Query 014724
Match_columns 419
No_of_seqs 298 out of 2513
Neff 7.9
Searched_HMMs 46136
Date Fri Mar 29 07:54:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014724.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014724hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2467 Glycine/serine hydroxy 100.0 4.1E-89 8.9E-94 645.0 28.1 341 76-416 14-363 (477)
2 COG0112 GlyA Glycine/serine hy 100.0 9.3E-79 2E-83 584.4 32.0 321 81-415 5-325 (413)
3 PLN02271 serine hydroxymethylt 100.0 1.9E-72 4.1E-77 571.4 36.2 338 78-415 124-476 (586)
4 PF00464 SHMT: Serine hydroxym 100.0 1.2E-72 2.7E-77 560.2 27.9 333 83-415 1-341 (399)
5 PRK13580 serine hydroxymethylt 100.0 1.6E-58 3.6E-63 468.4 32.3 319 81-415 28-380 (493)
6 PLN03226 serine hydroxymethylt 100.0 3.6E-57 7.8E-62 465.2 34.6 339 77-415 9-355 (475)
7 PTZ00094 serine hydroxymethylt 100.0 1.5E-47 3.2E-52 394.1 35.2 334 79-415 11-344 (452)
8 PRK13034 serine hydroxymethylt 100.0 3.6E-45 7.7E-50 372.4 35.3 325 77-415 3-327 (416)
9 PRK00011 glyA serine hydroxyme 100.0 9.2E-41 2E-45 340.4 35.3 321 80-414 3-323 (416)
10 cd00378 SHMT Serine-glycine hy 100.0 1E-40 2.2E-45 338.4 35.3 318 85-414 2-319 (402)
11 COG0436 Aspartate/tyrosine/aro 100.0 4.5E-26 9.8E-31 230.0 28.0 286 103-414 29-334 (393)
12 COG1168 MalY Bifunctional PLP- 100.0 3.6E-26 7.9E-31 220.3 25.0 286 103-416 26-331 (388)
13 COG0520 csdA Selenocysteine ly 99.9 1.1E-24 2.5E-29 219.9 28.1 278 112-413 32-342 (405)
14 COG1104 NifS Cysteine sulfinat 99.9 2.5E-24 5.5E-29 211.2 22.3 257 110-393 9-279 (386)
15 PRK13238 tnaA tryptophanase/L- 99.9 3.7E-24 8E-29 220.2 24.3 277 102-414 36-355 (460)
16 cd06451 AGAT_like Alanine-glyo 99.9 1.6E-23 3.5E-28 208.8 28.0 261 105-399 1-284 (356)
17 KOG0257 Kynurenine aminotransf 99.9 1.2E-23 2.7E-28 204.7 26.0 306 80-412 9-344 (420)
18 COG0075 Serine-pyruvate aminot 99.9 1.8E-23 3.9E-28 206.5 27.2 266 104-399 6-290 (383)
19 PLN02409 serine--glyoxylate am 99.9 3.6E-23 7.9E-28 210.1 25.5 262 104-399 10-298 (401)
20 PRK10874 cysteine sulfinate de 99.9 8.7E-23 1.9E-27 207.1 27.5 282 104-413 20-335 (401)
21 cd06453 SufS_like Cysteine des 99.9 8.6E-23 1.9E-27 204.9 27.1 280 109-412 6-315 (373)
22 PLN00175 aminotransferase fami 99.9 2.8E-22 6E-27 204.4 30.6 305 79-413 32-351 (413)
23 TIGR01822 2am3keto_CoA 2-amino 99.9 1.1E-22 2.3E-27 205.7 26.0 274 102-411 38-328 (393)
24 TIGR01976 am_tr_V_VC1184 cyste 99.9 1.5E-22 3.2E-27 205.0 27.0 278 109-412 24-336 (397)
25 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 1.6E-22 3.5E-27 204.4 26.9 276 104-411 20-319 (387)
26 PLN02651 cysteine desulfurase 99.9 1.2E-22 2.7E-27 203.5 25.3 276 109-412 6-303 (364)
27 PF00266 Aminotran_5: Aminotra 99.9 2.5E-22 5.5E-27 201.7 27.5 282 108-413 5-318 (371)
28 TIGR03392 FeS_syn_CsdA cystein 99.9 3.2E-22 6.8E-27 202.9 27.2 280 105-412 18-331 (398)
29 TIGR01979 sufS cysteine desulf 99.9 5.5E-22 1.2E-26 201.3 28.0 283 105-413 20-338 (403)
30 PRK09295 bifunctional cysteine 99.9 4.9E-22 1.1E-26 202.1 27.4 281 105-412 25-340 (406)
31 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 4.5E-22 9.8E-27 200.0 26.8 278 102-412 6-307 (370)
32 COG0156 BioF 7-keto-8-aminopel 99.9 2.6E-22 5.6E-27 199.8 23.5 271 105-413 42-331 (388)
33 PRK12414 putative aminotransfe 99.9 1.2E-21 2.6E-26 197.9 28.8 301 82-413 10-326 (384)
34 PRK08960 hypothetical protein; 99.9 1.1E-21 2.3E-26 198.3 28.0 284 102-413 32-328 (387)
35 TIGR03235 DNA_S_dndA cysteine 99.9 6.4E-22 1.4E-26 197.4 24.5 264 109-399 5-286 (353)
36 PRK07366 succinyldiaminopimela 99.9 1.7E-21 3.8E-26 196.8 27.6 284 102-413 30-331 (388)
37 TIGR01977 am_tr_V_EF2568 cyste 99.9 1.7E-21 3.7E-26 195.6 26.8 280 113-412 11-312 (376)
38 TIGR03540 DapC_direct LL-diami 99.9 4.1E-21 8.9E-26 193.7 29.5 284 102-413 29-329 (383)
39 PLN03032 serine decarboxylase; 99.9 6.8E-21 1.5E-25 190.5 30.4 273 114-409 35-329 (374)
40 PRK02769 histidine decarboxyla 99.9 7.4E-21 1.6E-25 191.2 30.7 271 116-409 36-326 (380)
41 TIGR02326 transamin_PhnW 2-ami 99.9 2.9E-21 6.3E-26 193.4 27.3 261 104-399 4-289 (363)
42 PRK06290 aspartate aminotransf 99.9 5.1E-21 1.1E-25 194.9 29.4 296 88-413 24-342 (410)
43 PLN02855 Bifunctional selenocy 99.9 2.8E-21 6.2E-26 197.6 27.7 282 105-412 34-353 (424)
44 PRK02948 cysteine desulfurase; 99.9 1.2E-21 2.6E-26 197.4 24.3 264 109-399 7-282 (381)
45 PRK06108 aspartate aminotransf 99.9 3.1E-21 6.8E-26 194.2 27.0 282 102-413 24-325 (382)
46 PRK07179 hypothetical protein; 99.9 3E-21 6.6E-26 196.4 27.1 267 108-412 59-338 (407)
47 PRK07681 aspartate aminotransf 99.9 5.3E-21 1.1E-25 194.1 28.7 283 102-413 32-331 (399)
48 PRK07337 aminotransferase; Val 99.9 2.8E-21 6E-26 195.3 26.4 284 102-413 30-326 (388)
49 cd00615 Orn_deC_like Ornithine 99.9 2E-22 4.3E-27 196.4 16.8 223 153-392 64-294 (294)
50 PRK08068 transaminase; Reviewe 99.9 8.2E-21 1.8E-25 192.0 29.1 284 102-413 32-332 (389)
51 PRK09082 methionine aminotrans 99.9 3.2E-21 7E-26 194.8 25.9 304 80-413 9-328 (386)
52 PRK08912 hypothetical protein; 99.9 8.1E-21 1.8E-25 191.9 28.1 303 81-413 6-324 (387)
53 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 1.1E-20 2.5E-25 189.0 28.2 271 107-412 6-301 (361)
54 PRK09276 LL-diaminopimelate am 99.9 1.4E-20 3.1E-25 189.9 28.8 284 102-413 31-331 (385)
55 cd06454 KBL_like KBL_like; thi 99.9 5.3E-21 1.1E-25 189.8 24.8 251 115-399 17-279 (349)
56 PRK07777 aminotransferase; Val 99.9 1.5E-20 3.3E-25 189.9 28.4 303 81-413 4-324 (387)
57 PRK06939 2-amino-3-ketobutyrat 99.9 6.7E-21 1.4E-25 192.5 25.4 264 103-399 43-322 (397)
58 cd06502 TA_like Low-specificit 99.9 4.6E-21 9.9E-26 189.5 23.5 268 109-412 3-284 (338)
59 PRK05942 aspartate aminotransf 99.9 2.3E-20 4.9E-25 189.2 29.0 284 102-413 35-335 (394)
60 PRK13479 2-aminoethylphosphona 99.9 7.6E-21 1.7E-25 190.6 25.3 261 105-399 7-290 (368)
61 PRK06207 aspartate aminotransf 99.9 1.6E-20 3.4E-25 191.0 27.7 284 102-413 39-344 (405)
62 KOG1360 5-aminolevulinate synt 99.9 1.2E-21 2.6E-26 188.5 18.2 274 103-412 171-463 (570)
63 cd00617 Tnase_like Tryptophana 99.9 8E-21 1.7E-25 193.3 25.4 241 146-415 55-331 (431)
64 TIGR03402 FeS_nifS cysteine de 99.9 8.3E-21 1.8E-25 191.2 25.4 265 109-399 6-282 (379)
65 PRK07682 hypothetical protein; 99.9 1E-20 2.2E-25 190.5 25.7 283 102-413 20-318 (378)
66 TIGR00858 bioF 8-amino-7-oxono 99.9 1.2E-20 2.7E-25 187.6 26.0 274 102-412 16-305 (360)
67 PRK05957 aspartate aminotransf 99.9 4.4E-20 9.5E-25 186.8 30.2 305 80-413 5-327 (389)
68 TIGR02006 IscS cysteine desulf 99.9 5.6E-21 1.2E-25 194.1 23.6 263 109-399 10-289 (402)
69 COG0399 WecE Predicted pyridox 99.9 1E-20 2.2E-25 187.2 24.5 259 114-413 13-293 (374)
70 PRK07309 aromatic amino acid a 99.9 3.2E-20 7E-25 187.9 28.4 306 80-413 8-329 (391)
71 PRK08361 aspartate aminotransf 99.9 1.9E-20 4.2E-25 189.4 26.7 305 80-413 11-332 (391)
72 PRK06348 aspartate aminotransf 99.9 3.2E-20 7E-25 187.4 27.4 306 77-412 4-326 (384)
73 PRK13237 tyrosine phenol-lyase 99.9 1.8E-20 3.9E-25 189.0 24.2 248 140-416 74-357 (460)
74 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 7.9E-20 1.7E-24 181.7 28.4 272 106-412 2-299 (355)
75 PLN00145 tyrosine/nicotianamin 99.9 4.9E-20 1.1E-24 188.8 27.4 288 103-412 53-363 (430)
76 PRK11658 UDP-4-amino-4-deoxy-L 99.9 2.9E-20 6.3E-25 187.5 25.0 244 114-396 12-277 (379)
77 TIGR03403 nifS_epsilon cystein 99.9 4.6E-20 9.9E-25 186.0 26.4 277 109-412 6-300 (382)
78 PRK13520 L-tyrosine decarboxyl 99.9 7.1E-20 1.5E-24 183.4 27.6 296 87-412 4-320 (371)
79 PLN02656 tyrosine transaminase 99.9 3.8E-20 8.3E-25 188.5 25.8 289 102-412 31-342 (409)
80 PRK08636 aspartate aminotransf 99.9 1E-19 2.3E-24 184.9 28.4 285 102-413 33-340 (403)
81 PRK13355 bifunctional HTH-doma 99.9 4.4E-20 9.6E-25 193.4 26.3 306 79-413 119-453 (517)
82 PLN03227 serine palmitoyltrans 99.9 4.1E-20 8.9E-25 187.1 24.9 270 109-413 4-310 (392)
83 PRK05958 8-amino-7-oxononanoat 99.9 8.9E-20 1.9E-24 183.4 27.1 275 102-412 39-327 (385)
84 PLN02187 rooty/superroot1 99.9 7.3E-20 1.6E-24 189.0 26.8 290 102-412 66-377 (462)
85 PLN02483 serine palmitoyltrans 99.9 5.4E-20 1.2E-24 191.0 25.4 273 103-410 101-404 (489)
86 PRK10534 L-threonine aldolase; 99.9 3.7E-20 8.1E-25 183.1 22.9 271 105-412 2-283 (333)
87 PRK05764 aspartate aminotransf 99.9 1.6E-19 3.5E-24 182.6 27.4 304 80-413 5-331 (393)
88 PRK07550 hypothetical protein; 99.9 3E-19 6.6E-24 180.4 28.9 281 103-413 30-328 (386)
89 PRK09148 aminotransferase; Val 99.9 2.5E-19 5.5E-24 182.2 28.3 284 102-413 30-330 (405)
90 PLN02368 alanine transaminase 99.9 9.4E-20 2E-24 185.1 25.0 244 147-412 110-396 (407)
91 PRK06855 aminotransferase; Val 99.9 1.5E-19 3.3E-24 185.4 26.7 289 103-413 33-345 (433)
92 PRK06225 aspartate aminotransf 99.9 2.3E-19 5E-24 180.9 27.4 294 85-413 8-318 (380)
93 PRK07683 aminotransferase A; V 99.9 2.2E-19 4.7E-24 181.6 27.1 283 102-413 28-325 (387)
94 TIGR03537 DapC succinyldiamino 99.9 2.2E-19 4.9E-24 179.0 26.9 269 114-413 14-297 (350)
95 PRK09147 succinyldiaminopimela 99.9 2.4E-19 5.3E-24 181.7 27.5 279 102-412 29-334 (396)
96 TIGR02618 tyr_phenol_ly tyrosi 99.9 3.1E-20 6.7E-25 186.9 20.5 248 140-416 67-350 (450)
97 TIGR01437 selA_rel uncharacter 99.9 1.4E-19 3.1E-24 181.4 25.1 245 110-398 21-288 (363)
98 PRK09064 5-aminolevulinate syn 99.9 1.7E-19 3.7E-24 183.4 25.9 269 107-412 50-336 (407)
99 PRK14807 histidinol-phosphate 99.9 1.7E-19 3.7E-24 180.0 25.4 267 104-412 24-300 (351)
100 KOG1549 Cysteine desulfurase N 99.9 3.5E-20 7.7E-25 182.7 19.7 203 103-328 43-257 (428)
101 PRK14012 cysteine desulfurase; 99.9 1E-19 2.2E-24 185.0 23.7 262 109-398 10-290 (404)
102 PRK13392 5-aminolevulinate syn 99.9 9E-20 1.9E-24 185.8 23.4 267 108-411 51-335 (410)
103 TIGR01821 5aminolev_synth 5-am 99.9 1.5E-19 3.2E-24 183.7 24.8 268 107-411 49-334 (402)
104 cd00613 GDC-P Glycine cleavage 99.9 4.8E-19 1E-23 179.3 28.1 244 147-413 63-347 (398)
105 PLN03026 histidinol-phosphate 99.9 1.1E-19 2.4E-24 183.3 23.3 267 102-412 52-328 (380)
106 TIGR03576 pyridox_MJ0158 pyrid 99.9 3.8E-19 8.2E-24 177.1 26.7 249 115-413 35-289 (346)
107 TIGR01825 gly_Cac_T_rel pyrido 99.9 2.4E-19 5.2E-24 180.7 25.6 274 102-411 33-320 (385)
108 PTZ00433 tyrosine aminotransfe 99.8 2E-19 4.3E-24 183.3 25.2 286 102-412 33-347 (412)
109 PRK08363 alanine aminotransfer 99.8 6.1E-19 1.3E-23 178.9 28.4 282 103-413 31-335 (398)
110 cd00616 AHBA_syn 3-amino-5-hyd 99.8 1.5E-19 3.4E-24 179.6 23.5 235 146-412 20-275 (352)
111 KOG2862 Alanine-glyoxylate ami 99.8 1.3E-19 2.9E-24 169.8 21.3 261 105-399 19-307 (385)
112 PLN02376 1-aminocyclopropane-1 99.8 9.8E-20 2.1E-24 189.3 22.8 285 103-414 47-374 (496)
113 PRK07324 transaminase; Validat 99.8 2.2E-19 4.8E-24 180.7 24.2 261 103-399 27-302 (373)
114 PLN00143 tyrosine/nicotianamin 99.8 3.2E-19 7E-24 181.7 25.6 290 102-413 32-344 (409)
115 TIGR03588 PseC UDP-4-keto-6-de 99.8 2E-19 4.4E-24 181.4 23.5 246 114-397 8-283 (380)
116 PRK01533 histidinol-phosphate 99.8 3.1E-20 6.6E-25 186.5 17.3 265 102-412 29-309 (366)
117 PRK06107 aspartate aminotransf 99.8 6.2E-19 1.3E-23 179.1 27.1 281 102-412 33-333 (402)
118 PF01041 DegT_DnrJ_EryC1: DegT 99.8 1.4E-19 3.1E-24 181.5 22.1 245 115-398 4-266 (363)
119 PLN02231 alanine transaminase 99.8 4.4E-19 9.6E-24 185.7 26.3 284 102-412 129-456 (534)
120 TIGR01264 tyr_amTase_E tyrosin 99.8 1.1E-18 2.4E-23 177.1 28.5 302 85-413 12-339 (401)
121 PRK08175 aminotransferase; Val 99.8 1.1E-18 2.3E-23 177.0 28.3 283 102-413 29-329 (395)
122 TIGR03538 DapC_gpp succinyldia 99.8 5.2E-19 1.1E-23 179.1 25.9 280 102-412 28-333 (393)
123 TIGR01265 tyr_nico_aTase tyros 99.8 1.8E-18 4E-23 175.7 29.5 289 102-413 31-341 (403)
124 PRK08861 cystathionine gamma-s 99.8 1.7E-19 3.7E-24 181.8 21.3 213 142-393 51-270 (388)
125 PLN02822 serine palmitoyltrans 99.8 6.4E-19 1.4E-23 182.7 26.0 275 102-413 109-407 (481)
126 PRK03317 histidinol-phosphate 99.8 4E-19 8.6E-24 178.4 23.7 274 104-411 28-315 (368)
127 COG0079 HisC Histidinol-phosph 99.8 4E-19 8.8E-24 176.8 23.4 266 103-413 23-301 (356)
128 TIGR03812 tyr_de_CO2_Arch tyro 99.8 1.5E-18 3.3E-23 174.0 27.7 268 114-411 32-324 (373)
129 PLN02450 1-aminocyclopropane-1 99.8 3.1E-19 6.8E-24 184.6 23.2 281 103-413 39-366 (468)
130 TIGR01328 met_gam_lyase methio 99.8 1.9E-19 4.2E-24 182.1 21.1 218 142-396 57-281 (391)
131 PRK04870 histidinol-phosphate 99.8 3.4E-19 7.3E-24 178.1 22.5 271 102-412 26-305 (356)
132 TIGR01814 kynureninase kynuren 99.8 5.4E-19 1.2E-23 179.8 24.1 286 104-412 28-355 (406)
133 PRK05387 histidinol-phosphate 99.8 3.6E-19 7.7E-24 177.5 21.8 267 103-413 25-301 (353)
134 PRK07811 cystathionine gamma-s 99.8 3E-19 6.6E-24 180.5 21.3 214 144-396 61-282 (388)
135 PLN02955 8-amino-7-oxononanoat 99.8 3.4E-19 7.4E-24 181.5 21.6 267 105-412 104-401 (476)
136 PLN02242 methionine gamma-lyas 99.8 2.4E-19 5.1E-24 182.7 20.5 223 142-400 74-304 (418)
137 PRK09105 putative aminotransfe 99.8 7.9E-19 1.7E-23 176.5 23.4 263 102-412 43-319 (370)
138 TIGR01141 hisC histidinol-phos 99.8 5.3E-19 1.2E-23 175.7 22.0 268 103-413 20-299 (346)
139 PRK13393 5-aminolevulinate syn 99.8 1.5E-18 3.2E-23 176.7 25.4 268 107-411 49-334 (406)
140 PRK15481 transcriptional regul 99.8 1.2E-18 2.5E-23 178.7 24.7 274 104-413 87-375 (431)
141 PLN02721 threonine aldolase 99.8 2.2E-18 4.7E-23 171.4 25.8 272 104-413 7-298 (353)
142 PTZ00377 alanine aminotransfer 99.8 2.1E-18 4.5E-23 179.3 26.7 280 105-412 80-404 (481)
143 TIGR01788 Glu-decarb-GAD gluta 99.8 2.4E-18 5.2E-23 175.4 26.4 280 111-413 50-366 (431)
144 PRK08153 histidinol-phosphate 99.8 1.2E-18 2.5E-23 175.2 23.8 265 104-412 34-310 (369)
145 PRK07590 L,L-diaminopimelate a 99.8 2.5E-18 5.5E-23 175.0 26.2 279 102-413 34-354 (409)
146 PLN02672 methionine S-methyltr 99.8 8.8E-19 1.9E-23 192.4 23.8 280 102-412 697-1007(1082)
147 PRK02610 histidinol-phosphate 99.8 8.2E-19 1.8E-23 176.6 21.8 274 104-413 30-323 (374)
148 PRK08776 cystathionine gamma-s 99.8 1.1E-18 2.3E-23 177.3 22.5 213 142-393 58-277 (405)
149 PRK08133 O-succinylhomoserine 99.8 6.5E-19 1.4E-23 178.2 20.7 243 111-396 32-281 (390)
150 PRK05968 hypothetical protein; 99.8 6.7E-19 1.4E-23 178.1 20.8 231 143-412 62-310 (389)
151 PRK08574 cystathionine gamma-s 99.8 7.7E-19 1.7E-23 177.3 20.9 212 142-393 51-269 (385)
152 PRK09265 aminotransferase AlaT 99.8 8.3E-18 1.8E-22 171.0 28.5 283 102-413 33-340 (404)
153 PRK07504 O-succinylhomoserine 99.8 6.2E-19 1.3E-23 178.8 20.2 215 143-395 64-285 (398)
154 PRK06767 methionine gamma-lyas 99.8 5.3E-19 1.2E-23 178.7 19.1 218 142-397 59-283 (386)
155 PRK02731 histidinol-phosphate 99.8 2.2E-18 4.8E-23 172.7 23.1 266 102-412 32-312 (367)
156 PRK03158 histidinol-phosphate 99.8 1.1E-18 2.4E-23 174.4 20.8 266 103-412 30-309 (359)
157 PRK08045 cystathionine gamma-s 99.8 1.4E-18 3E-23 175.4 21.4 212 143-394 51-270 (386)
158 TIGR01325 O_suc_HS_sulf O-succ 99.8 2.1E-18 4.6E-23 173.9 22.3 213 143-394 53-271 (380)
159 PF00155 Aminotran_1_2: Aminot 99.8 2.3E-18 5E-23 172.0 22.4 283 103-413 2-314 (363)
160 PRK07568 aspartate aminotransf 99.8 1.7E-17 3.8E-22 168.0 28.8 276 103-412 31-327 (397)
161 PRK05166 histidinol-phosphate 99.8 2.6E-18 5.7E-23 172.7 22.4 268 103-412 37-319 (371)
162 PRK07503 methionine gamma-lyas 99.8 1.3E-18 2.9E-23 176.6 20.4 213 144-393 65-283 (403)
163 TIGR02379 ECA_wecE TDP-4-keto- 99.8 7.5E-18 1.6E-22 169.6 25.5 239 114-393 9-271 (376)
164 PRK05355 3-phosphoserine/phosp 99.8 1.6E-18 3.4E-23 173.6 20.2 261 104-395 4-283 (360)
165 PF01276 OKR_DC_1: Orn/Lys/Arg 99.8 2.7E-19 5.8E-24 179.4 14.5 229 153-399 71-327 (417)
166 PRK07810 O-succinylhomoserine 99.8 1.8E-18 3.9E-23 175.5 20.5 216 142-395 68-290 (403)
167 PRK06234 methionine gamma-lyas 99.8 1.8E-18 3.9E-23 175.5 20.3 213 144-393 64-284 (400)
168 PRK08056 threonine-phosphate d 99.8 4.6E-18 9.9E-23 170.0 22.8 266 102-412 20-301 (356)
169 TIGR01324 cysta_beta_ly_B cyst 99.8 2.7E-18 5.8E-23 172.8 20.7 212 142-393 48-266 (377)
170 cd00614 CGS_like CGS_like: Cys 99.8 2.1E-18 4.6E-23 173.4 19.9 214 142-394 38-258 (369)
171 PRK08249 cystathionine gamma-s 99.8 4.3E-18 9.4E-23 172.5 22.3 213 142-393 62-280 (398)
172 PRK08247 cystathionine gamma-s 99.8 4.2E-18 9.1E-23 171.0 22.0 216 142-397 50-273 (366)
173 PRK07865 N-succinyldiaminopime 99.8 1E-17 2.2E-22 168.0 24.6 289 79-411 3-312 (364)
174 PLN02607 1-aminocyclopropane-1 99.8 5.5E-18 1.2E-22 174.2 23.1 287 104-414 49-374 (447)
175 PRK09257 aromatic amino acid a 99.8 4.1E-18 8.8E-23 172.8 21.8 308 83-412 5-354 (396)
176 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.8 1.9E-17 4.2E-22 166.7 26.6 258 115-413 10-298 (375)
177 PRK03321 putative aminotransfe 99.8 3.3E-18 7.3E-23 170.5 20.6 267 103-412 23-303 (352)
178 TIGR01329 cysta_beta_ly_E cyst 99.8 2.3E-18 4.9E-23 173.5 19.4 212 142-393 45-263 (378)
179 PRK07269 cystathionine gamma-s 99.8 1.9E-18 4.2E-23 173.0 18.2 211 142-393 52-268 (364)
180 cd00611 PSAT_like Phosphoserin 99.8 2E-18 4.3E-23 172.7 17.3 260 105-395 1-281 (355)
181 PRK08114 cystathionine beta-ly 99.8 5.1E-18 1.1E-22 170.8 20.1 213 142-393 60-280 (395)
182 PRK06460 hypothetical protein; 99.8 4.7E-18 1E-22 171.2 19.8 212 143-393 44-261 (376)
183 PLN02724 Molybdenum cofactor s 99.8 1.5E-17 3.2E-22 182.4 25.3 268 111-399 43-372 (805)
184 COG0076 GadB Glutamate decarbo 99.8 2.6E-17 5.7E-22 168.5 25.5 278 109-411 69-379 (460)
185 PRK03080 phosphoserine aminotr 99.8 4.6E-18 9.9E-23 171.5 19.6 255 103-398 12-297 (378)
186 TIGR03799 NOD_PanD_pyr putativ 99.8 3.1E-17 6.7E-22 170.7 26.3 253 144-414 125-440 (522)
187 PRK09028 cystathionine beta-ly 99.8 6E-18 1.3E-22 170.7 20.4 211 143-393 60-277 (394)
188 PRK04366 glycine dehydrogenase 99.8 3E-17 6.5E-22 170.4 26.2 270 112-411 80-385 (481)
189 cd06450 DOPA_deC_like DOPA dec 99.8 8E-18 1.7E-22 166.9 20.6 226 145-413 35-287 (345)
190 PRK07050 cystathionine beta-ly 99.8 7E-18 1.5E-22 170.8 20.1 215 142-395 63-285 (394)
191 PLN02509 cystathionine beta-ly 99.8 1.2E-17 2.5E-22 171.6 21.8 215 142-395 131-352 (464)
192 TIGR02080 O_succ_thio_ly O-suc 99.8 1.6E-17 3.5E-22 167.5 22.4 213 142-394 49-269 (382)
193 PRK09275 aspartate aminotransf 99.8 8.4E-18 1.8E-22 174.5 20.8 204 103-329 101-328 (527)
194 PRK00950 histidinol-phosphate 99.8 9.2E-18 2E-22 167.8 20.5 263 103-412 35-307 (361)
195 PRK08064 cystathionine beta-ly 99.8 7.8E-18 1.7E-22 170.4 20.0 214 142-394 52-271 (390)
196 PRK05613 O-acetylhomoserine am 99.8 1.3E-17 2.8E-22 170.6 21.7 161 142-328 67-233 (437)
197 PLN02397 aspartate transaminas 99.8 1.2E-17 2.7E-22 170.8 21.3 252 147-412 94-377 (423)
198 PRK07671 cystathionine beta-ly 99.8 1.4E-17 3E-22 167.8 21.3 215 142-395 48-269 (377)
199 PRK14809 histidinol-phosphate 99.8 2.3E-17 5E-22 164.9 22.8 266 102-412 30-306 (357)
200 TIGR03539 DapC_actino succinyl 99.8 2.4E-17 5.3E-22 164.8 22.8 266 102-411 21-306 (357)
201 PRK01688 histidinol-phosphate 99.8 3.3E-18 7.2E-23 170.8 16.4 231 153-412 62-304 (351)
202 cd00609 AAT_like Aspartate ami 99.8 1.7E-16 3.7E-21 156.5 27.7 247 146-413 38-298 (350)
203 PRK06358 threonine-phosphate d 99.8 3.6E-17 7.8E-22 163.5 23.0 264 104-412 21-302 (354)
204 KOG0259 Tyrosine aminotransfer 99.8 8.7E-17 1.9E-21 154.8 24.2 274 114-411 79-371 (447)
205 PRK07392 threonine-phosphate d 99.8 5.2E-17 1.1E-21 162.6 23.8 264 103-412 23-304 (360)
206 PRK05839 hypothetical protein; 99.8 8.5E-17 1.8E-21 162.0 25.4 270 103-412 25-317 (374)
207 PRK06176 cystathionine gamma-s 99.8 1.3E-17 2.7E-22 168.2 19.1 212 142-393 48-266 (380)
208 PRK04311 selenocysteine syntha 99.8 4.5E-17 9.7E-22 167.2 23.2 251 110-393 94-376 (464)
209 TIGR03801 asp_4_decarbox aspar 99.8 1.9E-17 4.2E-22 171.6 20.5 207 103-329 95-327 (521)
210 PTZ00376 aspartate aminotransf 99.8 2.7E-17 5.9E-22 167.2 21.0 242 148-412 76-359 (404)
211 TIGR00474 selA seryl-tRNA(sec) 99.8 8.2E-17 1.8E-21 164.9 24.5 250 110-392 89-370 (454)
212 TIGR03542 DAPAT_plant LL-diami 99.8 1.4E-16 3E-21 162.0 25.9 277 102-413 33-347 (402)
213 PRK06836 aspartate aminotransf 99.8 1.3E-16 2.9E-21 161.7 25.6 279 104-412 35-337 (394)
214 PRK15407 lipopolysaccharide bi 99.8 2.3E-16 5E-21 161.7 27.5 217 146-393 65-328 (438)
215 PLN02263 serine decarboxylase 99.8 2.1E-16 4.5E-21 161.0 26.7 242 146-410 131-397 (470)
216 PRK04781 histidinol-phosphate 99.8 4E-17 8.6E-22 163.8 21.3 233 154-412 65-311 (364)
217 PRK05937 8-amino-7-oxononanoat 99.8 6.5E-17 1.4E-21 162.6 22.8 252 108-393 9-284 (370)
218 PRK08134 O-acetylhomoserine am 99.8 3.9E-17 8.4E-22 167.0 21.4 157 142-325 62-224 (433)
219 TIGR03531 selenium_SpcS O-phos 99.8 1E-16 2.2E-21 163.2 24.1 241 146-406 103-360 (444)
220 PRK05967 cystathionine beta-ly 99.8 2.5E-17 5.4E-22 166.0 19.5 214 141-393 61-280 (395)
221 PRK04635 histidinol-phosphate 99.8 1.8E-17 4E-22 165.5 17.9 228 155-412 67-304 (354)
222 TIGR01364 serC_1 phosphoserine 99.8 3.6E-17 7.8E-22 163.1 19.4 257 113-398 2-276 (349)
223 COG1167 ARO8 Transcriptional r 99.8 1.7E-16 3.6E-21 163.8 24.8 246 147-414 135-396 (459)
224 PRK06702 O-acetylhomoserine am 99.8 4.3E-17 9.3E-22 166.0 19.9 159 142-326 59-223 (432)
225 PRK07908 hypothetical protein; 99.8 2.8E-16 6E-21 156.7 25.0 263 102-412 22-294 (349)
226 PRK05939 hypothetical protein; 99.8 3.9E-17 8.4E-22 165.4 18.9 150 142-319 45-197 (397)
227 PRK05994 O-acetylhomoserine am 99.7 1.2E-16 2.6E-21 163.5 22.1 156 144-326 63-224 (427)
228 PRK06084 O-acetylhomoserine am 99.7 8.9E-17 1.9E-21 164.2 21.1 160 142-328 56-221 (425)
229 PRK14808 histidinol-phosphate 99.7 1.8E-16 3.9E-21 157.3 21.6 259 102-412 19-289 (335)
230 PRK08248 O-acetylhomoserine am 99.7 1.2E-16 2.6E-21 163.4 20.7 160 142-328 62-227 (431)
231 PRK00451 glycine dehydrogenase 99.7 1.6E-16 3.5E-21 163.6 21.6 234 152-411 116-389 (447)
232 PLN02414 glycine dehydrogenase 99.7 2.9E-16 6.2E-21 172.3 24.5 241 149-414 569-848 (993)
233 COG2008 GLY1 Threonine aldolas 99.7 3E-16 6.5E-21 151.4 21.6 270 109-413 5-291 (342)
234 TIGR01326 OAH_OAS_sulfhy OAH/O 99.7 1.4E-16 3.1E-21 162.6 20.5 159 143-328 56-219 (418)
235 PRK07812 O-acetylhomoserine am 99.7 1.7E-16 3.6E-21 162.3 21.0 160 142-327 67-232 (436)
236 PRK07049 methionine gamma-lyas 99.7 1.9E-16 4.2E-21 161.8 21.1 216 144-396 83-315 (427)
237 PRK06434 cystathionine gamma-l 99.7 8.5E-17 1.8E-21 161.9 18.2 210 142-393 62-278 (384)
238 PRK15029 arginine decarboxylas 99.7 7.1E-17 1.5E-21 172.7 18.5 223 153-393 210-464 (755)
239 PLN02880 tyrosine decarboxylas 99.7 3.4E-16 7.5E-21 162.3 22.5 253 145-413 119-419 (490)
240 PRK03967 histidinol-phosphate 99.7 3.5E-16 7.5E-21 155.4 21.5 260 103-411 19-287 (337)
241 PF01053 Cys_Met_Meta_PP: Cys/ 99.7 1.9E-16 4E-21 159.2 19.5 221 133-393 46-274 (386)
242 KOG1359 Glycine C-acetyltransf 99.7 4.7E-17 1E-21 151.6 14.0 257 104-399 68-341 (417)
243 PRK07582 cystathionine gamma-l 99.7 2.7E-16 5.9E-21 157.8 19.6 208 144-393 51-264 (366)
244 PLN02590 probable tyrosine dec 99.7 1.6E-15 3.5E-20 157.9 25.8 254 144-413 166-467 (539)
245 COG0626 MetC Cystathionine bet 99.7 5.3E-16 1.2E-20 154.6 21.0 216 142-395 61-285 (396)
246 cd01494 AAT_I Aspartate aminot 99.7 2.3E-16 5E-21 139.2 16.2 163 153-327 5-170 (170)
247 PF00282 Pyridoxal_deC: Pyrido 99.7 5.9E-15 1.3E-19 148.2 26.5 250 144-410 75-371 (373)
248 PRK13578 ornithine decarboxyla 99.7 1.7E-16 3.7E-21 168.3 15.7 231 153-398 179-445 (720)
249 PRK05664 threonine-phosphate d 99.7 1.8E-15 4E-20 149.8 21.2 214 154-411 55-278 (330)
250 TIGR01140 L_thr_O3P_dcar L-thr 99.7 1.8E-15 4E-20 149.7 21.1 254 102-412 17-282 (330)
251 PRK06425 histidinol-phosphate 99.7 1.2E-15 2.5E-20 151.3 19.7 221 154-412 46-280 (332)
252 PLN02452 phosphoserine transam 99.7 1.3E-15 2.8E-20 152.3 19.8 263 103-395 7-288 (365)
253 TIGR01366 serC_3 phosphoserine 99.7 7.8E-16 1.7E-20 154.3 18.0 258 104-398 4-286 (361)
254 TIGR00461 gcvP glycine dehydro 99.7 3.3E-15 7.1E-20 162.3 23.2 243 147-414 529-808 (939)
255 PRK06959 putative threonine-ph 99.7 1.7E-15 3.7E-20 150.6 19.1 218 153-412 58-284 (339)
256 PRK09440 avtA valine--pyruvate 99.7 7.2E-15 1.6E-19 149.9 23.9 284 102-413 30-347 (416)
257 PRK05367 glycine dehydrogenase 99.7 6.1E-15 1.3E-19 162.5 24.2 243 147-414 541-816 (954)
258 PRK08637 hypothetical protein; 99.7 1.2E-14 2.5E-19 147.2 24.3 243 148-412 48-334 (388)
259 TIGR02617 tnaA_trp_ase tryptop 99.7 6E-15 1.3E-19 147.7 21.1 272 113-416 54-365 (467)
260 PF01212 Beta_elim_lyase: Beta 99.7 5.2E-17 1.1E-21 157.4 5.3 261 110-410 4-286 (290)
261 KOG0256 1-aminocyclopropane-1- 99.7 1.6E-14 3.5E-19 140.4 22.0 229 171-417 149-401 (471)
262 TIGR01365 serC_2 phosphoserine 99.6 7.9E-15 1.7E-19 146.9 19.1 256 106-399 6-289 (374)
263 PRK12566 glycine dehydrogenase 99.6 5.4E-14 1.2E-18 152.1 24.8 243 146-414 542-817 (954)
264 COG1103 Archaea-specific pyrid 99.6 8.7E-14 1.9E-18 128.7 20.7 263 102-405 15-311 (382)
265 PF06838 Met_gamma_lyase: Meth 99.6 2.8E-13 6E-18 131.0 24.6 231 146-401 56-304 (403)
266 PRK08354 putative aminotransfe 99.6 4.1E-14 8.8E-19 139.0 19.4 179 103-326 9-196 (311)
267 PRK15399 lysine decarboxylase 99.6 2.9E-14 6.3E-19 151.3 19.0 218 153-393 200-442 (713)
268 PRK15400 lysine decarboxylase 99.6 1E-14 2.2E-19 154.8 15.3 219 153-393 200-442 (714)
269 TIGR00707 argD acetylornithine 99.6 1.7E-13 3.7E-18 137.8 23.3 274 103-412 28-330 (379)
270 KOG0053 Cystathionine beta-lya 99.6 3.3E-14 7.2E-19 140.4 17.0 214 142-393 75-294 (409)
271 KOG1357 Serine palmitoyltransf 99.6 3.2E-14 7E-19 139.7 16.6 257 113-409 155-439 (519)
272 COG2873 MET17 O-acetylhomoseri 99.6 3E-14 6.5E-19 137.3 15.7 164 133-325 53-222 (426)
273 PRK00854 rocD ornithine--oxo-a 99.6 4.4E-13 9.6E-18 136.1 24.8 262 115-411 59-346 (401)
274 PRK07505 hypothetical protein; 99.6 3.7E-13 7.9E-18 136.9 23.3 252 104-388 48-320 (402)
275 PRK01278 argD acetylornithine 99.6 2.5E-13 5.4E-18 137.5 21.3 243 114-392 48-313 (389)
276 COG1003 GcvP Glycine cleavage 99.6 2.8E-13 6E-18 132.9 19.9 235 151-414 112-386 (496)
277 KOG1368 Threonine aldolase [Am 99.6 1.3E-13 2.8E-18 129.1 16.8 256 114-411 34-313 (384)
278 PRK12462 phosphoserine aminotr 99.6 4.2E-13 9.2E-18 133.4 20.7 265 103-396 4-288 (364)
279 cd00610 OAT_like Acetyl ornith 99.5 1.1E-12 2.3E-17 133.5 24.0 280 103-413 37-355 (413)
280 PRK03244 argD acetylornithine 99.5 2.2E-12 4.8E-17 130.9 24.1 266 115-412 61-342 (398)
281 TIGR03811 tyr_de_CO2_Ent tyros 99.5 2.3E-12 4.9E-17 135.8 24.3 253 144-415 119-505 (608)
282 COG1982 LdcC Arginine/lysine/o 99.5 2.1E-13 4.6E-18 139.7 15.4 227 153-399 75-319 (557)
283 PRK04073 rocD ornithine--oxo-a 99.5 2.7E-12 5.9E-17 130.3 22.8 258 114-412 57-346 (396)
284 TIGR03246 arg_catab_astC succi 99.5 2.3E-12 4.9E-17 130.9 22.1 250 103-394 36-319 (397)
285 PRK02936 argD acetylornithine 99.5 4E-12 8.7E-17 128.0 22.7 265 114-413 46-329 (377)
286 KOG0633 Histidinol phosphate a 99.5 7.1E-13 1.5E-17 122.1 14.8 218 171-412 88-319 (375)
287 PRK02627 acetylornithine amino 99.5 6.6E-12 1.4E-16 127.1 22.1 260 115-411 57-342 (396)
288 PRK05093 argD bifunctional N-s 99.5 8.2E-12 1.8E-16 127.1 22.0 248 104-394 42-324 (403)
289 TIGR01885 Orn_aminotrans ornit 99.4 3.1E-11 6.7E-16 122.7 24.2 244 114-397 54-330 (401)
290 PTZ00125 ornithine aminotransf 99.4 1.9E-11 4.2E-16 124.0 21.8 245 114-392 48-317 (400)
291 PRK12381 bifunctional succinyl 99.4 1.8E-11 3.9E-16 124.7 19.8 245 114-394 56-323 (406)
292 TIGR00713 hemL glutamate-1-sem 99.4 6.9E-11 1.5E-15 121.0 23.1 259 103-397 49-344 (423)
293 COG1921 SelA Selenocysteine sy 99.3 1.4E-10 3.1E-15 114.4 20.6 228 110-370 35-272 (395)
294 COG3844 Kynureninase [Amino ac 99.3 1E-10 2.2E-15 111.3 17.8 264 114-399 43-335 (407)
295 PLN02414 glycine dehydrogenase 99.3 2E-10 4.2E-15 126.8 22.8 262 113-411 116-418 (993)
296 PRK04260 acetylornithine amino 99.3 6.6E-10 1.4E-14 111.9 24.1 258 115-411 46-325 (375)
297 PRK08117 4-aminobutyrate amino 99.3 6.1E-10 1.3E-14 114.4 22.4 255 114-393 60-346 (433)
298 COG4992 ArgD Ornithine/acetylo 99.3 3.6E-10 7.8E-15 111.7 18.9 258 102-393 42-323 (404)
299 PRK03715 argD acetylornithine 99.3 1.2E-09 2.7E-14 110.8 23.0 261 114-412 53-338 (395)
300 KOG0634 Aromatic amino acid am 99.3 9.8E-10 2.1E-14 108.2 21.1 224 166-412 123-394 (472)
301 PRK05367 glycine dehydrogenase 99.2 8.4E-10 1.8E-14 122.2 22.9 227 152-411 125-390 (954)
302 COG1448 TyrB Aspartate/tyrosin 99.2 1E-09 2.2E-14 107.0 20.0 286 82-393 4-332 (396)
303 COG0001 HemL Glutamate-1-semia 99.2 4.9E-09 1.1E-13 104.7 23.6 251 115-398 71-351 (432)
304 COG4100 Cystathionine beta-lya 99.2 1.4E-09 3E-14 102.4 18.1 225 147-399 68-313 (416)
305 PLN00144 acetylornithine trans 99.2 3.2E-09 7E-14 107.3 22.5 245 114-392 32-305 (382)
306 PRK00062 glutamate-1-semialdeh 99.2 2.3E-09 5E-14 109.9 21.7 255 103-392 51-337 (426)
307 PLN02624 ornithine-delta-amino 99.2 3.3E-09 7.1E-14 110.2 22.8 246 114-393 92-364 (474)
308 PRK04612 argD acetylornithine 99.2 3.1E-09 6.7E-14 108.3 21.6 247 114-393 57-326 (408)
309 PF03841 SelA: L-seryl-tRNA se 99.2 1E-10 2.2E-15 114.5 8.9 244 111-393 15-296 (367)
310 PRK12403 putative aminotransfe 99.1 1.3E-08 2.9E-13 105.3 23.7 247 114-392 71-366 (460)
311 KOG1383 Glutamate decarboxylas 99.1 2E-09 4.4E-14 106.9 16.1 293 82-399 57-380 (491)
312 COG3033 TnaA Tryptophanase [Am 99.1 4.8E-09 1E-13 101.1 18.0 275 110-415 56-367 (471)
313 TIGR03372 putres_am_tran putre 99.1 1.5E-08 3.3E-13 104.1 22.6 249 113-393 91-366 (442)
314 PRK08088 4-aminobutyrate amino 99.1 4.4E-08 9.4E-13 100.5 25.7 272 114-411 58-359 (425)
315 PRK00615 glutamate-1-semialdeh 99.1 5.4E-08 1.2E-12 99.9 25.8 252 114-397 70-350 (433)
316 PRK08360 4-aminobutyrate amino 99.1 3.2E-08 6.9E-13 102.0 23.8 254 114-392 58-342 (443)
317 PRK06777 4-aminobutyrate amino 99.1 2.4E-08 5.2E-13 102.3 22.3 250 114-393 57-337 (421)
318 PLN02760 4-aminobutyrate:pyruv 99.1 2.5E-08 5.4E-13 104.2 22.5 262 103-393 90-407 (504)
319 PRK09792 4-aminobutyrate trans 99.1 4.6E-08 9.9E-13 100.2 23.7 253 114-392 57-336 (421)
320 PRK05964 adenosylmethionine--8 99.0 1.9E-08 4.1E-13 103.1 20.8 254 114-393 59-346 (423)
321 PRK11522 putrescine--2-oxoglut 99.0 2.8E-08 6E-13 102.8 21.8 247 114-393 99-373 (459)
322 PRK07046 aminotransferase; Val 99.0 3.4E-08 7.4E-13 102.0 22.3 244 114-392 92-363 (453)
323 KOG0629 Glutamate decarboxylas 99.0 4.7E-09 1E-13 103.1 14.0 242 148-405 141-426 (510)
324 COG0403 GcvP Glycine cleavage 99.0 1.7E-07 3.7E-12 92.7 24.6 224 153-399 125-386 (450)
325 PRK06058 4-aminobutyrate amino 99.0 5.7E-08 1.2E-12 100.2 22.3 254 114-392 73-357 (443)
326 PRK07495 4-aminobutyrate amino 99.0 4.6E-08 9.9E-13 100.3 21.0 254 114-392 57-336 (425)
327 PRK06105 aminotransferase; Pro 99.0 1.4E-07 3.1E-12 97.6 24.5 250 114-393 65-365 (460)
328 COG0160 GabT 4-aminobutyrate a 99.0 1.2E-07 2.5E-12 96.4 23.0 265 103-393 57-360 (447)
329 TIGR00700 GABAtrnsam 4-aminobu 99.0 9.2E-08 2E-12 98.0 22.6 256 113-392 49-335 (420)
330 KOG0258 Alanine aminotransfera 99.0 6.3E-08 1.4E-12 94.3 19.8 168 146-325 115-310 (475)
331 PF02347 GDC-P: Glycine cleava 99.0 5.6E-08 1.2E-12 98.2 19.4 214 152-393 114-364 (429)
332 PRK08593 4-aminobutyrate amino 99.0 1.3E-07 2.9E-12 97.5 22.8 249 114-392 59-345 (445)
333 PLN02482 glutamate-1-semialdeh 99.0 2.5E-07 5.5E-12 95.9 24.9 245 114-393 116-387 (474)
334 TIGR00508 bioA adenosylmethion 99.0 1.1E-07 2.4E-12 97.5 22.0 251 113-394 61-354 (427)
335 PRK13360 omega amino acid--pyr 99.0 2.9E-07 6.3E-12 94.8 25.1 251 113-393 62-362 (442)
336 PRK04013 argD acetylornithine/ 99.0 7.4E-08 1.6E-12 96.7 20.1 188 114-328 41-245 (364)
337 PRK09264 diaminobutyrate--2-ox 98.9 1E-07 2.2E-12 97.8 21.5 255 114-392 56-337 (425)
338 KOG2040 Glycine dehydrogenase 98.9 1.6E-08 3.5E-13 103.5 14.9 239 153-416 587-861 (1001)
339 PRK06209 glutamate-1-semialdeh 98.9 3.1E-07 6.6E-12 94.4 24.4 239 114-392 65-328 (431)
340 PRK07986 adenosylmethionine--8 98.9 1.9E-07 4.2E-12 95.7 22.6 249 114-393 60-350 (428)
341 PRK06541 hypothetical protein; 98.9 2.6E-07 5.7E-12 95.6 23.6 249 114-393 69-365 (460)
342 PRK06918 4-aminobutyrate amino 98.9 1.7E-07 3.7E-12 96.9 21.7 248 114-392 71-357 (451)
343 KOG1358 Serine palmitoyltransf 98.9 2.1E-08 4.5E-13 97.7 13.6 275 103-413 95-395 (467)
344 TIGR00461 gcvP glycine dehydro 98.9 8.4E-08 1.8E-12 105.2 19.3 226 153-411 114-378 (939)
345 PRK06173 adenosylmethionine--8 98.9 4.5E-07 9.7E-12 93.1 23.6 268 114-412 61-373 (429)
346 PRK09221 beta alanine--pyruvat 98.9 4.1E-07 9E-12 93.8 22.8 249 114-393 66-365 (445)
347 PRK12389 glutamate-1-semialdeh 98.9 6.1E-07 1.3E-11 92.2 23.8 237 114-392 70-340 (428)
348 PRK05769 4-aminobutyrate amino 98.9 6.1E-07 1.3E-11 92.5 23.5 254 114-393 71-358 (441)
349 PRK06062 hypothetical protein; 98.8 6.5E-07 1.4E-11 92.5 22.6 247 114-392 70-356 (451)
350 COG3977 Alanine-alpha-ketoisov 98.8 4.3E-07 9.4E-12 85.9 19.1 218 102-341 30-271 (417)
351 TIGR02407 ectoine_ectB diamino 98.8 5.4E-07 1.2E-11 92.1 21.1 255 114-392 52-333 (412)
352 TIGR00709 dat 2,4-diaminobutyr 98.8 9.3E-07 2E-11 91.2 22.8 248 114-392 56-343 (442)
353 KOG0628 Aromatic-L-amino-acid/ 98.8 1.5E-07 3.2E-12 93.6 15.9 259 142-416 107-414 (511)
