Query 014719
Match_columns 419
No_of_seqs 297 out of 978
Neff 6.5
Searched_HMMs 13730
Date Mon Mar 25 16:36:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014719.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/014719hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1st6a3 a.24.9.1 (A:253-371) V 37.5 82 0.006 24.1 9.1 66 23-90 52-117 (119)
2 d1st6a5 a.24.9.1 (A:489-646) V 31.1 1.2E+02 0.0089 24.2 9.0 80 6-93 25-113 (158)
3 d1st6a4 a.24.9.1 (A:372-488) V 28.9 1.1E+02 0.0084 23.2 8.9 53 37-89 55-107 (117)
4 d1tqga_ a.24.10.3 (A:) Chemota 26.3 1E+02 0.0076 22.0 7.4 56 22-82 42-97 (105)
5 d1i5na_ a.24.10.3 (A:) Chemota 23.3 1.3E+02 0.0098 22.1 7.9 66 21-94 40-105 (128)
6 d2a26a1 a.2.16.1 (A:1-47) Calc 19.0 82 0.006 19.8 4.2 32 173-205 11-42 (47)
7 d1s0pa_ a.192.1.1 (A:) N-termi 18.6 1.2E+02 0.0087 24.7 6.6 77 128-230 20-98 (176)
8 d1rw6a_ a.47.4.1 (A:) CAPPD, a 17.9 2.3E+02 0.017 23.2 8.4 85 51-140 99-190 (192)
9 d1i5na_ a.24.10.3 (A:) Chemota 17.5 1.8E+02 0.013 21.3 7.8 11 74-84 59-69 (128)
10 d1zl8a1 a.194.1.1 (A:4-53) Lin 14.3 95 0.007 20.0 3.7 20 44-63 1-20 (50)
No 1
>d1st6a3 a.24.9.1 (A:253-371) Vinculin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=37.50 E-value=82 Score=24.14 Aligned_cols=66 Identities=12% Similarity=0.091 Sum_probs=48.6
Q ss_pred HHHHHHHHHhhHHHHhHHHHHHHHHHHHHHHHHHHHHhhhccCCChhhhhHHHHHHHHHHHHHHHHHH
Q 014719 23 RLIGMIVKAATTARMHKKNCRQFAQHLKLIGNLLEQLKISELKKYPETREPLEQLEDALRRSYLLVNS 90 (419)
Q Consensus 23 ~la~~I~~aa~~a~~~kk~C~~Larrv~lL~~lLeeL~~~~~~~~~~~~~~L~~L~~aL~~Ak~Lv~~ 90 (419)
+=+.+|+.... ..+|..-..+..-|..+..=|-+|+..+-..+|.+..-=..|...|+.-+..|+.
T Consensus 52 ~earkva~~~~--~~~r~~Il~~c~ei~~lt~qLadLr~~G~G~sPeA~~lA~qi~~kL~~L~~~v~~ 117 (119)
T d1st6a3 52 DEAGKAGELCA--GKERREILGTCKTLGQMTDQLADLRARGQGATPMAMQKAQQVSQGLDLLTAKVEN 117 (119)
T ss_dssp HHHHHHHHTTC--STTHHHHHHHHHHHHHHHHHHHHHTTTTCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCC--chhHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34555555442 5677888888888888888899998877778888887777777777776666553
No 2
>d1st6a5 a.24.9.1 (A:489-646) Vinculin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=31.08 E-value=1.2e+02 Score=24.22 Aligned_cols=80 Identities=13% Similarity=0.169 Sum_probs=48.7
Q ss_pred hhhhHHHHHHHhhccHHHHHHHHHHHhhHHHHhHHHHHHHHHHHHHHHHHHHHHhhhccCCChhhhh-------HHHHHH
Q 014719 6 HFGEIANVAQLAGFDAVRLIGMIVKAATTARMHKKNCRQFAQHLKLIGNLLEQLKISELKKYPETRE-------PLEQLE 78 (419)
Q Consensus 6 ~~~~~a~v~ql~g~d~~~la~~I~~aa~~a~~~kk~C~~Larrv~lL~~lLeeL~~~~~~~~~~~~~-------~L~~L~ 78 (419)
++|+.| |.|++ .=+..|+.... ...|.....+...|..|..=|-+|+..+...+|.+.. .|.+|.
