 (420)
Q Consensus 230 ~~~~vLDIGc-G~G--~~-~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~--~~~~~---~~ 300 (420)
++.++|=.|. |+| .. +..|+++ +.+|+.++.+++.++.+.+.+.+.+..++.++.+|+.+.. ...+. ..
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 98 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLE--GADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEK 98 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHC--CCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence 3567888886 543 33 3334444 6899999999998888877776555568999999998642 11111 01
Q ss_pred CCeEeEEEEe
Q 014711 301 PGKLILVSIQ 310 (420)
Q Consensus 301 ~~~~d~i~~~ 310 (420)
-+.+|.++.+
T Consensus 99 ~g~id~li~~ 108 (266)
T 3o38_A 99 AGRLDVLVNN 108 (266)
T ss_dssp HSCCCEEEEC
T ss_pred hCCCcEEEEC
Confidence 1367887654
No 446
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=54.60 E-value=1.4e+02 Score=29.50 Aligned_cols=119 Identities=11% Similarity=0.065 Sum_probs=65.5
Q ss_pred EEEEEcCCccHHHHHHHHh--CCCCeEEEEeCChHHHHHHHHHhHH---hC----------CCcEEEEEcChhhhhhhhh
Q 014711 233 LVVDIGSGNGLFLLGMARK--RKDLNFLGLEVNGKLVTHCRDSLQL---SG----------ITNGYFIATNATSTFRSIV 297 (420)
Q Consensus 233 ~vLDIGcG~G~~~~~lA~~--~P~~~viGiDis~~~i~~A~~~~~~---~~----------l~nv~~~~~Da~~~~~~~~ 297 (420)
.|.=||+| ..+..+|.. .-+.+|+++|++++.++..++.... .+ ..++++ ..|..+.+
T Consensus 4 kI~VIG~G--~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~-t~d~~ea~---- 76 (450)
T 3gg2_A 4 DIAVVGIG--YVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRF-GTEIEQAV---- 76 (450)
T ss_dssp EEEEECCS--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEE-ESCHHHHG----
T ss_pred EEEEECcC--HHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEE-ECCHHHHH----
Confidence 45567775 444443333 1257899999999988776542100 00 123443 23443321
Q ss_pred ccCCCeEeEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCc-HHHHHHHHHHHHH
Q 014711 298 ASYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI-EEVMLRMKQQFLE 363 (420)
Q Consensus 298 ~~~~~~~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~-~~~~~~~~~~l~~ 363 (420)
...|.|++.-|.|......+.-+.+ .+.++.+...|++|-.++..+-. +...+.+.+.+.+
T Consensus 77 ----~~aDvViiaVptp~~~~~~~dl~~v-~~v~~~i~~~l~~g~iVV~~STv~pgt~~~l~~~l~~ 138 (450)
T 3gg2_A 77 ----PEADIIFIAVGTPAGEDGSADMSYV-LDAARSIGRAMSRYILIVTKSTVPVGSYRLIRKAIQE 138 (450)
T ss_dssp ----GGCSEEEECCCCCBCTTSSBCCHHH-HHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred ----hcCCEEEEEcCCCcccCCCcChHHH-HHHHHHHHhhCCCCCEEEEeeeCCCcchHHHHHHHHH
Confidence 2468888887777532222211112 36778888999998877765422 3344455555554
No 447
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=54.57 E-value=44 Score=30.60 Aligned_cols=61 Identities=16% Similarity=0.236 Sum_probs=45.8
Q ss_pred CCCEEEEEcCCccHHHHHHHHhC--CCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhh
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKR--KDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATST 292 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~--P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~ 292 (420)
++.++|=-|.++|- +..+|+++ -..+|+.+|.+++.++.+.+.+...+ .++.++++|+.+.
T Consensus 6 ~gKvalVTGas~GI-G~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g-~~~~~~~~Dvt~~ 68 (254)
T 4fn4_A 6 KNKVVIVTGAGSGI-GRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMG-KEVLGVKADVSKK 68 (254)
T ss_dssp TTCEEEEETTTSHH-HHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTSH
T ss_pred CCCEEEEeCCCCHH-HHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC-CcEEEEEccCCCH
Confidence 46778888877663 44444331 37899999999999998888887766 4689999999864
No 448
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=54.56 E-value=44 Score=31.15 Aligned_cols=107 Identities=12% Similarity=0.015 Sum_probs=60.8
Q ss_pred CEEEEEcCCc-cHHHHHHHHhCCCCeEE-EEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 232 PLVVDIGSGN-GLFLLGMARKRKDLNFL-GLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 232 ~~vLDIGcG~-G~~~~~lA~~~P~~~vi-GiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
.+|.=||||. |...+....+.|+..++ .+|.+++..+.+.+ .+. ...|..+++ .+..+|.|++
T Consensus 11 ~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~~~~~~~~~~~--------~~~-~~~~~~~~l------~~~~~D~V~i 75 (315)
T 3c1a_A 11 VRLALIGAGRWGKNYIRTIAGLPGAALVRLASSNPDNLALVPP--------GCV-IESDWRSVV------SAPEVEAVII 75 (315)
T ss_dssp EEEEEEECTTTTTTHHHHHHHCTTEEEEEEEESCHHHHTTCCT--------TCE-EESSTHHHH------TCTTCCEEEE
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHh--------hCc-ccCCHHHHh------hCCCCCEEEE
Confidence 5688899986 44434444456777655 67988765432211 122 345555543 2456899998
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE---eCcHHHHHHHHHHHHHcCCc
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ---SDIEEVMLRMKQQFLEYGKG 367 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~---td~~~~~~~~~~~l~~~g~~ 367 (420)
.-|+.+ ....+..+|+.|-.++++ +-.....+++.+..++.+..
T Consensus 76 ~tp~~~--------------h~~~~~~al~~Gk~v~~eKP~~~~~~~~~~l~~~a~~~g~~ 122 (315)
T 3c1a_A 76 ATPPAT--------------HAEITLAAIASGKAVLVEKPLTLDLAEAEAVAAAAKATGVM 122 (315)
T ss_dssp ESCGGG--------------HHHHHHHHHHTTCEEEEESSSCSCHHHHHHHHHHHHHHCCC
T ss_pred eCChHH--------------HHHHHHHHHHCCCcEEEcCCCcCCHHHHHHHHHHHHHcCCE
Confidence 865543 122333456666556555 12344455677777777654
No 449
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=54.38 E-value=89 Score=29.80 Aligned_cols=106 Identities=16% Similarity=0.070 Sum_probs=58.8
Q ss_pred CEEEEEcCCc-cH-HHHHHHHhCCCCeEEEE-eCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 232 PLVVDIGSGN-GL-FLLGMARKRKDLNFLGL-EVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 232 ~~vLDIGcG~-G~-~~~~lA~~~P~~~viGi-Dis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
.+|.=||||. |. +.....+..|+..++++ |.+++.+. + ..+ ++. ...|..+++ .+..+|.|+
T Consensus 8 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~---~---~~~--~~~-~~~~~~~ll------~~~~~D~V~ 72 (364)
T 3e82_A 8 INIALIGYGFVGKTFHAPLIRSVPGLNLAFVASRDEEKVK---R---DLP--DVT-VIASPEAAV------QHPDVDLVV 72 (364)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHH---H---HCT--TSE-EESCHHHHH------TCTTCSEEE
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHH---h---hCC--CCc-EECCHHHHh------cCCCCCEEE
Confidence 4688899987 43 24445566788888765 88885432 1 121 222 246666664 356799999
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE---eCcHHHHHHHHHHHHHcCC
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ---SDIEEVMLRMKQQFLEYGK 366 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~---td~~~~~~~~~~~l~~~g~ 366 (420)
+.-|+.+ | .+.+..+|+.|=-++++ +-.....+++.+..++.+.
T Consensus 73 i~tp~~~----H----------~~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~ 119 (364)
T 3e82_A 73 IASPNAT----H----------APLARLALNAGKHVVVDKPFTLDMQEARELIALAEEKQR 119 (364)
T ss_dssp ECSCGGG----H----------HHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTC
T ss_pred EeCChHH----H----------HHHHHHHHHCCCcEEEeCCCcCCHHHHHHHHHHHHHhCC
Confidence 8755543 1 12233445555444443 1223334455555555553
No 450
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=54.28 E-value=22 Score=33.42 Aligned_cols=91 Identities=14% Similarity=0.102 Sum_probs=56.3
Q ss_pred EEEEEcC--CccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcCh-hhhhhhhhccCCCeEeEEEE
Q 014711 233 LVVDIGS--GNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNA-TSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 233 ~vLDIGc--G~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da-~~~~~~~~~~~~~~~d~i~~ 309 (420)
.||=+|+ |.|..++.+|+.. ..++++++.+++.++.+++ .|...+ +-..+. .+.... + ....+|.++-
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~-Ga~vi~~~~~~~~~~~~~~----lGa~~~-i~~~~~~~~~~~~-~--~~~~~d~vid 222 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKR-GYTVEASTGKAAEHDYLRV----LGAKEV-LAREDVMAERIRP-L--DKQRWAAAVD 222 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCTTCHHHHHH----TTCSEE-EECC----------C--CSCCEEEEEE
T ss_pred eEEEecCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHH----cCCcEE-EecCCcHHHHHHH-h--cCCcccEEEE
Confidence 6899997 6688888999876 5689999999887777643 454322 111111 111111 1 1346888765
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
.... ..+....+.|+++|++.+.
T Consensus 223 ~~g~---------------~~~~~~~~~l~~~G~~v~~ 245 (328)
T 1xa0_A 223 PVGG---------------RTLATVLSRMRYGGAVAVS 245 (328)
T ss_dssp CSTT---------------TTHHHHHHTEEEEEEEEEC
T ss_pred CCcH---------------HHHHHHHHhhccCCEEEEE
Confidence 4221 2356677899999999874
No 451
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=54.07 E-value=36 Score=34.71 Aligned_cols=99 Identities=9% Similarity=0.009 Sum_probs=58.7
Q ss_pred EEEEEcCCccHHHHHHHHhC--CCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEEe
Q 014711 233 LVVDIGSGNGLFLLGMARKR--KDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQ 310 (420)
Q Consensus 233 ~vLDIGcG~G~~~~~lA~~~--P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~~ 310 (420)
.++=+ |.|.++..+++.. -+..|+.+|.+++.++.+++. -++.++++|+.+. ..+-...-...+.+.+.
T Consensus 129 hviI~--G~g~~g~~la~~L~~~~~~vvvid~~~~~~~~~~~~------~~~~~i~Gd~~~~-~~L~~a~i~~a~~vi~t 199 (565)
T 4gx0_A 129 HILIF--GIDPITRTLIRKLESRNHLFVVVTDNYDQALHLEEQ------EGFKVVYGSPTDA-HVLAGLRVAAARSIIAN 199 (565)
T ss_dssp CEEEE--SCCHHHHHHHHHTTTTTCCEEEEESCHHHHHHHHHS------CSSEEEESCTTCH-HHHHHTTGGGCSEEEEC
T ss_pred eEEEE--CCChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHh------cCCeEEEeCCCCH-HHHHhcCcccCCEEEEe
Confidence 34444 5567777777763 357899999999988766542 1468999999774 11111122456777663
Q ss_pred CCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHH
Q 014711 311 CPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEV 353 (420)
Q Consensus 311 fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~ 353 (420)
..|. .+ -.+....+.+. ...++.....+.+
T Consensus 200 ~~D~-----------~n-~~~~~~ar~~~-~~~iiar~~~~~~ 229 (565)
T 4gx0_A 200 LSDP-----------DN-ANLCLTVRSLC-QTPIIAVVKEPVH 229 (565)
T ss_dssp SCHH-----------HH-HHHHHHHHTTC-CCCEEEECSSGGG
T ss_pred CCcH-----------HH-HHHHHHHHHhc-CceEEEEECCHHH
Confidence 2221 11 23333456666 6677766655544
No 452
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=53.66 E-value=37 Score=30.98 Aligned_cols=79 Identities=14% Similarity=0.090 Sum_probs=51.3
Q ss_pred CCEEEEEcCCccHHHHHHHHh--CCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhh--hhhhcc---CCCe
Q 014711 231 QPLVVDIGSGNGLFLLGMARK--RKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTF--RSIVAS---YPGK 303 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~--~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~--~~~~~~---~~~~ 303 (420)
+.++|=.|++ |.++..+++. .-+.+|++++.+++.++...+.+...+..++.++.+|+.+.. ...+.. .-+.