354 PRK06149 hypothetical protein; 98.8 1.9E-06 4E-11 97.1 26.0 249 114-392 600-884 (972)
355 PRK05630 adenosylmethionine--8 98.8 8.1E-07 1.8E-11 91.0 21.2 244 114-392 57-346 (422)
356 PRK06082 4-aminobutyrate amino 98.8 1.6E-06 3.4E-11 89.9 23.2 247 114-392 88-367 (459)
357 PRK05639 4-aminobutyrate amino 98.7 4.4E-06 9.4E-11 86.5 24.2 252 114-392 70-359 (457)
358 PRK07480 putative aminotransfe 98.7 3.9E-06 8.4E-11 86.9 23.5 249 114-392 67-363 (456)
359 PRK07482 hypothetical protein; 98.7 3.4E-06 7.5E-11 87.4 23.1 248 114-392 67-366 (461)
360 PRK07678 aminotransferase; Val 98.7 1.8E-06 3.9E-11 89.2 21.0 245 114-392 64-358 (451)
361 PRK05965 hypothetical protein; 98.7 3.3E-06 7.2E-11 87.5 22.4 257 114-393 63-362 (459)
362 PF00202 Aminotran_3: Aminotra 98.7 2.3E-06 4.9E-11 85.3 19.7 253 114-392 33-315 (339)
363 PRK06148 hypothetical protein; 98.7 5.5E-06 1.2E-10 93.5 25.0 247 114-393 639-925 (1013)
364 KOG1402 Ornithine aminotransfe 98.7 5.3E-06 1.1E-10 79.6 20.6 244 114-393 76-347 (427)
365 PRK06916 adenosylmethionine--8 98.6 2.4E-06 5.2E-11 88.5 19.8 250 113-393 72-371 (460)
366 PRK06938 diaminobutyrate--2-ox 98.6 3.8E-06 8.3E-11 87.1 20.3 254 114-392 80-368 (464)
367 PRK06943 adenosylmethionine--8 98.6 1.5E-05 3.3E-10 82.4 24.6 250 113-393 70-368 (453)
368 PRK07036 hypothetical protein; 98.6 6.7E-06 1.4E-10 85.4 21.7 249 114-392 68-367 (466)
369 PRK07481 hypothetical protein; 98.6 9.4E-06 2E-10 83.9 22.3 257 114-393 59-360 (449)
370 PRK07030 adenosylmethionine--8 98.6 1.1E-05 2.3E-10 83.9 22.7 249 114-393 64-362 (466)
371 PRK06917 hypothetical protein; 98.6 6.8E-06 1.5E-10 84.9 21.1 250 113-393 47-344 (447)
372 KOG1404 Alanine-glyoxylate ami 98.6 3.1E-06 6.8E-11 82.9 16.9 112 267-393 234-352 (442)
373 COG1932 SerC Phosphoserine ami 98.6 2.5E-06 5.3E-11 83.2 15.7 263 103-395 5-288 (365)
374 PRK07483 hypothetical protein; 98.5 8E-06 1.7E-10 84.2 20.6 249 113-392 46-343 (443)
375 PRK06931 diaminobutyrate--2-ox 98.5 3.7E-05 8E-10 79.7 23.8 254 114-392 75-362 (459)
376 PRK08742 adenosylmethionine--8 98.5 4.2E-05 9.1E-10 79.5 23.1 204 113-340 80-328 (472)
377 PF05889 SLA_LP_auto_ag: Solub 98.4 1.5E-06 3.3E-11 86.2 11.1 255 141-414 49-319 (389)
378 PRK12566 glycine dehydrogenase 98.3 4.5E-05 9.8E-10 83.8 20.9 218 153-399 129-381 (954)
379 COG0161 BioA Adenosylmethionin 98.3 7.9E-05 1.7E-09 75.7 21.0 138 239-392 199-359 (449)
380 TIGR03251 LAT_fam L-lysine 6-t 98.3 5.3E-05 1.1E-09 77.9 19.9 83 240-327 205-298 (431)
381 TIGR00699 GABAtrns_euk 4-amino 98.3 6.7E-05 1.5E-09 77.6 20.3 139 239-393 237-388 (464)
382 PF12897 Aminotran_MocR: Alani 98.3 0.00012 2.6E-09 72.3 20.5 173 137-329 61-270 (425)
383 KOG1401 Acetylornithine aminot 98.3 7.9E-05 1.7E-09 73.7 19.0 255 113-392 72-351 (433)
384 PRK08297 L-lysine aminotransfe 98.3 4.9E-05 1.1E-09 78.4 18.6 141 239-392 211-364 (443)
385 PLN02974 adenosylmethionine-8- 98.2 0.00031 6.7E-09 77.2 22.4 91 241-340 567-676 (817)
386 KOG1411 Aspartate aminotransfe 97.9 0.00019 4.1E-09 69.5 13.2 289 81-395 29-361 (427)
387 KOG1412 Aspartate aminotransfe 97.6 0.0022 4.7E-08 61.6 14.4 212 171-394 102-340 (410)
388 KOG1403 Predicted alanine-glyo 97.6 0.0028 6.1E-08 60.5 15.0 215 103-342 51-302 (452)
389 PLN02994 1-aminocyclopropane-1 97.4 0.0006 1.3E-08 59.9 7.8 55 147-203 95-152 (153)
390 KOG3846 L-kynurenine hydrolase 97.1 0.005 1.1E-07 59.1 10.4 263 112-392 77-374 (465)
391 KOG2040 Glycine dehydrogenase 97.0 0.036 7.8E-07 58.2 17.1 216 154-399 169-420 (1001)
392 KOG1405 4-aminobutyrate aminot 96.8 0.006 1.3E-07 59.6 8.8 140 237-393 252-407 (484)
393 KOG2790 Phosphoserine aminotra 96.4 0.026 5.7E-07 53.7 10.0 263 102-397 6-295 (370)
394 KOG3843 Predicted serine hydro 95.4 0.059 1.3E-06 50.8 7.6 111 236-354 139-261 (432)
395 PF04864 Alliinase_C: Allinase 95.3 0.15 3.3E-06 50.1 10.2 177 147-358 46-235 (363)
396 PF04131 NanE: Putative N-acet 79.3 5.4 0.00012 36.1 6.0 72 237-314 51-122 (192)
397 COG3010 NanE Putative N-acetyl 74.9 7 0.00015 35.9 5.5 70 238-314 86-157 (229)
398 COG1504 Uncharacterized conser 66.2 13 0.00028 30.5 4.7 48 236-284 47-94 (121)
399 cd02067 B12-binding B12 bindin 62.4 25 0.00054 28.8 6.1 43 237-279 36-78 (119)
400 COG2870 RfaE ADP-heptose synth 57.0 31 0.00068 35.0 6.5 63 225-287 115-179 (467)
401 KOG0630 Predicted pyridoxal-de 55.5 1.6E+02 0.0035 30.8 11.3 51 236-286 272-330 (838)
402 PF02310 B12-binding: B12 bind 55.3 26 0.00057 28.5 5.1 52 238-289 38-91 (121)
403 PRK02261 methylaspartate mutas 52.8 48 0.001 28.3 6.4 53 222-279 30-82 (137)
404 cd02072 Glm_B12_BD B12 binding 50.1 42 0.00092 28.4 5.5 54 222-280 26-79 (128)
405 PF14639 YqgF: Holliday-juncti 47.6 16 0.00034 31.9 2.6 43 237-279 49-91 (150)
406 cd02071 MM_CoA_mut_B12_BD meth 47.4 54 0.0012 27.2 5.8 51 223-278 27-77 (122)
407 TIGR01501 MthylAspMutase methy 46.8 48 0.001 28.3 5.3 54 222-280 28-81 (134)
408 TIGR03586 PseI pseudaminic aci 46.3 32 0.0007 34.1 4.8 89 235-328 141-241 (327)
409 cd05126 Mth938 Mth938 domain. 45.8 72 0.0016 26.5 6.1 50 237-287 45-94 (117)
410 smart00642 Aamy Alpha-amylase 44.7 19 0.00041 31.9 2.7 27 261-287 65-91 (166)
411 COG4820 EutJ Ethanolamine util 43.5 70 0.0015 29.5 6.0 89 156-278 132-221 (277)
412 PLN02672 methionine S-methyltr 43.4 2.5E+02 0.0054 32.6 11.8 134 148-293 430-571 (1082)
413 TIGR02370 pyl_corrinoid methyl 43.0 68 0.0015 29.2 6.1 60 222-286 111-174 (197)
414 COG1105 FruK Fructose-1-phosph 42.5 68 0.0015 31.5 6.3 54 235-288 108-168 (310)
415 cd02070 corrinoid_protein_B12- 41.7 71 0.0015 29.1 6.1 60 222-286 109-172 (201)
416 PF00128 Alpha-amylase: Alpha 41.4 17 0.00038 34.5 2.1 28 260-287 46-73 (316)
417 cd00984 DnaB_C DnaB helicase C 41.1 77 0.0017 29.2 6.4 48 237-284 105-168 (242)
418 PRK12595 bifunctional 3-deoxy- 40.8 64 0.0014 32.4 6.1 57 235-291 232-299 (360)
419 COG1091 RfbD dTDP-4-dehydrorha 38.8 85 0.0018 30.4 6.3 59 237-298 36-108 (281)
420 PRK09441 cytoplasmic alpha-amy 37.0 25 0.00055 36.7 2.6 28 260-287 75-102 (479)
421 COG1435 Tdk Thymidine kinase [ 36.5 2E+02 0.0043 26.4 7.9 97 176-284 15-115 (201)
422 TIGR00640 acid_CoA_mut_C methy 35.9 99 0.0022 26.2 5.6 53 222-279 29-81 (132)
423 COG2102 Predicted ATPases of P 35.0 1.8E+02 0.0039 27.2 7.4 108 172-283 5-116 (223)
424 PRK13397 3-deoxy-7-phosphohept 34.9 95 0.0021 29.5 5.8 58 235-292 129-197 (250)
425 TIGR01361 DAHP_synth_Bsub phos 34.2 1.2E+02 0.0026 28.9 6.6 57 235-291 139-206 (260)
426 PRK13396 3-deoxy-7-phosphohept 33.9 91 0.002 31.3 5.8 58 235-292 215-284 (352)
427 PLN02673 quinolinate synthetas 32.9 3.6E+02 0.0077 29.6 10.2 98 86-204 254-356 (724)
428 COG3414 SgaB Phosphotransferas 32.8 2E+02 0.0042 22.9 6.5 68 253-327 3-74 (93)
429 cd02069 methionine_synthase_B1 30.9 95 0.002 28.7 5.1 53 222-279 115-167 (213)
430 cd00248 Mth938-like Mth938-lik 30.6 1.8E+02 0.0039 23.7 6.2 50 237-287 38-87 (109)
431 PF01248 Ribosomal_L7Ae: Ribos 30.0 1.1E+02 0.0024 23.8 4.8 45 240-286 20-65 (95)
432 cd05560 Xcc1710_like Xcc1710_l 29.0 1.9E+02 0.0041 23.6 6.0 49 237-287 39-87 (109)
433 PF02603 Hpr_kinase_N: HPr Ser 28.6 86 0.0019 26.3 4.1 43 238-285 65-111 (127)
434 PF03437 BtpA: BtpA family; I 27.4 71 0.0015 30.5 3.6 71 239-314 159-231 (254)
435 cd02065 B12-binding_like B12 b 27.3 1.7E+02 0.0037 23.6 5.7 52 238-289 37-90 (125)
436 TIGR03569 NeuB_NnaB N-acetylne 26.2 93 0.002 30.9 4.4 90 235-328 140-242 (329)
437 PRK13602 putative ribosomal pr 24.3 1.4E+02 0.003 23.0 4.2 44 240-285 16-59 (82)
438 TIGR02026 BchE magnesium-proto 24.1 1.5E+02 0.0031 31.2 5.6 54 236-290 48-103 (497)
439 PLN00196 alpha-amylase; Provis 24.0 56 0.0012 33.7 2.4 28 260-287 86-113 (428)
440 PRK00945 acetyl-CoA decarbonyl 23.7 2.5E+02 0.0053 25.1 6.2 63 237-299 21-83 (171)
441 PF01408 GFO_IDH_MocA: Oxidore 23.3 1.5E+02 0.0033 23.7 4.6 32 253-284 87-118 (120)
442 CHL00073 chlN photochlorophyll 22.7 1.5E+02 0.0032 30.9 5.2 53 239-293 81-140 (457)
443 COG0296 GlgB 1,4-alpha-glucan 22.6 77 0.0017 34.3 3.2 34 255-288 203-236 (628)
444 COG2099 CobK Precorrin-6x redu 22.1 5.6E+02 0.012 24.5 8.4 87 172-283 5-97 (257)
445 TIGR00789 flhB_rel flhB C-term 21.9 75 0.0016 24.7 2.2 20 268-287 29-48 (82)
446 KOG2792 Putative cytochrome C 21.8 1.1E+02 0.0025 29.1 3.8 37 239-282 190-226 (280)
447 PRK10785 maltodextrin glucosid 21.6 66 0.0014 34.7 2.5 27 261-287 221-247 (598)
448 PLN02361 alpha-amylase 21.4 73 0.0016 32.5 2.7 28 260-287 70-97 (401)
449 cd05565 PTS_IIB_lactose PTS_II 21.2 1.6E+02 0.0035 23.7 4.1 55 253-313 2-56 (99)
450 PF13481 AAA_25: AAA domain; P 20.8 1.3E+02 0.0029 26.4 4.0 46 239-284 128-184 (193)
451 COG0386 BtuE Glutathione perox 20.6 1.4E+02 0.0031 26.2 3.8 54 236-289 39-99 (162)
452 TIGR01306 GMP_reduct_2 guanosi 20.6 1.2E+02 0.0027 29.9 4.0 8 304-311 158-165 (321)
453 PRK09505 malS alpha-amylase; R 20.6 75 0.0016 34.9 2.7 26 262-287 288-313 (683)
454 PRK10933 trehalose-6-phosphate 20.5 74 0.0016 34.0 2.6 28 260-287 75-102 (551)
455 PF13378 MR_MLE_C: Enolase C-t 20.4 1.2E+02 0.0026 24.4 3.3 50 237-286 4-53 (111)
No 1
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=4.1e-89 Score=645.01 Aligned_cols=341 Identities=72% Similarity=1.148 Sum_probs=332.4
Q ss_pred cchhhccccccChhHHHHHHHHHHHhhhcccccccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHH
Q 014724 76 SSFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQK 155 (419)
Q Consensus 76 ~~~~~~~l~~~~~~~~~~~~~e~~r~~~~i~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~ 155 (419)
.++++.+|.+.|||++++|++|+.||+.+|+||+||||++.+|+||++++++|+|+|||||.|||+||+++|++|.+||+
T Consensus 14 ~~~~~~~l~~~DPev~~ii~~Ek~RQ~~gieLIaSENFts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~ 93 (477)
T KOG2467|consen 14 IKLGNTPLEEVDPEVHDIIEKEKERQKRGIELIASENFTSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQK 93 (477)
T ss_pred hhhhcCchhhcChHHHHHHHHHHHhhhcceeEeecccchHHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHHHH
Confidence 46778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCC
Q 014724 156 RALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDEST 235 (419)
Q Consensus 156 ~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~ 235 (419)
|+.+.|+++++.|||||++.||+.||+++++++++|||+||.+|+++|||++|||++..++++..+.+|+.+||.+|+++
T Consensus 94 RALeaF~ldp~kWGVNVQp~SGSPANfavYtall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~T 173 (477)
T KOG2467|consen 94 RALEAFGLDPEKWGVNVQPYSGSPANFAVYTALLKPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPST 173 (477)
T ss_pred HHHHHhCCCHHHCceeeccCCCCchhhHHHhhhcCCCCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHhhhcCCeEEEEcCCCCCCcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCCCCcEEEeCCCCc
Q 014724 236 GLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKS 315 (419)
Q Consensus 236 ~~iD~d~Le~~l~~~~pklIi~~~s~~p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~~~Div~~S~hK~ 315 (419)
|.||||.||+....++||+||++.|.|++.+|++++++||++.|++|++|+||++|++++++.++||++||||++|+||+
T Consensus 174 G~IDYD~Le~~A~~frPk~iiaG~SaY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey~DiVTTTTHKs 253 (477)
T KOG2467|consen 174 GYIDYDKLEKTATLFRPKLIIAGTSAYSRLIDYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEYCDIVTTTTHKS 253 (477)
T ss_pred CceehHHHHHHHHhcCCcEEEeccccchhhccHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCcccccceeecccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCeeEEEEeCCCc---------chhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHH
Q 014724 316 LRGPRGGMIFFKKDPV---------LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRAL 386 (419)
Q Consensus 316 l~GprgG~i~~~~~~~---------~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l 386 (419)
|+|||||+||++++.. ..|++.++|++++||++|||||+|+|+++++||+++..++|++|++|+.+|++.|
T Consensus 254 LRGPRg~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~~Nakal 333 (477)
T KOG2467|consen 254 LRGPRGAMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKEYQKQVLKNAKAL 333 (477)
T ss_pred ccCCcceeEEEeccCCcCCCCCCCcceechhhhhhhhccccccCCCCcchHHHHHHHHHhhCCHHHHHHHHHHHHHHHHH
Confidence 9999999999998632 2589999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCcEEecCCCcceeEEEEeCCccc
Q 014724 387 ASRLVELGYKLVSGGSDNHLVLVDLRPMVT 416 (419)
Q Consensus 387 ~~~L~~~G~~v~~~~t~~hlv~vd~~~~~~ 416 (419)
++.|.++|++++++|||||+|+||+|++|.
T Consensus 334 a~~l~~~Gy~lvtgGTDnHlvLvDLr~~G~ 363 (477)
T KOG2467|consen 334 ASALISRGYKLVTGGTDNHLVLVDLRPKGV 363 (477)
T ss_pred HHHHHHcCceEecCCccceEEEEeccccCC
Confidence 999999999999999999999999999985
No 2
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=9.3e-79 Score=584.37 Aligned_cols=321 Identities=59% Similarity=0.902 Sum_probs=312.0
Q ss_pred ccccccChhHHHHHHHHHHHhhhcccccccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 014724 81 YSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAA 160 (419)
Q Consensus 81 ~~l~~~~~~~~~~~~~e~~r~~~~i~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~ 160 (419)
..|.+.||+++++|++|..||++.|+||+|||++|+.|++|+++.++|+|+|||||.|||+||+++|++|++|.++++++
T Consensus 5 ~~l~~~d~~i~~~i~~e~~rq~~~ieLIASEN~~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~L 84 (413)
T COG0112 5 ASLADYDPEIFEAIQQELERQREHIELIASENFTSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKL 84 (413)
T ss_pred hhHHhcCHHHHHHHHHHHHHHhhceeeeeccccCCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHH
Confidence 56788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCH
Q 014724 161 FNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDY 240 (419)
Q Consensus 161 ~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~ 240 (419)
||++. +||++.||+.||.+++.+|++|||+||.+++.||||++||. ++..+|..|+.++|++|++++.||+
T Consensus 85 Fga~~----anVQPhSGs~AN~av~~All~pGDtimgm~l~~GGHltHg~-----~v~~sG~~~~~v~Y~vd~et~~IDy 155 (413)
T COG0112 85 FGAEY----ANVQPHSGSQANQAVYLALLQPGDTIMGLDLSHGGHLTHGS-----PVNFSGKLFNVVSYGVDPETGLIDY 155 (413)
T ss_pred hCCCc----cccCCCCchHHHHHHHHHHcCCCCeEecccCCCCCcccCCC-----CCCccceeEEeEecccccccCccCH
Confidence 99998 68999999999999999999999999999999999999994 6788999999999999988999999
Q ss_pred HHHHHHhhhcCCeEEEEcCCCCCCcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCCCCcEEEeCCCCcCCCCC
Q 014724 241 DMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPR 320 (419)
Q Consensus 241 d~Le~~l~~~~pklIi~~~s~~p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~~~Div~~S~hK~l~Gpr 320 (419)
|++++++.+++||+||++.|.|++..|++++++||+++|++|++|+||++||++.|.+++|++++|||++||||||+|||
T Consensus 156 D~~~k~a~e~kPK~ii~G~SaY~r~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~~AdvVTtTTHKTlrGPr 235 (413)
T COG0112 156 DEVEKLAKEVKPKLIIAGGSAYSRPIDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLPHADVVTTTTHKTLRGPR 235 (413)
T ss_pred HHHHHHHHHhCCCEEEECccccccccCHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCCccceEeCCcccCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecC
Q 014724 321 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSG 400 (419)
Q Consensus 321 gG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~ 400 (419)
||+|+++++ ++.++|++++||++||+|++|.+||.++|++++++++|++|.+++.+|++.|++.|.++||+++++
T Consensus 236 GG~Il~~~e-----el~kkin~aVFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~G~~vvsG 310 (413)
T COG0112 236 GGIILTNDE-----ELAKKINSAVFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKERGFKVVSG 310 (413)
T ss_pred ceEEEeccH-----HHHHHhhhhcCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHcCCeEecC
Confidence 999999985 899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcceeEEEEeCCcc
Q 014724 401 GSDNHLVLVDLRPMV 415 (419)
Q Consensus 401 ~t~~hlv~vd~~~~~ 415 (419)
+||||+++||+++++
T Consensus 311 gTdnHl~lVDl~~~~ 325 (413)
T COG0112 311 GTDNHLVLVDLRSKG 325 (413)
T ss_pred CccceEEEEEcccCC
Confidence 999999999999653
No 3
>PLN02271 serine hydroxymethyltransferase
Probab=100.00 E-value=1.9e-72 Score=571.35 Aligned_cols=338 Identities=61% Similarity=1.048 Sum_probs=317.5
Q ss_pred hhhccccccChhHHHHHHHHHHHhhhcccccccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q 014724 78 FVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRA 157 (419)
Q Consensus 78 ~~~~~l~~~~~~~~~~~~~e~~r~~~~i~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~l 157 (419)
+.++.|.+.||+++++|++|+.||+++|+||||||++|+.|++++++.++|+|++||||.|||+|+++++++|.+|.+++
T Consensus 124 ~~~~~l~~~Dpei~~li~~E~~rQ~~~l~LIASEN~~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era 203 (586)
T PLN02271 124 WGNQPLPEADPDIHELMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERA 203 (586)
T ss_pred HHhccHhhhCHHHHHHHHHHHHHHhcCeeeccccccCCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHH
Confidence 35667999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCcccccc-ccccccccccEEEecccCCCCC
Q 014724 158 LAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPK-RRVSGTSIYFESMPYRLDESTG 236 (419)
Q Consensus 158 a~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~-~~i~~~g~~~~~v~~~~~~~~~ 236 (419)
+++||+++++|++||++.||+.||++++.+|++|||+||+++++||||++|++++.. +.++..|..|+.++|+++++++
T Consensus 204 ~~lF~~~~~~~gaNVQp~SGs~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g 283 (586)
T PLN02271 204 LAAFGLDSEKWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTG 283 (586)
T ss_pred HHHhCCcccccccceeeccHHHHHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccccC
Confidence 999999998999999999999999999999999999999999999999999975421 3456788889999999987889
Q ss_pred CCCHHHHHHHhhhcCCeEEEEcCCCCCCcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCCCCcEEEeCCCCcC
Q 014724 237 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSL 316 (419)
Q Consensus 237 ~iD~d~Le~~l~~~~pklIi~~~s~~p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~~~Div~~S~hK~l 316 (419)
.||+|++++.+..++||+|+++.+.|++..|+++|++||+++|++|++|+||.+|++..+.+++|++++|++++|+||||
T Consensus 284 ~IDyd~lek~a~~~rPKLII~g~Saypr~~D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP~~~aDvvt~TTHKtL 363 (586)
T PLN02271 284 YIDYDKLEEKALDFRPKILICGGSSYPREWDYARFRQIADKCGAVLMCDMAHISGLVAAKECVNPFDYCDIVTSTTHKSL 363 (586)
T ss_pred ccCHHHHHHHhhhcCCeEEEECchhccCcCCHHHHHHHHHHcCCEEEEECcccccccccCcCCCCCcCCcEEEeCCcccC
Confidence 99999999977778999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCeeEEEEeCCCc--------------chhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHH
Q 014724 317 RGPRGGMIFFKKDPV--------------LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN 382 (419)
Q Consensus 317 ~GprgG~i~~~~~~~--------------~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n 382 (419)
+|||||+|+++++.. ..+++.++|++++||++||+||+|.+||++++++++..++|++|.+|+.+|
T Consensus 364 rGPrGG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~efk~Ya~QVv~N 443 (586)
T PLN02271 364 RGPRGGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKN 443 (586)
T ss_pred CCCCceEEEecccccccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhChHHHHHHHHHHHH
Confidence 999999999986411 124688999999999999999999999999999999989999999999999
Q ss_pred HHHHHHHHHhCCcEEecCCCcceeEEEEeCCcc
Q 014724 383 CRALASRLVELGYKLVSGGSDNHLVLVDLRPMV 415 (419)
Q Consensus 383 ~~~l~~~L~~~G~~v~~~~t~~hlv~vd~~~~~ 415 (419)
++.|++.|.++||++++++||||++|||++++|
T Consensus 444 AkaLA~~L~~~G~~vv~ggTdnHlvLvDl~~~g 476 (586)
T PLN02271 444 AQALASALLRRKCRLVTGGTDNHLLLWDLTTLG 476 (586)
T ss_pred HHHHHHHHHHCCCeEeeCCCCcceeeecCcccC
Confidence 999999999999999999999999999999886
No 4
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=100.00 E-value=1.2e-72 Score=560.22 Aligned_cols=333 Identities=59% Similarity=0.957 Sum_probs=281.8
Q ss_pred ccccChhHHHHHHHHHHHhhhcccccccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcC
Q 014724 83 LGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN 162 (419)
Q Consensus 83 l~~~~~~~~~~~~~e~~r~~~~i~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g 162 (419)
|++.||++++++++|.+||+++|+|+||||++||.|++++++.+.|+|++|||+.|||+|+++++++|++|+++++++||
T Consensus 1 l~~~d~ei~~li~~e~~rq~~~l~LiaSEN~~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~ 80 (399)
T PF00464_consen 1 LKEFDPEIYELIEKEEERQRSTLNLIASENYMSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFG 80 (399)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHSEE-CTT-----HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT
T ss_pred CcccCHHHHHHHHHHHHHHhcCccccCcccccCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHH
Q 014724 163 LDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDM 242 (419)
Q Consensus 163 ~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~ 242 (419)
+++++|.++|++.||+.||++++.+|++|||+||.+++.+|||++|+.....+++...|..++.++|++|++++.||+|+
T Consensus 81 ~~~~~w~anvqp~SGs~An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~ 160 (399)
T PF00464_consen 81 AEPKEWYANVQPHSGSQANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDE 160 (399)
T ss_dssp -STTTEEEE---SSHHHHHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHH
T ss_pred CCcccceEEeecCCchHHHHHHHHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHH
Confidence 99999999999999999999999999999999999999999999999876655666788899999999998899999999
Q ss_pred HHHHhhhcCCeEEEEcCCCCCCcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCCCCcEEEeCCCCcCCCCCee
Q 014724 243 LEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGG 322 (419)
Q Consensus 243 Le~~l~~~~pklIi~~~s~~p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~~~Div~~S~hK~l~GprgG 322 (419)
+++++++++||+|+++.|+||+..|++++++||++.|++|++|++|.+|+++.|.+++||+++|++++||||+|+|||||
T Consensus 161 l~~~a~~~kPklIi~G~S~y~~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~~ADvvt~sThKtl~GPrgg 240 (399)
T PF00464_consen 161 LEKLAKEHKPKLIICGASSYPRPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFPYADVVTGSTHKTLRGPRGG 240 (399)
T ss_dssp HHHHHHHH--SEEEEE-SSTSS---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCCTSSEEEEESSGGG-SSS-E
T ss_pred HHHHHhhcCCCEEEECchhccCccCHHHHHHHHHhcCcEEEecccccccceehheecCccccceEEEeeccccccccCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCc--------chhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCC
Q 014724 323 MIFFKKDPV--------LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG 394 (419)
Q Consensus 323 ~i~~~~~~~--------~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G 394 (419)
+|+++++.. ..+++.++|++.+||++||+||+|.++|+++++++++.+++++|.+++.+|+++|++.|.+.|
T Consensus 241 iI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La~~L~~~G 320 (399)
T PF00464_consen 241 IILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALAEALQERG 320 (399)
T ss_dssp EEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 999993200 014899999999999999999999999999999999888999999999999999999999999
Q ss_pred cEEecCCCcceeEEEEeCCcc
Q 014724 395 YKLVSGGSDNHLVLVDLRPMV 415 (419)
Q Consensus 395 ~~v~~~~t~~hlv~vd~~~~~ 415 (419)
|+++.++|+||+||||+++++
T Consensus 321 ~~v~~ggTd~H~vlvd~~~~~ 341 (399)
T PF00464_consen 321 FKVVTGGTDNHQVLVDLRSFG 341 (399)
T ss_dssp -EEGGGS-SSSEEEEEGGGGT
T ss_pred cEEEECCCCCCeEEEEecccc
Confidence 999999999999999998865
No 5
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=100.00 E-value=1.6e-58 Score=468.37 Aligned_cols=319 Identities=45% Similarity=0.757 Sum_probs=294.8
Q ss_pred ccccccChhHHHHHHHHHHHhhhcccccccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 014724 81 YSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAA 160 (419)
Q Consensus 81 ~~l~~~~~~~~~~~~~e~~r~~~~i~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~ 160 (419)
..|.+.||+++++|++|..||++.|+|+||||++|+.|++++++.++|+|++||||.|||+|+++++++|.+|.++++++
T Consensus 28 ~~l~~~d~~~~~~~~~e~~rq~~~l~LiasEN~~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~l 107 (493)
T PRK13580 28 DVILHVEPRIAEAIRQELADQRSSLKLIASENYSSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKEL 107 (493)
T ss_pred HHHHhhCHHHHHHHHHHHHHHhcCceEecccccCCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHH
Confidence 44788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCceeEecCChHHHHHHHHHHccCC-------------------------------CCEEEEeCCCCCccccCc
Q 014724 161 FNLDENKWGVNVQPLSGSPANFEVYTAILKP-------------------------------HDRIMGLDLPHGGHLSHG 209 (419)
Q Consensus 161 ~g~~~~~~~v~V~~~sGt~A~~~~~~all~p-------------------------------GD~Vl~~~~~~~g~~s~~ 209 (419)
||.++ +||++.||+.||.+++.++++| ||+||.+++.+|||++|+
T Consensus 108 f~a~~----anvqp~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg 183 (493)
T PRK13580 108 FGAEH----AYVQPHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHG 183 (493)
T ss_pred hCCCc----ccccCCCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecC
Confidence 99988 6899999999999999999987 899999999999999998
Q ss_pred cccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCCcCChHHHHHHHHHhCCEEEEecccc
Q 014724 210 FMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHI 289 (419)
Q Consensus 210 ~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~~~dl~~I~~ia~~~ga~livD~ah~ 289 (419)
+ .....+..++..+|+++++++.+|++++++++.+.+|++++++.|++++..|+++|++||+++|+++++|+||+
T Consensus 184 ~-----~~n~~~~~~~~~~y~vd~~~g~iD~d~l~~~~~~~~plvii~g~S~~~~~~dl~~i~eia~~~gA~L~VD~AH~ 258 (493)
T PRK13580 184 F-----RPNISGKMFHQRSYGVDPDTGLLDYDEIAALAREFKPLILVAGYSAYPRRVNFAKLREIADEVGAVLMVDMAHF 258 (493)
T ss_pred c-----ccchhhheeeeEecccCcccCccCHHHHHHHHhhcCCEEEEeCccccCCCcCHHHHHHHHHHcCCEEEEECchh
Confidence 5 34567777889999998778999999999999988888999999999999999999999999999999999999
Q ss_pred ccccccCCcC---CCCCCCcEEEeCCCCcCCCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHH
Q 014724 290 SGLVAASVVA---DPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKH 366 (419)
Q Consensus 290 ~Gl~~~g~~~---~~~~~~Div~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~ 366 (419)
+|+++.+..+ ++++++||+++|+||+|+||+||+|++++ ++.+.++.. .|+++|+|+++.++|.+.++.+
T Consensus 259 ~Gligg~~~~~~~~~~~~~D~vtgT~hKaL~GP~GG~I~~~~------~l~~~L~~a-~P~i~gg~l~p~iAA~avAl~e 331 (493)
T PRK13580 259 AGLVAGKVFTGDEDPVPHADIVTTTTHKTLRGPRGGLVLAKK------EYADAVDKG-CPLVLGGPLPHVMAAKAVALAE 331 (493)
T ss_pred hceeccccchhhcCCCCCCcEEEeCChhhccCCCeEEEEecH------HHHHHHhhC-CCcccCCCccHHHHHHHHHHHH
Confidence 9998755543 56668999999999999999999999997 788888766 4889999999999999999999
Q ss_pred hcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeEEEEeCCcc
Q 014724 367 AQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMV 415 (419)
Q Consensus 367 ~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~vd~~~~~ 415 (419)
+.++++++|++++++|+++|++.|.+.||+++.++|++|+|+|++++.+
T Consensus 332 ~~~~ef~~y~~~l~~Na~~La~~L~~~G~~vv~ggTdshIV~V~lg~~~ 380 (493)
T PRK13580 332 ARTPEFQKYAQQVVDNARALAEGFLKRGARLVTGGTDNHLVLIDVTSFG 380 (493)
T ss_pred HhCccHHHHHHHHHHHHHHHHHHHHhcCCCccCCCCCCCEEEEEeCCHH
Confidence 8877788999999999999999999999999877799999999998654
No 6
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=100.00 E-value=3.6e-57 Score=465.20 Aligned_cols=339 Identities=76% Similarity=1.213 Sum_probs=304.5
Q ss_pred chhhccccccChhHHHHHHHHHHHhhhcccccccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q 014724 77 SFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKR 156 (419)
Q Consensus 77 ~~~~~~l~~~~~~~~~~~~~e~~r~~~~i~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~ 156 (419)
.++...|.+.||+++++|++|..||+++|+||||||++|+.|++++++.++++|++|||++|||+|+++++++|++|+++
T Consensus 9 ~~~~~~~~~~d~~~~~~i~~e~~~q~~~l~liasen~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~ 88 (475)
T PLN03226 9 KWGNAPLEEVDPEIADIIEKEKRRQWKGLELIASENFTSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKR 88 (475)
T ss_pred hcchhhhhhcCHHHHHHHHHHHHHHHcCeeEecCCccCCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHH
Confidence 44566788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCC
Q 014724 157 ALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG 236 (419)
Q Consensus 157 la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~ 236 (419)
++++|+.+.++|.++++++||+.||.+++.++++|||+|++++.++|||++|++......++..+..++.++|.++++++
T Consensus 89 ~~~~f~~~~~~~~~nv~~~SG~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~~~g 168 (475)
T PLN03226 89 ALEAFRLDPEKWGVNVQPLSGSPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDESTG 168 (475)
T ss_pred HHHHhCCCcceeEEecCcCchHHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecCCCC
Confidence 99999999888888999999999999999999999999999999999999998643222334455566777888887789
Q ss_pred CCCHHHHHHHhhhcCCeEEEEcCCCCCCcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCCCCcEEEeCCCCcC
Q 014724 237 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSL 316 (419)
Q Consensus 237 ~iD~d~Le~~l~~~~pklIi~~~s~~p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~~~Div~~S~hK~l 316 (419)
.+|+++|++++.+++||+|+++.++|++..|+++|+++|+++|+++++|+||++|+++.+..++|++++|++++|+||||
T Consensus 169 ~iD~d~Le~~l~~~~pklIv~~~S~~s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p~~~~Div~~t~hK~L 248 (475)
T PLN03226 169 LIDYDKLEKKAMLFRPKLIIAGASAYPRDWDYARMRKIADKVGALLMCDMAHISGLVAAQEAASPFEYCDVVTTTTHKSL 248 (475)
T ss_pred CcCHHHHHHHHhhcCCeEEEEecCcCCCccCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCCCCCCeEEEecCcccc
Confidence 99999999999877899998888889999999999999999999999999999999988777788889999999999999
Q ss_pred CCCCeeEEEEeCCCcc--------hhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHH
Q 014724 317 RGPRGGMIFFKKDPVL--------GVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALAS 388 (419)
Q Consensus 317 ~GprgG~i~~~~~~~~--------~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~ 388 (419)
+||+||+|+++++... .+++.+.++...++.++|+|+++.++++++|++++..+++++|.+++.+|+++|++
T Consensus 249 ~GP~Gg~I~~~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~ 328 (475)
T PLN03226 249 RGPRGGMIFFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALAN 328 (475)
T ss_pred cCCCceEEEEchhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHH
Confidence 9999999999874210 01345567778888999999999999999999999877889999999999999999
Q ss_pred HHHhCCcEEecCCCcceeEEEEeCCcc
Q 014724 389 RLVELGYKLVSGGSDNHLVLVDLRPMV 415 (419)
Q Consensus 389 ~L~~~G~~v~~~~t~~hlv~vd~~~~~ 415 (419)
.|.+.||+++.++|++|+++||+++.+
T Consensus 329 ~L~~~G~~l~~~~t~~hi~lv~~~~~g 355 (475)
T PLN03226 329 RLMSKGYKLVTGGTDNHLVLWDLRPLG 355 (475)
T ss_pred HHHhCCCEEEcCCCCCCEEEEEccCCC
Confidence 999999999988899999999998765
No 7
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=100.00 E-value=1.5e-47 Score=394.13 Aligned_cols=334 Identities=69% Similarity=1.139 Sum_probs=287.8
Q ss_pred hhccccccChhHHHHHHHHHHHhhhcccccccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 014724 79 VDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRAL 158 (419)
Q Consensus 79 ~~~~l~~~~~~~~~~~~~e~~r~~~~i~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la 158 (419)
++..|.+.||++++++.+|..||+.+|+|++|||++||.|++++.+.+.++|++|+|+++|+.|.+..+.+|+.++++++
T Consensus 11 ~~~~~~~~d~~~~~~~~~~~~~~~~~l~l~~sen~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a 90 (452)
T PTZ00094 11 LNQSLKEADPELYELIEKEKERQIEGLELIASENFTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRAL 90 (452)
T ss_pred hhhhHhhhCHHHHHHHHHHHHHHHcCeeEecccccCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHH
Confidence 55668899999999999999999999999999999999999999999999999999999999999999999988999999
Q ss_pred HHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCC
Q 014724 159 AAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLV 238 (419)
Q Consensus 159 ~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~i 238 (419)
++||+++++|.++++++||+.||.+++.++++|||+|++.+.+|+++++++...........+..++..++++++ ++.+
T Consensus 91 ~lf~a~~~~~~~~~~~~sgt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~-~g~i 169 (452)
T PTZ00094 91 EAFGLDPEEWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNE-KGLI 169 (452)
T ss_pred HHhCCCcccceeecCCCchHHHHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccCC-CCCc
Confidence 999999877767778889999999999999999999999999999999876421111122344456666777764 5899
Q ss_pred CHHHHHHHhhhcCCeEEEEcCCCCCCcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCCCCcEEEeCCCCcCCC
Q 014724 239 DYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRG 318 (419)
Q Consensus 239 D~d~Le~~l~~~~pklIi~~~s~~p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~~~Div~~S~hK~l~G 318 (419)
|+++|++++++.+|++|+++.+++++..|+++|.++|+++|+++++|++|++|++..+..+.++.++|++++|+||||.|
T Consensus 170 d~~~L~~~l~~~~~~lvi~~~s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~~~~D~l~~S~hK~l~G 249 (452)
T PTZ00094 170 DYDKLEELAKAFRPKLIIAGASAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPFPYADVVTTTTHKSLRG 249 (452)
T ss_pred CHHHHHHHHHHhCCCEEEEeCCCCCCccCHHHHHHHHHHcCCEEEEeccchhccccCCCCCCCCCCCcEEEcCCccCCCC
Confidence 99999999977789998887788999999999999999999999999999999987666566666899999999999999
Q ss_pred CCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEe
Q 014724 319 PRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLV 398 (419)
Q Consensus 319 prgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~ 398 (419)
|+||+++++++.. ..+...++...+|.++|+++.+.+++++.+++++...+++++.+++.+++++|.+.|.+.|+++.
