Query 014721
Match_columns 419
No_of_seqs 308 out of 2813
Neff 7.2
Searched_HMMs 46136
Date Fri Mar 29 07:52:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014721.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014721hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK10146 aminoalkylphosphonic 99.7 8.1E-16 1.7E-20 134.1 13.6 137 17-182 2-138 (144)
2 PF13527 Acetyltransf_9: Acety 99.6 1.5E-14 3.2E-19 123.7 13.9 127 20-180 1-127 (127)
3 PRK01346 hypothetical protein; 99.6 7.1E-13 1.5E-17 136.3 27.2 177 18-228 6-189 (411)
4 PRK03624 putative acetyltransf 99.6 3.3E-14 7.1E-19 122.1 14.5 127 19-182 3-130 (140)
5 PTZ00330 acetyltransferase; Pr 99.6 1.4E-13 3E-18 120.3 16.5 135 18-182 6-141 (147)
6 PRK10140 putative acetyltransf 99.6 1.1E-13 2.4E-18 122.6 16.0 138 18-184 3-143 (162)
7 PRK09491 rimI ribosomal-protei 99.5 1.3E-13 2.8E-18 121.0 14.9 125 19-183 2-126 (146)
8 PHA00673 acetyltransferase dom 99.5 1.5E-13 3.3E-18 122.0 14.1 133 23-182 11-146 (154)
9 PF00583 Acetyltransf_1: Acety 99.5 1.9E-13 4.1E-18 107.7 12.5 83 73-178 1-83 (83)
10 TIGR02382 wecD_rffC TDP-D-fuco 99.5 2.3E-13 4.9E-18 125.6 14.8 137 18-183 43-186 (191)
11 PLN02706 glucosamine 6-phospha 99.5 5.4E-13 1.2E-17 117.5 16.0 136 17-182 5-144 (150)
12 TIGR02406 ectoine_EctA L-2,4-d 99.5 3.2E-13 6.8E-18 120.9 13.8 124 21-179 1-125 (157)
13 PF13523 Acetyltransf_8: Acety 99.5 3.1E-13 6.7E-18 119.4 13.5 145 21-187 1-146 (152)
14 TIGR03827 GNAT_ablB putative b 99.5 3.4E-13 7.4E-18 131.0 14.6 133 17-183 114-246 (266)
15 TIGR03448 mycothiol_MshD mycot 99.5 5.5E-12 1.2E-16 123.4 23.1 150 23-208 5-157 (292)
16 TIGR01575 rimI ribosomal-prote 99.5 4.8E-13 1E-17 113.7 13.6 118 29-184 1-118 (131)
17 KOG3139 N-acetyltransferase [G 99.5 1.7E-12 3.6E-17 114.2 15.6 95 68-187 56-151 (165)
18 COG0456 RimI Acetyltransferase 99.5 5.2E-13 1.1E-17 120.2 12.9 136 16-184 9-156 (177)
19 TIGR03103 trio_acet_GNAT GNAT- 99.5 1.3E-12 2.8E-17 138.9 17.0 138 17-185 81-220 (547)
20 PRK07922 N-acetylglutamate syn 99.4 1.6E-12 3.6E-17 117.8 14.4 123 17-182 4-127 (169)
21 KOG3216 Diamine acetyltransfer 99.4 2.7E-12 5.9E-17 111.7 14.9 137 18-182 3-146 (163)
22 PRK10975 TDP-fucosamine acetyl 99.4 1.9E-12 4.1E-17 119.6 14.6 138 18-184 46-190 (194)
23 COG3153 Predicted acetyltransf 99.4 2E-12 4.3E-17 116.7 14.2 132 19-186 4-135 (171)
24 PF13673 Acetyltransf_10: Acet 99.4 1.8E-12 3.9E-17 108.6 12.5 113 29-177 1-117 (117)
25 PRK07757 acetyltransferase; Pr 99.4 4.9E-12 1.1E-16 111.6 15.3 121 19-182 2-122 (152)
26 PF13420 Acetyltransf_4: Acety 99.4 4.4E-12 9.6E-17 111.9 14.6 137 21-185 1-142 (155)
27 PLN02825 amino-acid N-acetyltr 99.4 4.3E-12 9.3E-17 133.0 14.8 122 20-182 369-490 (515)
28 TIGR03448 mycothiol_MshD mycot 99.4 9.6E-12 2.1E-16 121.7 16.4 141 17-184 148-290 (292)
29 COG1247 Sortase and related ac 99.4 7.4E-12 1.6E-16 112.8 14.0 142 19-185 2-146 (169)
30 COG1246 ArgA N-acetylglutamate 99.4 6.2E-12 1.4E-16 110.5 11.2 119 20-182 2-123 (153)
31 PRK05279 N-acetylglutamate syn 99.3 1.3E-11 2.8E-16 128.3 13.8 124 19-183 295-418 (441)
32 PRK10514 putative acetyltransf 99.3 1.3E-11 2.8E-16 107.8 11.4 124 19-183 2-127 (145)
33 PRK10562 putative acetyltransf 99.3 5.2E-11 1.1E-15 104.5 13.8 122 21-182 2-125 (145)
34 PRK15130 spermidine N1-acetylt 99.3 4.5E-11 9.7E-16 109.2 13.9 139 16-183 4-146 (186)
35 PF13508 Acetyltransf_7: Acety 99.3 4.7E-11 1E-15 94.0 12.2 77 68-179 3-79 (79)
36 TIGR01890 N-Ac-Glu-synth amino 99.3 2.6E-11 5.5E-16 125.7 13.7 124 19-183 283-406 (429)
37 TIGR01686 FkbH FkbH-like domai 99.3 5.2E-11 1.1E-15 118.8 14.6 126 19-180 187-319 (320)
38 PRK10151 ribosomal-protein-L7/ 99.3 1.5E-10 3.3E-15 105.0 16.0 140 16-183 8-156 (179)
39 PRK10809 ribosomal-protein-S5- 99.3 1.6E-10 3.4E-15 106.4 16.3 141 16-183 15-167 (194)
40 PRK12308 bifunctional arginino 99.3 5.3E-11 1.1E-15 128.5 14.9 123 18-183 463-585 (614)
41 TIGR03585 PseH pseudaminic aci 99.3 5.7E-11 1.2E-15 104.8 11.7 134 21-183 3-139 (156)
42 PRK09831 putative acyltransfer 99.2 4.3E-11 9.3E-16 105.5 10.5 123 20-184 2-128 (147)
43 PHA01807 hypothetical protein 99.2 1.4E-10 3E-15 103.6 13.6 126 24-175 9-136 (153)
44 PRK10314 putative acyltransfer 99.2 8.3E-11 1.8E-15 105.0 11.6 126 21-183 9-135 (153)
45 KOG3235 Subunit of the major N 99.2 4.7E-11 1E-15 104.4 8.5 133 19-184 2-137 (193)
46 PF13302 Acetyltransf_3: Acety 99.1 3.9E-10 8.5E-15 97.4 11.4 132 19-178 2-142 (142)
47 KOG3396 Glucosamine-phosphate 99.1 8.4E-10 1.8E-14 94.4 11.8 133 18-181 6-143 (150)
48 PRK13688 hypothetical protein; 99.1 5.7E-10 1.2E-14 100.0 11.3 114 21-183 20-134 (156)
49 PF08445 FR47: FR47-like prote 99.0 3.5E-09 7.6E-14 85.4 11.3 61 120-182 22-82 (86)
50 cd02169 Citrate_lyase_ligase C 99.0 1.6E-09 3.4E-14 106.8 10.6 78 68-181 6-83 (297)
51 KOG3234 Acetyltransferase, (GN 99.0 1.8E-09 3.8E-14 94.6 8.7 133 20-187 3-136 (173)
52 KOG3138 Predicted N-acetyltran 98.9 4.7E-09 1E-13 96.0 7.6 140 19-187 17-157 (187)
53 KOG2488 Acetyltransferase (GNA 98.8 3.2E-08 6.8E-13 89.5 11.1 90 68-182 92-182 (202)
54 TIGR00124 cit_ly_ligase [citra 98.8 3.6E-08 7.8E-13 98.7 12.0 79 68-182 31-109 (332)
55 COG3393 Predicted acetyltransf 98.8 5.1E-08 1.1E-12 92.7 10.6 66 118-185 200-265 (268)
56 COG3981 Predicted acetyltransf 98.6 1.8E-07 3.9E-12 83.6 10.0 139 18-182 3-159 (174)
57 COG1670 RimL Acetyltransferase 98.5 2.3E-06 5.1E-11 76.5 14.6 62 121-183 97-159 (187)
58 KOG3397 Acetyltransferases [Ge 98.5 4E-07 8.7E-12 81.1 7.3 87 66-182 55-141 (225)
59 cd04301 NAT_SF N-Acyltransfera 98.4 1.7E-06 3.7E-11 62.5 8.9 63 71-158 2-64 (65)
60 PF12746 GNAT_acetyltran: GNAT 98.3 4.4E-06 9.5E-11 81.0 11.9 88 68-187 165-252 (265)
61 COG2153 ElaA Predicted acyltra 98.3 4.5E-06 9.7E-11 72.7 10.1 86 68-182 50-136 (155)
62 TIGR01211 ELP3 histone acetylt 98.3 3.7E-06 8E-11 88.9 11.7 52 127-182 465-516 (522)
63 PF13718 GNAT_acetyltr_2: GNAT 98.3 5.2E-06 1.1E-10 76.8 10.9 122 59-182 18-176 (196)
64 COG4552 Eis Predicted acetyltr 98.2 3.7E-06 8E-11 82.9 8.5 97 68-190 39-135 (389)
65 KOG4135 Predicted phosphogluco 98.2 2.5E-05 5.3E-10 68.2 12.3 162 1-186 1-174 (185)
66 KOG4144 Arylalkylamine N-acety 98.2 5.9E-07 1.3E-11 78.7 1.4 144 18-184 11-163 (190)
67 PF12568 DUF3749: Acetyltransf 98.1 0.00018 3.9E-09 61.8 14.2 84 68-181 38-124 (128)
68 PF08444 Gly_acyl_tr_C: Aralky 98.0 2.1E-05 4.6E-10 63.4 6.4 58 121-180 21-78 (89)
69 COG1444 Predicted P-loop ATPas 97.8 0.00014 2.9E-09 79.3 12.0 121 59-182 461-591 (758)
70 PF14542 Acetyltransf_CG: GCN5 97.8 0.0001 2.2E-09 58.3 8.3 38 118-155 21-58 (78)
71 COG3818 Predicted acetyltransf 97.7 0.00013 2.9E-09 62.4 6.8 141 19-185 8-151 (167)
72 PF13480 Acetyltransf_6: Acety 97.6 0.0013 2.8E-08 56.2 12.9 115 19-161 20-136 (142)
73 COG2388 Predicted acetyltransf 97.4 0.00051 1.1E-08 56.7 7.2 64 66-156 13-76 (99)
74 COG0454 WecD Histone acetyltra 97.4 0.0003 6.4E-09 55.2 4.8 44 125-177 87-130 (156)
75 COG3375 Uncharacterized conser 97.2 0.0031 6.8E-08 58.9 10.6 130 19-178 3-133 (266)
76 COG3053 CitC Citrate lyase syn 97.2 0.0051 1.1E-07 59.7 12.2 58 121-182 58-115 (352)
77 PRK10456 arginine succinyltran 96.7 0.013 2.9E-07 58.6 10.3 126 19-145 2-145 (344)
78 PF04958 AstA: Arginine N-succ 96.6 0.0041 9E-08 62.3 6.5 157 18-178 1-184 (342)
79 TIGR03694 exosort_acyl putativ 96.6 0.044 9.5E-07 52.7 13.1 153 19-179 8-195 (241)
80 PRK13834 putative autoinducer 96.3 0.07 1.5E-06 50.1 12.6 139 27-179 15-162 (207)
81 PF00765 Autoind_synth: Autoin 96.3 0.053 1.2E-06 49.8 11.3 137 27-181 7-154 (182)
82 PF01233 NMT: Myristoyl-CoA:pr 96.0 0.13 2.8E-06 46.0 11.9 63 76-158 87-149 (162)
83 COG5628 Predicted acetyltransf 96.0 0.079 1.7E-06 45.0 9.8 80 71-178 40-119 (143)
84 TIGR03827 GNAT_ablB putative b 96.0 0.15 3.2E-06 49.5 13.3 46 134-183 20-65 (266)
85 PF13880 Acetyltransf_13: ESCO 95.9 0.01 2.2E-07 45.8 3.7 30 119-148 5-34 (70)
86 TIGR03243 arg_catab_AOST argin 95.8 0.051 1.1E-06 54.3 9.3 124 21-145 2-143 (335)
87 TIGR03245 arg_AOST_alph argini 95.7 0.057 1.2E-06 54.0 9.3 124 21-145 2-144 (336)
88 TIGR03244 arg_catab_AstA argin 95.7 0.056 1.2E-06 54.1 9.1 123 21-144 2-142 (336)
89 PF06852 DUF1248: Protein of u 95.6 0.29 6.2E-06 45.0 12.6 106 77-206 56-166 (181)
90 PF05301 Mec-17: Touch recepto 94.9 0.2 4.3E-06 42.7 8.7 53 118-174 45-97 (120)
91 PRK14852 hypothetical protein; 94.6 0.42 9.1E-06 54.3 12.7 158 17-186 27-185 (989)
92 COG3882 FkbH Predicted enzyme 94.2 0.15 3.2E-06 53.0 7.5 130 19-182 414-550 (574)
93 COG1243 ELP3 Histone acetyltra 93.8 0.08 1.7E-06 54.7 4.7 61 116-182 449-509 (515)
94 TIGR03019 pepcterm_femAB FemAB 93.8 1.9 4.1E-05 43.1 14.6 134 18-186 151-285 (330)
95 COG3138 AstA Arginine/ornithin 93.6 0.2 4.2E-06 48.7 6.6 122 19-142 2-142 (336)
96 KOG2036 Predicted P-loop ATPas 93.1 0.2 4.3E-06 54.2 6.4 34 119-152 614-647 (1011)
97 PF13444 Acetyltransf_5: Acety 91.7 0.63 1.4E-05 38.3 6.5 66 71-141 33-100 (101)
98 KOG3698 Hyaluronoglucosaminida 91.2 0.68 1.5E-05 49.0 7.5 165 18-184 679-880 (891)
99 cd04264 DUF619-NAGS DUF619 dom 88.7 2.4 5.3E-05 35.0 7.5 44 118-166 33-76 (99)
100 KOG2535 RNA polymerase II elon 87.0 0.96 2.1E-05 45.2 4.8 49 130-182 498-547 (554)
101 PRK10975 TDP-fucosamine acetyl 86.8 7.8 0.00017 35.3 10.7 61 152-217 3-63 (194)
102 COG2401 ABC-type ATPase fused 85.8 0.39 8.5E-06 49.4 1.5 67 116-182 238-308 (593)
103 COG3916 LasI N-acyl-L-homoseri 85.1 14 0.0003 34.6 11.2 104 68-181 52-162 (209)
104 KOG4601 Uncharacterized conser 85.0 3 6.5E-05 39.5 6.8 53 118-174 107-159 (264)
105 PF09390 DUF1999: Protein of u 83.8 14 0.0003 32.6 9.8 133 19-181 1-140 (161)
106 PLN03238 probable histone acet 82.8 3.5 7.6E-05 40.4 6.5 32 122-153 158-189 (290)
107 cd04265 DUF619-NAGS-U DUF619 d 82.2 6.8 0.00015 32.4 7.2 44 118-166 33-76 (99)
108 PF01853 MOZ_SAS: MOZ/SAS fami 82.2 6.4 0.00014 36.3 7.6 33 121-153 82-114 (188)
109 PF04768 DUF619: Protein of un 81.0 16 0.00034 33.3 9.8 110 29-179 33-143 (170)
110 KOG2779 N-myristoyl transferas 80.3 11 0.00024 38.0 9.1 59 75-153 143-201 (421)
111 KOG3014 Protein involved in es 77.5 14 0.00031 35.4 8.6 33 117-149 181-213 (257)
112 PTZ00064 histone acetyltransfe 77.3 5.8 0.00013 41.7 6.4 32 122-153 387-418 (552)
113 PF02799 NMT_C: Myristoyl-CoA: 77.3 54 0.0012 30.4 12.1 131 21-181 31-164 (190)
114 PLN03239 histone acetyltransfe 76.5 6.8 0.00015 39.5 6.4 32 122-153 216-247 (351)
115 PF04377 ATE_C: Arginine-tRNA- 73.3 24 0.00051 30.6 8.2 41 126-166 69-109 (128)
116 PLN00104 MYST -like histone ac 72.8 5.7 0.00012 41.5 5.0 32 122-153 309-340 (450)
117 PRK01305 arginyl-tRNA-protein 68.1 47 0.001 31.9 9.8 54 125-185 173-226 (240)
118 PF09924 DUF2156: Uncharacteri 65.6 66 0.0014 31.4 10.8 108 19-159 133-245 (299)
119 PF13880 Acetyltransf_13: ESCO 64.5 3.9 8.4E-05 31.6 1.4 24 279-305 7-30 (70)
120 PHA01733 hypothetical protein 61.2 29 0.00063 30.9 6.4 46 136-182 86-132 (153)
121 PF04339 DUF482: Protein of un 60.8 1.1E+02 0.0024 31.3 11.5 127 18-184 199-331 (370)
122 PHA00432 internal virion prote 54.5 39 0.00085 29.6 6.0 29 153-182 93-121 (137)
123 KOG2747 Histone acetyltransfer 52.3 25 0.00055 36.1 5.2 32 122-153 263-294 (396)
124 TIGR02382 wecD_rffC TDP-D-fuco 50.7 66 0.0014 29.0 7.4 55 162-218 7-61 (191)
125 PF02474 NodA: Nodulation prot 50.4 23 0.00051 32.2 4.1 54 118-176 84-137 (196)
126 PHA02769 hypothetical protein; 45.6 18 0.00039 30.6 2.4 52 137-191 94-148 (154)
127 COG5092 NMT1 N-myristoyl trans 39.0 89 0.0019 31.2 6.4 112 19-154 82-200 (451)
128 KOG2779 N-myristoyl transferas 38.8 2.6E+02 0.0056 28.6 9.7 133 21-183 263-398 (421)
129 COG5027 SAS2 Histone acetyltra 38.6 23 0.00049 35.7 2.3 27 122-148 265-291 (395)
130 PF07395 Mig-14: Mig-14; Inte 38.2 88 0.0019 30.5 6.2 110 21-157 129-242 (264)
131 PF10102 DUF2341: Domain of un 37.6 24 0.00051 28.5 2.0 25 303-329 28-52 (89)
132 PF04339 DUF482: Protein of un 34.9 2.7E+02 0.0059 28.6 9.5 103 70-182 46-160 (370)
133 COG3473 Maleate cis-trans isom 29.4 1.2E+02 0.0027 28.6 5.4 86 145-247 110-198 (238)
134 COG2898 Uncharacterized conser 29.4 4.7E+02 0.01 28.3 10.5 61 71-158 396-456 (538)
135 PRK02983 lysS lysyl-tRNA synth 28.6 4.8E+02 0.01 30.8 11.3 63 70-160 422-485 (1094)
136 PRK15312 antimicrobial resista 27.5 1.8E+02 0.0038 28.9 6.4 109 21-156 157-271 (298)
137 COG2935 Putative arginyl-tRNA: 26.6 2.5E+02 0.0054 27.2 7.0 52 125-183 180-231 (253)
138 KOG2696 Histone acetyltransfer 26.4 91 0.002 31.9 4.3 47 119-166 217-263 (403)
139 PF12261 T_hemolysin: Thermost 26.2 1.1E+02 0.0023 28.2 4.4 58 116-181 84-141 (179)
140 PRK00756 acyltransferase NodA; 26.1 2.1E+02 0.0046 26.1 6.1 43 118-161 84-126 (196)
141 COG5630 ARG2 Acetylglutamate s 26.1 1.4E+02 0.003 30.8 5.5 32 118-149 399-431 (495)
142 COG5653 Protein involved in ce 25.0 7.9E+02 0.017 25.5 11.5 69 67-163 271-339 (406)
143 PF11124 Pho86: Inorganic phos 21.6 6.6E+02 0.014 25.1 9.1 86 75-182 176-271 (304)
144 TIGR02852 spore_dpaB dipicolin 21.1 83 0.0018 29.0 2.7 30 342-371 128-158 (187)
145 PF04444 Dioxygenase_N: Catech 20.5 87 0.0019 24.4 2.3 22 334-355 2-23 (74)
146 cd04266 DUF619-NAGS-FABP DUF61 20.2 2.5E+02 0.0055 23.5 5.2 45 118-166 38-83 (108)
No 1
>PRK10146 aminoalkylphosphonic acid N-acetyltransferase; Provisional
Probab=99.67 E-value=8.1e-16 Score=134.06 Aligned_cols=137 Identities=20% Similarity=0.172 Sum_probs=101.2
Q ss_pred ccEEEEECCCcCcHHHHHHHHHHHccCCCCCcchhhhhccChhhhhhcCCCcEEEEEEECCeEEEEEEeEeeecccCccc
Q 014721 17 RNIVVREFDPNKDCLGVEDVERRCEVGPSGKLCLFTDLLGDPICRVRHSPAFLMLVAEVGDEIVGMIRGCIKTVTCGKRI 96 (419)
Q Consensus 17 ~~l~IR~~~~~~Dl~~I~eL~~~~e~~~~g~~~l~~~~~~d~i~ri~~~p~~~~lVAe~dgeiVG~i~~~~~~~~~g~~~ 96 (419)
.++.||+++ ++|++.+.++.............. .+.+......+...++|++.+|++||++........
T Consensus 2 ~~~~ir~a~-~~D~~~l~~l~~~~~~~~~~~~~~-----~~~~~~~l~~~~~~~~v~~~~~~ivG~~~~~~~~~~----- 70 (144)
T PRK10146 2 PACELRPAT-QYDTDAVYALICELKQAEFDHQAF-----RVGFNANLRDPNMRYHLALLDGEVVGMIGLHLQFHL----- 70 (144)
T ss_pred CccEEeeCc-HhhHHHHHHHHHHHhcccCCHHHH-----HHHHHHHhcCCCceEEEEEECCEEEEEEEEEecccc-----
Confidence 356799999 999999999987654322211111 111222222344567888889999999977643210
Q ss_pred ccccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChHHHHHHHHhCC
Q 014721 97 SRNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYASVKLFTDKCG 176 (419)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~lFY~K~G 176 (419)
......++|..+.|+|+|||+|||+.|++++++++++.|++.+.+.+...|.+|++ ||+|+|
T Consensus 71 -----------------~~~~~~~~i~~l~v~p~~rg~GiG~~Ll~~~~~~a~~~~~~~i~l~~~~~n~~a~~-fY~~~G 132 (144)
T PRK10146 71 -----------------HHVNWIGEIQELVVMPQARGLNVGSKLLAWAEEEARQAGAEMTELSTNVKRHDAHR-FYLREG 132 (144)
T ss_pred -----------------cccchhheeheeEECHHHcCCCHHHHHHHHHHHHHHHcCCcEEEEecCCCchHHHH-HHHHcC
Confidence 00112457888999999999999999999999999999999999999999999999 699999
Q ss_pred CEEeee
Q 014721 177 YSKFRT 182 (419)
Q Consensus 177 F~~~~~ 182 (419)
|+..+.
T Consensus 133 f~~~~~ 138 (144)
T PRK10146 133 YEQSHF 138 (144)
T ss_pred Cchhhh
Confidence 987644
No 2
>PF13527 Acetyltransf_9: Acetyltransferase (GNAT) domain; PDB: 3SXN_C 2I00_D 1M4D_B 1M44_A 1M4G_B 1M4I_A 2OZG_A 2HV2_F 3N7Z_A 3RYO_B ....
Probab=99.60 E-value=1.5e-14 Score=123.66 Aligned_cols=127 Identities=20% Similarity=0.242 Sum_probs=92.3
Q ss_pred EEEECCCcCcHHHHHHHHHHHccCCCCCcchhhhhccChhhhhhcCCCcEEEEEEECCeEEEEEEeEeeecccCcccccc
Q 014721 20 VVREFDPNKDCLGVEDVERRCEVGPSGKLCLFTDLLGDPICRVRHSPAFLMLVAEVGDEIVGMIRGCIKTVTCGKRISRN 99 (419)
Q Consensus 20 ~IR~~~~~~Dl~~I~eL~~~~e~~~~g~~~l~~~~~~d~i~ri~~~p~~~~lVAe~dgeiVG~i~~~~~~~~~g~~~~~~ 99 (419)
.||+++ ++|.+++.+|++.++........ ...... ... .....++++++|+|||++.........+
T Consensus 1 ~iR~~~-~~d~~~i~~l~~~~F~~~~~~~~-~~~~~~-----~~~-~~~~~~~~~~~~~ivg~~~~~~~~~~~~------ 66 (127)
T PF13527_consen 1 EIRPLT-ESDFEQIIELFNEAFGDSESPPE-IWEYFR-----NLY-GPGRCVVAEDDGKIVGHVGLIPRRLSVG------ 66 (127)
T ss_dssp -EEEE--GGGHHHHHHHHHHHTTT-CHHHH-HHHHHH-----HHH-HTTEEEEEEETTEEEEEEEEEEEEEEET------
T ss_pred CceECC-HHHHHHHHHHHHHHCCCCCCchh-hhhhhh-----ccc-CcCcEEEEEECCEEEEEEEEEEEEEEEC------
Confidence 389999 99999999999999876553220 000100 011 1246889999999999998887764322
Q ss_pred cccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChHHHHHHHHhCCCEE
Q 014721 100 TKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYASVKLFTDKCGYSK 179 (419)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~lFY~K~GF~~ 179 (419)
+...+.++|..++|+|+|||+|+|++|++++++.++++|+..+++.. .+.+ ||+|+||+.
T Consensus 67 --------------g~~~~~~~i~~v~v~p~~R~~Gl~~~L~~~~~~~~~~~g~~~~~l~~--~~~~----~Y~~~G~~~ 126 (127)
T PF13527_consen 67 --------------GKKFKAAYIGDVAVDPEYRGRGLGRQLMRALLERARERGVPFIFLFP--SSPP----FYRRFGFEY 126 (127)
T ss_dssp --------------TEEEEEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHHHTT-SEEEEE---SSHH----HHHHTTEEE
T ss_pred --------------CEEEEEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCCCEEEEec--CChh----hhhcCCCEE
Confidence 22347899999999999999999999999999999999999887765 3344 899999986
Q ss_pred e
Q 014721 180 F 180 (419)
Q Consensus 180 ~ 180 (419)
+
T Consensus 127 ~ 127 (127)
T PF13527_consen 127 A 127 (127)
T ss_dssp E
T ss_pred C
Confidence 4
No 3
>PRK01346 hypothetical protein; Provisional
Probab=99.59 E-value=7.1e-13 Score=136.31 Aligned_cols=177 Identities=19% Similarity=0.118 Sum_probs=116.2
Q ss_pred cEEEEECCCcCcHHHHHHHHHHHccCCCCCcchhhhhccChhhhhhcCCCcEEEEEEECCeEEEEEEeEeeecccCcccc
Q 014721 18 NIVVREFDPNKDCLGVEDVERRCEVGPSGKLCLFTDLLGDPICRVRHSPAFLMLVAEVGDEIVGMIRGCIKTVTCGKRIS 97 (419)
Q Consensus 18 ~l~IR~~~~~~Dl~~I~eL~~~~e~~~~g~~~l~~~~~~d~i~ri~~~p~~~~lVAe~dgeiVG~i~~~~~~~~~g~~~~ 97 (419)
.+.||+++ .+|++++.+|...++........ .... . . ..+....++++++|++||++..........
T Consensus 6 ~~~iR~~~-~~D~~~i~~L~~~~f~~~~~~~~-~~~~----~-~--~~~~~~~~va~~~~~lvg~~~~~~~~~~~~---- 72 (411)
T PRK01346 6 AITIRTAT-EEDWPAWFRAAATGFGDSPSDEE-LEAW----R-A--LVEPDRTLGAFDGDEVVGTAGAFDLRLTVP---- 72 (411)
T ss_pred CceeecCC-HHHHHHHHHHHHHHcCCCCChHH-HHHH----H-H--hcCcCCeEEEEECCEEEEEEEEeccccccC----
Confidence 36799999 99999999999999765431111 1111 1 1 112244788888999999987654432110
Q ss_pred cccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChHHHHHHHHhCCC
Q 014721 98 RNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYASVKLFTDKCGY 177 (419)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~lFY~K~GF 177 (419)
.+...+.++|..++|+|+|||+|||++|++++++.++++|+..+.|.+.. . . ||+|+||
T Consensus 73 ---------------~~~~~~~~~i~~v~V~P~~RgrGig~~Ll~~~l~~a~~~g~~~~~L~~~~--~---~-~Y~r~Gf 131 (411)
T PRK01346 73 ---------------GGAVLPAAGVTAVTVAPTHRRRGLLTALMREQLRRIRERGEPVAALTASE--G---G-IYGRFGY 131 (411)
T ss_pred ---------------CCCccceeEEEEEEEChhhcCCCHHHHHHHHHHHHHHHCCCcEEEEECCc--h---h-hHhhCCC
Confidence 01123678999999999999999999999999999999999888776433 2 2 7999999
Q ss_pred EEeeeceeeeccccc--ccccCCcceeeeecCh----hhHHHHHHHhcCC-CCCCCcC
Q 014721 178 SKFRTPSILVNPVFA--HRLIVPKQVTIIQLNP----SDAEAFYRRKFST-TEFFPRD 228 (419)
Q Consensus 178 ~~~~~~~~~~~pv~~--~~~~~~~~v~i~~l~~----~~a~~ly~~~~~~-~ef~P~d 228 (419)
+..+....+..+... .....+....+...++ +....+|++.+.. ....+++
T Consensus 132 ~~~~~~~~~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~y~~~~~~~~G~~~R~ 189 (411)
T PRK01346 132 GPATYSQSLSVDRRRARLRPDVPDGGRVRLVDPAEARDLLPAVYERWRRARPGALSRP 189 (411)
T ss_pred eeccceEEEEEcccccccCCCCCCCCceEEcCHHHHHHHHHHHHHHhhccCCCcccCC
Confidence 999887777644331 1111111122333333 3345678776653 3344444
No 4
>PRK03624 putative acetyltransferase; Provisional
Probab=99.59 E-value=3.3e-14 Score=122.13 Aligned_cols=127 Identities=29% Similarity=0.384 Sum_probs=96.7
Q ss_pred EEEEECCCcCcHHHHHHHHHHHccCC-CCCcchhhhhccChhhhhhcCCCcEEEEEEECCeEEEEEEeEeeecccCcccc
Q 014721 19 IVVREFDPNKDCLGVEDVERRCEVGP-SGKLCLFTDLLGDPICRVRHSPAFLMLVAEVGDEIVGMIRGCIKTVTCGKRIS 97 (419)
Q Consensus 19 l~IR~~~~~~Dl~~I~eL~~~~e~~~-~g~~~l~~~~~~d~i~ri~~~p~~~~lVAe~dgeiVG~i~~~~~~~~~g~~~~ 97 (419)
+.||+++ ++|.+.+.+++..+.... +.... .. +......+...++++..++++||++......
T Consensus 3 ~~ir~~~-~~d~~~i~~l~~~~~~~~~~~~~~------~~-~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~-------- 66 (140)
T PRK03624 3 MEIRVFR-QADFEAVIALWERCDLTRPWNDPE------MD-IERKLNHDPSLFLVAEVGGEVVGTVMGGYDG-------- 66 (140)
T ss_pred eEEEEcc-cccHHHHHHHHHhcCCCcchhhHH------HH-HHHHhcCCCceEEEEEcCCcEEEEEEeeccC--------
Confidence 6699999 999999999988873211 11000 01 1112223345678888889999998543211
Q ss_pred cccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChHHHHHHHHhCCC
Q 014721 98 RNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYASVKLFTDKCGY 177 (419)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~lFY~K~GF 177 (419)
..+++..+.|+|+|||+|+|++|++.+++++++.|++.+.+.+..+|.+|+++ |+|+||
T Consensus 67 --------------------~~~~i~~i~v~p~~rg~Gig~~ll~~~~~~~~~~~~~~~~~~~~~~N~~~~~~-y~k~GF 125 (140)
T PRK03624 67 --------------------HRGWAYYLAVHPDFRGRGIGRALVARLEKKLIARGCPKINLQVREDNDAVLGF-YEALGY 125 (140)
T ss_pred --------------------CCceEEEEEECHHHhCCCHHHHHHHHHHHHHHHCCCCEEEEEEecCcHHHHHH-HHHcCC
Confidence 22466788999999999999999999999999999999999999999999995 999999
Q ss_pred EEeee
Q 014721 178 SKFRT 182 (419)
Q Consensus 178 ~~~~~ 182 (419)
+...+
T Consensus 126 ~~~~~ 130 (140)
T PRK03624 126 EEQDR 130 (140)
T ss_pred ccccE
Confidence 97665
No 5
>PTZ00330 acetyltransferase; Provisional
Probab=99.56 E-value=1.4e-13 Score=120.29 Aligned_cols=135 Identities=21% Similarity=0.224 Sum_probs=93.3
Q ss_pred cEEEEECCCcCcHHHHHHHHHHHccCCCCCcchhhhhccChhhhhh-cCCCcEEEEEEECCeEEEEEEeEeeecccCccc
Q 014721 18 NIVVREFDPNKDCLGVEDVERRCEVGPSGKLCLFTDLLGDPICRVR-HSPAFLMLVAEVGDEIVGMIRGCIKTVTCGKRI 96 (419)
Q Consensus 18 ~l~IR~~~~~~Dl~~I~eL~~~~e~~~~g~~~l~~~~~~d~i~ri~-~~p~~~~lVAe~dgeiVG~i~~~~~~~~~g~~~ 96 (419)
.+.||+++ ++|.+.+.++.+.....+. ...+.......... ......+++++.+|++||++.+...... .
T Consensus 6 ~~~ir~~~-~~D~~~i~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~--~-- 76 (147)
T PTZ00330 6 SLELRDLE-EGDLGSVLELLSHLTSAPA----LSQEELEQIAARRRLAGVVTRVFVHSPTQRIVGTASLFVEPKF--T-- 76 (147)
T ss_pred eEEEEEcc-cccHHHHHHHHHHhcCCCc----cchhHHHHHHHHHhcCCCceEEEEEeCCCEEEEEEEEEecccc--c--
Confidence 47899999 9999999999877632221 11111111011111 1111345666778999999977643210 0
Q ss_pred ccccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChHHHHHHHHhCC
Q 014721 97 SRNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYASVKLFTDKCG 176 (419)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~lFY~K~G 176 (419)
......++|..+.|+|+|||+|||++|++++++++++.|+..+.+.+ |.+|++ ||+|+|
T Consensus 77 -----------------~~~~~~~~i~~~~V~~~~rg~Gig~~l~~~~~~~a~~~~~~~l~l~~---n~~a~~-~y~k~G 135 (147)
T PTZ00330 77 -----------------RGGKCVGHIEDVVVDPSYRGQGLGRALISDLCEIARSSGCYKVILDC---TEDMVA-FYKKLG 135 (147)
T ss_pred -----------------cCCCceEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEec---ChHHHH-HHHHCC
Confidence 00113578999999999999999999999999999999988776654 788888 599999
Q ss_pred CEEeee
Q 014721 177 YSKFRT 182 (419)
Q Consensus 177 F~~~~~ 182 (419)
|+....
T Consensus 136 F~~~~~ 141 (147)
T PTZ00330 136 FRACER 141 (147)
T ss_pred CEEece
Confidence 998775
No 6
>PRK10140 putative acetyltransferase YhhY; Provisional
Probab=99.56 E-value=1.1e-13 Score=122.65 Aligned_cols=138 Identities=20% Similarity=0.233 Sum_probs=98.3
Q ss_pred cEEEEECCCcCcHHHHHHHHHHHccCCC--CCcchhhhhccChhhhhhcCCCcEEEEEEECCeEEEEEEeEeeecccCcc
Q 014721 18 NIVVREFDPNKDCLGVEDVERRCEVGPS--GKLCLFTDLLGDPICRVRHSPAFLMLVAEVGDEIVGMIRGCIKTVTCGKR 95 (419)
Q Consensus 18 ~l~IR~~~~~~Dl~~I~eL~~~~e~~~~--g~~~l~~~~~~d~i~ri~~~p~~~~lVAe~dgeiVG~i~~~~~~~~~g~~ 95 (419)
.+.||+++ .+|++.+.++......... .......+. ....+...+....++++++|++||++........
T Consensus 3 ~i~lr~~~-~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~v~~~~~~~vG~~~~~~~~~~---- 74 (162)
T PRK10140 3 EIVIRHAE-TRDYEAIRQIHAQPEVYHNTLQVPHPSDHM---WQERLADRPGIKQLVACIDGDVVGHLTIDVQQRP---- 74 (162)
T ss_pred ccEEEecc-hhhHHHHHHHHhCcccccccccCCCcCHHH---HHHHhhcCCCcEEEEEEECCEEEEEEEEeccccc----
Confidence 47799999 9999999998765422111 000011111 1222223333456788889999999977643211
Q ss_pred cccccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHH-cCCcEEEEEEccCChHHHHHHHHh
Q 014721 96 ISRNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRE-SGVEYSYIATENDNYASVKLFTDK 174 (419)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~-~G~~~i~l~t~~~N~~s~~lFY~K 174 (419)
.....+. .++.|+|+|||+|||+.|++.+++++++ .|...+.+.+..+|.+|++ ||+|
T Consensus 75 -------------------~~~~~~~-~~~~v~p~~rg~Gig~~ll~~l~~~~~~~~~~~~i~l~v~~~N~~a~~-~y~k 133 (162)
T PRK10140 75 -------------------RRSHVAD-FGICVDSRWKNRGVASALMREMIEMCDNWLRVDRIELTVFVDNAPAIK-VYKK 133 (162)
T ss_pred -------------------ccceEEE-EEEEECHHHcCCCHHHHHHHHHHHHHHhhCCccEEEEEEEcCCHHHHH-HHHH
Confidence 1112223 4689999999999999999999999988 6999999999999999999 5999
Q ss_pred CCCEEeeece
Q 014721 175 CGYSKFRTPS 184 (419)
Q Consensus 175 ~GF~~~~~~~ 184 (419)
+||+..+...
T Consensus 134 ~GF~~~g~~~ 143 (162)
T PRK10140 134 YGFEIEGTGK 143 (162)
T ss_pred CCCEEEeecc
Confidence 9999988743
No 7
>PRK09491 rimI ribosomal-protein-alanine N-acetyltransferase; Provisional
Probab=99.55 E-value=1.3e-13 Score=120.99 Aligned_cols=125 Identities=15% Similarity=0.268 Sum_probs=94.9
Q ss_pred EEEEECCCcCcHHHHHHHHHHHccCCCCCcchhhhhccChhhhhhcCCCcEEEEEEECCeEEEEEEeEeeecccCccccc
Q 014721 19 IVVREFDPNKDCLGVEDVERRCEVGPSGKLCLFTDLLGDPICRVRHSPAFLMLVAEVGDEIVGMIRGCIKTVTCGKRISR 98 (419)
Q Consensus 19 l~IR~~~~~~Dl~~I~eL~~~~e~~~~g~~~l~~~~~~d~i~ri~~~p~~~~lVAe~dgeiVG~i~~~~~~~~~g~~~~~ 98 (419)
++||+++ ++|++.+.++.......++....+. +. ..+....++++.+|++||++......
T Consensus 2 ~~iR~~~-~~D~~~l~~l~~~~~~~~~~~~~~~---------~~-~~~~~~~~~~~~~~~~vG~~~~~~~~--------- 61 (146)
T PRK09491 2 NTISSLT-PADLPAAYHIEQRAHAFPWSEKTFA---------SN-QGERYLNLKLTVNGQMAAFAITQVVL--------- 61 (146)
T ss_pred cchhcCC-hhhhHHHHHHHHhcCCCCCCHHHHH---------HH-HhcCceEEEEEECCeEEEEEEEEeec---------
Confidence 4599999 9999999999776654444322111 11 11222234556789999998653211
Q ss_pred ccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChHHHHHHHHhCCCE
Q 014721 99 NTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYASVKLFTDKCGYS 178 (419)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~lFY~K~GF~ 178 (419)
..+.+..++|+|+|||+|||+.|++.+++.+++.|+..+.+.+...|.+|.+ ||+|+||+
T Consensus 62 -------------------~~~~~~~i~v~~~~rg~G~g~~ll~~~~~~~~~~~~~~~~~~~~~~N~~a~~-~y~k~Gf~ 121 (146)
T PRK09491 62 -------------------DEATLFNIAVDPDYQRQGLGRALLEHLIDELEKRGVATLWLEVRASNAAAIA-LYESLGFN 121 (146)
T ss_pred -------------------CceEEEEEEECHHHccCCHHHHHHHHHHHHHHHCCCcEEEEEEccCCHHHHH-HHHHcCCE
Confidence 2345678899999999999999999999999999999999999999999999 59999999
Q ss_pred Eeeec
Q 014721 179 KFRTP 183 (419)
Q Consensus 179 ~~~~~ 183 (419)
..+..
T Consensus 122 ~~~~~ 126 (146)
T PRK09491 122 EVTIR 126 (146)
T ss_pred Eeeee
Confidence 87764
No 8
>PHA00673 acetyltransferase domain containing protein
Probab=99.53 E-value=1.5e-13 Score=121.99 Aligned_cols=133 Identities=16% Similarity=0.135 Sum_probs=99.7
Q ss_pred ECCCcCcHHHHHHHHHHHccCCCCCcchhh--hhccChhhhhhcCCCcEEEEEEECCeEEEEEEeEeeecccCccccccc
Q 014721 23 EFDPNKDCLGVEDVERRCEVGPSGKLCLFT--DLLGDPICRVRHSPAFLMLVAEVGDEIVGMIRGCIKTVTCGKRISRNT 100 (419)
Q Consensus 23 ~~~~~~Dl~~I~eL~~~~e~~~~g~~~l~~--~~~~d~i~ri~~~p~~~~lVAe~dgeiVG~i~~~~~~~~~g~~~~~~~ 100 (419)
-++ .+|+++|.+|..+- ........... .+... +.++...|...++|++++|++||++...+.+...
T Consensus 11 ~A~-~~D~paI~~LLadd-~l~~~r~d~~~~~~y~~a-f~ai~~dp~~~llVa~~~g~vVG~~~l~~~p~l~-------- 79 (154)
T PHA00673 11 FAE-LADAPTFASLCAEY-AHESANADLAGRAPDHHA-YAGMEAAGVAHFLGVFRGEELVGFACLLVTPVPH-------- 79 (154)
T ss_pred hcc-HhhHHHHHHHHHhc-ccccccccccccchhHHH-HHHHHhCCCcEEEEEEECCEEEEEEEEEEecCCc--------
Confidence 467 89999999998773 22222111111 11111 5677778888899999999999999888776311
Q ss_pred ccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEE-ccCChHHHHHHHHhCCCEE
Q 014721 101 KYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIAT-ENDNYASVKLFTDKCGYSK 179 (419)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t-~~~N~~s~~lFY~K~GF~~ 179 (419)
-...+.+.|..|+|+|++||+|||++|+++++++++++|+..+++.. ...|+. . ||.+.|++.
