Query 014714
Match_columns 420
No_of_seqs 288 out of 1433
Neff 6.9
Searched_HMMs 13730
Date Mon Mar 25 16:31:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014714.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/014714hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1fi4a1 d.14.1.5 (A:3-190) Mev 100.0 1.8E-52 1.3E-56 381.6 17.7 188 7-198 1-188 (188)
2 d1fi4a2 d.58.26.2 (A:191-393) 100.0 1.2E-44 9.1E-49 330.3 19.1 202 199-416 1-203 (203)
3 d1h72c1 d.14.1.5 (C:5-167) Hom 99.9 2.7E-23 1.9E-27 184.9 15.5 139 8-176 1-150 (163)
4 d1ueka1 d.14.1.5 (A:1-148) 4-( 99.7 4.8E-16 3.5E-20 135.2 14.9 139 9-179 2-140 (148)
5 d1oj4a1 d.14.1.5 (A:1-163) 4-( 99.7 5.8E-16 4.2E-20 137.0 14.7 151 9-179 4-156 (163)
6 d1kkha1 d.14.1.5 (A:1-180) Mev 99.5 2.7E-13 1.9E-17 120.2 16.3 144 9-178 5-175 (180)
7 d1h72c2 d.58.26.1 (C:168-300) 99.4 2.6E-13 1.9E-17 115.7 9.8 118 199-337 2-119 (133)
8 d1k47a1 d.14.1.5 (A:1-194) Pho 99.4 1.8E-12 1.3E-16 115.8 12.9 144 9-176 1-163 (194)
9 d1s4ea1 d.14.1.5 (A:5-180) Gal 99.3 1.7E-12 1.2E-16 114.9 9.1 134 11-172 1-156 (176)
10 d1piea1 d.14.1.5 (A:9-213) Gal 99.2 1.4E-10 1E-14 105.1 14.6 137 11-172 22-184 (205)
11 d1kvka1 d.14.1.5 (A:1-225) Mev 99.1 6.7E-10 4.9E-14 100.9 14.4 70 109-178 126-219 (225)
12 d1wuua1 d.14.1.5 (A:2-216) Gal 99.0 4.1E-09 3E-13 95.5 17.7 138 10-171 29-193 (215)
13 d1ueka2 d.58.26.5 (A:149-268) 98.2 4.5E-07 3.3E-11 74.5 4.7 109 198-336 2-110 (120)
14 d1wuua2 d.58.26.7 (A:217-392) 97.8 0.00011 8.3E-09 64.0 12.7 87 239-337 69-157 (176)
15 d1piea2 d.58.26.7 (A:214-396) 97.6 9.3E-05 6.8E-09 65.0 9.1 88 239-338 74-163 (183)
16 d1s4ea2 d.58.26.7 (A:181-351) 97.6 7.8E-05 5.7E-09 64.8 8.5 88 239-339 65-154 (171)
17 d1k47a2 d.58.26.4 (A:195-329) 96.9 0.0035 2.5E-07 51.6 10.6 106 215-334 17-124 (135)
18 d1kkha2 d.58.26.3 (A:181-317) 96.7 0.014 1.1E-06 48.1 12.9 75 245-334 49-125 (137)
19 d1oj4a2 d.58.26.5 (A:164-283) 96.4 0.00068 5E-08 55.1 2.9 55 266-334 46-100 (120)
20 d1kvka2 d.58.26.3 (A:226-394) 96.3 0.019 1.4E-06 48.9 11.9 71 251-336 63-135 (169)
21 d1vola2 a.74.1.2 (A:208-316) T 35.0 16 0.0012 27.3 3.8 32 128-159 42-73 (109)
22 d1aisb2 a.74.1.2 (B:1206-1300) 26.7 34 0.0025 24.5 4.4 30 129-158 42-71 (95)
No 1
>d1fi4a1 d.14.1.5 (A:3-190) Mevalonate 5-diphosphate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=1.8e-52 Score=381.56 Aligned_cols=188 Identities=52% Similarity=0.868 Sum_probs=170.6
Q ss_pred eeEEEEEecceeEEEeeeccccCCCCCCCCCeeEeeeCCCCceeEEEEEEcCCCCcceEEEcCccccCCcchHHHHHHHH
Q 014714 7 VLMVTAQTPTNIAVIKYWGKRDETLILPVNDSISVTLDPDHLCTTTTVAVSPSFDQDRMWLNGKEISLGGGRYQNCLKEI 86 (420)
Q Consensus 7 ~~~~~~~Ap~nIa~ikywGkrd~~~~lP~~dSisvtL~~~~L~~~t~v~~~~~~~~d~i~lnG~~~~~~~~r~~~~l~~~ 86 (420)
|+++||+||+||||||||||||+.++||.|+|||+||++++++|+|+|+.++++++|++++||++.+...+|+++|++.+
T Consensus 1 ~~~~t~~apsNIALiKYWGK~d~~~~lP~n~SiS~TL~~~~~~T~t~v~~~~~~~~d~~~lnG~~~~~~~~~~~~~~~~l 80 (188)
T d1fi4a1 1 VYTASVTAPVNIATLKYWGKRDTKLNLPTNSSISVTLSQDDLRTLTSAATAPEFERDTLWLNGEPHSIDNERTQNCLRDL 80 (188)
T ss_dssp CEEEEEEECCEEEEECCCCEEETTTTEESSCEEEEEBCTTTSCEEEEEEECTTCCSCBCTTTCCBSSSSSSSHHHHHHHH
T ss_pred CeEEEEEccCcEEEEEeccccCcccCCCCCCeEEEEecCCCcEEEEEEEeCCCCcccceeECCeecccchHHHHHHHHHH
Confidence 57899999999999999999999999999999999999989999999999998889999999998877788999999988
Q ss_pred HHHccccccccccccccccccccccEEEEEecCCCCccccccchHHHHHHHHHHHHHhCCCCCHHHHHHHHHhccCcccc
Q 014714 87 RSRACDVEDTEKGIKIEKKDWQKLHLHIASFNNFPTAAGLASSAAGFACLVFSLAKLMNLKENQSQLSAIARQGSGSACR 166 (420)
Q Consensus 87 r~~~~~~~~~~~~~~~~~~~~~~~~v~I~s~nniP~aaGLGSSAA~~aA~v~Al~~l~~l~ls~~eL~~iAr~gsGsa~~ 166 (420)
|++.+..+..... .|.+...+++|+++|+||+++|||||||++||++.|++++++++++.++++.+||+|||||||
T Consensus 81 ~~~~~~~~~~~~~----~p~~~~~~~~I~S~N~FP~aaGLASSAsg~aAl~~al~~~~~~~~~~~~~S~lARlGSGSAcR 156 (188)
T d1fi4a1 81 RQLRKEMESKDAS----LPTLSQWKLHIVSENNFPTAAGLASSAAGFAALVSAIAKLYQLPQSTSEISRIARKGSGSACR 156 (188)
T ss_dssp HHHHHHHHTTCTT----SCCGGGSCEEEEEEECCCTTSCCCHHHHHHHHHHHHHHHHTTCCSCHHHHHHHHHHHHGGGGG
T ss_pred HHHHHHHhccccc----CcccccceEEEEecCCCcchhhHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhhccchhh
Confidence 8775543221111 133456789999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCeEEEecccCCCCCCceEEEccCCCCCC
Q 014714 167 SLFGGFVKWILGKEGNGSDSLAVQLVDEEHWN 198 (420)
Q Consensus 167 sl~GG~V~~~~g~~~~g~ds~a~~i~~~~~wp 198 (420)
|+|||||.|..|...||.|++++++.++.|||
T Consensus 157 Si~Gg~v~W~~g~~~dg~d~~a~~~~~~~hWp 188 (188)
T d1fi4a1 157 SLFGGYVAWEMGKAEDGHDSMAVQIADSSDWP 188 (188)
T ss_dssp GGSSSEEEEECCSCTTCTTCEEEEEECGGGST
T ss_pred hhcCCeeEeccCCCCCCCceeEEECCCccCCC
Confidence 99999999999988899999999999999998
No 2
>d1fi4a2 d.58.26.2 (A:191-393) Mevalonate 5-diphosphate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=1.2e-44 Score=330.32 Aligned_cols=202 Identities=40% Similarity=0.557 Sum_probs=170.9
Q ss_pred CceEEEEEECCCCCccCchHHhhhhhccchhHHHHHhhhchHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhhhccccCCC
Q 014714 199 DLVIIIAVVSSRQKETSSTTGMRESVETSLLLQHRAKEVVPKRIVQMEEAIQNHDFSSFAQLTCADSNQFHAVCLDTSPP 278 (420)
Q Consensus 199 ~l~~vvlvv~~~~k~vsst~~m~~~~~ts~~~~~~~~~~~~~~~~~l~~Al~~~D~~~f~~~~~~dsn~lha~~~~~~p~ 278 (420)
+|+++|+|++..+|.++||.||+.++.||++|+.|+++++++|+..|.+||+++||+.|++++|+|+|+||++|++++||
T Consensus 1 elr~~IlVvs~~~K~vsSt~GM~~tv~TSpl~~~r~~~~~p~r~~~m~~AI~~rDF~~f~eite~ds~~mHA~~l~s~Pp 80 (203)
T d1fi4a2 1 QMKACVLVVSDIKKDVSSTQGMQLTVATSELFKERIEHVVPKRFEVMRKAIVEKDFATFAKETMMDSNSFHATCLDSFPP 80 (203)
T ss_dssp TEEEEEEEECCCSCCCCHHHHHHHHHHHCSHHHHHHHTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSSSC
T ss_pred CceEEEEEecCCCCCCCcHHHHHHHHHhChhHHHHHHHHhHHHHHHHHHHHHhCCHHHHHHHHHHhHHHHHHHHhcCCCC
Confidence 57899999999999999999999999999999999998779999999999999999999999999999999999999999
Q ss_pred ccccCchHHHHHHHHHHHHHhcCCCcEEEeeCCCCceEEEeeccchHHHHHHHHHhhCCCCCCCCcCccccCccchhhhc
Q 014714 279 IFYMNDTSHRIISYVERWNRSVGSPQVAYTFDAGPNAVLIARNRKIATELLQRLLFFFPPNSETDLNSYVLGDKSILRDA 358 (420)
Q Consensus 279 ~~yl~~~s~~ii~~v~~~~~~~Ga~~~a~tsgAGPtv~~i~~~~~~~~~v~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~ 358 (420)
++||+|.+.++|++|+++|+..|...++||+|||||+++|+++++..+ ++..+++.||..++|+...... .++..