T Consensus 250 P~Gg~l~~~~~~~--~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~g~~v~ 327 (452)
T PTZ00094 250 PRSGLIFYRKKVK--PDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKRGYDLV 327 (452)
T ss_pred CCceEEEEecccc--hHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhCCcEEe
Confidence 9999999977421 12445566677888889999999999999999987667889999999999999999998999988
Q ss_pred cCCCcceeEEEEeCCcc
Q 014724 399 SGGSDNHLVLVDLRPMV 415 (419)
Q Consensus 399 ~~~t~~hlv~vd~~~~~ 415 (419)
.+++++|+++|++...+
T Consensus 328 ~~~~~~~~~~v~~~~~~ 344 (452)
T PTZ00094 328 TGGTDNHLVLVDLRPFG 344 (452)
T ss_pred cCCCCCceEeecCCcCC
Confidence 65567898888886544
No 8
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=100.00 E-value=3.6e-45 Score=372.42 Aligned_cols=325 Identities=59% Similarity=0.904 Sum_probs=278.7
Q ss_pred chhhccccccChhHHHHHHHHHHHhhhcccccccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q 014724 77 SFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKR 156 (419)
Q Consensus 77 ~~~~~~l~~~~~~~~~~~~~e~~r~~~~i~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~ 156 (419)
.|+++.|++.||+++++|++|..+|.+.|+|++|||+++|.|++++.+.+.++|+.|++++|++.|++.++++|+.++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~sen~~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~ 82 (416)
T PRK13034 3 FFFSDSLEEYDDEVFAAINKELERQQDHLELIASENFTSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIER 82 (416)
T ss_pred chhhhhHhhhCHHHHHHHHHHHHHHhcCeeecccccCCCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHH
Confidence 35788999999999999999999999999999999999999999999998889999999999999999999999889999
Q ss_pred HHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCC
Q 014724 157 ALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG 236 (419)
Q Consensus 157 la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~ 236 (419)
+++++|.+. +.+.+.||+.||.+++.++++|||+|++++..|++++..|. .....+..++...+++++.++
T Consensus 83 la~l~g~~~----alv~~~SG~~A~~~~l~al~~~GD~Vl~~~~~~~~~~~~g~-----~~~~~~~~~~~~~~~~~~~~~ 153 (416)
T PRK13034 83 AKQLFGCDY----ANVQPHSGSQANGAVYLALLKPGDTILGMSLSHGGHLTHGA-----KVSLSGKWYNAVQYGVDRLTG 153 (416)
T ss_pred HHHHhCCCc----eEEecCCcHHHHHHHHHHhcCCCCEEEEcCccceeeeecCC-----cceeccceeeeEEcccccccC
Confidence 999999986 45667899999999999999999999999999988765542 122233333445666766678
Q ss_pred CCCHHHHHHHhhhcCCeEEEEcCCCCCCcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCCCCcEEEeCCCCcC
Q 014724 237 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSL 316 (419)
Q Consensus 237 ~iD~d~Le~~l~~~~pklIi~~~s~~p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~~~Div~~S~hK~l 316 (419)
.+|++++++.++..++|+|+++.+.++...|+++|.++|++||++|++|+||+.|..+.|..+.++.++|++++|+||++
T Consensus 154 ~~d~~~le~~l~~~~~klVi~~~~~~g~~~dl~~l~~la~~~g~~livD~Aha~G~~~~g~~~~~~~~~Di~~~s~~K~l 233 (416)
T PRK13034 154 LIDYDEVEELAKEHKPKLIIAGFSAYPRELDFARFREIADEVGALLMVDMAHIAGLVAAGEHPNPFPHAHVVTTTTHKTL 233 (416)
T ss_pred CcCHHHHHHHHhhcCCeEEEECCCccccccCHHHHHHHHHHcCCEEEEeCcccccCcccCCCCCCCCCceEEEEeCcccC
Confidence 89999999998666789999987889998999999999999999999999999998877765566668999999999999
Q ss_pred CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcE
Q 014724 317 RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYK 396 (419)
Q Consensus 317 ~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~ 396 (419)
+||.||+++++++ ++.+.++...+++++++++.+.+++++.++.+...++..++.+++.+|+++|++.|.+.||+
T Consensus 234 ~g~~GG~v~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~G~~ 308 (416)
T PRK13034 234 RGPRGGMILTNDE-----EIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKERGYD 308 (416)
T ss_pred CCCCCeEEEECcH-----HHHHHHHhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHcCCE
Confidence 9999999998874 56666777777777777777778887778777765556788999999999999999999999
Q ss_pred EecCCCcceeEEEEeCCcc
Q 014724 397 LVSGGSDNHLVLVDLRPMV 415 (419)
Q Consensus 397 v~~~~t~~hlv~vd~~~~~ 415 (419)
+..+++++|+++|++...+
T Consensus 309 ~~~~~~~t~i~~v~~~~~~ 327 (416)
T PRK13034 309 LVSGGTDNHLLLVDLRPKG 327 (416)
T ss_pred eccCCCCCcEEEEEcCCCC
Confidence 8754579999999987543
No 9
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=100.00 E-value=9.2e-41 Score=340.39 Aligned_cols=321 Identities=58% Similarity=0.899 Sum_probs=267.0
Q ss_pred hccccccChhHHHHHHHHHHHhhhcccccccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q 014724 80 DYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALA 159 (419)
Q Consensus 80 ~~~l~~~~~~~~~~~~~e~~r~~~~i~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~ 159 (419)
-..|++.||+++++|+++..+++..|+|+++||++++.|++++...+.++|+.|+++++++.|.+..+.+|+.+++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~ 82 (416)
T PRK00011 3 MDNLAEYDPEIADAIEQELKRQEEHIELIASENFVSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKE 82 (416)
T ss_pred chhhhhcCHHHHHHHHHHHHHHhcCeeeecccCcCCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHH
Confidence 45689999999999999888889999999999999999999999888778888899999998988889999888899999
Q ss_pred HcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCC
Q 014724 160 AFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVD 239 (419)
Q Consensus 160 ~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD 239 (419)
++|++.. +|.++||+.|+..++.++++|||+|++++++|+++++.+. .+...+.+.+++.++++++++.+|
T Consensus 83 ~~g~~~~----~i~~~sgt~al~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~-----~~~~~~~g~~~~~~~~~~~~~~~d 153 (416)
T PRK00011 83 LFGAEYA----NVQPHSGSQANAAVYFALLKPGDTILGMDLAHGGHLTHGS-----PVNFSGKLYNVVSYGVDEETGLID 153 (416)
T ss_pred HhCCCce----eeecCCchHHHHHHHHHhcCCCCEEEEeccccCCcccccc-----ccccccceeeEeecCcCcccCCcC
Confidence 9999863 4777899999999999999999999999999988765442 112233334566666664568899
Q ss_pred HHHHHHHhhhcCCeEEEEcCCCCCCcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCCCCcEEEeCCCCcCCCC
Q 014724 240 YDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGP 319 (419)
Q Consensus 240 ~d~Le~~l~~~~pklIi~~~s~~p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~~~Div~~S~hK~l~Gp 319 (419)
++++++++++.++|+|+++.+++|...|+++|.++|+++|+++++|++|+.|..+.+..+.+++++|++++|+||+|+||
T Consensus 154 ~~~l~~~i~~~~~k~v~~~~~~~~~~~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~~~di~~~S~~K~l~g~ 233 (416)
T PRK00011 154 YDEVEKLALEHKPKLIIAGASAYSRPIDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVPHADVVTTTTHKTLRGP 233 (416)
T ss_pred HHHHHHHHHhcCCCEEEECCCcCCCccCHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCCCCcEEEecCCcCCCCC
Confidence 99999999766899999987888887899999999999999999999999887765544445557899999999999999
Q ss_pred CeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEec
Q 014724 320 RGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS 399 (419)
Q Consensus 320 rgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~ 399 (419)
+||+++++++ ++.+++.....++..+++....++++..++.+...++++++.+++.++++++.+.|++.|+++..
T Consensus 234 ~gg~i~~~~~-----~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 308 (416)
T PRK00011 234 RGGLILTNDE-----ELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAERGFRVVS 308 (416)
T ss_pred CceEEEeCCH-----HHHHHHHHHhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCCCeeee
Confidence 9999999754 67777776666666667767777777767766654556888999999999999999999998875
Q ss_pred CCCcceeEEEEeCCc
Q 014724 400 GGSDNHLVLVDLRPM 414 (419)
Q Consensus 400 ~~t~~hlv~vd~~~~ 414 (419)
+++++|++|+++.+.
T Consensus 309 ~~~~~~~~~i~~~~~ 323 (416)
T PRK00011 309 GGTDNHLVLVDLRSK 323 (416)
T ss_pred cCCCCeEEEEeCccc
Confidence 456789999998644
No 10
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=100.00 E-value=1e-40 Score=338.43 Aligned_cols=318 Identities=64% Similarity=1.008 Sum_probs=266.2
Q ss_pred ccChhHHHHHHHHHHHhhhcccccccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCC
Q 014724 85 EADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD 164 (419)
Q Consensus 85 ~~~~~~~~~~~~e~~r~~~~i~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~ 164 (419)
++|++++.+|.+|..++++.|+|+++++++++.|++++.+.+..+|..|+++.++|.|.+..+++|+.+++++++++|++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~ 81 (402)
T cd00378 2 DVDPEIAEIIKKENERQRETLELIASENFTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAE 81 (402)
T ss_pred CcCHHHHHHHHHHHHHHHhCeeeeccCCcCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCC
Confidence 68999999999998888999999999999999999999998878888899999999999999999988889999999998
Q ss_pred CCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHH
Q 014724 165 ENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLE 244 (419)
Q Consensus 165 ~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le 244 (419)
. .+|+++||++|+..++.++++|||+|++++|+|++++.++... .+...|..+..++++.+++++.+|+++++
T Consensus 82 ~----~~v~~~sgt~a~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~id~~~l~ 154 (402)
T cd00378 82 Y----ANVQPHSGSQANLAVYFALLEPGDTIMGLDLSHGGHLTHGSFT---KVSASGKLFESVPYGVDPETGLIDYDALE 154 (402)
T ss_pred c----eeeecCCcHHHHHHHHHHhcCCCCEEEEecCccCccccccccc---cccccceeEEEecCCcCcccCCcCHHHHH
Confidence 6 3577788999999999999999999999999999887654321 13345654555565544336899999999
Q ss_pred HHhhhcCCeEEEEcCCCCCCcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCCCCcEEEeCCCCcCCCCCeeEE
Q 014724 245 KTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMI 324 (419)
Q Consensus 245 ~~l~~~~pklIi~~~s~~p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~~~Div~~S~hK~l~GprgG~i 324 (419)
+.+.+.++|+|++++++||+..|+++|.++|++||++|++|++|+.|+++.+..+.++.++|++++|+||+|+||+||++
T Consensus 155 ~~i~~~~~~~v~~~~~~~~~~~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~~~dv~~~s~sK~l~G~~gg~i 234 (402)
T cd00378 155 KMALEFKPKLIVAGASAYPRPIDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLPGADVVTTTTHKTLRGPRGGLI 234 (402)
T ss_pred HHHHhCCCCEEEecCcccCCCcCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCcccCCcEEEeccccCCCCCCceEE
Confidence 99876689999998889998889999999999999999999999988876654444455789999999999999999999
Q ss_pred EEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcc
Q 014724 325 FFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDN 404 (419)
Q Consensus 325 ~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~ 404 (419)
+++++ ++.+++.....++..++++...+++++.++.+....+++++.+++.++++++.+.|++.|++++.....+
T Consensus 235 ~~~~~-----~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~ 309 (402)
T cd00378 235 LTRKG-----ELAKKINSAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKERGFKVVSGGTDN 309 (402)
T ss_pred EeccH-----HHHHHHHHHhCccccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCCeEeecCCCC
Confidence 99874 5777776655666667777777777777777665445678889999999999999999999887534578
Q ss_pred eeEEEEeCCc
Q 014724 405 HLVLVDLRPM 414 (419)
Q Consensus 405 hlv~vd~~~~ 414 (419)
|++|+++.+.
T Consensus 310 ~~v~v~~~~~ 319 (402)
T cd00378 310 HLVLVDLRPK 319 (402)
T ss_pred eEEEEeCCcc
Confidence 9999999753
No 11
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.95 E-value=4.5e-26 Score=229.96 Aligned_cols=286 Identities=18% Similarity=0.182 Sum_probs=207.8
Q ss_pred hcccccccCC--CChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCCh-HH
Q 014724 103 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-SP 179 (419)
Q Consensus 103 ~~i~L~~sen--~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sG-t~ 179 (419)
+.|+|..|+. .+|+.+++++...+.+... .|.. ..| +.+|++.+.+++.+.+|++.+. ..+|++|+| ++
T Consensus 29 ~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~~~-~Y~~---~~G---~~~LReaia~~~~~~~~~~~~~-~~eiivt~Ga~~ 100 (393)
T COG0436 29 DVIDLSIGEPDFPTPEHIIEAAIEALEEGGT-HYTP---SAG---IPELREAIAEKYKRRYGLDVDP-EEEIIVTAGAKE 100 (393)
T ss_pred CEEEeCCCCCCCCCCHHHHHHHHHHHhcccC-CCCC---CCC---CHHHHHHHHHHHHHHhCCCCCC-CCeEEEeCCHHH
Confidence 4789988874 4789999999988765321 2221 223 3478888999999999866431 123777776 57
Q ss_pred HHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCC--CCCCCCHHHHHHHhhhcCCeEEEE
Q 014724 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE--STGLVDYDMLEKTAILFRPKLIIA 257 (419)
Q Consensus 180 A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~--~~~~iD~d~Le~~l~~~~pklIi~ 257 (419)
|+..++.++++|||+|++++|.+..+.. .+.+.|. ++++++++. +++.+|+++|++.+.+ ++|+|++
T Consensus 101 al~~~~~a~~~pGDeVlip~P~Y~~y~~--------~~~~~gg--~~v~v~l~~~~~~f~~d~~~l~~~i~~-ktk~i~l 169 (393)
T COG0436 101 ALFLAFLALLNPGDEVLIPDPGYPSYEA--------AVKLAGG--KPVPVPLDEEENGFKPDLEDLEAAITP-KTKAIIL 169 (393)
T ss_pred HHHHHHHHhcCCCCEEEEeCCCCcCHHH--------HHHhcCC--EEEEEeCCcCccCCcCCHHHHHhhcCc-cceEEEE
Confidence 9999999999999999999998876642 2346666 444444432 3689999999999987 9999999
Q ss_pred cCCCCCC-----cCChHHHHHHHHHhCCEEEEeccccccccccCC-cCCCCC--C---CcEEEeCCCCcC--CCCCeeEE
Q 014724 258 GASAYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASV-VADPFK--Y---CDVVTTTTHKSL--RGPRGGMI 324 (419)
Q Consensus 258 ~~s~~p~-----~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~-~~~~~~--~---~Div~~S~hK~l--~GprgG~i 324 (419)
++||||| ...+++|+++|++||++||+|++ |.++++.+. +.+.++ . .-|+++|+||++ +|||.||+
T Consensus 170 n~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEi-Y~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~ 248 (393)
T COG0436 170 NSPNNPTGAVYSKEELKAIVELAREHDIIIISDEI-YEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWV 248 (393)
T ss_pred eCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehh-hhhcccCCCCcCCHhhcCCCcceEEEEecccccccccccceeEe
Confidence 9999996 23588999999999999999999 789998874 444443 2 237899999986 89999999
Q ss_pred EEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcC-hHHHHHHHHHHHHHHHHHHHHHhC-CcEEecCCC
Q 014724 325 FFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQS-PEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGS 402 (419)
Q Consensus 325 ~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~-~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~~~~t 402 (419)
+++++ ++.+.+.........+.+...+.++ ..||..-.. ...+..++...++++.+.+.|.+. |+++.....
T Consensus 249 v~~~~-----~l~~~~~~~~~~~~~~~~~~~Q~aa-~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~~~p~ 322 (393)
T COG0436 249 VGPPE-----ELIAALRKLKSYLTSCAPTPAQYAA-IAALNGPQSDEVVEEMREEYRERRDLLVEALNEIGGLSVVKPPE 322 (393)
T ss_pred ecChH-----HHHHHHHHHHHhcccCCCHHHHHHH-HHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccCCC
Confidence 99943 5666555322222233444444444 346654321 244666678999999999999987 598876334
Q ss_pred cceeEEEEeCCc
Q 014724 403 DNHLVLVDLRPM 414 (419)
Q Consensus 403 ~~hlv~vd~~~~ 414 (419)
....+|++++..
T Consensus 323 Ga~Y~~~~i~~~ 334 (393)
T COG0436 323 GAFYLFPKIPEL 334 (393)
T ss_pred eeEEEEeecCCC
Confidence 667899998764
No 12
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.95 E-value=3.6e-26 Score=220.28 Aligned_cols=286 Identities=20% Similarity=0.231 Sum_probs=213.3
Q ss_pred hcccccccC-CC-ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCC-CCCceeEecCCh-H
Q 014724 103 KSLELIASE-NF-TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDE-NKWGVNVQPLSG-S 178 (419)
Q Consensus 103 ~~i~L~~se-n~-~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~-~~~~v~V~~~sG-t 178 (419)
+.|.|...+ +| ++|.|++|+.+.+.+. ..|||. .. +++-+.++.|.++.++.+. ++| +.++.| .
T Consensus 26 DvlPmWVADMDf~~pp~i~~Al~~rvdhG-vfGY~~----~~----~~~~~ai~~w~~~r~~~~i~~e~---i~~~p~VV 93 (388)
T COG1168 26 DVLPMWVADMDFPTPPEIIEALRERVDHG-VFGYPY----GS----DELYAAIAHWFKQRHQWEIKPEW---IVFVPGVV 93 (388)
T ss_pred CcceeeeecccCCCCHHHHHHHHHHHhcC-CCCCCC----CC----HHHHHHHHHHHHHhcCCCCCcce---EEEcCcch
Confidence 556777666 55 7999999999998765 347773 22 2344466789999988886 355 455555 6
Q ss_pred HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEc
Q 014724 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG 258 (419)
Q Consensus 179 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~ 258 (419)
.++..++.++.+|||.|++..|.|..++ +.+...|+.+-..|+..+...+.||+++||+.+.+.++|++++|
T Consensus 94 pgi~~~I~~~T~~gd~Vvi~tPvY~PF~--------~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLC 165 (388)
T COG1168 94 PGISLAIRALTKPGDGVVIQTPVYPPFY--------NAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILC 165 (388)
T ss_pred HhHHHHHHHhCcCCCeeEecCCCchHHH--------HHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEe
Confidence 7999999999999999999999887654 24566777544444433333468899999999988788999999
Q ss_pred CCCCCC--c---CChHHHHHHHHHhCCEEEEeccccccccccCCcCCCC---C--CCc--EEEeCCCCcC--CCCCeeEE
Q 014724 259 ASAYPR--D---FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K--YCD--VVTTTTHKSL--RGPRGGMI 324 (419)
Q Consensus 259 ~s~~p~--~---~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~---~--~~D--iv~~S~hK~l--~GprgG~i 324 (419)
+|+||+ + .++.+|++||.+||++||+|++| +.++..|....++ . .+| +.+.|.+|+| +|.+++.+
T Consensus 166 nPHNP~Grvwt~eeL~~i~elc~kh~v~VISDEIH-aDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~ 244 (388)
T COG1168 166 NPHNPTGRVWTKEELRKIAELCLRHGVRVISDEIH-ADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYI 244 (388)
T ss_pred CCCCCCCccccHHHHHHHHHHHHHcCCEEEeeccc-ccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeE
Confidence 999994 3 36889999999999999999999 5777766322232 2 344 7788889997 78888887
Q ss_pred EEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC--CcEEecCCC
Q 014724 325 FFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLVSGGS 402 (419)
Q Consensus 325 ~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~--G~~v~~~~t 402 (419)
+..++ +++.+..+......+++|+.-.+.|..+|.++- .+.+++..+-+.+|++++.+.|++. |+++.. ..
T Consensus 245 Ii~n~-----~lr~~~~~~l~~~~~~~~n~lg~~A~~aAY~~G-~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~v~~-p~ 317 (388)
T COG1168 245 IISNR-----ELRAKFLKRLKRNGLHGPSALGIIATEAAYNQG-EPWLDELLEYLKDNRDYVADFLNKHLPGVKVTE-PQ 317 (388)
T ss_pred EecCH-----HHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEec-CC
Confidence 77664 565544433333445677776676666777764 3566888888999999999999985 888875 35
Q ss_pred cceeEEEEeCCccc
Q 014724 403 DNHLVLVDLRPMVT 416 (419)
Q Consensus 403 ~~hlv~vd~~~~~~ 416 (419)
.++|+|+|+|+++-
T Consensus 318 gTYL~WLD~r~l~l 331 (388)
T COG1168 318 GTYLAWLDCRELGL 331 (388)
T ss_pred CceeeeeeccccCC
Confidence 68999999999874
No 13
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.94 E-value=1.1e-24 Score=219.92 Aligned_cols=278 Identities=22% Similarity=0.258 Sum_probs=204.2
Q ss_pred CCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCCh-HHHHHHHHHHc--
Q 014724 112 NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-SPANFEVYTAI-- 188 (419)
Q Consensus 112 n~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sG-t~A~~~~~~al-- 188 (419)
...|..|++++..++.+.+. +.++..+.-.....+..+.+|+.+++++|+++. .+|.++.| |+|++.+..++
T Consensus 32 ~~~p~~V~~a~~~~~~~~~a--n~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~---~eIvft~~tT~aln~va~~l~~ 106 (405)
T COG0520 32 SQKPQAVLDAVAEYYRRYNA--NVHRGAHTLAEEATDLYEAAREAVARFLNADSS---DEIVFTRGTTEALNLVARGLGR 106 (405)
T ss_pred ccCCHHHHHHHHHHHHhhcC--CcCcccchHHHHHHHHHHHHHHHHHHHhCCCCC---CeEEEeCChhHHHHHHHHHhhh
Confidence 45799999999988755443 222111222233444555789999999999962 13666666 67999999988
Q ss_pred -cCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC--CCc
Q 014724 189 -LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY--PRD 265 (419)
Q Consensus 189 -l~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~--p~~ 265 (419)
+++||+|++.+.+|.++...|.+. ....|..++.++ ++ +++.+|.|.+++.+.+ ++|+|.+++.+| ++.
T Consensus 107 ~~~~gdeIv~s~~EH~sn~~pw~~~----~~~~Ga~v~~i~--~~-~~g~~~~~~~~~~i~~-~Tklvais~vSn~tG~~ 178 (405)
T COG0520 107 SLKPGDEIVVSDLEHHSNIVPWQEL----AKRTGAKVRVIP--LD-DDGLLDLDALEKLITP-KTKLVALSHVSNVTGTV 178 (405)
T ss_pred hhcCCCEEEEccCcchhhHHHHHHH----HHhcCcEEEEEe--cC-CCCCcCHHHHHHhcCC-CceEEEEECcccccccc
Confidence 799999999999998887655321 123466555555 55 5799999999998864 899999887554 468
Q ss_pred CChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcCCCCCe-eEEEEeCCCcchhhHHHHhhh
Q 014724 266 FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINN 342 (419)
Q Consensus 266 ~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~~ 342 (419)
.|+++|+++||++|+++++|++|+.|.. +..++ ++|++++|.||||.||.| |+++++++ +.+.+..
T Consensus 179 ~pv~~I~~la~~~ga~v~VDaaq~~~h~-----~idv~~l~~Df~afsgHKwl~gP~GiGvLy~r~~------~l~~l~P 247 (405)
T COG0520 179 NPVKEIAELAHEHGALVLVDAAQAAGHL-----PIDVQELGCDFLAFSGHKWLLGPTGIGVLYVRKE------LLEELEP 247 (405)
T ss_pred chHHHHHHHHHHcCCEEEEECccccCcc-----CCCchhcCCCEEEEcccccccCCCceEEEEEchH------HHhhcCC
Confidence 8999999999999999999999988754 33343 899999999999999987 99999884 4433311
Q ss_pred c---------------------ccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEEecC
Q 014724 343 A---------------------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSG 400 (419)
Q Consensus 343 ~---------------------~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~~~ 400 (419)
. ...+-.|+|+...+.++..|++.+..-++++..++..++++++.+.|++. |++++..
T Consensus 248 ~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~~~~L~~~~~v~i~g~ 327 (405)
T COG0520 248 FLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYLLEGLSELPGVEIYGP 327 (405)
T ss_pred cccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCeEEecC
Confidence 0 00112367777777778888888876677888999999999999999996 7888853
Q ss_pred CC--cceeEEEEeCC
Q 014724 401 GS--DNHLVLVDLRP 413 (419)
Q Consensus 401 ~t--~~hlv~vd~~~ 413 (419)
.. ...++-+++..
T Consensus 328 ~~~~r~~~vsF~v~~ 342 (405)
T COG0520 328 PDADRGGIVSFNVKG 342 (405)
T ss_pred CcccCceEEEEEeCC
Confidence 32 45556655544
No 14
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.93 E-value=2.5e-24 Score=211.17 Aligned_cols=257 Identities=20% Similarity=0.239 Sum_probs=194.6
Q ss_pred cCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCC-hHHHHHHHHHHc
Q 014724 110 SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLS-GSPANFEVYTAI 188 (419)
Q Consensus 110 sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~s-Gt~A~~~~~~al 188 (419)
..+++.|+|+++|..+++..| |+|.+-|..|.+....+| .+|+.+++++|+++. +|++|| ||+++++++.+.
T Consensus 9 ATTp~~~~v~~~m~~~~~~~f--gNPsS~H~~G~~A~~~ve-~AR~~iA~llga~~~----eIiFTSG~TEsnNlaI~g~ 81 (386)
T COG1104 9 ATTPVDPEVLEAMLPYLTEVF--GNPSSLHSFGREARKAVE-EAREQIAKLLGADPE----EIIFTSGATESNNLAIKGA 81 (386)
T ss_pred ccCCCCHHHHHHHHHHHHhhc--CCccchhHhHHHHHHHHH-HHHHHHHHHhCCCCC----eEEEecCCcHHHHHHHHhh
Confidence 346789999999999998765 788887777877767777 689999999999995 355565 589999888763
Q ss_pred --c----CCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC
Q 014724 189 --L----KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 262 (419)
Q Consensus 189 --l----~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~ 262 (419)
. +.|.+|+++..+|.+.+.... .+...| |++-.++++ .+|.+|+++|++++++ ++.+|.+.+.||
T Consensus 82 ~~a~~~~~~~~HIIts~iEH~aVl~~~~-----~Le~~g--~~Vtyl~V~-~~G~v~~e~L~~al~~-~T~LVSim~aNn 152 (386)
T COG1104 82 ALAYRNAQKGKHIITSAIEHPAVLNTCR-----YLERQG--FEVTYLPVD-SNGLVDLEQLEEALRP-DTILVSIMHANN 152 (386)
T ss_pred HHhhhcccCCCeEEEcccccHHHHHHHH-----HHHhcC--CeEEEeCCC-CCCeEcHHHHHHhcCC-CceEEEEEeccc
Confidence 2 257899999999887763221 111224 455555566 3899999999999985 678887766554
Q ss_pred --CCcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcCCCCCe-eEEEEeCCCcchhhHH
Q 014724 263 --PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELE 337 (419)
Q Consensus 263 --p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~ 337 (419)
++.+|+++|.++|+++|+++++|++|+.|.+ +.+++ ++|++++|.|| |.||+| |+++.+++. .+.
T Consensus 153 E~G~IQpI~ei~~i~k~~~i~fHvDAvQa~Gki-----pi~~~~~~vD~ls~SaHK-~~GpkGiGaLyv~~~~----~~~ 222 (386)
T COG1104 153 ETGTIQPIAEIGEICKERGILFHVDAVQAVGKI-----PIDLEELGVDLLSFSAHK-FGGPKGIGALYVRPGV----RLE 222 (386)
T ss_pred CeeecccHHHHHHHHHHcCCeEEEehhhhcCce-----eccccccCcceEEeehhh-ccCCCceEEEEECCCC----ccC
Confidence 6889999999999999999999999998855 33333 68999999999 789999 999886642 111
Q ss_pred HHhhh-cccCC-CCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC
Q 014724 338 SAINN-AVFPG-LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL 393 (419)
Q Consensus 338 ~~i~~-~~~~~-~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~ 393 (419)
..+.. ....+ -.|+.+.+.+++++.|++... ++++....++.+.+++|.+.|.+.
T Consensus 223 p~i~GGgQE~g~RsGTenv~~Ivg~~~A~~~a~-~~~~~~~~~~~~lr~~l~~~l~~~ 279 (386)
T COG1104 223 PLIHGGGQERGLRSGTENVPGIVGFGKAAEIAV-EELEEENARLRKLRDRLEDGLLEI 279 (386)
T ss_pred ceeccCcCCCCCCCCCccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhc
Confidence 11111 11111 135667888999999998876 567888899999999999999975
No 15
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.93 E-value=3.7e-24 Score=220.15 Aligned_cols=277 Identities=17% Similarity=0.229 Sum_probs=191.8
Q ss_pred hhcccccccCC---CChH----HHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEec
Q 014724 102 FKSLELIASEN---FTSR----AVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQP 174 (419)
Q Consensus 102 ~~~i~L~~sen---~~~~----~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~ 174 (419)
.+.|+|..++. +.++ ++.+++.+.+.... +.| ++...+.+|+ +.++++|+.+. + +.+
T Consensus 36 ~~~~~L~~g~p~~D~~tds~t~a~~~a~~~a~~~g~-~~Y------~~~~g~~~Lr----eaia~~~~~~~----v-v~t 99 (460)
T PRK13238 36 YNPFLLKSEDVFIDLLTDSGTGAMSDRQWAAMMRGD-EAY------AGSRSYYRLE----DAVKDIFGYPY----T-IPT 99 (460)
T ss_pred CCEEeCCCCCCCCCCCCCCCchhhhHHHHHHHHhCC-ccc------CCCCCHHHHH----HHHHHHhCCCc----E-EEC
Confidence 45677777663 4332 46777766664321 233 3334455676 46778888764 3 666
Q ss_pred CChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCC---------CCCCCCHHHHHH
Q 014724 175 LSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE---------STGLVDYDMLEK 245 (419)
Q Consensus 175 ~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~---------~~~~iD~d~Le~ 245 (419)
.+|+.|+.+++.++++||| |++++|.+..+.. .+...|.....++ +++ ..+.+|+++|++
T Consensus 100 ~ggt~A~~~~~~all~pGD-Vii~~p~~~~~~~--------~i~~~G~~~v~v~--~~~~~~~~~~~~f~g~id~e~Le~ 168 (460)
T PRK13238 100 HQGRAAEQILFPVLIKKGD-VVPSNYHFDTTRA--------HIELNGATAVDLV--IDEALDTGSRHPFKGNFDLEKLEA 168 (460)
T ss_pred CCHHHHHHHHHHHhCCCCC-EEccCCcccchHH--------HHHHcCCEEEEEe--ccccccccccccccCCcCHHHHHH
Confidence 7889999999999999999 8877664333221 2345566444433 432 134599999999
Q ss_pred Hhhh---cCCeEEEEcCCCCCC---c---CChHHHHHHHHHhCCEEEEecccccc-cccc-----CCcCCC--------C
Q 014724 246 TAIL---FRPKLIIAGASAYPR---D---FDYPRMRQIADAVGALLMMDMAHISG-LVAA-----SVVADP--------F 302 (419)
Q Consensus 246 ~l~~---~~pklIi~~~s~~p~---~---~dl~~I~~ia~~~ga~livD~ah~~G-l~~~-----g~~~~~--------~ 302 (419)
.+.+ .++|+|+++.|+||+ . .++++|+++|++||++||+|++|+.+ ..+. +..... .
T Consensus 169 ~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~ 248 (460)
T PRK13238 169 LIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMF 248 (460)
T ss_pred HHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhc
Confidence 9975 368899999998884 2 24689999999999999999998653 2221 111111 1
Q ss_pred CCCcEEEeCCCCcCCCCCeeEEEEeCCCcchhhHHHHhhhcccC--C--CCCCChHHHHHHHHHHHHHhcChHHHHHHHH
Q 014724 303 KYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFP--G--LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNK 378 (419)
Q Consensus 303 ~~~Div~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~~--~--~~g~p~~~~iaala~al~~~~~~~~~~~~~~ 378 (419)
.++|++++|++|.+.+|.||+++++++ ++.++++...+. + ++++.+...+.|++.++.+...+ .|.+.
T Consensus 249 s~~D~~~~Sg~K~g~~~~GG~i~~~d~-----~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~~~---~~~~~ 320 (460)
T PRK13238 249 SYADGLTMSAKKDAMVNIGGLLCFRDE-----DLFTECRTLCILYEGFPTYGGLAGRDMEALAVGLYEGMDE---DYLAY 320 (460)
T ss_pred ccCcEEEEecccCCCCcceeEEEcChH-----HHHHHhhhcccccCCcccccCcHHHHHHHHHhhHHHhhCh---HHHHH
Confidence 368999999999988999999999874 777777665322 2 45666667678888888876543 34444
Q ss_pred HHHHHHHHHHHHHhCCcEEecCCCcceeEEEEeCCc
Q 014724 379 VVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPM 414 (419)
Q Consensus 379 v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~vd~~~~ 414 (419)
..+++++|.+.|++.|++++. ....|.+++|++.+
T Consensus 321 ~~~~~~~l~~~L~~~G~~~~~-p~Gg~~v~~d~~~~ 355 (460)
T PRK13238 321 RIGQVEYLGEGLEEAGVPIQT-PAGGHAVFVDAGKF 355 (460)
T ss_pred HHHHHHHHHHHHHHCCCCeEc-cCCceEEEEEchhc
Confidence 555789999999999999885 35569999999875
No 16
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.93 E-value=1.6e-23 Score=208.84 Aligned_cols=261 Identities=17% Similarity=0.097 Sum_probs=187.0
Q ss_pred ccccccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHH
Q 014724 105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEV 184 (419)
Q Consensus 105 i~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~ 184 (419)
+++++++..+|++|++++.+.+... .++ . ..++.+.+++++++++|++..+ +.+.+.+|++|+..+
T Consensus 1 ~~~~~~~~~~~~~v~~a~~~~~~~~---~~~--------~-~~~~~~~~~~~la~~~g~~~~~--~~~~~~~~t~al~~~ 66 (356)
T cd06451 1 LLLIPGPSNVPPRVLKAMNRPMLGH---RSP--------E-FLALMDEILEGLRYVFQTENGL--TFLLSGSGTGAMEAA 66 (356)
T ss_pred CcccCCCcCCCHHHHHHhCCCccCC---CCH--------H-HHHHHHHHHHHHHHHhcCCCCC--EEEEecCcHHHHHHH
Confidence 4789999999999999997543211 111 1 1233335668899999995432 335566779999999
Q ss_pred HHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC-
Q 014724 185 YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP- 263 (419)
Q Consensus 185 ~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p- 263 (419)
+.+++++||+|++.++.|.++. .. ..+...|..+..+ +.++ ++.+|++++++.++++++++|++++++|+
T Consensus 67 ~~~~~~~g~~vl~~~~~~~~~~--~~----~~~~~~g~~~~~v--~~~~-~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~ 137 (356)
T cd06451 67 LSNLLEPGDKVLVGVNGVFGDR--WA----DMAERYGADVDVV--EKPW-GEAVSPEEIAEALEQHDIKAVTLTHNETST 137 (356)
T ss_pred HHHhCCCCCEEEEecCCchhHH--HH----HHHHHhCCCeEEe--ecCC-CCCCCHHHHHHHHhccCCCEEEEeccCCCc
Confidence 9999999999999887654421 00 1223456544444 4443 57899999999997558999988877765
Q ss_pred -CcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCC-C-CCcEEEeCCCCcCCCCCe-eEEEEeCCCcchhhHHHH
Q 014724 264 -RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-K-YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESA 339 (419)
Q Consensus 264 -~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~-~-~~Div~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~ 339 (419)
...|+++|.++|+++|+++++|++|..|.. +.++ . ++|++++|+||+|.+|.| |+++.++ ++.+.
T Consensus 138 G~~~~~~~i~~~a~~~~~~li~D~~~~~g~~-----~~~~~~~~~d~~~~s~~K~l~~p~g~G~l~~~~------~~~~~ 206 (356)
T cd06451 138 GVLNPLEGIGALAKKHDALLIVDAVSSLGGE-----PFRMDEWGVDVAYTGSQKALGAPPGLGPIAFSE------RALER 206 (356)
T ss_pred ccccCHHHHHHHHHhcCCEEEEeeehhccCc-----cccccccCccEEEecCchhccCCCCcceeEECH------HHHHH
Confidence 567999999999999999999999876632 1112 2 689999999999988876 9988877 45444
Q ss_pred hhh--ccc----------------CCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEec
Q 014724 340 INN--AVF----------------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS 399 (419)
Q Consensus 340 i~~--~~~----------------~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~ 399 (419)
+.. ... ....++++...++++..+++.+...++++..++..++++++.+.|++.|+++..
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 284 (356)
T cd06451 207 IKKKTKPKGFYFDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEALGLKLLA 284 (356)
T ss_pred HHhcCCCCceeecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeecc
Confidence 432 000 023345666666777777777665566788889999999999999999998864
No 17
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.93 E-value=1.2e-23 Score=204.70 Aligned_cols=306 Identities=20% Similarity=0.169 Sum_probs=206.1
Q ss_pred hccccccChhHHHHHHHHHHHhhhccc-ccccC-CC-ChHHHHHHHhhhhhccCC-CCCCCCCCCCchhHHHHHHHHHHH
Q 014724 80 DYSLGEADPEVCEIITKEKERQFKSLE-LIASE-NF-TSRAVMEAVGSCLTNKYS-EGLPGKRYYGGNEYIDELETLCQK 155 (419)
Q Consensus 80 ~~~l~~~~~~~~~~~~~e~~r~~~~i~-L~~se-n~-~~~~V~eal~~~l~~~y~-~g~p~~r~~~g~~~~~~lE~~~~~ 155 (419)
+++|....|.++..+..-.. +....+ |..|. ++ .|+.|.+++.......-. ..+++ | | ..++.+..++
T Consensus 9 ~~~l~~~~~~vw~e~~~la~-e~~~~~~LgqGfp~~~~P~fv~ea~~~~~~~~~~~qYt~~---~-G---~p~L~~aL~k 80 (420)
T KOG0257|consen 9 NRNLSTSKPYVWTEINRLAA-EHKVPNPLGQGFPDFPPPKFVTEAAKNAAKEPSTNQYTRG---Y-G---LPQLRKALAK 80 (420)
T ss_pred cccccccCCcHHHHHHHHHH-hcCCCCcccCCCCCCCCcHHHHHHHHHHhccchhcccccc---C-C---chHHHHHHHH
Confidence 56677888888776654332 223344 77665 44 688888888776543211 11122 2 2 2256666778
Q ss_pred HHHHHcCCCCCCCceeEecCCh-HHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEeccc---
Q 014724 156 RALAAFNLDENKWGVNVQPLSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL--- 231 (419)
Q Consensus 156 ~la~~~g~~~~~~~v~V~~~sG-t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~--- 231 (419)
.+++++|..... ..+|++|+| .+|+..++.+++++||+|++.+|.+.++.. .+.+.|.....++...
T Consensus 81 ~~se~~~~~~~~-~~eVlVT~GA~~ai~~~~~~l~~~GDeVii~eP~fd~Y~~--------~~~maG~tpv~v~~~~~~g 151 (420)
T KOG0257|consen 81 AYSEFYGGLLDP-DDEVLVTAGANEAISSALLGLLNPGDEVIVFEPFFDCYIP--------QVVMAGGTPVFVPLKPKEG 151 (420)
T ss_pred HHHHHhccccCC-cccEEEecCchHHHHHHHHHHcCCCCEEEEecCcchhhhh--------HHhhcCCcceeeccccccc
Confidence 888888765421 135778887 579999999999999999999998877643 3456676555555431
Q ss_pred --CCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC-----cCChHHHHHHHHHhCCEEEEeccccccccccCC-cCCC--
Q 014724 232 --DESTGLVDYDMLEKTAILFRPKLIIAGASAYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASV-VADP-- 301 (419)
Q Consensus 232 --~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~-----~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~-~~~~-- 301 (419)
...++.+|++++|.++.+ |+|+|++++|+||+ ...+++|++||++||.++|+|++ |.-+++.+. +...
T Consensus 152 ~~~s~~~~~D~~~le~~~t~-kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDev-Ye~~v~d~~~h~r~as 229 (420)
T KOG0257|consen 152 NVSSSDWTLDPEELESKITE-KTKAIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEV-YEWLVYDGNKHIRIAS 229 (420)
T ss_pred cccCccccCChHHHHhhccC-CccEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhH-hHHHhhCCCcceeeec
Confidence 124689999999999986 89999999999995 34689999999999999999999 455666553 2211
Q ss_pred CCC---CcEEEeCCCCcC--CCCCeeEEEEeCCCcchhhHHHHhhhcc--cCCCCCCChHHHHHHHHHHHHHh-cCh---
Q 014724 302 FKY---CDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAV--FPGLQGGPHNHTIGGLAVCLKHA-QSP--- 370 (419)
Q Consensus 302 ~~~---~Div~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~--~~~~~g~p~~~~iaala~al~~~-~~~--- 370 (419)
+++ ..+-++|++|+| +|||.||+++++ .+........ +-....+|...+. +.+.++.+. .++
T Consensus 230 lPgm~ertitvgS~gKtf~~TGWrlGW~igp~------~L~~~~~~vh~~~~~~~~Tp~q~A~-a~a~~~~~~~~~p~~~ 302 (420)
T KOG0257|consen 230 LPGMYERTITVGSFGKTFGVTGWRLGWAIGPK------HLYSALFPVHQNFVFTCPTPIQEAS-AAAFALELACLQPGGS 302 (420)
T ss_pred CCchhheEEEeccccceeeeeeeeeeeeechH------HhhhhHHHHhhccccccCcHHHHHH-HHHHhhhhhccCCcch
Confidence 232 357899999987 899999999965 3433322211 1111223322221 112222221 112
Q ss_pred HH-HHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeEEEEeC
Q 014724 371 EF-KVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 371 ~~-~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~vd~~ 412 (419)
++ ..+.+.++++++.|.+.|.+.|+++.. +....++|+|++
T Consensus 303 y~~~~~~~~y~~krdil~k~L~~lg~~v~~-p~gayyl~adfs 344 (420)
T KOG0257|consen 303 YFITELVKEYKEKRDILAKALEELGLKVTG-PEGAYYLWADFS 344 (420)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCcccc-CCCceEEEEecc
Confidence 23 347888999999999999999999875 467889999998
No 18
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.93 E-value=1.8e-23 Score=206.45 Aligned_cols=266 Identities=16% Similarity=0.122 Sum_probs=200.0
Q ss_pred cccccccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHH
Q 014724 104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 183 (419)
Q Consensus 104 ~i~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~ 183 (419)
.+.|+|++..+++.|++||.....++++ .+|...++ .+.+.++.+|+.+.. + +.++.+|||.|+++
T Consensus 6 ~~Ll~PGP~~v~~~V~~am~~~~~~h~s-----------~~F~~~~~-~~~~~L~~v~~t~~~-~-~~ll~gsGt~amEA 71 (383)
T COG0075 6 RLLLTPGPVPVPPRVLLAMARPMVGHRS-----------PDFVGIMK-EVLEKLRKVFGTENG-D-VVLLSGSGTLAMEA 71 (383)
T ss_pred ceeeeCCCCCCCHHHHHHhcCCCCCCCC-----------HHHHHHHH-HHHHHHHHHhcCCCC-c-EEEEcCCcHHHHHH
Confidence 4779999999999999999887655432 24455554 467889999999842 2 56777899999999
Q ss_pred HHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhc-CCeEEEE--cCC
Q 014724 184 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-RPKLIIA--GAS 260 (419)
Q Consensus 184 ~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~-~pklIi~--~~s 260 (419)
++.++++|||+||+... |.|.+++. ..+...|..+..+..+ ..-.+|++++++.+++. ..++|.+ +.+
T Consensus 72 av~sl~~pgdkVLv~~n---G~FG~R~~---~ia~~~g~~v~~~~~~---wg~~v~p~~v~~~L~~~~~~~~V~~vH~ET 142 (383)
T COG0075 72 AVASLVEPGDKVLVVVN---GKFGERFA---EIAERYGAEVVVLEVE---WGEAVDPEEVEEALDKDPDIKAVAVVHNET 142 (383)
T ss_pred HHHhccCCCCeEEEEeC---ChHHHHHH---HHHHHhCCceEEEeCC---CCCCCCHHHHHHHHhcCCCccEEEEEeccC
Confidence 99999999999999863 33333321 2234567655554432 34589999999999853 3566654 445
Q ss_pred CCCCcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcCCCCCe-eEEEEeCCCc------
Q 014724 261 AYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPV------ 331 (419)
Q Consensus 261 ~~p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l~Gprg-G~i~~~~~~~------ 331 (419)
+++...|+++|+++|++||+++|||+.-..|-. +..++ ++|+++++++|+|.+|.| |++..+++..
T Consensus 143 STGvlnpl~~I~~~~k~~g~l~iVDaVsS~Gg~-----~~~vd~wgiDv~itgSQK~l~~PPGla~v~~S~~a~e~~~~~ 217 (383)
T COG0075 143 STGVLNPLKEIAKAAKEHGALLIVDAVSSLGGE-----PLKVDEWGIDVAITGSQKALGAPPGLAFVAVSERALEAIEER 217 (383)
T ss_pred cccccCcHHHHHHHHHHcCCEEEEEecccCCCc-----ccchhhcCccEEEecCchhccCCCccceeEECHHHHHHHhcC
Confidence 566678999999999999999999998554522 33344 899999999999999999 8888887511
Q ss_pred --c-----hhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEec
Q 014724 332 --L-----GVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS 399 (419)
Q Consensus 332 --~-----~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~ 399 (419)
. +..+.+..+.. ..+..+|..+.+.|+..||+.++.++++.+++|+++++++++++++++||+++.
T Consensus 218 ~~~~~ylDL~~~~~~~~~~--~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~alGl~~~~ 290 (383)
T COG0075 218 KHPSFYLDLKKWLKYMEKK--GSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEALGLELFA 290 (383)
T ss_pred CCCceeecHHHHHHHHhhc--CCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCcccc
Confidence 0 12233333331 122346788999999999999998888999999999999999999999999886
No 19
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.92 E-value=3.6e-23 Score=210.11 Aligned_cols=262 Identities=16% Similarity=0.159 Sum_probs=192.2
Q ss_pred cccccccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHH
Q 014724 104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 183 (419)
Q Consensus 104 ~i~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~ 183 (419)
.+.+++++..++++|++++...+.++. +..+. ++-+.+++++++++|++.++ +.+++++|+.++..
T Consensus 10 ~~l~~pGP~~~~~~V~~a~~~~~~~~~-----------~~~~~-~~~~~~~~~l~~~~g~~~~~--~vi~~~~gt~a~~~ 75 (401)
T PLN02409 10 NHLFVPGPVNIPERVLRAMNRPNEDHR-----------SPAFP-ALTKELLEDVKYIFKTKSGT--PFIFPTTGTGAWES 75 (401)
T ss_pred ceeccCCCCCCCHHHHHHhcCCCCCCC-----------CHHHH-HHHHHHHHHHHHHhCCCCCC--EEEEeCCcHHHHHH
Confidence 356789999999999999976543211 12333 34446789999999997532 44677788899999
Q ss_pred HHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhh---cCCeEEEEcCC
Q 014724 184 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---FRPKLIIAGAS 260 (419)
Q Consensus 184 ~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~---~~pklIi~~~s 260 (419)
++.++++|||+|+++++.|.+.. +. ..+...|..+..++ .+. +..+|++++++.+++ .++|+|+++++
T Consensus 76 a~~~~~~~Gd~Vlv~~~~~~~~~---~~---~~~~~~g~~v~~v~--~~~-~~~~~~~~l~~~l~~~~~~~~k~v~~~~~ 146 (401)
T PLN02409 76 ALTNTLSPGDKVVSFRIGQFSLL---WI---DQMQRLNFDVDVVE--SPW-GQGADLDILKSKLRQDTNHKIKAVCVVHN 146 (401)
T ss_pred HHHhcCCCCCEEEEeCCCchhHH---HH---HHHHHcCCceEEEE--CCC-CCCCCHHHHHHHHhhCcCCCccEEEEEee
Confidence 99999999999999987654431 10 11234565444444 432 345899999999975 37899988876
Q ss_pred CCC--CcCChHHHHHH--HHHhCCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcCCCCCe-eEEEEeCCCcch
Q 014724 261 AYP--RDFDYPRMRQI--ADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLG 333 (419)
Q Consensus 261 ~~p--~~~dl~~I~~i--a~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l~Gprg-G~i~~~~~~~~~ 333 (419)
+|+ ...|+++|.++ |+++|+++++|++|+.|.. +..++ ++|++++|+||+|.||.| |+++.++
T Consensus 147 ~~~tG~~~~~~~i~~l~~~~~~g~~~vvD~v~s~g~~-----~id~~~~~~D~~~~s~~K~l~~P~G~G~l~~~~----- 216 (401)
T PLN02409 147 ETSTGVTNDLAGVRKLLDCAQHPALLLVDGVSSIGAL-----DFRMDEWGVDVALTGSQKALSLPTGLGIVCASP----- 216 (401)
T ss_pred cccccccCCHHHHHHHHhhhccCcEEEEEcccccCCc-----cccccccCccEEEEcCccccCcCCCcceeEECH-----
Confidence 655 57899999999 9999999999999876532 22233 789999999999988876 9998887
Q ss_pred hhHHHHhhhc-----cc----------CC--CCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcE
Q 014724 334 VELESAINNA-----VF----------PG--LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYK 396 (419)
Q Consensus 334 ~~l~~~i~~~-----~~----------~~--~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~ 396 (419)
++.+++... .+ .+ ..++|+...+.++..+++.+.+.+.++..+++.++++++.+.|++.|++
T Consensus 217 -~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~g~~ 295 (401)
T PLN02409 217 -KALEASKTAKSPRVFFDWADYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAWGLK 295 (401)
T ss_pred -HHHHHHhcCCCCCeecCHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCe
Confidence 344443221 00 01 1346777778888889988776677888999999999999999999999
Q ss_pred Eec
Q 014724 397 LVS 399 (419)
Q Consensus 397 v~~ 399 (419)
++.