T Consensus 28 ~k~vlITGas-ggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~ 106 (286)
T 1xu9_A 28 GKKVIVTGAS-KGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGG 106 (286)
T ss_dssp TCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTS
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 5678888864 4555555443 136799999999988877766666556557899999987641 111110 0136
Q ss_pred EeEEEEe
Q 014711 304 LILVSIQ 310 (420)
Q Consensus 304 ~d~i~~~ 310 (420)
+|.++.+
T Consensus 107 iD~li~n 113 (286)
T 1xu9_A 107 LDMLILN 113 (286)
T ss_dssp CSEEEEC
T ss_pred CCEEEEC
Confidence 7887654
No 453
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=53.47 E-value=32 Score=34.46 Aligned_cols=106 Identities=20% Similarity=0.139 Sum_probs=57.8
Q ss_pred CCEEEEEcCCccHH--HHHHHHhCCCCeEEEEeCChHHHHHHHHH------------hHH-hCCCcEEEEEcChhhhhhh
Q 014711 231 QPLVVDIGSGNGLF--LLGMARKRKDLNFLGLEVNGKLVTHCRDS------------LQL-SGITNGYFIATNATSTFRS 295 (420)
Q Consensus 231 ~~~vLDIGcG~G~~--~~~lA~~~P~~~viGiDis~~~i~~A~~~------------~~~-~~l~nv~~~~~Da~~~~~~ 295 (420)
...|.=||+|.=.. +..+|+. +.+|+|+|++++.++..++- +.+ ..-.+++| ..|..+.+
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~--G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~-tt~~~~ai-- 95 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALL--GHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSF-AESAEEAV-- 95 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH--TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE-CSSHHHHH--
T ss_pred CCEEEEEccCHHHHHHHHHHHhC--CCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeE-EcCHHHHH--
Confidence 35677788775332 3445555 67899999999988765431 000 01123443 23332211
Q ss_pred hhccCCCeEeEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCC--e-EEEEEe
Q 014711 296 IVASYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHD--G-KVFLQS 348 (420)
Q Consensus 296 ~~~~~~~~~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~Lkpg--G-~l~~~t 348 (420)
...|.+++..|.|.-.+..+.-+.+ ....+.+.+.|+++ | .++++|
T Consensus 96 ------~~ad~~~I~VpTP~~~d~~~Dl~~v-~~a~~~I~~~l~~~~~g~lVV~eS 144 (444)
T 3vtf_A 96 ------AATDATFIAVGTPPAPDGSADLRYV-EAAARAVGRGIRAKGRWHLVVVKS 144 (444)
T ss_dssp ------HTSSEEEECCCCCBCTTSSBCCHHH-HHHHHHHHHHHHHHCSCCEEEECS
T ss_pred ------hcCCceEEEecCCCCCCCCCCcHHH-HHHHHHHHHHHhhcCCCeEEEEeC
Confidence 1247777777887543333321222 35667888888853 3 555554
No 454
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=53.25 E-value=41 Score=31.99 Aligned_cols=73 Identities=19% Similarity=0.158 Sum_probs=42.6
Q ss_pred CCEEEEEcCCc-cHH-HHHH------HHhCCCCeEEEE-eCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCC
Q 014711 231 QPLVVDIGSGN-GLF-LLGM------ARKRKDLNFLGL-EVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYP 301 (420)
Q Consensus 231 ~~~vLDIGcG~-G~~-~~~l------A~~~P~~~viGi-Dis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~ 301 (420)
.-+|-=||||. |.. +..+ ....|+.+++++ |.+++..+. .+++.+..+ ...|..+++ .+
T Consensus 25 kirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~---~a~~~g~~~---~y~d~~ell------~~ 92 (393)
T 4fb5_A 25 PLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEA---RAGEFGFEK---ATADWRALI------AD 92 (393)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHH---HHHHHTCSE---EESCHHHHH------HC
T ss_pred CccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHH---HHHHhCCCe---ecCCHHHHh------cC
Confidence 35688899985 221 1111 112467788876 888765544 344556543 357777764 25
Q ss_pred CeEeEEEEeCCCCC
Q 014711 302 GKLILVSIQCPNPD 315 (420)
Q Consensus 302 ~~~d~i~~~fpdp~ 315 (420)
..+|.|++.-|+.+
T Consensus 93 ~~iDaV~IatP~~~ 106 (393)
T 4fb5_A 93 PEVDVVSVTTPNQF 106 (393)
T ss_dssp TTCCEEEECSCGGG
T ss_pred CCCcEEEECCChHH
Confidence 67999999866654
No 455
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=52.91 E-value=39 Score=31.36 Aligned_cols=107 Identities=13% Similarity=0.097 Sum_probs=64.9
Q ss_pred CEEEEEcCCccHHHHHHHHh--CCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 232 PLVVDIGSGNGLFLLGMARK--RKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 232 ~~vLDIGcG~G~~~~~lA~~--~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
.+|.=||+|. .+..+|+. .-+.+|+++|.+++.++.+.+ .+ +++ ..|..+. . . .|.|++
T Consensus 16 ~~I~vIG~G~--mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~----~g---~~~-~~~~~~~----~---~--aDvvi~ 76 (296)
T 3qha_A 16 LKLGYIGLGN--MGAPMATRMTEWPGGVTVYDIRIEAMTPLAE----AG---ATL-ADSVADV----A---A--ADLIHI 76 (296)
T ss_dssp CCEEEECCST--THHHHHHHHTTSTTCEEEECSSTTTSHHHHH----TT---CEE-CSSHHHH----T---T--SSEEEE
T ss_pred CeEEEECcCH--HHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH----CC---CEE-cCCHHHH----H---h--CCEEEE
Confidence 3577788764 33333333 225689999999987765543 23 222 2344333 1 3 788988
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEe-CcHHHHHHHHHHHHHcCCc
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS-DIEEVMLRMKQQFLEYGKG 367 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~t-d~~~~~~~~~~~l~~~g~~ 367 (420)
..|+|. .-.+.++.+...|++|..++-.+ -.+...+.+.+.+.+.+..
T Consensus 77 ~vp~~~----------~~~~v~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~ 125 (296)
T 3qha_A 77 TVLDDA----------QVREVVGELAGHAKPGTVIAIHSTISDTTAVELARDLKARDIH 125 (296)
T ss_dssp CCSSHH----------HHHHHHHHHHTTCCTTCEEEECSCCCHHHHHHHHHHHGGGTCE
T ss_pred ECCChH----------HHHHHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCCE
Confidence 877652 11256688888899988776544 3344455666777776654
No 456
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=52.89 E-value=1.1e+02 Score=30.51 Aligned_cols=124 Identities=13% Similarity=0.056 Sum_probs=71.0
Q ss_pred CEEEEEcCCccHH--HHHHHHhCCCCeEEEEeCChHHHHHHHHHh------------HHhCCCcEEEEEcChhhhhhhhh
Q 014711 232 PLVVDIGSGNGLF--LLGMARKRKDLNFLGLEVNGKLVTHCRDSL------------QLSGITNGYFIATNATSTFRSIV 297 (420)
Q Consensus 232 ~~vLDIGcG~G~~--~~~lA~~~P~~~viGiDis~~~i~~A~~~~------------~~~~l~nv~~~~~Da~~~~~~~~ 297 (420)
..|.=||+|.=.. +..|++..++.+|+++|++++.++..++.. .+....++++ ..|..+.+
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~-t~~~~~~~---- 84 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFF-SSDIPKAI---- 84 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEE-ESCHHHHH----
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEE-ECCHHHHh----
Confidence 4688899986333 445666666789999999998877654310 0000012332 23322221
Q ss_pred ccCCCeEeEEEEeCCCCCCCCc-----chhhhhhHHHHHHHHHhhccCCeEEEEE-eCcHHHHHHHHHHHHH-cC
Q 014711 298 ASYPGKLILVSIQCPNPDFNRP-----EHRWRMVQRSLVEAVSDLLVHDGKVFLQ-SDIEEVMLRMKQQFLE-YG 365 (420)
Q Consensus 298 ~~~~~~~d~i~~~fpdp~~k~~-----~~k~Rl~~~~~l~~i~~~LkpgG~l~~~-td~~~~~~~~~~~l~~-~g 365 (420)
...|.|++..|.|..... ...-+.+ .+.++.+.+.|++|-.++.. |-.....+.+.+.+++ .+
T Consensus 85 ----~~aDvvii~Vptp~~~~g~~~~~~~dl~~v-~~~~~~i~~~l~~g~iVV~~STv~~gt~~~l~~~l~~~~~ 154 (481)
T 2o3j_A 85 ----AEADLIFISVNTPTKMYGRGKGMAPDLKYV-ESVSRTIAQYAGGPKIVVEKSTVPVKAAESIGCILREAQK 154 (481)
T ss_dssp ----HHCSEEEECCCCCBCCSSTTTTTSBCCHHH-HHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHTC
T ss_pred ----hcCCEEEEecCCccccccccccCCCcHHHH-HHHHHHHHHhCCCCCEEEECCCCCCCHHHHHHHHHHHhhC
Confidence 146888888788752110 0100111 36678888899998777654 3334445667777776 44
No 457
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=52.82 E-value=31 Score=34.24 Aligned_cols=95 Identities=15% Similarity=0.072 Sum_probs=60.6
Q ss_pred CCCEEEEEcC--CccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEc--Ch-----------h----
Q 014711 230 AQPLVVDIGS--GNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIAT--NA-----------T---- 290 (420)
Q Consensus 230 ~~~~vLDIGc--G~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~--Da-----------~---- 290 (420)
.+..||=+|+ |.|..++.+|+.. ..++++++.+++.++.+++ .|...+ +-.. |. .
T Consensus 228 ~g~~VlV~GasG~vG~~avqlak~~-Ga~vi~~~~~~~~~~~~~~----lGa~~v-i~~~~~d~~~~~~~~~~~~~~~~~ 301 (456)
T 3krt_A 228 QGDNVLIWGASGGLGSYATQFALAG-GANPICVVSSPQKAEICRA----MGAEAI-IDRNAEGYRFWKDENTQDPKEWKR 301 (456)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHH----HTCCEE-EETTTTTCCSEEETTEECHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHc-CCeEEEEECCHHHHHHHHh----hCCcEE-EecCcCcccccccccccchHHHHH
Confidence 4678998997 5688888888875 6789999999988877754 344321 1111 11 0
Q ss_pred --hhhhhhhccCCCeEeEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 291 --STFRSIVASYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 291 --~~~~~~~~~~~~~~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
+.+.+.. ....+|.++-.- ....+....+.|+++|++++.
T Consensus 302 ~~~~i~~~t--~g~g~Dvvid~~---------------G~~~~~~~~~~l~~~G~iv~~ 343 (456)
T 3krt_A 302 FGKRIRELT--GGEDIDIVFEHP---------------GRETFGASVFVTRKGGTITTC 343 (456)
T ss_dssp HHHHHHHHH--TSCCEEEEEECS---------------CHHHHHHHHHHEEEEEEEEES
T ss_pred HHHHHHHHh--CCCCCcEEEEcC---------------CchhHHHHHHHhhCCcEEEEE
Confidence 1111111 234688876531 125678888999999999873
No 458
>3mag_A VP39; methylated adenine, methyltransferase, RNA CAP analog, poly (A) polymerase, mRNA processing, transcription; HET: SAH 3MA; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1bky_A* 1jsz_A* 1v39_A* 1p39_A* 1vp9_A* 2vp3_A* 1eam_A* 1jte_A* 1jtf_A* 4dcg_A* 3mct_A* 1b42_A* 1eqa_A* 1av6_A* 3er9_A* 2gaf_A 3er8_A 2ga9_A* 3erc_A*
Probab=52.53 E-value=9.2 Score=36.21 Aligned_cols=51 Identities=16% Similarity=0.216 Sum_probs=40.3
Q ss_pred CCCEEEEEcCCccHHHHHHHHhCCC----CeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEc
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKRKD----LNFLGLEVNGKLVTHCRDSLQLSGITNGYFIAT 287 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~P~----~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~ 287 (420)
++..|+=+|||.|.++.-|++.+|+ .+++.+|-++.... ..+.+||.++..
