Your job contains 1 sequence.
>014712
MAPEPEDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKE
SDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGD
KVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKM
REVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQ
KYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLD
GFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERD
IRFELLSRLCPNSTGKHSPFRSCFMVNPHDDYCKMLYVYRSYINNVTEVIFDVYVFMPYL
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 014712
(420 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2024822 - symbol:RPT1A "regulatory particle tr... 1883 2.1e-194 1
DICTYBASE|DDB_G0276917 - symbol:psmC2 "26S proteasome ATP... 1592 1.5e-163 1
UNIPROTKB|Q5E9F9 - symbol:PSMC2 "26S protease regulatory ... 1585 8.1e-163 1
UNIPROTKB|F1PPH7 - symbol:PSMC2 "Uncharacterized protein"... 1585 8.1e-163 1
UNIPROTKB|P35998 - symbol:PSMC2 "26S protease regulatory ... 1585 8.1e-163 1
UNIPROTKB|F1SB53 - symbol:PSMC2 "Uncharacterized protein"... 1585 8.1e-163 1
UNIPROTKB|Q4R4R0 - symbol:PSMC2 "26S protease regulatory ... 1585 8.1e-163 1
MGI|MGI:109555 - symbol:Psmc2 "proteasome (prosome, macro... 1583 1.3e-162 1
UNIPROTKB|P46472 - symbol:psmc2 "26S protease regulatory ... 1579 3.5e-162 1
ZFIN|ZDB-GENE-040426-1327 - symbol:psmc2 "proteasome (pro... 1579 3.5e-162 1
RGD|3428 - symbol:Psmc2 "proteasome (prosome, macropain) ... 1578 4.5e-162 1
UNIPROTKB|Q63347 - symbol:Psmc2 "26S protease regulatory ... 1578 4.5e-162 1
UNIPROTKB|Q5R8D7 - symbol:PSMC2 "26S protease regulatory ... 1573 1.5e-161 1
UNIPROTKB|F1NFL8 - symbol:PSMC2 "Uncharacterized protein"... 1570 3.1e-161 1
UNIPROTKB|E1C4V5 - symbol:PSMC2 "Uncharacterized protein"... 1561 2.8e-160 1
FB|FBgn0028687 - symbol:Rpt1 "Regulatory particle triple-... 1555 1.2e-159 1
GENEDB_PFALCIPARUM|PF13_0063 - symbol:PF13_0063 "26S prot... 1516 1.7e-155 1
UNIPROTKB|Q8IEK3 - symbol:PF13_0063 "26S proteasome regul... 1516 1.7e-155 1
UNIPROTKB|I3LJ30 - symbol:I3LJ30 "Uncharacterized protein... 1513 3.5e-155 1
WB|WBGene00004501 - symbol:rpt-1 species:6239 "Caenorhabd... 1512 4.4e-155 1
UNIPROTKB|Q18787 - symbol:rpt-1 "26S protease regulatory ... 1512 4.4e-155 1
CGD|CAL0005689 - symbol:RPT1 species:5476 "Candida albica... 1482 6.7e-152 1
SGD|S000001628 - symbol:RPT1 "ATPase of the 19S regulator... 1237 8.3e-151 2
ASPGD|ASPL0000034636 - symbol:AN2917 species:162425 "Emer... 1469 1.6e-150 1
POMBASE|SPBC16C6.07c - symbol:rpt1 "19S proteasome regula... 1461 1.1e-149 1
UNIPROTKB|B7Z5E2 - symbol:PSMC2 "cDNA FLJ52353, highly si... 1150 1.0e-116 1
FB|FBgn0020369 - symbol:Rpt6 "Regulatory particle triple-... 799 1.6e-79 1
UNIPROTKB|Q4RG45 - symbol:GSTENG00035021001 "Chromosome 2... 787 3.0e-78 1
UNIPROTKB|Q6P380 - symbol:psmc5 "Putative uncharacterized... 787 3.0e-78 1
WB|WBGene00018991 - symbol:F56F11.4 species:6239 "Caenorh... 786 3.8e-78 1
UNIPROTKB|Q6AZU7 - symbol:Q6AZU7 "Putative uncharacterize... 785 4.8e-78 1
UNIPROTKB|F1NU79 - symbol:PSMC5 "Uncharacterized protein"... 783 7.9e-78 1
UNIPROTKB|P62194 - symbol:PSMC5 "26S protease regulatory ... 783 7.9e-78 1
UNIPROTKB|P62195 - symbol:PSMC5 "26S protease regulatory ... 783 7.9e-78 1
UNIPROTKB|P62197 - symbol:PSMC5 "26S protease regulatory ... 783 7.9e-78 1
MGI|MGI:105047 - symbol:Psmc5 "protease (prosome, macropa... 783 7.9e-78 1
RGD|708376 - symbol:Psmc5 "proteasome (prosome, macropain... 783 7.9e-78 1
WB|WBGene00004506 - symbol:rpt-6 species:6239 "Caenorhabd... 783 7.9e-78 1
ZFIN|ZDB-GENE-030131-6547 - symbol:psmc5 "proteasome (pro... 783 7.9e-78 1
WB|WBGene00004504 - symbol:rpt-4 species:6239 "Caenorhabd... 780 1.6e-77 1
UNIPROTKB|O17071 - symbol:rpt-4 "Probable 26S protease re... 780 1.6e-77 1
POMBASE|SPBC23G7.12c - symbol:rpt6 "19S proteasome regula... 778 2.7e-77 1
UNIPROTKB|P46470 - symbol:psmc5 "26S protease regulatory ... 777 3.4e-77 1
TAIR|locus:2147670 - symbol:RPT6A "regulatory particle tr... 775 5.5e-77 1
TAIR|locus:2147685 - symbol:AT5G20000 species:3702 "Arabi... 771 1.5e-76 1
FB|FBgn0028685 - symbol:Rpt4 "Regulatory particle triple-... 748 3.6e-76 2
FB|FBgn0039788 - symbol:Rpt6R "Regulatory particle triple... 766 5.0e-76 1
SGD|S000003016 - symbol:RPT6 "ATPase of the 19S regulator... 763 1.0e-75 1
DICTYBASE|DDB_G0292382 - symbol:psmC5 "HIV TAT binding-pr... 758 3.5e-75 1
ASPGD|ASPL0000064945 - symbol:AN6988 species:162425 "Emer... 751 1.9e-74 1
UNIPROTKB|Q58576 - symbol:pan "Proteasome-activating nucl... 727 2.9e-74 2
GENEDB_PFALCIPARUM|PFL2345c - symbol:PFL2345c "tat-bindin... 742 1.7e-73 1
UNIPROTKB|Q8I4U5 - symbol:PFL2345c "Tat-binding protein h... 742 1.7e-73 1
CGD|CAL0006022 - symbol:RPT6 species:5476 "Candida albica... 740 2.8e-73 1
ZFIN|ZDB-GENE-030131-8730 - symbol:psmc1a "proteasome (pr... 711 3.7e-72 2
FB|FBgn0036224 - symbol:Rpt4R "Regulatory particle triple... 729 4.1e-72 1
ASPGD|ASPL0000032311 - symbol:AN5747 species:162425 "Emer... 727 6.7e-72 1
POMBASE|SPCC1682.16 - symbol:rpt4 "19S proteasome regulat... 726 8.6e-72 1
UNIPROTKB|Q9FXT8 - symbol:OsRPT4 "Os02g0199900 protein" s... 725 1.1e-71 1
UNIPROTKB|F1NCS8 - symbol:PSMC6 "Uncharacterized protein"... 724 1.4e-71 1
UNIPROTKB|Q5ZKX2 - symbol:PSMC6 "Uncharacterized protein"... 724 1.4e-71 1
ZFIN|ZDB-GENE-030131-304 - symbol:psmc6 "proteasome (pros... 724 1.4e-71 1
FB|FBgn0015282 - symbol:Rpt2 "Regulatory particle triple-... 723 1.8e-71 1
TAIR|locus:2028200 - symbol:AT1G45000 species:3702 "Arabi... 723 1.8e-71 1
TAIR|locus:2159996 - symbol:RPT4A "regulatory particle tr... 723 1.8e-71 1
TAIR|locus:2079742 - symbol:RPT5A "regulatory particle tr... 722 2.3e-71 1
CGD|CAL0005827 - symbol:RPT4 species:5476 "Candida albica... 721 2.9e-71 1
UNIPROTKB|F1NSP7 - symbol:PSMC1 "26S protease regulatory ... 720 3.7e-71 1
UNIPROTKB|F1NTZ4 - symbol:PSMC1 "26S protease regulatory ... 720 3.7e-71 1
DICTYBASE|DDB_G0270784 - symbol:psmC1 "TAT binding protei... 719 4.8e-71 1
UNIPROTKB|A4FUZ3 - symbol:PSMC1 "Proteasome (Prosome, mac... 719 4.8e-71 1
UNIPROTKB|F1MLV1 - symbol:PSMC6 "26S protease regulatory ... 719 4.8e-71 1
UNIPROTKB|Q2KIW6 - symbol:PSMC6 "26S protease regulatory ... 719 4.8e-71 1
UNIPROTKB|F1PQ40 - symbol:PSMC1 "Uncharacterized protein"... 719 4.8e-71 1
UNIPROTKB|J9P1N0 - symbol:PSMC6 "Uncharacterized protein"... 719 4.8e-71 1
UNIPROTKB|B4DR63 - symbol:PSMC1 "cDNA FLJ58247, highly si... 719 4.8e-71 1
UNIPROTKB|P62191 - symbol:PSMC1 "26S protease regulatory ... 719 4.8e-71 1
UNIPROTKB|P62333 - symbol:PSMC6 "26S protease regulatory ... 719 4.8e-71 1
UNIPROTKB|F1SFE6 - symbol:PSMC6 "Uncharacterized protein"... 719 4.8e-71 1
UNIPROTKB|F2Z5J1 - symbol:PSMC1 "Uncharacterized protein"... 719 4.8e-71 1
UNIPROTKB|P62335 - symbol:PSMC6 "26S protease regulatory ... 719 4.8e-71 1
MGI|MGI:106054 - symbol:Psmc1 "protease (prosome, macropa... 719 4.8e-71 1
MGI|MGI:1914339 - symbol:Psmc6 "proteasome (prosome, macr... 719 4.8e-71 1
RGD|2318218 - symbol:LOC100365869 "proteasome (prosome, m... 719 4.8e-71 1
RGD|621097 - symbol:Psmc1 "proteasome (prosome, macropain... 719 4.8e-71 1
UNIPROTKB|Q90732 - symbol:PSMC1 "26S protease regulatory ... 716 9.9e-71 1
RGD|1308825 - symbol:Psmc6 "proteasome (prosome, macropai... 716 9.9e-71 1
WB|WBGene00004502 - symbol:rpt-2 species:6239 "Caenorhabd... 716 9.9e-71 1
TAIR|locus:2161258 - symbol:RPT3 "regulatory particle tri... 715 1.3e-70 1
TAIR|locus:2036099 - symbol:RPT5B "26S proteasome AAA-ATP... 714 1.6e-70 1
ZFIN|ZDB-GENE-040625-69 - symbol:psmc1b "proteasome (pros... 713 2.1e-70 1
TAIR|locus:2061639 - symbol:RPT2b "regulatory particle AA... 712 2.6e-70 1
GENEDB_PFALCIPARUM|PF13_0033 - symbol:PF13_0033 "26S prot... 711 3.3e-70 1
UNIPROTKB|Q8IEQ1 - symbol:PF13_0033 "26S proteasome regul... 711 3.3e-70 1
TAIR|locus:2119926 - symbol:RPT2a "regulatory particle AA... 711 3.3e-70 1
GENEDB_PFALCIPARUM|PF11_0314 - symbol:PF11_0314 "26S prot... 709 5.5e-70 1
UNIPROTKB|Q8II60 - symbol:PF11_0314 "26S protease subunit... 709 5.5e-70 1
SGD|S000005785 - symbol:RPT4 "ATPase of the 19S regulator... 704 1.8e-69 1
DICTYBASE|DDB_G0284415 - symbol:psmC3 "26S proteasome ATP... 703 2.4e-69 1
WB|WBGene00004505 - symbol:rpt-5 species:6239 "Caenorhabd... 700 4.9e-69 1
WARNING: Descriptions of 626 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2024822 [details] [associations]
symbol:RPT1A "regulatory particle triple-A 1A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC009324 EMBL:AC024260
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123390 EMBL:AY062860 EMBL:BT000069 IPI:IPI00548766
PIR:G96577 RefSeq:NP_175778.1 UniGene:At.66918
ProteinModelPortal:Q9SSB5 SMR:Q9SSB5 IntAct:Q9SSB5 STRING:Q9SSB5
PaxDb:Q9SSB5 PRIDE:Q9SSB5 EnsemblPlants:AT1G53750.1 GeneID:841812
KEGG:ath:AT1G53750 GeneFarm:2748 TAIR:At1g53750 InParanoid:Q9SSB5
KO:K03061 OMA:DIRWELI PhylomeDB:Q9SSB5 ProtClustDB:CLSN2682130
Genevestigator:Q9SSB5 GermOnline:AT1G53750 Uniprot:Q9SSB5
Length = 426
Score = 1883 (667.9 bits), Expect = 2.1e-194, P = 2.1e-194
Identities = 360/375 (96%), Positives = 368/375 (98%)
Query: 1 MAPEPEDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKE 60
M + EDEI+DEKNPRPLDEDDIALLKTYGLGPYS IKK EKEIKD+AKK+NDLCGIKE
Sbjct: 1 MVRDIEDEIRDEKNPRPLDEDDIALLKTYGLGPYSAPIKKVEKEIKDLAKKINDLCGIKE 60
Query: 61 SDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGD 120
SDTGLA PSQWDLVSDKQMMQEEQPLQVARCTKII+PN+ED+KYVINVKQIAKFVVGLGD
Sbjct: 61 SDTGLAPPSQWDLVSDKQMMQEEQPLQVARCTKIISPNTEDAKYVINVKQIAKFVVGLGD 120
Query: 121 KVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKM 180
KVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKM
Sbjct: 121 KVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKM 180
Query: 181 REVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQ 240
REVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQ
Sbjct: 181 REVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQ 240
Query: 241 KYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLD 300
KYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLD
Sbjct: 241 KYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLD 300
Query: 301 GFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERD 360
GFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERD
Sbjct: 301 GFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERD 360
Query: 361 IRFELLSRLCPNSTG 375
IRFELL+RLCPNSTG
Sbjct: 361 IRFELLARLCPNSTG 375
>DICTYBASE|DDB_G0276917 [details] [associations]
symbol:psmC2 "26S proteasome ATPase 2 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0000502
"proteasome complex" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0276917 GO:GO:0005524 GO:GO:0005634 GO:GO:0045335
GenomeReviews:CM000151_GR GO:GO:0016887 GO:GO:0000502 GO:GO:0006511
HSSP:Q9WZ49 EMBL:AAFI02000019 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03061 RefSeq:XP_642830.1 ProteinModelPortal:Q86JA1
STRING:Q86JA1 PRIDE:Q86JA1 EnsemblProtists:DDB0232966
GeneID:8620693 KEGG:ddi:DDB_G0276917 OMA:HIFTIHA
ProtClustDB:CLSZ2429177 Uniprot:Q86JA1
Length = 428
Score = 1592 (565.5 bits), Expect = 1.5e-163, P = 1.5e-163
Identities = 301/370 (81%), Positives = 329/370 (88%)
Query: 6 EDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGL 65
EDE+ +E P LDE DIALLK+YG+GPYS SI+ E++IK M KVN+LCGIKESDTG+
Sbjct: 8 EDELLNETAPVALDEGDIALLKSYGVGPYSKSIRILEEDIKKMTSKVNELCGIKESDTGI 67
Query: 66 AAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPT 125
PSQWDLV DK EE PLQVARCTKII+ ++KY+I VKQIAKFVV LGDK+SPT
Sbjct: 68 GPPSQWDLVVDKTSAHEEPPLQVARCTKIIDVGKPNAKYIITVKQIAKFVVALGDKLSPT 127
Query: 126 DIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVE 185
D+EEG+RVGVDRNKYQIQIPLPPKID SVTMM VEEKPD+TY DVGGCKEQIEK+REVVE
Sbjct: 128 DVEEGIRVGVDRNKYQIQIPLPPKIDASVTMMQVEEKPDITYKDVGGCKEQIEKLREVVE 187
Query: 186 LPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGE 245
+P+LHPEKFV LGIDPPKGVL YGPPGTGKTL ARAVANRTDA F+RVIGSELVQKYVGE
Sbjct: 188 MPLLHPEKFVNLGIDPPKGVLMYGPPGTGKTLCARAVANRTDAAFVRVIGSELVQKYVGE 247
Query: 246 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDAR 305
GARMVR+LFQMARSKKACI+FFDEVDAIGGARFDDG GGDNEVQRTMLE++NQLDGFD R
Sbjct: 248 GARMVRDLFQMARSKKACIIFFDEVDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPR 307
Query: 306 GNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFEL 365
GNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLE R IF IH +TM+C RDIRFEL
Sbjct: 308 GNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRAHIFTIHAKTMSCARDIRFEL 367
Query: 366 LSRLCPNSTG 375
L+RLCPNSTG
Sbjct: 368 LARLCPNSTG 377
>UNIPROTKB|Q5E9F9 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9913 "Bos taurus" [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 HSSP:Q9WZ49 GO:GO:0000932 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 KO:K03061 OMA:DIRWELI
EMBL:BT020961 EMBL:BC102391 IPI:IPI00693210 RefSeq:NP_001015639.1
UniGene:Bt.24017 ProteinModelPortal:Q5E9F9 SMR:Q5E9F9 PRIDE:Q5E9F9
Ensembl:ENSBTAT00000065774 GeneID:530186 KEGG:bta:530186 CTD:5701
GeneTree:ENSGT00550000074978 OrthoDB:EOG4RXZ05 NextBio:20875201
Uniprot:Q5E9F9
Length = 433
Score = 1585 (563.0 bits), Expect = 8.1e-163, P = 8.1e-163
Identities = 299/370 (80%), Positives = 332/370 (89%)
Query: 6 EDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGL 65
EDE KD+K R LDE DIALLKTYG YS IK+ E +I+ + KK+N+L GIKESDTGL
Sbjct: 14 EDE-KDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGL 72
Query: 66 AAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPT 125
A P+ WDL +DKQ +Q EQPLQVARCTKIIN +SED KY+INVKQ AKFVV L D+V+PT
Sbjct: 73 APPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPT 132
Query: 126 DIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVE 185
DIEEGMRVGVDRNKYQI IPLPPKIDP+VTMM VEEKPDVTY+DVGGCKEQIEK+REVVE
Sbjct: 133 DIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVE 192
Query: 186 LPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGE 245
P+LHPE+FV LGI+PPKGVL +GPPGTGKTL ARAVANRTDACFIRVIGSELVQKYVGE
Sbjct: 193 TPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGE 252
Query: 246 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDAR 305
GARMVRELF+MAR+KKAC++FFDE+DAIGGARFDDG GGDNEVQRTMLE++NQLDGFD R
Sbjct: 253 GARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPR 312
Query: 306 GNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFEL 365
GNIKVLMATNRPDTLDPAL+RPGRLDRK+EF LPDLE RT IFKIH R+M+ ERDIRFEL
Sbjct: 313 GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFEL 372
Query: 366 LSRLCPNSTG 375
L+RLCPNSTG
Sbjct: 373 LARLCPNSTG 382
>UNIPROTKB|F1PPH7 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 KO:K03061
OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978 EMBL:AAEX03011248
RefSeq:XP_533103.3 ProteinModelPortal:F1PPH7
Ensembl:ENSCAFT00000006754 GeneID:475896 KEGG:cfa:475896
Uniprot:F1PPH7
Length = 433
Score = 1585 (563.0 bits), Expect = 8.1e-163, P = 8.1e-163
Identities = 299/370 (80%), Positives = 332/370 (89%)
Query: 6 EDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGL 65
EDE KD+K R LDE DIALLKTYG YS IK+ E +I+ + KK+N+L GIKESDTGL
Sbjct: 14 EDE-KDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGL 72
Query: 66 AAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPT 125
A P+ WDL +DKQ +Q EQPLQVARCTKIIN +SED KY+INVKQ AKFVV L D+V+PT
Sbjct: 73 APPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPT 132
Query: 126 DIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVE 185
DIEEGMRVGVDRNKYQI IPLPPKIDP+VTMM VEEKPDVTY+DVGGCKEQIEK+REVVE
Sbjct: 133 DIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVE 192
Query: 186 LPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGE 245
P+LHPE+FV LGI+PPKGVL +GPPGTGKTL ARAVANRTDACFIRVIGSELVQKYVGE
Sbjct: 193 TPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGE 252
Query: 246 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDAR 305
GARMVRELF+MAR+KKAC++FFDE+DAIGGARFDDG GGDNEVQRTMLE++NQLDGFD R
Sbjct: 253 GARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPR 312
Query: 306 GNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFEL 365
GNIKVLMATNRPDTLDPAL+RPGRLDRK+EF LPDLE RT IFKIH R+M+ ERDIRFEL
Sbjct: 313 GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFEL 372
Query: 366 LSRLCPNSTG 375
L+RLCPNSTG
Sbjct: 373 LARLCPNSTG 382
>UNIPROTKB|P35998 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0019048
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0016887
GO:GO:0051436 GO:GO:0000932 EMBL:CH471070 GO:GO:0000216
GO:GO:0000209 GO:GO:0000084 GO:GO:0031145 GO:GO:0051437
EMBL:CH236947 GO:GO:0006521 Reactome:REACT_383 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI CTD:5701 EMBL:D11094
EMBL:AB075520 EMBL:BC002589 IPI:IPI00021435 PIR:S24353
RefSeq:NP_001191382.1 RefSeq:NP_002794.1 UniGene:Hs.437366
ProteinModelPortal:P35998 SMR:P35998 DIP:DIP-27554N IntAct:P35998
MINT:MINT-1163662 STRING:P35998 PhosphoSite:P35998 DMDM:547930
OGP:P35998 REPRODUCTION-2DPAGE:IPI00021435
REPRODUCTION-2DPAGE:P35998 PaxDb:P35998 PeptideAtlas:P35998
PRIDE:P35998 DNASU:5701 Ensembl:ENST00000292644
Ensembl:ENST00000435765 GeneID:5701 KEGG:hsa:5701 UCSC:uc003vbs.3
GeneCards:GC07P102984 HGNC:HGNC:9548 HPA:HPA019238 MIM:154365
neXtProt:NX_P35998 PharmGKB:PA33893 InParanoid:P35998
PhylomeDB:P35998 ChiTaRS:PSMC2 GenomeRNAi:5701 NextBio:22150
ArrayExpress:P35998 Bgee:P35998 CleanEx:HS_PSMC2
Genevestigator:P35998 GermOnline:ENSG00000161057 Uniprot:P35998
Length = 433
Score = 1585 (563.0 bits), Expect = 8.1e-163, P = 8.1e-163
Identities = 299/370 (80%), Positives = 332/370 (89%)
Query: 6 EDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGL 65
EDE KD+K R LDE DIALLKTYG YS IK+ E +I+ + KK+N+L GIKESDTGL
Sbjct: 14 EDE-KDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGL 72
Query: 66 AAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPT 125
A P+ WDL +DKQ +Q EQPLQVARCTKIIN +SED KY+INVKQ AKFVV L D+V+PT
Sbjct: 73 APPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPT 132
Query: 126 DIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVE 185
DIEEGMRVGVDRNKYQI IPLPPKIDP+VTMM VEEKPDVTY+DVGGCKEQIEK+REVVE
Sbjct: 133 DIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVE 192
Query: 186 LPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGE 245
P+LHPE+FV LGI+PPKGVL +GPPGTGKTL ARAVANRTDACFIRVIGSELVQKYVGE
Sbjct: 193 TPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGE 252
Query: 246 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDAR 305
GARMVRELF+MAR+KKAC++FFDE+DAIGGARFDDG GGDNEVQRTMLE++NQLDGFD R
Sbjct: 253 GARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPR 312
Query: 306 GNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFEL 365
GNIKVLMATNRPDTLDPAL+RPGRLDRK+EF LPDLE RT IFKIH R+M+ ERDIRFEL
Sbjct: 313 GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFEL 372
Query: 366 LSRLCPNSTG 375
L+RLCPNSTG
Sbjct: 373 LARLCPNSTG 382
>UNIPROTKB|F1SB53 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
OMA:HIFTIHA EMBL:CU570825 Ensembl:ENSSSCT00000016802 Uniprot:F1SB53
Length = 475
Score = 1585 (563.0 bits), Expect = 8.1e-163, P = 8.1e-163
Identities = 299/370 (80%), Positives = 332/370 (89%)
Query: 6 EDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGL 65
EDE KD+K R LDE DIALLKTYG YS IK+ E +I+ + KK+N+L GIKESDTGL
Sbjct: 56 EDE-KDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGL 114
Query: 66 AAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPT 125
A P+ WDL +DKQ +Q EQPLQVARCTKIIN +SED KY+INVKQ AKFVV L D+V+PT
Sbjct: 115 APPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPT 174
Query: 126 DIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVE 185
DIEEGMRVGVDRNKYQI IPLPPKIDP+VTMM VEEKPDVTY+DVGGCKEQIEK+REVVE
Sbjct: 175 DIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVE 234
Query: 186 LPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGE 245
P+LHPE+FV LGI+PPKGVL +GPPGTGKTL ARAVANRTDACFIRVIGSELVQKYVGE
Sbjct: 235 TPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGE 294
Query: 246 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDAR 305
GARMVRELF+MAR+KKAC++FFDE+DAIGGARFDDG GGDNEVQRTMLE++NQLDGFD R
Sbjct: 295 GARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPR 354
Query: 306 GNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFEL 365
GNIKVLMATNRPDTLDPAL+RPGRLDRK+EF LPDLE RT IFKIH R+M+ ERDIRFEL
Sbjct: 355 GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFEL 414
Query: 366 LSRLCPNSTG 375
L+RLCPNSTG
Sbjct: 415 LARLCPNSTG 424
>UNIPROTKB|Q4R4R0 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9541 "Macaca fascicularis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q9WZ49
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
EMBL:AB169834 ProteinModelPortal:Q4R4R0 SMR:Q4R4R0 PRIDE:Q4R4R0
Uniprot:Q4R4R0
Length = 433
Score = 1585 (563.0 bits), Expect = 8.1e-163, P = 8.1e-163
Identities = 299/370 (80%), Positives = 332/370 (89%)
Query: 6 EDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGL 65
EDE KD+K R LDE DIALLKTYG YS IK+ E +I+ + KK+N+L GIKESDTGL
Sbjct: 14 EDE-KDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGL 72
Query: 66 AAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPT 125
A P+ WDL +DKQ +Q EQPLQVARCTKIIN +SED KY+INVKQ AKFVV L D+V+PT
Sbjct: 73 APPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPT 132
Query: 126 DIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVE 185
DIEEGMRVGVDRNKYQI IPLPPKIDP+VTMM VEEKPDVTY+DVGGCKEQIEK+REVVE
Sbjct: 133 DIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVE 192
Query: 186 LPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGE 245
P+LHPE+FV LGI+PPKGVL +GPPGTGKTL ARAVANRTDACFIRVIGSELVQKYVGE
Sbjct: 193 TPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGE 252
Query: 246 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDAR 305
GARMVRELF+MAR+KKAC++FFDE+DAIGGARFDDG GGDNEVQRTMLE++NQLDGFD R
Sbjct: 253 GARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPR 312
Query: 306 GNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFEL 365
GNIKVLMATNRPDTLDPAL+RPGRLDRK+EF LPDLE RT IFKIH R+M+ ERDIRFEL
Sbjct: 313 GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFEL 372
Query: 366 LSRLCPNSTG 375
L+RLCPNSTG
Sbjct: 373 LARLCPNSTG 382
>MGI|MGI:109555 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit,
ATPase 2" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0017025 "TBP-class protein binding"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] [GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
MGI:MGI:109555 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
OrthoDB:EOG4RXZ05 ChiTaRS:PSMC2 EMBL:AK005083 EMBL:AK168548
EMBL:BC005462 EMBL:U61283 IPI:IPI00270326 PIR:S39349
UniGene:Mm.2462 ProteinModelPortal:P46471 SMR:P46471 IntAct:P46471
STRING:P46471 PhosphoSite:P46471 REPRODUCTION-2DPAGE:P46471
SWISS-2DPAGE:P46471 PaxDb:P46471 PRIDE:P46471 InParanoid:P46471
Bgee:P46471 Genevestigator:P46471 GermOnline:ENSMUSG00000028932
Uniprot:P46471
Length = 433
Score = 1583 (562.3 bits), Expect = 1.3e-162, P = 1.3e-162
Identities = 297/370 (80%), Positives = 332/370 (89%)
Query: 6 EDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGL 65
++E KD+K R LDE DIALLKTYG YS IK+ E +I+ + KK+N+L GIKESDTGL
Sbjct: 13 KEEEKDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGL 72
Query: 66 AAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPT 125
A P+ WDL +DKQ +Q EQPLQVARCTKIIN +SED KY+INVKQ AKFVV L D+V+PT
Sbjct: 73 APPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPT 132
Query: 126 DIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVE 185
DIEEGMRVGVDRNKYQI IPLPPKIDP+VTMM VEEKPDVTY+DVGGCKEQIEK+REVVE
Sbjct: 133 DIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVE 192
Query: 186 LPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGE 245
P+LHPE+FV LGI+PPKGVL +GPPGTGKTL ARAVANRTDACFIRVIGSELVQKYVGE
Sbjct: 193 TPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGE 252
Query: 246 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDAR 305
GARMVRELF+MAR+KKAC++FFDE+DAIGGARFDDG GGDNEVQRTMLE++NQLDGFD R
Sbjct: 253 GARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPR 312
Query: 306 GNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFEL 365
GNIKVLMATNRPDTLDPAL+RPGRLDRK+EF LPDLE RT IFKIH R+M+ ERDIRFEL
Sbjct: 313 GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFEL 372
Query: 366 LSRLCPNSTG 375
L+RLCPNSTG
Sbjct: 373 LARLCPNSTG 382
>UNIPROTKB|P46472 [details] [associations]
symbol:psmc2 "26S protease regulatory subunit 7"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:X80157 EMBL:BC054143 PIR:S53709
RefSeq:NP_001084136.1 UniGene:Xl.57157 ProteinModelPortal:P46472
GeneID:399327 KEGG:xla:399327 Xenbase:XB-GENE-1000023
Uniprot:P46472
Length = 433
Score = 1579 (560.9 bits), Expect = 3.5e-162, P = 3.5e-162
Identities = 296/370 (80%), Positives = 332/370 (89%)
Query: 6 EDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGL 65
++E K++K R LDE DIALLKTYG YS IK+ E +I+ + KK+N+L GIKESDTGL
Sbjct: 13 KEEEKEDKPIRSLDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGL 72
Query: 66 AAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPT 125
A P+ WDL +DKQ +Q EQPLQVARCTKIIN +SED KY+INVKQ AKFVV L D+V+PT
Sbjct: 73 APPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPT 132
Query: 126 DIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVE 185
DIEEGMRVGVDRNKYQI IPLPPKIDP+VTMM VEEKPDVTY+DVGGCKEQIEK+REVVE
Sbjct: 133 DIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVE 192
Query: 186 LPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGE 245
P+LHPE+FV LGI+PPKGVL +GPPGTGKTL ARAVANRTDACFIRVIGSELVQKYVGE
Sbjct: 193 TPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGE 252
Query: 246 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDAR 305
GARMVRELF+MAR+KKAC++FFDE+DAIGGARFDDG GGDNEVQRTMLE++NQLDGFD R
Sbjct: 253 GARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPR 312
Query: 306 GNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFEL 365
GNIKVLMATNRPDTLDPAL+RPGRLDRK+EF LPDLE RT IFKIH R+M+ ERDIRFEL
Sbjct: 313 GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFEL 372
Query: 366 LSRLCPNSTG 375
L+RLCPNSTG
Sbjct: 373 LARLCPNSTG 382
>ZFIN|ZDB-GENE-040426-1327 [details] [associations]
symbol:psmc2 "proteasome (prosome, macropain) 26S
subunit, ATPase 2" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040426-1327 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03061 OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978
OrthoDB:EOG4RXZ05 HSSP:Q9LCZ4 EMBL:BX571796 EMBL:BC053187
IPI:IPI00491385 RefSeq:NP_957260.1 UniGene:Dr.75589 STRING:Q7T3B1
Ensembl:ENSDART00000019647 GeneID:393941 KEGG:dre:393941
InParanoid:Q7T3B1 NextBio:20814913 Uniprot:Q7T3B1
Length = 433
Score = 1579 (560.9 bits), Expect = 3.5e-162, P = 3.5e-162
Identities = 296/370 (80%), Positives = 332/370 (89%)
Query: 6 EDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGL 65
++E K++K R LDE DIALLKTYG YS IK+ E +I+ + KK+N+L GIKESDTGL
Sbjct: 13 KEEEKEDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGL 72
Query: 66 AAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPT 125
A P+ WDL +DKQ +Q EQPLQVARCTKIIN +SED KY+INVKQ AKFVV L D+V+PT
Sbjct: 73 APPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPT 132
Query: 126 DIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVE 185
DIEEGMRVGVDRNKYQI IPLPPKIDP+VTMM VEEKPDVTY+DVGGCKEQIEK+REVVE
Sbjct: 133 DIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVE 192
Query: 186 LPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGE 245
P+LHPE+FV LGI+PPKGVL +GPPGTGKTL ARAVANRTDACFIRVIGSELVQKYVGE
Sbjct: 193 TPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGE 252
Query: 246 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDAR 305
GARMVRELF+MAR+KKAC++FFDE+DAIGGARFDDG GGDNEVQRTMLE++NQLDGFD R
Sbjct: 253 GARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPR 312
Query: 306 GNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFEL 365
GNIKVLMATNRPDTLDPAL+RPGRLDRK+EF LPDLE RT IFKIH R+M+ ERDIRFEL
Sbjct: 313 GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFEL 372
Query: 366 LSRLCPNSTG 375
L+RLCPNSTG
Sbjct: 373 LARLCPNSTG 382
>RGD|3428 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit, ATPase
2" species:10116 "Rattus norvegicus" [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA;ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0017025 "TBP-class protein binding"
evidence=IPI] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA;ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03061
CTD:5701 OrthoDB:EOG4RXZ05 EMBL:D50694 EMBL:BC061542 EMBL:U13895
IPI:IPI00421600 RefSeq:NP_150239.1 UniGene:Rn.1202
ProteinModelPortal:Q63347 IntAct:Q63347 MINT:MINT-1794034
STRING:Q63347 PhosphoSite:Q63347 PRIDE:Q63347 GeneID:25581
KEGG:rno:25581 InParanoid:Q63347 NextBio:607227 Genevestigator:Q63347
GermOnline:ENSRNOG00000012026 Uniprot:Q63347
Length = 433
Score = 1578 (560.5 bits), Expect = 4.5e-162, P = 4.5e-162
Identities = 298/370 (80%), Positives = 331/370 (89%)
Query: 6 EDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGL 65
EDE KD+K R LDE DIALLKTYG YS IK+ E +I+ + KK+N+L GIKESDTGL
Sbjct: 14 EDE-KDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGL 72
Query: 66 AAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPT 125
A P+ WDL +DKQ +Q EQPLQVARCTKIIN +SED KY+INVKQ AKFVV L D+V+PT
Sbjct: 73 APPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPT 132
Query: 126 DIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVE 185
DIEEGMRVGVDRNKYQI IPLPPKIDP+VTMM VEEKPDVTY+DVGGCKEQIEK+REVVE
Sbjct: 133 DIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVE 192
Query: 186 LPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGE 245
P+LHPE+FV LGI+PPKGVL +GPPGTGKTL ARAVANRTDACFI VIGSELVQKYVGE
Sbjct: 193 TPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIPVIGSELVQKYVGE 252
Query: 246 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDAR 305
GARMVRELF+MAR+KKAC++FFDE+DAIGGARFDDG GGDNEVQRTMLE++NQLDGFD R
Sbjct: 253 GARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPR 312
Query: 306 GNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFEL 365
GNIKVLMATNRPDTLDPAL+RPGRLDRK+EF LPDLE RT IFKIH R+M+ ERDIRFEL
Sbjct: 313 GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFEL 372
Query: 366 LSRLCPNSTG 375
L+RLCPNSTG
Sbjct: 373 LARLCPNSTG 382
>UNIPROTKB|Q63347 [details] [associations]
symbol:Psmc2 "26S protease regulatory subunit 7"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 CTD:5701 OrthoDB:EOG4RXZ05
EMBL:D50694 EMBL:BC061542 EMBL:U13895 IPI:IPI00421600
RefSeq:NP_150239.1 UniGene:Rn.1202 ProteinModelPortal:Q63347
IntAct:Q63347 MINT:MINT-1794034 STRING:Q63347 PhosphoSite:Q63347
PRIDE:Q63347 GeneID:25581 KEGG:rno:25581 InParanoid:Q63347
NextBio:607227 Genevestigator:Q63347 GermOnline:ENSRNOG00000012026
Uniprot:Q63347
Length = 433
Score = 1578 (560.5 bits), Expect = 4.5e-162, P = 4.5e-162
Identities = 298/370 (80%), Positives = 331/370 (89%)
Query: 6 EDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGL 65
EDE KD+K R LDE DIALLKTYG YS IK+ E +I+ + KK+N+L GIKESDTGL
Sbjct: 14 EDE-KDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGL 72
Query: 66 AAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPT 125
A P+ WDL +DKQ +Q EQPLQVARCTKIIN +SED KY+INVKQ AKFVV L D+V+PT
Sbjct: 73 APPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPT 132
Query: 126 DIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVE 185
DIEEGMRVGVDRNKYQI IPLPPKIDP+VTMM VEEKPDVTY+DVGGCKEQIEK+REVVE
Sbjct: 133 DIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVE 192
Query: 186 LPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGE 245
P+LHPE+FV LGI+PPKGVL +GPPGTGKTL ARAVANRTDACFI VIGSELVQKYVGE
Sbjct: 193 TPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIPVIGSELVQKYVGE 252
Query: 246 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDAR 305
GARMVRELF+MAR+KKAC++FFDE+DAIGGARFDDG GGDNEVQRTMLE++NQLDGFD R
Sbjct: 253 GARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPR 312
Query: 306 GNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFEL 365
GNIKVLMATNRPDTLDPAL+RPGRLDRK+EF LPDLE RT IFKIH R+M+ ERDIRFEL
Sbjct: 313 GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFEL 372
Query: 366 LSRLCPNSTG 375
L+RLCPNSTG
Sbjct: 373 LARLCPNSTG 382
>UNIPROTKB|Q5R8D7 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9601 "Pongo abelii" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:CR859816 RefSeq:NP_001126144.1
UniGene:Pab.13078 ProteinModelPortal:Q5R8D7 PRIDE:Q5R8D7
GeneID:100173102 KEGG:pon:100173102 InParanoid:Q5R8D7
Uniprot:Q5R8D7
Length = 433
Score = 1573 (558.8 bits), Expect = 1.5e-161, P = 1.5e-161
Identities = 297/370 (80%), Positives = 330/370 (89%)
Query: 6 EDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGL 65
EDE KD+K R LDE DIALLKTYG YS IK+ E +I+ + KK+N+L GIKESDTGL
Sbjct: 14 EDE-KDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGL 72
Query: 66 AAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPT 125
A P+ WDL +DKQ +Q EQPLQVARCTKII +SED KY+INVKQ AKFVV L D+V+PT
Sbjct: 73 APPALWDLAADKQTLQSEQPLQVARCTKIITADSEDPKYIINVKQFAKFVVDLSDQVAPT 132
Query: 126 DIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVE 185
DIEEGMRVGVDRNKYQI IPLPPKIDP+VTMM VEEKPDVTY+DVGGCKEQIEK+REVVE
Sbjct: 133 DIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVE 192
Query: 186 LPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGE 245
P+LHPE+FV LGI+PPKGVL +GPPGTGKTL ARAVANRTDACFIRVIGSELVQKYVGE
Sbjct: 193 TPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGE 252
Query: 246 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDAR 305
GARMVRELF+MAR+KKAC++FFDE+DAIGGARFDDG GGDNEVQRTMLE++NQLDGFD R
Sbjct: 253 GARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPR 312
Query: 306 GNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFEL 365
GNIKVLMATNRPDTLDPAL+RPGRLDRK+EF LPDLE RT I KIH R+M+ ERDIRFEL
Sbjct: 313 GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHILKIHARSMSVERDIRFEL 372
Query: 366 LSRLCPNSTG 375
L+RLCPNSTG
Sbjct: 373 LARLCPNSTG 382
>UNIPROTKB|F1NFL8 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 OMA:DIRWELI
GeneTree:ENSGT00550000074978 EMBL:AADN02036894 EMBL:AADN02036895
IPI:IPI00821647 Ensembl:ENSGALT00000039595 ArrayExpress:F1NFL8
Uniprot:F1NFL8
Length = 432
Score = 1570 (557.7 bits), Expect = 3.1e-161, P = 3.1e-161
Identities = 295/370 (79%), Positives = 332/370 (89%)
Query: 6 EDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGL 65
++E K++K+ LDE DIALLKTYG YS IK+ E +I+ + KK+N+L GIKESDTGL
Sbjct: 13 KEEEKEDKHSS-LDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGL 71
Query: 66 AAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPT 125
A P+ WDL +DKQ +Q EQPLQVARCTKIIN +SED KY+INVKQ AKFVV L D+V+PT
Sbjct: 72 APPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPT 131
Query: 126 DIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVE 185
DIEEGMRVGVDRNKYQI IPLPPKIDP+VTMM VEEKPDVTY+DVGGCKEQIEK+REVVE
Sbjct: 132 DIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVE 191
Query: 186 LPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGE 245
P+LHPE+FV LGI+PPKGVL +GPPGTGKTL ARAVANRTDACFIRVIGSELVQKYVGE
Sbjct: 192 TPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGE 251
Query: 246 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDAR 305
GARMVRELF+MAR+KKAC++FFDE+DAIGGARFDDG GGDNEVQRTMLE++NQLDGFD R
Sbjct: 252 GARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPR 311
Query: 306 GNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFEL 365
GNIKVLMATNRPDTLDPAL+RPGRLDRK+EF LPDLE RT IFKIH R+M+ ERDIRFEL
Sbjct: 312 GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFEL 371
Query: 366 LSRLCPNSTG 375
L+RLCPNSTG
Sbjct: 372 LARLCPNSTG 381
>UNIPROTKB|E1C4V5 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
EMBL:AADN02036894 EMBL:AADN02036895 IPI:IPI00602342
Ensembl:ENSGALT00000013403 ArrayExpress:E1C4V5 Uniprot:E1C4V5
Length = 424
Score = 1561 (554.6 bits), Expect = 2.8e-160, P = 2.8e-160
Identities = 292/358 (81%), Positives = 324/358 (90%)
Query: 18 LDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDK 77
LDE DIALLKTYG YS IK+ E +I+ + KK+N+L GIKESDTGLA P+ WDL +DK
Sbjct: 16 LDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADK 75
Query: 78 QMMQEEQPLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDR 137
Q +Q EQPLQVARCTKIIN +SED KY+INVKQ AKFVV L D+V+PTDIEEGMRVGVDR
Sbjct: 76 QTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDR 135
Query: 138 NKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKL 197
NKYQI IPLPPKIDP+VTMM VEEKPDVTY+DVGGCKEQIEK+REVVE P+LHPE+FV L
Sbjct: 136 NKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNL 195
Query: 198 GIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMA 257
GI+PPKGVL +GPPGTGKTL ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELF+MA
Sbjct: 196 GIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMA 255
Query: 258 RSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRP 317
R+KKAC++FFDE+DAIGGARFDDG GGDNEVQRTMLE++NQLDGFD RGNIKVLMATNRP
Sbjct: 256 RTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRP 315
Query: 318 DTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
DTLDPAL+RPGRLDRK+EF LPDLE RT IFKIH R+M+ ERDIRFELL+RLCPNSTG
Sbjct: 316 DTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTG 373
>FB|FBgn0028687 [details] [associations]
symbol:Rpt1 "Regulatory particle triple-A ATPase 1"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE013599 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
KO:K03061 OMA:DIRWELI GeneTree:ENSGT00550000074978 HSSP:Q9LCZ4
EMBL:AF145307 EMBL:AY061606 RefSeq:NP_477473.1 UniGene:Dm.3425
SMR:Q7KMQ0 IntAct:Q7KMQ0 STRING:Q7KMQ0 EnsemblMetazoa:FBtr0088947
GeneID:35701 KEGG:dme:Dmel_CG1341 UCSC:CG1341-RA CTD:35701
FlyBase:FBgn0028687 HOGENOM:HOG000237377 InParanoid:Q7KMQ0
OrthoDB:EOG4X3FGQ GenomeRNAi:35701 NextBio:794815 Uniprot:Q7KMQ0
Length = 433
Score = 1555 (552.4 bits), Expect = 1.2e-159, P = 1.2e-159
Identities = 293/369 (79%), Positives = 329/369 (89%)
Query: 7 DEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLA 66
DE K++K + LDE DI LLKTYG Y SIK E++I+ K+VN+L GIKESDTGLA
Sbjct: 15 DE-KEDKEIKSLDEGDIELLKTYGQSQYHKSIKSIEEDIQKAVKQVNELTGIKESDTGLA 73
Query: 67 APSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTD 126
P+ WDL +DKQ++Q EQPLQVARCTKIIN +S+D KY+INVKQ AKFVV L D V+PTD
Sbjct: 74 PPALWDLAADKQILQNEQPLQVARCTKIINADSDDPKYIINVKQFAKFVVDLADSVAPTD 133
Query: 127 IEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVEL 186
IEEGMRVGVDRNKYQI IPLPPKIDP+VTMM VE+KPDVTY+DVGGCKEQIEK+REVVE
Sbjct: 134 IEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEDKPDVTYSDVGGCKEQIEKLREVVET 193
Query: 187 PMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEG 246
P+LHPEKFV LGI+PPKGVL +GPPGTGKTL ARAVANRTDACFIRVIGSELVQKYVGEG
Sbjct: 194 PLLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEG 253
Query: 247 ARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARG 306
ARMVRELF+MARSKKAC++FFDE+DAIGGARFDDG GGDNEVQRTMLE++NQLDGFD RG
Sbjct: 254 ARMVRELFEMARSKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRG 313
Query: 307 NIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELL 366
NIKVLMATNRPDTLDPAL+RPGRLDRKVEFGLPD + R+ IFKIH R+M+ ERDIRF+LL
Sbjct: 314 NIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDQDGRSHIFKIHARSMSVERDIRFDLL 373
Query: 367 SRLCPNSTG 375
+RLCPNSTG
Sbjct: 374 ARLCPNSTG 382
>GENEDB_PFALCIPARUM|PF13_0063 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory
subunit 7, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511
GO:GO:0017111 EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0005838 KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177
RefSeq:XP_001349843.2 ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3
MINT:MINT-1698409 PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA
GeneID:814041 KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500
Uniprot:Q8IEK3
Length = 420
Score = 1516 (538.7 bits), Expect = 1.7e-155, P = 1.7e-155
Identities = 286/376 (76%), Positives = 329/376 (87%)
Query: 9 IKDEKNP--RPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLA 66
+++E N +PLD++DI +LK+YG GPYS +IKK E +I + +N LCG++ESDTGL
Sbjct: 1 MEEETNTQSKPLDDEDINILKSYGSGPYSKTIKKVEGDISGLLVNINKLCGVRESDTGLC 60
Query: 67 APSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTD 126
P+QWDL DKQM+ EEQPLQVARCTKIIN +++ +KY+INVKQIAKFVVGLGDKV+P+D
Sbjct: 61 LPNQWDLQLDKQMLNEEQPLQVARCTKIINADTDQTKYIINVKQIAKFVVGLGDKVAPSD 120
Query: 127 IEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVEL 186
IEEGMRVGVDR KY+IQI LPPKIDPSVTMMTVEEKPD+TYND+GGCKEQ+EK+REVVE+
Sbjct: 121 IEEGMRVGVDRTKYKIQILLPPKIDPSVTMMTVEEKPDITYNDIGGCKEQLEKLREVVEM 180
Query: 187 PMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEG 246
P+L PE+FV LGIDPPKGVL YGPPGTGKTL ARA+ANRTDACFI VIGSELVQKYVGEG
Sbjct: 181 PLLQPERFVTLGIDPPKGVLLYGPPGTGKTLTARAIANRTDACFICVIGSELVQKYVGEG 240
Query: 247 ARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARG 306
ARMVRELFQMA+SKKACI+F DEVDAIGG+R D+ GD+EVQRTMLEIVNQLDGFD RG
Sbjct: 241 ARMVRELFQMAKSKKACILFIDEVDAIGGSRGDESAHGDHEVQRTMLEIVNQLDGFDNRG 300
Query: 307 NIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELL 366
NIKVLMATNRPDTLD AL+RPGR+DR++EF LPDLE RT IFKIH TMN RD+RFELL
Sbjct: 301 NIKVLMATNRPDTLDSALVRPGRIDRRIEFSLPDLEGRTHIFKIHANTMNMSRDVRFELL 360
Query: 367 SRLCPNSTGKHSPFRS 382
+RLCPNSTG S RS
Sbjct: 361 ARLCPNSTG--SDIRS 374
>UNIPROTKB|Q8IEK3 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory subunit 7,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 GO:GO:0017111
EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0005838
KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177 RefSeq:XP_001349843.2
ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3 MINT:MINT-1698409
PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA GeneID:814041
KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500 Uniprot:Q8IEK3
Length = 420
Score = 1516 (538.7 bits), Expect = 1.7e-155, P = 1.7e-155
Identities = 286/376 (76%), Positives = 329/376 (87%)
Query: 9 IKDEKNP--RPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLA 66
+++E N +PLD++DI +LK+YG GPYS +IKK E +I + +N LCG++ESDTGL
Sbjct: 1 MEEETNTQSKPLDDEDINILKSYGSGPYSKTIKKVEGDISGLLVNINKLCGVRESDTGLC 60
Query: 67 APSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTD 126
P+QWDL DKQM+ EEQPLQVARCTKIIN +++ +KY+INVKQIAKFVVGLGDKV+P+D
Sbjct: 61 LPNQWDLQLDKQMLNEEQPLQVARCTKIINADTDQTKYIINVKQIAKFVVGLGDKVAPSD 120
Query: 127 IEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVEL 186
IEEGMRVGVDR KY+IQI LPPKIDPSVTMMTVEEKPD+TYND+GGCKEQ+EK+REVVE+
Sbjct: 121 IEEGMRVGVDRTKYKIQILLPPKIDPSVTMMTVEEKPDITYNDIGGCKEQLEKLREVVEM 180
Query: 187 PMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEG 246
P+L PE+FV LGIDPPKGVL YGPPGTGKTL ARA+ANRTDACFI VIGSELVQKYVGEG
Sbjct: 181 PLLQPERFVTLGIDPPKGVLLYGPPGTGKTLTARAIANRTDACFICVIGSELVQKYVGEG 240
Query: 247 ARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARG 306
ARMVRELFQMA+SKKACI+F DEVDAIGG+R D+ GD+EVQRTMLEIVNQLDGFD RG
Sbjct: 241 ARMVRELFQMAKSKKACILFIDEVDAIGGSRGDESAHGDHEVQRTMLEIVNQLDGFDNRG 300
Query: 307 NIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELL 366
NIKVLMATNRPDTLD AL+RPGR+DR++EF LPDLE RT IFKIH TMN RD+RFELL
Sbjct: 301 NIKVLMATNRPDTLDSALVRPGRIDRRIEFSLPDLEGRTHIFKIHANTMNMSRDVRFELL 360
Query: 367 SRLCPNSTGKHSPFRS 382
+RLCPNSTG S RS
Sbjct: 361 ARLCPNSTG--SDIRS 374
>UNIPROTKB|I3LJ30 [details] [associations]
symbol:I3LJ30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
Ensembl:ENSSSCT00000030050 OMA:WDLAYEN Uniprot:I3LJ30
Length = 434
Score = 1513 (537.7 bits), Expect = 3.5e-155, P = 3.5e-155
Identities = 285/368 (77%), Positives = 321/368 (87%)
Query: 8 EIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAA 67
E+ ++ R LDE DIALLKTYG YS IK+ E +I+ + KK+N+L GIKESDTGLA
Sbjct: 16 ELNRKELLRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLAP 75
Query: 68 PSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDI 127
P+ WDL + Q ++ Q RCTKIIN +SED KY+INVKQ AKFVV L D+V+PTDI
Sbjct: 76 PALWDLAYENQELRSNQAFCRVRCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDI 135
Query: 128 EEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELP 187
EEGMRVGVDRNKYQI IPLPPKIDP+VTMM VEEKPDVTY+DVGGCKEQIEK+REVVE P
Sbjct: 136 EEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETP 195
Query: 188 MLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGA 247
+LHPE+FV LGI+PPKGVL +GPPGTGKTL ARAVANRTDACFIRVIGSELVQKYVGEGA
Sbjct: 196 LLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGA 255
Query: 248 RMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGN 307
RMVRELF+MAR+KKAC++FFDE+DAIGGARFDDG GGDNEVQRTMLE++NQLDGFD RGN
Sbjct: 256 RMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGN 315
Query: 308 IKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLS 367
IKVLMATNRPDTLDPAL+RPGRLDRK+EF LPDLE RT IFKIH R+M+ ERDIRFELL+
Sbjct: 316 IKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLA 375
Query: 368 RLCPNSTG 375
RLCPNSTG
Sbjct: 376 RLCPNSTG 383
>WB|WBGene00004501 [details] [associations]
symbol:rpt-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0016887 GO:GO:0000502 GO:GO:0006511 EMBL:Z78012
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 PIR:T20152
RefSeq:NP_506005.1 ProteinModelPortal:Q18787 SMR:Q18787
IntAct:Q18787 MINT:MINT-212537 STRING:Q18787 PaxDb:Q18787
PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1 EnsemblMetazoa:C52E4.4.2
GeneID:179641 KEGG:cel:CELE_C52E4.4 UCSC:C52E4.4.1 CTD:179641
WormBase:C52E4.4 InParanoid:Q18787 NextBio:906264 Uniprot:Q18787
Length = 435
Score = 1512 (537.3 bits), Expect = 4.4e-155, P = 4.4e-155
Identities = 280/370 (75%), Positives = 324/370 (87%)
Query: 6 EDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGL 65
+D ++EKN + LDE DIA+LK YG GPY+ +K + +I++ KKVN+L G+KESDTGL
Sbjct: 15 DDTKEEEKNFQALDEGDIAVLKRYGQGPYAEQLKTLDADIENCLKKVNELSGVKESDTGL 74
Query: 66 AAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPT 125
A P+ WD+ +DKQ MQ+EQPLQVARCTKII + D +Y+INVKQ AKFVV L D V+PT
Sbjct: 75 APPALWDIAADKQAMQQEQPLQVARCTKIITSDKHDPRYLINVKQFAKFVVDLADSVAPT 134
Query: 126 DIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVE 185
DIEEGMRVGVDRNKYQI +PLP KIDP+VTMM VEEKPDVTY+DVGGCK+QIEK+REVVE
Sbjct: 135 DIEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVEEKPDVTYSDVGGCKDQIEKLREVVE 194
Query: 186 LPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGE 245
P+LHPE++V LGI+PPKGVL YGPPGTGKTL ARAVANRTDACFIRVIGSELVQKYVGE
Sbjct: 195 TPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGE 254
Query: 246 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDAR 305
GARMVRELF+MAR+KKAC++FFDE+DA+GGARFDDG GGDNEVQRTMLE++NQLDGFD R
Sbjct: 255 GARMVRELFEMARTKKACLIFFDEIDAVGGARFDDGQGGDNEVQRTMLELINQLDGFDPR 314
Query: 306 GNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFEL 365
GNIKVLMATNRPDTLDPAL+RPGRLDRKVEF LPDL R I KIH + M+ ERDIR++L
Sbjct: 315 GNIKVLMATNRPDTLDPALMRPGRLDRKVEFALPDLAGRAHILKIHAKQMSVERDIRYDL 374
Query: 366 LSRLCPNSTG 375
L+RLCPNSTG
Sbjct: 375 LARLCPNSTG 384
>UNIPROTKB|Q18787 [details] [associations]
symbol:rpt-1 "26S protease regulatory subunit 7"
species:6239 "Caenorhabditis elegans" [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0016887 GO:GO:0000502
GO:GO:0006511 EMBL:Z78012 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
GeneTree:ENSGT00550000074978 PIR:T20152 RefSeq:NP_506005.1
ProteinModelPortal:Q18787 SMR:Q18787 IntAct:Q18787 MINT:MINT-212537
STRING:Q18787 PaxDb:Q18787 PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1
EnsemblMetazoa:C52E4.4.2 GeneID:179641 KEGG:cel:CELE_C52E4.4
UCSC:C52E4.4.1 CTD:179641 WormBase:C52E4.4 InParanoid:Q18787
NextBio:906264 Uniprot:Q18787
Length = 435
Score = 1512 (537.3 bits), Expect = 4.4e-155, P = 4.4e-155
Identities = 280/370 (75%), Positives = 324/370 (87%)
Query: 6 EDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGL 65
+D ++EKN + LDE DIA+LK YG GPY+ +K + +I++ KKVN+L G+KESDTGL
Sbjct: 15 DDTKEEEKNFQALDEGDIAVLKRYGQGPYAEQLKTLDADIENCLKKVNELSGVKESDTGL 74
Query: 66 AAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPT 125
A P+ WD+ +DKQ MQ+EQPLQVARCTKII + D +Y+INVKQ AKFVV L D V+PT
Sbjct: 75 APPALWDIAADKQAMQQEQPLQVARCTKIITSDKHDPRYLINVKQFAKFVVDLADSVAPT 134
Query: 126 DIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVE 185
DIEEGMRVGVDRNKYQI +PLP KIDP+VTMM VEEKPDVTY+DVGGCK+QIEK+REVVE
Sbjct: 135 DIEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVEEKPDVTYSDVGGCKDQIEKLREVVE 194
Query: 186 LPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGE 245
P+LHPE++V LGI+PPKGVL YGPPGTGKTL ARAVANRTDACFIRVIGSELVQKYVGE
Sbjct: 195 TPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGE 254
Query: 246 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDAR 305
GARMVRELF+MAR+KKAC++FFDE+DA+GGARFDDG GGDNEVQRTMLE++NQLDGFD R
Sbjct: 255 GARMVRELFEMARTKKACLIFFDEIDAVGGARFDDGQGGDNEVQRTMLELINQLDGFDPR 314
Query: 306 GNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFEL 365
GNIKVLMATNRPDTLDPAL+RPGRLDRKVEF LPDL R I KIH + M+ ERDIR++L
Sbjct: 315 GNIKVLMATNRPDTLDPALMRPGRLDRKVEFALPDLAGRAHILKIHAKQMSVERDIRYDL 374
Query: 366 LSRLCPNSTG 375
L+RLCPNSTG
Sbjct: 375 LARLCPNSTG 384
>CGD|CAL0005689 [details] [associations]
symbol:RPT1 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005689 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000078 EMBL:AACQ01000077
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
RefSeq:XP_715876.1 RefSeq:XP_715926.1 ProteinModelPortal:Q5A2A0
STRING:Q5A2A0 GeneID:3642412 GeneID:3642461 KEGG:cal:CaO19.441
KEGG:cal:CaO19.8071 Uniprot:Q5A2A0
Length = 444
Score = 1482 (526.7 bits), Expect = 6.7e-152, P = 6.7e-152
Identities = 286/382 (74%), Positives = 330/382 (86%)
Query: 5 PEDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTG 64
P +E EK PL E DI +LKTYG PY+ S+K+ EK++K + +++ GIKESDTG
Sbjct: 13 PSEEETSEKIT-PLTEGDIQVLKTYGTAPYADSLKEIEKDLKTIEERIKTNQGIKESDTG 71
Query: 65 LAAPSQWDLVSDKQMMQEEQPLQVARCTKIIN---P-------NSED-SKYVINVKQIAK 113
LA P WD++ DKQ MQEEQ LQVARCTKII P N++ SKYVIN+KQIAK
Sbjct: 72 LAPPHLWDVLGDKQRMQEEQSLQVARCTKIIEASQPQQPTGLQNADTKSKYVINIKQIAK 131
Query: 114 FVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGC 173
FVVGLG+++SPTDIEEGMRVGVDR+KY+IQ+PLPP+IDPSVTMMTVEEKPDVTY+DVGGC
Sbjct: 132 FVVGLGERLSPTDIEEGMRVGVDRHKYEIQLPLPPRIDPSVTMMTVEEKPDVTYSDVGGC 191
Query: 174 KEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRV 233
KEQIEK+REVVELP+L PE+FVKLGIDPPKG+L YGPPGTGKTL ARAVANRTDA FIRV
Sbjct: 192 KEQIEKLREVVELPLLSPERFVKLGIDPPKGILLYGPPGTGKTLCARAVANRTDATFIRV 251
Query: 234 IGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTML 293
IGSELVQKYVGEGARMVRELF+MAR+KKACI+FFDEVDAIGGARFDDG GGDNEVQRTML
Sbjct: 252 IGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEVDAIGGARFDDGAGGDNEVQRTML 311
Query: 294 EIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTR 353
E++ QLDGFD RGNIKV+ ATNRP+TLDPALLRPGR+DRKVEF LPDLE R IF+IH++
Sbjct: 312 ELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEGRANIFRIHSK 371
Query: 354 TMNCERDIRFELLSRLCPNSTG 375
TM+ E+DIR+EL+SRLCPN+TG
Sbjct: 372 TMSVEKDIRWELISRLCPNATG 393
>SGD|S000001628 [details] [associations]
symbol:RPT1 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IMP] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IDA] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IPI] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000001628 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:BK006944 GO:GO:0006511 GO:GO:0017111
GO:GO:0045899 GO:GO:0045732 PDB:3VLF PDB:4A3V PDBsum:3VLF
PDBsum:4A3V GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 OrthoDB:EOG4B01XN
EMBL:Z22817 EMBL:X73571 EMBL:Z28145 PIR:S34354 RefSeq:NP_012777.1
ProteinModelPortal:P33299 SMR:P33299 DIP:DIP-2883N IntAct:P33299
MINT:MINT-612502 STRING:P33299 SWISS-2DPAGE:P33299 PaxDb:P33299
PeptideAtlas:P33299 PRIDE:P33299 EnsemblFungi:YKL145W GeneID:853712
KEGG:sce:YKL145W CYGD:YKL145w NextBio:974719 Genevestigator:P33299
GermOnline:YKL145W Uniprot:P33299
Length = 467
Score = 1237 (440.5 bits), Expect = 8.3e-151, Sum P(2) = 8.3e-151
Identities = 228/278 (82%), Positives = 260/278 (93%)
Query: 98 NSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMM 157
+ ED+KYVIN+KQIAKFVVGLG++VSPTDIEEGMRVGVDR+KY I++PLPP+IDPSVTMM
Sbjct: 139 DDEDAKYVINLKQIAKFVVGLGERVSPTDIEEGMRVGVDRSKYNIELPLPPRIDPSVTMM 198
Query: 158 TVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTL 217
TVEEKPDVTY+DVGGCK+QIEK+REVVELP+L PE+F LGIDPPKG+L YGPPGTGKTL
Sbjct: 199 TVEEKPDVTYSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTL 258
Query: 218 LARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGAR 277
ARAVANRTDA FIRVIGSELVQKYVGEGARMVRELF+MAR+KKACI+FFDE+DA+GGAR
Sbjct: 259 CARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGAR 318
Query: 278 FDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFG 337
FDDG GGDNEVQRTMLE++ QLDGFD RGNIKV+ ATNRP+TLDPALLRPGR+DRKVEF
Sbjct: 319 FDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFS 378
Query: 338 LPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
LPDLE R IF+IH+++M+ ER IR+EL+SRLCPNSTG
Sbjct: 379 LPDLEGRANIFRIHSKSMSVERGIRWELISRLCPNSTG 416
Score = 256 (95.2 bits), Expect = 8.3e-151, Sum P(2) = 8.3e-151
Identities = 48/103 (46%), Positives = 68/103 (66%)
Query: 2 AP-EPEDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKE 60
AP E +D+ D+ PL E DI +LK+YG PY+ +K+ E ++KD+ ++ + G+KE
Sbjct: 12 APLEDDDKKPDDDKIVPLTEGDIQVLKSYGAAPYAAKLKQTENDLKDIEARIKEKAGVKE 71
Query: 61 SDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDSK 103
SDTGLA WD++ D+Q + EE PLQVARCTKII N E +
Sbjct: 72 SDTGLAPSHLWDIMGDRQRLGEEHPLQVARCTKIIKGNGESDE 114
>ASPGD|ASPL0000034636 [details] [associations]
symbol:AN2917 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001306
EMBL:AACD01000051 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
OrthoDB:EOG4B01XN RefSeq:XP_660521.1 ProteinModelPortal:Q5B963
STRING:Q5B963 EnsemblFungi:CADANIAT00010170 GeneID:2874156
KEGG:ani:AN2917.2 Uniprot:Q5B963
Length = 443
Score = 1469 (522.2 bits), Expect = 1.6e-150, P = 1.6e-150
Identities = 276/375 (73%), Positives = 322/375 (85%)
Query: 7 DEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLA 66
D+ + EK PL ++DIA+LKTYG PY+ ++KK EK+IK+ VN+ G+KESDTGLA
Sbjct: 18 DDEEPEKKITPLTDEDIAVLKTYGAAPYANALKKLEKQIKERQASVNEKIGVKESDTGLA 77
Query: 67 APSQWDLVSDKQMMQEEQPLQVARCTKIINP--NSEDSKYVINVKQIAKFVVGLGDKVSP 124
P WD+ +D+Q M EEQPLQVARCTKII +S+ SKYVINVKQIAKFVV LG++VSP
Sbjct: 78 PPHLWDVAADRQRMAEEQPLQVARCTKIIQDEKDSDKSKYVINVKQIAKFVVNLGERVSP 137
Query: 125 TDIEEGM----RVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKM 180
TDIEE + R+ VDRNKYQI +PLPPKIDPSVTMMTVE+KPDVTY DVGGCKEQIEK+
Sbjct: 138 TDIEEDLSHTDRLSVDRNKYQIMLPLPPKIDPSVTMMTVEDKPDVTYGDVGGCKEQIEKL 197
Query: 181 REVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQ 240
REVVE+P+L PE+FV LGIDPPKG L YGPPGTGKTL ARAVANRTDA FIRVIGSELVQ
Sbjct: 198 REVVEMPLLSPERFVNLGIDPPKGALLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQ 257
Query: 241 KYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLD 300
KYVGEGARMVRELF+MAR+KKACI+FFDE+DA+GGARFDDG GGDNEVQRTMLE++ QLD
Sbjct: 258 KYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLD 317
Query: 301 GFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERD 360
GFDARGNIKV+ ATNRP TLDPAL+RPGR+DRK+EF LPD+E R I +IH ++M+ ERD
Sbjct: 318 GFDARGNIKVMFATNRPSTLDPALMRPGRIDRKIEFSLPDVEGRANILRIHAKSMSVERD 377
Query: 361 IRFELLSRLCPNSTG 375
IR+EL+SRLCPN+TG
Sbjct: 378 IRWELISRLCPNATG 392
>POMBASE|SPBC16C6.07c [details] [associations]
symbol:rpt1 "19S proteasome regulatory subunit Rpt1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16C6.07c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03061
OMA:DIRWELI PIR:T39558 RefSeq:NP_596805.1 ProteinModelPortal:O42931
IntAct:O42931 STRING:O42931 PRIDE:O42931
EnsemblFungi:SPBC16C6.07c.1 GeneID:2539862 KEGG:spo:SPBC16C6.07c
OrthoDB:EOG4B01XN NextBio:20801008 Uniprot:O42931
Length = 438
Score = 1461 (519.4 bits), Expect = 1.1e-149, P = 1.1e-149
Identities = 277/375 (73%), Positives = 323/375 (86%)
Query: 4 EPED-EIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESD 62
+P D E +++KNP PLDE DI LLK+Y GPY+ + +++ + + K++ND GIKESD
Sbjct: 12 KPVDTEEENDKNPPPLDEGDIELLKSYATGPYARELAAIKEDTEAVLKRINDTVGIKESD 71
Query: 63 TGLAAPSQWDLVSDKQMMQEEQPLQVARCTKII-NPNS-EDSKYVINVKQIAKFVVGLGD 120
TGLA S WD+ +D+Q M EEQPLQVARCTKII N S E + YVIN+KQIAKFVV LG+
Sbjct: 72 TGLAPISFWDVAADRQRMSEEQPLQVARCTKIIENEQSAEKNAYVINLKQIAKFVVSLGE 131
Query: 121 KVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKM 180
+VSPTDIEEGMRVG DRNKY IQ+PLPPKIDPSVTMM VEEKPDVTY DVGGCKEQIE++
Sbjct: 132 RVSPTDIEEGMRVGCDRNKYAIQLPLPPKIDPSVTMMQVEEKPDVTYGDVGGCKEQIERL 191
Query: 181 REVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQ 240
REVVELP+L PE+FVKLGIDPPKG++ YGPPGTGKTL ARAVANRTDA FIRVIGSELVQ
Sbjct: 192 REVVELPLLSPERFVKLGIDPPKGIMLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQ 251
Query: 241 KYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLD 300
KYVGEGARMVRELF+MAR+KKACI+FFDE+DAIGGARFDDG GGDNEVQRTMLE++ QLD
Sbjct: 252 KYVGEGARMVRELFEMARTKKACIIFFDEIDAIGGARFDDGAGGDNEVQRTMLELITQLD 311
Query: 301 GFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERD 360
GFD RGNIKVL ATNRP+TLD AL+RPGR+DRKVEFGLPDLE R I +IH ++M ++D
Sbjct: 312 GFDPRGNIKVLFATNRPNTLDEALMRPGRIDRKVEFGLPDLEGRAHILRIHAKSMAIDKD 371
Query: 361 IRFELLSRLCPNSTG 375
IR+EL++RLCP+ TG
Sbjct: 372 IRWELIARLCPSQTG 386
>UNIPROTKB|B7Z5E2 [details] [associations]
symbol:PSMC2 "cDNA FLJ52353, highly similar to 26S protease
regulatory subunit 7" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0030163 GO:GO:0017111 GO:GO:0008233 EMBL:AC004668
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 UniGene:Hs.437366
HGNC:HGNC:9548 ChiTaRS:PSMC2 EMBL:AC093701 EMBL:AK298821
IPI:IPI01015219 SMR:B7Z5E2 STRING:B7Z5E2 Ensembl:ENST00000544811
Uniprot:B7Z5E2
Length = 296
Score = 1150 (409.9 bits), Expect = 1.0e-116, P = 1.0e-116
Identities = 213/245 (86%), Positives = 232/245 (94%)
Query: 131 MRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLH 190
