BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014712
(420 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O64982|PRS7_PRUPE 26S protease regulatory subunit 7 OS=Prunus persica GN=RPT1 PE=2
SV=1
Length = 425
Score = 753 bits (1945), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/375 (98%), Positives = 373/375 (99%), Gaps = 1/375 (0%)
Query: 1 MAPEPEDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKE 60
MAPEPED IKDEKNPRPLDEDDIALLKTYGLGPYST IKKAEKE+KD+AKKVNDLCGIKE
Sbjct: 1 MAPEPED-IKDEKNPRPLDEDDIALLKTYGLGPYSTHIKKAEKEVKDLAKKVNDLCGIKE 59
Query: 61 SDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGD 120
SDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSED+KYVINVKQIAKFVVGLGD
Sbjct: 60 SDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDAKYVINVKQIAKFVVGLGD 119
Query: 121 KVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKM 180
KVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKM
Sbjct: 120 KVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKM 179
Query: 181 REVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQ 240
REVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQ
Sbjct: 180 REVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQ 239
Query: 241 KYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLD 300
KYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLD
Sbjct: 240 KYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLD 299
Query: 301 GFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERD 360
GFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERD
Sbjct: 300 GFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERD 359
Query: 361 IRFELLSRLCPNSTG 375
IRFELL+RLCPNSTG
Sbjct: 360 IRFELLARLCPNSTG 374
>sp|Q9FXT9|PRS7_ORYSJ 26S protease regulatory subunit 7 OS=Oryza sativa subsp. japonica
GN=RPT1A PE=2 SV=1
Length = 426
Score = 746 bits (1925), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/375 (96%), Positives = 371/375 (98%)
Query: 1 MAPEPEDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKE 60
MAPEPED+I +EKNPRPLDEDDIALLKTYGLGPYSTSIKK EKEIK+MAKK+NDLCGIKE
Sbjct: 1 MAPEPEDDIMNEKNPRPLDEDDIALLKTYGLGPYSTSIKKVEKEIKEMAKKINDLCGIKE 60
Query: 61 SDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGD 120
SDTGLA PSQWDLVSDKQMMQEEQPLQVARCTKII+PN++D+KYVINVKQIAKFVVGLGD
Sbjct: 61 SDTGLAPPSQWDLVSDKQMMQEEQPLQVARCTKIISPNTDDAKYVINVKQIAKFVVGLGD 120
Query: 121 KVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKM 180
KVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKM
Sbjct: 121 KVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKM 180
Query: 181 REVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQ 240
REVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQ
Sbjct: 181 REVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQ 240
Query: 241 KYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLD 300
KYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLD
Sbjct: 241 KYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLD 300
Query: 301 GFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERD 360
GFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLE RTQIFKIHTRTMNCERD
Sbjct: 301 GFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERD 360
Query: 361 IRFELLSRLCPNSTG 375
IRFELL+RLCPNSTG
Sbjct: 361 IRFELLARLCPNSTG 375
>sp|Q41365|PRS7_SPIOL 26S protease regulatory subunit 7 OS=Spinacia oleracea GN=RPT1 PE=2
SV=1
Length = 426
Score = 744 bits (1921), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/375 (96%), Positives = 369/375 (98%)
Query: 1 MAPEPEDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKE 60
MA E ED++KDEKNPRPLDEDDIALLKTYGLGPYS SIKK EKEIKDM+KKVNDL GIKE
Sbjct: 1 MAIEHEDDLKDEKNPRPLDEDDIALLKTYGLGPYSASIKKVEKEIKDMSKKVNDLIGIKE 60
Query: 61 SDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGD 120
SDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIINPN+ED+KYVINVKQIAKFVVGLGD
Sbjct: 61 SDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNTEDAKYVINVKQIAKFVVGLGD 120
Query: 121 KVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKM 180
KVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKM
Sbjct: 121 KVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKM 180
Query: 181 REVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQ 240
REVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQ
Sbjct: 181 REVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQ 240
Query: 241 KYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLD 300
KYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLD
Sbjct: 241 KYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLD 300
Query: 301 GFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERD 360
GFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLE RTQIFKIHTRTMNCERD
Sbjct: 301 GFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERD 360
Query: 361 IRFELLSRLCPNSTG 375
IRFELL+RLCPNSTG
Sbjct: 361 IRFELLARLCPNSTG 375
>sp|Q9SSB5|PRS7A_ARATH 26S protease regulatory subunit 7 homolog A OS=Arabidopsis thaliana
GN=RPT1A PE=2 SV=1
Length = 426
Score = 739 bits (1909), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/375 (96%), Positives = 368/375 (98%)
Query: 1 MAPEPEDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKE 60
M + EDEI+DEKNPRPLDEDDIALLKTYGLGPYS IKK EKEIKD+AKK+NDLCGIKE
Sbjct: 1 MVRDIEDEIRDEKNPRPLDEDDIALLKTYGLGPYSAPIKKVEKEIKDLAKKINDLCGIKE 60
Query: 61 SDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGD 120
SDTGLA PSQWDLVSDKQMMQEEQPLQVARCTKII+PN+ED+KYVINVKQIAKFVVGLGD
Sbjct: 61 SDTGLAPPSQWDLVSDKQMMQEEQPLQVARCTKIISPNTEDAKYVINVKQIAKFVVGLGD 120
Query: 121 KVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKM 180
KVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKM
Sbjct: 121 KVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKM 180
Query: 181 REVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQ 240
REVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQ
Sbjct: 181 REVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQ 240
Query: 241 KYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLD 300
KYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLD
Sbjct: 241 KYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLD 300
Query: 301 GFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERD 360
GFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERD
Sbjct: 301 GFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERD 360
Query: 361 IRFELLSRLCPNSTG 375
IRFELL+RLCPNSTG
Sbjct: 361 IRFELLARLCPNSTG 375
>sp|Q86JA1|PRS7_DICDI 26S protease regulatory subunit 7 OS=Dictyostelium discoideum
GN=psmC2 PE=1 SV=1
Length = 428
Score = 629 bits (1622), Expect = e-179, Method: Compositional matrix adjust.
Identities = 301/370 (81%), Positives = 329/370 (88%)
Query: 6 EDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGL 65
EDE+ +E P LDE DIALLK+YG+GPYS SI+ E++IK M KVN+LCGIKESDTG+
Sbjct: 8 EDELLNETAPVALDEGDIALLKSYGVGPYSKSIRILEEDIKKMTSKVNELCGIKESDTGI 67
Query: 66 AAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPT 125
PSQWDLV DK EE PLQVARCTKII+ ++KY+I VKQIAKFVV LGDK+SPT
Sbjct: 68 GPPSQWDLVVDKTSAHEEPPLQVARCTKIIDVGKPNAKYIITVKQIAKFVVALGDKLSPT 127
Query: 126 DIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVE 185
D+EEG+RVGVDRNKYQIQIPLPPKID SVTMM VEEKPD+TY DVGGCKEQIEK+REVVE
Sbjct: 128 DVEEGIRVGVDRNKYQIQIPLPPKIDASVTMMQVEEKPDITYKDVGGCKEQIEKLREVVE 187
Query: 186 LPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGE 245
+P+LHPEKFV LGIDPPKGVL YGPPGTGKTL ARAVANRTDA F+RVIGSELVQKYVGE
Sbjct: 188 MPLLHPEKFVNLGIDPPKGVLMYGPPGTGKTLCARAVANRTDAAFVRVIGSELVQKYVGE 247
Query: 246 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDAR 305
GARMVR+LFQMARSKKACI+FFDEVDAIGGARFDDG GGDNEVQRTMLE++NQLDGFD R
Sbjct: 248 GARMVRDLFQMARSKKACIIFFDEVDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPR 307
Query: 306 GNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFEL 365
GNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLE R IF IH +TM+C RDIRFEL
Sbjct: 308 GNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRAHIFTIHAKTMSCARDIRFEL 367
Query: 366 LSRLCPNSTG 375
L+RLCPNSTG
Sbjct: 368 LARLCPNSTG 377
>sp|P46471|PRS7_MOUSE 26S protease regulatory subunit 7 OS=Mus musculus GN=Psmc2 PE=1
SV=5
Length = 433
Score = 626 bits (1614), Expect = e-178, Method: Compositional matrix adjust.
Identities = 297/370 (80%), Positives = 332/370 (89%)
Query: 6 EDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGL 65
++E KD+K R LDE DIALLKTYG YS IK+ E +I+ + KK+N+L GIKESDTGL
Sbjct: 13 KEEEKDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGL 72
Query: 66 AAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPT 125
A P+ WDL +DKQ +Q EQPLQVARCTKIIN +SED KY+INVKQ AKFVV L D+V+PT
Sbjct: 73 APPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPT 132
Query: 126 DIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVE 185
DIEEGMRVGVDRNKYQI IPLPPKIDP+VTMM VEEKPDVTY+DVGGCKEQIEK+REVVE
Sbjct: 133 DIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVE 192
Query: 186 LPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGE 245
P+LHPE+FV LGI+PPKGVL +GPPGTGKTL ARAVANRTDACFIRVIGSELVQKYVGE
Sbjct: 193 TPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGE 252
Query: 246 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDAR 305
GARMVRELF+MAR+KKAC++FFDE+DAIGGARFDDG GGDNEVQRTMLE++NQLDGFD R
Sbjct: 253 GARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPR 312
Query: 306 GNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFEL 365
GNIKVLMATNRPDTLDPAL+RPGRLDRK+EF LPDLE RT IFKIH R+M+ ERDIRFEL
Sbjct: 313 GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFEL 372
Query: 366 LSRLCPNSTG 375
L+RLCPNSTG
Sbjct: 373 LARLCPNSTG 382
>sp|Q4R4R0|PRS7_MACFA 26S protease regulatory subunit 7 OS=Macaca fascicularis GN=PSMC2
PE=2 SV=3
Length = 433
Score = 625 bits (1613), Expect = e-178, Method: Compositional matrix adjust.