T Consensus 81 i~Ylnd~S~~ii~~V~~~r~~~g~~~v~yT~DAGPNv~ll~~~~~~~~-v~~~l~~~f~~~~~~~~~~~~~----~~~~~ 155 (203)
T d1fi4a2 81 IFYMNDTSKRIISWCHTINQFYGETIVAYTFDAGPNAVLYYLAENESK-LFAFIYKLFGSVPGWDKKFTTE----QLEAF 155 (203)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHTSCCEEEEECSSSCEEEEEEGGGHHH-HHHHHHHHHTTSTTSTTTCCHH----HHHHH
T ss_pred eEEECchHHHHHHHHHHHHHhcCCccEEEEECCCCCEEEEEccccHHH-HHHHHHHHCCCCCCcccccccc----ccccc
Confidence 999999999999999999986665569999999999999999999998 9999999999998887642111 11110
Q ss_pred cCCCcccccCCCCCcccccc-cccccCCCcceEEEeCCCCCceecCCCcccccCCCCCC
Q 014714 359 GIDGMKDIEALPLPPEINNI-SAQKYSGDVNYFICTRPGGGPVLLSDDSKALLNPKSGL 416 (420)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~t~vg~gp~~~~~~~~~l~~~~~~~ 416 (420)
... .+. ..+... .....+++|+|||||+||+||+.++ +||||++|||
T Consensus 156 ~~~----~~~----~~~~~~~~~~~~~~~v~~iI~T~vG~GP~~~~---~~L~~~~tgl 203 (203)
T d1fi4a2 156 NHQ----FES----SNFTARELDLELQKDVARVILTQVGSGPQETN---ESLIDAKTGL 203 (203)
T ss_dssp HHH----HHT----SCCCSSCCCSSGGGGEEEEEEEEBCCCCEECS---CCSSCSSSCC
T ss_pred ccc----ccc----cccccccccccccCCccEEEEcCCCCCccccc---hhccCCCCCC
Confidence 000 000 111111 1123589999999999999999985 8999998997
No 3
>d1h72c1 d.14.1.5 (C:5-167) Homoserine kinase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=99.90 E-value=2.7e-23 Score=184.85 Aligned_cols=139 Identities=19% Similarity=0.193 Sum_probs=114.9
Q ss_pred eEEEEEecceeEEEeeeccccCCCCCCCCCeeEeeeCCCCceeEEEEEEcCCCCcceEEEcCccccC--CcchHHHHHHH
Q 014714 8 LMVTAQTPTNIAVIKYWGKRDETLILPVNDSISVTLDPDHLCTTTTVAVSPSFDQDRMWLNGKEISL--GGGRYQNCLKE 85 (420)
Q Consensus 8 ~~~~~~Ap~nIa~ikywGkrd~~~~lP~~dSisvtL~~~~L~~~t~v~~~~~~~~d~i~lnG~~~~~--~~~r~~~~l~~ 85 (420)
|+++++||..+|++ .|+||+|+++|+ .+|++++|+.+++ .+.++..+++..+. +++.+..+++.
T Consensus 1 m~i~v~~Pas~aNl-----------g~GFD~lg~Al~--~~~d~v~v~~~~~-~~i~i~~~~~~i~~~~~~n~~~~~~~~ 66 (163)
T d1h72c1 1 MKVRVKAPCTSANL-----------GVGFDVFGLCLK--EPYDVIEVEAIDD-KEIIIEVDDKNIPTDPDKNVAGIVAKK 66 (163)
T ss_dssp CEEEEEEEEEEECT-----------GGGTTTEEEEEE--EEEEEEEEEEESS-SSEEEEESCTTSCCCTTTSHHHHHHHH
T ss_pred CEEEEEEeccHHhc-----------cccHhHhhhhhc--CCccEEEEEECCC-CeEEEEecCcccCCchhhhhHHHHHHH
Confidence 56899999999997 699999999998 4799999998764 24556677765543 24456677777
Q ss_pred HHHHccccccccccccccccccccccEEEEEecCCCCccccccchHHHHHHHHHHHHHhCCCCCHHHHHHHHHhc-----
Q 014714 86 IRSRACDVEDTEKGIKIEKKDWQKLHLHIASFNNFPTAAGLASSAAGFACLVFSLAKLMNLKENQSQLSAIARQG----- 160 (420)
Q Consensus 86 ~r~~~~~~~~~~~~~~~~~~~~~~~~v~I~s~nniP~aaGLGSSAA~~aA~v~Al~~l~~l~ls~~eL~~iAr~g----- 160 (420)
+++..+. ..+++|+++|+||+++|||||||.++|+++|+|++++++++.+++.++|.++
T Consensus 67 ~~~~~~~----------------~~~~~i~i~~~IP~gaGLGsSSA~a~a~l~aln~l~~~~ls~~~l~~~A~~~e~~~~ 130 (163)
T d1h72c1 67 MIDDFNI----------------GKGVKITIKKGVKAGSGLGSSAASSAGTAYAINELFKLNLDKLKLVDYASYGELASS 130 (163)
T ss_dssp HHHHTTC----------------CCEEEEEEECSSCTTSSSCHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHhcCC----------------CCCEEEEEeeccccccccCccHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhc
Confidence 7777653 4589999999999999999999999999999999999999999999999765
Q ss_pred -cC---ccccccccCeEEEe
Q 014714 161 -SG---SACRSLFGGFVKWI 176 (420)
Q Consensus 161 -sG---sa~~sl~GG~V~~~ 176 (420)
+| ++++|+|||+++..