T Consensus 80 -------------~~~~~~~~Ie~l~V~~~~RGqGIG~~Ll~~A~~~Ar~~Gc~~lyis~~p~~~tv--~-fy~~~g~~~ 143 (154)
T PHA00673 80 -------------FKGQLIGTTESIFVAAAHRPGGAGMALLRATEALARDLGATGLYVSGPTEGRLV--Q-LLPAAGYRE 143 (154)
T ss_pred -------------cCCccEEEEEEEEEChhccCCCHHHHHHHHHHHHHHHCCCCEEEEecCCCccch--H-HHHhCCchh
Confidence 11236789999999999999999999999999999999999999974 444554 4 899999987
Q ss_pred eee
Q 014721 180 FRT 182 (419)
Q Consensus 180 ~~~ 182 (419)
..+
T Consensus 144 ~~~ 146 (154)
T PHA00673 144 TNR 146 (154)
T ss_pred hch
Confidence 654
No 9
>PF00583 Acetyltransf_1: Acetyltransferase (GNAT) family; InterPro: IPR000182 The N-acetyltransferases (NAT) (EC 2.3.1.-) are enzymes that use acetyl coenzyme A (CoA) to transfer an acetyl group to a substrate, a reaction implicated in various functions from bacterial antibiotic resistance to mammalian circadian rhythm and chromatin remodeling. The Gcn5-related N-acetyltransferases (GNAT) catalyze the transfer of the acetyl from the CoA donor to a primary amine of the acceptor. The GNAT proteins share a domain composed of four conserved sequence motifs A-D [, ]. This GNAT domain is named after yeast GCN5 (from General Control Nonrepressed) and related histone acetyltransferases (HATs) like Hat1 and PCAF. HATs acetylate lysine residues of amino terminal histone tails, resulting in transcription activation. Another category of GNAT, the aminoglycoside N-acetyltransferases, confer antibiotic resistance by catalyzing the acetylation of amino groups in aminoglycoside antibiotics []. GNAT proteins can also have anabolic and catabolic functions in both prokaryotes and eukaryotes [, , , , ]. The acetyltransferase/GNAT domain forms a structurally conserved fold of 6 to 7 beta strands (B) and 4 helices (H) in the topology B1-H1-H2-B2-B3-B4-H3-B5-H4-B6, followed by a C-terminal strand which may be from the same monomer or contributed by another [, ]. Motifs D (B2-B3), A (B4-H3) and B (B5-H4) are collectively called the HAT core [, , ], while the N-terminal motif C (B1-H1) is less conserved. Some proteins known to contain a GNAT domain: Yeast GCN5 and Hat1, which are histone acetyltransferases (EC 2.3.1.48). Human PCAF, a histone acetyltransferase. Mammalian serotonin N-acetyltransferase (SNAT) or arylalkylamine NAT (AANAT), which acetylates serotonin into a circadian neurohormone that may participate in light-dark rhythms, and human mood and behavior. Mammalian glucosamine 6-phosphate N-acetyltransferase (GNA1) (EC 2.3.1.4). Escherichia coli rimI and rimJ, which acetylate the N-terminal alanine of ribosomal proteins S18 and S5, respectively (EC 2.3.1.128). Mycobacterium tuberculosis aminoglycoside 2'-N-acetyltransferase (aac), which acetylates the 2' hydroxyl or amino group of a broad spectrum of aminoglycoside antibiotics. Bacillus subtilis bltD and paiA, which acetylate spermine and spermidine. This entry represents the entire GNAT domain.; GO: 0008080 N-acetyltransferase activity, 0008152 metabolic process; PDB: 3T9Y_A 2R7H_B 2OZH_A 1Y9W_B 1VKC_B 2OH1_C 3R9E_B 3R9G_B 3R9F_A 3R96_A ....
Probab=99.52 E-value=1.9e-13 Score=107.67 Aligned_cols=83 Identities=35% Similarity=0.502 Sum_probs=74.3
Q ss_pred EEECCeEEEEEEeEeeecccCcccccccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcC
Q 014721 73 AEVGDEIVGMIRGCIKTVTCGKRISRNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESG 152 (419)
Q Consensus 73 Ae~dgeiVG~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G 152 (419)
|+++|++||++.+....... .....++|..++|+|+|||+|||+.|++++++++++.|
T Consensus 1 ~~~~~~ivg~~~~~~~~~~~----------------------~~~~~~~i~~~~v~~~~r~~Gig~~L~~~~~~~~~~~g 58 (83)
T PF00583_consen 1 AEEDGQIVGFASLRPPPEPF----------------------DHGNHAYIHRLAVDPEYRGQGIGSKLLQAAEEWARKRG 58 (83)
T ss_dssp EEETTEEEEEEEEEEEETTT----------------------TTTTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTT
T ss_pred CcCCCEEEEEEEEEECCCcc----------------------ccCCEEEEEEEEEcHHHhhCCCchhhhhhhhhhHHhcC
Confidence 57899999999888776321 01478999999999999999999999999999999999
Q ss_pred CcEEEEEEccCChHHHHHHHHhCCCE
Q 014721 153 VEYSYIATENDNYASVKLFTDKCGYS 178 (419)
Q Consensus 153 ~~~i~l~t~~~N~~s~~lFY~K~GF~ 178 (419)
+..+.+.+..+|.++++ ||+|+||+
T Consensus 59 ~~~i~~~~~~~n~~~~~-~~~k~Gf~ 83 (83)
T PF00583_consen 59 IKRIYLDVSPDNPAARR-FYEKLGFE 83 (83)
T ss_dssp ESEEEEEEETTGHHHHH-HHHHTTEE
T ss_pred ccEEEEEEeCCCHHHHH-HHHHcCCC
Confidence 99999999999999999 59999996
No 10
>TIGR02382 wecD_rffC TDP-D-fucosamine acetyltransferase. This model represents the WecD protein (Formerly RffC) for the biosynthesis of enterobacterial common antigen (ECA), an outer leaflet, outer membrane glycolipid with a trisaccharide repeat unit. WecD is a member of the GNAT family of acetytransferases (pfam00583).
Probab=99.52 E-value=2.3e-13 Score=125.58 Aligned_cols=137 Identities=15% Similarity=0.074 Sum_probs=97.4
Q ss_pred cEEEEECCCcCcHHHHHHHHHHHccCC-----CCCcchhhhhccChhhhhh-cCCCcE-EEEEEECCeEEEEEEeEeeec
Q 014721 18 NIVVREFDPNKDCLGVEDVERRCEVGP-----SGKLCLFTDLLGDPICRVR-HSPAFL-MLVAEVGDEIVGMIRGCIKTV 90 (419)
Q Consensus 18 ~l~IR~~~~~~Dl~~I~eL~~~~e~~~-----~g~~~l~~~~~~d~i~ri~-~~p~~~-~lVAe~dgeiVG~i~~~~~~~ 90 (419)
.+.||+++ ++|.+.+.++...++... +.........+..-+.... ...... +++++.+|++||++......
T Consensus 43 ~~~lR~~~-~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~iiG~i~l~~~~- 120 (191)
T TIGR02382 43 DPGARVAT-ETDIPALRQLASAAFALSRFRAPWYAPDDSGRFYAQWVENAVRGTFDHQCLILRDASGDPRGYVTLRELN- 120 (191)
T ss_pred CCcceeCC-hhhHHHHHHHHHHHhhccccCCCCcCHHHHHHHHHHHHHHHhcCCCCCeEEEEEccCCeEEEEEEEEecC-
Confidence 35799999 999999999998874311 1100000011111111111 121222 34556688999998654321
Q ss_pred ccCcccccccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChHHHHH
Q 014721 91 TCGKRISRNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYASVKL 170 (419)
Q Consensus 91 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~l 170 (419)
...++|..+.|+|+|||+|||++|++++++++++.|+..+.+.|..+|.+|++
T Consensus 121 --------------------------~~~~~i~~l~V~p~~rGkG~G~~ll~~~~~~a~~~g~~~I~l~v~~~N~~A~~- 173 (191)
T TIGR02382 121 --------------------------DTDARIGLLAVFPGAQSRGIGAELMQTALNWCYARGLTRLRVATQMGNTAALR- 173 (191)
T ss_pred --------------------------CCceEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEeCCCCHHHHH-
Confidence 12357778899999999999999999999999999999999999999999999
Q ss_pred HHHhCCCEEeeec
Q 014721 171 FTDKCGYSKFRTP 183 (419)
Q Consensus 171 FY~K~GF~~~~~~ 183 (419)
||+|+||+..+..
T Consensus 174 ~Y~klGF~~~~~~ 186 (191)
T TIGR02382 174 LYIRSGANIESTA 186 (191)
T ss_pred HHHHcCCccccce
Confidence 5999999987764
No 11
>PLN02706 glucosamine 6-phosphate N-acetyltransferase
Probab=99.51 E-value=5.4e-13 Score=117.46 Aligned_cols=136 Identities=19% Similarity=0.254 Sum_probs=95.2
Q ss_pred ccEEEEECCCcCcHH-HHHHHHHHHccCCCCCcchhhhhccChhhhhhc-CCCcEEEEEEE--CCeEEEEEEeEeeeccc
Q 014721 17 RNIVVREFDPNKDCL-GVEDVERRCEVGPSGKLCLFTDLLGDPICRVRH-SPAFLMLVAEV--GDEIVGMIRGCIKTVTC 92 (419)
Q Consensus 17 ~~l~IR~~~~~~Dl~-~I~eL~~~~e~~~~g~~~l~~~~~~d~i~ri~~-~p~~~~lVAe~--dgeiVG~i~~~~~~~~~ 92 (419)
..+.||+++ .+|.+ .+.+++....... ....+.+...+.++.. ......+++++ +|++||++...+.....
T Consensus 5 ~~~~ir~~~-~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~ 79 (150)
T PLN02706 5 EKFKVRRLE-ISDKSKGFLELLQQLTVVG----DVTEEEFEARFQELASLGDDHLICVIEDAASGRIIATGSVFVERKFI 79 (150)
T ss_pred CceEEeEhh-hcccchHHHHHHHhccCCC----CCCHHHHHHHHHHHHhCCCcEEEEEEEeCCCCcEEEEEEEEEEeecc
Confidence 346799999 99987 5888776542211 1111122222333322 22244566666 68999998765332110
Q ss_pred CcccccccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChHHHHHHH
Q 014721 93 GKRISRNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYASVKLFT 172 (419)
Q Consensus 93 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~lFY 172 (419)
......++|..++|+|+|||+|||+.|++.++++++++|+..+.+.+..+|.+ ||
T Consensus 80 ---------------------~~~~~~~~i~~i~V~~~~rg~GiG~~ll~~~~~~a~~~g~~~i~l~~~~~N~~----~y 134 (150)
T PLN02706 80 ---------------------RNCGKVGHIEDVVVDSAARGKGLGKKIIEALTEHARSAGCYKVILDCSEENKA----FY 134 (150)
T ss_pred ---------------------cCCCcEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEeccccHH----HH
Confidence 01235678889999999999999999999999999999999999999999964 79
Q ss_pred HhCCCEEeee
Q 014721 173 DKCGYSKFRT 182 (419)
Q Consensus 173 ~K~GF~~~~~ 182 (419)
+|+||+..+.
T Consensus 135 ~k~GF~~~g~ 144 (150)
T PLN02706 135 EKCGYVRKEI 144 (150)
T ss_pred HHCcCEEehh
Confidence 9999998764
No 12
>TIGR02406 ectoine_EctA L-2,4-diaminobutyric acid acetyltransferase. This enzyme family is the EctA of ectoine biosynthesis. Ectoine is a compatible solute, analagous to trehalose, betaines, etc., found often in halotolerant organisms. EctA is L-2,4-diaminobutyric acid acetyltransferase, also called DABA acetyltransferase.
Probab=99.50 E-value=3.2e-13 Score=120.92 Aligned_cols=124 Identities=20% Similarity=0.249 Sum_probs=92.9
Q ss_pred EEECCCcCcHHHHHHHHHHHccCCCCCcchhhhhccChhhhhhcCCCcEEEEEE-ECCeEEEEEEeEeeecccCcccccc
Q 014721 21 VREFDPNKDCLGVEDVERRCEVGPSGKLCLFTDLLGDPICRVRHSPAFLMLVAE-VGDEIVGMIRGCIKTVTCGKRISRN 99 (419)
Q Consensus 21 IR~~~~~~Dl~~I~eL~~~~e~~~~g~~~l~~~~~~d~i~ri~~~p~~~~lVAe-~dgeiVG~i~~~~~~~~~g~~~~~~ 99 (419)
||+++ .+|+++|.+|+..+........... .......+ ...++++ .+|++||++.+....
T Consensus 1 IR~~~-~~D~~~i~~L~~~~~~~~~~~~~~~-------~~~~~~~~-~~~~v~~~~~~~ivG~~~~~~~~---------- 61 (157)
T TIGR02406 1 FRPPR-IEDGAGIWELVKDCPPLDLNSSYAY-------LLLCTDFA-DTSIVAESEGGEIVGFVSGYLRP---------- 61 (157)
T ss_pred CCCCc-cccHHHHHHHHHhCCCCCcccceeh-------hhhhhhcC-CcEEEEEcCCCeEEEEEEEEecC----------
Confidence 57889 9999999999988743221111000 01111222 3466776 468999997543221
Q ss_pred cccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChHHHHHHHHhCCCEE
Q 014721 100 TKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYASVKLFTDKCGYSK 179 (419)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~lFY~K~GF~~ 179 (419)
......++..++|+|+|||+|||++|++.+++++++.++..+.+.+..+|.+|+++ |+|+||+.
T Consensus 62 ---------------~~~~~~~i~~l~V~p~~rg~GiG~~L~~~l~~~a~~~~~~~i~~~v~~~N~~a~~l-y~k~G~~~ 125 (157)
T TIGR02406 62 ---------------DRPDVLFVWQVAVDPRARGKGLARRLLEALLERVACERVRHLETTITPDNQASRAL-FKALARRR 125 (157)
T ss_pred ---------------CCCCeEEEEEEEEChHhccCcHHHHHHHHHHHHHHhCCCCEEEEEEcCCCHHHHHH-HHHhCccc
Confidence 12245788999999999999999999999999999999999999999999999995 99999975
No 13
>PF13523 Acetyltransf_8: Acetyltransferase (GNAT) domain; PDB: 2VQY_A 2BUE_A 1V0C_A 1YK3_D 2PR8_A 2QIR_A 2PRB_A 2QML_A 2PC1_A.
Probab=99.50 E-value=3.1e-13 Score=119.40 Aligned_cols=145 Identities=18% Similarity=0.151 Sum_probs=98.4
Q ss_pred EEECCCcCcHHHHHHHHHHHccCCCCCcchhhhhccChhhhhhcCCCcEEEEEEECCeEEEEEEeEeeecccCccccccc
Q 014721 21 VREFDPNKDCLGVEDVERRCEVGPSGKLCLFTDLLGDPICRVRHSPAFLMLVAEVGDEIVGMIRGCIKTVTCGKRISRNT 100 (419)
Q Consensus 21 IR~~~~~~Dl~~I~eL~~~~e~~~~g~~~l~~~~~~d~i~ri~~~p~~~~lVAe~dgeiVG~i~~~~~~~~~g~~~~~~~ 100 (419)
||+++..+|++.|.++.+......+.......+........+...+....+|++.+|+++|++.........
T Consensus 1 ~R~a~~~~Dl~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~dg~~~g~~~~~~~~~~~-------- 72 (152)
T PF13523_consen 1 LRPATTPDDLPLILQWLNQPHVREFWDQDPSQEWVEEYPEQLEADPGHHPYVAEDDGEPIGYFEIYWPDEDY-------- 72 (152)
T ss_dssp EEE---GGGHHHHHHHHTSHHHHCCH-CCCTHHHHHHHHHHHCHTTTEEEEEEEETTEEEEEEEEEEGGGSS--------
T ss_pred CeeCccHHHHHHHHHHHHhHHHHHHccCCCCHHHHHHHHhhhcccCCceEEEEEECCEEEEEEEEecccccc--------
Confidence 466665799999999987763222211111112222222333345667789999999999998553221110
Q ss_pred ccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHc-CCcEEEEEEccCChHHHHHHHHhCCCEE
Q 014721 101 KYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRES-GVEYSYIATENDNYASVKLFTDKCGYSK 179 (419)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~-G~~~i~l~t~~~N~~s~~lFY~K~GF~~ 179 (419)
........+..+.|+|+|||+|+|+.+++.+++.+.+. +++.+.+.+..+|.+|+++ |+|+||+.
T Consensus 73 -------------~~~~~~~~~~~~~~~~~~rg~G~g~~~~~~~~~~~~~~~~~~~i~~~~~~~N~~~~~~-~~k~GF~~ 138 (152)
T PF13523_consen 73 -------------DADDGDRGIHRLIVDPEYRGQGLGKAMLRALIEFLFEDPGVDRIVLDPHEDNTRAIRL-YEKAGFRK 138 (152)
T ss_dssp ----------------TTEEEEEEEESTGGGTTSSHHHHHHHHHHHHHHTSTT--EEEEEEBTT-HHHHHH-HHHTT-EE
T ss_pred -------------cCCCCEEEEeeeeechhhcCCCHHHHHHHHHHHHHHhCCCCCEEEEecCcCCHHHHHH-HHHcCCEE
Confidence 11335667888899999999999999999999999987 8999999999999999997 99999999
Q ss_pred eeeceeee
Q 014721 180 FRTPSILV 187 (419)
Q Consensus 180 ~~~~~~~~ 187 (419)
+++..+..
T Consensus 139 ~g~~~~~~ 146 (152)
T PF13523_consen 139 VGEFEFPD 146 (152)
T ss_dssp EEEEEESS
T ss_pred eeEEECCC
Confidence 99965443
No 14
>TIGR03827 GNAT_ablB putative beta-lysine N-acetyltransferase. Members of this protein family are GNAT family acetyltransferases, based on a seed alignment in which every member is associated with a lysine 2,3-aminomutase family protein, usually as the adjacent gene. This family includes AblB, the enzyme beta-lysine acetyltransferase that completes the two-step synthesis of the osmolyte (compatible solute) N-epsilon-acetyl-beta-lysine; all members of the family may have this function. Note that N-epsilon-acetyl-beta-lysine has been observed only in methanogenic archaea (e.g. Methanosarcina) but that this model, paired with TIGR03820, suggests a much broader distribution.
Probab=99.50 E-value=3.4e-13 Score=130.98 Aligned_cols=133 Identities=15% Similarity=0.166 Sum_probs=102.2
Q ss_pred ccEEEEECCCcCcHHHHHHHHHHHccCCCCCcchhhhhccChhhhhhcCCCcEEEEEEECCeEEEEEEeEeeecccCccc
Q 014721 17 RNIVVREFDPNKDCLGVEDVERRCEVGPSGKLCLFTDLLGDPICRVRHSPAFLMLVAEVGDEIVGMIRGCIKTVTCGKRI 96 (419)
Q Consensus 17 ~~l~IR~~~~~~Dl~~I~eL~~~~e~~~~g~~~l~~~~~~d~i~ri~~~p~~~~lVAe~dgeiVG~i~~~~~~~~~g~~~ 96 (419)
..+.||+++ ++|++.+.+|.+..+...+... ...+. +.+... +...+++++.+|++||++.+.+..
T Consensus 114 ~~~~IR~a~-~~D~~~l~~L~~~v~~~~~~~~-~~~~~----l~~~~~-~~~~~~v~~~~g~iVG~~~~~~~~------- 179 (266)
T TIGR03827 114 EGFTLRIAT-EDDADAMAALYRKVFPTYPFPI-HDPAY----LLETMK-SNVVYFGVEDGGKIIALASAEMDP------- 179 (266)
T ss_pred CceEEEECC-HHHHHHHHHHHHHHhccCCCCc-cCHHH----HHHHhc-CCcEEEEEEECCEEEEEEEEecCC-------
Confidence 458899999 9999999999988754221100 00111 111111 335577888899999998653221
Q ss_pred ccccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChHHHHHHHHhCC
Q 014721 97 SRNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYASVKLFTDKCG 176 (419)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~lFY~K~G 176 (419)
....++|..++|+|+|||+|||++|++.+++++++.|+..+++.+...|.+|.++ |+|+|
T Consensus 180 -------------------~~~~~eI~~i~V~P~yRG~GiG~~Ll~~l~~~a~~~g~~~l~~~~~~~n~~a~~l-y~k~G 239 (266)
T TIGR03827 180 -------------------ENGNAEMTDFATLPEYRGKGLAKILLAAMEKEMKEKGIRTAYTIARASSYGMNIT-FARLG 239 (266)
T ss_pred -------------------CCCcEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCcEEEeehhhcchhHHHH-HHHcC
Confidence 1245789999999999999999999999999999999999999999999999995 99999
Q ss_pred CEEeeec
Q 014721 177 YSKFRTP 183 (419)
Q Consensus 177 F~~~~~~ 183 (419)
|+..++.
T Consensus 240 F~~~G~l 246 (266)
T TIGR03827 240 YAYGGTL 246 (266)
T ss_pred CccccEE
Confidence 9988874
No 15
>TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase. Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species.
Probab=99.49 E-value=5.5e-12 Score=123.41 Aligned_cols=150 Identities=19% Similarity=0.117 Sum_probs=102.2
Q ss_pred ECCCcCcHHHHHHHHHHHccCCCCCcchhhhhccChhhhhhcCCCcEEEEEEECCeEEEEEEeEeeecccCccccccccc
Q 014721 23 EFDPNKDCLGVEDVERRCEVGPSGKLCLFTDLLGDPICRVRHSPAFLMLVAEVGDEIVGMIRGCIKTVTCGKRISRNTKY 102 (419)
Q Consensus 23 ~~~~~~Dl~~I~eL~~~~e~~~~g~~~l~~~~~~d~i~ri~~~p~~~~lVAe~dgeiVG~i~~~~~~~~~g~~~~~~~~~ 102 (419)
+++ ++|+++|.+|...++..... .....+.... +..... .....+++.++|++||++......
T Consensus 5 ~l~-~~d~~~v~~L~~~~~~~~~~-~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~vG~~~~~~~~------------- 67 (292)
T TIGR03448 5 ALD-ADLRRDVRELLAAATAVDGV-APVSEQVLRG-LREPGA-GHTRHLVAVDSDPIVGYANLVPAR------------- 67 (292)
T ss_pred cCC-HHHHHHHHHHHHHHHhcCCC-CCCCHHHHhh-ccccCC-CCceEEEEEECCEEEEEEEEEcCC-------------
Confidence 466 89999999999988543211 1111111111 111111 123467788899999998654321
Q ss_pred ccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChHHHHHHHHhCCCEEeee
Q 014721 103 TTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYASVKLFTDKCGYSKFRT 182 (419)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~lFY~K~GF~~~~~ 182 (419)
....+|..++|+|+|||+|||++|++++++.+. ..+.+.+..+|.++++ ||+++||+..++
T Consensus 68 --------------~~~~~~~~l~V~p~~rg~GiG~~Ll~~~~~~~~----~~~~~~~~~~n~~a~~-fy~~~Gf~~~~~ 128 (292)
T TIGR03448 68 --------------GTDPAMAELVVHPAHRRRGIGRALIRALLAKGG----GRLRVWAHGDLPAARA-LASRLGLVPTRE 128 (292)
T ss_pred --------------CCcceEEEEEECHhhcCCCHHHHHHHHHHHhcc----CceEEEEcCCCHHHHH-HHHHCCCEEccE
Confidence 012467889999999999999999999999764 4467778889999999 699999999988
Q ss_pred ceeeeccccc---ccccCCcceeeeecCh
Q 014721 183 PSILVNPVFA---HRLIVPKQVTIIQLNP 208 (419)
Q Consensus 183 ~~~~~~pv~~---~~~~~~~~v~i~~l~~ 208 (419)
...+..++.. .....|.++++..+..
T Consensus 129 ~~~~~~~l~~~~~~~~~~~~g~~~r~~~~ 157 (292)
T TIGR03448 129 LLQMRRPLRDLELPEPQVPDGVTVRAYVG 157 (292)
T ss_pred EEEEEecCCccccCCCCCCCCeEeeccCC
Confidence 7777654332 2233567788887653
No 16
>TIGR01575 rimI ribosomal-protein-alanine acetyltransferase. Members of this model belong to the GCN5-related N-acetyltransferase (GNAT) superfamily. This model covers prokarotes and the archaea. The seed contains a characterized accession for Gram negative E. coli. An untraceable characterized accession (PIR|S66013) for Gram positive B. subtilis scores well (205.0) in the full alignment. Characterized members are lacking in the archaea. Noise cutoff (72.4) was set to exclude M. loti paralog of rimI. Trusted cutoff (80.0) was set at next highest scoring member in the mini-database.
Probab=99.49 E-value=4.8e-13 Score=113.68 Aligned_cols=118 Identities=22% Similarity=0.292 Sum_probs=90.3
Q ss_pred cHHHHHHHHHHHccCCCCCcchhhhhccChhhhhhcCCCcEEEEEEECCeEEEEEEeEeeecccCcccccccccccCCCC
Q 014721 29 DCLGVEDVERRCEVGPSGKLCLFTDLLGDPICRVRHSPAFLMLVAEVGDEIVGMIRGCIKTVTCGKRISRNTKYTTNDIE 108 (419)
Q Consensus 29 Dl~~I~eL~~~~e~~~~g~~~l~~~~~~d~i~ri~~~p~~~~lVAe~dgeiVG~i~~~~~~~~~g~~~~~~~~~~~~~~~ 108 (419)
|++.+.+++..++..++....+.... . .....++++..++++||++......
T Consensus 1 d~~~i~~~~~~~~~~~~~~~~~~~~~--------~-~~~~~~~~~~~~~~~vg~~~~~~~~------------------- 52 (131)
T TIGR01575 1 DLKAVLEIEAAAFAFPWTEAQFAEEL--------A-NYHLCYLLARIGGKVVGYAGVQIVL------------------- 52 (131)
T ss_pred CHHHHHHHHHhhCCCCCCHHHHHHHh--------c-CCCceEEEEecCCeEEEEEEEEecC-------------------
Confidence 67888898888876644322221111 1 1224466777789999998643211
Q ss_pred CCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChHHHHHHHHhCCCEEeeece
Q 014721 109 PPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYASVKLFTDKCGYSKFRTPS 184 (419)
Q Consensus 109 ~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~lFY~K~GF~~~~~~~ 184 (419)
...+|..++|+|+|||+|+|++|++++++++.+.|...+++.+...|.+|++ ||+|+||+..++..
T Consensus 53 ---------~~~~i~~~~v~~~~rg~G~g~~ll~~~~~~~~~~~~~~i~~~~~~~n~~~~~-~y~~~Gf~~~~~~~ 118 (131)
T TIGR01575 53 ---------DEAHILNIAVKPEYQGQGIGRALLRELIDEAKGRGVNEIFLEVRVSNIAAQA-LYKKLGFNEIAIRR 118 (131)
T ss_pred ---------CCeEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCeEEEEEecccHHHHH-HHHHcCCCcccccc
Confidence 2357888999999999999999999999999999999999999999999998 59999999887743
No 17
>KOG3139 consensus N-acetyltransferase [General function prediction only]
Probab=99.47 E-value=1.7e-12 Score=114.22 Aligned_cols=95 Identities=24% Similarity=0.271 Sum_probs=78.2
Q ss_pred cEEEEEEECCe-EEEEEEeEeeecccCcccccccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHH
Q 014721 68 FLMLVAEVGDE-IVGMIRGCIKTVTCGKRISRNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEE 146 (419)
Q Consensus 68 ~~~lVAe~dge-iVG~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~ 146 (419)
..+++|.+++. .||++.+.... . .....+||..|+|+++|||+|||++|++.+++
T Consensus 56 ~~~~~a~d~~~~~VGai~ck~~~-~-----------------------r~~~rgyi~mLaV~~e~Rg~GIg~aLvr~aId 111 (165)
T KOG3139|consen 56 CFCFLALDEKGDTVGAIVCKLDT-H-----------------------RNTLRGYIAMLAVDSEYRGQGIGKALVRKAID 111 (165)
T ss_pred eEEEEEEcCCCceEEEEEEeccc-c-----------------------CCcceEEEEEEEechhhccccHHHHHHHHHHH
Confidence 45677766544 69987443322 1 11368999999999999999999999999999
Q ss_pred HHHHcCCcEEEEEEccCChHHHHHHHHhCCCEEeeeceeee
Q 014721 147 WFRESGVEYSYIATENDNYASVKLFTDKCGYSKFRTPSILV 187 (419)
Q Consensus 147 ~a~~~G~~~i~l~t~~~N~~s~~lFY~K~GF~~~~~~~~~~ 187 (419)
.++.+|++.+.|.|+..|.+|++| |+++||...+....|.
T Consensus 112 ~m~~~g~~eVvLeTe~~n~~A~~L-Y~sLGF~r~~r~~~YY 151 (165)
T KOG3139|consen 112 AMRSRGYSEVVLETEVTNLSALRL-YESLGFKRDKRLFRYY 151 (165)
T ss_pred HHHHCCCcEEEEeccccchHHHHH-HHhcCceEecceeEEE
Confidence 999999999999999999999997 9999999877655443
No 18
>COG0456 RimI Acetyltransferases [General function prediction only]
Probab=99.47 E-value=5.2e-13 Score=120.20 Aligned_cols=136 Identities=27% Similarity=0.358 Sum_probs=102.5
Q ss_pred cccEEEEECCCcCcHH--HHHHHHHHHccC--CCCCcchhhhhccChhhhhhcCCCcEEEEEEE---CC----eEEEEEE
Q 014721 16 MRNIVVREFDPNKDCL--GVEDVERRCEVG--PSGKLCLFTDLLGDPICRVRHSPAFLMLVAEV---GD----EIVGMIR 84 (419)
Q Consensus 16 ~~~l~IR~~~~~~Dl~--~I~eL~~~~e~~--~~g~~~l~~~~~~d~i~ri~~~p~~~~lVAe~---dg----eiVG~i~ 84 (419)
...+.+|.+. ..|+. .+.++...++.. +|....+...... .....+++.. ++ +++|++.
T Consensus 9 ~~~~~ir~~~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---------~~~~~~v~~~~~~~~~~~~~~~G~~~ 78 (177)
T COG0456 9 EDKVTIREAI-NKDLLDVALAALEARTFDIRLPWSREYFEKDLTQ---------APELLLVAETGGLDGLLDGKVVGFLL 78 (177)
T ss_pred ccceehhhhh-hcccchHHHHHHhhhcCCCCCcchHHHHHHHHhh---------CcceeEEEEecccCCCcccceeEEEE
Confidence 4456799999 99999 888888888774 4433333222222 2255667765 33 5999987
Q ss_pred eEeeecccCcccccccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCC-cEEEEEEccC
Q 014721 85 GCIKTVTCGKRISRNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGV-EYSYIATEND 163 (419)
Q Consensus 85 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~-~~i~l~t~~~ 163 (419)
..... +.. .. ...++|..++|+|+|||+|||++|++++++.++++|. +.+.|.|..+
T Consensus 79 ~~~~~---~~~------------------~~-~~~~~i~~iaV~p~~r~~Gig~~Ll~~~~~~~~~~~~~~~~~L~V~~~ 136 (177)
T COG0456 79 VRVVD---GRP------------------SA-DHEGHIYNLAVDPEYRGRGIGRALLDEALERLRERGLADKIVLEVRES 136 (177)
T ss_pred EEEec---CCc------------------cc-cCccEEEEEEEChHhhcCCHHHHHHHHHHHHHHhcCCCceEEEEEecC
Confidence 75222 110 00 2478999999999999999999999999999999986 8999999999
Q ss_pred ChHHHHHHHHhCCCEEeeece
Q 014721 164 NYASVKLFTDKCGYSKFRTPS 184 (419)
Q Consensus 164 N~~s~~lFY~K~GF~~~~~~~ 184 (419)
|.+|+.+ |+|+||+......
T Consensus 137 N~~Ai~l-Y~~~GF~~~~~~~ 156 (177)
T COG0456 137 NEAAIGL-YRKLGFEVVKIRK 156 (177)
T ss_pred ChHHHHH-HHHcCCEEEeeeh
Confidence 9999995 9999999887744
No 19
>TIGR03103 trio_acet_GNAT GNAT-family acetyltransferase TIGR03103. Members of this protein family belong to the GNAT family of acetyltransferases. Each is part of a conserved three-gene cassette sparsely distributed across at least twenty different species known so far, including alpha, beta, and gamma Proteobacteria, Mycobacterium, and Prosthecochloris, which is a member of the Chlorobi. The other two members of the cassette are a probable protease and an asparagine synthetase family protein.
Probab=99.46 E-value=1.3e-12 Score=138.92 Aligned_cols=138 Identities=22% Similarity=0.319 Sum_probs=103.7
Q ss_pred ccEEEEECCCcCcHHHHHHHHHHHccCCCCCcchhhhhccChhhhhhcCCCcEEEEEEE--CCeEEEEEEeEeeecccCc
Q 014721 17 RNIVVREFDPNKDCLGVEDVERRCEVGPSGKLCLFTDLLGDPICRVRHSPAFLMLVAEV--GDEIVGMIRGCIKTVTCGK 94 (419)
Q Consensus 17 ~~l~IR~~~~~~Dl~~I~eL~~~~e~~~~g~~~l~~~~~~d~i~ri~~~p~~~~lVAe~--dgeiVG~i~~~~~~~~~g~ 94 (419)
..+.||++..++|+++|.+|++.+...++....+. .....+...++|+++ +|++||++.+.......
T Consensus 81 ~g~~IR~~~~~~D~~~I~~L~~~~~~~p~~~~~~~---------~~~~~~~~~~~vA~~~~~g~IVG~~~~~~~~~~~-- 149 (547)
T TIGR03103 81 RGFTVRRLRGPADVDAINRLYAARGMVPVRVDFVL---------DHRHSRAITYLVAEDEASGAIIGTVMGVDHRKAF-- 149 (547)
T ss_pred CCcEEEeCCChhHHHHHHHHHHhcCCCCCCHHHHH---------HHhcCCCceEEEEEECCCCeEEEEEEEEeccccc--
Confidence 44889998438999999999998765443322111 112234456788875 59999998754322110
Q ss_pred ccccccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChHHHHHHHHh
Q 014721 95 RISRNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYASVKLFTDK 174 (419)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~lFY~K 174 (419)
......++|..|+|+|+|||+|||++|+++++++++++|+..+++.+..+|..|++ ||+|
T Consensus 150 -------------------~d~~~~~~i~~l~V~P~~Rg~GIG~~Ll~~l~e~a~~~G~~~i~L~V~~~N~~Ai~-fY~k 209 (547)
T TIGR03103 150 -------------------NDPEHGSSLWCLAVDPQAAHPGVGEALVRALAEHFQSRGCAYMDLSVMHDNEQAIA-LYEK 209 (547)
T ss_pred -------------------cCCCCCeEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEcCCCHHHHH-HHHH
Confidence 00113468899999999999999999999999999999999999999999999999 5999
Q ss_pred CCCEEeeecee
Q 014721 175 CGYSKFRTPSI 185 (419)
Q Consensus 175 ~GF~~~~~~~~ 185 (419)
+||+.+.....
T Consensus 210 lGf~~~~~y~~ 220 (547)
T TIGR03103 210 LGFRRIPVFAL 220 (547)
T ss_pred CCCEEeeEEEE
Confidence 99998876443
No 20
>PRK07922 N-acetylglutamate synthase; Validated
Probab=99.45 E-value=1.6e-12 Score=117.82 Aligned_cols=123 Identities=23% Similarity=0.273 Sum_probs=88.7
Q ss_pred ccEEEEECCCcCcHHHHHHHHHHHccCCCCCcchhhhhccChhhhhhcCCCcEEEEEE-ECCeEEEEEEeEeeecccCcc
Q 014721 17 RNIVVREFDPNKDCLGVEDVERRCEVGPSGKLCLFTDLLGDPICRVRHSPAFLMLVAE-VGDEIVGMIRGCIKTVTCGKR 95 (419)
Q Consensus 17 ~~l~IR~~~~~~Dl~~I~eL~~~~e~~~~g~~~l~~~~~~d~i~ri~~~p~~~~lVAe-~dgeiVG~i~~~~~~~~~g~~ 95 (419)
.+++||+++ ++|.+.+.+|.+............ ...+... ...+++++ .+|++||++......
T Consensus 4 ~~i~iR~a~-~~D~~~i~~L~~~~~~~~~~~~~~--------~~~~~~~-~~~~~va~~~~~~iiG~~~~~~~~------ 67 (169)
T PRK07922 4 GAITVRRAR-TSDVPAIKRLVDPYAQGRILLEKN--------LVTLYEA-VQEFWVAEHLDGEVVGCGALHVMW------ 67 (169)
T ss_pred CCceeecCC-HhhHHHHHHHHHHHhhcCccccch--------HHHHHhh-cCcEEEEEecCCcEEEEEEEeecC------
Confidence 346799999 999999999987653221100000 1111111 13367887 889999997654321
Q ss_pred cccccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChHHHHHHHHhC
Q 014721 96 ISRNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYASVKLFTDKC 175 (419)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~lFY~K~ 175 (419)
...+.|..++|+|+|||+|||++|+++++++++++|++.+++.+.. ++ ||+|+
T Consensus 68 ---------------------~~~~~i~~l~V~p~~rgkGiG~~Ll~~~~~~a~~~g~~~l~~~~~~-----~~-fY~k~ 120 (169)
T PRK07922 68 ---------------------EDLAEIRTVAVDPAARGRGVGHAIVERLLDVARELGLSRVFVLTFE-----VE-FFARH 120 (169)
T ss_pred ---------------------CCceEEEEEEECHHHhCCCHHHHHHHHHHHHHHHcCCCEEEEEecc-----HH-HHHHC
Confidence 1346788899999999999999999999999999999999876642 34 79999
Q ss_pred CCEEeee
Q 014721 176 GYSKFRT 182 (419)
Q Consensus 176 GF~~~~~ 182 (419)
||+..+.
T Consensus 121 GF~~~~~ 127 (169)
T PRK07922 121 GFVEIDG 127 (169)
T ss_pred CCEECcc
Confidence 9998654
No 21
>KOG3216 consensus Diamine acetyltransferase [Amino acid transport and metabolism]
Probab=99.45 E-value=2.7e-12 Score=111.72 Aligned_cols=137 Identities=22% Similarity=0.209 Sum_probs=100.8
Q ss_pred cEEEEECCCcCcHHHHHHHHHHHccCC--CCCcchhhhhccChhhh--hhcCCCcEEEEEEE---CCeEEEEEEeEeeec
Q 014721 18 NIVVREFDPNKDCLGVEDVERRCEVGP--SGKLCLFTDLLGDPICR--VRHSPAFLMLVAEV---GDEIVGMIRGCIKTV 90 (419)
Q Consensus 18 ~l~IR~~~~~~Dl~~I~eL~~~~e~~~--~g~~~l~~~~~~d~i~r--i~~~p~~~~lVAe~---dgeiVG~i~~~~~~~ 90 (419)
.++||.++ ++|.+.+..|+++-.... ......... -+++ ....|-..++|+.. ++.++|++.-...-.
T Consensus 3 ~~~IR~at-~~D~~~i~rLikela~Fek~~~~v~~te~----~l~~~~F~d~~~~~~~v~~ie~~~~~~aGf~~yf~~ys 77 (163)
T KOG3216|consen 3 NIRIRLAT-PKDCEDILRLIKELAEFEKLEDQVEATEE----NLARDGFIDPPFKHWLVAAIETSGEVVAGFALYFNNYS 77 (163)
T ss_pred ceEEEecC-cccHHHHHHHHHHHHHHHHhccchhhchh----hhhhhhccCCCccEEEEEEEecCCCceeEEeeeecccc
Confidence 47799999 999999999998872111 110111110 0222 12234455666655 789999985543322
Q ss_pred ccCcccccccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChHHHHH
Q 014721 91 TCGKRISRNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYASVKL 170 (419)
Q Consensus 91 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~l 170 (419)
+. ...+..||..|.|.|.|||+|+|++|++.+-+.+.+.|+..++..|..-|++|+.+
T Consensus 78 tW----------------------~~k~~iYleDlyV~e~yR~kG~Gs~Ll~~va~~A~~~G~~rv~w~vldwN~rAi~l 135 (163)
T KOG3216|consen 78 TW----------------------LGKQGIYLEDLYVREQYRGKGIGSKLLKFVAEEADKLGTPRVEWVVLDWNHRAILL 135 (163)
T ss_pred cc----------------------cccceEEEEeeEecchhcccChHHHHHHHHHHHHHHcCCCcEEEEEeccchhHHHH
Confidence 11 01156799999999999999999999999999999999999999999999999995
Q ss_pred HHHhCCCEEeee
Q 014721 171 FTDKCGYSKFRT 182 (419)
Q Consensus 171 FY~K~GF~~~~~ 182 (419)
|+|.|++....
T Consensus 136 -Y~k~gaq~l~~ 146 (163)
T KOG3216|consen 136 -YEKVGAQDLKE 146 (163)
T ss_pred -HHHhCccccce
Confidence 99999997776
No 22
>PRK10975 TDP-fucosamine acetyltransferase; Provisional
Probab=99.44 E-value=1.9e-12 Score=119.58 Aligned_cols=138 Identities=18% Similarity=0.128 Sum_probs=96.8
Q ss_pred cEEEEECCCcCcHHHHHHHHHHHccCC-----CCCcchhhhhccChhhh-hhcCCCcEEEEEE-ECCeEEEEEEeEeeec
Q 014721 18 NIVVREFDPNKDCLGVEDVERRCEVGP-----SGKLCLFTDLLGDPICR-VRHSPAFLMLVAE-VGDEIVGMIRGCIKTV 90 (419)
Q Consensus 18 ~l~IR~~~~~~Dl~~I~eL~~~~e~~~-----~g~~~l~~~~~~d~i~r-i~~~p~~~~lVAe-~dgeiVG~i~~~~~~~ 90 (419)
...||+++ ++|++.+.++....+... +............-+.+ ........++++. .+|++||++......
T Consensus 46 ~~~iR~a~-~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~~vG~~~l~~~~- 123 (194)
T PRK10975 46 TTGARVAT-ETDIPALRQLAAQAFAQSRFRAPWYAPDDSGRFYAQWIENAVRGTFDHQCLLLRDASGQIQGFVTLRELN- 123 (194)
T ss_pred CCCcccCC-cccHHHHHHHHHHHhhhccccCccCChhHHHHHHHHHHHHhhccccCCcEEEEEcCCCCEEEEEEEEecC-
Confidence 46799999 999999999987764321 11111000111110111 1111122345554 568999998654221
Q ss_pred ccCcccccccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChHHHHH
Q 014721 91 TCGKRISRNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYASVKL 170 (419)
Q Consensus 91 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~l 170 (419)
...++|..+.|+|+|||+|||++|++.+++++++.|+..+.+.|..+|.+|++
T Consensus 124 --------------------------~~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~- 176 (194)
T PRK10975 124 --------------------------DTDARIGLLAVFPGAQGRGIGARLMQAALNWCQARGLTRLRVATQMGNLAALR- 176 (194)
T ss_pred --------------------------CCceEEEEEEEChhhcCCCHHHHHHHHHHHHHHHcCCCEEEEEeCCCcHHHHH-
Confidence 12367788899999999999999999999999999999999999999999999
Q ss_pred HHHhCCCEEeeece
Q 014721 171 FTDKCGYSKFRTPS 184 (419)
Q Consensus 171 FY~K~GF~~~~~~~ 184 (419)
||+|+||+..++..
T Consensus 177 ~yek~Gf~~~~~~~ 190 (194)
T PRK10975 177 LYIRSGANIESTAY 190 (194)
T ss_pred HHHHCCCeEeEEEe
Confidence 59999999888743
No 23
>COG3153 Predicted acetyltransferase [General function prediction only]
Probab=99.44 E-value=2e-12 Score=116.66 Aligned_cols=132 Identities=23% Similarity=0.244 Sum_probs=101.6
Q ss_pred EEEEECCCcCcHHHHHHHHHHHccCCCCCcchhhhhccChhhhhhcCCCcEEEEEEECCeEEEEEEeEeeecccCccccc
Q 014721 19 IVVREFDPNKDCLGVEDVERRCEVGPSGKLCLFTDLLGDPICRVRHSPAFLMLVAEVGDEIVGMIRGCIKTVTCGKRISR 98 (419)
Q Consensus 19 l~IR~~~~~~Dl~~I~eL~~~~e~~~~g~~~l~~~~~~d~i~ri~~~p~~~~lVAe~dgeiVG~i~~~~~~~~~g~~~~~ 98 (419)
+.||..+ +.|.++|.++.++.|. .+.+.. .-+.+..-........+||+++|++||.|....-+.. |
T Consensus 4 ~~ir~e~-~~d~~~i~~~~~~aF~--~~~e~~----~v~~lR~~~~~~~~LslVA~d~g~vvG~Il~s~v~~~-g----- 70 (171)
T COG3153 4 MLIRTET-PADIPAIEALTREAFG--PGREAK----LVDKLREGGRPDLTLSLVAEDDGEVVGHILFSPVTVG-G----- 70 (171)
T ss_pred cEEEecC-hhhHHHHHHHHHHHhh--cchHHH----HHHHHHhcCCcccceeEEEeeCCEEEEEEEEeEEEec-C-----
Confidence 5699999 9999999999999886 221111 1111222233345778999999999999987766542 1
Q ss_pred ccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChHHHHHHHHhCCCE
Q 014721 99 NTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYASVKLFTDKCGYS 178 (419)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~lFY~K~GF~ 178 (419)
.......+.-|+|+|+|||||||++|++..++.++..|+..+.+.-... ||.|+||+
T Consensus 71 ----------------~~~~~~~LaPLaV~p~~qg~GIG~~Lvr~~le~a~~~G~~~v~vlGdp~-------YY~rfGF~ 127 (171)
T COG3153 71 ----------------EELGWLGLAPLAVDPEYQGQGIGSALVREGLEALRLAGASAVVVLGDPT-------YYSRFGFE 127 (171)
T ss_pred ----------------cccceEEEEeEEEchhhcCCcHHHHHHHHHHHHHHHCCCCEEEEecCcc-------cccccCcE
Confidence 1336778888999999999999999999999999999999887765555 89999999
Q ss_pred Eeeeceee
Q 014721 179 KFRTPSIL 186 (419)
Q Consensus 179 ~~~~~~~~ 186 (419)
......++
T Consensus 128 ~~~~~~l~ 135 (171)
T COG3153 128 PAAGAKLY 135 (171)
T ss_pred Eccccccc
Confidence 98885544
No 24
>PF13673 Acetyltransf_10: Acetyltransferase (GNAT) domain; PDB: 2FIW_A 1BOB_A 3FNC_B 3EXN_A.