Identities = 299/370 (80%), Positives = 332/370 (89%), Gaps = 1/370 (0%)
Query: 6 EDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGL 65
EDE KD+K R LDE DIALLKTYG YS IK+ E +I+ + KK+N+L GIKESDTGL
Sbjct: 14 EDE-KDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGL 72
Query: 66 AAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPT 125
A P+ WDL +DKQ +Q EQPLQVARCTKIIN +SED KY+INVKQ AKFVV L D+V+PT
Sbjct: 73 APPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPT 132
Query: 126 DIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVE 185
DIEEGMRVGVDRNKYQI IPLPPKIDP+VTMM VEEKPDVTY+DVGGCKEQIEK+REVVE
Sbjct: 133 DIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVE 192
Query: 186 LPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGE 245
P+LHPE+FV LGI+PPKGVL +GPPGTGKTL ARAVANRTDACFIRVIGSELVQKYVGE
Sbjct: 193 TPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGE 252
Query: 246 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDAR 305
GARMVRELF+MAR+KKAC++FFDE+DAIGGARFDDG GGDNEVQRTMLE++NQLDGFD R
Sbjct: 253 GARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPR 312
Query: 306 GNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFEL 365
GNIKVLMATNRPDTLDPAL+RPGRLDRK+EF LPDLE RT IFKIH R+M+ ERDIRFEL
Sbjct: 313 GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFEL 372
Query: 366 LSRLCPNSTG 375
L+RLCPNSTG
Sbjct: 373 LARLCPNSTG 382
>sp|P35998|PRS7_HUMAN 26S protease regulatory subunit 7 OS=Homo sapiens GN=PSMC2 PE=1
SV=3
Length = 433
Score = 625 bits (1613), Expect = e-178, Method: Compositional matrix adjust.
Identities = 299/370 (80%), Positives = 332/370 (89%), Gaps = 1/370 (0%)
Query: 6 EDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGL 65
EDE KD+K R LDE DIALLKTYG YS IK+ E +I+ + KK+N+L GIKESDTGL
Sbjct: 14 EDE-KDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGL 72
Query: 66 AAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPT 125
A P+ WDL +DKQ +Q EQPLQVARCTKIIN +SED KY+INVKQ AKFVV L D+V+PT
Sbjct: 73 APPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPT 132
Query: 126 DIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVE 185
DIEEGMRVGVDRNKYQI IPLPPKIDP+VTMM VEEKPDVTY+DVGGCKEQIEK+REVVE
Sbjct: 133 DIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVE 192
Query: 186 LPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGE 245
P+LHPE+FV LGI+PPKGVL +GPPGTGKTL ARAVANRTDACFIRVIGSELVQKYVGE
Sbjct: 193 TPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGE 252
Query: 246 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDAR 305
GARMVRELF+MAR+KKAC++FFDE+DAIGGARFDDG GGDNEVQRTMLE++NQLDGFD R
Sbjct: 253 GARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPR 312
Query: 306 GNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFEL 365
GNIKVLMATNRPDTLDPAL+RPGRLDRK+EF LPDLE RT IFKIH R+M+ ERDIRFEL
Sbjct: 313 GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFEL 372
Query: 366 LSRLCPNSTG 375
L+RLCPNSTG
Sbjct: 373 LARLCPNSTG 382
>sp|Q5E9F9|PRS7_BOVIN 26S protease regulatory subunit 7 OS=Bos taurus GN=PSMC2 PE=2 SV=3
Length = 433
Score = 625 bits (1613), Expect = e-178, Method: Compositional matrix adjust.
Identities = 299/370 (80%), Positives = 332/370 (89%), Gaps = 1/370 (0%)
Query: 6 EDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGL 65
EDE KD+K R LDE DIALLKTYG YS IK+ E +I+ + KK+N+L GIKESDTGL
Sbjct: 14 EDE-KDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGL 72
Query: 66 AAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPT 125
A P+ WDL +DKQ +Q EQPLQVARCTKIIN +SED KY+INVKQ AKFVV L D+V+PT
Sbjct: 73 APPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPT 132
Query: 126 DIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVE 185
DIEEGMRVGVDRNKYQI IPLPPKIDP+VTMM VEEKPDVTY+DVGGCKEQIEK+REVVE
Sbjct: 133 DIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVE 192
Query: 186 LPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGE 245
P+LHPE+FV LGI+PPKGVL +GPPGTGKTL ARAVANRTDACFIRVIGSELVQKYVGE
Sbjct: 193 TPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGE 252
Query: 246 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDAR 305
GARMVRELF+MAR+KKAC++FFDE+DAIGGARFDDG GGDNEVQRTMLE++NQLDGFD R
Sbjct: 253 GARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPR 312
Query: 306 GNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFEL 365
GNIKVLMATNRPDTLDPAL+RPGRLDRK+EF LPDLE RT IFKIH R+M+ ERDIRFEL
Sbjct: 313 GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFEL 372
Query: 366 LSRLCPNSTG 375
L+RLCPNSTG
Sbjct: 373 LARLCPNSTG 382
>sp|Q63347|PRS7_RAT 26S protease regulatory subunit 7 OS=Rattus norvegicus GN=Psmc2
PE=1 SV=3
Length = 433
Score = 622 bits (1604), Expect = e-177, Method: Compositional matrix adjust.
Identities = 298/370 (80%), Positives = 331/370 (89%), Gaps = 1/370 (0%)
Query: 6 EDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGL 65
EDE KD+K R LDE DIALLKTYG YS IK+ E +I+ + KK+N+L GIKESDTGL
Sbjct: 14 EDE-KDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGL 72
Query: 66 AAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPT 125
A P+ WDL +DKQ +Q EQPLQVARCTKIIN +SED KY+INVKQ AKFVV L D+V+PT
Sbjct: 73 APPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPT 132
Query: 126 DIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVE 185
DIEEGMRVGVDRNKYQI IPLPPKIDP+VTMM VEEKPDVTY+DVGGCKEQIEK+REVVE
Sbjct: 133 DIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVE 192
Query: 186 LPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGE 245
P+LHPE+FV LGI+PPKGVL +GPPGTGKTL ARAVANRTDACFI VIGSELVQKYVGE
Sbjct: 193 TPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIPVIGSELVQKYVGE 252
Query: 246 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDAR 305
GARMVRELF+MAR+KKAC++FFDE+DAIGGARFDDG GGDNEVQRTMLE++NQLDGFD R
Sbjct: 253 GARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPR 312
Query: 306 GNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFEL 365
GNIKVLMATNRPDTLDPAL+RPGRLDRK+EF LPDLE RT IFKIH R+M+ ERDIRFEL
Sbjct: 313 GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFEL 372
Query: 366 LSRLCPNSTG 375
L+RLCPNSTG
Sbjct: 373 LARLCPNSTG 382
>sp|Q5R8D7|PRS7_PONAB 26S protease regulatory subunit 7 OS=Pongo abelii GN=PSMC2 PE=2
SV=3
Length = 433
Score = 621 bits (1601), Expect = e-177, Method: Compositional matrix adjust.
Identities = 297/370 (80%), Positives = 330/370 (89%), Gaps = 1/370 (0%)
Query: 6 EDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGL 65
EDE KD+K R LDE DIALLKTYG YS IK+ E +I+ + KK+N+L GIKESDTGL
Sbjct: 14 EDE-KDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGL 72
Query: 66 AAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPT 125
A P+ WDL +DKQ +Q EQPLQVARCTKII +SED KY+INVKQ AKFVV L D+V+PT
Sbjct: 73 APPALWDLAADKQTLQSEQPLQVARCTKIITADSEDPKYIINVKQFAKFVVDLSDQVAPT 132
Query: 126 DIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVE 185
DIEEGMRVGVDRNKYQI IPLPPKIDP+VTMM VEEKPDVTY+DVGGCKEQIEK+REVVE
Sbjct: 133 DIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVE 192
Query: 186 LPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGE 245
P+LHPE+FV LGI+PPKGVL +GPPGTGKTL ARAVANRTDACFIRVIGSELVQKYVGE
Sbjct: 193 TPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGE 252
Query: 246 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDAR 305
GARMVRELF+MAR+KKAC++FFDE+DAIGGARFDDG GGDNEVQRTMLE++NQLDGFD R
Sbjct: 253 GARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPR 312
Query: 306 GNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFEL 365
GNIKVLMATNRPDTLDPAL+RPGRLDRK+EF LPDLE RT I KIH R+M+ ERDIRFEL
Sbjct: 313 GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHILKIHARSMSVERDIRFEL 372
Query: 366 LSRLCPNSTG 375
L+RLCPNSTG
Sbjct: 373 LARLCPNSTG 382
>sp|P46472|PRS7_XENLA 26S protease regulatory subunit 7 OS=Xenopus laevis GN=psmc2 PE=2
SV=1
Length = 433
Score = 620 bits (1600), Expect = e-177, Method: Compositional matrix adjust.
Identities = 293/360 (81%), Positives = 325/360 (90%)
Query: 16 RPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVS 75
R LDE DIALLKTYG YS IK+ E +I+ + KK+N+L GIKESDTGLA P+ WDL +
Sbjct: 23 RSLDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAA 82
Query: 76 DKQMMQEEQPLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGV 135
DKQ +Q EQPLQVARCTKIIN +SED KY+INVKQ AKFVV L D+V+PTDIEEGMRVGV
Sbjct: 83 DKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGV 142
Query: 136 DRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFV 195
DRNKYQI IPLPPKIDP+VTMM VEEKPDVTY+DVGGCKEQIEK+REVVE P+LHPE+FV
Sbjct: 143 DRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFV 202
Query: 196 KLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQ 255
LGI+PPKGVL +GPPGTGKTL ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELF+
Sbjct: 203 NLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFE 262
Query: 256 MARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATN 315
MAR+KKAC++FFDE+DAIGGARFDDG GGDNEVQRTMLE++NQLDGFD RGNIKVLMATN
Sbjct: 263 MARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATN 322
Query: 316 RPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
RPDTLDPAL+RPGRLDRK+EF LPDLE RT IFKIH R+M+ ERDIRFELL+RLCPNSTG
Sbjct: 323 RPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTG 382
>sp|Q9SSB4|PRS7B_ARATH 26S protease regulatory subunit 7 homolog B OS=Arabidopsis thaliana
GN=RPT1B PE=2 SV=2
Length = 464
Score = 614 bits (1583), Expect = e-175, Method: Compositional matrix adjust.
