BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014723
(419 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9H6Y7|RN167_HUMAN E3 ubiquitin-protein ligase RNF167 OS=Homo sapiens GN=RNF167 PE=1
SV=1
Length = 350
Score = 119 bits (298), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 134/302 (44%), Gaps = 56/302 (18%)
Query: 27 NNVTLSFDDIEANFAPAIRGSGDCGVLYVAEPLDACSNLTSKVEKVSNMSSAFVLTIRGG 86
+N ++ F D+ A F + G G L A P +ACS + N S L R
Sbjct: 32 HNASMDFADLPALFGATLSQEGLQGFLVEAHPDNACSPIAPPPPAPVNGSVFIALLRRFD 91
Query: 87 CSFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGNSAGIK----IHAVFVSKASGEKLKQ 142
C+F+ KV NAQKAG+ AA+V+ N + L+ M NS I+ I +VF+ + S E L+
Sbjct: 92 CNFDLKVLNAQKAGYGAAVVH-NVNSNELLNMVWNSEEIQQQIWIPSVFIGERSSEYLRA 150
Query: 143 -YAGSTDMEIWIIP--SFENSAW--------------------HRIRREAPRASRGREFH 179
+ + ++P +F + R + R R R
Sbjct: 151 LFVYEKGARVLLVPDNTFPLGYYLIPFTGIVGLLVLAMGAVMIARCIQHRKRLQRNR--- 207
Query: 180 GMSRRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLT 239
+++ +K +P T + CAICL++Y G+KLR+LPC H +H+ CVD WLT
Sbjct: 208 -LTKEQLKQIP----THDYQKGDQYDVCAICLDEYEDGDKLRVLPCAHAYHSRCVDPWLT 262
Query: 240 SWRTFCPVCKRDAR-----------------TSTGEP---PASESTPLLSSSPASSSILS 279
R CP+CK+ GEP PASE TPLL SSP +
Sbjct: 263 QTRKTCPICKQPVHRGPGDEDQEEETQGQEEGDEGEPRDHPASERTPLLGSSPTLPTSFG 322
Query: 280 SI 281
S+
Sbjct: 323 SL 324
>sp|Q90972|RNF13_CHICK E3 ubiquitin-protein ligase RNF13 OS=Gallus gallus GN=RNF13 PE=1
SV=1
Length = 381
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 131/276 (47%), Gaps = 41/276 (14%)
Query: 28 NVTLSFDDIEANFAPAIRGSGDCGVLYVAEPLDACSNLTSKVEKVSNMSSAFVLTIRG-G 86
N T +FDD+ A F + G G L ++P +AC + + N S+AF++ IR
Sbjct: 43 NGTQTFDDLPARFGYRLPAEGLKGFLINSKPENACEPIAPPPLR-DNSSTAFIVLIRRLE 101
Query: 87 CSFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGNS----AGIKIHAVFVSKASGEKLKQ 142
C+F+ KV NAQ+AG++AAIV+ N D L++M N I I +VF+ +AS LK+
Sbjct: 102 CNFDIKVLNAQRAGYKAAIVH-NVDSDDLISMGSNDIEILKKIDIPSVFIGEASANSLKE 160
Query: 143 -YAGSTDMEIWIIPSFENSAWHRIR------------------REAPRASRGREFHGMSR 183
+ + +IP F + + + + + + +
Sbjct: 161 EFTYEKGGHVVLIPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRK 220
Query: 184 RLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRT 243
+K +P F E + CAICL++Y G+KLRILPC H +H CVD WLT +
Sbjct: 221 DQLKKLPVHKFKKGDEYD----VCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 244 FCPVCKRDARTSTG-----------EPPASESTPLL 268
CPVCK+ S G E SE+TPLL
Sbjct: 277 TCPVCKQKVVPSQGDSDSETDSSQEENEVSENTPLL 312
>sp|Q0VD51|RNF13_BOVIN E3 ubiquitin-protein ligase RNF13 OS=Bos taurus GN=RNF13 PE=2 SV=1
Length = 380
Score = 116 bits (291), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 136/294 (46%), Gaps = 43/294 (14%)
Query: 28 NVTLSFDDIEANFAPAIRGSGDCGVLYVAEPLDACSNLTSKVEKVSNMSSAFVLTIRGGC 87
N + +FDD+ A F + G G L ++P +AC + + ++ + VL R C
Sbjct: 43 NASQTFDDLPARFGYRLPAEGLKGFLINSKPENACEPIVPPPVRDNSSGTFIVLIRRLDC 102
Query: 88 SFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGNS----AGIKIHAVFVSKASGEKLK-Q 142
+F++KV NAQ+AG++AAIV+ N D L++M N I I +VF+ ++S LK +
Sbjct: 103 NFDEKVLNAQRAGYKAAIVH-NVDSDDLISMGSNDIEVLKKIDIPSVFIGESSANSLKDE 161
Query: 143 YAGSTDMEIWIIPSFENSAWHRIR------------------REAPRASRGREFHGMSRR 184
+ I ++P F + + + + + + +
Sbjct: 162 FTYEKGGHIILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKD 221
Query: 185 LVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTF 244
+K +P F E + CAICL++Y G+KLRILPC H +H CVD WLT +
Sbjct: 222 QLKKLPVHKFKKGDEYD----VCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKT 277
Query: 245 CPVCKRDARTSTG-----------EPPASESTPLL----SSSPASSSILSSIRS 283
CPVCK+ S G E SE TPLL S+S S LS RS
Sbjct: 278 CPVCKQKVVPSQGDSDSDTDSSQEENEVSEHTPLLRPLASASTQSFGALSESRS 331
>sp|Q66HG0|RNF13_RAT E3 ubiquitin-protein ligase RNF13 OS=Rattus norvegicus GN=Rnf13
PE=2 SV=1
Length = 380
Score = 116 bits (290), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 141/303 (46%), Gaps = 42/303 (13%)
Query: 28 NVTLSFDDIEANFAPAIRGSGDCGVLYVAEPLDACSNLTSKVEKVSNMSSAFVLTIRGGC 87
N + +F+D+ A F + G G L ++P +AC + K ++ + VL R C
Sbjct: 43 NASQTFEDLPARFGYRLPAEGLKGFLINSKPENACEPIVPPPLKDNSSGTFIVLIRRLDC 102
Query: 88 SFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGNSAGI----KIHAVFVSKASGEKLK-- 141
+F+ KV NAQ+AG++AAIV+ N D L++M N I I +VF+ ++S LK
Sbjct: 103 NFDIKVLNAQRAGYKAAIVH-NVDSDDLISMGSNDIDILKKIDIPSVFIGESSANSLKDE 161
Query: 142 ---QYAG--------STDMEIWIIPSFENSAWHRIR------REAPRASRGREFHGMSRR 184
+ G S +E ++IP I + + + + +
Sbjct: 162 FTYEKGGHVILVPELSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRNRRNRLRKD 221
Query: 185 LVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTF 244
+K +P F E + CAICLE+Y G+KLRILPC H +H CVD WLT +
Sbjct: 222 QLKKLPVHKFKKGDEYD----VCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKT 277
Query: 245 CPVCKRDARTSTG-----------EPPASESTPLLSSSPASSSILSSIRSSLASSSALHI 293
CPVCK+ S G E SE TPLL P S+S + SL+ S + H+
Sbjct: 278 CPVCKQKVVPSQGDSDSDTDSSQEENQVSEHTPLL---PPSASARTQSFGSLSESHSHHM 334
Query: 294 PPS 296
S
Sbjct: 335 TES 337
>sp|Q5XIL0|RN167_RAT E3 ubiquitin-protein ligase RNF167 OS=Rattus norvegicus GN=Rnf167
PE=2 SV=1
Length = 349
Score = 115 bits (289), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 134/305 (43%), Gaps = 61/305 (20%)
Query: 27 NNVTLSFDDIEANFAPAIRGSGDCGVLYVAEPLDACSNLTSKVEKVSNMSSAFVLTIRGG 86
+N ++ F D+ A F + G G L A P +ACS + N S L R
Sbjct: 32 HNASMDFADLPALFGATLSDEGLQGFLVEAHPENACSPIAPPPSAPVNGSVFIALLRRFD 91