T Consensus 60 ~~~~VVYVGSApG~HL~~L~~~fp~~f~~ikWvLiDPap~~~~-------l~~~~NV~li~~ 114 (307)
T 3mag_A 60 DGATVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLIDGRHHDPI-------LNGLRDVTLVTR 114 (307)
T ss_dssp TTCEEEEESCCSCHHHHHHHHHHHHTTCCCEEEEEESSCCCGG-------GTTCTTEEEEEC
T ss_pred CCcEEEEecccCccHHHHHHHhchhhCCCeEEEEEcCCcchhh-------hcCCCcEEEEec
Confidence 3579999999999999999998876 59999998765321 245678887765
No 459
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=51.84 E-value=1.1e+02 Score=27.25 Aligned_cols=117 Identities=13% Similarity=0.060 Sum_probs=65.7
Q ss_pred CCCEEEEEcCC-ccHHHHHHHHh--CCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhh--hhhhc---cCC
Q 014711 230 AQPLVVDIGSG-NGLFLLGMARK--RKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTF--RSIVA---SYP 301 (420)
Q Consensus 230 ~~~~vLDIGcG-~G~~~~~lA~~--~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~--~~~~~---~~~ 301 (420)
++.++|=.|++ +|.++..+|++ ..+.+|+.++.+....+.+++.....+ ++.++.+|+.+.. ...+. ..-
T Consensus 13 ~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~~ 90 (271)
T 3ek2_A 13 DGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG--SELVFPCDVADDAQIDALFASLKTHW 90 (271)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcC--CcEEEECCCCCHHHHHHHHHHHHHHc
Confidence 46788989974 35555555544 236799999998766555555444433 4788999987742 11121 012
Q ss_pred CeEeEEEEeCC--------CCCCC-C-cchhhhhhH------HHHHHHHHhhccCCeEEEEEe
Q 014711 302 GKLILVSIQCP--------NPDFN-R-PEHRWRMVQ------RSLVEAVSDLLVHDGKVFLQS 348 (420)
Q Consensus 302 ~~~d~i~~~fp--------dp~~k-~-~~~k~Rl~~------~~~l~~i~~~LkpgG~l~~~t 348 (420)
+.+|.++.+-- .+... . ...-.+.++ -.+++.+...|+++|.+++.+
T Consensus 91 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 153 (271)
T 3ek2_A 91 DSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLS 153 (271)
T ss_dssp SCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEe
Confidence 46888765421 11111 1 111112221 234566667777788877754
No 460
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=51.75 E-value=1.3e+02 Score=26.91 Aligned_cols=117 Identities=13% Similarity=0.094 Sum_probs=66.2
Q ss_pred CCCEEEEEcCCccHHHHHHHHh--CCCCeEEEEeCC------------hHHHHHHHHHhHHhCCCcEEEEEcChhhhh--
Q 014711 230 AQPLVVDIGSGNGLFLLGMARK--RKDLNFLGLEVN------------GKLVTHCRDSLQLSGITNGYFIATNATSTF-- 293 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~--~P~~~viGiDis------------~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~-- 293 (420)
.+.++|=.|++.| ++..+|++ .-+.+|+.+|.+ ...++.+...+...+ .++.++.+|+.+..
T Consensus 9 ~gk~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v 86 (287)
T 3pxx_A 9 QDKVVLVTGGARG-QGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG-RKAYTAEVDVRDRAAV 86 (287)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT-SCEEEEECCTTCHHHH
T ss_pred CCCEEEEeCCCCh-HHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcC-CceEEEEccCCCHHHH
Confidence 3577888887654 44444433 126899999987 666666666665544 47899999998642
Q ss_pred hhhhcc---CCCeEeEEEEeCC---CCCCCCcchhhhhhH------HHHHHHHHhhccCCeEEEEEe
Q 014711 294 RSIVAS---YPGKLILVSIQCP---NPDFNRPEHRWRMVQ------RSLVEAVSDLLVHDGKVFLQS 348 (420)
Q Consensus 294 ~~~~~~---~~~~~d~i~~~fp---dp~~k~~~~k~Rl~~------~~~l~~i~~~LkpgG~l~~~t 348 (420)
...+.. .-+.+|.++.+-- .........-.+.++ -.+++.+...|+.+|.+++.+
T Consensus 87 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 153 (287)
T 3pxx_A 87 SRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTG 153 (287)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred HHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEec
Confidence 111100 0136787765421 111011111112222 234566677778888887765
No 461
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=51.50 E-value=1.1e+02 Score=28.82 Aligned_cols=69 Identities=16% Similarity=0.121 Sum_probs=42.8
Q ss_pred CEEEEEcCCc-cHH-HHHHHHhCCCCeEEE-EeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 232 PLVVDIGSGN-GLF-LLGMARKRKDLNFLG-LEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 232 ~~vLDIGcG~-G~~-~~~lA~~~P~~~viG-iDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
.+|.=||||. |.. .....+..|+..+++ +|.+++..+ . ...++. ...|..+++ .+..+|.|+
T Consensus 8 ~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~~~~~~~------~--~~~~~~-~~~~~~~ll------~~~~vD~V~ 72 (352)
T 3kux_A 8 IKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSSDASKVH------A--DWPAIP-VVSDPQMLF------NDPSIDLIV 72 (352)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHH------T--TCSSCC-EESCHHHHH------HCSSCCEEE
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECCCHHHHH------h--hCCCCc-eECCHHHHh------cCCCCCEEE
Confidence 4678899997 432 444556678888875 587776433 1 122232 246666664 255799999
Q ss_pred EeCCCCC
Q 014711 309 IQCPNPD 315 (420)
Q Consensus 309 ~~fpdp~ 315 (420)
+.-|+.+
T Consensus 73 i~tp~~~ 79 (352)
T 3kux_A 73 IPTPNDT 79 (352)
T ss_dssp ECSCTTT
T ss_pred EeCChHH
Confidence 8766554
No 462
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=51.17 E-value=18 Score=34.81 Aligned_cols=70 Identities=14% Similarity=0.079 Sum_probs=42.1
Q ss_pred CEEEEEcCCc-cHH-HHHHHHhCCCCeEEEE-eCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 232 PLVVDIGSGN-GLF-LLGMARKRKDLNFLGL-EVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 232 ~~vLDIGcG~-G~~-~~~lA~~~P~~~viGi-Dis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
.+|.=||||. |.. .+...+..|+..++++ |.+++..+.+ +++.+ ... ...|..+++. +..+|.|+
T Consensus 6 ~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~---a~~~~--~~~-~~~~~~~ll~------~~~vD~V~ 73 (359)
T 3m2t_A 6 IKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERARRV---HRFIS--DIP-VLDNVPAMLN------QVPLDAVV 73 (359)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSSHHHHGGG---GGTSC--SCC-EESSHHHHHH------HSCCSEEE
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHH---HHhcC--CCc-ccCCHHHHhc------CCCCCEEE
Confidence 4677899998 653 3444455788888854 8888754433 22222 222 2366666642 34689998
Q ss_pred EeCCC
Q 014711 309 IQCPN 313 (420)
Q Consensus 309 ~~fpd 313 (420)
+.-|+
T Consensus 74 i~tp~ 78 (359)
T 3m2t_A 74 MAGPP 78 (359)
T ss_dssp ECSCH
T ss_pred EcCCc
Confidence 87443
No 463
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=51.05 E-value=60 Score=29.25 Aligned_cols=62 Identities=10% Similarity=0.071 Sum_probs=44.4
Q ss_pred CCCEEEEEcCCccHHHHHHHHh--CCCCeEEEEeCChHHHHHHHHHhHH-hCCCcEEEEEcChhhh
Q 014711 230 AQPLVVDIGSGNGLFLLGMARK--RKDLNFLGLEVNGKLVTHCRDSLQL-SGITNGYFIATNATST 292 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~--~P~~~viGiDis~~~i~~A~~~~~~-~~l~nv~~~~~Da~~~ 292 (420)
.+.++|=.|++.| ++..+|++ .-+.+|+.++.+++.++.+.+.+.. .+-.++.++.+|+.+.
T Consensus 7 ~~k~~lVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~ 71 (265)
T 3lf2_A 7 SEAVAVVTGGSSG-IGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDA 71 (265)
T ss_dssp TTCEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCH
T ss_pred CCCEEEEeCCCCh-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCH
Confidence 3677888897665 44444433 1267999999999988887777665 3444699999999864
No 464
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=50.91 E-value=91 Score=29.17 Aligned_cols=109 Identities=9% Similarity=-0.054 Sum_probs=59.0
Q ss_pred EEEEEcCCc-cHHHHHHHHhCCC--CeEEE-EeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 233 LVVDIGSGN-GLFLLGMARKRKD--LNFLG-LEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 233 ~vLDIGcG~-G~~~~~lA~~~P~--~~viG-iDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
++.=||||. |..-+...+..|+ ..+++ .|.+++.. ++.+.+.+... ...|..+++ .+..+|.|+
T Consensus 4 rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a---~~~a~~~~~~~---~~~~~~~ll------~~~~vD~V~ 71 (334)
T 3ohs_X 4 RWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRA---KEFAQKHDIPK---AYGSYEELA------KDPNVEVAY 71 (334)
T ss_dssp EEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHH---HHHHHHHTCSC---EESSHHHHH------HCTTCCEEE
T ss_pred EEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHH---HHHHHHcCCCc---ccCCHHHHh------cCCCCCEEE
Confidence 456688874 3322222334554 35666 48877654 34444556543 246666664 255799999
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE---eCcHHHHHHHHHHHHHcCCc
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ---SDIEEVMLRMKQQFLEYGKG 367 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~---td~~~~~~~~~~~l~~~g~~ 367 (420)
+.-|+.. | .+.+..+|+.|--++++ +-+....+++.+..++++..
T Consensus 72 i~tp~~~----H----------~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~ 119 (334)
T 3ohs_X 72 VGTQHPQ----H----------KAAVMLCLAAGKAVLCEKPMGVNAAEVREMVTEARSRGLF 119 (334)
T ss_dssp ECCCGGG----H----------HHHHHHHHHTTCEEEEESSSSSSHHHHHHHHHHHHHTTCC
T ss_pred ECCCcHH----H----------HHHHHHHHhcCCEEEEECCCCCCHHHHHHHHHHHHHhCCE
Confidence 9755543 1 12233455566555554 22344455566666666543
No 465
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=50.86 E-value=1.1e+02 Score=28.32 Aligned_cols=108 Identities=13% Similarity=0.011 Sum_probs=61.3
Q ss_pred CEEEEEcCCc-cHH-HHHHHHhCCCCeEE-EEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 232 PLVVDIGSGN-GLF-LLGMARKRKDLNFL-GLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 232 ~~vLDIGcG~-G~~-~~~lA~~~P~~~vi-GiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
.+|.=||||. |.. .+......|+..++ .+|.+++..+...+ +.+.+ ...|...+ ...+|.|+
T Consensus 6 ~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~---~~g~~----~~~~~~~l--------~~~~D~V~ 70 (319)
T 1tlt_A 6 LRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICE---SWRIP----YADSLSSL--------AASCDAVF 70 (319)
T ss_dssp EEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHH---HHTCC----BCSSHHHH--------HTTCSEEE
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHH---HcCCC----ccCcHHHh--------hcCCCEEE
Confidence 4577899985 332 33333446787777 67988876544333 34443 23343322 23589998
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEe---CcHHHHHHHHHHHHHcCCce
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS---DIEEVMLRMKQQFLEYGKGK 368 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~t---d~~~~~~~~~~~l~~~g~~~ 368 (420)
+.-|+.. -.+.+..+|+.|-.++++- -.....+++.+..++.+...