Identities = 293/343 (85%), Positives = 322/343 (93%), Gaps = 1/343 (0%)
Query: 33 PYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCT 92
PYS IKK EKEI ++A+K+ +L GIKESDTGLA P+QWDLVSDKQMMQEEQPL VA CT
Sbjct: 71 PYSARIKKVEKEINELAEKICNL-GIKESDTGLAPPNQWDLVSDKQMMQEEQPLLVATCT 129
Query: 93 KIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDP 152
+II+PN+ED+KYV+++K+I K+VVGLGDK SPTDIE GMRVGVD+ KYQIQIPLPPKIDP
Sbjct: 130 QIISPNTEDAKYVVDIKKIGKYVVGLGDKASPTDIEAGMRVGVDQKKYQIQIPLPPKIDP 189
Query: 153 SVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPG 212
SVTMMTVEEKPD TY+D+GGCKEQIEK+REVVELPMLHPEKFV+LGIDPPKGVLCYGPPG
Sbjct: 190 SVTMMTVEEKPDATYSDIGGCKEQIEKIREVVELPMLHPEKFVRLGIDPPKGVLCYGPPG 249
Query: 213 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDA 272
+GKTL+ARAVANRT ACFIRV+GSELVQKY+GEGARMVRELFQMARSKKACI+FFDE+DA
Sbjct: 250 SGKTLVARAVANRTGACFIRVVGSELVQKYIGEGARMVRELFQMARSKKACILFFDEIDA 309
Query: 273 IGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDR 332
IGGARFDDGVG DNEVQRTMLEI+ QLDGFDARGNIKVLMATNRPD LDPALLRPGRLDR
Sbjct: 310 IGGARFDDGVGSDNEVQRTMLEILYQLDGFDARGNIKVLMATNRPDILDPALLRPGRLDR 369
Query: 333 KVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
KVEF LPDLE RTQIFKIHTRTM+CERDIRFELL+ LCPNSTG
Sbjct: 370 KVEFCLPDLEGRTQIFKIHTRTMSCERDIRFELLAGLCPNSTG 412
>sp|Q18787|PRS7_CAEEL 26S protease regulatory subunit 7 OS=Caenorhabditis elegans
GN=rpt-1 PE=1 SV=1
Length = 435
Score = 597 bits (1538), Expect = e-170, Method: Compositional matrix adjust.
Identities = 280/370 (75%), Positives = 324/370 (87%)
Query: 6 EDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGL 65
+D ++EKN + LDE DIA+LK YG GPY+ +K + +I++ KKVN+L G+KESDTGL
Sbjct: 15 DDTKEEEKNFQALDEGDIAVLKRYGQGPYAEQLKTLDADIENCLKKVNELSGVKESDTGL 74
Query: 66 AAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPT 125
A P+ WD+ +DKQ MQ+EQPLQVARCTKII + D +Y+INVKQ AKFVV L D V+PT
Sbjct: 75 APPALWDIAADKQAMQQEQPLQVARCTKIITSDKHDPRYLINVKQFAKFVVDLADSVAPT 134
Query: 126 DIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVE 185
DIEEGMRVGVDRNKYQI +PLP KIDP+VTMM VEEKPDVTY+DVGGCK+QIEK+REVVE
Sbjct: 135 DIEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVEEKPDVTYSDVGGCKDQIEKLREVVE 194
Query: 186 LPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGE 245
P+LHPE++V LGI+PPKGVL YGPPGTGKTL ARAVANRTDACFIRVIGSELVQKYVGE
Sbjct: 195 TPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGE 254
Query: 246 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDAR 305
GARMVRELF+MAR+KKAC++FFDE+DA+GGARFDDG GGDNEVQRTMLE++NQLDGFD R
Sbjct: 255 GARMVRELFEMARTKKACLIFFDEIDAVGGARFDDGQGGDNEVQRTMLELINQLDGFDPR 314
Query: 306 GNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFEL 365
GNIKVLMATNRPDTLDPAL+RPGRLDRKVEF LPDL R I KIH + M+ ERDIR++L
Sbjct: 315 GNIKVLMATNRPDTLDPALMRPGRLDRKVEFALPDLAGRAHILKIHAKQMSVERDIRYDL 374
Query: 366 LSRLCPNSTG 375
L+RLCPNSTG
Sbjct: 375 LARLCPNSTG 384
>sp|O42931|PRS7_SCHPO 26S protease regulatory subunit 7 homolog OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=rpt1 PE=1 SV=2
Length = 438
Score = 575 bits (1483), Expect = e-163, Method: Compositional matrix adjust.
Identities = 273/370 (73%), Positives = 320/370 (86%), Gaps = 2/370 (0%)
Query: 8 EIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAA 67
E +++KNP PLDE DI LLK+Y GPY+ + +++ + + K++ND GIKESDTGLA
Sbjct: 17 EEENDKNPPPLDEGDIELLKSYATGPYARELAAIKEDTEAVLKRINDTVGIKESDTGLAP 76
Query: 68 PSQWDLVSDKQMMQEEQPLQVARCTKIIN--PNSEDSKYVINVKQIAKFVVGLGDKVSPT 125
S WD+ +D+Q M EEQPLQVARCTKII ++E + YVIN+KQIAKFVV LG++VSPT
Sbjct: 77 ISFWDVAADRQRMSEEQPLQVARCTKIIENEQSAEKNAYVINLKQIAKFVVSLGERVSPT 136
Query: 126 DIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVE 185
DIEEGMRVG DRNKY IQ+PLPPKIDPSVTMM VEEKPDVTY DVGGCKEQIE++REVVE
Sbjct: 137 DIEEGMRVGCDRNKYAIQLPLPPKIDPSVTMMQVEEKPDVTYGDVGGCKEQIERLREVVE 196
Query: 186 LPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGE 245
LP+L PE+FVKLGIDPPKG++ YGPPGTGKTL ARAVANRTDA FIRVIGSELVQKYVGE
Sbjct: 197 LPLLSPERFVKLGIDPPKGIMLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGE 256
Query: 246 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDAR 305
GARMVRELF+MAR+KKACI+FFDE+DAIGGARFDDG GGDNEVQRTMLE++ QLDGFD R
Sbjct: 257 GARMVRELFEMARTKKACIIFFDEIDAIGGARFDDGAGGDNEVQRTMLELITQLDGFDPR 316
Query: 306 GNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFEL 365
GNIKVL ATNRP+TLD AL+RPGR+DRKVEFGLPDLE R I +IH ++M ++DIR+EL
Sbjct: 317 GNIKVLFATNRPNTLDEALMRPGRIDRKVEFGLPDLEGRAHILRIHAKSMAIDKDIRWEL 376
Query: 366 LSRLCPNSTG 375
++RLCP+ TG
Sbjct: 377 IARLCPSQTG 386
>sp|P33299|PRS7_YEAST 26S protease regulatory subunit 7 homolog OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RPT1 PE=1
SV=1
Length = 467
Score = 565 bits (1457), Expect = e-160, Method: Compositional matrix adjust.