Query: 87 CSFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGNSAGIK----IHAVFVSKASGEKLKQ 142
C+F+ KV NAQKAG+ AA+V+ N + L+ M NS I+ I +VF+ + S E L+
Sbjct: 92 CNFDLKVLNAQKAGYGAAVVH-NVNSNELLNMVWNSEEIQQQIWIPSVFIGERSAEYLRA 150
Query: 143 -YAGSTDMEIWIIPSFENSAWHRIRREAPRASRGREFHGMSRRLVKAMPSLIFTAVVE-- 199
+ + ++P +NS P F G+ LV AM +++ ++
Sbjct: 151 LFVYEKGARVLLVP--DNSF--------PLGYYLIPFTGIVGLLVLAMGTVLIVRCIQHR 200
Query: 200 -----DNCTSR-----------------TCAICLEDYSVGEKLRILPCRHKFHAFCVDSW 237
+ T CAICL++Y G+KLRILPC H +H+ CVD W
Sbjct: 201 KRLQRNRLTKEQLKQIPTHDYQKGDEYDVCAICLDEYEDGDKLRILPCAHAYHSRCVDPW 260
Query: 238 LTSWRTFCPVCKRDARTSTG---------------------EPPASESTPLLSSSPASSS 276
LT R CP+CK+ G + PASE TPLL SSP +
Sbjct: 261 LTQTRKTCPICKQPVHRGPGDEEQEEETQGQEEEGDEGEPRDQPASEWTPLLGSSPTLPT 320
Query: 277 ILSSI 281
S+
Sbjct: 321 SFGSL 325
>sp|O54965|RNF13_MOUSE E3 ubiquitin-protein ligase RNF13 OS=Mus musculus GN=Rnf13 PE=1
SV=2
Length = 381
Score = 115 bits (288), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 139/299 (46%), Gaps = 42/299 (14%)
Query: 28 NVTLSFDDIEANFAPAIRGSGDCGVLYVAEPLDACSNLTSKVEKVSNMSSAFVLTIRGGC 87
N + +F+D+ A F + G G L ++P +AC + K ++ + VL R C
Sbjct: 43 NASQTFEDLPARFGYRLPAEGLKGFLINSKPENACEPIVPPPLKDNSSGTFIVLIRRLDC 102
Query: 88 SFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGNSAG----IKIHAVFVSKASGEKLK-- 141
+F+ KV NAQ+AG++AAIV+ N D L++M N I I +VF+ ++S LK
Sbjct: 103 NFDIKVLNAQRAGYKAAIVH-NVDSDDLISMGSNDIDTLKKIDIPSVFIGESSANSLKDE 161
Query: 142 ---QYAG--------STDMEIWIIPSFENSAWHRIR------REAPRASRGREFHGMSRR 184
+ G S +E ++IP I + + + + +
Sbjct: 162 FTYEKGGHIILVPELSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRNRRNRLRKD 221
Query: 185 LVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTF 244
+K +P F E + CAICLE+Y G+KLRILPC H +H CVD WLT +
Sbjct: 222 QLKKLPVHKFKKGDEYD----VCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKT 277
Query: 245 CPVCKRDARTSTG-----------EPPASESTPLLSSSPASSSILSSIRSSLASSSALH 292
CPVCK+ S G E SE TPLL P S+S + SL+ S + H
Sbjct: 278 CPVCKQKVVPSQGDSDSDTDSSQEENQVSEHTPLL---PPSASARTQSFGSLSESHSHH 333
>sp|Q91XF4|RN167_MOUSE E3 ubiquitin-protein ligase RNF167 OS=Mus musculus GN=Rnf167 PE=2
SV=1
Length = 347
Score = 115 bits (287), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 133/304 (43%), Gaps = 60/304 (19%)
Query: 27 NNVTLSFDDIEANFAPAIRGSGDCGVLYVAEPLDACSNLTSKVEKVSNMSSAFVLTIRGG 86
+N ++ F D+ A F + G G L A P +AC + N S L R
Sbjct: 32 HNASMDFADLPALFGATLSDEGLQGFLVEAHPENACGPIAPPPSAPVNGSVFIALLRRFD 91
Query: 87 CSFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGNSAGIK----IHAVFVSKASGEKLKQ 142
C+F+ KV NAQKAG+ AA+V+ N + L+ M NS I+ I +VF+ + S E L+
Sbjct: 92 CNFDLKVLNAQKAGYGAAVVH-NVNSNELLNMVWNSEEIQQQIWIPSVFIGERSAEYLRA 150
Query: 143 -YAGSTDMEIWIIPSFENSAWHRIRREAPRASRGREFHGMSRRLVKAMPSLIFTAVVE-- 199
+ + ++P +NS P F G+ LV AM +++ ++
Sbjct: 151 LFVYEKGARVLLVP--DNSF--------PLGYYLIPFTGIVGLLVLAMGTVLIVRCIQHR 200
Query: 200 -----DNCTSR-----------------TCAICLEDYSVGEKLRILPCRHKFHAFCVDSW 237
+ T CAICL++Y G+KLR+LPC H +H+ CVD W
Sbjct: 201 KRLQRNRLTKEQLKQIPTHDYQKGDEYDVCAICLDEYEDGDKLRVLPCAHAYHSRCVDPW 260
Query: 238 LTSWRTFCPVCKRDARTSTG--------------------EPPASESTPLLSSSPASSSI 277
LT R CP+CK+ G + PASE TPLL SSP +
Sbjct: 261 LTQTRKTCPICKQPVHRGPGDEEQEEETQEQEEGDEGEPRDQPASEWTPLLGSSPTLPTS 320
Query: 278 LSSI 281
S+
Sbjct: 321 FGSL 324
>sp|Q5RCV8|RNF13_PONAB E3 ubiquitin-protein ligase RNF13 OS=Pongo abelii GN=RNF13 PE=2
SV=1
Length = 381
Score = 113 bits (282), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 134/294 (45%), Gaps = 43/294 (14%)
Query: 28 NVTLSFDDIEANFAPAIRGSGDCGVLYVAEPLDACSNLTSKVEKVSNMSSAFVLTIRGGC 87
N + +FDD+ A F + G G L ++P +AC + K ++ + VL R C
Sbjct: 43 NASQTFDDLPARFGYRLPAEGLKGFLINSKPENACEPIVPPPVKDNSSGTFIVLIRRLDC 102
Query: 88 SFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGNS----AGIKIHAVFVSKASGEKLK-Q 142
+F+ KV NAQ+AG++AAIV+ N D L++M N I I +VF+ ++S LK +
Sbjct: 103 NFDIKVLNAQRAGYKAAIVH-NVDSDDLISMGSNDIEVLKKIDIPSVFIGESSANSLKDE 161
Query: 143 YAGSTDMEIWIIPSFENSAWHRIR------------------REAPRASRGREFHGMSRR 184
+ + ++P F + + + + + + +
Sbjct: 162 FTYEKGGHLILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKD 221
Query: 185 LVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTF 244
+K +P F E + CAICL++Y G+KLRILPC H +H CVD WLT +
Sbjct: 222 QLKKLPVHKFKKGDEYD----VCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKT 277
Query: 245 CPVCKRDARTSTG-----------EPPASESTPLL----SSSPASSSILSSIRS 283
CPVCK+ S G E +E TPLL S S S LS RS
Sbjct: 278 CPVCKQKVVPSQGDSDSDTDSSQEENEVTEHTPLLRPLASVSAQSFGALSESRS 331
>sp|O43567|RNF13_HUMAN E3 ubiquitin-protein ligase RNF13 OS=Homo sapiens GN=RNF13 PE=1
SV=1
Length = 381
Score = 113 bits (282), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 134/294 (45%), Gaps = 43/294 (14%)
Query: 28 NVTLSFDDIEANFAPAIRGSGDCGVLYVAEPLDACSNLTSKVEKVSNMSSAFVLTIRGGC 87
N + +FDD+ A F + G G L ++P +AC + K ++ + VL R C
Sbjct: 43 NASQTFDDLPARFGYRLPAEGLKGFLINSKPENACEPIVPPPVKDNSSGTFIVLIRRLDC 102
Query: 88 SFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGNS----AGIKIHAVFVSKASGEKLK-Q 142
+F+ KV NAQ+AG++AAIV+ N D L++M N I I +VF+ ++S LK +
Sbjct: 103 NFDIKVLNAQRAGYKAAIVH-NVDSDDLISMGSNDIEVLKKIDIPSVFIGESSANSLKDE 161
Query: 143 YAGSTDMEIWIIPSFENSAWHRIR------------------REAPRASRGREFHGMSRR 184
+ + ++P F + + + + + + +
Sbjct: 162 FTYEKGGHLILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKD 221