Probab=99.43 E-value=1.8e-12 Score=108.65 Aligned_cols=113 Identities=22% Similarity=0.210 Sum_probs=77.8
Q ss_pred cHHHHHHHHHHHccCCCCC---cchhh-hhccChhhhhhcCCCcEEEEEEECCeEEEEEEeEeeecccCccccccccccc
Q 014721 29 DCLGVEDVERRCEVGPSGK---LCLFT-DLLGDPICRVRHSPAFLMLVAEVGDEIVGMIRGCIKTVTCGKRISRNTKYTT 104 (419)
Q Consensus 29 Dl~~I~eL~~~~e~~~~g~---~~l~~-~~~~d~i~ri~~~p~~~~lVAe~dgeiVG~i~~~~~~~~~g~~~~~~~~~~~ 104 (419)
|+++|.+|++......... ..... ....+.+.+....+...++|++++|++||++...
T Consensus 1 D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~------------------ 62 (117)
T PF13673_consen 1 DIPAIAELYREAWQENYWDYGPEQIDAWRYSPEDLEEYLEEGSHTIFVAEEGGEIVGFAWLE------------------ 62 (117)
T ss_dssp GHHHHHHHHHHHHHHHTTTTSHHHHHHHHSSHHHHHHHHCTCCCEEEEEEETTEEEEEEEEE------------------
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHHHHHhcCHHHHHHHHHhcCCEEEEEEECCEEEEEEEEc------------------
Confidence 7889999988873322111 11100 1112223444444446799999999999998643
Q ss_pred CCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChHHHHHHHHhCCC
Q 014721 105 NDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYASVKLFTDKCGY 177 (419)
Q Consensus 105 ~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~lFY~K~GF 177 (419)
+.+.|..+.|+|+|||+|||++|++.+++++++ |...+.+. .|..+.+ ||+|+||
T Consensus 63 -------------~~~~i~~l~v~p~~r~~Gig~~Ll~~~~~~~~~-~~~~l~~~---~~~~a~~-~y~~~GF 117 (117)
T PF13673_consen 63 -------------PDGEISHLYVLPEYRGRGIGRALLDAAEKEAKD-GIRRLTVE---ANERARR-FYRKLGF 117 (117)
T ss_dssp -------------TCEEEEEEEE-GGGTTSSHHHHHHHHHHHHHTT-TCEEEEEE---C-HHHHH-HHHHTT-
T ss_pred -------------CCCeEEEEEEChhhcCCcHHHHHHHHHHHHHHc-CCcEEEEE---eCHHHHH-HHHhCCC
Confidence 123478899999999999999999999999966 88766555 8888888 6999998
No 25
>PRK07757 acetyltransferase; Provisional
Probab=99.42 E-value=4.9e-12 Score=111.62 Aligned_cols=121 Identities=26% Similarity=0.182 Sum_probs=87.7
Q ss_pred EEEEECCCcCcHHHHHHHHHHHccCCCCCcchhhhhccChhhhhhcCCCcEEEEEEECCeEEEEEEeEeeecccCccccc
Q 014721 19 IVVREFDPNKDCLGVEDVERRCEVGPSGKLCLFTDLLGDPICRVRHSPAFLMLVAEVGDEIVGMIRGCIKTVTCGKRISR 98 (419)
Q Consensus 19 l~IR~~~~~~Dl~~I~eL~~~~e~~~~g~~~l~~~~~~d~i~ri~~~p~~~~lVAe~dgeiVG~i~~~~~~~~~g~~~~~ 98 (419)
+.||+++ ++|++.+.++............... ..+.... ..++++..+|++||++......
T Consensus 2 ~~ir~~~-~~D~~~l~~l~~~~~~~~~~~~~~~--------~~~~~~~-~~~~i~~~~~~lvG~~~l~~~~--------- 62 (152)
T PRK07757 2 MEIRKAR-LSDVKAIHALINVYAKKGLMLPRSL--------DELYENI-RDFYVAEEEGEIVGCCALHILW--------- 62 (152)
T ss_pred ceEeeCC-cccHHHHHHHHHHHHhcCCccCCCH--------HHHHhcc-CcEEEEEECCEEEEEEEEEecc---------
Confidence 5699999 9999999999876532221100100 1111111 2357778899999999765321
Q ss_pred ccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChHHHHHHHHhCCCE
Q 014721 99 NTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYASVKLFTDKCGYS 178 (419)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~lFY~K~GF~ 178 (419)
...++|.+++|+|+|||+|+|++|++.+++++.+.|+..+.+.+. + .+ ||+|+||+
T Consensus 63 ------------------~~~~~i~~v~V~p~~rg~Glg~~Ll~~l~~~a~~~g~~~i~~~~~--~---~~-~Y~k~GF~ 118 (152)
T PRK07757 63 ------------------EDLAEIRSLAVSEDYRGQGIGRMLVEACLEEARELGVKRVFALTY--Q---PE-FFEKLGFR 118 (152)
T ss_pred ------------------CCceEEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCCCeEEEEeC--c---HH-HHHHCCCE
Confidence 135688899999999999999999999999999999988876553 2 34 79999999
Q ss_pred Eeee
Q 014721 179 KFRT 182 (419)
Q Consensus 179 ~~~~ 182 (419)
....
T Consensus 119 ~~~~ 122 (152)
T PRK07757 119 EVDK 122 (152)
T ss_pred Eccc
Confidence 9876
No 26
>PF13420 Acetyltransf_4: Acetyltransferase (GNAT) domain; PDB: 3DR8_A 3DR6_A 2AE6_B 2JLM_C 2J8R_A 1YVO_B 2J8M_A 2J8N_A 2BL1_A 3IWG_A ....
Probab=99.42 E-value=4.4e-12 Score=111.89 Aligned_cols=137 Identities=19% Similarity=0.188 Sum_probs=92.0
Q ss_pred EEECCCcCcHHHHHHHHHHHc---cCCCCCcchhhhhccChhhhhhcCCCcEEEEEE-ECCeEEEEEEeEeeecccCccc
Q 014721 21 VREFDPNKDCLGVEDVERRCE---VGPSGKLCLFTDLLGDPICRVRHSPAFLMLVAE-VGDEIVGMIRGCIKTVTCGKRI 96 (419)
Q Consensus 21 IR~~~~~~Dl~~I~eL~~~~e---~~~~g~~~l~~~~~~d~i~ri~~~p~~~~lVAe-~dgeiVG~i~~~~~~~~~g~~~ 96 (419)
||+++ ++|++.+.++.+... ...+.......+.....+......+....+++. .+|++||++.+.....
T Consensus 1 IR~~~-~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~iiG~~~~~~~~~------ 73 (155)
T PF13420_consen 1 IRPAT-EEDLEEILKLYNEPRHEYFFTFEYPEDSEESFERWIESIIDSSKQRLFLVAEEDGKIIGYVSLRDIDP------ 73 (155)
T ss_dssp EEE---GGGHHHHHHHHHHHHHHTSSSSCSSHS-HHHHHHHHHHHHHHHTTEEEEEEECTTEEEEEEEEEESSS------
T ss_pred CCCCc-HHHHHHHHHHHhhhhhcceeEecCCCCCHHHHHHHHHHhcccCCCcEEEEEEcCCcEEEEEEEEeeec------
Confidence 79999 999999999987642 111111111111222223333112224455544 4999999986663321
Q ss_pred ccccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHH-HHcCCcEEEEEEccCChHHHHHHHHhC
Q 014721 97 SRNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWF-RESGVEYSYIATENDNYASVKLFTDKC 175 (419)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a-~~~G~~~i~l~t~~~N~~s~~lFY~K~ 175 (419)
....+. .++.|.|+||++|+|+.|+..+++++ ++.|++.+++.+...|.+|++ ||+|+
T Consensus 74 -------------------~~~~~~-~~~~v~~~~~~~gig~~l~~~l~~~af~~~~~~~i~~~v~~~N~~~i~-~~~~~ 132 (155)
T PF13420_consen 74 -------------------YNHTAE-LSIYVSPDYRGKGIGRKLLDELIEYAFKELGIHKIYLEVFSSNEKAIN-FYKKL 132 (155)
T ss_dssp -------------------GTTEEE-EEEEEEGGGTTSSHHHHHHHHHHHHH-HHTT-CEEEEEEETT-HHHHH-HHHHT
T ss_pred -------------------cCCEEE-EeeEEChhHCCCcHHHHHHHHHHHHhhhccCeEEEEEEEecCCHHHHH-HHHhC
Confidence 223444 44778899999999999999999999 899999999999999999999 59999
Q ss_pred CCEEeeecee
Q 014721 176 GYSKFRTPSI 185 (419)
Q Consensus 176 GF~~~~~~~~ 185 (419)
||+..++...
T Consensus 133 GF~~~g~~~~ 142 (155)
T PF13420_consen 133 GFEEEGELKD 142 (155)
T ss_dssp TEEEEEEEEE
T ss_pred CCEEEEEEec
Confidence 9999988543
No 27
>PLN02825 amino-acid N-acetyltransferase
Probab=99.39 E-value=4.3e-12 Score=132.98 Aligned_cols=122 Identities=19% Similarity=0.141 Sum_probs=91.8
Q ss_pred EEEECCCcCcHHHHHHHHHHHccCCCCCcchhhhhccChhhhhhcCCCcEEEEEEECCeEEEEEEeEeeecccCcccccc
Q 014721 20 VVREFDPNKDCLGVEDVERRCEVGPSGKLCLFTDLLGDPICRVRHSPAFLMLVAEVGDEIVGMIRGCIKTVTCGKRISRN 99 (419)
Q Consensus 20 ~IR~~~~~~Dl~~I~eL~~~~e~~~~g~~~l~~~~~~d~i~ri~~~p~~~~lVAe~dgeiVG~i~~~~~~~~~g~~~~~~ 99 (419)
.||+++ .+|++.|.+|++..+........ ..+. +.... ..++|++.||++|||+......
T Consensus 369 ~IR~At-~eDi~~I~~Li~~lee~g~lv~r-s~e~-------le~ei-~~f~V~e~Dg~IVG~aal~~~~---------- 428 (515)
T PLN02825 369 GTRMAR-VEDLAGIRQIIRPLEESGILVRR-TDEE-------LLRAL-DSFVVVEREGSIIACAALFPFF---------- 428 (515)
T ss_pred hheeCC-HHHHHHHHHHHHHHHHcCCCcCC-CHHH-------HHhcC-CcEEEEEECCEEEEEEEEEeec----------
Confidence 499999 99999999999887533211100 0111 11111 3488999999999998654322
Q ss_pred cccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChHHHHHHHHhCCCEE
Q 014721 100 TKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYASVKLFTDKCGYSK 179 (419)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~lFY~K~GF~~ 179 (419)
..+.++|..++|+|+|||+|+|++|+++++++++++|++.+++.+. .+.+ ||+|+||+.
T Consensus 429 ----------------~~~~aEI~~laV~P~yRGkGiG~~LL~~le~~Ar~~G~~~L~Lltt----~a~~-fY~k~GF~~ 487 (515)
T PLN02825 429 ----------------EEKCGEVAAIAVSPECRGQGQGDKLLDYIEKKAASLGLEKLFLLTT----RTAD-WFVRRGFSE 487 (515)
T ss_pred ----------------CCCcEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEeC----cHHH-HHHHCCCEE
Confidence 1146789999999999999999999999999999999999998773 3455 799999998
Q ss_pred eee
Q 014721 180 FRT 182 (419)
Q Consensus 180 ~~~ 182 (419)
...
T Consensus 488 ~~~ 490 (515)
T PLN02825 488 CSI 490 (515)
T ss_pred eCh
Confidence 776
No 28
>TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase. Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species.
Probab=99.39 E-value=9.6e-12 Score=121.69 Aligned_cols=141 Identities=16% Similarity=0.116 Sum_probs=97.0
Q ss_pred ccEEEEECCCcCcHHHHHHHHHHHccCCCCCcchhhhhccChhhhhhcCCCcEEEEEEE--CCeEEEEEEeEeeecccCc
Q 014721 17 RNIVVREFDPNKDCLGVEDVERRCEVGPSGKLCLFTDLLGDPICRVRHSPAFLMLVAEV--GDEIVGMIRGCIKTVTCGK 94 (419)
Q Consensus 17 ~~l~IR~~~~~~Dl~~I~eL~~~~e~~~~g~~~l~~~~~~d~i~ri~~~p~~~~lVAe~--dgeiVG~i~~~~~~~~~g~ 94 (419)
..+++|++++..|.+.+.++.+..+...+....+..+.+..-.......+ ..++++.+ +|++||++......
T Consensus 148 ~g~~~r~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~a~~~~~~~~vG~~~~~~~~----- 221 (292)
T TIGR03448 148 DGVTVRAYVGAPDDAEWLRVNNAAFAWHPEQGGWTRADLAERRAEPWFDP-AGLFLAFDDAPGELLGFHWTKVHP----- 221 (292)
T ss_pred CCeEeeccCCCcchHHHHHHHHHHhhCCCccCCcCHHHHHHHhhCcCCCc-CceEEEEECCCCcEEEEEEEEecC-----
Confidence 46889999734688888888777764332211111111111000000113 33677766 58999986433211
Q ss_pred ccccccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChHHHHHHHHh
Q 014721 95 RISRNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYASVKLFTDK 174 (419)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~lFY~K 174 (419)
.....++|..+.|+|+|||+|||++|++.+++++++.|+..+.+.+..+|.+|++ ||+|
T Consensus 222 --------------------~~~~~~~i~~~~V~p~~rg~GiG~~ll~~~~~~~~~~g~~~v~l~v~~~N~~a~~-~y~k 280 (292)
T TIGR03448 222 --------------------DEPALGEVYVVGVDPAAQGRGLGDALTLIGLHHLAARGLPAVMLYVEADNEAAVR-TYEK 280 (292)
T ss_pred --------------------CCCceeEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEeCCCHHHHH-HHHH
Confidence 0113467777899999999999999999999999999999999999999999999 5999
Q ss_pred CCCEEeeece
Q 014721 175 CGYSKFRTPS 184 (419)
Q Consensus 175 ~GF~~~~~~~ 184 (419)
+||+...+..
T Consensus 281 ~GF~~~~~~~ 290 (292)
T TIGR03448 281 LGFTVAEVDV 290 (292)
T ss_pred cCCEEccccc
Confidence 9999877643
No 29
>COG1247 Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane]
Probab=99.39 E-value=7.4e-12 Score=112.79 Aligned_cols=142 Identities=20% Similarity=0.237 Sum_probs=101.9
Q ss_pred EEEEECCCcCcHHHHHHHHHHHccCCCCCcchhhhhccChhhhhhc-CC-CcEEEEEEEC-CeEEEEEEeEeeecccCcc
Q 014721 19 IVVREFDPNKDCLGVEDVERRCEVGPSGKLCLFTDLLGDPICRVRH-SP-AFLMLVAEVG-DEIVGMIRGCIKTVTCGKR 95 (419)
Q Consensus 19 l~IR~~~~~~Dl~~I~eL~~~~e~~~~g~~~l~~~~~~d~i~ri~~-~p-~~~~lVAe~d-geiVG~i~~~~~~~~~g~~ 95 (419)
+.||+++ .+|++.|.++.+..-...........-.++...++... .. ....+|++.+ |+++|++........
T Consensus 2 ~~ir~~~-~~Dl~~I~~IY~~~v~~~~a~~e~~~~~~~~~~~~~~~~~~~g~p~~V~~~~~g~v~G~a~~~~fr~r---- 76 (169)
T COG1247 2 MEIRPAT-AADLEAILEIYNGAVENTAATFEEDPVSLEERAAWFSGRTRDGYPVVVAEEEDGKVLGYASAGPFRER---- 76 (169)
T ss_pred cEEecCh-HHhHHHHHHHHHHhhhcceEEEeccCCCHHHHHHHHHhcccCCceEEEEEcCCCeEEEEEEeeeccCc----
Confidence 5699999 99999999999887322211000000011111122211 11 1357788765 999999977655433
Q ss_pred cccccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChHHHHHHHHhC
Q 014721 96 ISRNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYASVKLFTDKC 175 (419)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~lFY~K~ 175 (419)
+.|. ...-..+.|+|++||+|||++|++.+++.++++|+..+...+..+|.+|+++ .+++
T Consensus 77 ------------------~ay~-~tve~SiYv~~~~~g~GiG~~Ll~~Li~~~~~~g~~~lva~I~~~n~aSi~l-h~~~ 136 (169)
T COG1247 77 ------------------PAYR-HTVELSIYLDPAARGKGLGKKLLQALITEARALGVRELVAGIESDNLASIAL-HEKL 136 (169)
T ss_pred ------------------cccc-eEEEEEEEECcccccccHHHHHHHHHHHHHHhCCeEEEEEEEcCCCcHhHHH-HHHC
Confidence 3333 3344788999999999999999999999999999999999999999999997 7999
Q ss_pred CCEEeeecee
Q 014721 176 GYSKFRTPSI 185 (419)
Q Consensus 176 GF~~~~~~~~ 185 (419)
||+..++...
T Consensus 137 GF~~~G~~~~ 146 (169)
T COG1247 137 GFEEVGTFPE 146 (169)
T ss_pred CCEEeccccc
Confidence 9999998543
No 30
>COG1246 ArgA N-acetylglutamate synthase and related acetyltransferases [Amino acid transport and metabolism]
Probab=99.36 E-value=6.2e-12 Score=110.52 Aligned_cols=119 Identities=18% Similarity=0.211 Sum_probs=91.8
Q ss_pred EEEECCCcCcHHHHHHHHHHHccCC---CCCcchhhhhccChhhhhhcCCCcEEEEEEECCeEEEEEEeEeeecccCccc
Q 014721 20 VVREFDPNKDCLGVEDVERRCEVGP---SGKLCLFTDLLGDPICRVRHSPAFLMLVAEVGDEIVGMIRGCIKTVTCGKRI 96 (419)
Q Consensus 20 ~IR~~~~~~Dl~~I~eL~~~~e~~~---~g~~~l~~~~~~d~i~ri~~~p~~~~lVAe~dgeiVG~i~~~~~~~~~g~~~ 96 (419)
.||.++ .+|++.|.+|.+..+... ........+.+ ..|.+++.+|.+||++.....
T Consensus 2 ~iR~A~-~~Di~~I~~Li~~~~~~gil~~rs~~~le~~i------------~dF~i~E~~g~viGC~aL~~~-------- 60 (153)
T COG1246 2 QIRKAR-ISDIPAILELIRPLELQGILLRRSREQLEEEI------------DDFTIIERDGKVIGCAALHPV-------- 60 (153)
T ss_pred ceeecc-ccchHHHHHHHHHHhhccccchhhHHHHHHHH------------hhheeeeeCCcEEEEEeeccc--------
Confidence 489999 999999999988875421 00001111122 337899999999999855421
Q ss_pred ccccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChHHHHHHHHhCC
Q 014721 97 SRNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYASVKLFTDKCG 176 (419)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~lFY~K~G 176 (419)
...+.+.|..|+|+|+|||+|+|..|+++++..|++.|++.+++.|... . -|++++|
T Consensus 61 ------------------~~~~~gE~~~laV~pd~r~~G~G~~Ll~~~~~~Ar~~gi~~lf~LTt~~----~-~~F~~~G 117 (153)
T COG1246 61 ------------------LEEDLGELRSLAVHPDYRGSGRGERLLERLLADARELGIKELFVLTTRS----P-EFFAERG 117 (153)
T ss_pred ------------------CccCeeeEEEEEECHHhcCCCcHHHHHHHHHHHHHHcCCceeeeeeccc----H-HHHHHcC
Confidence 1337899999999999999999999999999999999999999988622 2 2789999
Q ss_pred CEEeee
Q 014721 177 YSKFRT 182 (419)
Q Consensus 177 F~~~~~ 182 (419)
|+.+..
T Consensus 118 F~~vd~ 123 (153)
T COG1246 118 FTRVDK 123 (153)
T ss_pred CeECcc
Confidence 997765
No 31
>PRK05279 N-acetylglutamate synthase; Validated
Probab=99.33 E-value=1.3e-11 Score=128.34 Aligned_cols=124 Identities=19% Similarity=0.147 Sum_probs=90.5
Q ss_pred EEEEECCCcCcHHHHHHHHHHHccCCCCCcchhhhhccChhhhhhcCCCcEEEEEEECCeEEEEEEeEeeecccCccccc
Q 014721 19 IVVREFDPNKDCLGVEDVERRCEVGPSGKLCLFTDLLGDPICRVRHSPAFLMLVAEVGDEIVGMIRGCIKTVTCGKRISR 98 (419)
Q Consensus 19 l~IR~~~~~~Dl~~I~eL~~~~e~~~~g~~~l~~~~~~d~i~ri~~~p~~~~lVAe~dgeiVG~i~~~~~~~~~g~~~~~ 98 (419)
+.||+++ ++|++++.+|........+... .. ...+.... ..++++++++++||++......
T Consensus 295 ~~IR~at-~~D~~~I~~L~~~~~~~~~~~~-~~-------~~~l~~~~-~~~~va~~dg~iVG~~~~~~~~--------- 355 (441)
T PRK05279 295 EQLRRAT-IDDVGGILELIRPLEEQGILVR-RS-------REQLEREI-DKFTVIERDGLIIGCAALYPFP--------- 355 (441)
T ss_pred HHeEeCC-HHHHHHHHHHHHHHHHcCCccc-cC-------HHHHhccc-CcEEEEEECCEEEEEEEEEEcC---------
Confidence 6799999 9999999999865422211100 00 11111112 3467888899999998554321
Q ss_pred ccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChHHHHHHHHhCCCE
Q 014721 99 NTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYASVKLFTDKCGYS 178 (419)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~lFY~K~GF~ 178 (419)
....++|..++|+|+|||+|+|++|+++++++++++|+..+++.+ ..++. ||+|+||+
T Consensus 356 -----------------~~~~~~I~~l~V~p~~Rg~GiG~~Ll~~l~~~a~~~g~~~l~l~~----~~a~~-fY~k~GF~ 413 (441)
T PRK05279 356 -----------------EEKMGEMACLAVHPDYRGSGRGERLLKRIEQRARQLGLKRLFVLT----TRTAH-WFLERGFV 413 (441)
T ss_pred -----------------CCCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEec----chHHH-HHHHCcCE
Confidence 114578999999999999999999999999999999999887653 34566 79999999
Q ss_pred Eeeec
Q 014721 179 KFRTP 183 (419)
Q Consensus 179 ~~~~~ 183 (419)
..+..
T Consensus 414 ~~g~~ 418 (441)
T PRK05279 414 PVDVD 418 (441)
T ss_pred ECChh
Confidence 98873
No 32
>PRK10514 putative acetyltransferase; Provisional
Probab=99.32 E-value=1.3e-11 Score=107.77 Aligned_cols=124 Identities=19% Similarity=0.174 Sum_probs=84.0
Q ss_pred EEEEECCCcCcHHHHHHHHHHHccCCCCCc-chhhhhccChhhhhhcCCCcEEEEE-EECCeEEEEEEeEeeecccCccc
Q 014721 19 IVVREFDPNKDCLGVEDVERRCEVGPSGKL-CLFTDLLGDPICRVRHSPAFLMLVA-EVGDEIVGMIRGCIKTVTCGKRI 96 (419)
Q Consensus 19 l~IR~~~~~~Dl~~I~eL~~~~e~~~~g~~-~l~~~~~~d~i~ri~~~p~~~~lVA-e~dgeiVG~i~~~~~~~~~g~~~ 96 (419)
+.||+++ ++|.+++.+++..+........ ....+.+...+++.. +....+++ +.++++||++....
T Consensus 2 ~~ir~~~-~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~iG~~~~~~--------- 69 (145)
T PRK10514 2 ISIRRSR-HEEGERLVAIWRRSVDATHDFLSAEDRAEIEELVRSFL--PEAPLWVAVDERDQPVGFMLLSG--------- 69 (145)
T ss_pred ceeeecc-hhhHHHHHHHHHHHHHHhCcccCchhHHHHHHHHHHHh--ccCceEEEEecCCcEEEEEEEec---------
Confidence 5699999 9999999999987632111100 001111111122221 22224444 45789999875320
Q ss_pred ccccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChHHHHHHHHhCC
Q 014721 97 SRNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYASVKLFTDKCG 176 (419)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~lFY~K~G 176 (419)
.++.++.|+|+|||+|||++|++.+++.+ ..+.+.+...|.+|++ ||+|+|
T Consensus 70 -----------------------~~~~~~~v~p~~rgkGig~~Ll~~~~~~~-----~~i~~~v~~~N~~a~~-~yek~G 120 (145)
T PRK10514 70 -----------------------GHMEALFVDPDVRGCGVGRMLVEHALSLH-----PELTTDVNEQNEQAVG-FYKKMG 120 (145)
T ss_pred -----------------------CcEeEEEECHHhccCCHHHHHHHHHHHhc-----cccEEEeecCCHHHHH-HHHHCC
Confidence 12456889999999999999999999864 3567888999999999 599999
Q ss_pred CEEeeec
Q 014721 177 YSKFRTP 183 (419)
Q Consensus 177 F~~~~~~ 183 (419)
|+..++.
T Consensus 121 f~~~~~~ 127 (145)
T PRK10514 121 FKVTGRS 127 (145)
T ss_pred CEEeccc
Confidence 9998773
No 33
>PRK10562 putative acetyltransferase; Provisional
Probab=99.30 E-value=5.2e-11 Score=104.50 Aligned_cols=122 Identities=18% Similarity=0.219 Sum_probs=84.9
Q ss_pred EEECCCcCcHHHHHHHHHHHccCCCCCcchhhhhccChhhhhhc--CCCcEEEEEEECCeEEEEEEeEeeecccCccccc
Q 014721 21 VREFDPNKDCLGVEDVERRCEVGPSGKLCLFTDLLGDPICRVRH--SPAFLMLVAEVGDEIVGMIRGCIKTVTCGKRISR 98 (419)
Q Consensus 21 IR~~~~~~Dl~~I~eL~~~~e~~~~g~~~l~~~~~~d~i~ri~~--~p~~~~lVAe~dgeiVG~i~~~~~~~~~g~~~~~ 98 (419)
||+++ .+|++.+.+|+............ .....+....+.+ .+....+++..+|++||++....
T Consensus 2 ir~~~-~~D~~~i~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~iG~~~~~~----------- 67 (145)
T PRK10562 2 IREYQ-PSDLPAILQLWLESTIWAHPFIK--EQYWRESAPLVRDVYLPAAQTWVWEEDGKLLGFVSVLE----------- 67 (145)
T ss_pred ccccc-chhhHHHHHHHHHhccccCCCCC--HHHHHHhHHHhhhhhcCcccEEEEEECCEEEEEEEEee-----------
Confidence 78999 99999999998776432111110 0111111111111 13334677778899999985431
Q ss_pred ccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChHHHHHHHHhCCCE
Q 014721 99 NTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYASVKLFTDKCGYS 178 (419)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~lFY~K~GF~ 178 (419)
...|..+.|+|+|||+|+|+.|++.+++. +..+.+.+..+|.+|++ ||+|+||+
T Consensus 68 --------------------~~~i~~~~v~~~~rg~G~g~~ll~~~~~~-----~~~~~~~v~~~N~~s~~-~y~k~Gf~ 121 (145)
T PRK10562 68 --------------------GRFVGALFVAPKAVRRGIGKALMQHVQQR-----YPHLSLEVYQKNQRAVN-FYHAQGFR 121 (145)
T ss_pred --------------------ccEEEEEEECHHHcCCCHHHHHHHHHHhh-----CCeEEEEEEcCChHHHH-HHHHCCCE
Confidence 12456689999999999999999998874 35677888899999999 59999999
Q ss_pred Eeee
Q 014721 179 KFRT 182 (419)
Q Consensus 179 ~~~~ 182 (419)
..++
T Consensus 122 ~~~~ 125 (145)
T PRK10562 122 IVDS 125 (145)
T ss_pred Eccc
Confidence 9886
No 34
>PRK15130 spermidine N1-acetyltransferase; Provisional
Probab=99.30 E-value=4.5e-11 Score=109.22 Aligned_cols=139 Identities=15% Similarity=0.160 Sum_probs=97.4
Q ss_pred cccEEEEECCCcCcHHHHHHHHHHHcc-CCCCCcc--hhhhhccChhhhhhcCCCcEEEEEEECCeEEEEEEeEeeeccc
Q 014721 16 MRNIVVREFDPNKDCLGVEDVERRCEV-GPSGKLC--LFTDLLGDPICRVRHSPAFLMLVAEVGDEIVGMIRGCIKTVTC 92 (419)
Q Consensus 16 ~~~l~IR~~~~~~Dl~~I~eL~~~~e~-~~~g~~~--l~~~~~~d~i~ri~~~p~~~~lVAe~dgeiVG~i~~~~~~~~~ 92 (419)
+..+++|+++ ++|++.+.++....+. ..+.... .+.+. ...+.+....+....+++..+|++||++.......
T Consensus 4 ~~~l~lR~~~-~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~g~~iG~~~~~~~~~-- 79 (186)
T PRK15130 4 AHSVKLRPLE-REDLRFVHQLDNNASVMRYWFEEPYEAFVEL-SDLYDKHIHDQSERRFVVECDGEKAGLVELVEINH-- 79 (186)
T ss_pred CCeeEEecCC-HHHHHHHHHHhcChHHHhhcCCcccccHHHH-HHHHHHhhhcccCcEEEEEECCEEEEEEEEEeecC--
Confidence 4557899999 9999999998654421 1111001 11111 01122333334445677788999999986543321
Q ss_pred CcccccccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHH-cCCcEEEEEEccCChHHHHHH
Q 014721 93 GKRISRNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRE-SGVEYSYIATENDNYASVKLF 171 (419)
Q Consensus 93 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~-~G~~~i~l~t~~~N~~s~~lF 171 (419)
..+.+. .++.|+|+|||+|+|+++++.+++++.+ .|...+.+.+..+|.+|+++
T Consensus 80 -----------------------~~~~~~-~~~~v~~~~~g~G~g~~l~~~l~~~~~~~~~~~rv~~~v~~~N~~s~~~- 134 (186)
T PRK15130 80 -----------------------VHRRAE-FQIIISPEYQGKGLATRAAKLAMDYGFTVLNLYKLYLIVDKENEKAIHI- 134 (186)
T ss_pred -----------------------CCCeEE-EEEEECHHHcCCCHHHHHHHHHHHHHhhcCCceEEEEEEccCCHHHHHH-
Confidence 112333 4689999999999999999999999986 59999999999999999995
Q ss_pred HHhCCCEEeeec
Q 014721 172 TDKCGYSKFRTP 183 (419)
Q Consensus 172 Y~K~GF~~~~~~ 183 (419)
|+|+||+..+..
T Consensus 135 yek~GF~~~~~~ 146 (186)
T PRK15130 135 YRKLGFEVEGEL 146 (186)
T ss_pred HHHCCCEEEEEE
Confidence 999999988774
No 35
>PF13508 Acetyltransf_7: Acetyltransferase (GNAT) domain; PDB: 3EY5_A 3FRM_B 3D8P_B 3GY9_A 3GYA_A 3S6F_A 2Q7B_A 1CM0_B 1XEB_B 1Y7R_A ....
Probab=99.30 E-value=4.7e-11 Score=93.98 Aligned_cols=77 Identities=38% Similarity=0.474 Sum_probs=61.3
Q ss_pred cEEEEEEECCeEEEEEEeEeeecccCcccccccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHH
Q 014721 68 FLMLVAEVGDEIVGMIRGCIKTVTCGKRISRNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEW 147 (419)
Q Consensus 68 ~~~lVAe~dgeiVG~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~ 147 (419)
+.++++++++++||++..... ....+|..++|+|+|||+|||++|++.+++.
T Consensus 3 ~~~~~~~~~~~ivG~~~~~~~----------------------------~~~~~i~~~~v~~~~rg~Gig~~ll~~~~~~ 54 (79)
T PF13508_consen 3 ERFFVAEDDGEIVGFIRLWPN----------------------------EDFAYIGYLAVDPEYRGKGIGSKLLNYLLEK 54 (79)
T ss_dssp EEEEEEEETTEEEEEEEEEET----------------------------TTEEEEEEEEE-GGGTTSSHHHHHHHHHHHH
T ss_pred cEEEEEEECCEEEEEEEEEEc----------------------------CCEEEEEEEEECHHHcCCCHHHHHHHHHHHH
Confidence 458899999999999876322 1467999999999999999999999999888
Q ss_pred HHHcCCcEEEEEEccCChHHHHHHHHhCCCEE
Q 014721 148 FRESGVEYSYIATENDNYASVKLFTDKCGYSK 179 (419)
Q Consensus 148 a~~~G~~~i~l~t~~~N~~s~~lFY~K~GF~~ 179 (419)
+. ...+++.+ +..+.. ||+|+||++
T Consensus 55 ~~---~~~i~l~~---~~~~~~-fY~~~GF~~ 79 (79)
T PF13508_consen 55 AK---SKKIFLFT---NPAAIK-FYEKLGFEE 79 (79)
T ss_dssp HT---CSEEEEEE---EHHHHH-HHHHTTEEE
T ss_pred cC---CCcEEEEE---cHHHHH-HHHHCcCCC
Confidence 83 35566665 455565 799999985
No 36
>TIGR01890 N-Ac-Glu-synth amino-acid N-acetyltransferase. This model represents a clade of amino-acid N-acetyltransferases acting mainly on glutamate in the first step of the "acetylated" ornithine biosynthesis pathway. For this reason it is also called N-acetylglutamate synthase. The enzyme may also act on aspartate.
Probab=99.30 E-value=2.6e-11 Score=125.70 Aligned_cols=124 Identities=17% Similarity=0.159 Sum_probs=90.3
Q ss_pred EEEEECCCcCcHHHHHHHHHHHccCCCCCcchhhhhccChhhhhhcCCCcEEEEEEECCeEEEEEEeEeeecccCccccc
Q 014721 19 IVVREFDPNKDCLGVEDVERRCEVGPSGKLCLFTDLLGDPICRVRHSPAFLMLVAEVGDEIVGMIRGCIKTVTCGKRISR 98 (419)
Q Consensus 19 l~IR~~~~~~Dl~~I~eL~~~~e~~~~g~~~l~~~~~~d~i~ri~~~p~~~~lVAe~dgeiVG~i~~~~~~~~~g~~~~~ 98 (419)
+.||+++ ++|++++.+|.+......+.. ....+.+ .. +...+++++.+|++||++......
T Consensus 283 ~~IR~at-~~Dl~~I~~L~~~~~~~~~~~-~~~~~~l-------~~-~~~~~~V~~~dg~iVG~~~~~~~~--------- 343 (429)
T TIGR01890 283 ESIRQAT-IDDIGGIAALIRPLEEQGILV-RRSREYL-------ER-EISEFSIIEHDGNIIGCAALYPYA--------- 343 (429)
T ss_pred hheEECC-HHHHHHHHHHHHHHHHcCCch-hhhHHHH-------Hh-hcCcEEEEEECCEEEEEEEEEecC---------
Confidence 4699999 999999999987553222110 1111111 11 123467888899999998665432
Q ss_pred ccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChHHHHHHHHhCCCE
Q 014721 99 NTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYASVKLFTDKCGYS 178 (419)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~lFY~K~GF~ 178 (419)
....++|..++|+|+|||+|+|++|+++++++++++|++.+++.+ .| +.+ ||+|+||+
T Consensus 344 -----------------~~~~~~I~~l~V~p~~Rg~GiG~~Ll~~l~~~A~~~G~~~l~v~~--~~--a~~-fY~k~GF~ 401 (429)
T TIGR01890 344 -----------------EEDCGEMACLAVSPEYQDGGRGERLLAHIEDRARQMGISRLFVLT--TR--TGH-WFRERGFQ 401 (429)
T ss_pred -----------------CCCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEee--cc--hHH-HHHHCCCE
Confidence 114578889999999999999999999999999999999876543 33 345 79999999
Q ss_pred Eeeec
Q 014721 179 KFRTP 183 (419)
Q Consensus 179 ~~~~~ 183 (419)
..+..
T Consensus 402 ~~g~~ 406 (429)
T TIGR01890 402 TASVD 406 (429)
T ss_pred ECChh
Confidence 98773
No 37
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=99.28 E-value=5.2e-11 Score=118.78 Aligned_cols=126 Identities=13% Similarity=0.123 Sum_probs=92.4
Q ss_pred EEEEECCCcCcHHHHHHHHHHHccCCCCCcchhhhhccChhhhhhcCCCcEEEEEE--E---CCeEEEEEEeEeeecccC
Q 014721 19 IVVREFDPNKDCLGVEDVERRCEVGPSGKLCLFTDLLGDPICRVRHSPAFLMLVAE--V---GDEIVGMIRGCIKTVTCG 93 (419)
Q Consensus 19 l~IR~~~~~~Dl~~I~eL~~~~e~~~~g~~~l~~~~~~d~i~ri~~~p~~~~lVAe--~---dgeiVG~i~~~~~~~~~g 93 (419)
++||+++ ++|++.|.+|.+.+...+.....+.... +......+ . .+++. + ++.+||++......
T Consensus 187 ~~Ir~a~-~~Dl~ri~~L~~~tnqfn~~~~~~s~~~----i~~~l~~~-~-~~~~~~~d~~gd~givG~~~~~~~~---- 255 (320)
T TIGR01686 187 LNISKND-EQNVQRVEELLGRTNQFNATYTRLNQED----VAQHMQKE-E-IVTVSMSDRFGDSGIIGIFVFEKKE---- 255 (320)
T ss_pred EEEEECC-hhhhHHHHHHHHhHHhhhccCccCCHHH----HHHHhcCC-C-EEEEEEEecCCCCceEEEEEEEecC----
Confidence 6799999 9999999999988733322111111111 22222223 2 34333 2 56899998654221
Q ss_pred cccccccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEc--cCChHHHHHH
Q 014721 94 KRISRNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATE--NDNYASVKLF 171 (419)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~--~~N~~s~~lF 171 (419)
..++|..+.|+|.+||+|||++|++++++.+++.|++.+.+.+. ..|.+|+. |
T Consensus 256 ------------------------~~~~I~~l~vs~r~~grGig~~Ll~~l~~~a~~~G~~~i~l~v~~~~~N~~A~~-f 310 (320)
T TIGR01686 256 ------------------------GNLFIDDLCMSCRALGRGVETRMLRWLFEQALDLGNHNARLYYRRTERNMPFLS-F 310 (320)
T ss_pred ------------------------CcEEEEEEEEcHhHhcCcHHHHHHHHHHHHHHHcCCCeEEEEEeeCCCchHHHH-H
Confidence 35689999999999999999999999999999999999999874 58999998 7
Q ss_pred HHhCCCEEe
Q 014721 172 TDKCGYSKF 180 (419)
Q Consensus 172 Y~K~GF~~~ 180 (419)
|+|+||+..
T Consensus 311 Y~~~GF~~~ 319 (320)
T TIGR01686 311 YEQIGFEDE 319 (320)
T ss_pred HHHcCCccC
Confidence 999999853
No 38
>PRK10151 ribosomal-protein-L7/L12-serine acetyltransferase; Provisional
Probab=99.27 E-value=1.5e-10 Score=105.01 Aligned_cols=140 Identities=14% Similarity=0.121 Sum_probs=96.3
Q ss_pred cccEEEEECCCcCcHHHHHHHHHHHcc-----CCCCCcchhhhhccChhhhhh---cCCCcEEEEEEECCeEEEEEEeEe
Q 014721 16 MRNIVVREFDPNKDCLGVEDVERRCEV-----GPSGKLCLFTDLLGDPICRVR---HSPAFLMLVAEVGDEIVGMIRGCI 87 (419)
Q Consensus 16 ~~~l~IR~~~~~~Dl~~I~eL~~~~e~-----~~~g~~~l~~~~~~d~i~ri~---~~p~~~~lVAe~dgeiVG~i~~~~ 87 (419)
...+.+|+++ ++|++.+.++...... ..+.......+.....+.+.. .......++++.+|++||++....
T Consensus 8 t~rl~Lr~~~-~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~iG~~~l~~ 86 (179)
T PRK10151 8 SESLELHAVD-ESHVTPLHQLVCKNKTWLQQSLNWPQFVQSEEDTRKTVQGNVMLHQRGYAKMFMIFKEDELIGVLSFNR 86 (179)
T ss_pred CCcEEEEeCC-HHHHHHHHHHHHHhHHHHHhcCCCcCccCCHHHHHHHHHHHHHHHhcCCcEEEEEEECCEEEEEEEEEe
Confidence 3558899999 9999999999854421 111111011111122222221 112123577777899999986543
Q ss_pred eecccCcccccccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHc-CCcEEEEEEccCChH
Q 014721 88 KTVTCGKRISRNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRES-GVEYSYIATENDNYA 166 (419)
Q Consensus 88 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~-G~~~i~l~t~~~N~~ 166 (419)
... ..+.+. .++.++|+|||+|+|+++++.+++++.+. |.+.+.+.+..+|.+
T Consensus 87 ~~~-------------------------~~~~~~-ig~~i~~~~~g~G~~tea~~~l~~~~~~~~~~~ri~~~v~~~N~~ 140 (179)
T PRK10151 87 IEP-------------------------LNKTAY-IGYWLDESHQGQGIISQALQALIHHYAQSGELRRFVIKCRVDNPA 140 (179)
T ss_pred ecc-------------------------CCCceE-EEEEEChhhcCCcHHHHHHHHHHHHHHhhCCccEEEEEEcCCCHH
Confidence 221 112344 35679999999999999999999999864 899999999999999
Q ss_pred HHHHHHHhCCCEEeeec
Q 014721 167 SVKLFTDKCGYSKFRTP 183 (419)
Q Consensus 167 s~~lFY~K~GF~~~~~~ 183 (419)
|+++ |+|+||+..++.
T Consensus 141 S~~v-~ek~Gf~~~g~~ 156 (179)
T PRK10151 141 SNQV-ALRNGFTLEGCL 156 (179)
T ss_pred HHHH-HHHCCCEEEeEe
Confidence 9996 999999998874
No 39
>PRK10809 ribosomal-protein-S5-alanine N-acetyltransferase; Provisional
Probab=99.27 E-value=1.6e-10 Score=106.39 Aligned_cols=141 Identities=14% Similarity=0.128 Sum_probs=95.5
Q ss_pred cccEEEEECCCcCcHHHHHHHHHHH--ccCCCCCcc---h-hhhhcc---ChhhhhhcCCCcEEEEEE--ECCeEEEEEE
Q 014721 16 MRNIVVREFDPNKDCLGVEDVERRC--EVGPSGKLC---L-FTDLLG---DPICRVRHSPAFLMLVAE--VGDEIVGMIR 84 (419)
Q Consensus 16 ~~~l~IR~~~~~~Dl~~I~eL~~~~--e~~~~g~~~---l-~~~~~~---d~i~ri~~~p~~~~lVAe--~dgeiVG~i~ 84 (419)
...+.||+++ ++|.+.+.++.... ...++.... . ..+... ..+......+....+++. .++++||.+.
T Consensus 15 t~rl~LR~~~-~~Da~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~iG~i~ 93 (194)
T PRK10809 15 TDRLVVRLVH-ERDAWRLADYYAENRHFLKPWEPVRDESHCYPSGWQARLGMINEFHKQGSAFYFALLDPDEKEIIGVAN 93 (194)
T ss_pred cCcEEEEeCC-HHHHHHHHHHHHhCHHhccCCCCCCcccccCHHHHHHHHHHHHHHHhcCcEEEEEEEECCCCeEEEEEE
Confidence 4568899999 99999999987753 222221110 0 000000 111222223333344443 3689999987
Q ss_pred eEeeecccCcccccccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHH-cCCcEEEEEEccC
Q 014721 85 GCIKTVTCGKRISRNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRE-SGVEYSYIATEND 163 (419)
Q Consensus 85 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~-~G~~~i~l~t~~~ 163 (419)
...... + .......++.|+|+|||+|+|+.+++.+++++.+ .|++.+.+.+..+
T Consensus 94 l~~~~~--~-----------------------~~~~~eig~~i~~~~~G~G~~~ea~~~ll~~~~~~l~l~~i~~~v~~~ 148 (194)
T PRK10809 94 FSNVVR--G-----------------------SFHACYLGYSLGQKWQGQGLMFEALQAAIRYMQRQQHMHRIMANYMPH 148 (194)
T ss_pred EEeecC--C-----------------------CeeeEEEEEEECHHHcCCCHHHHHHHHHHHHHHhcCCceEEEEEeeCC
Confidence 653221 0 0112346688999999999999999999999987 4999999999999
Q ss_pred ChHHHHHHHHhCCCEEeeec
Q 014721 164 NYASVKLFTDKCGYSKFRTP 183 (419)
Q Consensus 164 N~~s~~lFY~K~GF~~~~~~ 183 (419)
|.+|+++ |+|+||+..+..