Identities = 269/389 (69%), Positives = 316/389 (81%), Gaps = 30/389 (7%)
Query: 17 PLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSD 76
PL E DI +LK+YG PY+ +K+ E ++KD+ ++ + G+KESDTGLA WD++ D
Sbjct: 28 PLTEGDIQVLKSYGAAPYAAKLKQTENDLKDIEARIKEKAGVKESDTGLAPSHLWDIMGD 87
Query: 77 KQMMQEEQPLQVARCTKIINPNSED------------------------------SKYVI 106
+Q + EE PLQVARCTKII N E +KYVI
Sbjct: 88 RQRLGEEHPLQVARCTKIIKGNGESDETTTDNNNSGNSNSNSNQQSTDADEDDEDAKYVI 147
Query: 107 NVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVT 166
N+KQIAKFVVGLG++VSPTDIEEGMRVGVDR+KY I++PLPP+IDPSVTMMTVEEKPDVT
Sbjct: 148 NLKQIAKFVVGLGERVSPTDIEEGMRVGVDRSKYNIELPLPPRIDPSVTMMTVEEKPDVT 207
Query: 167 YNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRT 226
Y+DVGGCK+QIEK+REVVELP+L PE+F LGIDPPKG+L YGPPGTGKTL ARAVANRT
Sbjct: 208 YSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLCARAVANRT 267
Query: 227 DACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDN 286
DA FIRVIGSELVQKYVGEGARMVRELF+MAR+KKACI+FFDE+DA+GGARFDDG GGDN
Sbjct: 268 DATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARFDDGAGGDN 327
Query: 287 EVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQ 346
EVQRTMLE++ QLDGFD RGNIKV+ ATNRP+TLDPALLRPGR+DRKVEF LPDLE R
Sbjct: 328 EVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEGRAN 387
Query: 347 IFKIHTRTMNCERDIRFELLSRLCPNSTG 375
IF+IH+++M+ ER IR+EL+SRLCPNSTG
Sbjct: 388 IFRIHSKSMSVERGIRWELISRLCPNSTG 416
>sp|P54814|PRS8_MANSE 26S protease regulatory subunit 8 OS=Manduca sexta PE=2 SV=1
Length = 402
Score = 319 bits (817), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 173/349 (49%), Positives = 228/349 (65%), Gaps = 8/349 (2%)
Query: 27 KTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPL 86
K G PY I K E+ +A+K +L ++ L A + L + Q++QE
Sbjct: 12 KGEGFRPYY--ITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRM-LREELQLLQE---- 64
Query: 87 QVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPL 146
Q + +++ P + K ++ V KFVV L V D+ RV + Y + L
Sbjct: 65 QGSYVGEVVKP-MDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKIL 123
Query: 147 PPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVL 206
P K+DP V++M VE+ PD TY VGG +QI++++EV+ELP+ HPE F LGI PKGVL
Sbjct: 124 PNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVL 183
Query: 207 CYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVF 266
YGPPGTGKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR I+F
Sbjct: 184 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIF 243
Query: 267 FDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLR 326
DE+D+IG +R + G GGD+EVQRTMLE++NQLDGF+A NIKV+MATNR D LDPALLR
Sbjct: 244 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLR 303
Query: 327 PGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
PGR+DRK+EF P+ E+R I KIH+R MN R I ++ L P ++G
Sbjct: 304 PGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASG 352
>sp|O18413|PRS8_DROME 26S protease regulatory subunit 8 OS=Drosophila melanogaster
GN=Pros45 PE=1 SV=2
Length = 405
Score = 318 bits (816), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 171/346 (49%), Positives = 228/346 (65%), Gaps = 6/346 (1%)
Query: 30 GLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVA 89
G G S I+K E+ +A+K +L ++ L A + L + Q++QE Q +
Sbjct: 16 GEGFRSYYIQKIEELQLVVAEKHQNLRRLQAQRNELNAKVRM-LREELQLLQE----QGS 70
Query: 90 RCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPK 149
+++ P + K ++ V KFVV L + D+ RV + Y + LP K
Sbjct: 71 YVGEVVKP-MDKKKVLVKVHPEGKFVVDLDKNIDINDVTPNCRVALRNESYTLHKILPNK 129
Query: 150 IDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYG 209
+DP V++M VE+ PD TY VGG +QI++++EV+ELP+ HPE F LGI PKGVL YG
Sbjct: 130 VDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYG 189
Query: 210 PPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDE 269
PPGTGKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR I+F DE
Sbjct: 190 PPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDE 249
Query: 270 VDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGR 329
+D+IG +R + G GGD+EVQRTMLE++NQLDGF+A NIKV+MATNR D LDPALLRPGR
Sbjct: 250 IDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGR 309
Query: 330 LDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
+DRK+EF P+ E+R I KIH+R MN R I ++ L P ++G
Sbjct: 310 IDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASG 355
>sp|P62198|PRS8_RAT 26S protease regulatory subunit 8 OS=Rattus norvegicus GN=Psmc5
PE=1 SV=1
Length = 406
Score = 313 bits (802), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 153/273 (56%), Positives = 195/273 (71%)
Query: 103 KYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEK 162
K ++ V KFVV + + D+ RV + + Y + LP K+DP V++M VE+
Sbjct: 84 KVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKV 143
Query: 163 PDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAV 222
PD TY +GG +QI++++EV+ELP+ HPE F LGI PKGVL YGPPGTGKTLLARAV
Sbjct: 144 PDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAV 203
Query: 223 ANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGV 282
A+ TD FIRV GSELVQK++GEGARMVRELF MAR I+F DE+D+IG +R + G
Sbjct: 204 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGS 263
Query: 283 GGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLE 342
GGD+EVQRTMLE++NQLDGF+A NIKV+MATNR D LD ALLRPGR+DRK+EF P+ E
Sbjct: 264 GGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEE 323
Query: 343 SRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
+R I KIH+R MN R I ++ L P ++G
Sbjct: 324 ARLDILKIHSRKMNLTRGINLRKIAELMPGASG 356
>sp|P62197|PRS8_PIG 26S protease regulatory subunit 8 OS=Sus scrofa GN=PSMC5 PE=2 SV=1
Length = 406
Score = 313 bits (802), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 153/273 (56%), Positives = 195/273 (71%)
Query: 103 KYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEK 162
K ++ V KFVV + + D+ RV + + Y + LP K+DP V++M VE+
Sbjct: 84 KVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKV 143
Query: 163 PDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAV 222
PD TY +GG +QI++++EV+ELP+ HPE F LGI PKGVL YGPPGTGKTLLARAV
Sbjct: 144 PDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAV 203
Query: 223 ANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGV 282
A+ TD FIRV GSELVQK++GEGARMVRELF MAR I+F DE+D+IG +R + G
Sbjct: 204 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGS 263
Query: 283 GGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLE 342
GGD+EVQRTMLE++NQLDGF+A NIKV+MATNR D LD ALLRPGR+DRK+EF P+ E
Sbjct: 264 GGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEE 323
Query: 343 SRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
+R I KIH+R MN R I ++ L P ++G
Sbjct: 324 ARLDILKIHSRKMNLTRGINLRKIAELMPGASG 356
>sp|P62196|PRS8_MOUSE 26S protease regulatory subunit 8 OS=Mus musculus GN=Psmc5 PE=1
SV=1
Length = 406
Score = 313 bits (802), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 153/273 (56%), Positives = 195/273 (71%)
Query: 103 KYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEK 162
K ++ V KFVV + + D+ RV + + Y + LP K+DP V++M VE+
Sbjct: 84 KVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKV 143
Query: 163 PDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAV 222
PD TY +GG +QI++++EV+ELP+ HPE F LGI PKGVL YGPPGTGKTLLARAV
Sbjct: 144 PDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAV 203
Query: 223 ANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGV 282
A+ TD FIRV GSELVQK++GEGARMVRELF MAR I+F DE+D+IG +R + G
Sbjct: 204 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGS 263
Query: 283 GGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLE 342
GGD+EVQRTMLE++NQLDGF+A NIKV+MATNR D LD ALLRPGR+DRK+EF P+ E
Sbjct: 264 GGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEE 323
Query: 343 SRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
+R I KIH+R MN R I ++ L P ++G
Sbjct: 324 ARLDILKIHSRKMNLTRGINLRKIAELMPGASG 356
>sp|P62195|PRS8_HUMAN 26S protease regulatory subunit 8 OS=Homo sapiens GN=PSMC5 PE=1
SV=1
Length = 406
Score = 313 bits (802), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 153/273 (56%), Positives = 195/273 (71%)
Query: 103 KYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEK 162
K ++ V KFVV + + D+ RV + + Y + LP K+DP V++M VE+
Sbjct: 84 KVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKV 143
Query: 163 PDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAV 222
PD TY +GG +QI++++EV+ELP+ HPE F LGI PKGVL YGPPGTGKTLLARAV
Sbjct: 144 PDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAV 203
Query: 223 ANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGV 282
A+ TD FIRV GSELVQK++GEGARMVRELF MAR I+F DE+D+IG +R + G
Sbjct: 204 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGS 263
Query: 283 GGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLE 342
GGD+EVQRTMLE++NQLDGF+A NIKV+MATNR D LD ALLRPGR+DRK+EF P+ E
Sbjct: 264 GGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEE 323
Query: 343 SRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
+R I KIH+R MN R I ++ L P ++G
Sbjct: 324 ARLDILKIHSRKMNLTRGINLRKIAELMPGASG 356
>sp|P62194|PRS8_BOVIN 26S protease regulatory subunit 8 OS=Bos taurus GN=PSMC5 PE=2 SV=1