Query: 185 LVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTF 244
+K +P F E + CAICL++Y G+KLRILPC H +H CVD WLT +
Sbjct: 222 QLKKLPVHKFKKGDEYD----VCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKT 277
Query: 245 CPVCKRDARTSTG-----------EPPASESTPLL----SSSPASSSILSSIRS 283
CPVCK+ S G E +E TPLL S S S LS RS
Sbjct: 278 CPVCKQKVVPSQGDSDSDTDSSQEENEVTEHTPLLRPLASVSAQSFGALSESRS 331
>sp|Q4R6Y5|ZNRF4_MACFA Zinc/RING finger protein 4 OS=Macaca fascicularis GN=ZNRF4 PE=2
SV=1
Length = 429
Score = 95.5 bits (236), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 129/277 (46%), Gaps = 35/277 (12%)
Query: 3 LSVVYLLCVLLICRLASANVVLIGNNVTLSFDDIEANFAPAIRGSGDCGVLYVAEPLDAC 62
+ + +L VL + A +L + ++ F D+ A F + G G L +P +AC
Sbjct: 83 VKALLVLSVLQVPAQAVVRAMLEDISSSVDFADLPALFGVPLAPEGIRGYLMEVKPANAC 142
Query: 63 SNLTSKVEKVSNMS-SAFVLTIRGGCSFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGN 121
+ + ++ N S A L R C+F+ KV NAQ+AGFEAAIV++ D LV+M
Sbjct: 143 HPV--EAPRLGNRSLGAIALIRRYDCTFDLKVLNAQRAGFEAAIVHNVHSDD-LVSMTHV 199
Query: 122 SAGIK----IHAVFVSKASGEKLKQYAG-STDMEIWIIPS-----------FENSAWHRI 165
S ++ I +VFV +A+ + L+ G + ++P +W
Sbjct: 200 SEDLRGQIAIPSVFVGEAASQDLRVILGCDKSAHVLLLPDDPPCRDLDCHPVLTVSWALG 259
Query: 166 RREAPRASRGREFHGM---------SRRLVKAMPSLIFTAVVEDNCTSRT--CAICLEDY 214
R A S + + RRLVK S A V T R CAICL++Y
Sbjct: 260 RTLALVVSTLFVLNRLWLWAQACCSHRRLVKT--STCQKAQVR-TFTRRNDLCAICLDEY 316
Query: 215 SVGEKLRILPCRHKFHAFCVDSWLTSW-RTFCPVCKR 250
G++L+ILPC H +H C+D W + R CPVCK+
Sbjct: 317 EEGDQLKILPCSHTYHCKCIDPWFSQAPRRSCPVCKQ 353
>sp|Q3U2C5|RN149_MOUSE E3 ubiquitin-protein ligase RNF149 OS=Mus musculus GN=Rnf149 PE=2
SV=3
Length = 394
Score = 82.8 bits (203), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 120/267 (44%), Gaps = 38/267 (14%)
Query: 47 SGDCGVLYVAEPLDACSNLTSKVEKVSNMSSAFV-LTIRGGCSFEDKVRNAQKAGFEAAI 105
G GV P + C+ T V + ++ +V L RGGC+F+DKV A + A +
Sbjct: 73 QGLVGVPRAPAPAEGCAPDTRFVAPGALGNAPWVALVARGGCTFKDKVLAAARRNASAVV 132
Query: 106 VYDNEDDG-------------VLVAMAGNSAGIKIHAVFVSKASGEKLKQYAGSTDMEIW 152
VY+ E +G ++V M G +I V K K++ G+ M+ +
Sbjct: 133 VYNLESNGNATEPMSHAGTGNIVVIMISYPKGREIFD-LVQKGIPVKMRIEIGTRHMQEF 191
Query: 153 I----------------IPSFENSAWHRIRREAPRASR-GREFH-GMSRRLVKAMP-SLI 193
I I S ++ I+R S+ G + H +++++ +P +
Sbjct: 192 ISGQSVVFVAIAFITMMIISLAWLIFYYIQRFLYTGSQFGSQNHRKETKKVIGQLPLHTV 251
Query: 194 FTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRD-- 251
+ + CA+C+E++ V + +RILPC+H FH C+D WL RT CP+CK D
Sbjct: 252 KHGEKGIDVDAENCAVCIENFKVKDVIRILPCKHIFHRICIDPWLLDHRT-CPMCKLDVI 310
Query: 252 -ARTSTGEPPASESTPLLSSSPASSSI 277
A G+P ++ P ++P S+
Sbjct: 311 KALGYWGDPEDTQELPTPEAAPGRVSV 337
>sp|Q9ULK6|RN150_HUMAN RING finger protein 150 OS=Homo sapiens GN=RNF150 PE=2 SV=2
Length = 438
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 122/277 (44%), Gaps = 50/277 (18%)
Query: 84 RGGCSFEDKVRNAQKAGFEAAIVYD---NEDDGVLVAMAGNSAGIKIHAVFVSKASGEK- 139
+G C++ DK+RNA A ++++ N ++ + + AG I A+ + + G++
Sbjct: 123 KGNCTYRDKIRNAFLQNASAVVIFNVGSNTNETITMPHAGVE---DIVAIMIPEPKGKEI 179
Query: 140 --------------------LKQYAGSTDMEI----WIIPSFENSAW---HRIRREAPRA 172
L++Y T + +I+ + AW + I+R
Sbjct: 180 VSLLERNITVTMYITIGTRNLQKYVSRTSVVFVSISFIVLMIISLAWLVFYYIQRFRYAN 239
Query: 173 SRGREFHGMSRRLVKAMPSLIFTAVVEDNCTSRT----CAICLEDYSVGEKLRILPCRHK 228
+R R + KA+ L + + + + + CA+C+E Y + +RILPCRH
Sbjct: 240 ARDRNQRRLGDAAKKAISKLQIRTIKKGDKETESDFDNCAVCIEGYKPNDVVRILPCRHL 299
Query: 229 FHAFCVDSWLTSWRTFCPVCKRDARTSTGEPPASESTPLLSSS-------PASSSILSSI 281
FH CVD WL RT CP+CK + + G PP ++ L + P ++ I +
Sbjct: 300 FHKSCVDPWLLDHRT-CPMCKMNILKALGIPPNADCMDDLPTDFEGSLGGPPTNQITGAS 358
Query: 282 RSSLASSSALHIPPSMSHSPSVSHIHSVASTPYIPQS 318
+++ SS + + P++ +V + V T IPQ
Sbjct: 359 DTTVNESS-VTLDPAVR---TVGALQVVQDTDPIPQE 391
>sp|Q14B02|RN133_MOUSE E3 ubiquitin-protein ligase RNF133 OS=Mus musculus GN=Rnf133 PE=1
SV=1
Length = 382
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 111/278 (39%), Gaps = 63/278 (22%)
Query: 74 NMSSAFVLTIRGGCSFEDKVRNAQKAGFEAAIVYDNEDDG-------------VLVAMAG 120
N L RGGC+F K++ A + G I+Y+ G ++V M G
Sbjct: 97 NKEPWIALIERGGCAFTQKIKVASEHGARGVIIYNFPGTGNQVFPMSHQAFEDIVVVMIG 156
Query: 121 NSAGIKI-------------------HAVFVSK-------ASGEKLKQYAGSTDMEIWII 154
N G++I H ++++ + L + +W+
Sbjct: 157 NIKGMEILHLIRKGVHVTVMVEVGRKHVIWLNHYFVSFMIVTTATLAYFTFYHIRRLWV- 215
Query: 155 PSFENSAWHRIRREAPRASRGREFHGMSRRLVKAMPSLIFTAVVEDNCTSRTCAICLEDY 214
EN W R+ RE +A F + R++K E N + +C IC E Y
Sbjct: 216 ARIENRRWKRLTRELKKA-----FGQLQVRVLKEGDE-------EVNPNADSCVICFEAY 263
Query: 215 SVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTG----EPPASESTPLLSS 270
E +RIL C+H FH C+D W+ + T CP+CK D + G ++S +L S
Sbjct: 264 KPNEIVRILTCKHFFHKNCIDPWILAHGT-CPMCKCDILKALGIQMDIEDGTDSLQVLMS 322
Query: 271 SPASSSILSSIRSSLASSSALHIPPSMSHSPSVSHIHS 308
+ ++ S + + +PP+ + S V+H+
Sbjct: 323 NELPGTL-----SPVEEETNYELPPART-SSKVTHVQE 354
>sp|Q5DTZ6|RN150_MOUSE RING finger protein 150 OS=Mus musculus GN=Rnf150 PE=2 SV=2
Length = 437
Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 91/215 (42%), Gaps = 39/215 (18%)
Query: 84 RGGCSFEDKVRNAQKAGFEAAIVYD---NEDDGVLVAMAGNSAGIKIHAVFVSKASGEK- 139
+G C++ DK+RNA A ++++ N ++ + + AG I A+ + + G++
Sbjct: 122 KGNCTYRDKIRNAFLQNASAVVIFNVGSNTNETITMPHAGVE---DIVAIMIPEPKGKEI 178
Query: 140 --------------------LKQYAGSTDMEI----WIIPSFENSAW------HRIRREA 169
L++Y T + +I+ + AW R R
Sbjct: 179 VSLLERNITVTMYITIGTRNLQKYVSRTSVVFVSISFIVLMIISLAWLVFYYIQRFRYAN 238