T Consensus 296 ~~~ 298 (401)
T PLN02409 296 LCT 298 (401)
T ss_pred ecc
Confidence 875
No 20
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.92 E-value=8.7e-23 Score=207.13 Aligned_cols=282 Identities=20% Similarity=0.234 Sum_probs=196.9
Q ss_pred cccccc-cCCCChHHHHHHHhhhhhccCCCCCCCC-CCCCchhHHHHHHHHHHHHHHHHcCC-CCCCCceeEecCC-hHH
Q 014724 104 SLELIA-SENFTSRAVMEAVGSCLTNKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNL-DENKWGVNVQPLS-GSP 179 (419)
Q Consensus 104 ~i~L~~-sen~~~~~V~eal~~~l~~~y~~g~p~~-r~~~g~~~~~~lE~~~~~~la~~~g~-~~~~~~v~V~~~s-Gt~ 179 (419)
.+-|.. +..++|+.|++++...+.+.+ +++.. .+..+....+.++ .+++.+++++|+ +++ +|.+++ +++
T Consensus 20 ~~yld~a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~r~~la~~~g~~~~~----~i~~~~~~t~ 92 (401)
T PRK10874 20 GVYLDSAATALKPQAVIEATQQFYSLSA--GNVHRSQFAAAQRLTARYE-AAREQVAQLLNAPDAK----NIVWTRGTTE 92 (401)
T ss_pred eEEEeCCcccCCCHHHHHHHHHHHHhcc--CCCCCcccHHHHHHHHHHH-HHHHHHHHHcCCCCCC----EEEEECCHHH
Confidence 345543 446789999999988886543 34332 2223344445555 577899999999 443 355454 578
Q ss_pred HHHHHHHHc----cCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEE
Q 014724 180 ANFEVYTAI----LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLI 255 (419)
Q Consensus 180 A~~~~~~al----l~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklI 255 (419)
++..++.++ ++|||+|++++++|.+.+..+. ..+...|..+..++ .+ .++.+|++++++.+.+ ++++|
T Consensus 93 ~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~----~~~~~~g~~v~~v~--~~-~~~~~d~~~l~~~i~~-~t~lv 164 (401)
T PRK10874 93 SINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWL----MVAQQTGAKVVKLP--LG-ADRLPDVDLLPELITP-RTRIL 164 (401)
T ss_pred HHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHH----HHHHHhCCEEEEEe--cC-CCCcCCHHHHHHhcCc-CcEEE
Confidence 999998887 4899999999998876432111 11234565444444 44 3578999999999964 89999
Q ss_pred EEcCCCCC--CcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcCCCCCe-eEEEEeCCC
Q 014724 256 IAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDP 330 (419)
Q Consensus 256 i~~~s~~p--~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l~Gprg-G~i~~~~~~ 330 (419)
++++++|+ ...|+++|.++|+++|+++++|++|+.|.. +..+. ++|++++|+||. .||.| |+++.++
T Consensus 165 ~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g~~-----~~~~~~~~~d~~~~s~~K~-~gp~G~G~l~~~~-- 236 (401)
T PRK10874 165 ALGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVHF-----PADVQALDIDFYAFSGHKL-YGPTGIGVLYGKS-- 236 (401)
T ss_pred EEeCCcccccCcCCHHHHHHHHHHcCCEEEEECCcccccc-----cCCchhcCCCEEEEecccc-cCCCccEEEEEch--
Confidence 99988876 467999999999999999999999876643 11222 689999999995 47877 9988887
Q ss_pred cchhhHHHHhhhcc--------------------cCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHH
Q 014724 331 VLGVELESAINNAV--------------------FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRL 390 (419)
Q Consensus 331 ~~~~~l~~~i~~~~--------------------~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L 390 (419)
++.+.+.... .....|+|+...++++..|++.+.+.+..+..+++.++++++.+.|
T Consensus 237 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l~~~l~~~l 312 (401)
T PRK10874 237 ----ELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSRSLATLAEDAL 312 (401)
T ss_pred ----HHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 4444432111 0112367777778888888877655556677788888899999999
Q ss_pred HhC-CcEEecCCCcceeEEEEeCC
Q 014724 391 VEL-GYKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 391 ~~~-G~~v~~~~t~~hlv~vd~~~ 413 (419)
+++ |++++.. ..++++.+++..
T Consensus 313 ~~~~g~~~~~~-~~~~i~~~~~~~ 335 (401)
T PRK10874 313 AKLPGFRSFRC-QDSSLLAFDFAG 335 (401)
T ss_pred hcCCCEEEeCC-CCCcEEEEEECC
Confidence 886 8887642 345677777643
No 21
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.92 E-value=8.6e-23 Score=204.91 Aligned_cols=280 Identities=17% Similarity=0.151 Sum_probs=194.8
Q ss_pred ccCCCChHHHHHHHhhhhhccCCCCCCCCC-CCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHH
Q 014724 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKR-YYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTA 187 (419)
Q Consensus 109 ~sen~~~~~V~eal~~~l~~~y~~g~p~~r-~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~a 187 (419)
.+..++|+.+++++.+.+...+ ++|.+. +..+..+.+.+ ..+++++++++|++..+ ..++++++++|++.++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~la~~~~~~~~~--~v~~~~g~t~a~~~~~~~ 80 (373)
T cd06453 6 AATSQKPQPVIDAIVDYYRHYN--ANVHRGVHELSARATDAY-EAAREKVARFINAPSPD--EIIFTRNTTEAINLVAYG 80 (373)
T ss_pred ccccCCCHHHHHHHHHHHHhcC--CCCCCCccHHHHHHHHHH-HHHHHHHHHHhCCCCCC--eEEEeCCHHHHHHHHHHH
Confidence 3556789999999988875433 344331 12222333333 35678899999998321 124455567899999999
Q ss_pred ccC---CCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC-
Q 014724 188 ILK---PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP- 263 (419)
Q Consensus 188 ll~---pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p- 263 (419)
+.. |||+|++.+++|.+++.... ......|..+..++ .+ +++.+|++++++.+.+ ++++|++.+++|+
T Consensus 81 l~~~~~~g~~vl~~~~~~~~~~~~~~----~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~l~~-~~~~v~~~~~~~~t 152 (373)
T cd06453 81 LGRANKPGDEIVTSVMEHHSNIVPWQ----QLAERTGAKLKVVP--VD-DDGQLDLEALEKLLTE-RTKLVAVTHVSNVL 152 (373)
T ss_pred hhhcCCCCCEEEECcchhHHHHHHHH----HHHhhcCcEEEEee--cC-CCCCcCHHHHHHHhcC-CceEEEEeCccccc
Confidence 977 99999999988876531110 01124465444444 44 4678999999999975 8999999888876
Q ss_pred -CcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcCCCCCeeEEEEeCCCcchhhHHHHh
Q 014724 264 -RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAI 340 (419)
Q Consensus 264 -~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i 340 (419)
...|+++|.++|+++|++|++|++|..|.. +.++. ++|++++|+||++.+++.|+++.++ ++.+.+
T Consensus 153 G~~~~~~~i~~~~~~~~~~li~D~a~~~~~~-----~~~~~~~~~d~~~~s~~K~~~~~g~g~~~~~~------~~~~~~ 221 (373)
T cd06453 153 GTINPVKEIGEIAHEAGVPVLVDGAQSAGHM-----PVDVQDLGCDFLAFSGHKMLGPTGIGVLYGKE------ELLEEM 221 (373)
T ss_pred CCcCCHHHHHHHHHHcCCEEEEEhhhhcCce-----eeeccccCCCEEEeccccccCCCCcEEEEEch------HHhhcC
Confidence 467999999999999999999999876643 22232 7899999999999776679998887 344433
Q ss_pred hhcccC--------------------CCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEEec
Q 014724 341 NNAVFP--------------------GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVS 399 (419)
Q Consensus 341 ~~~~~~--------------------~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~~ 399 (419)
...... ...++|+...+.++..+++.+.+.+.++..+++.++++++.+.|++. |++++.
T Consensus 222 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 301 (373)
T cd06453 222 PPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYG 301 (373)
T ss_pred CCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeC
Confidence 321100 11245666667777778887765667888888899999999999987 788874
Q ss_pred C-CCcceeEEEEeC
Q 014724 400 G-GSDNHLVLVDLR 412 (419)
Q Consensus 400 ~-~t~~hlv~vd~~ 412 (419)
. ....+++.+++.
T Consensus 302 ~~~~~~~~~~~~~~ 315 (373)
T cd06453 302 DAEDRAGVVSFNLE 315 (373)
T ss_pred CccccCCeEEEEEC
Confidence 2 234667777764
No 22
>PLN00175 aminotransferase family protein; Provisional
Probab=99.92 E-value=2.8e-22 Score=204.41 Aligned_cols=305 Identities=15% Similarity=0.108 Sum_probs=205.5
Q ss_pred hhccccccChhHHHHHHHHHHHhhhcccccccC-CC-ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q 014724 79 VDYSLGEADPEVCEIITKEKERQFKSLELIASE-NF-TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKR 156 (419)
Q Consensus 79 ~~~~l~~~~~~~~~~~~~e~~r~~~~i~L~~se-n~-~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~ 156 (419)
+.+++..++++.+..+..... +.+.|+|..+. ++ +++.+++++.+.+... ...|+. ..|. .+|++.+.++
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~~G~P~~~~~~~~~~~~~~~~~~~-~~~Y~~---~~G~---~~Lr~aia~~ 103 (413)
T PLN00175 32 VAKRLEKFKTTIFTQMSSLAI-KHGAINLGQGFPNFDGPDFVKEAAIQAIRDG-KNQYAR---GFGV---PELNSAIAER 103 (413)
T ss_pred hhHHhhcCCCCHHHHHHHHhh-cCCeEecCCCCCCCCCCHHHHHHHHHHHhcC-CCCcCC---CCCC---HHHHHHHHHH
Confidence 456777788876655444322 34678888765 33 5788899988877542 123432 1232 3677777788
Q ss_pred HHHHcCCCCCCCceeEecCCh-HHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCC
Q 014724 157 ALAAFNLDENKWGVNVQPLSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDEST 235 (419)
Q Consensus 157 la~~~g~~~~~~~v~V~~~sG-t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~ 235 (419)
+.+.+|.+.+ +..+|++++| ++|+..++.++++|||+|++.+|.|..+.. .+...|. +++++++++++
T Consensus 104 ~~~~~g~~~~-~~~~I~vt~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~--------~~~~~g~--~~~~v~~~~~~ 172 (413)
T PLN00175 104 FKKDTGLVVD-PEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEA--------TLSMAGA--KIKTVTLRPPD 172 (413)
T ss_pred HHHHhCCCCC-CCCCEEEeCCHHHHHHHHHHHhCCCCCEEEEeCCCchhHHH--------HHHHcCC--EEEEEECCccc
Confidence 8887786532 1113666776 579999999999999999999998766531 2345565 44555555445
Q ss_pred CCCCHHHHHHHhhhcCCeEEEEcCCCCCCc--C---ChHHHHHHHHHhCCEEEEeccccccccccCCcCCC--CCC---C
Q 014724 236 GLVDYDMLEKTAILFRPKLIIAGASAYPRD--F---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADP--FKY---C 305 (419)
Q Consensus 236 ~~iD~d~Le~~l~~~~pklIi~~~s~~p~~--~---dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~--~~~---~ 305 (419)
+.+|+++|++.+.+ ++|+|++++|+||+- . ++++|.++|++||++||+|++| ..+.+.+...+. +++ .
T Consensus 173 ~~~~~~~l~~~~~~-~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y-~~l~~~~~~~s~~~~~~~~~~ 250 (413)
T PLN00175 173 FAVPEDELKAAFTS-KTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVY-DKLAFEGDHISMASLPGMYER 250 (413)
T ss_pred CCCCHHHHHHhcCc-CceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEeccc-CccccCCcccChhhCCCCcCc
Confidence 78999999999865 789999999999962 2 4788999999999999999995 555544322111 222 2
Q ss_pred cEEEeCCCCcC--CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHH
Q 014724 306 DVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNC 383 (419)
Q Consensus 306 Div~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~ 383 (419)
.|+++|++|+| +|+|.||+++++ ++.+.+.........+.+... ..+++.++... +..+++..+++.+++
T Consensus 251 vi~i~SfSK~~~~~G~RiG~~v~~~------~l~~~l~~~~~~~~~~~s~~~-Q~a~~~~l~~~-~~~~~~~~~~~~~~~ 322 (413)
T PLN00175 251 TVTMNSLGKTFSLTGWKIGWAIAPP------HLTWGVRQAHSFLTFATATPM-QWAAVAALRAP-ESYYEELKRDYSAKK 322 (413)
T ss_pred EEEEecchhhccCcchheeeeEeCH------HHHHHHHHHHhhccCCCCHHH-HHHHHHHHhCC-HHHHHHHHHHHHHHH
Confidence 47889999987 789999999987 566665543221112223332 22333344332 123567778888899
Q ss_pred HHHHHHHHhCCcEEecCCCcceeEEEEeCC
Q 014724 384 RALASRLVELGYKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 384 ~~l~~~L~~~G~~v~~~~t~~hlv~vd~~~ 413 (419)
+.+.+.|++.|+++.. ...++++|+++.+
T Consensus 323 ~~l~~~L~~~g~~~~~-p~g~~f~~~~~~~ 351 (413)
T PLN00175 323 DILVEGLKEVGFKVYP-SSGTYFVMVDHTP 351 (413)
T ss_pred HHHHHHHHHCCCeecC-CCeeEEEEEeccc
Confidence 9999999999988765 3456889999854
No 23
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.91 E-value=1.1e-22 Score=205.74 Aligned_cols=274 Identities=20% Similarity=0.259 Sum_probs=188.0
Q ss_pred hhcccccccC--CC-ChHHHHHHHhhhhhccCCCCCCCCCCCCch-hHHHHHHHHHHHHHHHHcCCCCCCCceeEecCCh
Q 014724 102 FKSLELIASE--NF-TSRAVMEAVGSCLTNKYSEGLPGKRYYGGN-EYIDELETLCQKRALAAFNLDENKWGVNVQPLSG 177 (419)
Q Consensus 102 ~~~i~L~~se--n~-~~~~V~eal~~~l~~~y~~g~p~~r~~~g~-~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sG 177 (419)
++.|++..++ .+ .+|+|++++...+.. |..+|+++++..|. +...++| +.+++++|.+. .++++||
T Consensus 38 ~~~i~~~~~~~lg~~~~~~v~~~~~~~~~~-~~~~~~~s~~~~G~~~~~~~le----~~ia~~~g~~~-----~ii~~~~ 107 (393)
T TIGR01822 38 REVLNFCANNYLGLSSHPDLIQAAKDALDE-HGFGMSSVRFICGTQDIHKELE----AKIAAFLGTED-----TILYASC 107 (393)
T ss_pred ceEEEeeCCCccccCCCHHHHHHHHHHHHH-hCCCCCCcCcccCChHHHHHHH----HHHHHHhCCCc-----EEEECch
Confidence 3456666554 12 378999999888854 44578888887774 3334444 67889999864 3667888
Q ss_pred HHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhh---c--CC
Q 014724 178 SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---F--RP 252 (419)
Q Consensus 178 t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~---~--~p 252 (419)
++|+..++.++++|||+|++.++.|.++.. .+...+. ..+.+ ..+|++++++.+++ . ++
T Consensus 108 ~~a~~~~~~~l~~~gd~vi~~~~~~~s~~~--------~~~~~~~--~~~~~------~~~d~~~l~~~i~~~~~~~~~~ 171 (393)
T TIGR01822 108 FDANGGLFETLLGAEDAIISDALNHASIID--------GVRLCKA--KRYRY------ANNDMADLEAQLKEARAAGARH 171 (393)
T ss_pred HHHHHHHHHHhCCCCCEEEEeccccHHHHH--------HHHhcCC--ceEEe------CCCCHHHHHHHHHhhhhcCCCc
Confidence 999999999999999999999998877542 1222332 22222 24899999998874 2 67
Q ss_pred eEEEEcCCCCC--CcCChHHHHHHHHHhCCEEEEeccccccccccCC---cC-CCC-CCCcEEEeCCCCcCCCCCeeEEE
Q 014724 253 KLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASV---VA-DPF-KYCDVVTTTTHKSLRGPRGGMIF 325 (419)
Q Consensus 253 klIi~~~s~~p--~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~---~~-~~~-~~~Div~~S~hK~l~GprgG~i~ 325 (419)
++|++++.+++ ...|+++|+++|++||++|++|++|..|...... .. ..+ +.+|++++|+||+++|+++|+++
T Consensus 172 ~~v~~~~v~~~tG~~~~l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l~g~r~G~~~ 251 (393)
T TIGR01822 172 RLIATDGVFSMDGVIAPLDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGTLGKALGGASGGFTT 251 (393)
T ss_pred eEEEEeCCccCCCCcCCHHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEEChHHhhCCCcEEEE
Confidence 78888765554 4579999999999999999999999777543211 00 111 25789999999999999999999
Q ss_pred EeCCCcchhhHHHHhhhcccCC-CCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcc
Q 014724 326 FKKDPVLGVELESAINNAVFPG-LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDN 404 (419)
Q Consensus 326 ~~~~~~~~~~l~~~i~~~~~~~-~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~ 404 (419)
+++ ++.+.+.....+. ..+++....+++...+++... +.++..+++.++++++.+.|++.|+++..+ +.
T Consensus 252 ~~~------~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~--~~ 321 (393)
T TIGR01822 252 ARK------EVVELLRQRSRPYLFSNSLPPAVVGASIKVLEMLE--ASNELRDRLWANTRYFRERMEAAGFDIKPA--DH 321 (393)
T ss_pred eCH------HHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHcCCCCCCC--CC
Confidence 887 5666665422222 223333444444445565442 245677888999999999999888876532 23
Q ss_pred eeEEEEe
Q 014724 405 HLVLVDL 411 (419)
Q Consensus 405 hlv~vd~ 411 (419)
.++.+.+
T Consensus 322 ~~~~i~~ 328 (393)
T TIGR01822 322 PIIPVML 328 (393)
T ss_pred CEEEEEe
Confidence 4454443
No 24
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.91 E-value=1.5e-22 Score=205.02 Aligned_cols=278 Identities=19% Similarity=0.205 Sum_probs=188.1
Q ss_pred ccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCC-hHHHHHHHHHH
Q 014724 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLS-GSPANFEVYTA 187 (419)
Q Consensus 109 ~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~s-Gt~A~~~~~~a 187 (419)
++...+|+.|++++.+.+.... ..++..|... ....++.+.+++.+++++|.+++ +|.+++ +++++..++.+
T Consensus 24 ~~~~~~p~~v~~a~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~l~~~ia~~~~~~~~----~v~~~~~~t~~l~~~~~~ 96 (397)
T TIGR01976 24 PAGTQIPQSVADAVSAALTRSN--ANRGGAYESS-RRADQVVDDAREAVADLLNADPP----EVVFGANATSLTFLLSRA 96 (397)
T ss_pred CccCCCCHHHHHHHHHHHHhcC--CCCCCCchHH-HHHHHHHHHHHHHHHHHcCCCCC----eEEEeCCHHHHHHHHHHH
Confidence 4556789999999988875432 1222112111 11223334567889999999864 244544 56677766655
Q ss_pred c---cCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC-
Q 014724 188 I---LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP- 263 (419)
Q Consensus 188 l---l~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p- 263 (419)
+ ++|||+|++++++|.+++..+. ..+...|..+ ..++++++++.+|++++++.+.+ ++++|++++++|+
T Consensus 97 ~~~~~~~gd~vl~~~~~~~s~~~~~~----~~~~~~g~~~--~~~~~~~~~~~~~~~~l~~~i~~-~~~lv~i~~~~n~t 169 (397)
T TIGR01976 97 ISRRWGPGDEVIVTRLDHEANISPWL----QAAERAGAKV--KWARVDEATGELHPDDLASLLSP-RTRLVAVTAASNTL 169 (397)
T ss_pred HHhcCCCCCEEEEcCCchHhHHHHHH----HHHHhcCCEE--EEEeccccCCCcCHHHHHHhcCC-CceEEEEeCCCCCC
Confidence 4 7899999999988876542110 0123456544 44445544678999999999864 7899999888876
Q ss_pred -CcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcCCCCCeeEEEEeCCCcchhhHHHHh
Q 014724 264 -RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAI 340 (419)
Q Consensus 264 -~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i 340 (419)
...|+++|.++|+++|+++++|++|+.|.. +..+. ++|++++|+||++ ||+.|+++.++ ++.+.+
T Consensus 170 G~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~-----~~~~~~~~~d~~~~s~~K~~-g~~~G~l~~~~------~~~~~l 237 (397)
T TIGR01976 170 GSIVDLAAITELVHAAGALVVVDAVHYAPHG-----LIDVQATGADFLTCSAYKFF-GPHMGILWGRP------ELLMNL 237 (397)
T ss_pred CccCCHHHHHHHHHHcCCEEEEehhhhcccc-----CCCHHHcCCCEEEEechhhc-CCceEEEEEcH------HHHhhC
Confidence 467999999999999999999999976522 11222 7899999999987 78899999887 454444
Q ss_pred hhcccC---------CCCCCChHHHHHHHHHHHHHhcChH--------------HHHHHHHHHHHHHHHHHHHHhCC-cE
Q 014724 341 NNAVFP---------GLQGGPHNHTIGGLAVCLKHAQSPE--------------FKVYQNKVVSNCRALASRLVELG-YK 396 (419)
Q Consensus 341 ~~~~~~---------~~~g~p~~~~iaala~al~~~~~~~--------------~~~~~~~v~~n~~~l~~~L~~~G-~~ 396 (419)
...... ...|+++...++++..|++.+...+ +++..++..+.++++.+.|++++ ++
T Consensus 238 ~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~ 317 (397)
T TIGR01976 238 PPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVT 317 (397)
T ss_pred CCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 321111 1235677777777777776654221 45566777888899999998875 88
Q ss_pred EecC---CCcceeEEEEeC
Q 014724 397 LVSG---GSDNHLVLVDLR 412 (419)
Q Consensus 397 v~~~---~t~~hlv~vd~~ 412 (419)
++.+ ...++++.+.+.
T Consensus 318 ~~~~~~~~~~~~~~~~~~~ 336 (397)
T TIGR01976 318 LYGVARLAARVPTVSFTVH 336 (397)
T ss_pred EeCCCCccCCCceEEEEeC
Confidence 8753 235677777664
No 25
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.91 E-value=1.6e-22 Score=204.41 Aligned_cols=276 Identities=12% Similarity=0.075 Sum_probs=180.1
Q ss_pred ccccccc--CCCChHHHHHHHhhhhhccCCCCCCCC-CCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHH
Q 014724 104 SLELIAS--ENFTSRAVMEAVGSCLTNKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 180 (419)
Q Consensus 104 ~i~L~~s--en~~~~~V~eal~~~l~~~y~~g~p~~-r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A 180 (419)
-|+|.+- -.++++++++|+.++.. .+ +.|.. .+..+......++ .+++.+++++|++. + +++++|++|
T Consensus 20 ~~~~~~~~~~~p~~~~~~~a~~~~~~-~~--~~~~~~~~~~~~~~~~~~~-~l~~~lA~~~g~~~----~-~~~~g~t~a 90 (387)
T PRK09331 20 FINLDPIQRGGILTPEARKALIEYGD-GY--SVCDYCPGRLDQIKKPPIA-DFHEDLAEFLGMDE----A-RVTHGAREG 90 (387)
T ss_pred ccccChhhcCCCCCHHHHHHHHHHHh-cc--CCCcccccccccccChHHH-HHHHHHHHHhCCCc----E-EEeCCHHHH
Confidence 3555543 35688999999988763 22 22221 1122211111222 34578899999975 3 456677889
Q ss_pred HHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccC-CCCCCCCHHHHHHHhhhc------CCe
Q 014724 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD-ESTGLVDYDMLEKTAILF------RPK 253 (419)
Q Consensus 181 ~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~-~~~~~iD~d~Le~~l~~~------~pk 253 (419)
+.+++.+++++||+|++..+.|.+.+. .+...|.. ++.++.+ .+++.+|++++++.+++. +++
T Consensus 91 ~~~al~~l~~~gd~Vlv~~~~h~s~~~--------~~~~~G~~--~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~ 160 (387)
T PRK09331 91 KFAVMHSLCKKGDYVVLDGLAHYTSYV--------AAERAGLN--VREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPA 160 (387)
T ss_pred HHHHHHHhcCCCCEEEECCCchHHHHH--------HHHHcCCE--EEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCE
Confidence 999999999999999999876655431 23445654 4444442 136789999999998753 689
Q ss_pred EEEEcCCCCC--CcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcCCCC-CeeEEEEeC
Q 014724 254 LIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGP-RGGMIFFKK 328 (419)
Q Consensus 254 lIi~~~s~~p--~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l~Gp-rgG~i~~~~ 328 (419)
+|++.+++++ ...|+++|+++|+++|+++++|++|+.|.. +.+.. ++|++++|+||++.+| ++|++++++
T Consensus 161 lV~l~~~~~~tG~~~~l~~I~~la~~~g~~livD~a~~~g~~-----~~~~~~~g~D~~~~s~~K~l~~~~~~G~l~~~~ 235 (387)
T PRK09331 161 LALLTHVDGNYGNLADAKKVAKVAHEYGIPFLLNGAYTVGRM-----PVDGKKLGADFIVGSGHKSMAASAPSGVLATTE 235 (387)
T ss_pred EEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCcccCCc-----CCCHHHcCCCEEEeeCcccccCCCCEEEEEECH
Confidence 9998887765 467999999999999999999999987643 11222 6899999999999665 569999887
Q ss_pred CCcchhhHHHHhhhcccCC-------CCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEEecC
Q 014724 329 DPVLGVELESAINNAVFPG-------LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSG 400 (419)
Q Consensus 329 ~~~~~~~l~~~i~~~~~~~-------~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~~~ 400 (419)
++.+.+.....++ +.++.......++..++..+. +.. ...++..++++++++.|.++ |++++..
T Consensus 236 ------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal~~~~-~~~-~~~~~~~~~~~~l~~~L~~l~g~~~~~~ 307 (387)
T PRK09331 236 ------EYADKVFRTSRKFGVKEVELLGCTLRGAPLVTLMASFPHVV-ERV-KRWDEEVKKARWFVDELEKIEGFKQLGE 307 (387)
T ss_pred ------HHHhhcccccCCCcccceeeeceecCchHHHHHHHHHHHHH-HHH-HHHHHHHHHHHHHHHHHhcCCCEEEecc
Confidence 4555443321111 111222122233333554443 222 34456678889999999998 9998842
Q ss_pred -CCcceeEEEEe
Q 014724 401 -GSDNHLVLVDL 411 (419)
Q Consensus 401 -~t~~hlv~vd~ 411 (419)
...++++.++.
T Consensus 308 ~~~~~~i~~~~~ 319 (387)
T PRK09331 308 KPRNHDLMKFET 319 (387)
T ss_pred CcCcCCeEEEeC
Confidence 23456666664
No 26
>PLN02651 cysteine desulfurase
Probab=99.91 E-value=1.2e-22 Score=203.53 Aligned_cols=276 Identities=16% Similarity=0.189 Sum_probs=192.0
Q ss_pred ccCCCChHHHHHHHhhhhhccCCCCCCCC-CCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHH
Q 014724 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTA 187 (419)
Q Consensus 109 ~sen~~~~~V~eal~~~l~~~y~~g~p~~-r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~a 187 (419)
++..++++.|++++...+.+.+ ++|+. .+..+.++.+.++ .+++.+++++|.+++ ..+++++||+|++.++.+
T Consensus 6 a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~r~~la~~~g~~~~---~v~~t~~~t~a~~~~l~~ 79 (364)
T PLN02651 6 QATTPIDPRVLDAMLPFLIEHF--GNPHSRTHLYGWESEDAVE-KARAQVAALIGADPK---EIIFTSGATESNNLAIKG 79 (364)
T ss_pred cCCCCCCHHHHHHHHHHHHhCC--CCCChhhhHHHHHHHHHHH-HHHHHHHHHhCCCCC---eEEEeCCHHHHHHHHHHH
Confidence 4556789999999998876544 44443 1222233334444 578999999999864 224445567888777655
Q ss_pred c----cCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC
Q 014724 188 I----LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP 263 (419)
Q Consensus 188 l----l~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p 263 (419)
+ .++||+|++.+.+|.++.... ..+...|. ++..++++ +++.+|++++++.+++ +++++++.+++|+
T Consensus 80 ~~~~~~~~g~~vl~~~~~h~s~~~~~-----~~~~~~g~--~v~~v~~~-~~~~~d~~~l~~~i~~-~t~lv~v~~~~n~ 150 (364)
T PLN02651 80 VMHFYKDKKKHVITTQTEHKCVLDSC-----RHLQQEGF--EVTYLPVK-SDGLVDLDELAAAIRP-DTALVSVMAVNNE 150 (364)
T ss_pred HHHhccCCCCEEEEcccccHHHHHHH-----HHHHhcCC--EEEEEccC-CCCcCCHHHHHHhcCC-CcEEEEEECCCCC
Confidence 4 578999999988776643211 11223354 44444444 4678999999999975 7899988877765
Q ss_pred --CcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcCCCCCe-eEEEEeCCCcchhhHHH
Q 014724 264 --RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELES 338 (419)
Q Consensus 264 --~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~ 338 (419)
...|+++|.++|+++|+++++|++|..|.. +..++ ++|++++|.||+ .||.| |+++.+++ ...
T Consensus 151 tG~~~~l~~I~~~~~~~g~~~~vD~a~~~g~~-----~~~~~~~~~D~~~~s~hK~-~gp~G~g~l~v~~~------~~~ 218 (364)
T PLN02651 151 IGVIQPVEEIGELCREKKVLFHTDAAQAVGKI-----PVDVDDLGVDLMSISGHKI-YGPKGVGALYVRRR------PRV 218 (364)
T ss_pred ceecccHHHHHHHHHHcCCEEEEEcchhhCCc-----ccCcccCCCCEEEechhhh-CCCCceEEEEEcCC------CCC
Confidence 468999999999999999999999987743 22233 799999999996 68987 99888874 112
Q ss_pred Hhhhcc------cCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHh-C-CcEEecC-CCc---cee
Q 014724 339 AINNAV------FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-L-GYKLVSG-GSD---NHL 406 (419)
Q Consensus 339 ~i~~~~------~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~-~-G~~v~~~-~t~---~hl 406 (419)
.+.... .....|+++...+.++..|++.+. .+.++..+++.+.++++.+.|++ . |++++.. ..+ .++
T Consensus 219 ~l~p~~~g~~~~~~~~~GT~~~~~~~~l~~al~~~~-~~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i 297 (364)
T PLN02651 219 RLEPLMSGGGQERGRRSGTENTPLVVGLGAACELAM-KEMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGT 297 (364)
T ss_pred CCCccccCCCccCCccCCCccHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCE
Confidence 221111 112357788888999998988876 35577788899999999999986 3 8988863 112 346
Q ss_pred EEEEeC
Q 014724 407 VLVDLR 412 (419)
Q Consensus 407 v~vd~~ 412 (419)
+.+.+.
T Consensus 298 ~~~~~~ 303 (364)
T PLN02651 298 LNLSFA 303 (364)
T ss_pred EEEEeC
Confidence 666653
No 27
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.91 E-value=2.5e-22 Score=201.71 Aligned_cols=282 Identities=20% Similarity=0.228 Sum_probs=197.8
Q ss_pred cccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHH
Q 014724 108 IASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTA 187 (419)
Q Consensus 108 ~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~a 187 (419)
.++..++|+.|++++...+.+.+..+..+ .+..+.++...++ .+++.+++++|+++++ ..+++.++|.|+..++.+
T Consensus 5 ~~~~~~~p~~v~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~r~~la~~lg~~~~~--~v~~~~~~t~a~~~~~~~ 80 (371)
T PF00266_consen 5 NAGTGPMPKSVLEAISDYLRNFYANPHSG-VSHRSREFAEILE-EAREALAKLLGAPPDE--EVVFTSNGTEALNAVASS 80 (371)
T ss_dssp TSSS-B-BHHHHHHHHHHHHHSGSSTSTS-SSTTSHHHHHHHH-HHHHHHHHHHTSSTTE--EEEEESSHHHHHHHHHHH
T ss_pred CCCccCCCHHHHHHHHHHHHHhhhcCccc-ccchhhhhhHHHH-HHHHHHHHhcCCcccc--ccccccccchhhhhhhhc
Confidence 35677899999999999887665332112 2223444555555 6889999999999821 224556677899999999
Q ss_pred c---cCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCC--CC
Q 014724 188 I---LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS--AY 262 (419)
Q Consensus 188 l---l~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s--~~ 262 (419)
+ +++||+|++.+.+|.+....+. ......|..++.++ .+ .++.+|++++++.+. .++++|++.+. .+
T Consensus 81 l~~~~~~g~~vl~~~~~~~s~~~~~~----~~~~~~g~~v~~i~--~~-~~~~~~~~~~~~~l~-~~~~lv~~~~~~~~t 152 (371)
T PF00266_consen 81 LLNPLKPGDEVLVTSNEHPSNRYPWE----EIAKRKGAEVRVIP--AD-PGGSLDLEDLEEALN-PDTRLVSISHVENST 152 (371)
T ss_dssp HHHHGTTTCEEEEEESSHHHHHHHHH----HHHHHTTEEEEEEE--EG-TTSSCSHHHHHHHHH-TTESEEEEESBETTT
T ss_pred cccccccccccccccccccccccccc----cccccchhhhcccc--cc-ccchhhhhhhhhhhc-cccceEEeecccccc
Confidence 9 8999999999887766542111 01124466555555 33 357899999999997 58999987664 34
Q ss_pred CCcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcCCCCCe-eEEEEeCCCcchhhHHHH
Q 014724 263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESA 339 (419)
Q Consensus 263 p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~ 339 (419)
+...|+++|.++||++|+++++|.+|+.|.+ +.+++ ++|++++|.|| |.||+| |+++.+++ ..++
T Consensus 153 G~~~pi~~I~~~~~~~~~~~~vD~~~~~g~~-----~id~~~~~~D~~~~s~~K-l~gp~G~g~l~v~~~------~~~~ 220 (371)
T PF00266_consen 153 GVRNPIEEIAKLAHEYGALLVVDAAQSAGCV-----PIDLDELGADFLVFSSHK-LGGPPGLGFLYVRPE------AIER 220 (371)
T ss_dssp TBBSSHHHHHHHHHHTTSEEEEE-TTTTTTS-----S--TTTTTESEEEEESTS-TTSSSTEEEEEEEHH------HHHH
T ss_pred cEEeeeceehhhhhccCCceeEechhccccc-----cccccccccceeeecccc-cCCCCchhhheehhh------hhhc
Confidence 6788999999999999999999999988754 33344 79999999999 999998 99999983 3333
Q ss_pred hhhcc--------------------cCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCc-EEe
Q 014724 340 INNAV--------------------FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGY-KLV 398 (419)
Q Consensus 340 i~~~~--------------------~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~-~v~ 398 (419)
++... .....|+++...+.++..+++.+...+.++..++..++++++.+.|.+.+. .++
T Consensus 221 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~ 300 (371)
T PF00266_consen 221 LRPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIEVL 300 (371)
T ss_dssp HHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEES
T ss_pred cccccccccccccccchhcccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeEe
Confidence 32111 111246788888888888988886556788899999999999999999754 553
Q ss_pred c---CCCcceeEEEEeCC
Q 014724 399 S---GGSDNHLVLVDLRP 413 (419)
Q Consensus 399 ~---~~t~~hlv~vd~~~ 413 (419)
. ......++.+.+..
T Consensus 301 ~~~~~~~~~~i~~~~~~~ 318 (371)
T PF00266_consen 301 GPDDEPRRPSIVSFNLPG 318 (371)
T ss_dssp SSSCGGBGTTEEEEEETT
T ss_pred eecccccccceEEEeecC
Confidence 3 12344566666643
No 28
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.91 E-value=3.2e-22 Score=202.86 Aligned_cols=280 Identities=19% Similarity=0.195 Sum_probs=193.5
Q ss_pred ccccc-cCCCChHHHHHHHhhhhhccCCCCCCCC-CCCCchhHHHHHHHHHHHHHHHHcCCC-CCCCceeEecC-ChHHH
Q 014724 105 LELIA-SENFTSRAVMEAVGSCLTNKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPL-SGSPA 180 (419)
Q Consensus 105 i~L~~-sen~~~~~V~eal~~~l~~~y~~g~p~~-r~~~g~~~~~~lE~~~~~~la~~~g~~-~~~~~v~V~~~-sGt~A 180 (419)
+-|.. +..++|+.|++++.+.+...+ +++.. .+..+.+....++ .+++.+++++|.+ ++ +|+++ ++|+|
T Consensus 18 iyld~a~~~~~p~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~r~~la~~~g~~~~~----~i~~t~g~t~~ 90 (398)
T TIGR03392 18 VYLDSAATALKPQAVIDATQQFYRLSS--GTVHRSQHQQAQSLTARYE-LARQQVARFLNAPDAE----NIVWTRGTTES 90 (398)
T ss_pred EEeeCccccCCCHHHHHHHHHHHHhcC--CCCCCcccHHHHHHHHHHH-HHHHHHHHHhCCCCCC----eEEEeCChHHH
Confidence 44543 446789999999988875433 33321 2223333334444 5788999999995 43 34444 55789
Q ss_pred HHHHHHHc----cCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEE
Q 014724 181 NFEVYTAI----LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLII 256 (419)
Q Consensus 181 ~~~~~~al----l~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi 256 (419)
+..++.++ ++|||+|++.+++|.+.+..+. ..+...|. +++.++++ .++.+|++++++++.+ ++++|+
T Consensus 91 l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~----~~~~~~g~--~v~~v~~~-~~~~~~~~~l~~~i~~-~t~lv~ 162 (398)
T TIGR03392 91 INLVAQSYARPRLQPGDEIIVSEAEHHANLIPWL----MVAQQTGA--KVVKLPIG-ADLLPDIRQLPELLTP-RTRILA 162 (398)
T ss_pred HHHHHHHhhhccCCCCCEEEECCcchhHHHHHHH----HHHHHcCc--EEEEEecC-CCCCcCHHHHHHHhcc-CceEEE
Confidence 99999887 5899999999998876432111 01234455 44444454 3577999999999865 789999
Q ss_pred EcCCCCC--CcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcCCCCCe-eEEEEeCCCc
Q 014724 257 AGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPV 331 (419)
Q Consensus 257 ~~~s~~p--~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l~Gprg-G~i~~~~~~~ 331 (419)
+++++|+ ...|+++|.++|+++|+++++|++|+.|.. +..+. ++|++++|+||.+ ||.| |+++.++
T Consensus 163 i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~-----~~~~~~~~~d~~~~s~~K~~-gp~G~G~l~~~~--- 233 (398)
T TIGR03392 163 LGQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQGVVHG-----PPDVQALDIDFYAFSGHKLY-GPTGIGVLYGKT--- 233 (398)
T ss_pred EECccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCC-----CCChhhcCCCEEEEeccccc-CCCceEEEEEcH---
Confidence 9888877 467999999999999999999999876533 11222 6899999999954 7776 9998877
Q ss_pred chhhHHHHhhhcc--------------------cCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHH
Q 014724 332 LGVELESAINNAV--------------------FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLV 391 (419)
Q Consensus 332 ~~~~l~~~i~~~~--------------------~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~ 391 (419)
++.+.+.... ...-.|+++...++++..|++.+.+.++++..++..+.++++.+.|+
T Consensus 234 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l~~~l~~~l~ 310 (398)
T TIGR03392 234 ---ELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLADLAEERLA 310 (398)
T ss_pred ---HHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHh
Confidence 4444432110 01124677777788888888776555567778888889999999998
Q ss_pred hC-CcEEecCCCcceeEEEEeC
Q 014724 392 EL-GYKLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 392 ~~-G~~v~~~~t~~hlv~vd~~ 412 (419)
++ |+++... ..++++.+.+.
T Consensus 311 ~l~g~~~~~~-~~~~i~~~~~~ 331 (398)
T TIGR03392 311 QLPGFRSFRC-PGSSLLAFDFA 331 (398)
T ss_pred cCCCeEEeCC-CCCcEEEEEeC
Confidence 86 8887642 34567766654
No 29
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.91 E-value=5.5e-22 Score=201.28 Aligned_cols=283 Identities=18% Similarity=0.190 Sum_probs=194.0
Q ss_pred ccccc-cCCCChHHHHHHHhhhhhccCCCCCCCC-CCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCC-hHHHH
Q 014724 105 LELIA-SENFTSRAVMEAVGSCLTNKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLS-GSPAN 181 (419)
Q Consensus 105 i~L~~-sen~~~~~V~eal~~~l~~~y~~g~p~~-r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~s-Gt~A~ 181 (419)
+-|.. +..++|+.|.+++.+.+...+ +++.. .++.+......++ .+++.+++++|.+..+ +|++++ +++|+
T Consensus 20 ~yld~~~~~~~p~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~r~~ia~~~~~~~~~---~v~~~~g~t~~l 93 (403)
T TIGR01979 20 VYLDSAATSQKPQQVIDAVAEYYRNSN--ANVHRGIHTLSVRATEAYE-AVREKVAKFINAASDE---EIVFTRGTTESI 93 (403)
T ss_pred EEEeCccccCCCHHHHHHHHHHHHhCC--CCCCCCccHHHHHHHHHHH-HHHHHHHHHhCcCCCC---eEEEeCCHHHHH
Confidence 44443 445789999999988776544 33322 1222323333444 5678899999998321 244444 56788
Q ss_pred HHHHHHc----cCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEE
Q 014724 182 FEVYTAI----LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIA 257 (419)
Q Consensus 182 ~~~~~al----l~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~ 257 (419)
..++.++ +++||+|++++++|.+.+..+. ......|..+..++ .+ +++.+|++++++.+.+ ++++|++
T Consensus 94 ~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~----~~~~~~g~~~~~v~--~~-~~~~~~~~~l~~~i~~-~~~lv~~ 165 (403)
T TIGR01979 94 NLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQ----LLAERTGATLKFIP--LD-DDGTLDLDDLEKLLTE-KTKLVAI 165 (403)
T ss_pred HHHHHHhhhhcCCCCCEEEECcchhhHHHHHHH----HHHHhcCcEEEEEe--cC-CCCCCCHHHHHHHhcc-CCeEEEE
Confidence 8887764 6899999999998877542211 11224565444444 44 4678999999999864 7999999
Q ss_pred cCCCCC--CcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcCCCCCe-eEEEEeCCCcc
Q 014724 258 GASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVL 332 (419)
Q Consensus 258 ~~s~~p--~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l~Gprg-G~i~~~~~~~~ 332 (419)
.+++|+ ...|+++|.++|+++|+++++|++|..|.. +..+. ++|++++|+||++ ||.| |+++.++
T Consensus 166 ~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~g~~-----~~~~~~~~~d~~~~s~~K~~-gp~G~g~l~~~~---- 235 (403)
T TIGR01979 166 THVSNVLGTVNPVEEIAKLAHQVGAKVLVDGAQAVPHM-----PVDVQALDCDFYVFSGHKMY-GPTGIGVLYGKE---- 235 (403)
T ss_pred EcccccccccCCHHHHHHHHHHcCCEEEEEchhhcCcc-----ccCccccCCCEEEEeccccc-CCCCceEEEEch----
Confidence 887775 578999999999999999999999977643 11222 6899999999966 7877 9988887
Q ss_pred hhhHHHHhhhcc--------------------cCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHh
Q 014724 333 GVELESAINNAV--------------------FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE 392 (419)
Q Consensus 333 ~~~l~~~i~~~~--------------------~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~ 392 (419)
++.+.+.... .....|+++...++++..+++.+...+.+++.+++.+.++++.+.|++
T Consensus 236 --~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~ 313 (403)
T TIGR01979 236 --ELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAYALERLGE 313 (403)
T ss_pred --HHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc
Confidence 3444332110 001235677777778888887765445678889999999999999988
Q ss_pred C-CcEEecCCC---cceeEEEEeCC
Q 014724 393 L-GYKLVSGGS---DNHLVLVDLRP 413 (419)
Q Consensus 393 ~-G~~v~~~~t---~~hlv~vd~~~ 413 (419)
. |++++.... ..+++.+.+..
T Consensus 314 ~~g~~~~~~~~~~~~~~~v~~~~~~ 338 (403)
T TIGR01979 314 IPGLRIYGPRDAEDRGGIISFNVEG 338 (403)
T ss_pred CCCEEEeCCCCccccCceEEEEeCC
Confidence 6 888875321 25677777643
No 30
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.91 E-value=4.9e-22 Score=202.05 Aligned_cols=281 Identities=16% Similarity=0.156 Sum_probs=195.0
Q ss_pred cccc-ccCCCChHHHHHHHhhhhhccCCCCCCCC-CCCCchhHHHHHHHHHHHHHHHHcCCC-CCCCceeEecCCh-HHH
Q 014724 105 LELI-ASENFTSRAVMEAVGSCLTNKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSG-SPA 180 (419)
Q Consensus 105 i~L~-~sen~~~~~V~eal~~~l~~~y~~g~p~~-r~~~g~~~~~~lE~~~~~~la~~~g~~-~~~~~v~V~~~sG-t~A 180 (419)
+-|. ++..++|+.|++++...+...+ +++.. .+..+....+.++ .+++.+++++|.. ++ +|++++| |++
T Consensus 25 iYld~a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~r~~la~~~~~~~~~----~v~~t~g~t~~ 97 (406)
T PRK09295 25 AYLDSAASAQKPSQVIDAEAEFYRHGY--AAVHRGIHTLSAQATEKME-NVRKQAALFINARSAE----ELVFVRGTTEG 97 (406)
T ss_pred EEEeCcccccCCHHHHHHHHHHHHhcC--CCCCCcccHHHHHHHHHHH-HHHHHHHHHcCcCCCC----eEEEeCCHHHH
Confidence 4444 3456789999999988876433 22211 2223444445565 4778999999984 43 3555555 679
Q ss_pred HHHHHHH----ccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEE
Q 014724 181 NFEVYTA----ILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLII 256 (419)
Q Consensus 181 ~~~~~~a----ll~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi 256 (419)
++.++.+ +++|||+|++.+++|.+.+..+. ......|..+. .++.+ .++.+|+++|++.+.+ ++++|+
T Consensus 98 l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~----~~~~~~g~~v~--~v~~~-~~~~~d~~~l~~~i~~-~t~lv~ 169 (406)
T PRK09295 98 INLVANSWGNSNVRAGDNIIISEMEHHANIVPWQ----MLCARVGAELR--VIPLN-PDGTLQLETLPALFDE-RTRLLA 169 (406)
T ss_pred HHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHH----HHHHHcCcEEE--EEecC-CCCCCCHHHHHHhcCC-CcEEEE
Confidence 8888876 46899999999988866432211 01123455444 44444 3578999999999864 789999
Q ss_pred EcCCCCC--CcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcCCCCCe-eEEEEeCCCc
Q 014724 257 AGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPV 331 (419)
Q Consensus 257 ~~~s~~p--~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l~Gprg-G~i~~~~~~~ 331 (419)
+++++|+ ...|+++|.++|+++|+++++|++|..|.. +.++. ++|++++|+|| +.||.| |+++.+++
T Consensus 170 l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~-----~~~~~~~~~D~~~~s~~K-~~gp~G~G~l~~~~~-- 241 (406)
T PRK09295 170 ITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMHH-----PVDVQALDCDFYVFSGHK-LYGPTGIGILYVKEA-- 241 (406)
T ss_pred EecchhcccccCCHHHHHHHHHHcCCEEEEEcccccCcc-----ccCchhcCCCEEEeehhh-ccCCCCcEEEEEchH--
Confidence 9988876 467999999999999999999999977643 22232 78999999999 557887 99988873
Q ss_pred chhhHHHHhhhcc---------------------cCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHH
Q 014724 332 LGVELESAINNAV---------------------FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRL 390 (419)
Q Consensus 332 ~~~~l~~~i~~~~---------------------~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L 390 (419)
+.+.+.... ...-.|+++...+.++..|++.+.+.+.+...++..+.++++.+.|
T Consensus 242 ----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l 317 (406)
T PRK09295 242 ----LLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQL 317 (406)
T ss_pred ----hHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 333221100 0112467788888888889888765567788888889999999999
Q ss_pred HhC-CcEEecCCCcceeEEEEeC
Q 014724 391 VEL-GYKLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 391 ~~~-G~~v~~~~t~~hlv~vd~~ 412 (419)
.+. |++++......+++.+.+.