T Consensus 131 g~~~gddv~~~~~GG~~~~~ 150 (163)
T d1h72c1 131 GAKHADNVAPAIFGGFTMVT 150 (163)
T ss_dssp SSCCCTTHHHHHHCSEEEEE
T ss_pred CCCCchHhHHHhhCCEEEEe
Confidence 33 46889999998643
No 4
>d1ueka1 d.14.1.5 (A:1-148) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Thermus thermophilus [TaxId: 274]}
Probab=99.67 E-value=4.8e-16 Score=135.21 Aligned_cols=139 Identities=16% Similarity=0.093 Sum_probs=111.6
Q ss_pred EEEEEecceeEEEeeeccccCCCCCCCCCeeEeeeCCCCceeEEEEEEcCCCCcceEEEcCccccCCcchHHHHHHHHHH
Q 014714 9 MVTAQTPTNIAVIKYWGKRDETLILPVNDSISVTLDPDHLCTTTTVAVSPSFDQDRMWLNGKEISLGGGRYQNCLKEIRS 88 (420)
Q Consensus 9 ~~~~~Ap~nIa~ikywGkrd~~~~lP~~dSisvtL~~~~L~~~t~v~~~~~~~~d~i~lnG~~~~~~~~r~~~~l~~~r~ 88 (420)
+.-|.|.+|+.| +--|||+++|| ..+|+...++ |+++.+++..+ +.+.+.|.. .+++.+.++++.+++
T Consensus 2 ~~~aPAKINL~L-~V~~kr~dGyH--~l~s~~~~i~---l~D~i~i~~~~----~~~~~~~p~--~~~Nlv~ka~~~l~~ 69 (148)
T d1ueka1 2 ERLAPAKVNLGL-SVRFRREDGYH--ELHTLFAPFS---LADRLVVEPVS----SGLHFQGPY--GRENLAYRAASLYLE 69 (148)
T ss_dssp EEEEEEEEEEEE-EEEEECTTSSE--EEEEEEEEEE---EEEEEEEEEES----SCEEEESTT--GGGSHHHHHHHHHHH
T ss_pred cccccceEeeeE-eeCccCCCCcc--eeeEEEEEEE---CccccEEEccc----ccccccccc--cccchhhhhhhhhHH
Confidence 455778888887 56899999999 5889999998 99999998764 345555532 124567788888888
Q ss_pred HccccccccccccccccccccccEEEEEecCCCCccccccchHHHHHHHHHHHHHhCCCCCHHHHHHHHHhccCcccccc
Q 014714 89 RACDVEDTEKGIKIEKKDWQKLHLHIASFNNFPTAAGLASSAAGFACLVFSLAKLMNLKENQSQLSAIARQGSGSACRSL 168 (420)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~v~I~s~nniP~aaGLGSSAA~~aA~v~Al~~l~~l~ls~~eL~~iAr~gsGsa~~sl 168 (420)
.++. ..+++|+++||||+++|||||||.+||++.+++++|+.+++ +.++|++.+.+++.|+
T Consensus 70 ~~~~----------------~~~~~I~i~K~IP~~aGLGGGSsnAAa~l~~l~~~~~~~~~---l~~la~~iGsDVPffl 130 (148)
T d1ueka1 70 AAGQ----------------PGGVRILLEKRIPEGAGLGGGSSDAAQVLLALQALYPAEVD---LFALARTLGADVPFFL 130 (148)
T ss_dssp HTTC----------------CCEEEEEEECCSCSSSSSCHHHHHHHHHHHHHHHHSCSCCC---HHHHHHHHCTTHHHHH
T ss_pred hcCC----------------CceEEEEEEeeEEEeeeccCCchhhhhHHHHHHHhhhhhhH---HHHhhcccCCCchhhc
Confidence 7764 46799999999999999999999999999999999998764 6678877766788899
Q ss_pred ccCeEEEeccc
Q 014714 169 FGGFVKWILGK 179 (420)
Q Consensus 169 ~GG~V~~~~g~ 179 (420)
.||.+ +..|.
T Consensus 131 ~~~~~-~~~G~ 140 (148)
T d1ueka1 131 LGRGA-EARGV 140 (148)
T ss_dssp HCSEE-EEETT
T ss_pred cCCCE-EEEEe
Confidence 99985 44554
No 5
>d1oj4a1 d.14.1.5 (A:1-163) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Escherichia coli [TaxId: 562]}
Probab=99.66 E-value=5.8e-16 Score=136.95 Aligned_cols=151 Identities=13% Similarity=0.080 Sum_probs=115.2
Q ss_pred EEEEEecceeEEEeeeccccCCCCCCCCCeeEeeeCCCCceeEEEEEEcCCCCcceEEEcCccc--cCCcchHHHHHHHH
Q 014714 9 MVTAQTPTNIAVIKYWGKRDETLILPVNDSISVTLDPDHLCTTTTVAVSPSFDQDRMWLNGKEI--SLGGGRYQNCLKEI 86 (420)
Q Consensus 9 ~~~~~Ap~nIa~ikywGkrd~~~~lP~~dSisvtL~~~~L~~~t~v~~~~~~~~d~i~lnG~~~--~~~~~r~~~~l~~~ 86 (420)
+..+.|.+|+.| +--|||+++|| .-+|+.+.++ |+++.+++..+ +..+.+.+... ...++.+.+.+..+
T Consensus 4 ~~~apAKINL~L-~V~~kr~dgyH--~i~S~~~~i~---l~D~i~i~~~~---~~~~~~~~~~~~~~~~~n~~~k~~~~l 74 (163)
T d1oj4a1 4 QWPSPAKLNLFL-YITGQRADGYH--TLQTLFQFLD---YGDTISIELRD---DGDIRLLTPVEGVEHEDNLIVRAARLL 74 (163)
T ss_dssp EEEEEEEEEEEE-EEEEECTTSCE--EEEEEEEEEE---EEEEEEEEEES---SSCEEECSCBTTBCGGGSHHHHHHHHH
T ss_pred CCccCEeEEeeE-EeCCcCCCCcc--eEEEEEEEec---CCcEEEEEecc---ccceeEecCccCCccccchHHHHHHHH
Confidence 455677777777 55799999999 4789999998 99999999875 34455544322 22344455666666
Q ss_pred HHHccccccccccccccccccccccEEEEEecCCCCccccccchHHHHHHHHHHHHHhCCCCCHHHHHHHHHhccCcccc
Q 014714 87 RSRACDVEDTEKGIKIEKKDWQKLHLHIASFNNFPTAAGLASSAAGFACLVFSLAKLMNLKENQSQLSAIARQGSGSACR 166 (420)
Q Consensus 87 r~~~~~~~~~~~~~~~~~~~~~~~~v~I~s~nniP~aaGLGSSAA~~aA~v~Al~~l~~l~ls~~eL~~iAr~gsGsa~~ 166 (420)
++....... .....+++|+++||||+++|||||||.+||++.+++++|+++++.++|..+|.+...+++.
T Consensus 75 ~~~~~~~~~----------~~~~~~~~I~i~KnIP~gaGLGGGSsnAAa~L~~l~~~~~~~l~~~~l~~ia~~iGsDvpf 144 (163)
T d1oj4a1 75 MKTAADSGR----------LPTGSGANISIDKRLPMGGGLGGGSSNAATVLVALNHLWQCGLSMDELAEMGLTLGADVPV 144 (163)
T ss_dssp HHHHHHTTC----------SCTTCEEEEEEECCSCSSTTSCHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHGGGCTTHHH
T ss_pred HHHhhhhhh----------cccCCceEEEEEeeeeecccccCCCchHHHHHHHhhcccccCCCHHHHHHHHHHcCCcccc
Confidence 665432110 0124578999999999999999999999999999999999999999999999998888889
Q ss_pred ccccCeEEEeccc
Q 014714 167 SLFGGFVKWILGK 179 (420)
Q Consensus 167 sl~GG~V~~~~g~ 179 (420)
|+.||.. +..|.
T Consensus 145 fl~~~~a-~~~G~ 156 (163)
T d1oj4a1 145 FVRGHAA-FAEGV 156 (163)
T ss_dssp HHHCBCE-EEETT
T ss_pred cccCCCE-EEEEc
Confidence 9999975 44554
No 6
>d1kkha1 d.14.1.5 (A:1-180) Mevalonate kinase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=99.49 E-value=2.7e-13 Score=120.20 Aligned_cols=144 Identities=17% Similarity=0.202 Sum_probs=100.9
Q ss_pred EEEEEecceeEEEeeeccccCCCCCCCCCeeEeeeCCCCceeEEEEEEcCCCCcceEEEcCcc--c----------cCC-
Q 014714 9 MVTAQTPTNIAVIKYWGKRDETLILPVNDSISVTLDPDHLCTTTTVAVSPSFDQDRMWLNGKE--I----------SLG- 75 (420)
Q Consensus 9 ~~~~~Ap~nIa~ikywGkrd~~~~lP~~dSisvtL~~~~L~~~t~v~~~~~~~~d~i~lnG~~--~----------~~~- 75 (420)
++.++||..|.|+ |.+-+-+ +...|+++++ ++++++++..++ +++.++... . ...
T Consensus 5 ~~~~~aPgkv~L~---GEh~~~~---G~~~l~~aI~---~~~~v~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~ 72 (180)
T d1kkha1 5 HMIIETPSKVILF---GEHAVVY---GYRAISMAID---LTSTIEIKETQE---DEIILNLNDLNKSLGLNLNEIKNINP 72 (180)
T ss_dssp CEEEEEEEEEEEE---CTTGGGG---TCCEEEEEEE---EEEEEEEEECCS---SEEEEEETTTTEEEEEETTTGGGCCG
T ss_pred eEEEEcCEEEEEE---ccCeEEc---CCEEEEEEEe---CEEEEEEEECCC---CCcceeeecccceeeecchhccccCc
Confidence 3678999999985 6654333 4568999998 888888877642 344432211 0 000
Q ss_pred --cch---HHHHHHHHHHHccccccccccccccccccccccEEEEEecCCCCccccccchHHHHHHHHHHHHHhCCCCCH
Q 014714 76 --GGR---YQNCLKEIRSRACDVEDTEKGIKIEKKDWQKLHLHIASFNNFPTAAGLASSAAGFACLVFSLAKLMNLKENQ 150 (420)
Q Consensus 76 --~~r---~~~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~v~I~s~nniP~aaGLGSSAA~~aA~v~Al~~l~~l~ls~ 150 (420)
... +...++.+.+..+.. ...+++|.+.++||.++|||||||..+|++.+++++++++++.