Query: 170 PRASRGREFHGMSRRLV-KAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRHK 228
R R +++ + K I E CA+C+E Y + +RILPCRH
Sbjct: 239 ARDRNQRRLGDAAKKAISKLQVRTIRKGDKETESDFDNCAVCIEGYKPNDVVRILPCRHL 298
Query: 229 FHAFCVDSWLTSWRTFCPVCKRDARTSTGEPPASE 263
FH CVD WL RT CP+CK + + G PP ++
Sbjct: 299 FHKSCVDPWLLDHRT-CPMCKMNILKALGIPPNAD 332
>sp|Q06003|GOLI_DROME Protein goliath OS=Drosophila melanogaster GN=gol PE=2 SV=3
Length = 461
Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 89/229 (38%), Gaps = 42/229 (18%)
Query: 81 LTIRGGCSFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGNSAGIKIHAVFVSKASGEKL 140
L RG C+FE+KV++ + I+Y+++ L M I AV + G+ L
Sbjct: 144 LVRRGRCTFEEKVKHVYQQNAAGVIIYNDKQVMQLEKMQIKGKTRNIAAVITYQNIGQDL 203
Query: 141 -----KQYAGSTDM--------------------------------EIWIIPSFENSAWH 163
K Y + + +W+I +
Sbjct: 204 SLTLDKGYNVTISIIEGRRGVRTISSLNRTSVLFVSISFIVLMIISLVWLIFYY----IQ 259
Query: 164 RIRREAPRASRGREFHGMSRRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRIL 223
R R + + R ++++ + +P+ E + S CAIC+E Y + +RIL
Sbjct: 260 RFRYMQAKDQQSRNLCSVTKKAIMKIPTKTGKFSDEKDLDSDCCAICIEAYKPTDTIRIL 319
Query: 224 PCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTGEPPASESTPLLSSSP 272
PC+H+FH C+D WL RT CP+CK D G +L P
Sbjct: 320 PCKHEFHKNCIDPWLIEHRT-CPMCKLDVLKFYGYVFLGSEESILEYQP 367
>sp|Q8NC42|RN149_HUMAN E3 ubiquitin-protein ligase RNF149 OS=Homo sapiens GN=RNF149 PE=2
SV=2
Length = 400
Score = 75.1 bits (183), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 98/229 (42%), Gaps = 39/229 (17%)
Query: 81 LTIRGGCSFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGNSAGIKIHAVFVSKASGEKL 140
L RGGC+F+DKV A + A ++Y+ E G + ++ I + +S G ++
Sbjct: 112 LVARGGCTFKDKVLVAARRNASAVVLYNEERYGNITLPMSHAGTGNIVVIMISYPKGREI 171
Query: 141 KQYA------------GSTDMEIWI----------------IPSFENSAWHRIRREAPRA 172
+ G+ ++ +I I S ++ I+R
Sbjct: 172 LELVQKGIPVTMTIGVGTRHVQEFISGQSVVFVAIAFITMMIISLAWLIFYYIQRFLYTG 231
Query: 173 SR-GREFHGMSRRLVKAMPSLIFTAVVED----NCTSRTCAICLEDYSVGEKLRILPCRH 227
S+ G + H + K + L+ V + + CA+C+E++ V + +RILPC+H
Sbjct: 232 SQIGSQSH--RKETKKVIGQLLLHTVKHGEKGIDVDAENCAVCIENFKVKDIIRILPCKH 289
Query: 228 KFHAFCVDSWLTSWRTFCPVCKRD---ARTSTGEPPASESTPLLSSSPA 273
FH C+D WL RT CP+CK D A GEP + P S P
Sbjct: 290 IFHRICIDPWLLDHRT-CPMCKLDVIKALGYWGEPGDVQEMPAPESPPG 337
>sp|Q6AY01|RN133_RAT E3 ubiquitin-protein ligase RNF133 OS=Rattus norvegicus GN=Rnf133
PE=2 SV=1
Length = 381
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 88/210 (41%), Gaps = 27/210 (12%)
Query: 74 NMSSAFVLTIRGGCSFEDKVRNAQKAGFEAAIVYDNEDDG-------------VLVAMAG 120
N L RGGC+F K++ A + G I+Y+ G ++V M G
Sbjct: 97 NKEPWIALIERGGCAFTQKIKVASENGARGVIIYNFPGTGNQVFPMSHQAFEDIVVVMIG 156
Query: 121 NSAGIKI-HA------VFVSKASGEKLKQYAGSTDMEIWII--PSFENSAWHRIRREAPR 171
N G++I H V V G K + + I+ + ++ IRR
Sbjct: 157 NVKGMEILHLIRKGVHVTVMVEVGRKHVIWLNHYFVSFMIVTTATLAYFTFYHIRRLWVA 216
Query: 172 ASRGREFHGMSRRLVKAMPSLIFTAVVEDNC----TSRTCAICLEDYSVGEKLRILPCRH 227
R + ++R L KA L + E + + +C IC E Y E +RIL C+H
Sbjct: 217 RIEDRRWKRLTRELKKAFGQLQVRILKEGDEEVSPNADSCVICFEAYKPNEIVRILTCKH 276
Query: 228 KFHAFCVDSWLTSWRTFCPVCKRDARTSTG 257
FH C+D W+ + T CP+CK D + G
Sbjct: 277 FFHKNCIDPWILAHGT-CPMCKCDILKALG 305
>sp|Q86XS8|GOLI_HUMAN E3 ubiquitin-protein ligase RNF130 OS=Homo sapiens GN=RNF130 PE=1
SV=1
Length = 419
Score = 72.4 bits (176), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 90/219 (41%), Gaps = 34/219 (15%)
Query: 74 NMSSAFVLTIRGGCSFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGNSAGIKIHAVFVS 133
N+ L RG C+F++K+ A A ++Y+N+ V M G I AV ++
Sbjct: 100 NIKQWIALLQRGNCTFKEKISRAAFHNAVAVVIYNNKSKEEPVTMTHPGTG-DIIAVMIT 158
Query: 134 KASGEKLKQYAG---STDMEI----------------------WIIPSFENSAW------ 162
+ G+ + Y S M I +I+ +SAW
Sbjct: 159 ELRGKDILSYLEKNISVQMTIAVGTRMPPKNFSRGSLVFVSISFIVLMIISSAWLIFYFI 218
Query: 163 HRIRREAPRASRGREFHGMSRRLV-KAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLR 221
+IR R R +++ + K + E + CA+C+E Y + +R
Sbjct: 219 QKIRYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVR 278
Query: 222 ILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTGEPP 260
ILPC+H FH CVD WL+ T CP+CK + + G P
Sbjct: 279 ILPCKHVFHKSCVDPWLSEHCT-CPMCKLNILKALGIVP 316
>sp|Q6Y290|GOLI_RAT E3 ubiquitin-protein ligase RNF130 OS=Rattus norvegicus GN=Rnf130
PE=1 SV=1
Length = 419
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 90/219 (41%), Gaps = 34/219 (15%)
Query: 74 NMSSAFVLTIRGGCSFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGNSAGIKIHAVFVS 133
N+ L RG C+F++K+ A A ++Y+N+ V M G I AV ++
Sbjct: 100 NIKQWIALLQRGNCTFKEKISRAAFHNAVAVVIYNNKSKEEPVTMTHPGTG-DIIAVMIT 158
Query: 134 KASGEKLKQYAG---STDMEI----------------------WIIPSFENSAW------ 162
+ G+ + Y S M I +I+ +SAW
Sbjct: 159 ELRGKDILSYLEKNISVQMTIAVGTRMPPKNFSRGSLVFVSISFIVLMIISSAWLIFYFI 218
Query: 163 HRIRREAPRASRGREFHGMSRRLV-KAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLR 221
+IR R R +++ + K + E + CA+C+E Y + +R
Sbjct: 219 QKIRYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVR 278
Query: 222 ILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTGEPP 260
+LPC+H FH CVD WL+ T CP+CK + + G P
Sbjct: 279 VLPCKHVFHKSCVDPWLSEHCT-CPMCKLNILKALGIVP 316
>sp|Q8VEM1|GOLI_MOUSE E3 ubiquitin-protein ligase RNF130 OS=Mus musculus GN=Rnf130 PE=2
SV=1
Length = 419
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 90/219 (41%), Gaps = 34/219 (15%)
Query: 74 NMSSAFVLTIRGGCSFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMAGNSAGIKIHAVFVS 133
N+ L RG C+F++K+ A A ++Y+N+ V M G I AV ++
Sbjct: 100 NIKQWIALLQRGNCTFKEKISRAAFHNAVAVVIYNNKSKEEPVTMTHPGTG-DIIAVMIT 158
Query: 134 KASGEKLKQYAG---STDMEI----------------------WIIPSFENSAW------ 162
+ G+ + Y S M I +I+ +SAW
Sbjct: 159 ELRGKDILSYLEKNISVQMTIAVGTRMPPKNFSRGSLVFVSISFIVLMIISSAWLIFYFI 218
Query: 163 HRIRREAPRASRGREFHGMSRRLV-KAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLR 221
+IR R R +++ + K + E + CA+C+E Y + +R
Sbjct: 219 QKIRYTNARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVR 278
Query: 222 ILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTGEPP 260
+LPC+H FH CVD WL+ T CP+CK + + G P
Sbjct: 279 VLPCKHVFHKSCVDPWLSEHCT-CPMCKLNILKALGIVP 316
>sp|Q6NRX0|RN149_XENLA E3 ubiquitin-protein ligase RNF149 OS=Xenopus laevis GN=rnf149 PE=2
SV=1
Length = 397
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 86/208 (41%), Gaps = 32/208 (15%)
Query: 81 LTIRGGCSFEDKVRNAQKAGFEAAIVYDNEDDG-------------VLVAMAGNSAGIKI 127
L RGGC+F++KV NA G A ++Y+ G +V M G++I
Sbjct: 107 LVARGGCTFKEKVFNAANRGASAVVIYNEAKSGNATVSMSHLGTGNTVVIMVSYPKGMEI 166
Query: 128 HA-------VFVSKASGEKLKQYAGSTDMEIWIIPSFENS-----AWHRIRREAPRASRG 175
V + G + Q S +++ +F AW G
Sbjct: 167 MEPLRRDIPVKMVITVGTRHVQEFISGQSVVFVAIAFITMMIISLAWLIFYYIQRFLYTG 226
Query: 176 REFHGMSRR--LVKAMPSLIFTAVVED----NCTSRTCAICLEDYSVGEKLRILPCRHKF 229
+ S R KA+ L V + + + CA+C+E+Y + +RILPC+H F
Sbjct: 227 AQCGNQSNRKETKKAISQLQLHRVKKGEKGIDIDAENCAVCIENYKTKDLVRILPCKHIF 286
Query: 230 HAFCVDSWLTSWRTFCPVCKRDARTSTG 257
H C+D WL RT CP+CK D + G
Sbjct: 287 HRLCIDPWLIEHRT-CPMCKLDVIKALG 313
>sp|G3X9R7|RN148_MOUSE RING finger protein 148 OS=Mus musculus GN=Rnf148 PE=2 SV=1
Length = 316
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 105/256 (41%), Gaps = 33/256 (12%)
Query: 25 IGNNVT--LSFDDIEANFAPAIRGSGDCGVLYVAEPLDACSNLTSKVEKVSNMSSAFVLT 82
+GN + L + N +P R SG VL +ACS LT+ + + L
Sbjct: 61 VGNRIISELGESGVFGNHSPLERVSGAV-VLPEGWNQNACSPLTN-FSRPDQTDTWLALI 118
Query: 83 IRGGCSFEDKVRNAQKAGFEAAIVYDNEDDG-------------VLVAMAGNSAGIKI-- 127
RGGC+F K+ A + G I+Y+ G ++ M GN G+++
Sbjct: 119 ERGGCTFTHKINLAAEKGANGVIIYNYPGTGNKVFPMSHQGTENIVAVMIGNLKGMELLH 178
Query: 128 ---HAVFVS------KASGEKLKQYAGS--TDMEIWIIPSFENSAWHRIRREAPRASRGR 176
V+V+ + L Y S T + + F AW R R R R
Sbjct: 179 LIQQGVYVTIIIEVGRMHMPWLSHYVMSLFTFLAATVTYLFLYCAW-RPRVSNSSTRRQR 237
Query: 177 EFHGMSRRLVKAMPSLIFT-AVVEDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVD 235
+ ++ + + + E + +C +C + Y + +RIL C+H FH C+D
Sbjct: 238 QLKADVKKAIGQLQLRVLQDGDKELDPNEDSCVVCFDMYKAQDVIRILTCKHFFHKTCID 297
Query: 236 SWLTSWRTFCPVCKRD 251
WL + RT CP+CK D
Sbjct: 298 PWLLAHRT-CPMCKCD 312
>sp|Q95K04|RN133_MACFA E3 ubiquitin-protein ligase RNF133 OS=Macaca fascicularis GN=RNF133
PE=2 SV=1
Length = 376
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 105/268 (39%), Gaps = 38/268 (14%)
Query: 81 LTIRGGCSFEDKVRNAQKAGFEAAIVYDNEDDG-------------VLVAMAGNSAGIKI 127
L RGGC+F K++ A + G I+Y+ G V+V M GN G +I
Sbjct: 104 LIERGGCTFTQKIKVAAEKGASGVIIYNFPGTGNQVFPMFHQAFEDVVVVMIGNLKGTEI 163
Query: 128 -----HAVFVSKAS--GEKLKQYAGSTDMEIWIIPS--FENSAWHRIRREAPRASRGREF 178
V ++ G K + + I+ + ++ I R + R +
Sbjct: 164 FHLIKKGVLITAMVEVGRKHIIWMNHYLVSFVIVTTATLAYFIFYHIHRLCLARIQNRRW 223
Query: 179 HGMSRRLVKAMPSLIFTAVVED----NCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCV 234
++ L A L V E N +C IC E Y + +RIL C+H FH C+
Sbjct: 224 QRLTTDLQNAFGQLQLRVVKEGDEEINPNGDSCVICFEHYKPNDIVRILTCKHFFHKNCI 283
Query: 235 DSWLTSWRTFCPVCKRDARTSTGEPPASESTP-----LLSS------SPASSSILSSIRS 283
D W+ S T CP+CK D G E+ L+SS SP+ + +
Sbjct: 284 DPWILSHGT-CPICKCDILKVLGIQVDVENGTEPLQVLMSSELCETLSPSEEETNNEVSP 342
Query: 284 SLASSSALHIPPSMSHSPSVSHIHSVAS 311
+ S +H+ + + + S HSV
Sbjct: 343 AGTSDKVIHVEENPTSQNNDSQPHSVVE 370
>sp|Q566M8|RN150_DANRE RING finger protein 150 OS=Danio rerio GN=rnf150 PE=2 SV=1
Length = 419
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 97/219 (44%), Gaps = 40/219 (18%)
Query: 81 LTIRGGCSFEDKVRNAQKAGFEAAIVYD----NEDDGVLVAMAGNSAGIKIHAVFVSKAS 136
L RG C+++DK+R+A A ++++ N ++ + + G S + A+ + +
Sbjct: 108 LISRGNCTYKDKIRHAVGHNASAVVIFNVGSSNPNETITMPHQGIS---DVVAIMIPEPK 164
Query: 137 GEKL---------------------KQYAGSTDMEI----WIIPSFENSAW---HRIRRE 168
G +L ++Y T + +II + AW + I+R
Sbjct: 165 GRELVLLMERNITVHMHITIGTRNLQKYVSRTSVVFVSISFIILMIISLAWLVFYYIQRF 224
Query: 169 APRASRGREFHGMSRRLVKAMPSLIFTAVVEDNCTSRT----CAICLEDYSVGEKLRILP 224
+R R + KA+ L + + + + + CA+C+E Y + +RILP
Sbjct: 225 RYANARDRNQRRLGDAAKKAISQLQVRTIRKGDQETESDFDNCAVCIEGYKPNDVVRILP 284
Query: 225 CRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTGEPPASE 263
CRH FH CVD WL RT CP+CK + + G ++E
Sbjct: 285 CRHLFHKCCVDPWLVDHRT-CPMCKMNILKALGLTSSAE 322
>sp|Q8N7C7|RN148_HUMAN RING finger protein 148 OS=Homo sapiens GN=RNF148 PE=2 SV=2
Length = 305
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 107/265 (40%), Gaps = 49/265 (18%)
Query: 25 IGNNVT--LSFDDIEANFAPAIRGSGDCGVLYVAEP----LDACSNLTSKVEKVSNMSSA 78
+GN +T L + N +P R SG VA P +AC LT+ + S
Sbjct: 48 VGNEITSELGESGVFGNHSPLERVSG-----VVALPEGWNQNACHPLTN-FSRPKQADSW 101
Query: 79 FVLTIRGGCSFEDKVRNAQKAGFEAAIVYDNEDDG-------------VLVAMAGNSAGI 125
L RGGC+F K+ A + G I+Y+ + G ++ M N G+
Sbjct: 102 LALIERGGCTFTHKINVAAEKGANGVIIYNYQGTGSKVFPMSHQGTENIVAVMISNLKGM 161
Query: 126 KI-----HAVFVSK--ASGEKLKQYAGSTDMEIW------IIPSFENSAWHRIRREAPRA 172
+I V+V+ G Q+ M ++ I + + W R PR
Sbjct: 162 EILHSIQKGVYVTVIIEVGRMHMQWVSHYIMYLFTFLAATIAYFYLDCVW----RLTPRV 217