T Consensus 149 N~~S~~l-~ek~Gf~~~g~~ 167 (194)
T PRK10809 149 NKRSGDL-LARLGFEKEGYA 167 (194)
T ss_pred CHHHHHH-HHHCCCcEEeee
Confidence 9999996 999999987763
No 40
>PRK12308 bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional
Probab=99.27 E-value=5.3e-11 Score=128.54 Aligned_cols=123 Identities=21% Similarity=0.125 Sum_probs=90.1
Q ss_pred cEEEEECCCcCcHHHHHHHHHHHccCCCCCcchhhhhccChhhhhhcCCCcEEEEEEECCeEEEEEEeEeeecccCcccc
Q 014721 18 NIVVREFDPNKDCLGVEDVERRCEVGPSGKLCLFTDLLGDPICRVRHSPAFLMLVAEVGDEIVGMIRGCIKTVTCGKRIS 97 (419)
Q Consensus 18 ~l~IR~~~~~~Dl~~I~eL~~~~e~~~~g~~~l~~~~~~d~i~ri~~~p~~~~lVAe~dgeiVG~i~~~~~~~~~g~~~~ 97 (419)
.++||+++ ++|++.|.+|............... ..+.. +...++|++.+|++||++......
T Consensus 463 gm~IR~a~-~~D~~~I~~L~~~~~~~~~~~~~~~--------~~l~~-~~~~~~Va~~~g~IVG~~~l~~~~-------- 524 (614)
T PRK12308 463 GVKVRPAR-LTDIDAIEGMVAYWAGLGENLPRSR--------NELVR-DIGSFAVAEHHGEVTGCASLYIYD-------- 524 (614)
T ss_pred CCEEEECC-HHHHHHHHHHHHHHHhhhcccccCH--------HHHhc-ccCcEEEEEECCEEEEEEEEEEcC--------
Confidence 36799999 9999999999765432111111000 11111 123478889999999998655321
Q ss_pred cccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChHHHHHHHHhCCC
Q 014721 98 RNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYASVKLFTDKCGY 177 (419)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~lFY~K~GF 177 (419)
...++|..++|+|+|||+|||++|++++++++++.|++.+.+.+. + .+ ||+|+||
T Consensus 525 -------------------~~~~~I~~i~V~P~~rGkGIGk~Ll~~l~~~ak~~g~~~i~l~~~--a---~~-FYek~GF 579 (614)
T PRK12308 525 -------------------SGLAEIRSLGVEAGWQVQGQGSALVQYLVEKARQMAIKKVFVLTR--V---PE-FFMKQGF 579 (614)
T ss_pred -------------------CCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEeeC--c---HH-HHHHCCC
Confidence 134689999999999999999999999999999999999887642 2 34 8999999
Q ss_pred EEeeec
Q 014721 178 SKFRTP 183 (419)
Q Consensus 178 ~~~~~~ 183 (419)
+..+..
T Consensus 580 ~~~~~~ 585 (614)
T PRK12308 580 SPTSKS 585 (614)
T ss_pred EECCcc
Confidence 988863
No 41
>TIGR03585 PseH pseudaminic acid biosynthesis N-acetyl transferase. Sequences in this family are members of the pfam00583 (GNAT) superfamily of acetyltransferases and are proposed to perform a N-acetylation step in the process of pseudaminic acid biosynthesis in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci. Significantly, many genomes containing other components of this pathway lack this gene, indicating that some other N-acetyl transferases may be incolved and/or the step is optional, resulting in a non-acetylated pseudaminic acid variant sugar.
Probab=99.25 E-value=5.7e-11 Score=104.77 Aligned_cols=134 Identities=15% Similarity=0.113 Sum_probs=94.1
Q ss_pred EEECCCcCcHHHHHHHHHHHccCCCC--CcchhhhhccChhhhhhcCCCcEEEEEEECCeEEEEEEeEeeecccCccccc
Q 014721 21 VREFDPNKDCLGVEDVERRCEVGPSG--KLCLFTDLLGDPICRVRHSPAFLMLVAEVGDEIVGMIRGCIKTVTCGKRISR 98 (419)
Q Consensus 21 IR~~~~~~Dl~~I~eL~~~~e~~~~g--~~~l~~~~~~d~i~ri~~~p~~~~lVAe~dgeiVG~i~~~~~~~~~g~~~~~ 98 (419)
+|+++ ++|++.+.++....+...+. ......+....-+......+....+++..+|++||++.......
T Consensus 3 lr~~~-~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vG~~~~~~~~~-------- 73 (156)
T TIGR03585 3 FTPLN-SEELELVLEWRNHPDVRANMYSDHLIDWEEHLHFIEALKQDPNRRYWIVCQESRPIGVISFTDINL-------- 73 (156)
T ss_pred cccCC-HHHHHHHHHhhCCHHHHhhccCcCCCCHHHHHHHHHHhhcCCCceEEEEEECCEEEEEEEEEecCh--------
Confidence 78999 99999999986554322110 00011111111133334444455778888999999987653221
Q ss_pred ccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHH-cCCcEEEEEEccCChHHHHHHHHhCCC
Q 014721 99 NTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRE-SGVEYSYIATENDNYASVKLFTDKCGY 177 (419)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~-~G~~~i~l~t~~~N~~s~~lFY~K~GF 177 (419)
....+.+ ++.+.|++| +|||+++++.+++++.+ .|+..+.+.+...|.+|++ ||+|+||
T Consensus 74 -----------------~~~~~~~-g~~~~~~~~-~G~g~~~~~~~~~~a~~~~~~~~i~~~v~~~N~~s~~-~y~k~Gf 133 (156)
T TIGR03585 74 -----------------VHKSAFW-GIYANPFCK-PGVGSVLEEAALEYAFEHLGLHKLSLEVLEFNNKALK-LYEKFGF 133 (156)
T ss_pred -----------------hhCeEEE-EEEeChhhh-cCchHHHHHHHHHHHHhhCCeeEEEEEEeccCHHHHH-HHHHcCC
Confidence 0123443 455999999 99999999999999985 5999999999999999999 5999999
Q ss_pred EEeeec
Q 014721 178 SKFRTP 183 (419)
Q Consensus 178 ~~~~~~ 183 (419)
+..+..
T Consensus 134 ~~~g~~ 139 (156)
T TIGR03585 134 EREGVF 139 (156)
T ss_pred eEeeee
Confidence 998864
No 42
>PRK09831 putative acyltransferase; Provisional
Probab=99.25 E-value=4.3e-11 Score=105.45 Aligned_cols=123 Identities=17% Similarity=0.150 Sum_probs=81.5
Q ss_pred EEEECCCcCcHHHHHHHHHHHccCC--CCCcchhhhhccCh-hhhh-hcCCCcEEEEEEECCeEEEEEEeEeeecccCcc
Q 014721 20 VVREFDPNKDCLGVEDVERRCEVGP--SGKLCLFTDLLGDP-ICRV-RHSPAFLMLVAEVGDEIVGMIRGCIKTVTCGKR 95 (419)
Q Consensus 20 ~IR~~~~~~Dl~~I~eL~~~~e~~~--~g~~~l~~~~~~d~-i~ri-~~~p~~~~lVAe~dgeiVG~i~~~~~~~~~g~~ 95 (419)
.||+++ ++|++.+.++........ .....-....+... ...+ .......++|++.+|++||++...
T Consensus 2 ~ir~a~-~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~iiG~~~~~--------- 71 (147)
T PRK09831 2 QIRNYQ-PGDFQQLCAIFIRAVTMTASQHYSPQQIAAWAQIDESRWKEKLAKSQVRVAVINAQPVGFITCI--------- 71 (147)
T ss_pred ccccCC-hhhHHHHHHHHHHHHHHhhhhcCCHHHHHhccCCCHHHHHHHHhcCceEEEEECCEEEEEEEeh---------
Confidence 489999 999999999988762211 11000000011000 0000 111234578888899999997432
Q ss_pred cccccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChHHHHHHHHhC
Q 014721 96 ISRNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYASVKLFTDKC 175 (419)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~lFY~K~ 175 (419)
..++..+.|+|+|||+|||++|++++++.+.. + .+. .|..+++ ||+|+
T Consensus 72 -----------------------~~~i~~~~v~p~~~g~GiG~~Ll~~~~~~~~~-----l--~v~-~~~~a~~-~Y~k~ 119 (147)
T PRK09831 72 -----------------------EHYIDMLFVDPEYTRRGVASALLKPLIKSESE-----L--TVD-ASITAKP-FFERY 119 (147)
T ss_pred -----------------------hceeeeEEECHHHcCCCHHHHHHHHHHHHhhh-----e--Eee-cchhhHH-HHHHC
Confidence 12566788999999999999999999998865 2 332 3567788 69999
Q ss_pred CCEEeeece
Q 014721 176 GYSKFRTPS 184 (419)
Q Consensus 176 GF~~~~~~~ 184 (419)
||+..++..
T Consensus 120 Gf~~~g~~~ 128 (147)
T PRK09831 120 GFQTVKQQR 128 (147)
T ss_pred CCEEeeccc
Confidence 999998854
No 43
>PHA01807 hypothetical protein
Probab=99.24 E-value=1.4e-10 Score=103.62 Aligned_cols=126 Identities=9% Similarity=-0.024 Sum_probs=84.7
Q ss_pred CCCcCcHHHHHHHHHHHccCCCCCcch--hhhhccChhhhhhcCCCcEEEEEEECCeEEEEEEeEeeecccCcccccccc
Q 014721 24 FDPNKDCLGVEDVERRCEVGPSGKLCL--FTDLLGDPICRVRHSPAFLMLVAEVGDEIVGMIRGCIKTVTCGKRISRNTK 101 (419)
Q Consensus 24 ~~~~~Dl~~I~eL~~~~e~~~~g~~~l--~~~~~~d~i~ri~~~p~~~~lVAe~dgeiVG~i~~~~~~~~~g~~~~~~~~ 101 (419)
+. .+|++....|........+....+ ..+.... +......+....++++++|++||++.......
T Consensus 9 ~~-~~d~~~~~~l~l~~l~e~p~~~~w~s~ee~~~~-~~~~~~~~~~~~lva~~dg~lvG~~~l~~~~~----------- 75 (153)
T PHA01807 9 AK-AGTPSELQGLCWLAIQELEEFTLFRSKEEALER-ILDSTESNDRTELLVFRDGKLAGIAVLVFEDD----------- 75 (153)
T ss_pred hh-hCCHHHHHHHHHHHHHhCccCCCCCChHHHHHH-HHHHhhCCCceEEEEEECCEEEEEEEEEcCCC-----------
Confidence 45 788999888876662221110001 1111111 11111233455688888999999986553321
Q ss_pred cccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChHHHHHHHHhC
Q 014721 102 YTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYASVKLFTDKC 175 (419)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~lFY~K~ 175 (419)
..+.....+..|.|+|+|||+|||++|++.+++++++.|+..+.+.+..+|.+|+++ |++.
T Consensus 76 ------------~~~~~i~~l~~lYV~pe~RG~GiG~~Ll~~~~~~Ar~~G~~~l~l~v~~~n~~a~~~-y~~~ 136 (153)
T PHA01807 76 ------------PHVGPCLGVQWQYVLPEYRNAGVAREFLRELIRLAGEGNLPLIAFSHREGEGRYTIH-YRRV 136 (153)
T ss_pred ------------cceeeeccceeEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEecCCcHHHHHH-HHhc
Confidence 111122334447899999999999999999999999999999999999999999995 9864
No 44
>PRK10314 putative acyltransferase; Provisional
Probab=99.23 E-value=8.3e-11 Score=104.99 Aligned_cols=126 Identities=15% Similarity=0.074 Sum_probs=86.7
Q ss_pred EEECCCcCcHHHHHHHHHHHccCCCCCcchhhhhccChhhhhhcCCCcEEEEEEECCeEEEEEEeEeeecccCccccccc
Q 014721 21 VREFDPNKDCLGVEDVERRCEVGPSGKLCLFTDLLGDPICRVRHSPAFLMLVAEVGDEIVGMIRGCIKTVTCGKRISRNT 100 (419)
Q Consensus 21 IR~~~~~~Dl~~I~eL~~~~e~~~~g~~~l~~~~~~d~i~ri~~~p~~~~lVAe~dgeiVG~i~~~~~~~~~g~~~~~~~ 100 (419)
+..++ .+++.++..|....+....+... .+..++ ...+....+++.+++++||+++......
T Consensus 9 ~~~l~-~~~~~~~~~lR~~VF~~eq~~~~--~e~D~~-----d~~~~~~h~~~~~~~~~vg~~r~~~~~~---------- 70 (153)
T PRK10314 9 HSELS-VSQLYALLQLRCAVFVVEQNCPY--QDIDGD-----DLTGDNRHILGWKNDELVAYARILKSDD---------- 70 (153)
T ss_pred hhhCC-HHHHHHHHHHHHHHhhhhcCCCc--cccCCC-----CCCCCcEEEEEEECCEEEEEEEEecCCC----------
Confidence 35666 77788888887777655443221 111110 0001233556677999999987754321
Q ss_pred ccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHc-CCcEEEEEEccCChHHHHHHHHhCCCEE
Q 014721 101 KYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRES-GVEYSYIATENDNYASVKLFTDKCGYSK 179 (419)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~-G~~~i~l~t~~~N~~s~~lFY~K~GF~~ 179 (419)
....++|..++|+|+|||+|||++|++++++++++. +...+++.+ +..+.. ||+|+||+.
T Consensus 71 ---------------~~~~~~i~rv~V~~~~rG~GiG~~Lm~~~~~~~~~~~~~~~i~L~a---~~~a~~-fY~k~GF~~ 131 (153)
T PRK10314 71 ---------------DLEPVVIGRVIVSEALRGEKVGQQLMSKTLESCTRHWPDKPVYLGA---QAHLQN-FYQSFGFIP 131 (153)
T ss_pred ---------------CCCCEEEEEEEECHHHhCCCHHHHHHHHHHHHHHHHCCCCcEEEeh---HHHHHH-HHHHCCCEE
Confidence 113468999999999999999999999999999875 677777765 344555 799999999
Q ss_pred eeec
Q 014721 180 FRTP 183 (419)
Q Consensus 180 ~~~~ 183 (419)
.+..
T Consensus 132 ~g~~ 135 (153)
T PRK10314 132 VTEV 135 (153)
T ss_pred CCCc
Confidence 8873
No 45
>KOG3235 consensus Subunit of the major N alpha-acetyltransferase [General function prediction only]
Probab=99.21 E-value=4.7e-11 Score=104.43 Aligned_cols=133 Identities=20% Similarity=0.187 Sum_probs=98.5
Q ss_pred EEEEECCCcCcHHHHHHHHHHHccCCCCCcchhhhhccChhhhhhcCCCcEEEEEE-ECCeEEEEEEeEeeecccCcccc
Q 014721 19 IVVREFDPNKDCLGVEDVERRCEVGPSGKLCLFTDLLGDPICRVRHSPAFLMLVAE-VGDEIVGMIRGCIKTVTCGKRIS 97 (419)
Q Consensus 19 l~IR~~~~~~Dl~~I~eL~~~~e~~~~g~~~l~~~~~~d~i~ri~~~p~~~~lVAe-~dgeiVG~i~~~~~~~~~g~~~~ 97 (419)
+.||.++ ++|+-.+....-.|-..+.- +...+-.....| ...|||+ .+|+|||++.+.....+.
T Consensus 2 m~iR~ar-~~DL~~mQ~~Nl~~lpENyq--------mkyylyh~lswp-~lSyVA~D~~gkiVGYvlAkmee~p~----- 66 (193)
T KOG3235|consen 2 MNIRRAR-PDDLLEMQHCNLLNLPENYQ--------MKYYLYHGLSWP-QLSYVAEDENGKIVGYVLAKMEEDPD----- 66 (193)
T ss_pred cccccCC-HHHHHHhhhcccccCcHHHh--------HHHHHHhhcccc-cceEEEEcCCCcEEEEeeeehhhccc-----
Confidence 3499999 89988877765555333321 111122233334 6689998 479999999776554221
Q ss_pred cccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHc-CCcEEEEEEccCChHHHHHHHH-hC
Q 014721 98 RNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRES-GVEYSYIATENDNYASVKLFTD-KC 175 (419)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~-G~~~i~l~t~~~N~~s~~lFY~-K~ 175 (419)
.....+.|.+|+|..+||+.|||++|+.++.....+. +++++-|.+..+|.+|+.| |+ .+
T Consensus 67 -----------------~~~~hGhItSlaV~rs~RrlGla~kLm~qa~rAm~E~~~A~yvsLHVR~SNraAl~L-Y~~tl 128 (193)
T KOG3235|consen 67 -----------------DEPPHGHITSLAVKRSYRRLGLAQKLMNQASRAMVEVYEAKYVSLHVRKSNRAALHL-YKNTL 128 (193)
T ss_pred -----------------CCCCCCeeEEeeehhhHHHhhHHHHHHHHHHHHHHHhhcceEEEEeeecccHHHHHh-hhhcc
Confidence 1224789999999999999999999999987776654 8999999999999999998 77 89
Q ss_pred CCEEeeece
Q 014721 176 GYSKFRTPS 184 (419)
Q Consensus 176 GF~~~~~~~ 184 (419)
||+......
T Consensus 129 ~F~v~eve~ 137 (193)
T KOG3235|consen 129 GFVVCEVEP 137 (193)
T ss_pred ceEEeeccc
Confidence 999877643
No 46
>PF13302 Acetyltransf_3: Acetyltransferase (GNAT) domain; PDB: 3TTH_C 3JUW_A 2ZXV_A 2Z0Z_A 2VI7_B 3EG7_F 1YRE_C 3IGR_B 3FBU_A 2FCK_A ....
Probab=99.14 E-value=3.9e-10 Score=97.42 Aligned_cols=132 Identities=21% Similarity=0.267 Sum_probs=86.7
Q ss_pred EEEEECCCcCcHHHHHHHHHHHccCCC---CCcchhhhhccChhh-hhhcCC--CcEEEEEEE--CCeEEEEEEeEeeec
Q 014721 19 IVVREFDPNKDCLGVEDVERRCEVGPS---GKLCLFTDLLGDPIC-RVRHSP--AFLMLVAEV--GDEIVGMIRGCIKTV 90 (419)
Q Consensus 19 l~IR~~~~~~Dl~~I~eL~~~~e~~~~---g~~~l~~~~~~d~i~-ri~~~p--~~~~lVAe~--dgeiVG~i~~~~~~~ 90 (419)
+.||+++ ++|++.+.++....+...+ +......+.....+. ...... ....+++.+ ++++||++.......
T Consensus 2 l~lr~~~-~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~iG~i~~~~~~~ 80 (142)
T PF13302_consen 2 LTLRPLT-PEDADAIYEWRSDPEIRRYLPWGPPWPTLEEAEEWIQSRQDSWENHGYYYFAIEDKDDGEIIGFIGLYNIDK 80 (142)
T ss_dssp EEEEE-H-GGGHHHHHHHHTTTTHCTTSSTTTSSSSHHHHHHHHHHHHHCHHEETEEEEEEEETTTTEEEEEEEEEEEET
T ss_pred EEEEcCC-HHHHHHHHHHhcCHHHHHhcCCCCCCCCHHHHHHHHHHhhhhhhcccceEEEEEeccCCceEEEeeeeeccc
Confidence 5799999 9999999998743332222 111011111111122 111111 134455554 357999987733321
Q ss_pred ccCcccccccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHH-HHcCCcEEEEEEccCChHHHH
Q 014721 91 TCGKRISRNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWF-RESGVEYSYIATENDNYASVK 169 (419)
Q Consensus 91 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a-~~~G~~~i~l~t~~~N~~s~~ 169 (419)
....+. .++.|.|+|||+|+|+.++..+++++ ...|+..+...+..+|.+|++
T Consensus 81 -------------------------~~~~~e-ig~~i~~~~~g~G~~~~~~~~~~~~~~~~~~~~~i~a~~~~~N~~s~~ 134 (142)
T PF13302_consen 81 -------------------------NNNWAE-IGYWIGPDYRGKGYGTEALKLLLDWAFEELGLHRIIATVMADNEASRR 134 (142)
T ss_dssp -------------------------TTTEEE-EEEEEEGGGTTSSHHHHHHHHHHHHHHHTSTSSEEEEEEETT-HHHHH
T ss_pred -------------------------CCCccc-cccchhHHHHhhhHHHHHHHHHHHHHHhcCCcEEEEEEECcCCHHHHH
Confidence 124555 45889999999999999999999999 467999999999999999999
Q ss_pred HHHHhCCCE
Q 014721 170 LFTDKCGYS 178 (419)
Q Consensus 170 lFY~K~GF~ 178 (419)
+ ++|+||+
T Consensus 135 ~-~~k~GF~ 142 (142)
T PF13302_consen 135 L-LEKLGFE 142 (142)
T ss_dssp H-HHHTT-E
T ss_pred H-HHHcCCC
Confidence 7 9999996
No 47
>KOG3396 consensus Glucosamine-phosphate N-acetyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.12 E-value=8.4e-10 Score=94.36 Aligned_cols=133 Identities=17% Similarity=0.238 Sum_probs=99.4
Q ss_pred cEEEEECCCcCcHHH-HHHHHH-HHccCCCCCcchhhhhccChhhhhhcCCC-cEEEEEEE--CCeEEEEEEeEeeeccc
Q 014721 18 NIVVREFDPNKDCLG-VEDVER-RCEVGPSGKLCLFTDLLGDPICRVRHSPA-FLMLVAEV--GDEIVGMIRGCIKTVTC 92 (419)
Q Consensus 18 ~l~IR~~~~~~Dl~~-I~eL~~-~~e~~~~g~~~l~~~~~~d~i~ri~~~p~-~~~lVAe~--dgeiVG~i~~~~~~~~~ 92 (419)
.+.+|++. .+|+.. ..++.. ....+.-. .+++...+..++.+.. +...|+++ .+++||.+...+..-.
T Consensus 6 ~~~lR~L~-~~D~~kGf~elL~qLT~vG~vt-----~e~F~krf~~mk~~~~~Y~i~Vied~~s~~vigtatL~IE~Kf- 78 (150)
T KOG3396|consen 6 GFKLRPLE-EDDYGKGFIELLKQLTSVGVVT-----REQFEKRFEAMKKSGDWYYIVVIEDKESEKVIGTATLFIERKF- 78 (150)
T ss_pred ceEEeecc-cccccchHHHHHHHHhhccccC-----HHHHHHHHHHHHhcCCcEEEEEEEeCCcCeEEEEEEEEEehhh-
Confidence 38899999 999885 555433 33444332 2333333455555555 55667765 4899999987776421
Q ss_pred CcccccccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChHHHHHHH
Q 014721 93 GKRISRNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYASVKLFT 172 (419)
Q Consensus 93 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~lFY 172 (419)
. -.-+..+.|..+.|+++|||+++|+.|+..+.+.++..|+-.+.|.....|.. ||
T Consensus 79 --I------------------h~~g~rGhiEDVVV~~~~rgk~LGkllv~~Lv~l~k~lgcYKi~LdC~~~nv~----FY 134 (150)
T KOG3396|consen 79 --I------------------HGCGSRGHIEDVVVDSEYRGKQLGKLLVETLVDLAKSLGCYKIILDCDPKNVK----FY 134 (150)
T ss_pred --h------------------hcccccCceeEEEeChhhhhhHHhHHHHHHHHHHHHhcCcEEEEEecchhhhh----HH
Confidence 0 11236788999999999999999999999999999999999999999999999 99
Q ss_pred HhCCCEEee
Q 014721 173 DKCGYSKFR 181 (419)
Q Consensus 173 ~K~GF~~~~ 181 (419)
+|+||+...
T Consensus 135 eKcG~s~~~ 143 (150)
T KOG3396|consen 135 EKCGYSNAG 143 (150)
T ss_pred HHcCccccc
Confidence 999998765
No 48
>PRK13688 hypothetical protein; Provisional
Probab=99.11 E-value=5.7e-10 Score=100.01 Aligned_cols=114 Identities=21% Similarity=0.150 Sum_probs=78.6
Q ss_pred EEECCCcCcHHHHHHHHHHHccCCCCCcchhhhhccChhhhhhcCCCcEEEEEEECCeEEEEEEeEeeecc-cCcccccc
Q 014721 21 VREFDPNKDCLGVEDVERRCEVGPSGKLCLFTDLLGDPICRVRHSPAFLMLVAEVGDEIVGMIRGCIKTVT-CGKRISRN 99 (419)
Q Consensus 21 IR~~~~~~Dl~~I~eL~~~~e~~~~g~~~l~~~~~~d~i~ri~~~p~~~~lVAe~dgeiVG~i~~~~~~~~-~g~~~~~~ 99 (419)
||++. .+|+.++.++...++.... ...++++.+++++||++........ .+.
T Consensus 20 ~~~~~-~~dl~~l~~l~~~~f~~~~---------------------~~~~~~~~~~~~~VG~~~l~~~dg~~~~~----- 72 (156)
T PRK13688 20 FREFG-NQELSMLEELQANIIENDS---------------------ESPFYGIYYGDSLVARMSLYKKGGVEEPY----- 72 (156)
T ss_pred HHHhc-HHHHHHHHhhhhhEeecCC---------------------CCCEEEEEECCEEEEEEEEEecCCccccc-----
Confidence 57888 8899999998877763211 1336778889999998866443210 000
Q ss_pred cccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChHHHHHHHHhCCCEE
Q 014721 100 TKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYASVKLFTDKCGYSK 179 (419)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~lFY~K~GF~~ 179 (419)
.......++|..++|+|+|||+|||++|++.+. +.+.. +.+...|. +.. ||+|+||+.
T Consensus 73 -------------~~~~~~~~~L~~l~V~p~~rgkGiG~~Ll~~a~----~~~~~---~~~~~~~~-a~~-FY~k~GF~~ 130 (156)
T PRK13688 73 -------------FEDTQDYLELWKLEVLPKYQNRGYGEMLVDFAK----SFQLP---IKTIARNK-SKD-FWLKLGFTP 130 (156)
T ss_pred -------------ccCCCCeEEEEEEEECHHHcCCCHHHHHHHHHH----HhCCe---EEEEeccc-hHH-HHHhCCCEE
Confidence 012236689999999999999999999998654 33443 23334453 566 799999998
Q ss_pred eeec
Q 014721 180 FRTP 183 (419)
Q Consensus 180 ~~~~ 183 (419)
.+..
T Consensus 131 ~~~~ 134 (156)
T PRK13688 131 VEYK 134 (156)
T ss_pred eEEe
Confidence 8874
No 49
>PF08445 FR47: FR47-like protein; InterPro: IPR013653 Proteins in this entry have a conserved region similar to the C-terminal region of the Drosophila melanogaster (Fruit fly) hypothetical protein FR47 (Q9VR51 from SWISSPROT). This protein has been found to consist of two N-acyltransferase-like domains swapped with the C-terminal strands. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups; PDB: 1SQH_A 3EC4_B.
Probab=99.02 E-value=3.5e-09 Score=85.36 Aligned_cols=61 Identities=31% Similarity=0.522 Sum_probs=52.7
Q ss_pred EEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChHHHHHHHHhCCCEEeee
Q 014721 120 AYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYASVKLFTDKCGYSKFRT 182 (419)
Q Consensus 120 ~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~lFY~K~GF~~~~~ 182 (419)
+.|..+.|+|+|||+|+|+.|+..+.+.+.++|.. .++.+..+|.+|+++ |+|+||+....
T Consensus 22 g~i~~v~t~p~~RrrGlg~~lv~~l~~~~~~~g~~-~~l~v~~~N~~s~~l-y~klGf~~~~~ 82 (86)
T PF08445_consen 22 GEIGGVYTLPEHRRRGLGSALVAALARELLERGKT-PFLYVDADNEASIRL-YEKLGFREIEE 82 (86)
T ss_dssp CCEEEEEE-GGGTTSSHHHHHHHHHHHHHHHTTSE-EEEEEETT-HHHHHH-HHHCT-EEEEE
T ss_pred cEEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCCc-EEEEEECCCHHHHHH-HHHcCCEEEEE
Confidence 57888999999999999999999999999998875 578899999999996 99999998865
No 50
>cd02169 Citrate_lyase_ligase Citrate lyase ligase. Citrate lyase ligase, also known as [Citrate (pro-3S)-lyase] ligase, is responsible for acetylation of the (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) prosthetic group of the gamma subunit of citrate lyase, converting the inactive thiol form of this enzyme to the active form. The acetylation of 1 molecule of deacetyl-citrate lyase to enzymatically active citrate lyase requires 6 molecules of ATP. The Adenylylyltranferase activity of the enzyme involves the formation of AMP and and pyrophosphate in the acetylation reaction.
Probab=99.01 E-value=1.6e-09 Score=106.83 Aligned_cols=78 Identities=17% Similarity=0.230 Sum_probs=65.6
Q ss_pred cEEEEEEECCeEEEEEEeEeeecccCcccccccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHH
Q 014721 68 FLMLVAEVGDEIVGMIRGCIKTVTCGKRISRNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEW 147 (419)
Q Consensus 68 ~~~lVAe~dgeiVG~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~ 147 (419)
..+.+.+++|++||++... ...|..++|+|+|||+|||++|+++++++
T Consensus 6 ~~~~v~~~~~~iVG~~~l~--------------------------------~~~I~~vaV~p~~Rg~GiG~~Ll~~l~~~ 53 (297)
T cd02169 6 YTVGIFDDAGELIATGSIA--------------------------------GNVLKCVAVCPKYQGEGLALKIVSELINK 53 (297)
T ss_pred EEEEEEEECCEEEEEEEec--------------------------------cCEEEEEEECHHHcCCCHHHHHHHHHHHH
Confidence 3456667789999986431 01478899999999999999999999999
Q ss_pred HHHcCCcEEEEEEccCChHHHHHHHHhCCCEEee
Q 014721 148 FRESGVEYSYIATENDNYASVKLFTDKCGYSKFR 181 (419)
Q Consensus 148 a~~~G~~~i~l~t~~~N~~s~~lFY~K~GF~~~~ 181 (419)
++++|++.+++.+...|.. ||+|+||+..+
T Consensus 54 a~~~g~~~i~L~t~~~~~~----fYek~GF~~~~ 83 (297)
T cd02169 54 AYEEGIFHLFLFTKPKNAK----FFRGLGFKELA 83 (297)
T ss_pred HHHCCCCEEEEEEcccHHH----HHHHCCCEEec
Confidence 9999999999998776644 89999999888
No 51
>KOG3234 consensus Acetyltransferase, (GNAT) family [General function prediction only]
Probab=98.99 E-value=1.8e-09 Score=94.63 Aligned_cols=133 Identities=22% Similarity=0.262 Sum_probs=94.6
Q ss_pred EEEECCCcCcHHHHHHHHHHHccCCCCCcchhhhhccChhhhhhcCCCcEEEEEEE-CCeEEEEEEeEeeecccCccccc
Q 014721 20 VVREFDPNKDCLGVEDVERRCEVGPSGKLCLFTDLLGDPICRVRHSPAFLMLVAEV-GDEIVGMIRGCIKTVTCGKRISR 98 (419)
Q Consensus 20 ~IR~~~~~~Dl~~I~eL~~~~e~~~~g~~~l~~~~~~d~i~ri~~~p~~~~lVAe~-dgeiVG~i~~~~~~~~~g~~~~~ 98 (419)
+||++. .+|+-....+.-..-....+....+.-+ ...| ..+.+++. +|+|-|++++.....
T Consensus 3 t~r~f~-~~Dlf~fNninLDpltEt~~~~Fyl~yl--------~~~p-e~~~~a~~p~~~imgyimgk~Eg~-------- 64 (173)
T KOG3234|consen 3 TIRPFT-PQDLFKFNNINLDPLTETFPISFYLIYL--------AIWP-EDFIVAEAPTGEIMGYIMGKVEGK-------- 64 (173)
T ss_pred cccccc-HHHHHhhccccccccccccceehhHHHH--------HhCh-HHhEeccCCCCceEEEEeeecccc--------
Confidence 478888 7777655544222211111111111112 2233 34677764 589999998843321
Q ss_pred ccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChHHHHHHHHhCCCE
Q 014721 99 NTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYASVKLFTDKCGYS 178 (419)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~lFY~K~GF~ 178 (419)
...-.+.+..|.|+|+||+.|+|++|+..+++-....++-.+.+.+..+|+.|+.+ |+|+||.
T Consensus 65 ----------------~~~wh~HvTAltVap~~Rrl~la~~lm~~led~~d~~~a~fvDLfVr~sN~iAI~m-YkkLGY~ 127 (173)
T KOG3234|consen 65 ----------------DTEWHGHVTALTVAPDYRRLGLAAKLMDTLEDVSDVDNAYFVDLFVRVSNQIAIDM-YKKLGYS 127 (173)
T ss_pred ----------------CcceeeEEEEEEechhHHHHHHHHHHHHHHHHHHHhhhhheeeeeeeccchhHHHH-HHhcCce
Confidence 11246889999999999999999999999999998888889999999999999995 9999999
Q ss_pred Eeeeceeee
Q 014721 179 KFRTPSILV 187 (419)
Q Consensus 179 ~~~~~~~~~ 187 (419)
..++...|.
T Consensus 128 ~YR~Vi~YY 136 (173)
T KOG3234|consen 128 VYRTVIEYY 136 (173)
T ss_pred EEEeeeeee
Confidence 999866664
No 52
>KOG3138 consensus Predicted N-acetyltransferase [General function prediction only]
Probab=98.88 E-value=4.7e-09 Score=95.95 Aligned_cols=140 Identities=18% Similarity=0.255 Sum_probs=96.7
Q ss_pred EEEEECCCcCcHHHHHHHHHHHccCCCCCcchhhhhccChhhhhhcCCCcEEEEEEECCeEEEEEEeEeeecccCccccc
Q 014721 19 IVVREFDPNKDCLGVEDVERRCEVGPSGKLCLFTDLLGDPICRVRHSPAFLMLVAEVGDEIVGMIRGCIKTVTCGKRISR 98 (419)
Q Consensus 19 l~IR~~~~~~Dl~~I~eL~~~~e~~~~g~~~l~~~~~~d~i~ri~~~p~~~~lVAe~dgeiVG~i~~~~~~~~~g~~~~~ 98 (419)
+.+|..+ +.++.++..|.+.++...+... ++.+.... ....-+.+. ++..||.++.....-..+...
T Consensus 17 ~~l~~it-~~nl~~~~~l~~~~fP~~y~~k-fy~~~~~~--------~~~~~~A~~-~~~~v~a~~~k~~~~~~~~~r-- 83 (187)
T KOG3138|consen 17 IELRLIT-PNNLKQLKQLNEDIFPISYVDK-FYPDVLSN--------GDLTQLAYY-NEIAVGAVACKLIKFVQNAKR-- 83 (187)
T ss_pred eeeccCC-cchHHHHHHHhccccCcchHHH-HHHHHHhc--------CCHHHhhhh-ccccccceeeeehhhhhhhhh--
Confidence 8899999 9999999999999876654322 33333222 111122222 334444433222211111000
Q ss_pred ccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcC-CcEEEEEEccCChHHHHHHHHhCCC
Q 014721 99 NTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESG-VEYSYIATENDNYASVKLFTDKCGY 177 (419)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G-~~~i~l~t~~~N~~s~~lFY~K~GF 177 (419)
..+ .+++||..|.|.|.||.+|||+.|++.+++.+.+.. ++.+++.+...|..++. ||++.||
T Consensus 84 -------------~~~--~~~~yi~~Lgvl~~yR~~gIGs~Ll~~~~~~~~~~~~~~~v~lHv~~~n~~ai~-~Y~~~gF 147 (187)
T KOG3138|consen 84 -------------LFG--NRVIYILSLGVLPRYRNKGIGSKLLEFVKKYCSEAHQCRRVYLHVQAVNESAIE-FYEKRGF 147 (187)
T ss_pred -------------hhc--cceeEEEeecccHHHHhcchHHHHHHHHHHHHhcccccceEEEEEEeCCCcHHH-HHHhcCc
Confidence 000 126899999999999999999999999999999887 88899999999999999 6999999
Q ss_pred EEeeeceeee
Q 014721 178 SKFRTPSILV 187 (419)
Q Consensus 178 ~~~~~~~~~~ 187 (419)
+.+.+...+.
T Consensus 148 ~~~~~~~~~y 157 (187)
T KOG3138|consen 148 EIVERLKNYY 157 (187)
T ss_pred eEeecccccc
Confidence 9998865543
No 53
>KOG2488 consensus Acetyltransferase (GNAT) domain-containing protein [General function prediction only]
Probab=98.83 E-value=3.2e-08 Score=89.51 Aligned_cols=90 Identities=16% Similarity=0.207 Sum_probs=76.1
Q ss_pred cEEEEEEECC-eEEEEEEeEeeecccCcccccccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHH
Q 014721 68 FLMLVAEVGD-EIVGMIRGCIKTVTCGKRISRNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEE 146 (419)
Q Consensus 68 ~~~lVAe~dg-eiVG~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~ 146 (419)
..+++|-.++ ++|||++..... .+ ...+.|+..+-|.++|||+|||+.|++.++.
T Consensus 92 ~~Yi~a~~~~~~~vgf~~Frf~v-d~-----------------------g~~vlYcyEvqv~~~yR~kGiGk~LL~~l~~ 147 (202)
T KOG2488|consen 92 LRYICAWNNKSKLVGFTMFRFTV-DT-----------------------GDPVLYCYEVQVASAYRGKGIGKFLLDTLEK 147 (202)
T ss_pred ceEEEEEcCCCceeeEEEEEEEc-cc-----------------------CCeEEEEEEEeehhhhhccChHHHHHHHHHH
Confidence 3466776654 899998655443 22 2368999999999999999999999999999
Q ss_pred HHHHcCCcEEEEEEccCChHHHHHHHHhCCCEEeee
Q 014721 147 WFRESGVEYSYIATENDNYASVKLFTDKCGYSKFRT 182 (419)
Q Consensus 147 ~a~~~G~~~i~l~t~~~N~~s~~lFY~K~GF~~~~~ 182 (419)
.+.....+.+.|+|..+|.+|+. ||.++||....+
T Consensus 148 ~a~~~~~~kVmLTVf~~N~~al~-Fy~~~gf~~~~~ 182 (202)
T KOG2488|consen 148 LADSRHMRKVMLTVFSENIRALG-FYHRLGFVVDEE 182 (202)
T ss_pred HHHHHHhhhheeeeecccchhHH-HHHHcCcccCCC
Confidence 99999999999999999999999 799999987665
No 54
>TIGR00124 cit_ly_ligase [citrate (pro-3S)-lyase] ligase. ATP is cleaved to AMP and pyrophosphate during the reaction. The carboxyl end is homologous to a number of cytidyltransferases that also release pyrophosphate.
Probab=98.81 E-value=3.6e-08 Score=98.67 Aligned_cols=79 Identities=23% Similarity=0.331 Sum_probs=67.6
Q ss_pred cEEEEEEECCeEEEEEEeEeeecccCcccccccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHH
Q 014721 68 FLMLVAEVGDEIVGMIRGCIKTVTCGKRISRNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEW 147 (419)
Q Consensus 68 ~~~lVAe~dgeiVG~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~ 147 (419)
..+++++++|++||+.... | ..|..++|+|+|||+|+|++|+.++++.
T Consensus 31 d~~vv~~~~~~lVg~g~l~------g--------------------------~~ik~vaV~~~~rG~Glg~~L~~~L~~~ 78 (332)
T TIGR00124 31 EIFIAVYEDEEIIGCGGIA------G--------------------------NVIKCVAIDESLRGEGLALQLMTELENL 78 (332)
T ss_pred CEEEEEEECCEEEEEEEEe------c--------------------------CEEEEEEEcHHHcCCCHHHHHHHHHHHH
Confidence 4577888899999997542 0 1367899999999999999999999999
Q ss_pred HHHcCCcEEEEEEccCChHHHHHHHHhCCCEEeee
Q 014721 148 FRESGVEYSYIATENDNYASVKLFTDKCGYSKFRT 182 (419)
Q Consensus 148 a~~~G~~~i~l~t~~~N~~s~~lFY~K~GF~~~~~ 182 (419)
++++|...+++.|...|.. ||+++||.....
T Consensus 79 a~~~G~~~l~l~Tk~~~~~----fy~klGF~~i~~ 109 (332)
T TIGR00124 79 AYELGRFHLFIFTKPEYAA----LFEYCGFKTLAE 109 (332)
T ss_pred HHHcCCCEEEEEECchHHH----HHHHcCCEEeee
Confidence 9999999999999877654 799999998876
No 55
>COG3393 Predicted acetyltransferase [General function prediction only]
Probab=98.76 E-value=5.1e-08 Score=92.73 Aligned_cols=66 Identities=18% Similarity=0.241 Sum_probs=58.7
Q ss_pred CeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChHHHHHHHHhCCCEEeeecee
Q 014721 118 KLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYASVKLFTDKCGYSKFRTPSI 185 (419)
Q Consensus 118 ~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~lFY~K~GF~~~~~~~~ 185 (419)
..+.|.+++|+|+|||||+|++|+..+-+..-+.|.. ..|.+..+|..|.+. |+|.||+..++...
T Consensus 200 ~~~~I~gV~T~peyR~kGyAt~lva~L~~~lL~eGk~-~~L~~~~~N~~A~~i-Y~riGF~~~g~~~~ 265 (268)
T COG3393 200 AYAQINGVYTHPEYRGKGYATALVATLAAKLLAEGKI-PCLFVNSDNPVARRI-YQRIGFREIGEFRE 265 (268)
T ss_pred cceEEEEEEcCHHHccccHHHHHHHHHHHHHHhCCCe-eEEEEecCCHHHHHH-HHHhCCeecceEEE
Confidence 6789999999999999999999999999999998875 446777999999997 99999999986443
No 56
>COG3981 Predicted acetyltransferase [General function prediction only]
Probab=98.65 E-value=1.8e-07 Score=83.59 Aligned_cols=139 Identities=25% Similarity=0.257 Sum_probs=90.8
Q ss_pred cEEEEECCCcCcHHHHHHHHHHHccCCC---C---Cc----chhhhhccChhhhh---hcC-----CCcEEEEEEECCeE
Q 014721 18 NIVVREFDPNKDCLGVEDVERRCEVGPS---G---KL----CLFTDLLGDPICRV---RHS-----PAFLMLVAEVGDEI 79 (419)
Q Consensus 18 ~l~IR~~~~~~Dl~~I~eL~~~~e~~~~---g---~~----~l~~~~~~d~i~ri---~~~-----p~~~~lVAe~dgei 79 (419)
.+.++..+ ..|.+++.++...-..... + .. .-+.+.+.+ +.+. .+. +...++....++++
T Consensus 3 ~~~l~~p~-L~~k~a~le~~~e~~~~~~~~~~~~~~~~~~~~~fed~L~~-~~~~~~~~~~~~g~V~~~~y~~v~~d~~i 80 (174)
T COG3981 3 EMKLRRPT-LKDKDAFLEMKKEFLTDGSTEAGAAWKADYEQEDFEDWLED-LTRQEPGNNLPEGWVPASTYWAVDEDGQI 80 (174)
T ss_pred cccccCCc-hhhHHHHHHHHHhhhhcCCcccCceeecccccccHHHHHHH-HhccCCCcCCCCCceeceeEEEEecCCcE
Confidence 35577777 7888888886555421110 0 00 223333333 2221 112 22333433447999
Q ss_pred EEEEEeEeeecccCcccccccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEE
Q 014721 80 VGMIRGCIKTVTCGKRISRNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIA 159 (419)
Q Consensus 80 VG~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~ 159 (419)
||++.....-... ....+.-.|..|.|+.||||+|+.+++.+++.|++.|.+.+.++
T Consensus 81 vG~i~lRh~Ln~~-----------------------ll~~gGHIGY~VrPseR~KGYA~emLkl~L~~ar~lgi~~Vlvt 137 (174)
T COG3981 81 VGFINLRHQLNDF-----------------------LLEEGGHIGYSVRPSERRKGYAKEMLKLALEKARELGIKKVLVT 137 (174)
T ss_pred EEEEEeeeecchH-----------------------HHhcCCcccceeChhhhccCHHHHHHHHHHHHHHHcCCCeEEEE
Confidence 9999655433211 01113334567999999999999999999999999999999999
Q ss_pred EccCChHHHHHHHHhCCCEEeee
Q 014721 160 TENDNYASVKLFTDKCGYSKFRT 182 (419)
Q Consensus 160 t~~~N~~s~~lFY~K~GF~~~~~ 182 (419)
+..+|.+|.+. -+++|=....+
T Consensus 138 cd~dN~ASrkv-I~~NGGile~~ 159 (174)
T COG3981 138 CDKDNIASRKV-IEANGGILENE 159 (174)
T ss_pred eCCCCchhhHH-HHhcCCEEeEE
Confidence 99999999998 78888765554
No 57
>COG1670 RimL Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]
Probab=98.54 E-value=2.3e-06 Score=76.48 Aligned_cols=62 Identities=16% Similarity=0.235 Sum_probs=55.9
Q ss_pred EEEEEEECcchhcCCHHHHHHHHHHHHHHH-cCCcEEEEEEccCChHHHHHHHHhCCCEEeeec
Q 014721 121 YILGLRVSPSHRRMGIGLKLVKRMEEWFRE-SGVEYSYIATENDNYASVKLFTDKCGYSKFRTP 183 (419)
Q Consensus 121 ~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~-~G~~~i~l~t~~~N~~s~~lFY~K~GF~~~~~~ 183 (419)
...+..+.|+|+|+|+|+..+..+++++.+ .|+..+.+.+...|.+|+++ ++|+||+..+..