T Consensus 71 i~tp~~~--------------h~~~~~~al~~G~~v~~eKP~~~~~~~~~~l~~~a~~~g~~~ 119 (319)
T 1tlt_A 71 VHSSTAS--------------HFDVVSTLLNAGVHVCVDKPLAENLRDAERLVELAARKKLTL 119 (319)
T ss_dssp ECSCTTH--------------HHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCCE
T ss_pred EeCCchh--------------HHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeE
Confidence 8755442 2233445677776666652 23444566777777777543
No 466
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=50.79 E-value=17 Score=36.52 Aligned_cols=52 Identities=12% Similarity=0.138 Sum_probs=38.5
Q ss_pred EEEEEcCCccHHHHHHHHhC--CCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhh
Q 014711 233 LVVDIGSGNGLFLLGMARKR--KDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATST 292 (420)
Q Consensus 233 ~vLDIGcG~G~~~~~lA~~~--P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~ 292 (420)
.|+= ||.|..+..+|+.. -+..|+.||.+++.++.+.++. ++..+++|+.+.
T Consensus 5 ~iiI--~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~------~~~~i~Gd~~~~ 58 (461)
T 4g65_A 5 KIII--LGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY------DLRVVNGHASHP 58 (461)
T ss_dssp EEEE--ECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS------SCEEEESCTTCH
T ss_pred EEEE--ECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc------CcEEEEEcCCCH
Confidence 4444 45567888888873 3568999999999988776543 367889999874
No 467
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=50.41 E-value=38 Score=32.24 Aligned_cols=101 Identities=13% Similarity=0.135 Sum_probs=55.3
Q ss_pred CC-CEEEEEcC--CccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEE-----cChhhhhhhhhccCC
Q 014711 230 AQ-PLVVDIGS--GNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIA-----TNATSTFRSIVASYP 301 (420)
Q Consensus 230 ~~-~~vLDIGc--G~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~-----~Da~~~~~~~~~~~~ 301 (420)
.+ ..||=+|+ |.|..++.+|+.. ..+++++..+.+.+...++.+.+.|...+ +-. .|..+.+.+......
T Consensus 166 ~g~~~VlV~Ga~G~vG~~aiqlak~~-Ga~vi~~~~~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~~~i~~~t~~~~ 243 (364)
T 1gu7_A 166 PGKDWFIQNGGTSAVGKYASQIGKLL-NFNSISVIRDRPNLDEVVASLKELGATQV-ITEDQNNSREFGPTIKEWIKQSG 243 (364)
T ss_dssp TTTCEEEESCTTSHHHHHHHHHHHHH-TCEEEEEECCCTTHHHHHHHHHHHTCSEE-EEHHHHHCGGGHHHHHHHHHHHT
T ss_pred CCCcEEEECCCCcHHHHHHHHHHHHC-CCEEEEEecCccccHHHHHHHHhcCCeEE-EecCccchHHHHHHHHHHhhccC
Confidence 35 78888886 5677888899875 56888887655432222223334565432 111 121111111110002
Q ss_pred CeEeEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 302 GKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 302 ~~~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
..+|.++-.-.. +... ...++|+++|++.+.
T Consensus 244 ~g~Dvvid~~G~--------------~~~~-~~~~~l~~~G~~v~~ 274 (364)
T 1gu7_A 244 GEAKLALNCVGG--------------KSST-GIARKLNNNGLMLTY 274 (364)
T ss_dssp CCEEEEEESSCH--------------HHHH-HHHHTSCTTCEEEEC
T ss_pred CCceEEEECCCc--------------hhHH-HHHHHhccCCEEEEe
Confidence 358888654211 1333 667999999998764
No 468
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=50.25 E-value=25 Score=33.15 Aligned_cols=110 Identities=5% Similarity=-0.060 Sum_probs=58.9
Q ss_pred CEEEEEcCCc-cHHHHHHHHhCCCCeEEEE-eCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 232 PLVVDIGSGN-GLFLLGMARKRKDLNFLGL-EVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 232 ~~vLDIGcG~-G~~~~~lA~~~P~~~viGi-Dis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
.++.=||||. |...+...+..|+..++++ |.+++..+.. +.+.+... ...|..+++ .+..+|.|++
T Consensus 6 ~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~---a~~~~~~~---~~~~~~~ll------~~~~~D~V~i 73 (329)
T 3evn_A 6 VRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAF---ANKYHLPK---AYDKLEDML------ADESIDVIYV 73 (329)
T ss_dssp EEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC------CCCCSC---EESCHHHHH------TCTTCCEEEE
T ss_pred eEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHH---HHHcCCCc---ccCCHHHHh------cCCCCCEEEE
Confidence 4577799984 3322233334578877766 8877643322 22334322 345666553 3557899998
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE---eCcHHHHHHHHHHHHHcCCc
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ---SDIEEVMLRMKQQFLEYGKG 367 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~---td~~~~~~~~~~~l~~~g~~ 367 (420)
.-|+.. | .+.+..+|+.|--++++ +.+....+++.+..++.+..
T Consensus 74 ~tp~~~----h----------~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~~~~ 120 (329)
T 3evn_A 74 ATINQD----H----------YKVAKAALLAGKHVLVEKPFTLTYDQANELFALAESCNLF 120 (329)
T ss_dssp CSCGGG----H----------HHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHTTCC
T ss_pred CCCcHH----H----------HHHHHHHHHCCCeEEEccCCcCCHHHHHHHHHHHHHcCCE
Confidence 755543 1 12233455666555554 22334455566666666543
No 469
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=50.16 E-value=1.6e+02 Score=27.81 Aligned_cols=106 Identities=13% Similarity=0.052 Sum_probs=58.7
Q ss_pred CEEEEEcCCc-cH-HHHHHHHhCCCCeEEEE-eCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 232 PLVVDIGSGN-GL-FLLGMARKRKDLNFLGL-EVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 232 ~~vLDIGcG~-G~-~~~~lA~~~P~~~viGi-Dis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
.+|.=||||. |. +.....+..|+..++++ |.+++. +.+ +.+ ++. ...|..+++ .+..+|.|+
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~---~~~---~~~--~~~-~~~~~~~ll------~~~~vD~V~ 70 (358)
T 3gdo_A 6 IKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTSRTEE---VKR---DFP--DAE-VVHELEEIT------NDPAIELVI 70 (358)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECSCHHH---HHH---HCT--TSE-EESSTHHHH------TCTTCCEEE
T ss_pred ceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcCCHHH---HHh---hCC--CCc-eECCHHHHh------cCCCCCEEE
Confidence 4577799987 33 23455566788888766 777643 211 222 222 346776664 356799999
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE---eCcHHHHHHHHHHHHHcCC
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ---SDIEEVMLRMKQQFLEYGK 366 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~---td~~~~~~~~~~~l~~~g~ 366 (420)
+.-|+.. | .+.+..+|+.|=-++++ +-...-.+++.+..++.+.
T Consensus 71 i~tp~~~----H----------~~~~~~al~aGkhVl~EKPla~~~~e~~~l~~~a~~~g~ 117 (358)
T 3gdo_A 71 VTTPSGL----H----------YEHTMACIQAGKHVVMEKPMTATAEEGETLKRAADEKGV 117 (358)
T ss_dssp ECSCTTT----H----------HHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTC
T ss_pred EcCCcHH----H----------HHHHHHHHHcCCeEEEecCCcCCHHHHHHHHHHHHHcCC
Confidence 9866654 1 12233455555555553 2223334455555555553
No 470
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=50.05 E-value=60 Score=28.76 Aligned_cols=79 Identities=11% Similarity=0.138 Sum_probs=51.4
Q ss_pred CCCEEEEEcCCccHHHHHHHHh--CCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhh--hhhhc---cCCC
Q 014711 230 AQPLVVDIGSGNGLFLLGMARK--RKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTF--RSIVA---SYPG 302 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~--~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~--~~~~~---~~~~ 302 (420)
++.++|=.|++. .++..+|++ ..+.+|+.++.+++.++...+.+...+ .++.++.+|+.+.. ...+. ..-+
T Consensus 8 ~~k~vlITGas~-giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g 85 (253)
T 3qiv_A 8 ENKVGIVTGSGG-GIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADG-GTAISVAVDVSDPESAKAMADRTLAEFG 85 (253)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCC-hHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 357788889754 444444444 136799999999998888777765544 46889999998752 11111 0013
Q ss_pred eEeEEEEe
Q 014711 303 KLILVSIQ 310 (420)
Q Consensus 303 ~~d~i~~~ 310 (420)
.+|.++.+
T Consensus 86 ~id~li~~ 93 (253)
T 3qiv_A 86 GIDYLVNN 93 (253)
T ss_dssp CCCEEEEC
T ss_pred CCCEEEEC
Confidence 67887654
No 471
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=50.04 E-value=74 Score=31.10 Aligned_cols=79 Identities=13% Similarity=0.062 Sum_probs=43.9
Q ss_pred CEEEEEcCCccH----HHHHHHHhCCCCeEEE-E-eCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEe
Q 014711 232 PLVVDIGSGNGL----FLLGMARKRKDLNFLG-L-EVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLI 305 (420)
Q Consensus 232 ~~vLDIGcG~G~----~~~~lA~~~P~~~viG-i-Dis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d 305 (420)
.+|.=||||.|. .-....+..|+..+++ + |.+++..+.+ +++.+++.. -...|..+++.+--. .+..+|
T Consensus 38 ~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~---a~~~g~~~~-~~~~~~~~ll~~~~~-~~~~vD 112 (417)
T 3v5n_A 38 IRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSSTPEKAEAS---GRELGLDPS-RVYSDFKEMAIREAK-LKNGIE 112 (417)
T ss_dssp EEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCSSHHHHHHH---HHHHTCCGG-GBCSCHHHHHHHHHH-CTTCCS
T ss_pred ceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHH---HHHcCCCcc-cccCCHHHHHhcccc-cCCCCc
Confidence 478899999743 3333344567778874 4 9988765443 444555411 123566666421000 014689
Q ss_pred EEEEeCCCCC
Q 014711 306 LVSIQCPNPD 315 (420)
Q Consensus 306 ~i~~~fpdp~ 315 (420)
.|++.-|+..
T Consensus 113 ~V~I~tp~~~ 122 (417)
T 3v5n_A 113 AVAIVTPNHV 122 (417)
T ss_dssp EEEECSCTTS
T ss_pred EEEECCCcHH
Confidence 9998766554
No 472
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=49.71 E-value=75 Score=31.85 Aligned_cols=74 Identities=7% Similarity=-0.039 Sum_probs=44.1
Q ss_pred CCEEEEEcCCc--cHHHH---HHHHhC-CCCeEEE-EeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCe
Q 014711 231 QPLVVDIGSGN--GLFLL---GMARKR-KDLNFLG-LEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGK 303 (420)
Q Consensus 231 ~~~vLDIGcG~--G~~~~---~lA~~~-P~~~viG-iDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~ 303 (420)
..+|.=||||. |.... ...+.. |+..+++ +|.+++..+.+ +++.+.+.+. ...|..+++ .+..
T Consensus 39 ~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~~~~a~~~---a~~~g~~~~~-~~~d~~ell------~~~~ 108 (479)
T 2nvw_A 39 PIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQT---IEQLQLKHAT-GFDSLESFA------QYKD 108 (479)
T ss_dssp CEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHH---HHHTTCTTCE-EESCHHHHH------HCTT
T ss_pred cCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHH---HHHcCCCcce-eeCCHHHHh------cCCC
Confidence 35788999954 44332 222345 7888775 58887655443 3345554332 346666654 2456
Q ss_pred EeEEEEeCCCC
Q 014711 304 LILVSIQCPNP 314 (420)
Q Consensus 304 ~d~i~~~fpdp 314 (420)
+|.|++.-|+.