MRVGVDRNKYQI IPLPPKIDP+VTMM VEEKPDVTY+DVGGCKEQIEK+REVVE P+LH
Sbjct: 1 MRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLH 60
Query: 191 PEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMV 250
PE+FV LGI+PPKGVL +GPPGTGKTL ARAVANRTDACFIRVIGSELVQKYVGEGARMV
Sbjct: 61 PERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMV 120
Query: 251 RELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKV 310
RELF+MAR+KKAC++FFDE+DAIGGARFDDG GGDNEVQRTMLE++NQLDGFD RGNIKV
Sbjct: 121 RELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKV 180
Query: 311 LMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRLC 370
LMATNRPDTLDPAL+RPGRLDRK+EF LPDLE RT IFKIH R+M+ ERDIRFELL+RLC
Sbjct: 181 LMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLC 240
Query: 371 PNSTG 375
PNSTG
Sbjct: 241 PNSTG 245
>FB|FBgn0020369 [details] [associations]
symbol:Rpt6 "Regulatory particle triple-A ATPase 6"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA;NAS] [GO:0000502
"proteasome complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 EMBL:AE014298
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
BRENDA:3.4.25.1 KO:K03066 OMA:QNIKVIM GeneTree:ENSGT00550000074947
EMBL:U97538 EMBL:AF043734 EMBL:AY051732 RefSeq:NP_608447.1
UniGene:Dm.2162 ProteinModelPortal:O18413 SMR:O18413 DIP:DIP-20087N
IntAct:O18413 MINT:MINT-759582 STRING:O18413 PaxDb:O18413
PRIDE:O18413 EnsemblMetazoa:FBtr0077189 GeneID:33105
KEGG:dme:Dmel_CG1489 CTD:33105 FlyBase:FBgn0020369
InParanoid:O18413 OrthoDB:EOG47D7XJ PhylomeDB:O18413
GenomeRNAi:33105 NextBio:781933 Bgee:O18413 GermOnline:CG1489
Uniprot:O18413
Length = 405
Score = 799 (286.3 bits), Expect = 1.6e-79, P = 1.6e-79
Identities = 171/346 (49%), Positives = 228/346 (65%)
Query: 30 GLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVA 89
G G S I+K E+ +A+K +L ++ L A + L + Q++QE Q +
Sbjct: 16 GEGFRSYYIQKIEELQLVVAEKHQNLRRLQAQRNELNAKVRM-LREELQLLQE----QGS 70
Query: 90 RCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPK 149
+++ P + K ++ V KFVV L + D+ RV + Y + LP K
Sbjct: 71 YVGEVVKP-MDKKKVLVKVHPEGKFVVDLDKNIDINDVTPNCRVALRNESYTLHKILPNK 129
Query: 150 IDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYG 209
+DP V++M VE+ PD TY VGG +QI++++EV+ELP+ HPE F LGI PKGVL YG
Sbjct: 130 VDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYG 189
Query: 210 PPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDE 269
PPGTGKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR I+F DE
Sbjct: 190 PPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDE 249
Query: 270 VDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGR 329
+D+IG +R + G GGD+EVQRTMLE++NQLDGF+A NIKV+MATNR D LDPALLRPGR
Sbjct: 250 IDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGR 309
Query: 330 LDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
+DRK+EF P+ E+R I KIH+R MN R I ++ L P ++G
Sbjct: 310 IDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASG 355
>UNIPROTKB|Q4RG45 [details] [associations]
symbol:GSTENG00035021001 "Chromosome 2 SCAF15106, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0000502
GO:GO:0017111 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:CAAE01015106
ProteinModelPortal:Q4RG45 STRING:Q4RG45 Uniprot:Q4RG45
Length = 406
Score = 787 (282.1 bits), Expect = 3.0e-78, P = 3.0e-78
Identities = 157/303 (51%), Positives = 208/303 (68%)
Query: 73 LVSDKQMMQEEQPLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMR 132
L+ ++ + +EQ V +++ + K ++ V KFVV + + D+ R
Sbjct: 58 LLREELQLLQEQGSYVGEVVRVM----DKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCR 113
Query: 133 VGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPE 192
V + + Y + LP K+DP V++M VE+ PD TY +GG +QI++++EV+ELP+ HPE
Sbjct: 114 VALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPE 173
Query: 193 KFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRE 252
F LGI PKGVL YGPPGTGKTLLARAVA+ TD FIRV GSELVQK++GEGARMVRE
Sbjct: 174 LFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRE 233
Query: 253 LFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLM 312
LF MAR I+F DE+D+IG +R + G GGD+EVQRTMLE++NQLDGF+A NIKV+M
Sbjct: 234 LFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIM 293
Query: 313 ATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPN 372
ATNR D LD ALLRPGR+DRK+EF P+ E+R I KIH+R MN R I ++ L P
Sbjct: 294 ATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPG 353
Query: 373 STG 375
++G
Sbjct: 354 ASG 356
>UNIPROTKB|Q6P380 [details] [associations]
symbol:psmc5 "Putative uncharacterized protein MGC75584"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0000502 GO:GO:0017111 GO:GO:0008134
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 CTD:5705 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:BC064153 RefSeq:NP_989358.1 UniGene:Str.3783
ProteinModelPortal:Q6P380 STRING:Q6P380 GeneID:394988
KEGG:xtr:394988 Xenbase:XB-GENE-999928 InParanoid:Q6P380
Uniprot:Q6P380
Length = 414
Score = 787 (282.1 bits), Expect = 3.0e-78, P = 3.0e-78
Identities = 173/377 (45%), Positives = 236/377 (62%)
Query: 1 MAPEPEDEIK-DEKNPRPLDEDDIAL-LKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGI 58
MAP E ++ D +DE + L+ Y Y + I+ + + D K +L +
Sbjct: 1 MAPPGEYKVAGDGMEQMEMDESRGGIGLRQY----YLSKIEDLQLVVND---KSQNLRRL 53
Query: 59 KESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDSKYVINVKQIAKFVVGL 118
+ L A + L+ ++ + +EQ V + + + K ++ V KFVV +
Sbjct: 54 QAQRNELNAKVR--LLREELQLLQEQGSYVGEVVRAM----DKKKVLVKVHPEGKFVVDI 107
Query: 119 GDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIE 178
+ D+ RV + + Y + LP K+DP V++M VE+ PD TY +GG +QI+
Sbjct: 108 DKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIK 167
Query: 179 KMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 238
+++EV+ELP+ HPE F LGI PKGVL YGPPGTGKTLLARAVA+ TD FIRV GSEL
Sbjct: 168 EIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSEL 227
Query: 239 VQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQ 298
VQK++GEGARMVRELF MAR I+F DE+D+IG +R + G GGD+EVQRTMLE++NQ
Sbjct: 228 VQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQ 287
Query: 299 LDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCE 358
LDGF+A NIKV+MATNR D LD ALLRPGR+DRK+EF P+ E+R I KIH+R MN
Sbjct: 288 LDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLT 347
Query: 359 RDIRFELLSRLCPNSTG 375
R I ++ L P ++G
Sbjct: 348 RGINLRKIAELMPGASG 364
>WB|WBGene00018991 [details] [associations]
symbol:F56F11.4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0005737 GO:GO:0040007 GO:GO:0002119
GO:GO:0040011 GO:GO:0040017 GO:GO:0040035 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
EMBL:FO081497 RefSeq:NP_741098.1 ProteinModelPortal:Q8MXF1
SMR:Q8MXF1 STRING:Q8MXF1 PaxDb:Q8MXF1 PRIDE:Q8MXF1
EnsemblMetazoa:F56F11.4b GeneID:175403 KEGG:cel:CELE_F56F11.4
UCSC:F56F11.4b CTD:175403 WormBase:F56F11.4b InParanoid:Q8MXF1
OMA:TITISEN NextBio:888008 ArrayExpress:Q8MXF1 Uniprot:Q8MXF1
Length = 432
Score = 786 (281.7 bits), Expect = 3.8e-78, P = 3.8e-78
Identities = 172/376 (45%), Positives = 234/376 (62%)
Query: 1 MAPEPEDEIKDEKNPRPLDED-DIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIK 59
M P P + + P LD + D L+ Y + T +++AE+ + + + V L +
Sbjct: 22 MGPAPV--FPNSRKPATLDANSDEQTLRPY----FKTKVEQAEQTVAEKSINVRRLMAQQ 75
Query: 60 ESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLG 119
+ G L+ ++ EQ V K + + K ++ K++V +
Sbjct: 76 KELNGKVR-----LLKEEISHLHEQGSHVGEVCKAM----DKKKVLVKNHPDGKYIVDVA 126
Query: 120 DKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEK 179
V + + G RV + + Y I LP K+DP V++M VE+ PD TY VGG QI++
Sbjct: 127 ASVDISTLAAGTRVALRADNYAIHEVLPSKVDPLVSLMMVEKVPDSTYEMVGGLDTQIKE 186
Query: 180 MREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELV 239
++EV+ELP+ HPE F LGI PKGVL YGPPGTGKTLLARAVA+ T+ FIRV GSELV
Sbjct: 187 IKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELV 246
Query: 240 QKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQL 299
QK++GEGARMVRELF MAR I+F DE+D+IG +R + GGD+EVQRTMLE++NQL
Sbjct: 247 QKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSRGGDSEVQRTMLELLNQL 306
Query: 300 DGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCER 359
DGF+A NIKV+MATNR D LD ALLRPGR+DRK+EF PD ++R QI KIH+R MN R
Sbjct: 307 DGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPAPDEKARAQILKIHSRKMNLMR 366
Query: 360 DIRFELLSRLCPNSTG 375
IR + ++ P ++G
Sbjct: 367 GIRMDKIAEQIPGASG 382
>UNIPROTKB|Q6AZU7 [details] [associations]
symbol:Q6AZU7 "Putative uncharacterized protein"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
GO:GO:0000502 GO:GO:0017111 GO:GO:0008134 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:BC077223
ProteinModelPortal:Q6AZU7 Uniprot:Q6AZU7
Length = 414
Score = 785 (281.4 bits), Expect = 4.8e-78, P = 4.8e-78
Identities = 164/335 (48%), Positives = 222/335 (66%)
Query: 44 EIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPL---QVARCTKIINPNSE 100
+I+D+ VND K + + +L + ++++EE L Q + +++ +
Sbjct: 35 KIEDLQLVVND----KSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRA-MD 89
Query: 101 DSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVE 160
K ++ V KFVV + + D+ RV + + Y + LP K+DP V++M VE
Sbjct: 90 KKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVE 149
Query: 161 EKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLAR 220
+ PD TY +GG +QI++++EV+ELP+ HPE F LGI PKGVL YGPPGTGKTLLAR
Sbjct: 150 KVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLAR 209
Query: 221 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDD 280
AVA+ TD FIRV GSELVQK++GEGARMVRELF MAR I+F DE+D+IG +R +
Sbjct: 210 AVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEG 269
Query: 281 GVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPD 340
G GGD+EVQRTMLE++NQLDGF+A NIKV+MATNR D LD ALLRPGR+DRK+EF P+
Sbjct: 270 GSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPN 329
Query: 341 LESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
E+R I KIH+R MN R I ++ L P ++G
Sbjct: 330 EEARLDILKIHSRKMNLTRGINLRKIAELMPGASG 364
>UNIPROTKB|F1NU79 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 EMBL:AADN02056696 IPI:IPI00574684
Ensembl:ENSGALT00000000469 Uniprot:F1NU79
Length = 412
Score = 783 (280.7 bits), Expect = 7.9e-78, P = 7.9e-78
Identities = 157/303 (51%), Positives = 207/303 (68%)
Query: 73 LVSDKQMMQEEQPLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMR 132
L+ ++ + +EQ V + + + K ++ V KFVV + + D+ R
Sbjct: 64 LLREELQLLQEQGSYVGEVVRAM----DKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCR 119
Query: 133 VGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPE 192
V + + Y + LP K+DP V++M VE+ PD TY +GG +QI++++EV+ELP+ HPE
Sbjct: 120 VALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPE 179
Query: 193 KFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRE 252
F LGI PKGVL YGPPGTGKTLLARAVA+ TD FIRV GSELVQK++GEGARMVRE
Sbjct: 180 LFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRE 239
Query: 253 LFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLM 312
LF MAR I+F DE+D+IG +R + G GGD+EVQRTMLE++NQLDGF+A NIKV+M
Sbjct: 240 LFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIM 299
Query: 313 ATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPN 372
ATNR D LD ALLRPGR+DRK+EF P+ E+R I KIH+R MN R I ++ L P
Sbjct: 300 ATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPG 359
Query: 373 STG 375
++G
Sbjct: 360 ASG 362
>UNIPROTKB|P62194 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0031531 "thyrotropin-releasing
hormone receptor binding" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
EMBL:AF069053 EMBL:BC146195 IPI:IPI00717227 RefSeq:NP_776866.1
UniGene:Bt.8062 ProteinModelPortal:P62194 SMR:P62194 STRING:P62194
PRIDE:P62194 Ensembl:ENSBTAT00000028048 GeneID:282015
KEGG:bta:282015 CTD:5705 GeneTree:ENSGT00550000074947
InParanoid:P62194 OrthoDB:EOG4MKNGF NextBio:20805880
ArrayExpress:P62194 GO:GO:0031531 Uniprot:P62194
Length = 406
Score = 783 (280.7 bits), Expect = 7.9e-78, P = 7.9e-78
Identities = 157/303 (51%), Positives = 207/303 (68%)
Query: 73 LVSDKQMMQEEQPLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMR 132
L+ ++ + +EQ V + + + K ++ V KFVV + + D+ R
Sbjct: 58 LLREELQLLQEQGSYVGEVVRAM----DKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCR 113
Query: 133 VGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPE 192
V + + Y + LP K+DP V++M VE+ PD TY +GG +QI++++EV+ELP+ HPE
Sbjct: 114 VALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPE 173
Query: 193 KFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRE 252
F LGI PKGVL YGPPGTGKTLLARAVA+ TD FIRV GSELVQK++GEGARMVRE
Sbjct: 174 LFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRE 233
Query: 253 LFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLM 312
LF MAR I+F DE+D+IG +R + G GGD+EVQRTMLE++NQLDGF+A NIKV+M
Sbjct: 234 LFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIM 293
Query: 313 ATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPN 372
ATNR D LD ALLRPGR+DRK+EF P+ E+R I KIH+R MN R I ++ L P
Sbjct: 294 ATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPG 353
Query: 373 STG 375
++G
Sbjct: 354 ASG 356
>UNIPROTKB|P62195 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043069 "negative regulation of programmed cell
death" evidence=NAS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0003712 "transcription cofactor activity" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:L38810 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0016071 GO:GO:0045892 Reactome:REACT_115566 GO:GO:0045893
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0031410
GO:GO:0016887 GO:GO:0006366 GO:GO:0043069 GO:GO:0051436
EMBL:CH471109 GO:GO:0003712 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 EMBL:AC015651 ChiTaRS:PSMC5 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 KO:K03066
OMA:QNIKVIM CTD:5705 OrthoDB:EOG4MKNGF EMBL:D44467 EMBL:AK290758
EMBL:AK291878 EMBL:BC001932 EMBL:BC002367 EMBL:AF035309
IPI:IPI00023919 PIR:S60343 PIR:S65536 RefSeq:NP_001186092.1
RefSeq:NP_002796.4 UniGene:Hs.79387 PDB:2KRK PDB:3KW6 PDBsum:2KRK
PDBsum:3KW6 ProteinModelPortal:P62195 SMR:P62195 IntAct:P62195
MINT:MINT-5004394 STRING:P62195 PhosphoSite:P62195 DMDM:49065819
PaxDb:P62195 PRIDE:P62195 DNASU:5705 Ensembl:ENST00000310144
Ensembl:ENST00000375812 Ensembl:ENST00000580864
Ensembl:ENST00000581882 GeneID:5705 KEGG:hsa:5705 UCSC:uc002jcb.3
GeneCards:GC17P061904 HGNC:HGNC:9552 HPA:HPA017871 MIM:601681
neXtProt:NX_P62195 PharmGKB:PA33897 InParanoid:P62195
PhylomeDB:P62195 EvolutionaryTrace:P62195 GenomeRNAi:5705
NextBio:22166 ArrayExpress:P62195 Bgee:P62195 CleanEx:HS_PSMC5
Genevestigator:P62195 GermOnline:ENSG00000087191 Uniprot:P62195
Length = 406
Score = 783 (280.7 bits), Expect = 7.9e-78, P = 7.9e-78
Identities = 157/303 (51%), Positives = 207/303 (68%)
Query: 73 LVSDKQMMQEEQPLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMR 132
L+ ++ + +EQ V + + + K ++ V KFVV + + D+ R
Sbjct: 58 LLREELQLLQEQGSYVGEVVRAM----DKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCR 113
Query: 133 VGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPE 192
V + + Y + LP K+DP V++M VE+ PD TY +GG +QI++++EV+ELP+ HPE
Sbjct: 114 VALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPE 173
Query: 193 KFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRE 252
F LGI PKGVL YGPPGTGKTLLARAVA+ TD FIRV GSELVQK++GEGARMVRE
Sbjct: 174 LFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRE 233
Query: 253 LFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLM 312
LF MAR I+F DE+D+IG +R + G GGD+EVQRTMLE++NQLDGF+A NIKV+M
Sbjct: 234 LFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIM 293
Query: 313 ATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPN 372
ATNR D LD ALLRPGR+DRK+EF P+ E+R I KIH+R MN R I ++ L P
Sbjct: 294 ATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPG 353
Query: 373 STG 375
++G
Sbjct: 354 ASG 356
>UNIPROTKB|P62197 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9823 "Sus scrofa" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:X89718 EMBL:X89719 RefSeq:NP_999148.1 UniGene:Ssc.5451
ProteinModelPortal:P62197 SMR:P62197 STRING:P62197 PRIDE:P62197
Ensembl:ENSSSCT00000018819 GeneID:397043 KEGG:ssc:397043 CTD:397043
Uniprot:P62197
Length = 406
Score = 783 (280.7 bits), Expect = 7.9e-78, P = 7.9e-78
Identities = 157/303 (51%), Positives = 207/303 (68%)
Query: 73 LVSDKQMMQEEQPLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMR 132
L+ ++ + +EQ V + + + K ++ V KFVV + + D+ R
Sbjct: 58 LLREELQLLQEQGSYVGEVVRAM----DKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCR 113
Query: 133 VGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPE 192
V + + Y + LP K+DP V++M VE+ PD TY +GG +QI++++EV+ELP+ HPE
Sbjct: 114 VALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPE 173
Query: 193 KFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRE 252
F LGI PKGVL YGPPGTGKTLLARAVA+ TD FIRV GSELVQK++GEGARMVRE
Sbjct: 174 LFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRE 233
Query: 253 LFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLM 312
LF MAR I+F DE+D+IG +R + G GGD+EVQRTMLE++NQLDGF+A NIKV+M
Sbjct: 234 LFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIM 293
Query: 313 ATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPN 372
ATNR D LD ALLRPGR+DRK+EF P+ E+R I KIH+R MN R I ++ L P
Sbjct: 294 ATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPG 353
Query: 373 STG 375
++G
Sbjct: 354 ASG 356
>MGI|MGI:105047 [details] [associations]
symbol:Psmc5 "protease (prosome, macropain) 26S subunit,
ATPase 5" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005675 "holo TFIIH complex" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO;ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0031531 "thyrotropin-releasing hormone receptor
binding" evidence=ISO] [GO:0031595 "nuclear proteasome complex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:105047
GO:GO:0005524 GO:GO:0005737 GO:GO:0045892 GO:GO:0043161
GO:GO:0031410 GO:GO:0017111 GO:GO:0008134 GO:GO:0005675
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03066 OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947
OrthoDB:EOG4MKNGF GO:GO:0031531 EMBL:Z54219 EMBL:AK010505
EMBL:AK135451 EMBL:AK145703 IPI:IPI00135640 PIR:S61923
RefSeq:NP_032976.1 UniGene:Mm.272361 ProteinModelPortal:P62196
SMR:P62196 IntAct:P62196 STRING:P62196 PhosphoSite:P62196
REPRODUCTION-2DPAGE:IPI00135640 REPRODUCTION-2DPAGE:P62196
PaxDb:P62196 PRIDE:P62196 Ensembl:ENSMUST00000021049 GeneID:19184
KEGG:mmu:19184 InParanoid:P62196 NextBio:295882 Bgee:P62196
Genevestigator:P62196 GermOnline:ENSMUSG00000020708 Uniprot:P62196
Length = 406
Score = 783 (280.7 bits), Expect = 7.9e-78, P = 7.9e-78
Identities = 157/303 (51%), Positives = 207/303 (68%)
Query: 73 LVSDKQMMQEEQPLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMR 132
L+ ++ + +EQ V + + + K ++ V KFVV + + D+ R
Sbjct: 58 LLREELQLLQEQGSYVGEVVRAM----DKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCR 113
Query: 133 VGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPE 192
V + + Y + LP K+DP V++M VE+ PD TY +GG +QI++++EV+ELP+ HPE
Sbjct: 114 VALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPE 173
Query: 193 KFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRE 252
F LGI PKGVL YGPPGTGKTLLARAVA+ TD FIRV GSELVQK++GEGARMVRE
Sbjct: 174 LFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRE 233
Query: 253 LFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLM 312
LF MAR I+F DE+D+IG +R + G GGD+EVQRTMLE++NQLDGF+A NIKV+M
Sbjct: 234 LFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIM 293
Query: 313 ATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPN 372
ATNR D LD ALLRPGR+DRK+EF P+ E+R I KIH+R MN R I ++ L P
Sbjct: 294 ATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPG 353
Query: 373 STG 375
++G
Sbjct: 354 ASG 356
>RGD|708376 [details] [associations]
symbol:Psmc5 "proteasome (prosome, macropain) 26S subunit,
ATPase, 5" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO;ISS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;ISS]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA;ISO] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISO;ISS] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:708376 GO:GO:0005524
GO:GO:0005737 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0016887 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066
OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:D83521 EMBL:AB000491 EMBL:AB000493 EMBL:BC058462
IPI:IPI00213587 PIR:T43799 RefSeq:NP_112411.1 UniGene:Rn.10972
ProteinModelPortal:P62198 SMR:P62198 IntAct:P62198 STRING:P62198
PhosphoSite:P62198 World-2DPAGE:0004:P62198 PRIDE:P62198
Ensembl:ENSRNOT00000013997 GeneID:81827 KEGG:rno:81827
UCSC:RGD:708376 InParanoid:P62198 NextBio:615767
ArrayExpress:P62198 Genevestigator:P62198
GermOnline:ENSRNOG00000010038 GO:GO:0031595 Uniprot:P62198
Length = 406
Score = 783 (280.7 bits), Expect = 7.9e-78, P = 7.9e-78
Identities = 157/303 (51%), Positives = 207/303 (68%)
Query: 73 LVSDKQMMQEEQPLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMR 132
L+ ++ + +EQ V + + + K ++ V KFVV + + D+ R
Sbjct: 58 LLREELQLLQEQGSYVGEVVRAM----DKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCR 113
Query: 133 VGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPE 192
V + + Y + LP K+DP V++M VE+ PD TY +GG +QI++++EV+ELP+ HPE
Sbjct: 114 VALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPE 173
Query: 193 KFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRE 252
F LGI PKGVL YGPPGTGKTLLARAVA+ TD FIRV GSELVQK++GEGARMVRE
Sbjct: 174 LFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRE 233
Query: 253 LFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLM 312
LF MAR I+F DE+D+IG +R + G GGD+EVQRTMLE++NQLDGF+A NIKV+M
Sbjct: 234 LFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIM 293
Query: 313 ATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPN 372
ATNR D LD ALLRPGR+DRK+EF P+ E+R I KIH+R MN R I ++ L P
Sbjct: 294 ATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPG 353
Query: 373 STG 375
++G
Sbjct: 354 ASG 356
>WB|WBGene00004506 [details] [associations]
symbol:rpt-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007091 "metaphase/anaphase transition of mitotic cell cycle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0040011 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:Z98866
GO:GO:0007091 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
PIR:T27048 RefSeq:NP_499609.1 ProteinModelPortal:Q9XTT9 SMR:Q9XTT9
DIP:DIP-27139N IntAct:Q9XTT9 MINT:MINT-210855 STRING:Q9XTT9
PaxDb:Q9XTT9 EnsemblMetazoa:Y49E10.1.1 EnsemblMetazoa:Y49E10.1.2
GeneID:176661 KEGG:cel:CELE_Y49E10.1 UCSC:Y49E10.1 CTD:176661
WormBase:Y49E10.1 InParanoid:Q9XTT9 OMA:IDDQIRE NextBio:893504
Uniprot:Q9XTT9
Length = 416
Score = 783 (280.7 bits), Expect = 7.9e-78, P = 7.9e-78
Identities = 166/358 (46%), Positives = 230/358 (64%)
Query: 19 DEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIK-ESDTGLAAPSQWDLVSDK 77
+E D L+ Y +ST + A++++ D ++ V L + E +T + ++ ++
Sbjct: 23 EESDEKTLRKY----FSTKVDDAQQKVADKSQNVRRLQAQRNELNTKVR------MLKEE 72
Query: 78 QMMQEEQPLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDR 137
EQ V +K + + K ++ V K+VV + + + G RV +
Sbjct: 73 LQQLHEQGSYVGEVSKAM----DKKKVLVKVHPEGKYVVDVDKSIDINSLNTGARVALRA 128
Query: 138 NKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKL 197
+ Y + LP K+DP V++M VE+ PD TY VGG +QI++++EV+ELP+ HPE F L
Sbjct: 129 DSYALHKLLPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDAL 188
Query: 198 GIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMA 257
GI PKGVL +GPPGTGKTLLARAVA+ T+ FIRV GSELVQK++GEGARMVRELF MA
Sbjct: 189 GIAQPKGVLLFGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMA 248
Query: 258 RSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRP 317
R I+F DE+D+IG +R + GGD+EVQRTMLE++NQLDGF+A NIKV+MATNR
Sbjct: 249 REHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRI 308
Query: 318 DTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
D LDPALLRPGR+DRK+EF PD ++R I KIH+R MN R I ++ P ++G
Sbjct: 309 DILDPALLRPGRIDRKIEFPAPDEKARADILKIHSRKMNLMRGINMAKIAEQIPGASG 366
>ZFIN|ZDB-GENE-030131-6547 [details] [associations]
symbol:psmc5 "proteasome (prosome, macropain) 26S
subunit, ATPase, 5" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA;ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-6547 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0000502 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM CTD:5705
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:CU459020 EMBL:BC078375 IPI:IPI00482097 RefSeq:NP_001003740.1
UniGene:Dr.75934 STRING:Q6AZC1 Ensembl:ENSDART00000106191
GeneID:445285 KEGG:dre:445285 InParanoid:Q6AZC1 NextBio:20832032
Uniprot:Q6AZC1
Length = 406
Score = 783 (280.7 bits), Expect = 7.9e-78, P = 7.9e-78
Identities = 157/303 (51%), Positives = 207/303 (68%)
Query: 73 LVSDKQMMQEEQPLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMR 132
L+ ++ + +EQ V + + + K ++ V KFVV + + D+ R
Sbjct: 58 LLREELQLLQEQGSYVGEVVRAM----DKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCR 113
Query: 133 VGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPE 192
V + + Y + LP K+DP V++M VE+ PD TY +GG +QI++++EV+ELP+ HPE
Sbjct: 114 VALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPE 173
Query: 193 KFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRE 252
F LGI PKGVL YGPPGTGKTLLARAVA+ TD FIRV GSELVQK++GEGARMVRE
Sbjct: 174 LFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRE 233
Query: 253 LFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLM 312
LF MAR I+F DE+D+IG +R + G GGD+EVQRTMLE++NQLDGF+A NIKV+M
Sbjct: 234 LFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIM 293
Query: 313 ATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPN 372
ATNR D LD ALLRPGR+DRK+EF P+ E+R I KIH+R MN R I ++ L P
Sbjct: 294 ATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPG 353
Query: 373 STG 375
++G
Sbjct: 354 ASG 356
>WB|WBGene00004504 [details] [associations]
symbol:rpt-4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 780 (279.6 bits), Expect = 1.6e-77, P = 1.6e-77
Identities = 154/333 (46%), Positives = 227/333 (68%)
Query: 37 SIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIIN 96
S ++ E +D+ +K+ DL KES+ Q+D S+ + + Q+ +++
Sbjct: 28 SYRRKLAECRDIEQKLKDLRK-KESEM----TKQFDK-SENDIKSLQSVGQIVG--EVLK 79
Query: 97 PNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTM 156
SE+ K+++ ++VVG ++ ++++G RV +D I LP ++DP V
Sbjct: 80 QLSEE-KFIVKATNGPRYVVGCRRSINKEELKQGTRVSLDMTTLTIMRQLPREVDPLVYK 138
Query: 157 MTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKT 216
M+ E+ +++Y+DVGG EQI ++REVVELP+++PE F ++GI PPKG L +GPPGTGKT
Sbjct: 139 MSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKT 198
Query: 217 LLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGA 276
LLARAVA++ D F++V+ S +V KY+GE ARM+RE+F AR + CIVF DE+DAIGG
Sbjct: 199 LLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGGR 258
Query: 277 RFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEF 336
RF +G D E+QRT++E++NQLDGFD+ G +KV+MATNRPDTLDPALLRPGRLDRK+E
Sbjct: 259 RFSEGTSADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEI 318
Query: 337 GLPDLESRTQIFKIHTRTMNCERDIRFELLSRL 369
GLP+ +SR +I KIH+ + +I FE + +L
Sbjct: 319 GLPNEQSRLEILKIHSNKITKHGEIDFEAVVKL 351
>UNIPROTKB|O17071 [details] [associations]
symbol:rpt-4 "Probable 26S protease regulatory subunit 10B"
species:6239 "Caenorhabditis elegans" [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 780 (279.6 bits), Expect = 1.6e-77, P = 1.6e-77
Identities = 154/333 (46%), Positives = 227/333 (68%)
Query: 37 SIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIIN 96
S ++ E +D+ +K+ DL KES+ Q+D S+ + + Q+ +++
Sbjct: 28 SYRRKLAECRDIEQKLKDLRK-KESEM----TKQFDK-SENDIKSLQSVGQIVG--EVLK 79
Query: 97 PNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTM 156
SE+ K+++ ++VVG ++ ++++G RV +D I LP ++DP V
Sbjct: 80 QLSEE-KFIVKATNGPRYVVGCRRSINKEELKQGTRVSLDMTTLTIMRQLPREVDPLVYK 138
Query: 157 MTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKT 216
M+ E+ +++Y+DVGG EQI ++REVVELP+++PE F ++GI PPKG L +GPPGTGKT
Sbjct: 139 MSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKT 198
Query: 217 LLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGA 276
LLARAVA++ D F++V+ S +V KY+GE ARM+RE+F AR + CIVF DE+DAIGG
Sbjct: 199 LLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGGR 258
Query: 277 RFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEF 336
RF +G D E+QRT++E++NQLDGFD+ G +KV+MATNRPDTLDPALLRPGRLDRK+E
Sbjct: 259 RFSEGTSADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEI 318
Query: 337 GLPDLESRTQIFKIHTRTMNCERDIRFELLSRL 369
GLP+ +SR +I KIH+ + +I FE + +L
Sbjct: 319 GLPNEQSRLEILKIHSNKITKHGEIDFEAVVKL 351
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 778 (278.9 bits), Expect = 2.7e-77, P = 2.7e-77
Identities = 168/343 (48%), Positives = 227/343 (66%)
Query: 34 YSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTK 93
Y+ I+ AE I +K +L ++ GL A + L + Q++QE V K
Sbjct: 20 YTQKIQDAELAI---LQKTQNLRRLEAQRNGLNARVRL-LREEIQLLQEPGSY-VGEVIK 74
Query: 94 IINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPS 153
+ N K ++ V K+VV + + +I+ +RV + + YQ+ LP K+DP
Sbjct: 75 TMGKN----KVLVKVHPEGKYVVDISPDIDIKEIKPNIRVALRNDSYQLIKILPNKVDPL 130
Query: 154 VTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGT 213
V++M VE+ PD TY VGG ++QI++++EV+ELP+ HPE F LGI PKG+L YGPPGT
Sbjct: 131 VSLMMVEKIPDSTYEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYGPPGT 190
Query: 214 GKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAI 273
GKTLLARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR I+F DE+D+I
Sbjct: 191 GKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSI 250
Query: 274 GGARFDDGVG-GDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDR 332
G +R D G GD+EVQRTMLE++NQLDGF+A NIKV+MATNR D LDPALLRPGR+DR
Sbjct: 251 GSSRSDSSGGSGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDR 310
Query: 333 KVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
K+EF P E+R +I +IH+R+MN R I + ++ ++G
Sbjct: 311 KIEFPPPSAEARAEILRIHSRSMNLTRGIDLKSIAEKMNGASG 353
>UNIPROTKB|P46470 [details] [associations]
symbol:psmc5 "26S protease regulatory subunit 8"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 KO:K03066 CTD:5705 EMBL:X81986 RefSeq:NP_001081635.1
UniGene:Xl.45 ProteinModelPortal:P46470 PRIDE:P46470 GeneID:397968
KEGG:xla:397968 Uniprot:P46470
Length = 461
Score = 777 (278.6 bits), Expect = 3.4e-77, P = 3.4e-77
Identities = 164/335 (48%), Positives = 222/335 (66%)
Query: 44 EIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPL---QVARCTKIINPNSE 100
+I+D+ VND K + + +L + ++++EE L Q + +++ +
Sbjct: 22 KIEDLQLVVND----KSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRA-MD 76
Query: 101 DSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVE 160
K ++ V KFVV + + D+ RV + + Y + LP K+DP V++M VE
Sbjct: 77 KKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVE 136
Query: 161 EKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLAR 220
+ PD TY +GG +QI++++EV+ELP+ HPE F LGI PKGVL YGPPGTGKTLLAR
Sbjct: 137 KVPDSTYEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLLAR 196
Query: 221 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDD 280
AVA+ TD FIRV GSELVQK++GEGARMVRELF MAR I+F DE+D+IG +R +
Sbjct: 197 AVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIG-SRLEG 255
Query: 281 GVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPD 340
G GGD+EVQRTMLE++NQLDGF+A NIKV+MATNR D LD ALLRPGR+DRK+EF P+
Sbjct: 256 GSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPN 315
Query: 341 LESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
E+R I KIH+R MN R I ++ L P ++G
Sbjct: 316 EEARLDILKIHSRKMNLTRGINLRKIAELMPGASG 350
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 775 (277.9 bits), Expect = 5.5e-77, P = 5.5e-77
Identities = 164/331 (49%), Positives = 218/331 (65%)
Query: 46 KDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDSKYV 105
+ + +K N+L ++ L + + L + Q++QE V K++ N K +
Sbjct: 45 RQLRQKTNNLNRLEAQRNELNSRVRM-LREELQLLQEPGSY-VGEVVKVMGKN----KVL 98
Query: 106 INVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDV 165
+ V K+VV + + T I RV + + Y + + LP K+DP V +M VE+ PD
Sbjct: 99 VKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDS 158
Query: 166 TYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANR 225
TY+ +GG +QI++++EV+ELP+ HPE F LGI PKGVL YGPPGTGKTLLARAVA+
Sbjct: 159 TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHH 218
Query: 226 TDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVG-G 284
TD FIRV GSELVQKY+GEG+RMVRELF MAR I+F DE+D+IG AR + G G G
Sbjct: 219 TDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNG 278
Query: 285 DNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESR 344
D+EVQRTMLE++NQLDGF+A IKVLMATNR D LD ALLRPGR+DRK+EF P+ ESR
Sbjct: 279 DSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESR 338
Query: 345 TQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
I KIH+R MN R I + ++ ++G
Sbjct: 339 FDILKIHSRKMNLMRGIDLKKIAEKMNGASG 369
>TAIR|locus:2147685 [details] [associations]
symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
Length = 419
Score = 771 (276.5 bits), Expect = 1.5e-76, P = 1.5e-76
Identities = 163/311 (52%), Positives = 211/311 (67%)
Query: 72 DLVSDKQMMQEE-QPLQ-----VARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPT 125
+L S +M++EE Q LQ V K++ N K ++ V K+VV + + T
Sbjct: 63 ELNSRVRMLREELQLLQEPGSYVGEVVKVMGKN----KVLVKVHPEGKYVVDIDKSIDIT 118
Query: 126 DIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVE 185
+ RV + + Y + + LP K+DP V +M VE+ PD TY+ +GG +QI++++EV+E
Sbjct: 119 KLTPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIE 178
Query: 186 LPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGE 245
LP+ HPE F LGI PKGVL YGPPGTGKTLLARAVA+ TD FIRV GSELVQKY+GE
Sbjct: 179 LPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGE 238
Query: 246 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVG-GDNEVQRTMLEIVNQLDGFDA 304
G+RMVRELF MAR I+F DE+D+IG AR + G G GD+EVQRTMLE++NQLDGF+A
Sbjct: 239 GSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEA 298
Query: 305 RGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFE 364
IKVLMATNR D LD ALLRPGR+DRK+EF P+ ESR I KIH+R MN R I +
Sbjct: 299 SNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLK 358
Query: 365 LLSRLCPNSTG 375
++ ++G
Sbjct: 359 KIAEKMNGASG 369
>FB|FBgn0028685 [details] [associations]
symbol:Rpt4 "Regulatory particle triple-A ATPase 4"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:1901838 "positive regulation of transcription of nuclear large
rRNA transcript from RNA polymerase I promoter" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0001163 "RNA polymerase I
regulatory region sequence-specific DNA binding" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005875 GO:GO:0022008
GO:GO:0006508 GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 HSSP:Q01853
TIGRFAMs:TIGR01242 GO:GO:0008540 EMBL:AY071182
ProteinModelPortal:Q8SZ19 SMR:Q8SZ19 IntAct:Q8SZ19 STRING:Q8SZ19
PRIDE:Q8SZ19 FlyBase:FBgn0028685 InParanoid:Q8SZ19
OrthoDB:EOG43TX9X ChiTaRS:Rpt4 ArrayExpress:Q8SZ19 Bgee:Q8SZ19
Uniprot:Q8SZ19
Length = 397
Score = 748 (268.4 bits), Expect = 3.6e-76, Sum P(2) = 3.6e-76
Identities = 137/283 (48%), Positives = 201/283 (71%)
Query: 93 KIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDP 152
+++ +ED K+++ ++VVG ++ ++ G RV +D I LP ++DP
Sbjct: 67 EVLKQLTED-KFIVKATNGPRYVVGCRRQLDKAKLKSGTRVALDMTTLTIMRYLPREVDP 125
Query: 153 SVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPG 212
V M+ E+ DVTY+ +GG +QI ++REV+ELP+L+PE F+++GI PPKG L YGPPG
Sbjct: 126 LVYNMSHEDPGDVTYSAIGGLTDQIRELREVIELPLLNPELFLRVGITPPKGCLLYGPPG 185
Query: 213 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDA 272
TGKTLLARAVA++ DA F++V+ S +V KY+GE AR++RE+F AR + CI+F DE+DA
Sbjct: 186 TGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDA 245
Query: 273 IGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDR 332
IGG RF +G D E+QRT++E++NQ+DGFD+ G +K++MATNRPD+LDPALLRPGRLDR
Sbjct: 246 IGGRRFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDSLDPALLRPGRLDR 305
Query: 333 KVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
K+E LP+ ++R +I KIH + +I +E + +L N G
Sbjct: 306 KIEIPLPNEQARLEILKIHALKIAKHGEIDYEAIVKLSDNFNG 348
Score = 38 (18.4 bits), Expect = 3.6e-76, Sum P(2) = 3.6e-76
Identities = 14/50 (28%), Positives = 22/50 (44%)
Query: 4 EPEDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVN 53
E +EIKD E+D+ L++ +G + K E K + K N
Sbjct: 36 EKREEIKDLTKLYDKSENDLKALQS--VGQIVGEVLKQLTEDKFIVKATN 83
Score = 37 (18.1 bits), Expect = 4.6e-76, Sum P(2) = 4.6e-76
Identities = 16/61 (26%), Positives = 27/61 (44%)
Query: 38 IKKAEKEIKDMAK----KVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQ-PLQVARCT 92
+K+ +EIKD+ K NDL + +S + L DK +++ P V C
Sbjct: 34 LKEKREEIKDLTKLYDKSENDLKAL-QSVGQIVGEVLKQLTEDKFIVKATNGPRYVVGCR 92
Query: 93 K 93
+
Sbjct: 93 R 93
>FB|FBgn0039788 [details] [associations]
symbol:Rpt6R "Regulatory particle triple-A ATPase 6-related"
species:7227 "Drosophila melanogaster" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0005737 GO:GO:0005875
GO:GO:0022008 GO:GO:0006200 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
GeneTree:ENSGT00550000074947 EMBL:AY119229 RefSeq:NP_651811.1
UniGene:Dm.13760 SMR:Q9VA54 IntAct:Q9VA54 MINT:MINT-308887
STRING:Q9VA54 EnsemblMetazoa:FBtr0085680 GeneID:43635
KEGG:dme:Dmel_CG2241 UCSC:CG2241-RA CTD:43635 FlyBase:FBgn0039788
InParanoid:Q9VA54 OMA:NDAYSAG OrthoDB:EOG41JWTK GenomeRNAi:43635
NextBio:834976 Uniprot:Q9VA54
Length = 399
Score = 766 (274.7 bits), Expect = 5.0e-76, P = 5.0e-76
Identities = 156/303 (51%), Positives = 207/303 (68%)
Query: 73 LVSDKQMMQEEQPLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMR 132
L+ ++ + +EQ +A K ++ N K ++ V K+VV + ++ D+ R
Sbjct: 52 LLREELQLLQEQGSYIAEVVKPMDKN----KVLVKVHPEGKYVVDVDKTINIKDVTPSSR 107
Query: 133 VGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPE 192
V + Y + LP K+DP V++M VE+ PD TY VGG +QI++++EV+ELP+ HPE
Sbjct: 108 VALRNESYTLHKILPNKVDPLVSLMLVEKVPDSTYEMVGGLDKQIQEIKEVIELPVKHPE 167
Query: 193 KFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRE 252
F LGI PKGVL YGPPGTGKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRE
Sbjct: 168 LFDALGITQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRE 227
Query: 253 LFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLM 312
LF MAR I+F DE+D+IG AR + G G D+EVQRTMLE++NQLDGF+A NIKV+M
Sbjct: 228 LFVMAREHAPSIIFMDEIDSIGSARLETGTG-DSEVQRTMLELLNQLDGFEATKNIKVIM 286
Query: 313 ATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPN 372
ATNR D LD ALLRPGR+DRK+EF P+ E+R I KIH+R MN R I ++ P
Sbjct: 287 ATNRIDVLDQALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAEEMPG 346
Query: 373 STG 375
++G
Sbjct: 347 ASG 349
>SGD|S000003016 [details] [associations]
symbol:RPT6 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IMP] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IGI;IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0019904 "protein domain specific binding"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IPI] [GO:0006289 "nucleotide-excision
repair" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003016
GO:GO:0005524 GO:GO:0005634 GO:GO:0019904 GO:GO:0051091
GO:GO:0043161 EMBL:BK006941 GO:GO:0016887 GO:GO:0006338
GO:GO:0043433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0034515
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03066
OMA:TEILRIH GeneTree:ENSGT00550000074947 OrthoDB:EOG44N21J
EMBL:X66400 EMBL:L01626 EMBL:Z72570 EMBL:AY693135 PIR:S64052
RefSeq:NP_011467.1 ProteinModelPortal:Q01939 SMR:Q01939
DIP:DIP-979N IntAct:Q01939 MINT:MINT-568023 STRING:Q01939
PaxDb:Q01939 PeptideAtlas:Q01939 EnsemblFungi:YGL048C GeneID:852834
KEGG:sce:YGL048C NextBio:972403 Genevestigator:Q01939
GermOnline:YGL048C Uniprot:Q01939
Length = 405
Score = 763 (273.6 bits), Expect = 1.0e-75, P = 1.0e-75
Identities = 161/354 (45%), Positives = 227/354 (64%)
Query: 25 LLKTY--GLGPY-STSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQ 81
+L+T+ G+ PY I++ E +I+ + V L E+ A + + D+ +
Sbjct: 11 VLETHESGIKPYFEQKIQETELKIRSKTENVRRL----EAQRN-ALNDKVRFIKDELRLL 65
Query: 82 EEQPLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQ 141
+E V KI++ D K ++ V+ K++V + ++ D++ RV + + Y
Sbjct: 66 QEPGSYVGEVIKIVS----DKKVLVKVQPEGKYIVDVAKDINVKDLKASQRVCLRSDSYM 121
Query: 142 IQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDP 201
+ L K DP V++M VE+ PD TY+ VGG +QI++++EV+ELP+ HPE F LGI
Sbjct: 122 LHKVLENKADPLVSLMMVEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQ 181
Query: 202 PKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKK 261
PKGV+ YGPPGTGKTLLARAVA+ TD FIRV G+ELVQKY+GEG+RMVRELF MAR
Sbjct: 182 PKGVILYGPPGTGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHA 241
Query: 262 ACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLD 321
I+F DE+D+IG R + GGD+EVQRTMLE++NQLDGF+ NIK++MATNR D LD
Sbjct: 242 PSIIFMDEIDSIGSTRVEGSGGGDSEVQRTMLELLNQLDGFETSKNIKIIMATNRLDILD 301
Query: 322 PALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
PALLRPGR+DRK+EF P + +R +I +IH+R MN R I ++ +G
Sbjct: 302 PALLRPGRIDRKIEFPPPSVAARAEILRIHSRKMNLTRGINLRKVAEKMNGCSG 355
>DICTYBASE|DDB_G0292382 [details] [associations]
symbol:psmC5 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
ProtClustDB:CLSZ2429412 Uniprot:P34124
Length = 403
Score = 758 (271.9 bits), Expect = 3.5e-75, P = 3.5e-75
Identities = 169/350 (48%), Positives = 221/350 (63%)
Query: 27 KTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPL 86
+T G+ Y S K E EIK + +K DL ++ L ++ ++ ++ +
Sbjct: 12 ETKGIKSYYCS-KIEELEIK-VNEKAQDLRRLEAQRNELN--NRVRMLKEELQLLTNPGS 67
Query: 87 QVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPL 146
VA K++ N K ++ V KFVV + V + R + Y + L
Sbjct: 68 HVAEVVKLMGKN----KVLVKVNPEGKFVVDIDPTVDIAKLTPSTRAALKHESYTLHRIL 123
Query: 147 PPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVL 206
P KIDP V++M VE+ PD TY+ VGG +QI++++EV+ELP+ HPE F LGI PKGVL
Sbjct: 124 PNKIDPLVSLMKVEKIPDSTYDMVGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVL 183
Query: 207 CYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVF 266
YGPPGTGKTLLARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR I+F
Sbjct: 184 LYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIF 243
Query: 267 FDEVDAIGGARFDDGVGG-DNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALL 325
DE+D+IG +R + G GG D+EVQRTMLE++NQLDGF++ NIKVLM TNR D LDPALL
Sbjct: 244 MDEIDSIGSSRGESGSGGGDSEVQRTMLELLNQLDGFESTKNIKVLMCTNRIDILDPALL 303
Query: 326 RPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
RPGR+DRK+EF P R I KIH+R MN R I + +S ++G
Sbjct: 304 RPGRIDRKIEFPNPGDAGRLDILKIHSRKMNLTRGINLKKISDKMNGASG 353
>ASPGD|ASPL0000064945 [details] [associations]
symbol:AN6988 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001304 GO:GO:0030163 GO:GO:0017111
EMBL:AACD01000117 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM OrthoDB:EOG44N21J
RefSeq:XP_664592.1 ProteinModelPortal:Q5AXJ2 STRING:Q5AXJ2
EnsemblFungi:CADANIAT00000491 GeneID:2869968 KEGG:ani:AN6988.2
Uniprot:Q5AXJ2
Length = 389
Score = 751 (269.4 bits), Expect = 1.9e-74, P = 1.9e-74
Identities = 147/273 (53%), Positives = 193/273 (70%)
Query: 103 KYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEK 162
K ++ V K+VV + D V + G RV + + Y+++ LP +DP V++M VE+
Sbjct: 67 KVLVKVHPEGKYVVDIADGVDIGKLTVGKRVALLSDSYKLEKMLPSSVDPLVSLMMVEKV 126
Query: 163 PDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAV 222
PD TY+ +GG +QI++++EV+EL + HPE F LGI PKGVL YGPPGTGKTLLARAV
Sbjct: 127 PDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAV 186
Query: 223 ANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGV 282
A+ TD FIRV GSELVQKY+GEG+RMVRELF MAR I+F DE+D+IG +R D
Sbjct: 187 AHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIDSAG 246
Query: 283 GGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLE 342
GD+EVQRTMLE++NQLDGF+ NIK++MATNR D LDPALLRPGR+DRK+EF P +E
Sbjct: 247 SGDSEVQRTMLELLNQLDGFEPTKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVE 306
Query: 343 SRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
+R I +IH+R+MN R I ++ +G
Sbjct: 307 ARADILRIHSRSMNLTRGINLTKIAEKMNGCSG 339
>UNIPROTKB|Q58576 [details] [associations]
symbol:pan "Proteasome-activating nucleotidase"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0003924
"GTPase activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0010498 "proteasomal protein catabolic process" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0043273 "CTPase activity" evidence=IDA] [GO:0043335 "protein
unfolding" evidence=IDA] HAMAP:MF_00553 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003924 GO:GO:0016887 GO:GO:0010498
GO:GO:0022623 GO:GO:0043335 GO:GO:0043273 EMBL:L77117
GenomeReviews:L77117_GR PIR:G64446 RefSeq:NP_248170.1 PDB:3H43
PDB:3H4M PDB:3IPM PDBsum:3H43 PDBsum:3H4M PDBsum:3IPM
ProteinModelPortal:Q58576 SMR:Q58576 PRIDE:Q58576 GeneID:1452074
KEGG:mja:MJ_1176 eggNOG:COG1222 KO:K03420 OMA:RVNERKA
ProtClustDB:PRK03992 EvolutionaryTrace:Q58576 InterPro:IPR023501
TIGRFAMs:TIGR01242 Uniprot:Q58576
Length = 430
Score = 727 (261.0 bits), Expect = 2.9e-74, Sum P(2) = 2.9e-74
Identities = 134/275 (48%), Positives = 193/275 (70%)
Query: 101 DSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVE 160
+ K V+ F+V + V+P D+ G RV +++ + LP D M V+
Sbjct: 103 ERKVVVKSSTGPSFLVNVSHFVNPDDLAPGKRVCLNQQTLTVVDVLPENKDYRAKAMEVD 162
Query: 161 EKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLAR 220
E+P+V Y D+GG ++Q++++REVVELP+ HPE F K+GI+PPKG+L YGPPGTGKTLLA+
Sbjct: 163 ERPNVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAK 222
Query: 221 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDD 280
AVA T+A FIRV+GSELV+K++GEGA +V+++F++A+ K I+F DE+DAI R D
Sbjct: 223 AVATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAKRTDA 282
Query: 281 GVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPD 340
GGD EVQRT+++++ ++DGFDARG++K++ ATNRPD LDPA+LRPGR DR +E PD
Sbjct: 283 LTGGDREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPD 342
Query: 341 LESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
+ R +I KIHTR MN D+ E ++++ G
Sbjct: 343 EKGRLEILKIHTRKMNLAEDVNLEEIAKMTEGCVG 377
Score = 41 (19.5 bits), Expect = 2.9e-74, Sum P(2) = 2.9e-74
Identities = 11/21 (52%), Positives = 13/21 (61%)
Query: 40 KAEKEIKDMAKKVNDLCGIKE 60
K EKEI D + NDL +KE
Sbjct: 23 KEEKEINDNSNLKNDL--LKE 41
>GENEDB_PFALCIPARUM|PFL2345c [details] [associations]
symbol:PFL2345c "tat-binding protein homolog"
species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014188
GO:GO:0006511 HSSP:Q01853 GO:GO:0017111 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM ProtClustDB:CLSZ2429412
RefSeq:XP_001350873.1 ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5
MINT:MINT-1544609 PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA
GeneID:811521 KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900
Uniprot:Q8I4U5
Length = 435
Score = 742 (266.3 bits), Expect = 1.7e-73, P = 1.7e-73
Identities = 162/352 (46%), Positives = 227/352 (64%)
Query: 11 DEKNPRPLDEDDIAL-LKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPS 69
+ KN L+E+ + +K Y Y I++ E I KK+ + ++ L A
Sbjct: 34 NNKNSSALNEEQVQSGIKRY----YELKIEEYESIIN---KKLQNKKRLEAQRNELNARV 86
Query: 70 QWDLVSDKQMMQEEQPLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEE 129
+ +L + Q + E + +I+ P ++ K ++ + K+VV + ++ +
Sbjct: 87 R-ELCDEIQYLLEA----ASYVGEIVKPMGKN-KVLVKINPEGKYVVDIARHINISHCTP 140
Query: 130 GMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPML 189
RV + + Y++ LP K+DP V++M VE+ PD TY VGG +Q+++++EV+ELP+
Sbjct: 141 NTRVALYNDSYKLHKILPSKVDPLVSLMKVEKVPDSTYEMVGGLDQQVKEVKEVIELPVK 200
Query: 190 HPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARM 249
HPE F LGI PKGVL YGPPGTGKTLLARAVA+ TD FIRV GSELVQKY+GEG+RM
Sbjct: 201 HPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRM 260
Query: 250 VRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIK 309
VRELF MAR I+F DE+D+IG R + G GD+EVQRTM+E++NQLDGF++ NIK
Sbjct: 261 VRELFVMAREHAPSIIFMDEIDSIGSQRIE-GEHGDSEVQRTMMELLNQLDGFESTQNIK 319
Query: 310 VLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDI 361
V+M TNR D LD ALLRPGR+DRK+EF P++E+R +I KIH+R MN R I
Sbjct: 320 VIMCTNRIDILDEALLRPGRIDRKIEFPNPNVEARMEILKIHSRKMNLMRGI 371
>UNIPROTKB|Q8I4U5 [details] [associations]
symbol:PFL2345c "Tat-binding protein homolog" species:36329
"Plasmodium falciparum 3D7" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:AE014188 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
ProtClustDB:CLSZ2429412 RefSeq:XP_001350873.1
ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5 MINT:MINT-1544609
PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA GeneID:811521
KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900 Uniprot:Q8I4U5
Length = 435
Score = 742 (266.3 bits), Expect = 1.7e-73, P = 1.7e-73
Identities = 162/352 (46%), Positives = 227/352 (64%)
Query: 11 DEKNPRPLDEDDIAL-LKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPS 69
+ KN L+E+ + +K Y Y I++ E I KK+ + ++ L A
Sbjct: 34 NNKNSSALNEEQVQSGIKRY----YELKIEEYESIIN---KKLQNKKRLEAQRNELNARV 86
Query: 70 QWDLVSDKQMMQEEQPLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEE 129
+ +L + Q + E + +I+ P ++ K ++ + K+VV + ++ +
Sbjct: 87 R-ELCDEIQYLLEA----ASYVGEIVKPMGKN-KVLVKINPEGKYVVDIARHINISHCTP 140
Query: 130 GMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPML 189
RV + + Y++ LP K+DP V++M VE+ PD TY VGG +Q+++++EV+ELP+
Sbjct: 141 NTRVALYNDSYKLHKILPSKVDPLVSLMKVEKVPDSTYEMVGGLDQQVKEVKEVIELPVK 200
Query: 190 HPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARM 249
HPE F LGI PKGVL YGPPGTGKTLLARAVA+ TD FIRV GSELVQKY+GEG+RM
Sbjct: 201 HPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRM 260
Query: 250 VRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIK 309
VRELF MAR I+F DE+D+IG R + G GD+EVQRTM+E++NQLDGF++ NIK
Sbjct: 261 VRELFVMAREHAPSIIFMDEIDSIGSQRIE-GEHGDSEVQRTMMELLNQLDGFESTQNIK 319
Query: 310 VLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDI 361
V+M TNR D LD ALLRPGR+DRK+EF P++E+R +I KIH+R MN R I
Sbjct: 320 VIMCTNRIDILDEALLRPGRIDRKIEFPNPNVEARMEILKIHSRKMNLMRGI 371
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 740 (265.6 bits), Expect = 2.8e-73, P = 2.8e-73
Identities = 143/273 (52%), Positives = 194/273 (71%)
Query: 103 KYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEK 162
K ++ + KF+V + + + +RV + + + + LP K+DP V++M VE+
Sbjct: 79 KVLVKIHPEGKFIVNVTKDIDVKKLTPSIRVCLKPDSHDLYKILPTKVDPLVSLMMVEKV 138
Query: 163 PDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAV 222
PD TY+ VGG +QI++++EV+ELP+ HPE F LGI PKGV+ YGPPGTGKTLLARAV
Sbjct: 139 PDSTYDMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAV 198
Query: 223 ANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGV 282
A+ T+ FIRV GSELVQKY+GEG+RMVRELF MAR I+F DE+D+IG +R +
Sbjct: 199 AHHTECKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSS 258
Query: 283 GGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLE 342
GGD+EVQRTMLE++NQLDGF++ +IK++MATNR D LDPALLRPGR+DRK+EF P +
Sbjct: 259 GGDSEVQRTMLELLNQLDGFESSKDIKIIMATNRLDILDPALLRPGRIDRKIEFPAPTVA 318
Query: 343 SRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
+RT I KIH+R+MN R I ++ +G
Sbjct: 319 ARTDILKIHSRSMNLTRGINLRKIAEKMNGCSG 351
>ZFIN|ZDB-GENE-030131-8730 [details] [associations]
symbol:psmc1a "proteasome (prosome, macropain) 26S
subunit, ATPase, 1a" species:7955 "Danio rerio" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-8730 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 HSSP:P43773
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03062 EMBL:BC049471
IPI:IPI00500900 RefSeq:NP_956327.1 UniGene:Dr.76288
ProteinModelPortal:Q7ZWD1 STRING:Q7ZWD1 GeneID:336786
KEGG:dre:336786 CTD:336786 InParanoid:Q7ZWD1 NextBio:20811903
ArrayExpress:Q7ZWD1 Uniprot:Q7ZWD1
Length = 440
Score = 711 (255.3 bits), Expect = 3.7e-72, Sum P(2) = 3.7e-72
Identities = 137/280 (48%), Positives = 196/280 (70%)
Query: 85 PLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQI 144
P+ V +II +D+ +++ ++ V + V +E G V ++ + +
Sbjct: 106 PMSVGTLEEII----DDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIG 161
Query: 145 PLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKG 204
L DP VT+M VE+ P TY D+GG QI++++E VELP+ HPE + ++GI PPKG
Sbjct: 162 VLMDDTDPLVTVMKVEKAPQETYADIGGLDSQIQEIKESVELPLTHPEYYEEMGIKPPKG 221
Query: 205 VLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACI 264
V+ YG PGTGKTLLA+AVAN+T A F+RV+GSEL+QKY+G+G ++VRELF++A I
Sbjct: 222 VILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSI 281
Query: 265 VFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPAL 324
VF DE+DAIG R+D GG+ E+QRTMLE++NQLDGFD+RG++KV+MATNR +TLDPAL
Sbjct: 282 VFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPAL 341
Query: 325 LRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFE 364
+RPGR+DRK+EF LPD +++ +IF+IHT M D+ +
Sbjct: 342 IRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTVADDVTLD 381
Score = 37 (18.1 bits), Expect = 3.7e-72, Sum P(2) = 3.7e-72
Identities = 6/15 (40%), Positives = 12/15 (80%)
Query: 6 EDEIKDEKNPRPLDE 20
E+ I+D++ +PL+E
Sbjct: 76 EEFIRDQEQMKPLEE 90
>FB|FBgn0036224 [details] [associations]
symbol:Rpt4R "Regulatory particle triple-A ATPase 4-related"
species:7227 "Drosophila melanogaster" [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014296
GO:GO:0006200 GO:GO:0006974 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 EMBL:AY089267 RefSeq:NP_648525.1
UniGene:Dm.5141 SMR:Q9VTQ9 IntAct:Q9VTQ9 MINT:MINT-869141
STRING:Q9VTQ9 EnsemblMetazoa:FBtr0076040 GeneID:39351
KEGG:dme:Dmel_CG7257 UCSC:CG7257-RA CTD:39351 FlyBase:FBgn0036224
InParanoid:Q9VTQ9 OMA:CAIWTEA OrthoDB:EOG4VT4CM GenomeRNAi:39351
NextBio:813228 Uniprot:Q9VTQ9
Length = 398
Score = 729 (261.7 bits), Expect = 4.1e-72, P = 4.1e-72
Identities = 134/277 (48%), Positives = 197/277 (71%)
Query: 93 KIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDP 152
+I+ + D+ +++ ++VVG +++ ++ G RV +D I LP ++DP
Sbjct: 68 EILKQLTPDN-FIVKASNGPRYVVGCRRQINKEKLKPGTRVALDVTTLTIMRYLPREVDP 126
Query: 153 SVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPG 212
V MT E+ +V Y ++GG +QI ++REV+ELP+L+P+ F+++GI PPKG L YGPPG
Sbjct: 127 LVYNMTHEDPGNVNYAEIGGLGQQIRELREVIELPLLNPDIFLRVGISPPKGCLLYGPPG 186
Query: 213 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDA 272
TGKTLLARA+A++ DA F++V+ S +V KY+GE AR++RE+F AR + CI+F DE+DA
Sbjct: 187 TGKTLLARAIASQMDANFLKVVSSAIVDKYIGESARLIREMFAYARDHQPCIIFMDEIDA 246
Query: 273 IGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDR 332
IGG RF +G D E+QRT++E++NQ+DGFDA G +K++MATNRPDTLDPALLRPGRLDR
Sbjct: 247 IGGRRFSEGTSADREIQRTLMELLNQMDGFDALGQVKMIMATNRPDTLDPALLRPGRLDR 306
Query: 333 KVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRL 369
K+E LP+ +R I KIH +N +I +E + +L
Sbjct: 307 KLEIPLPNEVARMDILKIHAEPLNKRGEIDYEAVVKL 343
>ASPGD|ASPL0000032311 [details] [associations]
symbol:AN5747 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0006289 "nucleotide-excision
repair" evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
EnsemblFungi:CADANIAT00003315 Uniprot:C8VFJ3
Length = 393
Score = 727 (261.0 bits), Expect = 6.7e-72, P = 6.7e-72
Identities = 132/276 (47%), Positives = 191/276 (69%)
Query: 100 EDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTV 159
++ ++++ ++VVG KV + +++G RV +D I LP ++DP V M++
Sbjct: 69 DEERFIVKASSGPRYVVGCRSKVDRSKLKQGTRVALDMTTLTIMRMLPREVDPLVYNMSL 128
Query: 160 EEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLA 219
E+ + + +GG +QI ++REV+ELP+ +PE F ++GI PPKGVL YGPPGTGKTLLA
Sbjct: 129 EDPGQINFAGIGGLNDQIRELREVIELPLKNPELFQRVGIKPPKGVLLYGPPGTGKTLLA 188
Query: 220 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFD 279
RAVA+ + F++V+ S +V KY+GE AR++RE+F A+ + CI+F DE+DAIGG RF
Sbjct: 189 RAVASSMETNFLKVVSSAIVDKYIGESARLIREMFGYAKEHEPCIIFMDEIDAIGGRRFS 248
Query: 280 DGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLP 339
+G D E+QRT++E++NQLDGFD G K++MATNRPDTLDPALLR GRLDRK+E LP
Sbjct: 249 EGTSADREIQRTLMELLNQLDGFDYLGKTKIIMATNRPDTLDPALLRAGRLDRKIEIPLP 308
Query: 340 DLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
+ R +I KIH+ T+ E DI FE + ++ G
Sbjct: 309 NEVGRLEILKIHSSTVQMEGDIDFESVVKMSDGLNG 344
>POMBASE|SPCC1682.16 [details] [associations]
symbol:rpt4 "19S proteasome regulatory subunit Rpt4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC1682.16 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0007346 GO:GO:0043161 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0016887 GO:GO:0004175 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PIR:T41073
PIR:T41279 RefSeq:NP_587809.2 ProteinModelPortal:O74445
STRING:O74445 PRIDE:O74445 EnsemblFungi:SPCC1682.16.1
GeneID:2539189 KEGG:spo:SPCC1682.16 OMA:DKERFIV OrthoDB:EOG40KC79
NextBio:20800360 Uniprot:O74445
Length = 388
Score = 726 (260.6 bits), Expect = 8.6e-72, P = 8.6e-72
Identities = 137/306 (44%), Positives = 204/306 (66%)
Query: 72 DLVSDKQMMQEE-QPLQ-VARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEE 129
DLV +++ + LQ V + + + ++++ ++VVG + V + + +
Sbjct: 34 DLVKKYDKTEDDIKSLQSVGQIIGEVLKQLDSERFIVKASSGPRYVVGCRNNVDQSHLVQ 93
Query: 130 GMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPML 189
G+RV +D I LP ++DP V M++E+ D+++ VGG EQI ++REV+ELP+
Sbjct: 94 GVRVSLDMTTLTIMRILPREVDPLVYNMSIEDPGDISFAGVGGLNEQIRELREVIELPLK 153
Query: 190 HPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARM 249
+PE F+++GI PPKGVL YGPPGTGKTLLARAVA F++V+ S +V KY+GE AR+
Sbjct: 154 NPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAASLGVNFLKVVSSAIVDKYIGESARI 213
Query: 250 VRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIK 309
+RE+F A+ + C++F DE+DAIGG RF +G D E+QRT++E++NQ+DGFD G K
Sbjct: 214 IREMFGYAKEHEPCVIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDYLGQTK 273
Query: 310 VLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRL 369