Length = 406
Score = 313 bits (802), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 153/273 (56%), Positives = 195/273 (71%)
Query: 103 KYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEK 162
K ++ V KFVV + + D+ RV + + Y + LP K+DP V++M VE+
Sbjct: 84 KVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKV 143
Query: 163 PDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAV 222
PD TY +GG +QI++++EV+ELP+ HPE F LGI PKGVL YGPPGTGKTLLARAV
Sbjct: 144 PDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAV 203
Query: 223 ANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGV 282
A+ TD FIRV GSELVQK++GEGARMVRELF MAR I+F DE+D+IG +R + G
Sbjct: 204 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGS 263
Query: 283 GGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLE 342
GGD+EVQRTMLE++NQLDGF+A NIKV+MATNR D LD ALLRPGR+DRK+EF P+ E
Sbjct: 264 GGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEE 323
Query: 343 SRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
+R I KIH+R MN R I ++ L P ++G
Sbjct: 324 ARLDILKIHSRKMNLTRGINLRKIAELMPGASG 356
>sp|Q9C5U3|PRS8A_ARATH 26S protease regulatory subunit 8 homolog A OS=Arabidopsis thaliana
GN=RPT6A PE=2 SV=1
Length = 419
Score = 310 bits (793), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 164/311 (52%), Positives = 211/311 (67%), Gaps = 11/311 (3%)
Query: 72 DLVSDKQMMQEE-QPLQ-----VARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPT 125
+L S +M++EE Q LQ V K++ N K ++ V K+VV + + T
Sbjct: 63 ELNSRVRMLREELQLLQEPGSYVGEVVKVMGKN----KVLVKVHPEGKYVVDIDKSIDIT 118
Query: 126 DIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVE 185
I RV + + Y + + LP K+DP V +M VE+ PD TY+ +GG +QI++++EV+E
Sbjct: 119 KITPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIE 178
Query: 186 LPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGE 245
LP+ HPE F LGI PKGVL YGPPGTGKTLLARAVA+ TD FIRV GSELVQKY+GE
Sbjct: 179 LPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGE 238
Query: 246 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVG-GDNEVQRTMLEIVNQLDGFDA 304
G+RMVRELF MAR I+F DE+D+IG AR + G G GD+EVQRTMLE++NQLDGF+A
Sbjct: 239 GSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEA 298
Query: 305 RGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFE 364
IKVLMATNR D LD ALLRPGR+DRK+EF P+ ESR I KIH+R MN R I +
Sbjct: 299 SNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLK 358
Query: 365 LLSRLCPNSTG 375
++ ++G
Sbjct: 359 KIAEKMNGASG 369
>sp|Q94BQ2|PRS8B_ARATH 26S protease regulatory subunit 8 homolog B OS=Arabidopsis thaliana
GN=RPT6B PE=2 SV=1
Length = 419
Score = 308 bits (790), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 163/311 (52%), Positives = 211/311 (67%), Gaps = 11/311 (3%)
Query: 72 DLVSDKQMMQEE-QPLQ-----VARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPT 125
+L S +M++EE Q LQ V K++ N K ++ V K+VV + + T
Sbjct: 63 ELNSRVRMLREELQLLQEPGSYVGEVVKVMGKN----KVLVKVHPEGKYVVDIDKSIDIT 118
Query: 126 DIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVE 185
+ RV + + Y + + LP K+DP V +M VE+ PD TY+ +GG +QI++++EV+E
Sbjct: 119 KLTPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIE 178
Query: 186 LPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGE 245
LP+ HPE F LGI PKGVL YGPPGTGKTLLARAVA+ TD FIRV GSELVQKY+GE
Sbjct: 179 LPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGE 238
Query: 246 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVG-GDNEVQRTMLEIVNQLDGFDA 304
G+RMVRELF MAR I+F DE+D+IG AR + G G GD+EVQRTMLE++NQLDGF+A
Sbjct: 239 GSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEA 298
Query: 305 RGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFE 364
IKVLMATNR D LD ALLRPGR+DRK+EF P+ ESR I KIH+R MN R I +
Sbjct: 299 SNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLK 358
Query: 365 LLSRLCPNSTG 375
++ ++G
Sbjct: 359 KIAEKMNGASG 369
>sp|O28303|PAN_ARCFU Proteasome-activating nucleotidase OS=Archaeoglobus fulgidus
(strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC
100126) GN=pan PE=1 SV=1
Length = 398
Score = 308 bits (789), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 152/291 (52%), Positives = 200/291 (68%), Gaps = 4/291 (1%)
Query: 85 PLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQI 144
PL V + I+ ED + V+ KFVV ++ +++ G RV +++ I
Sbjct: 62 PLLVGVVSDIL----EDGRVVVKSSTGPKFVVNTSQYINEEELKPGARVALNQQTLAIVN 117
Query: 145 PLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKG 204
LP DP V VEEKP+V+Y D+GG QIE++RE VELP+L PE F ++GI+PPKG
Sbjct: 118 VLPTSKDPMVYGFEVEEKPEVSYEDIGGLDVQIEEIREAVELPLLKPELFAEVGIEPPKG 177
Query: 205 VLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACI 264
VL YGPPGTGKTLLA+AVAN+T A FIRV+GSE VQKY+GEGAR+VRE+FQ+A+ K I
Sbjct: 178 VLLYGPPGTGKTLLAKAVANQTRATFIRVVGSEFVQKYIGEGARLVREVFQLAKEKAPSI 237
Query: 265 VFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPAL 324
+F DE+DAI R + GD EVQRTM++++ +LDGFD RG++KV+ ATNR D LDPA+
Sbjct: 238 IFIDELDAIAARRTNSDTSGDREVQRTMMQLLAELDGFDPRGDVKVIGATNRIDILDPAI 297
Query: 325 LRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
LRPGR DR +E LP E R QIFKIHTR M D+ F+ L+R+ ++G
Sbjct: 298 LRPGRFDRIIEVPLPTFEGRIQIFKIHTRKMKLAEDVDFKELARITEGASG 348
>sp|P46470|PRS8_XENLA 26S protease regulatory subunit 8 OS=Xenopus laevis GN=psmc5 PE=2
SV=2
Length = 461
Score = 308 bits (788), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 153/273 (56%), Positives = 195/273 (71%), Gaps = 1/273 (0%)
Query: 103 KYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEK 162
K ++ V KFVV + + D+ RV + + Y + LP K+DP V++M VE+
Sbjct: 79 KVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKV 138
Query: 163 PDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAV 222
PD TY +GG +QI++++EV+ELP+ HPE F LGI PKGVL YGPPGTGKTLLARAV
Sbjct: 139 PDSTYEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLLARAV 198
Query: 223 ANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGV 282
A+ TD FIRV GSELVQK++GEGARMVRELF MAR I+F DE+D+I G+R + G
Sbjct: 199 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSI-GSRLEGGS 257
Query: 283 GGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLE 342
GGD+EVQRTMLE++NQLDGF+A NIKV+MATNR D LD ALLRPGR+DRK+EF P+ E
Sbjct: 258 GGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEE 317
Query: 343 SRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
+R I KIH+R MN R I ++ L P ++G
Sbjct: 318 ARLDILKIHSRKMNLTRGINLRKIAELMPGASG 350
>sp|Q25544|PRS8_NAEFO 26S protease regulatory subunit 8 homolog OS=Naegleria fowleri PE=2
SV=1
Length = 414
Score = 306 bits (784), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 149/272 (54%), Positives = 195/272 (71%), Gaps = 1/272 (0%)
Query: 105 VINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPD 164
+I + Q K++V + + D+ G+RV + + Y + LP KIDP V++M VE+ PD
Sbjct: 93 LIKISQEGKYIVDIDKSIELKDLTPGVRVALRNDSYALHKILPNKIDPLVSLMKVEKVPD 152
Query: 165 VTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVAN 224
TY VGG EQI++++EV+ELP+ HPE F LGI PKGV+ YGPPGTGKTLLARAVA+
Sbjct: 153 ATYEMVGGLDEQIKEIKEVIELPIKHPELFESLGIAQPKGVIMYGPPGTGKTLLARAVAH 212
Query: 225 RTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGV-G 283
TD FIRV GSELVQKY+GEG++MVRELF MAR I+F DE+D+IG R + G G
Sbjct: 213 HTDCTFIRVSGSELVQKYIGEGSKMVRELFVMAREHAPSIIFMDEIDSIGSTRTEGGKGG 272
Query: 284 GDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLES 343
GD+EVQRTMLE++NQLDGF++ NIK++MATNR D LDPALLRPGR+DRK+EF P+ +
Sbjct: 273 GDSEVQRTMLELLNQLDGFESTQNIKIIMATNRIDILDPALLRPGRIDRKIEFPNPNELA 332
Query: 344 RTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
R I KIH+R MN R I ++ + ++G
Sbjct: 333 RLDILKIHSRRMNLTRGINLRKIASMLGGASG 364
>sp|O17071|PRS10_CAEEL Probable 26S protease regulatory subunit 10B OS=Caenorhabditis
elegans GN=rpt-4 PE=1 SV=2
Length = 406
Score = 303 bits (777), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 152/335 (45%), Positives = 224/335 (66%), Gaps = 9/335 (2%)
Query: 36 TSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKII 95
S ++ E +D+ +K+ DL + T S+ D+ S + + Q +++
Sbjct: 27 NSYRRKLAECRDIEQKLKDLRKKESEMTKQFDKSENDIKSLQSVGQ--------IVGEVL 78
Query: 96 NPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVT 155
SE+ K+++ ++VVG ++ ++++G RV +D I LP ++DP V
Sbjct: 79 KQLSEE-KFIVKATNGPRYVVGCRRSINKEELKQGTRVSLDMTTLTIMRQLPREVDPLVY 137
Query: 156 MMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGK 215
M+ E+ +++Y+DVGG EQI ++REVVELP+++PE F ++GI PPKG L +GPPGTGK
Sbjct: 138 KMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGK 197
Query: 216 TLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGG 275
TLLARAVA++ D F++V+ S +V KY+GE ARM+RE+F AR + CIVF DE+DAIGG
Sbjct: 198 TLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGG 257
Query: 276 ARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVE 335
RF +G D E+QRT++E++NQLDGFD+ G +KV+MATNRPDTLDPALLRPGRLDRK+E
Sbjct: 258 RRFSEGTSADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIE 317
Query: 336 FGLPDLESRTQIFKIHTRTMNCERDIRFELLSRLC 370
GLP+ +SR +I KIH+ + +I FE + +L
Sbjct: 318 IGLPNEQSRLEILKIHSNKITKHGEIDFEAVVKLS 352
>sp|Q01939|PRS8_YEAST 26S protease regulatory subunit 8 homolog OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RPT6 PE=1