T Consensus 73 ~~~~~~~~~~~~i~~~~~~~~~~--------------~~~g~~i~i~s~iP~g~GLGSSaa~~va~~~al~~~~~~~l~~ 138 (180)
T d1kkha1 73 NNFGDFKYCLCAIKNTLDYLNIE--------------PKTGFKINISSKIPISCGLGSSASITIGTIKAVSGFYNKELKD 138 (180)
T ss_dssp GGSGGGHHHHHHHHHHHHHTTCC--------------CCSCEEEEEEECSCSSSSSCHHHHHHHHHHHHHHHTTTCCCCH
T ss_pred cchhhHHHHHHHHHHHHHHhCCC--------------CCCCEEEEEeccchhhcCccccchhHHHHHHHHHHHhCcCCCH
Confidence 011 222333343443321 1357899999999999999999999999999999999999999
Q ss_pred HHHHHHHHhc--------cC-ccccccccCeEEEecc
Q 014714 151 SQLSAIARQG--------SG-SACRSLFGGFVKWILG 178 (420)
Q Consensus 151 ~eL~~iAr~g--------sG-sa~~sl~GG~V~~~~g 178 (420)
+++.++|.++ || +.+.|+|||++.++.+
T Consensus 139 ~~l~~la~~~E~~~~g~~sg~D~~~~~~Gg~i~~~~~ 175 (180)
T d1kkha1 139 DEIAKLGYMVEKEIQGKASITDTSTITYKGILEIKNN 175 (180)
T ss_dssp HHHHHHHHHHHHHHSSSCCSHHHHHHHHCSEEEESSS
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHhCCEEEEeCC
Confidence 9999999654 23 4577999999877544
No 7
>d1h72c2 d.58.26.1 (C:168-300) Homoserine kinase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=99.42 E-value=2.6e-13 Score=115.73 Aligned_cols=118 Identities=17% Similarity=0.145 Sum_probs=90.7
Q ss_pred CceEEEEEECCCCCccCchHHhhhhhccchhHHHHHhhhchHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhhhccccCCC
Q 014714 199 DLVIIIAVVSSRQKETSSTTGMRESVETSLLLQHRAKEVVPKRIVQMEEAIQNHDFSSFAQLTCADSNQFHAVCLDTSPP 278 (420)
Q Consensus 199 ~l~~vvlvv~~~~k~vsst~~m~~~~~ts~~~~~~~~~~~~~~~~~l~~Al~~~D~~~f~~~~~~dsn~lha~~~~~~p~ 278 (420)
++++++ ++|+- .+ ||..+|..+|+...+++.+.+ ..+...|+.++.++|++.+++.+++| .+|++++
T Consensus 2 ~l~~vl-~~P~~--~v-sT~~aR~~LP~~~~~~dav~n--~~~~~~lv~al~~~d~~l~~~~~~~D--~l~Ep~r----- 68 (133)
T d1h72c2 2 KLDILI-AIPNI--SI-NTKEAREILPKAVGLKDLVNN--VGKACGMVYALYNKDKSLFGRYMMSD--KVIEPVR----- 68 (133)
T ss_dssp CCCEEE-ECCSS--CC-CHHHHHHTSCSCCCHHHHHHH--HHHHHHHHHHHHTTCHHHHHHHHTTC--CSSHHHH-----
T ss_pred eeEEEE-EECCC--CC-cHHHHHHhchhhCCHHHHHHh--hhhhHHHHHHHhccCHHHHHHHHhcC--cccCcee-----
Confidence 355654 45543 45 566678888876667776766 67899999999999999999877775 7888654
Q ss_pred ccccCchHHHHHHHHHHHHHhcCCCcEEEeeCCCCceEEEeeccchHHHHHHHHHhhCC
Q 014714 279 IFYMNDTSHRIISYVERWNRSVGSPQVAYTFDAGPNAVLIARNRKIATELLQRLLFFFP 337 (420)
Q Consensus 279 ~~yl~~~s~~ii~~v~~~~~~~Ga~~~a~tsgAGPtv~~i~~~~~~~~~v~~~l~~~f~ 337 (420)
..+.|...++.+.++ .|+. ++++||||||+|+++++++..+ +.+.|+++|.
T Consensus 69 -~~l~P~~~~ik~~l~-----~ga~-~~~lSGSGPTv~al~~~~~~~~-~~~~l~~~~~ 119 (133)
T d1h72c2 69 -GKLIPNYFKIKEEVK-----DKVY-GITISGSGPSIIAFPKEEFIDE-VENILRDYYE 119 (133)
T ss_dssp -HTTSTTHHHHHHHHT-----TTEE-EEEECTTSSCEEEEECGGGHHH-HHHHHHHHCS
T ss_pred -cccCCchHHHHHHhh-----cCce-EEEEeCCCCcEEEEeChHHHHH-HHHHHHHHHh
Confidence 567888988877542 4887 7788899999999998876665 9999998874
No 8
>d1k47a1 d.14.1.5 (A:1-194) Phosphomevalonate kinase (PMK) {Streptococcus pneumoniae r6 [TaxId: 171101]}
Probab=99.37 E-value=1.8e-12 Score=115.80 Aligned_cols=144 Identities=17% Similarity=0.147 Sum_probs=102.7
Q ss_pred EEEEEecceeEEEeeeccccCCCCC-CCCCeeEeeeCCCCceeEEEEEEcCCCCcceEEEcCcccc--C----CcchHHH
Q 014714 9 MVTAQTPTNIAVIKYWGKRDETLIL-PVNDSISVTLDPDHLCTTTTVAVSPSFDQDRMWLNGKEIS--L----GGGRYQN 81 (420)
Q Consensus 9 ~~~~~Ap~nIa~ikywGkrd~~~~l-P~~dSisvtL~~~~L~~~t~v~~~~~~~~d~i~lnG~~~~--~----~~~r~~~ 81 (420)
++.++||..+-+ +|.+- .+ |+..+|++++| .|++++++.++ ..++........ . ....+..
T Consensus 1 mi~v~apGK~iL---~GE~a---Vv~~G~~ala~ai~---~~~~v~v~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~ 68 (194)
T d1k47a1 1 MIAVKTCGKLYW---AGEYA---ILEPGQLALIKDIP---IYMRAEIAFSD---SYRIYSDMFDFAVDLRPNPDYSLIQE 68 (194)
T ss_dssp CEEEEEEEEEEE---ECTTG---GGSTTCEEEEEEEE---EEEEEEEEECS---SCEEEEEC---------CCCHHHHHH
T ss_pred CeEEEeCcEEEE---EeeeE---EecCCCeEEEEEEe---ceEEEEEEECC---CceEEeeccccccccccCcchhHHHH
Confidence 367899999888 46443 34 68999999999 78888887765 344443322211 1 1223344
Q ss_pred HHHHHHHHccccccccccccccccccccccEEEEEecCCCCcc---ccccchHHHHHHHHHHHHHhCCCCCHHHHHHHHH
Q 014714 82 CLKEIRSRACDVEDTEKGIKIEKKDWQKLHLHIASFNNFPTAA---GLASSAAGFACLVFSLAKLMNLKENQSQLSAIAR 158 (420)
Q Consensus 82 ~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~v~I~s~nniP~aa---GLGSSAA~~aA~v~Al~~l~~l~ls~~eL~~iAr 158 (420)
+++.+.+...... ....+++|.+++++|.++ |||||||..+|++.|++++++++++.+++.++|.
T Consensus 69 ~~~~~~~~~~~~~------------~~~~~~~i~i~s~ip~~~~~~GLGSSAA~~va~~~al~~~~~~~ls~~~i~~lA~ 136 (194)
T d1k47a1 69 TIALMGDFLAVRG------------QNLRPFSLAIYGKMEREGKKFGLGSSGSVVVLVVKALLALYNLSVDQNLLFKLTS 136 (194)
T ss_dssp HHHHHHHHHHHTT------------CCCCCEEEEEESHHHHSTTSSCSCHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcC------------CCCCCeEEEEEccCccccCCCcccchHHHHHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence 5555544443211 123578899999999998 9999999999999999999999999999999995
Q ss_pred hc--------cC-ccccccccCeEEEe
Q 014714 159 QG--------SG-SACRSLFGGFVKWI 176 (420)
Q Consensus 159 ~g--------sG-sa~~sl~GG~V~~~ 176 (420)
.+ || +.+.|.|||++.+.