T Consensus 318 ~~~~~~~~~~~~~~~~iv~~~~~ 340 (406)
T PRK09295 318 ESVPDLTLYGPQNRLGVIAFNLG 340 (406)
T ss_pred hcCCCEEEeCCCCCceEEEEEEC
Confidence 886 7888753223456666654
No 31
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.91 E-value=4.5e-22 Score=200.00 Aligned_cols=278 Identities=15% Similarity=0.135 Sum_probs=180.7
Q ss_pred hhcccccccC--CCChHHHHHHHhhhhhccCCCCCCCCCCCCchh---HHHHHHHHHHHHHHHHcCCCCCCCceeEecCC
Q 014724 102 FKSLELIASE--NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNE---YIDELETLCQKRALAAFNLDENKWGVNVQPLS 176 (419)
Q Consensus 102 ~~~i~L~~se--n~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~---~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~s 176 (419)
+..|+|.+-. ..+.+++.+++.+ |..|+.++|...|+. +...++ ..++.+++++|++. + +++++
T Consensus 6 ~~~~~~~~~~~~g~~~~~~~~a~~~-----~~~~~~~~~~~~g~~~~~~~~~~~-~~~e~lA~~~g~~~----~-~i~~g 74 (370)
T TIGR02539 6 RGSINLNPLQRGGVLTEAARKALVE-----FGDGYSVCDFCGGRLDQITKPPIH-DFLEDLAEFLGMDE----A-RVTHG 74 (370)
T ss_pred ccccccChhhhCCCCcHHHHHHHHH-----HhhccccccccccccccccchHHH-HHHHHHHHHhCCCc----e-EEECC
Confidence 3456666533 3456777777654 444566555544432 011222 22356899999986 3 44677
Q ss_pred hHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCC-CCCCCCHHHHHHHhhh------
Q 014724 177 GSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAIL------ 249 (419)
Q Consensus 177 Gt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~-~~~~iD~d~Le~~l~~------ 249 (419)
|++++..++.++++|||+|++..++|.+.+ . .+...|..+.. ++.+. .++.+|+++|++.+++
T Consensus 75 ~~~a~~~~~~~l~~~gd~Vl~~~~~h~s~~-~-------~~~~~g~~~~~--~~~~~~~~~~~d~~~l~~~l~~~~~~~~ 144 (370)
T TIGR02539 75 AREGKFAVMHALCKEGDWVVLDGLAHYTSY-V-------AAERAGLNVKE--VPHTGHPEYKVDPEGYGEVIEEVEDESG 144 (370)
T ss_pred hHHHHHHHHHHhhCCCCEEEECCcccHHHH-H-------HHHHcCCEEEE--EecCCcccCCcCHHHHHHHHHHhhhccC
Confidence 889999999999999999999888775543 1 23455654444 44442 3578999999999864
Q ss_pred cCCeEEEEcCCCCC--CcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC-CCcEEEeCCCCcCC-CCCeeEEE
Q 014724 250 FRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLR-GPRGGMIF 325 (419)
Q Consensus 250 ~~pklIi~~~s~~p--~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~-~~Div~~S~hK~l~-GprgG~i~ 325 (419)
.++++|++++++++ ...|+++|.++|+++|+++++|++|..|.... .... +.|++++|+||++. +.+.||++
T Consensus 145 ~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livDea~~~g~~~~----~~~~~~~di~v~s~sK~~~~~g~~G~l~ 220 (370)
T TIGR02539 145 KPPVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGRMPV----SAKEIGADFIVGSGHKSMAASGPCGVLG 220 (370)
T ss_pred CCcEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEECccccCCcCC----CHHHcCCCEEEeeCcccccCCCCEEEEE
Confidence 26789998888765 46789999999999999999999998763211 1112 68999999999984 34569999
Q ss_pred EeCCCcchhhHHHHhhhcccCCCC-------CCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEe
Q 014724 326 FKKDPVLGVELESAINNAVFPGLQ-------GGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLV 398 (419)
Q Consensus 326 ~~~~~~~~~~l~~~i~~~~~~~~~-------g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~ 398 (419)
+++ ++.+.+.....++.. +++......++..++.... +..+. ..+..+++++|++.|+++|++++
T Consensus 221 ~~~------~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~-~~l~~-~~~~~~~~~~l~~~L~~~g~~~~ 292 (370)
T TIGR02539 221 MSE------EWEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMMASFPHVV-ERVKR-WDEEVKKTRWFVAELEDIGFIQL 292 (370)
T ss_pred ECH------HHHhhhcccccCCccceeeeecccccccHHHHHHHHHHHHH-HHHHH-HHHHHHHHHHHHHHHHhCCcEEE
Confidence 887 566665543322111 1111112222233444322 22233 33445567789999999999875
Q ss_pred c-CCCcceeEEEEeC
Q 014724 399 S-GGSDNHLVLVDLR 412 (419)
Q Consensus 399 ~-~~t~~hlv~vd~~ 412 (419)
. ..+.++++++++.
T Consensus 293 ~~~~s~t~~v~~~~~ 307 (370)
T TIGR02539 293 GQKPKEHDLVKFETP 307 (370)
T ss_pred ccCCCcCceEEEECC
Confidence 2 3467889988864
No 32
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.90 E-value=2.6e-22 Score=199.84 Aligned_cols=271 Identities=24% Similarity=0.305 Sum_probs=200.1
Q ss_pred ccccccCCCC----hHHHHHHHhhhhhccCCCCCCCCCCCCchhHH-HHHHHHHHHHHHHHcCCCCCCCceeEecCChHH
Q 014724 105 LELIASENFT----SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYI-DELETLCQKRALAAFNLDENKWGVNVQPLSGSP 179 (419)
Q Consensus 105 i~L~~sen~~----~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~-~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~ 179 (419)
+++ +|+||+ +|.++++..+.+. +|..|.+++|...|+... .+|| +++++++|.+.. ++++||..
T Consensus 42 ~nf-~SNdYLGLa~~~~~~~a~~~~~~-~~g~g~~gsR~i~G~~~~h~~LE----~~lA~f~g~e~a-----l~f~SGy~ 110 (388)
T COG0156 42 LNF-CSNDYLGLASHPELIEAAKAAIR-RYGVGAGGSRLISGTSDLHVELE----EELADFLGAEAA-----LLFSSGFV 110 (388)
T ss_pred Eee-eccCcccccCCHHHHHHHHHHHH-HhCCCCCCcCcccCCcHHHHHHH----HHHHHHhCCCcE-----EEEcccch
Confidence 444 677886 7999999998885 466677888877776544 6777 678999999873 88999999
Q ss_pred HHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhc-----CCeE
Q 014724 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-----RPKL 254 (419)
Q Consensus 180 A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~-----~pkl 254 (419)
||..++.+|++++|.|+.....|.+.+. .++.++. +.+.|.+ .|+++||+++++. +.++
T Consensus 111 AN~~~i~~l~~~~dli~~D~lnHASiid--------G~rls~a--~~~~f~H------nD~~~Le~~l~~~~~~~~~~~~ 174 (388)
T COG0156 111 ANLGLLSALLKKGDLIFSDELNHASIID--------GIRLSRA--EVRRFKH------NDLDHLEALLEEARENGARRKL 174 (388)
T ss_pred hHHHHHHHhcCCCcEEEEechhhhhHHH--------HHHhCCC--cEEEecC------CCHHHHHHHHHhhhccCCCceE
Confidence 9999999999999999999998877542 2345554 4555543 6899999999763 2466
Q ss_pred EEEcC--CCCCCcCChHHHHHHHHHhCCEEEEeccccccccccCC--cCCCC--C--CCcEEEeCCCCcCCCCCeeEEEE
Q 014724 255 IIAGA--SAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASV--VADPF--K--YCDVVTTTTHKSLRGPRGGMIFF 326 (419)
Q Consensus 255 Ii~~~--s~~p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~--~~~~~--~--~~Div~~S~hK~l~GprgG~i~~ 326 (419)
|+++. |..+...|+++|.+++++||+++++|+||..|+.+... ...-+ . ..||+++|++|+| |--||++.+
T Consensus 175 IvtegVfSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAl-Gs~Gg~v~g 253 (388)
T COG0156 175 IVTEGVFSMDGDIAPLPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKAL-GSSGGYIAG 253 (388)
T ss_pred EEEeccccCCCCcCCHHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhh-cccCceeeC
Confidence 66653 44555678999999999999999999999999886421 11111 1 4589999999998 568899999
Q ss_pred eCCCcchhhHHHHhhhcccCCCCCCChHHH-HHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcce
Q 014724 327 KKDPVLGVELESAINNAVFPGLQGGPHNHT-IGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNH 405 (419)
Q Consensus 327 ~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~-iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~h 405 (419)
+. .+.+.+.....+++.++..+.. .++...+++.+. +..+.++++.++..++.+.+...|+.+. ++.++
T Consensus 254 ~~------~~~d~L~~~ar~~ifStalpP~~aaa~~~al~~l~--~~~~~r~~L~~~~~~~~~~~~~~~~~~~--~s~s~ 323 (388)
T COG0156 254 SA------ALIDYLRNRARPFIFSTALPPAVAAAALAALRILE--EGPERRERLQELAAFFRSLLKALGLVLL--PSESP 323 (388)
T ss_pred cH------HHHHHHHHhCCceeccCCCCHHHHHHHHHHHHHHH--hCHHHHHHHHHHHHHHHHHHHhcCCccC--CCCCC
Confidence 88 6777776554555444333333 334445666654 3467788899999999988887788763 36788
Q ss_pred eEEEEeCC
Q 014724 406 LVLVDLRP 413 (419)
Q Consensus 406 lv~vd~~~ 413 (419)
++.+-+..
T Consensus 324 I~pv~~gd 331 (388)
T COG0156 324 IIPVILGD 331 (388)
T ss_pred eeeeEeCC
Confidence 88776543
No 33
>PRK12414 putative aminotransferase; Provisional
Probab=99.90 E-value=1.2e-21 Score=197.91 Aligned_cols=301 Identities=16% Similarity=0.194 Sum_probs=196.0
Q ss_pred cccccChhHHHHHHHHHHHhhhcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q 014724 82 SLGEADPEVCEIITKEKERQFKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALA 159 (419)
Q Consensus 82 ~l~~~~~~~~~~~~~e~~r~~~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~ 159 (419)
++..+.+.++..+... ..+...|+|..+++. +++.+.+++.+.+.... ..|+. ..| ..++++.+++++++
T Consensus 10 ~~~~~~~~~~~~~~~~-~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~-~~Y~~---~~G---~~~lr~~ia~~l~~ 81 (384)
T PRK12414 10 KLPDVGTTIFTVIGQL-AAQHDALNLSQGAPNFAPDPALVEGVARAMRDGH-NQYAP---MAG---IAALREALAEKTER 81 (384)
T ss_pred hcccCCccHHHHHHHH-HHhCCeEEcCCCCCCCCCCHHHHHHHHHHHHhCC-CCcCC---CCC---cHHHHHHHHHHHHH
Confidence 3445555566554333 234567888887743 47888998887664321 23422 123 23666677888989
Q ss_pred HcCCCCCCCceeEecC-ChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCC
Q 014724 160 AFNLDENKWGVNVQPL-SGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLV 238 (419)
Q Consensus 160 ~~g~~~~~~~v~V~~~-sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~i 238 (419)
++|++.+.. .+|+.+ +|++|+..++.++++|||+|++++|+|..+.. .+...|. +.+.++++++++.+
T Consensus 82 ~~g~~~~~~-~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~~ 150 (384)
T PRK12414 82 LYGARYDPA-SEVTVIASASEGLYAAISALVHPGDEVIYFEPSFDSYAP--------IVRLQGA--TPVAIKLSPEDFRV 150 (384)
T ss_pred HhCCCCCCC-CcEEEECChHHHHHHHHHHhcCCCCEEEEeCCCccchHH--------HHHHcCC--EEEEEecCcccccc
Confidence 999863210 124444 45679999999999999999999998765421 1234455 45555555456789
Q ss_pred CHHHHHHHhhhcCCeEEEEcCCCCCCc-----CChHHHHHHHHHhCCEEEEeccccccccccCCcCCCC---CC---CcE
Q 014724 239 DYDMLEKTAILFRPKLIIAGASAYPRD-----FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KY---CDV 307 (419)
Q Consensus 239 D~d~Le~~l~~~~pklIi~~~s~~p~~-----~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~---~~---~Di 307 (419)
|++.|++.+++ ++|+|++++|+||+- .++++|.++|++||+++++|+++ ..+.+.+....++ +. .-+
T Consensus 151 d~~~l~~~l~~-~~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y-~~~~~~~~~~~~~~~~~~~~~~~i 228 (384)
T PRK12414 151 NWDEVAAAITP-RTRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVY-EHVVFDGARHHSMARHRELAERSV 228 (384)
T ss_pred CHHHHHhhcCc-ccEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhh-hhccCCCCCccCcccCcCccCcEE
Confidence 99999998864 789999999999853 36788999999999999999995 4445443211122 11 238
Q ss_pred EEeCCCCcC--CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHH
Q 014724 308 VTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRA 385 (419)
Q Consensus 308 v~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~ 385 (419)
++.|+||+| +|.|.||+++++ ++.+.+.........+.+... ..++..++.. ...+.+..+.+.++++.
T Consensus 229 ~~~SfSK~~~~pGlRiG~~v~~~------~l~~~l~~~~~~~~~~~s~~~-q~a~~~~l~~--~~~~~~~~~~~~~~r~~ 299 (384)
T PRK12414 229 IVSSFGKSYHVTGWRVGYCLAPA------ELMDEIRKVHQFMVFSADTPM-QHAFAEALAE--PASYLGLGAFYQRKRDL 299 (384)
T ss_pred EEecccccccCccceEEEEecCH------HHHHHHHHHHhheecCCCcHH-HHHHHHHhcC--ChHHHHHHHHHHHHHHH
Confidence 899999987 788999999987 566655543221111222222 2222323322 12234456677888999
Q ss_pred HHHHHHhCCcEEecCCCcceeEEEEeCC
Q 014724 386 LASRLVELGYKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 386 l~~~L~~~G~~v~~~~t~~hlv~vd~~~ 413 (419)
+.+.|++.|+++... ..+.++|+++++
T Consensus 300 l~~~L~~~g~~~~~~-~gg~~~~~~~~~ 326 (384)
T PRK12414 300 LARELAGSRFELLPS-EGSFFMLARFRH 326 (384)
T ss_pred HHHHHHhCCCeecCC-CcceEEEEcccc
Confidence 999999999887653 345668878764
No 34
>PRK08960 hypothetical protein; Provisional
Probab=99.90 E-value=1.1e-21 Score=198.34 Aligned_cols=284 Identities=13% Similarity=0.094 Sum_probs=185.5
Q ss_pred hhcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCCh-H
Q 014724 102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-S 178 (419)
Q Consensus 102 ~~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sG-t 178 (419)
.+.|.|..+++. +++.+++++.+.+.+.. .+|+.. .|. .++++.+.+++.+.+|.+.+. .+|++++| +
T Consensus 32 ~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~-~~Y~~~---~g~---~~lr~~ia~~~~~~~g~~~~~--~~i~it~G~~ 102 (387)
T PRK08960 32 HDVIHLEIGEPDFTTAEPIVAAGQAALAAGH-TRYTAA---RGL---PALREAIAGFYAQRYGVDVDP--ERILVTPGGS 102 (387)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhcCC-CccCCC---CCC---HHHHHHHHHHHHHHhCCCCCh--hhEEEccCcH
Confidence 455888877743 68999999988875421 133221 232 356666667776666654321 14666665 6
Q ss_pred HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCC-CCCCCHHHHHHHhhhcCCeEEEE
Q 014724 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIA 257 (419)
Q Consensus 179 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~-~~~iD~d~Le~~l~~~~pklIi~ 257 (419)
+|+..++.++++|||+|++++|+|.++.. .+...|..+..++ ++.+ ++.+|++.+++.+++ +++++++
T Consensus 103 ~al~~~~~~~~~~gd~vlv~~p~y~~~~~--------~~~~~g~~~~~v~--~~~~~~~~~d~~~l~~~~~~-~~~~i~i 171 (387)
T PRK08960 103 GALLLASSLLVDPGKHWLLADPGYPCNRH--------FLRLVEGAAQLVP--VGPDSRYQLTPALVERHWNA-DTVGALV 171 (387)
T ss_pred HHHHHHHHHhcCCCCEEEEcCCCCcchHH--------HHHhcCCeEEEEe--cCcccCCCCCHHHHHHHhCc-cceEEEE
Confidence 79999999999999999999999877642 1234455444444 4433 467999999998864 6788888
Q ss_pred cCCCCCC--cCC---hHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC-CCc-EEEeCCCCcC--CCCCeeEEEEeC
Q 014724 258 GASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCD-VVTTTTHKSL--RGPRGGMIFFKK 328 (419)
Q Consensus 258 ~~s~~p~--~~d---l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~-~~D-iv~~S~hK~l--~GprgG~i~~~~ 328 (419)
++|+||+ ..+ +++|+++|++||+++++|+++ .++.+.+...+.+. ..+ ++++|+||.| +|.|.||+++++
T Consensus 172 ~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y-~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~ 250 (387)
T PRK08960 172 ASPANPTGTLLSRDELAALSQALRARGGHLVVDEIY-HGLTYGVDAASVLEVDDDAFVLNSFSKYFGMTGWRLGWLVAPP 250 (387)
T ss_pred ECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccc-cccccCCCCCChhhccCCEEEEeecccccCCcccEEEEEEcCH
Confidence 8899985 333 567888899999999999995 45554332222222 223 7899999987 788999999987
Q ss_pred CCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeEE
Q 014724 329 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVL 408 (419)
Q Consensus 329 ~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~ 408 (419)
++.+.+.........+.+..... +...++........++..+++.++++.+.+.|++.|+.+........++|
T Consensus 251 ------~~~~~~~~~~~~~~~~~s~~~q~-a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~f~~ 323 (387)
T PRK08960 251 ------AAVPELEKLAQNLYISASTPAQH-AALACFEPETLAILEARRAEFARRRDFLLPALRELGFGIAVEPQGAFYLY 323 (387)
T ss_pred ------HHHHHHHHHHhhhccCCCHHHHH-HHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCcCCCeeEEEE
Confidence 56665544322222222222222 22334432111234566777888889999999998876532234567899
Q ss_pred EEeCC
Q 014724 409 VDLRP 413 (419)
Q Consensus 409 vd~~~ 413 (419)
+++..
T Consensus 324 ~~~~~ 328 (387)
T PRK08960 324 ADISA 328 (387)
T ss_pred Eeccc
Confidence 99864
No 35
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.90 E-value=6.4e-22 Score=197.37 Aligned_cols=264 Identities=20% Similarity=0.232 Sum_probs=185.8
Q ss_pred ccCCCChHHHHHHHhhhhhccCCCCCCCCCCC-CchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCCh-HHHHHHHHH
Q 014724 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYY-GGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-SPANFEVYT 186 (419)
Q Consensus 109 ~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~-~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sG-t~A~~~~~~ 186 (419)
++..++++.|++++.+.+.+.+ ++|+.+.+ .+....+.++ .+++++++++|++++ +|++++| ++|++.++.
T Consensus 5 a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~r~~la~~~g~~~~----~v~~~~g~t~a~~~~l~ 77 (353)
T TIGR03235 5 NATTPIDPAVAEAMLPWLLEEF--GNPSSRTHEFGHNAKKAVE-RARKQVAEALGADTE----EVIFTSGATESNNLAIL 77 (353)
T ss_pred CCCCCCCHHHHHHHHHHHHhcC--CCCCchhhHHHHHHHHHHH-HHHHHHHHHhCCCCC----eEEEeCCHHHHHHHHHH
Confidence 3456789999999998875433 45554321 1222223344 578899999999874 3555555 679998888
Q ss_pred Hcc----CCC-CEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCC
Q 014724 187 AIL----KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 261 (419)
Q Consensus 187 all----~pG-D~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~ 261 (419)
++. ++| |.|++...+|.++..... .+...|. +++.++.+ +++.+|++++++.+++ ++++|++.+++
T Consensus 78 ~l~~~~~~~g~~~vi~~~~~~~s~~~~~~-----~~~~~G~--~v~~v~~~-~~~~~d~~~l~~~l~~-~~~lv~~~~~~ 148 (353)
T TIGR03235 78 GLARAGEQKGKKHIITSAIEHPAVLEPIR-----ALERNGF--TVTYLPVD-ESGRIDVDELADAIRP-DTLLVSIMHVN 148 (353)
T ss_pred HHHHhcccCCCCeeeEcccccHHHHHHHH-----HHHhcCC--EEEEEccC-CCCcCCHHHHHHhCCC-CCEEEEEEccc
Confidence 875 356 788888877766542211 1223354 44455454 3678999999999864 78999888877
Q ss_pred CC--CcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcCCCCCe-eEEEEeCCCcchhhH
Q 014724 262 YP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVEL 336 (419)
Q Consensus 262 ~p--~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l~Gprg-G~i~~~~~~~~~~~l 336 (419)
|+ ...|+++|.++|+++|+++++|++|+.|.. +..++ ++|++++|+||++ ||.| |+++.+++.. .
T Consensus 149 n~tG~~~~~~~I~~l~~~~~~~~ivD~a~~~g~~-----~~~~~~~~~D~~~~s~~K~~-gp~g~g~l~~~~~~~----~ 218 (353)
T TIGR03235 149 NETGSIQPIREIAEVLEAHEAFFHVDAAQVVGKI-----TVDLSADRIDLISCSGHKIY-GPKGIGALVIRKRGK----P 218 (353)
T ss_pred CCceeccCHHHHHHHHHHcCCEEEEEchhhcCCc-----cccccccCCCEEEeehhhcC-CCCceEEEEEccCcc----c
Confidence 76 467999999999999999999999987754 22233 6999999999975 7876 8888887411 0
Q ss_pred HHHhhhcccC------CCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEec
Q 014724 337 ESAINNAVFP------GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS 399 (419)
Q Consensus 337 ~~~i~~~~~~------~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~ 399 (419)
...+....+. ...|+++...++++..+++.+. .+.++..+++.++++++.+.|++.|++++.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~~l~~~g~~~~~ 286 (353)
T TIGR03235 219 KAPLKPIMFGGGQERGLRPGTLPVHLIVGMGEAAEIAR-RNAQAWEVKLRAMRNQLRDALQTLGVKLNG 286 (353)
T ss_pred ccccCceeeCCCCcCccccCCCChHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHhccCCeEEeC
Confidence 0111111111 1245677788888888888765 466788899999999999999889999874
No 36
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.90 E-value=1.7e-21 Score=196.83 Aligned_cols=284 Identities=16% Similarity=0.125 Sum_probs=187.8
Q ss_pred hhcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChH-
Q 014724 102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS- 178 (419)
Q Consensus 102 ~~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt- 178 (419)
.+.|+|..+++. +++.+++++.+.+......+|+. ..|. .++.+.+.+++.+.+|.+.+ ...+|++++|+
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~---~~lr~aia~~~~~~~g~~~~-~~~~I~it~Gs~ 102 (388)
T PRK07366 30 KELIDLSLGSSDLPAPAHALEAIAQSLHDPSTHGYLL---FHGT---LDFREAAAQWYEQRFGLAVD-PETEVLPLIGSQ 102 (388)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhCcccCCCCC---CCCC---HHHHHHHHHHHHHhhCCcCC-CcCeEEECCCcH
Confidence 456888887753 47889999887664322223432 1233 35666677777777675432 11147777775
Q ss_pred HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCC-CCCCCHHHHHHHhhhcCCeEEEE
Q 014724 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIA 257 (419)
Q Consensus 179 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~-~~~iD~d~Le~~l~~~~pklIi~ 257 (419)
+|+..++.++++|||+|++.+|++..+.. .+...|. ++++++++++ ++.+|++++++.+.. ++|+|++
T Consensus 103 ~al~~~~~~l~~~gd~Vlv~~P~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~~~~-~~k~i~l 171 (388)
T PRK07366 103 EGTAHLPLAVLNPGDFALLLDPGYPSHAG--------GVYLAGG--QIYPMPLRAENDFLPVFADIPTEVLA-QARLMVL 171 (388)
T ss_pred HHHHHHHHHhCCCCCEEEEcCCCCcchHH--------HHHhcCC--EEEEEECCCccCCCCCHHHHHHhhcc-cceEEEE
Confidence 69999999999999999999998876642 2345565 4455555533 467899999887753 7899999
Q ss_pred cCCCCCCc--C---ChHHHHHHHHHhCCEEEEeccccccccccCC--cCCCC--C-CCc--EEEeCCCCcC--CCCCeeE
Q 014724 258 GASAYPRD--F---DYPRMRQIADAVGALLMMDMAHISGLVAASV--VADPF--K-YCD--VVTTTTHKSL--RGPRGGM 323 (419)
Q Consensus 258 ~~s~~p~~--~---dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~--~~~~~--~-~~D--iv~~S~hK~l--~GprgG~ 323 (419)
++|+||+- . .+++|.++|++||++||+|+++ ..+.+.+. .++.. + ..+ ++++|+||+| +|.|.||
T Consensus 172 ~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y-~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~ 250 (388)
T PRK07366 172 SYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPY-VDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGF 250 (388)
T ss_pred eCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecch-hhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcchhhee
Confidence 99999962 2 4677888999999999999994 55554432 12211 1 112 6789999987 7899999
Q ss_pred EEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCc
Q 014724 324 IFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSD 403 (419)
Q Consensus 324 i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~ 403 (419)
+++++ ++.+.+.........+.+.....++ ..++... .+.+++..+.+.++++.+.+.|++.|+.+.. ...
T Consensus 251 ~v~~~------~li~~l~~~~~~~~~~~~~~~~~~a-~~~l~~~-~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~-p~~ 321 (388)
T PRK07366 251 AIGNA------QLIQALRQVKAVVDFNQYRGILNGA-IAALTGP-QATVQQTVQIFRQRRDAFINALHQIGWPVPL-PEA 321 (388)
T ss_pred hcCCH------HHHHHHHHHHhhcccCCCHHHHHHH-HHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHCCCcccC-CCe
Confidence 99877 6766665433222122221112222 2233221 2335677888888999999999998886543 345
Q ss_pred ceeEEEEeCC
Q 014724 404 NHLVLVDLRP 413 (419)
Q Consensus 404 ~hlv~vd~~~ 413 (419)
..++|+++.+
T Consensus 322 g~f~~~~~~~ 331 (388)
T PRK07366 322 TMYVWAKLPE 331 (388)
T ss_pred eEEEEEECCc
Confidence 6789999864
No 37
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.90 E-value=1.7e-21 Score=195.63 Aligned_cols=280 Identities=19% Similarity=0.212 Sum_probs=186.6
Q ss_pred CChHHHHHHHhhhhhccCCCCCCCCCCC-CchhHHHHHHHHHHHHHHHHcCCCCCCCceeEec-CChHHHHHHHHHHccC
Q 014724 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYY-GGNEYIDELETLCQKRALAAFNLDENKWGVNVQP-LSGSPANFEVYTAILK 190 (419)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~g~p~~r~~-~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~-~sGt~A~~~~~~all~ 190 (419)
++|+.|++++.+.+.+.. +.++...| .+......+ +.+++++++++|.+..+ +|++ .++++++..++.++++
T Consensus 11 ~~p~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~la~~~~~~~~~---~v~~~~g~t~al~~~~~~~~~ 84 (376)
T TIGR01977 11 PKPDEVYEAMADFYKNYG--GSPGRGRYRLALRASREV-EETRQLLAKLFNAPSSA---HVVFTNNATTALNIALKGLLK 84 (376)
T ss_pred CCCHHHHHHHHHHHHhcC--CCCCcccchHHHHHHHHH-HHHHHHHHHHhCcCCCC---eEEEeCCHHHHHHHHHHhccC
Confidence 367899999988775421 11211111 111111222 34568899999987531 3444 4667899999999999
Q ss_pred CCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CcCCh
Q 014724 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDY 268 (419)
Q Consensus 191 pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p--~~~dl 268 (419)
+||+|++..++|+++..... ......|. +++.++.+ .++.+|++++++.+++ ++++|++++++|+ ...|+
T Consensus 85 ~gd~vl~~~~~~~~~~~~~~----~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~~~~-~~~~v~~~~~~n~tG~~~~~ 156 (376)
T TIGR01977 85 EGDHVITTPMEHNSVARPLE----CLKEQIGV--EITIVKCD-NEGLISPERIKRAIKT-NTKLIVVSHASNVTGTILPI 156 (376)
T ss_pred CCCEEEECcchhhHHHHHHH----HHHHHcCc--EEEEEecC-CCCCcCHHHHHHhcCC-CCeEEEEECCCCCccccCCH
Confidence 99999999887766531110 01122354 44444454 3578999999999864 7899998888776 46799
Q ss_pred HHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcCCCCCe-eEEEEeCCCcchhhHHH-H--hhh
Q 014724 269 PRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELES-A--INN 342 (419)
Q Consensus 269 ~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~-~--i~~ 342 (419)
++|.++|+++|+++++|++|+.|... ..+. ++|++++|+||++.||.| |+++.+++... ..+.. . ...
T Consensus 157 ~~i~~l~~~~~~~livD~a~~~g~~~-----~~~~~~~~D~~~~s~~K~l~~p~g~g~l~~~~~~~~-~~~~~~~~~~~~ 230 (376)
T TIGR01977 157 EEIGELAQENGIFFILDAAQTAGVIP-----IDMTELAIDMLAFTGHKGLLGPQGTGGLYIREGIKL-KPLKSGGTGSHS 230 (376)
T ss_pred HHHHHHHHHcCCEEEEEhhhccCccC-----CCchhcCCCEEEecccccccCCCCceEEEEcCCcCc-CceecCCCcccc
Confidence 99999999999999999999887542 1222 799999999999999987 77766654100 00000 0 000
Q ss_pred c--------ccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEEecC---CCcceeEEEE
Q 014724 343 A--------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSG---GSDNHLVLVD 410 (419)
Q Consensus 343 ~--------~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~~~---~t~~hlv~vd 410 (419)
. ...+..|+++...++++..+++.+.+.+.+...+++.++++++.+.|.+. |++++.. ....+++.+.
T Consensus 231 ~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~ 310 (376)
T TIGR01977 231 ALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVGVVSFT 310 (376)
T ss_pred ccccccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCCeEEEE
Confidence 0 00012356677778888888888876667888899999999999999874 7887742 1234567766
Q ss_pred eC
Q 014724 411 LR 412 (419)
Q Consensus 411 ~~ 412 (419)
+.
T Consensus 311 ~~ 312 (376)
T TIGR01977 311 VE 312 (376)
T ss_pred EC
Confidence 64
No 38
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.90 E-value=4.1e-21 Score=193.72 Aligned_cols=284 Identities=15% Similarity=0.109 Sum_probs=188.2
Q ss_pred hhcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCCh-H
Q 014724 102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-S 178 (419)
Q Consensus 102 ~~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sG-t 178 (419)
.+.++|..+++. +++.+++++.+.+.+....+|+. ..|. .++++.+++++.+.+|.+.+.. .+|++++| +
T Consensus 29 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~---~~lr~~ia~~~~~~~~~~~~~~-~~vi~t~G~~ 101 (383)
T TIGR03540 29 VDVISLGIGDPDLPTPKHIVEALCKAAENPENHRYPS---YEGM---LAYRQAVADWYKRRFGVELDPE-TEVLSLIGSK 101 (383)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC---CCCC---HHHHHHHHHHHHHhhCCCCCCC-CeEEECCCcH
Confidence 455777776643 57889999887664322224443 2232 3566677778877777753211 14667666 5
Q ss_pred HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCC-CCCCCHHHHHHHhhhcCCeEEEE
Q 014724 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIA 257 (419)
Q Consensus 179 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~-~~~iD~d~Le~~l~~~~pklIi~ 257 (419)
+|+..++.++++|||+|++++|++..+.. .+...|. ++++++++++ ++.+|++++++.+.+ ++|+|++
T Consensus 102 ~~l~~~~~~~~~~gd~vlv~~P~y~~~~~--------~~~~~G~--~v~~v~~~~~~g~~~d~~~l~~~~~~-~~~~v~i 170 (383)
T TIGR03540 102 EGIAHIPLAFVNPGDIVLVPDPGYPVYRI--------GTLFAGG--EPYEMPLKEENGFLPDFDAIPEDIAK-KAKLMFI 170 (383)
T ss_pred HHHHHHHHHhCCCCCEEEEeCCCCcchHH--------HHHhcCC--EEEEEecCcccCCccCHHHHHhhccc-cceEEEE
Confidence 79999999999999999999998766532 1234565 4555555543 456899999988864 7999999
Q ss_pred cCCCCCC--cCC---hHHHHHHHHHhCCEEEEeccccccccccCC-cCC--CCC---CCcEEEeCCCCcC--CCCCeeEE
Q 014724 258 GASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASV-VAD--PFK---YCDVVTTTTHKSL--RGPRGGMI 324 (419)
Q Consensus 258 ~~s~~p~--~~d---l~~I~~ia~~~ga~livD~ah~~Gl~~~g~-~~~--~~~---~~Div~~S~hK~l--~GprgG~i 324 (419)
++|+||+ ..+ +++|.++|++||++||+|+++ ..+.+.+. .++ .++ ...+++.|++|+| +|.|.||+
T Consensus 171 ~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y-~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~ 249 (383)
T TIGR03540 171 NYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAY-SEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMA 249 (383)
T ss_pred eCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecch-hhhccCCCCCcCcccCCCcccCEEEEEecccccCCccceeeEE
Confidence 9999995 334 688999999999999999995 44444331 111 122 1237789999987 68899999
Q ss_pred EEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcc
Q 014724 325 FFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDN 404 (419)
Q Consensus 325 ~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~ 404 (419)
+.++ ++.+++......... +++.....+...++... ....++..+++.++++.+.+.|++.|+.+... ..+
T Consensus 250 i~~~------~l~~~~~~~~~~~~~-~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~-~~~ 320 (383)
T TIGR03540 250 VGNA------DLIAGLGKVKTNVDS-GVFQAIQYAAIAALNGP-QDVVKEIRKIYQRRRDLLLEALKKIGIDVEKP-KAT 320 (383)
T ss_pred eCCH------HHHHHHHHHHHhccc-CCChHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHhCCCEecCC-Ccc
Confidence 9876 566665543221111 22222223333344332 23346667778889999999999999887653 346
Q ss_pred eeEEEEeCC
Q 014724 405 HLVLVDLRP 413 (419)
Q Consensus 405 hlv~vd~~~ 413 (419)
..+|+++.+
T Consensus 321 ~~~~~~l~~ 329 (383)
T TIGR03540 321 FYVWVPVPE 329 (383)
T ss_pred eEEEEECCC
Confidence 678998864
No 39
>PLN03032 serine decarboxylase; Provisional
Probab=99.90 E-value=6.8e-21 Score=190.45 Aligned_cols=273 Identities=18% Similarity=0.169 Sum_probs=190.3
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCC-CceeEecCChHHHHHHHHHHcc--C
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENK-WGVNVQPLSGSPANFEVYTAIL--K 190 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~-~~v~V~~~sGt~A~~~~~~all--~ 190 (419)
....+++++...+.+.+ |+|.+.+..|.. ..++|+.+++++++++|.++++ || +++++||+||+.++.+.. .
T Consensus 35 ~~~~~~~~~~~~~~~~~--gnP~s~~~~g~~-a~~~e~~v~~~ia~llg~~~~~~~G--~fTsGGTEaNl~al~~ar~~~ 109 (374)
T PLN03032 35 FDYGELSQLMKYSINNL--GDPFIESNYGVH-SRQFEVGVLDWFARLWELEKDEYWG--YITTCGTEGNLHGILVGREVF 109 (374)
T ss_pred cChHHHHHHHHhcccCC--CCCcccCCCCcc-HHHHHHHHHHHHHHHhCCCCccCCE--EEeCchHHHHHHHHHHHHHhC
Confidence 45567888888776654 677765544433 4678889999999999998765 43 566778999998876653 3
Q ss_pred CCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhc--CCeEEEE--cCCCCCCcC
Q 014724 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIA--GASAYPRDF 266 (419)
Q Consensus 191 pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~--~pklIi~--~~s~~p~~~ 266 (419)
++++|+++..+|.+.. +.+...+..+..++ ++ .++.+|+++|++.+++. +|.+|++ +++.++...
T Consensus 110 ~~~~vi~s~~~H~Sv~--------kaa~~lg~~~~~V~--~d-~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~id 178 (374)
T PLN03032 110 PDGILYASRESHYSVF--------KAARMYRMEAVKVP--TL-PSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVD 178 (374)
T ss_pred CCcEEEeCCCceeHHH--------HHHHHcCCCCeEee--eC-CCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCC
Confidence 5668888877776653 23445565555555 44 47899999999999753 4677766 444566789
Q ss_pred ChHHHHHHHHHhC-----CEEEEecccccccccc-CC-cCCCCC-CCcEEEeCCCCcCCCCCe-eEEEEeCCCcchhhHH
Q 014724 267 DYPRMRQIADAVG-----ALLMMDMAHISGLVAA-SV-VADPFK-YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELE 337 (419)
Q Consensus 267 dl~~I~~ia~~~g-----a~livD~ah~~Gl~~~-g~-~~~~~~-~~Div~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~ 337 (419)
|+++|+++|+++| +++++|+|++.+...- .. ....+. ++|.++.|.||.+..|.| |+++++++ +.
T Consensus 179 pi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~~~~vDSis~s~HK~~g~P~g~G~ll~r~~------~~ 252 (374)
T PLN03032 179 DLDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEVTFRKPIGSVSVSGHKFLGCPMPCGVALTRKK------HV 252 (374)
T ss_pred CHHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCCcccCCCcCCcEEEECcccccCCCcCeEEEEEEch------hh
Confidence 9999999999996 5999999986665421 11 011222 689999999997765987 99998874 33
Q ss_pred HHhhhc------ccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeEEE
Q 014724 338 SAINNA------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLV 409 (419)
Q Consensus 338 ~~i~~~------~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~v 409 (419)
+.+... ..+.+.|+..-...+++..+++....+++.+..++..+++++|.+.|++.|++++.. .....|.+
T Consensus 253 ~~~~~~~~Yl~~~d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~-p~~~~V~f 329 (374)
T PLN03032 253 KALSQNVEYLNSRDATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEAGLTCRLN-ELSSTVVF 329 (374)
T ss_pred HhhccCCcccCCCCCcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEC-CCceEEEE
Confidence 333210 112334554333344555677777777889999999999999999999999987653 33444443
No 40
>PRK02769 histidine decarboxylase; Provisional
Probab=99.90 E-value=7.4e-21 Score=191.19 Aligned_cols=271 Identities=17% Similarity=0.140 Sum_probs=188.0
Q ss_pred HHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCC-CceeEecCChHHHHHHHHHHc--cCCC
Q 014724 116 RAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENK-WGVNVQPLSGSPANFEVYTAI--LKPH 192 (419)
Q Consensus 116 ~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~-~~v~V~~~sGt~A~~~~~~al--l~pG 192 (419)
...++.+.....+.+ |+|.+.+..|.. ..++|+.+++++++++|+++++ || +++++||++|+.++.+. +.|+
T Consensus 36 ~~~~~~~~~~~~~n~--gnp~~~~~~g~~-~~~~e~~~~~~~a~l~g~~~~~~~G--~~TsGgTean~~a~~~ar~~~~~ 110 (380)
T PRK02769 36 YSALKRFFSFSINNC--GDPYSKSNYPLN-SFDFERDVMNFFAELFKIPFNESWG--YITNGGTEGNLYGCYLARELFPD 110 (380)
T ss_pred HHHHHHHHHhhhccC--CCccccCCCCCC-hHHHHHHHHHHHHHHhCCCCCCCCE--EEecChHHHHHHHHHHHHHhCCC
Confidence 344555555554443 555543332322 3578888999999999998643 43 45566789988776544 4678
Q ss_pred CEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhc--CCeEEEEcCCC--CCCcCCh
Q 014724 193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAGASA--YPRDFDY 268 (419)
Q Consensus 193 D~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~--~pklIi~~~s~--~p~~~dl 268 (419)
++|++++.+|.+.. +.+...|.....++ ++ +++.+|+++|++.+++. +|.+|++...+ ++...|+
T Consensus 111 ~~ii~s~~~H~Sv~--------ka~~~lg~~~~~V~--~~-~~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idpi 179 (380)
T PRK02769 111 GTLYYSKDTHYSVS--------KIARLLRIKSRVIT--SL-PNGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDNI 179 (380)
T ss_pred cEEEeCCCceehHH--------HHHHHcCCCCceec--cC-CCCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCCH
Confidence 99999988877653 23344555545555 34 36889999999999764 37887765544 4568899
Q ss_pred HHHHHHHHHhC---CEEEEeccccccccccCCcCCCCC---CCcEEEeCCCCcCCCCCe-eEEEEeCCCcchhhHHHHhh
Q 014724 269 PRMRQIADAVG---ALLMMDMAHISGLVAASVVADPFK---YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAIN 341 (419)
Q Consensus 269 ~~I~~ia~~~g---a~livD~ah~~Gl~~~g~~~~~~~---~~Div~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~ 341 (419)
++|+++|+++| +++++|+||+.+.+..-....+++ ++|.++.|.||++.+|.| |+++++++ ..+.+.
T Consensus 180 ~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~d~~~~vDsis~s~HK~~~~P~g~G~l~~r~~------~~~~~~ 253 (380)
T PRK02769 180 KEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPPFSFADGIDSIAISGHKFIGSPMPCGIVLAKKK------YVERIS 253 (380)
T ss_pred HHHHHHHHHhCCCceEEEEEecccceeecccCccccCCccCCCCEEEECCcccCCCCCCcEEEEEehh------hhhhcc
Confidence 99999999998 699999998766542111111232 799999999999888987 99988874 333321
Q ss_pred h------cccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeEEE
Q 014724 342 N------AVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLV 409 (419)
Q Consensus 342 ~------~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~v 409 (419)
. .....+.|+.+...++++..+++.+...++++..++..++++++.+.|++.|++++.. .....|.+
T Consensus 254 ~~~~yl~~~d~t~~GSR~g~~~l~lw~aL~~lg~~G~~~~~~~~~~la~~l~~~L~~~g~~~~~~-p~~~~v~f 326 (380)
T PRK02769 254 VDVDYIGSRDQTISGSRNGHTALLLWAAIRSLGSKGLRQRVQHCLDMAQYAVDRLQANGIPAWRN-PNSITVVF 326 (380)
T ss_pred cCccccCCCCCCccCCCCcHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEcC-CCceEEEE
Confidence 1 0112335666666677777888888777889999999999999999999999998753 34444544
No 41
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.89 E-value=2.9e-21 Score=193.38 Aligned_cols=261 Identities=15% Similarity=0.091 Sum_probs=180.3
Q ss_pred cccccccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHH
Q 014724 104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 183 (419)
Q Consensus 104 ~i~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~ 183 (419)
.+.|+|++..++++|++++.... .++ +.++...++ .+++.+++++|+++++. ..+++.|||.|++.
T Consensus 4 ~~l~~pgp~~~~~~v~~~~~~~~-~~~-----------~~~~~~~~~-~~r~~la~l~~~~~~~~-~i~~t~~~t~al~~ 69 (363)
T TIGR02326 4 YLLLTPGPLTTSRTVKEAMLFDW-CTW-----------DSDYNIVVE-QIRQQLLALATAEEGYT-SVLLQGSGTFAVEA 69 (363)
T ss_pred eeEecCCCCCCCHHHHHHhCCCC-CCC-----------ChHHHHHHH-HHHHHHHHHhCCCCCce-EEEEcCCCHHHHHH
Confidence 45688999999999999986543 111 234555555 57899999999975311 23556678999999
Q ss_pred HHHHccCCCCEEEEeCCCCCcc-ccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhc-CCeEEEEcCCC
Q 014724 184 VYTAILKPHDRIMGLDLPHGGH-LSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-RPKLIIAGASA 261 (419)
Q Consensus 184 ~~~all~pGD~Vl~~~~~~~g~-~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~-~pklIi~~~s~ 261 (419)
++.+++.+||++++..+.+.+. +. ..+...|..+..++ .+ +++.+|++++++.+++. +++++.+.+++
T Consensus 70 ~~~~l~~~~~~vlv~~~~~~~~~~~-------~~a~~~g~~~~~v~--~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~ 139 (363)
T TIGR02326 70 VIGSAVPKDGKLLVVINGAYGARIV-------QIAEYLGIPHHVVD--TG-EVEPPDVVEVEAILAADPAITHIALVHCE 139 (363)
T ss_pred HHHhcCCCCCeEEEEeCChhhHHHH-------HHHHHcCCceEEEe--CC-CCCCCCHHHHHHHHhhCCCccEEEEEeec
Confidence 9999999999877765432111 10 11234465444444 43 35789999999998753 45666655545
Q ss_pred C--CCcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcCCCCCe-eEEEEeCCCcchhhH
Q 014724 262 Y--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVEL 336 (419)
Q Consensus 262 ~--p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l~Gprg-G~i~~~~~~~~~~~l 336 (419)
+ +...|+++|.++|+++|+++++|++|..|.. +.++. ++|++++|+||+|.||.| |+++.+++ .