SV=4
Length = 405
Score = 301 bits (772), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 159/342 (46%), Positives = 222/342 (64%), Gaps = 12/342 (3%)
Query: 25 LLKTY--GLGPY-STSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQ 81
+L+T+ G+ PY I++ E +I+ + V L + A + + D+ +
Sbjct: 11 VLETHESGIKPYFEQKIQETELKIRSKTENVRRLEAQRN-----ALNDKVRFIKDELRLL 65
Query: 82 EEQPLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQ 141
+E V KI++ D K ++ V+ K++V + ++ D++ RV + + Y
Sbjct: 66 QEPGSYVGEVIKIVS----DKKVLVKVQPEGKYIVDVAKDINVKDLKASQRVCLRSDSYM 121
Query: 142 IQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDP 201
+ L K DP V++M VE+ PD TY+ VGG +QI++++EV+ELP+ HPE F LGI
Sbjct: 122 LHKVLENKADPLVSLMMVEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQ 181
Query: 202 PKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKK 261
PKGV+ YGPPGTGKTLLARAVA+ TD FIRV G+ELVQKY+GEG+RMVRELF MAR
Sbjct: 182 PKGVILYGPPGTGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHA 241
Query: 262 ACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLD 321
I+F DE+D+IG R + GGD+EVQRTMLE++NQLDGF+ NIK++MATNR D LD
Sbjct: 242 PSIIFMDEIDSIGSTRVEGSGGGDSEVQRTMLELLNQLDGFETSKNIKIIMATNRLDILD 301
Query: 322 PALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRF 363
PALLRPGR+DRK+EF P + +R +I +IH+R MN R I
Sbjct: 302 PALLRPGRIDRKIEFPPPSVAARAEILRIHSRKMNLTRGINL 343
>sp|Q0W257|PAN_UNCMA Proteasome-activating nucleotidase OS=Uncultured methanogenic
archaeon RC-I GN=pan PE=3 SV=1
Length = 417
Score = 299 bits (766), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 140/275 (50%), Positives = 190/275 (69%)
Query: 101 DSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVE 160
+ K +I KFVV ++ ++ G +V +++ + LP DPSV M V
Sbjct: 92 NGKMIIKSSTGPKFVVNSSQFINSKEVYPGAKVALNQQSLAVIEVLPTVKDPSVLGMEVV 151
Query: 161 EKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLAR 220
+ P++ Y +GG + QI +++E VELP+L PE F K+GI+PPKGVL YGPPGTGKTLLA+
Sbjct: 152 DSPEIDYQSIGGLEAQINELKETVELPLLKPELFQKVGIEPPKGVLLYGPPGTGKTLLAK 211
Query: 221 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDD 280
AVANRT A FIR+IGSELVQKY+GEGARMVRELF++A+ K I+F DE+D+IG R D
Sbjct: 212 AVANRTKATFIRIIGSELVQKYIGEGARMVRELFELAKEKSPSIIFIDEIDSIGAKRLDS 271
Query: 281 GVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPD 340
GD EVQRT+++++ ++DGFD RGN+++L ATNRPD LDPALLRPGR DR ++ +P
Sbjct: 272 ITSGDREVQRTLVQLLAEMDGFDPRGNVRILAATNRPDILDPALLRPGRFDRMIKVPMPT 331
Query: 341 LESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
E+R QI KIH R MN D+ ++ + S+G
Sbjct: 332 AEAREQILKIHARKMNLADDVDLRKIALITDESSG 366
>sp|Q8U4H3|PAN_PYRFU Proteasome-activating nucleotidase OS=Pyrococcus furiosus (strain
ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=pan PE=3 SV=1
Length = 396
Score = 299 bits (765), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 143/312 (45%), Positives = 209/312 (66%), Gaps = 10/312 (3%)
Query: 73 LVSDKQMMQEEQPLQVARCTKIINPNS---------EDSKYVINVKQIAKFVVGLGDKVS 123
L +DK+ ++ E + +++ P + +D + ++ +FVV + +
Sbjct: 33 LEADKERLERELSRLRSEMSRLRQPPAFAGSVIEVLDDDRAIVQNYNGPRFVVRIAPWID 92
Query: 124 PTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREV 183
+ + G RV +D+ I LP DP+V V E+P+VTYND+GG K+Q++++RE
Sbjct: 93 KSKLRPGTRVALDQRTMAIIEILPASKDPAVLGFEVVERPNVTYNDIGGLKKQLQELREA 152
Query: 184 VELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYV 243
+ELP+ HPE F ++GIDPPKGVL YGPPG GKTL+A+A+A+ +A FIRV+GSELV+KY+
Sbjct: 153 IELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKAIAHEVNATFIRVVGSELVRKYI 212
Query: 244 GEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFD 303
GEGAR+V ELF++A+ K I+F DE+DAIG R D+ GG+ EV RT+++++ ++DGFD
Sbjct: 213 GEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRLDETTGGEREVNRTLMQLLAEMDGFD 272
Query: 304 ARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRF 363
RGN+KV+ ATNRPD LDPALLRPGR DR +E LPD E R +I K+HTR M R +
Sbjct: 273 PRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKL-RGVDL 331
Query: 364 ELLSRLCPNSTG 375
L++ L ++G
Sbjct: 332 RLIAELTEGASG 343
>sp|Q8SQK0|PRS8_ENCCU 26S protease regulatory subunit 8 homolog OS=Encephalitozoon
cuniculi (strain GB-M1) GN=RPT6 PE=1 SV=1
Length = 453
Score = 296 bits (759), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 144/256 (56%), Positives = 187/256 (73%)
Query: 112 AKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVG 171
K++V + V+ +++ G+RV + + Y + LP K+DP V++M VE+ PD TY +G
Sbjct: 140 GKYLVKVEPGVNYDELKAGVRVALRSDSYDVHRILPTKVDPLVSLMMVEKVPDSTYQMIG 199
Query: 172 GCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFI 231
G EQI+++REV+ELP+ HPE F LGI PKGVL YGPPGTGKTLLARAVA+ T FI
Sbjct: 200 GLDEQIKEIREVIELPIKHPELFENLGIAQPKGVLLYGPPGTGKTLLARAVAHHTQCKFI 259
Query: 232 RVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRT 291
RV GSELVQKY+GEG+R+VRELF MAR I+F DE+D+IG R D G D+EVQRT
Sbjct: 260 RVSGSELVQKYIGEGSRLVRELFIMAREHAPSIIFMDEIDSIGSTRGDSNKGSDSEVQRT 319
Query: 292 MLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIH 351
MLE++NQLDGF++ NIKV+MATNR D LDPALLR GR+DRK+EF P+ +R +I KIH
Sbjct: 320 MLELLNQLDGFESHNNIKVIMATNRIDILDPALLRTGRIDRKIEFPPPNESARLEILKIH 379
Query: 352 TRTMNCERDIRFELLS 367
+R MN + I E ++
Sbjct: 380 SRKMNLTKGIDLETIA 395
>sp|Q8TX03|PAN_METKA Proteasome-activating nucleotidase OS=Methanopyrus kandleri (strain
AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=pan PE=3
SV=1
Length = 436
Score = 295 bits (756), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 148/303 (48%), Positives = 201/303 (66%), Gaps = 5/303 (1%)
Query: 73 LVSDKQMMQEEQPLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMR 132
L SD Q M++ PL V +I++ D + ++ KFV + V ++E G
Sbjct: 89 LRSDLQRMKK-PPLIVGTVEEILD----DGRVIVKSSTGPKFVSNVSPTVDRNELEPGAN 143
Query: 133 VGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPE 192
V +++ + LP + D V M V+E PDV+Y+D+GG EQI ++REVVE P+ PE
Sbjct: 144 VALNQQSMAVVDVLPSEKDSRVLAMEVDESPDVSYDDIGGLDEQIREIREVVEKPLKEPE 203
Query: 193 KFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRE 252
F K+G++PPKGVL YGPPGTGKTLLA+AVAN DA FIR+ ELVQK++GEGAR+VRE
Sbjct: 204 LFEKVGVEPPKGVLLYGPPGTGKTLLAKAVANHADATFIRLAAPELVQKFIGEGARLVRE 263
Query: 253 LFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLM 312
LF++AR K I+F DE+DAIG R D GD EVQRT+ +++ ++DGFD +IKV+
Sbjct: 264 LFELAREKAPSIIFIDEIDAIGARRMRDATSGDREVQRTLTQLLAEMDGFDPLDDIKVIA 323
Query: 313 ATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPN 372
ATNR D LDPALLRPGR DR ++ LPD E R +IFKIHTR MN D+ + L+++
Sbjct: 324 ATNRKDILDPALLRPGRFDRHIKIPLPDEEGRYEIFKIHTRDMNLAEDVDLQKLAKITEG 383
Query: 373 STG 375
++G
Sbjct: 384 ASG 386
>sp|C5A6P8|PAN_THEGJ Proteasome-activating nucleotidase OS=Thermococcus gammatolerans
(strain DSM 15229 / JCM 11827 / EJ3) GN=pan PE=3 SV=1
Length = 397
Score = 294 bits (752), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 139/276 (50%), Positives = 193/276 (69%), Gaps = 1/276 (0%)
Query: 100 EDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTV 159
+D + ++ +FVV + + ++ G RV +D+ I LP + DPSV V
Sbjct: 70 DDDRAIVQNYNGPRFVVRIAPWIERDKLKPGSRVALDQRTMAIVELLPTEKDPSVLGFEV 129
Query: 160 EEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLA 219
EKP VTY D+GG + Q+ ++RE VELP+ HPE F K+GI+PPKGVL YGPPG GKTL+A
Sbjct: 130 IEKPRVTYQDIGGLERQLAELREAVELPLKHPELFEKVGIEPPKGVLLYGPPGCGKTLMA 189
Query: 220 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFD 279
+AVAN +A FIRV+GSELV+K++GEGAR+V ELF+MA+ K I+F DE+DAIG R D
Sbjct: 190 KAVANHVNATFIRVVGSELVRKFIGEGARLVHELFEMAKEKAPTIIFIDEIDAIGAKRMD 249
Query: 280 DGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLP 339
+ GG+ EV RT+++++ ++DGFD RGN+KV+ ATNRPD LDPALLRPGR DR +E LP
Sbjct: 250 ETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLP 309
Query: 340 DLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
D R +I K+HTR MN R++ +++ + ++G
Sbjct: 310 DFRGRLEILKVHTRKMNL-RNVDLSIIADITEGASG 344
>sp|Q9V287|PAN_PYRAB Proteasome-activating nucleotidase OS=Pyrococcus abyssi (strain GE5
/ Orsay) GN=pan PE=3 SV=2
Length = 396
Score = 293 bits (751), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 140/312 (44%), Positives = 209/312 (66%), Gaps = 10/312 (3%)
Query: 73 LVSDKQMMQEEQPLQVARCTKIINPNS---------EDSKYVINVKQIAKFVVGLGDKVS 123
L +DK+ ++ E + +++ P + +D + ++ +FVV + +
Sbjct: 33 LEADKERLERELSRLRSEMSRLRQPPAFAGTVIEVLDDDRAIVQNYNGPRFVVRIAPWIE 92
Query: 124 PTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREV 183
+ G RV +D+ I LP DP+V V E+P+VTYND+GG K+Q++++RE
Sbjct: 93 RDKLRPGARVALDQRTMAIIELLPSSKDPTVLGFEVIERPNVTYNDIGGLKKQLQELREA 152
Query: 184 VELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYV 243
+ELP+ HPE F ++GIDPPKGVL YGPPG GKTL+A+A+A+ +A FIRV+GSELV+KY+
Sbjct: 153 IELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKALAHEVNATFIRVVGSELVRKYI 212
Query: 244 GEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFD 303
GEGAR+V ELF++A+ K I+F DE+DAIG R D+ GG+ EV RT+++++ ++DGFD
Sbjct: 213 GEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFD 272
Query: 304 ARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRF 363
RGN+KV+ ATNRPD LDPALLRPGR DR +E LPD E R +I K+HTR M +++