T Consensus 137 ~~e~~~~g~~SG~D~a~s~~GG~i~y~ 163 (194)
T d1k47a1 137 AVLLKRGDNGSMGDLACIAAEDLVLYQ 163 (194)
T ss_dssp HHHHHTTCCSCCHHHHHHHHTSCEEEE
T ss_pred HHHHHhccCCCccchhHHHcCCeEEEE
Confidence 43 33 45789999998765
No 9
>d1s4ea1 d.14.1.5 (A:5-180) Galactokinase {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=99.32 E-value=1.7e-12 Score=114.88 Aligned_cols=134 Identities=19% Similarity=0.198 Sum_probs=87.9
Q ss_pred EEEecceeEEEeeeccccCCCCCCCCCeeEeeeCCCCceeEEEEEEcCCCCcceEEEcC-----------ccccC-Ccch
Q 014714 11 TAQTPTNIAVIKYWGKRDETLILPVNDSISVTLDPDHLCTTTTVAVSPSFDQDRMWLNG-----------KEISL-GGGR 78 (420)
Q Consensus 11 ~~~Ap~nIa~ikywGkrd~~~~lP~~dSisvtL~~~~L~~~t~v~~~~~~~~d~i~lnG-----------~~~~~-~~~r 78 (420)
|++||..|.++ |.+-+ |+ +-..|+++++ ++++++++.++ ..++.... ..... ....
T Consensus 1 tv~aPgRi~l~---GeH~D-y~--gg~vl~~AI~---~~~~v~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (176)
T d1s4ea1 1 TVKSPGRVNLI---GEHTD-YT--YGYVMPMAID---LYTIITAEKYD---KVQLYSEHFNEEKTFTLDNLTKEGSWIDY 68 (176)
T ss_dssp CEEEEEEEESS---CCSCG-GG--TCEECEEEEE---EEEEEC----C---CBCCCBTTTTC-C---CC-CCCCSSTHHH
T ss_pred CcccCEEEEEE---ccCee-eC--CCEEEeEEee---eEEEEEEEccc---ceEEEeccCCcceeeeeccccccccchhh
Confidence 68999999996 44432 22 3458899998 77777665432 22222211 11000 0112
Q ss_pred HHHHHHHHHHHccccccccccccccccccccccEEEEEecCCCCccccccchHHHHHHHHHHHHHhCCCCCHHHHHHHHH
Q 014714 79 YQNCLKEIRSRACDVEDTEKGIKIEKKDWQKLHLHIASFNNFPTAAGLASSAAGFACLVFSLAKLMNLKENQSQLSAIAR 158 (420)
Q Consensus 79 ~~~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~v~I~s~nniP~aaGLGSSAA~~aA~v~Al~~l~~l~ls~~eL~~iAr 158 (420)
...++..+++.... ..+++|.+.++||.++|||||||..+|++.|++++++++++.+++.++|.
T Consensus 69 ~~~~~~~~~~~~~~----------------~~g~~i~i~s~iP~gsGLgSSAAl~va~~~al~~~~~~~~~~~~l~~~a~ 132 (176)
T d1s4ea1 69 VKGVLWVLIQEGYK----------------IGGLKGKITGDLPLGAGLSSSASFEVGILEVLNQLYNLNIDPLKKALLAK 132 (176)
T ss_dssp HHHHHHHHHHTTCC----------------CCCBC-CEEESSCTTSSSCHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred eehhhhhhhhhccc----------------CCCeEEEEecCcccCccccchHHHHHHHHHHHHHHhhccCCHHHHHHHHH
Confidence 33344444433221 34788888999999999999999999999999999999999999999997
Q ss_pred hcc----C------ccccccccCe
Q 014714 159 QGS----G------SACRSLFGGF 172 (420)
Q Consensus 159 ~gs----G------sa~~sl~GG~ 172 (420)
+.+ | +-+.|+|||+
T Consensus 133 ~~E~~~~g~~~G~~Dq~~~~~gg~ 156 (176)
T d1s4ea1 133 KAENEFVGVPCGILDQFAVVFGKK 156 (176)
T ss_dssp HHHHHTSCCCCCSHHHHHHHHCCT
T ss_pred HHHHHhcCCCcchHHHHHHHhcCC
Confidence 653 3 2356889996
No 10
>d1piea1 d.14.1.5 (A:9-213) Galactokinase {Lactococcus lactis [TaxId: 1358]}
Probab=99.18 E-value=1.4e-10 Score=105.15 Aligned_cols=137 Identities=17% Similarity=0.200 Sum_probs=94.1
Q ss_pred EEEecceeEEEeeeccccCCCCCCCCCeeEeeeCCCCceeEEEEEEcCCCCcceEEE---c--------CccccC-----
Q 014714 11 TAQTPTNIAVIKYWGKRDETLILPVNDSISVTLDPDHLCTTTTVAVSPSFDQDRMWL---N--------GKEISL----- 74 (420)
Q Consensus 11 ~~~Ap~nIa~ikywGkrd~~~~lP~~dSisvtL~~~~L~~~t~v~~~~~~~~d~i~l---n--------G~~~~~----- 74 (420)
.++||..|.++ |.+-+-+. -..|.++++ ++++++++..++ ...++.- + -.+...
T Consensus 22 ~~~aPgRv~L~---GeH~Dy~g---g~vl~~AI~---~~~~v~~~~~~d-~~i~i~s~~~~~~~~~~~~~~~~~~~~~~~ 91 (205)
T d1piea1 22 YFFSPGRINLI---GEHTDYNG---GYVFPASIT---IGTTGLARLRED-KKVKLYSENFPKLGVIEFDLDEVEKKDGEL 91 (205)
T ss_dssp EEEEEEEEEEE---CCSCTTTT---CEEEEEEEE---EEEEEEEEECSS-SEEEEEETTCGGGCCEEEETTCTTSCCTTC
T ss_pred EEEcceEEEEe---cCCeeECC---CEeeccccc---ceEEEEEecCCC-CeeeeecCCCCccceeeccccccccccccc
Confidence 56899999997 44433222 337889998 788888877643 1222221 1 111100
Q ss_pred CcchHHHHHHHHHHHccccccccccccccccccccccEEEEEecCCCCccccccchHHHHHHHHHHHHHhCCCCCHHHHH
Q 014714 75 GGGRYQNCLKEIRSRACDVEDTEKGIKIEKKDWQKLHLHIASFNNFPTAAGLASSAAGFACLVFSLAKLMNLKENQSQLS 154 (420)
Q Consensus 75 ~~~r~~~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~v~I~s~nniP~aaGLGSSAA~~aA~v~Al~~l~~l~ls~~eL~ 154 (420)
....+..++..+++.... ...++.|.+..+||.++|||||||..+|++.|++++++++++..++.
T Consensus 92 ~~~~~~~~i~~l~~~~~~---------------~~~G~~i~i~s~iP~gsGLgSSAAl~va~~~al~~~~~~~~~~~~ia 156 (205)
T d1piea1 92 WSNYVKGMIVMLKGAGYE---------------IDKGFELLIKGEIPTASGLSSSASLELLVGVVLDDLFNLNVPRLELV 156 (205)
T ss_dssp THHHHHHHHHHHHHTTCC---------------CCSCEEEEEEECSCTTSSSCHHHHHHHHHHHHHHHHTTCCCCHHHHH
T ss_pred hhHHHHHHHHHHHHhCCc---------------cccCeEEEEecCCccccccCccHHHHHHHHHHHHHHhCCCCCHHHHH
Confidence 112344566555544322 13589999999999999999999999999999999999999999999
Q ss_pred HHHHhcc----C------ccccccccCe
Q 014714 155 AIARQGS----G------SACRSLFGGF 172 (420)
Q Consensus 155 ~iAr~gs----G------sa~~sl~GG~ 172 (420)
++|.+.+ | +-+.|.+||+
T Consensus 157 ~~a~~~E~~~~g~~~G~~Dq~as~~g~~ 184 (205)
T d1piea1 157 QLGQKTENDYIGVNSGILDQFAIGFGEV 184 (205)
T ss_dssp HHHHHHHHHTTCCCCCSHHHHHHHHCBT
T ss_pred HHHHHHHHhhcCCCCcHHHHHHHHhcCC
Confidence 9996653 3 2355889984
No 11
>d1kvka1 d.14.1.5 (A:1-225) Mevalonate kinase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.08 E-value=6.7e-10 Score=100.93 Aligned_cols=70 Identities=29% Similarity=0.391 Sum_probs=57.7
Q ss_pred cccEEEEEecCCCCccccccchHHHHHHHHHHHHHhCCCCC---------------HHHHHHHHHh--------ccC-cc
Q 014714 109 KLHLHIASFNNFPTAAGLASSAAGFACLVFSLAKLMNLKEN---------------QSQLSAIARQ--------GSG-SA 164 (420)
Q Consensus 109 ~~~v~I~s~nniP~aaGLGSSAA~~aA~v~Al~~l~~l~ls---------------~~eL~~iAr~--------gsG-sa 164 (420)
..++.|.+.+++|.++|||||||..+|++.|++.+++...+ .+++.++|.+ +|| +.