T Consensus 140 ~~tG~~~~i~~I~~l~~~~g~~livD~~~~~g~~-----~~~~~~~~~D~~~~s~~K~l~~p~G~G~l~~~~~------~ 208 (363)
T TIGR02326 140 TTTGILNPIEAVAKLAHRHGKVTIVDAMSSFGGI-----PIDIAELHIDYLISSANKCIQGVPGFGFVIARQA------E 208 (363)
T ss_pred CCccccCcHHHHHHHHHHcCCEEEEEccccccCc-----ccchhhcCccEEEecCccccccCCcceEEEECHH------H
Confidence 4 4578999999999999999999999876532 22233 689999999999988877 99999873 3
Q ss_pred HHHhhhcc----------------cCC-CCCCChHHHHHHHHHHHHHhcCh-HHHHHHHHHHHHHHHHHHHHHhCCcEEe
Q 014724 337 ESAINNAV----------------FPG-LQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVELGYKLV 398 (419)
Q Consensus 337 ~~~i~~~~----------------~~~-~~g~p~~~~iaala~al~~~~~~-~~~~~~~~v~~n~~~l~~~L~~~G~~v~ 398 (419)
.+++.... .++ ...++....+.++..+++.+... ++++..+++.++++++.+.|+++|++++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~g~~~~ 288 (363)
T TIGR02326 209 LAACKGNARSLSLDLYDQWRCMEDNHGKWRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRALGFEPL 288 (363)
T ss_pred HHHhhcCCCceeecHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCeec
Confidence 33221100 000 11134455666777778776544 3677889999999999999999999876
Q ss_pred c
Q 014724 399 S 399 (419)
Q Consensus 399 ~ 399 (419)
.
T Consensus 289 ~ 289 (363)
T TIGR02326 289 L 289 (363)
T ss_pred c
Confidence 4
No 42
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.89 E-value=5.1e-21 Score=194.86 Aligned_cols=296 Identities=16% Similarity=0.081 Sum_probs=195.1
Q ss_pred hhHHHHHHHHHHHh------hhcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q 014724 88 PEVCEIITKEKERQ------FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALA 159 (419)
Q Consensus 88 ~~~~~~~~~e~~r~------~~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~ 159 (419)
.+.+..+....++- ...|+|..+++. +++.+++++.+.+......+|+. .|. .++.+.+.+++.+
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~i~L~~g~p~~~~~~~~~~~l~~~~~~~~~~~Y~~----~G~---~~lr~aia~~~~~ 96 (410)
T PRK06290 24 IYKFEKIKRAKRAAKEKHPDMELIDMGVGEPDEMADESVVEVLCEEAKKPENRGYAD----NGI---QEFKEAAARYMEK 96 (410)
T ss_pred hhHHHHHHHHHHHHhhhcCCCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC----CCc---HHHHHHHHHHHHH
Confidence 33455555444433 235888887754 57888888876553221223442 233 3666677788877
Q ss_pred HcCCC-CCCCceeEecCChH-HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCC-CC
Q 014724 160 AFNLD-ENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TG 236 (419)
Q Consensus 160 ~~g~~-~~~~~v~V~~~sGt-~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~-~~ 236 (419)
.+|++ .+ ...+|++++|+ +|+..++.+++++||.|++++|.|.++.. .+...|. ++++++++++ ++
T Consensus 97 ~~g~~~~~-~~~~I~it~Gs~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~--------~~~~~g~--~v~~v~~~~~~~~ 165 (410)
T PRK06290 97 VFGVKDID-PVTEVIHSIGSKPALAMLPSCFINPGDVTLMTVPGYPVTGT--------HTKYYGG--EVYNLPLLEENNF 165 (410)
T ss_pred HcCCCcCC-CcceEEEccCHHHHHHHHHHHhCCCCCEEEEeCCCCccHHH--------HHHHcCC--EEEEEecCCCcCC
Confidence 77765 21 10147788886 68999999999999999999998766532 1234555 5555556543 46
Q ss_pred CCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCC---hHHHHHHHHHhCCEEEEeccccccccccCCcCCC--CC---CCc
Q 014724 237 LVDYDMLEKTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP--FK---YCD 306 (419)
Q Consensus 237 ~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~d---l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~--~~---~~D 306 (419)
.+|++++++.+.. ++|+|++++|+||+ ..+ +++|.++|++||++||+|+++ ..+.+.+...+. +. ..+
T Consensus 166 ~~d~~~l~~~~~~-~~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY-~~~~~~~~~~s~~~~~~~~~~~ 243 (410)
T PRK06290 166 LPDLDSIPKDIKE-KAKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAY-AALTFDGKPLSFLSVPGAKEVG 243 (410)
T ss_pred cCCHHHHHHhhcc-cceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecch-hhceeCCCCcChhcCCCccccE
Confidence 7899999988864 78999999999995 334 678888999999999999995 454443322121 11 245
Q ss_pred EEEeCCCCcC--CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHH
Q 014724 307 VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCR 384 (419)
Q Consensus 307 iv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~ 384 (419)
|++.|++|++ +|.|.||+++++ ++.+.+.........+.+... ..++..++.. .+..++..+++.++++
T Consensus 244 I~i~SfSK~~g~~GlRiG~ii~~~------~l~~~l~~~~~~~~~~~~~~~-q~aa~~~l~~--~~~~~~~~~~~~~~~~ 314 (410)
T PRK06290 244 VEIHSLSKAYNMTGWRLAFVVGNE------LIVKAFATVKDNNDSGQFIAI-QKAGIYALDH--PEITEKIREKYSRRLD 314 (410)
T ss_pred EEEeechhhcCCchhheEeEEeCH------HHHHHHHHHHhccccCCcHHH-HHHHHHHhhC--cHHHHHHHHHHHHHHH
Confidence 8999999987 788999999877 566666544333222222222 2222333432 1224667778888899
Q ss_pred HHHHHHHhCCcEEecCCCcceeEEEEeCC
Q 014724 385 ALASRLVELGYKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 385 ~l~~~L~~~G~~v~~~~t~~hlv~vd~~~ 413 (419)
.+.+.|++.|+.+... ..+.++|+++.+
T Consensus 315 ~l~~~L~~~g~~~~~p-~g~f~l~v~lp~ 342 (410)
T PRK06290 315 KLVKILNEVGFKAEMP-GGTFYLYVKAPK 342 (410)
T ss_pred HHHHHHHhCCCeecCC-CeeeEEEEECCC
Confidence 9999999999887642 345668888864
No 43
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.89 E-value=2.8e-21 Score=197.60 Aligned_cols=282 Identities=17% Similarity=0.144 Sum_probs=193.5
Q ss_pred ccccc-cCCCChHHHHHHHhhhhhccCCCCCCCC-CCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecC-ChHHHH
Q 014724 105 LELIA-SENFTSRAVMEAVGSCLTNKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPL-SGSPAN 181 (419)
Q Consensus 105 i~L~~-sen~~~~~V~eal~~~l~~~y~~g~p~~-r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~-sGt~A~ 181 (419)
+-|.. +..++|+.|++++...+...+ +++.. .++.+....+.++ .+++.+++++|++..+ +|+++ ++|+++
T Consensus 34 iyLd~a~~~~~p~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~r~~la~~~~~~~~~---~v~~t~g~t~al 107 (424)
T PLN02855 34 VYLDNAATSQKPAAVLDALQDYYEEYN--SNVHRGIHALSAKATDAYE-LARKKVAAFINASTSR---EIVFTRNATEAI 107 (424)
T ss_pred EEeeCccccCCCHHHHHHHHHHHHhcC--CCCCCccchHHHHHHHHHH-HHHHHHHHHcCCCCCC---EEEEeCCHHHHH
Confidence 44443 445688999999988775433 22221 2233333344454 5678999999996421 34455 457798
Q ss_pred HHHHHH----ccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEE
Q 014724 182 FEVYTA----ILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIA 257 (419)
Q Consensus 182 ~~~~~a----ll~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~ 257 (419)
..++.+ .++|||+|++.+++|.+.+..+. ......|.. ++.+++++ ++.+|++++++.+.+ ++++|++
T Consensus 108 ~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~----~~a~~~g~~--v~~v~~~~-~~~~~~~~l~~~i~~-~t~lv~i 179 (424)
T PLN02855 108 NLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQ----LVAQKTGAV--LKFVGLTP-DEVLDVEQLKELLSE-KTKLVAT 179 (424)
T ss_pred HHHHHHhhhhcCCCcCEEEECCCccHHHHHHHH----HHHHHcCCE--EEEEecCC-CCCcCHHHHHHHhcc-CceEEEE
Confidence 888765 46899999999998876542111 011234554 44444443 456999999999975 8999999
Q ss_pred cCCCCC--CcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcCCCCCe-eEEEEeCCCcc
Q 014724 258 GASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVL 332 (419)
Q Consensus 258 ~~s~~p--~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l~Gprg-G~i~~~~~~~~ 332 (419)
++++|+ ...|+++|.++|+++|+++++|++|+.|.. +.++. ++|++++|+|| +.||.| |+++.+++
T Consensus 180 ~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g~~-----~~~~~~~~~d~~~~s~~K-~~gp~G~G~l~~~~~--- 250 (424)
T PLN02855 180 HHVSNVLGSILPVEDIVHWAHAVGAKVLVDACQSVPHM-----PVDVQTLGADFLVASSHK-MCGPTGIGFLWGKSD--- 250 (424)
T ss_pred eCccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCc-----CCCchhcCCCEEEeeccc-ccCCCccEEEEEchh---
Confidence 988876 478999999999999999999999976643 22232 68999999999 568876 99998873
Q ss_pred hhhHHHHhhhcc--------------------cCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHh
Q 014724 333 GVELESAINNAV--------------------FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE 392 (419)
Q Consensus 333 ~~~l~~~i~~~~--------------------~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~ 392 (419)
+.+++.... ..+-.|++....++++..+++.+.+.+.++..+++.+.++++++.|++
T Consensus 251 ---~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~ 327 (424)
T PLN02855 251 ---LLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVELGTYLYEKLSS 327 (424)
T ss_pred ---hhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc
Confidence 333332110 001246777888888888888776557788889999999999999988
Q ss_pred C-CcEEecCC-----CcceeEEEEeC
Q 014724 393 L-GYKLVSGG-----SDNHLVLVDLR 412 (419)
Q Consensus 393 ~-G~~v~~~~-----t~~hlv~vd~~ 412 (419)
+ |++++... ...+++.+.+.
T Consensus 328 ~~g~~i~~~~~~~~~~r~~~v~~~~~ 353 (424)
T PLN02855 328 VPGVRIYGPKPSEGVGRAALCAFNVE 353 (424)
T ss_pred CCCEEEeCCCcccccCcccEEEEEEC
Confidence 6 89888531 12346666654
No 44
>PRK02948 cysteine desulfurase; Provisional
Probab=99.89 E-value=1.2e-21 Score=197.41 Aligned_cols=264 Identities=13% Similarity=0.139 Sum_probs=184.5
Q ss_pred ccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCCh-HHHHHHHHHH
Q 014724 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-SPANFEVYTA 187 (419)
Q Consensus 109 ~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sG-t~A~~~~~~a 187 (419)
++..++++.|++++.+.+...+ +.++..+..|....+.++ .+++.+++++|.+++ +|++++| ++++..++.+
T Consensus 7 a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~r~~la~~~g~~~~----~i~~~~g~t~a~~~~~~~ 79 (381)
T PRK02948 7 AATTPMSKEALQTYQKAASQYF--GNESSLHDIGGTASSLLQ-VCRKTFAEMIGGEEQ----GIYFTSGGTESNYLAIQS 79 (381)
T ss_pred CCCCCCCHHHHHHHHHHHHhcC--CCCccccHHHHHHHHHHH-HHHHHHHHHhCCCCC----eEEEeCcHHHHHHHHHHH
Confidence 3456789999999988776433 344444444444434444 678999999998764 3555555 7899888877
Q ss_pred cc----CCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC
Q 014724 188 IL----KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP 263 (419)
Q Consensus 188 ll----~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p 263 (419)
++ ++||+|++.+.+|.++.... ..+...|..+.. ++++ +++.+|+++|++.+++ ++++|++++++||
T Consensus 80 ~~~~~~~~g~~vv~~~~~h~s~~~~~-----~~~~~~g~~v~~--v~~~-~~~~~d~~~l~~~l~~-~~~lv~~~~~~n~ 150 (381)
T PRK02948 80 LLNALPQNKKHIITTPMEHASIHSYF-----QSLESQGYTVTE--IPVD-KSGLIRLVDLERAITP-DTVLASIQHANSE 150 (381)
T ss_pred HHHhccCCCCEEEECCcccHHHHHHH-----HHHHhCCCEEEE--EeeC-CCCCCCHHHHHHhcCC-CCEEEEEECCcCC
Confidence 75 67999999888776654221 112334554444 4444 3578999999999864 7899999988887
Q ss_pred --CcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcCCCCCe-eEEEEeCCCcchhhHHH
Q 014724 264 --RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELES 338 (419)
Q Consensus 264 --~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~ 338 (419)
...|+++|.++|+++|+++++|++|..|.. +..+. ++|++++|+||++ ||.| |+++.+++. .+..
T Consensus 151 tG~~~~~~~I~~l~~~~~~~vivD~~~~~g~~-----~~~~~~~~~d~~~~s~~K~~-gp~G~G~l~~~~~~----~~~~ 220 (381)
T PRK02948 151 IGTIQPIAEIGALLKKYNVLFHSDCVQTFGKL-----PIDVFEMGIDSLSVSAHKIY-GPKGVGAVYINPQV----RWKP 220 (381)
T ss_pred cEeehhHHHHHHHHHHcCCEEEEEChhhcccc-----ccCcccCCCCEEEecHHhcC-CCCcEEEEEEcCCC----CCCC
Confidence 467999999999999999999999877633 11122 6899999999965 7876 888887741 1110
Q ss_pred Hhh--hcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEec
Q 014724 339 AIN--NAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS 399 (419)
Q Consensus 339 ~i~--~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~ 399 (419)
... ........++++...++++..+++... ++.++..+++.++++++.+.|+++|+++..
T Consensus 221 ~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~v~~ 282 (381)
T PRK02948 221 VFPGTTHEKGFRPGTVNVPGIAAFLTAAENIL-KNMQEESLRFKELRSYFLEQIQTLPLPIEV 282 (381)
T ss_pred cccCCCCCCCcCCCCccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCCEEE
Confidence 000 000111235666677777777887764 356778899999999999999999987664
No 45
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.89 E-value=3.1e-21 Score=194.22 Aligned_cols=282 Identities=13% Similarity=0.073 Sum_probs=185.7
Q ss_pred hhcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcC--CCCCCCceeEecCC-
Q 014724 102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN--LDENKWGVNVQPLS- 176 (419)
Q Consensus 102 ~~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g--~~~~~~~v~V~~~s- 176 (419)
...|+|..+++. +++.+++++.+.+.+.. .+|+.. .|. .++++.+.+++.+.+| ++++ +|++++
T Consensus 24 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~-~~Y~~~---~G~---~~lr~~la~~~~~~~~~~~~~~----~i~~t~g 92 (382)
T PRK06108 24 EGVLPLWFGESDLPTPDFIRDAAAAALADGE-TFYTHN---LGI---PELREALARYVSRLHGVATPPE----RIAVTSS 92 (382)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHhcCC-CCCCCC---CCC---HHHHHHHHHHHHHHhCCCcCcc----eEEEeCC
Confidence 456888888753 57899999888765421 224321 232 3666677788888888 4443 345555
Q ss_pred hHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEE
Q 014724 177 GSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLII 256 (419)
Q Consensus 177 Gt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi 256 (419)
|++|+..++.++++|||+|++.+|+|..+.. .+...|..+..++++.+.+++.+|++++++.+.. ++++|+
T Consensus 93 ~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~--------~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~-~~~~i~ 163 (382)
T PRK06108 93 GVQALMLAAQALVGPGDEVVAVTPLWPNLVA--------APKILGARVVCVPLDFGGGGWTLDLDRLLAAITP-RTRALF 163 (382)
T ss_pred hHHHHHHHHHHhcCCCCEEEEeCCCccchHH--------HHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcCc-cceEEE
Confidence 5679999999999999999999998765531 2234565444444322123467999999998864 789999
Q ss_pred EcCCCCCCc--C---ChHHHHHHHHHhCCEEEEecccccccccc-C-CcCCCCC-----CCcEEEeCCCCcC--CCCCee
Q 014724 257 AGASAYPRD--F---DYPRMRQIADAVGALLMMDMAHISGLVAA-S-VVADPFK-----YCDVVTTTTHKSL--RGPRGG 322 (419)
Q Consensus 257 ~~~s~~p~~--~---dl~~I~~ia~~~ga~livD~ah~~Gl~~~-g-~~~~~~~-----~~Div~~S~hK~l--~GprgG 322 (419)
+++|+||+. . ++++|.++|+++|+++|+|++| .++.+. + ..++.+. ...++++|+||+| +|.|.|
T Consensus 164 l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y-~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG 242 (382)
T PRK06108 164 INSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVY-ERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLG 242 (382)
T ss_pred EECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhh-hhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCccccee
Confidence 989999852 2 4688999999999999999995 444433 1 1121111 2347899999986 688999
Q ss_pred EEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEEecCC
Q 014724 323 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGG 401 (419)
Q Consensus 323 ~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~~~~ 401 (419)
++++++ ++.+.+.........+.+.. ...+...++... ...+++..+++.++++++.+.|++. |+++..+
T Consensus 243 ~~~~~~------~~~~~~~~~~~~~~~~~~~~-~q~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p- 313 (382)
T PRK06108 243 WLVAPP------ALGQVLEKLIEYNTSCVAQF-VQRAAVAALDEG-EDFVAELVARLRRSRDHLVDALRALPGVEVAKP- 313 (382)
T ss_pred eeeCCH------HHHHHHHHHHHhcccCCChH-HHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCC-
Confidence 999987 56666554321111222222 222333344332 1234677888888999999999886 8877642
Q ss_pred CcceeEEEEeCC
Q 014724 402 SDNHLVLVDLRP 413 (419)
Q Consensus 402 t~~hlv~vd~~~ 413 (419)
....++|+++.+
T Consensus 314 ~~g~~~~~~l~~ 325 (382)
T PRK06108 314 DGAMYAFFRIPG 325 (382)
T ss_pred CeeEEEEEeCCC
Confidence 345678888754
No 46
>PRK07179 hypothetical protein; Provisional
Probab=99.89 E-value=3e-21 Score=196.36 Aligned_cols=267 Identities=20% Similarity=0.292 Sum_probs=186.2
Q ss_pred cccCCCC----hHHHHHHHhhhhhccCCCCCC-CCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHH
Q 014724 108 IASENFT----SRAVMEAVGSCLTNKYSEGLP-GKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF 182 (419)
Q Consensus 108 ~~sen~~----~~~V~eal~~~l~~~y~~g~p-~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~ 182 (419)
..|.+|+ +|+|++++.+.+.. |..+.. ++.+..|.+...++| +++++++|.+. + ++++||++||.
T Consensus 59 ~~~~~YL~l~~~p~v~~a~~~~~~~-~~~~~~~s~~~~~~~~~~~~le----~~la~~~g~~~----~-~~~~sG~~An~ 128 (407)
T PRK07179 59 LQSNDYLNLSGHPDIIKAQIAALQE-EGDSLVMSAVFLHDDSPKPQFE----KKLAAFTGFES----C-LLCQSGWAANV 128 (407)
T ss_pred eecCCccCCCCCHHHHHHHHHHHHH-hCCCCCccccccCCchHHHHHH----HHHHHHhCCCc----E-EEECCHHHHHH
Confidence 3567775 69999999998854 422221 334555545456666 57888999865 3 77889999999
Q ss_pred HHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC
Q 014724 183 EVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 262 (419)
Q Consensus 183 ~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~ 262 (419)
.++.++..+||.|++..+.|.+... .+...|. +..+++ .+|+++|++.+++.++++|+++++++
T Consensus 129 ~~l~~l~~~g~~v~~~~~~h~s~~~--------~~~~~g~--~~~~~~------~~d~~~l~~~l~~~~~~lV~v~~v~n 192 (407)
T PRK07179 129 GLLQTIADPNTPVYIDFFAHMSLWE--------GVRAAGA--QAHPFR------HNDVDHLRRQIERHGPGIIVVDSVYS 192 (407)
T ss_pred HHHHHhCCCCCEEEEECCcCHHHHH--------HHHHCCC--eEEEec------CCCHHHHHHHHHhcCCeEEEECCCCC
Confidence 9999999999999988776655431 1223333 444432 36999999999764688898888776
Q ss_pred C--CcCChHHHHHHHHHhCCEEEEecccccccccc-C--Cc-CCCCC-CCcEEEeCCCCcCCCCCeeEEEEeCCCcchhh
Q 014724 263 P--RDFDYPRMRQIADAVGALLMMDMAHISGLVAA-S--VV-ADPFK-YCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVE 335 (419)
Q Consensus 263 p--~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~-g--~~-~~~~~-~~Div~~S~hK~l~GprgG~i~~~~~~~~~~~ 335 (419)
+ ...|+++|.++|+++|++||+|++|..|..+. | .. ...+. .+|++++|+||+++ +++|++++++ +
T Consensus 193 ~tG~i~pl~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g-~~~G~l~~~~------~ 265 (407)
T PRK07179 193 TTGTIAPLADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFA-GRAGIITCPR------E 265 (407)
T ss_pred CCCccccHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhh-ccCeEEEeCH------H
Confidence 5 46799999999999999999999997664322 1 11 11121 56999999999985 5799999887 5
Q ss_pred HHHHhhhcccCCC-CCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeEEEEeC
Q 014724 336 LESAINNAVFPGL-QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 336 l~~~i~~~~~~~~-~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~vd~~ 412 (419)
+.+.+.....+.. .+++....++++..+++.+.. .+...+++.+++++|.+.|+++|+++.. ..+++++.+.
T Consensus 266 ~~~~~~~~~~~~~~~~t~~~~~~aa~~aal~~~~~--~~~~~~~l~~~~~~l~~~L~~~g~~v~~---~~~i~~l~~~ 338 (407)
T PRK07179 266 LAEYVPFVSYPAIFSSTLLPHEIAGLEATLEVIES--ADDRRARLHANARFLREGLSELGYNIRS---ESQIIALETG 338 (407)
T ss_pred HHHHHHHhCcCeeeCCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHcCCCCCC---CCCEEEEEeC
Confidence 6555544333332 234445556665556665532 3456788999999999999999987763 3577777653
No 47
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.89 E-value=5.3e-21 Score=194.09 Aligned_cols=283 Identities=14% Similarity=0.093 Sum_probs=186.8
Q ss_pred hhcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCCh-H
Q 014724 102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-S 178 (419)
Q Consensus 102 ~~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sG-t 178 (419)
...|+|..+++. +++.+++++.+.+......+|+. .|. .++.+.+.+++.+.+|.+.+. ..+|++++| +
T Consensus 32 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~y~~----~G~---~~lr~aia~~~~~~~g~~~~~-~~~I~it~G~~ 103 (399)
T PRK07681 32 HKMIDLSIGNPDMPPADFVREEMVHTANQKESYGYTL----SGI---QEFHEAVTEYYNNTHNVILNA-DKEVLLLMGSQ 103 (399)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhccccCCCCC----CCc---HHHHHHHHHHHHHHhCCCCCC-CCeEEECCCcH
Confidence 455888777653 57888999887664321113331 233 356666677777777764321 014667777 4
Q ss_pred HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCC-CCCCCHHHHHHHhhhcCCeEEEE
Q 014724 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIA 257 (419)
Q Consensus 179 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~-~~~iD~d~Le~~l~~~~pklIi~ 257 (419)
+|+..++.++++|||+|++++|.|..+.. .+...|. ++++++++++ ++.+|++++++.+.+ ++|+|++
T Consensus 104 ~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~--------~~~~~G~--~~~~v~~~~~~~~~~d~~~l~~~~~~-~~k~v~l 172 (399)
T PRK07681 104 DGLVHLPMVYANPGDIILVPDPGYTAYET--------GIQMAGA--TSYYMPLKKENDFLPDLELIPEEIAD-KAKMMIL 172 (399)
T ss_pred HHHHHHHHHhCCCCCEEEECCCCccchHH--------HHHhcCC--EEEEEecCCCCCCcCCHHHHHHhccc-cceEEEE
Confidence 69999999999999999999998876542 2334565 5555556543 467999999988854 7899999
Q ss_pred cCCCCCC--cCC---hHHHHHHHHHhCCEEEEeccccccccccCCcC-CC--CCC---CcEEEeCCCCcC--CCCCeeEE
Q 014724 258 GASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVA-DP--FKY---CDVVTTTTHKSL--RGPRGGMI 324 (419)
Q Consensus 258 ~~s~~p~--~~d---l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~-~~--~~~---~Div~~S~hK~l--~GprgG~i 324 (419)
++|+||+ ..+ +++|.++|+++|++||+|++| ..+.+.+... +. ++. ..|+++|+||+| +|.|.||+
T Consensus 173 ~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y-~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~ 251 (399)
T PRK07681 173 NFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAY-AEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYM 251 (399)
T ss_pred eCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccc-hhheeCCCCCCChhhCCCCcccEEEEeecccccCCccceeEEE
Confidence 9999995 333 678999999999999999995 4555443211 11 121 247899999987 78899999
Q ss_pred EEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcc
Q 014724 325 FFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDN 404 (419)
Q Consensus 325 ~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~ 404 (419)
+.++ ++.+.+.........+.+... ..++..++... .+.+++..+++.++++.+.+.|++.|+++.. ....
T Consensus 252 i~~~------~l~~~~~~~~~~~~~~~s~~~-q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-p~~g 322 (399)
T PRK07681 252 IGNE------EIVRALTQFKSNTDYGVFLPI-QKAACAALRNG-AAFCEKNRGIYQERRDTLVDGFRTFGWNVDK-PAGS 322 (399)
T ss_pred ecCH------HHHHHHHHHHhhcccCCCHHH-HHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHCCCcccC-CCee
Confidence 9876 566666543221111122222 22223334321 1234566677788889999999999987643 2456
Q ss_pred eeEEEEeCC
Q 014724 405 HLVLVDLRP 413 (419)
Q Consensus 405 hlv~vd~~~ 413 (419)
.++|+++.+
T Consensus 323 ~f~~~~l~~ 331 (399)
T PRK07681 323 MFVWAEIPK 331 (399)
T ss_pred eEEEEECCC
Confidence 789999864
No 48
>PRK07337 aminotransferase; Validated
Probab=99.89 E-value=2.8e-21 Score=195.35 Aligned_cols=284 Identities=14% Similarity=0.107 Sum_probs=185.9
Q ss_pred hhcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCCh-H
Q 014724 102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-S 178 (419)
Q Consensus 102 ~~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sG-t 178 (419)
.+.+.|..+++. +++.+.+++.+.+.+.. ..|+.. .| ..++++.+.+++.+.+|...+. .+|++++| +
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~~---~g---~~~lr~~ia~~~~~~~~~~~~~--~~i~~t~G~~ 100 (388)
T PRK07337 30 RDIIHMGIGEPDFTAPEPVVEAAARALRRGV-TQYTSA---LG---LAPLREAIAAWYARRFGLDVAP--ERIVVTAGAS 100 (388)
T ss_pred CCEEEeCCcCCCCCCCHHHHHHHHHHHhcCC-CCCCCC---CC---CHHHHHHHHHHHHHHhCCCCCh--HhEEEecCcH
Confidence 456788777643 57888999887765321 234321 12 2366666667777777764321 13555655 6
Q ss_pred HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCC-CCCCCCHHHHHHHhhhcCCeEEEE
Q 014724 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKLIIA 257 (419)
Q Consensus 179 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~-~~~~iD~d~Le~~l~~~~pklIi~ 257 (419)
+|+..++.+++++||+|++++|+|.++.. .+...|. +++.++.++ +++.+|++++++.+.+ ++++|++
T Consensus 101 ~al~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~l 169 (388)
T PRK07337 101 AALLLACLALVERGDEVLMPDPSYPCNRH--------FVAAAEG--RPVLVPSGPAERFQLTAADVEAAWGE-RTRGVLL 169 (388)
T ss_pred HHHHHHHHHhcCCCCEEEEeCCCchhhHH--------HHHHcCC--EEEEeecCCccCCcCCHHHHHhhcCc-cceEEEE
Confidence 79999999999999999999999876532 1233454 444555553 3568999999998864 7899999
Q ss_pred cCCCCCCc-----CChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC-CCc-EEEeCCCCcC--CCCCeeEEEEeC
Q 014724 258 GASAYPRD-----FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCD-VVTTTTHKSL--RGPRGGMIFFKK 328 (419)
Q Consensus 258 ~~s~~p~~-----~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~-~~D-iv~~S~hK~l--~GprgG~i~~~~ 328 (419)
++|+||+- .++++|.++|+++|+++++|+++ .++.+.+...+.+. +.+ +++.|+||.| +|.|.||+++++
T Consensus 170 ~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~~~~~ 248 (388)
T PRK07337 170 ASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIY-QGLSYDAAPVSALSLGDDVITINSFSKYFNMTGWRLGWLVVPE 248 (388)
T ss_pred ECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccc-cccccCCCCcChhhccCCEEEEEechhhcCCchhheeeeecCH
Confidence 99999852 25788999999999999999994 45554332222222 334 5688999987 688999999987
Q ss_pred CCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeEE
Q 014724 329 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVL 408 (419)
Q Consensus 329 ~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~ 408 (419)
++.+.+.........+.+.....+ +..++..-....+++..+++.++++++.+.|++.|+.+........++|
T Consensus 249 ------~l~~~l~~~~~~~~~~~s~~~q~~-~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p~~g~f~~ 321 (388)
T PRK07337 249 ------ALVGTFEKLAQNLFICASALAQHA-ALACFEPDTLAIYERRRAEFKRRRDFIVPALESLGFKVPVMPDGAFYVY 321 (388)
T ss_pred ------HHHHHHHHHHHHhccCCChHHHHH-HHHHhccCchHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCeeEEEE
Confidence 566665543322222222222222 2223321111234566777888899999999998876532234568899
Q ss_pred EEeCC
Q 014724 409 VDLRP 413 (419)
Q Consensus 409 vd~~~ 413 (419)
++++.
T Consensus 322 ~~~~~ 326 (388)
T PRK07337 322 ADCRG 326 (388)
T ss_pred Eeccc
Confidence 99874
No 49
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.89 E-value=2e-22 Score=196.35 Aligned_cols=223 Identities=18% Similarity=0.134 Sum_probs=158.2
Q ss_pred HHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccC
Q 014724 153 CQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD 232 (419)
Q Consensus 153 ~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~ 232 (419)
+++.++++||.+. +.+++++++.|+.+++.++++|||+|++..+.|.++.. .+...|+....++.+.+
T Consensus 64 ~~~~~A~~~ga~~----~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~--------~~~~~g~~~~~v~~~~~ 131 (294)
T cd00615 64 AQELAARAFGAKH----TFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVIN--------GLVLSGAVPVYLKPERN 131 (294)
T ss_pred HHHHHHHHhCCCC----EEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHH--------HHHHCCCEEEEecCccC
Confidence 4578889999875 33334455679999999999999999999988766541 23455654444433322
Q ss_pred CC---CCCCCHHHHHHHhhh-cCCeEEEEcCCCC-CCcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCC-C-CC
Q 014724 233 ES---TGLVDYDMLEKTAIL-FRPKLIIAGASAY-PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-K-YC 305 (419)
Q Consensus 233 ~~---~~~iD~d~Le~~l~~-~~pklIi~~~s~~-p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~-~-~~ 305 (419)
++ .+.+|++++++.+++ .++|+|++++|++ +...|+++|+++|+++|+++++|++|+.++.+.+..+... . ++
T Consensus 132 ~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~~~~~~ 211 (294)
T cd00615 132 PYYGIAGGIPPETFKKALIEHPDAKAAVITNPTYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAAMAGA 211 (294)
T ss_pred cccCcCCCCCHHHHHHHHHhCCCceEEEEECCCCCCEecCHHHHHHHHHhcCCeEEEECcchhhhccCcccCcchhhcCC
Confidence 21 147999999999975 3688888877754 4678999999999999999999999976654433323222 2 78
Q ss_pred cEEEeCCCCcCCCCCe-eEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHH
Q 014724 306 DVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCR 384 (419)
Q Consensus 306 Div~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~ 384 (419)
|++++|+||+++|+++ |++..+++.. ..+++.........++|+...++++..++..+. .+.+++.++..++++
T Consensus 212 div~~S~hK~l~g~~~~~~l~~~~~~~----~~~~~~~~~~~~~ttsps~~~~asl~~a~~~~~-~~g~~~~~~~~~~~~ 286 (294)
T cd00615 212 DIVVQSTHKTLPALTQGSMIHVKGDLV----NPDRVNEALNLHQSTSPSYLILASLDVARAMMA-LEGKELVEELIELAL 286 (294)
T ss_pred cEEEEchhcccchHhHHHHHHhCCCcC----CHHHHHHHHHHHCCCCcHHHHHHHHHHHHHHHH-HHhHHHHHHHHHHHH
Confidence 9999999999999875 6666655311 122333332223346788888999988887764 345678888999999
Q ss_pred HHHHHHHh
Q 014724 385 ALASRLVE 392 (419)
Q Consensus 385 ~l~~~L~~ 392 (419)
.+++.|.+
T Consensus 287 ~~r~~l~~ 294 (294)
T cd00615 287 YARQEINK 294 (294)
T ss_pred HHHHHHhC
Confidence 99988753
No 50
>PRK08068 transaminase; Reviewed
Probab=99.89 E-value=8.2e-21 Score=192.02 Aligned_cols=284 Identities=14% Similarity=0.073 Sum_probs=186.0
Q ss_pred hhcccccccCC-C-ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCCh-H
Q 014724 102 FKSLELIASEN-F-TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-S 178 (419)
Q Consensus 102 ~~~i~L~~sen-~-~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sG-t 178 (419)
.+.|+|..++. . .++.+.+++.+.+......+|+. ..|. .++++.+.+++.+.+|.+.+ ++.+|++++| +
T Consensus 32 ~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~g~---~~lr~aia~~~~~~~g~~~~-~~~~i~it~G~~ 104 (389)
T PRK08068 32 HDVINLGQGNPDQPTPEHIVEALQEAAENPANHKYSP---FRGY---PFLKEAAADFYKREYGVTLD-PETEVAILFGGK 104 (389)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC---CCCC---HHHHHHHHHHHHHHhCCCCC-CCccEEEcCCcH
Confidence 34588877652 2 45778888887665322223432 1232 36766777777766775432 1113555655 5
Q ss_pred HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCC-CCCCCHHHHHHHhhhcCCeEEEE
Q 014724 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIA 257 (419)
Q Consensus 179 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~-~~~iD~d~Le~~l~~~~pklIi~ 257 (419)
+++..++.+++++||+|++++|+|..+.. .+...|. +++.++++++ ++.+|++++++.+.+ ++|+|++
T Consensus 105 ~~l~~~~~~~~~~gd~vlv~~P~y~~~~~--------~~~~~g~--~~~~i~~~~~~~~~~d~~~l~~~~~~-~~~~v~l 173 (389)
T PRK08068 105 AGLVELPQCLMNPGDTILVPDPGYPDYLS--------GVALARA--QFETMPLIAENNFLPDYTKIPEEVAE-KAKLMYL 173 (389)
T ss_pred HHHHHHHHHhCCCCCEEEEcCCCCcchHH--------HHHhcCC--EEEEeecccccCCCCCHHHHHHhccc-cceEEEE
Confidence 78888999999999999999998876542 2245565 4445555543 467899999998864 7899999
Q ss_pred cCCCCCC--cCC---hHHHHHHHHHhCCEEEEeccccccccccCCcC-CCCC-----CCcEEEeCCCCcC--CCCCeeEE
Q 014724 258 GASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVA-DPFK-----YCDVVTTTTHKSL--RGPRGGMI 324 (419)
Q Consensus 258 ~~s~~p~--~~d---l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~-~~~~-----~~Div~~S~hK~l--~GprgG~i 324 (419)
++|+||+ ..+ +++|.++|+++|++||+|+++ ..+.+.+..+ +.+. ...+++.|++|+| +|.|.||+
T Consensus 174 ~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay-~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~ 252 (389)
T PRK08068 174 NYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAY-GAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFA 252 (389)
T ss_pred ECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhh-hhhccCCCCCcChhhCCCccCCEEEEecchhccCCccceeEeE
Confidence 9999995 333 568888999999999999995 4444433211 1111 1338899999997 78899999
Q ss_pred EEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcc
Q 014724 325 FFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDN 404 (419)
Q Consensus 325 ~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~ 404 (419)
+.++ ++.+.+.....+...+.+.....++ ..++... ....++.++++.++++.+.+.|++.|+.+.. ...+
T Consensus 253 ~~~~------~l~~~l~~~~~~~~~~~~~~~q~~~-~~~l~~~-~~~~~~~~~~~~~~r~~~~~~L~~~g~~~~~-~~g~ 323 (389)
T PRK08068 253 VGNE------SVIEAINLLQDHLFVSLFGAIQDAA-IEALLSD-QSCVAELVARYESRRNAFISACREIGWEVDA-PKGS 323 (389)
T ss_pred ecCH------HHHHHHHHHHhhccCCCChHHHHHH-HHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHCCCcccC-CCee
Confidence 9877 6776665543332222222222222 2233221 1335677888889999999999999987664 2345
Q ss_pred eeEEEEeCC
Q 014724 405 HLVLVDLRP 413 (419)
Q Consensus 405 hlv~vd~~~ 413 (419)
.++|+++.+
T Consensus 324 ~~~~v~~~~ 332 (389)
T PRK08068 324 FFAWMPVPK 332 (389)
T ss_pred EEEEEECCC
Confidence 678998854
No 51
>PRK09082 methionine aminotransferase; Validated
Probab=99.89 E-value=3.2e-21 Score=194.82 Aligned_cols=304 Identities=13% Similarity=0.147 Sum_probs=200.3
Q ss_pred hccccccChhHHHHHHHHHHHhhhcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q 014724 80 DYSLGEADPEVCEIITKEKERQFKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRA 157 (419)
Q Consensus 80 ~~~l~~~~~~~~~~~~~e~~r~~~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~l 157 (419)
.+++..+.+.++..+..... ....|+|..++.. .++.+++++.+.+.... .+|+. ..|. .++++.+++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~-~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~-~~Y~~---~~G~---~~lr~~~a~~l 80 (386)
T PRK09082 9 QSKLPNVGTTIFTVMSALAA-EHGAINLSQGFPDFDGPPYLVEALAYAMAAGH-NQYPP---MTGV---AALREAIAAKT 80 (386)
T ss_pred hhHhhccCccHHHHHHHHHh-hCCEEEecCCCCCCCCCHHHHHHHHHHHHcCC-CCCCC---CCCc---HHHHHHHHHHH
Confidence 34455556666655543322 2445888776633 46888998887764322 23432 1232 36666777888
Q ss_pred HHHcCCCCCCCceeEecCCh-HHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCC
Q 014724 158 LAAFNLDENKWGVNVQPLSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG 236 (419)
Q Consensus 158 a~~~g~~~~~~~v~V~~~sG-t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~ 236 (419)
.+.+|.+.+. ..+|.+++| ++|+..++.++++|||+|++++|.|.++.. .+...|. ++++++++++++
T Consensus 81 ~~~~~~~~~~-~~~i~~t~G~~~al~~~~~~~~~~gd~Vli~~p~y~~~~~--------~~~~~g~--~~~~~~~~~~~~ 149 (386)
T PRK09082 81 ARLYGRQYDA-DSEITVTAGATEALFAAILALVRPGDEVIVFDPSYDSYAP--------AIELAGG--RAVRVALQPPDF 149 (386)
T ss_pred HHHhCCCCCC-CCcEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhhHH--------HHHHcCC--EEEEEecCcccc
Confidence 8888876421 113556655 679999999999999999999998876531 2334455 555565654567
Q ss_pred CCCHHHHHHHhhhcCCeEEEEcCCCCCCc-----CChHHHHHHHHHhCCEEEEeccccccccccCC-cCCCC--C---CC
Q 014724 237 LVDYDMLEKTAILFRPKLIIAGASAYPRD-----FDYPRMRQIADAVGALLMMDMAHISGLVAASV-VADPF--K---YC 305 (419)
Q Consensus 237 ~iD~d~Le~~l~~~~pklIi~~~s~~p~~-----~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~-~~~~~--~---~~ 305 (419)
.+|++++++.+++ ++|+|++++|+||+- .++++|.++|++||+++|+|++| ..+.+.+. .++.. + ..
T Consensus 150 ~~d~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y-~~~~~~~~~~~s~~~~~~~~~~ 227 (386)
T PRK09082 150 RVDWQRFAAAISP-RTRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVY-EHIVFDGAGHASVLRHPELRER 227 (386)
T ss_pred cCCHHHHHHhcCc-cceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhh-hhhccCCCCCCChhhCcCccCc
Confidence 8999999999864 789999988999853 46889999999999999999995 44454332 22221 1 23
Q ss_pred cEEEeCCCCcC--CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHH
Q 014724 306 DVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNC 383 (419)
Q Consensus 306 Div~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~ 383 (419)
.++++|+||+| +|.|.||+++++ ++.+.+.........+.+..... +++..+.. .....++..+.+.+++
T Consensus 228 ~i~~~S~SK~~~~~G~RiG~iv~~~------~l~~~~~~~~~~~~~~~~~~~q~-~~~~~l~~-~~~~~~~~~~~~~~~~ 299 (386)
T PRK09082 228 AFVVSSFGKTYHVTGWKVGYCVAPA------ALSAEFRKVHQYNTFTVNTPAQL-ALADYLRA-EPEHYLELPAFYQAKR 299 (386)
T ss_pred EEEEeechhhccchhhhhhhhhCCH------HHHHHHHHHHhhhcCCCChHHHH-HHHHHHhC-ChHHHHHHHHHHHHHH
Confidence 48899999987 688999999886 56665544321111112222222 22333332 2234566777788999
Q ss_pred HHHHHHHHhCCcEEecCCCcceeEEEEeCC
Q 014724 384 RALASRLVELGYKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 384 ~~l~~~L~~~G~~v~~~~t~~hlv~vd~~~ 413 (419)
+.+.+.|++.|+++... ..+.++|++++.
T Consensus 300 ~~~~~~L~~~~~~~~~~-~g~~~~~~~~~~ 328 (386)
T PRK09082 300 DRFRAALANSRFKLLPC-EGTYFQLVDYSA 328 (386)
T ss_pred HHHHHHHHhCCCcccCC-CeeEEEEEeccc
Confidence 99999999988887653 346779989863
No 52
>PRK08912 hypothetical protein; Provisional
Probab=99.89 E-value=8.1e-21 Score=191.91 Aligned_cols=303 Identities=16% Similarity=0.134 Sum_probs=195.6
Q ss_pred ccccccChhHHHHHHHHHHHhhhcccccccCC--CChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 014724 81 YSLGEADPEVCEIITKEKERQFKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRAL 158 (419)
Q Consensus 81 ~~l~~~~~~~~~~~~~e~~r~~~~i~L~~sen--~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la 158 (419)
+.+...++.++..+..... ....|+|..+.. ..|+.+.+++.+.+.+.. .+|+. ..|. .++++.+.+++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~-~~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~-~~Y~~---~~G~---~~lr~~ia~~~~ 77 (387)
T PRK08912 6 PVFADLPTTIFEVMSQLAR-EHGAINLGQGFPDDPGPEDVRRAAADALLDGS-NQYPP---MMGL---PELRQAVAAHYA 77 (387)
T ss_pred HHHhhCCCCHHHHHHHHHh-hCCeEEccCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC---CCCc---HHHHHHHHHHHH
Confidence 3455556655554443322 245677776542 246778888776654322 23443 1232 366667777887
Q ss_pred HHcCCCCCCCceeEecCCh-HHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCC
Q 014724 159 AAFNLDENKWGVNVQPLSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGL 237 (419)
Q Consensus 159 ~~~g~~~~~~~v~V~~~sG-t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~ 237 (419)
+.+|.+.+ +..+|++++| ++|+..++.++++|||+|++++|.|..+.. .+...|. +++.++++++++.
T Consensus 78 ~~~g~~~~-~~~~i~~t~G~~~al~~~~~~~~~~gd~Vlv~~p~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~ 146 (387)
T PRK08912 78 RFQGLDLD-PETEVMVTSGATEALAAALLALVEPGDEVVLFQPLYDAYLP--------LIRRAGG--VPRLVRLEPPHWR 146 (387)
T ss_pred HHhCCCCC-CcccEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHH--------HHHHcCC--EEEEEecCcccCc
Confidence 77776532 1114555665 679999999999999999999998766531 2234555 4444555544678
Q ss_pred CCHHHHHHHhhhcCCeEEEEcCCCCCC--cC---ChHHHHHHHHHhCCEEEEeccccccccccCC-cCC--CCC---CCc
Q 014724 238 VDYDMLEKTAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASV-VAD--PFK---YCD 306 (419)
Q Consensus 238 iD~d~Le~~l~~~~pklIi~~~s~~p~--~~---dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~-~~~--~~~---~~D 306 (419)
+|++++++.+.. ++|+|++++|+||+ .. ++++|.++|++||++||+|++|. .+.+.+. ... .++ ..+
T Consensus 147 ~~~~~l~~~~~~-~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~~ 224 (387)
T PRK08912 147 LPRAALAAAFSP-RTKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWE-HVVFDGRRHIPLMTLPGMRERT 224 (387)
T ss_pred CCHHHHHHHhCc-cceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhh-hcccCCCCCcChhhCCCccCce
Confidence 999999998864 78999999999985 33 36789999999999999999963 4444331 111 111 345
Q ss_pred EEEeCCCCcC--CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHH
Q 014724 307 VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCR 384 (419)
Q Consensus 307 iv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~ 384 (419)
++++|+||.| +|.|.||+++++ ++.+.+.........+.+... ..++..++... ...+++..+++.++++
T Consensus 225 i~~~S~SK~~g~~GlRiG~~~~~~------~~~~~l~~~~~~~~~~~~~~~-q~~~~~~l~~~-~~~~~~~~~~~~~~~~ 296 (387)
T PRK08912 225 VKIGSAGKIFSLTGWKVGFVCAAP------PLLRVLAKAHQFLTFTTPPNL-QAAVAYGLGKP-DDYFEGMRADLARSRD 296 (387)
T ss_pred EEEeechhhccCcCceeEEEecCH------HHHHHHHHHHhhccccCChHH-HHHHHHHHhCC-HHHHHHHHHHHHHHHH
Confidence 8999999986 788999999987 566655443222112222222 22333344321 1234667788888999
Q ss_pred HHHHHHHhCCcEEecCCCcceeEEEEeCC
Q 014724 385 ALASRLVELGYKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 385 ~l~~~L~~~G~~v~~~~t~~hlv~vd~~~ 413 (419)
++.+.|++.|+++... ..+.++|+++.+
T Consensus 297 ~l~~~L~~~g~~~~~~-~g~~~l~~~l~~ 324 (387)
T PRK08912 297 RLAAGLRRIGFPVLPS-QGTYFLTVDLAP 324 (387)
T ss_pred HHHHHHHhCCCcccCC-CcceEEEecccc
Confidence 9999999999887653 346778998875
No 53
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.89 E-value=1.1e-20 Score=189.04 Aligned_cols=271 Identities=13% Similarity=0.088 Sum_probs=174.9
Q ss_pred ccccCCCChHHHHHHHhhhhhccCCCCCCCC-CCC---CchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHH
Q 014724 107 LIASENFTSRAVMEAVGSCLTNKYSEGLPGK-RYY---GGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF 182 (419)
Q Consensus 107 L~~sen~~~~~V~eal~~~l~~~y~~g~p~~-r~~---~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~ 182 (419)
-+.+..++.+++++++.++..+ + +.+.. ... .+.+.+.+++ +.+++++|++. + +++.+|++|+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~l~----~~la~~~g~~~----i-~~~~g~t~al~ 73 (361)
T cd06452 6 PIQRGGRLTPEARKALIEWGDG-Y--SVCDFCRGRLDEIEKPPIKDFH----HDLAEFLGMDE----A-RVTPGAREGKF 73 (361)
T ss_pred hhhcCCCCCHHHHHHHHHHhcc-c--CCccccccccccccCchHHHHH----HHHHHHcCCce----E-EEeCCHHHHHH
Confidence 3445567889999999776521 2 22211 111 1123334444 67889999833 2 44445577999
Q ss_pred HHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCC-CCCCCHHHHHHHhhh------cCCeEE
Q 014724 183 EVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAIL------FRPKLI 255 (419)
Q Consensus 183 ~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~-~~~iD~d~Le~~l~~------~~pklI 255 (419)
.++.++++|||+|+++.++|.+.+. .+...|. +++.++.+.+ ++.+|++++++.+++ .++++|
T Consensus 74 ~~l~~~~~~gd~Vl~~~~~~~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv 143 (361)
T cd06452 74 AVMHSLCEKGDWVVVDGLAHYTSYV--------AAERAGL--NVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALA 143 (361)
T ss_pred HHHHHhcCCCCEEEEcCCcchHHHH--------HHHhcCC--EEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEE
Confidence 9999999999999999877655431 2334565 4444444432 358999999998863 268899
Q ss_pred EEcCCCCC--CcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCC-C-CCcEEEeCCCCcCCC-CCeeEEEEeCCC
Q 014724 256 IAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-K-YCDVVTTTTHKSLRG-PRGGMIFFKKDP 330 (419)
Q Consensus 256 i~~~s~~p--~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~-~-~~Div~~S~hK~l~G-prgG~i~~~~~~ 330 (419)
++++++|+ ...|+++|.++|+++|+++++|++|+.|.. +.+. + ++|++++|+||+|.+ +++|++++++
T Consensus 144 ~l~~p~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~-----~~~~~~~~~d~~~~s~~K~l~~~~~~G~l~~~~-- 216 (361)
T cd06452 144 LLTHVDGNYGNLHDAKKIAKVCHEYGVPLLLNGAYTVGRM-----PVSGKELGADFIVGSGHKSMAASAPIGVLATTE-- 216 (361)
T ss_pred EEECCCCCCeeeccHHHHHHHHHHcCCeEEEECCcccCCc-----CCCHHHcCCCEEEecCCccccCCCCeEEEEECH--
Confidence 99888876 467899999999999999999999876532 1111 2 689999999999854 4779999887
Q ss_pred cchhhHHHHhhhcccC-------CCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEEecC-C
Q 014724 331 VLGVELESAINNAVFP-------GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSG-G 401 (419)
Q Consensus 331 ~~~~~l~~~i~~~~~~-------~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~~~-~ 401 (419)
++.+++.....+ ...+++....++++..++.... +.. +...+..++++++++.|+++ |++++.. .