Sbjct: 273 PRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKL-KNVDL 331
Query: 364 ELLSRLCPNSTG 375
+++ + ++G
Sbjct: 332 RVIAEITEGASG 343
>sp|Q5JHS5|PAN_PYRKO Proteasome-activating nucleotidase OS=Pyrococcus kodakaraensis
(strain ATCC BAA-918 / JCM 12380 / KOD1) GN=pan PE=3
SV=1
Length = 397
Score = 293 bits (750), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 135/276 (48%), Positives = 196/276 (71%), Gaps = 1/276 (0%)
Query: 100 EDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTV 159
+D + ++ +FVV + + ++ G RV +D+ I LP + DPSV V
Sbjct: 70 DDERAIVQNYNGPRFVVRIAPWIERDKLKPGARVALDQRTMAIVELLPSEKDPSVLGFEV 129
Query: 160 EEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLA 219
E+P VTYND+GG ++Q++++RE +ELP+ HPE F ++GI+PPKGVL YGPPG GKTL+A
Sbjct: 130 IERPKVTYNDIGGLEKQLQELREAIELPLKHPELFEQVGIEPPKGVLLYGPPGCGKTLMA 189
Query: 220 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFD 279
+AVAN +A FIRV+GSELV+K++GEGAR+V ELF++A+ K I+F DE+DAIG R D
Sbjct: 190 KAVANHVNATFIRVVGSELVRKFIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMD 249
Query: 280 DGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLP 339
+ GG+ EV RT+++++ ++DGFD RGN+KV+ ATNRPD LDPALLRPGR DR +E LP
Sbjct: 250 ETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLP 309
Query: 340 DLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
D + R +I K+HTR MN + + +++ + ++G
Sbjct: 310 DYQGRLEILKVHTRKMNL-KGVDLRVIAEITEGASG 344
>sp|O26824|PAN_METTH Proteasome-activating nucleotidase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=pan PE=3 SV=1
Length = 410
Score = 293 bits (749), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 136/291 (46%), Positives = 198/291 (68%), Gaps = 4/291 (1%)
Query: 85 PLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQI 144
PL +A T++++ D + + FV+ + +E G RV +++ + I
Sbjct: 72 PLVIATVTEVLD----DHRVAVKSTTGPHFVINYSRFIDRKQLEPGARVALNQQTFSIVD 127
Query: 145 PLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKG 204
LP + DP VT M VEEKPDV+Y +GG +EQ+ +++E VELP+ PE F K+GI+PPKG
Sbjct: 128 VLPSEKDPVVTGMEVEEKPDVSYEQIGGLEEQVREVKETVELPLKKPELFEKIGIEPPKG 187
Query: 205 VLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACI 264
VL YGPPGTGKTLLA+AVA+ T+A FI+++ SE V+KY+GEGAR+VR +F++A+ K I
Sbjct: 188 VLLYGPPGTGKTLLAKAVAHETNATFIKIVASEFVRKYIGEGARLVRGVFELAKEKSPSI 247
Query: 265 VFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPAL 324
+F DE+DA+ R GD EVQRT+++++ +LDGF++RGN+ ++ ATNRPD LDPAL
Sbjct: 248 IFIDEIDAVAAKRLKSSTSGDREVQRTLMQLLAELDGFESRGNVGIVAATNRPDILDPAL 307
Query: 325 LRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
LRPGR DR +E LP+ + R +I KIHT M ++ ELL+R+ ++G
Sbjct: 308 LRPGRFDRFIEVPLPNEDGRREILKIHTSGMALAEEVDIELLARITDGASG 358
>sp|P54778|PRS6B_SOLTU 26S protease regulatory subunit 6B homolog OS=Solanum tuberosum
PE=2 SV=1
Length = 413
Score = 291 bits (745), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 145/318 (45%), Positives = 211/318 (66%), Gaps = 17/318 (5%)
Query: 85 PLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQI 144
PL + + ++I+ N+ ++ + + V + ++ ++ VG+DR+ +
Sbjct: 81 PLVIGQFMEMIDQNNA----IVGSTTGSNYYVRILSTINRELLKPSASVGLDRHSNALVD 136
Query: 145 PLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKG 204
LPP+ D S+++++ EKPDVTYND+GGC Q +++RE VELP+ H E + ++GIDPP+G
Sbjct: 137 VLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRG 196
Query: 205 VLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACI 264
VL YGPPGTGKT+LA+AVA+ T A FIRV+GSE VQKY+GEG RMVR++F++A+ I
Sbjct: 197 VLLYGPPGTGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAI 256
Query: 265 VFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPAL 324
+F DEVDAI ARFD G D EVQR ++E++NQ+DGFD N+KV+MATNR DTLDPAL
Sbjct: 257 IFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPAL 316
Query: 325 LRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFE-LLSR-----------LCPN 372
LRPGRLDRK+EF LPD + +F++ T MN ++ E +SR +C
Sbjct: 317 LRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDLEDYVSRPDKISAAEITAIC-Q 375
Query: 373 STGKHSPFRSCFMVNPHD 390
G H+ ++ +++ P D
Sbjct: 376 EAGMHAVRKNRYVILPKD 393
>sp|O57940|PAN_PYRHO Proteasome-activating nucleotidase OS=Pyrococcus horikoshii (strain
ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=pan PE=3 SV=1
Length = 399
Score = 290 bits (743), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 133/263 (50%), Positives = 188/263 (71%), Gaps = 1/263 (0%)
Query: 113 KFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGG 172
+FVV + + + G RV +D+ + LP DP+V V E+P+VTYND+GG
Sbjct: 85 RFVVRIAPWIDRKKLRPGTRVALDQRTMAVVEILPTSKDPTVLGFEVIERPNVTYNDIGG 144
Query: 173 CKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIR 232
K+Q++++RE +ELP+ HPE F ++GIDPPKGVL YGPPG GKTL+A+A+A+ +A FIR
Sbjct: 145 LKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKALAHEVNATFIR 204
Query: 233 VIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTM 292
V+GSELV+KY+GEGAR+V ELF++A+ K I+F DE+DAIG R D+ GG+ EV RT+
Sbjct: 205 VVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTL 264
Query: 293 LEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHT 352
++++ ++DGFD RGN+KV+ ATNRPD LDPALLRPGR DR +E LPD E R +I K+HT
Sbjct: 265 MQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHT 324
Query: 353 RTMNCERDIRFELLSRLCPNSTG 375
R M + + ++ + ++G
Sbjct: 325 RRMKL-KGVDLRAIAEMTEGASG 346
>sp|P85200|PRS6B_HELAN 26S protease regulatory subunit 6B homolog OS=Helianthus annuus
PE=1 SV=1
Length = 414
Score = 290 bits (742), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 144/318 (45%), Positives = 209/318 (65%), Gaps = 17/318 (5%)
Query: 85 PLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQI 144
PL + + ++I+ N+ ++ + + V + ++ ++ V + R+ +
Sbjct: 82 PLVIGQFMEMIDQNNG----IVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVD 137
Query: 145 PLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKG 204
LPP+ D S+++++ EKPDVTYND+GGC Q +++RE VELP+ H E + ++GIDPP+G
Sbjct: 138 VLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRG 197
Query: 205 VLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACI 264
VL YGPPGTGKT+LA+AVAN T A FIRV+GSE VQKY+GEG RMVR++F++A+ I
Sbjct: 198 VLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAI 257
Query: 265 VFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPAL 324
+F DEVDAI ARFD G D EVQR ++E++NQ+DGFD N+KV+MATNR DTLDPAL
Sbjct: 258 IFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPAL 317
Query: 325 LRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFE-LLSR-----------LCPN 372
LRPGRLDRK+EF LPD + +F++ T MN ++ E +SR +C
Sbjct: 318 LRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAAEITAIC-Q 376
Query: 373 STGKHSPFRSCFMVNPHD 390
G H+ ++ +++ P D
Sbjct: 377 EAGMHAVRKNRYVILPKD 394
>sp|Q9SEI4|PRS6B_ARATH 26S protease regulatory subunit 6B homolog OS=Arabidopsis thaliana
GN=RPT3 PE=1 SV=1
Length = 408
Score = 289 bits (739), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 138/270 (51%), Positives = 189/270 (70%), Gaps = 13/270 (4%)
Query: 133 VGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPE 192
V + R+ + LPP+ D S+++++ EKPDV+YND+GGC Q +++RE VELP+ H E
Sbjct: 120 VALHRHSNALVDVLPPEADSSISLLSQSEKPDVSYNDIGGCDIQKQEIREAVELPLTHHE 179
Query: 193 KFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRE 252
+ ++GIDPP+GVL YGPPGTGKT+LA+AVAN T A FIRV+GSE VQKY+GEG RMVR+
Sbjct: 180 LYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRD 239
Query: 253 LFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLM 312
+F++A+ I+F DEVDAI ARFD G D EVQR ++E++NQ+DGFD N+KV+M
Sbjct: 240 VFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIM 299
Query: 313 ATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFE-LLSR--- 368
ATNR DTLDPALLRPGRLDRK+EF LPD + +F++ T MN ++ E +SR
Sbjct: 300 ATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTSKMNLSDEVDLEDYVSRPDK 359
Query: 369 --------LCPNSTGKHSPFRSCFMVNPHD 390
+C G H+ ++ +++ P D
Sbjct: 360 ISAAEIAAIC-QEAGMHAVRKNRYVILPKD 388
>sp|O23894|PRS6A_BRACM 26S protease regulatory subunit 6A homolog OS=Brassica campestris
GN=TBP1 PE=2 SV=1
Length = 424
Score = 289 bits (739), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 140/263 (53%), Positives = 186/263 (70%), Gaps = 3/263 (1%)
Query: 115 VVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCK 174
VVGL V P ++ G VGV+++ Y I LP + D V M V+EKP YND+GG +
Sbjct: 121 VVGL---VDPDSLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLE 177
Query: 175 EQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVI 234
+QI+++ E + LPM H E+F KLG+ PPKGVL YGPPGTGKTL+ARA A +T+A F+++
Sbjct: 178 KQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLA 237
Query: 235 GSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLE 294
G +LVQ ++G+GA++VR+ FQ+A+ K CI+F DE+DAIG RFD V GD EVQRTMLE
Sbjct: 238 GPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLE 297
Query: 295 IVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRT 354
++NQLDGF + IKV+ ATNR D LDPAL+R GRLDRK+EF P E+R +I +IH+R
Sbjct: 298 LLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRK 357
Query: 355 MNCERDIRFELLSRLCPNSTGKH 377
MN D+ FE L+R + G
Sbjct: 358 MNVHPDVNFEELARSTDDFNGAQ 380
>sp|Q9SEI2|PS6AA_ARATH 26S protease regulatory subunit 6A homolog A OS=Arabidopsis