++MATNRPDTLDPALLRPGRLDRK+E LP+ R +I KIH ++ + +I +E L +L
Sbjct: 274 IIMATNRPDTLDPALLRPGRLDRKIEIPLPNEVGRMEILKIHLEKVSKQGEIDYEALVKL 333
Query: 370 CPNSTG 375
+ G
Sbjct: 334 TDGTNG 339
>UNIPROTKB|Q9FXT8 [details] [associations]
symbol:OsRPT4 "Os02g0199900 protein" species:39947 "Oryza
sativa Japonica Group" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0005618
GO:GO:0005730 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:AP008208
EMBL:CM000139 KO:K03064 EMBL:AP004869 TIGRFAMs:TIGR01242
OMA:EHKEVES GO:GO:0008540 ProtClustDB:CLSN2679874 EMBL:AP004812
EMBL:AB033536 RefSeq:NP_001046218.1 UniGene:Os.292 IntAct:Q9FXT8
STRING:Q9FXT8 EnsemblPlants:LOC_Os02g10640.1 GeneID:4328642
KEGG:osa:4328642 Uniprot:Q9FXT8
Length = 400
Score = 725 (260.3 bits), Expect = 1.1e-71, P = 1.1e-71
Identities = 131/283 (46%), Positives = 195/283 (68%)
Query: 93 KIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDP 152
+++ P ++ ++++ ++VVG KV + G RV +D I LP ++DP
Sbjct: 66 EVLRP-LDNERFIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRTLPREVDP 124
Query: 153 SVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPG 212
V M E+ +V+Y+ VGG +QI ++RE +ELP+++PE F+++GI PPKGVL YGPPG
Sbjct: 125 VVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPG 184
Query: 213 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDA 272
TGKTLLARA+A+ DA F++++ S ++ KY+GE AR++RE+F AR + CI+F DE+DA
Sbjct: 185 TGKTLLARAIASNIDANFLKIVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDA 244
Query: 273 IGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDR 332
IGG RF +G D E+QRT++E++NQLDGFD G +K++MATNRPD LDPALLRPGRLDR
Sbjct: 245 IGGRRFSEGTSADREIQRTLMELLNQLDGFDELGKVKMIMATNRPDVLDPALLRPGRLDR 304
Query: 333 KVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
K+E LP+ ++R ++ KIH + +I +E + +L G
Sbjct: 305 KIEIPLPNEQARMEVLKIHAAGIAKHGEIDYEAVVKLAEGFNG 347
>UNIPROTKB|F1NCS8 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 OMA:EHKEVES EMBL:AADN02004069
IPI:IPI00570965 Ensembl:ENSGALT00000020277 ArrayExpress:F1NCS8
Uniprot:F1NCS8
Length = 403
Score = 724 (259.9 bits), Expect = 1.4e-71, P = 1.4e-71
Identities = 145/338 (42%), Positives = 213/338 (63%)
Query: 42 EKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCT-KIINP--- 97
+K ++D KK L KE D L + KQ + E L+ + +I+
Sbjct: 20 DKALQDYRKK---LLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLK 76
Query: 98 NSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMM 157
+ K+++ ++VVG ++ + ++ G RV +D I LP ++DP V M
Sbjct: 77 QLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNM 136
Query: 158 TVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTL 217
+ E+ DV+Y+++GG EQI ++REV+ELP+ +PE F ++GI PPKG L YGPPGTGKTL
Sbjct: 137 SHEDPGDVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTL 196
Query: 218 LARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGAR 277
LARAVA++ D F++V+ S +V KY+GE AR++RE+F AR + CI+F DE+DAIGG R
Sbjct: 197 LARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRR 256
Query: 278 FDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFG 337
F +G D E+QRT++E++NQ+DGFD +K++MATNRPDTLDPALLRPGRLDRK+
Sbjct: 257 FSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHID 316
Query: 338 LPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
LP+ ++R I KIH + +I +E + +L G
Sbjct: 317 LPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNG 354
>UNIPROTKB|Q5ZKX2 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826 EMBL:AADN02004069
EMBL:AJ719962 IPI:IPI00820938 RefSeq:NP_001006494.1
UniGene:Gga.16005 STRING:Q5ZKX2 Ensembl:ENSGALT00000037197
GeneID:423586 KEGG:gga:423586 InParanoid:Q5ZKX2 NextBio:20826039
Uniprot:Q5ZKX2
Length = 389
Score = 724 (259.9 bits), Expect = 1.4e-71, P = 1.4e-71
Identities = 145/338 (42%), Positives = 213/338 (63%)
Query: 42 EKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCT-KIINP--- 97
+K ++D KK L KE D L + KQ + E L+ + +I+
Sbjct: 6 DKALQDYRKK---LLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLK 62
Query: 98 NSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMM 157
+ K+++ ++VVG ++ + ++ G RV +D I LP ++DP V M
Sbjct: 63 QLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNM 122
Query: 158 TVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTL 217
+ E+ DV+Y+++GG EQI ++REV+ELP+ +PE F ++GI PPKG L YGPPGTGKTL
Sbjct: 123 SHEDPGDVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTL 182
Query: 218 LARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGAR 277
LARAVA++ D F++V+ S +V KY+GE AR++RE+F AR + CI+F DE+DAIGG R
Sbjct: 183 LARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRR 242
Query: 278 FDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFG 337
F +G D E+QRT++E++NQ+DGFD +K++MATNRPDTLDPALLRPGRLDRK+
Sbjct: 243 FSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHID 302
Query: 338 LPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
LP+ ++R I KIH + +I +E + +L G
Sbjct: 303 LPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNG 340
>ZFIN|ZDB-GENE-030131-304 [details] [associations]
symbol:psmc6 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-304 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0000502 GO:GO:0017111
GO:GO:0008233 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
GeneTree:ENSGT00550000074826 OMA:NAPFDPE EMBL:BX936454
EMBL:AL954679 EMBL:BC083283 EMBL:BC152260 EMBL:BC155769
EMBL:AY648827 IPI:IPI00507865 RefSeq:NP_001003832.1
UniGene:Dr.32860 STRING:Q6DRD2 Ensembl:ENSDART00000053834
GeneID:321585 KEGG:dre:321585 InParanoid:Q6DRD2 NextBio:20807435
Uniprot:Q6DRD2
Length = 389
Score = 724 (259.9 bits), Expect = 1.4e-71, P = 1.4e-71
Identities = 146/338 (43%), Positives = 213/338 (63%)
Query: 42 EKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCT-KIINP--- 97
EK ++D KK L KE D L + KQ + E L+ + +I+
Sbjct: 6 EKGLQDYRKK---LLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLK 62
Query: 98 NSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMM 157
+ K+++ ++VVG ++ + ++ G RV +D I LP ++DP V M
Sbjct: 63 QLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNM 122
Query: 158 TVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTL 217
+ E+ V+Y+++GG EQI ++REV+ELP+ +PE F ++GI PPKG L YGPPGTGKTL
Sbjct: 123 SHEDPGSVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTL 182
Query: 218 LARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGAR 277
LARAVA++ D F++V+ S +V KY+GE AR++RE+F AR + CI+F DE+DAIGG R
Sbjct: 183 LARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRR 242
Query: 278 FDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFG 337
F +G D E+QRT++E++NQ+DGFD +K++MATNRPDTLDPALLRPGRLDRK+
Sbjct: 243 FSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIE 302
Query: 338 LPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
LP+ ++R I KIH+ + DI +E + +L G
Sbjct: 303 LPNEQARLDILKIHSGPITKHGDIDYEAIVKLSDGFNG 340
>FB|FBgn0015282 [details] [associations]
symbol:Rpt2 "Regulatory particle triple-A ATPase 2"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=IDA]
[GO:0005838 "proteasome regulatory particle" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0006508 GO:GO:0006974
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000022
eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540 KO:K03062
OMA:FIRNQER GeneTree:ENSGT00550000074818 EMBL:U39303 EMBL:AY058759
RefSeq:NP_524469.2 UniGene:Dm.2368 ProteinModelPortal:P48601
SMR:P48601 DIP:DIP-17276N IntAct:P48601 MINT:MINT-817128
STRING:P48601 PaxDb:P48601 PRIDE:P48601 EnsemblMetazoa:FBtr0084520
GeneID:42828 KEGG:dme:Dmel_CG5289 CTD:42828 FlyBase:FBgn0015282
InParanoid:P48601 OrthoDB:EOG4R4XJ3 PhylomeDB:P48601
BRENDA:3.4.25.1 ChiTaRS:Pros26.4 GenomeRNAi:42828 NextBio:830777
Bgee:P48601 GermOnline:CG5289 Uniprot:P48601
Length = 439
Score = 723 (259.6 bits), Expect = 1.8e-71, P = 1.8e-71
Identities = 138/283 (48%), Positives = 198/283 (69%)
Query: 85 PLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQI 144
P+ V +II +D+ +++ ++ V + V +E G V ++ + +
Sbjct: 105 PMSVGNLEEII----DDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVG 160
Query: 145 PLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKG 204
L DP VT+M +E+ P TY D+GG QI++++E VELP+ HPE + ++GI PPKG
Sbjct: 161 VLSDDTDPMVTVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKG 220
Query: 205 VLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACI 264
V+ YGPPGTGKTLLA+AVAN+T A F+RV+GSEL+QKY+G+G ++VRELF++A I
Sbjct: 221 VILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSI 280
Query: 265 VFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPAL 324
VF DE+DA+G R+D GG+ E+QRTMLE++NQLDGFD+RG++KV+MATNR +TLDPAL
Sbjct: 281 VFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPAL 340
Query: 325 LRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRF-ELL 366
+RPGR+DRK+EF LPD +++ +IF IHT M D+ EL+
Sbjct: 341 IRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAEDVNLSELI 383
>TAIR|locus:2028200 [details] [associations]
symbol:AT1G45000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0030244
"cellulose biosynthetic process" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005524
GO:GO:0005737 GO:GO:0005618 GO:GO:0005730 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AC007915 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
ProtClustDB:CLSN2679874 EMBL:AY062709 EMBL:AY114673 IPI:IPI00531336
RefSeq:NP_175120.1 UniGene:At.27257 ProteinModelPortal:Q9MAK9
SMR:Q9MAK9 IntAct:Q9MAK9 STRING:Q9MAK9 PaxDb:Q9MAK9 PRIDE:Q9MAK9
EnsemblPlants:AT1G45000.1 GeneID:841065 KEGG:ath:AT1G45000
GeneFarm:2760 TAIR:At1g45000 InParanoid:Q9MAK9 PhylomeDB:Q9MAK9
Uniprot:Q9MAK9
Length = 399
Score = 723 (259.6 bits), Expect = 1.8e-71, P = 1.8e-71
Identities = 132/277 (47%), Positives = 193/277 (69%)
Query: 93 KIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDP 152
+++ P ++ + ++ ++VVG KV + G RV +D I LP ++DP
Sbjct: 65 EVLRP-LDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDP 123
Query: 153 SVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPG 212
V M E+ +++Y+ VGG +QI ++RE +ELP+++PE F+++GI PPKGVL YGPPG
Sbjct: 124 VVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPG 183
Query: 213 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDA 272
TGKTLLARA+A+ DA F++V+ S ++ KY+GE AR++RE+F AR + CI+F DE+DA
Sbjct: 184 TGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDA 243
Query: 273 IGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDR 332
IGG RF +G D E+QRT++E++NQLDGFD G +K++MATNRPD LDPALLRPGRLDR
Sbjct: 244 IGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDR 303
Query: 333 KVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRL 369
K+E LP+ +SR +I KIH + +I +E + +L
Sbjct: 304 KIEIPLPNEQSRMEILKIHASGIAKHGEIDYEAIVKL 340
>TAIR|locus:2159996 [details] [associations]
symbol:RPT4A "regulatory particle triple-A ATPase 4A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AB008264 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123393 EMBL:AF372945 EMBL:AY078040 EMBL:AK220732
IPI:IPI00547512 RefSeq:NP_199115.1 UniGene:At.6532
ProteinModelPortal:Q9SEI3 SMR:Q9SEI3 IntAct:Q9SEI3 STRING:Q9SEI3
PaxDb:Q9SEI3 PRIDE:Q9SEI3 EnsemblPlants:AT5G43010.1 GeneID:834316
KEGG:ath:AT5G43010 GeneFarm:2749 TAIR:At5g43010 InParanoid:Q9SEI3
OMA:NAPFDPE PhylomeDB:Q9SEI3 ProtClustDB:CLSN2679874 Uniprot:Q9SEI3
Length = 399
Score = 723 (259.6 bits), Expect = 1.8e-71, P = 1.8e-71
Identities = 133/283 (46%), Positives = 193/283 (68%)
Query: 93 KIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDP 152
+++ P ++ + ++ ++VVG KV + G RV +D I LP ++DP
Sbjct: 65 EVLRP-LDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDP 123
Query: 153 SVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPG 212
V M E+ +++Y+ VGG +QI ++RE +ELP+++PE F+++GI PPKGVL YGPPG
Sbjct: 124 VVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPG 183
Query: 213 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDA 272
TGKTLLARA+A+ DA F++V+ S ++ KY+GE AR++RE+F AR + CI+F DE+DA
Sbjct: 184 TGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDA 243
Query: 273 IGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDR 332
IGG RF +G D E+QRT++E++NQLDGFD G +K++MATNRPD LDPALLRPGRLDR
Sbjct: 244 IGGRRFSEGTSADREIQRTLMELLNQLDGFDNLGKVKMIMATNRPDVLDPALLRPGRLDR 303
Query: 333 KVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
K+E LP+ +SR I KIH + +I +E + +L G
Sbjct: 304 KIEIPLPNEQSRMDILKIHAAGIAKHGEIDYEAIVKLAEGFNG 346
>TAIR|locus:2079742 [details] [associations]
symbol:RPT5A "regulatory particle triple-A ATPase 5A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0009553 "embryo
sac development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0000502
GO:GO:0017111 GO:GO:0009553 GO:GO:0010498 EMBL:AC009606
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP EMBL:AF081573 EMBL:AF123394 EMBL:AY062705 EMBL:BT000140
IPI:IPI00517001 RefSeq:NP_187204.1 UniGene:At.11513 HSSP:Q9LCZ4
ProteinModelPortal:Q9SEI2 SMR:Q9SEI2 IntAct:Q9SEI2 STRING:Q9SEI2
PaxDb:Q9SEI2 PRIDE:Q9SEI2 EnsemblPlants:AT3G05530.1 GeneID:819718
KEGG:ath:AT3G05530 GeneFarm:2742 TAIR:At3g05530 InParanoid:Q9SEI2
PhylomeDB:Q9SEI2 ProtClustDB:CLSN2679225 Uniprot:Q9SEI2
Length = 424
Score = 722 (259.2 bits), Expect = 2.3e-71, P = 2.3e-71
Identities = 162/369 (43%), Positives = 227/369 (61%)
Query: 19 DEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCG-----IKESDTGLAAPSQWD- 72
+ED +A + T + + + + +K+ A++ N C IKE+ + Q
Sbjct: 13 EEDQLASMSTEDITRATRLLDNEIRILKEDAQRTNLECDSYKEKIKENQEKIKLNKQLPY 72
Query: 73 LVSDKQMMQEEQPLQVAR--CTKIINPNSEDSKYVI---NVKQ-IAKFVVGLGDKVSPTD 126
LV + + E P A I + K V+ + +Q I VVGL V P
Sbjct: 73 LVGNIVEILEMNPEDDAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGL---VDPDS 129
Query: 127 IEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVEL 186
++ G VGV+++ Y I LP + D V M V+EKP YND+GG ++QI+++ E + L
Sbjct: 130 LKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVL 189
Query: 187 PMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEG 246
PM H E+F KLG+ PPKGVL YGPPGTGKTL+ARA A +T+A F+++ G +LVQ ++G+G
Sbjct: 190 PMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDG 249
Query: 247 ARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARG 306
A++VR+ FQ+A+ K CI+F DE+DAIG RFD V GD EVQRTMLE++NQLDGF +
Sbjct: 250 AKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDE 309
Query: 307 NIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELL 366
IKV+ ATNR D LDPAL+R GRLDRK+EF P E+R +I +IH+R MN D+ FE L
Sbjct: 310 RIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEEL 369
Query: 367 SRLCPNSTG 375
+R + G
Sbjct: 370 ARSTDDFNG 378
>CGD|CAL0005827 [details] [associations]
symbol:RPT4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0005827 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 RefSeq:XP_717345.1
RefSeq:XP_717434.1 ProteinModelPortal:Q5A6S2 STRING:Q5A6S2
GeneID:3640859 GeneID:3640966 KEGG:cal:CaO19.482
KEGG:cal:CaO19.8112 Uniprot:Q5A6S2
Length = 428
Score = 721 (258.9 bits), Expect = 2.9e-71, P = 2.9e-71
Identities = 139/306 (45%), Positives = 199/306 (65%)
Query: 72 DLVSDKQMMQEE-QPLQ-VARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEE 129
DL D + + + + LQ V + + +D +Y++ +++VG + + +++
Sbjct: 74 DLDKDYEKTENDIKALQSVGQIIGEVLKQLDDERYIVKTSSGPRYIVGCRNTIKKENLKN 133
Query: 130 GMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPML 189
G+RV +D I LP ++DP V MT E ++++N +GG EQI ++REV+ELP+
Sbjct: 134 GVRVSLDMTTLTIMRILPREVDPLVYNMTTFEPGEISFNGIGGLTEQIRELREVIELPLK 193
Query: 190 HPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARM 249
+PE F ++GI PPKGVL YGPPGTGKTLLA+AVA A FI S +V KY+GE AR+
Sbjct: 194 NPELFTRVGIKPPKGVLLYGPPGTGKTLLAKAVAATIGANFIFSPASAIVDKYIGESARL 253
Query: 250 VRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIK 309
+RE+F A+ + CI+F DEVDAIGG RF +G D E+QRT++E++NQ+DGFD G K
Sbjct: 254 IREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLGQTK 313
Query: 310 VLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRL 369
++MATNRPDTLDPALLR GRLDRK+E GLP+ R +IFKIHT + + + FE ++
Sbjct: 314 IIMATNRPDTLDPALLRAGRLDRKIEIGLPNEAGRLEIFKIHTSKVAKQGEFDFEAAVKM 373
Query: 370 CPNSTG 375
G
Sbjct: 374 SDGFNG 379
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 720 (258.5 bits), Expect = 3.7e-71, P = 3.7e-71
Identities = 139/282 (49%), Positives = 198/282 (70%)
Query: 85 PLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQI 144
P+ V +II +D+ +++ ++ V + V +E G V ++ + +
Sbjct: 105 PMSVGTLEEII----DDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIG 160
Query: 145 PLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKG 204
L DP VT+M VE+ P TY D+GG QI++++E VELP+ HPE + ++GI PPKG
Sbjct: 161 VLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKG 220
Query: 205 VLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACI 264
V+ YGPPGTGKTLLA+AVAN+T A F+RV+GSEL+QKY+G+G ++VRELF++A I
Sbjct: 221 VILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSI 280
Query: 265 VFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPAL 324
VF DE+DAIG R+D GG+ E+QRTMLE++NQLDGFD+RG++KV+MATNR +TLDPAL
Sbjct: 281 VFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPAL 340
Query: 325 LRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELL 366
+RPGR+DRK+EF LPD +++ +IF+IHT M D+ + L
Sbjct: 341 IRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDEL 382
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 720 (258.5 bits), Expect = 3.7e-71, P = 3.7e-71
Identities = 139/282 (49%), Positives = 198/282 (70%)
Query: 85 PLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQI 144
P+ V +II +D+ +++ ++ V + V +E G V ++ + +
Sbjct: 104 PMSVGTLEEII----DDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIG 159
Query: 145 PLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKG 204
L DP VT+M VE+ P TY D+GG QI++++E VELP+ HPE + ++GI PPKG
Sbjct: 160 VLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKG 219
Query: 205 VLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACI 264
V+ YGPPGTGKTLLA+AVAN+T A F+RV+GSEL+QKY+G+G ++VRELF++A I
Sbjct: 220 VILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSI 279
Query: 265 VFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPAL 324
VF DE+DAIG R+D GG+ E+QRTMLE++NQLDGFD+RG++KV+MATNR +TLDPAL
Sbjct: 280 VFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPAL 339
Query: 325 LRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELL 366
+RPGR+DRK+EF LPD +++ +IF+IHT M D+ + L
Sbjct: 340 IRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDEL 381
>DICTYBASE|DDB_G0270784 [details] [associations]
symbol:psmC1 "TAT binding protein alpha"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0270784 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0045335
GO:GO:0030587 GO:GO:0000910 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 HSSP:Q9WZ49 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03062 OMA:FIRNQER RefSeq:XP_646726.1 ProteinModelPortal:Q55BV5
STRING:Q55BV5 PRIDE:Q55BV5 EnsemblProtists:DDB0232964
GeneID:8617698 KEGG:ddi:DDB_G0270784 ProtClustDB:PTZ00361
Uniprot:Q55BV5
Length = 439
Score = 719 (258.2 bits), Expect = 4.8e-71, P = 4.8e-71
Identities = 136/292 (46%), Positives = 206/292 (70%)
Query: 75 SDKQMMQEEQ--PLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMR 132
+D+++++E + PL V +II+ N + + + ++ DK + + G
Sbjct: 93 ADEKIIEELRGDPLTVGNLEEIIDDNHAIVSSTVGPEHYVR-IMSFVDK---SKLYLGAT 148
Query: 133 VGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPE 192
V ++ + + ++DP V +M VE+ P +Y+D+GG + Q+++M+E +ELP+ HPE
Sbjct: 149 VLLNNKTLSVVGVIDGEVDPMVNVMKVEKAPTESYSDIGGLEAQVQEMKEAIELPLTHPE 208
Query: 193 KFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRE 252
+ ++GI PPKGV+ YG PGTGKTLLA+AVAN+T A F+RV+GSEL+QKY+G+G ++VRE
Sbjct: 209 LYEEIGIKPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRE 268
Query: 253 LFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLM 312
LF++A IVF DE+DA+G R+D GG+ E+QRTMLE++NQLDGFDAR ++KV+M
Sbjct: 269 LFRVADECAPSIVFIDEIDAVGTKRYDSQSGGEREIQRTMLELLNQLDGFDARTDVKVIM 328
Query: 313 ATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFE 364
ATNR +TLDPAL+RPGR+DRK+EF LPD++++ +IF+IHT MN D+ E
Sbjct: 329 ATNRIETLDPALIRPGRIDRKIEFPLPDIKTKRKIFEIHTAKMNLSEDVNLE 380
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 719 (258.2 bits), Expect = 4.8e-71, P = 4.8e-71
Identities = 138/280 (49%), Positives = 197/280 (70%)
Query: 85 PLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQI 144
P+ V +II +D+ +++ ++ V + V +E G V ++ + +
Sbjct: 106 PMSVGTLEEII----DDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIG 161
Query: 145 PLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKG 204
L DP VT+M VE+ P TY D+GG QI++++E VELP+ HPE + ++GI PPKG
Sbjct: 162 VLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKG 221
Query: 205 VLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACI 264
V+ YGPPGTGKTLLA+AVAN+T A F+RV+GSEL+QKY+G+G ++VRELF++A I
Sbjct: 222 VILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSI 281
Query: 265 VFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPAL 324
VF DE+DAIG R+D GG+ E+QRTMLE++NQLDGFD+RG++KV+MATNR +TLDPAL
Sbjct: 282 VFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPAL 341
Query: 325 LRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFE 364
+RPGR+DRK+EF LPD +++ +IF+IHT M D+ +
Sbjct: 342 IRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLD 381
>UNIPROTKB|F1MLV1 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00707369
UniGene:Bt.22570 GeneTree:ENSGT00550000074826 OMA:EHKEVES
EMBL:DAAA02027846 ProteinModelPortal:F1MLV1 SMR:F1MLV1 PRIDE:F1MLV1
Ensembl:ENSBTAT00000020886 Uniprot:F1MLV1
Length = 389
Score = 719 (258.2 bits), Expect = 4.8e-71, P = 4.8e-71
Identities = 144/338 (42%), Positives = 213/338 (63%)
Query: 42 EKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCT-KIINP--- 97
+K ++D KK L KE D L + KQ + E L+ + +I+
Sbjct: 6 DKALQDYRKK---LLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLK 62
Query: 98 NSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMM 157
+ K+++ ++VVG ++ + ++ G RV +D I LP ++DP V M
Sbjct: 63 QLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNM 122
Query: 158 TVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTL 217
+ E+ +V+Y+++GG EQI ++REV+ELP+ +PE F ++GI PPKG L YGPPGTGKTL
Sbjct: 123 SHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTL 182
Query: 218 LARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGAR 277
LARAVA++ D F++V+ S +V KY+GE AR++RE+F AR + CI+F DE+DAIGG R
Sbjct: 183 LARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRR 242
Query: 278 FDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFG 337
F +G D E+QRT++E++NQ+DGFD +K++MATNRPDTLDPALLRPGRLDRK+
Sbjct: 243 FSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHID 302
Query: 338 LPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
LP+ ++R I KIH + +I +E + +L G
Sbjct: 303 LPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNG 340
>UNIPROTKB|Q2KIW6 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:BC112482
IPI:IPI00707369 RefSeq:NP_001039705.1 UniGene:Bt.22570
ProteinModelPortal:Q2KIW6 STRING:Q2KIW6 PRIDE:Q2KIW6 GeneID:518637
KEGG:bta:518637 CTD:5706 HOGENOM:HOG000225143 InParanoid:Q2KIW6
OrthoDB:EOG408N84 NextBio:20872697 Uniprot:Q2KIW6
Length = 389
Score = 719 (258.2 bits), Expect = 4.8e-71, P = 4.8e-71
Identities = 144/338 (42%), Positives = 213/338 (63%)
Query: 42 EKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCT-KIINP--- 97
+K ++D KK L KE D L + KQ + E L+ + +I+
Sbjct: 6 DKALQDYRKK---LLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLK 62
Query: 98 NSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMM 157
+ K+++ ++VVG ++ + ++ G RV +D I LP ++DP V M
Sbjct: 63 QLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNM 122
Query: 158 TVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTL 217
+ E+ +V+Y+++GG EQI ++REV+ELP+ +PE F ++GI PPKG L YGPPGTGKTL
Sbjct: 123 SHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTL 182
Query: 218 LARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGAR 277
LARAVA++ D F++V+ S +V KY+GE AR++RE+F AR + CI+F DE+DAIGG R
Sbjct: 183 LARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRR 242
Query: 278 FDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFG 337
F +G D E+QRT++E++NQ+DGFD +K++MATNRPDTLDPALLRPGRLDRK+
Sbjct: 243 FSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHID 302
Query: 338 LPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
LP+ ++R I KIH + +I +E + +L G
Sbjct: 303 LPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNG 340
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 719 (258.2 bits), Expect = 4.8e-71, P = 4.8e-71
Identities = 138/280 (49%), Positives = 197/280 (70%)
Query: 85 PLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQI 144
P+ V +II +D+ +++ ++ V + V +E G V ++ + +
Sbjct: 106 PMSVGTLEEII----DDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIG 161
Query: 145 PLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKG 204
L DP VT+M VE+ P TY D+GG QI++++E VELP+ HPE + ++GI PPKG
Sbjct: 162 VLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKG 221
Query: 205 VLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACI 264
V+ YGPPGTGKTLLA+AVAN+T A F+RV+GSEL+QKY+G+G ++VRELF++A I
Sbjct: 222 VILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSI 281
Query: 265 VFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPAL 324
VF DE+DAIG R+D GG+ E+QRTMLE++NQLDGFD+RG++KV+MATNR +TLDPAL
Sbjct: 282 VFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPAL 341
Query: 325 LRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFE 364
+RPGR+DRK+EF LPD +++ +IF+IHT M D+ +
Sbjct: 342 IRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLD 381
>UNIPROTKB|J9P1N0 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:AAEX03016845 Ensembl:ENSCAFT00000019502
Uniprot:J9P1N0
Length = 395
Score = 719 (258.2 bits), Expect = 4.8e-71, P = 4.8e-71
Identities = 144/338 (42%), Positives = 213/338 (63%)
Query: 42 EKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCT-KIINP--- 97
+K ++D KK L KE D L + KQ + E L+ + +I+
Sbjct: 12 DKALQDYRKK---LLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLK 68
Query: 98 NSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMM 157
+ K+++ ++VVG ++ + ++ G RV +D I LP ++DP V M
Sbjct: 69 QLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNM 128
Query: 158 TVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTL 217
+ E+ +V+Y+++GG EQI ++REV+ELP+ +PE F ++GI PPKG L YGPPGTGKTL
Sbjct: 129 SHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTL 188
Query: 218 LARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGAR 277
LARAVA++ D F++V+ S +V KY+GE AR++RE+F AR + CI+F DE+DAIGG R
Sbjct: 189 LARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRR 248
Query: 278 FDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFG 337
F +G D E+QRT++E++NQ+DGFD +K++MATNRPDTLDPALLRPGRLDRK+
Sbjct: 249 FSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHID 308
Query: 338 LPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
LP+ ++R I KIH + +I +E + +L G
Sbjct: 309 LPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNG 346
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 719 (258.2 bits), Expect = 4.8e-71, P = 4.8e-71
Identities = 138/280 (49%), Positives = 197/280 (70%)
Query: 85 PLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQI 144
P+ V +II +D+ +++ ++ V + V +E G V ++ + +
Sbjct: 33 PMSVGTLEEII----DDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIG 88
Query: 145 PLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKG 204
L DP VT+M VE+ P TY D+GG QI++++E VELP+ HPE + ++GI PPKG
Sbjct: 89 VLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKG 148
Query: 205 VLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACI 264
V+ YGPPGTGKTLLA+AVAN+T A F+RV+GSEL+QKY+G+G ++VRELF++A I
Sbjct: 149 VILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSI 208
Query: 265 VFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPAL 324
VF DE+DAIG R+D GG+ E+QRTMLE++NQLDGFD+RG++KV+MATNR +TLDPAL
Sbjct: 209 VFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPAL 268
Query: 325 LRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFE 364
+RPGR+DRK+EF LPD +++ +IF+IHT M D+ +
Sbjct: 269 IRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLD 308
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 719 (258.2 bits), Expect = 4.8e-71, P = 4.8e-71
Identities = 138/280 (49%), Positives = 197/280 (70%)
Query: 85 PLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQI 144
P+ V +II +D+ +++ ++ V + V +E G V ++ + +
Sbjct: 106 PMSVGTLEEII----DDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIG 161
Query: 145 PLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKG 204
L DP VT+M VE+ P TY D+GG QI++++E VELP+ HPE + ++GI PPKG
Sbjct: 162 VLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKG 221
Query: 205 VLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACI 264
V+ YGPPGTGKTLLA+AVAN+T A F+RV+GSEL+QKY+G+G ++VRELF++A I
Sbjct: 222 VILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSI 281
Query: 265 VFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPAL 324
VF DE+DAIG R+D GG+ E+QRTMLE++NQLDGFD+RG++KV+MATNR +TLDPAL
Sbjct: 282 VFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPAL 341
Query: 325 LRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFE 364
+RPGR+DRK+EF LPD +++ +IF+IHT M D+ +
Sbjct: 342 IRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLD 381
>UNIPROTKB|P62333 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=NAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0030674 GO:GO:0016887
EMBL:CH471078 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 EMBL:D78275 EMBL:AF006305 EMBL:BT006843
EMBL:CR456709 EMBL:AK313670 EMBL:BC005390 IPI:IPI00926977
PIR:S71316 RefSeq:NP_002797.3 UniGene:Hs.156171
ProteinModelPortal:P62333 SMR:P62333 DIP:DIP-38150N IntAct:P62333
MINT:MINT-5001174 STRING:P62333 PhosphoSite:P62333 DMDM:51702772
REPRODUCTION-2DPAGE:IPI00021926 PaxDb:P62333 PeptideAtlas:P62333
PRIDE:P62333 DNASU:5706 Ensembl:ENST00000445930 GeneID:5706
KEGG:hsa:5706 UCSC:uc010tqx.2 GeneCards:GC14P053173
H-InvDB:HIX0011661 HGNC:HGNC:9553 HPA:HPA042823 MIM:602708
neXtProt:NX_P62333 PharmGKB:PA33898 InParanoid:P62333
PhylomeDB:P62333 GenomeRNAi:5706 NextBio:22170 Bgee:P62333
CleanEx:HS_PSMC6 Genevestigator:P62333 GermOnline:ENSG00000100519
Uniprot:P62333
Length = 389
Score = 719 (258.2 bits), Expect = 4.8e-71, P = 4.8e-71
Identities = 144/338 (42%), Positives = 213/338 (63%)
Query: 42 EKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCT-KIINP--- 97
+K ++D KK L KE D L + KQ + E L+ + +I+
Sbjct: 6 DKALQDYRKK---LLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLK 62
Query: 98 NSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMM 157
+ K+++ ++VVG ++ + ++ G RV +D I LP ++DP V M
Sbjct: 63 QLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNM 122
Query: 158 TVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTL 217
+ E+ +V+Y+++GG EQI ++REV+ELP+ +PE F ++GI PPKG L YGPPGTGKTL
Sbjct: 123 SHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTL 182
Query: 218 LARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGAR 277
LARAVA++ D F++V+ S +V KY+GE AR++RE+F AR + CI+F DE+DAIGG R
Sbjct: 183 LARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRR 242
Query: 278 FDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFG 337
F +G D E+QRT++E++NQ+DGFD +K++MATNRPDTLDPALLRPGRLDRK+
Sbjct: 243 FSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHID 302
Query: 338 LPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
LP+ ++R I KIH + +I +E + +L G
Sbjct: 303 LPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNG 340
>UNIPROTKB|F1SFE6 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064
TIGRFAMs:TIGR01242 CTD:5706 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:CU407115 RefSeq:XP_001928782.2 UniGene:Ssc.51323
Ensembl:ENSSSCT00000005554 GeneID:100154148 KEGG:ssc:100154148
ArrayExpress:F1SFE6 Uniprot:F1SFE6
Length = 403
Score = 719 (258.2 bits), Expect = 4.8e-71, P = 4.8e-71
Identities = 144/338 (42%), Positives = 213/338 (63%)
Query: 42 EKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCT-KIINP--- 97
+K ++D KK L KE D L + KQ + E L+ + +I+
Sbjct: 20 DKALQDYRKK---LLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLK 76
Query: 98 NSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMM 157
+ K+++ ++VVG ++ + ++ G RV +D I LP ++DP V M
Sbjct: 77 QLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNM 136
Query: 158 TVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTL 217
+ E+ +V+Y+++GG EQI ++REV+ELP+ +PE F ++GI PPKG L YGPPGTGKTL
Sbjct: 137 SHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTL 196
Query: 218 LARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGAR 277
LARAVA++ D F++V+ S +V KY+GE AR++RE+F AR + CI+F DE+DAIGG R
Sbjct: 197 LARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRR 256
Query: 278 FDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFG 337
F +G D E+QRT++E++NQ+DGFD +K++MATNRPDTLDPALLRPGRLDRK+
Sbjct: 257 FSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHID 316
Query: 338 LPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
LP+ ++R I KIH + +I +E + +L G
Sbjct: 317 LPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNG 354
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 719 (258.2 bits), Expect = 4.8e-71, P = 4.8e-71
Identities = 138/280 (49%), Positives = 197/280 (70%)
Query: 85 PLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQI 144
P+ V +II +D+ +++ ++ V + V +E G V ++ + +
Sbjct: 106 PMSVGTLEEII----DDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIG 161
Query: 145 PLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKG 204
L DP VT+M VE+ P TY D+GG QI++++E VELP+ HPE + ++GI PPKG
Sbjct: 162 VLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKG 221
Query: 205 VLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACI 264
V+ YGPPGTGKTLLA+AVAN+T A F+RV+GSEL+QKY+G+G ++VRELF++A I
Sbjct: 222 VILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSI 281
Query: 265 VFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPAL 324
VF DE+DAIG R+D GG+ E+QRTMLE++NQLDGFD+RG++KV+MATNR +TLDPAL
Sbjct: 282 VFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPAL 341
Query: 325 LRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFE 364
+RPGR+DRK+EF LPD +++ +IF+IHT M D+ +
Sbjct: 342 IRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLD 381
>UNIPROTKB|P62335 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:43179 "Spermophilus tridecemlineatus" [GO:0022624
"proteasome accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:U36395 PIR:JC5349 ProteinModelPortal:P62335
SMR:P62335 PRIDE:P62335 Ensembl:ENSSTOT00000014492 Uniprot:P62335
Length = 389
Score = 719 (258.2 bits), Expect = 4.8e-71, P = 4.8e-71
Identities = 144/338 (42%), Positives = 213/338 (63%)
Query: 42 EKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCT-KIINP--- 97
+K ++D KK L KE D L + KQ + E L+ + +I+
Sbjct: 6 DKALQDYRKK---LLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLK 62
Query: 98 NSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMM 157
+ K+++ ++VVG ++ + ++ G RV +D I LP ++DP V M
Sbjct: 63 QLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNM 122
Query: 158 TVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTL 217
+ E+ +V+Y+++GG EQI ++REV+ELP+ +PE F ++GI PPKG L YGPPGTGKTL
Sbjct: 123 SHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTL 182
Query: 218 LARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGAR 277
LARAVA++ D F++V+ S +V KY+GE AR++RE+F AR + CI+F DE+DAIGG R
Sbjct: 183 LARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRR 242
Query: 278 FDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFG 337
F +G D E+QRT++E++NQ+DGFD +K++MATNRPDTLDPALLRPGRLDRK+
Sbjct: 243 FSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHID 302
Query: 338 LPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
LP+ ++R I KIH + +I +E + +L G
Sbjct: 303 LPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNG 340
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 719 (258.2 bits), Expect = 4.8e-71, P = 4.8e-71
Identities = 138/280 (49%), Positives = 197/280 (70%)
Query: 85 PLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQI 144
P+ V +II +D+ +++ ++ V + V +E G V ++ + +
Sbjct: 106 PMSVGTLEEII----DDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIG 161
Query: 145 PLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKG 204
L DP VT+M VE+ P TY D+GG QI++++E VELP+ HPE + ++GI PPKG
Sbjct: 162 VLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKG 221
Query: 205 VLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACI 264
V+ YGPPGTGKTLLA+AVAN+T A F+RV+GSEL+QKY+G+G ++VRELF++A I
Sbjct: 222 VILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSI 281
Query: 265 VFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPAL 324
VF DE+DAIG R+D GG+ E+QRTMLE++NQLDGFD+RG++KV+MATNR +TLDPAL
Sbjct: 282 VFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPAL 341
Query: 325 LRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFE 364
+RPGR+DRK+EF LPD +++ +IF+IHT M D+ +
Sbjct: 342 IRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLD 381
>MGI|MGI:1914339 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914339
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 OMA:EHKEVES EMBL:AK012174 EMBL:AK014354
EMBL:AK144728 EMBL:AK166961 EMBL:BC043044 EMBL:BC057997
IPI:IPI00125971 RefSeq:NP_080235.2 UniGene:Mm.18472
ProteinModelPortal:P62334 SMR:P62334 IntAct:P62334 STRING:P62334
PhosphoSite:P62334 REPRODUCTION-2DPAGE:IPI00125971
REPRODUCTION-2DPAGE:P62334 PaxDb:P62334 PRIDE:P62334
Ensembl:ENSMUST00000022380 GeneID:67089 KEGG:mmu:67089
InParanoid:P62334 NextBio:323546 Bgee:P62334 Genevestigator:P62334
GermOnline:ENSMUSG00000021832 Uniprot:P62334
Length = 389
Score = 719 (258.2 bits), Expect = 4.8e-71, P = 4.8e-71
Identities = 144/338 (42%), Positives = 213/338 (63%)
Query: 42 EKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCT-KIINP--- 97
+K ++D KK L KE D L + KQ + E L+ + +I+
Sbjct: 6 DKALQDYRKK---LLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLK 62
Query: 98 NSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMM 157
+ K+++ ++VVG ++ + ++ G RV +D I LP ++DP V M
Sbjct: 63 QLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNM 122
Query: 158 TVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTL 217
+ E+ +V+Y+++GG EQI ++REV+ELP+ +PE F ++GI PPKG L YGPPGTGKTL
Sbjct: 123 SHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTL 182
Query: 218 LARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGAR 277
LARAVA++ D F++V+ S +V KY+GE AR++RE+F AR + CI+F DE+DAIGG R
Sbjct: 183 LARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRR 242
Query: 278 FDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFG 337
F +G D E+QRT++E++NQ+DGFD +K++MATNRPDTLDPALLRPGRLDRK+
Sbjct: 243 FSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHID 302
Query: 338 LPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
LP+ ++R I KIH + +I +E + +L G
Sbjct: 303 LPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNG 340
>RGD|2318218 [details] [associations]
symbol:LOC100365869 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:2318218
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:CH474040 KO:K03064 TIGRFAMs:TIGR01242 CTD:5706
GeneTree:ENSGT00550000074826 RefSeq:NP_001093979.1
UniGene:Rn.103233 Ensembl:ENSRNOT00000009649 GeneID:289990
KEGG:rno:289990 NextBio:630545 Uniprot:G3V6W6
Length = 403
Score = 719 (258.2 bits), Expect = 4.8e-71, P = 4.8e-71
Identities = 144/338 (42%), Positives = 213/338 (63%)
Query: 42 EKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCT-KIINP--- 97
+K ++D KK L KE D L + KQ + E L+ + +I+
Sbjct: 20 DKALQDYRKK---LLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLK 76
Query: 98 NSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMM 157
+ K+++ ++VVG ++ + ++ G RV +D I LP ++DP V M
Sbjct: 77 QLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNM 136
Query: 158 TVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTL 217
+ E+ +V+Y+++GG EQI ++REV+ELP+ +PE F ++GI PPKG L YGPPGTGKTL
Sbjct: 137 SHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTL 196
Query: 218 LARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGAR 277
LARAVA++ D F++V+ S +V KY+GE AR++RE+F AR + CI+F DE+DAIGG R
Sbjct: 197 LARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRR 256
Query: 278 FDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFG 337
F +G D E+QRT++E++NQ+DGFD +K++MATNRPDTLDPALLRPGRLDRK+
Sbjct: 257 FSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHID 316
Query: 338 LPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
LP+ ++R I KIH + +I +E + +L G
Sbjct: 317 LPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNG 354
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 719 (258.2 bits), Expect = 4.8e-71, P = 4.8e-71
Identities = 138/280 (49%), Positives = 197/280 (70%)
Query: 85 PLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQI 144
P+ V +II +D+ +++ ++ V + V +E G V ++ + +
Sbjct: 106 PMSVGTLEEII----DDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIG 161
Query: 145 PLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKG 204
L DP VT+M VE+ P TY D+GG QI++++E VELP+ HPE + ++GI PPKG
Sbjct: 162 VLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKG 221
Query: 205 VLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACI 264
V+ YGPPGTGKTLLA+AVAN+T A F+RV+GSEL+QKY+G+G ++VRELF++A I
Sbjct: 222 VILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSI 281
Query: 265 VFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPAL 324
VF DE+DAIG R+D GG+ E+QRTMLE++NQLDGFD+RG++KV+MATNR +TLDPAL
Sbjct: 282 VFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPAL 341
Query: 325 LRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFE 364
+RPGR+DRK+EF LPD +++ +IF+IHT M D+ +
Sbjct: 342 IRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLD 381
>UNIPROTKB|Q90732 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 EMBL:U60187
IPI:IPI00585304 PIR:S74197 RefSeq:NP_990289.1 UniGene:Gga.1071
ProteinModelPortal:Q90732 STRING:Q90732 PRIDE:Q90732 GeneID:395804
KEGG:gga:395804 CTD:5700 InParanoid:Q90732 OrthoDB:EOG4D7Z5Q
NextBio:20815872 Uniprot:Q90732
Length = 440
Score = 716 (257.1 bits), Expect = 9.9e-71, P = 9.9e-71
Identities = 138/282 (48%), Positives = 198/282 (70%)
Query: 85 PLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQI 144
P+ V +II +D+ +++ ++ V + V +E G V ++ + +
Sbjct: 106 PMSVGTLEEII----DDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIG 161
Query: 145 PLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKG 204
L DP VT+M +E+ P TY D+GG QI++++E VELP+ HPE + ++GI PPKG
Sbjct: 162 VLMDDTDPLVTVMKLEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKG 221
Query: 205 VLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACI 264
V+ YGPPGTGKTLLA+AVAN+T A F+RV+GSEL+QKY+G+G ++VRELF++A I
Sbjct: 222 VILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPSI 281
Query: 265 VFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPAL 324
VF DE+DAIG R+D GG+ E+QRTMLE++NQLDGFD+RG++KV+MATNR +TLDPAL
Sbjct: 282 VFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPAL 341
Query: 325 LRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELL 366
+RPGR+DRK+EF LPD +++ +IF+IHT M D+ + L
Sbjct: 342 IRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDEL 383
>RGD|1308825 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0022624 "proteasome accessory
complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1308825 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 RefSeq:NP_001093979.1 UniGene:Rn.103233
GeneID:289990 KEGG:rno:289990 NextBio:630545 EMBL:BC107950
IPI:IPI00362105 ProteinModelPortal:Q32PW9 IntAct:Q32PW9
STRING:Q32PW9 PhosphoSite:Q32PW9 PRIDE:Q32PW9 UCSC:RGD:1308825
InParanoid:Q32PW9 ArrayExpress:Q32PW9 Genevestigator:Q32PW9
Uniprot:Q32PW9
Length = 381
Score = 716 (257.1 bits), Expect = 9.9e-71, P = 9.9e-71
Identities = 130/275 (47%), Positives = 190/275 (69%)
Query: 101 DSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVE 160
+ K+++ ++VVG ++ + ++ G RV +D I LP ++DP V M+ E
Sbjct: 58 EEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHE 117
Query: 161 EKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLAR 220
+ +V+Y+++GG EQI ++REV+ELP+ +PE F ++GI PPKG L YGPPGTGKTLLAR
Sbjct: 118 DPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLAR 177
Query: 221 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDD 280
AVA++ D F++V+ S +V KY+GE AR++RE+F AR + CI+F DE+DAIGG RF +
Sbjct: 178 AVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSE 237
Query: 281 GVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPD 340
G D E+QRT++E++NQ+DGFD +K++MATNRPDTLDPALLRPGRLDRK+ LP+
Sbjct: 238 GTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPN 297
Query: 341 LESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
++R I KIH + +I +E + +L G
Sbjct: 298 EQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNG 332
>WB|WBGene00004502 [details] [associations]
symbol:rpt-2 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0000003 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER EMBL:FO080494 PIR:T31800
RefSeq:NP_504558.1 ProteinModelPortal:O16368 SMR:O16368
IntAct:O16368 MINT:MINT-210699 STRING:O16368 PaxDb:O16368
PRIDE:O16368 EnsemblMetazoa:F29G9.5.1 EnsemblMetazoa:F29G9.5.2
GeneID:178988 KEGG:cel:CELE_F29G9.5 UCSC:F29G9.5 CTD:178988
WormBase:F29G9.5 GeneTree:ENSGT00550000074818 InParanoid:O16368
NextBio:903424 Uniprot:O16368
Length = 443
Score = 716 (257.1 bits), Expect = 9.9e-71, P = 9.9e-71
Identities = 135/280 (48%), Positives = 197/280 (70%)
Query: 85 PLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQI 144
P+ V +II +D +++ ++ V + V +E G V ++ + +
Sbjct: 109 PMAVGSLEEII----DDQHAIVSTNVGSEHYVNIMSFVDKEQLEPGCSVLLNHKNHAVIG 164
Query: 145 PLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKG 204
L DP V++M +E+ P TY DVGG +QI++++E VELP+ HPE + ++GI PPKG
Sbjct: 165 VLSDDTDPMVSVMKLEKAPQETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKG 224
Query: 205 VLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACI 264
V+ YG PGTGKTLLA+AVAN+T A F+R++GSEL+QKY+G+G +MVRELF++A I
Sbjct: 225 VILYGCPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSI 284
Query: 265 VFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPAL 324
VF DE+DA+G R+D GG+ E+QRTMLE++NQLDGFD+RG++KVLMATNR ++LDPAL
Sbjct: 285 VFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVLMATNRIESLDPAL 344
Query: 325 LRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFE 364
+RPGR+DRK+EF LPD +++ +IF+IHT M +++ E
Sbjct: 345 IRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTLGKEVNLE 384
>TAIR|locus:2161258 [details] [associations]
symbol:RPT3 "regulatory particle triple-A ATPase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IGI;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=RCA;TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009735 "response to cytokinin
stimulus" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0010498 "proteasomal protein catabolic process"
evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
GO:GO:0016020 EMBL:AB019228 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:AF123392 EMBL:AY070466 EMBL:BT020373
IPI:IPI00537564 RefSeq:NP_200637.1 UniGene:At.45955
ProteinModelPortal:Q9SEI4 SMR:Q9SEI4 IntAct:Q9SEI4 STRING:Q9SEI4
PaxDb:Q9SEI4 PRIDE:Q9SEI4 EnsemblPlants:AT5G58290.1 GeneID:835941
KEGG:ath:AT5G58290 GeneFarm:1500 TAIR:At5g58290 InParanoid:Q9SEI4
KO:K03063 OMA:DQTTNVK ProtClustDB:CLSN2686094 Genevestigator:Q9SEI4
GermOnline:AT5G58290 Uniprot:Q9SEI4
Length = 408
Score = 715 (256.8 bits), Expect = 1.3e-70, P = 1.3e-70
Identities = 135/280 (48%), Positives = 194/280 (69%)
Query: 85 PLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQI 144
PL + + ++++ N+ ++ + + V + ++ ++ V + R+ +
Sbjct: 76 PLVIGQFMEMVDQNNG----IVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVD 131
Query: 145 PLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKG 204
LPP+ D S+++++ EKPDV+YND+GGC Q +++RE VELP+ H E + ++GIDPP+G
Sbjct: 132 VLPPEADSSISLLSQSEKPDVSYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRG 191
Query: 205 VLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACI 264
VL YGPPGTGKT+LA+AVAN T A FIRV+GSE VQKY+GEG RMVR++F++A+ I
Sbjct: 192 VLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAI 251
Query: 265 VFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPAL 324
+F DEVDAI ARFD G D EVQR ++E++NQ+DGFD N+KV+MATNR DTLDPAL
Sbjct: 252 IFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPAL 311
Query: 325 LRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFE 364
LRPGRLDRK+EF LPD + +F++ T MN ++ E
Sbjct: 312 LRPGRLDRKIEFPLPDRRQKRLVFQVCTSKMNLSDEVDLE 351
>TAIR|locus:2036099 [details] [associations]
symbol:RPT5B "26S proteasome AAA-ATPase subunit RPT5B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0010255 "glucose mediated signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009553 "embryo sac
development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009555
GO:GO:0000502 GO:GO:0017111 GO:GO:0009553 EMBL:AC000106
GO:GO:0010498 GO:GO:0010255 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 ProtClustDB:CLSN2679225
EMBL:EU980096 EMBL:AY050423 EMBL:AF412095 EMBL:AY124813
IPI:IPI00549144 PIR:C86223 RefSeq:NP_172384.1 UniGene:At.10379
UniGene:At.42241 ProteinModelPortal:O04019 SMR:O04019 IntAct:O04019
STRING:O04019 PaxDb:O04019 PRIDE:O04019 EnsemblPlants:AT1G09100.1
GeneID:837431 KEGG:ath:AT1G09100 GeneFarm:1498 TAIR:At1g09100
InParanoid:O04019 OMA:VEILEMS PhylomeDB:O04019
Genevestigator:O04019 Uniprot:O04019
Length = 423
Score = 714 (256.4 bits), Expect = 1.6e-70, P = 1.6e-70
Identities = 140/261 (53%), Positives = 185/261 (70%)
Query: 115 VVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCK 174
VVGL V P ++ G VGV+++ Y I LP + D V M V+EKP YND+GG +
Sbjct: 120 VVGL---VDPDTLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLE 176
Query: 175 EQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVI 234
+QI+++ E + LPM H E+F KLGI PPKGVL YGPPGTGKTL+ARA A +T+A F+++
Sbjct: 177 KQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLA 236
Query: 235 GSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLE 294
G +LVQ ++G+GA++VR+ F +A+ K CI+F DE+DAIG RFD V GD EVQRTMLE
Sbjct: 237 GPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLE 296
Query: 295 IVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRT 354
++NQLDGF + IKV+ ATNR D LDPAL+R GRLDRK+EF P E+R +I +IH+R
Sbjct: 297 LLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARGRILQIHSRK 356
Query: 355 MNCERDIRFELLSRLCPNSTG 375
MN D+ FE L+R + G
Sbjct: 357 MNVNADVNFEELARSTDDFNG 377
>ZFIN|ZDB-GENE-040625-69 [details] [associations]
symbol:psmc1b "proteasome (prosome, macropain) 26S
subunit, ATPase, 1b" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040625-69 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03062 GeneTree:ENSGT00550000074818 EMBL:AL935145 EMBL:BC071538
IPI:IPI00495318 RefSeq:NP_001002091.1 UniGene:Dr.1187 STRING:Q6IQ72
Ensembl:ENSDART00000063950 GeneID:415181 KEGG:dre:415181 CTD:415181
InParanoid:Q6IQ72 NextBio:20818851 Uniprot:Q6IQ72
Length = 440
Score = 713 (256.0 bits), Expect = 2.1e-70, P = 2.1e-70
Identities = 137/280 (48%), Positives = 196/280 (70%)
Query: 85 PLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQI 144
P+ V +II +D+ +++ ++ V + V +E G V ++ + +
Sbjct: 106 PMSVGTLEEII----DDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIG 161
Query: 145 PLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKG 204
L DP VT+M VE+ P TY D+GG QI++++E VELP+ HPE + ++GI PPKG
Sbjct: 162 VLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKG 221
Query: 205 VLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACI 264
V+ YG PGTGKTLLA+AVAN+T A F+RV+GSEL+QKY+G+G ++VRELF++A I
Sbjct: 222 VILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSI 281
Query: 265 VFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPAL 324
VF DE+DAIG R+D GG+ E+QRTMLE++NQLDGFD+RG++KV+MATNR +TLDPAL
Sbjct: 282 VFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPAL 341
Query: 325 LRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFE 364
+RPGR+DRK+EF LPD +++ +IF+IHT M D+ +
Sbjct: 342 IRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTVAEDVSLD 381
>TAIR|locus:2061639 [details] [associations]
symbol:RPT2b "regulatory particle AAA-ATPase 2b"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007292
"female gamete generation" evidence=IGI] [GO:0010078 "maintenance
of root meristem identity" evidence=IMP] [GO:0048232 "male gamete
generation" evidence=IGI] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC006081 GO:GO:0007292
GO:GO:0010078 HSSP:P43773 GO:GO:0048232 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 UniGene:At.24596 KO:K03062
ProtClustDB:CLSN2683303 EMBL:AF372977 EMBL:AY035072 EMBL:AY056335
EMBL:AY087584 IPI:IPI00521093 PIR:E84585 RefSeq:NP_179604.1
UniGene:At.13496 ProteinModelPortal:Q9SL67 SMR:Q9SL67 IntAct:Q9SL67
STRING:Q9SL67 PaxDb:Q9SL67 PRIDE:Q9SL67 EnsemblPlants:AT2G20140.1
GeneID:816533 KEGG:ath:AT2G20140 GeneFarm:1495 TAIR:At2g20140
InParanoid:Q9SL67 OMA:FIRNQER PhylomeDB:Q9SL67 Uniprot:Q9SL67
Length = 443
Score = 712 (255.7 bits), Expect = 2.6e-70, P = 2.6e-70
Identities = 134/280 (47%), Positives = 196/280 (70%)
Query: 85 PLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQI 144
P+ V ++I+ N +++ ++ VG+ V +E G + + +
Sbjct: 109 PMSVGNLEELIDENHA----IVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVG 164
Query: 145 PLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKG 204
L ++DP V++M VE+ P +Y D+GG + QI++++E VELP+ HPE + +GI PPKG
Sbjct: 165 ILQDEVDPMVSVMKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKG 224
Query: 205 VLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACI 264
V+ YG PGTGKTLLA+AVAN T A F+RV+GSEL+QKY+G+G ++VRELF++A I
Sbjct: 225 VILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSI 284
Query: 265 VFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPAL 324
VF DE+DA+G R+D GG+ E+QRTMLE++NQLDGFD+RG++KV++ATNR ++LDPAL
Sbjct: 285 VFIDEIDAVGTKRYDANSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPAL 344
Query: 325 LRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFE 364
LRPGR+DRK+EF LPD+++R +IF+IHT M D+ E
Sbjct: 345 LRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLAEDVNLE 384
>GENEDB_PFALCIPARUM|PF13_0033 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853
GO:GO:0017111 EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 OMA:EHKEVES ProtClustDB:CLSZ2429012
GO:GO:0005838 RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1
PRIDE:Q8IEQ1 EnsemblProtists:PF13_0033:mRNA GeneID:814012
KEGG:pfa:PF13_0033 EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 711 (255.3 bits), Expect = 3.3e-70, P = 3.3e-70
Identities = 135/282 (47%), Positives = 190/282 (67%)
Query: 100 EDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSV-TMMT 158
ED K+++ ++VVG K++ + + G RV +D + LP ++DP V M++
Sbjct: 63 EDEKFIVKASSGPRYVVGCKSKINKSKLVIGTRVSLDMTTLTVMKRLPCEVDPLVFNMIS 122
Query: 159 VEEKPD-----VTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGT 213
+K + V YN +GG EQI +MREVVELP+L+P + ++GI PKGVL YGPPGT
Sbjct: 123 DIDKSENSTNKVNYNQIGGLSEQIRQMREVVELPILNPYLYKRVGIKTPKGVLLYGPPGT 182
Query: 214 GKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAI 273
GKTLLARA+A+ + F+R++ S +V KY+GE AR++RE+F A+ + CI+F DE+DAI
Sbjct: 183 GKTLLARAMASNINCNFMRIVVSAIVDKYIGESARIIREMFNYAKEHQPCIIFMDEIDAI 242
Query: 274 GGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRK 333
GG RF G D E+QRT++E++N LDGF+ GN+K++MATNRPD LDPAL+RPGRLDRK
Sbjct: 243 GGRRFSQGTSADREIQRTLMELLNHLDGFEELGNVKIIMATNRPDVLDPALVRPGRLDRK 302
Query: 334 VEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
+E LP+ +R +I KIH M DI +E + RLC G
Sbjct: 303 IEIPLPNETARIEILKIHANKMTKLGDIDYESVCRLCDGFNG 344
>UNIPROTKB|Q8IEQ1 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
OMA:EHKEVES ProtClustDB:CLSZ2429012 GO:GO:0005838
RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1 PRIDE:Q8IEQ1
EnsemblProtists:PF13_0033:mRNA GeneID:814012 KEGG:pfa:PF13_0033
EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 711 (255.3 bits), Expect = 3.3e-70, P = 3.3e-70
Identities = 135/282 (47%), Positives = 190/282 (67%)
Query: 100 EDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSV-TMMT 158
ED K+++ ++VVG K++ + + G RV +D + LP ++DP V M++
Sbjct: 63 EDEKFIVKASSGPRYVVGCKSKINKSKLVIGTRVSLDMTTLTVMKRLPCEVDPLVFNMIS 122
Query: 159 VEEKPD-----VTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGT 213
+K + V YN +GG EQI +MREVVELP+L+P + ++GI PKGVL YGPPGT
Sbjct: 123 DIDKSENSTNKVNYNQIGGLSEQIRQMREVVELPILNPYLYKRVGIKTPKGVLLYGPPGT 182
Query: 214 GKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAI 273
GKTLLARA+A+ + F+R++ S +V KY+GE AR++RE+F A+ + CI+F DE+DAI
Sbjct: 183 GKTLLARAMASNINCNFMRIVVSAIVDKYIGESARIIREMFNYAKEHQPCIIFMDEIDAI 242
Query: 274 GGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRK 333
GG RF G D E+QRT++E++N LDGF+ GN+K++MATNRPD LDPAL+RPGRLDRK
Sbjct: 243 GGRRFSQGTSADREIQRTLMELLNHLDGFEELGNVKIIMATNRPDVLDPALVRPGRLDRK 302
Query: 334 VEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
+E LP+ +R +I KIH M DI +E + RLC G
Sbjct: 303 IEIPLPNETARIEILKIHANKMTKLGDIDYESVCRLCDGFNG 344
>TAIR|locus:2119926 [details] [associations]
symbol:RPT2a "regulatory particle AAA-ATPase 2A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0009933 "meristem structural organization" evidence=IMP]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0010015 "root
morphogenesis" evidence=IMP] [GO:0010078 "maintenance of root
meristem identity" evidence=IMP] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0035266 "meristem growth"
evidence=IMP] [GO:0048367 "shoot system development" evidence=IMP]
[GO:0048827 "phyllome development" evidence=IMP] [GO:0048829 "root
cap development" evidence=IMP] [GO:0046686 "response to cadmium