T Consensus 217 ----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~-~~~-~~~~~~~~~~~~l~~~L~~l~g~~v~~~~~ 290 (361)
T cd06452 217 ----EWADIVFRTSQMFKIKEVELLGCTLRGAPLVTLMASFPHVK-ERV-KRWDEEVEKARWFVAELEKIEGIKQLGEKP 290 (361)
T ss_pred ----HHHHHHhccccccccceeeeeccccCchHHHHHHHHHHHHH-HHH-HHHHHHHHHHHHHHHHHhcCCCeEEECCCC
Confidence 566665432211 1112222222333333444432 222 33444456678999999998 9998732 2
Q ss_pred CcceeEEEEeC
Q 014724 402 SDNHLVLVDLR 412 (419)
Q Consensus 402 t~~hlv~vd~~ 412 (419)
..++++.++..
T Consensus 291 ~~~n~~~~~~~ 301 (361)
T cd06452 291 KNHDLMFFETP 301 (361)
T ss_pred CCCceEEEEcC
Confidence 45667777754
No 54
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.88 E-value=1.4e-20 Score=189.90 Aligned_cols=284 Identities=15% Similarity=0.110 Sum_probs=185.1
Q ss_pred hhcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCCh-H
Q 014724 102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-S 178 (419)
Q Consensus 102 ~~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sG-t 178 (419)
.+.++|..+++. +++.+++++.+.+.......|+. ..| ..++.+.+.+++.+.+|.+.+. ..+|++++| +
T Consensus 31 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G---~~~lr~aia~~~~~~~g~~~~~-~~~ii~t~G~~ 103 (385)
T PRK09276 31 VDVISLGIGDPDLPTPDHIIEAMCKAVEDPENHQYPS---YEG---MLEFRKAVADWYKRRFGVELDP-ETEVISLIGSK 103 (385)
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC---CCC---cHHHHHHHHHHHHHHhCCCCCC-CCcEEEccCcH
Confidence 345788877753 57888999887764321123432 123 2366666777777777764321 113667676 5
Q ss_pred HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCC-CCCCCHHHHHHHhhhcCCeEEEE
Q 014724 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIA 257 (419)
Q Consensus 179 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~-~~~iD~d~Le~~l~~~~pklIi~ 257 (419)
+|+..++.++++|||+|++++|.+..+.. .....|. +++.++.+.+ ++.+|++++++.+.. ++|+|++
T Consensus 104 ~~i~~~~~~~~~~gd~Vl~~~P~y~~~~~--------~~~~~g~--~~~~v~~~~~~g~~~d~~~l~~~~~~-~~~~v~l 172 (385)
T PRK09276 104 EGIAHIPLAFVNPGDVVLVPDPGYPVYKI--------GTIFAGG--EPYFMPLKEENGFLPDLDAIPEDVAK-KAKLMFI 172 (385)
T ss_pred HHHHHHHHHhCCCCCEEEEcCCCCcChHH--------HHHHcCC--EEEEEecCCCCCCcCCHHHHHHhccc-cceEEEE
Confidence 79999999999999999999998765431 1234565 4444445433 457899999988764 7899999
Q ss_pred cCCCCCC--cCC---hHHHHHHHHHhCCEEEEeccccccccccCC-cCCC--CC---CCcEEEeCCCCcC--CCCCeeEE
Q 014724 258 GASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASV-VADP--FK---YCDVVTTTTHKSL--RGPRGGMI 324 (419)
Q Consensus 258 ~~s~~p~--~~d---l~~I~~ia~~~ga~livD~ah~~Gl~~~g~-~~~~--~~---~~Div~~S~hK~l--~GprgG~i 324 (419)
++|+||+ ..+ +++|.++|++||++||+|+++ ..+.+.+. .++. ++ ...+++.|++|.| +|.|.||+
T Consensus 173 ~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~ 251 (385)
T PRK09276 173 NYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAY-SEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFA 251 (385)
T ss_pred eCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecch-hheecCCCCCCChhccCCCcCCEEEEecchhhcCCcchhheee
Confidence 9999985 333 578899999999999999995 34443321 1111 22 2247899999987 78889999
Q ss_pred EEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcc
Q 014724 325 FFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDN 404 (419)
Q Consensus 325 ~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~ 404 (419)
++++ ++.+.+......... +.......+...++... ....++..+++.++++++.+.|++.|+++..+ ..+
T Consensus 252 i~~~------~l~~~~~~~~~~~~~-~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~ 322 (385)
T PRK09276 252 VGNA------DLIAGLGKVKSNVDS-GVFQAIQEAGIAALNGP-QEVVEELRKIYQERRDILVEGLRKLGLEVEPP-KAT 322 (385)
T ss_pred eCCH------HHHHHHHHHHhhccC-CCCHHHHHHHHHHHcCc-HHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC-Ccc
Confidence 9877 566665443221111 12222222223334321 23346677788888999999999999877643 345
Q ss_pred eeEEEEeCC
Q 014724 405 HLVLVDLRP 413 (419)
Q Consensus 405 hlv~vd~~~ 413 (419)
.++|+++.+
T Consensus 323 ~~~~v~~~~ 331 (385)
T PRK09276 323 FYVWAPVPK 331 (385)
T ss_pred eEEEEECCC
Confidence 668998864
No 55
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.88 E-value=5.3e-21 Score=189.79 Aligned_cols=251 Identities=21% Similarity=0.201 Sum_probs=172.4
Q ss_pred hHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCE
Q 014724 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDR 194 (419)
Q Consensus 115 ~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~ 194 (419)
+|+|++++.+.+.+ |..++.+.+.+.|.. ...+.+++.+++++|.+. .+++++|++++.+++.++++|||+
T Consensus 17 ~~~v~~a~~~~~~~-~~~~~~~~~~~~~~~---~~~~~l~~~la~~~~~~~-----~iv~~sg~~a~~~~~~~~~~~gd~ 87 (349)
T cd06454 17 HPEVIEAAKEALDK-YGVGAGGSRLISGTS---DLHEELEEELAEFHGKEA-----ALVFSSGYAANDGVLSTLAGKGDL 87 (349)
T ss_pred CHHHHHHHHHHHHH-hCCCCCCcCeecCCc---hHHHHHHHHHHHHhCCCC-----EEEeccHHHHHHHHHHHhcCCCCE
Confidence 69999999999864 433333323333321 222344578889999764 377889999999889999999999
Q ss_pred EEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhh----cCCeEEEEcCCCCC--CcCCh
Q 014724 195 IMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL----FRPKLIIAGASAYP--RDFDY 268 (419)
Q Consensus 195 Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~----~~pklIi~~~s~~p--~~~dl 268 (419)
|++.++.|.+... .+...|.. .++++ .+|++.+++++++ .++++|++++++++ ...|+
T Consensus 88 Vl~~~~~~~~~~~--------~~~~~g~~--~~~~~------~~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~~ 151 (349)
T cd06454 88 IISDSLNHASIID--------GIRLSGAK--KRIFK------HNDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAPL 151 (349)
T ss_pred EEEehhhhHHHHH--------HHHHcCCc--eEEec------CCCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccCH
Confidence 9999887766431 12334543 33332 2688899998875 35788888776665 46799
Q ss_pred HHHHHHHHHhCCEEEEecccccccccc-CCc--CCCC--CCCcEEEeCCCCcCCCCCeeEEEEeCCCcchhhHHHHhhhc
Q 014724 269 PRMRQIADAVGALLMMDMAHISGLVAA-SVV--ADPF--KYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNA 343 (419)
Q Consensus 269 ~~I~~ia~~~ga~livD~ah~~Gl~~~-g~~--~~~~--~~~Div~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i~~~ 343 (419)
++|+++|+++|+++|+|++|..|.... +.. ..+. .+.|++++|+||+|. ++||+++.++ ++.+.+...
T Consensus 152 ~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~gG~i~~~~------~~~~~~~~~ 224 (349)
T cd06454 152 PELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFG-AVGGYIAGSK------ELIDYLRSY 224 (349)
T ss_pred HHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhc-ccCCEEECCH------HHHHHHHHh
Confidence 999999999999999999987665421 110 0111 267999999999884 4789988876 566655443
Q ss_pred ccCCCC-CCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEec
Q 014724 344 VFPGLQ-GGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS 399 (419)
Q Consensus 344 ~~~~~~-g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~ 399 (419)
..+... ++.....++++..+++.... .+...+++.++++++.+.|.+.|+++..
T Consensus 225 ~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~l~~~g~~~~~ 279 (349)
T cd06454 225 ARGFIFSTSLPPAVAAAALAALEVLQG--GPERRERLQENVRYLRRGLKELGFPVGG 279 (349)
T ss_pred chhhhccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhcCCcccC
Confidence 332222 23344445555666766543 4567788999999999999999987764
No 56
>PRK07777 aminotransferase; Validated
Probab=99.88 E-value=1.5e-20 Score=189.86 Aligned_cols=303 Identities=16% Similarity=0.162 Sum_probs=193.0
Q ss_pred ccccccChhHHHHHHHHHHHhhhcccccccCC--CChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 014724 81 YSLGEADPEVCEIITKEKERQFKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRAL 158 (419)
Q Consensus 81 ~~l~~~~~~~~~~~~~e~~r~~~~i~L~~sen--~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la 158 (419)
+++.++++.++.-+.+... ....++|..+.. ..++.+++++.+.+.... .+|+.. .| ..++++.+.+++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~-~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~-~~Y~~~---~g---~~~lr~~ia~~~~ 75 (387)
T PRK07777 4 SRLRPFGTTIFAEMSALAV-RTGAVNLGQGFPDEDGPPEMLEAAQEAIAGGV-NQYPPG---PG---IPELRAAIAAQRR 75 (387)
T ss_pred hhhhhcCccHHHHHHHHHh-hCCeEEccCCCCCCCCCHHHHHHHHHHHhcCC-CCCCCC---CC---CHHHHHHHHHHHH
Confidence 3455666665544444332 245688876542 245667777766654321 234321 22 2367767777777
Q ss_pred HHcCCCCCCCceeEecCCh-HHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCC--C
Q 014724 159 AAFNLDENKWGVNVQPLSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES--T 235 (419)
Q Consensus 159 ~~~g~~~~~~~v~V~~~sG-t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~--~ 235 (419)
+.+|.+.+. ..+|++++| ++|+.+++.+++++||+|++..|.|.++.. .+...|. +.++++.+++ +
T Consensus 76 ~~~g~~~~~-~~~i~~t~G~~~al~~~~~~~~~~gd~vli~~p~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~ 144 (387)
T PRK07777 76 RRYGLEYDP-DTEVLVTVGATEAIAAAVLGLVEPGDEVLLIEPYYDSYAA--------VIAMAGA--HRVPVPLVPDGRG 144 (387)
T ss_pred HHhCCCCCC-CCcEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHH--------HHHHCCC--EEEEeecCCccCC
Confidence 788876421 012455554 779999999999999999999988765431 2234455 3444444432 4
Q ss_pred CCCCHHHHHHHhhhcCCeEEEEcCCCCCCc-----CChHHHHHHHHHhCCEEEEeccccccccccCCcCCCC---C---C
Q 014724 236 GLVDYDMLEKTAILFRPKLIIAGASAYPRD-----FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K---Y 304 (419)
Q Consensus 236 ~~iD~d~Le~~l~~~~pklIi~~~s~~p~~-----~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~---~---~ 304 (419)
+.+|++++++.+.+ ++++|++++|+||+- .++++|.++|+++++++|+|+++ .++.+.+....++ + +
T Consensus 145 ~~~d~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y-~~~~~~~~~~~~~~~~~~~~~ 222 (387)
T PRK07777 145 FALDLDALRAAVTP-RTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVY-EHLVFDGARHLPLATLPGMRE 222 (387)
T ss_pred CcCCHHHHHHhcCc-ccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccc-hhcccCCCCcccHhhCCCCcC
Confidence 67999999998864 789999999999852 24789999999999999999995 4555433211111 1 3
Q ss_pred CcEEEeCCCCcC--CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHH
Q 014724 305 CDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN 382 (419)
Q Consensus 305 ~Div~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n 382 (419)
.++++.|+||+| +|.|.|+++.++ ++.+.+...........+... ..+++.++... ....+...+++.++
T Consensus 223 ~~i~~~S~SK~~g~~GlRiG~~~~~~------~l~~~~~~~~~~~~~~~~~~~-q~~~~~~l~~~-~~~~~~~~~~~~~~ 294 (387)
T PRK07777 223 RTVTISSAAKTFNVTGWKIGWACGPA------PLIAAVRAAKQYLTYVGGAPF-QPAVAHALDHE-DAWVAALRDSLQAK 294 (387)
T ss_pred cEEEEeechhhccCcCceeEEEecCH------HHHHHHHHHHhhcccCCCCHH-HHHHHHHHhCC-cHHHHHHHHHHHHH
Confidence 568999999987 588899999887 565555432211111111112 22223334322 23346677888899
Q ss_pred HHHHHHHHHhCCcEEecCCCcceeEEEEeCC
Q 014724 383 CRALASRLVELGYKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 383 ~~~l~~~L~~~G~~v~~~~t~~hlv~vd~~~ 413 (419)
++++.+.|++.|+++..+ ..++++|+++++
T Consensus 295 ~~~l~~~L~~~~~~~~~~-~g~~~~~~~~~~ 324 (387)
T PRK07777 295 RDRLAAGLAEAGFEVHDS-AGTYFLCADPRP 324 (387)
T ss_pred HHHHHHHHHhCCCCccCC-CcceEEEecccc
Confidence 999999999999887653 346788888754
No 57
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.88 E-value=6.7e-21 Score=192.49 Aligned_cols=264 Identities=20% Similarity=0.238 Sum_probs=179.1
Q ss_pred hcccccccC--CC-ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHH
Q 014724 103 KSLELIASE--NF-TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP 179 (419)
Q Consensus 103 ~~i~L~~se--n~-~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~ 179 (419)
+.|+|..+. .+ +++.+++++.+.+.. +..++++.++..|.. ++.+.+++++++++|.+. +|++++|++
T Consensus 43 ~~i~l~~~~~~~~~~~~~i~~a~~~~~~~-~~~~~~~~~~~~G~~---~l~~~l~~~la~~~g~~~-----~i~~tsG~~ 113 (397)
T PRK06939 43 EVINFCANNYLGLANHPELIAAAKAALDS-HGFGMASVRFICGTQ---DLHKELEEKLAKFLGTED-----AILYSSCFD 113 (397)
T ss_pred eEEEeeccCccccCCCHHHHHHHHHHHHH-cCCCCcccccccCCc---HHHHHHHHHHHHHhCCCc-----EEEEcChHH
Confidence 347776553 33 688999998887754 333455544445543 344456688999999753 478899999
Q ss_pred HHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhh---c--CCeE
Q 014724 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---F--RPKL 254 (419)
Q Consensus 180 A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~---~--~pkl 254 (419)
++..++.++++|||.|++.+|.|.++.. .+...+. +.+.++ .+|++++++.+++ . ++++
T Consensus 114 a~~~~~~~l~~~gd~vi~~~~~~~~~~~--------~~~~~~~--~~~~~~------~~d~~~l~~~i~~~~~~~~~~~~ 177 (397)
T PRK06939 114 ANGGLFETLLGKEDAIISDALNHASIID--------GVRLCKA--KRYRYA------NNDMADLEAQLKEAKEAGARHKL 177 (397)
T ss_pred HHHHHHHHhCCCCCEEEEEhhhhHHHHH--------HHHhcCC--ceEEeC------CCCHHHHHHHHHhhhccCCCCeE
Confidence 9999999999999999999998866531 1233343 333332 2588999988864 2 5778
Q ss_pred EEEcCCCC--CCcCChHHHHHHHHHhCCEEEEecccccccccc-CC--cC-CCC-CCCcEEEeCCCCcCCCCCeeEEEEe
Q 014724 255 IIAGASAY--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAA-SV--VA-DPF-KYCDVVTTTTHKSLRGPRGGMIFFK 327 (419)
Q Consensus 255 Ii~~~s~~--p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~-g~--~~-~~~-~~~Div~~S~hK~l~GprgG~i~~~ 327 (419)
|+++...+ +...++++|.++|++||++||+|++|..|.... +. .. ..+ +..|++++|+||+|.|+++||++++
T Consensus 178 v~~~~v~~~~G~~~~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~g~r~G~v~~~ 257 (397)
T PRK06939 178 IATDGVFSMDGDIAPLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALGGASGGYTAGR 257 (397)
T ss_pred EEEecCcCCCCCcCCHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhCccCceEEEeC
Confidence 88765333 345789999999999999999999986564321 11 00 011 2568999999999988899999988
Q ss_pred CCCcchhhHHHHhhhcccCCCC-CCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEec
Q 014724 328 KDPVLGVELESAINNAVFPGLQ-GGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS 399 (419)
Q Consensus 328 ~~~~~~~~l~~~i~~~~~~~~~-g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~ 399 (419)
+ ++.+.+.....+... +++.....+++..+++.+. ..++..+++.++++++.+.|++.|+++..
T Consensus 258 ~------~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 322 (397)
T PRK06939 258 K------EVIDWLRQRSRPYLFSNSLAPAIVAASIKVLELLE--ESDELRDRLWENARYFREGMTAAGFTLGP 322 (397)
T ss_pred H------HHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHcCCCcCC
Confidence 7 566666543222222 2333333444444555543 23567788889999999999998887654
No 58
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.88 E-value=4.6e-21 Score=189.53 Aligned_cols=268 Identities=19% Similarity=0.170 Sum_probs=173.0
Q ss_pred ccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHH
Q 014724 109 ASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYT 186 (419)
Q Consensus 109 ~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~ 186 (419)
.+||+ +++.+++++.+.... +. . |+......++ ++++++++| +. ..+++++|++|+..++.
T Consensus 3 ~~~~~~~~~~~v~~a~~~~~~~-~~-~------~~~~~~~~~l----~~~~a~~~g-~~----~~~~~~~gt~a~~~~~~ 65 (338)
T cd06502 3 RSDTVTGPTPEMLEAMAAANVG-DD-V------YGEDPTTAKL----EARAAELFG-KE----AALFVPSGTAANQLALA 65 (338)
T ss_pred ccccCCCCCHHHHHHHHhcccC-Cc-c------cCCCHHHHHH----HHHHHHHhC-CC----eEEEecCchHHHHHHHH
Confidence 45655 589999999775421 11 1 1112223344 467888999 33 24777889999999999
Q ss_pred HccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhh------cCCeEEEEcCC
Q 014724 187 AILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL------FRPKLIIAGAS 260 (419)
Q Consensus 187 all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~------~~pklIi~~~s 260 (419)
++++|||+|+++++.|.++..... .....|. +.+.++.+ ++.+|+++|++++++ .++++|++++|
T Consensus 66 ~l~~~gd~v~~~~~~~~~~~~~~~-----~~~~~g~--~~~~v~~~--~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p 136 (338)
T cd06502 66 AHTQPGGSVICHETAHIYTDEAGA-----PEFLSGV--KLLPVPGE--NGKLTPEDLEAAIRPRDDIHFPPPSLVSLENT 136 (338)
T ss_pred HhcCCCCeEEEecCcceeeecCCc-----HHHHcCc--eEEeecCC--CCcCCHHHHHHHhhccCCCcCCcceEEEEEee
Confidence 999999999999888765431110 1123455 44444443 367999999999864 26889999888
Q ss_pred CCCC----cCChHHHHHHHHHhCCEEEEecccccccc-ccCCcCCCC-CCCcEEEeCCCCcCCCCCeeEEEEeCCCcchh
Q 014724 261 AYPR----DFDYPRMRQIADAVGALLMMDMAHISGLV-AASVVADPF-KYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGV 334 (419)
Q Consensus 261 ~~p~----~~dl~~I~~ia~~~ga~livD~ah~~Gl~-~~g~~~~~~-~~~Div~~S~hK~l~GprgG~i~~~~~~~~~~ 334 (419)
+|+. ..++++|.++|+++|+++++|++|..+.. ..+...... .++|+++.|+||+|+.|.|++++.++
T Consensus 137 ~n~g~~~~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~g~~~~~~~------ 210 (338)
T cd06502 137 TEGGTVYPLDELKAISALAKENGLPLHLDGARLANAAAALGVALKTYKSGVDSVSFCLSKGGGAPVGAVVVGNR------ 210 (338)
T ss_pred cCCccccCHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCCCHHHHHhcCCEEEEeccccCCCccceEEECCH------
Confidence 8763 24678899999999999999999864432 112100111 26899999999999777666555565
Q ss_pred hHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeEEEEeC
Q 014724 335 ELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 335 ~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~vd~~ 412 (419)
++.+.+.....+. .++...+.+.+ +.++..+...++.++.+++.++++++.+.|++.|+.+.. +..+++++...
T Consensus 211 ~~~~~~~~~~~~~-~~~~~~~~~~~-~a~~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~--~~~~~~~v~~~ 284 (338)
T cd06502 211 DFIARARRRRKQA-GGGMRQSGFLA-AAGLAALENDLWLRRLRHDHEMARRLAEALEELGGLESE--VQTNIVLLDPV 284 (338)
T ss_pred HHHHHHHHHHHHh-CCChhhHHHHH-HHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCCCccc--ccCCeEEEecC
Confidence 5666655432111 11222222222 112222333345667788899999999999999886543 56777777664
No 59
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.88 E-value=2.3e-20 Score=189.18 Aligned_cols=284 Identities=14% Similarity=0.132 Sum_probs=184.2
Q ss_pred hhcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCCh-H
Q 014724 102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-S 178 (419)
Q Consensus 102 ~~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sG-t 178 (419)
.+.|+|..+... .|+.+++++.+.+......+|+.. .|. .++++.+.+++.+.+|.+.+ ...++++++| +
T Consensus 35 ~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~~~~Y~~~---~G~---~~lr~aia~~~~~~~~~~~~-~~~~i~vt~G~~ 107 (394)
T PRK05942 35 LDLIDLGMGNPDGAAPQPVIEAAIAALADPQNHGYPPF---EGT---ASFRQAITDWYHRRYGVELD-PDSEALPLLGSK 107 (394)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCccCCCC---CCC---HHHHHHHHHHHHHHHCCCcC-CCCeEEEccChH
Confidence 345777655422 456678877666543222244431 232 36776777788777776432 1113666666 5
Q ss_pred HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCC-CCCCCHHHHHHHhhhcCCeEEEE
Q 014724 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIA 257 (419)
Q Consensus 179 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~-~~~iD~d~Le~~l~~~~pklIi~ 257 (419)
+|+..++.++++|||+|++++|.|.++.. .+...|. ++++++++++ ++.+|++++++.+.+ ++|+|++
T Consensus 108 ~al~~~~~~~~~~gd~Vlv~~P~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~~~~-~~k~i~l 176 (394)
T PRK05942 108 EGLTHLALAYVNPGDVVLVPSPAYPAHFR--------GPLIAGA--QIYPIILKPENDWLIDLSSIPEEVAQ-QAKILYF 176 (394)
T ss_pred HHHHHHHHHhCCCCCEEEEcCCCCcchHH--------HHHHcCC--EEEEeecCCccCCccCHHHHHHhccc-cceEEEE
Confidence 79999999999999999999999877542 1234454 4555555533 467999999998864 8999999
Q ss_pred cCCCCCC--cCC---hHHHHHHHHHhCCEEEEeccccccccccCCcCCC---CC---CCcEEEeCCCCcC--CCCCeeEE
Q 014724 258 GASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP---FK---YCDVVTTTTHKSL--RGPRGGMI 324 (419)
Q Consensus 258 ~~s~~p~--~~d---l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~---~~---~~Div~~S~hK~l--~GprgG~i 324 (419)
++|+||+ ..+ +++|.++|+++|++||+|+++. .+.+.+....+ ++ ...++++|++|.| +|.|.||+
T Consensus 177 ~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~-~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i 255 (394)
T PRK05942 177 NYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYA-ELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFV 255 (394)
T ss_pred cCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccch-hhccCCCCCCChhhCCCccccEEEEecchhccCChhhheeee
Confidence 9999985 333 7889999999999999999953 44433221111 22 2347789999976 78899999
Q ss_pred EEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcc
Q 014724 325 FFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDN 404 (419)
Q Consensus 325 ~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~ 404 (419)
++++ ++.+.+.........+.+.. ...++..++... ....++..+++.++++.+.+.|++.|+++..+ ..+
T Consensus 256 ~~~~------~l~~~l~~~~~~~~~~~~~~-~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~-~~~ 326 (394)
T PRK05942 256 VGNR------HIIQGLRTLKTNLDYGIFSA-LQKAAETALQLP-DSYLQQVQERYRTRRDFLIQGLGELGWNIPPT-KAT 326 (394)
T ss_pred ecCH------HHHHHHHHHHhhcccCCCHH-HHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHCCCeecCC-Cee
Confidence 9887 56666654332111112222 223334344322 23346667778888899999999889877653 345
Q ss_pred eeEEEEeCC
Q 014724 405 HLVLVDLRP 413 (419)
Q Consensus 405 hlv~vd~~~ 413 (419)
.++|+++..
T Consensus 327 ~f~~~~~~~ 335 (394)
T PRK05942 327 MYLWVPCPV 335 (394)
T ss_pred eEEEEECCC
Confidence 568888864
No 60
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.88 E-value=7.6e-21 Score=190.62 Aligned_cols=261 Identities=14% Similarity=0.097 Sum_probs=182.2
Q ss_pred ccccccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHH
Q 014724 105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEV 184 (419)
Q Consensus 105 i~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~ 184 (419)
..++|++..+++.|++++.... ..+ +.++.+.++ .+++.+++++|.+++.. +.+++.||+.|+..+
T Consensus 7 ~~~~pgP~~~~~~~~~a~~~~~-~~~-----------~~~~~~~~~-~~~~~l~~l~~~~~~~~-~i~~~~~gt~~l~~~ 72 (368)
T PRK13479 7 LLLTPGPLTTSRTVREAMLRDW-GSW-----------DDDFNALTA-SVRAKLVAIATGEEGYT-CVPLQGSGTFSVEAA 72 (368)
T ss_pred eeecCCCCCCCHHHHHHhCCCC-CCC-----------ChHHHHHHH-HHHHHHHHHhCCCCCce-EEEEcCCcHHHHHHH
Confidence 3578999899999999987643 111 123444444 56788999999865211 334567889999999
Q ss_pred HHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhc-CCeEEEEcCCCCC
Q 014724 185 YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-RPKLIIAGASAYP 263 (419)
Q Consensus 185 ~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~-~pklIi~~~s~~p 263 (419)
+.++..+||+|++.++.+.+.. + ...+...|..+..++ .+ +++.+|++++++.+++. ++++|++.+++|+
T Consensus 73 ~~~l~~~~~~vlv~~~~~~~~~---~---~~~~~~~g~~~~~i~--~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~ 143 (368)
T PRK13479 73 IGSLVPRDGKVLVPDNGAYGAR---I---AQIAEYLGIAHVVLD--TG-EDEPPDAAEVEAALAADPRITHVALVHCETT 143 (368)
T ss_pred HHhccCCCCeEEEEeCCchHHH---H---HHHHHHcCCcEEEEE--CC-CCCCCCHHHHHHHHHhCCCCcEEEEEcccCc
Confidence 9999999999998875432221 0 011234565555544 43 34679999999988642 4567878777765
Q ss_pred --CcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcCCCCCe-eEEEEeCCCcchhhHHH
Q 014724 264 --RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELES 338 (419)
Q Consensus 264 --~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~ 338 (419)
...|+++|.++|+++|+++++|++|..|.. +.++. ++|++++|+||++.||.| |+++.++ ++.+
T Consensus 144 tG~~~~~~~i~~l~~~~~~~livDa~~~~g~~-----~~~~~~~~~d~~v~s~~K~l~g~~G~G~l~~~~------~~~~ 212 (368)
T PRK13479 144 TGILNPLDEIAAVAKRHGKRLIVDAMSSFGAI-----PIDIAELGIDALISSANKCIEGVPGFGFVIARR------SELE 212 (368)
T ss_pred cccccCHHHHHHHHHHcCCEEEEEcccccCCc-----cccccccCceEEEecCccccccCCCceEEEECH------HHHH
Confidence 467999999999999999999988765532 22232 689999999999988877 9999987 3444
Q ss_pred HhhhcccC----------------CCCCCChHHHHHHHHHHHHHhcChH-HHHHHHHHHHHHHHHHHHHHhCCcEEec
Q 014724 339 AINNAVFP----------------GLQGGPHNHTIGGLAVCLKHAQSPE-FKVYQNKVVSNCRALASRLVELGYKLVS 399 (419)
Q Consensus 339 ~i~~~~~~----------------~~~g~p~~~~iaala~al~~~~~~~-~~~~~~~v~~n~~~l~~~L~~~G~~v~~ 399 (419)
.+.....+ ....+++...++++..+++.+...+ +++..+++.++++++.+.|+++|++++.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 290 (368)
T PRK13479 213 ACKGNSRSLSLDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRALGFEPLL 290 (368)
T ss_pred HhhcCCCCeeecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCcccC
Confidence 33221111 0011455566777777887765443 5777889999999999999999998764
No 61
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.88 E-value=1.6e-20 Score=191.05 Aligned_cols=284 Identities=13% Similarity=0.094 Sum_probs=186.6
Q ss_pred hhcccccccC-C--CChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCCh-
Q 014724 102 FKSLELIASE-N--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG- 177 (419)
Q Consensus 102 ~~~i~L~~se-n--~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sG- 177 (419)
.+.++|..++ + .+++.+++++.+.+......+|+. ..|.. ++.+.+++++++.+|.+.+. ..+|++++|
T Consensus 39 ~~~i~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~---~~G~~---~LR~aia~~l~~~~g~~~~~-~~~I~it~Ga 111 (405)
T PRK06207 39 GRPVDFSHGDVDAHEPTPGAFELFSAGVERGGVQAYTE---YRGDA---DIRELLAARLAAFTGAPVDA-ADELIITPGT 111 (405)
T ss_pred CCceecCCcCCCCCCCCHHHHHHHHHHHhcCCCccCCC---CCCCH---HHHHHHHHHHHHHhCCCCCC-CCCEEEeCCc
Confidence 4557777544 4 256888888887764322234543 22333 57777788899988964321 013556666
Q ss_pred HHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccC---C-CCCCCCHHHHHHHhhhcCCe
Q 014724 178 SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD---E-STGLVDYDMLEKTAILFRPK 253 (419)
Q Consensus 178 t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~---~-~~~~iD~d~Le~~l~~~~pk 253 (419)
++|+..++.++++|||+|++.+|.|.++.. .+...|.. +++++++ + +++.+|+++|++.+++ ++|
T Consensus 112 ~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~--------~~~~~g~~--v~~v~~~~~~~~~~~~~d~~~l~~~~~~-~~k 180 (405)
T PRK06207 112 QGALFLAVAATVARGDKVAIVQPDYFANRK--------LVEFFEGE--MVPVQLDYLSADKRAGLDLDQLEEAFKA-GVR 180 (405)
T ss_pred HHHHHHHHHHhcCCCCEEEEeCCCchhHHH--------HHHHcCCE--EEEEeccccCcccCCCcCHHHHHHhhhh-cCe
Confidence 679999999999999999999998876531 22345654 4444343 1 2468999999998865 789
Q ss_pred EEEEcCCCCCC--cC---ChHHHHHHHHHhCCEEEEeccccccccccCCc-CCC--CCC-Cc--EEEeCCCCcC--CCCC
Q 014724 254 LIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVV-ADP--FKY-CD--VVTTTTHKSL--RGPR 320 (419)
Q Consensus 254 lIi~~~s~~p~--~~---dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~-~~~--~~~-~D--iv~~S~hK~l--~Gpr 320 (419)
+|++++|+||+ .. ++++|.++|++||++||+|+++ ..+++.+.. ++. +.. .| ++++|+||+| +|.|
T Consensus 181 ~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y-~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlR 259 (405)
T PRK06207 181 VFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLY-SRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYR 259 (405)
T ss_pred EEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccc-cccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccc
Confidence 99999999995 33 4778999999999999999994 555544321 111 111 12 7899999997 6999
Q ss_pred eeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEEec
Q 014724 321 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVS 399 (419)
Q Consensus 321 gG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~~ 399 (419)
.||++.++ ++.+++.........+.+. ....++..++..- ...+++..+++.++++.+.+.|++. |+++..
T Consensus 260 iG~ii~~~------~l~~~~~~~~~~~~~~~~~-~~q~a~~~~l~~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ 331 (405)
T PRK06207 260 LGVAFGSP------AIIDRMEKLQAIVSLRAAG-YSQAVLRTWFSEP-DGWMKDRIARHQAIRDDLLRVLRGVEGVFVRA 331 (405)
T ss_pred eEEEEcCH------HHHHHHHHHHhHhccCCCH-HHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHhcCCCceecC
Confidence 99999887 5666665432222122222 2223333334321 1224666777888888999999886 787664
Q ss_pred CCCcceeEEEEeCC
Q 014724 400 GGSDNHLVLVDLRP 413 (419)
Q Consensus 400 ~~t~~hlv~vd~~~ 413 (419)
. ....++|+++.+
T Consensus 332 p-~gg~fl~~~l~~ 344 (405)
T PRK06207 332 P-QAGSYLFPRLPR 344 (405)
T ss_pred C-CeeEEEEEeCcc
Confidence 2 345789999875
No 62
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.88 E-value=1.2e-21 Score=188.52 Aligned_cols=274 Identities=20% Similarity=0.252 Sum_probs=205.0
Q ss_pred hcccccccCCCC----hHHHHHHHhhhhhccCCCCCCCCCCCCchh-HHHHHHHHHHHHHHHHcCCCCCCCceeEecCCh
Q 014724 103 KSLELIASENFT----SRAVMEAVGSCLTNKYSEGLPGKRYYGGNE-YIDELETLCQKRALAAFNLDENKWGVNVQPLSG 177 (419)
Q Consensus 103 ~~i~L~~sen~~----~~~V~eal~~~l~~~y~~g~p~~r~~~g~~-~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sG 177 (419)
+.+..+.|++|+ +|.|++|+.+.+. +|+.|..|.|...|+. +..+|| +.++++.+.+.+ ++++|.
T Consensus 171 k~VtVWCSNDYLgms~Hp~V~~A~~~tl~-~hG~GAGGTRNIsG~s~~hv~LE----~eLA~LHqK~aA-----LlFsSC 240 (570)
T KOG1360|consen 171 KKVTVWCSNDYLGMSRHPEVLDAMHDTLD-RHGAGAGGTRNISGHSKHHVRLE----AELADLHQKEAA-----LLFSSC 240 (570)
T ss_pred CceEEEecCccccccCChHHHHHHHHHHH-HcCCCcCCccccCCCCchhhhHH----HHHHHHhcCcce-----eeeeee
Confidence 457788899986 7999999999985 5666778888877753 445677 567888777763 778898
Q ss_pred HHHHHHHHHHcc--CCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhc---CC
Q 014724 178 SPANFEVYTAIL--KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF---RP 252 (419)
Q Consensus 178 t~A~~~~~~all--~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~---~p 252 (419)
.-||...+..|. -||.+|+.....|.+.+ .| |+.++. .-.-++ ..|+++|+++++.. .|
T Consensus 241 fVANDstLftLak~lpgcei~SD~gNHASMI-~G-------Irns~v--~K~IFr------HND~~hL~~lL~~~~~svP 304 (570)
T KOG1360|consen 241 FVANDSTLFTLAKKLPGCEIFSDEGNHASMI-QG-------IRNSRV--PKHIFR------HNDLDHLEQLLQSSPKSVP 304 (570)
T ss_pred eeccchHHHHHHHHCCCcEEeccccchHHHH-HH-------hhhcCC--cceeec------cCCHHHHHHHHHhCCCCCC
Confidence 899999998884 49999998877665543 12 223332 111222 36899999998753 47
Q ss_pred eEEEEcC--CCCCCcCChHHHHHHHHHhCCEEEEecccccccccc---CC--cCCCCCCCcEEEeCCCCcCCCCCeeEEE
Q 014724 253 KLIIAGA--SAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAA---SV--VADPFKYCDVVTTTTHKSLRGPRGGMIF 325 (419)
Q Consensus 253 klIi~~~--s~~p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~---g~--~~~~~~~~Div~~S~hK~l~GprgG~i~ 325 (419)
|+|.+.. |..+.+.|+++|++++++||++.++|+.|+.|+.+. |. .+..+...||+++|+-|+| |--||||.
T Consensus 305 KivAFEtVhSM~GavcpleelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKaf-GcVGGYIA 383 (570)
T KOG1360|consen 305 KIVAFETVHSMDGAVCPLEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAF-GCVGGYIA 383 (570)
T ss_pred ceEEEeeeeccCCCcCCHHHHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhc-ccccceeh
Confidence 8888764 445567899999999999999999999999998764 21 1222336899999999998 67899999
Q ss_pred EeCCCcchhhHHHHhhhcccCCCC--CCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCc
Q 014724 326 FKKDPVLGVELESAINNAVFPGLQ--GGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSD 403 (419)
Q Consensus 326 ~~~~~~~~~~l~~~i~~~~~~~~~--g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~ 403 (419)
... .+.+.++++...++. +-|. ..+++...+.+.+..++....++++++|.+++.+.|.+.|+.|.+ .+
T Consensus 384 at~------~LvDmiRSyAaGFIFTTSLPP-~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~GiPVi~--~p 454 (570)
T KOG1360|consen 384 ATR------KLVDMIRSYAAGFIFTTSLPP-MVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMELGIPVIP--NP 454 (570)
T ss_pred hhh------hHHHHHHHhcCceEEecCCCh-HHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHcCCcccC--CC
Confidence 887 688888875433332 2333 334444457777777777888899999999999999999999986 68
Q ss_pred ceeEEEEeC
Q 014724 404 NHLVLVDLR 412 (419)
Q Consensus 404 ~hlv~vd~~ 412 (419)
+|+|.|.+.
T Consensus 455 SHIiPv~vg 463 (570)
T KOG1360|consen 455 SHIIPVRVG 463 (570)
T ss_pred cceeeeecc
Confidence 999999774
No 63
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.88 E-value=8e-21 Score=193.30 Aligned_cols=241 Identities=22% Similarity=0.314 Sum_probs=169.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccE
Q 014724 146 IDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFE 225 (419)
Q Consensus 146 ~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~ 225 (419)
..+|| +.++++||.+. + +.+.+|+.|+..++.++++|||.|+ +++.+..+. ..+...|. +
T Consensus 55 ~~~Le----eaia~~~g~~~----v-v~t~~Gt~Al~la~~al~~pGD~V~-~~~~f~~~~--------~~i~~~Ga--~ 114 (431)
T cd00617 55 FYDLE----DAVQDLFGFKH----I-IPTHQGRGAENILFSILLKPGRTVP-SNMHFDTTR--------GHIEANGA--V 114 (431)
T ss_pred HHHHH----HHHHHHHCCCe----E-EEcCCHHHHHHHHHHHhCCCCCEEc-cCCcccchH--------HHHHhCCC--E
Confidence 44676 45678888875 3 6778899999999999999999873 544332221 12345565 4
Q ss_pred EEecccCC---------CCCCCCHHHHHHHhhhc---CCeEEEEcCCCCCC---cC---ChHHHHHHHHHhCCEEEEecc
Q 014724 226 SMPYRLDE---------STGLVDYDMLEKTAILF---RPKLIIAGASAYPR---DF---DYPRMRQIADAVGALLMMDMA 287 (419)
Q Consensus 226 ~v~~~~~~---------~~~~iD~d~Le~~l~~~---~pklIi~~~s~~p~---~~---dl~~I~~ia~~~ga~livD~a 287 (419)
++.+++++ .++.+|+++|++.+.+. ++++|+++.|+|++ .. ++++|.++|++||++||.|+|
T Consensus 115 pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaA 194 (431)
T cd00617 115 PVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAA 194 (431)
T ss_pred eEEEecccccccccccCCCCCcCHHHHHHHhCcccCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEch
Confidence 44444442 23569999999999753 37889888888864 23 467889999999999999999
Q ss_pred cccccc-c-----cCCcCCC--------CCCCcEEEeCCCCcCCCCCeeEEEEeCCCcchhhHHHHhhhcc--cCC--CC
Q 014724 288 HISGLV-A-----ASVVADP--------FKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAV--FPG--LQ 349 (419)
Q Consensus 288 h~~Gl~-~-----~g~~~~~--------~~~~Div~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i~~~~--~~~--~~ 349 (419)
|..+-. + .+....+ +.++|.++.|++|.+.++-||+++++++ ++.+++.... +.+ ..
T Consensus 195 r~~~na~~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~~GG~i~~~d~-----~l~~~~~~~~~~~~~~~~~ 269 (431)
T cd00617 195 RFAENAYFIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVNIGGFLALRDD-----ELYEEARQRVVLYEGFVTY 269 (431)
T ss_pred hhHhhhhhhhcccccccCCCHHHHHHHhhccCCEEEEEeecCCCCccceEEEeCcH-----HHHHHHHHhccccCCcccc
Confidence 876411 1 1211112 2368999999999988888999999985 5777766432 111 23
Q ss_pred CCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeEEEEeCCcc
Q 014724 350 GGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMV 415 (419)
Q Consensus 350 g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~vd~~~~~ 415 (419)
|+.....++|++.+|.+..+ ..+.++..+++++|.+.|.+.|++++. ....|.+|+|++.++
T Consensus 270 gG~~~r~~~A~A~gL~e~~~---~~~l~~~~~~r~~l~~~L~~~G~~v~~-P~Ggh~v~~d~~~~~ 331 (431)
T cd00617 270 GGMAGRDMEALAQGLREAVE---EDYLRHRVEQVRYLGDRLDEAGVPIVE-PAGGHAVFIDAREFL 331 (431)
T ss_pred ccccHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHCCCCccC-CCcceEEEEEhHHhc
Confidence 45556667777778876432 245666666789999999999999886 356799999998653
No 64
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.88 E-value=8.3e-21 Score=191.19 Aligned_cols=265 Identities=18% Similarity=0.218 Sum_probs=183.9
Q ss_pred ccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHc
Q 014724 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI 188 (419)
Q Consensus 109 ~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~al 188 (419)
++..++++.|++++.+.+.+.+ ++|+..+..+..+.+.++ .+++++++++|++++ + .+++.+|++|++.++.++
T Consensus 6 aa~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~r~~la~~~g~~~~-~--i~~t~~~t~a~~~al~~~ 79 (379)
T TIGR03402 6 NATTRVDPEVLEAMLPYFTEYF--GNPSSMHSFGGEVGKAVE-EAREQVAKLLGAEPD-E--IIFTSGGTESDNTAIKSA 79 (379)
T ss_pred cCCCCCCHHHHHHHHHHHHhcC--CCCCcccHHHHHHHHHHH-HHHHHHHHHhCCCCC-e--EEEeCcHHHHHHHHHHHH
Confidence 4556789999999998876433 566543322334444454 578999999999864 2 244556788999888776
Q ss_pred c---CCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--
Q 014724 189 L---KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP-- 263 (419)
Q Consensus 189 l---~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p-- 263 (419)
+ .+||+|++...+|.++...+. .+...|..+.. ++.+ +++.+|++++++.+++ +++++++.+++|+
T Consensus 80 ~~~~~~~~~vv~~~~~~~s~~~~~~-----~~~~~G~~v~~--v~~~-~~g~~~~~~l~~~i~~-~~~lv~i~~~~n~tG 150 (379)
T TIGR03402 80 LAAQPEKRHIITTAVEHPAVLSLCQ-----HLEKQGYKVTY--LPVD-EEGRLDLEELRAAITD-DTALVSVMWANNETG 150 (379)
T ss_pred HHhcCCCCeEEEcccccHHHHHHHH-----HHHHcCCEEEE--EccC-CCCcCCHHHHHHhcCC-CcEEEEEEcccCCee
Confidence 4 467899988887766542221 12224554444 4444 3578999999999975 7899988877766
Q ss_pred CcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcCCCCCe-eEEEEeCCCcchhhHHHHh
Q 014724 264 RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAI 340 (419)
Q Consensus 264 ~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i 340 (419)
...|+++|.++|+++|+++++|++|+.|.. +..+. ++|++++|+|| +.||.| |+++.+++.. +...+
T Consensus 151 ~~~~~~~I~~l~~~~g~~vivD~~~~~g~~-----~~~~~~~~~D~~~~s~~K-~~gp~G~g~l~v~~~~~----~~p~~ 220 (379)
T TIGR03402 151 TIFPIEEIGEIAKERGALFHTDAVQAVGKI-----PIDLKEMNIDMLSLSGHK-LHGPKGVGALYIRKGTR----FRPLL 220 (379)
T ss_pred ecccHHHHHHHHHHcCCEEEEECccccccc-----ccCcccCCCCEEEEcHHH-cCCCCceEEEEECCCCC----CCCcc
Confidence 578999999999999999999999987643 22232 79999999999 778987 8888876411 11001
Q ss_pred hh--cccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHh-C-CcEEec
Q 014724 341 NN--AVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-L-GYKLVS 399 (419)
Q Consensus 341 ~~--~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~-~-G~~v~~ 399 (419)
.. .......|+++...+.++..+++.+. +.++...+++.++++++.+.|.+ . |+++..