T Consensus 126 ~~g~~i~i~s~lP~g~GLGSSAAl~va~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~lA~~~E~~~~g~~SG~D~ 205 (225)
T d1kvka1 126 LPSLDIMVWSELPPGAGLGSSAAYSVCVAAALLTACEEVTNPLKDRGSIGSWPEEDLKSINKWAYEGERVIHGNPSGVDN 205 (225)
T ss_dssp CCCEEEEEEESSCTTSSSCHHHHHHHHHHHHHHHHTTSSCCGGGGCCSEECCCHHHHHHHHHHHHHHHHHHHSSCCSHHH
T ss_pred CCCeEEEEeCCCCCCcccccchHHHHHHHHHHHHHhCcccCccccchhccccchhhHHHHHHHHHHHHHHhCCCCcHHHH
Confidence 46889999999999999999999999999999999998654 3567777743 345 55
Q ss_pred ccccccCeEEEecc
Q 014714 165 CRSLFGGFVKWILG 178 (420)
Q Consensus 165 ~~sl~GG~V~~~~g 178 (420)
+-|.|||++.+.+|
T Consensus 206 a~~~~Gg~i~f~~g 219 (225)
T d1kvka1 206 SVSTWGGALRYQQG 219 (225)
T ss_dssp HHHHHCSEEEESSS
T ss_pred HHHhcCceEEEeCC
Confidence 67999999877665
No 12
>d1wuua1 d.14.1.5 (A:2-216) Galactokinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.04 E-value=4.1e-09 Score=95.46 Aligned_cols=138 Identities=17% Similarity=0.156 Sum_probs=91.7
Q ss_pred EEEEecceeEEEeeeccccCCCCCCCCCeeEeeeCCCCceeEEEEEEcCCCCcceEEE---------------cCccccC
Q 014714 10 VTAQTPTNIAVIKYWGKRDETLILPVNDSISVTLDPDHLCTTTTVAVSPSFDQDRMWL---------------NGKEISL 74 (420)
Q Consensus 10 ~~~~Ap~nIa~ikywGkrd~~~~lP~~dSisvtL~~~~L~~~t~v~~~~~~~~d~i~l---------------nG~~~~~ 74 (420)
+.++||..|.++ |.+-+-+ +...|.++++ +++.+++...++. ..++.- +......
T Consensus 29 ~i~~APGrv~L~---GEH~dy~---Gg~vl~~Ai~---~~~~v~~~~~~d~-~i~v~s~~~~~~~~~~~~~~~~~~~~~~ 98 (215)
T d1wuua1 29 LAVSAPGRVNLI---GEHTDYN---QGLVLPMALE---LMTVLVGSPRKDG-LVSLLTTSEGADEPQRLQFPLPTAQRSL 98 (215)
T ss_dssp EEEEEEEEEEEE---CTTCGGG---TCEEEEEEEE---EEEEEEEEEETTC-EEEEEECCSSSCSCSEEEEECCCSSCCC
T ss_pred EEEEcceEEEEe---cCCeeeC---CceEEeeecc---CcEEEEEEecCCC-EEEEEEccCCCCcceEEeeccccccccc
Confidence 578999999997 5554433 3558999998 7888888765421 122221 1111011
Q ss_pred C--cchHHHHHHHHHHHccccccccccccccccccccccEEEEEecCCCCccccccchHHHHHHHHHHHHHhCCCCCHHH
Q 014714 75 G--GGRYQNCLKEIRSRACDVEDTEKGIKIEKKDWQKLHLHIASFNNFPTAAGLASSAAGFACLVFSLAKLMNLKENQSQ 152 (420)
Q Consensus 75 ~--~~r~~~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~v~I~s~nniP~aaGLGSSAA~~aA~v~Al~~l~~l~ls~~e 152 (420)
. .......+..+....... ...++.|.+.++||.++|||||||..+|++.|++++++++++.++
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~--------------~~~g~~i~i~S~iP~gaGLgSSAA~~val~~al~~~~~~~~~~~~ 164 (215)
T d1wuua1 99 EPGTPRWANYVKGVIQYYPAA--------------PLPGFSAVVVSSVPLGGGLSSSASLEVATYTFLQQLCPDSGTIAA 164 (215)
T ss_dssp CCCSSGGGHHHHHHHHHCSSS--------------CCCEEEEEEEECSCTTSSSCHHHHHHHHHHHHHHHHSCCCSCHHH
T ss_pred ccccchhhhhhhhhHhhhccC--------------CCCCeEEEEecCcccCcccccchHHHHHHHHHHHHHhcccccHHH
Confidence 1 111122222222222210 135788888999999999999999999999999999999999999
Q ss_pred HHHHHHhcc----Cc------cccccccC
Q 014714 153 LSAIARQGS----GS------ACRSLFGG 171 (420)
Q Consensus 153 L~~iAr~gs----Gs------a~~sl~GG 171 (420)
+.++|.+.+ |. -+.|+||+
T Consensus 165 la~~a~~~E~~~~G~~~G~mDq~as~~g~ 193 (215)
T d1wuua1 165 RAQVCQQAEHSFAGMPCGIMDQFISLMGQ 193 (215)
T ss_dssp HHHHHHHHHHHHTCCCCCSHHHHHHHHCC
T ss_pred HHHHHHHHHHHhcCCCCcHHHHHHHHhCC
Confidence 999997652 33 35588888
No 13
>d1ueka2 d.58.26.5 (A:149-268) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Thermus thermophilus [TaxId: 274]}
Probab=98.21 E-value=4.5e-07 Score=74.53 Aligned_cols=109 Identities=8% Similarity=0.015 Sum_probs=69.3
Q ss_pred CCceEEEEEECCCCCccCchHHhhhhhccchhHHHHHhhhchHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhhhccccCC
Q 014714 198 NDLVIIIAVVSSRQKETSSTTGMRESVETSLLLQHRAKEVVPKRIVQMEEAIQNHDFSSFAQLTCADSNQFHAVCLDTSP 277 (420)
Q Consensus 198 p~l~~vvlvv~~~~k~vsst~~m~~~~~ts~~~~~~~~~~~~~~~~~l~~Al~~~D~~~f~~~~~~dsn~lha~~~~~~p 277 (420)
|.++++ +|.|. ..++|.+.+++..++. .. .......+..++..+++..+ .|.|..+.+..
T Consensus 2 Ppl~~v-lv~P~--~~vST~~~y~~~~~~~------~~--~~~~~~~~~~~~~~~~~~~~-------~Ndle~~~~~~-- 61 (120)
T d1ueka2 2 PPVPAV-VFFPG--LRVPTPLVYRAVRPED------FG--PDLPVEAILEALARGEEPPY-------WNSLEGPAFRL-- 61 (120)
T ss_dssp CCEEEE-EEECC--CCCCHHHHHHTCCGGG------CC--CCCCHHHHHHHHHHTCCCSC-------CBTTHHHHHHH--
T ss_pred CCCeEE-EECCC--CCccHHHHHHHhchhc------cc--ccCCHHHHHHHHHhhcHHHH-------hCchHHHHHHH--
Confidence 456665 45554 4788777766543211 11 12245566677777764321 25666555544
Q ss_pred CccccCchHHHHHHHHHHHHHhcCCCcEEEeeCCCCceEEEeeccchHHHHHHHHHhhC
Q 014714 278 PIFYMNDTSHRIISYVERWNRSVGSPQVAYTFDAGPNAVLIARNRKIATELLQRLLFFF 336 (420)
Q Consensus 278 ~~~yl~~~s~~ii~~v~~~~~~~Ga~~~a~tsgAGPtv~~i~~~~~~~~~v~~~l~~~f 336 (420)
.|...++++.+.+ .|+. .+.+|||||++|+++.+++.++++.+.+++.+
T Consensus 62 -----~p~l~~~~~~l~~----~g~~-~~~mSGSGst~F~l~~~~~~a~~~~~~l~~~~ 110 (120)
T d1ueka2 62 -----FPELKEVRGRMRA----LGLR-GVLMSGSGSAFFGLAEGPDHARRAAEALRAWG 110 (120)
T ss_dssp -----CTHHHHHHHHHHH----TTCE-EEEECTTSSCEEEECSSHHHHHHHHHHHTTTS
T ss_pred -----HhhHHHHHHHHHH----hhhh-heeecCCCCeEEEEeCCHHHHHHHHHHHHHhC
Confidence 4577777777764 5876 56788999999999998887766777776654
No 14
>d1wuua2 d.58.26.7 (A:217-392) Galactokinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.79 E-value=0.00011 Score=63.99 Aligned_cols=87 Identities=14% Similarity=0.166 Sum_probs=61.0
Q ss_pred hHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhhhccccCCCccccCchHHHHHHHHHHHHHhcCCCcEEEeeCCCCc--eE
Q 014714 239 PKRIVQMEEAIQNHDFSSFAQLTCADSNQFHAVCLDTSPPIFYMNDTSHRIISYVERWNRSVGSPQVAYTFDAGPN--AV 316 (420)
Q Consensus 239 ~~~~~~l~~Al~~~D~~~f~~~~~~dsn~lha~~~~~~p~~~yl~~~s~~ii~~v~~~~~~~Ga~~~a~tsgAGPt--v~ 316 (420)
..|+.....|++++|++.|+++|. +-|..+++.|- --.|....+++...+ ..|++++-+| |+|-. ++
T Consensus 69 ~~Rv~~~~~al~~~d~~~lg~Lm~----~sh~sL~~~~~---vS~peld~lv~~a~~---~~G~lGaRlt-GaGfGGcvi 137 (176)
T d1wuua2 69 IRRTAQAAAALRRGDYRAFGRLMV----ESHRSLRDDYE---VSCPELDQLVEAALA---VPGVYGSRMT-GGGFGGCTV 137 (176)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHH----HHHHHHHHTSC---CCCHHHHHHHHHHHT---STTEEEEEEC-SSCSEEEEE
T ss_pred HHhhHHHHHHhhccCHHHHHHHHH----HHHHHHHHHHh---ccChhHHHHHHHHHh---cCCCceeeec-cCCCCcEEE
Confidence 568889999999999999999974 44555555432 224566666665543 2488766666 77755 66
Q ss_pred EEeeccchHHHHHHHHHhhCC
Q 014714 317 LIARNRKIATELLQRLLFFFP 337 (420)
Q Consensus 317 ~i~~~~~~~~~v~~~l~~~f~ 337 (420)
++++++..++ +.+.+.+.|.