ion" evidence=IEP;RCA] [GO:0016020 "membrane" evidence=IDA]
[GO:0009408 "response to heat" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA;IMP] [GO:0043248 "proteasome assembly"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0051788 "response to misfolded protein" evidence=RCA;IMP]
[GO:0080129 "proteasome core complex assembly" evidence=RCA;IMP]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0007292 "female gamete generation"
evidence=IGI] [GO:0048232 "male gamete generation" evidence=IGI]
[GO:0090351 "seedling development" evidence=IMP] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0009651
"response to salt stress" evidence=RCA] [GO:0009853
"photorespiration" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0051510 "regulation of
unidimensional cell growth" evidence=RCA] [GO:0060968 "regulation
of gene silencing" evidence=IMP] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046686 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043161 GO:GO:0016020 EMBL:AL078470
EMBL:AL161574 GO:GO:0009408 GO:GO:0010311 GO:GO:0048829
GO:GO:0000502 GO:GO:0043248 GO:GO:0017111 GO:GO:0009965
GO:GO:0009933 EMBL:AL078469 GO:GO:0007292 GO:GO:0060968
GO:GO:0010078 HSSP:P43773 GO:GO:0051788 GO:GO:0090351 GO:GO:0048232
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123391 EMBL:AB161192 EMBL:AY034975 IPI:IPI00538666
PIR:T08959 RefSeq:NP_194633.1 UniGene:At.24596
ProteinModelPortal:Q9SZD4 SMR:Q9SZD4 IntAct:Q9SZD4 STRING:Q9SZD4
PaxDb:Q9SZD4 PRIDE:Q9SZD4 EnsemblPlants:AT4G29040.1 GeneID:829025
KEGG:ath:AT4G29040 GeneFarm:1494 TAIR:At4g29040 InParanoid:Q9SZD4
KO:K03062 OMA:SAIVMEA PhylomeDB:Q9SZD4 ProtClustDB:CLSN2683303
GO:GO:0035266 Uniprot:Q9SZD4
Length = 443
Score = 711 (255.3 bits), Expect = 3.3e-70, P = 3.3e-70
Identities = 134/280 (47%), Positives = 196/280 (70%)
Query: 85 PLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQI 144
P+ V ++I+ N +++ ++ VG+ V +E G + + +
Sbjct: 109 PMSVGNLEELIDENHA----IVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVG 164
Query: 145 PLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKG 204
L ++DP V++M VE+ P +Y D+GG + QI++++E VELP+ HPE + +GI PPKG
Sbjct: 165 ILQDEVDPMVSVMKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKG 224
Query: 205 VLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACI 264
V+ YG PGTGKTLLA+AVAN T A F+RV+GSEL+QKY+G+G ++VRELF++A I
Sbjct: 225 VILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSI 284
Query: 265 VFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPAL 324
VF DE+DA+G R+D GG+ E+QRTMLE++NQLDGFD+RG++KV++ATNR ++LDPAL
Sbjct: 285 VFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPAL 344
Query: 325 LRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFE 364
LRPGR+DRK+EF LPD+++R +IF+IHT M D+ E
Sbjct: 345 LRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLSEDVNLE 384
>GENEDB_PFALCIPARUM|PF11_0314 [details] [associations]
symbol:PF11_0314 "26S protease subunit
regulatory subunit 6a, putative" species:5833 "Plasmodium
falciparum" [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
EMBL:AE014186 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 709 (254.6 bits), Expect = 5.5e-70, P = 5.5e-70
Identities = 136/254 (53%), Positives = 182/254 (71%)
Query: 122 VSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMR 181
+ ++++ G VGV+++ Y I LP + D V M V EKP Y+D+GG +QIE +
Sbjct: 140 IDASELKPGDLVGVNKDSYLIIDKLPQEYDNRVKAMEVIEKPSEDYSDIGGLDKQIEDLV 199
Query: 182 EVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQK 241
E + LPMLH EKF K+GI PPKGVL +GPPGTGKTLLARA A++T+A F+++ G +LVQ
Sbjct: 200 EAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLLARACASQTNATFLKLAGPQLVQM 259
Query: 242 YVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDG 301
++G+GA+MVR+ F +A+ K I+F DE+DAIG RFD + GD EVQRTMLE++NQLDG
Sbjct: 260 FIGDGAKMVRDAFNLAKEKAPAIIFIDELDAIGTKRFDSELSGDREVQRTMLELLNQLDG 319
Query: 302 FDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDI 361
F +KV+ ATNRPDTLDPALLR GRLDRK+E P+ ESR +I +IH+R MN +D+
Sbjct: 320 FSTDDTVKVIAATNRPDTLDPALLRSGRLDRKIELPHPNEESRARILQIHSRKMNVHKDV 379
Query: 362 RFELLSRLCPNSTG 375
FE L+R + G
Sbjct: 380 NFEELARSTDDFNG 393
>UNIPROTKB|Q8II60 [details] [associations]
symbol:PF11_0314 "26S protease subunit regulatory subunit
6a, putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 EMBL:AE014186
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 709 (254.6 bits), Expect = 5.5e-70, P = 5.5e-70
Identities = 136/254 (53%), Positives = 182/254 (71%)
Query: 122 VSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMR 181
+ ++++ G VGV+++ Y I LP + D V M V EKP Y+D+GG +QIE +
Sbjct: 140 IDASELKPGDLVGVNKDSYLIIDKLPQEYDNRVKAMEVIEKPSEDYSDIGGLDKQIEDLV 199
Query: 182 EVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQK 241
E + LPMLH EKF K+GI PPKGVL +GPPGTGKTLLARA A++T+A F+++ G +LVQ
Sbjct: 200 EAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLLARACASQTNATFLKLAGPQLVQM 259
Query: 242 YVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDG 301
++G+GA+MVR+ F +A+ K I+F DE+DAIG RFD + GD EVQRTMLE++NQLDG
Sbjct: 260 FIGDGAKMVRDAFNLAKEKAPAIIFIDELDAIGTKRFDSELSGDREVQRTMLELLNQLDG 319
Query: 302 FDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDI 361
F +KV+ ATNRPDTLDPALLR GRLDRK+E P+ ESR +I +IH+R MN +D+
Sbjct: 320 FSTDDTVKVIAATNRPDTLDPALLRSGRLDRKIELPHPNEESRARILQIHSRKMNVHKDV 379
Query: 362 RFELLSRLCPNSTG 375
FE L+R + G
Sbjct: 380 NFEELARSTDDFNG 393
>SGD|S000005785 [details] [associations]
symbol:RPT4 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IMP] [GO:0030433 "ER-associated protein
catabolic process" evidence=IMP] [GO:0032968 "positive regulation
of transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0019904 "protein domain specific binding"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000005785 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0019904 EMBL:BK006948 GO:GO:0016887
GO:GO:0030433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
RefSeq:NP_014902.3 GeneID:854433 KEGG:sce:YOR259C KO:K03064
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GeneTree:ENSGT00550000074826 OMA:EHKEVES
GO:GO:0008540 OrthoDB:EOG40KC79 EMBL:U43720 EMBL:U93262 EMBL:Z75167
PIR:S67156 RefSeq:NP_014904.3 PDB:4B4T PDBsum:4B4T
ProteinModelPortal:P53549 SMR:P53549 DIP:DIP-1589N IntAct:P53549
MINT:MINT-397407 STRING:P53549 PaxDb:P53549 PeptideAtlas:P53549
EnsemblFungi:YOR259C GeneID:854435 KEGG:sce:YOR261C KO:K03038
NextBio:976664 Genevestigator:P53549 GermOnline:YOR259C
Uniprot:P53549
Length = 437
Score = 704 (252.9 bits), Expect = 1.8e-69, P = 1.8e-69
Identities = 138/291 (47%), Positives = 195/291 (67%)
Query: 93 KIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDP 152
+++ SE+ KY++ +++VG+ + V + +++G+RV +D I LP + DP
Sbjct: 107 EVMKELSEE-KYIVKASSGPRYIVGVRNSVDRSKLKKGVRVTLDITTLTIMRILPRETDP 165
Query: 153 SVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPG 212
V MT E+ ++T++ +GG EQI ++REV+ELP+ +PE F ++GI PPKGVL YGPPG
Sbjct: 166 LVYNMTSFEQGEITFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPG 225
Query: 213 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDA 272
TGKTLLA+AVA A FI S +V KY+GE AR++RE+F A+ + CI+F DEVDA
Sbjct: 226 TGKTLLAKAVAATIGANFIFSPASGIVDKYIGESARIIREMFAYAKEHEPCIIFMDEVDA 285
Query: 273 IGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDR 332
IGG RF +G D E+QRT++E++ Q+DGFD G K++MATNRPDTLDPALLRPGRLDR
Sbjct: 286 IGGRRFSEGTSADREIQRTLMELLTQMDGFDNLGQTKIIMATNRPDTLDPALLRPGRLDR 345
Query: 333 KVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTGKHSPFRSC 383
KVE LP+ R +IFKIHT + + FE ++ G + R+C
Sbjct: 346 KVEIPLPNEAGRLEIFKIHTAKVKKTGEFDFEAAVKMSDGFNG--ADIRNC 394
>DICTYBASE|DDB_G0284415 [details] [associations]
symbol:psmC3 "26S proteasome ATPase 3 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284415 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GenomeReviews:CM000153_GR GO:GO:0030163 GO:GO:0000502
HSSP:Q01853 GO:GO:0017111 EMBL:AAFI02000064 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
RefSeq:XP_638617.1 ProteinModelPortal:Q54PN7 STRING:Q54PN7
PRIDE:Q54PN7 EnsemblProtists:DDB0232967 GeneID:8624588
KEGG:ddi:DDB_G0284415 InParanoid:Q54PN7 OMA:GALMYGP
ProtClustDB:CLSZ2433711 Uniprot:Q54PN7
Length = 421
Score = 703 (252.5 bits), Expect = 2.4e-69, P = 2.4e-69
Identities = 145/307 (47%), Positives = 202/307 (65%)
Query: 75 SDKQMMQEEQPLQVARCTKIINP----NSEDSKYVINVKQIAKFVVGLGDK--VSPTDIE 128
+DK + + P VA +II+ ++ SK V+ VK + + L V +
Sbjct: 70 NDKLQVNTQLPHLVANVVEIIDMVLDGETQPSKCVV-VKASTRQTIFLAYPGIVDVDKLR 128
Query: 129 EGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPM 188
G VG++++ Y I LPP+ D V M ++EKP Y+D+GG +QI+++ E V LPM
Sbjct: 129 PGDLVGINKDSYIILDTLPPEYDSRVKAMEIDEKPTEEYSDIGGLDKQIQELVEAVVLPM 188
Query: 189 LHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGAR 248
H E+F +GI PPKGVL YGPPGTGKTLLARA A +T++ ++++ G +LVQ ++G+GA+
Sbjct: 189 THKERFESIGIKPPKGVLMYGPPGTGKTLLARACAAQTNSTYLKLAGPQLVQMFIGDGAK 248
Query: 249 MVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNI 308
+VR+ F +A+ K I+F DE+DAIG RFD V GD EVQRTMLE++NQLDGF + NI
Sbjct: 249 LVRDAFALAKEKGPTIIFIDELDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDANI 308
Query: 309 KVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSR 368
KV+ ATNR D LDPALLR GRLDRK+EF LP+ E+R I +IH+R MN D+ F+ L+R
Sbjct: 309 KVIAATNRIDILDPALLRSGRLDRKIEFPLPNEEARAHILQIHSRKMNVSADVNFDELAR 368
Query: 369 LCPNSTG 375
+ G
Sbjct: 369 SSEDFNG 375
>WB|WBGene00004505 [details] [associations]
symbol:rpt-5 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:FO080337
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371
SMR:O76371 IntAct:O76371 MINT:MINT-211164 STRING:O76371
PaxDb:O76371 EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2
GeneID:172238 KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238
WormBase:F56H1.4 InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 700 (251.5 bits), Expect = 4.9e-69, P = 4.9e-69
Identities = 135/261 (51%), Positives = 185/261 (70%)
Query: 115 VVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCK 174
VVGL V P +++ G VGV+++ Y I LP + D V M V+E+P Y+D+GGC
Sbjct: 127 VVGL---VDPDELKPGDLVGVNKDSYLILEKLPAEYDSRVKAMEVDERPTEQYSDIGGCD 183
Query: 175 EQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVI 234
+QI+++ E V LPM H ++FV LGI PPKGVL YGPPGTGKT++ARAVA +T + F+++
Sbjct: 184 KQIQELIEAVVLPMTHKDRFVNLGIHPPKGVLMYGPPGTGKTMMARAVAAQTKSTFLKLA 243
Query: 235 GSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLE 294
G +LVQ ++G+GA++VR+ F +A+ K I+F DE+DAIG RFD GD EVQRTMLE
Sbjct: 244 GPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLE 303
Query: 295 IVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRT 354
++NQLDGF +IKV+ ATNR D LDPALLR GRLDRK+E P+ ++R +I +IH+R
Sbjct: 304 LLNQLDGFQPNDDIKVIAATNRIDVLDPALLRSGRLDRKIELPHPNEDARARIMQIHSRK 363
Query: 355 MNCERDIRFELLSRLCPNSTG 375
MN +D+ FE L+R + G
Sbjct: 364 MNVNKDVNFEELARCTDDFNG 384
>UNIPROTKB|O76371 [details] [associations]
symbol:rpt-5 "Protein RPT-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
GeneTree:ENSGT00560000077230 EMBL:FO080337 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371 SMR:O76371
IntAct:O76371 MINT:MINT-211164 STRING:O76371 PaxDb:O76371
EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2 GeneID:172238
KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238 WormBase:F56H1.4
InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 700 (251.5 bits), Expect = 4.9e-69, P = 4.9e-69
Identities = 135/261 (51%), Positives = 185/261 (70%)
Query: 115 VVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCK 174
VVGL V P +++ G VGV+++ Y I LP + D V M V+E+P Y+D+GGC
Sbjct: 127 VVGL---VDPDELKPGDLVGVNKDSYLILEKLPAEYDSRVKAMEVDERPTEQYSDIGGCD 183
Query: 175 EQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVI 234
+QI+++ E V LPM H ++FV LGI PPKGVL YGPPGTGKT++ARAVA +T + F+++
Sbjct: 184 KQIQELIEAVVLPMTHKDRFVNLGIHPPKGVLMYGPPGTGKTMMARAVAAQTKSTFLKLA 243
Query: 235 GSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLE 294
G +LVQ ++G+GA++VR+ F +A+ K I+F DE+DAIG RFD GD EVQRTMLE
Sbjct: 244 GPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLE 303
Query: 295 IVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRT 354
++NQLDGF +IKV+ ATNR D LDPALLR GRLDRK+E P+ ++R +I +IH+R
Sbjct: 304 LLNQLDGFQPNDDIKVIAATNRIDVLDPALLRSGRLDRKIELPHPNEDARARIMQIHSRK 363
Query: 355 MNCERDIRFELLSRLCPNSTG 375
MN +D+ FE L+R + G
Sbjct: 364 MNVNKDVNFEELARCTDDFNG 384
>SGD|S000002165 [details] [associations]
symbol:RPT2 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=IDA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IMP] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=IDA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IDA] [GO:0043171 "peptide
catabolic process" evidence=IMP] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002165 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0016887 GO:GO:0043171 GO:GO:0006511
GO:GO:0045732 EMBL:Z48432 GO:GO:0070682 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T
PDBsum:4B4T KO:K03062 OMA:FIRNQER GeneTree:ENSGT00550000074818
OrthoDB:EOG4FN7S6 EMBL:X81070 EMBL:L17040 EMBL:Z74055 PIR:S46613
RefSeq:NP_010277.1 ProteinModelPortal:P40327 SMR:P40327
DIP:DIP-6282N IntAct:P40327 MINT:MINT-632695 STRING:P40327
PaxDb:P40327 PeptideAtlas:P40327 PRIDE:P40327 EnsemblFungi:YDL007W
GeneID:851557 KEGG:sce:YDL007W NextBio:968983 Genevestigator:P40327
GermOnline:YDL007W Uniprot:P40327
Length = 437
Score = 695 (249.7 bits), Expect = 1.7e-68, P = 1.7e-68
Identities = 135/308 (43%), Positives = 203/308 (65%)
Query: 61 SDTGLAAPSQWDLVSDKQMMQEEQ--PLQVARCTKIINPNSEDSKYVINVKQIAKFVVGL 118
S++ + P + +K+ ++E + PL + +II +D ++ + + V +
Sbjct: 77 SNSEILKPFEKKQEEEKKQLEEIRGNPLSIGTLEEII----DDDHAIVTSPTMPDYYVSI 132
Query: 119 GDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIE 178
V +E G V + I L DP V++M +++ P +Y+D+GG + QI+
Sbjct: 133 LSFVDKELLEPGCSVLLHHKTMSIVGVLQDDADPMVSVMKMDKSPTESYSDIGGLESQIQ 192
Query: 179 KMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 238
+++E VELP+ HPE + ++GI PPKGV+ YG PGTGKTLLA+AVAN+T A F+R++GSEL
Sbjct: 193 EIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSEL 252
Query: 239 VQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQ 298
+QKY+G+G R+ R++F++A IVF DE+DAIG R+D GG+ E+QRTMLE++NQ
Sbjct: 253 IQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQ 312
Query: 299 LDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCE 358
LDGFD RG++KV+MATN+ +TLDPAL+RPGR+DRK+ F PDL ++ +I IHT MN
Sbjct: 313 LDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFENPDLSTKKKILGIHTSKMNLS 372
Query: 359 RDIRFELL 366
D+ E L
Sbjct: 373 EDVNLETL 380
>UNIPROTKB|O42587 [details] [associations]
symbol:psmc3-a "26S protease regulatory subunit 6A-A"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 CTD:4913 TIGRFAMs:TIGR01242 EMBL:Y10461
RefSeq:NP_001080249.1 UniGene:Xl.12803 ProteinModelPortal:O42587
PRIDE:O42587 GeneID:379941 KEGG:xla:379941 Xenbase:XB-GENE-962533
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 Uniprot:O42587
Length = 405
Score = 688 (247.2 bits), Expect = 9.2e-68, P = 9.2e-68
Identities = 137/259 (52%), Positives = 182/259 (70%)
Query: 115 VVGLGD--KVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGG 172
V+GL D K+ P D+ VGV+++ Y I LP + D V M V+E+P Y+D+GG
Sbjct: 120 VIGLVDAEKLKPGDL-----VGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGG 174
Query: 173 CKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIR 232
+QI+++ E + LPM H EKF LGI PPKGVL YGPPGTGKTLLARA A +T A F++
Sbjct: 175 LDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLK 234
Query: 233 VIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTM 292
+ G +LVQ ++G+GA++VR+ F +A+ K I+F DE+DAIG RFD GD EVQRTM
Sbjct: 235 LAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTM 294
Query: 293 LEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHT 352
LE++NQLDGF +KV+ ATNR D LDPALLR GRLDRK+EF +P+ E+R +I +IH+
Sbjct: 295 LELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHS 354
Query: 353 RTMNCERDIRFELLSRLCP 371
R MN D+ +E L+R CP
Sbjct: 355 RKMNVSPDVNYEELAR-CP 372
>GENEDB_PFALCIPARUM|PFD0665c [details] [associations]
symbol:PFD0665c "26s proteasome aaa-ATPase
subunit Rpt3, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
EMBL:AL844503 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK ProtClustDB:PTZ00454 GO:GO:0005838
RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1 IntAct:Q8I1V1
MINT:MINT-1573247 PRIDE:Q8I1V1 EnsemblProtists:PFD0665c:mRNA
GeneID:812570 KEGG:pfa:PFD0665c EuPathDB:PlasmoDB:PF3D7_0413600
Uniprot:Q8I1V1
Length = 392
Score = 686 (246.5 bits), Expect = 1.5e-67, P = 1.5e-67
Identities = 146/334 (43%), Positives = 207/334 (61%)
Query: 34 YSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQ--PLQVARC 91
Y +K +K+I D+ D IKE L +L+ K ++ Q PL + +
Sbjct: 13 YYIRLKNLKKQI-DILNIQEDY--IKEEHKNLKR----ELIRSKNEIKRIQSVPLIIGQF 65
Query: 92 TKIINPNSEDSKY-VINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKI 150
II D+ Y +++ + + V + ++ D++ + V + R+ + I LP +
Sbjct: 66 LDII-----DNNYGIVSSTAGSNYYVRILSTLNKEDLKPSVSVALHRHSHSIVNILPSES 120
Query: 151 DPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGP 210
D S+ ++ + E+P+V Y D+GG Q ++M+E VELP+ PE + K+GI+PP G+L YGP
Sbjct: 121 DSSIQLLQITERPNVKYTDLGGLDMQKQEMKEAVELPLTCPELYEKIGIEPPMGILIYGP 180
Query: 211 PGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEV 270
PGTGKT+L +AVAN T FI V+GSE VQKY+GEG RMVR++F++AR I+F DEV
Sbjct: 181 PGTGKTMLVKAVANETQVTFIGVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEV 240
Query: 271 DAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRL 330
DAI RFD G D EVQR +LE++NQ+DGFD N+KV+MATNR DTLDPALLRPGRL
Sbjct: 241 DAIATKRFDAQTGADREVQRILLELLNQMDGFDKSTNVKVIMATNRADTLDPALLRPGRL 300
Query: 331 DRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFE 364
DRK+EF LPD + + IF+ MN D+ E
Sbjct: 301 DRKIEFPLPDRKQKRLIFQTIISKMNVSSDVNIE 334
>UNIPROTKB|O42586 [details] [associations]
symbol:psmc3-b "26S protease regulatory subunit 6A-B"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 EMBL:Y10460 UniGene:Xl.113 ProteinModelPortal:O42586
Xenbase:XB-GENE-1009853 Uniprot:O42586
Length = 404
Score = 686 (246.5 bits), Expect = 1.5e-67, P = 1.5e-67
Identities = 136/263 (51%), Positives = 182/263 (69%)
Query: 115 VVGLGD--KVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGG 172
V+GL D K+ P D+ VGV+++ Y I LP + D V M V+E+P Y+D+GG
Sbjct: 101 VIGLVDAEKLKPGDL-----VGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGG 155
Query: 173 CKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIR 232
+QI+++ E + LPM H EKF LGI PPKGVL YGPPGTGKTLLARA A +T A F++
Sbjct: 156 LDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLK 215
Query: 233 VIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTM 292
+ G +LVQ ++G+GA++VR+ F +A+ K I+F DE+DAIG RFD GD EVQRTM
Sbjct: 216 LAGPQLVQMFIGDGAKLVRDAFSLAKEKAPSIIFIDELDAIGNKRFDSEKAGDREVQRTM 275
Query: 293 LEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHT 352
LE++NQLDGF +KV+ ATNR D LDPALLR GRLDRK+EF +P+ E+R +I +IH+
Sbjct: 276 LELLNQLDGFQPTTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHS 335
Query: 353 RTMNCERDIRFELLSRLCPNSTG 375
R MN D+ +E L+R + G
Sbjct: 336 RKMNVSPDVNYEELARCTDDFNG 358
>UNIPROTKB|Q8I1V1 [details] [associations]
symbol:PFD0665c "26S proteasome AAA-ATPase subunit RPT3,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 HSSP:Q01853 EMBL:AL844503 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK ProtClustDB:PTZ00454
GO:GO:0005838 RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1
IntAct:Q8I1V1 MINT:MINT-1573247 PRIDE:Q8I1V1
EnsemblProtists:PFD0665c:mRNA GeneID:812570 KEGG:pfa:PFD0665c
EuPathDB:PlasmoDB:PF3D7_0413600 Uniprot:Q8I1V1
Length = 392
Score = 686 (246.5 bits), Expect = 1.5e-67, P = 1.5e-67
Identities = 146/334 (43%), Positives = 207/334 (61%)
Query: 34 YSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQ--PLQVARC 91
Y +K +K+I D+ D IKE L +L+ K ++ Q PL + +
Sbjct: 13 YYIRLKNLKKQI-DILNIQEDY--IKEEHKNLKR----ELIRSKNEIKRIQSVPLIIGQF 65
Query: 92 TKIINPNSEDSKY-VINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKI 150
II D+ Y +++ + + V + ++ D++ + V + R+ + I LP +
Sbjct: 66 LDII-----DNNYGIVSSTAGSNYYVRILSTLNKEDLKPSVSVALHRHSHSIVNILPSES 120
Query: 151 DPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGP 210
D S+ ++ + E+P+V Y D+GG Q ++M+E VELP+ PE + K+GI+PP G+L YGP
Sbjct: 121 DSSIQLLQITERPNVKYTDLGGLDMQKQEMKEAVELPLTCPELYEKIGIEPPMGILIYGP 180
Query: 211 PGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEV 270
PGTGKT+L +AVAN T FI V+GSE VQKY+GEG RMVR++F++AR I+F DEV
Sbjct: 181 PGTGKTMLVKAVANETQVTFIGVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEV 240
Query: 271 DAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRL 330
DAI RFD G D EVQR +LE++NQ+DGFD N+KV+MATNR DTLDPALLRPGRL
Sbjct: 241 DAIATKRFDAQTGADREVQRILLELLNQMDGFDKSTNVKVIMATNRADTLDPALLRPGRL 300
Query: 331 DRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFE 364
DRK+EF LPD + + IF+ MN D+ E
Sbjct: 301 DRKIEFPLPDRKQKRLIFQTIISKMNVSSDVNIE 334
>DICTYBASE|DDB_G0284517 [details] [associations]
symbol:psmC6 "26S protease regulatory subunit S10B"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0284517
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000153_GR
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
EMBL:AAFI02000066 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
RefSeq:XP_638541.1 ProteinModelPortal:Q54PJ1 STRING:Q54PJ1
EnsemblProtists:DDB0232968 GeneID:8624634 KEGG:ddi:DDB_G0284517
OMA:HAANITK ProtClustDB:CLSZ2429012 Uniprot:Q54PJ1
Length = 393
Score = 685 (246.2 bits), Expect = 1.9e-67, P = 1.9e-67
Identities = 124/271 (45%), Positives = 182/271 (67%)
Query: 100 EDSKYVINVKQIAKFVVGLGDKVSPTDI-EEGMRVGVDRNKYQIQIPLPPKIDPSVTMMT 158
++ ++++ ++VV + + G RV +D I LP ++DP + MT
Sbjct: 68 DEERFIVKACNGPRYVVRCANYQDKAHLLVPGARVTLDLTTLTILKILPREVDPIIFNMT 127
Query: 159 VEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLL 218
E V+Y ++GG QI ++REVVELP++ PE F+++GI PKGVL YGPPGTGKTLL
Sbjct: 128 AESPGSVSYGEIGGLSNQIRELREVVELPLMIPELFIRVGIKAPKGVLLYGPPGTGKTLL 187
Query: 219 ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARF 278
ARA+A+ +A F++V+ S +V KY+GE AR++RE+F AR + C++F DE+DAIGG RF
Sbjct: 188 ARAIASNLEANFLKVVSSAIVDKYIGESARVIREMFGYARDHQPCVIFMDEIDAIGGRRF 247
Query: 279 DDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGL 338
+G D E+QRT++E++NQ+DGFD +K++MATNRPD LDPALLRPGRLDRK+E L
Sbjct: 248 SEGTSADREIQRTLMELLNQMDGFDTLSKVKIIMATNRPDVLDPALLRPGRLDRKIEIPL 307
Query: 339 PDLESRTQIFKIHTRTMNCERDIRFELLSRL 369
P+ R + KIH + D+ +E +++L
Sbjct: 308 PNEAGRVDVLKIHAANITKHGDVDYEAIAKL 338
>UNIPROTKB|F1NDQ1 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00819977
Ensembl:ENSGALT00000013163 Uniprot:F1NDQ1
Length = 385
Score = 684 (245.8 bits), Expect = 2.4e-67, P = 2.4e-67
Identities = 136/263 (51%), Positives = 182/263 (69%)
Query: 115 VVGLGD--KVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGG 172
V+GL D K+ P D+ VGV+++ Y I LP + D V M V+E+P Y+D+GG
Sbjct: 82 VIGLVDAEKLKPGDL-----VGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGG 136
Query: 173 CKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIR 232
+QI+++ E + LPM H EKF LGI PPKGVL YGPPGTGKTLLARA A +T A F++
Sbjct: 137 LDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLK 196
Query: 233 VIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTM 292
+ G +LVQ ++G+GA++VR+ F +A+ K I+F DE+DAIG RFD GD EVQRTM
Sbjct: 197 LAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTM 256
Query: 293 LEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHT 352
LE++NQLDGF +KV+ ATNR D LDPALLR GRLDRK+EF +P+ E+R +I +IH+
Sbjct: 257 LELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHS 316
Query: 353 RTMNCERDIRFELLSRLCPNSTG 375
R MN D+ +E L+R + G
Sbjct: 317 RKMNVSPDVNYEELARCTDDFNG 339
>UNIPROTKB|F1P3L9 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242 OMA:GALMYGP
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00601469
Ensembl:ENSGALT00000038503 Uniprot:F1P3L9
Length = 389
Score = 684 (245.8 bits), Expect = 2.4e-67, P = 2.4e-67
Identities = 136/263 (51%), Positives = 182/263 (69%)
Query: 115 VVGLGD--KVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGG 172
V+GL D K+ P D+ VGV+++ Y I LP + D V M V+E+P Y+D+GG
Sbjct: 86 VIGLVDAEKLKPGDL-----VGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGG 140
Query: 173 CKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIR 232
+QI+++ E + LPM H EKF LGI PPKGVL YGPPGTGKTLLARA A +T A F++
Sbjct: 141 LDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLK 200
Query: 233 VIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTM 292
+ G +LVQ ++G+GA++VR+ F +A+ K I+F DE+DAIG RFD GD EVQRTM
Sbjct: 201 LAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTM 260
Query: 293 LEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHT 352
LE++NQLDGF +KV+ ATNR D LDPALLR GRLDRK+EF +P+ E+R +I +IH+
Sbjct: 261 LELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHS 320
Query: 353 RTMNCERDIRFELLSRLCPNSTG 375
R MN D+ +E L+R + G
Sbjct: 321 RKMNVSPDVNYEELARCTDDFNG 343
>UNIPROTKB|F1PBK7 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:AAEX03011486
Ensembl:ENSCAFT00000013842 Uniprot:F1PBK7
Length = 439
Score = 684 (245.8 bits), Expect = 2.4e-67, P = 2.4e-67
Identities = 136/263 (51%), Positives = 182/263 (69%)
Query: 115 VVGLGD--KVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGG 172
V+GL D K+ P D+ VGV+++ Y I LP + D V M V+E+P Y+D+GG
Sbjct: 136 VIGLVDAEKLKPGDL-----VGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGG 190
Query: 173 CKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIR 232
+QI+++ E + LPM H EKF LGI PPKGVL YGPPGTGKTLLARA A +T A F++
Sbjct: 191 LDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLK 250
Query: 233 VIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTM 292
+ G +LVQ ++G+GA++VR+ F +A+ K I+F DE+DAIG RFD GD EVQRTM
Sbjct: 251 LAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTM 310
Query: 293 LEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHT 352
LE++NQLDGF +KV+ ATNR D LDPALLR GRLDRK+EF +P+ E+R +I +IH+
Sbjct: 311 LELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHS 370
Query: 353 RTMNCERDIRFELLSRLCPNSTG 375
R MN D+ +E L+R + G
Sbjct: 371 RKMNVSPDVNYEELARCTDDFNG 393
>UNIPROTKB|E9PM69 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AC090559 TIGRFAMs:TIGR01242 HGNC:HGNC:9549
ChiTaRS:PSMC3 IPI:IPI00979423 ProteinModelPortal:E9PM69 SMR:E9PM69
PRIDE:E9PM69 Ensembl:ENST00000530912 ArrayExpress:E9PM69
Bgee:E9PM69 Uniprot:E9PM69
Length = 397
Score = 684 (245.8 bits), Expect = 2.4e-67, P = 2.4e-67
Identities = 136/263 (51%), Positives = 182/263 (69%)
Query: 115 VVGLGD--KVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGG 172
V+GL D K+ P D+ VGV+++ Y I LP + D V M V+E+P Y+D+GG
Sbjct: 94 VIGLVDAEKLKPGDL-----VGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGG 148
Query: 173 CKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIR 232
+QI+++ E + LPM H EKF LGI PPKGVL YGPPGTGKTLLARA A +T A F++
Sbjct: 149 LDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLK 208
Query: 233 VIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTM 292
+ G +LVQ ++G+GA++VR+ F +A+ K I+F DE+DAIG RFD GD EVQRTM
Sbjct: 209 LAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTM 268
Query: 293 LEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHT 352
LE++NQLDGF +KV+ ATNR D LDPALLR GRLDRK+EF +P+ E+R +I +IH+
Sbjct: 269 LELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHS 328
Query: 353 RTMNCERDIRFELLSRLCPNSTG 375
R MN D+ +E L+R + G
Sbjct: 329 RKMNVSPDVNYEELARCTDDFNG 351
>UNIPROTKB|P17980 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0001824
"blastocyst development" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0003714
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
EMBL:CH471064 Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981
GO:GO:0044281 GO:GO:0000082 GO:GO:0003713 GO:GO:0051436
GO:GO:0017111 GO:GO:0000932 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
GO:GO:0001824 Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 OMA:GALMYGP
EMBL:AK313518 EMBL:BC008713 EMBL:BC073165 EMBL:BC106920
EMBL:BC107804 EMBL:AK222485 EMBL:M34079 EMBL:CR456731
IPI:IPI00018398 PIR:A34832 RefSeq:NP_002795.2 UniGene:Hs.250758
ProteinModelPortal:P17980 SMR:P17980 DIP:DIP-27555N IntAct:P17980
MINT:MINT-1149785 STRING:P17980 PhosphoSite:P17980 DMDM:20532406
REPRODUCTION-2DPAGE:IPI00018398 PaxDb:P17980 PeptideAtlas:P17980
PRIDE:P17980 DNASU:5702 Ensembl:ENST00000298852 GeneID:5702
KEGG:hsa:5702 UCSC:uc001nfh.2 CTD:5702 GeneCards:GC11M047440
HGNC:HGNC:9549 HPA:HPA006065 MIM:186852 neXtProt:NX_P17980
PharmGKB:PA33894 InParanoid:P17980 OrthoDB:EOG46143Z
PhylomeDB:P17980 ChiTaRS:PSMC3 GenomeRNAi:5702 NextBio:22154
PMAP-CutDB:P17980 ArrayExpress:P17980 Bgee:P17980 CleanEx:HS_PSMC3
Genevestigator:P17980 GermOnline:ENSG00000165916 Uniprot:P17980
Length = 439
Score = 684 (245.8 bits), Expect = 2.4e-67, P = 2.4e-67
Identities = 136/263 (51%), Positives = 182/263 (69%)
Query: 115 VVGLGD--KVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGG 172
V+GL D K+ P D+ VGV+++ Y I LP + D V M V+E+P Y+D+GG
Sbjct: 136 VIGLVDAEKLKPGDL-----VGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGG 190
Query: 173 CKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIR 232
+QI+++ E + LPM H EKF LGI PPKGVL YGPPGTGKTLLARA A +T A F++
Sbjct: 191 LDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLK 250
Query: 233 VIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTM 292
+ G +LVQ ++G+GA++VR+ F +A+ K I+F DE+DAIG RFD GD EVQRTM
Sbjct: 251 LAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTM 310
Query: 293 LEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHT 352
LE++NQLDGF +KV+ ATNR D LDPALLR GRLDRK+EF +P+ E+R +I +IH+
Sbjct: 311 LELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHS 370
Query: 353 RTMNCERDIRFELLSRLCPNSTG 375
R MN D+ +E L+R + G
Sbjct: 371 RKMNVSPDVNYEELARCTDDFNG 393
>UNIPROTKB|F1SID4 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:CU856312
Ensembl:ENSSSCT00000014459 Uniprot:F1SID4
Length = 446
Score = 684 (245.8 bits), Expect = 2.4e-67, P = 2.4e-67
Identities = 136/263 (51%), Positives = 182/263 (69%)
Query: 115 VVGLGD--KVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGG 172
V+GL D K+ P D+ VGV+++ Y I LP + D V M V+E+P Y+D+GG
Sbjct: 143 VIGLVDAEKLKPGDL-----VGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGG 197
Query: 173 CKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIR 232
+QI+++ E + LPM H EKF LGI PPKGVL YGPPGTGKTLLARA A +T A F++
Sbjct: 198 LDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLK 257
Query: 233 VIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTM 292
+ G +LVQ ++G+GA++VR+ F +A+ K I+F DE+DAIG RFD GD EVQRTM
Sbjct: 258 LAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTM 317
Query: 293 LEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHT 352
LE++NQLDGF +KV+ ATNR D LDPALLR GRLDRK+EF +P+ E+R +I +IH+
Sbjct: 318 LELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHS 377
Query: 353 RTMNCERDIRFELLSRLCPNSTG 375
R MN D+ +E L+R + G
Sbjct: 378 RKMNVSPDVNYEELARCTDDFNG 400
>MGI|MGI:1098754 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit,
ATPase 3" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1098754 GO:GO:0005524 GO:GO:0005634
GO:GO:0030163 GO:GO:0017111 GO:GO:0000932
GeneTree:ENSGT00560000077230 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624
CTD:5702 ChiTaRS:PSMC3 EMBL:D49686 EMBL:AB040858 EMBL:AY902337
EMBL:AL691439 EMBL:BC005783 IPI:IPI00133206 RefSeq:NP_032974.2
UniGene:Mm.289832 ProteinModelPortal:O88685 SMR:O88685
IntAct:O88685 STRING:O88685 PhosphoSite:O88685 PaxDb:O88685
PRIDE:O88685 Ensembl:ENSMUST00000067663 GeneID:19182 KEGG:mmu:19182
NextBio:295874 Bgee:O88685 Genevestigator:O88685
GermOnline:ENSMUSG00000002102 Uniprot:O88685
Length = 442
Score = 684 (245.8 bits), Expect = 2.4e-67, P = 2.4e-67
Identities = 136/263 (51%), Positives = 182/263 (69%)
Query: 115 VVGLGD--KVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGG 172
V+GL D K+ P D+ VGV+++ Y I LP + D V M V+E+P Y+D+GG
Sbjct: 139 VIGLVDAEKLKPGDL-----VGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGG 193
Query: 173 CKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIR 232
+QI+++ E + LPM H EKF LGI PPKGVL YGPPGTGKTLLARA A +T A F++
Sbjct: 194 LDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLK 253
Query: 233 VIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTM 292
+ G +LVQ ++G+GA++VR+ F +A+ K I+F DE+DAIG RFD GD EVQRTM
Sbjct: 254 LAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTM 313
Query: 293 LEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHT 352
LE++NQLDGF +KV+ ATNR D LDPALLR GRLDRK+EF +P+ E+R +I +IH+
Sbjct: 314 LELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHS 373
Query: 353 RTMNCERDIRFELLSRLCPNSTG 375
R MN D+ +E L+R + G
Sbjct: 374 RKMNVSPDVNYEELARCTDDFNG 396
>RGD|61905 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit, ATPase
3" species:10116 "Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0001824 "blastocyst development"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA;ISO;ISS]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:61905 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0030163 GO:GO:0017111
GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
KO:K03065 GO:GO:0022624 CTD:5702 EMBL:D83522 EMBL:U77918
IPI:IPI00421528 RefSeq:NP_113783.1 UniGene:Rn.11173
ProteinModelPortal:Q63569 IntAct:Q63569 STRING:Q63569
PhosphoSite:Q63569 PRIDE:Q63569 GeneID:29677 KEGG:rno:29677
UCSC:RGD:61905 NextBio:610019 ArrayExpress:Q63569
Genevestigator:Q63569 GermOnline:ENSRNOG00000011414 Uniprot:Q63569
Length = 439
Score = 684 (245.8 bits), Expect = 2.4e-67, P = 2.4e-67
Identities = 136/263 (51%), Positives = 182/263 (69%)
Query: 115 VVGLGD--KVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGG 172
V+GL D K+ P D+ VGV+++ Y I LP + D V M V+E+P Y+D+GG
Sbjct: 136 VIGLVDAEKLKPGDL-----VGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGG 190
Query: 173 CKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIR 232
+QI+++ E + LPM H EKF LGI PPKGVL YGPPGTGKTLLARA A +T A F++
Sbjct: 191 LDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLK 250
Query: 233 VIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTM 292
+ G +LVQ ++G+GA++VR+ F +A+ K I+F DE+DAIG RFD GD EVQRTM
Sbjct: 251 LAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTM 310
Query: 293 LEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHT 352
LE++NQLDGF +KV+ ATNR D LDPALLR GRLDRK+EF +P+ E+R +I +IH+
Sbjct: 311 LELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHS 370
Query: 353 RTMNCERDIRFELLSRLCPNSTG 375
R MN D+ +E L+R + G
Sbjct: 371 RKMNVSPDVNYEELARCTDDFNG 393
>UNIPROTKB|Q6P6U2 [details] [associations]
symbol:Psmc3 "26S protease regulatory subunit 6A"
species:10116 "Rattus norvegicus" [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:61905 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:CH473949
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
IPI:IPI00421528 UniGene:Rn.11173 EMBL:BC062019 SMR:Q6P6U2
IntAct:Q6P6U2 STRING:Q6P6U2 Ensembl:ENSRNOT00000015757
Genevestigator:Q6P6U2 Uniprot:Q6P6U2
Length = 442
Score = 684 (245.8 bits), Expect = 2.4e-67, P = 2.4e-67
Identities = 136/263 (51%), Positives = 182/263 (69%)
Query: 115 VVGLGD--KVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGG 172
V+GL D K+ P D+ VGV+++ Y I LP + D V M V+E+P Y+D+GG
Sbjct: 139 VIGLVDAEKLKPGDL-----VGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGG 193
Query: 173 CKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIR 232
+QI+++ E + LPM H EKF LGI PPKGVL YGPPGTGKTLLARA A +T A F++
Sbjct: 194 LDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLK 253
Query: 233 VIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTM 292
+ G +LVQ ++G+GA++VR+ F +A+ K I+F DE+DAIG RFD GD EVQRTM
Sbjct: 254 LAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTM 313
Query: 293 LEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHT 352
LE++NQLDGF +KV+ ATNR D LDPALLR GRLDRK+EF +P+ E+R +I +IH+
Sbjct: 314 LELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHS 373
Query: 353 RTMNCERDIRFELLSRLCPNSTG 375
R MN D+ +E L+R + G
Sbjct: 374 RKMNVSPDVNYEELARCTDDFNG 396
>GENEDB_PFALCIPARUM|PF10_0081 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory
subunit 4, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 683 (245.5 bits), Expect = 3.1e-67, P = 3.1e-67
Identities = 131/280 (46%), Positives = 193/280 (68%)
Query: 85 PLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQI 144
P+ V ++I+ N +I ++ V + V +E G V ++ +
Sbjct: 114 PVSVGTLEELIDENHG----IIATSVGPEYYVNILSFVDKDLLEPGCSVLLNNKTNSVVG 169
Query: 145 PLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKG 204
L ++DP V++M VE+ P +Y D+GG + QI++++E VELP+ HPE + +GI PPKG
Sbjct: 170 ILLDEVDPLVSVMKVEKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKG 229
Query: 205 VLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACI 264
V+ YGPPGTGKTLLA+AVAN T A F+RV+GSEL+QKY+G+G ++VRE+F++A I
Sbjct: 230 VILYGPPGTGKTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSI 289
Query: 265 VFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPAL 324
VF DE+DA+G R++ GG+ E+QRTMLE++NQLDGFD+RG++KV+MATNR D+LDPAL
Sbjct: 290 VFIDEIDAVGTKRYEATSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPAL 349
Query: 325 LRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFE 364
+RPGR+DRK++ PD +++ +IF+IHT M D+ E
Sbjct: 350 IRPGRIDRKIQLPNPDTKTKRRIFQIHTSKMTMSPDVDLE 389
>UNIPROTKB|Q8IJW0 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory subunit 4,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 683 (245.5 bits), Expect = 3.1e-67, P = 3.1e-67
Identities = 131/280 (46%), Positives = 193/280 (68%)
Query: 85 PLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQI 144
P+ V ++I+ N +I ++ V + V +E G V ++ +
Sbjct: 114 PVSVGTLEELIDENHG----IIATSVGPEYYVNILSFVDKDLLEPGCSVLLNNKTNSVVG 169
Query: 145 PLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKG 204
L ++DP V++M VE+ P +Y D+GG + QI++++E VELP+ HPE + +GI PPKG
Sbjct: 170 ILLDEVDPLVSVMKVEKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKG 229
Query: 205 VLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACI 264
V+ YGPPGTGKTLLA+AVAN T A F+RV+GSEL+QKY+G+G ++VRE+F++A I
Sbjct: 230 VILYGPPGTGKTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSI 289
Query: 265 VFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPAL 324
VF DE+DA+G R++ GG+ E+QRTMLE++NQLDGFD+RG++KV+MATNR D+LDPAL
Sbjct: 290 VFIDEIDAVGTKRYEATSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPAL 349
Query: 325 LRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFE 364
+RPGR+DRK++ PD +++ +IF+IHT M D+ E
Sbjct: 350 IRPGRIDRKIQLPNPDTKTKRRIFQIHTSKMTMSPDVDLE 389
>ZFIN|ZDB-GENE-030131-666 [details] [associations]
symbol:psmc3 "proteasome (prosome, macropain) 26S
subunit, ATPase, 3" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-666 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 EMBL:BX957297 IPI:IPI00817732 PRIDE:F1QJQ2
Ensembl:ENSDART00000133705 ArrayExpress:F1QJQ2 Bgee:F1QJQ2
Uniprot:F1QJQ2
Length = 427
Score = 682 (245.1 bits), Expect = 4.0e-67, P = 4.0e-67
Identities = 137/263 (52%), Positives = 182/263 (69%)
Query: 115 VVGLGD--KVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGG 172
V+GL D K+ P D+ VGV+++ Y I LP + D V M V+E+P Y+D+GG
Sbjct: 124 VIGLVDAEKLKPGDL-----VGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGG 178
Query: 173 CKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIR 232
+QI+++ E + LPM H EKF LGI PPKGVL YGPPGTGKTLLARA A +T A F++
Sbjct: 179 LDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLK 238
Query: 233 VIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTM 292
+ G +LVQ ++G+GA++VR+ F +A+ K I+F DE+DAIG RFD GD EVQRTM
Sbjct: 239 LAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTM 298
Query: 293 LEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHT 352
LE++NQLDGF +KV+ ATNR D LDPALLR GRLDRK+EF +P+ E+R +I +IH+
Sbjct: 299 LELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHS 358
Query: 353 RTMNCERDIRFELLSRLCPNSTG 375
R MN D+ FE L+R + G
Sbjct: 359 RKMNVCPDVNFEELARCTDDFNG 381
>FB|FBgn0028686 [details] [associations]
symbol:Rpt3 "Regulatory particle triple-A ATPase 3"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0005838 "proteasome regulatory particle"
evidence=ISS;IDA] [GO:0001673 "male germ cell nucleus"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:AE014298 GO:GO:0006508
GO:GO:0006974 GO:GO:0016887 GO:GO:0004175 GO:GO:0001673
GO:GO:0030163 HSSP:Q01853 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0008540 BRENDA:3.4.25.1 KO:K03063 OMA:DQTTNVK
GeneTree:ENSGT00550000074962 EMBL:AF145306 EMBL:BT046144
EMBL:FN544098 EMBL:FN544099 EMBL:FN544100 EMBL:FN544101
EMBL:FN544102 EMBL:FN544103 EMBL:FN544104 EMBL:FN544105
EMBL:FN544106 EMBL:FN544108 RefSeq:NP_572686.1 UniGene:Dm.8238
SMR:Q9V405 STRING:Q9V405 EnsemblMetazoa:FBtr0073436 GeneID:32047
KEGG:dme:Dmel_CG16916 UCSC:CG16916-RA CTD:32047 FlyBase:FBgn0028686
InParanoid:Q9V405 OrthoDB:EOG4P5HRH GenomeRNAi:32047 NextBio:776548
Uniprot:Q9V405
Length = 413
Score = 681 (244.8 bits), Expect = 5.1e-67, P = 5.1e-67
Identities = 126/219 (57%), Positives = 163/219 (74%)
Query: 146 LPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGV 205
LPP+ D S++M+ +EKPDV+Y D+GG Q +++RE VELP+ H E + ++GIDPP+GV
Sbjct: 138 LPPEADSSISMLQPDEKPDVSYADIGGMDMQKQEIREAVELPLTHFELYKQIGIDPPRGV 197
Query: 206 LCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIV 265
L YGPPG GKT+LA+AVA+ T A FIRV+GSE VQKY+GEG RMVR++F++A+ I+
Sbjct: 198 LMYGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAII 257
Query: 266 FFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALL 325
F DE+DAI RFD G D EVQR +LE++NQ+DGFD N+KV+MATNR DTLDPALL
Sbjct: 258 FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALL 317
Query: 326 RPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFE 364
RPGRLDRK+EF LPD + +F T MN D+ E
Sbjct: 318 RPGRLDRKIEFPLPDRRQKRLVFSTITSKMNLSEDVDLE 356
>FB|FBgn0037742 [details] [associations]
symbol:Rpt3R "Regulatory particle triple-A ATPase 3-related"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 EMBL:AE014297 GO:GO:0005524
GO:GO:0005737 GO:GO:0006200 GO:GO:0006974 GO:GO:0016887
GO:GO:0030163 TIGRFAMs:TIGR01242 KO:K03063
GeneTree:ENSGT00550000074962 FlyBase:FBgn0037742 EMBL:BT016035
RefSeq:NP_649938.2 UniGene:Dm.21651 SMR:Q9VH79 STRING:Q9VH79
EnsemblMetazoa:FBtr0301536 EnsemblMetazoa:FBtr0332172 GeneID:41190
KEGG:dme:Dmel_CG9475 UCSC:CG9475-RA CTD:41190 InParanoid:Q9VH79
OMA:KQSNCLV OrthoDB:EOG49GHZ0 GenomeRNAi:41190 NextBio:822637
Uniprot:Q9VH79
Length = 405
Score = 678 (243.7 bits), Expect = 1.1e-66, P = 1.1e-66
Identities = 142/347 (40%), Positives = 217/347 (62%)
Query: 26 LKTY-GLGPYSTSI--KKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQE 82
L+ Y GL P+ + KK + E+ ++ + D IKE L ++ ++ +
Sbjct: 16 LEKYDGLDPHDLYVLYKKLQMEL-ELIQVQEDY--IKEEQRNLK--KEFIHAQEEVKRIK 70
Query: 83 EQPLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQI 142
PL + + + ++ N+ ++ + + V + + ++ VG+ + +
Sbjct: 71 AVPLVIGQFLEAVDENNG----IVASTTGSNYYVRVLSTIDREQLKPSSSVGLHKQSNCL 126
Query: 143 QIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPP 202
+PP+ D +++M++ +EKPD++Y+D+GG Q +++RE VELP+ H + + ++GIDPP
Sbjct: 127 VDLVPPEADSTISMLSPDEKPDISYSDIGGLDIQKQEIREAVELPLTHAQLYKQIGIDPP 186
Query: 203 KGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKA 262
+GVL +GPPG GKT+LA+AVA+ T A FIRV+GSE VQKY+GEG RMVR+LF++A+
Sbjct: 187 RGVLLFGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDLFRLAKQNSP 246
Query: 263 CIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDP 322
I+F DE+DAI RFD G D EVQR +LE++NQ+DGFD NIKV+MATNR DTLDP
Sbjct: 247 SIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDETTNIKVIMATNRADTLDP 306
Query: 323 ALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFE-LLSR 368
ALLRPGRLDRK+E LPD + +F T MN D+ E +++R
Sbjct: 307 ALLRPGRLDRKIELPLPDRRQKRLVFTTITSKMNVGEDVDLEDIIAR 353
>UNIPROTKB|F1MG70 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 OMA:DQTTNVK
IPI:IPI00718026 GeneTree:ENSGT00550000074962 EMBL:DAAA02047067
Ensembl:ENSBTAT00000012391 ArrayExpress:F1MG70 Uniprot:F1MG70
Length = 417
Score = 677 (243.4 bits), Expect = 1.3e-66, P = 1.3e-66
Identities = 126/219 (57%), Positives = 162/219 (73%)
Query: 146 LPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGV 205
LPP+ D S+ M+T ++KPDV Y D+GG Q +++RE VELP+ H E + ++GIDPP+GV
Sbjct: 142 LPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGV 201
Query: 206 LCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIV 265
L YGPPG GKT+LA+AVA+ T A FIRV+GSE VQKY+GEG RMVR++F++A+ I+
Sbjct: 202 LMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAII 261
Query: 266 FFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALL 325
F DE+DAI RFD G D EVQR +LE++NQ+DGFD N+KV+MATNR DTLDPALL
Sbjct: 262 FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALL 321
Query: 326 RPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFE 364
RPGRLDRK+EF LPD + IF T MN ++ E
Sbjct: 322 RPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLE 360
>UNIPROTKB|Q3T030 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 EMBL:BC102595 IPI:IPI00718026
RefSeq:NP_001030255.1 UniGene:Bt.48909 ProteinModelPortal:Q3T030
SMR:Q3T030 STRING:Q3T030 PRIDE:Q3T030 GeneID:510029 KEGG:bta:510029
CTD:5704 InParanoid:Q3T030 OrthoDB:EOG4KD6M4 NextBio:20869245
ArrayExpress:Q3T030 Uniprot:Q3T030
Length = 418
Score = 677 (243.4 bits), Expect = 1.3e-66, P = 1.3e-66
Identities = 126/219 (57%), Positives = 162/219 (73%)
Query: 146 LPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGV 205
LPP+ D S+ M+T ++KPDV Y D+GG Q +++RE VELP+ H E + ++GIDPP+GV
Sbjct: 143 LPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGV 202
Query: 206 LCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIV 265
L YGPPG GKT+LA+AVA+ T A FIRV+GSE VQKY+GEG RMVR++F++A+ I+
Sbjct: 203 LMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAII 262
Query: 266 FFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALL 325
F DE+DAI RFD G D EVQR +LE++NQ+DGFD N+KV+MATNR DTLDPALL
Sbjct: 263 FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALL 322
Query: 326 RPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFE 364
RPGRLDRK+EF LPD + IF T MN ++ E
Sbjct: 323 RPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLE 361
>UNIPROTKB|E2RH48 [details] [associations]
symbol:PSMC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001824 "blastocyst development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 EMBL:AAEX03000950
RefSeq:XP_003638879.1 ProteinModelPortal:E2RH48 SMR:E2RH48
PRIDE:E2RH48 Ensembl:ENSCAFT00000008685 GeneID:100855613
KEGG:cfa:100855613 NextBio:20852115 Uniprot:E2RH48
Length = 418
Score = 677 (243.4 bits), Expect = 1.3e-66, P = 1.3e-66
Identities = 126/219 (57%), Positives = 162/219 (73%)
Query: 146 LPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGV 205
LPP+ D S+ M+T ++KPDV Y D+GG Q +++RE VELP+ H E + ++GIDPP+GV
Sbjct: 143 LPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGV 202
Query: 206 LCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIV 265
L YGPPG GKT+LA+AVA+ T A FIRV+GSE VQKY+GEG RMVR++F++A+ I+
Sbjct: 203 LMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAII 262
Query: 266 FFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALL 325
F DE+DAI RFD G D EVQR +LE++NQ+DGFD N+KV+MATNR DTLDPALL
Sbjct: 263 FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALL 322
Query: 326 RPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFE 364
RPGRLDRK+EF LPD + IF T MN ++ E
Sbjct: 323 RPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLE 361
>UNIPROTKB|P43686 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001824 "blastocyst development" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0006508 "proteolysis" evidence=TAS] [GO:0016887
"ATPase activity" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006521 "regulation of cellular amino acid metabolic process"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
[GO:0006977 "DNA damage response, signal transduction by p53 class
mediator resulting in cell cycle arrest" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006200 "ATP catabolic process" evidence=TAS]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0016887 GO:GO:0051436
GO:GO:0000216 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 GO:GO:0001824 Reactome:REACT_383
EMBL:AC007842 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 EMBL:AF038965 EMBL:U27515 EMBL:AF020736
EMBL:BT007232 EMBL:BC000343 EMBL:BC010396 EMBL:BC014488
IPI:IPI00020042 IPI:IPI00216770 RefSeq:NP_006494.1
RefSeq:NP_694546.1 UniGene:Hs.211594 PDB:2DVW PDBsum:2DVW
ProteinModelPortal:P43686 SMR:P43686 DIP:DIP-29274N IntAct:P43686
MINT:MINT-5004247 STRING:P43686 PhosphoSite:P43686 DMDM:20532409
OGP:P43686 PaxDb:P43686 PRIDE:P43686 DNASU:5704
Ensembl:ENST00000157812 Ensembl:ENST00000455878 GeneID:5704
KEGG:hsa:5704 UCSC:uc002omq.3 UCSC:uc002omr.3 GeneCards:GC19P040477
HGNC:HGNC:9551 HPA:HPA002044 HPA:HPA005471 MIM:602707
neXtProt:NX_P43686 PharmGKB:PA33896 InParanoid:P43686
PhylomeDB:P43686 ChiTaRS:PSMC4 EvolutionaryTrace:P43686
GenomeRNAi:5704 NextBio:22160 ArrayExpress:P43686 Bgee:P43686
CleanEx:HS_PSMC4 Genevestigator:P43686 GermOnline:ENSG00000013275
Uniprot:P43686
Length = 418
Score = 677 (243.4 bits), Expect = 1.3e-66, P = 1.3e-66
Identities = 126/219 (57%), Positives = 162/219 (73%)
Query: 146 LPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGV 205
LPP+ D S+ M+T ++KPDV Y D+GG Q +++RE VELP+ H E + ++GIDPP+GV
Sbjct: 143 LPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGV 202
Query: 206 LCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIV 265
L YGPPG GKT+LA+AVA+ T A FIRV+GSE VQKY+GEG RMVR++F++A+ I+
Sbjct: 203 LMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAII 262
Query: 266 FFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALL 325
F DE+DAI RFD G D EVQR +LE++NQ+DGFD N+KV+MATNR DTLDPALL
Sbjct: 263 FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALL 322
Query: 326 RPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFE 364
RPGRLDRK+EF LPD + IF T MN ++ E
Sbjct: 323 RPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLE 361
>UNIPROTKB|Q4R7L3 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9541 "Macaca fascicularis" [GO:0022624 "proteasome
accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:AB168803
ProteinModelPortal:Q4R7L3 SMR:Q4R7L3 PRIDE:Q4R7L3 Uniprot:Q4R7L3
Length = 418
Score = 677 (243.4 bits), Expect = 1.3e-66, P = 1.3e-66
Identities = 126/219 (57%), Positives = 162/219 (73%)
Query: 146 LPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGV 205
LPP+ D S+ M+T ++KPDV Y D+GG Q +++RE VELP+ H E + ++GIDPP+GV
Sbjct: 143 LPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGV 202
Query: 206 LCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIV 265
L YGPPG GKT+LA+AVA+ T A FIRV+GSE VQKY+GEG RMVR++F++A+ I+
Sbjct: 203 LMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAII 262
Query: 266 FFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALL 325
F DE+DAI RFD G D EVQR +LE++NQ+DGFD N+KV+MATNR DTLDPALL
Sbjct: 263 FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALL 322
Query: 326 RPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFE 364
RPGRLDRK+EF LPD + IF T MN ++ E
Sbjct: 323 RPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLE 361
>MGI|MGI:1346093 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1346093
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 EMBL:CH466593 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962 EMBL:L76223
EMBL:AB040869 EMBL:AK077507 EMBL:AK153991 EMBL:AK160718
EMBL:AK167041 EMBL:BC012708 IPI:IPI00108895 RefSeq:NP_036004.2
UniGene:Mm.29582 PDB:3AJI PDBsum:3AJI ProteinModelPortal:P54775
SMR:P54775 IntAct:P54775 STRING:P54775 PhosphoSite:P54775
REPRODUCTION-2DPAGE:P54775 PaxDb:P54775 PRIDE:P54775
Ensembl:ENSMUST00000032824 GeneID:23996 KEGG:mmu:23996
InParanoid:Q6ZWN9 EvolutionaryTrace:P54775 NextBio:303909
Bgee:P54775 Genevestigator:P54775 GermOnline:ENSMUSG00000030603
Uniprot:P54775
Length = 418
Score = 677 (243.4 bits), Expect = 1.3e-66, P = 1.3e-66
Identities = 126/219 (57%), Positives = 162/219 (73%)
Query: 146 LPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGV 205
LPP+ D S+ M+T ++KPDV Y D+GG Q +++RE VELP+ H E + ++GIDPP+GV
Sbjct: 143 LPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGV 202
Query: 206 LCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIV 265
L YGPPG GKT+LA+AVA+ T A FIRV+GSE VQKY+GEG RMVR++F++A+ I+
Sbjct: 203 LMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAII 262
Query: 266 FFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALL 325
F DE+DAI RFD G D EVQR +LE++NQ+DGFD N+KV+MATNR DTLDPALL
Sbjct: 263 FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALL 322
Query: 326 RPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFE 364
RPGRLDRK+EF LPD + IF T MN ++ E
Sbjct: 323 RPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLE 361
>RGD|621102 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10116 "Rattus norvegicus" [GO:0001824
"blastocyst development" evidence=IEA;ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006200 "ATP catabolic process" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0022624 "proteasome
accessory complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621102 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 GO:GO:0001824 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK CTD:5704 OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962
EMBL:D50695 EMBL:BC063145 IPI:IPI00210158 RefSeq:NP_476463.1
UniGene:Rn.11341 PDB:2DWZ PDBsum:2DWZ ProteinModelPortal:Q63570
SMR:Q63570 IntAct:Q63570 STRING:Q63570 PhosphoSite:Q63570
PRIDE:Q63570 Ensembl:ENSRNOT00000025819 GeneID:117262
KEGG:rno:117262 UCSC:RGD:621102 InParanoid:Q63570
EvolutionaryTrace:Q63570 NextBio:620144 Genevestigator:Q63570
GermOnline:ENSRNOG00000018994 Uniprot:Q63570
Length = 418
Score = 677 (243.4 bits), Expect = 1.3e-66, P = 1.3e-66
Identities = 126/219 (57%), Positives = 162/219 (73%)
Query: 146 LPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGV 205
LPP+ D S+ M+T ++KPDV Y D+GG Q +++RE VELP+ H E + ++GIDPP+GV
Sbjct: 143 LPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGV 202
Query: 206 LCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIV 265
L YGPPG GKT+LA+AVA+ T A FIRV+GSE VQKY+GEG RMVR++F++A+ I+
Sbjct: 203 LMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAII 262
Query: 266 FFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALL 325
F DE+DAI RFD G D EVQR +LE++NQ+DGFD N+KV+MATNR DTLDPALL
Sbjct: 263 FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALL 322
Query: 326 RPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFE 364
RPGRLDRK+EF LPD + IF T MN ++ E
Sbjct: 323 RPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLE 361
>DICTYBASE|DDB_G0289003 [details] [associations]
symbol:psmC4 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0006972 "hyperosmotic response"
evidence=IEP] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=ISS] [GO:0005838 "proteasome regulatory
particle" evidence=ISS] [GO:0004175 "endopeptidase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0289003 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GO:GO:0006508 GenomeReviews:CM000154_GR GO:GO:0006972
GO:GO:0004175 EMBL:AAFI02000129 GO:GO:0030163 GO:GO:0017111
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03063 OMA:DQTTNVK EMBL:L16578
PIR:JN0611 RefSeq:XP_636422.1 ProteinModelPortal:P34123 SMR:P34123
STRING:P34123 PRIDE:P34123 EnsemblProtists:DDB0191435
GeneID:8626913 KEGG:ddi:DDB_G0289003 ProtClustDB:PTZ00454
GO:GO:0005838 Uniprot:P34123
Length = 403
Score = 675 (242.7 bits), Expect = 2.2e-66, P = 2.2e-66
Identities = 125/232 (53%), Positives = 168/232 (72%)
Query: 133 VGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPE 192
V + R+ + LPP+ D S+ ++ +EKP +Y+D+GG Q ++MRE VELP+ H
Sbjct: 115 VALQRHSNALVDTLPPESDSSIHLLGADEKPSESYSDIGGGDIQKQEMREAVELPLTHHN 174
Query: 193 KFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRE 252
+ ++GIDPP+GVL YGPPGTGKT+LA+AVA+ T A FIRV+GSE VQKY+GEG R+VR+
Sbjct: 175 LYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTSAAFIRVVGSEFVQKYLGEGPRLVRD 234
Query: 253 LFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLM 312
+F++AR I+F DE+DAI RFD G D EVQR ++E++NQ+DGFD N+KV+M
Sbjct: 235 VFRLARENSPAIIFIDEIDAIATKRFDAQTGADREVQRILMELLNQMDGFDVSVNVKVIM 294
Query: 313 ATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFE 364
ATNR DTLDPALLRPGRLDRK+EF LPD + IF++ T MN ++ E
Sbjct: 295 ATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLIFQVITSKMNLSDEVDLE 346
>UNIPROTKB|J9NWA6 [details] [associations]
symbol:LOC100687152 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AAEX03026457 Ensembl:ENSCAFT00000026372 OMA:REAVEQP
Uniprot:J9NWA6
Length = 434
Score = 675 (242.7 bits), Expect = 2.2e-66, P = 2.2e-66
Identities = 134/263 (50%), Positives = 181/263 (68%)
Query: 115 VVGLGD--KVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGG 172
V+GL D K+ P D+ VGV+++ Y I LP + D V M V+E+P Y+D+GG
Sbjct: 131 VIGLVDAEKLKPGDL-----VGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGG 185
Query: 173 CKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIR 232
+QI+++ E + LPM H EKF LGI PPKGVL YGPPGTGKTLLARA A +T A F++
Sbjct: 186 LDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLK 245
Query: 233 VIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTM 292
+ G +LVQ ++G+GA++VR+ F +A+ K I+F DE+DA G RFD GD EVQRTM
Sbjct: 246 LAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDATGTKRFDSEKAGDREVQRTM 305
Query: 293 LEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHT 352