T Consensus 25 glGe~A-ir~iv-----~earrvA~~~~--~~~r~~Il~~C~el~~l~~~LadLr~~G~G~sPeA~~lA~qi~~kL~dL~ 96 (158)
T d1st6a5 25 GVGQAA-IRGLV-----AEGRRLANVMM--GPYRQDLLAKCDRVDQLAAQLADLAARGEGESPQARAIAAQLQDSLKDLK 96 (158)
T ss_dssp SCSHHH-HHHHH-----HHHHHHHHTSC--HHHHHHHHHHHHHHHHHHHHHHSSTTSSCCSSHHHHHHHHHHHHHHHHHH
T ss_pred cccHHH-HHHHH-----HHHHHHHHhcC--chhHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 466654 44444 23555554444 3378888888888888888888887666555664433 355666
Q ss_pred HHHHHHH--HHHHHhcc
Q 014719 79 DALRRSY--LLVNSCQD 93 (419)
Q Consensus 79 ~aL~~Ak--~Lv~~C~~ 93 (419)
..+++|- ..+++..+
T Consensus 97 ~~v~~Avv~~v~d~f~d 113 (158)
T d1st6a5 97 ARMQEAMTQEVSDVFSD 113 (158)
T ss_dssp HHHHHHHHHHHHHHSSC
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 6666555 44555554
No 3
>d1st6a4 a.24.9.1 (A:372-488) Vinculin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=28.92 E-value=1.1e+02 Score=23.20 Aligned_cols=53 Identities=15% Similarity=0.161 Sum_probs=40.6
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHhhhccCCChhhhhHHHHHHHHHHHHHHHHH
Q 014719 37 MHKKNCRQFAQHLKLIGNLLEQLKISELKKYPETREPLEQLEDALRRSYLLVN 89 (419)
Q Consensus 37 ~~kk~C~~Larrv~lL~~lLeeL~~~~~~~~~~~~~~L~~L~~aL~~Ak~Lv~ 89 (419)
.+|..-..+...|..+..=|-+|+..+-..+|.+..-=..|...|+.-+..|+
T Consensus 55 ~~r~~il~lc~ei~~lt~qLadLr~~GkG~sPeA~~lA~qi~~kL~~L~~~v~ 107 (117)
T d1st6a4 55 KERDDILRSLGEISALTAKLSDLRRHGKGDSPEARALAKQIATSLQNLQSKTN 107 (117)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 46888888888888888888999877777788777766677777666665554
No 4
>d1tqga_ a.24.10.3 (A:) Chemotaxis protein CheA P1 domain {Thermotoga maritima [TaxId: 2336]}
Probab=26.26 E-value=1e+02 Score=21.97 Aligned_cols=56 Identities=18% Similarity=0.191 Sum_probs=32.0
Q ss_pred HHHHHHHHHHhhHHHHhHHHHHHHHHHHHHHHHHHHHHhhhccCCChhhhhHHHHHHHHHH
Q 014719 22 VRLIGMIVKAATTARMHKKNCRQFAQHLKLIGNLLEQLKISELKKYPETREPLEQLEDALR 82 (419)
Q Consensus 22 ~~la~~I~~aa~~a~~~kk~C~~Larrv~lL~~lLeeL~~~~~~~~~~~~~~L~~L~~aL~ 82 (419)
...+..|...+..+ ....++.....+..+|+.+++...+.++.....|..-.+.|+
T Consensus 42 ~R~~HTLKG~a~~~-----gl~~i~~lah~lE~~l~~~~~~~~~~~~~~~~~l~~~~d~l~ 97 (105)
T d1tqga_ 42 FRALHTLKGMAGTM-----GFSSMAKLCHTLENILDKARNSEIKITSDLLDKIFAGVDMIT 97 (105)
T ss_dssp HHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCchhhc-----CHHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Confidence 34445555444444 234566666677778888887666666655554444443333