T Consensus 97 ~~ig~~l~~~~~g~G~~tea~~~~l~~~f~~~~l~ri~~~~~~~N~~S~rv-~ek~Gf~~eg~~ 159 (187)
T COG1670 97 AEIGYWLDPEYWGKGYATEALRALLDYAFEELGLHRIEATVDPENEASIRV-YEKLGFRLEGEL 159 (187)
T ss_pred EEEEEEEChHHhcCchHHHHHHHHHHHhhhhcCceEEEEEecCCCHHHHHH-HHHcCChhhhhh
Confidence 345566799999999999999999999887 59999999999999999997 999999988863
No 58
>KOG3397 consensus Acetyltransferases [General function prediction only]
Probab=98.47 E-value=4e-07 Score=81.10 Aligned_cols=87 Identities=29% Similarity=0.533 Sum_probs=68.3
Q ss_pred CCcEEEEEEECCeEEEEEEeEeeecccCcccccccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHH
Q 014721 66 PAFLMLVAEVGDEIVGMIRGCIKTVTCGKRISRNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRME 145 (419)
Q Consensus 66 p~~~~lVAe~dgeiVG~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~ 145 (419)
|...++.-|...++||......-. ...+..++..+.|+.++||+|.|+.||+-+|
T Consensus 55 P~sL~Ll~E~~~~VigH~rLS~i~-------------------------n~~~al~VEsVVV~k~~RG~GFGk~lMk~~E 109 (225)
T KOG3397|consen 55 PMSLLLLNEENDEVLGHSRLSHLP-------------------------NRDHALWVESVVVKKDQRGLGFGKFLMKSTE 109 (225)
T ss_pred CeeeeeecccccceeeeeccccCC-------------------------CCCceeEEEEEEEehhhccccHHHHHHHHHH
Confidence 434445555567899987554322 1336788999999999999999999999999
Q ss_pred HHHHHcCCcEEEEEEccCChHHHHHHHHhCCCEEeee
Q 014721 146 EWFRESGVEYSYIATENDNYASVKLFTDKCGYSKFRT 182 (419)
Q Consensus 146 ~~a~~~G~~~i~l~t~~~N~~s~~lFY~K~GF~~~~~ 182 (419)
+|++..|.+.+||.|... .. ||+++||+...-
T Consensus 110 ~~~R~~gf~~~yLsT~DQ----~~-FYe~lGYe~c~P 141 (225)
T KOG3397|consen 110 KWMREKGFNEAYLSTDDQ----CR-FYESLGYEKCDP 141 (225)
T ss_pred HHHHHhhhhheeeecccc----hh-hhhhhcccccCc
Confidence 999999999999987654 23 899999996654
No 59
>cd04301 NAT_SF N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate. NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, ranging from bacterial antibiotic resistance to circadian rhythms in mammals. Members include GCN5-related N-Acetyltransferases (GNAT) such as Aminoglycoside N-acetyltransferases, Histone N-acetyltransferase (HAT) enzymes, and Serotonin N-acetyltransferase, which catalyze the transfer of an acetyl group to a substrate. The kinetic mechanism of most GNATs involves the ordered formation of a ternary complex: the reaction begins with Acetyl Coenzyme A (AcCoA) binding, followed by binding of substrate, then direct transfer of the acetyl group from AcCoA to the substrate, followed by product and subsequent CoA release. Other family members include Arginine/ornithine N-succinyltransfera
Probab=98.44 E-value=1.7e-06 Score=62.48 Aligned_cols=63 Identities=38% Similarity=0.377 Sum_probs=52.0
Q ss_pred EEEEECCeEEEEEEeEeeecccCcccccccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHH
Q 014721 71 LVAEVGDEIVGMIRGCIKTVTCGKRISRNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRE 150 (419)
Q Consensus 71 lVAe~dgeiVG~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~ 150 (419)
+++..++++||++....... ..+.+++..+.|+|+|||+|+|++++..+++++.+
T Consensus 2 ~~~~~~~~~ig~~~~~~~~~-------------------------~~~~~~l~~~~v~~~~~~~g~~~~~~~~~~~~~~~ 56 (65)
T cd04301 2 LVAEDDGEIVGFASLSPDGS-------------------------GGDTAYIGDLAVLPEYRGKGIGSALLEAAEEEARE 56 (65)
T ss_pred EEEecCCEEEEEEEEEecCC-------------------------CCccEEEEEEEECHHHcCcCHHHHHHHHHHHHHHH
Confidence 45566899999987765431 12567888899999999999999999999999999
Q ss_pred cCCcEEEE
Q 014721 151 SGVEYSYI 158 (419)
Q Consensus 151 ~G~~~i~l 158 (419)
.|.+.+.+
T Consensus 57 ~~~~~v~~ 64 (65)
T cd04301 57 RGAKRLRL 64 (65)
T ss_pred cCCcEEEe
Confidence 88887765
No 60
>PF12746 GNAT_acetyltran: GNAT acetyltransferase; PDB: 3G3S_B.
Probab=98.35 E-value=4.4e-06 Score=80.98 Aligned_cols=88 Identities=17% Similarity=0.097 Sum_probs=63.3
Q ss_pred cEEEEEEECCeEEEEEEeEeeecccCcccccccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHH
Q 014721 68 FLMLVAEVGDEIVGMIRGCIKTVTCGKRISRNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEW 147 (419)
Q Consensus 68 ~~~lVAe~dgeiVG~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~ 147 (419)
+.-+++..+|+||+.+...... .... -.++.++|+|||||+|+.+..+++..
T Consensus 165 G~Gf~i~~~~~iVs~~~s~~~~---------------------------~~~~-EI~I~T~~~yR~kGLA~~~aa~~I~~ 216 (265)
T PF12746_consen 165 GFGFCILHDGEIVSGCSSYFVY---------------------------ENGI-EIDIETHPEYRGKGLATAVAAAFILE 216 (265)
T ss_dssp --EEEEEETTEEEEEEEEEEEE---------------------------TTEE-EEEEEE-CCCTTSSHHHHHHHHHHHH
T ss_pred CcEEEEEECCEEEEEEEEEEEE---------------------------CCEE-EEEEEECHHhhcCCHHHHHHHHHHHH
Confidence 4457777899999765433222 1222 35688999999999999999999999
Q ss_pred HHHcCCcEEEEEEccCChHHHHHHHHhCCCEEeeeceeee
Q 014721 148 FRESGVEYSYIATENDNYASVKLFTDKCGYSKFRTPSILV 187 (419)
Q Consensus 148 a~~~G~~~i~l~t~~~N~~s~~lFY~K~GF~~~~~~~~~~ 187 (419)
|.++|....+=. .|.+|+++ -+|+||+....+..|.
T Consensus 217 Cl~~~l~P~WDc---~N~~S~~l-A~kLGf~~~~~Y~~Y~ 252 (265)
T PF12746_consen 217 CLENGLYPSWDC---HNLASIAL-AEKLGFHFDFEYTAYE 252 (265)
T ss_dssp HHHTT-EEE-EE---SSHHHHHH-HHHCT--EEEEEEEE-
T ss_pred HHHCCCCcCeeC---CCHHHHHH-HHHcCCcccceeeeee
Confidence 999998665443 69999998 9999999998887775
No 61
>COG2153 ElaA Predicted acyltransferase [General function prediction only]
Probab=98.33 E-value=4.5e-06 Score=72.66 Aligned_cols=86 Identities=21% Similarity=0.215 Sum_probs=64.5
Q ss_pred cEEEEEEECCeEEEEEEeEeeecccCcccccccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHH
Q 014721 68 FLMLVAEVGDEIVGMIRGCIKTVTCGKRISRNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEW 147 (419)
Q Consensus 68 ~~~lVAe~dgeiVG~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~ 147 (419)
...++-..+|++|++++...... .+.+ ..|..+.|+|+.||+|+|.+||..+++.
T Consensus 50 ~Hl~~~~~~g~LvAyaRLl~~~~------------------------~~~~-~~iGRV~v~~~~RG~glG~~Lm~~AL~~ 104 (155)
T COG2153 50 RHLLGWTPDGELVAYARLLPPGA------------------------EYEE-VSIGRVIVSPAARGQGLGQQLMEKALET 104 (155)
T ss_pred ceEEEEcCCCeEEEEEecCCCCC------------------------CcCc-eeeeeEEECHhhhccchhHHHHHHHHHH
Confidence 44555555999999998775542 1223 6689999999999999999999999999
Q ss_pred HHHcCC-cEEEEEEccCChHHHHHHHHhCCCEEeee
Q 014721 148 FRESGV-EYSYIATENDNYASVKLFTDKCGYSKFRT 182 (419)
Q Consensus 148 a~~~G~-~~i~l~t~~~N~~s~~lFY~K~GF~~~~~ 182 (419)
+.+... +.+++.. .+-.+.||.++||...+.
T Consensus 105 ~~~~~p~~~v~l~A----QahLq~fYa~~GFv~~~e 136 (155)
T COG2153 105 AGREWPDKPVYLGA----QAHLQDFYASFGFVRVGE 136 (155)
T ss_pred HHhhCCCCCeEEeh----HHHHHHHHHHhCcEEcCc
Confidence 988753 3343432 222445999999998887
No 62
>TIGR01211 ELP3 histone acetyltransferase, ELP3 family. The Saccharomyces cerevisiae member YPL086C has been characterized in vitro as an N-terminal acetyltransferase for all four core histones. It is a component of the RNA polymerase II holoenzyme, designated Elp3p for Elongator Protein 3. Members of this family are found in eukaryotes and archaea. These proteins are part of the larger set of GNAT acetyltransferases.
Probab=98.33 E-value=3.7e-06 Score=88.92 Aligned_cols=52 Identities=19% Similarity=0.247 Sum_probs=46.1
Q ss_pred ECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChHHHHHHHHhCCCEEeee
Q 014721 127 VSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYASVKLFTDKCGYSKFRT 182 (419)
Q Consensus 127 V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~lFY~K~GF~~~~~ 182 (419)
++|+|||+|||++|++++++.+++.|++.+.+.+ |..+++ ||+|+||+..+.
T Consensus 465 ~~~~~rg~GiG~~Ll~~ae~~Ar~~G~~~i~v~s---~~~A~~-FY~klGf~~~g~ 516 (522)
T TIGR01211 465 GDDEWQHRGYGRRLLEEAERIAAEEGSEKILVIS---GIGVRE-YYRKLGYELDGP 516 (522)
T ss_pred CChhHhCcCHHHHHHHHHHHHHHHCCCCEEEEee---CchHHH-HHHHCCCEEEcc
Confidence 4599999999999999999999999999997743 677888 799999998776
No 63
>PF13718 GNAT_acetyltr_2: GNAT acetyltransferase 2; PDB: 2ZPA_B.
Probab=98.31 E-value=5.2e-06 Score=76.79 Aligned_cols=122 Identities=20% Similarity=0.272 Sum_probs=69.8
Q ss_pred hhhhhcCCCcEEEEEEECC--eEEEEEEeEeeecc---------cCcccccccccc-cCCCCCCCCCCCCCCeEEEEEEE
Q 014721 59 ICRVRHSPAFLMLVAEVGD--EIVGMIRGCIKTVT---------CGKRISRNTKYT-TNDIEPPKPLPVYTKLAYILGLR 126 (419)
Q Consensus 59 i~ri~~~p~~~~lVAe~dg--eiVG~i~~~~~~~~---------~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~I~~L~ 126 (419)
+.++.+.|.+..+++..++ +++|++.++..... .|.....=.+.. ....+--.+.........|..++
T Consensus 18 L~~LlDaP~h~l~~l~~~~~p~il~~~~v~~EG~l~~~l~~~i~~g~rRp~G~LiP~~L~~~~~~~~f~~l~g~RIvRIA 97 (196)
T PF13718_consen 18 LQLLLDAPNHRLFVLLQPGDPDILGVAQVALEGGLSKELIEAILSGGRRPKGHLIPQTLAQHFGDPEFAQLSGARIVRIA 97 (196)
T ss_dssp HHHHHH-TTEEEEEEE-SS--SEEEEEEEEEEE---HHHHHHHHTTS---SS-HHHHHHHHHSS-TTGGGSEEEEEEEEE
T ss_pred HHHHhcCCcceeehhccCCCceEEEEEEEEecCCCCHHHHHHHHhCCCCCCCCCHHHHHHHHhCCHHHHhhcceeEEEEE
Confidence 5566777888899998888 99999988766421 011000000000 00000000111233678899999
Q ss_pred ECcchhcCCHHHHHHHHHHHHH-------------------------HHcCCcEEEEEEccCChHHHHHHHHhCCCEEee
Q 014721 127 VSPSHRRMGIGLKLVKRMEEWF-------------------------RESGVEYSYIATENDNYASVKLFTDKCGYSKFR 181 (419)
Q Consensus 127 V~P~yRgkGIG~~Ll~~~~~~a-------------------------~~~G~~~i~l~t~~~N~~s~~lFY~K~GF~~~~ 181 (419)
|+|++|++|||++|++.+++++ +..+++++-..- .-++.+--|+.|+||.+++
T Consensus 98 vhP~~q~~G~Gs~lL~~l~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~vDylGtSF--G~t~~Ll~FW~k~gf~pv~ 175 (196)
T PF13718_consen 98 VHPDLQRMGYGSRLLQQLEQYAEGKIPSLSEQDKEKLPPLLSKLSDRRPPGVDYLGTSF--GATPELLKFWQKNGFVPVY 175 (196)
T ss_dssp E-CCC-SSSHHHHHHHHHHHT-----------------------------S-SEEEEEE--E--HHHHHHHHCTT-EEEE
T ss_pred EChhhhcCCHHHHHHHHHHHHHhhhcccccccccccccccccccccccccCCCEEEecc--CCCHHHHHHHHHCCcEEEE
Confidence 9999999999999999999999 466787774433 3334454599999999887
Q ss_pred e
Q 014721 182 T 182 (419)
Q Consensus 182 ~ 182 (419)
-
T Consensus 176 l 176 (196)
T PF13718_consen 176 L 176 (196)
T ss_dssp E
T ss_pred E
Confidence 5
No 64
>COG4552 Eis Predicted acetyltransferase involved in intracellular survival and related acetyltransferases [General function prediction only]
Probab=98.23 E-value=3.7e-06 Score=82.92 Aligned_cols=97 Identities=18% Similarity=0.046 Sum_probs=76.3
Q ss_pred cEEEEEEECCeEEEEEEeEeeecccCcccccccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHH
Q 014721 68 FLMLVAEVGDEIVGMIRGCIKTVTCGKRISRNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEW 147 (419)
Q Consensus 68 ~~~lVAe~dgeiVG~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~ 147 (419)
..++|.+++.++++.+........+|. ...+.++|.+++++|+|||+|..++|+.+.++.
T Consensus 39 ~n~~vi~~nqkl~s~L~i~~f~~~f~~--------------------q~l~t~GIa~Vas~P~~R~~G~~~~Ll~~sLre 98 (389)
T COG4552 39 PNSYVIYMNQKLASRLHIPPFIFWFGN--------------------QVLPTAGIAGVASAPTYRRRGALRALLAHSLRE 98 (389)
T ss_pred CcceEEeehhhhhhcccccchheeeCC--------------------eeeeccceEEEEechhhccCcHHHHHHHHHHHH
Confidence 347888889999998766554433322 244789999999999999999999999999999
Q ss_pred HHHcCCcEEEEEEccCChHHHHHHHHhCCCEEeeeceeeeccc
Q 014721 148 FRESGVEYSYIATENDNYASVKLFTDKCGYSKFRTPSILVNPV 190 (419)
Q Consensus 148 a~~~G~~~i~l~t~~~N~~s~~lFY~K~GF~~~~~~~~~~~pv 190 (419)
.++.|...++|. +.+.+ ||+|+||+.+.+...+...+
T Consensus 99 ~~~kG~p~s~L~--P~s~~----iYrKfGye~asn~~~~~~d~ 135 (389)
T COG4552 99 IARKGYPVSALH--PFSGG----IYRKFGYEYASNYHELTFDV 135 (389)
T ss_pred HHHcCCeeEEec--cCchh----hHhhccccccceEEEeecch
Confidence 999999877664 44445 89999999999865554333
No 65
>KOG4135 consensus Predicted phosphoglucosamine acetyltransferase [Carbohydrate transport and metabolism]
Probab=98.22 E-value=2.5e-05 Score=68.18 Aligned_cols=162 Identities=16% Similarity=0.132 Sum_probs=102.8
Q ss_pred CcccccccccccccccccEEEEECCCcCcHHHHHHHHHHHccCC-CCCcchhhhhccChhhhhhcCCCcE-EEEEE--EC
Q 014721 1 MNLLENNMNMNVEMMMRNIVVREFDPNKDCLGVEDVERRCEVGP-SGKLCLFTDLLGDPICRVRHSPAFL-MLVAE--VG 76 (419)
Q Consensus 1 m~~~~~~m~m~~~m~~~~l~IR~~~~~~Dl~~I~eL~~~~e~~~-~g~~~l~~~~~~d~i~ri~~~p~~~-~lVAe--~d 76 (419)
|.+++|..-. ...+.+-+++ +...+.--+++...+... .+.+.+..+.--...+.++...... |+|.+ .+
T Consensus 1 MklNqNt~i~-----~~kvILVPYe-~~HV~kYHeWMknEelr~LT~SE~LtLdeEyeMQ~sW~~DeDKlTFIVLdaE~~ 74 (185)
T KOG4135|consen 1 MKLNQNTKIL-----GKKVILVPYE-PCHVPKYHEWMKNEELRRLTASEPLTLDEEYEMQKSWREDEDKLTFIVLDAEMN 74 (185)
T ss_pred CccccccEEe-----cceEEEeecc-ccchhHHHhHhhhHHHHHhhcCCCcchhHHHHhhhhhccCCcceEEEEEechhc
Confidence 5666665432 3557788999 999888877655542111 1112222111111133444444333 44442 11
Q ss_pred -------CeEEEEEEeEeeecccCcccccccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHH
Q 014721 77 -------DEIVGMIRGCIKTVTCGKRISRNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFR 149 (419)
Q Consensus 77 -------geiVG~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~ 149 (419)
...||-+-....+.+.... .......+.+.-+...|.-||+|||+..+..++.|+.
T Consensus 75 ea~~~ev~~MvGDvNlFlt~~~~~~n-----------------~s~~~~~gE~EvMIAEP~~RgKG~G~eav~~ml~y~~ 137 (185)
T KOG4135|consen 75 EAGEDEVDHMVGDVNLFLTTSPDTEN-----------------PSDDVITGEVEVMIAEPRGRGKGIGTEAVRAMLAYAY 137 (185)
T ss_pred ccCchhHhhhccceeeEEecCCCcCC-----------------cccceeeeeEEEEEecccccCCCccHHHHHHHHHHHH
Confidence 2356766555544321110 0123356787778889999999999999999999998
Q ss_pred Hc-CCcEEEEEEccCChHHHHHHHHhCCCEEeeeceee
Q 014721 150 ES-GVEYSYIATENDNYASVKLFTDKCGYSKFRTPSIL 186 (419)
Q Consensus 150 ~~-G~~~i~l~t~~~N~~s~~lFY~K~GF~~~~~~~~~ 186 (419)
.. +......-+..+|.+|+++ ++|++|+.+...+.+
T Consensus 138 s~l~l~Ky~vkig~~nk~sl~l-Fkk~~f~q~~~ns~f 174 (185)
T KOG4135|consen 138 SVLKLDKYEVKIGMDNKPSLRL-FKKFLFTQVFYNSSF 174 (185)
T ss_pred HHhhhheEEEEecCCCchHHHH-HHHhhheeeeeeccc
Confidence 65 8888888999999999997 799999999886554
No 66
>KOG4144 consensus Arylalkylamine N-acetyltransferase [General function prediction only]
Probab=98.17 E-value=5.9e-07 Score=78.65 Aligned_cols=144 Identities=14% Similarity=0.116 Sum_probs=88.0
Q ss_pred cEEEEECCCcCcHHHHHHHHHHHccCCCCCcchhhhhccChhhhhhcCCCc-EEEEE-------EECCeEEEEEEeEeee
Q 014721 18 NIVVREFDPNKDCLGVEDVERRCEVGPSGKLCLFTDLLGDPICRVRHSPAF-LMLVA-------EVGDEIVGMIRGCIKT 89 (419)
Q Consensus 18 ~l~IR~~~~~~Dl~~I~eL~~~~e~~~~g~~~l~~~~~~d~i~ri~~~p~~-~~lVA-------e~dgeiVG~i~~~~~~ 89 (419)
.+.||+.. ++|.+++..|+..+|..+. ....+.+. .|+...|.- ..+.+ ...+.+||+|.+...+
T Consensus 11 ~~~irp~i-~e~~q~~~~Lea~~FPe~e---rasfeii~---~r~i~~pevc~glf~~~~h~~~~~~~tLIghIigs~~~ 83 (190)
T KOG4144|consen 11 APRIRPGI-PESCQRRHTLEASEFPEDE---RASFEIIR---ERFISVPEVCPGLFDEIRHFLTLCEGTLIGHIIGSLWD 83 (190)
T ss_pred cccCCCCC-hHHHHHHhccccccCChhH---HHHHHHHH---HHHhcchhhcchhhhhHHhhhhhccccceehhhcccCc
Confidence 35699999 9999999999888873321 11111111 111111110 00111 1267899999877664
Q ss_pred cccCcccccccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcC-CcEEEEEEccCChHHH
Q 014721 90 VTCGKRISRNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESG-VEYSYIATENDNYASV 168 (419)
Q Consensus 90 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G-~~~i~l~t~~~N~~s~ 168 (419)
... .+..++ .+....+....|..|+|+|+||.+|.|+.|+...++..-++- ...+.|.....=.+
T Consensus 84 ~E~---------lt~ESm---~kh~s~g~ni~iHsl~Ihpa~rk~g~a~~Ll~~ylq~l~~q~i~~r~~Li~h~pLvP-- 149 (190)
T KOG4144|consen 84 KER---------LTQESM---TKHRSGGHNIHIHSLAIHPAFRKQGRAPILLWRYLQHLGSQPIVRRAALICHDPLVP-- 149 (190)
T ss_pred chh---------hhHHHH---hhhhcCCcceeEEEEEecHHHHhcCcchhHHHHHHHHhhcCccccceeeeecCCccc--
Confidence 321 111111 011223345899999999999999999999999888776552 23455555555555
Q ss_pred HHHHHhCCCEEeeece
Q 014721 169 KLFTDKCGYSKFRTPS 184 (419)
Q Consensus 169 ~lFY~K~GF~~~~~~~ 184 (419)
||+++||..++...
T Consensus 150 --FYEr~gFk~vgp~~ 163 (190)
T KOG4144|consen 150 --FYERFGFKAVGPCA 163 (190)
T ss_pred --hhHhcCceeecccc
Confidence 99999999888733
No 67
>PF12568 DUF3749: Acetyltransferase (GNAT) domain; InterPro: IPR024612 This domain is found in uncharacterised proteins from Gammaproteobacteria, and is approximately 40 amino acids in length. It contains two completely conserved residues (D and I) that may be functionally important. Proteins having this domain are frequently annotated as acetyltransferases of the GNAT family; however there is little accompanying annotation to confirm this.; PDB: 2K5T_A.
Probab=98.06 E-value=0.00018 Score=61.75 Aligned_cols=84 Identities=24% Similarity=0.418 Sum_probs=62.1
Q ss_pred cEEEEEEECCeEEEEEEeEeeecccCcccccccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHH
Q 014721 68 FLMLVAEVGDEIVGMIRGCIKTVTCGKRISRNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEW 147 (419)
Q Consensus 68 ~~~lVAe~dgeiVG~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~ 147 (419)
+.+|+|.-+++++|.+.+.... +.+.|..++|.+.-||+|+|+.|++++...
T Consensus 38 ~~l~aArFNdRlLgAv~v~~~~----------------------------~~~~L~~l~VRevTRrRGVG~yLlee~~rq 89 (128)
T PF12568_consen 38 HRLFAARFNDRLLGAVKVTISG----------------------------QQAELSDLCVREVTRRRGVGLYLLEEVLRQ 89 (128)
T ss_dssp EEEEEEEETTEEEEEEEEEEET----------------------------TEEEEEEEEE-TT-SSSSHHHHHHHHHHHH
T ss_pred CeEEEEEechheeeeEEEEEcC----------------------------cceEEeeEEEeeccccccHHHHHHHHHHHH
Confidence 6789999999999998776543 578899999999999999999999999887
Q ss_pred HHHcCCcEEEEEEc---cCChHHHHHHHHhCCCEEee
Q 014721 148 FRESGVEYSYIATE---NDNYASVKLFTDKCGYSKFR 181 (419)
Q Consensus 148 a~~~G~~~i~l~t~---~~N~~s~~lFY~K~GF~~~~ 181 (419)
+ -++....+... ..+.++...|...+||....
T Consensus 90 ~--p~i~~w~l~~~~~~~~~~~~~~~Fm~a~GF~~~~ 124 (128)
T PF12568_consen 90 L--PDIKHWWLADEGVEPQDRAVMAAFMQACGFSAQS 124 (128)
T ss_dssp S---S--EEEE--TT-S--THHHHHHHHHHHT-EE-S
T ss_pred C--CCCcEEEEecCCCcccchHHHHHHHHHcCccccC
Confidence 7 35666666543 34788888899999997544
No 68
>PF08444 Gly_acyl_tr_C: Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region; InterPro: IPR013652 This entry represents mammalian-specific glycine N-acyltransferase (also called aralkyl acyl-CoA:amino acid N-acyltransferase; 2.3.1.13 from EC). Mitochondrial acyltransferases catalyse the transfer of an acyl group from acyl-CoA to the N terminus of glycine to produce N-acylglycine. These enzymes can conjugate a multitude of substrates to form a variety of N-acylglycines. The CoA derivatives of a number of aliphatic and aromatic acids, but not phenylacetyl-CoA or (indol-3-yl)acetyl-CoA, can act as donor [, ].
Probab=97.96 E-value=2.1e-05 Score=63.36 Aligned_cols=58 Identities=19% Similarity=0.248 Sum_probs=51.4
Q ss_pred EEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChHHHHHHHHhCCCEEe
Q 014721 121 YILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYASVKLFTDKCGYSKF 180 (419)
Q Consensus 121 ~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~lFY~K~GF~~~ 180 (419)
++..-.+-|+|||||+.+.++....+.+.++|+ -+|..|..+|..++++ ..++||...
T Consensus 21 e~rmgyTlPeyR~~G~~~~v~~~~~~~L~~~g~-P~Y~hv~~~N~~~~r~-~~~lg~~~~ 78 (89)
T PF08444_consen 21 EMRMGYTLPEYRGQGLMSQVMYHLAQYLHKLGF-PFYGHVDEDNEASQRL-SKSLGFIFM 78 (89)
T ss_pred cccccccCHhHhcCCHHHHHHHHHHHHHHHCCC-CeEeehHhccHHHHHH-HHHCCCeec
Confidence 444445999999999999999999999999998 5789999999999998 799999854
No 69
>COG1444 Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only]
Probab=97.84 E-value=0.00014 Score=79.32 Aligned_cols=121 Identities=17% Similarity=0.174 Sum_probs=75.3
Q ss_pred hhhhhcCCCcEEEEEEECC-eEEEEEEeEeeecc--------cCcccccccccc-cCCCCCCCCCCCCCCeEEEEEEEEC
Q 014721 59 ICRVRHSPAFLMLVAEVGD-EIVGMIRGCIKTVT--------CGKRISRNTKYT-TNDIEPPKPLPVYTKLAYILGLRVS 128 (419)
Q Consensus 59 i~ri~~~p~~~~lVAe~dg-eiVG~i~~~~~~~~--------~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~I~~L~V~ 128 (419)
+.++.+.|.+.++++..++ .+|+++.+...... .+.....-.++. ....+.-.+......-.-|..|+||
T Consensus 461 L~~L~DaP~h~~~al~~~~~~~va~~qva~EG~l~~~~i~~~~~g~r~~GnlIp~~l~~~~~~~~fa~l~G~RIvRIAvh 540 (758)
T COG1444 461 LRRLLDAPHHHIFALRAPEGKPVAVWQVAEEGGLSDELIDIWLGGRRPRGNLIPDLLAKHHRDPEFAKLVGWRIVRIAVH 540 (758)
T ss_pred HHHHhcCCCCeeEEEEcCCCceEEEEEeeccCCCcHHHHHHHhcCCCCCCcccHHHHHHhhcchhhcccceeeEEEEEeC
Confidence 4556678889999998776 77777654432210 000000000000 0000000111223356679999999
Q ss_pred cchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChHHHHHHHHhCCCEEeee
Q 014721 129 PSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYASVKLFTDKCGYSKFRT 182 (419)
Q Consensus 129 P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~lFY~K~GF~~~~~ 182 (419)
|++|++|||++|++.+.++++ .|++.+ .+.-.-..++.-|+.|+||.+++-
T Consensus 541 Pe~q~~GiGsrlL~~l~~~a~-~~~Dwl--gvsFG~t~~L~rFW~rnGF~pVhl 591 (758)
T COG1444 541 PELQRMGIGSRLLALLIEEAR-KGLDWL--GVSFGYTEELLRFWLRNGFVPVHL 591 (758)
T ss_pred HHHHhcCHHHHHHHHHHHHHh-cCCCEE--eeccCCCHHHHHHHHHcCeEEEEe
Confidence 999999999999999999997 566655 444444455556999999999876
No 70
>PF14542 Acetyltransf_CG: GCN5-related N-acetyl-transferase; PDB: 2H5M_A 2Q44_A 1XMT_A 2Q4Y_A 2IL4_A 2EVN_A 1R57_A.
Probab=97.84 E-value=0.0001 Score=58.29 Aligned_cols=38 Identities=32% Similarity=0.444 Sum_probs=33.2
Q ss_pred CeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcE
Q 014721 118 KLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEY 155 (419)
Q Consensus 118 ~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~ 155 (419)
+...|....|.|++||||||++|++.++++++++|.+.
T Consensus 21 ~~~~i~hT~V~~~~rGqGia~~L~~~~l~~a~~~~~kv 58 (78)
T PF14542_consen 21 GVIVITHTEVPPELRGQGIAKKLVEAALDYARENGLKV 58 (78)
T ss_dssp SEEEEEEEEE-CSSSTTTHHHHHHHHHHHHHHHTT-EE
T ss_pred CEEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCEE
Confidence 67788999999999999999999999999999999853
No 71
>COG3818 Predicted acetyltransferase, GNAT superfamily [General function prediction only]
Probab=97.66 E-value=0.00013 Score=62.40 Aligned_cols=141 Identities=15% Similarity=0.150 Sum_probs=95.7
Q ss_pred EEEEECCCcCcHHHHHHHHHHHccC-CCCCcchhhhhccChhhhhhcCCCcEEEEEEECCeEEEEEEeEeeecccCcccc
Q 014721 19 IVVREFDPNKDCLGVEDVERRCEVG-PSGKLCLFTDLLGDPICRVRHSPAFLMLVAEVGDEIVGMIRGCIKTVTCGKRIS 97 (419)
Q Consensus 19 l~IR~~~~~~Dl~~I~eL~~~~e~~-~~g~~~l~~~~~~d~i~ri~~~p~~~~lVAe~dgeiVG~i~~~~~~~~~g~~~~ 97 (419)
+.||... ..|..++..|.++.... .|-. .+|..+.-.. .|+|+.+|.+-|++.....+......
T Consensus 8 ~~~~D~~-apd~aavLaLNNeha~elswLe-----------~erL~~l~~e-AF~ArR~G~l~afl~tFd~~a~ydSp-- 72 (167)
T COG3818 8 ILIRDVR-APDLAAVLALNNEHALELSWLE-----------LERLYRLYKE-AFVARRDGNLAAFLVTFDSSARYDSP-- 72 (167)
T ss_pred eehhhhc-CCchhhHHhccchhhhhccccC-----------HHHHHHHHHH-HHHHhhccchhhheeeccccccCCCC--
Confidence 4577777 77999999986665221 1211 1222111101 25788888877777544332211000
Q ss_pred cccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEE--ccCChHHHHHHHHhC
Q 014721 98 RNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIAT--ENDNYASVKLFTDKC 175 (419)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t--~~~N~~s~~lFY~K~ 175 (419)
.-..-...|.+..||..+.|...-||+|+|++|.+.+.++++..|+.++...+ ...|.+|.. |-..+
T Consensus 73 ----------NFlWFrErYe~F~YvDRvVVA~~aRGrG~aRalY~Dlf~~Ae~agy~~~tCEVn~Dppnpasda-FHaal 141 (167)
T COG3818 73 ----------NFLWFRERYENFFYVDRVVVASRARGRGVARALYADLFSYAELAGYPYLTCEVNLDPPNPASDA-FHAAL 141 (167)
T ss_pred ----------ceeehhhhCCceEEEEEEEEEecccccchHHHHHHHHHHHHHhcCCceEEEEecCCCCChHHHH-Hhhhc
Confidence 00001235778999999999999999999999999999999999999888775 566888776 89999
Q ss_pred CCEEeeecee
Q 014721 176 GYSKFRTPSI 185 (419)
Q Consensus 176 GF~~~~~~~~ 185 (419)
||.++++..+
T Consensus 142 GF~eVG~a~i 151 (167)
T COG3818 142 GFHEVGQATI 151 (167)
T ss_pred CceEccceEE
Confidence 9999998544
No 72
>PF13480 Acetyltransf_6: Acetyltransferase (GNAT) domain
Probab=97.63 E-value=0.0013 Score=56.24 Aligned_cols=115 Identities=17% Similarity=0.139 Sum_probs=77.0
Q ss_pred EEEEECCCcCcHHHHHHHHHHHccCC-CCC-cchhhhhccChhhhhhcCCCcEEEEEEECCeEEEEEEeEeeecccCccc
Q 014721 19 IVVREFDPNKDCLGVEDVERRCEVGP-SGK-LCLFTDLLGDPICRVRHSPAFLMLVAEVGDEIVGMIRGCIKTVTCGKRI 96 (419)
Q Consensus 19 l~IR~~~~~~Dl~~I~eL~~~~e~~~-~g~-~~l~~~~~~d~i~ri~~~p~~~~lVAe~dgeiVG~i~~~~~~~~~g~~~ 96 (419)
+.++..+.++|++.+.++........ ... .....+.+.+.+..........++++..+|++||+..+....
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~g~~va~~~~~~~~------- 92 (142)
T PF13480_consen 20 VRFEVATDPADLEAFYELYRESWARRHGGFAPPFSRDFFRDLLRSLAESGRLRLFVLYDGGEPVAFALGFRHG------- 92 (142)
T ss_pred EEEEEeCCHHHHHHHHHHHHHHHhhhhCCCCCcchHHHHHHHHHhhccCCCEEEEEEEECCEEEEEEEEEEEC-------
Confidence 55665544788999988887652222 111 122223333222222223345577888899999998665443
Q ss_pred ccccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEc
Q 014721 97 SRNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATE 161 (419)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~ 161 (419)
...+.....++|+++..++|..|+.++++++.++|++.+-+...
T Consensus 93 ---------------------~~~~~~~~g~~~~~~~~~~~~~l~~~~i~~a~~~g~~~~d~g~g 136 (142)
T PF13480_consen 93 ---------------------GTLYYWYGGYDPEYRKYSPGRLLLWEAIRWAIERGLRYFDFGGG 136 (142)
T ss_pred ---------------------CEEEEEEEEECHhhHhCCHHHHHHHHHHHHHHHCCCCEEEECCC
Confidence 45566777789999999999999999999999999988866543
No 73
>COG2388 Predicted acetyltransferase [General function prediction only]
Probab=97.43 E-value=0.00051 Score=56.70 Aligned_cols=64 Identities=25% Similarity=0.150 Sum_probs=50.8
Q ss_pred CCcEEEEEEECCeEEEEEEeEeeecccCcccccccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHH
Q 014721 66 PAFLMLVAEVGDEIVGMIRGCIKTVTCGKRISRNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRME 145 (419)
Q Consensus 66 p~~~~lVAe~dgeiVG~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~ 145 (419)
.....+++.++|+.+|.+.-... ......|..-.|.+++||||||++|+..++
T Consensus 13 ~~~~~y~~~~~G~~~~e~~y~~~---------------------------~~~~i~i~HT~V~d~lrGqGia~~L~~~al 65 (99)
T COG2388 13 GENGRYVLTDEGEVIGEATYYDR---------------------------GENLIIIDHTYVPDELRGQGIAQKLVEKAL 65 (99)
T ss_pred cCceEEEEecCCcEEEEEEEecC---------------------------CCCEEEEecCcCCHHHcCCcHHHHHHHHHH
Confidence 44668888889998998633322 114567778889999999999999999999
Q ss_pred HHHHHcCCcEE
Q 014721 146 EWFRESGVEYS 156 (419)
Q Consensus 146 ~~a~~~G~~~i 156 (419)
+.+++.|.+.+
T Consensus 66 ~~ar~~g~kii 76 (99)
T COG2388 66 EEAREAGLKII 76 (99)
T ss_pred HHHHHcCCeEc
Confidence 99999998655
No 74
>COG0454 WecD Histone acetyltransferase HPA2 and related acetyltransferases [Transcription / General function prediction only]
Probab=97.35 E-value=0.0003 Score=55.20 Aligned_cols=44 Identities=34% Similarity=0.569 Sum_probs=39.7
Q ss_pred EEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChHHHHHHHHhCCC
Q 014721 125 LRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYASVKLFTDKCGY 177 (419)
Q Consensus 125 L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~lFY~K~GF 177 (419)
+.|+|+|||+|||++|++.++++++..|+. .|..+.. +|++.||
T Consensus 87 l~v~~~~rg~Gig~~Ll~~~~~~~~~~g~~--------~~~~~~~-~~~~~~~ 130 (156)
T COG0454 87 LYVLPEYRGKGIGSALLEAALEWARKRGIS--------LNRLALE-VYEKNGF 130 (156)
T ss_pred EEecchhhccchHHHHHHHHHHHHHHcCce--------ehHHHHH-HHHhcCC
Confidence 899999999999999999999999998774 6777777 5999998
No 75
>COG3375 Uncharacterized conserved protein [Function unknown]
Probab=97.22 E-value=0.0031 Score=58.86 Aligned_cols=130 Identities=21% Similarity=0.127 Sum_probs=87.2
Q ss_pred EEEEECCCcCcHHHHHHHHHHHccCCCCCcchhhhhccChhhhhhcCCCcEEEEEEEC-CeEEEEEEeEeeecccCcccc
Q 014721 19 IVVREFDPNKDCLGVEDVERRCEVGPSGKLCLFTDLLGDPICRVRHSPAFLMLVAEVG-DEIVGMIRGCIKTVTCGKRIS 97 (419)
Q Consensus 19 l~IR~~~~~~Dl~~I~eL~~~~e~~~~g~~~l~~~~~~d~i~ri~~~p~~~~lVAe~d-geiVG~i~~~~~~~~~g~~~~ 97 (419)
++||.++.+.++++++++.........- ..+.. |-+..+++ ..+..+.|..+ |++||...+.+- +.
T Consensus 3 vvvrrl~dp~el~~~~dV~~~aWg~~d~-~~~~~----d~i~al~~-~GGlvlgAf~~dg~lVGls~G~pg-----~r-- 69 (266)
T COG3375 3 VVVRRLTDPAELDEAEDVQASAWGSEDR-DGAPA----DTIRALRY-HGGLVLGAFSADGRLVGLSYGYPG-----GR-- 69 (266)
T ss_pred eeEEecCCHHHHHHHHHHHHHHhCcccc-ccchH----HHHHHHHh-cCCeEEEEEcCCCcEEEEEeccCC-----cC--
Confidence 5688888788999999987776433221 12222 22333333 33667777765 599999865541 10
Q ss_pred cccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChHHHHHHHHhCCC
Q 014721 98 RNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYASVKLFTDKCGY 177 (419)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~lFY~K~GF 177 (419)
...-..|-+.++|.|++|+.|+|-+|=..--+++..+|++.+..+-.+-|.---++...|+|-
T Consensus 70 -----------------~g~~y~ySH~~gV~e~~k~sglg~aLK~~Qre~a~~~G~tli~WTfDPl~alNA~fNi~KLGa 132 (266)
T COG3375 70 -----------------GGSLYLYSHMLGVREEVKGSGLGVALKMKQRERALSMGYTLIAWTFDPLNALNARFNISKLGA 132 (266)
T ss_pred -----------------CCceeeeeeehhccccccccchhhhhHHHHHHHHHhcCeeeEEEecccchhhhhhcchhhhce
Confidence 011245667789999999999999999999999999999988777666655433344577775
Q ss_pred E
Q 014721 178 S 178 (419)
Q Consensus 178 ~ 178 (419)
.
T Consensus 133 ~ 133 (266)
T COG3375 133 I 133 (266)
T ss_pred e
Confidence 4
No 76
>COG3053 CitC Citrate lyase synthetase [Energy production and conversion]
Probab=97.21 E-value=0.0051 Score=59.68 Aligned_cols=58 Identities=29% Similarity=0.405 Sum_probs=52.6
Q ss_pred EEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChHHHHHHHHhCCCEEeee
Q 014721 121 YILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYASVKLFTDKCGYSKFRT 182 (419)
Q Consensus 121 ~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~lFY~K~GF~~~~~ 182 (419)
-|-.++|+|.+||-|++.+|+.++++.+-++|...+++.|-..+.. |++.+||.....
T Consensus 58 vikcvAvs~s~qGeGl~lkl~TeLin~ay~~g~~hLFiyTKp~~~~----lFk~~GF~~i~~ 115 (352)
T COG3053 58 VIKCVAVSESLQGEGLALKLVTELINLAYERGRTHLFIYTKPEYAA----LFKQCGFSEIAS 115 (352)
T ss_pred eeEEEEechhcccccHHHHHHHHHHHHHHHcCCceEEEEechhHHH----HHHhCCceEeec
Confidence 3566899999999999999999999999999999999999988777 589999998765
No 77
>PRK10456 arginine succinyltransferase; Provisional
Probab=96.65 E-value=0.013 Score=58.60 Aligned_cols=126 Identities=13% Similarity=0.062 Sum_probs=69.1
Q ss_pred EEEEECCCcCcHHHHHHHHHHHccC---CCCCcchhhhhccChhhhh----hcCCCcEEEEEEE--CCeEEEEEEeEeee
Q 014721 19 IVVREFDPNKDCLGVEDVERRCEVG---PSGKLCLFTDLLGDPICRV----RHSPAFLMLVAEV--GDEIVGMIRGCIKT 89 (419)
Q Consensus 19 l~IR~~~~~~Dl~~I~eL~~~~e~~---~~g~~~l~~~~~~d~i~ri----~~~p~~~~lVAe~--dgeiVG~i~~~~~~ 89 (419)
+.||+++ ..|++++.+|......+ -+.........+..-.... ...+..++||.|+ .|+|||+..+...-
T Consensus 2 ~vvRpv~-~~Dl~aL~~LA~~sG~G~TsLP~d~~~L~~rI~~S~~sF~~~~~~~~~~YlFVLED~~tg~vvGts~I~a~v 80 (344)
T PRK10456 2 MVIRPVE-RSDLAALMQLAGKTGGGLTSLPANEATLAARIERALKTWQGELPKSEQGYVFVLEDSETGTVAGICAIEVAV 80 (344)
T ss_pred eEEecCc-cccHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHhcCcCCCCCccEEEEEEeCCCCcEEEEEeEEecc
Confidence 6799999 99999999997777432 2222222211111111111 1134456788886 59999997555442
Q ss_pred ccc-CcccccccccccCC--CCCCC------CCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHH
Q 014721 90 VTC-GKRISRNTKYTTND--IEPPK------PLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRME 145 (419)
Q Consensus 90 ~~~-g~~~~~~~~~~~~~--~~~~~------~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~ 145 (419)
-.. .+.........+.+ .+... ..-.+...-.|.+|.++|+||+.|.|+.|-+.-.
T Consensus 81 G~~~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfl~p~~R~~~~G~LLSr~Rf 145 (344)
T PRK10456 81 GLNDPWYNYRVGTLVHASKELNVYNALPTLFLSNDHTGSSELCTLFLDPDWRKEGNGYLLSKSRF 145 (344)
T ss_pred cCCCCCEEEEcCceeecCcccCCceeeeeEEeeccCCCCceeEEEEECHHHcCCCchhHHHHHHH
Confidence 110 01101000111111 11111 1113556778999999999999999988766543
No 78
>PF04958 AstA: Arginine N-succinyltransferase beta subunit; InterPro: IPR007041 Arginine N-succinyltransferase catalyses the transfer of succinyl-CoA to arginine to produce succinylarginine. This is the first step in arginine catabolism via the arginine succinyltransferase pathway. Six major L-arginine-degrading pathways have been described for prokaryotes []. Many bacteria arginine succinyltransferase 2.3.1.109 from EC, which is the AstA protein of the succinyltransferase (ast) pathway operon consists of five genes. In a few species, such as Pseudomonas aeruginosa, a tandem gene pair encodes alpha and beta subunits of a heterodimer that is designated arginine and ornithine succinyltransferase (AOST). This entry represents the family of proteins that make up the beta subunit of the heterodimer of Ast and AOST.; GO: 0008791 arginine N-succinyltransferase activity, 0006527 arginine catabolic process; PDB: 1YLE_A.