LE++NQLDGF +KV+ ATNR D LDPALLR GRLD+K+EF +P+ E+R +I +IH+
Sbjct: 306 LELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDQKIEFPMPNEEARARIMQIHS 365
Query: 353 RTMNCERDIRFELLSRLCPNSTG 375
R MN D+ +E L+R + G
Sbjct: 366 RKMNVSPDVNYEELARCMDDFNG 388
>ASPGD|ASPL0000049719 [details] [associations]
symbol:AN2213 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0043171 "peptide catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001307
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER
OrthoDB:EOG4FN7S6 EMBL:AACD01000035 RefSeq:XP_659817.1
ProteinModelPortal:Q5BB67 STRING:Q5BB67
EnsemblFungi:CADANIAT00008897 GeneID:2875757 KEGG:ani:AN2213.2
Uniprot:Q5BB67
Length = 460
Score = 674 (242.3 bits), Expect = 2.8e-66, P = 2.8e-66
Identities = 128/277 (46%), Positives = 191/277 (68%)
Query: 85 PLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQI 144
P+ V ++I +D +++ ++ V + V +E G + + +
Sbjct: 125 PMGVGNLEELI----DDDHAIVSSATGPEYYVSIMSFVDKDLLEPGASILLHHKTVSVVG 180
Query: 145 PLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKG 204
L + DP V++M +++ P +Y D+GG + QI+++RE VELP+LHPE + ++GI PPKG
Sbjct: 181 VLTEESDPLVSVMKLDKAPTESYADIGGLESQIQEVRESVELPLLHPELYEEMGIKPPKG 240
Query: 205 VLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACI 264
V+ YG PGTGKTLLA+AVAN+T A F+R++GSEL+QKY+G+G R+VR++FQ+A I
Sbjct: 241 VILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLVRQIFQVAAEHAPSI 300
Query: 265 VFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPAL 324
VF DE+DAIG R+D GG+ E+QRTMLE++NQLDGFD RG++KV+MATN+ +TLDPAL
Sbjct: 301 VFIDEIDAIGTKRYDSTSGGEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPAL 360
Query: 325 LRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDI 361
+RPGR+DRK+ F PD ++ +IF +HT M+ D+
Sbjct: 361 IRPGRIDRKILFENPDQNTKKKIFTLHTSKMSLGDDV 397
>SGD|S000005643 [details] [associations]
symbol:RPT5 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005643 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006948 GO:GO:0006511 GO:GO:0017111 EMBL:X90518 EMBL:X94335
GO:GO:0045899 GeneTree:ENSGT00560000077230 GO:GO:0070682
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
GO:GO:0008540 PDB:4B4T PDBsum:4B4T OMA:GALMYGP OrthoDB:EOG40VZZ2
EMBL:X73569 EMBL:Z75025 PIR:S46605 RefSeq:NP_014760.3
RefSeq:NP_014762.3 ProteinModelPortal:P33297 SMR:P33297
DIP:DIP-1590N IntAct:P33297 MINT:MINT-383887 STRING:P33297
PaxDb:P33297 PeptideAtlas:P33297 EnsemblFungi:YOR117W GeneID:854284
GeneID:854286 KEGG:sce:YOR117W KEGG:sce:YOR119C KO:K07178
NextBio:976260 Genevestigator:P33297 GermOnline:YOR117W
Uniprot:P33297
Length = 434
Score = 674 (242.3 bits), Expect = 2.8e-66, P = 2.8e-66
Identities = 137/256 (53%), Positives = 178/256 (69%)
Query: 115 VVGL--GDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGG 172
+VGL DK+ P D+ VGV+++ Y I LP + D V M V+EKP TY+DVGG
Sbjct: 131 MVGLVDPDKLKPNDL-----VGVNKDSYLILDTLPSEFDSRVKAMEVDEKPTETYSDVGG 185
Query: 173 CKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIR 232
+QIE++ E + LPM +KF +GI PKG L YGPPGTGKTLLARA A +T+A F++
Sbjct: 186 LDKQIEELVEAIVLPMKRADKFKDMGIRAPKGALMYGPPGTGKTLLARACAAQTNATFLK 245
Query: 233 VIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTM 292
+ +LVQ Y+GEGA++VR+ F +A+ K I+F DE+DAIG RFD GD EVQRTM
Sbjct: 246 LAAPQLVQMYIGEGAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDSEKSGDREVQRTM 305
Query: 293 LEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHT 352
LE++NQLDGF + +KVL ATNR D LDPALLR GRLDRK+EF LP +SR QI +IH+
Sbjct: 306 LELLNQLDGFSSDDRVKVLAATNRVDVLDPALLRSGRLDRKIEFPLPSEDSRAQILQIHS 365
Query: 353 RTMNCERDIRFELLSR 368
R M + DI ++ L+R
Sbjct: 366 RKMTTDDDINWQELAR 381
>ZFIN|ZDB-GENE-030131-5083 [details] [associations]
symbol:psmc4 "proteasome (prosome, macropain) 26S
subunit, ATPase, 4" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005937
Pfam:PF00004 SMART:SM00382 ZFIN:ZDB-GENE-030131-5083 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 EMBL:BC055215 IPI:IPI00509630
UniGene:Dr.76514 ProteinModelPortal:Q7SXX0 SMR:Q7SXX0 STRING:Q7SXX0
PRIDE:Q7SXX0 InParanoid:Q7SXX0 ArrayExpress:Q7SXX0 Bgee:Q7SXX0
Uniprot:Q7SXX0
Length = 418
Score = 674 (242.3 bits), Expect = 2.8e-66, P = 2.8e-66
Identities = 142/364 (39%), Positives = 218/364 (59%)
Query: 1 MAPEPEDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKE 60
+ +P+D++ N RP + L + KK ++E++ + +V + IK+
Sbjct: 7 LVEKPQDDVPALLNSRPQTGLSFLAPEPEDLEDLYSIYKKLQQELEFL--EVQEEY-IKD 63
Query: 61 SDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGD 120
L ++ ++ + PL + + + ++ N+ ++ + + V +
Sbjct: 64 EQKNLK--KEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTA----IVGSTTGSNYYVRILS 117
Query: 121 KVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKM 180
+ ++ V + ++ + LPP+ D S+ M+T ++KPDV Y+D+GG Q +++
Sbjct: 118 TIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVLYSDIGGMDIQKQEV 177
Query: 181 REVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQ 240
RE VELP+ H E + ++GIDPP+GVL YGPPG GKT+LA+AVA+ T A FIRV+GSE VQ
Sbjct: 178 REAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQ 237
Query: 241 KYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLD 300
KY+GEG RMVR++F++A+ I+F DE+DAI RFD G D EVQR +LE++NQ+D
Sbjct: 238 KYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMD 297
Query: 301 GFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERD 360
GFD N+KV+MATNR DTLDPALL PGRLDRK+EF LPD + +F T MN +
Sbjct: 298 GFDQNVNVKVIMATNRADTLDPALLCPGRLDRKIEFPLPDRRQKRLVFSTITSKMNLSEE 357
Query: 361 IRFE 364
+ E
Sbjct: 358 VDLE 361
>WB|WBGene00004503 [details] [associations]
symbol:rpt-3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK
EMBL:FO081210 PIR:A88485 RefSeq:NP_498429.1
ProteinModelPortal:P46502 SMR:P46502 DIP:DIP-24412N IntAct:P46502
MINT:MINT-212949 STRING:P46502 PaxDb:P46502
EnsemblMetazoa:F23F12.6.1 EnsemblMetazoa:F23F12.6.2 GeneID:175925
KEGG:cel:CELE_F23F12.6 UCSC:F23F12.6.1 CTD:175925 WormBase:F23F12.6
GeneTree:ENSGT00550000074962 InParanoid:P46502 NextBio:890338
Uniprot:P46502
Length = 414
Score = 672 (241.6 bits), Expect = 4.5e-66, P = 4.5e-66
Identities = 126/238 (52%), Positives = 167/238 (70%)
Query: 127 IEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVEL 186
++ G V + + + LPP+ D S+ M+ +EKPD++Y D+GG Q +++RE VEL
Sbjct: 120 LKPGCSVALHKYSNALVDVLPPEADSSIQMLRPDEKPDISYGDIGGLDMQKQEVREAVEL 179
Query: 187 PMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEG 246
P+ H E + ++GIDPP+GVL YGPPG GKT+LA+AVA T A FIRV+GSE VQKY+GEG
Sbjct: 180 PLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAKAVAANTAASFIRVVGSEFVQKYLGEG 239
Query: 247 ARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARG 306
RMVR++F++A+ I+F DE+DAI RFD G D EVQR +LE++NQ+DGFD
Sbjct: 240 PRMVRDVFRLAKENSPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQST 299
Query: 307 NIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFE 364
N+KV+MATNR DTLDPALLRPGRLDRK+EF LPD + +F MN D+ E
Sbjct: 300 NVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTVCSRMNLSDDVDLE 357
>POMBASE|SPAC3A11.12c [details] [associations]
symbol:rpt5 "19S proteasome regulatory subunit Rpt5
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPAC3A11.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 GO:GO:0008540
OMA:GALMYGP EMBL:AB012136 PIR:T11634 RefSeq:XP_001713083.1
ProteinModelPortal:O14126 STRING:O14126 PRIDE:O14126
EnsemblFungi:SPAC3A11.12c.1 GeneID:3361462 KEGG:spo:SPAC3A11.12c
OrthoDB:EOG40VZZ2 NextBio:20811506 Uniprot:O14126
Length = 438
Score = 670 (240.9 bits), Expect = 7.4e-66, P = 7.4e-66
Identities = 148/337 (43%), Positives = 210/337 (62%)
Query: 38 IKKAEKEIKDMA-KKVNDLCGIKESDTGLAAPSQWD-LVSDKQMMQEEQPLQVARCTKII 95
IK + E + + +K L IKE+ ++ LV + + + QP +V +
Sbjct: 50 IKVMKSEFQRLTHEKSTMLEKIKENQEKISNNKMLPYLVGNVVEILDMQPDEVD-VQESA 108
Query: 96 NPNSEDSKY----VINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKID 151
N NSE ++ VI + L V P ++ G +GV+++ Y I LP + D
Sbjct: 109 NQNSEATRVGKSAVIKTSTRQTIFLPLIGLVEPEELHPGDLIGVNKDSYLIIDKLPSEYD 168
Query: 152 PSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPP 211
V M V+EKP Y+D+GG +QIE++ E + LPM +KF KLG+ PPKG L +GPP
Sbjct: 169 SRVKAMEVDEKPTERYSDIGGLSKQIEELFEAIVLPMQQADKFRKLGVKPPKGCLMFGPP 228
Query: 212 GTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVD 271
GTGKTLLARA A +++A F+++ +LVQ ++G+GA++VR+ F +A+ K I+F DE+D
Sbjct: 229 GTGKTLLARACAAQSNATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKSPAIIFIDELD 288
Query: 272 AIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLD 331
AIG RFD GD EVQRTMLE++NQLDGF + +KV+ ATNR DTLDPALLR GRLD
Sbjct: 289 AIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSDDRVKVIAATNRVDTLDPALLRSGRLD 348
Query: 332 RKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSR 368
RK+EF LP+ E+R I +IH+R M + DI +E L+R
Sbjct: 349 RKLEFPLPNEEARVGILRIHSRKMAIDDDINWEELAR 385
>ASPGD|ASPL0000036562 [details] [associations]
symbol:AN2904 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001306 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 TIGRFAMs:TIGR01242 EnsemblFungi:CADANIAT00010185
OMA:EDAYSAQ Uniprot:C8VJ79
Length = 422
Score = 665 (239.2 bits), Expect = 2.5e-65, P = 2.5e-65
Identities = 152/368 (41%), Positives = 218/368 (59%)
Query: 5 PEDEIKDEKNPRPLDE-DDIALLKTYGL--GPYSTSIKKAEKEIKDMAKKVNDLCGIKES 61
P + PLD +I L+ G G ++KK ++ ++ + K+ + IK+
Sbjct: 9 PASVLSSYTKAAPLDTIPNIDSLEGTGADDGDEYATLKKLQRHLEYI--KLQEEY-IKDE 65
Query: 62 DTGLAAPSQWDLVSDKQMMQEEQ--PLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLG 119
L +LV ++ ++ Q PL + + + I+ N+ ++ + +VV +
Sbjct: 66 QRSLKR----ELVRAQEEIKRIQSVPLVIGQFMEAIDQNTG----IVQSSTGSNYVVRIL 117
Query: 120 DKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEK 179
+ ++ V + R+ + LPP+ D S+ M+ EKPDVTY DVGG Q ++
Sbjct: 118 STLDREKLKPSSSVALHRHSNALVDILPPEADSSIAMLGENEKPDVTYADVGGLDMQKQE 177
Query: 180 MREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELV 239
+RE VELP+ H + + ++GIDPP+GVL YGPPGTGKT+L +AVAN T A FIRV GSE V
Sbjct: 178 IREAVELPLTHFDLYKQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTTASFIRVNGSEFV 237
Query: 240 QKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQL 299
QKY+GEG RMVR++F+MAR I+F DE+DAI RFD G D EVQR +LE++NQ+
Sbjct: 238 QKYLGEGPRMVRDVFRMARENSPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQM 297
Query: 300 DGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEF-GLPDLESRTQIFKIHTRTMNCE 358
DGF+ N+KV+MATNR DTLDPALLRPGRLDRK+EF L D R IF M+
Sbjct: 298 DGFEQTSNVKVIMATNRADTLDPALLRPGRLDRKIEFPSLRDRRERRLIFSTIASKMSLS 357
Query: 359 RDIRFELL 366
++ + L
Sbjct: 358 PEVDLDSL 365
>CGD|CAL0005257 [details] [associations]
symbol:RPT2 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045732 "positive regulation
of protein catabolic process" evidence=IEA] [GO:0043171 "peptide
catabolic process" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005257 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000051 EMBL:AACQ01000050
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03062 RefSeq:XP_717718.1
RefSeq:XP_717812.1 ProteinModelPortal:Q5A7M6 STRING:Q5A7M6
GeneID:3640525 GeneID:3640683 KEGG:cal:CaO19.12895
KEGG:cal:CaO19.5440 Uniprot:Q5A7M6
Length = 465
Score = 663 (238.4 bits), Expect = 4.1e-65, P = 4.1e-65
Identities = 141/363 (38%), Positives = 219/363 (60%)
Query: 4 EPEDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDT 63
EP E K K R + + L Y + K E+ IKD + +E+
Sbjct: 29 EPPVESKFGKKKRRGPDTAVKLPSVYPNTRCKLKLLKLER-IKDHLLLEEEFVTNQEA-- 85
Query: 64 GLAAPSQWDLVSDKQMMQEEQ--PLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDK 121
P++ +++ + E + P+ + +II +D +++ +++ V +
Sbjct: 86 --FQPTEARQAEEREKVDELRGYPMAIGTLEEII----DDDHAIVSSTASSEYYVSIMSF 139
Query: 122 VSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMR 181
V +E G V + + L DP V++M +++ P +Y D+GG + QI++++
Sbjct: 140 VDKGLLEPGCSVLLHHKTVAVVGVLQDDADPMVSVMKLDKSPTESYADIGGLESQIQEIK 199
Query: 182 EVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQK 241
E VELP+ HPE + ++GI PPKGV+ YG PGTGKTLLA+AVAN+T A F+R++GSEL+QK
Sbjct: 200 ESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQK 259
Query: 242 YVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDG 301
Y+G+G R+ R++FQ+A IVF DE+DAIG R++ GG+ E+QRTMLE++NQLDG
Sbjct: 260 YLGDGPRLCRQIFQIAADHAPSIVFIDEIDAIGTKRYESTSGGEREIQRTMLELLNQLDG 319
Query: 302 FDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDI 361
FD RG+IKV+MATN+ ++LDPAL+RPGR+DRK+ F PD ++ +I IHT M+ D+
Sbjct: 320 FDDRGDIKVIMATNKIESLDPALIRPGRIDRKILFENPDANTKKKILTIHTSKMSLADDV 379
Query: 362 RFE 364
+
Sbjct: 380 NLD 382
>WB|WBGene00015688 [details] [associations]
symbol:C10G11.8 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 HSSP:Q9LCZ4 EMBL:FO080499 PIR:D87802
RefSeq:NP_491811.1 ProteinModelPortal:P91025 SMR:P91025
STRING:P91025 PaxDb:P91025 EnsemblMetazoa:C10G11.8 GeneID:172324
KEGG:cel:CELE_C10G11.8 UCSC:C10G11.8 CTD:172324 WormBase:C10G11.8
InParanoid:P91025 OMA:RGIENAN NextBio:875027 Uniprot:P91025
Length = 438
Score = 663 (238.4 bits), Expect = 4.1e-65, P = 4.1e-65
Identities = 122/219 (55%), Positives = 167/219 (76%)
Query: 146 LPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGV 205
L KID + VE+ P T++D+GGC+ QI++++E VELP+ HPE + ++GI PKGV
Sbjct: 161 LDDKIDSNAMGHKVEKTPKETFDDIGGCESQIQELKESVELPLTHPEYYEEMGITAPKGV 220
Query: 206 LCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIV 265
+ YG PGTGKTLLA+AVAN T A FIR GS+LVQK GEGAR+VR++FQMA+ + IV
Sbjct: 221 ILYGEPGTGKTLLAKAVANSTSATFIRATGSDLVQKQSGEGARLVRQIFQMAKEQAPSIV 280
Query: 266 FFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALL 325
F DE+DA+G RFD G+ EVQRT+LE++NQLDGF++RG++K++MATNR D+LDPAL+
Sbjct: 281 FIDEIDAVGTKRFDTSSRGEQEVQRTLLELLNQLDGFESRGDVKIIMATNRIDSLDPALI 340
Query: 326 RPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFE 364
RPGR+DRK+E PD ++R +IF IHT M ++ + +E
Sbjct: 341 RPGRIDRKIELPKPDEKTRQKIFTIHTSGMTIQKAVTYE 379
>FB|FBgn0028684 [details] [associations]
symbol:Rpt5 "Regulatory particle triple-A ATPase 5"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS;IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005937 Pfam:PF00004 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 HSSP:Q01853 TIGRFAMs:TIGR01242 GO:GO:0008540
ChiTaRS:PSMC3 FlyBase:FBgn0028684 EMBL:AF134402
ProteinModelPortal:Q9XZC3 STRING:Q9XZC3 PRIDE:Q9XZC3
InParanoid:Q9XZC3 ArrayExpress:Q9XZC3 Bgee:Q9XZC3 Uniprot:Q9XZC3
Length = 431
Score = 658 (236.7 bits), Expect = 1.4e-64, P = 1.4e-64
Identities = 134/263 (50%), Positives = 181/263 (68%)
Query: 115 VVGLGD--KVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGG 172
V+GL D K+ P D+ GV+++ Y I LP + D V M V+E+P ++D+GG
Sbjct: 129 VIGLVDAEKLKPGDL-----AGVNKDFYLILETLPAEYDARVKAMEVDERPTEQFSDIGG 183
Query: 173 CKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIR 232
+QI+++ E V LPM H EKF LGI PPKGV+ YGPPGTGKTLLARA A +T + F++
Sbjct: 184 LDKQIQELIEAVVLPMTHKEKFKNLGIHPPKGVILYGPPGTGKTLLARACAAQTKSTFLK 243
Query: 233 VIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTM 292
+ G +LVQ ++G+GA++VR+ F +A+ K I+F DE+DAIG RFD GD EVQRTM
Sbjct: 244 LAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTM 303
Query: 293 LEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHT 352
LE++NQL+GF + +IKV+ ATNR D L PALLR GRLDRK+EF P+ E+R +I +IH+
Sbjct: 304 LELLNQLNGFSSTADIKVIAATNRVDIL-PALLRSGRLDRKIEFPHPNEEARARIMQIHS 362
Query: 353 RTMNCERDIRFELLSRLCPNSTG 375
R MN D+ FE LSR + G
Sbjct: 363 RKMNVSNDVNFEELSRSTDDFNG 385
>CGD|CAL0002261 [details] [associations]
symbol:RPT5 species:5476 "Candida albicans" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0002261 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000086 EMBL:AACQ01000085 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 RefSeq:XP_715432.1 RefSeq:XP_715502.1
ProteinModelPortal:Q5A0X3 STRING:Q5A0X3 GeneID:3642858
GeneID:3642911 KEGG:cal:CaO19.10635 KEGG:cal:CaO19.3123
Uniprot:Q5A0X3
Length = 454
Score = 656 (236.0 bits), Expect = 2.3e-64, P = 2.3e-64
Identities = 130/257 (50%), Positives = 177/257 (68%)
Query: 115 VVGLGD--KVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGG 172
++GL D K+ P D+ +GV+++ Y + LP + D V M V+EKP Y+D+GG
Sbjct: 150 MIGLVDPSKLKPNDL-----IGVNKDSYLVLDTLPSEYDSRVKAMEVDEKPTEDYSDIGG 204
Query: 173 CKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIR 232
+QIE++ E V LPM +KF LGI PPKG L YGPPGTGKTLLARA A ++ A F++
Sbjct: 205 LDKQIEELIEAVVLPMKQADKFKNLGIKPPKGALMYGPPGTGKTLLARACAAQSGATFLK 264
Query: 233 VIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTM 292
+ +LVQ ++G+GA++VR+ F +A+ K I+F DE+DAIG RFD GD EVQRTM
Sbjct: 265 LAAPQLVQMFIGDGAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDSDKSGDREVQRTM 324
Query: 293 LEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHT 352
LE++NQLDGF + +KVL ATNR DTLDPALLR GRLDRK+EF LP E+R + KIH
Sbjct: 325 LELLNQLDGFGSDDRVKVLAATNRVDTLDPALLRSGRLDRKIEFPLPSEEARESVLKIHA 384
Query: 353 RTMNCERD-IRFELLSR 368
R ++C+ + + + L+R
Sbjct: 385 RKLHCDNNSVNWRELAR 401
>UNIPROTKB|F1MWE0 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:DAAA02041602 IPI:IPI00701790
UniGene:Bt.49089 Ensembl:ENSBTAT00000028983 NextBio:20868523
Uniprot:F1MWE0
Length = 456
Score = 654 (235.3 bits), Expect = 3.7e-64, P = 3.7e-64
Identities = 139/279 (49%), Positives = 185/279 (66%)
Query: 115 VVGLGD--KVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGG 172
V+GL D K+ P D+ VGV+++ Y I LP + D V M V+E+P Y+D+GG
Sbjct: 137 VIGLVDAEKLKPGDL-----VGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGG 191
Query: 173 CKEQIEKMRE-------------VVE---LPMLHPEKFVKLGIDPPKGVLCYGPPGTGKT 216
+QI+++RE +VE LPM H EKF LGI PPKGVL YGPPGTGKT
Sbjct: 192 LDKQIQEVREARHLTSLLCLSASLVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKT 251
Query: 217 LLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGA 276
LLARA A +T A F+++ G +LVQ ++G+GA++VR+ F +A+ K I+F DE+DAIG
Sbjct: 252 LLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTK 311
Query: 277 RFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEF 336
RFD GD EVQRTMLE++NQLDGF +KV+ ATNR D LDPALLR GRLDRK+EF
Sbjct: 312 RFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEF 371
Query: 337 GLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
+P+ E+R +I +IH+R MN D+ +E L+R + G
Sbjct: 372 PMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNG 410
>ASPGD|ASPL0000010049 [details] [associations]
symbol:AN4236 species:162425 "Emericella nidulans"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:BN001302 GO:GO:0030163
GO:GO:0017111 EMBL:AACD01000068 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP OrthoDB:EOG40VZZ2
RefSeq:XP_661840.1 ProteinModelPortal:Q5B5E4 STRING:Q5B5E4
EnsemblFungi:CADANIAT00004422 GeneID:2873654 KEGG:ani:AN4236.2
Uniprot:Q5B5E4
Length = 465
Score = 646 (232.5 bits), Expect = 2.6e-63, P = 2.6e-63
Identities = 131/256 (51%), Positives = 174/256 (67%)
Query: 115 VVGLGD--KVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGG 172
++GL D K+ P D+ +GV+++ Y I LP + D V M V+EKP Y D+GG
Sbjct: 161 LIGLVDHEKLKPGDL-----IGVNKDSYLILDTLPAEYDNRVKAMEVDEKPTEKYTDIGG 215
Query: 173 CKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIR 232
+QIE++ E + PM E+F KLGI PKG L YGPPGTGKTLLARA A T+A F++
Sbjct: 216 LDKQIEEIVEAIVWPMKEAERFKKLGIKAPKGALMYGPPGTGKTLLARACAAETNATFLK 275
Query: 233 VIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTM 292
+ G +LVQ ++G+GA++VR+ F +A+ K I+F DE+DA+G RFD GD EVQRTM
Sbjct: 276 LAGPQLVQMFIGDGAKLVRDCFALAKEKAPSIIFIDELDAVGTKRFDSEKSGDREVQRTM 335
Query: 293 LEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHT 352
LE++NQLDGF + IKVL ATNR D LDPALLR GRLDRK+EF LP+ E+R I +IH+
Sbjct: 336 LELLNQLDGFASDDRIKVLAATNRVDVLDPALLRSGRLDRKIEFPLPNEEARANILQIHS 395
Query: 353 RTMNCERDIRFELLSR 368
R M E + + L+R
Sbjct: 396 RKMTVEDSVNWAELAR 411
>POMBASE|SPBC4.07c [details] [associations]
symbol:rpt2 "19S proteasome regulatory subunit Rpt2"
species:4896 "Schizosaccharomyces pombe" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IGI] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC4.07c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0007346
GO:GO:0043161 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0016887
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03062 OMA:FIRNQER EMBL:Z29366 PIR:S39348
RefSeq:NP_595480.1 ProteinModelPortal:P36612 IntAct:P36612
STRING:P36612 PRIDE:P36612 EnsemblFungi:SPBC4.07c.1 GeneID:2540939
KEGG:spo:SPBC4.07c OrthoDB:EOG4FN7S6 NextBio:20802054
Uniprot:P36612
Length = 448
Score = 646 (232.5 bits), Expect = 2.6e-63, P = 2.6e-63
Identities = 131/283 (46%), Positives = 185/283 (65%)
Query: 85 PLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQI 144
P+ V +II +D +++ ++ V + V +E G V + I
Sbjct: 113 PMSVGTLEEII----DDDHAIVSTAG-PEYYVSIMSFVDKDMLEPGCSVLLHHKAMSIVG 167
Query: 145 PLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKG 204
L DP + +M +++ P +Y D+GG + QI++++E VELP+ HPE + ++GI PPKG
Sbjct: 168 LLLDDTDPMINVMKLDKAPTESYADIGGLESQIQEIKEAVELPLTHPELYEEMGIKPPKG 227
Query: 205 VLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACI 264
V+ YG PGTGKTLLA+AVAN+T A F+RV+GSEL+QKY+G+G R+VR+LF A I
Sbjct: 228 VILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPRLVRQLFNAAEEHSPSI 287
Query: 265 VFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFD-ARGNIKVLMATNRPDTLDPA 323
VF DE+DAIG R+D G + E+QRTMLE++NQLDGFD ++ +IKV+MATNR LDPA
Sbjct: 288 VFIDEIDAIGTKRYDAQSGAEREIQRTMLELLNQLDGFDTSQRDIKVIMATNRISDLDPA 347
Query: 324 LLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELL 366
L+RPGR+DRK+ F PD ++ +IF IHT MN D+ E L
Sbjct: 348 LIRPGRIDRKILFENPDEATKRKIFTIHTSKMNLGEDVNLEEL 390
>POMBASE|SPCC576.10c [details] [associations]
symbol:rpt3 "19S proteasome regulatory subunit Rpt3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005524
"ATP binding" evidence=IC] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0004175 "endopeptidase activity" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC576.10c GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0016887 GO:GO:0006511
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03063 OMA:DQTTNVK PIR:T41420 RefSeq:NP_588437.1
ProteinModelPortal:O74894 SMR:O74894 STRING:O74894 PRIDE:O74894
EnsemblFungi:SPCC576.10c.1 GeneID:2539539 KEGG:spo:SPCC576.10c
OrthoDB:EOG46HKKC NextBio:20800700 Uniprot:O74894
Length = 389
Score = 643 (231.4 bits), Expect = 5.4e-63, P = 5.4e-63
Identities = 129/272 (47%), Positives = 180/272 (66%)
Query: 85 PLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQI 144
PL + + + I+ N+ ++ + +VV + + ++ V + R+ +
Sbjct: 55 PLVIGQFLEAIDQNTA----IVGSTTGSNYVVRILSTLDRELLKPSASVALQRHSNALVD 110
Query: 145 PLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKG 204
LPP+ D S++M+ +E+PDV+Y DVGG Q +++RE VELP+ + + ++GIDPP+G
Sbjct: 111 ILPPEADSSISMLRPDERPDVSYADVGGLDVQKQEVREAVELPLTQGDLYRQIGIDPPRG 170
Query: 205 VLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACI 264
VL YGPPGTGKT+L +AVAN T A FIRV+GSE VQKY+GEG RMVR++F+MAR I
Sbjct: 171 VLLYGPPGTGKTMLVKAVANSTAANFIRVVGSEFVQKYLGEGPRMVRDVFRMARENAPAI 230
Query: 265 VFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPAL 324
+F DE+DAI RFD G D EVQR ++E++ Q+DGFD N+KV+MATNR DTLDPAL
Sbjct: 231 IFIDEIDAIATKRFDAQTGADREVQRILIELLTQMDGFDQGANVKVIMATNRADTLDPAL 290
Query: 325 LRPGRLDRKVEF-GLPDLESRTQIFKIHTRTM 355
LRPGRLDRK+EF D R +F+ T M
Sbjct: 291 LRPGRLDRKIEFPSYRDRRQRRLVFQTITAKM 322
>CGD|CAL0001552 [details] [associations]
symbol:PR26 species:5476 "Candida albicans" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0001552 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 638 (229.6 bits), Expect = 1.8e-62, P = 1.8e-62
Identities = 138/314 (43%), Positives = 200/314 (63%)
Query: 38 IKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQ--EEQPLQVARCTKII 95
+KK EKE+ D+ + IK+ L +LV ++ ++ + PL + + + I
Sbjct: 34 LKKLEKEL-DLLLLQEEY--IKDEQRHLKR----ELVRAQEEVKRIKSVPLVIGQFLEPI 86
Query: 96 NPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVT 155
+ N+ +++ + +VV + + ++ V + R+ + LPP+ D S++
Sbjct: 87 DENTG----IVSSTTGSNYVVRILSTLDRELLKASSSVALHRHSNALVDILPPEADSSIS 142
Query: 156 MMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGK 215
++ ++KPDVTY DVGG Q ++++E VELP+ + + ++GIDPP+GVL YGPPGTGK
Sbjct: 143 IVGEDQKPDVTYADVGGLDMQKQEIKEAVELPLTQGDLYSQIGIDPPRGVLLYGPPGTGK 202
Query: 216 TLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGG 275
T+L +AVAN T A FIR+ GSE VQKY+GEG RMVR++F++AR I+F DE+DAI
Sbjct: 203 TMLVKAVANSTTASFIRINGSEFVQKYLGEGPRMVRDVFRLARENSPAIIFIDEIDAIAT 262
Query: 276 ARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVE 335
RFD G D EVQR +LE++NQ+DGFD +KV+MATNR DTLDPALLRPGRLDRK+E
Sbjct: 263 KRFDAQTGADREVQRILLELLNQMDGFDQTSTVKVIMATNRADTLDPALLRPGRLDRKIE 322
Query: 336 F-GLPDLESRTQIF 348
F L D R IF
Sbjct: 323 FPSLKDRRERRLIF 336
>UNIPROTKB|Q5A0L8 [details] [associations]
symbol:PR26 "Likely 26S proteasome regulatory particle
ATPase Rpt3p" species:237561 "Candida albicans SC5314" [GO:0005838
"proteasome regulatory particle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0001552
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 638 (229.6 bits), Expect = 1.8e-62, P = 1.8e-62
Identities = 138/314 (43%), Positives = 200/314 (63%)
Query: 38 IKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQ--EEQPLQVARCTKII 95
+KK EKE+ D+ + IK+ L +LV ++ ++ + PL + + + I
Sbjct: 34 LKKLEKEL-DLLLLQEEY--IKDEQRHLKR----ELVRAQEEVKRIKSVPLVIGQFLEPI 86
Query: 96 NPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVT 155
+ N+ +++ + +VV + + ++ V + R+ + LPP+ D S++
Sbjct: 87 DENTG----IVSSTTGSNYVVRILSTLDRELLKASSSVALHRHSNALVDILPPEADSSIS 142
Query: 156 MMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGK 215
++ ++KPDVTY DVGG Q ++++E VELP+ + + ++GIDPP+GVL YGPPGTGK
Sbjct: 143 IVGEDQKPDVTYADVGGLDMQKQEIKEAVELPLTQGDLYSQIGIDPPRGVLLYGPPGTGK 202
Query: 216 TLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGG 275
T+L +AVAN T A FIR+ GSE VQKY+GEG RMVR++F++AR I+F DE+DAI
Sbjct: 203 TMLVKAVANSTTASFIRINGSEFVQKYLGEGPRMVRDVFRLARENSPAIIFIDEIDAIAT 262
Query: 276 ARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVE 335
RFD G D EVQR +LE++NQ+DGFD +KV+MATNR DTLDPALLRPGRLDRK+E
Sbjct: 263 KRFDAQTGADREVQRILLELLNQMDGFDQTSTVKVIMATNRADTLDPALLRPGRLDRKIE 322
Query: 336 F-GLPDLESRTQIF 348
F L D R IF
Sbjct: 323 FPSLKDRRERRLIF 336
>SGD|S000002802 [details] [associations]
symbol:RPT3 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002802 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0006511 GO:GO:0017111 GO:GO:0045899 EMBL:U32274
KO:K07101 RefSeq:NP_010687.3 GeneID:852008 KEGG:sce:YDR399W
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 OrthoDB:EOG46HKKC
EMBL:X73570 EMBL:U06229 PIR:S69678 RefSeq:NP_010682.3 PDB:2DZN
PDB:2DZO PDBsum:2DZN PDBsum:2DZO ProteinModelPortal:P33298
SMR:P33298 DIP:DIP-1587N IntAct:P33298 MINT:MINT-383865
STRING:P33298 PaxDb:P33298 PeptideAtlas:P33298 EnsemblFungi:YDR394W
GeneID:852003 KEGG:sce:YDR394W EvolutionaryTrace:P33298
NextBio:970192 Genevestigator:P33298 GermOnline:YDR394W
Uniprot:P33298
Length = 428
Score = 636 (228.9 bits), Expect = 3.0e-62, P = 3.0e-62
Identities = 128/257 (49%), Positives = 174/257 (67%)
Query: 93 KIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDP 152
+ + P +++ V + ++ +VV + + ++ M V + R+ + LPP D
Sbjct: 98 QFLEPIDQNTGIVSSTTGMS-YVVRILSTLDRELLKPSMSVALHRHSNALVDILPPDSDS 156
Query: 153 SVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPG 212
S+++M EKPDVTY DVGG Q +++RE VELP++ + + ++GIDPP+GVL YGPPG
Sbjct: 157 SISVMGENEKPDVTYADVGGLDMQKQEIREAVELPLVQADLYEQIGIDPPRGVLLYGPPG 216
Query: 213 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDA 272
TGKT+L +AVAN T A FIRV GSE V KY+GEG RMVR++F++AR I+F DEVD+
Sbjct: 217 TGKTMLVKAVANSTKAAFIRVNGSEFVHKYLGEGPRMVRDVFRLARENAPSIIFIDEVDS 276
Query: 273 IGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDR 332
I RFD G D EVQR ++E++ Q+DGFD N+KV+MATNR DTLDPALLRPGRLDR
Sbjct: 277 IATKRFDAQTGSDREVQRILIELLTQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDR 336
Query: 333 KVEF-GLPDLESRTQIF 348
K+EF L D R IF
Sbjct: 337 KIEFPSLRDRRERRLIF 353
>UNIPROTKB|E2RM61 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 GeneTree:ENSGT00550000074947
EMBL:AAEX03006359 ProteinModelPortal:E2RM61 PRIDE:E2RM61
Ensembl:ENSCAFT00000020231 OMA:DSNCELQ NextBio:20855489
Uniprot:E2RM61
Length = 251
Score = 608 (219.1 bits), Expect = 2.7e-59, P = 2.7e-59
Identities = 122/239 (51%), Positives = 163/239 (68%)
Query: 73 LVSDKQMMQEEQPLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMR 132
L+ ++ + +EQ V + + + K ++ V KFVV + + D+ R
Sbjct: 9 LLREELQLLQEQGSYVGEVVRAM----DKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCR 64
Query: 133 VGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPE 192
V + + Y + LP K+DP V++M VE+ PD TY +GG +QI++++EV+ELP+ HPE
Sbjct: 65 VALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPE 124
Query: 193 KFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRE 252
F LGI PKGVL YGPPGTGKTLLARAVA+ TD FIRV GSELVQK++GEGARMVRE
Sbjct: 125 LFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRE 184
Query: 253 LFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVL 311
LF MAR I+F DE+D+IG +R + G GGD+EVQRTMLE++NQLDGF+A NIKV+
Sbjct: 185 LFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVM 243
>UNIPROTKB|F1LZ09 [details] [associations]
symbol:F1LZ09 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR005937 Pfam:PF00004 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00780208
Ensembl:ENSRNOT00000039743 Uniprot:F1LZ09
Length = 369
Score = 581 (209.6 bits), Expect = 2.0e-56, P = 2.0e-56
Identities = 109/219 (49%), Positives = 149/219 (68%)
Query: 146 LPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGV 205
LPP+ + S+ M+T ++KP+V Y D+G Q +++ E +ELP+ H E + ++GIDPP+GV
Sbjct: 92 LPPEAESSIMMLTSDQKPNVIYADIGSMDIQKQEVWEAMELPLTHFELYKQIGIDPPRGV 151
Query: 206 LCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIV 265
L YGPPG GKT+LA+ VA+ A FI V+GSE V KY+GEG R++ ++F + + I+
Sbjct: 152 LMYGPPGCGKTMLAKTVAHHMIAAFIHVVGSEFVHKYLGEGPRIIWDVFHLDKENAPAII 211
Query: 266 FFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALL 325
F DE+DAI RFD G D EVQR +LE++NQ+DGFD ++K +MATNR DTLDP LL
Sbjct: 212 FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNISVKAIMATNRKDTLDPTLL 271
Query: 326 RPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFE 364
RPG LD K+EF LPD R IF T MN ++ E
Sbjct: 272 RPGHLDHKIEFPLPDHRKRL-IFSTITSKMNLSEEVNVE 309
>UNIPROTKB|J9NWB0 [details] [associations]
symbol:J9NWB0 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005937 Pfam:PF00004 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074818 EMBL:AAEX03014432
Ensembl:ENSCAFT00000039483 OMA:AGSELIQ Uniprot:J9NWB0
Length = 436
Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
Identities = 122/270 (45%), Positives = 172/270 (63%)
Query: 101 DSKYVINVKQI-AKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTV 159
D +VI + ++ V + V +E G ++ + + + DP VT+M V
Sbjct: 117 DGNHVIVSTSVGSEHYVSILSFVDKDLLEPGCSNLLNHKLHAVIVVFMDDTDPLVTVMKV 176
Query: 160 E--EK-PDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKT 216
E EK P TY D+ G QI++++E +ELP+ HPE + ++GI PPKGV+ YGPPGT K
Sbjct: 177 EKVEKAPQETYADIRGLDNQIQEIKESLELPLTHPENYEEMGIKPPKGVILYGPPGTVK- 235
Query: 217 LLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGA 276
AVANRT A F+RV GSEL+QKY+G+G ++VRE F++A IVF DE+DAIG
Sbjct: 236 ----AVANRTSATFLRVAGSELIQKYLGDGPKVVRESFRVAEEHAPSIVFIDEIDAIGTR 291
Query: 277 RFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEF 336
R+D GG+ E+QRTMLE++NQLDGFD+RG++KV+MATNR TLDPAL L ++
Sbjct: 292 RYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIKTLDPALSHQAALTGRLS- 350
Query: 337 GLPDLESRTQIFKIHTRTMNCERDIRFELL 366
LPD +++ IF+IHT M D+ +L+
Sbjct: 351 PLPDEKTKKHIFQIHTSRMTLADDVTLDLI 380
>UNIPROTKB|J3QQM1 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:AC015651 ChiTaRS:PSMC5
HGNC:HGNC:9552 Ensembl:ENST00000582130 Uniprot:J3QQM1
Length = 263
Score = 546 (197.3 bits), Expect = 1.0e-52, P = 1.0e-52
Identities = 107/191 (56%), Positives = 137/191 (71%)
Query: 111 IAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDV 170
+ + V + K + RV + + Y + LP K+DP V++M VE+ PD TY +
Sbjct: 73 VGEVVRAMDKKKVLVKVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMI 132
Query: 171 GGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACF 230
GG +QI++++EV+ELP+ HPE F LGI PKGVL YGPPGTGKTLLARAVA+ TD F
Sbjct: 133 GGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTF 192
Query: 231 IRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQR 290
IRV GSELVQK++GEGARMVRELF MAR I+F DE+D+IG +R + G GGD+EVQR
Sbjct: 193 IRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQR 252
Query: 291 TMLEIVNQLDG 301
TMLE++NQLDG
Sbjct: 253 TMLELLNQLDG 263
>UNIPROTKB|E9PKD5 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 EMBL:AC090559 HGNC:HGNC:9549 ChiTaRS:PSMC3
IPI:IPI00978735 ProteinModelPortal:E9PKD5 SMR:E9PKD5 PRIDE:E9PKD5
Ensembl:ENST00000524447 ArrayExpress:E9PKD5 Bgee:E9PKD5
Uniprot:E9PKD5
Length = 294
Score = 485 (175.8 bits), Expect = 2.3e-50, Sum P(2) = 2.3e-50
Identities = 93/151 (61%), Positives = 113/151 (74%)
Query: 182 EVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQK 241
E + LPM H EKF LGI PPKGVL YGPPGTGKTLLARA A +T A F+++ G +LVQ
Sbjct: 144 EAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQM 203
Query: 242 YVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDG 301
++G+GA++VR+ F +A+ K I+F DE+DAIG RFD GD EVQRTMLE++NQLDG
Sbjct: 204 FIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDG 263
Query: 302 FDARGNIKVLMATNRPDTLDPALLRPGRLDR 332
F +KV+ ATNR D LDPALLR GRLDR
Sbjct: 264 FQPNTQVKVIAATNRVDILDPALLRSGRLDR 294
Score = 56 (24.8 bits), Expect = 2.3e-50, Sum P(2) = 2.3e-50
Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 115 VVGLGD--KVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEE 161
V+GL D K+ P D+ VGV+++ Y I LP + D V M + E
Sbjct: 101 VIGLVDAEKLKPGDL-----VGVNKDSYLILETLPTEYDSRVKAMELVE 144
>DICTYBASE|DDB_G0288065 [details] [associations]
symbol:cdcD "CDC48 family AAA ATPase" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0009617 "response to bacterium" evidence=IEP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0007049 "cell
cycle" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0051301 "cell division" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
dictyBase:DDB_G0288065 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005615 GO:GO:0045335 GO:GO:0009617 GO:GO:0051301
GenomeReviews:CM000154_GR GO:GO:0016887 GO:GO:0007049 GO:GO:0030433
HSSP:Q01853 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AAFI02000109 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
ProtClustDB:CLSZ2429060 EMBL:U83085 RefSeq:XP_636910.1
ProteinModelPortal:P90532 SMR:P90532 STRING:P90532 PRIDE:P90532
EnsemblProtists:DDB0191154 GeneID:8626465 KEGG:ddi:DDB_G0288065
InParanoid:P90532 Uniprot:P90532
Length = 793
Score = 496 (179.7 bits), Expect = 3.7e-49, Sum P(2) = 3.7e-49
Identities = 110/265 (41%), Positives = 154/265 (58%)
Query: 115 VVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCK 174
V+ L D+ +I E M V D ++ + L +PS TV E P T+ D+GG +
Sbjct: 427 VIDLEDETISAEILESMSVTQDH--FRTALTLS---NPSALRETVVEVPTTTWEDIGGLE 481
Query: 175 EQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVI 234
++RE V+ P+ HPEKF K G+ P KGVL YGPPG GKTLLA+A+AN A FI +
Sbjct: 482 GVKRELRETVQYPVEHPEKFRKFGMQPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK 541
Query: 235 GSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAI----GGARFDDGVGGDNEVQR 290
G EL+ + GE VRELF AR C++FFDE+D+I G ++ D G GD R
Sbjct: 542 GPELLTMWFGESEANVRELFDKARQAAPCVLFFDELDSIARSRGSSQGDAGGAGD----R 597
Query: 291 TMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKI 350
+ +I+ ++DG +A+ N+ ++ ATNRPD +DPA+LRPGRLD+ + LPDL SR I K
Sbjct: 598 VINQILTEMDGMNAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDLPSRVAILKA 657
Query: 351 HTRTMNCERDIRFELLSRLCPNSTG 375
+D+ E L + +G
Sbjct: 658 CLNKSPVAKDVDLEFLGQKTQGFSG 682
Score = 451 (163.8 bits), Expect = 4.5e-44, Sum P(2) = 4.5e-44
Identities = 85/209 (40%), Positives = 137/209 (65%)
Query: 160 EEKPD-VTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLL 218
E++ D V Y+D+GG ++Q+ ++RE+VELP+ HP+ F +G+ PPKG+L YGPPG GKT++
Sbjct: 193 EDRLDEVGYDDIGGVRKQLGQIRELVELPLRHPQLFKNIGVKPPKGILLYGPPGCGKTMI 252
Query: 219 ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARF 278
ARAVAN T A F + G E++ K GE +R+ F+ A I+F DE+D+I R
Sbjct: 253 ARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR- 311
Query: 279 DDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGL 338
+ G+ E +R + +++ +DG +R ++ V+ ATNRP+++DPAL R GR DR+++ +
Sbjct: 312 -EKTQGEVE-RRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDITI 369
Query: 339 PDLESRTQIFKIHTRTMNCERDIRFELLS 367
PD R +I +IHT+ M + + E ++
Sbjct: 370 PDATGRLEIMRIHTKNMKLDETVDLEAVA 398
Score = 44 (20.5 bits), Expect = 3.7e-49, Sum P(2) = 3.7e-49
Identities = 14/48 (29%), Positives = 23/48 (47%)
Query: 91 CTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSP---TDIEEGMRVGV 135
C + +P + SK +N V LGD +S +D++ G R+ V
Sbjct: 68 CIVLSDPTIDPSKIRMNKVVRNNLRVRLGDMISVHQCSDVKYGKRIHV 115
>UNIPROTKB|J3QSA9 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0017025 "TBP-class protein binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031595 "nuclear proteasome complex"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 GO:GO:0017111
EMBL:AC015651 ChiTaRS:PSMC5 HGNC:HGNC:9552 Ensembl:ENST00000585123
Uniprot:J3QSA9
Length = 257
Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
Identities = 102/212 (48%), Positives = 138/212 (65%)
Query: 73 LVSDKQMMQEEQPLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMR 132
L+ ++ + +EQ V + + + K ++ V KFVV + + D+ R
Sbjct: 50 LLREELQLLQEQGSYVGEVVRAM----DKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCR 105
Query: 133 VGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPE 192
V + + Y + LP K+DP V++M VE+ PD TY +GG +QI++++EV+ELP+ HPE
Sbjct: 106 VALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPE 165
Query: 193 KFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRE 252
F LGI PKGVL YGPPGTGKTLLARAVA+ TD FIRV GSELVQK++GEGARMVRE
Sbjct: 166 LFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRE 225
Query: 253 LFQMARSKKACIVFFDEVDAIGGARFDDGVGG 284
LF MAR I+F DE+D+IG +R + G GG
Sbjct: 226 LFVMAREHAPSIIFMDEIDSIGSSRLEGGSGG 257
>CGD|CAL0000732 [details] [associations]
symbol:CDC48 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0000837 "Doa10p ubiquitin
ligase complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051228 "mitotic spindle
disassembly" evidence=IEA] [GO:0016320 "endoplasmic reticulum
membrane fusion" evidence=IEA] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 506 (183.2 bits), Expect = 7.4e-48, P = 7.4e-48
Identities = 94/204 (46%), Positives = 138/204 (67%)
Query: 164 DVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVA 223
+V Y+D+GGCK+Q+ ++RE+VELP+ HP+ F +GI PPKG+L YGPPGTGKT++ARAVA
Sbjct: 211 EVGYDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVA 270
Query: 224 NRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVG 283
N T A F + G E++ K GE +R+ F+ A I+F DE+D+I R D
Sbjct: 271 NETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKR--DKTN 328
Query: 284 GDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLES 343
G+ E +R + +++ +DG AR N+ V+ ATNRP+++DPAL R GR DR+V+ G+PD E
Sbjct: 329 GEVE-RRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGVPDAEG 387
Query: 344 RTQIFKIHTRTMNCERDIRFELLS 367
R +I +IHT+ M D+ E ++
Sbjct: 388 RLEILRIHTKNMKLADDVDLEAIA 411
Score = 449 (163.1 bits), Expect = 1.3e-41, P = 1.3e-41
Identities = 97/263 (36%), Positives = 154/263 (58%)
Query: 115 VVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCK 174
++ L ++ T++ + GV ++ ++ + +PS TV E +VT++D+GG
Sbjct: 440 LIDLEEETIDTEVLNSL--GVTQDNFRFALG---NSNPSALRETVVENVNVTWDDIGGLD 494
Query: 175 EQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVI 234
+++E VE P+LHP+++ K G+ P KGVL +GPPGTGKTLLA+AVA A FI V
Sbjct: 495 NIKNELKETVEYPVLHPDQYQKFGLAPTKGVLFFGPPGTGKTLLAKAVATEVSANFISVK 554
Query: 235 GSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGD--NEVQRTM 292
G EL+ + GE +R++F AR+ +VF DE+D+I AR G GD R +
Sbjct: 555 GPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKAR--GGSHGDAGGASDRVV 612
Query: 293 LEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHT 352
+++ ++DG +A+ N+ V+ ATNRPD +DPALLRPGRLD+ + LPD +R I +
Sbjct: 613 NQLLTEMDGMNAKKNVFVIGATNRPDQIDPALLRPGRLDQLIYVPLPDEPARLSILQAQL 672
Query: 353 RTMNCERDIRFELLSRLCPNSTG 375
R E + ++++ +G
Sbjct: 673 RNTPLEPGLDLNEIAKITHGFSG 695
>UNIPROTKB|Q59WG3 [details] [associations]
symbol:CDC48 "Putative uncharacterized protein CDC48"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 506 (183.2 bits), Expect = 7.4e-48, P = 7.4e-48
Identities = 94/204 (46%), Positives = 138/204 (67%)
Query: 164 DVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVA 223
+V Y+D+GGCK+Q+ ++RE+VELP+ HP+ F +GI PPKG+L YGPPGTGKT++ARAVA
Sbjct: 211 EVGYDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVA 270
Query: 224 NRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVG 283
N T A F + G E++ K GE +R+ F+ A I+F DE+D+I R D
Sbjct: 271 NETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKR--DKTN 328
Query: 284 GDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLES 343
G+ E +R + +++ +DG AR N+ V+ ATNRP+++DPAL R GR DR+V+ G+PD E
Sbjct: 329 GEVE-RRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGVPDAEG 387
Query: 344 RTQIFKIHTRTMNCERDIRFELLS 367
R +I +IHT+ M D+ E ++
Sbjct: 388 RLEILRIHTKNMKLADDVDLEAIA 411
Score = 449 (163.1 bits), Expect = 1.3e-41, P = 1.3e-41
Identities = 97/263 (36%), Positives = 154/263 (58%)
Query: 115 VVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCK 174
++ L ++ T++ + GV ++ ++ + +PS TV E +VT++D+GG
Sbjct: 440 LIDLEEETIDTEVLNSL--GVTQDNFRFALG---NSNPSALRETVVENVNVTWDDIGGLD 494
Query: 175 EQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVI 234
+++E VE P+LHP+++ K G+ P KGVL +GPPGTGKTLLA+AVA A FI V
Sbjct: 495 NIKNELKETVEYPVLHPDQYQKFGLAPTKGVLFFGPPGTGKTLLAKAVATEVSANFISVK 554
Query: 235 GSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGD--NEVQRTM 292
G EL+ + GE +R++F AR+ +VF DE+D+I AR G GD R +
Sbjct: 555 GPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKAR--GGSHGDAGGASDRVV 612
Query: 293 LEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHT 352
+++ ++DG +A+ N+ V+ ATNRPD +DPALLRPGRLD+ + LPD +R I +
Sbjct: 613 NQLLTEMDGMNAKKNVFVIGATNRPDQIDPALLRPGRLDQLIYVPLPDEPARLSILQAQL 672
Query: 353 RTMNCERDIRFELLSRLCPNSTG 375
R E + ++++ +G
Sbjct: 673 RNTPLEPGLDLNEIAKITHGFSG 695
>UNIPROTKB|H9KYT1 [details] [associations]
symbol:LOC430766 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
PANTHER:PTHR23077:SF18 GeneTree:ENSGT00700000104534
EMBL:AADN02071262 Ensembl:ENSGALT00000000527 OMA:NRRTHAK
Uniprot:H9KYT1
Length = 538
Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
Identities = 99/261 (37%), Positives = 157/261 (60%)
Query: 115 VVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCK 174
++ L D+ ++ + V +D ++ + + +PS TV E P VT+ D+GG +
Sbjct: 161 LIDLEDETIDAEVMNSLAVTMDDFRWALS-----QSNPSALRETVVEVPQVTWEDIGGLE 215
Query: 175 EQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVI 234
+ +++E+V+ P+ HP+KF+K G+ P KGVL YGPPG GKTLLA+A+AN A FI +
Sbjct: 216 DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK 275
Query: 235 GSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLE 294
G EL+ + GE VRE+F AR C++FFDE+D+I AR + G R + +
Sbjct: 276 GPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQ 335
Query: 295 IVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRT 354
I+ ++DG + N+ ++ ATNRPD +DPA+LRPGRLD+ + LPD +SR I K + R
Sbjct: 336 ILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRK 395
Query: 355 MNCERDIRFELLSRLCPNSTG 375
+D+ + L+++ +G
Sbjct: 396 SPVAKDVDLDFLAKMTNGFSG 416
Score = 239 (89.2 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 49/130 (37%), Positives = 77/130 (59%)
Query: 235 GSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLE 294
G E++ K GE +R+ F+ A I+F DE+DAI R + G+ E +R + +
Sbjct: 3 GPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR--EKTHGEVE-RRIVSQ 59
Query: 295 IVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRT 354
++ +DG R ++ V+ ATNRP+++DPAL R GR DR+V+ G+PD R +I +IHT+
Sbjct: 60 LLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKN 119
Query: 355 MNCERDIRFE 364
M D+ E
Sbjct: 120 MKLADDVDLE 129
>UNIPROTKB|G3X757 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0070842 "aggresome assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 UniGene:Bt.49331 EMBL:DAAA02023126
ProteinModelPortal:G3X757 Ensembl:ENSBTAT00000019970 Uniprot:G3X757
Length = 806
Score = 502 (181.8 bits), Expect = 1.8e-47, P = 1.8e-47
Identities = 100/261 (38%), Positives = 157/261 (60%)
Query: 115 VVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCK 174
++ L D+ ++ + V +D ++ + + +PS TV E P VT+ D+GG +
Sbjct: 429 LIDLEDETIDAEVMNSLAVTMDDFRWALS-----QSNPSALRETVVEVPQVTWEDIGGLE 483
Query: 175 EQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVI 234
+ +++E+V+ P+ HP+KF+K G+ P KGVL YGPPG GKTLLA+A+AN A FI +
Sbjct: 484 DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK 543
Query: 235 GSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLE 294
G EL+ + GE VRE+F AR C++FFDE+D+I AR + G R + +
Sbjct: 544 GPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQ 603
Query: 295 IVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRT 354
I+ ++DG + N+ ++ ATNRPD +DPA+LRPGRLD+ + LPD +SR I K + R
Sbjct: 604 ILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRK 663
Query: 355 MNCERDIRFELLSRLCPNSTG 375
+D+ E L+++ +G
Sbjct: 664 SPVAKDVDLEFLAKMTNGFSG 684
Score = 471 (170.9 bits), Expect = 4.5e-44, P = 4.5e-44
Identities = 89/205 (43%), Positives = 134/205 (65%)
Query: 160 EEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLA 219
E +V Y+D+GGC++Q+ +++E+VELP+ HP F +G+ PP+G+L YGPPGTGKTL+A
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 255
Query: 220 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFD 279
RAVAN T A F + G E++ K GE +R+ F+ A I+F DE+DAI R
Sbjct: 256 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR-- 313
Query: 280 DGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLP 339
+ G+ E +R + +++ +DG R ++ V+ ATNRP+++DPAL R GR DR+V+ G+P
Sbjct: 314 EKTHGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIP 372
Query: 340 DLESRTQIFKIHTRTMNCERDIRFE 364
D R +I +IHT+ M D+ E
Sbjct: 373 DATGRLEILQIHTKNMKLADDVDLE 397
>UNIPROTKB|Q3ZBT1 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
EMBL:BC103125 IPI:IPI00710727 RefSeq:NP_001029466.1
UniGene:Bt.49331 ProteinModelPortal:Q3ZBT1 SMR:Q3ZBT1 IntAct:Q3ZBT1
STRING:Q3ZBT1 PRIDE:Q3ZBT1 GeneID:507345 KEGG:bta:507345 CTD:7415
InParanoid:Q3ZBT1 OrthoDB:EOG45TCMK NextBio:20868019 Uniprot:Q3ZBT1
Length = 806
Score = 502 (181.8 bits), Expect = 1.8e-47, P = 1.8e-47
Identities = 100/261 (38%), Positives = 157/261 (60%)
Query: 115 VVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCK 174
++ L D+ ++ + V +D ++ + + +PS TV E P VT+ D+GG +
Sbjct: 429 LIDLEDETIDAEVMNSLAVTMDDFRWALS-----QSNPSALRETVVEVPQVTWEDIGGLE 483
Query: 175 EQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVI 234
+ +++E+V+ P+ HP+KF+K G+ P KGVL YGPPG GKTLLA+A+AN A FI +
Sbjct: 484 DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK 543
Query: 235 GSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLE 294
G EL+ + GE VRE+F AR C++FFDE+D+I AR + G R + +
Sbjct: 544 GPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQ 603
Query: 295 IVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRT 354
I+ ++DG + N+ ++ ATNRPD +DPA+LRPGRLD+ + LPD +SR I K + R
Sbjct: 604 ILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRK 663
Query: 355 MNCERDIRFELLSRLCPNSTG 375
+D+ E L+++ +G
Sbjct: 664 SPVAKDVDLEFLAKMTNGFSG 684
Score = 471 (170.9 bits), Expect = 4.5e-44, P = 4.5e-44
Identities = 89/205 (43%), Positives = 134/205 (65%)
Query: 160 EEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLA 219
E +V Y+D+GGC++Q+ +++E+VELP+ HP F +G+ PP+G+L YGPPGTGKTL+A
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 255
Query: 220 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFD 279
RAVAN T A F + G E++ K GE +R+ F+ A I+F DE+DAI R
Sbjct: 256 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR-- 313
Query: 280 DGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLP 339
+ G+ E +R + +++ +DG R ++ V+ ATNRP+++DPAL R GR DR+V+ G+P
Sbjct: 314 EKTHGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIP 372
Query: 340 DLESRTQIFKIHTRTMNCERDIRFE 364
D R +I +IHT+ M D+ E
Sbjct: 373 DATGRLEILQIHTKNMKLADDVDLE 397
>UNIPROTKB|P55072 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9606 "Homo sapiens" [GO:0008289 "lipid binding"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0006281 "DNA repair" evidence=NAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IDA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP;TAS] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA;NAS] [GO:0042981 "regulation of
apoptotic process" evidence=TAS] [GO:0045184 "establishment of
protein localization" evidence=TAS] [GO:0019985 "translesion
synthesis" evidence=IMP] [GO:0035861 "site of double-strand break"
evidence=IDA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IMP] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0019903 "protein phosphatase binding" evidence=IPI] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IDA] [GO:0031593 "polyubiquitin binding" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0031334
GO:GO:0051260 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0006919 EMBL:CH471071 GO:GO:0030433 GO:GO:0006302
GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279 GO:GO:0031593
GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 Orphanet:803 PDB:3TIW
PDBsum:3TIW GO:GO:0030968 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 TCDB:3.A.16.1.1 GO:GO:0070842 GO:GO:0035861
GO:GO:0019985 EMBL:AC004472 EMBL:AL353795 PDB:3QC8 PDB:3QQ8
PDB:3QWZ PDBsum:3QC8 PDBsum:3QQ8 PDBsum:3QWZ HOVERGEN:HBG001226
PDB:3EBB PDBsum:3EBB CTD:7415 OrthoDB:EOG45TCMK EMBL:AF100752
EMBL:AK312310 EMBL:BC110913 EMBL:BC121794 EMBL:Z70768
IPI:IPI00022774 PIR:T02243 RefSeq:NP_009057.1 UniGene:Hs.529782
PDB:3HU1 PDB:3HU2 PDB:3HU3 PDB:3QQ7 PDBsum:3HU1 PDBsum:3HU2
PDBsum:3HU3 PDBsum:3QQ7 ProteinModelPortal:P55072 SMR:P55072
DIP:DIP-33543N IntAct:P55072 MINT:MINT-272884 STRING:P55072
PhosphoSite:P55072 DMDM:6094447 DOSAC-COBS-2DPAGE:P55072 OGP:P55072
REPRODUCTION-2DPAGE:IPI00022774 REPRODUCTION-2DPAGE:P55072
PaxDb:P55072 PRIDE:P55072 Ensembl:ENST00000358901 GeneID:7415
KEGG:hsa:7415 UCSC:uc003zvy.2 GeneCards:GC09M035056 HGNC:HGNC:12666
HPA:CAB005593 HPA:HPA012728 HPA:HPA012814 MIM:167320 MIM:601023
MIM:613954 neXtProt:NX_P55072 Orphanet:52430 PharmGKB:PA37289
InParanoid:P55072 BindingDB:P55072 ChEMBL:CHEMBL1075145 ChiTaRS:VCP
EvolutionaryTrace:P55072 GenomeRNAi:7415 NextBio:29034
ArrayExpress:P55072 Bgee:P55072 CleanEx:HS_VCP
Genevestigator:P55072 GermOnline:ENSG00000165280 Uniprot:P55072
Length = 806
Score = 502 (181.8 bits), Expect = 1.8e-47, P = 1.8e-47
Identities = 100/261 (38%), Positives = 157/261 (60%)
Query: 115 VVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCK 174
++ L D+ ++ + V +D ++ + + +PS TV E P VT+ D+GG +
Sbjct: 429 LIDLEDETIDAEVMNSLAVTMDDFRWALS-----QSNPSALRETVVEVPQVTWEDIGGLE 483
Query: 175 EQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVI 234
+ +++E+V+ P+ HP+KF+K G+ P KGVL YGPPG GKTLLA+A+AN A FI +
Sbjct: 484 DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK 543
Query: 235 GSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLE 294
G EL+ + GE VRE+F AR C++FFDE+D+I AR + G R + +
Sbjct: 544 GPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQ 603
Query: 295 IVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRT 354
I+ ++DG + N+ ++ ATNRPD +DPA+LRPGRLD+ + LPD +SR I K + R
Sbjct: 604 ILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRK 663
Query: 355 MNCERDIRFELLSRLCPNSTG 375
+D+ E L+++ +G
Sbjct: 664 SPVAKDVDLEFLAKMTNGFSG 684
Score = 471 (170.9 bits), Expect = 4.5e-44, P = 4.5e-44
Identities = 89/205 (43%), Positives = 134/205 (65%)
Query: 160 EEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLA 219
E +V Y+D+GGC++Q+ +++E+VELP+ HP F +G+ PP+G+L YGPPGTGKTL+A
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 255
Query: 220 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFD 279
RAVAN T A F + G E++ K GE +R+ F+ A I+F DE+DAI R
Sbjct: 256 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR-- 313
Query: 280 DGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLP 339
+ G+ E +R + +++ +DG R ++ V+ ATNRP+++DPAL R GR DR+V+ G+P
Sbjct: 314 EKTHGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIP 372
Query: 340 DLESRTQIFKIHTRTMNCERDIRFE 364
D R +I +IHT+ M D+ E
Sbjct: 373 DATGRLEILQIHTKNMKLADDVDLE 397
>MGI|MGI:99919 [details] [associations]
symbol:Vcp "valosin containing protein" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=ISO] [GO:0005102
"receptor binding" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0008289 "lipid binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0019985 "translesion synthesis" evidence=ISO]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISO] [GO:0031334 "positive regulation of protein complex
assembly" evidence=ISO] [GO:0031593 "polyubiquitin binding"
evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0035861 "site of double-strand break" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043531 "ADP
binding" evidence=ISO] [GO:0045732 "positive regulation of protein
catabolic process" evidence=ISO] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0070842 "aggresome assembly"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:99919 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0043234 GO:GO:0031334 GO:GO:0051260 GO:GO:0016887
GO:GO:0016567 GO:GO:0008289 GO:GO:0006919 GO:GO:0030433
GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279
GO:GO:0031593 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 GeneTree:ENSGT00700000104534 EMBL:AL672276
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 PDB:2PJH PDBsum:2PJH
PDB:1S3S PDBsum:1S3S HOVERGEN:HBG001226 CTD:7415 OrthoDB:EOG45TCMK
ChiTaRS:VCP EMBL:Z14044 EMBL:AK028264 EMBL:AK030751 EMBL:AK149931
EMBL:AK151109 EMBL:AK151418 EMBL:AK153249 EMBL:AK159177
EMBL:AK159509 EMBL:AK167794 EMBL:AK169140 EMBL:BC043053
EMBL:BC049114 IPI:IPI00622235 PIR:S25197 RefSeq:NP_033529.3
UniGene:Mm.245976 PDB:1E32 PDB:1R7R PDB:3CF0 PDB:3CF1 PDB:3CF2
PDB:3CF3 PDBsum:1E32 PDBsum:1R7R PDBsum:3CF0 PDBsum:3CF1
PDBsum:3CF2 PDBsum:3CF3 DisProt:DP00435 ProteinModelPortal:Q01853
SMR:Q01853 DIP:DIP-29796N IntAct:Q01853 MINT:MINT-220770
STRING:Q01853 PhosphoSite:Q01853 REPRODUCTION-2DPAGE:Q01853
UCD-2DPAGE:Q01853 PaxDb:Q01853 PRIDE:Q01853
Ensembl:ENSMUST00000030164 GeneID:269523 KEGG:mmu:269523
UCSC:uc008sor.2 InParanoid:Q01853 BindingDB:Q01853
EvolutionaryTrace:Q01853 NextBio:392876 Bgee:Q01853 CleanEx:MM_VCP
Genevestigator:Q01853 GermOnline:ENSMUSG00000028452 Uniprot:Q01853
Length = 806
Score = 502 (181.8 bits), Expect = 1.8e-47, P = 1.8e-47
Identities = 100/261 (38%), Positives = 157/261 (60%)
Query: 115 VVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCK 174
++ L D+ ++ + V +D ++ + + +PS TV E P VT+ D+GG +
Sbjct: 429 LIDLEDETIDAEVMNSLAVTMDDFRWALS-----QSNPSALRETVVEVPQVTWEDIGGLE 483
Query: 175 EQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVI 234
+ +++E+V+ P+ HP+KF+K G+ P KGVL YGPPG GKTLLA+A+AN A FI +
Sbjct: 484 DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK 543
Query: 235 GSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLE 294
G EL+ + GE VRE+F AR C++FFDE+D+I AR + G R + +
Sbjct: 544 GPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQ 603
Query: 295 IVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRT 354
I+ ++DG + N+ ++ ATNRPD +DPA+LRPGRLD+ + LPD +SR I K + R
Sbjct: 604 ILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRK 663
Query: 355 MNCERDIRFELLSRLCPNSTG 375
+D+ E L+++ +G
Sbjct: 664 SPVAKDVDLEFLAKMTNGFSG 684
Score = 471 (170.9 bits), Expect = 4.5e-44, P = 4.5e-44
Identities = 89/205 (43%), Positives = 134/205 (65%)
Query: 160 EEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLA 219
E +V Y+D+GGC++Q+ +++E+VELP+ HP F +G+ PP+G+L YGPPGTGKTL+A
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 255
Query: 220 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFD 279
RAVAN T A F + G E++ K GE +R+ F+ A I+F DE+DAI R
Sbjct: 256 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR-- 313
Query: 280 DGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLP 339
+ G+ E +R + +++ +DG R ++ V+ ATNRP+++DPAL R GR DR+V+ G+P
Sbjct: 314 EKTHGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIP 372
Query: 340 DLESRTQIFKIHTRTMNCERDIRFE 364
D R +I +IHT+ M D+ E
Sbjct: 373 DATGRLEILQIHTKNMKLADDVDLE 397
>RGD|621595 [details] [associations]
symbol:Vcp "valosin-containing protein" species:10116 "Rattus
norvegicus" [GO:0000502 "proteasome complex" evidence=IEA;ISO]
[GO:0005102 "receptor binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IEA;ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO;ISS] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0018279 "protein N-linked glycosylation via asparagine"
evidence=ISO;ISS] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0019904 "protein domain specific binding"
evidence=IEA;ISO] [GO:0019985 "translesion synthesis"
evidence=ISO;ISS] [GO:0030433 "ER-associated protein catabolic
process" evidence=ISO;ISS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IEA;ISO] [GO:0031334 "positive
regulation of protein complex assembly" evidence=IEA;ISO]
[GO:0031593 "polyubiquitin binding" evidence=IEA;ISO] [GO:0032403
"protein complex binding" evidence=IPI] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO;IMP] [GO:0035861 "site of double-strand
break" evidence=ISO;ISS] [GO:0042802 "identical protein binding"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043531 "ADP binding" evidence=IMP] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=IDA] [GO:0070842