No 5
>d1i5na_ a.24.10.3 (A:) Chemotaxis protein CheA P1 domain {Salmonella typhimurium [TaxId: 90371]}
Probab=23.34 E-value=1.3e+02 Score=22.09 Aligned_cols=66 Identities=14% Similarity=0.128 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHhhHHHHhHHHHHHHHHHHHHHHHHHHHHhhhccCCChhhhhHHHHHHHHHHHHHHHHHHhccc
Q 014719 21 AVRLIGMIVKAATTARMHKKNCRQFAQHLKLIGNLLEQLKISELKKYPETREPLEQLEDALRRSYLLVNSCQDR 94 (419)
Q Consensus 21 ~~~la~~I~~aa~~a~~~kk~C~~Larrv~lL~~lLeeL~~~~~~~~~~~~~~L~~L~~aL~~Ak~Lv~~C~~~ 94 (419)
++..+..|...+..+ ....++.-...+..+|..+++...+.++..... |..+++.-+.++..-..+
T Consensus 40 l~R~~HTLKG~a~~~-----gl~~i~~lah~lE~~l~~lr~~~~~~~~~~~~~---l~~~~d~l~~~l~~~~~~ 105 (128)
T d1i5na_ 40 IFRAAHSIKGGAGTF-----GFTILQETTHLMENLLDEARRGEMQLNTDIINL---FLETKDIMQEQLDAYKNS 105 (128)
T ss_dssp HHHHHHHHHHHHHHT-----TCHHHHHHHHHHHHHHHHHHTTSSCCCHHHHHH---HHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhhHHhhc-----ChHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHH---HHHHHHHHHHHHHHHHcC
Confidence 344455555555554 335666677777788888887666666665444 445555555566655433
No 6
>d2a26a1 a.2.16.1 (A:1-47) Calcyclin-binding protein, CacyBP {Human (Homo sapiens) [TaxId: 9606]}
Probab=19.00 E-value=82 Score=19.82 Aligned_cols=32 Identities=19% Similarity=0.279 Sum_probs=21.6
Q ss_pred HHHHHHhhcCCCCCccchHHHHHHHHHHHHHHH
Q 014719 173 MVLKKTLSTSYPKMGFNEVLQKENEKLQLELQR 205 (419)
Q Consensus 173 ~~l~~~~~~~~~~L~l~s~l~~E~~~L~~el~~ 205 (419)
..+++++.+ +.+=.+...|..|..+|+-||.+
T Consensus 11 eEvk~LLek-aTRkRvrd~Lt~Ek~kletEik~ 42 (47)
T d2a26a1 11 EEVKVLLEK-ATRKRVRDALTAEKSKIETEIKN 42 (47)
T ss_dssp HHHHHHHHH-CCSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 566666666 33344555688888888888853
No 7
>d1s0pa_ a.192.1.1 (A:) N-terminal domain of adenylylcyclase associated protein, CAP {Dictyostelium discoideum [TaxId: 44689]}
Probab=18.58 E-value=1.2e+02 Score=24.66 Aligned_cols=77 Identities=12% Similarity=0.145 Sum_probs=45.0
Q ss_pred hhhhhhHHHHHHHHHHHhhhhhcCChhhHHHHHHHhh--cCCCCccHHHHHHHhhcCCCCCccchHHHHHHHHHHHHHHH
Q 014719 128 TLVDNARVRERLEDIEKDQREYTLDEEDQKMQDAILR--REPSKHETMVLKKTLSTSYPKMGFNEVLQKENEKLQLELQR 205 (419)
Q Consensus 128 ~l~is~ev~Eqvelv~~q~r~~~~d~~d~~l~~~il~--~e~~~~d~~~l~~~~~~~~~~L~l~s~l~~E~~~L~~el~~ 205 (419)
+-.|..+|.|+..+|.+.+. .+..++. .....||...+..++.- +.+.+.++....+.