Probab=96.62 E-value=0.0041 Score=62.27 Aligned_cols=157 Identities=15% Similarity=0.059 Sum_probs=74.8
Q ss_pred cEEEEECCCcCcHHHHHHHHHHHccC---CCCCcchhhhhccChhhhhh--c----CCCcEEEEEEE--CCeEEEEEEeE
Q 014721 18 NIVVREFDPNKDCLGVEDVERRCEVG---PSGKLCLFTDLLGDPICRVR--H----SPAFLMLVAEV--GDEIVGMIRGC 86 (419)
Q Consensus 18 ~l~IR~~~~~~Dl~~I~eL~~~~e~~---~~g~~~l~~~~~~d~i~ri~--~----~p~~~~lVAe~--dgeiVG~i~~~ 86 (419)
|+.||+++ .+|++++.+|......+ -+.........+..-..... . .+..++||.|+ .|+|||+..+.
T Consensus 1 M~viRp~~-~~Dl~aL~~LA~~sg~G~TsLP~d~~~L~~rI~~S~~sFa~~~~~~~~~~~YlfVLED~~tg~vvGts~I~ 79 (342)
T PF04958_consen 1 MLVIRPAR-PSDLDALYALARESGPGFTSLPPDREALAERIERSERSFAGRDVDFPGDEGYLFVLEDTETGEVVGTSAIE 79 (342)
T ss_dssp -EEEEE---GGGHHHHHHHHHHS-TT-TTS-S-HHHHHHHHHHHHHHHH-TT----S--EEEEEEEETTT--EEEEEEEE
T ss_pred CeEEecCc-hhhHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHhhccccCCCCccceEEEEEecCCCcEEEEEeEE
Confidence 46799999 99999999997776332 12222222222111111110 1 13356788886 49999997554
Q ss_pred eeecccC-cccccccccccCC--CCCC------CCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHH---cCCc
Q 014721 87 IKTVTCG-KRISRNTKYTTND--IEPP------KPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRE---SGVE 154 (419)
Q Consensus 87 ~~~~~~g-~~~~~~~~~~~~~--~~~~------~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~---~G~~ 154 (419)
..--... +.........+.+ .+.. ...-.+.....|.+|.++|+||+.|.|+.|-+.-.-...+ +=.+
T Consensus 80 a~vG~~~PfY~yr~~~~vh~S~~L~v~~~~~~L~L~~d~tG~sEl~tLfL~p~~R~~~~G~lLSr~RfLFiA~~~~rF~~ 159 (342)
T PF04958_consen 80 AAVGLDEPFYSYRVSTLVHASRELGVRNRHETLTLSNDYTGCSELCTLFLDPDYRGGGNGRLLSRSRFLFIAQHRERFAD 159 (342)
T ss_dssp SSTTSSS---EEEEEEEEEEETTTTEEEEEEEEEEE-TTTTSEEEEEEEE-GGGTTSHHHHHHHHHHHHHHHH-GGGS-S
T ss_pred eccCCCCCcEEEEcCceeEcCcccCCccceeeEeeecCCCCCeeeEEEEECHHHcCCchHHHHHHHHHHHHHhChhhcch
Confidence 4321100 0000000000000 0000 0111255678999999999999999999988766554443 2233
Q ss_pred EEEEE----EccCChHHHHHHHHhCCCE
Q 014721 155 YSYIA----TENDNYASVKLFTDKCGYS 178 (419)
Q Consensus 155 ~i~l~----t~~~N~~s~~lFY~K~GF~ 178 (419)
.+... +..++. ..|++.+|-.
T Consensus 160 ~viAElrG~~De~G~---SPFWdalG~~ 184 (342)
T PF04958_consen 160 RVIAELRGVSDEDGR---SPFWDALGRH 184 (342)
T ss_dssp EEEEE--B---TT------HHHHHTGGG
T ss_pred heeeeccCCcCCCCC---CchHHHhhcc
Confidence 44333 222222 2488888754
No 79
>TIGR03694 exosort_acyl putative PEP-CTERM/exosortase system-associated acyltransferase. Members of this protein family are restricted to bacterial species with the PEP-CTERM/exosortase system predicted to act in exopolysaccharide-associated protein targeting. PSI-BLAST and CDD reveal relationships to the acyltransferase family that includes N-acyl-L-homoserine lactone synthetase. Several members of this family may be found in a single genome. These proteins likely contribute to chemical modifications in exopolysaccharide and biofilm structural material production.
Probab=96.59 E-value=0.044 Score=52.66 Aligned_cols=153 Identities=14% Similarity=-0.006 Sum_probs=87.6
Q ss_pred EEEEECCCcCcHHHHHHHHHHHccCCCCCcchhhhhccChhhhhhcCCCcEEEEEEE-CCeEEEEEEeEeeeccc---Cc
Q 014721 19 IVVREFDPNKDCLGVEDVERRCEVGPSGKLCLFTDLLGDPICRVRHSPAFLMLVAEV-GDEIVGMIRGCIKTVTC---GK 94 (419)
Q Consensus 19 l~IR~~~~~~Dl~~I~eL~~~~e~~~~g~~~l~~~~~~d~i~ri~~~p~~~~lVAe~-dgeiVG~i~~~~~~~~~---g~ 94 (419)
+.++.+.+.++++++..|....|....+.........+..+...- .....+++... +|++||+++....+... .+
T Consensus 8 ~~v~~a~~~~~~~~~~~lR~~VFv~e~gw~~~~~~~~~~E~D~~D-~~~~h~l~~~~~~g~vvG~~RLl~t~~~~p~~~~ 86 (241)
T TIGR03694 8 FEIIPAVTPELLEEAFRLRYQVYCEELGFEPPSDYPDGLETDEYD-AHSVHSLLRHRRTGTFVGCVRLVLPNSSDPDQPF 86 (241)
T ss_pred EEEEEcCCHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCC-CCCcEEEEEECCCCCEEEEEEEeccccccccccc
Confidence 567777756778899998888865433311000000000001111 12233444433 58999999988753110 01
Q ss_pred c--cccccccccCCCCCCC-CCCCCCCeEEEEEEEECcchhcC--------C--------------------HHHHHHHH
Q 014721 95 R--ISRNTKYTTNDIEPPK-PLPVYTKLAYILGLRVSPSHRRM--------G--------------------IGLKLVKR 143 (419)
Q Consensus 95 ~--~~~~~~~~~~~~~~~~-~~~~~~~~~~I~~L~V~P~yRgk--------G--------------------IG~~Ll~~ 143 (419)
. ..+...+... .+. .......+.++..++|+|+||++ | +...|+..
T Consensus 87 p~e~~~~~~~~~~---~~~~~~~~~~~i~E~SRf~V~~~~r~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ 163 (241)
T TIGR03694 87 PFEKHCSHSLDGL---FLDPRRLPRSRIAEVSRLAVSKDFRRRKGEKLKPSGVGVIETEAPFSESERRRFPHIPLGLYLG 163 (241)
T ss_pred cHHHHhccccchh---hcCccccCCCceEEeehheECHhHhCCcccccccccccccccccccchhhcccCchHHHHHHHH
Confidence 0 0010000000 000 00123579999999999999974 2 56789999
Q ss_pred HHHHHHHcCCcEEEEEEccCChHHHHHHHHhCCCEE
Q 014721 144 MEEWFRESGVEYSYIATENDNYASVKLFTDKCGYSK 179 (419)
Q Consensus 144 ~~~~a~~~G~~~i~l~t~~~N~~s~~lFY~K~GF~~ 179 (419)
+.+++.++|+++++..+... -.++ ++++|+..
T Consensus 164 ~~~~a~~~Gi~~~~~v~~~~---l~r~-l~r~G~~~ 195 (241)
T TIGR03694 164 LIALSSANGITHWYAIMEPR---LARL-LSRFGIQF 195 (241)
T ss_pred HHHHHHHCCCcEEEEEeCHH---HHHH-HHHhCCce
Confidence 99999999999998887765 2334 79999754
No 80
>PRK13834 putative autoinducer synthesis protein; Provisional
Probab=96.34 E-value=0.07 Score=50.08 Aligned_cols=139 Identities=14% Similarity=0.025 Sum_probs=81.9
Q ss_pred cCcHHHHHHHHHHHccCCCCCcchhhhhccChhhhh-hcCCCcEEEEEE-ECCeEEEEEEeEeeecccCccccccccccc
Q 014721 27 NKDCLGVEDVERRCEVGPSGKLCLFTDLLGDPICRV-RHSPAFLMLVAE-VGDEIVGMIRGCIKTVTCGKRISRNTKYTT 104 (419)
Q Consensus 27 ~~Dl~~I~eL~~~~e~~~~g~~~l~~~~~~d~i~ri-~~~p~~~~lVAe-~dgeiVG~i~~~~~~~~~g~~~~~~~~~~~ 104 (419)
.++++++..|-...|....+-.-... +..+.- .+.+...++++. .+|++||+++....+.+. .+.+.|..
T Consensus 15 ~~~l~~~~rLR~~VF~~elgW~~~~~----~g~E~D~yD~~~~~yll~~~~~g~vvG~~RLlptt~p~----ml~~~fp~ 86 (207)
T PRK13834 15 ASLLKQMHRLRARVFGGRLGWDVSIT----DGEERDQFDDLKPTYILAISDSGRVAGCARLLPAIGPT----MLAQVFPQ 86 (207)
T ss_pred HHHHHHHHHHHHHHhccccCCCCCCC----CCcCccCCCCCCCEEEEEEeCCCeEEEEEecccCCCcc----hhhhhcHH
Confidence 46677777777777654322110000 101111 111223344444 568999999988665321 11111211
Q ss_pred CCCCCCCCCCCCCCeEEEEEEEECcchhcC---C----HHHHHHHHHHHHHHHcCCcEEEEEEccCChHHHHHHHHhCCC
Q 014721 105 NDIEPPKPLPVYTKLAYILGLRVSPSHRRM---G----IGLKLVKRMEEWFRESGVEYSYIATENDNYASVKLFTDKCGY 177 (419)
Q Consensus 105 ~~~~~~~~~~~~~~~~~I~~L~V~P~yRgk---G----IG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~lFY~K~GF 177 (419)
.... ...+....+.++..++|+|++++. + +...|+..+.+++..+|+++++..+... -.++ ++++|+
T Consensus 87 l~~~--~~~~~~~~v~E~SRf~V~~~~~~~~~~~~~~~~~~~L~~~~~~~a~~~Gi~~~~~v~~~~---~~r~-l~r~G~ 160 (207)
T PRK13834 87 LLPA--GRLNAHPAMIESSRFCVDTALAEGRGGGQLHEATLTMFAGIIEWSMANGYTEIVTATDLR---FERI-LARAGW 160 (207)
T ss_pred hcCC--CCCCCCCCEEEEeeeEEcccccccccccccCHHHHHHHHHHHHHHHHCCCCEEEEEECHH---HHHH-HHHcCC
Confidence 1100 011234579999999999986422 2 6678999999999999999998777664 3345 799998
Q ss_pred EE
Q 014721 178 SK 179 (419)
Q Consensus 178 ~~ 179 (419)
..
T Consensus 161 ~~ 162 (207)
T PRK13834 161 PM 162 (207)
T ss_pred Ce
Confidence 64
No 81
>PF00765 Autoind_synth: Autoinducer synthetase; InterPro: IPR001690 Bacterial species have many methods of controlling gene expression and cell growth. Regulation of gene expression in response to changes in cell density is termed quorum sensing [, ]. Quorum-sensing bacteria produce, release and respond to hormone-like molecules (autoinducers) that accumulate in the external environment as the cell population grows. Once a threshold of these molecules is reached, a signal transduction cascade is triggered that ultimately leads to behavioural changes in the bacterium []. Autoinducers are thus clearly important mediators of molecular communication. Conjugal transfer of Agrobacterium octopine-type Ti plasmids is activated by octopine, a metabolite released from plant tumours []. Octopine causes conjugal donors to secrete a pheromone, Agrobacterium autoinducer (AAI), and exogenous AAI further stimulates conjugation. The putative AAI synthase and an AAI-responsive transcriptional regulator have been found to be encoded by the Ti plasmid traI and traR genes, respectively. TraR and TraI are similar to the LuxR and LuxI regulatory proteins of Vibrio fischeri, and AAI is similar in structure to the diffusable V. fischeri autoinducer, the inducing ligand of LuxR. TraR activates target genes in the presence of AAI and also activates traR and traI themselves, creating two positive-feedback loops. TraR-AAI-mediated activation in wild-type Agrobacterium strains is enhanced by culturing on solid media, suggesting a possible role in cell density sensing []. Production of light by the marine bacterium V. fischeri and by recombinant hosts containing cloned lux genes is controlled by the density of the culture []. Density-dependent regulation of lux gene expression has been shown to require a locus consisting of the luxR and luxI genes. In these and other Gram-negative bacteria, N-(3-oxohexanoyl)-L-homoserine lactone (OHHL) acts as the autoinducer by binding to transcriptional regulatory proteins and activating them []. OHHL and related molecules, such as N-butanoyl- (BHL), N-hexanoyl- (HHL) and N-oxododecanoyl- (PAI) homoserine lactones, are produced by a family of proteins that share a high level of sequence similarity. Proteins which currently members of this family include: luxI from V. fischeri. ahyI and asaI from Aeromonas species, which synthesize BHL and whose targets are ahyR and asaR respectively. carI from Erwinia carotovora. The target of OHHL is carR which activates genes involved in the biosynthesis of carbapenem antibiotics. eagI from Enterobacter agglomerans. The target of OHHL is not yet known. esaI from Erwinia stewartii. expI from Erwinia carotovora. lasI from Pseudomonas aeruginosa, which synthesizes PAI and whose target is lasR which activates the transcription of the elastase gene. rhlI (or vsmI) from P. aeruginosa, which synthesizes BHL and HHL and whose target is rhlR. swrI from Serratia liquefaciens, which synthesizes BHL. yenI from Yersinia enterocolitica. ; GO: 0007165 signal transduction; PDB: 3P2H_A 3P2F_A 1KZF_A 1K4J_A 1RO5_A.
Probab=96.30 E-value=0.053 Score=49.84 Aligned_cols=137 Identities=18% Similarity=0.161 Sum_probs=82.4
Q ss_pred cCcHHHHHHHHHHHccCCCCCc-----chhhhhccChhhhhhcCCCcEEEEEEECCeEEEEEEeEeeecccCcccccccc
Q 014721 27 NKDCLGVEDVERRCEVGPSGKL-----CLFTDLLGDPICRVRHSPAFLMLVAEVGDEIVGMIRGCIKTVTCGKRISRNTK 101 (419)
Q Consensus 27 ~~Dl~~I~eL~~~~e~~~~g~~-----~l~~~~~~d~i~ri~~~p~~~~lVAe~dgeiVG~i~~~~~~~~~g~~~~~~~~ 101 (419)
.++++++..+-...|...-+-. ....|+.++ +...++++.++|+++|+++..+.+.+. .+.+.
T Consensus 7 ~~~l~~~~rlR~~vFv~rlgW~v~~~dg~E~DqyD~--------~~~~ylv~~~~g~v~g~~RLlptt~p~----ML~~~ 74 (182)
T PF00765_consen 7 RRLLEEMFRLRHRVFVDRLGWDVPCEDGMEIDQYDD--------PDAVYLVALDDGRVVGCARLLPTTGPY----MLSDV 74 (182)
T ss_dssp HHHHHHHHHHHHHHHTTCSCCCHHCCTSEE--TTGC--------TT-EEEEEEETTEEEEEEEEEETTS------HHHHC
T ss_pred HHHHHHHHHHHHHHHHHhhCCCCcCCCCcEeeecCC--------CCCeEEEEEECCEEEEEeeeccCCCcc----hhhhH
Confidence 4667788888777776542211 111122222 334456677789999999998876431 11122
Q ss_pred cccCCCCCCCCCCCCCCeEEEEEEEECcchhc------CCHHHHHHHHHHHHHHHcCCcEEEEEEccCChHHHHHHHHhC
Q 014721 102 YTTNDIEPPKPLPVYTKLAYILGLRVSPSHRR------MGIGLKLVKRMEEWFRESGVEYSYIATENDNYASVKLFTDKC 175 (419)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRg------kGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~lFY~K~ 175 (419)
|.....+ .+.+....+.++..++|+|+.++ .-+...|+..+.+++.++|++.++..+... -.++ ++++
T Consensus 75 F~~ll~~--~~~p~~~~vwE~SRf~v~~~~~~~~~~~~~~~~~~L~~~~~e~a~~~gi~~~v~V~~~~---~~r~-l~r~ 148 (182)
T PF00765_consen 75 FPHLLPD--GPAPRSPDVWELSRFCVDPDRRRSRAGSRSPVTMELLLGMVEFALSNGIRHIVGVVDPA---MERI-LRRA 148 (182)
T ss_dssp TGGGHTT--S---SSTTEEEEEEEEE-HCCCHHCHSCC-THHHHHHHHHHHHHHCTT-SEEEEEEEHH---HHHH-HHHC
T ss_pred HHHHhCC--CCCCCCCcceeeeEEEEcccccccccccccHHHHHHHHHHHHHHHHCCCCEEEEEEChH---HHHH-HHHc
Confidence 2211111 11233457899999999998542 247789999999999999999998777544 4554 8999
Q ss_pred CCEEee
Q 014721 176 GYSKFR 181 (419)
Q Consensus 176 GF~~~~ 181 (419)
||....
T Consensus 149 G~~~~~ 154 (182)
T PF00765_consen 149 GWPVRR 154 (182)
T ss_dssp T-EEEE
T ss_pred CCceEE
Confidence 998553
No 82
>PF01233 NMT: Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain; InterPro: IPR022676 Myristoyl-CoA:protein N-myristoyltransferase (2.3.1.97 from EC) (Nmt) [] is the enzyme responsible for transferring a myristate group on the N-terminal glycine of a number of cellular eukaryotics and viral proteins. Nmt is a monomeric protein of about 50 to 60kDa whose sequence appears to be well conserved. The N and C-terminal domains of NMT are structurally similar, each adopting an acyl-CoA N-acyltransferase-like fold. This entry represents the N-terminal region. ; GO: 0004379 glycylpeptide N-tetradecanoyltransferase activity; PDB: 2P6G_B 2P6F_F 2P6E_A 1IIC_A 1IID_A 2NMT_A 4A33_A 3H5Z_A 4A2Z_A 2WSA_A ....
Probab=96.04 E-value=0.13 Score=46.03 Aligned_cols=63 Identities=19% Similarity=0.182 Sum_probs=50.5
Q ss_pred CCeEEEEEEeEeeecccCcccccccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcE
Q 014721 76 GDEIVGMIRGCIKTVTCGKRISRNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEY 155 (419)
Q Consensus 76 dgeiVG~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~ 155 (419)
.+++||||.+.+....... ...++.+|.-|+||+.+|.++++--|++++-.++...|.-+
T Consensus 87 ~~kLvgfIsaip~~irv~~--------------------~~~~~~eINFLCVhKklRskrlAPvLIkEItRRvn~~gI~q 146 (162)
T PF01233_consen 87 SKKLVGFISAIPATIRVRD--------------------KVIKMVEINFLCVHKKLRSKRLAPVLIKEITRRVNLQGIWQ 146 (162)
T ss_dssp TTEEEEEEEEEEEEEEETT--------------------EEEEEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHHTTT--E
T ss_pred CCEEEEEEccceEEEEEee--------------------eEeeeeeEEEEeecHhHhhcCCcHHHHHHHHHHhhhcCcee
Confidence 6999999999988764321 23478999999999999999999999999999998888765
Q ss_pred EEE
Q 014721 156 SYI 158 (419)
Q Consensus 156 i~l 158 (419)
+.-
T Consensus 147 Avy 149 (162)
T PF01233_consen 147 AVY 149 (162)
T ss_dssp EEE
T ss_pred eee
Confidence 533
No 83
>COG5628 Predicted acetyltransferase [General function prediction only]
Probab=96.01 E-value=0.079 Score=45.00 Aligned_cols=80 Identities=19% Similarity=0.125 Sum_probs=54.3
Q ss_pred EEEEECCeEEEEEEeEeeecccCcccccccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHH
Q 014721 71 LVAEVGDEIVGMIRGCIKTVTCGKRISRNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRE 150 (419)
Q Consensus 71 lVAe~dgeiVG~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~ 150 (419)
+....+|.+||++.+--+.- . .+.-.-.+..+.+-..|||+|+|++..+++-....
T Consensus 40 ~~~~~~~~~igf~l~L~~~~---~--------------------~~~iD~~~~efFIi~k~~~~GvGR~aaK~If~~~~- 95 (143)
T COG5628 40 WLFRIGGLPVGFALVLDLAH---S--------------------PTPIDRAVAEFFIVRKHRRRGVGRAAAKAIFGSAW- 95 (143)
T ss_pred eEEEECCceeeeeeeecccC---C--------------------CCcccccchheEeeehhhccchhHHHHHHHHHHhh-
Confidence 44456999999997654331 1 11112234456788899999999999988866543
Q ss_pred cCCcEEEEEEccCChHHHHHHHHhCCCE
Q 014721 151 SGVEYSYIATENDNYASVKLFTDKCGYS 178 (419)
Q Consensus 151 ~G~~~i~l~t~~~N~~s~~lFY~K~GF~ 178 (419)
|. -.+.+..+|.+|+. |+++.-+.
T Consensus 96 -g~--w~Va~i~EN~PA~~-fwK~~~~t 119 (143)
T COG5628 96 -GV--WQVATVRENTPARA-FWKRVAET 119 (143)
T ss_pred -ce--EEEEEeccCChhHH-HHHhhhcc
Confidence 43 34578899999999 67876554
No 84
>TIGR03827 GNAT_ablB putative beta-lysine N-acetyltransferase. Members of this protein family are GNAT family acetyltransferases, based on a seed alignment in which every member is associated with a lysine 2,3-aminomutase family protein, usually as the adjacent gene. This family includes AblB, the enzyme beta-lysine acetyltransferase that completes the two-step synthesis of the osmolyte (compatible solute) N-epsilon-acetyl-beta-lysine; all members of the family may have this function. Note that N-epsilon-acetyl-beta-lysine has been observed only in methanogenic archaea (e.g. Methanosarcina) but that this model, paired with TIGR03820, suggests a much broader distribution.
Probab=95.98 E-value=0.15 Score=49.52 Aligned_cols=46 Identities=9% Similarity=0.059 Sum_probs=39.4
Q ss_pred CCHHHHHHHHHHHHHHHcCCcEEEEEEccCChHHHHHHHHhCCCEEeeec
Q 014721 134 MGIGLKLVKRMEEWFRESGVEYSYIATENDNYASVKLFTDKCGYSKFRTP 183 (419)
Q Consensus 134 kGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~lFY~K~GF~~~~~~ 183 (419)
.|-...|+..+++.|+++|+..+++-+..++.. .+++.||...+..
T Consensus 20 ~~~~~~~~~~~~~~a~~~~~~ki~~~~~~~~~~----~~~~~g~~~e~~i 65 (266)
T TIGR03827 20 GNDVEALIPDLDALAKKEGYTKIIAKVPGSDKP----LFEERGYLEEAKI 65 (266)
T ss_pred CccHHHHHHHHHHHHHHcCCcEEEEEccHHHHH----HHHHCCCeEEEec
Confidence 466889999999999999999999998888755 4799999998553
No 85
>PF13880 Acetyltransf_13: ESCO1/2 acetyl-transferase
Probab=95.85 E-value=0.01 Score=45.77 Aligned_cols=30 Identities=43% Similarity=0.608 Sum_probs=26.3
Q ss_pred eEEEEEEEECcchhcCCHHHHHHHHHHHHH
Q 014721 119 LAYILGLRVSPSHRRMGIGLKLVKRMEEWF 148 (419)
Q Consensus 119 ~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a 148 (419)
...|..|.|+|.+|++||+++|++.+.+.+
T Consensus 5 ~~GI~RIWV~~~~RR~GIAt~Lld~ar~~~ 34 (70)
T PF13880_consen 5 VCGISRIWVSPSHRRKGIATRLLDAARENF 34 (70)
T ss_pred EEEeEEEEeChhhhhhhHHHHHHHHHHHhc
Confidence 457888999999999999999999987754
No 86
>TIGR03243 arg_catab_AOST arginine and ornithine succinyltransferase subunits. In many bacteria, the sole member of this protein family is arginine N-succinyltransferase (EC 2.3.1.109), the AstA protein of the arginine succinyltransferase (ast) pathway. However, in Pseudomonas aeruginosa and several other species, a tandem gene pair encodes alpha and beta subunits of a heterodimer that is designated arginine and ornithine succinyltransferase (AOST).
Probab=95.81 E-value=0.051 Score=54.28 Aligned_cols=124 Identities=13% Similarity=0.022 Sum_probs=67.6
Q ss_pred EEECCCcCcHHHHHHHHHHHccC---CCCCcchhhhhccChhhh----hhcCCCcEEEEEEE--CCeEEEEEEeEeeecc
Q 014721 21 VREFDPNKDCLGVEDVERRCEVG---PSGKLCLFTDLLGDPICR----VRHSPAFLMLVAEV--GDEIVGMIRGCIKTVT 91 (419)
Q Consensus 21 IR~~~~~~Dl~~I~eL~~~~e~~---~~g~~~l~~~~~~d~i~r----i~~~p~~~~lVAe~--dgeiVG~i~~~~~~~~ 91 (419)
||+++ ..|++++.+|......+ -+.........+..-... ....+..+.||.|+ .|+|||+..+...--.
T Consensus 2 vRpv~-~~Dl~aL~~LA~~sg~G~TsLP~d~~~L~~rI~~S~~sF~~~~~~~~~~YlFVLED~~tg~vvGts~I~a~vG~ 80 (335)
T TIGR03243 2 VRPVR-TSDLDALMQLARESGIGLTSLPADRAALGSRIARSEKSFAGESTRGEEGYLFVLEDTETGTVAGVSAIEAAVGL 80 (335)
T ss_pred cccCc-cccHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHHhcccCCCCccEEEEEEeCCCCeEEEEEeEEecccC
Confidence 79999 99999999997777432 222222222111111111 11134466778886 5999999755544211
Q ss_pred c-CcccccccccccCC--CCCCC------CCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHH
Q 014721 92 C-GKRISRNTKYTTND--IEPPK------PLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRME 145 (419)
Q Consensus 92 ~-g~~~~~~~~~~~~~--~~~~~------~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~ 145 (419)
. .+.........+.+ .+... ..-.+...-.|.+|.++|+||+.|.|+.|-+.-.
T Consensus 81 ~~PfY~yrv~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfL~p~~R~~~~G~LLSr~Rf 143 (335)
T TIGR03243 81 DEPFYNYRVGTLVHASRELGVYNKIPTLTLSNDLTGSSELCTLFLDPDYRKGGNGRLLSRSRF 143 (335)
T ss_pred CCCCEEEEcCceeecCcccCCccceeeEEeeccCCCCeeeEEEEECHHHcCCCchhhHHHHHH
Confidence 0 11111111111111 11111 1113556778999999999999999988876543
No 87
>TIGR03245 arg_AOST_alph arginine/ornithine succinyltransferase, alpha subunit. In some bacteria, including Pseudomonas aeruginosa, the astB gene (arginine N-succinyltransferase) is replaced by tandem paralogs that form a heterodimer. This heterodimer from P. aeruginosa is characterized as arginine and ornithine N-2 succinyltransferase (AOST). Members of this protein family represent the less widespread paralog, designated AruI, or arginine/ornithine succinyltransferase, alpha subunit.
Probab=95.72 E-value=0.057 Score=53.98 Aligned_cols=124 Identities=12% Similarity=0.055 Sum_probs=67.8
Q ss_pred EEECCCcCcHHHHHHHHHHHccC---CCCCcchhhhhccChhhhh-----hcCCCcEEEEEEE--CCeEEEEEEeEeeec
Q 014721 21 VREFDPNKDCLGVEDVERRCEVG---PSGKLCLFTDLLGDPICRV-----RHSPAFLMLVAEV--GDEIVGMIRGCIKTV 90 (419)
Q Consensus 21 IR~~~~~~Dl~~I~eL~~~~e~~---~~g~~~l~~~~~~d~i~ri-----~~~p~~~~lVAe~--dgeiVG~i~~~~~~~ 90 (419)
||+++ ..|++++.+|......+ .+.........+..-.... ...+..++||.|+ .|+|||+..+...--
T Consensus 2 iRpv~-~~Dl~aL~~LA~~sG~G~TsLP~d~~~L~~rI~~S~~sF~~~~~~~~~~~YlFVLEDt~tg~vvGts~I~a~vG 80 (336)
T TIGR03245 2 VRPSR-FADLPAIERLANESAIGVTSLPADRAKLGEKIAQSERSFAAEVSFVGEERYLFVLEDTETGKLLGTSSIVASAG 80 (336)
T ss_pred cccCc-cccHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHHHhhcCCCCCccEEEEEEeCCCCcEEEEEeEEeccc
Confidence 79999 99999999997777432 2222222221111111111 1133466788886 599999976554421
Q ss_pred cc-CcccccccccccCC--CCCCC------CCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHH
Q 014721 91 TC-GKRISRNTKYTTND--IEPPK------PLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRME 145 (419)
Q Consensus 91 ~~-g~~~~~~~~~~~~~--~~~~~------~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~ 145 (419)
.. .+.........+.+ .+... ..-.+...-.|.+|.++|+||+-|.|+.|-+.-.
T Consensus 81 ~~~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfL~p~~R~~~~G~lLSr~Rf 144 (336)
T TIGR03245 81 YGEPFYSYRNDTLIHASRELKVNNKIHVLYMCHELTGSSLLCSFYVDPRLRKTEAAELLSRARL 144 (336)
T ss_pred CCCCCEEEEcCceeecCcccCCccceeeEEeeccCCCCeeeEEEEECHHHcCCCchhHHHHHHH
Confidence 10 11111111111111 11111 1123556778999999999999999988766543
No 88
>TIGR03244 arg_catab_AstA arginine N-succinyltransferase. In many bacteria, the arginine succinyltransferase (ast) pathway operon consists of five genes, including this protein, arginine N-succinyltransferase (EC 2.3.1.109). In a few species, such as Pseudomonas aeruginosa, the member of this family is encoded adjacent to a paralog, and the two polypeptides form a heterodimeric enzyme, active on both arginine and ornithine. In such species, this polypeptide may be treated as the beta subunit of an enzyme that may be named either arginine N-succinyltransferase (AST) or arginine and orthithine N-succinyltransferase (AOST).
Probab=95.68 E-value=0.056 Score=54.07 Aligned_cols=123 Identities=15% Similarity=0.044 Sum_probs=66.9
Q ss_pred EEECCCcCcHHHHHHHHHHHccC---CCCCcchhhhhccChhhhh----hcCCCcEEEEEEE--CCeEEEEEEeEeeecc
Q 014721 21 VREFDPNKDCLGVEDVERRCEVG---PSGKLCLFTDLLGDPICRV----RHSPAFLMLVAEV--GDEIVGMIRGCIKTVT 91 (419)
Q Consensus 21 IR~~~~~~Dl~~I~eL~~~~e~~---~~g~~~l~~~~~~d~i~ri----~~~p~~~~lVAe~--dgeiVG~i~~~~~~~~ 91 (419)
||+++ ..|++++.+|......+ .+.........+..-.... ...+..+.||.|+ .|+|||+..+...--.
T Consensus 2 vRPv~-~~Dl~aL~~LA~~sg~G~TsLP~d~~~L~~rI~~S~~sF~~~~~~~~~~YlFVLEDt~tg~vvGts~I~a~vG~ 80 (336)
T TIGR03244 2 VRPVE-TSDLDALYQLAQSTGIGLTSLPANEDLLSARIERAEKTFSGELTRAEQGYLFVLEDTETGTVAGVSAIEAAVGL 80 (336)
T ss_pred cccCc-cccHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHhcCcCCCCCccEEEEEEeCCCCeEEEEEeEEecccC
Confidence 79999 99999999997777432 2222222221111111111 1123466788886 5999998755443211
Q ss_pred c-CcccccccccccCC--CCCCC------CCCCCCCeEEEEEEEECcchhcCCHHHHHHHHH
Q 014721 92 C-GKRISRNTKYTTND--IEPPK------PLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRM 144 (419)
Q Consensus 92 ~-g~~~~~~~~~~~~~--~~~~~------~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~ 144 (419)
. .+.........+.+ .+.+. ..-.+...-.|.+|.++|+||+.|.|+.|-+.-
T Consensus 81 ~~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~SElctLfL~p~~R~~~~G~LLSr~R 142 (336)
T TIGR03244 81 EEPFYNYRVGTVVHASKELGIYKALETLFLSNDLTGYSELCTLFLDPDYRKGGNGRLLSKSR 142 (336)
T ss_pred CCCCEEEEcCceeecCcccCCceeeeeEEeeccCCCCeeeEEEEECHHHcCCcchhhHHHHH
Confidence 0 01101111111111 11111 111355677899999999999999998876654
No 89
>PF06852 DUF1248: Protein of unknown function (DUF1248); InterPro: IPR009658 This entry represents a conserved region within a number of proteins of unknown function that seem to be specific to Caenorhabditis elegans. Note that some proteins in the entry contain more than one copy of this region.
Probab=95.58 E-value=0.29 Score=44.96 Aligned_cols=106 Identities=13% Similarity=0.125 Sum_probs=61.2
Q ss_pred CeEEEEEEeEeeecccCcccccccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEE
Q 014721 77 DEIVGMIRGCIKTVTCGKRISRNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYS 156 (419)
Q Consensus 77 geiVG~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i 156 (419)
.++|+.+..+...... + .......+++...++|+|||+|+++.+-+.+.+..+..+-. +
T Consensus 56 ~~via~~~~~~~~~l~-------------------~-~~d~pl~~~G~~w~~p~yRg~~~~kl~~~~~~~~~~~~~~N-~ 114 (181)
T PF06852_consen 56 DRVIATVHLIRFDPLN-------------------P-SPDKPLQFIGFFWIDPEYRGKGIMKLQDDICMDELDSVDDN-S 114 (181)
T ss_pred CcEEEEEEEEEeccCC-------------------C-CCCCCeEEEeeeeeCCcccCcchHHHHHHHHHHHhccCCCc-e
Confidence 6799998877654211 0 11245778888999999999999964444444444333322 2
Q ss_pred EEEEccCChHHHHHHHHhCCCEEeeeceeeecccccccccCC-----cceeeeec
Q 014721 157 YIATENDNYASVKLFTDKCGYSKFRTPSILVNPVFAHRLIVP-----KQVTIIQL 206 (419)
Q Consensus 157 ~l~t~~~N~~s~~lFY~K~GF~~~~~~~~~~~pv~~~~~~~~-----~~v~i~~l 206 (419)
+...|..+.+.+-+-+||...+....|.--.......+| .++.++..
T Consensus 115 ---~~~~~~~~~~~w~k~~G~~~~~h~~~y~S~y~~~d~~IP~~L~~~gi~vKna 166 (181)
T PF06852_consen 115 ---VAQGNVKMSNFWHKMFGFDDYGHDWYYVSYYDPDDVKIPENLDTDGITVKNA 166 (181)
T ss_pred ---eeecCHHHHHHHHHHhCCCCCccceeEeeeccHHHeeccCccCcCceEeccc
Confidence 224566667743345799888774444322223333455 34455543
No 90
>PF05301 Mec-17: Touch receptor neuron protein Mec-17; InterPro: IPR007965 Mec-17 is the protein product of one of the 18 genes required for the development and function of the touch receptor neuron for gentle touch. Mec-17 is specifically required for maintaining the differentiation of the touch receptor []. This family is conserved to higher eukaryotes.; GO: 0019799 tubulin N-acetyltransferase activity
Probab=94.95 E-value=0.2 Score=42.65 Aligned_cols=53 Identities=25% Similarity=0.284 Sum_probs=39.1
Q ss_pred CeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChHHHHHHHHh
Q 014721 118 KLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYASVKLFTDK 174 (419)
Q Consensus 118 ~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~lFY~K 174 (419)
...+|..+.|+++.||+|+|++|.+.+++.- +.....++.+.....-+. |.+|
T Consensus 45 ~~~cvLDFyVhes~QR~G~Gk~LF~~ML~~e---~~~p~~~a~DrPS~Kll~-Fl~K 97 (120)
T PF05301_consen 45 PLLCVLDFYVHESRQRRGYGKRLFDHMLQEE---NVSPHQLAIDRPSPKLLS-FLKK 97 (120)
T ss_pred ccceeeeEEEEeceeccCchHHHHHHHHHHc---CCCcccceecCCcHHHHH-HHHH
Confidence 3458899999999999999999999998754 555555666666555444 5444
No 91
>PRK14852 hypothetical protein; Provisional
Probab=94.56 E-value=0.42 Score=54.26 Aligned_cols=158 Identities=11% Similarity=-0.001 Sum_probs=100.9
Q ss_pred ccEEEEECCCcCcHHHHHHHHHHHccCCCCCcchhhhhccChhhhhhcCCCcEEEEEEECCeEEEEEEeEeeecccCccc
Q 014721 17 RNIVVREFDPNKDCLGVEDVERRCEVGPSGKLCLFTDLLGDPICRVRHSPAFLMLVAEVGDEIVGMIRGCIKTVTCGKRI 96 (419)
Q Consensus 17 ~~l~IR~~~~~~Dl~~I~eL~~~~e~~~~g~~~l~~~~~~d~i~ri~~~p~~~~lVAe~dgeiVG~i~~~~~~~~~g~~~ 96 (419)
....||.+++.+|+..+..|........ |... ..-......++...|....|++...++++|.....+.+...|..
T Consensus 27 dr~~~r~Aet~~e~~~~~~L~~~~Y~~~-Gy~~--~~ps~~~~~~~~~lp~t~~~i~k~~~~~l~T~t~~~ds~~~Gl~- 102 (989)
T PRK14852 27 DRPAIKIAETPDEYTRAFRLVYEEYIRS-GYLK--PHPSRMYYNVWSILPATSVFIFKSYHDVLCTLTHIPDSGLFGLP- 102 (989)
T ss_pred cCcceeecCCHHHHHHHHHHHHHHHHHc-CCCC--cCcccccCCccccCCcceEEEeccCCcEEEEEEEecCCcccCcC-
Confidence 4467899998899999999877773221 1110 01111112333445666667776667777777666554333332
Q ss_pred ccccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChHHHHHHHH-hC
Q 014721 97 SRNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYASVKLFTD-KC 175 (419)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~lFY~-K~ 175 (419)
.|..|..... . -.....+++.+..++++|+.|.+-+--.|++.+.+++...+++.+.+.+.+...+ ||+ -+
T Consensus 103 -~D~lf~~eLd-~--lr~~Gr~v~EvtrLa~d~~~~~~~l~~~l~~~~~~y~~~~~~dd~~i~VnPkH~~----FY~r~l 174 (989)
T PRK14852 103 -MDTLYKPEVD-A--LRAQGRNVVEVGALATQYSRRWTNLMVFLAKAMFQYSMMSEVDDILVTVNPKHVK----FYTDIF 174 (989)
T ss_pred -HHHHHHHHHH-H--HHHcCCeEEeeehheechhhcccchhHHHHHHHHHHHHHcCCCeEEEEECcchHH----HHHHHh
Confidence 1111110000 0 0011337899999999998888777778888888888888999999999988777 998 58
Q ss_pred CCEEeeeceee
Q 014721 176 GYSKFRTPSIL 186 (419)
Q Consensus 176 GF~~~~~~~~~ 186 (419)
||+.++....+
T Consensus 175 ~f~~ig~~r~~ 185 (989)
T PRK14852 175 LFKPFGEVRHY 185 (989)
T ss_pred CCccccccccC
Confidence 99999875433
No 92
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=94.18 E-value=0.15 Score=53.03 Aligned_cols=130 Identities=14% Similarity=0.181 Sum_probs=87.5
Q ss_pred EEEEECCCcCcHHHHHHHHHHHccCCCCCcchhhhhccChhhhhhcCCCcEEEEEEE-----CCeEEEEEEeEeeecccC
Q 014721 19 IVVREFDPNKDCLGVEDVERRCEVGPSGKLCLFTDLLGDPICRVRHSPAFLMLVAEV-----GDEIVGMIRGCIKTVTCG 93 (419)
Q Consensus 19 l~IR~~~~~~Dl~~I~eL~~~~e~~~~g~~~l~~~~~~d~i~ri~~~p~~~~lVAe~-----dgeiVG~i~~~~~~~~~g 93 (419)
+++++++ ..++++|.+|.......+-....+ .+.-.+++.+.+....+-... |+-+||++....+.
T Consensus 414 l~vs~~d-e~~i~RIsQLtqkTNQFnlTtkRy----~e~dV~~~~~~~~~li~sv~l~DKfgDnGiigvviv~kk~---- 484 (574)
T COG3882 414 LTVSKFD-EVNIPRISQLTQKTNQFNLTTKRY----NEEDVRQMQEDPNFLIFSVSLKDKFGDNGIIGVVIVEKKE---- 484 (574)
T ss_pred EEEeecc-ccCcHHHHHHhhcccceeechhhh----cHHHHHHHhhCCCeEEEEEEeccccccCceEEEEEEEecC----
Confidence 6689999 999999999976663332221122 222244455556555554332 46689988666554
Q ss_pred cccccccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEE--EccCChHHHHHH
Q 014721 94 KRISRNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIA--TENDNYASVKLF 171 (419)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~--t~~~N~~s~~lF 171 (419)
+...|..+..+-.-=|++|-++|+..+++.+...|...+... .+.-|.+-.. |
T Consensus 485 ------------------------~~w~IDt~lmSCRVlgRkvE~~l~~~~~e~A~~~gi~tir~~Y~pt~kN~pv~~-F 539 (574)
T COG3882 485 ------------------------SEWFIDTFLMSCRVLGRKVEQRLMNSLEEQALSEGINTIRGYYIPTEKNAPVSD-F 539 (574)
T ss_pred ------------------------CeEEhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcceeeeEecccccCCcHHH-H
Confidence 223444444555556999999999999999999999887765 4566777454 8
Q ss_pred HHhCCCEEeee
Q 014721 172 TDKCGYSKFRT 182 (419)
Q Consensus 172 Y~K~GF~~~~~ 182 (419)
|+++||+..++
T Consensus 540 yE~mgf~l~~e 550 (574)
T COG3882 540 YERMGFKLKGE 550 (574)
T ss_pred HHHhccccccc
Confidence 99999996655
No 93
>COG1243 ELP3 Histone acetyltransferase [Transcription / Chromatin structure and dynamics]
Probab=93.80 E-value=0.08 Score=54.65 Aligned_cols=61 Identities=21% Similarity=0.222 Sum_probs=47.3
Q ss_pred CCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChHHHHHHHHhCCCEEeee
Q 014721 116 YTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYASVKLFTDKCGYSKFRT 182 (419)
Q Consensus 116 ~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~lFY~K~GF~~~~~ 182 (419)
|+...-|.. . .-.||.+|+|+.|+++++..|++.|.+.+.+..... +. .+|+|+||+..+-
T Consensus 449 yg~~vpig~-~-~~~~QH~G~G~~L~~~AE~ia~ee~~~ki~viSgiG---~R-eYy~k~GY~~~gp 509 (515)
T COG1243 449 YGSEVPIGK-R-EDEWQHRGYGRELLEEAERIAREEGAKKILVISGIG---VR-EYYRKLGYELDGP 509 (515)
T ss_pred ccccccccc-C-cchhhcccHHHHHHHHHHHHHHhhccccEEEEeccc---HH-HHHHHhCccccCC
Confidence 444444555 3 678999999999999999999999988886655554 33 3899999997764
No 94
>TIGR03019 pepcterm_femAB FemAB-related protein, PEP-CTERM system-associated. Members of this protein family are found always as part of extended exopolysaccharide biosynthesis loci in bacteria. In nearly every case, these loci contain determinants for the processing of the PEP-CTERM proposed C-terminal protein sorting signal. This family shows remote, local sequence similarity to the FemAB protein family (see pfam02388), whose members
Probab=93.76 E-value=1.9 Score=43.07 Aligned_cols=134 Identities=9% Similarity=-0.048 Sum_probs=81.0
Q ss_pred cEEEEECCCcCcHHHHHHHHHHHccCCCCCcchhhhhccChhhhhhcCCCcEEEEEE-ECCeEEEEEEeEeeecccCccc
Q 014721 18 NIVVREFDPNKDCLGVEDVERRCEVGPSGKLCLFTDLLGDPICRVRHSPAFLMLVAE-VGDEIVGMIRGCIKTVTCGKRI 96 (419)
Q Consensus 18 ~l~IR~~~~~~Dl~~I~eL~~~~e~~~~g~~~l~~~~~~d~i~ri~~~p~~~~lVAe-~dgeiVG~i~~~~~~~~~g~~~ 96 (419)
.++++. .+|++...++........ |......+.+....... .....++++. .+|++||.+......