T Consensus 138 aLv~~~~~~~-~~~~~~~~yg 157 (176)
T d1wuua2 138 TLLEASAAPH-AMRHIQEHYG 157 (176)
T ss_dssp EEEEGGGHHH-HHHHHHHHCS
T ss_pred EEechhhHHH-HHHHHHHHhC
Confidence 6677777777 9998888773
No 15
>d1piea2 d.58.26.7 (A:214-396) Galactokinase {Lactococcus lactis [TaxId: 1358]}
Probab=97.61 E-value=9.3e-05 Score=64.96 Aligned_cols=88 Identities=14% Similarity=0.162 Sum_probs=63.6
Q ss_pred hHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhhhccccCCCccccCchHHHHHHHHHHHHHhcCCCcEEEeeCCC--CceE
Q 014714 239 PKRIVQMEEAIQNHDFSSFAQLTCADSNQFHAVCLDTSPPIFYMNDTSHRIISYVERWNRSVGSPQVAYTFDAG--PNAV 316 (420)
Q Consensus 239 ~~~~~~l~~Al~~~D~~~f~~~~~~dsn~lha~~~~~~p~~~yl~~~s~~ii~~v~~~~~~~Ga~~~a~tsgAG--Ptv~ 316 (420)
..|+.....||+++|++.|+++|. +-|..+++.|. -.+|+...+++...+ ..|+.++-+| |+| ..++
T Consensus 74 n~Rv~~a~~al~~~d~~~~G~lm~----~Sh~sl~~~~e---vs~~elD~Lv~~a~~---~~G~~GaRmt-GgGfGGcvi 142 (183)
T d1piea2 74 NNRTKIAQKAFVAGNLTKFGELLN----ASHASLKDDYE---VTGLELDTLAETAQK---QAGVLGARMT-GAGFGGCAI 142 (183)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHH----HHHHHHHHTSC---CCCHHHHHHHHHHHH---STTEEEEEEC-SSCSSSEEE
T ss_pred HHHHHHhhhhhhhccHHHHHHHHH----HHHHHHHHHhc---CCCchHHHHHHHHHH---hCCCeEeecc-ccCCCceEE
Confidence 568999999999999999999984 44555555432 235666666666543 3588766655 766 6688
Q ss_pred EEeeccchHHHHHHHHHhhCCC
Q 014714 317 LIARNRKIATELLQRLLFFFPP 338 (420)
Q Consensus 317 ~i~~~~~~~~~v~~~l~~~f~~ 338 (420)
++++.+..++ +.+.+.+.|..
T Consensus 143 alv~~~~~~~-~~~~i~~~y~~ 163 (183)
T d1piea2 143 ALVAHDNVSA-FRKAVGQVYEE 163 (183)
T ss_dssp EEEEGGGHHH-HHHHHHHHHHH
T ss_pred EEecHHHHHH-HHHHHHHHHHH
Confidence 8888877777 99998887654
No 16
>d1s4ea2 d.58.26.7 (A:181-351) Galactokinase {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=97.60 E-value=7.8e-05 Score=64.79 Aligned_cols=88 Identities=14% Similarity=0.176 Sum_probs=62.9
Q ss_pred hHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhhhccccCCCccccCchHHHHHHHHHHHHHhcCCCcEEEeeCCCCc--eE
Q 014714 239 PKRIVQMEEAIQNHDFSSFAQLTCADSNQFHAVCLDTSPPIFYMNDTSHRIISYVERWNRSVGSPQVAYTFDAGPN--AV 316 (420)
Q Consensus 239 ~~~~~~l~~Al~~~D~~~f~~~~~~dsn~lha~~~~~~p~~~yl~~~s~~ii~~v~~~~~~~Ga~~~a~tsgAGPt--v~ 316 (420)
..|+.+...||+++|++.|+++|. +-|..+++.|. --+|....+++... ..|++++-+| |+|-. ++
T Consensus 65 n~Rv~~~~~al~~~d~~~~G~lm~----~sh~sl~~~~e---vS~~eld~lv~~a~----~~Ga~GaRmt-GgGfGG~vi 132 (171)
T d1s4ea2 65 NARVLEVRDALKEGDIEKVGKILT----TAHWDLAENYR---VSCEELDFFVKKAM----ELGAYGARLT-GAGFGGSAI 132 (171)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHH----HHHHHHHHTTC---CCCHHHHHHHHHHH----HTTCSEEEEC-SSCSEEEEE
T ss_pred HHHHHHHHHHhhcccHHHHHHHHH----HHHHHHHHhhc---cCCHHHHHHHHHHh----hcccCceeee-cCCCCcEEE
Confidence 458899999999999999999984 34555555432 23466666665554 3699867666 88765 66
Q ss_pred EEeeccchHHHHHHHHHhhCCCC
Q 014714 317 LIARNRKIATELLQRLLFFFPPN 339 (420)
Q Consensus 317 ~i~~~~~~~~~v~~~l~~~f~~~ 339 (420)
++++.+..++ +.+.+.+.|...