T Consensus 109 vD~V~I~tp~~ 119 (479)
T 2nvw_A 109 IDMIVVSVKVP 119 (479)
T ss_dssp CSEEEECSCHH
T ss_pred CCEEEEcCCcH
Confidence 89999875554
No 473
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=49.28 E-value=68 Score=32.21 Aligned_cols=121 Identities=15% Similarity=0.110 Sum_probs=68.0
Q ss_pred CCEEEEEcCCc-cHH-HHHHHHhCCCCeEEEEeCChHHHHHHHHHhHH---hC----------CCcEEEEEcChhhhhhh
Q 014711 231 QPLVVDIGSGN-GLF-LLGMARKRKDLNFLGLEVNGKLVTHCRDSLQL---SG----------ITNGYFIATNATSTFRS 295 (420)
Q Consensus 231 ~~~vLDIGcG~-G~~-~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~---~~----------l~nv~~~~~Da~~~~~~ 295 (420)
...|.=||+|. |.. +..||+. +.+|+++|++++.++..++.... .+ ..++++ ..|..+.+
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~--G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~-ttd~~~a~-- 82 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADI--GHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRF-STDIEAAV-- 82 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE-ECCHHHHH--
T ss_pred CceEEEECcCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEE-ECCHHHHh--
Confidence 35677788885 333 3445554 56899999999988776553100 01 113433 23332221
Q ss_pred hhccCCCeEeEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCc-HHHHHHHHHHHHH
Q 014711 296 IVASYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDI-EEVMLRMKQQFLE 363 (420)
Q Consensus 296 ~~~~~~~~~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~-~~~~~~~~~~l~~ 363 (420)
...|.|++..|.|.-.+..+.-..+ .+.++.+...|+||-.++..+-. ....+.+.+.+.+
T Consensus 83 ------~~aDvviiaVptp~~~~~~~dl~~v-~~v~~~i~~~l~~~~iVV~~STv~~gt~~~l~~~l~~ 144 (478)
T 2y0c_A 83 ------AHGDVQFIAVGTPPDEDGSADLQYV-LAAARNIGRYMTGFKVIVDKSTVPVGTAERVRAAVAE 144 (478)
T ss_dssp ------HHCSEEEECCCCCBCTTSSBCCHHH-HHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred ------hcCCEEEEEeCCCcccCCCccHHHH-HHHHHHHHHhcCCCCEEEEeCCcCCCchHHHHHHHHH
Confidence 1468888888887522222111111 46778888999998877665422 3344445555544
No 474
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=49.11 E-value=45 Score=30.10 Aligned_cols=62 Identities=16% Similarity=0.043 Sum_probs=44.7
Q ss_pred CCCEEEEEcCCccHHHHHHHHhC--CCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhh
Q 014711 230 AQPLVVDIGSGNGLFLLGMARKR--KDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATST 292 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~~--P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~ 292 (420)
.+.++|=.|.+ |.++..+|+++ -+.+|+.++.+++.++.+.+.+...+..++.++++|+.+.
T Consensus 9 ~~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~ 72 (262)
T 3pk0_A 9 QGRSVVVTGGT-KGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDR 72 (262)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCH
Confidence 35677777765 44555554441 3679999999999888877777665545799999999864
No 475
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=48.60 E-value=64 Score=29.82 Aligned_cols=79 Identities=14% Similarity=0.136 Sum_probs=52.1
Q ss_pred CCCEEEEEcCCccHHHHHHHHh--CCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhh--hhhhcc---CCC
Q 014711 230 AQPLVVDIGSGNGLFLLGMARK--RKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTF--RSIVAS---YPG 302 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~--~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~--~~~~~~---~~~ 302 (420)
++.++|=.|++.| ++..+|++ ..+.+|+.++.+++.++.+.+.+...+ .++.++.+|+.+.. ...+.. .-+
T Consensus 30 ~gk~vlVTGas~g-IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 107 (301)
T 3tjr_A 30 DGRAAVVTGGASG-IGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQG-FDAHGVVCDVRHLDEMVRLADEAFRLLG 107 (301)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CceEEEEccCCCHHHHHHHHHHHHHhCC
Confidence 3678888998755 44444443 136899999999999888877776554 46899999998752 111110 013
Q ss_pred eEeEEEEe
Q 014711 303 KLILVSIQ 310 (420)
Q Consensus 303 ~~d~i~~~ 310 (420)
.+|.++.+
T Consensus 108 ~id~lvnn 115 (301)
T 3tjr_A 108 GVDVVFSN 115 (301)
T ss_dssp SCSEEEEC
T ss_pred CCCEEEEC
Confidence 68887654
No 476
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=48.47 E-value=81 Score=29.35 Aligned_cols=108 Identities=14% Similarity=0.004 Sum_probs=56.1
Q ss_pred EEEEEcCCc-cHHH-HHHHHhCCCCeEEE-EeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 233 LVVDIGSGN-GLFL-LGMARKRKDLNFLG-LEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 233 ~vLDIGcG~-G~~~-~~lA~~~P~~~viG-iDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
+|.=||||. |... +..... |+..+++ +|.+++..+... .+.+... ...|..+++ .+..+|.|++
T Consensus 2 ~vgiiG~G~~g~~~~~~~l~~-~~~~~vav~d~~~~~~~~~~---~~~g~~~---~~~~~~~~l------~~~~~D~V~i 68 (332)
T 2glx_A 2 RWGLIGASTIAREWVIGAIRA-TGGEVVSMMSTSAERGAAYA---TENGIGK---SVTSVEELV------GDPDVDAVYV 68 (332)
T ss_dssp EEEEESCCHHHHHTHHHHHHH-TTCEEEEEECSCHHHHHHHH---HHTTCSC---CBSCHHHHH------TCTTCCEEEE
T ss_pred eEEEEcccHHHHHhhhHHhhc-CCCeEEEEECCCHHHHHHHH---HHcCCCc---ccCCHHHHh------cCCCCCEEEE
Confidence 356689975 4332 322233 7888875 599987654433 3344321 234554442 2446899988
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEe---CcHHHHHHHHHHHHHcCCc
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS---DIEEVMLRMKQQFLEYGKG 367 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~t---d~~~~~~~~~~~l~~~g~~ 367 (420)
.-|+.+ ....+..+|+.|-.++++. -.....+++.+..++.+..
T Consensus 69 ~tp~~~--------------h~~~~~~al~~Gk~v~~ekP~~~~~~~~~~l~~~a~~~g~~ 115 (332)
T 2glx_A 69 STTNEL--------------HREQTLAAIRAGKHVLCEKPLAMTLEDAREMVVAAREAGVV 115 (332)
T ss_dssp CSCGGG--------------HHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCC
T ss_pred eCChhH--------------hHHHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHcCCE
Confidence 755543 1122334555554454431 1233345566666655543
No 477
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=47.83 E-value=64 Score=28.85 Aligned_cols=79 Identities=11% Similarity=0.183 Sum_probs=51.5
Q ss_pred CCCEEEEEcCCccH---HHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHh--CCCcEEEEEcChhhhh--hhhhc---c
Q 014711 230 AQPLVVDIGSGNGL---FLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLS--GITNGYFIATNATSTF--RSIVA---S 299 (420)
Q Consensus 230 ~~~~vLDIGcG~G~---~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~--~l~nv~~~~~Da~~~~--~~~~~---~ 299 (420)
.+.++|=.|++.|- ++..|+++ +.+|+.++.+++.++.+.+.+... +..++.++.+|+.+.. ...+. .
T Consensus 6 ~~k~~lVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 83 (250)
T 3nyw_A 6 QKGLAIITGASQGIGAVIAAGLATD--GYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQ 83 (250)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHH--TCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHH
Confidence 35778888877552 23344544 679999999999888877776655 3357889999998742 11110 0
Q ss_pred CCCeEeEEEEe
Q 014711 300 YPGKLILVSIQ 310 (420)
Q Consensus 300 ~~~~~d~i~~~ 310 (420)
.-+.+|.++-+
T Consensus 84 ~~g~iD~lvnn 94 (250)
T 3nyw_A 84 KYGAVDILVNA 94 (250)
T ss_dssp HHCCEEEEEEC
T ss_pred hcCCCCEEEEC
Confidence 11468887654
No 478
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=47.46 E-value=28 Score=33.13 Aligned_cols=94 Identities=12% Similarity=0.022 Sum_probs=54.0
Q ss_pred CCCEEEEEcC--CccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEE
Q 014711 230 AQPLVVDIGS--GNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILV 307 (420)
Q Consensus 230 ~~~~vLDIGc--G~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i 307 (420)
.+..||=+|+ |.|..++.+|+......+++++ +++..+.++ .|...+--...|..+.+.+. ....+|.+
T Consensus 142 ~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-----~ga~~~~~~~~~~~~~~~~~---~~~g~Dvv 212 (349)
T 4a27_A 142 EGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-----DSVTHLFDRNADYVQEVKRI---SAEGVDIV 212 (349)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-----GGSSEEEETTSCHHHHHHHH---CTTCEEEE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-----cCCcEEEcCCccHHHHHHHh---cCCCceEE
Confidence 4678999998 4577888888876678999998 554444332 34432211112222222221 24578988
Q ss_pred EEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 308 SIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 308 ~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
+-....+ .+....++|+++|++++.
T Consensus 213 ~d~~g~~---------------~~~~~~~~l~~~G~~v~~ 237 (349)
T 4a27_A 213 LDCLCGD---------------NTGKGLSLLKPLGTYILY 237 (349)
T ss_dssp EEECC----------------------CTTEEEEEEEEEE
T ss_pred EECCCch---------------hHHHHHHHhhcCCEEEEE
Confidence 7553222 236677899999999874
No 479
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=47.45 E-value=49 Score=29.68 Aligned_cols=78 Identities=14% Similarity=0.148 Sum_probs=52.0
Q ss_pred CCCEEEEEcCCccHHHHHHHHh--CCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhh--hhhhc---cCCC
Q 014711 230 AQPLVVDIGSGNGLFLLGMARK--RKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTF--RSIVA---SYPG 302 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~--~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~--~~~~~---~~~~ 302 (420)
.+.++|=.|++.| ++..+|++ ..+.+|+.++.+++.++.+.+.+...+ .++.++.+|+.+.. ...+. .. +
T Consensus 6 ~~k~vlVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~-g 82 (252)
T 3h7a_A 6 RNATVAVIGAGDY-IGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAG-GRIVARSLDARNEDEVTAFLNAADAH-A 82 (252)
T ss_dssp CSCEEEEECCSSH-HHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT-CEEEEEECCTTCHHHHHHHHHHHHHH-S
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CeEEEEECcCCCHHHHHHHHHHHHhh-C
Confidence 3577888887765 44444443 126799999999998888877776654 47999999997642 11111 12 5
Q ss_pred eEeEEEEe
Q 014711 303 KLILVSIQ 310 (420)
Q Consensus 303 ~~d~i~~~ 310 (420)
.+|.++.+
T Consensus 83 ~id~lv~n 90 (252)
T 3h7a_A 83 PLEVTIFN 90 (252)
T ss_dssp CEEEEEEC
T ss_pred CceEEEEC
Confidence 78887654
No 480
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=47.16 E-value=55 Score=29.54 Aligned_cols=79 Identities=9% Similarity=-0.050 Sum_probs=52.9
Q ss_pred CCCEEEEEcCCc--c--H-HHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhh--hhhhc---c
Q 014711 230 AQPLVVDIGSGN--G--L-FLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTF--RSIVA---S 299 (420)
Q Consensus 230 ~~~~vLDIGcG~--G--~-~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~--~~~~~---~ 299 (420)
++.++|=-|.++ | . ++..||++ .++|+..+.+++.++.+.+.+++.+-.++.++++|+.+.. ...+. .