Query: 173 --SRGREFHGMSRRLVKAMPSLIFTAVVEDN----CTSRTCAICLEDYSVGEKLRILPCR 226
S R + + KA+ L + E + C +C + Y + +RIL C+
Sbjct: 218 PNSFTRRRSQIKTDVKKAIDQLQLRVLKEGDEELDLNEDNCVVCFDTYKPQDVVRILTCK 277
Query: 227 HKFHAFCVDSWLTSWRTFCPVCKRD 251
H FH C+D WL + RT CP+CK D
Sbjct: 278 HFFHKACIDPWLLAHRT-CPMCKCD 301
>sp|Q9D304|RN128_MOUSE E3 ubiquitin-protein ligase RNF128 OS=Mus musculus GN=Rnf128 PE=1
SV=1
Length = 428
Score = 68.9 bits (167), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 103/235 (43%), Gaps = 37/235 (15%)
Query: 59 LDAC---SNLTSKVEKVSNMSSAFVLTIR--GGCSFEDKVRNAQKAGFEAAIVYD----- 108
L+AC +N T S + +++ I+ GGC+F DK+ A + G A++++
Sbjct: 93 LNACNPHTNFTVPTVWGSTVQVSWLALIQRGGGCTFADKIHLASERGASGAVIFNFPGTR 152
Query: 109 NE-------DDGVLVA-MAGNSAGIKI-----------HAVFVSKASGEKLKQYA-GSTD 148
NE G +VA M GN G KI + V K G + Y+
Sbjct: 153 NEVIPMSHPGAGDIVAIMIGNLKGTKILQSIQRGIQVTMVIEVGKKHGPWVNHYSIFFVS 212
Query: 149 MEIWIIPS-----FENSAWHRIRREAPRASRGREFHGMSRRLV-KAMPSLIFTAVVEDNC 202
+ +II + F + R+R ++ + R+ +++ + K + E
Sbjct: 213 VSFFIITAATVGYFIFYSARRLRNARAQSRKQRQLKADAKKAIGKLQLRTLKQGDKEIGP 272
Query: 203 TSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTG 257
+CA+C+E Y + +RIL C H FH CVD WL RT CP+CK D + G
Sbjct: 273 DGDSCAVCIELYKPNDLVRILTCNHIFHKTCVDPWLLEHRT-CPMCKCDILKALG 326
>sp|Q08CG8|RNF44_DANRE RING finger protein 44 OS=Danio rerio GN=rnf44 PE=2 SV=1
Length = 448
Score = 68.9 bits (167), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 49/74 (66%), Gaps = 4/74 (5%)
Query: 180 GMSRRLVKAMPSLIFTAVVEDNCTSRT-CAICLEDYSVGEKLRILPCRHKFHAFCVDSWL 238
G+++ ++ +PS F +E++ + +T C +C D+ + LR+LPC H+FHA CVD WL
Sbjct: 370 GLTKADIEQLPSYRFN--LENHQSEQTLCVVCFSDFESRQLLRVLPCNHEFHAKCVDKWL 427
Query: 239 TSWRTFCPVCKRDA 252
+ RT CP+C+ DA
Sbjct: 428 KTNRT-CPICRADA 440
>sp|P87139|YDM9_SCHPO Uncharacterized RING finger protein C57A7.09 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC57A7.09 PE=1 SV=1
Length = 372
Score = 68.6 bits (166), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 90/219 (41%), Gaps = 49/219 (22%)
Query: 79 FVLTIRGGCSFEDKVRNAQKAGFEAAIVYDNEDDG------VLVAMAGNSAGIKIHAVFV 132
F+L RG C++ DK AQ+ GF+ IV DN ++ + + + I ++FV
Sbjct: 144 FLLVQRGKCTYFDKALEAQRLGFKGVIVGDNRSPSSFRLHYMVAPDKVDESKVHIPSLFV 203
Query: 133 SKAS------------GEKLKQYAGSTDM--EIW-IIPSFENSAWHRIRREA---PRASR 174
S +S + LK YA ++ W + F S I +A + R
Sbjct: 204 STSSYNLLWSDLLHSYRQPLKLYAKPEELGDMFWPFLLCFSPSIIMLITVQALAIRKFIR 263
Query: 175 GREFHGMSRRLVKAMPSLIFT--------------------AVVEDNCTSRT-----CAI 209
+RR ++ +PS + + D T R C I
Sbjct: 264 TYRTKSKTRRFIEDLPSRTISREGFYSEEEEIENSTQNGELVPLMDESTRRATFGVECVI 323
Query: 210 CLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVC 248
CLE ++ G+K+ LPC+H+FH C+ W+ +R CP C
Sbjct: 324 CLESFTKGDKVVALPCKHEFHRPCIAKWIVDYRHACPTC 362
>sp|Q5RF74|RN128_PONAB E3 ubiquitin-protein ligase RNF128 OS=Pongo abelii GN=RNF128 PE=2
SV=1
Length = 428
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 111/258 (43%), Gaps = 37/258 (14%)
Query: 59 LDAC---SNLTSKVEKVSNMSSAFVLTIR--GGCSFEDKVRNAQKAGFEAAIVYD----- 108
L+AC +N T S + +++ I+ GGC+F DK+ A + G A++++
Sbjct: 93 LNACNPHTNFTVPTVWGSTVQVSWLALIQRGGGCTFADKIHLAYERGASGAVIFNFPGTR 152
Query: 109 NE-------DDGVLVA-MAGNSAGIKI-----------HAVFVSKASGEKLKQYA-GSTD 148
NE G +VA M GN G KI + V K G + Y+
Sbjct: 153 NEVIPMSHPGAGDIVAIMIGNLKGTKILQSIQRGIQVTMVIEVGKKHGPWVNHYSIFFVS 212
Query: 149 MEIWIIPS-----FENSAWHRIRREAPRASRGREFHGMSRRLVKAMP-SLIFTAVVEDNC 202
+ +II + F + R+R ++ + R+ +++ + + + E
Sbjct: 213 VSFFIITAATVGYFIFYSARRLRNARAQSRKQRQLKADAKKAIGRLQLRTLKQGDREIGP 272
Query: 203 TSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTGEPPAS 262
+CA+C+E Y + +RIL C H FH CVD WL RT CP+CK D + G
Sbjct: 273 DGDSCAVCIELYKPNDLVRILTCNHIFHKTCVDPWLLEHRT-CPMCKCDILKALGIEVDV 331
Query: 263 ESTPLLSSSPASSSILSS 280
E + P S+ I +S
Sbjct: 332 EDGSVSLQVPVSNEISNS 349
>sp|Q9LT17|BBR_ARATH E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana
GN=BBR PE=2 SV=1
Length = 340
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 175 GREFHGMSRRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCV 234
G E G+S + ++PS + N T+ +C IC DY E L +LPC+H +H+ C+
Sbjct: 256 GTESRGLSADTIASLPSKRYKEGDNQNGTNESCVICRLDYEDDEDLILLPCKHSYHSECI 315
Query: 235 DSWLTSWRTFCPVCKRDARTST 256
++WL CPVC + TST
Sbjct: 316 NNWL-KINKVCPVCSAEVSTST 336
>sp|Q4V7B8|RNF44_RAT RING finger protein 44 OS=Rattus norvegicus GN=Rnf44 PE=2 SV=1
Length = 350
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 4/74 (5%)
Query: 180 GMSRRLVKAMPSLIFTAVVEDNCTSRT-CAICLEDYSVGEKLRILPCRHKFHAFCVDSWL 238
G+++ ++ +PS F + + + +T C +C D+ V + LR+LPC H+FHA CVD WL
Sbjct: 272 GLTKADIEQLPSYRFNP--DSHQSEQTLCVVCFSDFEVRQLLRVLPCNHEFHAKCVDKWL 329
Query: 239 TSWRTFCPVCKRDA 252
+ RT CP+C+ DA
Sbjct: 330 KANRT-CPICRADA 342
>sp|Q8AWW4|RN128_XENLA E3 ubiquitin-protein ligase RNF128 OS=Xenopus laevis GN=rnf128 PE=2
SV=2
Length = 404
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 100/262 (38%), Gaps = 64/262 (24%)
Query: 85 GGCSFEDKVRNAQKAGFEAAIVYDNEDDG------------VLVAMAGNSAGIKI----- 127
GGC+F +K+ A + G A +VY+N D + M GN G +I
Sbjct: 108 GGCTFTEKINRAAERGARAVVVYNNGIDNEVFEMSHPGTKDTVAIMIGNLKGNEIVDLIK 167
Query: 128 ------HAVFVSKASGEKLKQY-------------AGSTDMEI------WIIPSFENSAW 162
+ V + G + Y A + I W + +N
Sbjct: 168 GGMQVTMVIEVGRKHGSWINHYSIFFVSVSFFIVTAATVGYFIFYSARRWRLTRAQNKKQ 227
Query: 163 HRIRREAPRASRGREFHGMSRRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRI 222