"aggresome assembly" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 RGD:621595 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0031334 GO:GO:0051260 GO:GO:0005102 GO:GO:0016887
GO:GO:0016567 GO:GO:0042802 GO:GO:0008289 GO:GO:0006919
GO:GO:0030433 GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464
GO:GO:0018279 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:U11760 EMBL:BC060518
IPI:IPI00212014 PIR:A55190 RefSeq:NP_446316.1 UniGene:Rn.98891
ProteinModelPortal:P46462 SMR:P46462 IntAct:P46462
MINT:MINT-1954391 STRING:P46462 PhosphoSite:P46462
World-2DPAGE:0004:P46462 PRIDE:P46462 Ensembl:ENSRNOT00000046102
GeneID:116643 KEGG:rno:116643 UCSC:RGD:621595 InParanoid:P46462
NextBio:619375 Genevestigator:P46462 GermOnline:ENSRNOG00000034242
Uniprot:P46462
Length = 806
Score = 502 (181.8 bits), Expect = 1.8e-47, P = 1.8e-47
Identities = 100/261 (38%), Positives = 157/261 (60%)
Query: 115 VVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCK 174
++ L D+ ++ + V +D ++ + + +PS TV E P VT+ D+GG +
Sbjct: 429 LIDLEDETIDAEVMNSLAVTMDDFRWALS-----QSNPSALRETVVEVPQVTWEDIGGLE 483
Query: 175 EQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVI 234
+ +++E+V+ P+ HP+KF+K G+ P KGVL YGPPG GKTLLA+A+AN A FI +
Sbjct: 484 DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK 543
Query: 235 GSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLE 294
G EL+ + GE VRE+F AR C++FFDE+D+I AR + G R + +
Sbjct: 544 GPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQ 603
Query: 295 IVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRT 354
I+ ++DG + N+ ++ ATNRPD +DPA+LRPGRLD+ + LPD +SR I K + R
Sbjct: 604 ILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRK 663
Query: 355 MNCERDIRFELLSRLCPNSTG 375
+D+ E L+++ +G
Sbjct: 664 SPVAKDVDLEFLAKMTNGFSG 684
Score = 471 (170.9 bits), Expect = 4.5e-44, P = 4.5e-44
Identities = 89/205 (43%), Positives = 134/205 (65%)
Query: 160 EEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLA 219
E +V Y+D+GGC++Q+ +++E+VELP+ HP F +G+ PP+G+L YGPPGTGKTL+A
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 255
Query: 220 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFD 279
RAVAN T A F + G E++ K GE +R+ F+ A I+F DE+DAI R
Sbjct: 256 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR-- 313
Query: 280 DGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLP 339
+ G+ E +R + +++ +DG R ++ V+ ATNRP+++DPAL R GR DR+V+ G+P
Sbjct: 314 EKTHGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIP 372
Query: 340 DLESRTQIFKIHTRTMNCERDIRFE 364
D R +I +IHT+ M D+ E
Sbjct: 373 DATGRLEILQIHTKNMKLADDVDLE 397
>UNIPROTKB|E2RLQ9 [details] [associations]
symbol:VCP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 EMBL:AAEX03007949 Ensembl:ENSCAFT00000003151
NextBio:20856352 Uniprot:E2RLQ9
Length = 822
Score = 502 (181.8 bits), Expect = 2.0e-47, P = 2.0e-47
Identities = 100/261 (38%), Positives = 157/261 (60%)
Query: 115 VVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCK 174
++ L D+ ++ + V +D ++ + + +PS TV E P VT+ D+GG +
Sbjct: 445 LIDLEDETIDAEVMNSLAVTMDDFRWALS-----QSNPSALRETVVEVPQVTWEDIGGLE 499
Query: 175 EQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVI 234
+ +++E+V+ P+ HP+KF+K G+ P KGVL YGPPG GKTLLA+A+AN A FI +
Sbjct: 500 DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK 559
Query: 235 GSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLE 294
G EL+ + GE VRE+F AR C++FFDE+D+I AR + G R + +
Sbjct: 560 GPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQ 619
Query: 295 IVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRT 354
I+ ++DG + N+ ++ ATNRPD +DPA+LRPGRLD+ + LPD +SR I K + R
Sbjct: 620 ILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRK 679
Query: 355 MNCERDIRFELLSRLCPNSTG 375
+D+ E L+++ +G
Sbjct: 680 SPVAKDVDLEFLAKMTNGFSG 700
Score = 471 (170.9 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 89/205 (43%), Positives = 134/205 (65%)
Query: 160 EEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLA 219
E +V Y+D+GGC++Q+ +++E+VELP+ HP F +G+ PP+G+L YGPPGTGKTL+A
Sbjct: 212 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 271
Query: 220 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFD 279
RAVAN T A F + G E++ K GE +R+ F+ A I+F DE+DAI R
Sbjct: 272 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR-- 329
Query: 280 DGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLP 339
+ G+ E +R + +++ +DG R ++ V+ ATNRP+++DPAL R GR DR+V+ G+P
Sbjct: 330 EKTHGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIP 388
Query: 340 DLESRTQIFKIHTRTMNCERDIRFE 364
D R +I +IHT+ M D+ E
Sbjct: 389 DATGRLEILQIHTKNMKLADDVDLE 413
>UNIPROTKB|P0AAI3 [details] [associations]
symbol:ftsH species:83333 "Escherichia coli K-12"
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0006508
"proteolysis" evidence=IEA;IDA] [GO:0043273 "CTPase activity"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA;IDA]
[GO:0030145 "manganese ion binding" evidence=IDA] [GO:0016021
"integral to membrane" evidence=IEA;IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0006200 "ATP catabolic process"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0008270 GO:GO:0006508 EMBL:U18997
GO:GO:0004222 GO:GO:0016887 GO:GO:0030145 GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0043273 EMBL:U01376
HOGENOM:HOG000217276 KO:K03798 EMBL:M83138 PIR:S35109
RefSeq:NP_417645.1 RefSeq:YP_491363.1 PDB:1LV7 PDBsum:1LV7
ProteinModelPortal:P0AAI3 SMR:P0AAI3 DIP:DIP-35828N IntAct:P0AAI3
MINT:MINT-1226643 MEROPS:M41.001 PaxDb:P0AAI3 PRIDE:P0AAI3
EnsemblBacteria:EBESCT00000000369 EnsemblBacteria:EBESCT00000000370
EnsemblBacteria:EBESCT00000017485 GeneID:12933986 GeneID:947690
KEGG:ecj:Y75_p3098 KEGG:eco:b3178 PATRIC:32121774 EchoBASE:EB1469
EcoGene:EG11506 OMA:RSIIDQC ProtClustDB:PRK10733
BioCyc:EcoCyc:EG11506-MONOMER BioCyc:ECOL316407:JW3145-MONOMER
BioCyc:MetaCyc:EG11506-MONOMER SABIO-RK:P0AAI3
EvolutionaryTrace:P0AAI3 Genevestigator:P0AAI3 Uniprot:P0AAI3
Length = 644
Score = 494 (179.0 bits), Expect = 3.3e-47, P = 3.3e-47
Identities = 100/223 (44%), Positives = 140/223 (62%)
Query: 153 SVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPG 212
S M E++ T+ DV GC E E++ E+VE + P +F KLG PKGVL GPPG
Sbjct: 137 SKARMLTEDQIKTTFADVAGCDEAKEEVAELVEY-LREPSRFQKLGGKIPKGVLMVGPPG 195
Query: 213 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDA 272
TGKTLLA+A+A F + GS+ V+ +VG GA VR++F+ A+ CI+F DE+DA
Sbjct: 196 TGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDA 255
Query: 273 IGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDR 332
+G R GG +E ++T+ +++ ++DGF+ I V+ ATNRPD LDPALLRPGR DR
Sbjct: 256 VGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDR 315
Query: 333 KVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
+V GLPD+ R QI K+H R + DI +++R P +G
Sbjct: 316 QVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSG 358
>UNIPROTKB|E1BTS8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GeneTree:ENSGT00700000104534 EMBL:AADN02060646 EMBL:AADN02060647
EMBL:AADN02060648 EMBL:AADN02060649 EMBL:AADN02060650
EMBL:AADN02060651 EMBL:AADN02060652 EMBL:AADN02060653
IPI:IPI00823321 Ensembl:ENSGALT00000039430 ArrayExpress:E1BTS8
Uniprot:E1BTS8
Length = 804
Score = 499 (180.7 bits), Expect = 3.7e-47, P = 3.7e-47
Identities = 99/261 (37%), Positives = 157/261 (60%)
Query: 115 VVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCK 174
++ L D+ ++ + V +D ++ + + +PS TV E P VT+ D+GG +
Sbjct: 427 LIDLEDETIDAEVMNSLAVTMDDFRWALS-----QSNPSALRETVVEVPQVTWEDIGGLE 481
Query: 175 EQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVI 234
+ +++E+V+ P+ HP+KF+K G+ P KGVL YGPPG GKTLLA+A+AN A FI +
Sbjct: 482 DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK 541
Query: 235 GSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLE 294
G EL+ + GE VRE+F AR C++FFDE+D+I AR + G R + +
Sbjct: 542 GPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQ 601
Query: 295 IVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRT 354
I+ ++DG + N+ ++ ATNRPD +DPA+LRPGRLD+ + LPD +SR I K + R
Sbjct: 602 ILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRK 661
Query: 355 MNCERDIRFELLSRLCPNSTG 375
+D+ + L+++ +G
Sbjct: 662 SPVAKDVDLDFLAKMTNGFSG 682
Score = 418 (152.2 bits), Expect = 2.7e-38, P = 2.7e-38
Identities = 83/205 (40%), Positives = 124/205 (60%)
Query: 160 EEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLA 219
E +V Y+D+GGC++Q+ +++E+VELP+ HP F +G+ PP+G+L YGPPGTGKTL+A
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 255
Query: 220 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFD 279
RAVAN T A F + G E++ K GEG R+ A F D +
Sbjct: 256 RAVANETGAFFFLINGPEIMSKLAGEGESACRKKISPAPPPLKTAGIFKSDDCFPSPQ-- 313
Query: 280 DGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLP 339
G+ E +R + +++ +DG R ++ V+ ATNRP+++DPAL R GR DR+V+ G+P
Sbjct: 314 --THGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIP 370
Query: 340 DLESRTQIFKIHTRTMNCERDIRFE 364
D R +I +IHT+ M D+ E
Sbjct: 371 DATGRLEILQIHTKNMKLADDVDLE 395
>UNIPROTKB|P03974 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 eggNOG:COG0464
GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:M30143 PIR:A26360
RefSeq:NP_999445.1 UniGene:Ssc.856 ProteinModelPortal:P03974
SMR:P03974 STRING:P03974 GeneID:397524 KEGG:ssc:397524
Uniprot:P03974
Length = 806
Score = 499 (180.7 bits), Expect = 3.8e-47, P = 3.8e-47
Identities = 99/261 (37%), Positives = 157/261 (60%)
Query: 115 VVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCK 174
++ L D+ ++ + V +D ++ + + +PS TV E P VT+ D+GG +
Sbjct: 429 LIDLEDETIDAEVMNSLAVTMDDFRWALS-----QSNPSALRETVVEVPQVTWEDIGGLE 483
Query: 175 EQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVI 234
+ +++++V+ P+ HP+KF+K G+ P KGVL YGPPG GKTLLA+A+AN A FI +
Sbjct: 484 DVKRELQDLVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK 543
Query: 235 GSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLE 294
G EL+ + GE VRE+F AR C++FFDE+D+I AR + G R + +
Sbjct: 544 GPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQ 603
Query: 295 IVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRT 354
I+ ++DG + N+ ++ ATNRPD +DPA+LRPGRLD+ + LPD +SR I K + R
Sbjct: 604 ILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRK 663
Query: 355 MNCERDIRFELLSRLCPNSTG 375
+D+ E L+++ +G
Sbjct: 664 SPVAKDVDLEFLAKMTNGFSG 684
Score = 471 (170.9 bits), Expect = 4.5e-44, P = 4.5e-44
Identities = 89/205 (43%), Positives = 134/205 (65%)
Query: 160 EEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLA 219
E +V Y+D+GGC++Q+ +++E+VELP+ HP F +G+ PP+G+L YGPPGTGKTL+A
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 255
Query: 220 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFD 279
RAVAN T A F + G E++ K GE +R+ F+ A I+F DE+DAI R
Sbjct: 256 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR-- 313
Query: 280 DGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLP 339
+ G+ E +R + +++ +DG R ++ V+ ATNRP+++DPAL R GR DR+V+ G+P
Sbjct: 314 EKTHGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIP 372
Query: 340 DLESRTQIFKIHTRTMNCERDIRFE 364
D R +I +IHT+ M D+ E
Sbjct: 373 DATGRLEILQIHTKNMKLADDVDLE 397
>ZFIN|ZDB-GENE-030131-5408 [details] [associations]
symbol:vcp "valosin containing protein"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA;ISS] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0035861 "site of double-strand
break" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
[GO:2000058 "regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359
ZFIN:ZDB-GENE-030131-5408 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0006810 EMBL:CR318632 GO:GO:0016567 GO:GO:0007049
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK GeneTree:ENSGT00700000104534
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:AB093594 EMBL:AY576993 EMBL:BC050488 EMBL:BC067384
IPI:IPI00505091 RefSeq:NP_958889.1 UniGene:Dr.75122
ProteinModelPortal:Q7ZU99 SMR:Q7ZU99 STRING:Q7ZU99 PRIDE:Q7ZU99
Ensembl:ENSDART00000023779 GeneID:327197 KEGG:dre:327197
InParanoid:Q76KA4 NextBio:20809924 Bgee:Q7ZU99 Uniprot:Q7ZU99
Length = 806
Score = 499 (180.7 bits), Expect = 3.8e-47, P = 3.8e-47
Identities = 98/261 (37%), Positives = 158/261 (60%)
Query: 115 VVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCK 174
++ L D+ ++ + V +D ++ + + +PS TV E P++T+ D+GG
Sbjct: 429 LIDLEDETIDAEVMNSLAVTMDDFRWALS-----QSNPSALRETVVEVPNITWEDIGGLD 483
Query: 175 EQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVI 234
+ +++E+V+ P+ HP+KF+K G+ P KGVL YGPPG GKTLLA+A+AN A FI +
Sbjct: 484 DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK 543
Query: 235 GSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLE 294
G EL+ + GE VRE+F AR C++FFDE+D+I AR + G R + +
Sbjct: 544 GPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRVINQ 603
Query: 295 IVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRT 354
I+ ++DG ++ N+ ++ ATNRPD +DPA+LRPGRLD+ + LPD +SR I K + R
Sbjct: 604 ILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRIAILKANLRK 663
Query: 355 MNCERDIRFELLSRLCPNSTG 375
+D+ + L+++ +G
Sbjct: 664 SPISKDVDLDFLAKMTNGFSG 684
Score = 461 (167.3 bits), Expect = 5.6e-43, P = 5.6e-43
Identities = 88/205 (42%), Positives = 133/205 (64%)
Query: 160 EEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLA 219
E +V Y+D+GG ++Q+ +++E+VELP+ HP F +G+ PP+G+L YGPPGTGKTL+A
Sbjct: 196 ESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 255
Query: 220 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFD 279
RAVAN T A F + G E++ K GE +R+ F+ A I+F DE+DAI R
Sbjct: 256 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR-- 313
Query: 280 DGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLP 339
+ G+ E +R + +++ +DG R ++ V+ ATNRP+++DPAL R GR DR+V+ G+P
Sbjct: 314 EKTHGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIP 372
Query: 340 DLESRTQIFKIHTRTMNCERDIRFE 364
D R +I +IHT+ M D+ E
Sbjct: 373 DATGRLEILQIHTKNMKLADDVDLE 397
>POMBASE|SPBC56F2.07c [details] [associations]
symbol:SPBC56F2.07c "ribosome biogenesis factor
recycling AAA family ATPase (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016887 "ATPase activity"
evidence=ISM] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPBC56F2.07c GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0016887 PIR:T40537
RefSeq:NP_596710.1 HSSP:Q01853 ProteinModelPortal:O60058
PRIDE:O60058 EnsemblFungi:SPBC56F2.07c.1 GeneID:2540537
KEGG:spo:SPBC56F2.07c eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
OMA:SSENMAT OrthoDB:EOG49CTH0 NextBio:20801663 GO:GO:0042273
Uniprot:O60058
Length = 809
Score = 499 (180.7 bits), Expect = 3.9e-47, P = 3.9e-47
Identities = 99/215 (46%), Positives = 136/215 (63%)
Query: 161 EKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLAR 220
E P+V ++D+GG +E +K++E VE P+ H E F +LG+ PPKGVL YGPPG KT+ A+
Sbjct: 541 ESPNVHWSDIGGQEEVKQKLKESVEWPLTHGETFSRLGVRPPKGVLLYGPPGCSKTITAK 600
Query: 221 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDD 280
A+A T FI V G EL K+VGE R VR++FQ AR ++FFDE+DA+ R
Sbjct: 601 AIATETGLNFIAVKGPELFDKFVGESERAVRQVFQKARQASPSVIFFDEIDALTANR--- 657
Query: 281 GVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPD 340
G DN R + ++N+LDG +A N+ VL ATNRPD +DPAL+RPGRLDR + G P+
Sbjct: 658 --GEDNSSDRVVAALLNELDGIEALRNVLVLAATNRPDMIDPALMRPGRLDRLLYVGPPN 715
Query: 341 LESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
E+R QI KI M D+ +L++ +G
Sbjct: 716 FEARKQIVKIQAEKMKFAEDVDLDLIAEKTEGCSG 750
Score = 406 (148.0 bits), Expect = 5.4e-37, P = 5.4e-37
Identities = 79/186 (42%), Positives = 121/186 (65%)
Query: 165 VTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVAN 224
VT++ +GG + QI ++R++VELP +PE F I PP+GVL YGPPGTGKT++ RAVA
Sbjct: 276 VTFSSIGGLQAQIAQIRDIVELPFQNPELFKFFNIMPPRGVLLYGPPGTGKTMVMRAVAA 335
Query: 225 RTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGG 284
+A + G +V KY+GE +R++F+ AR+ + I+F DE+DA+ R +D
Sbjct: 336 EANAQVFTIDGPSVVGKYLGETESRLRKIFEDARAHQPSIIFIDEIDALAPKRTEDVSEA 395
Query: 285 DNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESR 344
++ T+L + LDG G + V+ ATNRP+++D AL RPGRL++++E G+PD +R
Sbjct: 396 ESRAVATLLTL---LDGMANAGKVVVIAATNRPNSIDEALRRPGRLEKEIEIGIPDKSAR 452
Query: 345 TQIFKI 350
I K+
Sbjct: 453 LDIIKL 458
>UNIPROTKB|F1P4V8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:AADN02060646 EMBL:AADN02060647 EMBL:AADN02060648
EMBL:AADN02060649 EMBL:AADN02060650 EMBL:AADN02060651
EMBL:AADN02060652 EMBL:AADN02060653 IPI:IPI00585183
Ensembl:ENSGALT00000003093 ArrayExpress:F1P4V8 Uniprot:F1P4V8
Length = 810
Score = 499 (180.7 bits), Expect = 3.9e-47, P = 3.9e-47
Identities = 99/261 (37%), Positives = 157/261 (60%)
Query: 115 VVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCK 174
++ L D+ ++ + V +D ++ + + +PS TV E P VT+ D+GG +
Sbjct: 433 LIDLEDETIDAEVMNSLAVTMDDFRWALS-----QSNPSALRETVVEVPQVTWEDIGGLE 487
Query: 175 EQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVI 234
+ +++E+V+ P+ HP+KF+K G+ P KGVL YGPPG GKTLLA+A+AN A FI +
Sbjct: 488 DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK 547
Query: 235 GSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLE 294
G EL+ + GE VRE+F AR C++FFDE+D+I AR + G R + +
Sbjct: 548 GPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQ 607
Query: 295 IVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRT 354
I+ ++DG + N+ ++ ATNRPD +DPA+LRPGRLD+ + LPD +SR I K + R
Sbjct: 608 ILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRK 667
Query: 355 MNCERDIRFELLSRLCPNSTG 375
+D+ + L+++ +G
Sbjct: 668 SPVAKDVDLDFLAKMTNGFSG 688
Score = 464 (168.4 bits), Expect = 2.7e-43, P = 2.7e-43
Identities = 87/206 (42%), Positives = 131/206 (63%)
Query: 160 EEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLA 219
E +V Y+D+GGC++Q+ +++E+VELP+ HP F +G+ PP+G+L YGPPGTGKTL+A
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 255
Query: 220 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFD 279
RAVAN T A F + G E++ K GE +R+ F+ I+F DE+DAI
Sbjct: 256 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEETEKNAPAIIFIDELDAIASDDCF 315
Query: 280 DGVGGDNEVQRTML-EIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGL 338
EV+R ++ +++ +DG R ++ V+ ATNRP+++DPAL R GR DR+V+ G+
Sbjct: 316 PSPQTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGI 375
Query: 339 PDLESRTQIFKIHTRTMNCERDIRFE 364
PD R +I +IHT+ M D+ E
Sbjct: 376 PDATGRLEILQIHTKNMKLADDVDLE 401
>UNIPROTKB|Q9KU86 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000910 "cytokinesis" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241 HSSP:P28691
KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299 RefSeq:NP_230286.1
ProteinModelPortal:Q9KU86 SMR:Q9KU86 DNASU:2615425 GeneID:2615425
KEGG:vch:VC0637 PATRIC:20080383 ProtClustDB:CLSK874054
Uniprot:Q9KU86
Length = 651
Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
Identities = 100/224 (44%), Positives = 142/224 (63%)
Query: 153 SVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPG 212
S M E++ T++DV GC E E ++E+V+ + P +F KLG P GVL GPPG
Sbjct: 141 SKARMMSEDQIKTTFSDVAGCDEAKEDVKELVDY-LRDPSRFQKLGGKIPTGVLMVGPPG 199
Query: 213 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDA 272
TGKTLLA+A+A F + GS+ V+ +VG GA VR++F+ A+ CI+F DE+DA
Sbjct: 200 TGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASPCIIFIDEIDA 259
Query: 273 IGGARFDDGVGGDN-EVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLD 331
+G R GVGG + E ++T+ +++ ++DGF+ I V+ ATNRPD LDPALLRPGR D
Sbjct: 260 VGRQR-GAGVGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFD 318
Query: 332 RKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
R+V GLPD+ R QI K+H R + D+ L++R P +G
Sbjct: 319 RQVVVGLPDVRGREQILKVHMRKVPLANDVEPSLIARGTPGFSG 362
>TIGR_CMR|VC_0637 [details] [associations]
symbol:VC_0637 "cell division protein FtsH" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0000910 "cytokinesis"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0008270 GO:GO:0006200 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299
RefSeq:NP_230286.1 ProteinModelPortal:Q9KU86 SMR:Q9KU86
DNASU:2615425 GeneID:2615425 KEGG:vch:VC0637 PATRIC:20080383
ProtClustDB:CLSK874054 Uniprot:Q9KU86
Length = 651
Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
Identities = 100/224 (44%), Positives = 142/224 (63%)
Query: 153 SVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPG 212
S M E++ T++DV GC E E ++E+V+ + P +F KLG P GVL GPPG
Sbjct: 141 SKARMMSEDQIKTTFSDVAGCDEAKEDVKELVDY-LRDPSRFQKLGGKIPTGVLMVGPPG 199
Query: 213 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDA 272
TGKTLLA+A+A F + GS+ V+ +VG GA VR++F+ A+ CI+F DE+DA
Sbjct: 200 TGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASPCIIFIDEIDA 259
Query: 273 IGGARFDDGVGGDN-EVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLD 331
+G R GVGG + E ++T+ +++ ++DGF+ I V+ ATNRPD LDPALLRPGR D
Sbjct: 260 VGRQR-GAGVGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFD 318
Query: 332 RKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
R+V GLPD+ R QI K+H R + D+ L++R P +G
Sbjct: 319 RQVVVGLPDVRGREQILKVHMRKVPLANDVEPSLIARGTPGFSG 362
>UNIPROTKB|Q6GL04 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000785
"chromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0030433 "ER-associated
protein catabolic process" evidence=ISS] [GO:0032403 "protein
complex binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0035101 "FACT complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0032403 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 HSSP:Q01853 eggNOG:COG0464
GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:BC074716 RefSeq:NP_001005677.1 UniGene:Str.1287
ProteinModelPortal:Q6GL04 SMR:Q6GL04 STRING:Q6GL04 PRIDE:Q6GL04
GeneID:448177 KEGG:xtr:448177 Xenbase:XB-GENE-969573
InParanoid:Q6GL04 Uniprot:Q6GL04
Length = 805
Score = 498 (180.4 bits), Expect = 4.8e-47, P = 4.8e-47
Identities = 99/261 (37%), Positives = 157/261 (60%)
Query: 115 VVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCK 174
++ L D+ ++ + V +D ++ + + +PS TV E P VT+ D+GG +
Sbjct: 429 LIDLEDETIDAEVMNSLAVTMDDFRWALS-----QSNPSALRETVVEVPQVTWEDIGGLE 483
Query: 175 EQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVI 234
+ +++E+V+ P+ HP+KF+K G+ P KGVL YGPPG GKTLLA+A+AN A FI +
Sbjct: 484 DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK 543
Query: 235 GSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLE 294
G EL+ + GE VRE+F AR C++FFDE+D+I AR + G R + +
Sbjct: 544 GPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQ 603
Query: 295 IVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRT 354
I+ ++DG + N+ ++ ATNRPD +DPA+LRPGRLD+ + LPD +SR I K + R
Sbjct: 604 ILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRIAILKANLRK 663
Query: 355 MNCERDIRFELLSRLCPNSTG 375
+D+ + L+++ +G
Sbjct: 664 SPVAKDVDLDFLAKMTNGFSG 684
Score = 471 (170.9 bits), Expect = 4.5e-44, P = 4.5e-44
Identities = 89/205 (43%), Positives = 134/205 (65%)
Query: 160 EEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLA 219
E +V Y+D+GGC++Q+ +++E+VELP+ HP F +G+ PP+G+L YGPPGTGKTL+A
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 255
Query: 220 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFD 279
RAVAN T A F + G E++ K GE +R+ F+ A I+F DE+DAI R
Sbjct: 256 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR-- 313
Query: 280 DGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLP 339
+ G+ E +R + +++ +DG R ++ V+ ATNRP+++DPAL R GR DR+V+ G+P
Sbjct: 314 EKTHGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIP 372
Query: 340 DLESRTQIFKIHTRTMNCERDIRFE 364
D R +I +IHT+ M D+ E
Sbjct: 373 DSTGRLEILQIHTKNMKLSDDVDLE 397
>FB|FBgn0032450 [details] [associations]
symbol:CG5776 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014134 GO:GO:0006200 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 KO:K14575 GeneTree:ENSGT00700000104502 OMA:MLLRCVA
EMBL:AY051725 RefSeq:NP_609585.1 UniGene:Dm.8715 SMR:Q9VK63
EnsemblMetazoa:FBtr0080407 EnsemblMetazoa:FBtr0329925 GeneID:34680
KEGG:dme:Dmel_CG5776 UCSC:CG5776-RA FlyBase:FBgn0032450
InParanoid:Q9VK63 OrthoDB:EOG4547DV GenomeRNAi:34680 NextBio:789659
Uniprot:Q9VK63
Length = 799
Score = 497 (180.0 bits), Expect = 6.0e-47, P = 6.0e-47
Identities = 99/229 (43%), Positives = 145/229 (63%)
Query: 149 KIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCY 208
+I PS + E P+V ++D+GG E M++ +E P+LH +KF +LGI PP+G+L +
Sbjct: 516 RIKPSAMREVLIECPNVQWSDIGGQSELRLAMQQAIEWPLLHADKFQRLGIKPPRGILMF 575
Query: 209 GPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFD 268
GPPG KT++A+A+A + F+ + G EL +VGE R VRE+F+ AR IVFFD
Sbjct: 576 GPPGCSKTMIAKALATESKLNFLSIKGPELFSMWVGESERAVREVFRKARQVAPAIVFFD 635
Query: 269 EVDAIGGARFD-DGVGGDNEV-QRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLR 326
E+DAIGG R + DG + V +R + +++ +LDG +A N+ ++ ATNRPD +D ALLR
Sbjct: 636 EIDAIGGERSEGDGSSSGSSVKERVLTQLLTELDGVEALQNVTIVAATNRPDMIDKALLR 695
Query: 327 PGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
PGR+DR + GLP E+R +I KI R M D+ E L +L +G
Sbjct: 696 PGRIDRILYVGLPQCEARREILKIKLRAMPISNDVDMEKLVQLTEGYSG 744
Score = 152 (58.6 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 47/195 (24%), Positives = 96/195 (49%)
Query: 165 VTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVA- 223
+T +GG Q++ + E +E + + + G+ +G+L YG G GK+++ A+
Sbjct: 269 ITKCQIGGLDRQLQLVEESMEYALGF--RTLPAGLRVSRGLLLYGATGCGKSMVLEAMCA 326
Query: 224 ---NRTDAC--FIRVIGSELVQKYVGEGARMVRELFQMARSK--KACIVFFDEVDAIGGA 276
R+ IR+ E+ K++GE + + +F+ A + ++ ++V +
Sbjct: 327 VAEERSQGHVQLIRINSGEVYSKFLGETEQKLGAIFERAYNHYPHPTLLLIEDVHNLCPK 386
Query: 277 RFDDGVGGDNEVQRTMLEIVNQLDG-FDARGNIKVLMATNRP-DTLDPALLRPGRLDRKV 334
+ + + V L +++QL +G+ ++AT+ DTL P++ R GRLD +V
Sbjct: 387 QENSDLV--KRVSLAFLSLLDQLSSPSQLKGSKTFVLATSSQIDTLHPSIRRAGRLDNEV 444
Query: 335 EFGLPDLESRTQIFK 349
E G P ++R +I +
Sbjct: 445 ELGAPSSQARLEIVR 459
>SGD|S000002284 [details] [associations]
symbol:CDC48 "AAA ATPase involved in multiple processes"
species:4932 "Saccharomyces cerevisiae" [GO:0005829 "cytosol"
evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IMP] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:1900182 "positive regulation of
protein localization to nucleus" evidence=IMP] [GO:0051228 "mitotic
spindle disassembly" evidence=IMP] [GO:0016320 "endoplasmic
reticulum membrane fusion" evidence=IMP] [GO:0034517 "ribophagy"
evidence=IMP] [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IMP] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IMP] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0036266 "Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IDA]
[GO:0071630 "nucleus-associated proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IMP] [GO:0016236
"macroautophagy" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0072671 "mitochondria-associated protein
catabolic process" evidence=IMP] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000002284 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0043332
EMBL:BK006938 GO:GO:0016887 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0016236 GO:GO:0031134
GO:GO:0043130 GO:GO:0034727 GO:GO:0016320 GO:GO:0034517
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OrthoDB:EOG47H8Z3 GO:GO:0034098 GO:GO:0030970
EMBL:X56956 EMBL:Z74174 PIR:S67669 RefSeq:NP_010157.1
ProteinModelPortal:P25694 SMR:P25694 DIP:DIP-2704N IntAct:P25694
MINT:MINT-547129 STRING:P25694 TCDB:3.A.16.1.2 PaxDb:P25694
PeptideAtlas:P25694 PRIDE:P25694 EnsemblFungi:YDL126C GeneID:851431
KEGG:sce:YDL126C CYGD:YDL126c GeneTree:ENSGT00700000104534
OMA:TIPRITW NextBio:968654 Genevestigator:P25694 GermOnline:YDL126C
GO:GO:0036266 GO:GO:0000837 GO:GO:0071629 GO:GO:0071712
GO:GO:0072671 GO:GO:0051228 GO:GO:0071630 GO:GO:1900182
Uniprot:P25694
Length = 835
Score = 497 (180.0 bits), Expect = 7.7e-47, P = 7.7e-47
Identities = 93/204 (45%), Positives = 137/204 (67%)
Query: 164 DVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVA 223
+V Y+D+GGC++Q+ ++RE+VELP+ HP+ F +GI PP+GVL YGPPGTGKTL+ARAVA
Sbjct: 210 EVGYDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLMARAVA 269
Query: 224 NRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVG 283
N T A F + G E++ K GE +R+ F+ A I+F DE+D+I R D
Sbjct: 270 NETGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPKR--DKTN 327
Query: 284 GDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLES 343
G+ E +R + +++ +DG AR N+ V+ ATNRP+++DPAL R GR DR+V+ G+PD
Sbjct: 328 GEVE-RRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGIPDATG 386
Query: 344 RTQIFKIHTRTMNCERDIRFELLS 367
R ++ +IHT+ M D+ E L+
Sbjct: 387 RLEVLRIHTKNMKLADDVDLEALA 410
Score = 462 (167.7 bits), Expect = 5.1e-43, P = 5.1e-43
Identities = 96/227 (42%), Positives = 140/227 (61%)
Query: 151 DPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGP 210
+PS TV E +VT++DVGG E E+++E VE P+LHP+++ K G+ P KGVL YGP
Sbjct: 470 NPSALRETVVESVNVTWDDVGGLDEIKEELKETVEYPVLHPDQYTKFGLSPSKGVLFYGP 529
Query: 211 PGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEV 270
PGTGKTLLA+AVA A FI V G EL+ + GE +R++F AR+ +VF DE+
Sbjct: 530 PGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDEL 589
Query: 271 DAIGGARFDD-G-VGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPG 328
D+I AR G GG ++ R + +++ ++DG +A+ N+ V+ ATNRPD +DPA+LRPG
Sbjct: 590 DSIAKARGGSLGDAGGASD--RVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPAILRPG 647
Query: 329 RLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
RLD+ + LPD +R I R E + +++ +G
Sbjct: 648 RLDQLIYVPLPDENARLSILNAQLRKTPLEPGLELTAIAKATQGFSG 694
>UNIPROTKB|P23787 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8355 "Xenopus laevis" [GO:0000785 "chromatin" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=ISS] [GO:0016567
"protein ubiquitination" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0034214 "protein hexamerization" evidence=IDA] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0035101 "FACT
complex" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226 CTD:7415 EMBL:X54240
EMBL:BC046949 PIR:S19738 RefSeq:NP_001095217.1 UniGene:Xl.8775
ProteinModelPortal:P23787 SMR:P23787 PRIDE:P23787 GeneID:380491
KEGG:xla:380491 Xenbase:XB-GENE-969578 Uniprot:P23787
Length = 805
Score = 496 (179.7 bits), Expect = 8.0e-47, P = 8.0e-47
Identities = 99/261 (37%), Positives = 157/261 (60%)
Query: 115 VVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCK 174
++ L D+ ++ + V +D ++ + + +PS TV E P VT+ D+GG +
Sbjct: 429 LIDLEDETIDAEVMNSLAVTMDDFRWALS-----QSNPSALRETVVEVPQVTWEDIGGLE 483
Query: 175 EQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVI 234
+ +++E+V+ P+ HP+KF+K G+ P KGVL YGPPG GKTLLA+A+AN A FI +
Sbjct: 484 DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK 543
Query: 235 GSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLE 294
G EL+ + GE VRE+F AR C++FFDE+D+I AR + G R + +
Sbjct: 544 GPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQ 603
Query: 295 IVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRT 354
I+ ++DG + N+ ++ ATNRPD +DPA+LRPGRLD+ + LPD +SR I K + R
Sbjct: 604 ILTEMDGMSIKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRMAILKANLRK 663
Query: 355 MNCERDIRFELLSRLCPNSTG 375
+D+ + L+++ +G
Sbjct: 664 SPVAKDVDVDFLAKMTNGFSG 684
Score = 471 (170.9 bits), Expect = 4.5e-44, P = 4.5e-44
Identities = 89/205 (43%), Positives = 134/205 (65%)
Query: 160 EEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLA 219
E +V Y+D+GGC++Q+ +++E+VELP+ HP F +G+ PP+G+L YGPPGTGKTL+A
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 255
Query: 220 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFD 279
RAVAN T A F + G E++ K GE +R+ F+ A I+F DE+DAI R
Sbjct: 256 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR-- 313
Query: 280 DGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLP 339
+ G+ E +R + +++ +DG R ++ V+ ATNRP+++DPAL R GR DR+V+ G+P
Sbjct: 314 EKTHGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIP 372
Query: 340 DLESRTQIFKIHTRTMNCERDIRFE 364
D R +I +IHT+ M D+ E
Sbjct: 373 DSTGRLEILQIHTKNMKLSDDVDLE 397
>TAIR|locus:2101933 [details] [associations]
symbol:AtCDC48B "AT3G53230" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005794 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005654 GO:GO:0005730 GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0045732 GO:GO:0009524 EMBL:AL132958 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK228801 IPI:IPI00520856 PIR:T46169
RefSeq:NP_190891.1 UniGene:At.23168 ProteinModelPortal:Q9SCN8
SMR:Q9SCN8 STRING:Q9SCN8 PaxDb:Q9SCN8 PRIDE:Q9SCN8
EnsemblPlants:AT3G53230.1 GeneID:824489 KEGG:ath:AT3G53230
GeneFarm:1909 TAIR:At3g53230 InParanoid:Q9SCN8 OMA:DIRRYEE
PhylomeDB:Q9SCN8 Genevestigator:Q9SCN8 GermOnline:AT3G53230
Uniprot:Q9SCN8
Length = 815
Score = 492 (178.3 bits), Expect = 2.4e-46, P = 2.4e-46
Identities = 106/262 (40%), Positives = 153/262 (58%)
Query: 115 VVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCK 174
V+ L D+ +I M V D +Q + +PS TV E P+V++ D+GG +
Sbjct: 433 VIDLDDEEIDAEILNSMAVSNDH--FQTALG---NSNPSALRETVVEVPNVSWEDIGGLE 487
Query: 175 EQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVI 234
+++E V+ P+ HPEKF K G+ P KGVL YGPPG GKTLLA+A+AN A FI +
Sbjct: 488 NVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK 547
Query: 235 GSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVG-GDNEVQRTML 293
G EL+ + GE VRE+F AR C++FFDE+D+I R + VG R +
Sbjct: 548 GPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQR-GNSVGDAGGAADRVLN 606
Query: 294 EIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTR 353
+++ ++DG +A+ + ++ ATNRPD +DPALLRPGRLD+ + LPD ESR QIFK R
Sbjct: 607 QLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYQIFKSCLR 666
Query: 354 TMNCERDIRFELLSRLCPNSTG 375
+D+ L++ +G
Sbjct: 667 KSPVAKDVDLRALAKYTQGFSG 688
Score = 468 (169.8 bits), Expect = 1.0e-43, P = 1.0e-43
Identities = 90/210 (42%), Positives = 140/210 (66%)
Query: 160 EEKPD-VTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLL 218
EE+ D V Y+DVGG ++Q+ ++RE+VELP+ HP+ F +G+ PPKG+L YGPPG+GKTL+
Sbjct: 199 EERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLI 258
Query: 219 ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARF 278
ARAVAN T A F + G E++ K GE +R+ F+ A I+F DE+D+I R
Sbjct: 259 ARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR- 317
Query: 279 DDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGL 338
+ G+ E +R + +++ +DG +R ++ V+ ATNRP+++DPAL R GR DR+++ G+
Sbjct: 318 -EKTHGEVE-RRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGV 375
Query: 339 PDLESRTQIFKIHTRTMNCERDIRFELLSR 368
PD R ++ +IHT+ M D+ E +S+
Sbjct: 376 PDEIGRLEVLRIHTKNMKLAEDVDLERVSK 405
>UNIPROTKB|F1SIH8 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:FP102396 Ensembl:ENSSSCT00000005837 ArrayExpress:F1SIH8
Uniprot:F1SIH8
Length = 808
Score = 491 (177.9 bits), Expect = 2.9e-46, P = 2.9e-46
Identities = 100/263 (38%), Positives = 157/263 (59%)
Query: 115 VVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCK 174
++ L D+ ++ + V +D ++ + + +PS TV E P VT+ D+GG +
Sbjct: 429 LIDLEDETIDAEVMNSLAVTMDDFRWALS-----QSNPSALRETVVEVPQVTWEDIGGLE 483
Query: 175 EQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVI 234
+ +++E+V+ P+ HP+KF+K G+ P KGVL YGPPG GKTLLA+A+AN A FI +
Sbjct: 484 DVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK 543
Query: 235 GSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLE 294
G EL+ + GE VRE+F AR C++FFDE+D+I AR + G R + +
Sbjct: 544 GPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQ 603
Query: 295 IVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRT 354
I+ ++DG + N+ ++ ATNRPD +DPA+LRPGRLD+ + LPD +SR I K + R
Sbjct: 604 ILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRK 663
Query: 355 MNCER--DIRFELLSRLCPNSTG 375
+ D+ E L+++ +G
Sbjct: 664 SPVAKAGDVDLEFLAKMTNGFSG 686
Score = 471 (170.9 bits), Expect = 4.6e-44, P = 4.6e-44
Identities = 89/205 (43%), Positives = 134/205 (65%)
Query: 160 EEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLA 219
E +V Y+D+GGC++Q+ +++E+VELP+ HP F +G+ PP+G+L YGPPGTGKTL+A
Sbjct: 196 ESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 255
Query: 220 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFD 279
RAVAN T A F + G E++ K GE +R+ F+ A I+F DE+DAI R
Sbjct: 256 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR-- 313
Query: 280 DGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLP 339
+ G+ E +R + +++ +DG R ++ V+ ATNRP+++DPAL R GR DR+V+ G+P
Sbjct: 314 EKTHGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIP 372
Query: 340 DLESRTQIFKIHTRTMNCERDIRFE 364
D R +I +IHT+ M D+ E
Sbjct: 373 DATGRLEILQIHTKNMKLADDVDLE 397
>ASPGD|ASPL0000069340 [details] [associations]
symbol:AN7254 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEP]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0051228
"mitotic spindle disassembly" evidence=IEA] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0043332 "mating projection tip" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0034098 "Cdc48p-Npl4p-Ufd1p
AAA ATPase complex" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0006950 GO:GO:0015031 GO:GO:0007049 EMBL:BN001304 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AACD01000124 RefSeq:XP_680523.1
STRING:Q5AWS6 PRIDE:Q5AWS6 GeneID:2869922 KEGG:ani:AN7254.2
OrthoDB:EOG47H8Z3 Uniprot:Q5AWS6
Length = 823
Score = 491 (177.9 bits), Expect = 3.2e-46, P = 3.2e-46
Identities = 91/204 (44%), Positives = 136/204 (66%)
Query: 164 DVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVA 223
+V Y+D+GGC++Q+ ++RE+VELP+ HP+ F +GI PP+G+L YGPPGTGKTL+ARAVA
Sbjct: 221 EVGYDDIGGCRKQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVA 280
Query: 224 NRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVG 283
N T A F + G E++ K GE +R+ F+ A I+F DE+D+I R +
Sbjct: 281 NETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKR--EKTN 338
Query: 284 GDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLES 343
G+ E +R + +++ +DG AR N+ V+ ATNRP+++DPAL R GR DR+V+ G+PD
Sbjct: 339 GEVE-RRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTG 397
Query: 344 RTQIFKIHTRTMNCERDIRFELLS 367
R +I IHT+ M D+ E ++
Sbjct: 398 RLEILSIHTKNMKLGEDVDLETIA 421
Score = 443 (161.0 bits), Expect = 5.6e-41, P = 5.6e-41
Identities = 96/255 (37%), Positives = 148/255 (58%)
Query: 115 VVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCK 174
++ L + ++ + + V ++ +Y + + P ++ + V E P+V + D+GG +
Sbjct: 450 LIDLDEDTIDAEVLDSLGVTMENFRYALGVSNPS----ALREVAVVEVPNVRWEDIGGLE 505
Query: 175 EQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVI 234
E ++ E V+ P+ HPEKF K G+ P +GVL YGPPGTGKT+LA+AVAN A FI V
Sbjct: 506 EVKRELIESVQYPVDHPEKFQKFGLSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVK 565
Query: 235 GSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGD--NEVQRTM 292
G EL+ + GE +R++F AR+ C+VF DE+D+I +R G GD R +
Sbjct: 566 GPELLSMWFGESESNIRDIFDKARAAAPCVVFLDELDSIAKSR--GGSVGDAGGASDRVV 623
Query: 293 LEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHT 352
+++ ++DG ++ N+ V+ ATNRP+ LD AL+RPGRLD V LPD SR I K
Sbjct: 624 NQLLTEMDGMTSKKNVFVIGATNRPEQLDAALVRPGRLDTLVYVPLPDQASREGILKAQL 683
Query: 353 RTMNCERDIRFELLS 367
R D+ E ++
Sbjct: 684 RKTPVASDVDIEFIA 698
>UNIPROTKB|G4N517 [details] [associations]
symbol:MGG_05193 "Cell division control protein 48"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0051301 EMBL:CM001233 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043581 KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
RefSeq:XP_003712735.1 ProteinModelPortal:G4N517 SMR:G4N517
EnsemblFungi:MGG_05193T0 GeneID:2675720 KEGG:mgr:MGG_05193
Uniprot:G4N517
Length = 820
Score = 490 (177.5 bits), Expect = 4.1e-46, P = 4.1e-46
Identities = 92/204 (45%), Positives = 137/204 (67%)
Query: 164 DVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVA 223
+V Y+D+GGC++Q+ ++RE+VELP+ HP+ F +GI PP+GVL YGPPGTGKTL+ARAVA
Sbjct: 218 EVGYDDIGGCRKQMAQIREMVELPLRHPQLFKSIGIKPPRGVLLYGPPGTGKTLMARAVA 277
Query: 224 NRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVG 283
N T A F + G E++ K GE +R+ F+ A I+F DE+D+I R +
Sbjct: 278 NETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKR--EKTN 335
Query: 284 GDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLES 343
G+ E +R + +++ +DG AR N+ V+ ATNRP+++DPAL R GR DR+V+ G+PD
Sbjct: 336 GEVE-RRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTG 394
Query: 344 RTQIFKIHTRTMNCERDIRFELLS 367
R +I +IHT+ M D+ E ++
Sbjct: 395 RLEILQIHTKNMKLGDDVDLEQIA 418
Score = 448 (162.8 bits), Expect = 1.6e-41, P = 1.6e-41
Identities = 96/255 (37%), Positives = 148/255 (58%)
Query: 115 VVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCK 174
++ L + ++ + + V ++ ++ + + P ++ + V E P+V + D+GG
Sbjct: 447 LIDLDEDTIDAEVLDSLGVTMENFRFALGVSNPS----ALREVAVVEVPNVRWEDIGGLD 502
Query: 175 EQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVI 234
E + +RE V+ P+ HPEKF+K G+ P +GVL YGPPGTGKT+LA+AVAN A FI V
Sbjct: 503 EVKQDLREQVQYPVDHPEKFLKFGLSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVK 562
Query: 235 GSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGD--NEVQRTM 292
G EL+ + GE +R++F AR+ CIVF DE+D+I AR G GD R +
Sbjct: 563 GPELLSMWFGESESNIRDIFDKARAAAPCIVFLDELDSIAKAR--GGSVGDAGGASDRVV 620
Query: 293 LEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHT 352
+++ ++DG ++ N+ V+ ATNRP+ LDPAL RPGRLD + LPD R I K
Sbjct: 621 NQLLTEMDGMTSKKNVFVIGATNRPEQLDPALCRPGRLDSLIYVPLPDELGRLSILKAQL 680
Query: 353 RTMNCERDIRFELLS 367
R D+ + ++
Sbjct: 681 RKTPVSDDVDLQYIA 695
>TAIR|locus:2157637 [details] [associations]
symbol:VAR1 "VARIEGATED 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA;IDA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010304 "PSII
associated light-harvesting complex II catabolic process"
evidence=RCA;TAS] [GO:0009579 "thylakoid" evidence=IDA] [GO:0010205
"photoinhibition" evidence=IMP] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0006098 "pentose-phosphate shunt" evidence=RCA]
[GO:0009773 "photosynthetic electron transport in photosystem I"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0007275 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0006508 GO:GO:0009941
GO:GO:0004222 GO:GO:0016887 EMBL:AB023032 GO:GO:0010205
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0009535
HOGENOM:HOG000217276 KO:K03798 ProtClustDB:CLSN2688633
GO:GO:0010304 EMBL:AY126987 IPI:IPI00517420 RefSeq:NP_568604.1
UniGene:At.21670 UniGene:At.66720 ProteinModelPortal:Q9FH02
SMR:Q9FH02 STRING:Q9FH02 MEROPS:M41.024 PaxDb:Q9FH02 PRIDE:Q9FH02
EnsemblPlants:AT5G42270.1 GeneID:834232 KEGG:ath:AT5G42270
GeneFarm:4746 TAIR:At5g42270 InParanoid:Q9FH02 OMA:RARASMP
PhylomeDB:Q9FH02 Genevestigator:Q9FH02 GermOnline:AT5G42270
Uniprot:Q9FH02
Length = 704
Score = 485 (175.8 bits), Expect = 4.1e-46, P = 4.1e-46
Identities = 101/219 (46%), Positives = 139/219 (63%)
Query: 160 EEKPD--VTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTL 217
+E P+ VT+ DV G + +++EVV+ + +P+K+ LG PKG L GPPGTGKTL
Sbjct: 240 QEVPETGVTFGDVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTL 298
Query: 218 LARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGAR 277
LARAVA F SE V+ +VG GA VR+LF+ A+SK CIVF DE+DA+G R
Sbjct: 299 LARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQR 358
Query: 278 FDDGVGGDN-EVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEF 336
G+GG N E ++T+ +++ ++DGF + VL ATNRPD LD ALLRPGR DR+V
Sbjct: 359 -GAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTV 417
Query: 337 GLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
PD+ R QI K+H+R +D+ +E ++R P TG
Sbjct: 418 DRPDVAGRVQILKVHSRGKAIGKDVDYEKVARRTPGFTG 456
>TIGR_CMR|SO_1197 [details] [associations]
symbol:SO_1197 "ATP-dependent metalloprotease FtsH"
species:211586 "Shewanella oneidensis MR-1" [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051301 "cell division" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006200
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
OMA:RSIIDQC RefSeq:NP_716822.2 ProteinModelPortal:Q8EHM2 SMR:Q8EHM2
GeneID:1169025 KEGG:son:SO_1197 PATRIC:23522048
ProtClustDB:CLSK906146 Uniprot:Q8EHM2
Length = 652
Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
Identities = 95/216 (43%), Positives = 139/216 (64%)
Query: 160 EEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLA 219
E++ T+ DV GC E E+++E+V+ + P KF KLG P GVL GPPGTGKTLLA
Sbjct: 149 EDQIKTTFADVAGCDEAKEEVKELVDY-LRDPTKFQKLGGRIPTGVLMVGPPGTGKTLLA 207
Query: 220 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFD 279
+A+A + F + GS+ V+ +VG GA VR++F+ A+ CI+F DE+DA+G R
Sbjct: 208 KAIAGESKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKSAPCIIFIDEIDAVGRQRGA 267
Query: 280 DGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLP 339
GG +E ++T+ +++ ++DGF+ I V+ ATNRPD LD ALLRPGR DR+V GLP
Sbjct: 268 GLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDSALLRPGRFDRQVVVGLP 327
Query: 340 DLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
D+ R QI K+H R + D++ +++R P +G
Sbjct: 328 DVRGREQILKVHMRKVPLSEDVKASVIARGTPGFSG 363
>POMBASE|SPAC1565.08 [details] [associations]
symbol:cdc48 "AAA family ATPase Cdc48" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0006906 "vesicle fusion"
evidence=ISO] [GO:0016887 "ATPase activity" evidence=ISM]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISS] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IGI] [GO:0033554 "cellular response to
stress" evidence=IGI] [GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase
complex" evidence=ISO] [GO:0051230 "spindle disassembly"
evidence=TAS] [GO:0061166 "establishment of endoplasmic reticulum
localization involved in endoplasmic reticulum polarization at cell
division site" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 PomBase:SPAC1565.08 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0033554 GO:GO:0016887 GO:GO:0000790 GO:GO:0030433
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0006906 GO:GO:0033047 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0061166
OrthoDB:EOG47H8Z3 RefSeq:NP_593287.2 ProteinModelPortal:Q9P3A7
SMR:Q9P3A7 IntAct:Q9P3A7 STRING:Q9P3A7 PRIDE:Q9P3A7
EnsemblFungi:SPAC1565.08.1 GeneID:2542744 KEGG:spo:SPAC1565.08
OMA:IVTIHPC NextBio:20803789 GO:GO:0034098 GO:GO:0030970
GO:GO:0051230 Uniprot:Q9P3A7
Length = 815
Score = 489 (177.2 bits), Expect = 5.1e-46, P = 5.1e-46
Identities = 91/204 (44%), Positives = 136/204 (66%)
Query: 164 DVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVA 223
+V Y+D+GGC+ Q+ ++RE+VELP+ HP+ F +GI PP+G+L YGPPGTGKTL+ARAVA
Sbjct: 220 EVGYDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVA 279
Query: 224 NRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVG 283
N T A F + G E++ K GE +R+ F+ A I+F DE+D+I R +
Sbjct: 280 NETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKR--EKTN 337
Query: 284 GDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLES 343
G+ E +R + +++ +DG AR N+ V+ ATNRP+++DPAL R GR DR+V+ G+PD
Sbjct: 338 GEVE-RRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPTG 396
Query: 344 RTQIFKIHTRTMNCERDIRFELLS 367
R +I +IHT+ M D+ E ++
Sbjct: 397 RLEILRIHTKNMKLADDVDLEQIA 420
Score = 473 (171.6 bits), Expect = 2.9e-44, P = 2.9e-44
Identities = 96/233 (41%), Positives = 144/233 (61%)
Query: 151 DPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGP 210
+PS TV E P+V + D+GG +E ++RE V++P+++ EKF++ G+ P KGVL +GP
Sbjct: 480 NPSALRETVVEVPNVRWEDIGGLEEVKRELRETVQMPVMYAEKFLRFGVTPSKGVLFFGP 539
Query: 211 PGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEV 270
PGTGKTLLA+A+AN A FI V G EL+ + GE VR++F AR+ C+VF DE+
Sbjct: 540 PGTGKTLLAKAIANECSANFISVKGPELLSMWFGESESNVRDIFDKARAAAPCVVFLDEL 599
Query: 271 DAIG---GARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRP 327
D+I GA D GGD R + +++ ++DG +++ N+ V+ ATNRPD +DPAL+RP
Sbjct: 600 DSIAKARGASAGDSGGGD----RVVNQLLTEMDGVNSKKNVFVIGATNRPDQIDPALMRP 655
Query: 328 GRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTGKHSPF 380
GRLD+ + LPD E+R I + R D+ +++ +G F
Sbjct: 656 GRLDQLIYVPLPDEEARFSILQTQLRHTPVAEDVDLRAVAKATHGFSGADLEF 708
>TAIR|locus:2085064 [details] [associations]
symbol:CDC48 "cell division cycle 48" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
[GO:0009846 "pollen germination" evidence=IMP] [GO:0009860 "pollen
tube growth" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0016310 "phosphorylation"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005794 GO:GO:0005618 GO:GO:0046686
GO:GO:0005635 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC015985
GO:GO:0005730 GO:GO:0051301 GO:GO:0005819 GO:GO:0048046
GO:GO:0015031 GO:GO:0007049 GO:GO:0009860 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0022626 GO:GO:0009846 GO:GO:0009524 EMBL:U37587 EMBL:AY065076
EMBL:AY094434 IPI:IPI00547533 PIR:S60112 RefSeq:NP_187595.1
UniGene:At.21739 UniGene:At.33291 ProteinModelPortal:P54609
SMR:P54609 IntAct:P54609 STRING:P54609 PaxDb:P54609 PRIDE:P54609
ProMEX:P54609 EnsemblPlants:AT3G09840.1 GeneID:820142
KEGG:ath:AT3G09840 GeneFarm:1893 TAIR:At3g09840
HOGENOM:HOG000223224 InParanoid:P54609 KO:K13525 OMA:QIANECH
PhylomeDB:P54609 ProtClustDB:CLSN2684913 Genevestigator:P54609
GermOnline:AT3G09840 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
Uniprot:P54609
Length = 809
Score = 488 (176.8 bits), Expect = 6.3e-46, P = 6.3e-46
Identities = 99/227 (43%), Positives = 140/227 (61%)
Query: 151 DPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGP 210
+PS TV E P+V++ND+GG + +++E V+ P+ HPEKF K G+ P KGVL YGP
Sbjct: 463 NPSALRETVVEVPNVSWNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGP 522
Query: 211 PGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEV 270
PG GKTLLA+A+AN A FI V G EL+ + GE VRE+F AR C++FFDE+
Sbjct: 523 PGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDEL 582
Query: 271 DAIGGARFDDGVGGDN--EVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPG 328
D+I R G GGD R + +++ ++DG +A+ + ++ ATNRPD +D ALLRPG
Sbjct: 583 DSIATQR-GGGSGGDGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPG 641
Query: 329 RLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
RLD+ + LPD +SR IFK R +D+ L++ +G
Sbjct: 642 RLDQLIYIPLPDEDSRLNIFKAALRKSPIAKDVDIGALAKYTQGFSG 688
Score = 473 (171.6 bits), Expect = 2.8e-44, P = 2.8e-44
Identities = 89/209 (42%), Positives = 138/209 (66%)
Query: 160 EEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLA 219
E DV Y+DVGG ++Q+ ++RE+VELP+ HP+ F +G+ PPKG+L YGPPG+GKTL+A
Sbjct: 199 ERLDDVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIA 258
Query: 220 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFD 279
RAVAN T A F + G E++ K GE +R+ F+ A I+F DE+D+I R
Sbjct: 259 RAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR-- 316
Query: 280 DGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLP 339
+ G+ E +R + +++ +DG +R ++ V+ ATNRP+++DPAL R GR DR+++ G+P
Sbjct: 317 EKTNGEVE-RRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVP 375
Query: 340 DLESRTQIFKIHTRTMNCERDIRFELLSR 368
D R ++ +IHT+ M D+ E +S+
Sbjct: 376 DEIGRLEVLRIHTKNMKLAEDVDLERISK 404
>MGI|MGI:1916847 [details] [associations]
symbol:Afg3l2 "AFG3(ATPase family gene 3)-like 2 (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0007005 "mitochondrion organization" evidence=IGI] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0008053 "mitochondrial fusion"
evidence=IGI] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016265 "death" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0021675 "nerve development" evidence=IMP]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=IGI] [GO:0040014
"regulation of multicellular organism growth" evidence=IMP]
[GO:0042407 "cristae formation" evidence=IGI] [GO:0042552
"myelination" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048747 "muscle fiber development" evidence=IMP]
[GO:0060013 "righting reflex" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1916847
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
MEROPS:M41.007 EMBL:BC036999 EMBL:BC043056 IPI:IPI00170357
RefSeq:NP_081406.1 UniGene:Mm.426052 ProteinModelPortal:Q8JZQ2
SMR:Q8JZQ2 IntAct:Q8JZQ2 STRING:Q8JZQ2 PhosphoSite:Q8JZQ2
PaxDb:Q8JZQ2 PRIDE:Q8JZQ2 Ensembl:ENSMUST00000025408 GeneID:69597
KEGG:mmu:69597 UCSC:uc008fmf.1 InParanoid:Q8JZQ2 NextBio:329880
Bgee:Q8JZQ2 CleanEx:MM_AFG3L2 Genevestigator:Q8JZQ2
GermOnline:ENSMUSG00000024527 Uniprot:Q8JZQ2
Length = 802
Score = 470 (170.5 bits), Expect = 7.7e-46, Sum P(2) = 7.7e-46
Identities = 90/214 (42%), Positives = 135/214 (63%)
Query: 155 TMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTG 214
T ++++ DV + DV GC+E ++ E V + +P+++ LG PKG + GPPGTG
Sbjct: 294 TAKVLKDEIDVKFKDVAGCEEAKLEIMEFVNF-LKNPKQYQDLGAKIPKGAILTGPPGTG 352
Query: 215 KTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIG 274
KTLLA+A A + FI V GSE ++ +VG G VR+LF +AR CI+F DE+DA+G
Sbjct: 353 KTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVG 412
Query: 275 GARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKV 334
R GG +E + T+ +++ ++DGF+ N+ +L TNRPD LDPALLRPGR DR++
Sbjct: 413 RKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQI 472
Query: 335 EFGLPDLESRTQIFKIHTRTMNCERDIRFELLSR 368
G PD++ R IFK+H R + + + + L+R
Sbjct: 473 FIGPPDIKGRASIFKVHLRPLKLDSALEKDKLAR 506
Score = 41 (19.5 bits), Expect = 7.7e-46, Sum P(2) = 7.7e-46
Identities = 6/16 (37%), Positives = 12/16 (75%)
Query: 2 APEPEDEIKDEKNPRP 17
A EP++ + ++K P+P
Sbjct: 86 ASEPKEAVGEKKEPQP 101
>TIGR_CMR|CPS_3452 [details] [associations]
symbol:CPS_3452 "ATP-dependent metalloprotease FtsH"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 OMA:RSIIDQC
RefSeq:YP_270126.1 ProteinModelPortal:Q47YJ4 SMR:Q47YJ4
STRING:Q47YJ4 GeneID:3519317 KEGG:cps:CPS_3452 PATRIC:21469851
BioCyc:CPSY167879:GI48-3480-MONOMER Uniprot:Q47YJ4
Length = 660
Score = 481 (174.4 bits), Expect = 7.9e-46, P = 7.9e-46
Identities = 94/216 (43%), Positives = 137/216 (63%)
Query: 160 EEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLA 219
EE+ T+ DV GC E E + E+V+ + P +F KLG P G+L G PGTGKTLLA
Sbjct: 146 EEQIKTTFADVAGCDEAKEDVAELVDY-LREPSRFQKLGGRIPSGILLVGQPGTGKTLLA 204
Query: 220 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFD 279
+A+A F + GS+ V+ +VG GA VR++F+ A+ CI+F DE+DA+G R
Sbjct: 205 KAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGA 264
Query: 280 DGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLP 339
GG +E ++T+ +++ ++DGF+ + V+ ATNRPD LDPALLRPGR DR+V GLP
Sbjct: 265 GMGGGHDEREQTLNQMLVEMDGFEGNEGVIVIAATNRPDVLDPALLRPGRFDRQVTVGLP 324
Query: 340 DLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
D+ R QI K+H R + D++ E+++R P +G
Sbjct: 325 DIRGREQILKVHMRKVPLGDDVKAEVIARGTPGFSG 360
>UNIPROTKB|Q5LNU8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 96/223 (43%), Positives = 139/223 (62%)
Query: 153 SVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPG 212
S M E+ VT++DV G E E++ E+VE + +P+KF +LG PKG L GPPG
Sbjct: 141 SKAKMLTEKHGRVTFDDVAGIDEAKEELEEIVEF-LRNPQKFSRLGGKIPKGALLVGPPG 199
Query: 213 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDA 272
TGKTLLARA+A F + GS+ V+ +VG GA VR++F+ A+ CIVF DE+DA
Sbjct: 200 TGKTLLARAIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDA 259
Query: 273 IGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDR 332
+G R GG++E ++T+ +++ ++DGF+A + +L ATNR D LDPALLRPGR DR
Sbjct: 260 VGRHRGAGYGGGNDEREQTLNQLLVEMDGFEANEGVIILAATNRKDVLDPALLRPGRFDR 319
Query: 333 KVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
V G PD++ R +I +H R D+ +++R P +G
Sbjct: 320 NVTVGNPDIKGREKILGVHARKTPLGPDVDLRIIARGTPGFSG 362
>TIGR_CMR|SPO_3105 [details] [associations]
symbol:SPO_3105 "ATP-dependent metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 96/223 (43%), Positives = 139/223 (62%)
Query: 153 SVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPG 212
S M E+ VT++DV G E E++ E+VE + +P+KF +LG PKG L GPPG
Sbjct: 141 SKAKMLTEKHGRVTFDDVAGIDEAKEELEEIVEF-LRNPQKFSRLGGKIPKGALLVGPPG 199
Query: 213 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDA 272
TGKTLLARA+A F + GS+ V+ +VG GA VR++F+ A+ CIVF DE+DA
Sbjct: 200 TGKTLLARAIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDA 259
Query: 273 IGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDR 332
+G R GG++E ++T+ +++ ++DGF+A + +L ATNR D LDPALLRPGR DR
Sbjct: 260 VGRHRGAGYGGGNDEREQTLNQLLVEMDGFEANEGVIILAATNRKDVLDPALLRPGRFDR 319
Query: 333 KVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
V G PD++ R +I +H R D+ +++R P +G
Sbjct: 320 NVTVGNPDIKGREKILGVHARKTPLGPDVDLRIIARGTPGFSG 362
>WB|WBGene00007352 [details] [associations]
symbol:cdc-48.1 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040002
"collagen and cuticulin-based cuticle development" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0002119
GO:GO:0040011 GO:GO:0040018 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 GO:GO:0040002
HOGENOM:HOG000223224 KO:K13525 OMA:QIANECH InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0034098 GeneTree:ENSGT00700000104534
GO:GO:0071712 EMBL:Z49886 PIR:T18970 RefSeq:NP_496273.1
ProteinModelPortal:P54811 SMR:P54811 DIP:DIP-26650N IntAct:P54811
MINT:MINT-1061999 STRING:P54811 PaxDb:P54811 PRIDE:P54811
EnsemblMetazoa:C06A1.1.1 EnsemblMetazoa:C06A1.1.2 GeneID:174624
KEGG:cel:CELE_C06A1.1 UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1
InParanoid:P54811 NextBio:884814 Uniprot:P54811
Length = 809
Score = 486 (176.1 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 95/222 (42%), Positives = 141/222 (63%)
Query: 149 KIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCY 208
K PS V E P+ T++D+GG + +++E+V+ P+ HPEK++K G+ P +GVL Y
Sbjct: 464 KSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFY 523
Query: 209 GPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFD 268
GPPG GKTLLA+A+AN A FI + G EL+ + GE VR++F AR+ C++FFD
Sbjct: 524 GPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFD 583
Query: 269 EVDAIGGARFDDGVGGDN--EVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLR 326
E+D+I AR G GGD R + +++ ++DG +A+ N+ ++ ATNRPD +DPA+LR
Sbjct: 584 ELDSIAKAR-GGGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLR 642