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~--Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQL--GAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGK 82 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 467888888644 3 2 23445555 7899999999999888888877766667899999987641 11111 0
Q ss_pred CCCeEeEEEEe
Q 014711 300 YPGKLILVSIQ 310 (420)
Q Consensus 300 ~~~~~d~i~~~ 310 (420)
.-+.+|.++-+
T Consensus 83 ~~G~iD~lvnn 93 (256)
T 4fs3_A 83 DVGNIDGVYHS 93 (256)
T ss_dssp HHCCCSEEEEC
T ss_pred HhCCCCEEEec
Confidence 12468877654
No 481
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=46.64 E-value=83 Score=28.26 Aligned_cols=78 Identities=15% Similarity=0.159 Sum_probs=51.5
Q ss_pred CCCEEEEEcCCccH---HHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhh--hhhhc---cCC
Q 014711 230 AQPLVVDIGSGNGL---FLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTF--RSIVA---SYP 301 (420)
Q Consensus 230 ~~~~vLDIGcG~G~---~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~--~~~~~---~~~ 301 (420)
++.++|=.|++.|- ++..|+++ ..+|+.++.+++.++.+.+.+...+ .++.++++|+.+.. ...+. ..-
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 86 (264)
T 3ucx_A 10 TDKVVVISGVGPALGTTLARRCAEQ--GADLVLAARTVERLEDVAKQVTDTG-RRALSVGTDITDDAQVAHLVDETMKAY 86 (264)
T ss_dssp TTCEEEEESCCTTHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHC--cCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 35788888886652 23334444 7899999999998888777776554 46899999998752 11111 012
Q ss_pred CeEeEEEEe
Q 014711 302 GKLILVSIQ 310 (420)
Q Consensus 302 ~~~d~i~~~ 310 (420)
+.+|.++.+
T Consensus 87 g~id~lv~n 95 (264)
T 3ucx_A 87 GRVDVVINN 95 (264)
T ss_dssp SCCSEEEEC
T ss_pred CCCcEEEEC
Confidence 468887654
No 482
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=45.93 E-value=49 Score=30.33 Aligned_cols=107 Identities=11% Similarity=0.021 Sum_probs=62.9
Q ss_pred EEEEEcCCccHHHHHHHHh--CCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEEe
Q 014711 233 LVVDIGSGNGLFLLGMARK--RKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQ 310 (420)
Q Consensus 233 ~vLDIGcG~G~~~~~lA~~--~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~~ 310 (420)
+|.=|||| ..+..+|+. .-+.+|+++|.+++.++.+.+. +. . ...|..+.. ...|.|++.
T Consensus 3 ~i~iIG~G--~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~----g~---~-~~~~~~~~~--------~~aDvvi~~ 64 (287)
T 3pef_A 3 KFGFIGLG--IMGSAMAKNLVKAGCSVTIWNRSPEKAEELAAL----GA---E-RAATPCEVV--------ESCPVTFAM 64 (287)
T ss_dssp EEEEECCS--HHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHT----TC---E-ECSSHHHHH--------HHCSEEEEC
T ss_pred EEEEEeec--HHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC----CC---e-ecCCHHHHH--------hcCCEEEEE
Confidence 45567775 444444433 2257899999999877665442 32 2 223443332 135888887
Q ss_pred CCCCCCCCcchhhhhhHHHHH---HHHHhhccCCeEEEEEeC-cHHHHHHHHHHHHHcCCc
Q 014711 311 CPNPDFNRPEHRWRMVQRSLV---EAVSDLLVHDGKVFLQSD-IEEVMLRMKQQFLEYGKG 367 (420)
Q Consensus 311 fpdp~~k~~~~k~Rl~~~~~l---~~i~~~LkpgG~l~~~td-~~~~~~~~~~~l~~~g~~ 367 (420)
.|+|. .-++.+ +.+...|++|..++-.+. .+...+.+.+.+.+.+..
T Consensus 65 vp~~~----------~~~~v~~~~~~l~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~ 115 (287)
T 3pef_A 65 LADPA----------AAEEVCFGKHGVLEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGGR 115 (287)
T ss_dssp CSSHH----------HHHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred cCCHH----------HHHHHHcCcchHhhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhCCE
Confidence 77652 112455 667788999887655432 344455667777777654
No 483
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=45.25 E-value=86 Score=31.34 Aligned_cols=133 Identities=8% Similarity=0.017 Sum_probs=68.5
Q ss_pred CCEEEEEcCCc-cHHHHHHHHhCCCCeEEEE-eCChHHHHHHHHHhHHhCC-Cc-----------------EEEEEcChh
Q 014711 231 QPLVVDIGSGN-GLFLLGMARKRKDLNFLGL-EVNGKLVTHCRDSLQLSGI-TN-----------------GYFIATNAT 290 (420)
Q Consensus 231 ~~~vLDIGcG~-G~~~~~lA~~~P~~~viGi-Dis~~~i~~A~~~~~~~~l-~n-----------------v~~~~~Da~ 290 (420)
..+|-=||||. |...+....+.|+.+++++ |.+++..+.+.++. .|. .+ ...+..|..
T Consensus 23 ~IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~~~era~~~a~~~--yG~~~~~~~~~~~~~i~~a~~~g~~~v~~D~e 100 (446)
T 3upl_A 23 PIRIGLIGAGEMGTDIVTQVARMQGIEVGALSARRLPNTFKAIRTA--YGDEENAREATTESAMTRAIEAGKIAVTDDND 100 (446)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSSSEEEEEEECSSTHHHHHHHHHH--HSSSTTEEECSSHHHHHHHHHTTCEEEESCHH
T ss_pred ceEEEEECChHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHh--cCCccccccccchhhhhhhhccCCceEECCHH
Confidence 45788899975 4444444445788776665 77777655543322 020 01 123456776
Q ss_pred hhhhhhhccCCCeEeEEEEeCCCCCCCCcchhh------hhh--HHH----HHHHHHhhccCCeEEEEEeCc--HHHHHH
Q 014711 291 STFRSIVASYPGKLILVSIQCPNPDFNRPEHRW------RMV--QRS----LVEAVSDLLVHDGKVFLQSDI--EEVMLR 356 (420)
Q Consensus 291 ~~~~~~~~~~~~~~d~i~~~fpdp~~k~~~~k~------Rl~--~~~----~l~~i~~~LkpgG~l~~~td~--~~~~~~ 356 (420)
+++ .+..+|.|++.-|+|++...+-.. .++ ++. ..+++.+.-+..|.++...+. +...-+
T Consensus 101 eLL------~d~dIDaVviaTp~p~~H~e~a~~AL~AGKHVv~~nk~l~~~eg~eL~~~A~e~Gvvl~~~~gdqp~~~~e 174 (446)
T 3upl_A 101 LIL------SNPLIDVIIDATGIPEVGAETGIAAIRNGKHLVMMNVEADVTIGPYLKAQADKQGVIYSLGAGDEPSSCME 174 (446)
T ss_dssp HHH------TCTTCCEEEECSCCHHHHHHHHHHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHTCCEEECTTSHHHHHHH
T ss_pred HHh------cCCCCCEEEEcCCChHHHHHHHHHHHHcCCcEEecCcccCHHHHHHHHHHHHHhCCeeeecCCcchHHHHH
Confidence 664 356799999876666411100000 011 111 123444444455655544443 333445
Q ss_pred HHHHHHHcCCceeEe
Q 014711 357 MKQQFLEYGKGKLVL 371 (420)
Q Consensus 357 ~~~~l~~~g~~~~~~ 371 (420)
+.+..+..|+..+.+
T Consensus 175 Lv~~a~~~G~~~v~~ 189 (446)
T 3upl_A 175 LIEFVSALGYEVVSA 189 (446)
T ss_dssp HHHHHHHTTCEEEEE
T ss_pred HHHHHHhCCCeEEEe
Confidence 566666677776544
No 484
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=45.04 E-value=74 Score=27.80 Aligned_cols=79 Identities=9% Similarity=-0.019 Sum_probs=49.2
Q ss_pred CCEEEEEcCCccHHHHHHHHhC--CCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhh--hhhhcc---CCCe
Q 014711 231 QPLVVDIGSGNGLFLLGMARKR--KDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTF--RSIVAS---YPGK 303 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~~--P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~--~~~~~~---~~~~ 303 (420)
+.++|=.|++ |.++.++++++ .+.+|+.++.+++.++.+.+.+.+..-.++.++.+|+.+.. ...+.. .-+.
T Consensus 2 ~k~vlITGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 80 (235)
T 3l77_A 2 MKVAVITGAS-RGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGD 80 (235)
T ss_dssp CCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSS
T ss_pred CCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence 3567777865 44555555542 36789999999988877766664332357999999998752 122210 0136
Q ss_pred EeEEEEe
Q 014711 304 LILVSIQ 310 (420)
Q Consensus 304 ~d~i~~~ 310 (420)
+|.++.+
T Consensus 81 id~li~~ 87 (235)
T 3l77_A 81 VDVVVAN 87 (235)
T ss_dssp CSEEEEC
T ss_pred CCEEEEC
Confidence 7887654
No 485
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=44.66 E-value=36 Score=32.15 Aligned_cols=60 Identities=10% Similarity=0.019 Sum_probs=39.3
Q ss_pred CeEeEEEEeCCCCCCCCcch-h-----hhhhHHHHHHHHHhhccCCeEEEEEeC-cH-HHHHHHHHHHHHc
Q 014711 302 GKLILVSIQCPNPDFNRPEH-R-----WRMVQRSLVEAVSDLLVHDGKVFLQSD-IE-EVMLRMKQQFLEY 364 (420)
Q Consensus 302 ~~~d~i~~~fpdp~~k~~~~-k-----~Rl~~~~~l~~i~~~LkpgG~l~~~td-~~-~~~~~~~~~l~~~ 364 (420)
+.+|.|+++...|. ..|+ . .|+++- .++.+.++|+|||.|++..= .. .-.+.++..+.+.
T Consensus 205 ~k~DvV~SDMApn~--sGh~yqQC~DHarii~L-al~fA~~vLkPGGtfV~KvyggaDr~se~lv~~LaR~ 272 (320)
T 2hwk_A 205 PKYDIIFVNVRTPY--KYHHYQQCEDHAIKLSM-LTKKACLHLNPGGTCVSIGYGYADRASESIIGAIARQ 272 (320)
T ss_dssp CCEEEEEEECCCCC--CSCHHHHHHHHHHHHHH-THHHHGGGEEEEEEEEEEECCCCSHHHHHHHHHHHTT
T ss_pred CcCCEEEEcCCCCC--CCccccccchHHHHHHH-HHHHHHHhcCCCceEEEEEecCCcccHHHHHHHHHHh
Confidence 56999999876664 3444 2 144443 77889999999999999862 22 1334555555553
No 486
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=44.10 E-value=69 Score=31.81 Aligned_cols=120 Identities=13% Similarity=0.190 Sum_probs=64.6
Q ss_pred CCEEEEEcCCccHH--HHHHHHhCCCCeEEEEeCChHHHHHHHHHhH------------Hh-CCCcEEEEEcChhhhhhh
Q 014711 231 QPLVVDIGSGNGLF--LLGMARKRKDLNFLGLEVNGKLVTHCRDSLQ------------LS-GITNGYFIATNATSTFRS 295 (420)
Q Consensus 231 ~~~vLDIGcG~G~~--~~~lA~~~P~~~viGiDis~~~i~~A~~~~~------------~~-~l~nv~~~~~Da~~~~~~ 295 (420)
+...-=||+|.=.. +..||+. +.+|+++|++++.++..++... +. ...++++- .|
T Consensus 11 ~~~~~ViGlGyvGlp~A~~La~~--G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~t-td------- 80 (431)
T 3ojo_A 11 GSKLTVVGLGYIGLPTSIMFAKH--GVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVS-TT------- 80 (431)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEE-SS-------
T ss_pred CCccEEEeeCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEe-Cc-------
Confidence 34444566664222 2334444 6789999999998877654200 00 01123322 11
Q ss_pred hhccCCCeEeEEEEeCCCCCCCC--cchhhhhhHHHHHHHHHhhccCCeEEEEEeC-cHHHHHHHHHHH-HHcCC
Q 014711 296 IVASYPGKLILVSIQCPNPDFNR--PEHRWRMVQRSLVEAVSDLLVHDGKVFLQSD-IEEVMLRMKQQF-LEYGK 366 (420)
Q Consensus 296 ~~~~~~~~~d~i~~~fpdp~~k~--~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td-~~~~~~~~~~~l-~~~g~ 366 (420)
....|.+++.-|+|...+ ..+.-+-+ ....+.+.+.|++|-.++..|- .+...+++.+.+ ++.|.