thaliana GN=RPT5A PE=2 SV=1
Length = 424
Score = 289 bits (739), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 140/263 (53%), Positives = 186/263 (70%), Gaps = 3/263 (1%)
Query: 115 VVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCK 174
VVGL V P ++ G VGV+++ Y I LP + D V M V+EKP YND+GG +
Sbjct: 121 VVGL---VDPDSLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLE 177
Query: 175 EQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVI 234
+QI+++ E + LPM H E+F KLG+ PPKGVL YGPPGTGKTL+ARA A +T+A F+++
Sbjct: 178 KQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLA 237
Query: 235 GSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLE 294
G +LVQ ++G+GA++VR+ FQ+A+ K CI+F DE+DAIG RFD V GD EVQRTMLE
Sbjct: 238 GPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLE 297
Query: 295 IVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRT 354
++NQLDGF + IKV+ ATNR D LDPAL+R GRLDRK+EF P E+R +I +IH+R
Sbjct: 298 LLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRK 357
Query: 355 MNCERDIRFELLSRLCPNSTGKH 377
MN D+ FE L+R + G
Sbjct: 358 MNVHPDVNFEELARSTDDFNGAQ 380
>sp|Q58576|PAN_METJA Proteasome-activating nucleotidase OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=pan PE=1 SV=1
Length = 430
Score = 288 bits (738), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 134/275 (48%), Positives = 193/275 (70%)
Query: 101 DSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVE 160
+ K V+ F+V + V+P D+ G RV +++ + LP D M V+
Sbjct: 103 ERKVVVKSSTGPSFLVNVSHFVNPDDLAPGKRVCLNQQTLTVVDVLPENKDYRAKAMEVD 162
Query: 161 EKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLAR 220
E+P+V Y D+GG ++Q++++REVVELP+ HPE F K+GI+PPKG+L YGPPGTGKTLLA+
Sbjct: 163 ERPNVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAK 222
Query: 221 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDD 280
AVA T+A FIRV+GSELV+K++GEGA +V+++F++A+ K I+F DE+DAI R D
Sbjct: 223 AVATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAKRTDA 282
Query: 281 GVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPD 340
GGD EVQRT+++++ ++DGFDARG++K++ ATNRPD LDPA+LRPGR DR +E PD
Sbjct: 283 LTGGDREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPD 342
Query: 341 LESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
+ R +I KIHTR MN D+ E ++++ G
Sbjct: 343 EKGRLEILKIHTRKMNLAEDVNLEEIAKMTEGCVG 377
>sp|P54776|PRS6A_SOLLC 26S protease regulatory subunit 6A homolog OS=Solanum lycopersicum
GN=TBP1 PE=2 SV=1
Length = 423
Score = 288 bits (736), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 139/263 (52%), Positives = 187/263 (71%), Gaps = 3/263 (1%)
Query: 115 VVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCK 174
VVGL V P +++ G VGV+++ Y I LP + D V M V+EKP Y+D+GG +
Sbjct: 120 VVGL---VDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYHDIGGLE 176
Query: 175 EQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVI 234
+QI+++ E + LPM H E+F KLG+ PPKGVL YGPPGTGKTL+ARA A +T+A F+++
Sbjct: 177 KQIQELVEAIVLPMTHQERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLA 236
Query: 235 GSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLE 294
G +LVQ ++G+GA++VR+ FQ+A+ K CI+F DE+DAIG RFD V GD EVQRTMLE
Sbjct: 237 GPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLE 296
Query: 295 IVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRT 354
++NQLDGF + IKV+ ATNR D LDPAL+R GRLDRK+EF P E+R +I +IH+R
Sbjct: 297 LLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRK 356
Query: 355 MNCERDIRFELLSRLCPNSTGKH 377
MN D+ FE L+R + G
Sbjct: 357 MNVNPDVNFEELARSTDDFNGAQ 379
>sp|P46465|PRS6A_ORYSJ 26S protease regulatory subunit 6A homolog OS=Oryza sativa subsp.
japonica GN=TBP1 PE=2 SV=2
Length = 429
Score = 288 bits (736), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 139/263 (52%), Positives = 186/263 (70%), Gaps = 3/263 (1%)
Query: 115 VVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCK 174
V+GL V P ++ G VGV+++ Y I LP + D V M V+EKP YND+GG +
Sbjct: 126 VIGL---VDPEKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLE 182
Query: 175 EQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVI 234
+QI+++ E + LPM H ++F KLGI PPKGVL YGPPGTGKTL+ARA A +T+A F+++
Sbjct: 183 KQIQELVEAIVLPMTHKDRFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLA 242
Query: 235 GSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLE 294
G +LVQ ++G+GA++VR+ FQ+A+ K CI+F DE+DAIG RFD V GD EVQRTMLE
Sbjct: 243 GPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLE 302
Query: 295 IVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRT 354
++NQLDGF + IKV+ ATNR D LDPAL+R GRLDRK+EF P E+R +I +IH+R
Sbjct: 303 LLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPSEEARARILQIHSRK 362
Query: 355 MNCERDIRFELLSRLCPNSTGKH 377
MN D+ FE L+R + G
Sbjct: 363 MNVNPDVNFEELARSTDDFNGAQ 385
>sp|Q9MAK9|PS10B_ARATH 26S protease regulatory subunit S10B homolog B OS=Arabidopsis
thaliana GN=RPT4B PE=2 SV=1
Length = 399
Score = 288 bits (736), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 132/276 (47%), Positives = 190/276 (68%)
Query: 100 EDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTV 159
++ + ++ ++VVG KV + G RV +D I LP ++DP V M
Sbjct: 71 DNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLH 130
Query: 160 EEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLA 219
E+ +++Y+ VGG +QI ++RE +ELP+++PE F+++GI PPKGVL YGPPGTGKTLLA
Sbjct: 131 EDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLA 190
Query: 220 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFD 279
RA+A+ DA F++V+ S ++ KY+GE AR++RE+F AR + CI+F DE+DAIGG RF
Sbjct: 191 RAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFS 250
Query: 280 DGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLP 339
+G D E+QRT++E++NQLDGFD G +K++MATNRPD LDPALLRPGRLDRK+E LP
Sbjct: 251 EGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLP 310
Query: 340 DLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
+ +SR +I KIH + +I +E + +L G
Sbjct: 311 NEQSRMEILKIHASGIAKHGEIDYEAIVKLGEGFNG 346
>sp|B6YXR2|PAN_THEON Proteasome-activating nucleotidase OS=Thermococcus onnurineus
(strain NA1) GN=pan PE=3 SV=1
Length = 398
Score = 287 bits (735), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 130/263 (49%), Positives = 191/263 (72%), Gaps = 1/263 (0%)
Query: 113 KFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGG 172
+FVV + + +++ G RV +D+ I LP + DPSV V E+P V+YND+GG
Sbjct: 84 RFVVRIAPWIERENLKPGARVALDQRTMAIVELLPSEKDPSVLGFEVIERPTVSYNDIGG 143
Query: 173 CKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIR 232
+Q++++RE +ELP+ HPE F K+GI+PPKGVL YGPPG GKTL+A+A+A+ +A FIR
Sbjct: 144 LDKQLQELREAIELPLKHPELFEKVGIEPPKGVLLYGPPGCGKTLMAKALAHEVNATFIR 203
Query: 233 VIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTM 292
V+GSELV+K++GEGAR+V ELF++A+ K I+F DE+DAIG R D+ GG+ EV RT+
Sbjct: 204 VVGSELVRKFIGEGARLVHELFELAKEKAPAIIFIDEIDAIGAKRMDETTGGEREVNRTL 263
Query: 293 LEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHT 352
++++ ++DGFD GN+K++ ATNRPD LDPALLRPGR DR +E LP+ +SR +I KIHT
Sbjct: 264 MQLLAEMDGFDPSGNVKIIAATNRPDILDPALLRPGRFDRLIEVPLPNFKSRLEILKIHT 323
Query: 353 RTMNCERDIRFELLSRLCPNSTG 375
+ MN + + +++ + ++G
Sbjct: 324 KRMNL-KGVDLRIIAEMTEGASG 345
>sp|Q9SEI3|PS10A_ARATH 26S protease regulatory subunit 10B homolog A OS=Arabidopsis
thaliana GN=RPT4A PE=2 SV=1
Length = 399
Score = 287 bits (734), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 132/276 (47%), Positives = 189/276 (68%)
Query: 100 EDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTV 159
++ + ++ ++VVG KV + G RV +D I LP ++DP V M
Sbjct: 71 DNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLH 130
Query: 160 EEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLA 219
E+ +++Y+ VGG +QI ++RE +ELP+++PE F+++GI PPKGVL YGPPGTGKTLLA
Sbjct: 131 EDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLA 190
Query: 220 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFD 279
RA+A+ DA F++V+ S ++ KY+GE AR++RE+F AR + CI+F DE+DAIGG RF
Sbjct: 191 RAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFS 250
Query: 280 DGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLP 339
+G D E+QRT++E++NQLDGFD G +K++MATNRPD LDPALLRPGRLDRK+E LP
Sbjct: 251 EGTSADREIQRTLMELLNQLDGFDNLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLP 310
Query: 340 DLESRTQIFKIHTRTMNCERDIRFELLSRLCPNSTG 375
+ +SR I KIH + +I +E + +L G
Sbjct: 311 NEQSRMDILKIHAAGIAKHGEIDYEAIVKLAEGFNG 346
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.138 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 166,052,795
Number of Sequences: 539616
Number of extensions: 7373477
Number of successful extensions: 28651
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1302
Number of HSP's successfully gapped in prelim test: 1168
Number of HSP's that attempted gapping in prelim test: 26091
Number of HSP's gapped (non-prelim): 2929
length of query: 420
length of database: 191,569,459
effective HSP length: 120
effective length of query: 300
effective length of database: 126,815,539
effective search space: 38044661700
effective search space used: 38044661700
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)