T Consensus 151 Gv~v~~---~~~l~~F~~l~~~t~~r~-g~p~~~~~~f~~l~~~~--~~~~~l~~a~~~~g~~va~~l~~~~~------- 217 (330)
T TIGR03019 151 GLTVTV---DGDLDRFYDVYAENMRDL-GTPVFSRRYFRLLKDVF--GEDCEVLTVRLGDGVVASAVLSFYFR------- 217 (330)
T ss_pred CeEEEE---CCcHHHHHHHHHHHHhcC-CCCCCCHHHHHHHHHhc--ccCEEEEEEEeCCCCEEEEEEEEEeC-------
Confidence 466765 245888888777653211 11111112221111111 1223356677 689999876544322
Q ss_pred ccccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChHHHHHHHHhCC
Q 014721 97 SRNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYASVKLFTDKCG 176 (419)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~lFY~K~G 176 (419)
+..+....+.+++++..+-+..|.-++++++.++|++..-+.....|....+ |-++.|
T Consensus 218 ---------------------~~~~~~~~g~~~~~~~~~~~~lL~w~~i~~a~~~G~~~fDfG~s~~~~G~~~-FK~~~G 275 (330)
T TIGR03019 218 ---------------------DEVLPYYAGGLREARDVAANDLMYWELMRRACERGLRVFDFGRSKRGTGPFK-FKKNWG 275 (330)
T ss_pred ---------------------CEEEEEeccChHHHHhhChHHHHHHHHHHHHHHCCCcEEEcCCCCCCCccHH-HHhcCC
Confidence 1122223356899999999999999999999999999988865444444333 667889
Q ss_pred CEEeeeceee
Q 014721 177 YSKFRTPSIL 186 (419)
Q Consensus 177 F~~~~~~~~~ 186 (419)
+++......+
T Consensus 276 ~~~~~l~~~~ 285 (330)
T TIGR03019 276 FEPQPLHYEY 285 (330)
T ss_pred CeeccceEEE
Confidence 9987765544
No 95
>COG3138 AstA Arginine/ornithine N-succinyltransferase beta subunit [Amino acid transport and metabolism]
Probab=93.57 E-value=0.2 Score=48.73 Aligned_cols=122 Identities=20% Similarity=0.135 Sum_probs=65.1
Q ss_pred EEEEECCCcCcHHHHHHHHHHHccCCCCCcchhhhhccChhhhh--------hcCCCcEEEEEEE--CCeEEEEEEeEee
Q 014721 19 IVVREFDPNKDCLGVEDVERRCEVGPSGKLCLFTDLLGDPICRV--------RHSPAFLMLVAEV--GDEIVGMIRGCIK 88 (419)
Q Consensus 19 l~IR~~~~~~Dl~~I~eL~~~~e~~~~g~~~l~~~~~~d~i~ri--------~~~p~~~~lVAe~--dgeiVG~i~~~~~ 88 (419)
+.+||++ ..|++++.+|......+-..... ..+.+.+.+.+- .......++|.|+ .|++||+..+...
T Consensus 2 lvvRP~~-~aDl~al~~LA~~sg~G~TsLP~-de~~L~~Ri~~se~sf~~~~~~ge~~Y~fVLEDsetG~VvG~saI~a~ 79 (336)
T COG3138 2 LVVRPVE-RADLEALMELAVKTGVGLTSLPA-DEATLRARIERSEKSFQGELPPGEAGYLFVLEDSETGTVVGISAIEAA 79 (336)
T ss_pred ccccccc-ccCHHHHHHHHHhcCCCcccCCC-CHHHHHHHHHHHHHHHhcccCCCCccEEEEEEecCCceEEeEEEEEEe
Confidence 5689999 99999999998877443221111 112222222221 2234566788887 5999998754433
Q ss_pred ec-ccCcccccccccccCC--CCCCCCCC------CCCCeEEEEEEEECcchhcCCHHHHHHH
Q 014721 89 TV-TCGKRISRNTKYTTND--IEPPKPLP------VYTKLAYILGLRVSPSHRRMGIGLKLVK 142 (419)
Q Consensus 89 ~~-~~g~~~~~~~~~~~~~--~~~~~~~~------~~~~~~~I~~L~V~P~yRgkGIG~~Ll~ 142 (419)
-- ...+.......+.+.+ .......+ .......+..|.++|+||.-|.|+-|-+
T Consensus 80 vGl~~PfYsyRv~tlvhaS~~L~v~~~i~~L~L~Nd~TG~SEl~sLFl~pd~Rkg~nG~Llsr 142 (336)
T COG3138 80 VGLNDPFYSYRVGTLVHASPELNVYNEIPTLFLSNDLTGNSELCTLFLDPDWRKGGNGRLLSK 142 (336)
T ss_pred eccCCccceeeeeeeeecCccccccccceeEEEeccCcCchhhhheeecHHHhcccchhhhhh
Confidence 10 0011111111111111 11111111 1334667888999999998888876543
No 96
>KOG2036 consensus Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only]
Probab=93.10 E-value=0.2 Score=54.19 Aligned_cols=34 Identities=26% Similarity=0.453 Sum_probs=30.3
Q ss_pred eEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcC
Q 014721 119 LAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESG 152 (419)
Q Consensus 119 ~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G 152 (419)
-+.|..++|||+|+++|+|++-++-+.+++..++
T Consensus 614 GaRIVRIAvhP~y~~MGYGsrAvqLL~~y~eG~~ 647 (1011)
T KOG2036|consen 614 GARIVRIAVHPEYQKMGYGSRAVQLLTDYFEGKF 647 (1011)
T ss_pred CceEEEEEeccchhccCccHHHHHHHHHHHhccC
Confidence 4678999999999999999999999999987653
No 97
>PF13444 Acetyltransf_5: Acetyltransferase (GNAT) domain
Probab=91.66 E-value=0.63 Score=38.26 Aligned_cols=66 Identities=24% Similarity=0.311 Sum_probs=40.3
Q ss_pred EEEEECC-eEEEEEEeEeeecccCccc-ccccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHH
Q 014721 71 LVAEVGD-EIVGMIRGCIKTVTCGKRI-SRNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLV 141 (419)
Q Consensus 71 lVAe~dg-eiVG~i~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll 141 (419)
+++.+++ ++||+++........+... .....+. .+++.+ ...+.++|..++|+|+||+......|+
T Consensus 33 ~lv~~~~~~~VGt~Rl~~~~~~~~~~~~~~~~~f~---l~~~~~--~~~~~~EisRl~V~~~~R~~~~~~~L~ 100 (101)
T PF13444_consen 33 LLVRDKNTEVVGTVRLILPSPAGPLEGFYSESEFD---LDPLLP--LPRRVAEISRLCVHPEYRRRKVLLLLW 100 (101)
T ss_pred EEEEECCCCEEEEEEeeccccccccccCCchhhcC---cchhhc--cCCcEEEeehheECHhHCCChHHHHHh
Confidence 4443444 5999998887765321111 1111111 111222 234899999999999999998888876
No 98
>KOG3698 consensus Hyaluronoglucosaminidase [Posttranslational modification, protein turnover, chaperones]
Probab=91.21 E-value=0.68 Score=49.00 Aligned_cols=165 Identities=13% Similarity=0.145 Sum_probs=94.6
Q ss_pred cEEEEECCCcCcHHHHHHHHHHHccCCCCCcch--hhhhccCh-hhhhhcCCCcEEEEEEE-CCeEEEEEEeEeeecccC
Q 014721 18 NIVVREFDPNKDCLGVEDVERRCEVGPSGKLCL--FTDLLGDP-ICRVRHSPAFLMLVAEV-GDEIVGMIRGCIKTVTCG 93 (419)
Q Consensus 18 ~l~IR~~~~~~Dl~~I~eL~~~~e~~~~g~~~l--~~~~~~d~-i~ri~~~p~~~~lVAe~-dgeiVG~i~~~~~~~~~g 93 (419)
-+.||+++ ..|-+.|..+...-.........+ ..+..+|- +.-......+.++|+++ +++|||++++...-..+.
T Consensus 679 ~y~iRPy~-~~De~~v~~~ct~my~d~g~~lpf~n~pn~~~d~liggllsls~~lC~v~~de~~~i~gYa~a~~Dvt~F~ 757 (891)
T KOG3698|consen 679 FYDIRPYT-IADEEYVSGMCTVMYTDNGELLPFRNAPNFADDNLIGGLLSLSEHLCEVVDDEGHKIVGYASAHFDVTLFS 757 (891)
T ss_pred eEeeccCc-cccHHHHHhhhhheeccCceeccCCCCCccccccchhheeccChhheeeeecCCCceeEEeeeecccchhh
Confidence 47899999 999999999876653222111111 11222221 11122333356777765 577999998766533221
Q ss_pred cc------ccccccccc---C----------------CCCCCC------CCC--CCCCeEEEEEEEECcchhcCCHHHHH
Q 014721 94 KR------ISRNTKYTT---N----------------DIEPPK------PLP--VYTKLAYILGLRVSPSHRRMGIGLKL 140 (419)
Q Consensus 94 ~~------~~~~~~~~~---~----------------~~~~~~------~~~--~~~~~~~I~~L~V~P~yRgkGIG~~L 140 (419)
.. ..+.++++. . +-++-+ +.+ .......+....++.+--.-|+.+++
T Consensus 758 rn~~i~w~~~l~EKY~~~i~p~~~g~~~~~~~e~i~~S~h~~~~~~~~~~~P~~~~~nfPa~v~~~~~~~a~D~~~~k~m 837 (891)
T KOG3698|consen 758 RNFLITWKEKLKEKYRGLIEPIGSGKLTDEYIEFIQNSQHPMDIEEWYPKIPDQIFENFPAWVETYFGMDASDAHPMKKM 837 (891)
T ss_pred hceeeeeHHHHHHHhhccccccCCchhHHHHHHHHHHccCccchhhccccCcHHHHhcChHHHhhccccccccchHHHHH
Confidence 11 000111110 0 000000 000 00111111112234444467999999
Q ss_pred HHHHHHHHHHcCCcEEEEEEccCChHHHHHHHHhCCCEEeeece
Q 014721 141 VKRMEEWFRESGVEYSYIATENDNYASVKLFTDKCGYSKFRTPS 184 (419)
Q Consensus 141 l~~~~~~a~~~G~~~i~l~t~~~N~~s~~lFY~K~GF~~~~~~~ 184 (419)
++-++..++.+|....++.+..+..+-++ ||.++|+...+...
T Consensus 838 ~~vll~tL~aNGsrGaf~~V~~dD~~~~~-fys~lG~~d~~~~e 880 (891)
T KOG3698|consen 838 IQVLLVTLAANGSRGAFLTVAIDDIERQK-FYSELGLTDLGLSE 880 (891)
T ss_pred HHHHHHHHHhcCCcceeEEechhHHHHHH-HHHHhchHHHhHhh
Confidence 99999999999999999999999999777 89999998776643
No 99
>cd04264 DUF619-NAGS DUF619 domain of various N-acetylglutamate Synthases of the fungal arginine-biosynthetic pathway and urea cycle found in humans and fish. DUF619-NAGS: This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present in C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain function has yet to be characterized.
Probab=88.69 E-value=2.4 Score=35.00 Aligned_cols=44 Identities=20% Similarity=0.234 Sum_probs=35.9
Q ss_pred CeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChH
Q 014721 118 KLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYA 166 (419)
Q Consensus 118 ~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~ 166 (419)
.+.|+..++|.|+.||+|+|..|++.+.+.. ..++-.+..+|..
T Consensus 33 ~~~yLdKfaV~~~~~g~gvad~vf~~i~~d~-----~~L~Wrsr~~n~~ 76 (99)
T cd04264 33 GVPYLDKFAVSSSAQGEGTSDALWRRLRRDF-----PKLFWRSRKTNPI 76 (99)
T ss_pred CceEEEEEEEchhhhhcChHHHHHHHHHhhC-----CceEEEeCCCCcc
Confidence 6789999999999999999999999988764 4455566666654
No 100
>KOG2535 consensus RNA polymerase II elongator complex, subunit ELP3/histone acetyltransferase [Chromatin structure and dynamics; Transcription]
Probab=87.01 E-value=0.96 Score=45.24 Aligned_cols=49 Identities=20% Similarity=0.263 Sum_probs=38.0
Q ss_pred chhcCCHHHHHHHHHHHHHHHc-CCcEEEEEEccCChHHHHHHHHhCCCEEeee
Q 014721 130 SHRRMGIGLKLVKRMEEWFRES-GVEYSYIATENDNYASVKLFTDKCGYSKFRT 182 (419)
Q Consensus 130 ~yRgkGIG~~Ll~~~~~~a~~~-G~~~i~l~t~~~N~~s~~lFY~K~GF~~~~~ 182 (419)
.||.||+|+.|+++++..+++. |-..+.+..... ..+ +|+|+||+..+-
T Consensus 498 KfQHQG~GtLLmeEAERIAr~EHgS~KiavISGVG---tR~-YY~klGY~LdGP 547 (554)
T KOG2535|consen 498 KFQHQGFGTLLMEEAERIAREEHGSGKIAVISGVG---TRN-YYRKLGYELDGP 547 (554)
T ss_pred hhhhcchhhHHHHHHHHHHHHhcCCCceEEEeccc---hHH-HHHhhCeeecCh
Confidence 5999999999999999999854 777775554444 233 799999997654
No 101
>PRK10975 TDP-fucosamine acetyltransferase; Provisional
Probab=86.82 E-value=7.8 Score=35.26 Aligned_cols=61 Identities=10% Similarity=0.010 Sum_probs=42.4
Q ss_pred CCcEEEEEEccCChHHHHHHHHhCCCEEeeeceeeecccccccccCCcceeeeecChhhHHHHHHH
Q 014721 152 GVEYSYIATENDNYASVKLFTDKCGYSKFRTPSILVNPVFAHRLIVPKQVTIIQLNPSDAEAFYRR 217 (419)
Q Consensus 152 G~~~i~l~t~~~N~~s~~lFY~K~GF~~~~~~~~~~~pv~~~~~~~~~~v~i~~l~~~~a~~ly~~ 217 (419)
|++.+.+-+...+..-..+ .+..||+...+...|..|+... +.| ..+....++|+..+.+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~-l~~~g~~~~~~~~~~~~~~~~~--~~~--~~iR~a~~~D~~~i~~l 63 (194)
T PRK10975 3 AFSLVQAKVAASDTALLDA-LQQLGFQLVEGEVDFALPVGNA--SDT--TGARVATETDIPALRQL 63 (194)
T ss_pred ccceEEEEechhhhHHHHH-HHhcCCEeeeeEEEEEeecccc--CCC--CCcccCCcccHHHHHHH
Confidence 5667777778888887776 7999999999988888776432 223 34456677776555443
No 102
>COG2401 ABC-type ATPase fused to a predicted acetyltransferase domain [General function prediction only]
Probab=85.77 E-value=0.39 Score=49.45 Aligned_cols=67 Identities=24% Similarity=0.247 Sum_probs=48.5
Q ss_pred CCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEE----ccCChHHHHHHHHhCCCEEeee
Q 014721 116 YTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIAT----ENDNYASVKLFTDKCGYSKFRT 182 (419)
Q Consensus 116 ~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t----~~~N~~s~~lFY~K~GF~~~~~ 182 (419)
....+.|..+.|||+||+-|+|..-+..+.+|..++-.......- .....+-...|+++.||.....
T Consensus 238 ntaaariarvvvhpdyr~dglg~~sv~~a~ewI~eRriPEmr~rkHlvetiaqmarynpffe~~gfkylwd 308 (593)
T COG2401 238 NTAAARIARVVVHPDYRADGLGQLSVIAALEWIIERRIPEMRPRKHLVETIAQMARYNPFFEKVGFKYLWD 308 (593)
T ss_pred hhhhhheeEEEeccccccCccchhHHHHHHHHHHHhhChhhhhhhhHHHHHHHHHhcCchhhhhceeeeee
Confidence 346778999999999999999999999999999988655443220 1111122334789999987654
No 103
>COG3916 LasI N-acyl-L-homoserine lactone synthetase [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=85.13 E-value=14 Score=34.62 Aligned_cols=104 Identities=18% Similarity=0.174 Sum_probs=65.2
Q ss_pred cEEEEE-EECCeEEEEEEeEeeecccCcccccccccccCCCCCCCCCCCCCCeEEEEEEEECc--chhcCC----HHHHH
Q 014721 68 FLMLVA-EVGDEIVGMIRGCIKTVTCGKRISRNTKYTTNDIEPPKPLPVYTKLAYILGLRVSP--SHRRMG----IGLKL 140 (419)
Q Consensus 68 ~~~lVA-e~dgeiVG~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P--~yRgkG----IG~~L 140 (419)
..++++ ..+|+|+|+++......+. .+.+.|.....+ .+.+....+.+...++|++ .-|..| ++..|
T Consensus 52 t~Yll~~~~~g~I~G~~RlLptt~P~----mL~~vF~~Ll~~--~~~P~~p~vwEsSRF~vd~~~a~~~~g~~~~a~~el 125 (209)
T COG3916 52 TVYLLALTSDGRIVGCVRLLPTTGPY----MLTDVFPALLEG--GPPPSSPGVWESSRFAVDKPSARRAAGGVSPAAYEL 125 (209)
T ss_pred ceEEEEEcCCCcEEEEEEeccCCCcc----hhhhhhHHHhcC--CCCCCCCCeEEEeeeeeccccchhhcCCccHHHHHH
Confidence 335555 6789999999888775432 111111100000 0112222566777888886 333332 47889
Q ss_pred HHHHHHHHHHcCCcEEEEEEccCChHHHHHHHHhCCCEEee
Q 014721 141 VKRMEEWFRESGVEYSYIATENDNYASVKLFTDKCGYSKFR 181 (419)
Q Consensus 141 l~~~~~~a~~~G~~~i~l~t~~~N~~s~~lFY~K~GF~~~~ 181 (419)
+.-+.+++.++|++.+...|...=+ +. .++.|+...+
T Consensus 126 ~~g~ie~a~~~G~~~IvtVt~~~me---ri-l~r~Gw~~~r 162 (209)
T COG3916 126 FAGMIEYALARGITGIVTVTDTGME---RI-LRRAGWPLTR 162 (209)
T ss_pred HHHHHHHHHHcCCceEEEEEchHHH---HH-HHHcCCCeEE
Confidence 9999999999999999887766533 34 6899997544
No 104
>KOG4601 consensus Uncharacterized conserved protein [Function unknown]
Probab=85.01 E-value=3 Score=39.49 Aligned_cols=53 Identities=28% Similarity=0.291 Sum_probs=39.1
Q ss_pred CeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChHHHHHHHHh
Q 014721 118 KLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYASVKLFTDK 174 (419)
Q Consensus 118 ~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~lFY~K 174 (419)
+..+|..+.|+++-||.|.|.+|++++++.- +.+.-.++.......-++ |.+|
T Consensus 107 e~lcILDFyVheS~QR~G~G~~lfdyMl~kE---~vephQ~a~DrPS~kLl~-Fm~k 159 (264)
T KOG4601|consen 107 EALCILDFYVHESEQRSGNGFKLFDYMLKKE---NVEPHQCAFDRPSAKLLQ-FMEK 159 (264)
T ss_pred CCceEEEEEeehhhhhcCchHHHHHHHHHhc---CCCchheeccChHHHHHH-HHHH
Confidence 6779999999999999999999999998743 555554555555444444 5544
No 105
>PF09390 DUF1999: Protein of unknown function (DUF1999); InterPro: IPR018987 This family contains a putative Fe-S binding reductase (Q72J89 from SWISSPROT) whose structure adopts an alpha and beta fold. ; PDB: 2D4O_A 2D4P_A.
Probab=83.84 E-value=14 Score=32.63 Aligned_cols=133 Identities=14% Similarity=0.127 Sum_probs=62.8
Q ss_pred EEEEECCCcCcHHHHHHHHHHHccCC-CCCcchhhh----hccChhhhhhc-CCCcEEEEEE-ECCeEEEEEEeEeeecc
Q 014721 19 IVVREFDPNKDCLGVEDVERRCEVGP-SGKLCLFTD----LLGDPICRVRH-SPAFLMLVAE-VGDEIVGMIRGCIKTVT 91 (419)
Q Consensus 19 l~IR~~~~~~Dl~~I~eL~~~~e~~~-~g~~~l~~~----~~~d~i~ri~~-~p~~~~lVAe-~dgeiVG~i~~~~~~~~ 91 (419)
|..|+++ +.|++++..+....+... ++...+... ........++. ...+..|||+ .+|++.||+.+-.-.+
T Consensus 1 M~yR~f~-e~D~~aL~ald~a~qr~~dP~fd~lperer~gr~~tSl~Alrfy~RsgHSFvA~~e~~~~~GfvLAQaVWQ- 78 (161)
T PF09390_consen 1 MRYRPFT-EPDFAALQALDLAAQRRTDPAFDGLPEREREGRLSTSLAALRFYERSGHSFVAEDEGGELQGFVLAQAVWQ- 78 (161)
T ss_dssp -EEE----GGGHHHHHHC--------------------STTS---HHHHHHHHCCS--EEEE-ETTEEEEEEEEEEEE--
T ss_pred CcccccC-cccHHHHHHHhhhccccccccccccccccccccccCCHHHhhhhhccCCcEEEEccCCceeeeeehhHHhc-
Confidence 3589999 999999999866653221 111111000 00000111111 1224578888 7899999997654432
Q ss_pred cCcccccccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChHHHHHH
Q 014721 92 CGKRISRNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYASVKLF 171 (419)
Q Consensus 92 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~lF 171 (419)
|- .....+..|.++|.- ......-|++.+.+-+-..|+-.+.+.....-.. .
T Consensus 79 -Gd----------------------rptVlV~ri~~~~~~-~~~~~~GLLrAvvKSAYDa~VYEv~l~l~p~l~~---A- 130 (161)
T PF09390_consen 79 -GD----------------------RPTVLVRRILLAPGE-PEEVYEGLLRAVVKSAYDAGVYEVHLHLDPELEA---A- 130 (161)
T ss_dssp -SS----------------------SEEEEEEEE---EES-SHHHHHHHHHHHHHHHHHTT-SEEEE---THHHH---H-
T ss_pred -CC----------------------CceEEEEEeecCCCC-cHHHHHHHHHHHHHhhhccceEEEEeeCCHHHHH---H-
Confidence 22 145666777666653 3467777899999999889998888887773222 2
Q ss_pred HHhCCCEEee
Q 014721 172 TDKCGYSKFR 181 (419)
Q Consensus 172 Y~K~GF~~~~ 181 (419)
.+.-||...+
T Consensus 131 ~~a~~~~~~~ 140 (161)
T PF09390_consen 131 ARAEGFRLGG 140 (161)
T ss_dssp HHHTT----S
T ss_pred HhhcccccCC
Confidence 4666777544
No 106
>PLN03238 probable histone acetyltransferase MYST; Provisional
Probab=82.85 E-value=3.5 Score=40.43 Aligned_cols=32 Identities=22% Similarity=0.259 Sum_probs=27.6
Q ss_pred EEEEEECcchhcCCHHHHHHHHHHHHHHHcCC
Q 014721 122 ILGLRVSPSHRRMGIGLKLVKRMEEWFRESGV 153 (419)
Q Consensus 122 I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~ 153 (419)
+..+.|.|-||++|+|+-|++-.-+..+..|.
T Consensus 158 LaCIltLPpyQrkGyG~~LI~fSYeLSr~Eg~ 189 (290)
T PLN03238 158 LACILTLPPYQRKGYGKFLISFAYELSKREGK 189 (290)
T ss_pred EEEEEecChhhhccHhHhHHHHHhHHhhccCC
Confidence 45578999999999999999999998877763
No 107
>cd04265 DUF619-NAGS-U DUF619 domain of various N-acetylglutamate Synthases (NAGS) of the urea (U) cycle of humans and fish. This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present in C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain function has yet to be characterized.
Probab=82.23 E-value=6.8 Score=32.37 Aligned_cols=44 Identities=23% Similarity=0.290 Sum_probs=35.5
Q ss_pred CeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChH
Q 014721 118 KLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYA 166 (419)
Q Consensus 118 ~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~ 166 (419)
.+.|+..++|.|+.||+|+|..|++.+.+.. ..++-.+..+|..
T Consensus 33 ~~~yLdKfaV~~~~~g~gv~d~vf~~i~~d~-----~~L~Wrsr~~n~~ 76 (99)
T cd04265 33 GVPYLDKFAVSSSAQGEGTGEALWRRLRRDF-----PKLFWRSRSTNPI 76 (99)
T ss_pred CceEEEEEEEchhhhhcChHHHHHHHHHhhC-----CceEEEeCCCCcc
Confidence 5789999999999999999999999998765 2355566666654
No 108
>PF01853 MOZ_SAS: MOZ/SAS family; InterPro: IPR002717 Moz is a monocytic leukemia Zn_finger protein and the SAS protein from Saccharomyces cerevisiae (Baker's yeast) is involved in silencing the Hmr locus. These proteins were reported to be homologous to acetyltransferases [] but this similarity is not supported by standard sequence analysis.; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 3TO6_A 1MJA_A 1MJ9_A 3TO7_A 3TO9_A 1MJB_A 1FY7_A 2OZU_A 2RC4_A 2OU2_A ....
Probab=82.17 E-value=6.4 Score=36.35 Aligned_cols=33 Identities=24% Similarity=0.244 Sum_probs=27.6
Q ss_pred EEEEEEECcchhcCCHHHHHHHHHHHHHHHcCC
Q 014721 121 YILGLRVSPSHRRMGIGLKLVKRMEEWFRESGV 153 (419)
Q Consensus 121 ~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~ 153 (419)
-+..+.|-|.||++|+|+.|++-.-+.++..|.
T Consensus 82 NLsCIl~lP~yQrkGyG~~LI~fSY~LSr~e~~ 114 (188)
T PF01853_consen 82 NLSCILTLPPYQRKGYGRFLIDFSYELSRREGK 114 (188)
T ss_dssp EESEEEE-GGGTTSSHHHHHHHHHHHHHHHTTS
T ss_pred eEeehhhcchhhhcchhhhhhhhHHHHhhccCc
Confidence 455688999999999999999999998887764
No 109
>PF04768 DUF619: Protein of unknown function (DUF619); InterPro: IPR006855 This region of unknown function is found at the C terminus of Neurospora crassa acetylglutamate synthase (2.7.2.8 from EC). It is also found C-terminal to the amino acid kinase region in some fungal acetylglutamate kinase enzymes (IPR001048 from INTERPRO). These enzymes play a role in arginine biosynthesis.; PDB: 3S6K_A 4AB7_F 3ZZF_B 3ZZI_D 3ZZH_A 3ZZG_A 3S6G_Y 3S6H_A 3S7Y_A.
Probab=81.02 E-value=16 Score=33.25 Aligned_cols=110 Identities=16% Similarity=0.158 Sum_probs=62.9
Q ss_pred cHHHHHHHHHHHccCCCCCcchhhhhccChhhhhhcCCCcEEEEEEECCeEEEEEEeEeeecccCcccccccccccCCCC
Q 014721 29 DCLGVEDVERRCEVGPSGKLCLFTDLLGDPICRVRHSPAFLMLVAEVGDEIVGMIRGCIKTVTCGKRISRNTKYTTNDIE 108 (419)
Q Consensus 29 Dl~~I~eL~~~~e~~~~g~~~l~~~~~~d~i~ri~~~p~~~~lVAe~dgeiVG~i~~~~~~~~~g~~~~~~~~~~~~~~~ 108 (419)
|.+.+.++....+........+ +.++...+ ...++. +..-|.+.+.....
T Consensus 33 d~~kL~~ll~~sf~~~~~v~~y--------l~~l~~~~-~~iy~d---~~y~~~AIVt~e~~------------------ 82 (170)
T PF04768_consen 33 DLDKLRALLERSFGGKLDVDHY--------LDRLNNRL-FKIYVD---EDYEGAAIVTPEGP------------------ 82 (170)
T ss_dssp -HHHHHHHHHHHSTSSSBHTTH--------HHHHHTS--SEEEEE---TTSSEEEEEEEE-S------------------
T ss_pred CHHHHHHHHHhcccccccHHHH--------HHHhhccc-eEEEEe---CCceEEEEEEecCC------------------
Confidence 8999999998888333222222 34443333 334443 33334443333211
Q ss_pred CCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChHHHHHHHHhC-CCEE
Q 014721 109 PPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYASVKLFTDKC-GYSK 179 (419)
Q Consensus 109 ~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~lFY~K~-GF~~ 179 (419)
.....++|+.-++|.|..+|.|++..+++.+.+.. ..++-.+..+|.. .+-|++|+ |+-.
T Consensus 83 -----~~~~~v~yLdKFav~~~~~g~gv~D~vf~~i~~d~-----p~L~Wrsr~~n~~-~~Wyf~rs~G~~~ 143 (170)
T PF04768_consen 83 -----DSNGPVPYLDKFAVSKSAQGSGVADNVFNAIRKDF-----PKLFWRSREDNPN-NKWYFERSDGSFK 143 (170)
T ss_dssp -----CTCTSEEEEEEEEE-HHHHHTTHHHHHHHHHHHH------SSEEEEEETT-TT-HHHHHHH-SEEEE
T ss_pred -----CCCCCCeEEEEEEecchhhhcCHHHHHHHHHHHhc-----cceEEEecCCCCc-ccEEEEeeEEEEE
Confidence 11226899999999999999999999999997755 2255666666654 44444543 5543
No 110
>KOG2779 consensus N-myristoyl transferase [Lipid transport and metabolism]
Probab=80.29 E-value=11 Score=37.96 Aligned_cols=59 Identities=17% Similarity=0.179 Sum_probs=46.7
Q ss_pred ECCeEEEEEEeEeeecccCcccccccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCC
Q 014721 75 VGDEIVGMIRGCIKTVTCGKRISRNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGV 153 (419)
Q Consensus 75 ~dgeiVG~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~ 153 (419)
..+++||||++.+..... .+...+++.|..|+||...|+++++--|++++-.++.-.|+
T Consensus 143 ~s~kLVaFIsaiP~~irv--------------------rdk~vk~veINFLCVHKkLRSKRlaPvLIrEITRRvnl~gI 201 (421)
T KOG2779|consen 143 SSKKLVAFISAIPATIRV--------------------RDKVVKMVEINFLCVHKKLRSKRLAPVLIREITRRVNLEGI 201 (421)
T ss_pred cCCceEEEEeccccEEEE--------------------ccceeeeeeEEEEEEehhhhccccccHHHHHHHHHhhhhhh
Confidence 357999999887765421 12244799999999999999999999999999888765554
No 111
>KOG3014 consensus Protein involved in establishing cohesion between sister chromatids during DNA replication [Replication, recombination and repair]
Probab=77.53 E-value=14 Score=35.42 Aligned_cols=33 Identities=27% Similarity=0.233 Sum_probs=28.8
Q ss_pred CCeEEEEEEEECcchhcCCHHHHHHHHHHHHHH
Q 014721 117 TKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFR 149 (419)
Q Consensus 117 ~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~ 149 (419)
...+.|..+.|.+.-|++||++.|++.+.....
T Consensus 181 ~~~~GIsRIWV~s~~Rr~gIAs~lldva~~~~~ 213 (257)
T KOG3014|consen 181 PAICGISRIWVSSLRRRKGIASLLLDVARCNFV 213 (257)
T ss_pred CcEeeeEEEEeehhhhhhhhHHHHHHHHHHhhh
Confidence 357889999999999999999999998877654
No 112
>PTZ00064 histone acetyltransferase; Provisional
Probab=77.30 E-value=5.8 Score=41.73 Aligned_cols=32 Identities=22% Similarity=0.211 Sum_probs=27.6
Q ss_pred EEEEEECcchhcCCHHHHHHHHHHHHHHHcCC
Q 014721 122 ILGLRVSPSHRRMGIGLKLVKRMEEWFRESGV 153 (419)
Q Consensus 122 I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~ 153 (419)
+..|.|.|-||++|+|+-|++-.-+..+..|.
T Consensus 387 LACILtLPpyQRKGYGklLIdfSYeLSrrEgk 418 (552)
T PTZ00064 387 LACILTLPCYQRKGYGKLLVDLSYKLSLKEGK 418 (552)
T ss_pred eEEEEecchhhhcchhhhhhhhhhhhhhhcCC
Confidence 45578999999999999999999998877663
No 113
>PF02799 NMT_C: Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain; InterPro: IPR022677 Myristoyl-CoA:protein N-myristoyltransferase (2.3.1.97 from EC) (Nmt) [] is the enzyme responsible for transferring a myristate group on the N-terminal glycine of a number of cellular eukaryotics and viral proteins. Nmt is a monomeric protein of about 50 to 60kDa whose sequence appears to be well conserved. The N and C-terminal domains of NMT are structurally similar, each adopting an acyl-CoA N-acyltransferase-like fold. This entry represents the C-terminal region.; GO: 0004379 glycylpeptide N-tetradecanoyltransferase activity; PDB: 2P6G_B 2P6F_F 2P6E_A 1IIC_A 1IID_A 2NMT_A 2WUU_A 1IYL_B 1NMT_B 1IYK_A ....
Probab=77.29 E-value=54 Score=30.40 Aligned_cols=131 Identities=14% Similarity=0.022 Sum_probs=77.2
Q ss_pred EEECCCcCcHHHHHHHHHHHccCCCCCcchhhhhccChhhhhhcCC--CcEEEEEEEC-CeEEEEEEeEeeecccCcccc
Q 014721 21 VREFDPNKDCLGVEDVERRCEVGPSGKLCLFTDLLGDPICRVRHSP--AFLMLVAEVG-DEIVGMIRGCIKTVTCGKRIS 97 (419)
Q Consensus 21 IR~~~~~~Dl~~I~eL~~~~e~~~~g~~~l~~~~~~d~i~ri~~~p--~~~~lVAe~d-geiVG~i~~~~~~~~~g~~~~ 97 (419)
+|+++ ++|++++.+|.+.--..- .+......+.+..+.... --..+|.+++ |+|-.+++...-....-..
T Consensus 31 lR~m~-~~Dv~~v~~Ll~~yl~~f----~l~~~fs~eev~Hw~lp~~~Vv~syVve~~~~~ITDf~SFY~Lpstvi~~-- 103 (190)
T PF02799_consen 31 LRPME-EKDVPQVTKLLNKYLKKF----DLAPVFSEEEVKHWFLPRKNVVYSYVVEDPDGKITDFFSFYSLPSTVIGN-- 103 (190)
T ss_dssp EEE---GGGHHHHHHHHHHHHTTS----SEEEE--HHHHHHHHS-BTTTEEEEEEEETTSEEEEEEEEEEEEEEESSS--
T ss_pred cccCc-hhhHHHHHHHHHHHHHhc----ccccccCHHHHHhhcccCCCeEEEEEEecCCCceeeEEEEeecceeecCC--
Confidence 89999 999999999987763221 111111111122322111 1335677765 5888888665554321000
Q ss_pred cccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChHHHHHHHHhCCC
Q 014721 98 RNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYASVKLFTDKCGY 177 (419)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~lFY~K~GF 177 (419)
+.-...+.||+.--+..- ==-+.|++.++-.|++.|++..-....-+|.. |.+.+.|
T Consensus 104 --------------~k~~~l~aAY~fY~~~~~-----~~l~~Lm~DaLi~Ak~~gfDVFNaLd~mdN~~----fL~~lKF 160 (190)
T PF02799_consen 104 --------------PKHKTLKAAYSFYYVATS-----TRLKELMNDALILAKNEGFDVFNALDLMDNSS----FLEDLKF 160 (190)
T ss_dssp --------------SSSSEEEEEEEEEEEESS-----SHHHHHHHHHHHHHHHTTESEEEEESTTTGGG----TTTTTT-
T ss_pred --------------CCccceeeeeeeeeeecC-----CCHHHHHHHHHHHHHHcCCCEEehhhhccchh----hHhhCCc
Confidence 001234677765543322 22467899999999999999998888889887 8999999
Q ss_pred EEee
Q 014721 178 SKFR 181 (419)
Q Consensus 178 ~~~~ 181 (419)
.+-.
T Consensus 161 g~Gd 164 (190)
T PF02799_consen 161 GPGD 164 (190)
T ss_dssp EEEE
T ss_pred cCCC
Confidence 8653
No 114
>PLN03239 histone acetyltransferase; Provisional
Probab=76.51 E-value=6.8 Score=39.51 Aligned_cols=32 Identities=22% Similarity=0.262 Sum_probs=27.7
Q ss_pred EEEEEECcchhcCCHHHHHHHHHHHHHHHcCC
Q 014721 122 ILGLRVSPSHRRMGIGLKLVKRMEEWFRESGV 153 (419)
Q Consensus 122 I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~ 153 (419)
+..|.|.|-||++|+|+-|++-.-+..+..|.
T Consensus 216 LaCIltLPpyQrkGyG~lLI~fSYeLSr~Eg~ 247 (351)
T PLN03239 216 LACILTFPAHQRKGYGRFLIAFSYELSKKEEK 247 (351)
T ss_pred eEEEEecChhhhcchhhhhHhhhhHhhhhcCC
Confidence 45578999999999999999999988887764
No 115
>PF04377 ATE_C: Arginine-tRNA-protein transferase, C terminus; InterPro: IPR007472 Arginine-tRNA-protein transferase catalyses the post-translational conjugation of arginine to the N terminus of a protein. In eukaryotes, this functions as part of the N terminus rule pathway of protein degradation by conjugating a destabilising amino acid to the N-terminal aspartate or glutamate of a protein, targeting the protein for ubiquitin-dependent proteolysis. N-terminal cysteine is sometimes modified []. In Saccharomyces cerevisiae, Cys20, 23, 94 and/or 95 are thought to be important for activity []. Of these, only Cys 94 appears to be completely conserved in this family. This entry represents the C-terminal region of the enzyme arginine-tRNA-protein transferase, found in both eukaryotic and prokaryotic enzymes.; GO: 0004057 arginyltransferase activity, 0016598 protein arginylation
Probab=73.28 E-value=24 Score=30.58 Aligned_cols=41 Identities=22% Similarity=0.258 Sum_probs=35.5
Q ss_pred EECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChH
Q 014721 126 RVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYA 166 (419)
Q Consensus 126 ~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~ 166 (419)
.-+|++..+.+|+-.+-.-+++|++.|.++++|.--..+-+
T Consensus 69 fyDPd~~~~SlG~~~iL~eI~~a~~~~l~y~YLGY~I~~c~ 109 (128)
T PF04377_consen 69 FYDPDYSKRSLGTYSILREIELARELGLPYYYLGYWIHGCP 109 (128)
T ss_pred eeCCCccccCcHHHHHHHHHHHHHHcCCCEEeeCeEeCCCC
Confidence 35999999999999999999999999999999985555433
No 116
>PLN00104 MYST -like histone acetyltransferase; Provisional
Probab=72.80 E-value=5.7 Score=41.45 Aligned_cols=32 Identities=22% Similarity=0.246 Sum_probs=27.1
Q ss_pred EEEEEECcchhcCCHHHHHHHHHHHHHHHcCC
Q 014721 122 ILGLRVSPSHRRMGIGLKLVKRMEEWFRESGV 153 (419)
Q Consensus 122 I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~ 153 (419)
+..|.|.|-||++|+|+.|++-.-+..+..|.
T Consensus 309 LaCIltlP~yQrkGyG~~LI~~SYeLSr~eg~ 340 (450)
T PLN00104 309 LACILTLPPYQRKGYGKFLIAFSYELSKREGK 340 (450)
T ss_pred eEEEEecchhhhcchhheehhheehhhhccCC
Confidence 45577999999999999999999888877653
No 117
>PRK01305 arginyl-tRNA-protein transferase; Provisional
Probab=68.07 E-value=47 Score=31.94 Aligned_cols=54 Identities=17% Similarity=0.162 Sum_probs=42.2
Q ss_pred EEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChHHHHHHHHhCCCEEeeecee
Q 014721 125 LRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYASVKLFTDKCGYSKFRTPSI 185 (419)
Q Consensus 125 L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~lFY~K~GF~~~~~~~~ 185 (419)
..-+|++..+++|+-.+-.-++++++.|.+++||.--..+- .|+.|+...++..
T Consensus 173 ~FyDPd~~~~SLG~~~iL~qI~~ak~~gl~y~YLGY~I~~c-------~kM~YK~~f~P~E 226 (240)
T PRK01305 173 TFYDPDEEHRSLGTFAILWQIELAKRLGLPYVYLGYWIKGS-------RKMNYKARFRPLE 226 (240)
T ss_pred EeeCCCccccCCHHHHHHHHHHHHHHcCCCeEeeeEEECCC-------CcccccccCCcce
Confidence 34699999999999999999999999999999998666543 4555655544433
No 118
>PF09924 DUF2156: Uncharacterized conserved protein (DUF2156); InterPro: IPR024320 This domain of unknown function is found in uncharacterised proteins and in Lysylphosphatidylglycerol synthetase, which catalyses the transfer of a lysyl group from L-lysyl-tRNA(Lys) to membrane-bound phosphatidylglycerol [].; PDB: 2HQY_A.
Probab=65.57 E-value=66 Score=31.43 Aligned_cols=108 Identities=17% Similarity=0.078 Sum_probs=58.4
Q ss_pred EEEEEC---CCcCcHHHHHHHHHHHccCCC-CCcchhhhhccChhhhhhcCCCcEEEEEEE-CCeEEEEEEeEeeecccC
Q 014721 19 IVVREF---DPNKDCLGVEDVERRCEVGPS-GKLCLFTDLLGDPICRVRHSPAFLMLVAEV-GDEIVGMIRGCIKTVTCG 93 (419)
Q Consensus 19 l~IR~~---~~~~Dl~~I~eL~~~~e~~~~-g~~~l~~~~~~d~i~ri~~~p~~~~lVAe~-dgeiVG~i~~~~~~~~~g 93 (419)
+.+++. + +++.+++.++...-..... ....+.... +...... ....+++.. +|+++|++.+.....
T Consensus 133 ~~~~~~~~~~-~~~~~el~~i~~~W~~~~~~~e~~~~~~~----~~~~~~~-~~~~~~~~~~dgki~af~~~~~~~~--- 203 (299)
T PF09924_consen 133 FEVVPIPELD-PELRDELLEISDEWLKEKERPERGFIMGA----LEHFDEL-GLRGFVARVADGKIVAFAIGSPLGG--- 203 (299)
T ss_dssp -EEEE------GGGHHHHHHHHHHHHHHCTHHHHHHHHHH----HHTHHHH-T-EEEEEEE-TTEEEEEEEEEEEE----
T ss_pred EEEEECCCCC-HHHHHHHHHHHHHHHhcCchhHHHHHhcc----ccchhhc-CceEEEEEECCCcEEEEEEEEEccC---
Confidence 566676 6 7888888887655422221 111111111 1222112 244677777 999999998776541
Q ss_pred cccccccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEE
Q 014721 94 KRISRNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIA 159 (419)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~ 159 (419)
.....+.-..-+|+ -=+|+-..|+..+.+++++.|++++-|.
T Consensus 204 -----------------------~~~~~~~~~k~~~~-a~~G~~e~l~~~~~~~~~~~g~~~lnLg 245 (299)
T PF09924_consen 204 -----------------------RDGWSIDFEKADPD-APKGIYEFLNVEFAEHLKAEGVEYLNLG 245 (299)
T ss_dssp -----------------------TTEEEEEEEEE-TT--STTHHHHHHHHHHHHS--TT--EEE--
T ss_pred -----------------------CccEEEEEEecCCC-CCCcHHHHHHHHHHHhhhhCCceEEEcc
Confidence 12233344445566 4579999999999999998898777543
No 119
>PF13880 Acetyltransf_13: ESCO1/2 acetyl-transferase
Probab=64.54 E-value=3.9 Score=31.63 Aligned_cols=24 Identities=21% Similarity=0.300 Sum_probs=22.0
Q ss_pred ceEEEEecCchhhHHHHHHhhhhhhcc
Q 014721 279 DVFKLEVRGASRVKRTLAKTTRIVDRV 305 (419)
Q Consensus 279 ~~~~l~~~~~~~~~~~~~~~~~~~~~~ 305 (419)
+|.+++|.... |..++|++|||.+
T Consensus 7 GI~RIWV~~~~---RR~GIAt~Lld~a 30 (70)
T PF13880_consen 7 GISRIWVSPSH---RRKGIATRLLDAA 30 (70)
T ss_pred EeEEEEeChhh---hhhhHHHHHHHHH
Confidence 78899998777 9999999999999
No 120
>PHA01733 hypothetical protein
Probab=61.21 E-value=29 Score=30.93 Aligned_cols=46 Identities=15% Similarity=0.321 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHH-cCCcEEEEEEccCChHHHHHHHHhCCCEEeee
Q 014721 136 IGLKLVKRMEEWFRE-SGVEYSYIATENDNYASVKLFTDKCGYSKFRT 182 (419)
Q Consensus 136 IG~~Ll~~~~~~a~~-~G~~~i~l~t~~~N~~s~~lFY~K~GF~~~~~ 182 (419)
+-+.+++++..+..+ +.+..++=.|...|..+++ |.+.+||+-...