T Consensus 81 -----~~~aDvvii~VpTp~~~~~~~~~Dl~~V-~~~~~~i~~~l~~g~iVV~~STV~pgtt~~v~~~i~e~~g~ 149 (431)
T 3ojo_A 81 -----PEASDVFIIAVPTPNNDDQYRSCDISLV-MRALDSILPFLKKGNTIIVESTIAPKTMDDFVKPVIENLGF 149 (431)
T ss_dssp -----CCCCSEEEECCCCCBCSSSSCBBCCHHH-HHHHHHHGGGCCTTEEEEECSCCCTTHHHHTHHHHHHTTTC
T ss_pred -----hhhCCEEEEEeCCCccccccCCccHHHH-HHHHHHHHHhCCCCCEEEEecCCChhHHHHHHHHHHHHcCC
Confidence 123688888888886322 11111111 2456788889999987776642 344555665544 44553
No 487
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=43.93 E-value=22 Score=33.37 Aligned_cols=91 Identities=12% Similarity=0.111 Sum_probs=57.1
Q ss_pred EEEEEcC--CccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhc-cCCCeEeEEEE
Q 014711 233 LVVDIGS--GNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVA-SYPGKLILVSI 309 (420)
Q Consensus 233 ~vLDIGc--G~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~-~~~~~~d~i~~ 309 (420)
.||=+|+ |.|..++.+|+.. ..++++++.+++.++.+++ .|...+ + |..+.....+. .....+|.++-
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~-Ga~vi~~~~~~~~~~~~~~----lGa~~v-~---~~~~~~~~~~~~~~~~~~d~vid 223 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKR-GYDVVASTGNREAADYLKQ----LGASEV-I---SREDVYDGTLKALSKQQWQGAVD 223 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHH-TCCEEEEESSSSTHHHHHH----HTCSEE-E---EHHHHCSSCCCSSCCCCEEEEEE
T ss_pred eEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH----cCCcEE-E---ECCCchHHHHHHhhcCCccEEEE
Confidence 6899997 6678888888875 4689999999887777654 454322 1 11111000000 01345887754
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ 347 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~ 347 (420)
... ...+....+.|+++|++.+.
T Consensus 224 ~~g---------------~~~~~~~~~~l~~~G~iv~~ 246 (330)
T 1tt7_A 224 PVG---------------GKQLASLLSKIQYGGSVAVS 246 (330)
T ss_dssp SCC---------------THHHHHHHTTEEEEEEEEEC
T ss_pred CCc---------------HHHHHHHHHhhcCCCEEEEE
Confidence 311 14567788999999998864
No 488
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=43.85 E-value=79 Score=28.66 Aligned_cols=62 Identities=15% Similarity=0.102 Sum_probs=44.1
Q ss_pred CCCEEEEEcCCccHHHHHHHHh--CCCCeEEEEeCChHHHHHHHHHhHHhCCC--cEEEEEcChhhh
Q 014711 230 AQPLVVDIGSGNGLFLLGMARK--RKDLNFLGLEVNGKLVTHCRDSLQLSGIT--NGYFIATNATST 292 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~--~P~~~viGiDis~~~i~~A~~~~~~~~l~--nv~~~~~Da~~~ 292 (420)
.+.++|=.|.+. .++.++|++ ..+.+|+.+|.+++.++.+.+.+...+.. ++.++++|+.+.
T Consensus 10 ~~k~vlVTGas~-gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~ 75 (281)
T 3svt_A 10 QDRTYLVTGGGS-GIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNE 75 (281)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSH
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCH
Confidence 357788888654 444444443 13689999999999888877777655532 689999999764
No 489
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=43.54 E-value=1.2e+02 Score=28.43 Aligned_cols=105 Identities=19% Similarity=0.248 Sum_probs=59.1
Q ss_pred CEEEEEcCCc-c-HHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhh-hhhhhhccCCCeEeEEE
Q 014711 232 PLVVDIGSGN-G-LFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATS-TFRSIVASYPGKLILVS 308 (420)
Q Consensus 232 ~~vLDIGcG~-G-~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~-~~~~~~~~~~~~~d~i~ 308 (420)
..|.=||+|. | .++..|++.....+|+++|.+++.++.+++ .|... -...|..+ . + ...|.|+
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~----~G~~~--~~~~~~~~~~----~----~~aDvVi 99 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD----LGIID--EGTTSIAKVE----D----FSPDFVM 99 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH----TTSCS--EEESCTTGGG----G----GCCSEEE
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH----CCCcc--hhcCCHHHHh----h----ccCCEEE
Confidence 5688888764 2 223334444222389999999988776643 34321 12234333 2 1 2468887
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcH-HHHHHHHHHH
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIE-EVMLRMKQQF 361 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~-~~~~~~~~~l 361 (420)
+.-|... ..++++++...|+|+..+.-.+-.. ...+.+.+.+
T Consensus 100 lavp~~~-----------~~~vl~~l~~~l~~~~iv~d~~Svk~~~~~~~~~~l 142 (314)
T 3ggo_A 100 LSSPVRT-----------FREIAKKLSYILSEDATVTDQGSVKGKLVYDLENIL 142 (314)
T ss_dssp ECSCGGG-----------HHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHHHH
T ss_pred EeCCHHH-----------HHHHHHHHhhccCCCcEEEECCCCcHHHHHHHHHhc
Confidence 7654321 1367888999999988765433222 2234444444
No 490
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=43.37 E-value=2.1e+02 Score=28.27 Aligned_cols=96 Identities=14% Similarity=0.160 Sum_probs=57.8
Q ss_pred CEEEEEcCCc-cHH-HHHHHHhCCCCeEEEEeCChHHHHHHHHHhHH-------hC--------CCcEEEEEcChhhhhh
Q 014711 232 PLVVDIGSGN-GLF-LLGMARKRKDLNFLGLEVNGKLVTHCRDSLQL-------SG--------ITNGYFIATNATSTFR 294 (420)
Q Consensus 232 ~~vLDIGcG~-G~~-~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~-------~~--------l~nv~~~~~Da~~~~~ 294 (420)
..|.=||+|. |.. +..+++. +..|+++|++++.++.+++.... .+ ....++ ..|...+
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~--G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~~~~-- 112 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARV--GISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSSTKEL-- 112 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT--TCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCGGGG--
T ss_pred CEEEEECcCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCHHHH--
Confidence 4688899987 332 3334433 67899999999998887764321 11 011333 4444211
Q ss_pred hhhccCCCeEeEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEe
Q 014711 295 SIVASYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQS 348 (420)
Q Consensus 295 ~~~~~~~~~~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~t 348 (420)
...|.|+..-|+.. -+...+++++...++|+..+...|
T Consensus 113 -------~~aDlVIeaVpe~~---------~~k~~v~~~l~~~~~~~~ii~snT 150 (463)
T 1zcj_A 113 -------STVDLVVEAVFEDM---------NLKKKVFAELSALCKPGAFLCTNT 150 (463)
T ss_dssp -------TTCSEEEECCCSCH---------HHHHHHHHHHHHHSCTTCEEEECC
T ss_pred -------CCCCEEEEcCCCCH---------HHHHHHHHHHHhhCCCCeEEEeCC
Confidence 24688877654321 122467788888999988776544
No 491
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=43.20 E-value=79 Score=30.07 Aligned_cols=106 Identities=10% Similarity=0.034 Sum_probs=57.5
Q ss_pred CEEEEEcCCc-cHH-HHHHHHhCCCCeEEEE-eCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEE
Q 014711 232 PLVVDIGSGN-GLF-LLGMARKRKDLNFLGL-EVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVS 308 (420)
Q Consensus 232 ~~vLDIGcG~-G~~-~~~lA~~~P~~~viGi-Dis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~ 308 (420)
.+|.=||||. |.. .....+..|+..++++ |.+++.+ +.+ ..++. ...|..+++ .+..+|.|+
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~------~~~--~~~~~-~~~~~~~ll------~~~~vD~V~ 70 (362)
T 3fhl_A 6 IKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERSKELS------KER--YPQAS-IVRSFKELT------EDPEIDLIV 70 (362)
T ss_dssp EEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSSCCGG------GTT--CTTSE-EESCSHHHH------TCTTCCEEE
T ss_pred eEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHH------HHh--CCCCc-eECCHHHHh------cCCCCCEEE
Confidence 4577789987 332 3444556789888865 7776531 111 22333 346776664 355799999
Q ss_pred EeCCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEE---eCcHHHHHHHHHHHHHcCC
Q 014711 309 IQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQ---SDIEEVMLRMKQQFLEYGK 366 (420)
Q Consensus 309 ~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~---td~~~~~~~~~~~l~~~g~ 366 (420)
+.-|+.. | .+.+..+|+.|=-++++ +-...-.+++.+..++.+.
T Consensus 71 i~tp~~~----H----------~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~ 117 (362)
T 3fhl_A 71 VNTPDNT----H----------YEYAGMALEAGKNVVVEKPFTSTTKQGEELIALAKKKGL 117 (362)
T ss_dssp ECSCGGG----H----------HHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTC
T ss_pred EeCChHH----H----------HHHHHHHHHCCCeEEEecCCCCCHHHHHHHHHHHHHcCC
Confidence 9755543 1 12233455555555543 1223334445555555554
No 492
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=42.98 E-value=92 Score=28.02 Aligned_cols=78 Identities=10% Similarity=-0.004 Sum_probs=50.3
Q ss_pred CCEEEEEcCCccHHHHHHHHhC--CCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhh--hhhhc---cCCCe
Q 014711 231 QPLVVDIGSGNGLFLLGMARKR--KDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTF--RSIVA---SYPGK 303 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~~--P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~--~~~~~---~~~~~ 303 (420)
+.++|=.|++ |.++..+++.. -+.+|++++.++..++...+.+...+ .++.++.+|+.+.. ...+. ..-+.
T Consensus 31 ~k~vlITGas-ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 108 (272)
T 1yb1_A 31 GEIVLITGAG-HGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLG-AKVHTFVVDCSNREDIYSSAKKVKAEIGD 108 (272)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred CCEEEEECCC-chHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcC-CeEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence 5678888854 55666665542 36789999999988777666665544 36899999987641 11111 01135
Q ss_pred EeEEEEe
Q 014711 304 LILVSIQ 310 (420)
Q Consensus 304 ~d~i~~~ 310 (420)
+|.++.+
T Consensus 109 iD~li~~ 115 (272)
T 1yb1_A 109 VSILVNN 115 (272)
T ss_dssp CSEEEEC
T ss_pred CcEEEEC
Confidence 7887654
No 493
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=42.89 E-value=1.6e+02 Score=25.45 Aligned_cols=70 Identities=14% Similarity=0.145 Sum_probs=44.5
Q ss_pred CCCEEEEEcCCccHHHHHHHHh--CCCCeEEEEeCChHHHHHHHHHhHHhCCCcE-EEEEcChhhhhhhhhccCCCeEeE
Q 014711 230 AQPLVVDIGSGNGLFLLGMARK--RKDLNFLGLEVNGKLVTHCRDSLQLSGITNG-YFIATNATSTFRSIVASYPGKLIL 306 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~--~P~~~viGiDis~~~i~~A~~~~~~~~l~nv-~~~~~Da~~~~~~~~~~~~~~~d~ 306 (420)
.+.+||=.|+ +|.++..++++ ..+.+|++++.++..+..... .++ .++.+|+.+.+...+ ..+|.