Query: 327 PGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSR 368
PGRLD+ + LPD SR QI K R +D+ L++
Sbjct: 643 PGRLDQLIYIPLPDEASRHQILKASLRKTPLSKDLDLTFLAK 684
Score = 462 (167.7 bits), Expect = 4.4e-43, P = 4.4e-43
Identities = 89/225 (39%), Positives = 139/225 (61%)
Query: 151 DPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGP 210
DP E D+ Y+D+GG ++Q+ +++E+VELP+ HP+ F +GI PP+G+L +GP
Sbjct: 193 DPIKREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGP 252
Query: 211 PGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEV 270
PGTGKTL+ARAVAN T + F + G E++ K GE +R+ F+ + I+F DE+
Sbjct: 253 PGTGKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEI 312
Query: 271 DAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRL 330
DAI R + G+ E +R + +++ +DG R N+ V+ ATNRP+++D AL R GR
Sbjct: 313 DAIAPKR--EKTNGEVE-RRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRF 369
Query: 331 DRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
DR+++ G+PD R +I +IHT+ M D+ E ++ C G
Sbjct: 370 DREIDIGIPDAVGRLEILRIHTKNMKLADDVDLEQIANECHGFVG 414
>UNIPROTKB|P54811 [details] [associations]
symbol:cdc-48.1 "Transitional endoplasmic reticulum ATPase
homolog 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0007126 GO:GO:0002119 GO:GO:0040011 GO:GO:0040018
GO:GO:0016887 GO:GO:0000910 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0030968 GO:GO:0040002 HOGENOM:HOG000223224 KO:K13525
OMA:QIANECH InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z49886 PIR:T18970
RefSeq:NP_496273.1 ProteinModelPortal:P54811 SMR:P54811
DIP:DIP-26650N IntAct:P54811 MINT:MINT-1061999 STRING:P54811
PaxDb:P54811 PRIDE:P54811 EnsemblMetazoa:C06A1.1.1
EnsemblMetazoa:C06A1.1.2 GeneID:174624 KEGG:cel:CELE_C06A1.1
UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1 InParanoid:P54811
NextBio:884814 Uniprot:P54811
Length = 809
Score = 486 (176.1 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 95/222 (42%), Positives = 141/222 (63%)
Query: 149 KIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCY 208
K PS V E P+ T++D+GG + +++E+V+ P+ HPEK++K G+ P +GVL Y
Sbjct: 464 KSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFY 523
Query: 209 GPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFD 268
GPPG GKTLLA+A+AN A FI + G EL+ + GE VR++F AR+ C++FFD
Sbjct: 524 GPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFD 583
Query: 269 EVDAIGGARFDDGVGGDN--EVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLR 326
E+D+I AR G GGD R + +++ ++DG +A+ N+ ++ ATNRPD +DPA+LR
Sbjct: 584 ELDSIAKAR-GGGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLR 642
Query: 327 PGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSR 368
PGRLD+ + LPD SR QI K R +D+ L++
Sbjct: 643 PGRLDQLIYIPLPDEASRHQILKASLRKTPLSKDLDLTFLAK 684
Score = 462 (167.7 bits), Expect = 4.4e-43, P = 4.4e-43
Identities = 89/225 (39%), Positives = 139/225 (61%)
Query: 151 DPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGP 210
DP E D+ Y+D+GG ++Q+ +++E+VELP+ HP+ F +GI PP+G+L +GP
Sbjct: 193 DPIKREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGP 252
Query: 211 PGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEV 270
PGTGKTL+ARAVAN T + F + G E++ K GE +R+ F+ + I+F DE+
Sbjct: 253 PGTGKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEI 312
Query: 271 DAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRL 330
DAI R + G+ E +R + +++ +DG R N+ V+ ATNRP+++D AL R GR
Sbjct: 313 DAIAPKR--EKTNGEVE-RRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRF 369
Query: 331 DRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
DR+++ G+PD R +I +IHT+ M D+ E ++ C G
Sbjct: 370 DREIDIGIPDAVGRLEILRIHTKNMKLADDVDLEQIANECHGFVG 414
>UNIPROTKB|Q3AFJ8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 RefSeq:YP_359086.1
ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8 STRING:Q3AFJ8 MEROPS:M41.021
GeneID:3726212 KEGG:chy:CHY_0214 PATRIC:21273609 OMA:TGKADDE
BioCyc:CHYD246194:GJCN-215-MONOMER Uniprot:Q3AFJ8
Length = 619
Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
Identities = 95/216 (43%), Positives = 137/216 (63%)
Query: 160 EEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLA 219
+EK VT+ DV G E E++ E+VE + +P K+ +LG PKGVL +G PGTGKTLLA
Sbjct: 150 DEKKRVTFADVAGIDEVKEELAEIVEF-LKNPRKYNELGARIPKGVLLFGQPGTGKTLLA 208
Query: 220 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFD 279
RA+A F + GS+ V+ +VG GA VR+LF+ A+ CIVF DE+DA+G R
Sbjct: 209 RAIAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEIDAVGRQRGA 268
Query: 280 DGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLP 339
GG +E ++T+ +++ ++DGF++ I ++ ATNRPD LDPALLRPGR DR + P
Sbjct: 269 GLGGGHDEREQTLNQLLVEMDGFNSNEGIIIIAATNRPDILDPALLRPGRFDRHIVVDTP 328
Query: 340 DLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
D+ R +I K+H + D+ ++L+R P TG
Sbjct: 329 DINGRKEILKVHVKGKPLGDDVDLDVLARRTPGFTG 364
>TIGR_CMR|CHY_0214 [details] [associations]
symbol:CHY_0214 "cell division protein FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
RefSeq:YP_359086.1 ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8
STRING:Q3AFJ8 MEROPS:M41.021 GeneID:3726212 KEGG:chy:CHY_0214
PATRIC:21273609 OMA:TGKADDE BioCyc:CHYD246194:GJCN-215-MONOMER
Uniprot:Q3AFJ8
Length = 619
Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
Identities = 95/216 (43%), Positives = 137/216 (63%)
Query: 160 EEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLA 219
+EK VT+ DV G E E++ E+VE + +P K+ +LG PKGVL +G PGTGKTLLA
Sbjct: 150 DEKKRVTFADVAGIDEVKEELAEIVEF-LKNPRKYNELGARIPKGVLLFGQPGTGKTLLA 208
Query: 220 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFD 279
RA+A F + GS+ V+ +VG GA VR+LF+ A+ CIVF DE+DA+G R
Sbjct: 209 RAIAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEIDAVGRQRGA 268
Query: 280 DGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLP 339
GG +E ++T+ +++ ++DGF++ I ++ ATNRPD LDPALLRPGR DR + P
Sbjct: 269 GLGGGHDEREQTLNQLLVEMDGFNSNEGIIIIAATNRPDILDPALLRPGRFDRHIVVDTP 328
Query: 340 DLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
D+ R +I K+H + D+ ++L+R P TG
Sbjct: 329 DINGRKEILKVHVKGKPLGDDVDLDVLARRTPGFTG 364
>TAIR|locus:2052806 [details] [associations]
symbol:VAR2 "VARIEGATED 2" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0008237 "metallopeptidase activity"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010027
"thylakoid membrane organization" evidence=RCA;IMP] [GO:0009507
"chloroplast" evidence=IDA] [GO:0010205 "photoinhibition"
evidence=IMP] [GO:0031977 "thylakoid lumen" evidence=IDA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009579
"thylakoid" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA;TAS]
[GO:0016020 "membrane" evidence=IDA] [GO:0030163 "protein catabolic
process" evidence=IDA] [GO:0072593 "reactive oxygen species
metabolic process" evidence=IDA] [GO:0009534 "chloroplast
thylakoid" evidence=IDA] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0009902 "chloroplast relocation" evidence=RCA] [GO:0010207
"photosystem II assembly" evidence=RCA] [GO:0034660 "ncRNA
metabolic process" evidence=RCA] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA] [GO:0042744 "hydrogen peroxide
catabolic process" evidence=RCA] [GO:0042793 "transcription from
plastid promoter" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0010206
"photosystem II repair" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0006508
GO:GO:0009941 GO:GO:0008237 GO:GO:0004222 EMBL:AC004669
GO:GO:0010027 GO:GO:0072593 GO:GO:0010205 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0031977
GO:GO:0004176 GO:GO:0010206 HOGENOM:HOG000217276 KO:K03798
GO:GO:0010304 EMBL:AF135189 EMBL:AY045599 EMBL:AY093791
EMBL:AK221155 IPI:IPI00546467 PIR:F84714 RefSeq:NP_850156.1
UniGene:At.22024 UniGene:At.71129 UniGene:At.75189
ProteinModelPortal:O80860 SMR:O80860 IntAct:O80860 STRING:O80860
MEROPS:M41.005 World-2DPAGE:0003:O80860 PaxDb:O80860 PRIDE:O80860
ProMEX:O80860 EnsemblPlants:AT2G30950.1 GeneID:817646
KEGG:ath:AT2G30950 GeneFarm:2504 TAIR:At2g30950 InParanoid:O80860
OMA:LEIIAMR PhylomeDB:O80860 ProtClustDB:CLSN2679937
Genevestigator:O80860 Uniprot:O80860
Length = 695
Score = 479 (173.7 bits), Expect = 1.7e-45, P = 1.7e-45
Identities = 97/230 (42%), Positives = 138/230 (60%)
Query: 147 PPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVL 206
P + S +E VT++DV G E + EVVE + PE+F +G PKGVL
Sbjct: 206 PLQFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGAKIPKGVL 264
Query: 207 CYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVF 266
GPPGTGKTLLA+A+A F + GSE V+ +VG GA VR+LF+ A+ CIVF
Sbjct: 265 LIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVF 324
Query: 267 FDEVDAIGGARFDDGVGGDN-EVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALL 325
DE+DA+G R G+GG N E ++T+ +++ ++DGF+ + V+ ATNR D LD ALL
Sbjct: 325 VDEIDAVGRQR-GTGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALL 383
Query: 326 RPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
RPGR DR+V +PD++ RT I K+H + D+ E+++ P +G
Sbjct: 384 RPGRFDRQVSVDVPDVKGRTDILKVHAGNKKFDNDVSLEIIAMRTPGFSG 433
>TIGR_CMR|CJE_1259 [details] [associations]
symbol:CJE_1259 "cell division protein FtsH"
species:195099 "Campylobacter jejuni RM1221" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
OMA:RARASMP RefSeq:YP_179247.1 ProteinModelPortal:Q5HTY8 SMR:Q5HTY8
STRING:Q5HTY8 GeneID:3231766 KEGG:cjr:CJE1259 PATRIC:20044314
ProtClustDB:CLSK872348 BioCyc:CJEJ195099:GJC0-1285-MONOMER
Uniprot:Q5HTY8
Length = 645
Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
Identities = 95/217 (43%), Positives = 142/217 (65%)
Query: 161 EKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLAR 220
EKP V ++DV G +E E+++E+V+ + +PE+++KLG PKG+L GPPGTGKTLLA+
Sbjct: 171 EKPKVKFSDVAGVEEAKEEVKEIVDF-LKYPERYIKLGAKIPKGLLLVGPPGTGKTLLAK 229
Query: 221 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDD 280
AVA D F V GS ++ +VG GA VR+LF+ A+ + IVF DE+DAIG +R
Sbjct: 230 AVAGEADVPFFSVSGSSFIEMFVGVGASRVRDLFENAKKEAPAIVFIDEIDAIGKSRAAS 289
Query: 281 GV-GGDNEVQRTMLEIVNQLDGFDARGN-IKVLMATNRPDTLDPALLRPGRLDRKVEFGL 338
G+ GG++E ++T+ +++ ++DGF + + VL ATNRP+ LD ALLRPGR DR+V
Sbjct: 290 GMMGGNDEREQTLNQLLAEMDGFGTESSPVIVLAATNRPEVLDAALLRPGRFDRQVLVDK 349
Query: 339 PDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
PD + R I K+H + + ++ E ++RL G
Sbjct: 350 PDFKGRCDILKVHMKDVKISPKVKVEDIARLTAGLAG 386
>TAIR|locus:2009235 [details] [associations]
symbol:FTSH8 "FTSH protease 8" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IEA;IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=TAS] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 EMBL:AC007592
eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535
GO:GO:0004176 HOGENOM:HOG000217276 KO:K03798 GO:GO:0010304
ProtClustDB:CLSN2679937 EMBL:AF419565 EMBL:BT002649 EMBL:BT003813
EMBL:AY045951 IPI:IPI00539195 RefSeq:NP_563766.3 UniGene:At.17054
ProteinModelPortal:Q8W585 SMR:Q8W585 STRING:Q8W585 MEROPS:M41.025
PaxDb:Q8W585 PRIDE:Q8W585 ProMEX:Q8W585 EnsemblPlants:AT1G06430.1
GeneID:837154 KEGG:ath:AT1G06430 GeneFarm:2474 TAIR:At1g06430
InParanoid:Q8W585 OMA:NANADEQ PhylomeDB:Q8W585
Genevestigator:Q8W585 Uniprot:Q8W585
Length = 685
Score = 477 (173.0 bits), Expect = 2.4e-45, P = 2.4e-45
Identities = 98/230 (42%), Positives = 139/230 (60%)
Query: 147 PPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVL 206
P +I S +E VT++DV G E + EVVE + PE+F +G PKGVL
Sbjct: 199 PLQIGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVL 257
Query: 207 CYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVF 266
GPPGTGKTLLA+A+A F + GSE V+ +VG GA VR+LF+ A+ CIVF
Sbjct: 258 LVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVF 317
Query: 267 FDEVDAIGGARFDDGVGGDN-EVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALL 325
DE+DA+G R G+GG N E ++T+ +++ ++DGF+ + V+ ATNR D LD ALL
Sbjct: 318 VDEIDAVGRQR-GTGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALL 376
Query: 326 RPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
RPGR DR+V +PD++ RT I K+H+ E + E+++ P +G
Sbjct: 377 RPGRFDRQVSVDVPDVKGRTDILKVHSGNKKFESGVSLEVIAMRTPGFSG 426
>ZFIN|ZDB-GENE-060312-22 [details] [associations]
symbol:zgc:136908 "zgc:136908" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 ZFIN:ZDB-GENE-060312-22
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 HOGENOM:HOG000223224
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 HOVERGEN:HBG001226 EMBL:CU571167
EMBL:BC114306 IPI:IPI00835697 RefSeq:NP_001035017.1
UniGene:Dr.47664 SMR:Q29RA2 STRING:Q29RA2
Ensembl:ENSDART00000100551 GeneID:563679 KEGG:dre:563679
InParanoid:Q29RA2 OrthoDB:EOG4WWRMB NextBio:20885016 Uniprot:Q29RA2
Length = 805
Score = 481 (174.4 bits), Expect = 3.6e-45, P = 3.6e-45
Identities = 101/263 (38%), Positives = 155/263 (58%)
Query: 115 VVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCK 174
++ L D D+ + V +D K+ + + +PS TV E P V + D+GG
Sbjct: 431 LIDLEDDSIDADLLNSLAVTMDDFKWALS-----QSNPSALRETVVEVPHVNWEDIGGLD 485
Query: 175 EQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVI 234
E +++E+V+ P+ +P+KF+K G+ P +GVL YGPPG GKTLLA+A+AN A F+ +
Sbjct: 486 EVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIANECQANFVSIK 545
Query: 235 GSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGD--NEVQRTM 292
G EL+ + GE VR++F AR CI+FFDE+D+I AR G GD R +
Sbjct: 546 GPELLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKAR--GGGAGDAGGAADRVI 603
Query: 293 LEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHT 352
+I+ ++DG + N+ ++ ATNRPD +DPA+LRPGRLD+ + LPD+ SRT I + +
Sbjct: 604 NQILTEMDGMTNKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDMPSRTAILRANL 663
Query: 353 RTMNCERDIRFELLSRLCPNSTG 375
R +D+ LS++ +G
Sbjct: 664 RKSPVAKDVDLMYLSKITEGFSG 686
Score = 470 (170.5 bits), Expect = 5.8e-44, P = 5.8e-44
Identities = 88/208 (42%), Positives = 135/208 (64%)
Query: 160 EEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLA 219
E D+ Y+D+GGC++Q+ +++E+VELP+ HP F +G+ PP+G+L YGPPGTGKTL+A
Sbjct: 198 ESLNDIGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLVA 257
Query: 220 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFD 279
RAVAN T A F + G E++ K GE +R+ F+ A I+F DE+DAI R
Sbjct: 258 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR-- 315
Query: 280 DGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLP 339
+ G+ E +R + +++ +DG R ++ V+ ATNRP+++D AL R GR DR+++ G+P
Sbjct: 316 EKTHGEVE-RRIVSQLLTLMDGLKQRAHVVVMAATNRPNSVDAALRRFGRFDREIDIGIP 374
Query: 340 DLESRTQIFKIHTRTMNCERDIRFELLS 367
D R +I +IHT+ M D+ E +S
Sbjct: 375 DSTGRLEILQIHTKNMKLSEDVDLEQIS 402
>WB|WBGene00008053 [details] [associations]
symbol:cdc-48.2 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 481 (174.4 bits), Expect = 3.7e-45, P = 3.7e-45
Identities = 95/222 (42%), Positives = 140/222 (63%)
Query: 149 KIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCY 208
K PS V E P+ T++D+GG + +++E+V+ P+ HPEK++K G+ P +GVL Y
Sbjct: 463 KSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFY 522
Query: 209 GPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFD 268
GPPG GKTLLA+A+AN A FI + G EL+ + GE VR++F AR+ C++FFD
Sbjct: 523 GPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFD 582
Query: 269 EVDAIGGARFDDGVGGD--NEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLR 326
E+D+I AR G GD R + +++ ++DG +A+ N+ ++ ATNRPD +DPA+LR
Sbjct: 583 ELDSIAKAR--GGSVGDAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLR 640
Query: 327 PGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSR 368
PGRLD+ + LPD SR QIFK R D+ L++
Sbjct: 641 PGRLDQLIYIPLPDEASRLQIFKASLRKTPLSADLDLNFLAK 682
Score = 451 (163.8 bits), Expect = 7.1e-42, P = 7.1e-42
Identities = 88/225 (39%), Positives = 137/225 (60%)
Query: 151 DPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGP 210
DP E +V Y+D+GG ++Q+ +++E+VELP+ HP+ F +G+ PP+G+L +GP
Sbjct: 192 DPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGP 251
Query: 211 PGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEV 270
PGTGKTL+ARAVAN T A F + G E++ K GE +R+ F I+F DE+
Sbjct: 252 PGTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEI 311
Query: 271 DAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRL 330
DAI R + G+ E +R + +++ +DG R ++ V+ ATNRP+++D AL R GR
Sbjct: 312 DAIAPKR--EKAHGEVE-KRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRF 368
Query: 331 DRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
DR+++ G+PD R +I +IHT+ M D+ E ++ C G
Sbjct: 369 DREIDIGIPDAVGRLEILRIHTKNMKLGEDVDLEQVANECHGFVG 413
>UNIPROTKB|P54812 [details] [associations]
symbol:cdc-48.2 "Transitional endoplasmic reticulum ATPase
homolog 2" species:6239 "Caenorhabditis elegans" [GO:0042802
"identical protein binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 481 (174.4 bits), Expect = 3.7e-45, P = 3.7e-45
Identities = 95/222 (42%), Positives = 140/222 (63%)
Query: 149 KIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCY 208
K PS V E P+ T++D+GG + +++E+V+ P+ HPEK++K G+ P +GVL Y
Sbjct: 463 KSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFY 522
Query: 209 GPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFD 268
GPPG GKTLLA+A+AN A FI + G EL+ + GE VR++F AR+ C++FFD
Sbjct: 523 GPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFD 582
Query: 269 EVDAIGGARFDDGVGGD--NEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLR 326
E+D+I AR G GD R + +++ ++DG +A+ N+ ++ ATNRPD +DPA+LR
Sbjct: 583 ELDSIAKAR--GGSVGDAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLR 640
Query: 327 PGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSR 368
PGRLD+ + LPD SR QIFK R D+ L++
Sbjct: 641 PGRLDQLIYIPLPDEASRLQIFKASLRKTPLSADLDLNFLAK 682
Score = 451 (163.8 bits), Expect = 7.1e-42, P = 7.1e-42
Identities = 88/225 (39%), Positives = 137/225 (60%)
Query: 151 DPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGP 210
DP E +V Y+D+GG ++Q+ +++E+VELP+ HP+ F +G+ PP+G+L +GP
Sbjct: 192 DPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGP 251
Query: 211 PGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEV 270
PGTGKTL+ARAVAN T A F + G E++ K GE +R+ F I+F DE+
Sbjct: 252 PGTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEI 311
Query: 271 DAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRL 330
DAI R + G+ E +R + +++ +DG R ++ V+ ATNRP+++D AL R GR
Sbjct: 312 DAIAPKR--EKAHGEVE-KRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRF 368
Query: 331 DRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
DR+++ G+PD R +I +IHT+ M D+ E ++ C G
Sbjct: 369 DREIDIGIPDAVGRLEILRIHTKNMKLGEDVDLEQVANECHGFVG 413
>TIGR_CMR|CBU_1352 [details] [associations]
symbol:CBU_1352 "ATP-dependent metalloprotease FtsH"
species:227377 "Coxiella burnetii RSA 493" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HSSP:P28691 HOGENOM:HOG000217276 KO:K03798
MEROPS:M41.001 OMA:RSIIDQC RefSeq:NP_820341.1
ProteinModelPortal:Q83BY5 SMR:Q83BY5 PRIDE:Q83BY5 GeneID:1209258
KEGG:cbu:CBU_1352 PATRIC:17931447 ProtClustDB:CLSK914722
BioCyc:CBUR227377:GJ7S-1342-MONOMER Uniprot:Q83BY5
Length = 647
Score = 474 (171.9 bits), Expect = 4.4e-45, P = 4.4e-45
Identities = 95/229 (41%), Positives = 143/229 (62%)
Query: 147 PPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVL 206
P S + +++ VT++DV G E E+++E+VE + P KF +LG P GVL
Sbjct: 135 PMSFGRSKARLLSQDQVKVTFDDVAGVDEAKEEVKELVEF-LRDPGKFQRLGGKMPCGVL 193
Query: 207 CYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVF 266
GPPGTGKTLLA+AVA F + GS+ V+ +VG GA VR++F A+ + CI+F
Sbjct: 194 LVGPPGTGKTLLAKAVAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFDQAKKQAPCIIF 253
Query: 267 FDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLR 326
DE+DA+G R GG +E ++T+ +++ ++DGF+ + I V+ ATNRPD LDPALLR
Sbjct: 254 IDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFEGKEGIIVMAATNRPDVLDPALLR 313
Query: 327 PGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
PGR DR+V LPD++ R I K+H + +D++ +++R P +G
Sbjct: 314 PGRFDRQVVVPLPDIKGREYILKVHMNKLPLAKDVKASVIARGTPGFSG 362
>TIGR_CMR|GSU_1180 [details] [associations]
symbol:GSU_1180 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952233.1 ProteinModelPortal:Q74DY5 SMR:Q74DY5
GeneID:2686793 KEGG:gsu:GSU1180 PATRIC:22025134 OMA:VCQWGMS
ProtClustDB:CLSK828230 BioCyc:GSUL243231:GH27-1166-MONOMER
Uniprot:Q74DY5
Length = 617
Score = 474 (171.9 bits), Expect = 4.4e-45, P = 4.4e-45
Identities = 93/220 (42%), Positives = 139/220 (63%)
Query: 156 MMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGK 215
M T K VT++DV G + +++E+V+ + P+KF ++G PKGVL GPPGTGK
Sbjct: 163 MYTPSAKVKVTFDDVAGMENPKMELKEIVDY-LRDPKKFQRIGGKVPKGVLLVGPPGTGK 221
Query: 216 TLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGG 275
TLLARAVA D F+ + S+ ++ +VG GA VR+LF A+ I+F DE+DA+G
Sbjct: 222 TLLARAVAGEADVTFLSISASQFIEMFVGVGAGRVRDLFATAKKSAPSIIFIDELDAVGR 281
Query: 276 ARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVE 335
+R GG +E ++T+ ++++++DGFD+ + V+ ATNRPD LDPALLRPGR DR V
Sbjct: 282 SRGAGLGGGHDEREQTLNQLLSEMDGFDSHDEVIVMAATNRPDVLDPALLRPGRFDRHVV 341
Query: 336 FGLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
PD R +I +HTR + ++D+ +++R P G
Sbjct: 342 IDRPDWRDREKILHVHTRKIPLDKDVDLAVIARGTPGMAG 381
>FB|FBgn0261014 [details] [associations]
symbol:TER94 "TER94" species:7227 "Drosophila melanogaster"
[GO:0045169 "fusome" evidence=IDA;NAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005783 "endoplasmic reticulum" evidence=NAS] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0007317 "regulation of pole
plasm oskar mRNA localization" evidence=IMP] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=ISS] [GO:0000226
"microtubule cytoskeleton organization" evidence=IMP] [GO:0007029
"endoplasmic reticulum organization" evidence=IMP] [GO:0045451
"pole plasm oskar mRNA localization" evidence=IMP] [GO:0008103
"oocyte microtubule cytoskeleton polarization" evidence=IMP]
[GO:0008104 "protein localization" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IMP] [GO:0006200 "ATP catabolic process"
evidence=IGI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0043523 "regulation of neuron apoptotic process" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 EMBL:AE013599 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005875 GO:GO:0000226
GO:GO:0030154 GO:GO:0005811 GO:GO:0006810 GO:GO:0006200
GO:GO:0048477 GO:GO:0030433 GO:GO:0000502 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 GO:GO:0007030
GO:GO:0007029 GO:GO:0016320 GO:GO:0045169 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 GO:GO:0007317 EMBL:AF047037
EMBL:AF202034 EMBL:AF132553 RefSeq:NP_001097249.1
RefSeq:NP_001097250.1 RefSeq:NP_477369.1 UniGene:Dm.2968
ProteinModelPortal:Q7KN62 SMR:Q7KN62 IntAct:Q7KN62 STRING:Q7KN62
PaxDb:Q7KN62 PRIDE:Q7KN62 EnsemblMetazoa:FBtr0088391 GeneID:36040
KEGG:dme:Dmel_CG2331 UCSC:CG2331-RA CTD:36040 FlyBase:FBgn0261014
InParanoid:Q7KN62 OMA:RRGTDVN OrthoDB:EOG4TX96S GenomeRNAi:36040
NextBio:796507 Bgee:Q7KN62 Uniprot:Q7KN62
Length = 801
Score = 479 (173.7 bits), Expect = 5.8e-45, P = 5.8e-45
Identities = 93/227 (40%), Positives = 142/227 (62%)
Query: 149 KIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCY 208
K PS TV E P+ T+ D+GG + ++++E+V+ P+ HP+KF+K G+ P +GVL Y
Sbjct: 455 KSSPSALRETVVEVPNTTWTDIGGLESVKKELQELVQYPVEHPDKFLKFGMQPSRGVLFY 514
Query: 209 GPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFD 268
GPPG GKTLLA+A+AN A FI V G EL+ + GE VR++F ARS C++FFD
Sbjct: 515 GPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSAAPCVLFFD 574
Query: 269 EVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPG 328
E+D+I AR + R + +I+ ++DG A+ N+ ++ ATNRPD +DPA+LRPG
Sbjct: 575 ELDSIAKARGGNVGDAGGAADRVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPG 634
Query: 329 RLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
RLD+ + LPD +SR I K + R +++ ++++ +G
Sbjct: 635 RLDQLIYIPLPDDKSREAILKANLRKSPLAKEVDLTYIAKVTQGFSG 681
Score = 470 (170.5 bits), Expect = 5.7e-44, P = 5.7e-44
Identities = 86/203 (42%), Positives = 133/203 (65%)
Query: 165 VTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVAN 224
V Y+D+GGC++Q+ +++E+VELP+ HP F +G+ PP+G+L YGPPGTGKTL+ARAVAN
Sbjct: 198 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 257
Query: 225 RTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGG 284
T A F + G E++ K GE +R+ F+ A I+F DE+DAI R D G
Sbjct: 258 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDAIAPKR--DKTHG 315
Query: 285 DNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESR 344
+ E +R + +++ +DG ++ V+ ATNRP+++DPAL R GR DR+++ G+PD R
Sbjct: 316 EVE-RRIVSQLLTLMDGMKKSSHLIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGR 374
Query: 345 TQIFKIHTRTMNCERDIRFELLS 367
++ +IHT+ M D+ E ++
Sbjct: 375 LEVLRIHTKNMKLHDDVDLEQIA 397
>DICTYBASE|DDB_G0278435 [details] [associations]
symbol:DDB_G0278435 "AAA ATPase domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0278435 GO:GO:0005524 EMBL:AAFI02000023
GO:GO:0016887 eggNOG:COG0464 KO:K14575 InterPro:IPR009010
SUPFAM:SSF50692 RefSeq:XP_642364.1 ProteinModelPortal:Q54Y38
EnsemblProtists:DDB0237527 GeneID:8621569 KEGG:ddi:DDB_G0278435
InParanoid:Q54Y38 OMA:TSICREA Uniprot:Q54Y38
Length = 886
Score = 469 (170.2 bits), Expect = 6.0e-45, Sum P(2) = 6.0e-45
Identities = 92/227 (40%), Positives = 141/227 (62%)
Query: 149 KIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCY 208
++ PS V E P V + D+GG + +K++E +E P+ +P+ F+++GI PPKG+L Y
Sbjct: 603 QVKPSSMREVVVEIPKVFWGDIGGQEHIKQKLKEAIEWPLKYPQSFIRMGIKPPKGILLY 662
Query: 209 GPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFD 268
GPPG KTLLA+A+A + FI V G EL+ K+VGE R VR++F+ AR I+FFD
Sbjct: 663 GPPGCSKTLLAKALATESGLNFIAVKGPELLSKWVGESERAVRDIFKKARQNSPSILFFD 722
Query: 269 EVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPG 328
E+D + +R +G G V+R + +++ ++DG N+ ++ ATNRPD +D A+LR G
Sbjct: 723 EIDGLAISRSGEGSGA---VERVVSQLLTEMDGIQPLTNVTIIGATNRPDIIDKAILRAG 779
Query: 329 RLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
R+DR + PDL++R +IF IH + + DI LS L +G
Sbjct: 780 RIDRILYISPPDLDARKEIFNIHLKKVPHSSDIDINQLSILTDGYSG 826
Score = 246 (91.7 bits), Expect = 6.4e-25, Sum P(2) = 6.4e-25
Identities = 47/139 (33%), Positives = 87/139 (62%)
Query: 164 DVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVA 223
++ + +GG Q++++RE+++L + G+ PPKG+L YGPPGTGKTLLAR VA
Sbjct: 308 NLNFQSIGGLDLQVKQIRELIDLSFYKLDLLKSFGVKPPKGILLYGPPGTGKTLLARIVA 367
Query: 224 NRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVG 283
+T+A + G++++ K+ G + ++++F+ A K I+F DE+DA+ R D+
Sbjct: 368 TQTNATLFTINGADILDKFYGMTEKTLQKIFKDAAQKSPSIIFIDELDALCPKREDNS-- 425
Query: 284 GDNEVQRTML-EIVNQLDG 301
+EV++ ++ ++ +DG
Sbjct: 426 --SEVEKRIVGSLLTLMDG 442
Score = 112 (44.5 bits), Expect = 6.4e-25, Sum P(2) = 6.4e-25
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 306 GNIKVLM--ATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKI 350
G KV++ TNRPD++D AL RPGR D ++E +P+ + R QI I
Sbjct: 465 GGDKVIVIGCTNRPDSIDSALRRPGRFDNEIEISIPNQQGREQILNI 511
Score = 37 (18.1 bits), Expect = 6.0e-45, Sum P(2) = 6.0e-45
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 34 YSTSIKKAEKEIKDMAKKVNDLCGIKESD 62
Y + K +K KD A+K + I E D
Sbjct: 387 YGMTEKTLQKIFKDAAQKSPSIIFIDELD 415
>GENEDB_PFALCIPARUM|PFF0940c [details] [associations]
symbol:PFF0940c "cell division cycle protein 48
homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 478 (173.3 bits), Expect = 8.9e-45, P = 8.9e-45
Identities = 91/209 (43%), Positives = 137/209 (65%)
Query: 160 EEKPD-VTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLL 218
EEK D + Y+D+GGCK+Q+ ++RE++ELP+ HP F LG+ PP+GVL YGPPG+GKT +
Sbjct: 198 EEKLDEIGYDDIGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCI 257
Query: 219 ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARF 278
ARAVAN T A F + G E++ K GE +R F+ A I+F DE+D+I R
Sbjct: 258 ARAVANETGAFFFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSIAPKR- 316
Query: 279 DDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGL 338
+ G+ E +R + +++ +DG +RG + V+ ATNR +++DPAL R GR DR+++ G+
Sbjct: 317 -EKTNGEVE-RRVVSQLLTLMDGIKSRGQVVVIAATNRQNSIDPALRRFGRFDREIDIGV 374
Query: 339 PDLESRTQIFKIHTRTMNCERDIRFELLS 367
PD R +I +IHT+ M D++ E L+
Sbjct: 375 PDDNGRFEILRIHTKNMKLSPDVKLEELA 403
Score = 449 (163.1 bits), Expect = 1.3e-41, P = 1.3e-41
Identities = 102/265 (38%), Positives = 153/265 (57%)
Query: 115 VVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCK 174
V+ L D++ ++ E M V D + + + +PS TV E P+V ++D+GG
Sbjct: 432 VIDLEDEIIDKEVLESMCVTQDH--FNMALGT---CNPSSLRETVVEVPNVKWDDIGGLD 486
Query: 175 EQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVI 234
E +RE++ P+ HP+KF K G+ P +GVL YGPPG GKTLLA+AVA+ A F+ +
Sbjct: 487 EVKSTLREMILYPIDHPDKFEKFGMSPSRGVLFYGPPGCGKTLLAKAVASECSANFVSIK 546
Query: 235 GSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIG---GARFDDGVG-GDNEVQR 290
G EL+ + GE VRE+F AR+ C++FFDE+D+IG G+ DG G GD R
Sbjct: 547 GPELLTMWFGESEANVREVFDKARAAAPCVLFFDELDSIGTQRGSSLGDGSGAGD----R 602
Query: 291 TMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKI 350
M +++ ++DG + N+ + ATNRP+ LD ALLRPGRLD+ + LPDL +R I
Sbjct: 603 VMNQLLTEIDGVGPKKNLFFIGATNRPELLDEALLRPGRLDQLIYIPLPDLGARISILTA 662
Query: 351 HTRTMNCERDIRFELLSRLCPNSTG 375
R ++ + L++ +G
Sbjct: 663 ILRKCPVAENVPIDFLAQKTAGFSG 687
>UNIPROTKB|C6KT34 [details] [associations]
symbol:PFF0940c "Cell division cycle protein 48 homologue,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 478 (173.3 bits), Expect = 8.9e-45, P = 8.9e-45
Identities = 91/209 (43%), Positives = 137/209 (65%)
Query: 160 EEKPD-VTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLL 218
EEK D + Y+D+GGCK+Q+ ++RE++ELP+ HP F LG+ PP+GVL YGPPG+GKT +
Sbjct: 198 EEKLDEIGYDDIGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCI 257
Query: 219 ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARF 278
ARAVAN T A F + G E++ K GE +R F+ A I+F DE+D+I R
Sbjct: 258 ARAVANETGAFFFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSIAPKR- 316
Query: 279 DDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGL 338
+ G+ E +R + +++ +DG +RG + V+ ATNR +++DPAL R GR DR+++ G+
Sbjct: 317 -EKTNGEVE-RRVVSQLLTLMDGIKSRGQVVVIAATNRQNSIDPALRRFGRFDREIDIGV 374
Query: 339 PDLESRTQIFKIHTRTMNCERDIRFELLS 367
PD R +I +IHT+ M D++ E L+
Sbjct: 375 PDDNGRFEILRIHTKNMKLSPDVKLEELA 403
Score = 449 (163.1 bits), Expect = 1.3e-41, P = 1.3e-41
Identities = 102/265 (38%), Positives = 153/265 (57%)
Query: 115 VVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCK 174
V+ L D++ ++ E M V D + + + +PS TV E P+V ++D+GG
Sbjct: 432 VIDLEDEIIDKEVLESMCVTQDH--FNMALGT---CNPSSLRETVVEVPNVKWDDIGGLD 486
Query: 175 EQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVI 234
E +RE++ P+ HP+KF K G+ P +GVL YGPPG GKTLLA+AVA+ A F+ +
Sbjct: 487 EVKSTLREMILYPIDHPDKFEKFGMSPSRGVLFYGPPGCGKTLLAKAVASECSANFVSIK 546
Query: 235 GSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIG---GARFDDGVG-GDNEVQR 290
G EL+ + GE VRE+F AR+ C++FFDE+D+IG G+ DG G GD R
Sbjct: 547 GPELLTMWFGESEANVREVFDKARAAAPCVLFFDELDSIGTQRGSSLGDGSGAGD----R 602
Query: 291 TMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKI 350
M +++ ++DG + N+ + ATNRP+ LD ALLRPGRLD+ + LPDL +R I
Sbjct: 603 VMNQLLTEIDGVGPKKNLFFIGATNRPELLDEALLRPGRLDQLIYIPLPDLGARISILTA 662
Query: 351 HTRTMNCERDIRFELLSRLCPNSTG 375
R ++ + L++ +G
Sbjct: 663 ILRKCPVAENVPIDFLAQKTAGFSG 687
>TIGR_CMR|BA_0064 [details] [associations]
symbol:BA_0064 "cell division protein FtsH" species:198094
"Bacillus anthracis str. Ames" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0051301 GO:GO:0046872
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0030163 HOGENOM:HOG000217277 TIGRFAMs:TIGR01241 KO:K03798
ProtClustDB:CLSK886567 HSSP:Q9LCZ4 OMA:QINMEEV RefSeq:NP_842633.1
RefSeq:YP_016667.1 RefSeq:YP_026351.1 ProteinModelPortal:Q81VX5
SMR:Q81VX5 IntAct:Q81VX5 DNASU:1086600
EnsemblBacteria:EBBACT00000009752 EnsemblBacteria:EBBACT00000016661
EnsemblBacteria:EBBACT00000022411 GeneID:1086600 GeneID:2819677
GeneID:2851579 KEGG:ban:BA_0064 KEGG:bar:GBAA_0064 KEGG:bat:BAS0064
BioCyc:BANT260799:GJAJ-73-MONOMER BioCyc:BANT261594:GJ7F-75-MONOMER
Uniprot:Q81VX5
Length = 633
Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 93/216 (43%), Positives = 133/216 (61%)
Query: 160 EEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLA 219
+EK V + DV G E+ +++ EVVE + P KF ++G PKGVL GPPGTGKTLLA
Sbjct: 154 DEKKKVRFRDVAGADEEKQELVEVVEF-LKDPRKFAEVGARIPKGVLLVGPPGTGKTLLA 212
Query: 220 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFD 279
RAVA F + GS+ V+ +VG GA VR+LF+ A+ CI+F DE+DA+G R
Sbjct: 213 RAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQRGA 272
Query: 280 DGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLP 339
GG +E ++T+ +++ ++DGF A I ++ ATNRPD LDPALLRPGR DR++ P
Sbjct: 273 GLGGGHDEREQTLNQLLVEMDGFGANEGIIIIAATNRPDILDPALLRPGRFDRQITVDRP 332
Query: 340 DLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
D+ R + K+H R + +I ++ P +G
Sbjct: 333 DVNGREAVLKVHARNKPLDENINLRAIATRTPGFSG 368
>ZFIN|ZDB-GENE-070912-46 [details] [associations]
symbol:afg3l2 "AFG3 ATPase family gene 3-like 2 (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-070912-46 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 GO:GO:0017111 TIGRFAMs:TIGR01241
CTD:10939 MEROPS:M41.007 EMBL:BX000484 EMBL:BC155655
IPI:IPI00513225 RefSeq:NP_001104667.1 UniGene:Dr.82691 SMR:A9JRG9
STRING:A9JRG9 Ensembl:ENSDART00000089834 GeneID:569168
KEGG:dre:569168 NextBio:20889547 Uniprot:A9JRG9
Length = 800
Score = 476 (172.6 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 92/214 (42%), Positives = 135/214 (63%)
Query: 155 TMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTG 214
T + ++ DV + DV GC+E ++ E V + +P+++ LG PKG + GPPGTG
Sbjct: 290 TAKVLRDEIDVKFKDVAGCEEAKLEIMEFVNF-LKNPKQYQDLGAKIPKGAILTGPPGTG 348
Query: 215 KTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIG 274
KTLLA+A A + FI V GSE ++ +VG G VR+LF +AR CI+F DE+DA+G
Sbjct: 349 KTLLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDLFVLARKNAPCILFIDEIDAVG 408
Query: 275 GARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKV 334
R GG +E + T+ +++ ++DGF+ N+ VL TNRPD LDPAL+RPGR DR++
Sbjct: 409 RKRGRGNFGGQSEQENTLNQLLVEMDGFNTATNVVVLAGTNRPDILDPALMRPGRFDRQI 468
Query: 335 EFGLPDLESRTQIFKIHTRTMNCERDIRFELLSR 368
G PD++ R IFK+H R + E ++ E L+R
Sbjct: 469 YIGPPDIKGRASIFKVHLRPLKLEAELDKEALAR 502
>TAIR|locus:2011952 [details] [associations]
symbol:FTSH1 "FTSH protease 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0031977
"thylakoid lumen" evidence=IDA] [GO:0010206 "photosystem II repair"
evidence=TAS] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=RCA;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0006098 "pentose-phosphate shunt" evidence=RCA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0007275
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 eggNOG:COG0465
TIGRFAMs:TIGR01241 GO:GO:0009535 GO:GO:0031977 GO:GO:0004176
GO:GO:0010206 EMBL:AC007980 EMBL:X99808 EMBL:AY091095 EMBL:AY123034
EMBL:Y12780 IPI:IPI00518805 PIR:G96538 RefSeq:NP_564563.1
UniGene:At.21777 ProteinModelPortal:Q39102 SMR:Q39102 STRING:Q39102
MEROPS:M41.020 PaxDb:Q39102 PRIDE:Q39102 EnsemblPlants:AT1G50250.1
GeneID:841447 KEGG:ath:AT1G50250 GeneFarm:2667 TAIR:At1g50250
HOGENOM:HOG000217276 InParanoid:Q39102 KO:K03798 OMA:GGNPAMN
PhylomeDB:Q39102 ProtClustDB:CLSN2688633 Genevestigator:Q39102
GermOnline:AT1G50250 GO:GO:0010304 Uniprot:Q39102
Length = 716
Score = 471 (170.9 bits), Expect = 2.1e-44, P = 2.1e-44
Identities = 98/219 (44%), Positives = 139/219 (63%)
Query: 160 EEKPD--VTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTL 217
+E P+ V++ DV G + +++EVV+ + +P+K+ LG PKG L GPPGTGKTL
Sbjct: 252 QEVPETGVSFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTL 310
Query: 218 LARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGAR 277
LARAVA F SE V+ +VG GA VR+LF+ A+SK CIVF DE+DA+G R
Sbjct: 311 LARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQR 370
Query: 278 FDDGVGGDN-EVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEF 336
G+GG N E ++T+ +++ ++DGF + VL ATNRPD LD ALLRPGR DR+V
Sbjct: 371 -GAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTV 429
Query: 337 GLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
PD+ R +I ++H+R +D+ F+ ++R P TG
Sbjct: 430 DRPDVAGRVKILQVHSRGKALGKDVDFDKVARRTPGFTG 468
>TAIR|locus:2831844 [details] [associations]
symbol:AtCDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
EMBL:AL162751 GO:GO:0051301 GO:GO:0005856 GO:GO:0015031
GO:GO:0007049 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0009524 UniGene:At.33291 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK117125 EMBL:AK118571 EMBL:BT006485
IPI:IPI00543476 RefSeq:NP_568114.1 ProteinModelPortal:Q9LZF6
SMR:Q9LZF6 IntAct:Q9LZF6 STRING:Q9LZF6 PRIDE:Q9LZF6
EnsemblPlants:AT5G03340.1 GeneID:831870 KEGG:ath:AT5G03340
GeneFarm:1899 TAIR:At5g03340 InParanoid:Q9LZF6 OMA:AYRPIHK
PhylomeDB:Q9LZF6 Genevestigator:Q9LZF6 GermOnline:AT5G03340
Uniprot:Q9LZF6
Length = 810
Score = 474 (171.9 bits), Expect = 2.2e-44, P = 2.2e-44
Identities = 94/225 (41%), Positives = 136/225 (60%)
Query: 151 DPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGP 210
+PS TV E P+V++ D+GG + +++E V+ P+ HPEKF K G+ P KGVL YGP
Sbjct: 463 NPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGP 522
Query: 211 PGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEV 270
PG GKTLLA+A+AN A FI V G EL+ + GE VRE+F AR C++FFDE+
Sbjct: 523 PGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDEL 582
Query: 271 DAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRL 330
D+I R + R + +++ ++DG +A+ + ++ ATNRPD +D ALLRPGRL
Sbjct: 583 DSIATQRGNSAGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRL 642
Query: 331 DRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
D+ + LPD +SR IFK R +D+ L++ +G
Sbjct: 643 DQLIYIPLPDEDSRLNIFKACLRKSPVAKDVDVTALAKYTQGFSG 687
Score = 471 (170.9 bits), Expect = 4.6e-44, P = 4.6e-44
Identities = 90/210 (42%), Positives = 140/210 (66%)
Query: 160 EEKPD-VTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLL 218
EE+ D V Y+DVGG ++Q+ ++RE+VELP+ HP+ F +G+ PPKG+L YGPPG+GKTL+
Sbjct: 198 EERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLI 257
Query: 219 ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARF 278
ARAVAN T A F + G E++ K GE +R+ F+ A I+F DE+D+I R
Sbjct: 258 ARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR- 316
Query: 279 DDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGL 338
+ G+ E +R + +++ +DG +R ++ V+ ATNRP+++DPAL R GR DR+++ G+
Sbjct: 317 -EKTNGEVE-RRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGV 374
Query: 339 PDLESRTQIFKIHTRTMNCERDIRFELLSR 368
PD R ++ +IHT+ M D+ E +S+
Sbjct: 375 PDEIGRLEVLRIHTKNMKLAEDVDLERISK 404
>UNIPROTKB|I3LLQ8 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0006508 GO:GO:0040014 GO:GO:0004222 GO:GO:0042552
GO:GO:0007409 GO:GO:0030163 GeneTree:ENSGT00530000063070
GO:GO:0017111 GO:GO:0042407 GO:GO:0008053 GO:GO:0034982
TIGRFAMs:TIGR01241 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675
GO:GO:0060013 EMBL:FP565334 Ensembl:ENSSSCT00000025900
Uniprot:I3LLQ8
Length = 597
Score = 467 (169.5 bits), Expect = 2.4e-44, P = 2.4e-44
Identities = 91/215 (42%), Positives = 135/215 (62%)
Query: 155 TMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGID-PPKGVLCYGPPGT 213
T ++++ DV + DV GC+E ++ E V + +P+++ LG P KG + GPPGT
Sbjct: 86 TAKVLKDEIDVKFKDVAGCEEAKLEIMEFVNF-LKNPKQYQDLGAKIPKKGAILTGPPGT 144
Query: 214 GKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAI 273
GKTLLA+A A + FI V GSE ++ +VG G VR+LF +AR CI+F DE+DA+
Sbjct: 145 GKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAV 204
Query: 274 GGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRK 333
G R GG +E + T+ +++ ++DGF+ N+ +L TNRPD LDPALLRPGR DR+
Sbjct: 205 GRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQ 264
Query: 334 VEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSR 368
+ G PD++ R IFK+H R + + + E L+R
Sbjct: 265 IFIGPPDIKGRASIFKVHLRPLKLDSTLEKEKLAR 299
>UNIPROTKB|Q2GIT4 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 467 (169.5 bits), Expect = 2.4e-44, P = 2.4e-44
Identities = 91/221 (41%), Positives = 142/221 (64%)
Query: 156 MMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGK 215
+MT + + VT++DV G +E E++ E+V+ + H +KF KLG PKG L G PGTGK
Sbjct: 147 LMT-DSRGKVTFDDVAGIEEAKEELIEIVDF-LKHRQKFTKLGGKIPKGCLLIGSPGTGK 204
Query: 216 TLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGG 275
TLLARA+A + F + GS+ V+ +VG GA VR++F+ + CI+F DE+DA+G
Sbjct: 205 TLLARAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHAPCIIFVDEIDAVGR 264
Query: 276 ARFDDGVGGDN-EVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKV 334
R G+GG N E ++T+ +++ ++DGF++ + ++ ATNRPD LDPALLRPGR DR+V
Sbjct: 265 HR-GIGLGGGNDEREQTLNQLLVEMDGFESNEGVVIIAATNRPDVLDPALLRPGRFDRQV 323
Query: 335 EFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
+PD+ R +I +H + + D+ +++R P +G
Sbjct: 324 TISIPDINGREKIIAVHAKKVPLAPDVDLRVIARGTPGFSG 364
>TIGR_CMR|APH_1179 [details] [associations]
symbol:APH_1179 "ATP-dependent metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0000910 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 467 (169.5 bits), Expect = 2.4e-44, P = 2.4e-44
Identities = 91/221 (41%), Positives = 142/221 (64%)
Query: 156 MMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGK 215
+MT + + VT++DV G +E E++ E+V+ + H +KF KLG PKG L G PGTGK
Sbjct: 147 LMT-DSRGKVTFDDVAGIEEAKEELIEIVDF-LKHRQKFTKLGGKIPKGCLLIGSPGTGK 204
Query: 216 TLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGG 275
TLLARA+A + F + GS+ V+ +VG GA VR++F+ + CI+F DE+DA+G
Sbjct: 205 TLLARAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHAPCIIFVDEIDAVGR 264
Query: 276 ARFDDGVGGDN-EVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKV 334
R G+GG N E ++T+ +++ ++DGF++ + ++ ATNRPD LDPALLRPGR DR+V
Sbjct: 265 HR-GIGLGGGNDEREQTLNQLLVEMDGFESNEGVVIIAATNRPDVLDPALLRPGRFDRQV 323
Query: 335 EFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
+PD+ R +I +H + + D+ +++R P +G
Sbjct: 324 TISIPDINGREKIIAVHAKKVPLAPDVDLRVIARGTPGFSG 364
>TIGR_CMR|GSU_1809 [details] [associations]
symbol:GSU_1809 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952859.2 GeneID:2688702 KEGG:gsu:GSU1809 PATRIC:22026473
ProtClustDB:CLSK828573 BioCyc:GSUL243231:GH27-1860-MONOMER
Uniprot:Q74C66
Length = 610
Score = 467 (169.5 bits), Expect = 2.4e-44, P = 2.4e-44
Identities = 93/219 (42%), Positives = 136/219 (62%)
Query: 157 MTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKT 216
+ E + VT+ DV G E E++ E+++ + P+KF KLG PKGVL GPPGTGKT
Sbjct: 142 LLTEAQGRVTFEDVAGVDEAKEELEEIIQF-LKDPKKFTKLGGRIPKGVLLVGPPGTGKT 200
Query: 217 LLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGA 276
LLARAVA F + GS+ V+ +VG GA VR+LF + CI+F DE+DA+G
Sbjct: 201 LLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFVQGKKNAPCIIFIDEIDAVGRH 260
Query: 277 RFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEF 336
R GG +E ++T+ +++ ++DGF++ + ++ ATNRPD LDPALLRPGR DR+V
Sbjct: 261 RGAGLGGGHDEREQTLNQLLVEMDGFESNEGVILIAATNRPDVLDPALLRPGRFDRQVVV 320
Query: 337 GLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
PD++ R I K+HT+ D+ +++R P +G
Sbjct: 321 PQPDVKGREMILKVHTKKTPLASDVDLGVIARGTPGFSG 359
>UNIPROTKB|Q2KJI7 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9913 "Bos
taurus" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0046872 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 MEROPS:M41.016
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
EMBL:BC105322 IPI:IPI00686580 RefSeq:NP_001039676.1 UniGene:Bt.1657
HSSP:Q9WZ49 ProteinModelPortal:Q2KJI7 SMR:Q2KJI7 STRING:Q2KJI7
PRIDE:Q2KJI7 Ensembl:ENSBTAT00000031029 GeneID:515757
KEGG:bta:515757 CTD:10939 InParanoid:Q2KJI7 OMA:LYRFVTT
NextBio:20871990 GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
Uniprot:Q2KJI7
Length = 805
Score = 472 (171.2 bits), Expect = 3.5e-44, P = 3.5e-44
Identities = 90/214 (42%), Positives = 135/214 (63%)
Query: 155 TMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTG 214
T ++++ DV + DV GC+E ++ E V + +P+++ LG PKG + GPPGTG
Sbjct: 296 TAKVLKDEIDVKFKDVAGCEEAKLEIMEFVNF-LKNPKQYQDLGAKIPKGAILTGPPGTG 354
Query: 215 KTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIG 274
KTLLA+A A + FI V GSE ++ +VG G VR+LF +AR CI+F DE+DA+G
Sbjct: 355 KTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVG 414
Query: 275 GARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKV 334
R GG +E + T+ +++ ++DGF+ N+ +L TNRPD LDPAL+RPGR DR++
Sbjct: 415 RKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQI 474
Query: 335 EFGLPDLESRTQIFKIHTRTMNCERDIRFELLSR 368
G PD++ R IFK+H R + + + E L+R
Sbjct: 475 FIGPPDIKGRASIFKVHLRPLKLDSTLEKEKLAR 508
>UNIPROTKB|F1N9N5 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
OMA:LYRFVTT EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00683486 Ensembl:ENSGALT00000016639 ArrayExpress:F1N9N5
Uniprot:F1N9N5
Length = 635
Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
Identities = 92/225 (40%), Positives = 138/225 (61%)
Query: 155 TMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTG 214
T ++++ DV + DV GC+E ++ E V + +P+++ LG PKG + GPPGTG
Sbjct: 139 TAKVLKDEIDVKFKDVAGCEEAKLEIMEFVNF-LKNPKQYEDLGAKIPKGAILTGPPGTG 197
Query: 215 KTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIG 274
KTLLA+A A + FI V GSE ++ +VG G VR+LF +AR CI+F DE+DA+G
Sbjct: 198 KTLLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVG 257
Query: 275 GARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKV 334
R GG +E + T+ +++ ++DGF+ N+ +L TNRPD LDPAL+RPGR DR++
Sbjct: 258 RKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQI 317
Query: 335 EFGLPDLESRTQIFKIHTRTMNCE----RDIRFELLSRLCPNSTG 375
G PD++ R IFK+H R + + +D L+ L P +G
Sbjct: 318 YIGPPDIKGRASIFKVHLRPLKLDTVLDKDNLARKLASLTPGFSG 362
>UNIPROTKB|Q8NB90 [details] [associations]
symbol:SPATA5 "Spermatogenesis-associated protein 5"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
GO:GO:0007275 GO:GO:0005739 GO:GO:0005524 GO:GO:0005737
GO:GO:0030154 GO:GO:0007283 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 KO:K14575 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 EMBL:AC021205
EMBL:AF361489 EMBL:AF479656 EMBL:AK091384 EMBL:AC026402
EMBL:AC097492 EMBL:AC109357 EMBL:BC048217 IPI:IPI00329583
IPI:IPI00890715 IPI:IPI00890727 RefSeq:NP_660208.2
UniGene:Hs.709648 ProteinModelPortal:Q8NB90 SMR:Q8NB90
IntAct:Q8NB90 STRING:Q8NB90 PhosphoSite:Q8NB90 DMDM:308153554
PaxDb:Q8NB90 PRIDE:Q8NB90 DNASU:166378 Ensembl:ENST00000274008
GeneID:166378 KEGG:hsa:166378 UCSC:uc003iey.3 UCSC:uc003iez.4
CTD:166378 GeneCards:GC04P123844 H-InvDB:HIX0022056 HGNC:HGNC:18119
HPA:HPA036451 MIM:613940 neXtProt:NX_Q8NB90 PharmGKB:PA38294
HOVERGEN:HBG108504 InParanoid:Q8NB90 OMA:NDIRPSA OrthoDB:EOG43FGWF
PhylomeDB:Q8NB90 GenomeRNAi:166378 NextBio:88589 Bgee:Q8NB90
CleanEx:HS_SPATA5 Genevestigator:Q8NB90 Uniprot:Q8NB90
Length = 893
Score = 473 (171.6 bits), Expect = 4.2e-44, P = 4.2e-44
Identities = 89/217 (41%), Positives = 137/217 (63%)
Query: 150 IDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYG 209
I PS + P+V+++D+GG + K+ + VE P+ HPE F+++GI PPKGVL YG
Sbjct: 609 IRPSAMREIAIDVPNVSWSDIGGLESIKLKLEQAVEWPLKHPESFIRMGIQPPKGVLLYG 668
Query: 210 PPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDE 269
PPG KT++A+A+AN + F+ + G EL+ KYVGE R VRE F+ AR+ I+FFDE
Sbjct: 669 PPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRETFRKARAVAPSIIFFDE 728
Query: 270 VDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGR 329
+DA+ R +G N R + +++ ++DG + ++ +L ATNRPD +D AL+RPGR
Sbjct: 729 LDALAVER-GSSLGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRPDRIDKALMRPGR 787
Query: 330 LDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELL 366
+DR + LPD +R +IFK+ +M ++ + L
Sbjct: 788 IDRIIYVPLPDAATRREIFKLQFHSMPVSNEVDLDEL 824
Score = 393 (143.4 bits), Expect = 1.8e-35, P = 1.8e-35
Identities = 82/190 (43%), Positives = 119/190 (62%)
Query: 165 VTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVAN 224
VTY+ +GG Q++ +RE++ELP+ PE F GI P+GVL YGPPGTGKT++ARAVAN
Sbjct: 350 VTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVAN 409
Query: 225 RTDACFIRVI-GSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVG 283
A ++ VI G E++ K+ GE +R++F A + I+F DE+DA+ R G
Sbjct: 410 EVGA-YVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPKR----EG 464
Query: 284 GDNEVQ-RTMLEIVNQLDGFDAR---GNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLP 339
NEV+ R + ++ +DG + G + VL ATNRP LD AL RPGR D+++E G+P
Sbjct: 465 AQNEVEKRVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVP 524
Query: 340 DLESRTQIFK 349
+ + R I +
Sbjct: 525 NAQDRLDILQ 534
>RGD|1309722 [details] [associations]
symbol:Afg3l1 "AFG3(ATPase family gene 3)-like 1 (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0007005 "mitochondrion
organization" evidence=ISO] [GO:0008053 "mitochondrial fusion"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=ISO] [GO:0042407
"cristae formation" evidence=ISO] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 RGD:1309722
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
IPI:IPI00365343 Ensembl:ENSRNOT00000065957 UCSC:RGD:1309722
ArrayExpress:F1LS61 Uniprot:F1LS61
Length = 761
Score = 470 (170.5 bits), Expect = 4.3e-44, P = 4.3e-44
Identities = 96/225 (42%), Positives = 138/225 (61%)
Query: 155 TMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTG 214
T ++ DV + DV GC+E ++ E V + +P+++ LG PKG + GPPGTG
Sbjct: 259 TAKILKNNIDVRFADVAGCEEAKLEIMEFVNF-LKNPKQYQDLGAKIPKGAMLTGPPGTG 317
Query: 215 KTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIG 274
KTLLA+A A FI V GSE ++ +VG G VR++F MAR CI+F DE+DAIG
Sbjct: 318 KTLLAKATAGEAKVPFITVNGSEFLEMFVGVGPARVRDMFAMARKHAPCILFIDEIDAIG 377
Query: 275 GARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKV 334
R +GG +E + T+ +++ ++DGF++ N+ VL TNRPD LDPAL RPGR DR++
Sbjct: 378 RKRGRGHLGGQSEQENTLNQMLVEMDGFNSTTNVVVLAGTNRPDILDPALTRPGRFDRQI 437
Query: 335 EFGLPDLESRTQIFKIHTRTMNCERDIRFELLSR----LCPNSTG 375
G PD++ R+ IFK+H R + + + + LSR L P TG
Sbjct: 438 YIGPPDIKGRSSIFKVHLRPLKLDESLTRDALSRKLAALTPGFTG 482
>WB|WBGene00010562 [details] [associations]
symbol:cdc-48.3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0040010 "positive regulation of growth
rate" evidence=IMP] [GO:0009792 "embryo development ending in birth
or egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0007091
"metaphase/anaphase transition of mitotic cell cycle" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0007067 "mitosis" evidence=IMP] [GO:0019901 "protein kinase
binding" evidence=IPI] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006469 "negative regulation of protein kinase activity"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006200
"ATP catabolic process" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0007052
GO:GO:0002119 GO:GO:0006469 GO:GO:0000003 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 HOGENOM:HOG000223225 GeneTree:ENSGT00700000104502
GO:GO:0007091 EMBL:Z75712 KO:K13525 PIR:T23322 RefSeq:NP_492211.1
ProteinModelPortal:Q21222 SMR:Q21222 PaxDb:Q21222
EnsemblMetazoa:K04G2.3 GeneID:172586 KEGG:cel:CELE_K04G2.3
UCSC:K04G2.3 CTD:172586 WormBase:K04G2.3 InParanoid:Q21222
OMA:QVAPTIV NextBio:876139 Uniprot:Q21222
Length = 724
Score = 454 (164.9 bits), Expect = 4.3e-44, Sum P(2) = 4.3e-44
Identities = 92/227 (40%), Positives = 140/227 (61%)
Query: 149 KIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCY 208
+I P+ + E P+V++ND+GG +E ++++ V P HPE F + GIDPP G+L Y
Sbjct: 440 RIRPTGIRQFILEVPNVSWNDIGGNEELKLEIQQAVIWPQKHPEAFERFGIDPPAGILLY 499
Query: 209 GPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFD 268
GPPG KTL+ARA+A+ F+ V G EL K+VG+ + +R+LF AR IVFFD
Sbjct: 500 GPPGCSKTLIARALASEAKMNFLAVKGPELFSKWVGDSEKAIRDLFSRARQVAPTIVFFD 559
Query: 269 EVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPG 328
E+DA+G +R + G ++ R + +++ +LDG + + +L ATNRPD LD ALLRPG
Sbjct: 560 EIDAVGSSRGSEKSSGVSD--RVLAQLLTELDGLEKSSRVILLAATNRPDQLDSALLRPG 617
Query: 329 RLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
RLDR + GLP +R I ++ T+ M + +R + +L ++G
Sbjct: 618 RLDRAIYVGLPCEVTRRAILEMRTKKMKFDDTVR--TIDKLVEKTSG 662
Score = 37 (18.1 bits), Expect = 4.3e-44, Sum P(2) = 4.3e-44
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 16 RPLDEDDIALLKTYGLGPYSTSIKKAE 42
+P+ E +IA + L ++ ++ KAE
Sbjct: 34 KPVVESEIACAQNGTLRGFNVAVDKAE 60
>UNIPROTKB|Q9Y4W6 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9606 "Homo
sapiens" [GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0021675 "nerve
development" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0051082 "unfolded protein binding" evidence=TAS]
[GO:0005739 "mitochondrion" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005739 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0008219 DrugBank:DB00171 GO:GO:0007528 GO:GO:0051082
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 eggNOG:COG0465
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 GO:GO:0021675 GO:GO:0060013 EMBL:Y18314 EMBL:BC065016
IPI:IPI00001091 RefSeq:NP_006787.2 UniGene:Hs.726355 PDB:2LNA
PDBsum:2LNA ProteinModelPortal:Q9Y4W6 SMR:Q9Y4W6 IntAct:Q9Y4W6
MINT:MINT-1161944 STRING:Q9Y4W6 MEROPS:M41.007 PhosphoSite:Q9Y4W6
DMDM:126302516 PaxDb:Q9Y4W6 PeptideAtlas:Q9Y4W6 PRIDE:Q9Y4W6
Ensembl:ENST00000269143 GeneID:10939 KEGG:hsa:10939 UCSC:uc002kqz.2
GeneCards:GC18M012328 H-InvDB:HIX0027367 HGNC:HGNC:315
HPA:HPA004479 HPA:HPA004480 MIM:604581 MIM:610246 MIM:614487
neXtProt:NX_Q9Y4W6 Orphanet:101109 PharmGKB:PA24612
InParanoid:Q9Y4W6 PhylomeDB:Q9Y4W6 GenomeRNAi:10939 NextBio:41551
ArrayExpress:Q9Y4W6 Bgee:Q9Y4W6 CleanEx:HS_AFG3L2
Genevestigator:Q9Y4W6 GermOnline:ENSG00000141385 Uniprot:Q9Y4W6
Length = 797
Score = 471 (170.9 bits), Expect = 4.3e-44, P = 4.3e-44
Identities = 90/214 (42%), Positives = 135/214 (63%)
Query: 155 TMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTG 214
T ++++ DV + DV GC+E ++ E V + +P+++ LG PKG + GPPGTG
Sbjct: 295 TAKVLKDEIDVKFKDVAGCEEAKLEIMEFVNF-LKNPKQYQDLGAKIPKGAILTGPPGTG 353
Query: 215 KTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIG 274
KTLLA+A A + FI V GSE ++ +VG G VR+LF +AR CI+F DE+DA+G
Sbjct: 354 KTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVG 413
Query: 275 GARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKV 334
R GG +E + T+ +++ ++DGF+ N+ +L TNRPD LDPALLRPGR DR++
Sbjct: 414 RKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQI 473
Query: 335 EFGLPDLESRTQIFKIHTRTMNCERDIRFELLSR 368
G PD++ R IFK+H R + + + + L+R
Sbjct: 474 FIGPPDIKGRASIFKVHLRPLKLDSTLEKDKLAR 507
>UNIPROTKB|E2QYF3 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060013 "righting reflex" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0042407 "cristae
formation" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
EMBL:AAEX03005521 RefSeq:XP_547682.2 ProteinModelPortal:E2QYF3
Ensembl:ENSCAFT00000029872 GeneID:490560 KEGG:cfa:490560
Uniprot:E2QYF3
Length = 806
Score = 471 (170.9 bits), Expect = 4.5e-44, P = 4.5e-44
Identities = 90/214 (42%), Positives = 135/214 (63%)
Query: 155 TMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTG 214
T ++++ DV + DV GC+E ++ E V + +P+++ LG PKG + GPPGTG
Sbjct: 296 TAKVLKDEIDVKFKDVAGCEEAKLEIMEFVNF-LKNPKQYQDLGAKIPKGAILTGPPGTG 354
Query: 215 KTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIG 274
KTLLA+A A + FI V GSE ++ +VG G VR+LF +AR CI+F DE+DA+G
Sbjct: 355 KTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVG 414
Query: 275 GARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKV 334
R GG +E + T+ +++ ++DGF+ N+ +L TNRPD LDPAL+RPGR DR++
Sbjct: 415 RKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQI 474
Query: 335 EFGLPDLESRTQIFKIHTRTMNCERDIRFELLSR 368
G PD++ R IFK+H R + + + E L+R
Sbjct: 475 FIGPPDIKGRASIFKVHLRPLKLDSALEKEKLAR 508
>UNIPROTKB|Q55700 [details] [associations]
symbol:ftsH2 "ATP-dependent zinc metalloprotease FtsH 2"
species:1111708 "Synechocystis sp. PCC 6803 substr. Kazusa"
[GO:0010206 "photosystem II repair" evidence=IMP] [GO:0042651
"thylakoid membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009523 "photosystem II" evidence=IDA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:BA000022 GenomeReviews:BA000022_GR GO:GO:0042651 GO:GO:0010206
HOGENOM:HOG000217276 KO:K03798 PIR:S76378 RefSeq:NP_442160.1
RefSeq:YP_005652219.1 ProteinModelPortal:Q55700 SMR:Q55700
IntAct:Q55700 STRING:Q55700 MEROPS:M41.017 GeneID:12253438
GeneID:952628 KEGG:syn:slr0228 KEGG:syy:SYNGTS_2266 PATRIC:23841938
OMA:NTASTRM Uniprot:Q55700
Length = 627
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 90/218 (41%), Positives = 135/218 (61%)
Query: 159 VEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLL 218
++ K V ++DV G E E+++EVV + PE+F +G PKGVL GPPGTGKTLL
Sbjct: 163 MDAKTGVMFDDVAGIDEAKEELQEVVTF-LKQPERFTAVGAKIPKGVLLVGPPGTGKTLL 221
Query: 219 ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARF 278
A+A+A F + GSE V+ +VG GA VR+LF+ A+ C++F DE+DA+G R
Sbjct: 222 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLIFIDEIDAVGRQR- 280
Query: 279 DDGVGGDN-EVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFG 337
G+GG N E ++T+ +++ ++DGF+ I ++ ATNRPD LD AL+RPGR DR+V
Sbjct: 281 GAGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDSALMRPGRFDRQVMVD 340
Query: 338 LPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
PD R +I ++H R ++ + ++R P +G
Sbjct: 341 APDYSGRKEILEVHARNKKLAPEVSIDSIARRTPGFSG 378
>TIGR_CMR|NSE_0423 [details] [associations]
symbol:NSE_0423 "ATP-dependent metalloprotease FtsH"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 EMBL:CP000237 GenomeReviews:CP000237_GR
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001 RefSeq:YP_506309.1
ProteinModelPortal:Q2GDY7 SMR:Q2GDY7 STRING:Q2GDY7 GeneID:3931660
KEGG:nse:NSE_0423 PATRIC:22680905 OMA:ENIESLH
ProtClustDB:CLSK749654 BioCyc:NSEN222891:GHFU-445-MONOMER
Uniprot:Q2GDY7
Length = 636
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 86/211 (40%), Positives = 136/211 (64%)
Query: 165 VTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVAN 224
VT++DV G E E++ E+VE + P+KF KLG PKG L GPPGTGKTLLA+A+A
Sbjct: 154 VTFHDVAGIDEAKEELAEIVEF-LREPKKFQKLGGKIPKGCLLIGPPGTGKTLLAKAIAG 212