T Consensus 86 ~~~~f~re~r~~l~e~~~Yp~LwNyV~~~N~~hir-~Lk~lGF~f~~~ 132 (153)
T PHA01733 86 NPIALLRGAKWWLPKSRNYDLLWNIVDKRNLVHRK-LLRKLGFKGLRY 132 (153)
T ss_pred CCHHHHHHHHHHHHHhccccHHHHhHhcccHHHHH-HHHHcCceeecc
Confidence 444555565555553 3455555568999999999 699999996554
No 121
>PF04339 DUF482: Protein of unknown function, DUF482; InterPro: IPR007434 This family contains several proteins of uncharacterised function.
Probab=60.76 E-value=1.1e+02 Score=31.34 Aligned_cols=127 Identities=14% Similarity=0.104 Sum_probs=70.6
Q ss_pred cEEEEECCC----cCcHHHHHHHHHHHccCCCCCcchhhhhccChhhhh-hcCCCcE-EEEEEECCeEEEEEEeEeeecc
Q 014721 18 NIVVREFDP----NKDCLGVEDVERRCEVGPSGKLCLFTDLLGDPICRV-RHSPAFL-MLVAEVGDEIVGMIRGCIKTVT 91 (419)
Q Consensus 18 ~l~IR~~~~----~~Dl~~I~eL~~~~e~~~~g~~~l~~~~~~d~i~ri-~~~p~~~-~lVAe~dgeiVG~i~~~~~~~~ 91 (419)
.++|+..+. +++++.+..+........++...+..+. +..+ ...+... +++|..+|++||+.........
T Consensus 199 Gi~~~~l~G~~i~~~~~~~f~~~Y~~Ty~k~~~~~yLt~~F----F~~l~~~m~~~~~l~~A~~~g~~Va~aL~l~~~~~ 274 (370)
T PF04339_consen 199 GIRIRTLTGDEITDEDWDRFYRLYQNTYAKRWGRPYLTREF----FEQLAETMPEQVVLVVARRDGQPVAFALCLRGDDT 274 (370)
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHHHHHHhhCCChhhcHHH----HHHHHHhCcCCEEEEEEEECCeEEEEEEEEEeCCE
Confidence 455665541 4566777777777754445433332222 3333 2234443 5677889999999877765421
Q ss_pred cCcccccccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChHHHHHH
Q 014721 92 CGKRISRNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYASVKLF 171 (419)
Q Consensus 92 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~lF 171 (419)
.|++. .....++.+.-. ....-+.+++|.++|.+.+...+. . ..|+
T Consensus 275 -----------------------LyGRY-----wG~~~~~~~LHF-e~cYYq~Ie~aI~~Gl~~f~~Gaq--G--EHK~- 320 (370)
T PF04339_consen 275 -----------------------LYGRY-----WGCDEEIPFLHF-ELCYYQGIEYAIEHGLRRFEPGAQ--G--EHKI- 320 (370)
T ss_pred -----------------------EEEee-----ecccccccCcch-HHHHHHHHHHHHHcCCCEEECCcc--h--hHHH-
Confidence 12211 112333333221 122457899999999988744432 2 2343
Q ss_pred HHhCCCEEeeece
Q 014721 172 TDKCGYSKFRTPS 184 (419)
Q Consensus 172 Y~K~GF~~~~~~~ 184 (419)
..||+++.+.+
T Consensus 321 --~RGf~P~~t~S 331 (370)
T PF04339_consen 321 --ARGFEPVPTYS 331 (370)
T ss_pred --HcCCcccccee
Confidence 67999887744
No 122
>PHA00432 internal virion protein A
Probab=54.51 E-value=39 Score=29.61 Aligned_cols=29 Identities=10% Similarity=0.013 Sum_probs=24.3
Q ss_pred CcEEEEEEccCChHHHHHHHHhCCCEEeee
Q 014721 153 VEYSYIATENDNYASVKLFTDKCGYSKFRT 182 (419)
Q Consensus 153 ~~~i~l~t~~~N~~s~~lFY~K~GF~~~~~ 182 (419)
+..++=.+...|..+++ |.+.+||+-...
T Consensus 93 yp~LwNyV~~~N~~hir-~Lk~lGf~f~~e 121 (137)
T PHA00432 93 YPSLWNYVWVGNKSHIR-FLKSIGAVFHNE 121 (137)
T ss_pred hhhhheeeecCCHHHHH-HHHHcCeeeecc
Confidence 66677779999999999 699999996655
No 123
>KOG2747 consensus Histone acetyltransferase (MYST family) [Chromatin structure and dynamics]
Probab=52.34 E-value=25 Score=36.09 Aligned_cols=32 Identities=25% Similarity=0.289 Sum_probs=26.1
Q ss_pred EEEEEECcchhcCCHHHHHHHHHHHHHHHcCC
Q 014721 122 ILGLRVSPSHRRMGIGLKLVKRMEEWFRESGV 153 (419)
Q Consensus 122 I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~ 153 (419)
+..+-|.|-||++|+|+-|++-.-+..+..|.
T Consensus 263 laCILtLPpyQRkGYGklLIdFSYeLSr~E~~ 294 (396)
T KOG2747|consen 263 LACILTLPPYQRKGYGKLLIDFSYELSRREGK 294 (396)
T ss_pred eeeeeecChhhhcccchhhhhhhhhhhcccCc
Confidence 34477899999999999999998887766543
No 124
>TIGR02382 wecD_rffC TDP-D-fucosamine acetyltransferase. This model represents the WecD protein (Formerly RffC) for the biosynthesis of enterobacterial common antigen (ECA), an outer leaflet, outer membrane glycolipid with a trisaccharide repeat unit. WecD is a member of the GNAT family of acetytransferases (pfam00583).
Probab=50.67 E-value=66 Score=29.04 Aligned_cols=55 Identities=15% Similarity=0.078 Sum_probs=36.8
Q ss_pred cCChHHHHHHHHhCCCEEeeeceeeecccccccccCCcceeeeecChhhHHHHHHHh
Q 014721 162 NDNYASVKLFTDKCGYSKFRTPSILVNPVFAHRLIVPKQVTIIQLNPSDAEAFYRRK 218 (419)
Q Consensus 162 ~~N~~s~~lFY~K~GF~~~~~~~~~~~pv~~~~~~~~~~v~i~~l~~~~a~~ly~~~ 218 (419)
.+|..-..+ .+..||+...+...+..|+..+.. ......+...+++|+..+.+..
T Consensus 7 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~lR~~~~~D~~~l~~l~ 61 (191)
T TIGR02382 7 ASNLGLLDA-LQQLGFSLVEGEVDLSLPVNNTEN-ATSDPGARVATETDIPALRQLA 61 (191)
T ss_pred hHHHHHHHH-HHHhhhhhhheeEEEEEEcCCCCC-CCCCCcceeCChhhHHHHHHHH
Confidence 344443444 689999999998888777665322 3344578888888887665554
No 125
>PF02474 NodA: Nodulation protein A (NodA); InterPro: IPR003484 Rhizobial nodulation (Nod) factors are signalling molecules secreted by root-nodulating rhizobia in response to flavanoids excreted by the host plant. They induce various symbiotic responses on the roots of the leguminous host plant at low concentrations, and are required for successful infection. Rhizobial Nod factors are lipo-chitooligosaccharides carrying various substituents which are important determinants of host specificity []. NodA is an N-acyl transferase which specifies the transfer of an acyl chain to the oligosaccharide backbone of Nod factor. Allelic variation of the nodA gene can contribute to the determination of host range [].; GO: 0016746 transferase activity, transferring acyl groups
Probab=50.35 E-value=23 Score=32.24 Aligned_cols=54 Identities=17% Similarity=0.263 Sum_probs=42.5
Q ss_pred CeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChHHHHHHHHhCC
Q 014721 118 KLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYASVKLFTDKCG 176 (419)
Q Consensus 118 ~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~lFY~K~G 176 (419)
-++++.-.+|.|+.+|.||+..+ ..+.-.+++.|+...+.++.. +++..+++++
T Consensus 84 LVaElGLygVRpDLEGlGi~hs~-r~m~PvLq~LgVPF~FGtVR~----al~~Hv~R~~ 137 (196)
T PF02474_consen 84 LVAELGLYGVRPDLEGLGISHSM-RVMYPVLQELGVPFGFGTVRH----ALRNHVERLC 137 (196)
T ss_pred eEEEEEEEEeeccccccccchhh-hhhhhHHHhcCCCeecccchH----HHHHHHHHHh
Confidence 47888889999999999999976 688888888899877766543 3444577766
No 126
>PHA02769 hypothetical protein; Provisional
Probab=45.55 E-value=18 Score=30.63 Aligned_cols=52 Identities=23% Similarity=0.293 Sum_probs=35.5
Q ss_pred HHHHHHH---HHHHHHHcCCcEEEEEEccCChHHHHHHHHhCCCEEeeeceeeecccc
Q 014721 137 GLKLVKR---MEEWFRESGVEYSYIATENDNYASVKLFTDKCGYSKFRTPSILVNPVF 191 (419)
Q Consensus 137 G~~Ll~~---~~~~a~~~G~~~i~l~t~~~N~~s~~lFY~K~GF~~~~~~~~~~~pv~ 191 (419)
|..|+.. +.+.++..|.+.++..-.++... .+ |.|.||+.++..+.-.+|+.
T Consensus 94 gd~lvnfl~~l~~k~~~dg~evlwtlgfpdhsn--al-y~kagfk~vg~tsrtkh~v~ 148 (154)
T PHA02769 94 GDHLVNFLNDLAEKLKKDGFEVLWTLGFPDHSN--AL-YKKAGFKLVGQTSRTKHEVY 148 (154)
T ss_pred hHHHHHHHHHHHHHHhcCCeEEEEEecCCCcch--hH-HhhhhhhHhcccccccCcEE
Confidence 4445544 45566677998887776666544 45 99999999988766655543
No 127
>COG5092 NMT1 N-myristoyl transferase [Lipid metabolism]
Probab=39.00 E-value=89 Score=31.24 Aligned_cols=112 Identities=13% Similarity=0.043 Sum_probs=68.0
Q ss_pred EEEEECCCcCcHHHHHHHHHHHccCC--CCCcchhhhhccChhhhhhcCCC---cEEEEEEEC--CeEEEEEEeEeeecc
Q 014721 19 IVVREFDPNKDCLGVEDVERRCEVGP--SGKLCLFTDLLGDPICRVRHSPA---FLMLVAEVG--DEIVGMIRGCIKTVT 91 (419)
Q Consensus 19 l~IR~~~~~~Dl~~I~eL~~~~e~~~--~g~~~l~~~~~~d~i~ri~~~p~---~~~lVAe~d--geiVG~i~~~~~~~~ 91 (419)
.+|...+ ...++.+..+........ .|.... .....+.-....|. ...++.... .++||||.+..-...
T Consensus 82 c~idv~N-~~ql~dv~~lL~eNYVED~~ag~rf~---Y~~EFl~Wal~~pg~kK~whigvRvk~t~klVaFIsa~p~~v~ 157 (451)
T COG5092 82 CVIDVAN-KKQLEDVFVLLEENYVEDIYAGHRFR---YSVEFLQWALDGPGGKKRWHIGVRVKGTQKLVAFISAKPHLVS 157 (451)
T ss_pred eeEeccc-cchhHHHHHHHHhhhhhhhhhhhHHH---HHHHHHHHhhcCCCCceeeEEEEEEcccceeEEEEecceeEEE
Confidence 3455555 677777777766653222 221111 11111111222232 223444444 489999988776643
Q ss_pred cCcccccccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCc
Q 014721 92 CGKRISRNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVE 154 (419)
Q Consensus 92 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~ 154 (419)
. .+...+++.|.-|+||.+.|++.+.--|++++-.++.-.|+-
T Consensus 158 v--------------------RgK~~~~~evNFLCihk~lRsKRltPvLIkEiTRR~n~~~iw 200 (451)
T COG5092 158 V--------------------RGKRSSVLEVNFLCIHKELRSKRLTPVLIKEITRRANVDGIW 200 (451)
T ss_pred E--------------------cccccccceEEEEEEehhhhhCccchHHHHHHHHhhhhhhhH
Confidence 2 123446889999999999999999999999998888655543
No 128
>KOG2779 consensus N-myristoyl transferase [Lipid transport and metabolism]
Probab=38.76 E-value=2.6e+02 Score=28.58 Aligned_cols=133 Identities=17% Similarity=0.056 Sum_probs=76.1
Q ss_pred EEECCCcCcHHHHHHHHHHHccCCCCCcchhhhhccChhhhhhcCCC--cEEEEEEE-CCeEEEEEEeEeeecccCcccc
Q 014721 21 VREFDPNKDCLGVEDVERRCEVGPSGKLCLFTDLLGDPICRVRHSPA--FLMLVAEV-GDEIVGMIRGCIKTVTCGKRIS 97 (419)
Q Consensus 21 IR~~~~~~Dl~~I~eL~~~~e~~~~g~~~l~~~~~~d~i~ri~~~p~--~~~lVAe~-dgeiVG~i~~~~~~~~~g~~~~ 97 (419)
+|++. ++|++++.+|.+.--.. . .+...+..+.++....... -..+|++. +|+|-+|...+.-..+.
T Consensus 263 ~R~me-~kDvp~V~~Ll~~yl~q-f---~la~~f~~eev~Hwf~p~e~VV~syVvesp~g~ITDF~SFy~lpsTv----- 332 (421)
T KOG2779|consen 263 LREME-EKDVPAVFRLLRNYLKQ-F---ELAPVFDEEEVEHWFLPRENVVYSYVVESPNGKITDFCSFYSLPSTV----- 332 (421)
T ss_pred ccccc-ccchHHHHHHHHHHHHh-e---ecccccCHHHhHhhcccccceEEEEEEECCCCcccceeeEEeccccc-----
Confidence 79999 99999999998776110 0 1111111111222211111 22456664 78888887655443211
Q ss_pred cccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChHHHHHHHHhCCC
Q 014721 98 RNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYASVKLFTDKCGY 177 (419)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~lFY~K~GF 177 (419)
+-.+.....+.+|+.. .|+-+ -=-..|+..++-.+++.|++......--+|.. |.++++|
T Consensus 333 -----------~~~~~~ktl~aaYlyY-~v~~~----t~~~~lvnDalilak~~gfDVFNAld~meN~~----fl~~LkF 392 (421)
T KOG2779|consen 333 -----------MGNPKYKTLQAAYLYY-NVATS----TPLLQLVNDALILAKQKGFDVFNALDLMENES----FLKDLKF 392 (421)
T ss_pred -----------cCCCCcceeeeeeEEE-eccCC----ccHHHHHHHHHHHHHhcCCceeehhhhhhhhh----HHHhcCc
Confidence 0011122335556432 23322 22456788888888888999888777888877 8999999
Q ss_pred EEeeec
Q 014721 178 SKFRTP 183 (419)
Q Consensus 178 ~~~~~~ 183 (419)
-+-...
T Consensus 393 g~GdG~ 398 (421)
T KOG2779|consen 393 GPGDGN 398 (421)
T ss_pred CcCCCc
Confidence 865443
No 129
>COG5027 SAS2 Histone acetyltransferase (MYST family) [Chromatin structure and dynamics]
Probab=38.57 E-value=23 Score=35.75 Aligned_cols=27 Identities=19% Similarity=0.134 Sum_probs=20.4
Q ss_pred EEEEEECcchhcCCHHHHHHHHHHHHH
Q 014721 122 ILGLRVSPSHRRMGIGLKLVKRMEEWF 148 (419)
Q Consensus 122 I~~L~V~P~yRgkGIG~~Ll~~~~~~a 148 (419)
+..+-+.|-|||+|+|+-|++-.-...
T Consensus 265 LaCILtLP~yQRrGYG~lLIdFSY~Ls 291 (395)
T COG5027 265 LACILTLPPYQRRGYGKLLIDFSYLLS 291 (395)
T ss_pred eEEEEecChhHhcccceEeeeeeeecc
Confidence 344668999999999999987654433
No 130
>PF07395 Mig-14: Mig-14; InterPro: IPR009977 This family contains a number of bacterial mig-14 proteins (approximately 270 residues long). In Salmonella, mig-14 contributes to resistance to antimicrobial peptides, although the mechanism is not fully understood [].
Probab=38.22 E-value=88 Score=30.53 Aligned_cols=110 Identities=16% Similarity=0.109 Sum_probs=64.5
Q ss_pred EEECCCcCcHHHHHHHHHHHccCCCCCcchhhhhccChhhhhhcCCCcEEEEEEECCeEEEEEEeEeeecccCccccccc
Q 014721 21 VREFDPNKDCLGVEDVERRCEVGPSGKLCLFTDLLGDPICRVRHSPAFLMLVAEVGDEIVGMIRGCIKTVTCGKRISRNT 100 (419)
Q Consensus 21 IR~~~~~~Dl~~I~eL~~~~e~~~~g~~~l~~~~~~d~i~ri~~~p~~~~lVAe~dgeiVG~i~~~~~~~~~g~~~~~~~ 100 (419)
|++++ +=.-+++.+++..-+..-||....-.+.+.+.+..+++.--+ -|...+|++|++=.+...+.+...
T Consensus 129 v~~v~-~~S~~Ela~iY~~Lf~~Rwg~~~~~~~~l~e~f~~Lr~~~fG--~vL~l~~~P~Aiqlv~k~es~~wv------ 199 (264)
T PF07395_consen 129 VRPVS-EFSPEELADIYIDLFQKRWGFRCYGKEHLAEFFSELRHMIFG--SVLFLNGQPCAIQLVYKVESPKWV------ 199 (264)
T ss_pred EEEHH-HCCHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHhHHhhee--eEEEECCcceEEEEEEEecCCCeE------
Confidence 44444 444555555555555445553333344555556666654433 345569999998766655432211
Q ss_pred ccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHH----HHHHHHHHHcCCcEEE
Q 014721 101 KYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLV----KRMEEWFRESGVEYSY 157 (419)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll----~~~~~~a~~~G~~~i~ 157 (419)
+ .=| ..-++||+++.--.|+.|+ +.+.+.|+++|.+-.|
T Consensus 200 ---------------~--~D~-iNgG~Dp~~~~~SpGSiL~w~Ni~~A~~~~~~~~k~lrf 242 (264)
T PF07395_consen 200 ---------------Y--FDY-INGGYDPECRDFSPGSILMWLNIQDAWEYCRAQGKPLRF 242 (264)
T ss_pred ---------------E--Eec-ccCccCcccccCCCccEEEEeeHHHHHHHHHHhCCceEE
Confidence 0 011 1134799999999999985 6777788777765443
No 131
>PF10102 DUF2341: Domain of unknown function (DUF2341); InterPro: IPR018765 This domain of unknown function is found in various bacterial proteins, including MotA/TolQ/ExbB proton channels and other transport proteins.
Probab=37.63 E-value=24 Score=28.51 Aligned_cols=25 Identities=24% Similarity=0.767 Sum_probs=21.3
Q ss_pred hccCCcccCCCCCCCcccceEEEEeec
Q 014721 303 DRVFPWLRIPSVPEVFSPFGLHFLYGL 329 (419)
Q Consensus 303 ~~~~~~l~~p~~~~~~~~f~~~~~y~~ 329 (419)
..+.=|+|+|++|. .+=.+|..||-
T Consensus 28 ~~A~iWVkvp~i~~--~~~~i~lyyGn 52 (89)
T PF10102_consen 28 EQALIWVKVPSIPA--GSTTIYLYYGN 52 (89)
T ss_pred CeEEEEEECCCCCC--CCcEEEEEECC
Confidence 35778999999999 88899999984
No 132
>PF04339 DUF482: Protein of unknown function, DUF482; InterPro: IPR007434 This family contains several proteins of uncharacterised function.
Probab=34.94 E-value=2.7e+02 Score=28.57 Aligned_cols=103 Identities=17% Similarity=0.232 Sum_probs=65.1
Q ss_pred EEEEEECCeEEEEEEeEeeecccCcccc-----------cccccccC-CCCCCCCCCCCCCeEEEEEEEECcchhcCCHH
Q 014721 70 MLVAEVGDEIVGMIRGCIKTVTCGKRIS-----------RNTKYTTN-DIEPPKPLPVYTKLAYILGLRVSPSHRRMGIG 137 (419)
Q Consensus 70 ~lVAe~dgeiVG~i~~~~~~~~~g~~~~-----------~~~~~~~~-~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG 137 (419)
.+++.++|++||.+-+..|.-..|..-+ .-.-+.+. ...|+.|.. + ..+-++|......+.
T Consensus 46 hl~~~~~~~lvaa~P~YlK~hS~GEyvFD~~Wa~a~~r~g~~YYPKlv~avPfTPv~-----G--~R~l~~~~~~~~~~~ 118 (370)
T PF04339_consen 46 HLTLRDGGRLVAAAPLYLKSHSYGEYVFDWAWADAYQRAGLRYYPKLVGAVPFTPVT-----G--PRLLIAPGADRAALR 118 (370)
T ss_pred EEEEEECCEEEEEeeeeeecccCcceehhHHHHHHHHHhccccCcceEeeeCCCCCc-----c--cceeECCCCCHHHHH
Confidence 4677788999999999888765554300 00000011 112222211 1 136678888889999
Q ss_pred HHHHHHHHHHHHHcCCcEEEEEEccCChHHHHHHHHhCCCEEeee
Q 014721 138 LKLVKRMEEWFRESGVEYSYIATENDNYASVKLFTDKCGYSKFRT 182 (419)
Q Consensus 138 ~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~lFY~K~GF~~~~~ 182 (419)
..|++.+.+.++++|+..+.+.- .+... ..+ .+..||.....
T Consensus 119 ~~L~~~~~~~a~~~~~Ss~h~lF-~~~~~-~~~-l~~~G~~~r~~ 160 (370)
T PF04339_consen 119 AALLQALEQLAEENGLSSWHILF-PDEED-AAA-LEEAGFLSRQG 160 (370)
T ss_pred HHHHHHHHHHHHHcCCCcceeec-CCHHH-HHH-HHhCCCceecC
Confidence 99999999999999998776642 22222 344 47899986533
No 133
>COG3473 Maleate cis-trans isomerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=29.38 E-value=1.2e+02 Score=28.63 Aligned_cols=86 Identities=19% Similarity=0.244 Sum_probs=56.5
Q ss_pred HHHHHHcCCcEEEEEE---ccCChHHHHHHHHhCCCEEeeeceeeecccccccccCCcceeeeecChhhHHHHHHHhcCC
Q 014721 145 EEWFRESGVEYSYIAT---ENDNYASVKLFTDKCGYSKFRTPSILVNPVFAHRLIVPKQVTIIQLNPSDAEAFYRRKFST 221 (419)
Q Consensus 145 ~~~a~~~G~~~i~l~t---~~~N~~s~~lFY~K~GF~~~~~~~~~~~pv~~~~~~~~~~v~i~~l~~~~a~~ly~~~~~~ 221 (419)
.+.++..|++.+.+.| ..-|..... |+++.||+.+.. .. ..++.+..+-+++|.....+-++.
T Consensus 110 v~aL~al~a~ri~vlTPY~~evn~~e~e-f~~~~Gfeiv~~-~~---------Lgi~dn~eigr~~P~~~y~lAk~~--- 175 (238)
T COG3473 110 VEALNALGAQRISVLTPYIDEVNQREIE-FLEANGFEIVDF-KG---------LGITDNLEIGRQEPWAVYRLAKEV--- 175 (238)
T ss_pred HHHHHhhCcceEEEeccchhhhhhHHHH-HHHhCCeEEEEe-ec---------cCCcccchhcccChHHHHHHHHHh---
Confidence 3445566787777764 566777555 899999998876 22 346677788888888766665444
Q ss_pred CCCCCcChhHHhhccCCcceEEEEeC
Q 014721 222 TEFFPRDIDSVLNNKLNLGTFLAVPR 247 (419)
Q Consensus 222 ~ef~P~d~d~iL~~~l~~gt~~a~~~ 247 (419)
+-.|-|++.-...++.|+-.+.+
T Consensus 176 ---~~~~~DaiFiSCTnlRt~eii~~ 198 (238)
T COG3473 176 ---FTPDADAIFISCTNLRTFEIIEK 198 (238)
T ss_pred ---cCCCCCeEEEEeeccccHHHHHH
Confidence 34456666555556666655543
No 134
>COG2898 Uncharacterized conserved protein [Function unknown]
Probab=29.37 E-value=4.7e+02 Score=28.31 Aligned_cols=61 Identities=16% Similarity=0.092 Sum_probs=43.6
Q ss_pred EEEEECCeEEEEEEeEeeecccCcccccccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHH
Q 014721 71 LVAEVGDEIVGMIRGCIKTVTCGKRISRNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRE 150 (419)
Q Consensus 71 lVAe~dgeiVG~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~ 150 (419)
.+.+.+|+|||++....... .....+.-++-+|+-- +|+-..|+.++..++++
T Consensus 396 a~~~~~g~VvaFa~l~~~~~--------------------------~~~~SlDlMR~sp~ap-~g~mdfLf~~li~~aKe 448 (538)
T COG2898 396 AAVDNEGEVVAFANLMPTGG--------------------------KEGYSLDLMRRSPDAP-NGTMDFLFSELILWAKE 448 (538)
T ss_pred eEEcCCCCeEEEEeecccCC--------------------------cceeEEEeeecCCCCC-chHHHHHHHHHHHHHHH
Confidence 34455788999986654321 1334555566777754 59999999999999999
Q ss_pred cCCcEEEE
Q 014721 151 SGVEYSYI 158 (419)
Q Consensus 151 ~G~~~i~l 158 (419)
+|++.+-|
T Consensus 449 ~G~~~fsL 456 (538)
T COG2898 449 EGYQRFSL 456 (538)
T ss_pred cCCeEEec
Confidence 99976644
No 135
>PRK02983 lysS lysyl-tRNA synthetase; Provisional
Probab=28.57 E-value=4.8e+02 Score=30.85 Aligned_cols=63 Identities=13% Similarity=0.064 Sum_probs=46.0
Q ss_pred EEEEE-ECCeEEEEEEeEeeecccCcccccccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHH
Q 014721 70 MLVAE-VGDEIVGMIRGCIKTVTCGKRISRNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWF 148 (419)
Q Consensus 70 ~lVAe-~dgeiVG~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a 148 (419)
++++. .+|+|+|++...+.. . .-..+.-++-+|+- =+|+--.|+-++++++
T Consensus 422 i~~a~d~~G~i~af~s~~p~~-~--------------------------~g~slDLMRr~pda-pnGvmE~L~~~l~~~~ 473 (1094)
T PRK02983 422 LVEAHDADGQVVALLSFVPWG-R--------------------------RGLSLDLMRRSPDA-PNGVIELMVAELALEA 473 (1094)
T ss_pred EEEEECCCCeEEEEEEEeeeC-C--------------------------CCEEEEecccCCCC-CCCHHHHHHHHHHHHH
Confidence 33343 369999999776532 1 12345556666764 6799999999999999
Q ss_pred HHcCCcEEEEEE
Q 014721 149 RESGVEYSYIAT 160 (419)
Q Consensus 149 ~~~G~~~i~l~t 160 (419)
++.|++++-|..
T Consensus 474 k~~G~~~~sLg~ 485 (1094)
T PRK02983 474 ESLGITRISLNF 485 (1094)
T ss_pred HHcCCCEEEech
Confidence 999999988763
No 136
>PRK15312 antimicrobial resistance protein Mig-14; Provisional
Probab=27.47 E-value=1.8e+02 Score=28.92 Aligned_cols=109 Identities=10% Similarity=-0.041 Sum_probs=61.4
Q ss_pred EEECCCcCcHHHHHHHHHHHccCCCCCcch--hhhhccChhhhhhcCCCcEEEEEEECCeEEEEEEeEeeecccCccccc
Q 014721 21 VREFDPNKDCLGVEDVERRCEVGPSGKLCL--FTDLLGDPICRVRHSPAFLMLVAEVGDEIVGMIRGCIKTVTCGKRISR 98 (419)
Q Consensus 21 IR~~~~~~Dl~~I~eL~~~~e~~~~g~~~l--~~~~~~d~i~ri~~~p~~~~lVAe~dgeiVG~i~~~~~~~~~g~~~~~ 98 (419)
||+.+ .=--+++.+++.+-+..-||...- ..+.+.+.+.++++.--+ -|+..+|+++++-.+...+.+...
T Consensus 157 v~~is-~fS~~Ela~iY~~Lf~~Rwg~~~~~~~~~~l~e~f~~Lr~l~fG--~VLfl~~~PcA~qlv~k~eSp~wi---- 229 (298)
T PRK15312 157 VKSVA-DCSSDELTHIFIELFRSRFGNTLSCYPADNLANFFSQLRHLLFG--HILYIEGIPCAFDIVLKSESQMNV---- 229 (298)
T ss_pred EEEhH-HCCHHHHHHHHHHHHHHHhCCCCCcccHHHHHHHHHHhHHhhee--eEEEECCcceEEEEEEEecCCCcE----
Confidence 44444 333444444444444444442221 344555556666665533 355669999998766655533211
Q ss_pred ccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHH----HHHHHHHHHcCCcEE
Q 014721 99 NTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLV----KRMEEWFRESGVEYS 156 (419)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll----~~~~~~a~~~G~~~i 156 (419)
-.-+| .-++||+++..-.|+.|+ +.+-+.|+++|.+-.
T Consensus 230 -------------------~~D~i-NgG~Dpe~~~~spGSIL~WlNi~~A~~~~~~~~K~lr 271 (298)
T PRK15312 230 -------------------YFDVP-NGAVKNECMPLSPGSILMWLNISRARHYCQERQKKLI 271 (298)
T ss_pred -------------------EEecc-cCccCcccccCCCccEEEEecHHHHHHHHHhcCCcEE
Confidence 11121 234899999999999885 666666766665433
No 137
>COG2935 Putative arginyl-tRNA:protein arginylyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=26.56 E-value=2.5e+02 Score=27.19 Aligned_cols=52 Identities=15% Similarity=0.187 Sum_probs=41.7
Q ss_pred EEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChHHHHHHHHhCCCEEeeec
Q 014721 125 LRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYASVKLFTDKCGYSKFRTP 183 (419)
Q Consensus 125 L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~lFY~K~GF~~~~~~ 183 (419)
..-+|++...++|+-.+-.-+.++++.|..++||.--..+ -.|++|+...++
T Consensus 180 ~FydPd~s~~SLGt~~iL~~I~~aq~~~l~yvYLGYwI~~-------c~KM~YKa~f~P 231 (253)
T COG2935 180 TFYDPDMSKRSLGTLSILDQIAIAQRLGLPYVYLGYWIKG-------CPKMNYKARFSP 231 (253)
T ss_pred EEeCCChhhhcchHHHHHHHHHHHHHhCCCeEEEEEEECC-------ccccCcccccCh
Confidence 3469999999999999999999999999999999865553 246666655543
No 138
>KOG2696 consensus Histone acetyltransferase type b catalytic subunit [Chromatin structure and dynamics]
Probab=26.39 E-value=91 Score=31.85 Aligned_cols=47 Identities=19% Similarity=0.225 Sum_probs=32.7
Q ss_pred eEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChH
Q 014721 119 LAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYA 166 (419)
Q Consensus 119 ~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~ 166 (419)
..-|..+-+.|.||++|+|+.|++.+....... -+.+-++++..+.+
T Consensus 217 R~RiSQmlilpPfq~~Glgs~l~E~i~r~~~~~-p~v~DiTVEdPse~ 263 (403)
T KOG2696|consen 217 RPRISQMLILPPFQGKGLGSQLYEAIARDYLEE-PTVLDITVEDPSEA 263 (403)
T ss_pred hhhhheeEEeccccCCchHHHHHHHHHHhhccC-CceeEEEecCchHH
Confidence 445677889999999999999999998655432 22344455544444
No 139
>PF12261 T_hemolysin: Thermostable hemolysin; InterPro: IPR022050 This family of proteins is found in bacteria. Proteins in this family are typically between 200 and 228 amino acids in length. T_hemolysin is a pore-forming toxin of bacteria, able to lyse erythrocytes from a number of mammalian species.
Probab=26.17 E-value=1.1e+02 Score=28.17 Aligned_cols=58 Identities=12% Similarity=0.142 Sum_probs=43.7
Q ss_pred CCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEccCChHHHHHHHHhCCCEEee
Q 014721 116 YTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATENDNYASVKLFTDKCGYSKFR 181 (419)
Q Consensus 116 ~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~s~~lFY~K~GF~~~~ 181 (419)
.....+|..|+.. +.|.+..|+..+-..+..+|++.+..+. ...-.++ +.|+|.....
T Consensus 84 R~~IvEvGnLAs~----~~g~~~~l~~~l~~~L~~~g~~w~vfTa---T~~lr~~-~~rlgl~~~~ 141 (179)
T PF12261_consen 84 RSQIVEVGNLASF----SPGAARLLFAALAQLLAQQGFEWVVFTA---TRQLRNL-FRRLGLPPTV 141 (179)
T ss_pred hhheeEeechhhc----CcccHHHHHHHHHHHHHHCCCCEEEEeC---CHHHHHH-HHHcCCCcee
Confidence 3467788888776 6899999999999999999999874433 2233455 6899987543
No 140
>PRK00756 acyltransferase NodA; Provisional
Probab=26.14 E-value=2.1e+02 Score=26.06 Aligned_cols=43 Identities=21% Similarity=0.304 Sum_probs=35.3
Q ss_pred CeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHcCCcEEEEEEc
Q 014721 118 KLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRESGVEYSYIATE 161 (419)
Q Consensus 118 ~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~G~~~i~l~t~ 161 (419)
-++++.-.+|.|+..|.||+..+ +.+.--+++.|+...+-++.
T Consensus 84 LVaElGLygVRpDLEGlGi~~S~-r~m~PvLq~LgVPF~FGtVR 126 (196)
T PRK00756 84 LVAELGLYGVRPDLEGLGIAHSI-RAMYPVLQELGVPFAFGTVR 126 (196)
T ss_pred eEEEeeeeeeccccccccchhhH-HHHHHHHHhcCCCeecccch
Confidence 57788888999999999999877 67778888889887766554
No 141
>COG5630 ARG2 Acetylglutamate synthase [Amino acid transport and metabolism]
Probab=26.13 E-value=1.4e+02 Score=30.75 Aligned_cols=32 Identities=22% Similarity=0.268 Sum_probs=28.6
Q ss_pred CeEEEEEEEECcchhc-CCHHHHHHHHHHHHHH
Q 014721 118 KLAYILGLRVSPSHRR-MGIGLKLVKRMEEWFR 149 (419)
Q Consensus 118 ~~~~I~~L~V~P~yRg-kGIG~~Ll~~~~~~a~ 149 (419)
++.|+..++|.++-+| -||+..++.-+-+.+-
T Consensus 399 ~vpYLDKfAVl~~aQGs~gisd~vfniM~e~fP 431 (495)
T COG5630 399 NVPYLDKFAVLDDAQGSEGISDAVFNIMREEFP 431 (495)
T ss_pred CCcceeeeeccccccccchHHHHHHHHHHHhCc
Confidence 6789999999999999 8999999998877663
No 142
>COG5653 Protein involved in cellulose biosynthesis (CelD) [Cell envelope biogenesis, outer membrane]
Probab=25.04 E-value=7.9e+02 Score=25.54 Aligned_cols=69 Identities=13% Similarity=0.100 Sum_probs=49.4
Q ss_pred CcEEEEEEECCeEEEEEEeEeeecccCcccccccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHH
Q 014721 67 AFLMLVAEVGDEIVGMIRGCIKTVTCGKRISRNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEE 146 (419)
Q Consensus 67 ~~~~lVAe~dgeiVG~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~ 146 (419)
....+..+.+|.+|+......+. ......-..++|++-+--=|..|+..+++
T Consensus 271 ~~rl~gL~~G~~lvAV~~~lr~~----------------------------~t~h~~l~a~dpe~~~~SPG~~lf~d~i~ 322 (406)
T COG5653 271 SGRLFGLHAGGRLVAVHGLLRQG----------------------------GTYHAWLGAIDPEFARASPGMLLFLDLIE 322 (406)
T ss_pred ceEEEEEeeCCEEEEEEeeeccC----------------------------CEEEEEeeccCHHHhhcCchHHHHHHHHH
Confidence 34456677788999976444332 22222335689999999999999999999
Q ss_pred HHHHcCCcEEEEEEccC
Q 014721 147 WFRESGVEYSYIATEND 163 (419)
Q Consensus 147 ~a~~~G~~~i~l~t~~~ 163 (419)
|+-..|+...-+.+..+
T Consensus 323 ~~~~~g~~~~DfgvG~q 339 (406)
T COG5653 323 WACGQGLARFDFGVGDQ 339 (406)
T ss_pred HHhcCCCeEEeecCCCh
Confidence 99999997776555444
No 143
>PF11124 Pho86: Inorganic phosphate transporter Pho86; InterPro: IPR024297 Pho86p is an ER protein which is produced in response to phosphate starvation. It is essential for growth when phosphate levels are limiting []. Pho86p is also involved in the regulation of Pho84p, a high-affinity phosphate transporter, which is localised to the endoplasmic reticulum (ER) in low phosphate medium. When the level of phosphate increases Pho84p is transported to the vacuole. Pho86p is required for packaging of Pho84p in to COPII vesicles [].
Probab=21.59 E-value=6.6e+02 Score=25.08 Aligned_cols=86 Identities=15% Similarity=0.101 Sum_probs=59.7
Q ss_pred ECCeEEEEEEeEeeecccCcccccccccccCCCCCCCCCCCCCCeEEEEEEEECcchhcCCHHHHHHHHHHHHHHHc---
Q 014721 75 VGDEIVGMIRGCIKTVTCGKRISRNTKYTTNDIEPPKPLPVYTKLAYILGLRVSPSHRRMGIGLKLVKRMEEWFRES--- 151 (419)
Q Consensus 75 ~dgeiVG~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~L~V~P~yRgkGIG~~Ll~~~~~~a~~~--- 151 (419)
.-+.+|+.+.......-. ....-+..|.++.|..-|..-|+-.-|+++++-+.++-
T Consensus 176 YRetPIAiisl~~~~~~S---------------------t~~~~vv~ItgigvRkVy~Ksgi~e~LidWA~~Rtr~l~~e 234 (304)
T PF11124_consen 176 YRETPIAIISLVPNKDQS---------------------TKENFVVKITGIGVRKVYVKSGIDEDLIDWAMLRTRQLYKE 234 (304)
T ss_pred EcCCceEEEEeccccccC---------------------CCceEEEEEeeeEEEEEEeecChHHHHHHHHHHHHHHHHHH
Confidence 466899988766554210 11224678999999999999999999999998777652
Q ss_pred ------CCc-EEEEEEccCChHHHHHHHHhCCCEEeee
Q 014721 152 ------GVE-YSYIATENDNYASVKLFTDKCGYSKFRT 182 (419)
Q Consensus 152 ------G~~-~i~l~t~~~N~~s~~lFY~K~GF~~~~~ 182 (419)
|.. .+...+..-...-.+. .++.||.....
T Consensus 235 y~k~k~~~si~ll~d~YSFD~~~~k~-L~~~gF~~i~s 271 (304)
T PF11124_consen 235 YLKGKKGCSIKLLVDVYSFDKDMKKT-LKKKGFKKISS 271 (304)
T ss_pred hccccccceEEEEEEeeeccHHHHHH-HHHCCCeeeec
Confidence 221 2233455555565664 79999999884
No 144
>TIGR02852 spore_dpaB dipicolinic acid synthetase, B subunit. Members of this family represent the B subunit of dipicolinic acid synthetase, an enzyme that synthesizes a small molecule that appears to confer heat stability to bacterial endospores such as those of Bacillus subtilis. The A and B subunits are together in what was originally designated the spoVF locus for stage V of endospore formation.
Probab=21.10 E-value=83 Score=29.05 Aligned_cols=30 Identities=23% Similarity=0.206 Sum_probs=24.4
Q ss_pred HHHHHHHhhhhh-cCccEEEEeccCCCcccc
Q 014721 342 ALCGHAHNLAKE-RGCGVVATEVSSREPLKL 371 (419)
Q Consensus 342 ~l~~~~~n~~~~-~~~~~~~~~~~~~dp~~~ 371 (419)
+++.|+.|+.+= +.=++.+.++|++||..+
T Consensus 128 ~m~~~~~Ni~~L~~~~g~~~v~f~qd~~~~k 158 (187)
T TIGR02852 128 ALGLNAVNLMRLLNTKNIYFVPFGQDDPFKK 158 (187)
T ss_pred HHHhCHHHHHHHHHcCCEEEEeecCCCCCCC
Confidence 566677898883 456999999999999875
No 145
>PF04444 Dioxygenase_N: Catechol dioxygenase N terminus; InterPro: IPR007535 This domain is the N-terminal region of catechol, chlorocatechol or hydroxyquinol 1,2-dioxygenase proteins. This region is always found adjacent to the dioxygenase domain (IPR000627 from INTERPRO). Dioxygenases catalyse the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms. Cleavage of aromatic rings is one of the most important functions of dioxygenases, which play key roles in the degradation of aromatic compounds. The substrates of ring-cleavage dioxygenases can be classified into two groups according to the mode of scission of the aromatic ring. Intradiol enzymes use a non-haem Fe(III) to cleave the aromatic ring between two hydroxyl groups (ortho-cleavage), whereas extradiol enzymes (IPR000486 from INTERPRO) use a non-haem Fe(II) to cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon (meta-cleavage) []. These two subfamilies differ in sequence, structural fold, iron ligands, and the orientation of second sphere active site amino acid residues. Enzymes that belong to the intradiol family include catechol 1,2-dioxygenase (1,2-CTD) (1.13.11.1 from EC); protocatechuate 3,4-dioxygenase (3,4-PCD) (1.13.11.3 from EC); and chlorocatechol 1,2-dioxygenase (1.13.11.1 from EC) [].; GO: 0005506 iron ion binding, 0018576 catechol 1,2-dioxygenase activity, 0009712 catechol-containing compound metabolic process, 0055114 oxidation-reduction process; PDB: 3O6R_B 1S9A_A 3O6J_A 3O5U_B 3O32_B 3HHY_A 3HHX_A 3HJS_A 3HJQ_A 3HKP_A ....
Probab=20.52 E-value=87 Score=24.41 Aligned_cols=22 Identities=27% Similarity=0.560 Sum_probs=19.7
Q ss_pred ccHHHHHHHHHHHHHhhhhhcC
Q 014721 334 PRAAKLVKALCGHAHNLAKERG 355 (419)
Q Consensus 334 ~~~~~~~~~l~~~~~n~~~~~~ 355 (419)
|+..++|.+|.+|.|..+++.+
T Consensus 2 ~R~~~i~~~lv~~lh~~i~e~~ 23 (74)
T PF04444_consen 2 PRLKEIMARLVRHLHDFIREVD 23 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCT
T ss_pred hHHHHHHHHHHHHHHHHHHHhC
Confidence 6788999999999999999765
No 146
>cd04266 DUF619-NAGS-FABP DUF619 domain of N-acetylglutamate Synthase of the fungal arginine-biosynthetic pathway. DUF619-NAGS-FABP: This family includes the DUF619 domain of N-acetylglutamate synthase (NAGS) of the fungal arginine-biosynthetic pathway (FABP). This NAGS (also known as arginine-requiring protein 2 or ARG2) consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. NAGS catalyzes the formation of NAG from acetylcoenzyme A and L-glutamate. The DUF619 domain, yet to be characterized, is predicted to function in NAGS association in fungi.
Probab=20.19 E-value=2.5e+02 Score=23.53 Aligned_cols=45 Identities=27% Similarity=0.275 Sum_probs=34.8
Q ss_pred CeEEEEEEEECcchhc-CCHHHHHHHHHHHHHHHcCCcEEEEEEccCChH
Q 014721 118 KLAYILGLRVSPSHRR-MGIGLKLVKRMEEWFRESGVEYSYIATENDNYA 166 (419)
Q Consensus 118 ~~~~I~~L~V~P~yRg-kGIG~~Ll~~~~~~a~~~G~~~i~l~t~~~N~~ 166 (419)
.++|+..++|.+..|| .|++..+++.+.+.. -+.++-.+..+|..
T Consensus 38 ~v~yLdKFav~~~~~gl~gv~D~vf~~m~~~f----p~~L~Wrsr~~n~~ 83 (108)
T cd04266 38 KIAYLDKFAVLPKAQGSDGIADILFNAMLDGF----PNELIWRSRKDNPV 83 (108)
T ss_pred CceEEEEEEEccccccccchHHHHHHHHHHcC----CCceEEEeCCCCcc
Confidence 6789999999999997 899999999988732 11255566666654
Done!