T Consensus 20 s~~Igg~V~~~a~~v~~aF~----------~qr~~L~~a~~~kKP~~~~~~~ll~p----------l~~~i~~i~~~re~ 79 (176)
T d1s0pa_ 20 SKKLAPEVGNQVEQLVKAID----------AEKALINTASQSKKPSQETLLELIKP----------LNNFAAEVGKIRDS 79 (176)
T ss_dssp HHHHCHHHHHHHHHHHHHHH----------HHHHHHHHHHHEECCCHHHHHHHTHH----------HHHHHHHHHHHHHT
T ss_pred HHHhCHHHHHHHHHHHHHHH----------HHHHHHHHHHhcCCCCcHHHHHHHHH----------HHHHHHHHHHHHHh
Confidence 34455667788888876544 1222333 22334777777777766 66666666665443
Q ss_pred hhccCChhhhHHHHHHHHHHHhhhc
Q 014719 206 SQTQMDVSQCEVIQRLIDVTEAFSA 230 (419)
Q Consensus 206 ~~~~~d~~~~~~i~~Li~ll~~~~~ 230 (419)
.+ ..+ +.+||-++-+-+.+
T Consensus 80 nR--~s~----~fNHLsavsEgi~a 98 (176)
T d1s0pa_ 80 NR--SSK----FFNNLSAISESIGF 98 (176)
T ss_dssp CT--TCT----THHHHHHHHTSGGG
T ss_pred cC--CCc----hhHHHHHHHHhchh
Confidence 22 233 78888777766654
No 8
>d1rw6a_ a.47.4.1 (A:) CAPPD, an extracellular domain of amyloid beta A4 protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=17.91 E-value=2.3e+02 Score=23.17 Aligned_cols=85 Identities=8% Similarity=0.126 Sum_probs=52.4
Q ss_pred HHHHHHHHHhhhccCCChhhhhHHHHHHHHHHHHHHH-HHHhcc---chHHHHHhhchhhhhhHHHHHHHHHHHhccc--
Q 014719 51 LIGNLLEQLKISELKKYPETREPLEQLEDALRRSYLL-VNSCQD---RSYLYLLAMGWNIVYQFRKAQTEIDRYLKIV-- 124 (419)
Q Consensus 51 lL~~lLeeL~~~~~~~~~~~~~~L~~L~~aL~~Ak~L-v~~C~~---~Sklylll~~~~i~~~F~~V~~~I~~~L~~l-- 124 (419)
.+...+..|+. ..|.+.-+..+|..+-.|+++-+.- |..+.- .+.---.-....+..+++.+...|+++|..|
T Consensus 99 a~~~y~~al~~-~ppn~~~Vl~aLk~yira~~kDR~Htl~hf~Hl~~~dp~~A~~~r~~vl~hL~~Id~r~NqSL~lL~~ 177 (192)
T d1rw6a_ 99 ALENYITALQA-VPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSLLYN 177 (192)
T ss_dssp HHHHHHHHHTC-SSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSCCSSHHHHHHHHHHHHHHHHHHHHHHTTSSGGG
T ss_pred HHHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHcCCHHHHHHccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444454542 2344556677777777777766554 444431 1111223456779999999999999999887
Q ss_pred -CcchhhhhhHHHHHHH
Q 014719 125 -PLITLVDNARVRERLE 140 (419)
Q Consensus 125 -Pl~~l~is~ev~Eqve 140 (419)
|- +..+|+.+|+
T Consensus 178 ~P~----l~~~i~~~i~ 190 (192)
T d1rw6a_ 178 VPA----VAEEIQDEVD 190 (192)
T ss_dssp SSC----CTTTHHHHHH
T ss_pred ChH----HHHHHHHHHh
Confidence 64 4556666654
No 9
>d1i5na_ a.24.10.3 (A:) Chemotaxis protein CheA P1 domain {Salmonella typhimurium [TaxId: 90371]}
Probab=17.46 E-value=1.8e+02 Score=21.27 Aligned_cols=11 Identities=9% Similarity=0.202 Sum_probs=4.1
Q ss_pred HHHHHHHHHHH
Q 014719 74 LEQLEDALRRS 84 (419)
Q Consensus 74 L~~L~~aL~~A 84 (419)
+..|-..|...
T Consensus 59 i~~lah~lE~~ 69 (128)
T d1i5na_ 59 LQETTHLMENL 69 (128)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 33333333333
No 10
>d1zl8a1 a.194.1.1 (A:4-53) Lin-7 {Caenorhabditis elegans [TaxId: 6239]}
Probab=14.29 E-value=95 Score=19.99 Aligned_cols=20 Identities=15% Similarity=0.330 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHHHHHHhhhc
Q 014719 44 QFAQHLKLIGNLLEQLKISE 63 (419)
Q Consensus 44 ~Larrv~lL~~lLeeL~~~~ 63 (419)
+|.|-|.....||+.|+.++
T Consensus 1 ~L~rDv~RaieLle~Lq~sg 20 (50)
T d1zl8a1 1 NLERDVQRILELMEHVQKTG 20 (50)
T ss_dssp HHHHHHHHHHHHHHHHGGGS
T ss_pred ChhhHHHHHHHHHHHHHHcC
Confidence 46777888888889898654
Done!