T Consensus 20 ~~~~ilVtGa-tG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~-------~~~~~~~~~Dl~~~~~~~~----~~~D~ 87 (236)
T 3e8x_A 20 QGMRVLVVGA-NGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE-------RGASDIVVANLEEDFSHAF----ASIDA 87 (236)
T ss_dssp -CCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-------TTCSEEEECCTTSCCGGGG----TTCSE
T ss_pred CCCeEEEECC-CChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh-------CCCceEEEcccHHHHHHHH----cCCCE
Confidence 4678888885 46566555554 236799999999876543322 257 889999873223333 25788
Q ss_pred EEEeC
Q 014711 307 VSIQC 311 (420)
Q Consensus 307 i~~~f 311 (420)
|+.+-
T Consensus 88 vi~~a 92 (236)
T 3e8x_A 88 VVFAA 92 (236)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 86553
No 494
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=42.66 E-value=1.7e+02 Score=28.63 Aligned_cols=119 Identities=8% Similarity=0.041 Sum_probs=64.1
Q ss_pred EEEEcCCc-cHH-HHHHHHhCCCCeEEEEeCChHHHHHHHHHh------------HHh-CCCcEEEEEcChhhhhhhhhc
Q 014711 234 VVDIGSGN-GLF-LLGMARKRKDLNFLGLEVNGKLVTHCRDSL------------QLS-GITNGYFIATNATSTFRSIVA 298 (420)
Q Consensus 234 vLDIGcG~-G~~-~~~lA~~~P~~~viGiDis~~~i~~A~~~~------------~~~-~l~nv~~~~~Da~~~~~~~~~ 298 (420)
|.=||+|. |.. +..|++. +.+|+++|++++.++..++.. .+. ...++++ ..|..+.+
T Consensus 3 I~VIG~G~vG~~~A~~la~~--G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~-t~~~~~~~----- 74 (436)
T 1mv8_A 3 ISIFGLGYVGAVCAGCLSAR--GHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSG-TTDFKKAV----- 74 (436)
T ss_dssp EEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE-ESCHHHHH-----
T ss_pred EEEECCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEE-eCCHHHHh-----
Confidence 45578775 322 3334444 568999999998887654410 000 0113443 33433221
Q ss_pred cCCCeEeEEEEeCCCCCCCCcchhhhhhHHHHHHHHHhhccC---CeEEEEE-eCcHHH-HHHHHHHHHHc
Q 014711 299 SYPGKLILVSIQCPNPDFNRPEHRWRMVQRSLVEAVSDLLVH---DGKVFLQ-SDIEEV-MLRMKQQFLEY 364 (420)
Q Consensus 299 ~~~~~~d~i~~~fpdp~~k~~~~k~Rl~~~~~l~~i~~~Lkp---gG~l~~~-td~~~~-~~~~~~~l~~~ 364 (420)
...|.|++..|.|........-+.+ .+.++.+...|++ |..++.. |-.... .+.+.+.+++.
T Consensus 75 ---~~aDvviiaVptp~~~~~~~dl~~v-~~v~~~i~~~l~~~~~~~iVV~~Stv~~g~t~~~l~~~l~~~ 141 (436)
T 1mv8_A 75 ---LDSDVSFICVGTPSKKNGDLDLGYI-ETVCREIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIEDC 141 (436)
T ss_dssp ---HTCSEEEECCCCCBCTTSSBCCHHH-HHHHHHHHHHHTTCCSCCEEEECSCCCTTHHHHTHHHHHHHH
T ss_pred ---ccCCEEEEEcCCCcccCCCcchHHH-HHHHHHHHHHhcccCCCcEEEEeCCcCCCchHHHHHHHHHHh
Confidence 1368888887877633322211112 3677888888998 6666544 322333 44566666653
No 495
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=42.62 E-value=65 Score=28.37 Aligned_cols=59 Identities=15% Similarity=0.142 Sum_probs=43.1
Q ss_pred CCCEEEEEcCCccHHHHHHHHh--CCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcCh
Q 014711 230 AQPLVVDIGSGNGLFLLGMARK--RKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNA 289 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~--~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da 289 (420)
.+.++|=.|++ |.++..++++ ..+.+|+.++.++..++...+.+...+..++.++..|+
T Consensus 13 ~~k~vlITGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~ 73 (247)
T 3i1j_A 13 KGRVILVTGAA-RGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNL 73 (247)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCT
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEecc
Confidence 35778888875 4455555444 23679999999999998888877776656778888777
No 496
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=42.52 E-value=98 Score=27.30 Aligned_cols=60 Identities=12% Similarity=0.176 Sum_probs=42.2
Q ss_pred CCEEEEEcCCccHHHHHHHHhC--CCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhh
Q 014711 231 QPLVVDIGSGNGLFLLGMARKR--KDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATST 292 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~~--P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~ 292 (420)
+.++|=.|++ |.++..++++. .+.+|+.++.++..++...+.+...+ .++.++.+|+.+.
T Consensus 13 ~k~vlItGas-ggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~ 74 (260)
T 3awd_A 13 NRVAIVTGGA-QNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEG-HDVSSVVMDVTNT 74 (260)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCH
T ss_pred CCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CceEEEEecCCCH
Confidence 5678888864 55665555542 36799999999887766666555443 3689999998764
No 497
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=42.13 E-value=1.3e+02 Score=27.26 Aligned_cols=91 Identities=15% Similarity=0.220 Sum_probs=53.6
Q ss_pred CEEEEEcCCc-cH-HHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEE
Q 014711 232 PLVVDIGSGN-GL-FLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSI 309 (420)
Q Consensus 232 ~~vLDIGcG~-G~-~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~ 309 (420)
..|.=||||. |. ++..|++..+..+++++|.+++.++.+++ .+... ....|..+. -...|.|++
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~----~g~~~--~~~~~~~~~--------~~~aDvVil 72 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALE----RGIVD--EATADFKVF--------AALADVIIL 72 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHH----TTSCS--EEESCTTTT--------GGGCSEEEE
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHH----cCCcc--cccCCHHHh--------hcCCCEEEE
Confidence 4577788876 22 23344544446789999999987765533 34321 112233222 124688888
Q ss_pred eCCCCCCCCcchhhhhhHHHHHHHHHhh-ccCCeEEEEE
Q 014711 310 QCPNPDFNRPEHRWRMVQRSLVEAVSDL-LVHDGKVFLQ 347 (420)
Q Consensus 310 ~fpdp~~k~~~~k~Rl~~~~~l~~i~~~-LkpgG~l~~~ 347 (420)
..|.+. + .++++++... |+++..+...
T Consensus 73 avp~~~----------~-~~v~~~l~~~~l~~~~ivi~~ 100 (290)
T 3b1f_A 73 AVPIKK----------T-IDFIKILADLDLKEDVIITDA 100 (290)
T ss_dssp CSCHHH----------H-HHHHHHHHTSCCCTTCEEECC
T ss_pred cCCHHH----------H-HHHHHHHHhcCCCCCCEEEEC
Confidence 754431 1 4677888888 8888766543
No 498
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=41.90 E-value=80 Score=30.63 Aligned_cols=108 Identities=19% Similarity=0.194 Sum_probs=67.4
Q ss_pred CCEEEEEcCCccHHHHHHHHhCCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhhhhhhhccCCCeEeEEEEe
Q 014711 231 QPLVVDIGSGNGLFLLGMARKRKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATSTFRSIVASYPGKLILVSIQ 310 (420)
Q Consensus 231 ~~~vLDIGcG~G~~~~~lA~~~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~~~~~~~~~~~~~d~i~~~ 310 (420)
+..||.++-+-|.....++ |..+++.+.=|...... ++++|+.. .+ .+. . . ..+..+|.|.+.
T Consensus 46 ~~~~l~~n~~~g~~~~~~~---~~~~~~~~~~~~~~~~~----l~~~~~~~-~~--~~~--~-~----~~~~~~d~v~~~ 108 (381)
T 3dmg_A 46 GERALDLNPGVGWGSLPLE---GRMAVERLETSRAAFRC----LTASGLQA-RL--ALP--W-E----AAAGAYDLVVLA 108 (381)
T ss_dssp SSEEEESSCTTSTTTGGGB---TTBEEEEEECBHHHHHH----HHHTTCCC-EE--CCG--G-G----SCTTCEEEEEEE
T ss_pred CCcEEEecCCCCccccccC---CCCceEEEeCcHHHHHH----HHHcCCCc-cc--cCC--c-c----CCcCCCCEEEEE
Confidence 3579999999998777664 34567776545443322 55567653 21 111 1 1 136789999887
Q ss_pred CCCCCCCCcchhhhhhHHHHHHHHHhhccCCeEEEEEeCcHHHHHHHHHHHH
Q 014711 311 CPNPDFNRPEHRWRMVQRSLVEAVSDLLVHDGKVFLQSDIEEVMLRMKQQFL 362 (420)
Q Consensus 311 fpdp~~k~~~~k~Rl~~~~~l~~i~~~LkpgG~l~~~td~~~~~~~~~~~l~ 362 (420)
.| |.+. .++. ...|.++.+.|+|||.+++.-+...-.+.....+.
T Consensus 109 ~P----k~k~--~~~~-~~~l~~~~~~l~~g~~i~~~g~~~~g~~~~~~~~~ 153 (381)
T 3dmg_A 109 LP----AGRG--TAYV-QASLVAAARALRMGGRLYLAGDKNKGFERYFKEAR 153 (381)
T ss_dssp CC----GGGC--HHHH-HHHHHHHHHHEEEEEEEEEEEEGGGTHHHHHHHHH
T ss_pred CC----cchh--HHHH-HHHHHHHHHhCCCCCEEEEEEccHHHHHHHHHHHH
Confidence 43 2221 0112 36788899999999999988766666665666555
No 499
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=41.69 E-value=42 Score=31.13 Aligned_cols=62 Identities=16% Similarity=0.117 Sum_probs=44.3
Q ss_pred CCCEEEEEcCCccHHHHHHHHh--CCCCeEEEEeCChHHHHHHHHHhHHhCCCcEEEEEcChhhh
Q 014711 230 AQPLVVDIGSGNGLFLLGMARK--RKDLNFLGLEVNGKLVTHCRDSLQLSGITNGYFIATNATST 292 (420)
Q Consensus 230 ~~~~vLDIGcG~G~~~~~lA~~--~P~~~viGiDis~~~i~~A~~~~~~~~l~nv~~~~~Da~~~ 292 (420)
.+.++|=.|.+.| ++..+|++ .-+.+|+.++.+++.++.+.+.+...+..++.++.+|+.+.
T Consensus 40 ~~k~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~ 103 (293)
T 3rih_A 40 SARSVLVTGGTKG-IGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDP 103 (293)
T ss_dssp TTCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCH
Confidence 3577887786544 44444443 13679999999998887777776655545799999999874
No 500
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=41.49 E-value=37 Score=32.87 Aligned_cols=36 Identities=17% Similarity=0.171 Sum_probs=26.2
Q ss_pred HHHHHHHHhhccCCeEEEEEeCcHHHHHH-HHHHHHHc
Q 014711 328 RSLVEAVSDLLVHDGKVFLQSDIEEVMLR-MKQQFLEY 364 (420)
Q Consensus 328 ~~~l~~i~~~LkpgG~l~~~td~~~~~~~-~~~~l~~~ 364 (420)
.++|..+.++|+|||++.+-|-+ .+-+. +++.|++.
T Consensus 254 ~~~L~~a~~~L~~gGRl~VISFH-SLEDRiVK~~f~~~ 290 (347)
T 3tka_A 254 EQALKSSLNVLAPGGRLSIISFH-SLEDRIVKRFMREN 290 (347)
T ss_dssp HHHHHHHHHHEEEEEEEEEEESS-HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCCEEEEEecC-chhHHHHHHHHHHh
Confidence 67899999999999999998844 33333 44455543
Done!