Query: 225 RTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGG 284
F + GS+ V+ +VG GA VR++F+ + C++F DE+DA+G R GG
Sbjct: 213 EAKVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCLIFIDEIDAVGRHRGVGFGGG 272
Query: 285 DNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESR 344
++E ++T+ +++ ++DGF+A + ++ ATNRPD LDPALLRPGR DR++ +PD+ R
Sbjct: 273 NDEREQTLNQLLVEMDGFEANEGVIIIAATNRPDVLDPALLRPGRFDRQITISIPDIAGR 332
Query: 345 TQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
+I ++H + + ++ +++R P +G
Sbjct: 333 QKILEVHLKKIPTAPNVEVSIIARGTPGFSG 363
>MGI|MGI:1928277 [details] [associations]
symbol:Afg3l1 "AFG3(ATPase family gene 3)-like 1 (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=ISA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IGI] [GO:0008053 "mitochondrial fusion" evidence=IGI]
[GO:0008152 "metabolic process" evidence=ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0034982 "mitochondrial protein processing"
evidence=IGI] [GO:0042407 "cristae formation" evidence=IGI]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1928277
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GO:GO:0031966
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 EMBL:AK012394 EMBL:AK159647 EMBL:AK167964
EMBL:AK168244 EMBL:BC056978 EMBL:AF329695 IPI:IPI00468514
IPI:IPI00652659 RefSeq:NP_473411.2 UniGene:Mm.287475
ProteinModelPortal:Q920A7 SMR:Q920A7 IntAct:Q920A7 STRING:Q920A7
MEROPS:M41.016 PhosphoSite:Q920A7 PaxDb:Q920A7 PRIDE:Q920A7
Ensembl:ENSMUST00000001520 Ensembl:ENSMUST00000098320 GeneID:114896
KEGG:mmu:114896 UCSC:uc009nwd.2 CTD:114896 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 InParanoid:Q920A7 KO:K08956 OMA:WDEKDFR
OrthoDB:EOG4SBDXC NextBio:368917 Bgee:Q920A7 CleanEx:MM_AFG3L1
Genevestigator:Q920A7 GermOnline:ENSMUSG00000031967 GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
Uniprot:Q920A7
Length = 789
Score = 470 (170.5 bits), Expect = 5.2e-44, P = 5.2e-44
Identities = 96/225 (42%), Positives = 139/225 (61%)
Query: 155 TMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTG 214
T ++ DV + DV GC+E ++ E V + +P+++ LG PKG + GPPGTG
Sbjct: 287 TAKILKNNIDVRFADVAGCEEAKLEIMEFVNF-LKNPKQYQDLGAKIPKGAMLTGPPGTG 345
Query: 215 KTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIG 274
KTLLA+A A + FI V GSE ++ +VG G VR++F MAR CI+F DE+DAIG
Sbjct: 346 KTLLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDMFAMARKHAPCILFIDEIDAIG 405
Query: 275 GARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKV 334
R +GG +E + T+ +++ ++DGF++ N+ VL TNRPD LDPAL RPGR DR++
Sbjct: 406 RKRGRGHLGGQSEQENTLNQMLVEMDGFNSSTNVVVLAGTNRPDILDPALTRPGRFDRQI 465
Query: 335 EFGLPDLESRTQIFKIHTRTMNCERDIRFELLSR----LCPNSTG 375
G PD++ R+ IFK+H R + + + + LSR L P TG
Sbjct: 466 YIGPPDIKGRSSIFKVHLRPLKLDGSLSKDALSRKLAALTPGFTG 510
>UNIPROTKB|F1LN92 [details] [associations]
symbol:Afg3l2 "Protein Afg3l2" species:10116 "Rattus
norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016265 "death" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0021675 "nerve development" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 RGD:1305259
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
IPI:IPI00192903 RefSeq:NP_001128336.1 UniGene:Rn.8386
ProteinModelPortal:F1LN92 PRIDE:F1LN92 Ensembl:ENSRNOT00000024632
GeneID:307350 KEGG:rno:307350 NextBio:657254 ArrayExpress:F1LN92
Uniprot:F1LN92
Length = 802
Score = 470 (170.5 bits), Expect = 5.7e-44, P = 5.7e-44
Identities = 90/214 (42%), Positives = 135/214 (63%)
Query: 155 TMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTG 214
T ++++ DV + DV GC+E ++ E V + +P+++ LG PKG + GPPGTG
Sbjct: 294 TAKVLKDEIDVKFKDVAGCEEAKLEIMEFVNF-LKNPKQYQDLGAKIPKGAILTGPPGTG 352
Query: 215 KTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIG 274
KTLLA+A A + FI V GSE ++ +VG G VR+LF +AR CI+F DE+DA+G
Sbjct: 353 KTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVG 412
Query: 275 GARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKV 334
R GG +E + T+ +++ ++DGF+ N+ +L TNRPD LDPALLRPGR DR++
Sbjct: 413 RKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQI 472
Query: 335 EFGLPDLESRTQIFKIHTRTMNCERDIRFELLSR 368
G PD++ R IFK+H R + + + + L+R
Sbjct: 473 FIGPPDIKGRASIFKVHLRPLKLDSALEKDKLAR 506
>UNIPROTKB|E2RC37 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 CTD:166378 OMA:NDIRPSA
EMBL:AAEX03011797 RefSeq:XP_540960.2 ProteinModelPortal:E2RC37
Ensembl:ENSCAFT00000006393 GeneID:483840 KEGG:cfa:483840
Uniprot:E2RC37
Length = 893
Score = 471 (170.9 bits), Expect = 6.9e-44, P = 6.9e-44
Identities = 88/217 (40%), Positives = 136/217 (62%)
Query: 150 IDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYG 209
I PS + P+V+++D+GG + K+++ VE P+ HPE F+++GI PPKGVL YG
Sbjct: 609 IRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPESFIRMGIQPPKGVLLYG 668
Query: 210 PPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDE 269
PPG KT++A+A+AN + F+ + G EL+ KYVGE R VRE+F+ AR+ I+FFDE
Sbjct: 669 PPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAVSPSIIFFDE 728
Query: 270 VDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGR 329
+DA+ R G N R + +++ ++DG + ++ +L ATNRPD +D AL+RPGR
Sbjct: 729 LDALAIERGSSS-GAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRPDRIDKALMRPGR 787
Query: 330 LDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELL 366
+DR + LPD +R +I + +M D+ + L
Sbjct: 788 IDRIIYVPLPDAATRREILNLQFHSMPISNDVNLDEL 824
Score = 399 (145.5 bits), Expect = 4.1e-36, P = 4.1e-36
Identities = 83/190 (43%), Positives = 120/190 (63%)
Query: 165 VTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVAN 224
VTY+ +GG Q++ +RE++ELP+ PE F GI PP+GVL YGPPGTGKT++ARAVAN
Sbjct: 350 VTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVAN 409
Query: 225 RTDACFIRVI-GSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVG 283
A ++ VI G E++ K+ GE +R++F A + I+F DE+DA+ R G
Sbjct: 410 EVGA-YVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKR----EG 464
Query: 284 GDNEVQ-RTMLEIVNQLDGFDARGN---IKVLMATNRPDTLDPALLRPGRLDRKVEFGLP 339
NEV+ R + ++ +DG + G+ + VL ATNRP LD AL RPGR D+++E G+P
Sbjct: 465 AQNEVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVP 524
Query: 340 DLESRTQIFK 349
+ R I +
Sbjct: 525 NAADRLDILQ 534
>GENEDB_PFALCIPARUM|PF07_0047 [details] [associations]
symbol:PF07_0047 "cell division cycle ATPase,
putative" species:5833 "Plasmodium falciparum" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0016887 GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 PANTHER:PTHR23077:SF18
SMART:SM01073 EMBL:AL844506 EMBL:M96757 RefSeq:XP_001349023.1
ProteinModelPortal:P46468 IntAct:P46468 MINT:MINT-1593477
PRIDE:P46468 EnsemblProtists:PF07_0047:mRNA GeneID:2655095
KEGG:pfa:PF07_0047 EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 466 (169.1 bits), Expect = 6.9e-44, Sum P(2) = 6.9e-44
Identities = 88/218 (40%), Positives = 142/218 (65%)
Query: 160 EEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLA 219
E D+TY D+GG K+Q+ K+RE++ELP+ +PE F+ +GI PKGVL +G PGTGKT +A
Sbjct: 519 ENNDDITYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIA 578
Query: 220 RAVANRTDA-CFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARF 278
+A+AN ++A C+I + G E++ K++GE + +R++F+ A K CI+F DE+D+I R
Sbjct: 579 KAIANESNAYCYI-INGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANKRS 637
Query: 279 DDGVGGDNEVQ-RTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFG 337
+NE++ R + +++ +DG N+ VL ATNRP+++DPAL R GR DR++E
Sbjct: 638 KS----NNELEKRVVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIP 693
Query: 338 LPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
+PD + R +I T+ M + D+ +++ C G
Sbjct: 694 VPDEQGRYEILLTKTKKMKLDPDVNLRKIAKECHGYVG 731
Score = 414 (150.8 bits), Expect = 2.5e-38, Sum P(2) = 2.5e-38
Identities = 84/199 (42%), Positives = 120/199 (60%)
Query: 163 PDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAV 222
P VT+ND+GG E E+++E + P+ + + K + KG+L YGPPG GKTLLA+A+
Sbjct: 929 PTVTWNDIGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAI 988
Query: 223 ANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGV 282
AN A FI V G EL+ + GE VR+LF AR+ CI+FFDE+D++ R +
Sbjct: 989 ANECKANFISVKGPELLTMWFGESEANVRDLFDKARAASPCIIFFDEIDSLAKER-NSNT 1047
Query: 283 GGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLE 342
D R + +I+ ++DG + + I ++ ATNRPD LD AL RPGRLD+ + LPDL+
Sbjct: 1048 NNDAS-DRVINQILTEIDGINEKKTIFIIAATNRPDILDKALTRPGRLDKLIYISLPDLK 1106
Query: 343 SRTQIFKIHTRTMNCERDI 361
SR IFK + D+
Sbjct: 1107 SRYSIFKAILKNTPLNEDV 1125
Score = 37 (18.1 bits), Expect = 6.9e-44, Sum P(2) = 6.9e-44
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 93 KIINPNSEDSKYVINVKQIAKF 114
K+ N S+D +N K I KF
Sbjct: 211 KVENKQSDDKIKNLNNKYIKKF 232
>UNIPROTKB|P46468 [details] [associations]
symbol:PF07_0047 "Putative cell division cycle ATPase"
species:36329 "Plasmodium falciparum 3D7" [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0016887
GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 PANTHER:PTHR23077:SF18 SMART:SM01073 EMBL:AL844506
EMBL:M96757 RefSeq:XP_001349023.1 ProteinModelPortal:P46468
IntAct:P46468 MINT:MINT-1593477 PRIDE:P46468
EnsemblProtists:PF07_0047:mRNA GeneID:2655095 KEGG:pfa:PF07_0047
EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 466 (169.1 bits), Expect = 6.9e-44, Sum P(2) = 6.9e-44
Identities = 88/218 (40%), Positives = 142/218 (65%)
Query: 160 EEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLA 219
E D+TY D+GG K+Q+ K+RE++ELP+ +PE F+ +GI PKGVL +G PGTGKT +A
Sbjct: 519 ENNDDITYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIA 578
Query: 220 RAVANRTDA-CFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARF 278
+A+AN ++A C+I + G E++ K++GE + +R++F+ A K CI+F DE+D+I R
Sbjct: 579 KAIANESNAYCYI-INGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANKRS 637
Query: 279 DDGVGGDNEVQ-RTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFG 337
+NE++ R + +++ +DG N+ VL ATNRP+++DPAL R GR DR++E
Sbjct: 638 KS----NNELEKRVVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIP 693
Query: 338 LPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
+PD + R +I T+ M + D+ +++ C G
Sbjct: 694 VPDEQGRYEILLTKTKKMKLDPDVNLRKIAKECHGYVG 731
Score = 414 (150.8 bits), Expect = 2.5e-38, Sum P(2) = 2.5e-38
Identities = 84/199 (42%), Positives = 120/199 (60%)
Query: 163 PDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAV 222
P VT+ND+GG E E+++E + P+ + + K + KG+L YGPPG GKTLLA+A+
Sbjct: 929 PTVTWNDIGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAI 988
Query: 223 ANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGV 282
AN A FI V G EL+ + GE VR+LF AR+ CI+FFDE+D++ R +
Sbjct: 989 ANECKANFISVKGPELLTMWFGESEANVRDLFDKARAASPCIIFFDEIDSLAKER-NSNT 1047
Query: 283 GGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLE 342
D R + +I+ ++DG + + I ++ ATNRPD LD AL RPGRLD+ + LPDL+
Sbjct: 1048 NNDAS-DRVINQILTEIDGINEKKTIFIIAATNRPDILDKALTRPGRLDKLIYISLPDLK 1106
Query: 343 SRTQIFKIHTRTMNCERDI 361
SR IFK + D+
Sbjct: 1107 SRYSIFKAILKNTPLNEDV 1125
Score = 37 (18.1 bits), Expect = 6.9e-44, Sum P(2) = 6.9e-44
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 93 KIINPNSEDSKYVINVKQIAKF 114
K+ N S+D +N K I KF
Sbjct: 211 KVENKQSDDKIKNLNNKYIKKF 232
>UNIPROTKB|Q2GFA1 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST
MEROPS:M41.001 ProtClustDB:CLSK749654 RefSeq:YP_507882.1
ProteinModelPortal:Q2GFA1 SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708
KEGG:ech:ECH_1098 PATRIC:20577534
BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 461 (167.3 bits), Expect = 1.0e-43, P = 1.0e-43
Identities = 91/221 (41%), Positives = 139/221 (62%)
Query: 156 MMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGK 215
+MT E + VT+NDV G E E++ E+V+ + H ++F KLG PKG L G PGTGK
Sbjct: 145 LMT-ENRNKVTFNDVAGIDEAKEELIEIVDF-LKHRQRFQKLGGKIPKGCLLIGSPGTGK 202
Query: 216 TLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGG 275
TLLARA+A + F + GS+ V+ +VG GA VR++F+ + CI+F DE+DA+G
Sbjct: 203 TLLARAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCIIFIDEIDAVGR 262
Query: 276 ARFDDGVGGDN-EVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKV 334
R G+GG N E ++T+ +++ ++DGF++ + ++ ATNRPD LD ALLRPGR DR+V
Sbjct: 263 HR-GIGLGGGNDEREQTLNQLLVEMDGFESNEGVIIIAATNRPDVLDSALLRPGRFDRQV 321
Query: 335 EFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
+PD+ R +I +H + + D+ ++R P +G
Sbjct: 322 TISIPDINGREKIINVHIKKVPTAPDVNIRTIARGTPGFSG 362
>TIGR_CMR|ECH_1098 [details] [associations]
symbol:ECH_1098 "ATP-dependent metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 GO:GO:0000910
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_507882.1 ProteinModelPortal:Q2GFA1
SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708 KEGG:ech:ECH_1098
PATRIC:20577534 BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 461 (167.3 bits), Expect = 1.0e-43, P = 1.0e-43
Identities = 91/221 (41%), Positives = 139/221 (62%)
Query: 156 MMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGK 215
+MT E + VT+NDV G E E++ E+V+ + H ++F KLG PKG L G PGTGK
Sbjct: 145 LMT-ENRNKVTFNDVAGIDEAKEELIEIVDF-LKHRQRFQKLGGKIPKGCLLIGSPGTGK 202
Query: 216 TLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGG 275
TLLARA+A + F + GS+ V+ +VG GA VR++F+ + CI+F DE+DA+G
Sbjct: 203 TLLARAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCIIFIDEIDAVGR 262
Query: 276 ARFDDGVGGDN-EVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKV 334
R G+GG N E ++T+ +++ ++DGF++ + ++ ATNRPD LD ALLRPGR DR+V
Sbjct: 263 HR-GIGLGGGNDEREQTLNQLLVEMDGFESNEGVIIIAATNRPDVLDSALLRPGRFDRQV 321
Query: 335 EFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
+PD+ R +I +H + + D+ ++R P +G
Sbjct: 322 TISIPDINGREKIINVHIKKVPTAPDVNIRTIARGTPGFSG 362
>DICTYBASE|DDB_G0284249 [details] [associations]
symbol:DDB_G0284249 "peptidase M41, FtsH
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006461 "protein complex assembly" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0044351 "macropinocytosis" evidence=RCA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284249 GO:GO:0016021 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0006461 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 KO:K08956 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:AAFI02000064 RefSeq:XP_638674.1 ProteinModelPortal:Q54PX1
SMR:Q54PX1 MEROPS:M41.A17 EnsemblProtists:DDB0229917 GeneID:8624503
KEGG:ddi:DDB_G0284249 InParanoid:Q54PX1 OMA:VSIYGMN
ProtClustDB:CLSZ2846729 Uniprot:Q54PX1
Length = 764
Score = 451 (163.8 bits), Expect = 1.4e-43, Sum P(2) = 1.4e-43
Identities = 92/213 (43%), Positives = 132/213 (61%)
Query: 165 VTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVAN 224
V ++DV G E ++ E V + +P+KF +G P+G + GPPGTGKTL+A+A A
Sbjct: 299 VKFSDVAGLGEAKVEIEEFVNF-LKNPKKFHDIGAKIPRGAILVGPPGTGKTLIAKATAG 357
Query: 225 RTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGG 284
+ F GS+ V+ +VG G VR+LF+ AR CIVF DE+DA+G AR G G
Sbjct: 358 EANVPFYSTSGSDFVEMFVGVGPSRVRDLFEQARKNAPCIVFIDEIDAVGRARGKGGFSG 417
Query: 285 DN-EVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLES 343
N E + T+ +++ ++DGF N+ VL ATNRPD LD ALLRPGR DR++ PDL+S
Sbjct: 418 SNDERENTLNQLLVEMDGFKPLKNVVVLAATNRPDILDKALLRPGRFDRQITIDNPDLKS 477
Query: 344 RTQIFKIHTRTMNCERDIRF-ELLSRLCPNSTG 375
R +IF++H + ++ I + E LS+L P +G
Sbjct: 478 REEIFRVHLAALLLDKSINYAERLSKLTPGFSG 510
Score = 38 (18.4 bits), Expect = 1.4e-43, Sum P(2) = 1.4e-43
Identities = 14/48 (29%), Positives = 21/48 (43%)
Query: 19 DEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGI--KESDTG 64
+E+ ++L + Y TS + K IKD K KE +TG
Sbjct: 55 NENQTSILNRFFNNEYITSPSFSIKSIKDSIFKSEGWGNFEKKEKETG 102
>UNIPROTKB|E1BZ74 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0016265 "death" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0034982 "mitochondrial protein processing"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0042407 "cristae formation" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0060013 "righting
reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0008270 GO:GO:0006508
GO:GO:0040014 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 GO:GO:0016265
GO:GO:0060013 EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00603273 Ensembl:ENSGALT00000022474 ArrayExpress:E1BZ74
Uniprot:E1BZ74
Length = 805
Score = 465 (168.7 bits), Expect = 2.0e-43, P = 2.0e-43
Identities = 92/225 (40%), Positives = 138/225 (61%)
Query: 155 TMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTG 214
T ++++ DV + DV GC+E ++ E V + +P+++ LG PKG + GPPGTG
Sbjct: 295 TAKVLKDEIDVKFKDVAGCEEAKLEIMEFVNF-LKNPKQYEDLGAKIPKGAILTGPPGTG 353
Query: 215 KTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIG 274
KTLLA+A A + FI V GSE ++ +VG G VR+LF +AR CI+F DE+DA+G
Sbjct: 354 KTLLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVG 413
Query: 275 GARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKV 334
R GG +E + T+ +++ ++DGF+ N+ +L TNRPD LDPAL+RPGR DR++
Sbjct: 414 RKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQI 473
Query: 335 EFGLPDLESRTQIFKIHTRTMNCE----RDIRFELLSRLCPNSTG 375
G PD++ R IFK+H R + + +D L+ L P +G
Sbjct: 474 YIGPPDIKGRASIFKVHLRPLKLDTVLDKDNLARKLASLTPGFSG 518
>UNIPROTKB|J3KRP2 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0017025 "TBP-class protein binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031595 "nuclear proteasome complex"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR003959 Pfam:PF00004
GO:GO:0005524 EMBL:AC015651 ChiTaRS:PSMC5 HGNC:HGNC:9552
Ensembl:ENST00000584320 Uniprot:J3KRP2
Length = 241
Score = 455 (165.2 bits), Expect = 4.5e-43, P = 4.5e-43
Identities = 94/196 (47%), Positives = 126/196 (64%)
Query: 73 LVSDKQMMQEEQPLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMR 132
L+ ++ + +EQ V + + + K ++ V KFVV + + D+ R
Sbjct: 50 LLREELQLLQEQGSYVGEVVRAM----DKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCR 105
Query: 133 VGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPE 192
V + + Y + LP K+DP V++M VE+ PD TY +GG +QI++++EV+ELP+ HPE
Sbjct: 106 VALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPE 165
Query: 193 KFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRE 252
F LGI PKGVL YGPPGTGKTLLARAVA+ TD FIRV GSELVQK++GEGARMVRE
Sbjct: 166 LFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRE 225
Query: 253 LFQMARSKKACIVFFD 268
LF MAR I+F D
Sbjct: 226 LFVMAREHAPSIIFMD 241
>TIGR_CMR|DET_0391 [details] [associations]
symbol:DET_0391 "ATP-dependent metalloprotease FtsH"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:LEIIAMR MEROPS:M41.021
RefSeq:YP_181136.1 ProteinModelPortal:Q3Z9G3 SMR:Q3Z9G3
STRING:Q3Z9G3 GeneID:3230280 KEGG:det:DET0391 PATRIC:21607849
ProtClustDB:CLSK837509 BioCyc:DETH243164:GJNF-391-MONOMER
Uniprot:Q3Z9G3
Length = 608
Score = 455 (165.2 bits), Expect = 4.5e-43, P = 4.5e-43
Identities = 93/208 (44%), Positives = 129/208 (62%)
Query: 161 EKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLAR 220
+KP +T+ +V G E +++ EVVE + EKF LG PKG+L GPPGTGKTLLA+
Sbjct: 152 DKPTITFANVAGVDEAKQEVGEVVEF-LKSREKFQALGARIPKGILLIGPPGTGKTLLAK 210
Query: 221 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDD 280
A+A F + GSE V+ +VG GA VR+LF A+ CI+F DE+DA+G R
Sbjct: 211 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFDQAKKNAPCIIFIDEIDAVGRQRGAG 270
Query: 281 GVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPD 340
GG +E ++T+ +I+ ++DGFD ++ V+ ATNRPD LDPALLRPGR DR+V PD
Sbjct: 271 LGGGHDEREQTLNQILVEMDGFDTDTSVIVIAATNRPDILDPALLRPGRFDRRVVLDKPD 330
Query: 341 LESRTQIFKIHTRTMNCERDIRFELLSR 368
+ R I KIH + + E L++
Sbjct: 331 ITGREAILKIHAKGKPLADTVNLENLAK 358
>UNIPROTKB|P37476 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0008233 "peptidase activity" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IDA] [GO:0030428 "cell septum"
evidence=IDA] [GO:0043934 "sporulation" evidence=IMP]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0006950 GO:GO:0051301 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0007049
GO:GO:0030163 EMBL:AL009126 GenomeReviews:AL009126_GR GO:GO:0043934
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0008233
GO:GO:0030428 EMBL:D26185 HOGENOM:HOG000217276 KO:K03798 PIR:E69627
RefSeq:NP_387950.1 ProteinModelPortal:P37476 SMR:P37476
IntAct:P37476 MEROPS:M41.009 EnsemblBacteria:EBBACT00000001428
GeneID:938094 KEGG:bsu:BSU00690 PATRIC:18971613 GenoList:BSU00690
OMA:ENMSYST ProtClustDB:CLSK886567 BioCyc:BSUB:BSU00690-MONOMER
Uniprot:P37476
Length = 637
Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
Identities = 91/223 (40%), Positives = 133/223 (59%)
Query: 153 SVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPG 212
S + EEK V + DV G E+ +++ EVVE + P KF +LG PKGVL GPPG
Sbjct: 146 SKAKLYTEEKKRVKFKDVAGADEEKQELVEVVEF-LKDPRKFAELGARIPKGVLLVGPPG 204
Query: 213 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDA 272
TGKTLLA+A A F + GS+ V+ +VG GA VR+LF+ A+ C++F DE+DA
Sbjct: 205 TGKTLLAKACAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCLIFIDEIDA 264
Query: 273 IGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDR 332
+G R GG +E ++T+ +++ ++DGF A I ++ ATNR D LDPALLRPGR DR
Sbjct: 265 VGRQRGAGLGGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRADILDPALLRPGRFDR 324
Query: 333 KVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
++ PD+ R + K+H R + + + ++ P +G
Sbjct: 325 QITVDRPDVIGREAVLKVHARNKPLDETVNLKSIAMRTPGFSG 367
>UNIPROTKB|E1BFQ0 [details] [associations]
symbol:E1BFQ0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042407 "cristae formation" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 OMA:WDEKDFR GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
EMBL:DAAA02046282 IPI:IPI00707325 Ensembl:ENSBTAT00000056979
Uniprot:E1BFQ0
Length = 802
Score = 460 (167.0 bits), Expect = 7.1e-43, P = 7.1e-43
Identities = 92/221 (41%), Positives = 137/221 (61%)
Query: 159 VEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLL 218
+++ V + DV GC+E ++ E V + +P+++ LG PKG L GPPGTGKTLL
Sbjct: 294 IKDDIGVRFADVAGCEEAKLEIMEFVNF-LKNPKQYQDLGAKIPKGALLTGPPGTGKTLL 352
Query: 219 ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARF 278
A+A A FI V GSE ++ +VG G VR++F +AR CI+F DE+DAIG R
Sbjct: 353 AKATAGEAGVPFITVNGSEFLEMFVGVGPARVRDMFALARKNAPCILFVDEIDAIGRKRG 412
Query: 279 DDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGL 338
GG +E + T+ +++ ++DGF++ N+ VL TNRPD LDPAL+RPGR DR++ G
Sbjct: 413 RGHFGGQSEQENTLNQLLVEMDGFNSTTNVVVLAGTNRPDVLDPALMRPGRFDRQIYIGP 472
Query: 339 PDLESRTQIFKIHTRTMNCERDIRFELLSR----LCPNSTG 375
PD++ R+ IF++H R + + + + L+R L P TG
Sbjct: 473 PDIKGRSSIFRVHLRPLKLDESLSKDALARKLAALTPGFTG 513
>MGI|MGI:1927170 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:1927170 GO:GO:0007275
GO:GO:0005739 GO:GO:0005524 GO:GO:0030154 GO:GO:0007283
eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 HSSP:Q9WZ49
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073
CTD:166378 HOVERGEN:HBG108504 OMA:NDIRPSA OrthoDB:EOG43FGWF
EMBL:AF049099 EMBL:AK011111 EMBL:AK144998 EMBL:AL669927
EMBL:AL627074 EMBL:AL645968 IPI:IPI00649667 RefSeq:NP_001156983.1
RefSeq:NP_067318.2 UniGene:Mm.172679 ProteinModelPortal:Q3UMC0
SMR:Q3UMC0 PhosphoSite:Q3UMC0 PaxDb:Q3UMC0 PRIDE:Q3UMC0
Ensembl:ENSMUST00000029277 Ensembl:ENSMUST00000108112 GeneID:57815
KEGG:mmu:57815 UCSC:uc008pau.2 InParanoid:Q3UMC0 NextBio:314006
Bgee:Q3UMC0 Genevestigator:Q3UMC0 Uniprot:Q3UMC0
Length = 893
Score = 461 (167.3 bits), Expect = 8.4e-43, P = 8.4e-43
Identities = 88/217 (40%), Positives = 135/217 (62%)
Query: 150 IDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYG 209
I PS + P+V+++D+GG + K+++ VE P+ HP+ F ++GI PPKGVL YG
Sbjct: 609 IRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPKSFNRMGIQPPKGVLLYG 668
Query: 210 PPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDE 269
PPG KT++A+A+AN + F+ + G EL+ KYVGE R VRE+F+ AR+ I+FFDE
Sbjct: 669 PPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAVAPSIIFFDE 728
Query: 270 VDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGR 329
+DA+ R G N R + +++ ++DG + N+ VL ATNRPD +D AL+RPGR
Sbjct: 729 LDALAVERGSSS-GAGNVADRVLAQLLTEMDGIEQLKNVTVLAATNRPDRIDKALMRPGR 787
Query: 330 LDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELL 366
+DR + LPD +R +I + +M ++ + L
Sbjct: 788 IDRIIYVPLPDAATRREILNLQFHSMPISNEVDLDEL 824
Score = 391 (142.7 bits), Expect = 3.0e-35, P = 3.0e-35
Identities = 89/217 (41%), Positives = 132/217 (60%)
Query: 165 VTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVAN 224
VTY+ +GG Q++ +RE++ELP+ PE F GI P+G+L YGPPGTGKT++ARAVAN
Sbjct: 350 VTYDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVAN 409
Query: 225 RTDACFIRVI-GSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVG 283
A ++ VI G E++ K+ GE +R++F A + I+F DE+DA+ R G
Sbjct: 410 EVGA-YVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKR----EG 464
Query: 284 GDNEVQ-RTMLEIVNQLDGFDARGN---IKVLMATNRPDTLDPALLRPGRLDRKVEFGLP 339
+EV+ R + ++ +DG + G+ + VL ATNRP LD AL RPGR D+++E G+P
Sbjct: 465 AQSEVEKRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGIP 524
Query: 340 DLESRTQIF-KIHTRTMNCERDIRFELLSRLCPNSTG 375
+ + R I K+ R + + ELL RL N+ G
Sbjct: 525 NAQDRLDILQKLLRRVPHLLT--KAELL-RLANNAHG 558
>CGD|CAL0000075 [details] [associations]
symbol:AFG3 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005745 "m-AAA complex"
evidence=IEA] [GO:0097002 "mitochondrial inner boundary membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 CGD:CAL0000075
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.002 EMBL:AACQ01000014
EMBL:AACQ01000013 RefSeq:XP_721627.1 RefSeq:XP_721746.1
ProteinModelPortal:Q5AJC2 SMR:Q5AJC2 STRING:Q5AJC2 GeneID:3636589
GeneID:3636771 KEGG:cal:CaO19.1669 KEGG:cal:CaO19.9238
Uniprot:Q5AJC2
Length = 795
Score = 459 (166.6 bits), Expect = 8.7e-43, P = 8.7e-43
Identities = 92/204 (45%), Positives = 128/204 (62%)
Query: 149 KIDPS-VTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLC 207
KI S + E + + + DV GC E E++ E V+ + P K+ KLG P+G +
Sbjct: 267 KIGKSKAKLFNQENEVKIKFKDVAGCDESKEEIMEFVKF-LQDPHKYEKLGAKIPRGAIL 325
Query: 208 YGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFF 267
GPPGTGKTLLA+A A F+ V GSE V+ +VG GA VR+LF+ AR I+F
Sbjct: 326 SGPPGTGKTLLAKATAGEAGVPFLSVSGSEFVEMFVGVGASRVRDLFKTAREMAPAIIFV 385
Query: 268 DEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRP 327
DE+DAIG R + +GG++E + T+ +++ ++DGFD ++ VL TNRPD LD ALLRP
Sbjct: 386 DEIDAIGKERGNGRMGGNDERENTLNQLLVEMDGFDTTDHVVVLAGTNRPDILDKALLRP 445
Query: 328 GRLDRKVEFGLPDLESRTQIFKIH 351
GR DR + +PD+E R QIFK+H
Sbjct: 446 GRFDRHISIDVPDVEGRKQIFKVH 469
>UNIPROTKB|Q5AJC2 [details] [associations]
symbol:AFG3 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 CGD:CAL0000075
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.002 EMBL:AACQ01000014
EMBL:AACQ01000013 RefSeq:XP_721627.1 RefSeq:XP_721746.1
ProteinModelPortal:Q5AJC2 SMR:Q5AJC2 STRING:Q5AJC2 GeneID:3636589
GeneID:3636771 KEGG:cal:CaO19.1669 KEGG:cal:CaO19.9238
Uniprot:Q5AJC2
Length = 795
Score = 459 (166.6 bits), Expect = 8.7e-43, P = 8.7e-43
Identities = 92/204 (45%), Positives = 128/204 (62%)
Query: 149 KIDPS-VTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLC 207
KI S + E + + + DV GC E E++ E V+ + P K+ KLG P+G +
Sbjct: 267 KIGKSKAKLFNQENEVKIKFKDVAGCDESKEEIMEFVKF-LQDPHKYEKLGAKIPRGAIL 325
Query: 208 YGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFF 267
GPPGTGKTLLA+A A F+ V GSE V+ +VG GA VR+LF+ AR I+F
Sbjct: 326 SGPPGTGKTLLAKATAGEAGVPFLSVSGSEFVEMFVGVGASRVRDLFKTAREMAPAIIFV 385
Query: 268 DEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRP 327
DE+DAIG R + +GG++E + T+ +++ ++DGFD ++ VL TNRPD LD ALLRP
Sbjct: 386 DEIDAIGKERGNGRMGGNDERENTLNQLLVEMDGFDTTDHVVVLAGTNRPDILDKALLRP 445
Query: 328 GRLDRKVEFGLPDLESRTQIFKIH 351
GR DR + +PD+E R QIFK+H
Sbjct: 446 GRFDRHISIDVPDVEGRKQIFKVH 469
>UNIPROTKB|P0C5C0 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:1773 "Mycobacterium tuberculosis" [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP;IDA] [GO:0006979 "response
to oxidative stress" evidence=IDA] [GO:0010468 "regulation of gene
expression" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0040007
"growth" evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0040007 GO:GO:0006979 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0046872
EMBL:BX842583 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0010468
HOGENOM:HOG000217276 KO:K03798 PIR:C70956 RefSeq:NP_218127.1
RefSeq:NP_338259.1 RefSeq:YP_006517099.1 ProteinModelPortal:P0C5C0
SMR:P0C5C0 PRIDE:P0C5C0 EnsemblBacteria:EBMYCT00000001212
EnsemblBacteria:EBMYCT00000069111 GeneID:13317218 GeneID:885732
GeneID:926520 KEGG:mtc:MT3714 KEGG:mtu:Rv3610c KEGG:mtv:RVBD_3610c
PATRIC:18129921 TubercuList:Rv3610c OMA:RSEMIAR
ProtClustDB:CLSK792593 Uniprot:P0C5C0
Length = 760
Score = 458 (166.3 bits), Expect = 9.0e-43, P = 9.0e-43
Identities = 89/216 (41%), Positives = 133/216 (61%)
Query: 160 EEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLA 219
++ P T+ DV G E +E++ E+ + + +P ++ LG PKGVL YGPPGTGKTLLA
Sbjct: 155 KDMPKTTFADVAGVDEAVEELYEIKDF-LQNPSRYQALGAKIPKGVLLYGPPGTGKTLLA 213
Query: 220 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFD 279
RAVA F + GS+ V+ +VG GA VR+LF+ A+ CI+F DE+DA+G R
Sbjct: 214 RAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEIDAVGRQRGA 273
Query: 280 DGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLP 339
GG +E ++T+ +++ ++DGF R + ++ ATNRPD LDPALLRPGR DR++ P
Sbjct: 274 GLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDILDPALLRPGRFDRQIPVSNP 333
Query: 340 DLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
DL R + ++H++ D + L++ TG
Sbjct: 334 DLAGRRAVLRVHSKGKPMAADADLDGLAKRTVGMTG 369
>CGD|CAL0002187 [details] [associations]
symbol:orf19.6432 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
CGD:CAL0002187 GO:GO:0005524 EMBL:AACQ01000073 EMBL:AACQ01000072
eggNOG:COG0464 KO:K14575 GO:GO:0017111 InterPro:IPR009010
SUPFAM:SSF50692 SMART:SM01073 RefSeq:XP_716187.1 RefSeq:XP_716270.1
ProteinModelPortal:Q5A331 GeneID:3642106 GeneID:3642160
KEGG:cal:CaO19.13790 KEGG:cal:CaO19.6432 Uniprot:Q5A331
Length = 766
Score = 451 (163.8 bits), Expect = 5.5e-42, P = 5.5e-42
Identities = 96/256 (37%), Positives = 144/256 (56%)
Query: 127 IEEGMRVGVDRNKYQIQIP----LPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMRE 182
I G+ VG+ + ++ + P+I PS E P V ++D+GG +E K+ E
Sbjct: 454 INRGLTVGIPQTAIKVTVDDVYHALPEIRPSAMREIFLEMPKVHWSDIGGQEELKRKLIE 513
Query: 183 VVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKY 242
VV+LP+ + F LG+ PKGVL YGPPG KTL A+A+A + F+ V G E+ KY
Sbjct: 514 VVQLPLEASDSFKNLGVSSPKGVLLYGPPGCSKTLTAKALATESGLNFLAVKGPEIFNKY 573
Query: 243 VGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGF 302
VGE R +RE+F+ AR+ I+FFDE+DAI G R DG + ++N++DG
Sbjct: 574 VGESERAIREIFRKARAASPSIIFFDEIDAIAGDR--DGDSSTTAASNVLTSLLNEIDGV 631
Query: 303 DARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCE---R 359
+ + ++ ATN+P +DPALLRPGRLDR + PD ++R QI + +R N +
Sbjct: 632 EELKGVVIVGATNKPTEIDPALLRPGRLDRHIYVAPPDYDARLQILQKCSRKFNLQSGDE 691
Query: 360 DIRFELLSRLCPNSTG 375
+ + L+ L +G
Sbjct: 692 SVDLQKLAELTDGCSG 707
Score = 432 (157.1 bits), Expect = 6.6e-40, P = 6.6e-40
Identities = 86/213 (40%), Positives = 133/213 (62%)
Query: 165 VTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVAN 224
+TY+ VGG +QIE ++ +ELP+ +P F GI PP+G+L +GPPGTGKT+L R VAN
Sbjct: 226 ITYDQVGGLSKQIELLKSTIELPLNNPTLFSDFGISPPRGILLHGPPGTGKTMLLRCVAN 285
Query: 225 R-TDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVG 283
T+A + + G +V KY+GE +R++F A+ + I+F DE+D+I +R D
Sbjct: 286 SITEAHVLTINGPSIVSKYLGETENAIRDIFNEAKKFQPSIIFMDEIDSIAPSRTSDD-S 344
Query: 284 GDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLES 343
G+ E R + +++ +DG G I V+ ATNRP+++D AL RPGR D++VE G+PD+E+
Sbjct: 345 GETE-SRVVAQLLTVMDGMGDNGRIVVIGATNRPNSIDSALRRPGRFDQEVEIGIPDVEA 403
Query: 344 RTQIFKIHTRTMNCER-DIRFELLSRLCPNSTG 375
R +I MN E+ I E ++ + + G
Sbjct: 404 REEILTKQFAKMNSEKCQITKEEIASIASKTHG 436
>SGD|S000004389 [details] [associations]
symbol:AFG2 "ATPase of the CDC48/PAS1/SEC18 (AAA) family,
forms a hexameric complex" species:4932 "Saccharomyces cerevisiae"
[GO:0030687 "preribosome, large subunit precursor"
evidence=IDA;IMP] [GO:0042493 "response to drug" evidence=IMP]
[GO:0005622 "intracellular" evidence=IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0042273 "ribosomal
large subunit biogenesis" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000004389 GO:GO:0005524 GO:GO:0042493
EMBL:BK006945 GO:GO:0016887 eggNOG:COG0464 HOGENOM:HOG000223225
KO:K14575 OrthoDB:EOG49CTH0 GO:GO:0042273 EMBL:L14615 EMBL:U19729
EMBL:AY693116 PIR:S39110 RefSeq:NP_013501.1
ProteinModelPortal:P32794 SMR:P32794 DIP:DIP-4470N IntAct:P32794
MINT:MINT-566202 STRING:P32794 PaxDb:P32794 PeptideAtlas:P32794
EnsemblFungi:YLR397C GeneID:851113 KEGG:sce:YLR397C CYGD:YLR397c
GeneTree:ENSGT00700000104502 OMA:MLLRCVA NextBio:967827
Genevestigator:P32794 GermOnline:YLR397C GO:GO:0030687
Uniprot:P32794
Length = 780
Score = 451 (163.8 bits), Expect = 6.0e-42, P = 6.0e-42
Identities = 96/238 (40%), Positives = 140/238 (58%)
Query: 127 IEEGMRVGVDRNKYQIQIPLPP----KID--PSVTMMTVEEKPDVTYNDVGGCKEQIEKM 180
I+ G+ + +K+ +++ L +D PS E P V ++D+GG +E KM
Sbjct: 469 IQRGLGTDANIDKFSLKVTLKDVESAMVDIRPSAMREIFLEMPKVYWSDIGGQEELKTKM 528
Query: 181 REVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQ 240
+E+++LP+ E F +LGI PKGVL YGPPG KTL A+A+A + F+ V G E+
Sbjct: 529 KEMIQLPLEASETFARLGISAPKGVLLYGPPGCSKTLTAKALATESGINFLAVKGPEIFN 588
Query: 241 KYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLD 300
KYVGE R +RE+F+ ARS I+FFDE+DA+ R N V ++L N++D
Sbjct: 589 KYVGESERAIREIFRKARSAAPSIIFFDEIDALSPDRDGSSTSAANHVLTSLL---NEID 645
Query: 301 GFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCE 358
G + + ++ ATNRPD +D ALLRPGRLDR + G PD+ +R +I K T+ N E
Sbjct: 646 GVEELKGVVIVAATNRPDEIDAALLRPGRLDRHIYVGPPDVNARLEILKKCTKKFNTE 703
Score = 417 (151.9 bits), Expect = 3.1e-38, P = 3.1e-38
Identities = 79/198 (39%), Positives = 126/198 (63%)
Query: 165 VTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVAN 224
++Y VGG ++IE ++ +E+P+ P F G+ PP+G+L +GPPGTGKT+L R VAN
Sbjct: 242 LSYAAVGGLDKEIESLKSAIEIPLHQPTLFSSFGVSPPRGILLHGPPGTGKTMLLRVVAN 301
Query: 225 RTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGG 284
++A + + G +V KY+GE +R++F AR + I+F DE+D+I R +D G
Sbjct: 302 TSNAHVLTINGPSIVSKYLGETEAALRDIFNEARKYQPSIIFIDEIDSIAPNRANDDSG- 360
Query: 285 DNEVQ-RTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLES 343
EV+ R + ++ +DG A G + V+ ATNRP+++DPAL RPGR D++VE G+PD+++
Sbjct: 361 --EVESRVVATLLTLMDGMGAAGKVVVIAATNRPNSVDPALRRPGRFDQEVEIGIPDVDA 418
Query: 344 RTQIFKIHTRTMNCERDI 361
R I M+ +R +
Sbjct: 419 RFDILTKQFSRMSSDRHV 436
>DICTYBASE|DDB_G0293388 [details] [associations]
symbol:DDB_G0293388 "ATP-dependent metalloprotease"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0293388 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 EMBL:AAFI02000204
RefSeq:XP_629167.2 ProteinModelPortal:Q54BW7 STRING:Q54BW7
MEROPS:M41.A16 EnsemblProtists:DDB0304811 GeneID:8629188
KEGG:ddi:DDB_G0293388 InParanoid:Q54BW7 OMA:ICLAGRA Uniprot:Q54BW7
Length = 767
Score = 450 (163.5 bits), Expect = 7.2e-42, P = 7.2e-42
Identities = 88/210 (41%), Positives = 134/210 (63%)
Query: 166 TYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANR 225
+++DV G +E E++ E+V+ +LHP K+ +G PKGVL G PGTGKTLLARA+A
Sbjct: 298 SFDDVKGIQEVKEELEEIVDY-LLHPTKYNSIGAKLPKGVLLSGEPGTGKTLLARAIAGE 356
Query: 226 TDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGD 285
F+ GS +KYVG G+R VRELF AR K+ CI+F DE+DA+G +R
Sbjct: 357 AGVSFLYTTGSSFDEKYVGVGSRRVRELFNAAREKQPCIIFIDEIDAVGKSR---NTAHH 413
Query: 286 NEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRT 345
NE T+L+++ ++DGF+ I ++ ATN P++LDPALLRPGR DR + +PD++ R+
Sbjct: 414 NE---TLLQLLTEMDGFEGNSQIMIIGATNAPNSLDPALLRPGRFDRHISVPIPDMKGRS 470
Query: 346 QIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
+I + + + +++ + ++R P TG
Sbjct: 471 EIIDHYLKKVKHTVEVKADTIARATPGFTG 500
>TAIR|locus:2066128 [details] [associations]
symbol:ftsh3 "FTSH protease 3" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005739 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 EMBL:AC005315 GO:GO:0030163 eggNOG:COG0465
HOGENOM:HOG000217277 KO:K08956 OMA:WDEKDFR TIGRFAMs:TIGR01241
HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0004176 EMBL:BT002743 EMBL:AY063914
EMBL:AK226271 IPI:IPI00525466 PIR:T02738 RefSeq:NP_850129.1
UniGene:At.24335 ProteinModelPortal:Q84WU8 SMR:Q84WU8
MEROPS:M41.022 PaxDb:Q84WU8 PRIDE:Q84WU8 EnsemblPlants:AT2G29080.1
GeneID:817456 KEGG:ath:AT2G29080 GeneFarm:2506 TAIR:At2g29080
InParanoid:Q84WU8 PhylomeDB:Q84WU8 ProtClustDB:CLSN2692039
Genevestigator:Q84WU8 Uniprot:Q84WU8
Length = 809
Score = 450 (163.5 bits), Expect = 9.1e-42, P = 9.1e-42
Identities = 91/225 (40%), Positives = 135/225 (60%)
Query: 153 SVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPG 212
++T K + + DV GC E +++ E V + +P+K+ LG PKG L GPPG
Sbjct: 307 TITRADKHSKNKIYFKDVAGCDEAKQEIMEFVHF-LKNPKKYEDLGAKIPKGALLVGPPG 365
Query: 213 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDA 272
TGKTLLA+A A + F+ + GS+ ++ +VG G VR LFQ AR I+F DE+DA
Sbjct: 366 TGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRHLFQEARQAAPSIIFIDEIDA 425
Query: 273 IGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDR 332
IG AR G+GG++E + T+ +++ ++DGF + VL TNRPD LD ALLRPGR DR
Sbjct: 426 IGRARGRGGLGGNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDR 485
Query: 333 KVEFGLPDLESRTQIFKIHTRTMNCERDIRF--ELLSRLCPNSTG 375
++ PD++ R QIFKI+ + + + + + + L+ L P G
Sbjct: 486 QITIDKPDIKGRDQIFKIYLKKIKLDHEPSYYSQRLAALTPGFAG 530
>POMBASE|SPBC16E9.10c [details] [associations]
symbol:SPBC16E9.10c "AAA family ATPase Rix7
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000055
"ribosomal large subunit export from nucleus" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0016887
"ATPase activity" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16E9.10c GO:GO:0005524 GO:GO:0005730
EMBL:CU329671 GO:GO:0016887 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0000055 KO:K14571 OMA:NDMTLKE
OrthoDB:EOG40GH00 PIR:T39584 RefSeq:NP_595792.1
ProteinModelPortal:O14325 STRING:O14325 EnsemblFungi:SPBC16E9.10c.1
GeneID:2539968 KEGG:spo:SPBC16E9.10c NextBio:20801111
Uniprot:O14325
Length = 779
Score = 449 (163.1 bits), Expect = 9.9e-42, P = 9.9e-42
Identities = 104/281 (37%), Positives = 156/281 (55%)
Query: 98 NSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMM 157
+S DS + + I +++ D +SP ++E + + + I K+ PS
Sbjct: 428 DSNDSLPLDHSSIIQRYLNAHPDPLSPEELEP---LAICPQDF---IEALAKVQPSSKRE 481
Query: 158 TVEEKPDVTYNDVGGCKE-QIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKT 216
P V++N++G K ++E +V+ P+ PE + +GI P GVL +GPPG GKT
Sbjct: 482 GFATVPGVSWNNIGALKSIRVELQMAIVQ-PIKRPELYQSVGISAPTGVLLWGPPGCGKT 540
Query: 217 LLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGA 276
LLA+AVAN + A FI + G EL+ KYVGE R VR++F AR+ C++FFDE+DA+
Sbjct: 541 LLAKAVANESKANFISIRGPELLNKYVGESERAVRQVFLRARASSPCVIFFDELDAMVPR 600
Query: 277 RFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEF 336
R D + V T+L +LDG R + V+ ATNRPD +DPA+LRPGRLD+ +
Sbjct: 601 RDDSLSEASSRVVNTLL---TELDGLSDRSGVYVIAATNRPDIIDPAMLRPGRLDKTLLV 657
Query: 337 GLPDLESRTQIFKIHTRTMNCERDIRFELLSR--LCPNSTG 375
LPD R +I K T+ ++ ++L R C N +G
Sbjct: 658 DLPDAHERVEILKTLTKQTPLHEEVNLDVLGRDERCSNFSG 698
Score = 364 (133.2 bits), Expect = 1.7e-32, P = 1.7e-32
Identities = 100/341 (29%), Positives = 165/341 (48%)
Query: 37 SIKKAEKEIKD-MAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKII 95
S+++ +K I + + +KV D E + LA+ LV Q + L + T +I
Sbjct: 52 SLRRIKKPILEKVVEKVLDTLKA-EVEEKLASSQDLVLVDSDMEEQSDSNLMEVKDTNVI 110
Query: 96 NPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVT 155
N + N+K+I G +K S +E + R + + +
Sbjct: 111 NKSITSLWSSPNLKEID----GEDEKKSVG--QESITGSAKRKDRRSKTNGSKRQKAEAN 164
Query: 156 MMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGK 215
E D++ +D+GG + I ++ E+V +P+ HPE + GI PP+GVL +GPPG GK
Sbjct: 165 R---EPPSDISLSDIGGLDDCINELLELVAMPIKHPEVYQYTGIHPPRGVLLHGPPGCGK 221
Query: 216 TLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGG 275
T+LA A+AN FI + +V GE + VRE+F+ A+S C++F DE+DA+
Sbjct: 222 TMLANALANELGVPFISISAPSIVSGMSGESEKKVREVFEEAKSLAPCLMFIDEIDAVTP 281
Query: 276 ARFDDGVGGDNEVQRTMLEIVNQLDGFDARGN-IKVLMATNRPDTLDPALLRPGRLDRKV 334
R + + L +++L G + V+ ATNRPD+LD AL R GR DR++
Sbjct: 282 KRESAQREMERRIVAQFLTCMDELSFEKTDGKPVLVIGATNRPDSLDSALRRAGRFDREI 341
Query: 335 EFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
+P ++R +I + + + D F L++ P G
Sbjct: 342 CLTVPSQDAREKILRTMAKGLKLSGDFDFRQLAKQTPGYVG 382
>UNIPROTKB|J9P5D7 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:AAEX03005293 EMBL:AAEX03005294 EMBL:AAEX03005295
EMBL:AAEX03005296 Ensembl:ENSCAFT00000049264 Uniprot:J9P5D7
Length = 855
Score = 435 (158.2 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 101/274 (36%), Positives = 152/274 (55%)
Query: 97 PNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTM 156
P SE V++V+ ++++ L P E+ + ++ N + + + + PS
Sbjct: 514 PASETP--VLSVQDELQWLLELLRSQDPLSEEQLQGLCIEWNDFTVALS---SVQPSAKR 568
Query: 157 MTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKT 216
P VT+ D+G ++ E++ + P+ PE+F LG+ P GVL GPPG GKT
Sbjct: 569 EGFVTVPSVTWADIGALEDIREELTMAILAPVRSPEQFRALGLMTPAGVLLAGPPGCGKT 628
Query: 217 LLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGA 276
LLA+AVAN + FI V G EL+ YVGE R VR++FQ ARS C++FFDEVDA+
Sbjct: 629 LLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRARSSAPCVIFFDEVDALCPR 688
Query: 277 RFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEF 336
R D G R + +++ ++DG +AR + ++ ATNRPD +DPA+LRPGRLD+ +
Sbjct: 689 RSDRETGAS---VRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFV 745
Query: 337 GLPDLESRTQIFKIHTRTMN---CERDIRFELLS 367
GLP R I K T+ + D+ E L+
Sbjct: 746 GLPPPADRLAILKTITKNGTRPPLDADVNLEALA 779
Score = 367 (134.2 bits), Expect = 3.0e-34, Sum P(2) = 3.0e-34
Identities = 80/211 (37%), Positives = 119/211 (56%)
Query: 165 VTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVAN 224
V + DVGG ++++ +++ + M HPE + LG PP+GVL +GPPG GKTLLA A+A
Sbjct: 256 VKFEDVGGNDATLKEVCKML-IHMRHPEVYHHLGAVPPRGVLLHGPPGCGKTLLAHAIAG 314
Query: 225 RTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGG 284
D ++V +E+V GE + +RELF+ A S C++F DE+DAI R
Sbjct: 315 ELDLPILKVAATEVVSGVSGESEQKLRELFEQAVSNAPCVLFIDEIDAITPKREVASKDM 374
Query: 285 DNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESR 344
+ + +L ++ L+ A + V+ ATNRPD+LDPAL R GR DR++ G+PD SR
Sbjct: 375 ERRIVAQLLTCMDDLNTTAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASR 434
Query: 345 TQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
+I + R + F L+ L P G
Sbjct: 435 ERILQTLCRKLRLPETFPFRHLAHLTPGFVG 465
Score = 40 (19.1 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 17/54 (31%), Positives = 24/54 (44%)
Query: 37 SIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQP-LQVA 89
SI +EKE+KD+ + D K + G + SD E+ P QVA
Sbjct: 64 SIITSEKEVKDLTA-LEDEHLAKRARQGEEDNEYTESYSDSDSNMEDYPDPQVA 116
>UNIPROTKB|H0YJC0 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 Pfam:PF00004 SMART:SM00382 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0017111
EMBL:AL133453 HGNC:HGNC:9553 Ensembl:ENST00000556813 Uniprot:H0YJC0
Length = 262
Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 96/250 (38%), Positives = 147/250 (58%)
Query: 42 EKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCT-KIINP--- 97
+K ++D KK L KE D L + KQ + E L+ + +I+
Sbjct: 6 DKALQDYRKK---LLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLK 62
Query: 98 NSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMM 157
+ K+++ ++VVG ++ + ++ G RV +D I LP ++DP V M
Sbjct: 63 QLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNM 122
Query: 158 TVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTL 217
+ E+ +V+Y+++GG EQI ++REV+ELP+ +PE F ++GI PPKG L YGPPGTGKTL
Sbjct: 123 SHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTL 182
Query: 218 LARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGG-- 275
LARAVA++ D F++V+ S +V KY+GE AR++RE+F AR + CI+F DE+DAI
Sbjct: 183 LARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIDYEA 242
Query: 276 -ARFDDGVGG 284
+ DG G
Sbjct: 243 IVKLSDGFNG 252
>ASPGD|ASPL0000029469 [details] [associations]
symbol:AN5588 species:162425 "Emericella nidulans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006457 "protein
folding" evidence=IEA] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0031942 "i-AAA
complex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01241 OMA:SEFDEVY EnsemblFungi:CADANIAT00003489
Uniprot:C8VG17
Length = 784
Score = 446 (162.1 bits), Expect = 2.2e-41, P = 2.2e-41
Identities = 95/208 (45%), Positives = 128/208 (61%)
Query: 161 EKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLAR 220
E V ++DV GC E ++++E+VE +L+PE+F LG PKGVL GPPGTGKTLLAR
Sbjct: 308 EHQTVRFSDVHGCDEAKDELQELVEF-LLNPERFSSLGGKLPKGVLLVGPPGTGKTLLAR 366
Query: 221 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDD 280
AVA F + GSE + YVG GA+ VRELF ARSK I+F DE+DAIG R +
Sbjct: 367 AVAGEAGVPFFYMSGSEFDEVYVGVGAKRVRELFNQARSKSPAIIFIDELDAIGAKRNER 426
Query: 281 GVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPD 340
V++T+ +++ +LDGF + +L ATN P+ LD AL RPGR DRKV LPD
Sbjct: 427 DAA---YVKQTLNQLLTELDGFSQSTGVIILAATNYPELLDKALTRPGRFDRKVVVDLPD 483
Query: 341 LESRTQIFKIHTRTMNCERDIRFELLSR 368
+ R I K H + + D+ +++R
Sbjct: 484 VRGRMDILKHHMKNVQISTDVDVAVIAR 511
>TAIR|locus:2103555 [details] [associations]
symbol:CIP111 "Cam interacting protein 111" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IDA;TAS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GO:GO:0016887 GO:GO:0005516 HSSP:Q01853
eggNOG:COG0464 EMBL:AL390921 GO:GO:0009535 HOGENOM:HOG000223224
EMBL:AF217546 EMBL:AF217547 IPI:IPI00534707 PIR:T50927 PIR:T51257
RefSeq:NP_191228.1 UniGene:At.9830 ProteinModelPortal:Q9LET7
SMR:Q9LET7 IntAct:Q9LET7 STRING:Q9LET7 PRIDE:Q9LET7
EnsemblPlants:AT3G56690.1 GeneID:824836 KEGG:ath:AT3G56690
GeneFarm:2042 TAIR:At3g56690 InParanoid:Q9LET7 OMA:SEAKLNF
PhylomeDB:Q9LET7 ProtClustDB:CLSN2684205 Genevestigator:Q9LET7
Uniprot:Q9LET7
Length = 1022
Score = 449 (163.1 bits), Expect = 2.4e-41, P = 2.4e-41
Identities = 95/227 (41%), Positives = 129/227 (56%)
Query: 149 KIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCY 208
KI PS + E P V + DVGG E ++ E VE P H + F ++G PP G+L +
Sbjct: 705 KIRPSAMREVILEVPKVNWEDVGGQNEVKNQLMEAVEWPQKHQDAFKRIGTRPPSGILMF 764
Query: 209 GPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFD 268
GPPG KTL+ARAVA+ F+ V G EL K+VGE + VR LF AR+ I+FFD
Sbjct: 765 GPPGCSKTLMARAVASEAKLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFD 824
Query: 269 EVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPG 328
E+D++ R + G + R M +++ +LDG R + V+ ATNRPD +D ALLRPG
Sbjct: 825 EIDSLASIRGKEN-DGVSVSDRVMSQLLVELDGLHQRVGVTVIAATNRPDKIDSALLRPG 883
Query: 329 RLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
R DR + G P+ R I KIH R + C DI + L+ + TG
Sbjct: 884 RFDRLLYVGPPNETDREAILKIHLRKIPCSSDICLKELASITKGYTG 930
Score = 356 (130.4 bits), Expect = 2.2e-31, P = 2.2e-31
Identities = 72/186 (38%), Positives = 111/186 (59%)
Query: 170 VGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDAC 229
+GG ++ +R++++ + LG+ P KGVL +GPPGTGKT LAR A +
Sbjct: 387 LGGLSKEYAILRDIIDSSSIK-NSLSSLGLRPTKGVLIHGPPGTGKTSLARTFARHSGVN 445
Query: 230 FIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQ 289
F V G E++ +Y+GE + + E+F+ A + +VF D++DAI AR + GG+ Q
Sbjct: 446 FFSVNGPEIISQYLGESEKALDEVFRSASNATPAVVFIDDLDAIAPARKE---GGEELSQ 502
Query: 290 RTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFK 349
R + ++N +DG + V+ ATNRPD+++PAL RPGRLDR++E G+P R+ I
Sbjct: 503 RMVATLLNLMDGISRTDGVVVIAATNRPDSIEPALRRPGRLDREIEIGVPSSTQRSDILH 562
Query: 350 IHTRTM 355
I R M
Sbjct: 563 IILRGM 568
>DICTYBASE|DDB_G0282181 [details] [associations]
symbol:nvl "valosin-containing protein" species:44689
"Dictyostelium discoideum" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;ISS] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
dictyBase:DDB_G0282181 GO:GO:0005524 GO:GO:0005730
GenomeReviews:CM000152_GR EMBL:AAFI02000045 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0000055 KO:K14571
RefSeq:XP_640327.1 ProteinModelPortal:Q54SY2
EnsemblProtists:DDB0237516 GeneID:8623428 KEGG:ddi:DDB_G0282181
InParanoid:Q54SY2 OMA:KQIQYYK ProtClustDB:CLSZ2846768
Uniprot:Q54SY2
Length = 867
Score = 447 (162.4 bits), Expect = 2.5e-41, P = 2.5e-41
Identities = 87/213 (40%), Positives = 129/213 (60%)
Query: 149 KIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCY 208
K+ P+ P+VT++DVG E++ + P+ +P+K+ +GID P GVL Y
Sbjct: 547 KVVPAAKREGFATIPNVTWDDVGALSGVREELTNSILRPIRYPKKYKNMGIDSPAGVLMY 606
Query: 209 GPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFD 268
GPPG GKTLLA+A+A+ A FI V G EL+ KYVGE R VR++FQ A + C++FFD
Sbjct: 607 GPPGCGKTLLAKAIASECQANFISVKGPELLNKYVGESERAVRQVFQRAAASSPCVIFFD 666
Query: 269 EVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPG 328
E DA+ R GG+ +R + +++ ++DG + R + ++ ATNRPD +D A+ RPG
Sbjct: 667 EFDALAPKRGGGDGGGNQATERVVNQLLTEMDGLEKRSEVFIIAATNRPDIIDAAMCRPG 726
Query: 329 RLDRKVEFGLPDLESRTQIFKIHTRTMNCERDI 361
RLD+ V LP E R +I K T + +D+
Sbjct: 727 RLDKMVYVPLPSPEERCEILKTLTHKIPIHQDV 759
Score = 247 (92.0 bits), Expect = 1.4e-27, Sum P(2) = 1.4e-27
Identities = 51/156 (32%), Positives = 87/156 (55%)
Query: 163 PDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAV 222
P + ++++GG + + +RE +E P+ HPE + LG++PP+G+L +GP G GKTLLA+A+
Sbjct: 211 PTINFSNLGGVESCLRDIREHIEYPICHPEIYSHLGVEPPRGILLHGPSGCGKTLLAKAI 270
Query: 223 ANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGV 282
A + +E+ GE VR LF A ++ CI+F DE+DAI R +
Sbjct: 271 AGELKVPLFAISATEITSGVSGESEARVRTLFSNAIAQAPCIIFIDEIDAIAPKR--ESA 328
Query: 283 GGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPD 318
D E +R + +++ +D + + +TN P+
Sbjct: 329 SKDME-RRIVSQLLTCMDSLNYLSSNN---STNEPN 360
Score = 136 (52.9 bits), Expect = 1.4e-27, Sum P(2) = 1.4e-27
Identities = 27/71 (38%), Positives = 44/71 (61%)
Query: 305 RGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFE 364
+G++ V+ ATNRP++LD AL GR D+++ G+PD +R +I K+ T M E + +E
Sbjct: 400 KGHVIVIGATNRPESLDTALRIGGRFDKEICLGIPDQTARCKILKVITSKMRLENNFDYE 459
Query: 365 LLSRLCPNSTG 375
++ L P G
Sbjct: 460 EIATLTPGYVG 470
>UNIPROTKB|E1BT72 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730
GO:GO:0016235 GO:GO:0017111 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:AADN02012163 IPI:IPI00584236
Ensembl:ENSGALT00000015173 ArrayExpress:E1BT72 Uniprot:E1BT72
Length = 858
Score = 446 (162.1 bits), Expect = 3.1e-41, P = 3.1e-41
Identities = 102/284 (35%), Positives = 160/284 (56%)
Query: 97 PNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTM 156
P E++K + + +++ + + L K P ++ ++ ++ N + + + + PS
Sbjct: 514 PVEENTKQLPSKEELQRLLYLL-KKQDPLPEDQLQKLCIEMNDFIVALS---SVQPSAKR 569
Query: 157 MTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKT 216
PDVT+ D+G ++ E++ + P+ +PE+F LG+ P GVL GPPG GKT
Sbjct: 570 EGFVTIPDVTWADIGALEDVREELTMAILAPVRNPEQFKALGLTTPAGVLLAGPPGCGKT 629
Query: 217 LLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGA 276
LLA+AVAN + FI V G EL+ YVGE R VR++FQ AR+ C++FFDEVDA+
Sbjct: 630 LLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRARNSAPCVIFFDEVDALCPR 689
Query: 277 RFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEF 336
R D G R + +++ ++DG + R + ++ ATNRPD +DPA+LRPGRLD+ +
Sbjct: 690 RSDRESGAS---VRVVNQLLTEMDGLENRQQVFIMAATNRPDIIDPAILRPGRLDKTLYV 746
Query: 337 GLPDLESRTQIFKIHTRTMN---CERDIRFELL--SRLCPNSTG 375
GLP E R I K T+ + D+ E + S+ C TG
Sbjct: 747 GLPPPEDRLAILKTITKDGTRPPLDTDVNLEEIAYSQQCDCYTG 790
Score = 365 (133.5 bits), Expect = 1.7e-32, P = 1.7e-32
Identities = 77/213 (36%), Positives = 121/213 (56%)
Query: 163 PDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAV 222
P V + DVGG E ++++ +++ + + HPE ++ LG+ PP+G L +GPPG GKTLLA+A+
Sbjct: 255 PSVKFEDVGGNDETLKEICKML-IHVRHPEVYLHLGVVPPRGFLLHGPPGCGKTLLAQAI 313
Query: 223 ANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGV 282
A + ++V +E+V GE + +RELF A C++F DE+DAI R
Sbjct: 314 AGELELPMLKVAATEMVSGVSGESEQKLRELFDQAVLNAPCVLFIDEIDAITPKREVASK 373
Query: 283 GGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLE 342
+ + +L ++ L+ A + V+ ATNRPD+LDPAL R GR DR++ G+PD
Sbjct: 374 DMERRIVAQLLTCLDDLNNVAATAQVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEA 433
Query: 343 SRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
+R +I + R + F L+ L P G
Sbjct: 434 AREKILQTLCRKLKLPGSFDFLHLAHLTPGYVG 466
>UNIPROTKB|E2QY79 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 GeneTree:ENSGT00570000079239 EMBL:AAEX03005293
EMBL:AAEX03005294 EMBL:AAEX03005295 EMBL:AAEX03005296
Ensembl:ENSCAFT00000025949 NextBio:20855189 Uniprot:E2QY79
Length = 851
Score = 430 (156.4 bits), Expect = 4.2e-41, Sum P(2) = 4.2e-41
Identities = 103/294 (35%), Positives = 155/294 (52%)
Query: 80 MQEEQPLQVARCTKIINPNSED---SKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVD 136
+QE+QP T ED ++ ++++ L P E+ + ++
Sbjct: 487 LQEQQPTDPEMGTLPSKGGQEDRVGTEPASETPDELQWLLELLRSQDPLSEEQLQGLCIE 546
Query: 137 RNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVK 196
N + + + + PS P VT+ D+G ++ E++ + P+ PE+F
Sbjct: 547 WNDFTVALS---SVQPSAKREGFVTVPSVTWADIGALEDIREELTMAILAPVRSPEQFRA 603
Query: 197 LGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQM 256
LG+ P GVL GPPG GKTLLA+AVAN + FI V G EL+ YVGE R VR++FQ
Sbjct: 604 LGLMTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQR 663
Query: 257 ARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNR 316
ARS C++FFDEVDA+ R D G R + +++ ++DG +AR + ++ ATNR
Sbjct: 664 ARSSAPCVIFFDEVDALCPRRSDRETGAS---VRVVNQLLTEMDGLEARQQVFIMAATNR 720
Query: 317 PDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMN---CERDIRFELLS 367
PD +DPA+LRPGRLD+ + GLP R I K T+ + D+ E L+
Sbjct: 721 PDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTRPPLDADVNLEALA 774
Score = 367 (134.2 bits), Expect = 2.9e-34, Sum P(2) = 2.9e-34
Identities = 80/211 (37%), Positives = 119/211 (56%)
Query: 165 VTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVAN 224
V + DVGG ++++ +++ + M HPE + LG PP+GVL +GPPG GKTLLA A+A
Sbjct: 256 VKFEDVGGNDATLKEVCKML-IHMRHPEVYHHLGAVPPRGVLLHGPPGCGKTLLAHAIAG 314
Query: 225 RTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGG 284
D ++V +E+V GE + +RELF+ A S C++F DE+DAI R
Sbjct: 315 ELDLPILKVAATEVVSGVSGESEQKLRELFEQAVSNAPCVLFIDEIDAITPKREVASKDM 374
Query: 285 DNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESR 344
+ + +L ++ L+ A + V+ ATNRPD+LDPAL R GR DR++ G+PD SR
Sbjct: 375 ERRIVAQLLTCMDDLNTTAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASR 434
Query: 345 TQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
+I + R + F L+ L P G
Sbjct: 435 ERILQTLCRKLRLPETFPFRHLAHLTPGFVG 465
Score = 40 (19.1 bits), Expect = 4.2e-41, Sum P(2) = 4.2e-41
Identities = 17/54 (31%), Positives = 24/54 (44%)
Query: 37 SIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQP-LQVA 89
SI +EKE+KD+ + D K + G + SD E+ P QVA
Sbjct: 64 SIITSEKEVKDLTA-LEDEHLAKRARQGEEDNEYTESYSDSDSNMEDYPDPQVA 116
>TAIR|locus:2044209 [details] [associations]
symbol:CDC48B "cell division cycle 48B" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0051301 GO:GO:0005856 GO:GO:0015031 GO:GO:0007049
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 EMBL:AC006836
GO:GO:0009524 EMBL:AY062443 EMBL:BT008371 IPI:IPI00527776
PIR:A84451 RefSeq:NP_178463.1 UniGene:At.27340
ProteinModelPortal:Q9ZPR1 SMR:Q9ZPR1 PaxDb:Q9ZPR1 PRIDE:Q9ZPR1
EnsemblPlants:AT2G03670.1 GeneID:814895 KEGG:ath:AT2G03670
GeneFarm:1901 TAIR:At2g03670 InParanoid:Q9ZPR1 OMA:RECNAHL
PhylomeDB:Q9ZPR1 ProtClustDB:CLSN2683845 Genevestigator:Q9ZPR1
GermOnline:AT2G03670 Uniprot:Q9ZPR1
Length = 603
Score = 436 (158.5 bits), Expect = 4.6e-41, P = 4.6e-41
Identities = 88/213 (41%), Positives = 126/213 (59%)
Query: 150 IDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYG 209
+ PS+ E P VT++DVGG K+ +K+++ VE P+ H FVK+GI P +G+L +G
Sbjct: 268 VGPSINRGITVEIPKVTWDDVGGLKDLKKKLQQAVEWPIKHSAAFVKMGISPMRGILLHG 327
Query: 210 PPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDE 269
PPG KT LA+A AN A F + +EL YVGEG ++R FQ AR I+FFDE
Sbjct: 328 PPGCSKTTLAKAAANAAQASFFSLSCAELFSMYVGEGEALLRNTFQRARLASPSIIFFDE 387
Query: 270 VDAIGGARFDDGVGGDNEV-QRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPG 328
D + R D+ + V +R + ++ ++DG + I VL ATNRP +D AL+RPG
Sbjct: 388 ADVVACKRGDESSSNSSTVGERLLSTLLTEMDGLEEAKGILVLAATNRPYAIDAALMRPG 447
Query: 329 RLDRKVEFGLPDLESRTQIFKIHTRTMNCERDI 361
R D + PDLE+R +I ++HTR M D+
Sbjct: 448 RFDLVLYVPPPDLEARFEILQVHTRNMTLGDDV 480
Score = 290 (107.1 bits), Expect = 2.2e-23, P = 2.2e-23
Identities = 65/211 (30%), Positives = 111/211 (52%)
Query: 169 DVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDA 228
++GG + ++ +RE++ P +P + LG+ P+G+L YGPPGTGKT L RAV DA
Sbjct: 23 EIGGNERALQALRELIIFPFRYPLEARTLGLKWPRGLLLYGPPGTGKTSLVRAVVQECDA 82
Query: 229 CFIRVIGSELVQKYVGEGARMVRELFQMARSK----KACIVFFDEVDAIGGARFDDGVGG 284
I + + + + GE +++RE F A S K ++F DE+D + R D
Sbjct: 83 HLIVLSPHSVHRAHAGESEKVLREAFAEASSHAVSDKPSVIFIDEIDVLCPRR-DARREQ 141
Query: 285 DNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESR 344
D + + +++ + + V+ +TNR D +DPAL R GR D VE P+ E R
Sbjct: 142 DVRIASQLFTLMDSNKPSSSAPRVVVVASTNRVDAIDPALRRAGRFDALVEVSTPNEEDR 201
Query: 345 TQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
+I +++T+ +N + + + ++ C G
Sbjct: 202 LKILQLYTKKVNLDPSVDLQAIAISCNGYVG 232
WARNING: HSPs involving 476 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.138 0.409 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 420 420 0.00083 118 3 11 22 0.40 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 726
No. of states in DFA: 606 (64 KB)
Total size of DFA: 252 KB (2136 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 37.98u 0.13s 38.11t Elapsed: 00:00:02
Total cpu time: 38.01u 0.13s 38.14t Elapsed: 00:00:02
Start: Sat May 11 13:52:24 2013 End: Sat May 11 13:52:26 2013
WARNINGS ISSUED: 2