T Consensus 133 aLv~~~~~~~-~~~~i~~~y~~~ 154 (171)
T d1s4ea2 133 ALVDKDKAKT-IGDAILREYLAK 154 (171)
T ss_dssp EEEEGGGHHH-HHHHHHHHHHHH
T ss_pred EEecHHHHHH-HHHHHHHHHHHh
Confidence 7777777777 999888877544
No 17
>d1k47a2 d.58.26.4 (A:195-329) Phosphomevalonate kinase (PMK) {Streptococcus pneumoniae r6 [TaxId: 171101]}
Probab=96.87 E-value=0.0035 Score=51.56 Aligned_cols=106 Identities=9% Similarity=0.096 Sum_probs=59.8
Q ss_pred CchHHhhhhhccchhHHHHHhhhchHHHHHHHHHHHcCCHHHHHHHHHhhhhhhhhhccccCCCccccCchHHHHHHHHH
Q 014714 215 SSTTGMRESVETSLLLQHRAKEVVPKRIVQMEEAIQNHDFSSFAQLTCADSNQFHAVCLDTSPPIFYMNDTSHRIISYVE 294 (420)
Q Consensus 215 sst~~m~~~~~ts~~~~~~~~~~~~~~~~~l~~Al~~~D~~~f~~~~~~dsn~lha~~~~~~p~~~yl~~~s~~ii~~v~ 294 (420)
.+|..|...+.+ ..++..++. ....+..+..||.++|++.|+++|..+...+.... ....+|...++++.++
T Consensus 17 ~sT~~lv~~v~~-~~~~~~l~~-~~~~v~~~~~al~~~d~~~l~~~m~~~~~ll~~l~------~~i~~~~l~~l~~~a~ 88 (135)
T d1k47a2 17 AVSSHMVQQIKQ-NINQNFLTS-SKETVVSLVEALEQGKSEKIIEQVEVASKLLEGLS------TDIYTPLLRQLKEASQ 88 (135)
T ss_dssp CCCHHHHHHHHT-TCCHHHHHH-HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHC------TTTSCHHHHHHHHTTT
T ss_pred ccHHHHHHHHHH-HHHhHHHHH-HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcc------ccCCChHHHHHHHHHH
Confidence 455555443332 122333333 35578889999999999999999865443333221 1233566666665554
Q ss_pred HHHHhcCCCcEEEeeCCCCc--eEEEeeccchHHHHHHHHHh
Q 014714 295 RWNRSVGSPQVAYTFDAGPN--AVLIARNRKIATELLQRLLF 334 (420)
Q Consensus 295 ~~~~~~Ga~~~a~tsgAGPt--v~~i~~~~~~~~~v~~~l~~ 334 (420)
..|+ ++. .+|||-. +++|+.+++..+.+.+++.+
T Consensus 89 ----~~g~-~ak-~~GaGgGG~~i~l~~~~~~~~~i~~~~~~ 124 (135)
T d1k47a2 89 ----DLQA-VAK-SSGAGGGDCGIALSFDAQSTKTLKNRWAD 124 (135)
T ss_dssp ----TSSE-EEE-ECSSCSSSEEEEEECSHHHHHHHHHHHHH
T ss_pred ----Hhcc-chh-cccCcCCCeEEEEecChhhHHHHHHHHHH
Confidence 3565 244 5588766 55555544433336666655
No 18
>d1kkha2 d.58.26.3 (A:181-317) Mevalonate kinase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=96.66 E-value=0.014 Score=48.06 Aligned_cols=75 Identities=19% Similarity=0.261 Sum_probs=47.4
Q ss_pred HHHHHHcCCHHHHHHHHHhhhhhhhhhccccCCCccccCchHHHHHHHHHHHHHhcCCCcEEEeeCCCCceEE--Eeecc
Q 014714 245 MEEAIQNHDFSSFAQLTCADSNQFHAVCLDTSPPIFYMNDTSHRIISYVERWNRSVGSPQVAYTFDAGPNAVL--IARNR 322 (420)
Q Consensus 245 l~~Al~~~D~~~f~~~~~~dsn~lha~~~~~~p~~~yl~~~s~~ii~~v~~~~~~~Ga~~~a~tsgAGPtv~~--i~~~~ 322 (420)
..+||.++|++.|+++|..++..+... --.+|....+++...+ .| .++.+ +|||-.-|+ +++++
T Consensus 49 ~~~al~~~d~~~lg~lm~~~~~~l~~l--------gvs~~~id~l~~~~~~----~g-~GaKi-tGAGgGG~~ial~~~~ 114 (137)
T d1kkha2 49 IDEALKIKNKEDFGKLMTKNHELLKKL--------NISTPKLDRIVDIGNR----FG-FGAKL-TGAGGGGCVIILVNEE 114 (137)
T ss_dssp HHHHHHCCSHHHHHHHHHHHHHHHHTT--------TCCCHHHHHHHHHHHH----HS-SEEEE-CSSSSSEEEEEECCGG
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHh--------cCCcHHHHHHHHHHHh----cC-CCccc-ccCCCCcEEEEEeChh
Confidence 447899999999999986554443322 1235666666666654 46 44554 499966544 45555
Q ss_pred chHHHHHHHHHh
Q 014714 323 KIATELLQRLLF 334 (420)
Q Consensus 323 ~~~~~v~~~l~~ 334 (420)
...+ +.+.+.+
T Consensus 115 ~~~~-~~~~l~~ 125 (137)
T d1kkha2 115 KEKE-LLKELNK 125 (137)
T ss_dssp GHHH-HHHHHHT
T ss_pred hHHH-HHHHHHH
Confidence 5555 7777665
No 19
>d1oj4a2 d.58.26.5 (A:164-283) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Escherichia coli [TaxId: 562]}
Probab=96.43 E-value=0.00068 Score=55.06 Aligned_cols=55 Identities=9% Similarity=0.076 Sum_probs=37.3
Q ss_pred hhhhhhccccCCCccccCchHHHHHHHHHHHHHhcCCCcEEEeeCCCCceEEEeeccchHHHHHHHHHh
Q 014714 266 NQFHAVCLDTSPPIFYMNDTSHRIISYVERWNRSVGSPQVAYTFDAGPNAVLIARNRKIATELLQRLLF 334 (420)
Q Consensus 266 n~lha~~~~~~p~~~yl~~~s~~ii~~v~~~~~~~Ga~~~a~tsgAGPtv~~i~~~~~~~~~v~~~l~~ 334 (420)
|.|..+.+..+ |+..++++.+.+ .|. +.+||+|||+|+++++++.++.+.+.+.+
T Consensus 46 Ndle~~~~~~~-------P~I~~~~~~L~~----~g~---~~MSGSGstvF~~f~~~~~a~~~~~~l~~ 100 (120)
T d1oj4a2 46 NDCEVIARKRF-------REVDAVLSWLLE----YAP---SRLTGTGACVFAEFDTESEARQVLEQAPE 100 (120)
T ss_dssp BTTHHHHHHHC-------HHHHHHHHHHTT----TSC---EEECTTSSCEEEEESSHHHHHHHHHHSCG
T ss_pred CChHHHHHHhC-------HHHHHHHHHHhh----ccc---ceecCCCCEEEEEeCCHHHHHHHHHHcCc
Confidence 67777776554 456666666543 453 46789999999999988766545555433
No 20
>d1kvka2 d.58.26.3 (A:226-394) Mevalonate kinase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=96.33 E-value=0.019 Score=48.89 Aligned_cols=71 Identities=8% Similarity=0.100 Sum_probs=44.5
Q ss_pred cCCHHHHHHHHHhhhhhhhhhccccCCCccccCchHHHHHHHHHHHHHhcCCCcEEEeeCCCCc--eEEEeeccchHHHH
Q 014714 251 NHDFSSFAQLTCADSNQFHAVCLDTSPPIFYMNDTSHRIISYVERWNRSVGSPQVAYTFDAGPN--AVLIARNRKIATEL 328 (420)
Q Consensus 251 ~~D~~~f~~~~~~dsn~lha~~~~~~p~~~yl~~~s~~ii~~v~~~~~~~Ga~~~a~tsgAGPt--v~~i~~~~~~~~~v 328 (420)
++|++.|+++|..++..+.... -.+|....+++..++ .|. ++.+| |||-. +++++++....+ +
T Consensus 63 ~~d~~~lg~lm~~~~~lL~~lg--------VS~~~ld~lv~~a~~----~g~-gaKlt-GAGgGGc~ial~~~~~~~~-~ 127 (169)
T d1kvka2 63 PEQYLVLEELMDMNQHHLNALG--------VGHASLDQLCQVTAA----HGL-HSKLT-GAGGGGCGITLLKPGLERA-K 127 (169)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT--------CCCHHHHHHHHHHHH----TTC-EEEEC-SSCSSSEEEEEECTTCCHH-H
T ss_pred cchHHHHHHHHHHhHHHHHhcC--------cChHHHHHHHHHHHH----cCc-ccccc-CCCCCCeEEEEecccchHH-H
Confidence 4799999999866544444332 235667766666654 574 56655 88654 555666665555 6
Q ss_pred HHHHHhhC
Q 014714 329 LQRLLFFF 336 (420)
Q Consensus 329 ~~~l~~~f 336 (420)
.+.+.+.+
T Consensus 128 ~~~i~~~l 135 (169)
T d1kvka2 128 VEAAKQAL 135 (169)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66666654
No 21
>d1vola2 a.74.1.2 (A:208-316) Transcription factor IIB (TFIIB), core domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.00 E-value=16 Score=27.29 Aligned_cols=32 Identities=19% Similarity=0.178 Sum_probs=26.8
Q ss_pred cchHHHHHHHHHHHHHhCCCCCHHHHHHHHHh
Q 014714 128 SSAAGFACLVFSLAKLMNLKENQSQLSAIARQ 159 (420)
Q Consensus 128 SSAA~~aA~v~Al~~l~~l~ls~~eL~~iAr~ 159 (420)
+=.+.+||.++.++++.|.+.+..|+++++..
T Consensus 42 ~p~~iaAa~iY~a~r~~~~~~t~~eIa~~~~v 73 (109)
T d1vola2 42 SPISVAAAAIYMASQASAEKRTQKEIGDIAGV 73 (109)
T ss_dssp CHHHHHHHHHHHHHHTSSSCCCHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHHHcCCCCCHHHHHHHHCC
Confidence 44667888889999999999999999988843
No 22
>d1aisb2 a.74.1.2 (B:1206-1300) Transcription factor IIB (TFIIB), core domain {Archaeon Pyrococcus woesei [TaxId: 2262]}
Probab=26.72 E-value=34 Score=24.47 Aligned_cols=30 Identities=23% Similarity=0.275 Sum_probs=25.9
Q ss_pred chHHHHHHHHHHHHHhCCCCCHHHHHHHHH
Q 014714 129 SAAGFACLVFSLAKLMNLKENQSQLSAIAR 158 (420)
Q Consensus 129 SAA~~aA~v~Al~~l~~l~ls~~eL~~iAr 158 (420)
-.+.+||.++.++++.|.+.+..|+++.+.
T Consensus 42 p~~vaAA~iY~a~r~~~~~~t~~eIa~~~~ 71 (95)
T d1aisb2 42 PAGLVAAALYIASLLEGEKRTQREVAEVAR 71 (95)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCHHHHHHHHT
T ss_pred HHhHHHHHHHHHHHHcCCCcCHHHHHHHHC
Confidence 447788899999999999999999998874
Done!