R++ EA +A + R +K ++ +CA+C+E Y + +RI
Sbjct: 228 KRLKAEAKKA-----IGKLQLRTIKQGDKVL-------GPDGDSCAVCIEPYKPSDVVRI 275
Query: 223 LPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTGEPPASESTPLLSSSPASSSILSSIR 282
L C H FH C+D WL RT CP+CK D S G E +S + S+
Sbjct: 276 LTCNHFFHKNCIDPWLLEHRT-CPMCKCDILKSLGIAEDEEE--------GTSVAIPSVS 326
Query: 283 SSLASSSALHIPPSMSHSPSVS 304
S L S+ + I +HS + S
Sbjct: 327 SELQRST-VQITEEENHSETAS 347
>sp|Q8WWF5|ZNRF4_HUMAN Zinc/RING finger protein 4 OS=Homo sapiens GN=ZNRF4 PE=2 SV=3
Length = 429
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 77/148 (52%), Gaps = 8/148 (5%)
Query: 3 LSVVYLLCVLLICRLASANVVLIGNNVTLSFDDIEANFAPAIRGSGDCGVLYVAEPLDAC 62
+ + +L +L + A VL N+ ++ F D+ A F + G G L +P +AC
Sbjct: 83 VKALLVLSLLQVPAQAVVRAVLEDNSSSVDFADLPALFGVPLAPEGIRGYLMEVKPANAC 142
Query: 63 SNLTSKVEKVSNMS-SAFVLTIRGGCSFEDKVRNAQKAGFEAAIVYDNEDDGVLVAMA-- 119
+ + ++ N S A VL R C+F+ KV NAQ+AGFEAAIV++ D LV+M
Sbjct: 143 HPI--EAPRLGNRSLGAIVLIRRYDCTFDLKVLNAQRAGFEAAIVHNVHSDD-LVSMTHV 199
Query: 120 --GNSAGIKIHAVFVSKASGEKLKQYAG 145
I I +VFVS+A+ + L+ G
Sbjct: 200 YEDLRGQIAIPSVFVSEAASQDLRVILG 227
Score = 58.9 bits (141), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Query: 207 CAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSW-RTFCPVCKR 250
CAICL++Y G++L+ILPC H +H C+D W + R CPVCK+
Sbjct: 309 CAICLDEYEEGDQLKILPCSHTYHCKCIDPWFSQAPRRSCPVCKQ 353
>sp|Q3UHJ8|RNF44_MOUSE RING finger protein 44 OS=Mus musculus GN=Rnf44 PE=2 SV=1
Length = 407
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 4/74 (5%)
Query: 180 GMSRRLVKAMPSLIFTAVVEDNCTSRT-CAICLEDYSVGEKLRILPCRHKFHAFCVDSWL 238
G+++ ++ +PS F + + + +T C +C D+ V + LR+LPC H+FHA CVD WL
Sbjct: 329 GLTKADIEQLPSYRFNP--DSHQSEQTLCVVCFSDFEVRQLLRVLPCNHEFHAKCVDKWL 386
Query: 239 TSWRTFCPVCKRDA 252
+ RT CP+C+ DA
Sbjct: 387 KANRT-CPICRADA 399
>sp|Q07G42|RNF12_XENTR E3 ubiquitin-protein ligase RNF12 OS=Xenopus tropicalis GN=rnf12
PE=2 SV=1
Length = 639
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 183 RRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWR 242
R L K + T +N +TC++C+ +Y+ G KLR LPC H++H C+D WL S
Sbjct: 561 RGLTKEQIDNLSTRNFGENDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWL-SEN 619
Query: 243 TFCPVCKR 250
+ CP+C+R
Sbjct: 620 STCPICRR 627
>sp|Q8TEB7|RN128_HUMAN E3 ubiquitin-protein ligase RNF128 OS=Homo sapiens GN=RNF128 PE=1
SV=1
Length = 428
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 109/258 (42%), Gaps = 37/258 (14%)
Query: 59 LDAC---SNLTSKVEKVSNMSSAFVLTIR--GGCSFEDKVRNAQKAGFEAAIVYD----- 108
L+AC +N T S + +++ I+ GGC+F DK+ A + G A++++
Sbjct: 93 LNACNPHTNFTVPTVWGSTVQVSWLALIQRGGGCTFADKIHLAYERGASGAVIFNFPGTR 152
Query: 109 NE--------DDGVLVAMAGNSAGIKI-----------HAVFVSKASGEKLKQYA-GSTD 148
NE ++ M GN G KI + V K G + Y+
Sbjct: 153 NEVIPMSHPGAVDIVAIMIGNLKGTKILQSIQRGIQVTMVIEVGKKHGPWVNHYSIFFVS 212
Query: 149 MEIWIIPS-----FENSAWHRIRREAPRASRGREFHGMSRRLVKAMP-SLIFTAVVEDNC 202
+ +II + F + R+R ++ + R+ +++ + + + E
Sbjct: 213 VSFFIITAATVGYFIFYSARRLRNARAQSRKQRQLKADAKKAIGRLQLRTLKQGDKEIGP 272
Query: 203 TSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTGEPPAS 262
+CA+C+E Y + +RIL C H FH CVD WL RT CP+CK D + G
Sbjct: 273 DGDSCAVCIELYKPNDLVRILTCNHIFHKTCVDPWLLEHRT-CPMCKCDILKALGIEVDV 331
Query: 263 ESTPLLSSSPASSSILSS 280
E + P S+ I +S
Sbjct: 332 EDGSVSLQVPVSNEISNS 349
>sp|Q641J8|RF12A_XENLA E3 ubiquitin-protein ligase RNF12-A OS=Xenopus laevis GN=rnf12-a
PE=1 SV=1
Length = 622
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 183 RRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWR 242
R L K + T +N +TC++C+ +Y+ G KLR LPC H++H C+D WL S
Sbjct: 544 RGLTKEQIDNLSTRNFGENDALKTCSVCITEYTEGNKLRKLPCSHEYHIHCIDRWL-SEN 602
Query: 243 TFCPVCKR 250
+ CP+C+R
Sbjct: 603 STCPICRR 610
>sp|Q7T037|RF12B_XENLA E3 ubiquitin-protein ligase RNF12-B OS=Xenopus laevis GN=rnf12-b
PE=2 SV=1
Length = 757
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 183 RRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWR 242
R L K + T +N +TC++C+ +Y+ G KLR LPC H++H C+D WL S
Sbjct: 679 RGLTKEQIDNLSTRNYGENDALKTCSVCITEYTEGNKLRKLPCSHEYHIHCIDRWL-SEN 737
Query: 243 TFCPVCKR 250
+ CP+C+R
Sbjct: 738 STCPICRR 745
>sp|Q9H0F5|RNF38_HUMAN RING finger protein 38 OS=Homo sapiens GN=RNF38 PE=1 SV=4
Length = 515
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 48/74 (64%), Gaps = 4/74 (5%)
Query: 180 GMSRRLVKAMPSLIFTAVVEDNCTSRT-CAICLEDYSVGEKLRILPCRHKFHAFCVDSWL 238
G+++ ++ +PS F ++ + +T C +C+ D+ + LR+LPC H+FHA CVD WL
Sbjct: 437 GLTKADIEQLPSYRFNP--NNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWL 494
Query: 239 TSWRTFCPVCKRDA 252
+ RT CP+C+ DA
Sbjct: 495 KANRT-CPICRADA 507
>sp|Q9M0R5|ATL36_ARATH Putative RING-H2 finger protein ATL36 OS=Arabidopsis thaliana
GN=ATL36 PE=3 SV=1
Length = 345
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 4/86 (4%)
Query: 176 REFHGMSRRLVKAMPSLIFTAV--VEDNCTSRTCAICLEDYSVGEKLRILP-CRHKFHAF 232
R G+ + ++++ P+ +++ V ++ CAICL ++ E LR +P C H FHA
Sbjct: 90 RARRGLEKEVIESFPTFLYSEVKGLKIGKGGVECAICLSEFEDQETLRWMPPCSHTFHAN 149
Query: 233 CVDSWLTSWRTFCPVCKRDARTSTGE 258
C+D WL+SW T CPVC+ + GE
Sbjct: 150 CIDVWLSSWST-CPVCRANLSLKPGE 174
>sp|Q8BI21|RNF38_MOUSE RING finger protein 38 OS=Mus musculus GN=Rnf38 PE=2 SV=1
Length = 518
Score = 65.5 bits (158), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 47/74 (63%), Gaps = 4/74 (5%)
Query: 180 GMSRRLVKAMPSLIFTAVVEDNCTSRT-CAICLEDYSVGEKLRILPCRHKFHAFCVDSWL 238
G+++ ++ +PS F ++ + +T C +C+ D+ + LR+LPC H+FHA CVD WL
Sbjct: 440 GLTKADIEQLPSYRFNP--SNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWL 497
Query: 239 TSWRTFCPVCKRDA 252
RT CP+C+ DA
Sbjct: 498 KGNRT-CPICRADA 510
>sp|Q9DBU5|RNF6_MOUSE E3 ubiquitin-protein ligase RNF6 OS=Mus musculus GN=Rnf6 PE=1 SV=1
Length = 667
Score = 65.5 bits (158), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 178 FHGMSRRLVKAMPSLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSW 237
G+++ + + + + D+ + C++C+ DY G KLR LPC H+FH C+D W
Sbjct: 585 IRGLTKEQIDNLSTRSYEQDGVDSELGKVCSVCISDYVAGNKLRQLPCLHEFHIHCIDRW 644
Query: 238 LTSWRTFCPVCKR 250
L S CPVC+R
Sbjct: 645 L-SENCTCPVCRR 656
>sp|Q9NVW2|RNF12_HUMAN E3 ubiquitin-protein ligase RLIM OS=Homo sapiens GN=RLIM PE=1 SV=3
Length = 624
Score = 65.5 bits (158), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 200 DNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKR 250
+N +TC++C+ +Y+ G KLR LPC H++H C+D WL+ T CP+C+R
Sbjct: 563 ENDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENST-CPICRR 612
>sp|Q9WTV7|RNF12_MOUSE E3 ubiquitin-protein ligase RLIM OS=Mus musculus GN=Rlim PE=1 SV=2
Length = 600
Score = 65.5 bits (158), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 200 DNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKR 250
+N +TC++C+ +Y+ G KLR LPC H++H C+D WL+ T CP+C+R
Sbjct: 539 ENDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENST-CPICRR 588
>sp|Q9SN28|ATL7_ARATH RING-H2 finger protein ATL7 OS=Arabidopsis thaliana GN=ATL7 PE=2
SV=1
Length = 236
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 69/133 (51%), Gaps = 19/133 (14%)
Query: 180 GMSRRLVKAMPSLIFTA--VVEDNCTSRTCAICLEDYSVGEKLRILP-CRHKFHAFCVDS 236
G+S+ + + +P +I+ +V+D+ C++CL DY EKL+ +P C H FH C+D
Sbjct: 86 GLSKDIREMLPVVIYKESFIVKDS----QCSVCLGDYQAEEKLQQMPSCGHTFHMECIDL 141
Query: 237 WLTSWRTFCPVCKRDARTSTGEPPASESTPLLSSSPASSSILSSIRSSLASSSALHIPPS 296
WLTS T CP+C+ P L S S+ I+SSI +S ++ P S
Sbjct: 142 WLTS-HTTCPLCRLSLIPK----------PSLDLSHQSTEIVSSIENSNGGEASTQ-PDS 189
Query: 297 MSHSPSVSHIHSV 309
S + ++SH V
Sbjct: 190 QSATEAISHTDDV 202
>sp|Q29RU0|RN128_BOVIN E3 ubiquitin-protein ligase RNF128 OS=Bos taurus GN=RNF128 PE=2
SV=1
Length = 431
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 88/204 (43%), Gaps = 32/204 (15%)
Query: 85 GGCSFEDKVRNAQKAGFEAAIVYD-----NE-------DDGVLVA-MAGNSAGIKI---- 127
GGC+F DK+ A + G A++++ NE G +VA M GN G KI
Sbjct: 127 GGCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHPGAGDIVAIMIGNLKGTKILQSI 186
Query: 128 -------HAVFVSKASGEKLKQYA-GSTDMEIWIIPS-----FENSAWHRIRREAPRASR 174
+ V K G + Y+ + +II + F + R+R ++ +
Sbjct: 187 QRGIQVTMVIEVGKKHGPWVNHYSIFFVSVSFFIITAATVGYFIFYSARRLRNARAQSRK 246
Query: 175 GREFHGMSRRLVKAMP-SLIFTAVVEDNCTSRTCAICLEDYSVGEKLRILPCRHKFHAFC 233
R+ +++ + + E +CA+C+E Y + +RIL C H FH C
Sbjct: 247 QRQLKADAKKAIGRLQLRTQKQGDKEIGPDGDSCAVCIELYKPNDLVRILTCNHVFHKTC 306
Query: 234 VDSWLTSWRTFCPVCKRDARTSTG 257
VD WL RT CP+CK D + G
Sbjct: 307 VDPWLLEHRT-CPMCKCDILKALG 329
>sp|Q7L0R7|RNF44_HUMAN RING finger protein 44 OS=Homo sapiens GN=RNF44 PE=2 SV=1
Length = 432
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 46/74 (62%), Gaps = 4/74 (5%)
Query: 180 GMSRRLVKAMPSLIFTAVVEDNCTSRT-CAICLEDYSVGEKLRILPCRHKFHAFCVDSWL 238
G+++ ++ +PS F + + + +T C +C D+ + LR+LPC H+FH CVD WL
Sbjct: 354 GLTKADIEQLPSYRFNP--DSHQSEQTLCVVCFSDFEARQLLRVLPCNHEFHTKCVDKWL 411
Query: 239 TSWRTFCPVCKRDA 252
+ RT CP+C+ DA
Sbjct: 412 KANRT-CPICRADA 424
>sp|O22755|ATL44_ARATH RING-H2 finger protein ATL44 OS=Arabidopsis thaliana GN=ATL44 PE=2
SV=1
Length = 185
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 8/79 (10%)
Query: 179 HGMSRRLVKAMPSLIFTAV------VEDNCTSRTCAICLEDYSVGEKLRILP-CRHKFHA 231
G+ ++ ++++P FTA + S CAICL D++ GE++R+LP C H FH
Sbjct: 68 KGLKKKALQSLPRSTFTAAESTSGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFHV 127
Query: 232 FCVDSWLTSWRTFCPVCKR 250
C+D WL S R+ CP C+R
Sbjct: 128 ECIDKWLVS-RSSCPSCRR 145
>sp|Q5SSZ7|ZNRF3_MOUSE E3 ubiquitin-protein ligase ZNRF3 OS=Mus musculus GN=Znrf3 PE=2
SV=1
Length = 913
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 207 CAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTGEPPA 261
CAICLE Y GE+LR++PC H+FH CVD WL T CP C+ + G P A
Sbjct: 290 CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHT-CPHCRHNIIEQKGNPGA 343
>sp|Q9ULT6|ZNRF3_HUMAN E3 ubiquitin-protein ligase ZNRF3 OS=Homo sapiens GN=ZNRF3 PE=1
SV=3
Length = 936
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 207 CAICLEDYSVGEKLRILPCRHKFHAFCVDSWLTSWRTFCPVCKRDARTSTGEPPA 261
CAICLE Y GE+LR++PC H+FH CVD WL T CP C+ + G P A
Sbjct: 293 CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHT-CPHCRHNIIEQKGNPSA 346
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.128 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 147,167,658
Number of Sequences: 539616
Number of extensions: 5880621
Number of successful extensions: 26685
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 231
Number of HSP's successfully gapped in prelim test: 643
Number of HSP's that attempted gapping in prelim test: 22946
Number of HSP's gapped (non-prelim): 2793
length of query: 419
length of database: 191,569,459
effective HSP length: 120
effective length of query: 299
effective length of database: 126,815,539
effective search space: 37917846161
effective search space used: 37917846161
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)