T Consensus 221 ~g~~~~~~~~~gt~~~~~~~~l~~al~~~~-~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~ 282 (379)
T TIGR03402 221 RGGHQERGRRAGTENVPGIVGLGKAAELAT-EHLEEENTRVRALRDRLEAGLLARIPDARLNG 282 (379)
T ss_pred cCCccCCCcCCCCccHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeC
Confidence 00 00011246777788888888887765 45677778888899999999985 4 777764
No 65
>PRK07682 hypothetical protein; Validated
Probab=99.88 E-value=1e-20 Score=190.51 Aligned_cols=283 Identities=14% Similarity=0.105 Sum_probs=186.9
Q ss_pred hhcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCCh-H
Q 014724 102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-S 178 (419)
Q Consensus 102 ~~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sG-t 178 (419)
...|+|..+++. +++.+.+++.+.+...+ .+|+.. .| ..++++.+.+++.+.+|.+.+. ..+|++++| +
T Consensus 20 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~~---~g---~~~lr~~ia~~~~~~~g~~~~~-~~~i~~t~G~~ 91 (378)
T PRK07682 20 EGVISLGVGEPDFVTPWNVREASIRSLEQGY-TSYTAN---AG---LLELRQEIAKYLKKRFAVSYDP-NDEIIVTVGAS 91 (378)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhcCC-CCCCCC---CC---cHHHHHHHHHHHHHHhCCCCCC-CCcEEEeCChH
Confidence 456888888754 46677888877664322 234321 23 2367777778888877765321 013566665 6
Q ss_pred HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCC-CCCCCCHHHHHHHhhhcCCeEEEE
Q 014724 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKLIIA 257 (419)
Q Consensus 179 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~-~~~~iD~d~Le~~l~~~~pklIi~ 257 (419)
+|+.+++.++++|||+|++++|+|..+.. .+...|. +.++++.+. +++.+|++++++.+.+ ++++|++
T Consensus 92 ~al~~~~~~l~~~gd~vl~~~p~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~v~~ 160 (378)
T PRK07682 92 QALDVAMRAIINPGDEVLIVEPSFVSYAP--------LVTLAGG--VPVPVATTLENEFKVQPAQIEAAITA-KTKAILL 160 (378)
T ss_pred HHHHHHHHHhCCCCCEEEEeCCCchhhHH--------HHHHcCC--EEEEeecCCccCCCCCHHHHHhhcCc-ccEEEEE
Confidence 79999999999999999999998765431 2234454 444554442 3578999999998864 7899988
Q ss_pred cCCCCCCc--C---ChHHHHHHHHHhCCEEEEeccccccccccCCcCC--CCC---CCcEEEeCCCCcC--CCCCeeEEE
Q 014724 258 GASAYPRD--F---DYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK---YCDVVTTTTHKSL--RGPRGGMIF 325 (419)
Q Consensus 258 ~~s~~p~~--~---dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~--~~~---~~Div~~S~hK~l--~GprgG~i~ 325 (419)
++|+||+- . ++++|.++|++||+++|+|+++ .++.+.+...+ .+. ...++++|+||+| +|.|.||++
T Consensus 161 ~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~ 239 (378)
T PRK07682 161 CSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIY-AELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIA 239 (378)
T ss_pred ECCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhh-hhcccCCCCCChhhcccccCCEEEEecCcccccChhhhhhhhh
Confidence 88999852 2 4789999999999999999995 45554432111 111 2348899999997 688999999
Q ss_pred EeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcce
Q 014724 326 FKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNH 405 (419)
Q Consensus 326 ~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~h 405 (419)
+++ ++.+.+.........+.+... ..+...+++.. ....++.++++.++++++.+.|++.|+++..+ ..+.
T Consensus 240 ~~~------~~i~~l~~~~~~~~~~~~~~~-q~a~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~p-~g~~ 310 (378)
T PRK07682 240 APV------YFSEAMLKIHQYSMMCAPTMA-QFAALEALRAG-NDDVIRMRDSYRKRRNFFVTSFNEIGLTCHVP-GGAF 310 (378)
T ss_pred cCH------HHHHHHHHHHHhhccCCCHHH-HHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHHCCCccCCC-CeeE
Confidence 987 566665433221112222222 22333344332 12356677788899999999999999876542 3456
Q ss_pred eEEEEeCC
Q 014724 406 LVLVDLRP 413 (419)
Q Consensus 406 lv~vd~~~ 413 (419)
++|+++.+
T Consensus 311 ~~~~~~~~ 318 (378)
T PRK07682 311 YAFPSISS 318 (378)
T ss_pred EEEEeccC
Confidence 78887754
No 66
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.88 E-value=1.2e-20 Score=187.64 Aligned_cols=274 Identities=22% Similarity=0.217 Sum_probs=182.4
Q ss_pred hhcccccccCCC---ChHHHHHHHhhhhhccCCCCCCCCCCCCch-hHHHHHHHHHHHHHHHHcCCCCCCCceeEecCCh
Q 014724 102 FKSLELIASENF---TSRAVMEAVGSCLTNKYSEGLPGKRYYGGN-EYIDELETLCQKRALAAFNLDENKWGVNVQPLSG 177 (419)
Q Consensus 102 ~~~i~L~~sen~---~~~~V~eal~~~l~~~y~~g~p~~r~~~g~-~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sG 177 (419)
++.|+|..++.+ .++.|++++.+.+. +|..++++.+...|. +...+ +++.++++++.+. .+++++|
T Consensus 16 ~~~id~~~~~~~g~~~~~~v~~a~~~~~~-~~~~~~~~~~~~~g~~~~~~~----l~~~la~~~~~~~-----~i~~~~G 85 (360)
T TIGR00858 16 RRLLNFSSNDYLGLASHPEVIQAAQQGAE-QYGAGSTASRLVSGNSPLHEE----LEEELAEWKGTEA-----ALLFSSG 85 (360)
T ss_pred ceEEecccCCcccCCCCHHHHHHHHHHHH-hcCCCCCCcCcccCCcHHHHH----HHHHHHHHhCCCC-----EEEECch
Confidence 345777777431 45899999998874 444444443332332 22233 4467788888543 4788999
Q ss_pred HHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhc---CCeE
Q 014724 178 SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF---RPKL 254 (419)
Q Consensus 178 t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~---~pkl 254 (419)
++++..++.++++|||+|++.++.|..+.. .+...|.. ++.++ .+|++.+++.+++. ++++
T Consensus 86 ~~~~~~~l~~~~~~gd~v~~~~~~~~~~~~--------~~~~~g~~--~~~~~------~~d~~~l~~~~~~~~~~~~~~ 149 (360)
T TIGR00858 86 YLANVGVISALVGKGDLILSDALNHASLID--------GCRLSGAR--VRRYR------HNDVEHLERLLEKNRGERRKL 149 (360)
T ss_pred HHHHHHHHHHhCCCCCEEEEEccccHHHHH--------HHHhcCCc--eEEec------CCCHHHHHHHHHHcccCCCeE
Confidence 988888888889999999999888766532 12344543 33322 26899999988753 4678
Q ss_pred EEEcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccC-C--cC-CCCC--CCcEEEeCCCCcCCCCCeeEEEE
Q 014724 255 IIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAAS-V--VA-DPFK--YCDVVTTTTHKSLRGPRGGMIFF 326 (419)
Q Consensus 255 Ii~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g-~--~~-~~~~--~~Div~~S~hK~l~GprgG~i~~ 326 (419)
|+++.+++++ ..|+++|.++|+++|++||+|++|..|..... . .. ..++ ..+++++|+||+| |++||+++.
T Consensus 150 v~~~~~~~~~G~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~-~~~gG~~~~ 228 (360)
T TIGR00858 150 IVTDGVFSMDGDIAPLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKAL-GSYGAYVAG 228 (360)
T ss_pred EEEeCCccCCCCCcCHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhh-hccCcEEEc
Confidence 8888766653 57999999999999999999999876643211 0 00 1121 5689999999998 457899988
Q ss_pred eCCCcchhhHHHHhhhcccCC-CCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcce
Q 014724 327 KKDPVLGVELESAINNAVFPG-LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNH 405 (419)
Q Consensus 327 ~~~~~~~~~l~~~i~~~~~~~-~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~h 405 (419)
++ ++.+.+.....+. ..++++...+++...+++... ..++..+++.++++++.+.|++.|+++.. ....
T Consensus 229 ~~------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~~--~~~~ 298 (360)
T TIGR00858 229 SQ------ALIDYLINRARTLIFSTALPPAVAAAALAALELIQ--EEPWRREKLLALIARLRAGLEALGFTLMP--SCTP 298 (360)
T ss_pred CH------HHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHh--hCHHHHHHHHHHHHHHHHHHHHcCCccCC--CCCC
Confidence 76 5666654332222 222334444445455665443 22456788999999999999998887664 3456
Q ss_pred eEEEEeC
Q 014724 406 LVLVDLR 412 (419)
Q Consensus 406 lv~vd~~ 412 (419)
++|+++.
T Consensus 299 ~~~~~~~ 305 (360)
T TIGR00858 299 IVPVIIG 305 (360)
T ss_pred EEEEEeC
Confidence 7888875
No 67
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.88 E-value=4.4e-20 Score=186.78 Aligned_cols=305 Identities=13% Similarity=0.083 Sum_probs=195.7
Q ss_pred hccccccChhHHHHHHHHHHHhhhcccccccCC-C-ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q 014724 80 DYSLGEADPEVCEIITKEKERQFKSLELIASEN-F-TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRA 157 (419)
Q Consensus 80 ~~~l~~~~~~~~~~~~~e~~r~~~~i~L~~sen-~-~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~l 157 (419)
++++....+.++..+..-..+....+.|..+++ + +++.+++|+...+.+....+|+. ..|. .++.+.+++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~Y~~---~~G~---~~lr~~~~~~l 78 (389)
T PRK05957 5 TSRMDAVQSPIIPVVGQLIRENPGTISLGQGVVSYPPPPEAIEALNNFLANPENHKYQA---VQGI---PPLLEAITQKL 78 (389)
T ss_pred hHHHHhcCCcHHHHHHHHHHhCCCeEEccCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC---CCCC---HHHHHHHHHHH
Confidence 345556666666554433333345588887764 3 68889999987664322123332 1232 25556677888
Q ss_pred HHHcCCCCCCCceeEecCCh-HHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCC
Q 014724 158 LAAFNLDENKWGVNVQPLSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG 236 (419)
Q Consensus 158 a~~~g~~~~~~~v~V~~~sG-t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~ 236 (419)
++.+|.+.+.. .++++++| ++|+..++.++++|||+|++.+|.+..+.. .+...|. +++.++.+ +++
T Consensus 79 ~~~~g~~~~~~-~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~--------~~~~~g~--~~~~v~~~-~~~ 146 (389)
T PRK05957 79 QQDNGIELNNE-QAIVVTAGSNMAFMNAILAITDPGDEIILNTPYYFNHEM--------AITMAGC--QPILVPTD-DNY 146 (389)
T ss_pred HHHhCCCCCCC-CeEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcCHHH--------HHHhcCC--EEEEeecC-CCC
Confidence 88888753201 24666766 469988999999999999999998766532 1234454 45555554 457
Q ss_pred CCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCC---hHHHHHHHHHhCCEEEEeccccccccccCC-cCCCC---C-C-C
Q 014724 237 LVDYDMLEKTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASV-VADPF---K-Y-C 305 (419)
Q Consensus 237 ~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~d---l~~I~~ia~~~ga~livD~ah~~Gl~~~g~-~~~~~---~-~-~ 305 (419)
.+|+|++++.+++ ++|+|++.+|+||+ ..+ +++|.++|+++|++|++|+++ ..+.+.+. ..++. + . -
T Consensus 147 ~~d~~~l~~~i~~-~~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y-~~~~~~~~~~~~~~~~~~~~~~ 224 (389)
T PRK05957 147 QLQPEAIEQAITP-KTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAY-EYFTYDGVKHFSPGSIPGSGNH 224 (389)
T ss_pred CcCHHHHHHhcCc-CceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccc-hhccCCCCCccChhhCCCccCc
Confidence 8999999999864 78999999999985 334 888999999999999999995 45554321 11111 1 1 2
Q ss_pred cEEEeCCCCcC--CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHH
Q 014724 306 DVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNC 383 (419)
Q Consensus 306 Div~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~ 383 (419)
.|++.|++|.+ +|.|.|++++++ ++.+++.........+.+..... ++..++..- ...+++..+++.+++
T Consensus 225 ~i~~~S~SK~~g~~GlRiG~~~~~~------~~~~~~~~~~~~~~~~~~~~~q~-~~~~~l~~~-~~~~~~~~~~~~~~r 296 (389)
T PRK05957 225 TISLYSLSKAYGFASWRIGYMVIPI------HLLEAIKKIQDTILICPPVVSQY-AALGALQVG-KSYCQQHLPEIAQVR 296 (389)
T ss_pred EEEEecchhhccCccceeEEEecCH------HHHHHHHHHHhhcccCCCcHHHH-HHHHHHhCC-hHHHHHHHHHHHHHH
Confidence 37899999987 788999999877 56666654432222222222222 222234321 123467777888999
Q ss_pred HHHHHHHHhC-Cc-EEecCCCcceeEEEEeCC
Q 014724 384 RALASRLVEL-GY-KLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 384 ~~l~~~L~~~-G~-~v~~~~t~~hlv~vd~~~ 413 (419)
+.+.+.|++. |+ .+.. .....++|+++..
T Consensus 297 ~~l~~~L~~~~~~~~~~~-~~gg~~~~~~~~~ 327 (389)
T PRK05957 297 QILLKSLGQLQDRCTLHP-ANGAFYCFLKVNT 327 (389)
T ss_pred HHHHHHHHhcCCCccccC-CCeeEEEEEeCCC
Confidence 9999999886 53 4433 2235678888753
No 68
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.88 E-value=5.6e-21 Score=194.12 Aligned_cols=263 Identities=19% Similarity=0.211 Sum_probs=180.9
Q ss_pred ccCCCChHHHHHHHhhhhhccCCCCCCCCCCC-CchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHH
Q 014724 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYY-GGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTA 187 (419)
Q Consensus 109 ~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~-~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~a 187 (419)
++..++++.|++++...+.+.+ ++++.+.+ .+... .+.-+.+++.+++++|+++++ .+++.+||++++.++.+
T Consensus 10 aa~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~r~~la~~~g~~~~~---v~~~~g~t~a~~~~l~~ 83 (402)
T TIGR02006 10 AATTPVDPRVAEKMMPYLTEKF--GNPASRSHSFGWEA-EEAVENARNQVAELIGADSRE---IVFTSGATESNNLAIKG 83 (402)
T ss_pred CcCCCCCHHHHHHHHHHHHhcC--CCCChhhhHHHHHH-HHHHHHHHHHHHHHhCCCCCe---EEEeCCHHHHHHHHHHH
Confidence 3456789999999988875543 34442111 12121 233335678899999998742 24444557899888766
Q ss_pred c----cCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC
Q 014724 188 I----LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP 263 (419)
Q Consensus 188 l----l~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p 263 (419)
+ .++||+|++.+++|.++...+ ..+...|. ++..++.+ +++.+|++++++.+.+ ++++|++.+++|+
T Consensus 84 l~~~~~~~g~~Vi~~~~~h~s~~~~~-----~~~~~~g~--~v~~v~~~-~~~~~d~~~l~~~l~~-~~~lv~v~~~~n~ 154 (402)
T TIGR02006 84 IAHFYKSKGNHIITSKTEHKAVLDTC-----RYLEREGF--EVTYLPPK-SNGLIDLEELKAAIRD-DTILVSIMHVNNE 154 (402)
T ss_pred HHHhhcCCCCEEEECCCccHHHHHHH-----HHHHhcCC--EEEEEccC-CCCcCCHHHHHHhcCC-CCEEEEEECCCcC
Confidence 5 368999999988877654221 01122354 44444444 4678999999999864 7899988887776
Q ss_pred --CcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcCCCCCe-eEEEEeCCCcchhhHHH
Q 014724 264 --RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELES 338 (419)
Q Consensus 264 --~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~ 338 (419)
...|+++|.++|+++|+++++|++|+.|.. +..+. ++|++++|+||.+ ||.| |+++.+++.. .
T Consensus 155 tG~~~~~~~I~~l~~~~g~~livD~a~a~g~~-----~~~~~~~~~D~~~~s~~K~~-gp~G~G~l~~~~~~~------~ 222 (402)
T TIGR02006 155 IGVIQDIAAIGEICRERKVFFHVDAAQSVGKI-----PINVNELKVDLMSISGHKIY-GPKGIGALYVRRKPR------V 222 (402)
T ss_pred ceecccHHHHHHHHHHcCCEEEEEcchhcCCc-----ccCccccCCCEEEEehhhhc-CCCceEEEEEccCCC------C
Confidence 467999999999999999999999987643 22222 7899999999965 7876 8888876411 1
Q ss_pred Hhhhccc------CCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEEec
Q 014724 339 AINNAVF------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVS 399 (419)
Q Consensus 339 ~i~~~~~------~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~~ 399 (419)
.+..... ....|+++...++++..+++.+. ++++...+++.+.++++.+.|++. |+.+..
T Consensus 223 ~~~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~ 289 (402)
T TIGR02006 223 RLEALIHGGGHERGMRSGTLPTHQIVGMGEAFRIAK-EEMAQDTAHVLALRDRLLNGIKSIEEVYLNG 289 (402)
T ss_pred CCCceecCCCccCCccCCCccHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHhcCCCEEEeC
Confidence 1111100 11246777888888888888765 467777888999999999999875 666653
No 69
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.88 E-value=1e-20 Score=187.19 Aligned_cols=259 Identities=19% Similarity=0.212 Sum_probs=188.7
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHc-cCCC
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPH 192 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~al-l~pG 192 (419)
..+..++++.+.+.+.+-. .| ++++++| +++++++|+.+. +.++|||.|+++++.+| +.||
T Consensus 13 i~~~e~~~v~~vl~sg~i~--------~G-~~v~~FE----~~~ae~~G~k~a-----va~~sgT~AL~laL~al~ig~G 74 (374)
T COG0399 13 IGEEELAAVQEVLKSGWLT--------GG-PFVRRFE----QAFAEYLGVKYA-----VAVSSGTAALHLALLALAIGPG 74 (374)
T ss_pred cchHHHHHHHHHHHcCCee--------cC-hHHHHHH----HHHHHHhCCCeE-----EEecChHHHHHHHHHhcCCCCC
Confidence 5677788888888766532 12 5577888 578899999983 78899999999999977 7999
Q ss_pred CEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCCcCChHHHH
Q 014724 193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMR 272 (419)
Q Consensus 193 D~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~~~dl~~I~ 272 (419)
|+|+++..++-+.. +.+...|. +++.+++|++++.||++.||+.+++ ++|+|+..+ -++...|+++|.
T Consensus 75 DeVI~ps~TfvATa--------n~i~~~Ga--~PVFvDid~~T~nid~~~ie~aIt~-~tKAIipVh-l~G~~~dm~~i~ 142 (374)
T COG0399 75 DEVIVPSFTFVATA--------NAVLLVGA--KPVFVDIDPDTLNIDPDLIEAAITP-RTKAIIPVH-LAGQPCDMDAIM 142 (374)
T ss_pred CEEEecCCchHHHH--------HHHHHcCC--eEEEEecCCcccCCCHHHHHHHccc-CCeEEEEeh-hccCCCCHHHHH
Confidence 99999987654432 23445565 7788889988999999999999986 799988765 456667999999
Q ss_pred HHHHHhCCEEEEeccccccccccCCcCCCCCCCcEEEeCCC--CcCCCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCC
Q 014724 273 QIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTH--KSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQG 350 (419)
Q Consensus 273 ~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~~~Div~~S~h--K~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g 350 (419)
+||++||++||.|+||+.|..+.|..... ..|+.++||| |.++.-.||++++|++ ++.+++......|...
T Consensus 143 ~la~~~~l~vIEDaAqa~Ga~y~gk~vGt--~Gd~~~fSF~~~K~ittgEGGav~tnd~-----ela~k~~~lr~hG~~~ 215 (374)
T COG0399 143 ALAKRHGLPVIEDAAQAHGATYKGKKVGS--FGDIGAFSFHATKNLTTGEGGAVVTNDE-----ELAEKARSLRNHGLSR 215 (374)
T ss_pred HHHHHcCCeEEEEcchhccCeecCccccc--ccceEEEEecCCCCccccCceEEEeCCH-----HHHHHHHHHHHhCcCC
Confidence 99999999999999999998877643222 4677777776 9896559999999997 7777765433333211
Q ss_pred -------------CChHH-HHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEEec--CC--CcceeEEEEe
Q 014724 351 -------------GPHNH-TIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVS--GG--SDNHLVLVDL 411 (419)
Q Consensus 351 -------------~p~~~-~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~~--~~--t~~hlv~vd~ 411 (419)
+..+. ..||+ .+.++. .++++.++.+++++.+.+.|++. ++.+.. .+ ...|+..+-+
T Consensus 216 ~~~~~y~~~~~G~N~rm~~iqAAi--gl~QL~--~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~ 291 (374)
T COG0399 216 DAVFKYLHEELGYNYRLTEIQAAI--GLAQLE--RLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILV 291 (374)
T ss_pred CccccceeeecccccCHHHHHHHH--HHHHHH--HHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeEEEe
Confidence 11122 23333 344442 46778888888999999999986 444332 22 3467766666
Q ss_pred CC
Q 014724 412 RP 413 (419)
Q Consensus 412 ~~ 413 (419)
.+
T Consensus 292 ~~ 293 (374)
T COG0399 292 DE 293 (374)
T ss_pred cC
Confidence 54
No 70
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.88 E-value=3.2e-20 Score=187.90 Aligned_cols=306 Identities=17% Similarity=0.174 Sum_probs=193.1
Q ss_pred hccccccChhHHHHHHHHHHHhhhcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q 014724 80 DYSLGEADPEVCEIITKEKERQFKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRA 157 (419)
Q Consensus 80 ~~~l~~~~~~~~~~~~~e~~r~~~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~l 157 (419)
++++...+.....-+.+........|+|..+++. +++.+.+++.+.+...+. .|+. ..| ..++++.+.+++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~---~~g---~~~lr~~ia~~~ 80 (391)
T PRK07309 8 NKQLDKIEVSLIRQFDQSISDIPGILKLTLGEPDFTTPDHVKEAAKRAIDANQS-HYTG---MAG---LLELRQAAADFV 80 (391)
T ss_pred HhhhhhcCccHHHHHHHHHHhcCCeEEcCCCCCCCCCCHHHHHHHHHHHhcCCC-CCCC---CCC---cHHHHHHHHHHH
Confidence 3445455554433333222111456777766643 467788888876643221 2322 122 246777777777
Q ss_pred HHHcCCCCCCCceeEecCCh-HHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCC
Q 014724 158 LAAFNLDENKWGVNVQPLSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG 236 (419)
Q Consensus 158 a~~~g~~~~~~~v~V~~~sG-t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~ 236 (419)
...+|+..... .+|++++| ++|+.+++.+++++||+|++.+|.|+++.. .+...|. +++.++.+++++
T Consensus 81 ~~~~~~~~~~~-~~i~it~G~~~al~~~~~~~~~~gd~vl~~~p~y~~~~~--------~~~~~g~--~~~~~~~~~~~~ 149 (391)
T PRK07309 81 KEKYNLDYAPE-NEILVTIGATEALSASLTAILEPGDKVLLPAPAYPGYEP--------IVNLVGA--EIVEIDTTENDF 149 (391)
T ss_pred HHHhCCCCCCC-CcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHH--------HHHHcCC--EEEEEecCCcCC
Confidence 77777643211 13556665 679999999999999999999998877531 2234565 445555554456
Q ss_pred CCCHHHHHHHhhhc--CCeEEEEcCCCCCCc--C---ChHHHHHHHHHhCCEEEEeccccccccccCCcCCCC-C---CC
Q 014724 237 LVDYDMLEKTAILF--RPKLIIAGASAYPRD--F---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-K---YC 305 (419)
Q Consensus 237 ~iD~d~Le~~l~~~--~pklIi~~~s~~p~~--~---dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~-~---~~ 305 (419)
.+|++.+++.+++. ++|+|++++|+||+- . ++++|.++|++||+++|+|+++ ..+.+.+....++ . .-
T Consensus 150 ~~d~~~l~~~~~~~~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y-~~~~~~~~~~~~~~~~~~~~ 228 (391)
T PRK07309 150 VLTPEMLEKAILEQGDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVY-SELTYTGEPHVSIAEYLPDQ 228 (391)
T ss_pred cCCHHHHHHHhhccCCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccc-cceeeCCCCCCCHHHhccCC
Confidence 79999999988642 578999988899852 2 4889999999999999999995 4555433211121 1 12
Q ss_pred cEEEeCCCCcC--CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHH
Q 014724 306 DVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNC 383 (419)
Q Consensus 306 Div~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~ 383 (419)
-+++.|+||+| +|.|.||+++++ ++.+.+..... ....+++.....++..++.+.. .......+++.+++
T Consensus 229 ~i~~~S~SK~~g~~GlRvG~~v~~~------~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~~~-~~~~~~~~~~~~~~ 300 (391)
T PRK07309 229 TILINGLSKSHAMTGWRIGLIFAPA------EFTAQLIKSHQ-YLVTAATTMAQFAAVEALTNGK-DDALPMKKEYIKRR 300 (391)
T ss_pred EEEEecChhhccCccceeEEEEeCH------HHHHHHHHHHh-hcccCCChHHHHHHHHHHhCCh-hHHHHHHHHHHHHH
Confidence 38899999987 788999999987 56666654321 1111222222333333343311 12344566778888
Q ss_pred HHHHHHHHhCCcEEecCCCcceeEEEEeCC
Q 014724 384 RALASRLVELGYKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 384 ~~l~~~L~~~G~~v~~~~t~~hlv~vd~~~ 413 (419)
+++.+.|++.|+++... ..+..+|+++.+
T Consensus 301 ~~~~~~l~~~~~~~~~p-~gg~~~~~~l~~ 329 (391)
T PRK07309 301 DYIIEKMTDLGFKIIKP-DGAFYIFAKIPA 329 (391)
T ss_pred HHHHHHHHHCCCeecCC-CeeEEEEEECCC
Confidence 99999999989887653 335567887753
No 71
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.88 E-value=1.9e-20 Score=189.43 Aligned_cols=305 Identities=13% Similarity=0.113 Sum_probs=191.5
Q ss_pred hccccccChhHHHHHHHHHHHhhhcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q 014724 80 DYSLGEADPEVCEIITKEKERQFKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRA 157 (419)
Q Consensus 80 ~~~l~~~~~~~~~~~~~e~~r~~~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~l 157 (419)
.+++.......+..+..........|+|..+++. +++.+++++.+.+.... .+|.. ..| ..++++.+.+++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~---~~g---~~~lr~~ia~~~ 83 (391)
T PRK08361 11 AGRINLIQRSKIRELFERASKMENVISLGIGEPDFDTPKNIKEAAKRALDEGW-THYTP---NAG---IPELREAIAEYY 83 (391)
T ss_pred hHHHHhCCccHHHHHHHHHHhhcCeEEcCCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC---CCC---cHHHHHHHHHHH
Confidence 4445554444433333222223456888877753 46888888887665332 12321 123 236776777777
Q ss_pred HHHcCCCCCCCceeEecCCh-HHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCC-C
Q 014724 158 LAAFNLDENKWGVNVQPLSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-T 235 (419)
Q Consensus 158 a~~~g~~~~~~~v~V~~~sG-t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~-~ 235 (419)
.+.+|...+. .+|++++| ++|+..++.++++|||+|++++|+|.++.. .+...|. ++++++++++ +
T Consensus 84 ~~~~g~~~~~--~~i~~t~G~~~al~~~~~~l~~~g~~Vlv~~p~y~~~~~--------~~~~~g~--~~~~v~~~~~~~ 151 (391)
T PRK08361 84 KKFYGVDVDV--DNVIVTAGAYEATYLAFESLLEEGDEVIIPDPAFVCYVE--------DAKIAEA--KPIRIPLREENE 151 (391)
T ss_pred HHHhCCCCCc--ccEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHH--------HHHHcCC--EEEEEecCCccC
Confidence 7666644321 13555555 679999999999999999999998766532 2234555 4555555543 4
Q ss_pred CCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCC---hHHHHHHHHHhCCEEEEeccccccccccCC-cCCCC--C-CCc
Q 014724 236 GLVDYDMLEKTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASV-VADPF--K-YCD 306 (419)
Q Consensus 236 ~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~d---l~~I~~ia~~~ga~livD~ah~~Gl~~~g~-~~~~~--~-~~D 306 (419)
+.+|++++++.+++ ++++|++++|+||+ ..+ +++|.++|+++++++|+|+++ ..+.+.+. ..... . ..+
T Consensus 152 ~~~d~~~l~~~i~~-~~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~~ 229 (391)
T PRK08361 152 FQPDPDELLELITK-RTRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPY-EHFLYEGAKHYPMIKYAPDNT 229 (391)
T ss_pred CCCCHHHHHHhccc-ccEEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEccc-ccceeCCCCCCCHhhcCCCCE
Confidence 67999999998875 78999998899985 455 788999999999999999996 34443321 11111 1 346
Q ss_pred EEEeCCCCcC--CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcC-hHHHHHHHHHHHHH
Q 014724 307 VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQS-PEFKVYQNKVVSNC 383 (419)
Q Consensus 307 iv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~-~~~~~~~~~v~~n~ 383 (419)
++++|+||+| +|.|.|++++++ ++.+.+.........+.+... ..++..++..... ...++..+++.+++
T Consensus 230 i~~~s~SK~~~~~GlRiG~~~~~~------~~~~~~~~~~~~~~~~~~~~~-q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 302 (391)
T PRK08361 230 ILANSFSKTFAMTGWRLGFVIAPE------QVIKDMIKLHAYIIGNVASFV-QIAGIEALRSKESWKAVEEMRKEYNERR 302 (391)
T ss_pred EEEecCchhcCCcHhhhhhhccCH------HHHHHHHHHHhhhccCCChHH-HHHHHHHhcCCcccHHHHHHHHHHHHHH
Confidence 8899999987 677889999976 565555432211111122222 2222223432111 12466677788888
Q ss_pred HHHHHHHHhC-CcEEecCCCcceeEEEEeCC
Q 014724 384 RALASRLVEL-GYKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 384 ~~l~~~L~~~-G~~v~~~~t~~hlv~vd~~~ 413 (419)
+.+.+.|++. |+++... ..+.++|+++.+
T Consensus 303 ~~~~~~L~~~~~~~~~~p-~g~~~~~~~l~~ 332 (391)
T PRK08361 303 KLVLKRLKEMPHIKVFEP-KGAFYVFANIDE 332 (391)
T ss_pred HHHHHHHHhCCCCeecCC-CEEEEEEEECCC
Confidence 9999999886 7776542 335678888864
No 72
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.87 E-value=3.2e-20 Score=187.42 Aligned_cols=306 Identities=12% Similarity=0.107 Sum_probs=193.3
Q ss_pred chhhccccccChhHHHHHHHHHHHhhhcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHH
Q 014724 77 SFVDYSLGEADPEVCEIITKEKERQFKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQ 154 (419)
Q Consensus 77 ~~~~~~l~~~~~~~~~~~~~e~~r~~~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~ 154 (419)
+++++++.......+..+..........|+|..+++. .++.+++++.+.+.... ..|+. ..|. .++++.+.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~-~~Y~~---~~G~---~~lr~~ia 76 (384)
T PRK06348 4 KFLAKKYQQMEVNIMAEIATLAKKFPDIIDLSLGDPDLITDESIINAAFEDAKKGH-TRYTD---SGGD---VELIEEII 76 (384)
T ss_pred hHHHHHHhcCCccHHHHHHHHHHhcCCcEEcCCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC---CCCc---HHHHHHHH
Confidence 4456667666766655444433323456888777643 35677776555443221 23432 1232 35666677
Q ss_pred HHHHHHcCCCCCCCceeEecCCh-HHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCC
Q 014724 155 KRALAAFNLDENKWGVNVQPLSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE 233 (419)
Q Consensus 155 ~~la~~~g~~~~~~~v~V~~~sG-t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~ 233 (419)
+++.+.+|...+. .+|++++| ++|+..++.++++|||+|++++|.|.++.. .+...|. +.++++.++
T Consensus 77 ~~~~~~~~~~~~~--~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~--------~~~~~g~--~~~~~~~~~ 144 (384)
T PRK06348 77 KYYSKNYDLSFKR--NEIMATVGACHGMYLALQSILDPGDEVIIHEPYFTPYKD--------QIEMVGG--KPIILETYE 144 (384)
T ss_pred HHHHHHhCCCCCh--hhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHH--------HHHHcCC--EEEEecCCc
Confidence 7777666654321 24666666 569999999999999999999998876542 2234454 445554432
Q ss_pred -CCCCCCHHHHHHHhhhcCCeEEEEcCCCCCCc--C---ChHHHHHHHHHhCCEEEEeccccccccccCCcCC--CCC--
Q 014724 234 -STGLVDYDMLEKTAILFRPKLIIAGASAYPRD--F---DYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK-- 303 (419)
Q Consensus 234 -~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~~--~---dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~--~~~-- 303 (419)
+++.+|+++|++.++. ++|+|++++|+||+- . ++++|.++|+++|++||+|+++ .++.+.+.... .+.
T Consensus 145 ~~~~~~d~~~l~~~~~~-~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~ 222 (384)
T PRK06348 145 EDGFQINVKKLEALITS-KTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVY-DGFSFYEDFVPMATLAGM 222 (384)
T ss_pred CcCCcCCHHHHHHhhCc-CccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEeccc-ccceeCCCccchhhcCCC
Confidence 3567999999998864 789999889999963 2 4688999999999999999994 55554432111 122
Q ss_pred -CCcEEEeCCCCcC--CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHH
Q 014724 304 -YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVV 380 (419)
Q Consensus 304 -~~Div~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~ 380 (419)
...+++.|++|++ +|.|.||+++++ ++.+.+.........+.+... ..++..++... +...++..+.+.
T Consensus 223 ~~~vi~~~SfSK~~~l~GlRiG~~v~~~------~~~~~~~~~~~~~~~~~~~~~-q~~~~~~l~~~-~~~~~~~~~~~~ 294 (384)
T PRK06348 223 PERTITFGSFSKDFAMTGWRIGYVIAPD------YIIETAKIINEGICFSAPTIS-QRAAIYALKHR-DTIVPLIKEEFQ 294 (384)
T ss_pred cCcEEEEecchhccCCccccceeeecCH------HHHHHHHHHHHhccCCCCHHH-HHHHHHHHhCc-HHHHHHHHHHHH
Confidence 2247899999986 688999999987 566666543322112222222 22333344321 122355666777
Q ss_pred HHHHHHHHHHHhC-CcEEecCCCcceeEEEEeC
Q 014724 381 SNCRALASRLVEL-GYKLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 381 ~n~~~l~~~L~~~-G~~v~~~~t~~hlv~vd~~ 412 (419)
++++++.+.|++. |+++.. ...+.++|+++.
T Consensus 295 ~r~~~~~~~L~~~~~~~~~~-p~gg~~~~~~~~ 326 (384)
T PRK06348 295 KRLEYAYKRIESIPNLSLHP-PKGSIYAFINIK 326 (384)
T ss_pred HHHHHHHHHHhcCCCceecc-CCeeEEEEEecc
Confidence 7788899999886 666554 234567898886
No 73
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.87 E-value=1.8e-20 Score=189.01 Aligned_cols=248 Identities=18% Similarity=0.233 Sum_probs=174.1
Q ss_pred CCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccc
Q 014724 140 YGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSG 219 (419)
Q Consensus 140 ~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~ 219 (419)
|+|.+...+|| +.+++++|.++ .|.+.||+.|+++++...++|||.| +... ++... ...+..
T Consensus 74 Yagd~s~~~LE----~~vAe~lG~e~-----aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~---~f~Tt----~ahI~~ 135 (460)
T PRK13237 74 YAGSRNFYHLE----ETVQEYYGFKH-----VVPTHQGRGAENLLSRIAIKPGQYV--PGNM---YFTTT----RYHQEL 135 (460)
T ss_pred hcCCCcHHHHH----HHHHHHHCCCe-----EEEeCCHHHHHHHHHHhCCCCcCEE--CCcc---chHhh----HHHHHh
Confidence 34445566788 56788999987 2778899999998776678999975 3222 21110 011333
Q ss_pred cccccEEEecc---------cCCCCCCCCHHHHHHHhhhcCC------eEEEEcCCCCCCc---CChHHHHHHHHHhCCE
Q 014724 220 TSIYFESMPYR---------LDESTGLVDYDMLEKTAILFRP------KLIIAGASAYPRD---FDYPRMRQIADAVGAL 281 (419)
Q Consensus 220 ~g~~~~~v~~~---------~~~~~~~iD~d~Le~~l~~~~p------klIi~~~s~~p~~---~dl~~I~~ia~~~ga~ 281 (419)
.|. .++.+. .++.++.+|+++|++.+++..+ ++++..+..-+.. .++++|.++|++||+.
T Consensus 136 ~Ga--~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~ 213 (460)
T PRK13237 136 NGG--IFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIK 213 (460)
T ss_pred CCc--EEEeeecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCE
Confidence 444 222221 1245789999999999975322 3334433221332 4789999999999999
Q ss_pred EEEecccccc---ccc---cCCcCCC--------CCCCcEEEeCCCCcCCCCCeeEEEEeCCCcchhhHHHHhhhc--cc
Q 014724 282 LMMDMAHISG---LVA---ASVVADP--------FKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNA--VF 345 (419)
Q Consensus 282 livD~ah~~G---l~~---~g~~~~~--------~~~~Div~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i~~~--~~ 345 (419)
||.|+||+.| ++- .+....+ +.++|++++|+||.+.++-||+|+++++ ++.++++.. .+
T Consensus 214 Vi~DaAra~gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~GG~i~t~D~-----eL~~~~r~~~~~~ 288 (460)
T PRK13237 214 VFFDATRCVENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNIGGFLAMNDE-----ELFDEAKELVVVY 288 (460)
T ss_pred EEEECcchhcChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCCceEEEECCH-----HHHHHHHHhcccc
Confidence 9999999988 331 1111122 2378999999999998889999999997 888887765 45
Q ss_pred CCC--CCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeEEEEeCCccc
Q 014724 346 PGL--QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMVT 416 (419)
Q Consensus 346 ~~~--~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~vd~~~~~~ 416 (419)
+++ .|+.....+.|++++|.+..++ .|.++..++.++|.+.|.+.|+.++. .+..|.++||...++.
T Consensus 289 eG~~tygg~~grd~~alAvgl~E~~~~---~y~~~ri~~~~~l~~~L~~~Gvpv~~-p~ggH~v~vda~~~lp 357 (460)
T PRK13237 289 EGMPSYGGMAGRDMEAMAIGIEESVQY---EYIEHRVGQVRYLGEKLLAAGVPIVE-PVGGHAVFLDARRFLP 357 (460)
T ss_pred CCCcCCCChhhhHHHHHHhHHHhhchH---HHHHHHHHHHHHHHHHHHHCCCceec-CCCceEEEEEhHHhCC
Confidence 553 3343345688899999887642 78888888999999999999999986 3566999999987654
No 74
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.87 E-value=7.9e-20 Score=181.66 Aligned_cols=272 Identities=17% Similarity=0.140 Sum_probs=182.1
Q ss_pred cccccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHH
Q 014724 106 ELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVY 185 (419)
Q Consensus 106 ~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~ 185 (419)
.|+|++..+++.|++++.... +++. ..+.+.++ .+++.+++++|+++..- ..+++.+|+.++..++
T Consensus 2 ~~~p~p~~~~~~~~~~~~~~~-~~~~-----------~~~~~~~~-~~~~~la~~~~~~~~~~-~i~~~~~gt~~l~~~~ 67 (355)
T TIGR03301 2 LLTPGPLSTSATVRDAMLVDW-CHWD-----------SEFNDVTD-QVRDRLLALAGGDDNHT-CVLLQGSGTFAVEATI 67 (355)
T ss_pred cCcCCCCCCCHHHHHHhhhhc-cCCC-----------HHHHHHHH-HHHHHHHHHhcCCCCCc-EEEEeCCcHHHHHHHH
Confidence 477888889999999998732 2221 12223333 46788999999986421 1235678899999999
Q ss_pred HHccCCCCEEEEeCCCCCcc-ccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhc-CCeEEEEcCCCCC
Q 014724 186 TAILKPHDRIMGLDLPHGGH-LSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-RPKLIIAGASAYP 263 (419)
Q Consensus 186 ~all~pGD~Vl~~~~~~~g~-~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~-~pklIi~~~s~~p 263 (419)
.+++++||++++.++.+.+. +. ..+...|..+..++ .+ +++.+|++++++.++++ ++++|++.+++++
T Consensus 68 ~~~~~~~~~vi~~~~~~~~~~~~-------~~a~~~g~~~~~i~--~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~ 137 (355)
T TIGR03301 68 GSLVPRDGKLLVLINGAYGERLA-------KICEYLGIPHTDLN--FS-EYEPPDLNRIEEALAADPDITHVATVHHETT 137 (355)
T ss_pred HhccCCCCeEEEECCCchhhHHH-------HHHHHcCCceEEEe--cC-CCCCCCHHHHHHHHHhCCCceEEEEEecCCc
Confidence 99999999887766543221 11 01223455444444 43 35689999999998752 3456666555544
Q ss_pred --CcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcCCCCCe-eEEEEeCCCcchhhHHH
Q 014724 264 --RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELES 338 (419)
Q Consensus 264 --~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~ 338 (419)
...|+++|.++|++||+++++|++|..|.. +.++. ++|++++|+||++.|+.| |++++++ ++.+
T Consensus 138 ~G~~~~~~~i~~l~~~~~~~livD~~~s~g~~-----~~~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~------~~~~ 206 (355)
T TIGR03301 138 TGILNPLEAIAKVARSHGAVLIVDAMSSFGAI-----PIDIEELDVDALIASANKCLEGVPGFGFVIARR------DLLE 206 (355)
T ss_pred ccchhHHHHHHHHHHHcCCEEEEEeccccCCc-----ccchhhcCccEEEecCCcccccCCceeEEEECH------HHHH
Confidence 567899999999999999999998766532 22233 689999999999877766 9999887 3444
Q ss_pred Hhhhccc----------------CCCCCCChHHHHHHHHHHHHHhcChH-HHHHHHHHHHHHHHHHHHHHhCCcEEecC-
Q 014724 339 AINNAVF----------------PGLQGGPHNHTIGGLAVCLKHAQSPE-FKVYQNKVVSNCRALASRLVELGYKLVSG- 400 (419)
Q Consensus 339 ~i~~~~~----------------~~~~g~p~~~~iaala~al~~~~~~~-~~~~~~~v~~n~~~l~~~L~~~G~~v~~~- 400 (419)
.+..... .....+++...+.++..+++.+.+++ +++..+++.++++++.+.|++.|++++..
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~g~~~~~~~ 286 (355)
T TIGR03301 207 ASAGNARSLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRALGFQPLLPE 286 (355)
T ss_pred HhhCCCCCceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcCCeeecCC
Confidence 3331000 01122455556667777787765444 67788889999999999999999986542
Q ss_pred CCcce-eEEEEeC
Q 014724 401 GSDNH-LVLVDLR 412 (419)
Q Consensus 401 ~t~~h-lv~vd~~ 412 (419)
...+. ++++.+.
T Consensus 287 ~~~~~~~~~~~~~ 299 (355)
T TIGR03301 287 RWQSPIIVSFLYP 299 (355)
T ss_pred CCCCCcEEEEECC
Confidence 22333 4566654
No 75
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.87 E-value=4.9e-20 Score=188.76 Aligned_cols=288 Identities=14% Similarity=0.082 Sum_probs=183.5
Q ss_pred hcccccccCC-----C-ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCC
Q 014724 103 KSLELIASEN-----F-TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLS 176 (419)
Q Consensus 103 ~~i~L~~sen-----~-~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~s 176 (419)
+.|+|.-++. + +++.+++++.+.+......+|+.. .|. .++++.+.+++.+.+|.+.+. .+|++++
T Consensus 53 ~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~Y~~~---~G~---~~lr~aia~~~~~~~~~~~~~--~~v~it~ 124 (430)
T PLN00145 53 PVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNSYSTC---VGL---LPARRAIAEYLSRDLPYELST--DDIYLTA 124 (430)
T ss_pred CeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCCCCCC---ccC---HHHHHHHHHHHhhccCCCCCh--hhEEEeC
Confidence 5677876643 3 578999999888764322244431 232 366666666666555554321 1355666
Q ss_pred h-HHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCC-CCCCCCHHHHHHHhhhcCCeE
Q 014724 177 G-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKL 254 (419)
Q Consensus 177 G-t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~-~~~~iD~d~Le~~l~~~~pkl 254 (419)
| ++|+.+++.++++|||+|++++|.|..+.. .....|.. +..+++.+ +++.+|++++++++++ ++++
T Consensus 125 G~~~al~l~~~~l~~~Gd~Vlv~~P~y~~y~~--------~~~~~g~~--~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~ 193 (430)
T PLN00145 125 GCAQAIEIIMSVLAQPGANILLPRPGYPLYEA--------RAVFSGLE--VRHFDLLPERGWEVDLEGVEALADE-NTVA 193 (430)
T ss_pred CHHHHHHHHHHHhcCCCCEEEEcCCCCccHHH--------HHHHcCCE--EEEeeCCcccCCcCCHHHHHHHhCc-CceE
Confidence 5 679999999999999999999998766431 12344553 44444432 3578999999998865 7899
Q ss_pred EEEcCCCCCC--cCC---hHHHHHHHHHhCCEEEEeccccccccccCCcCCCC---CC--CcEEEeCCCCcC--CCCCee
Q 014724 255 IIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KY--CDVVTTTTHKSL--RGPRGG 322 (419)
Q Consensus 255 Ii~~~s~~p~--~~d---l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~---~~--~Div~~S~hK~l--~GprgG 322 (419)
|++++|+||+ ..+ +++|.++|+++|++||+|+++ ..+++.+....++ +. .-++++|++|++ +|+|.|
T Consensus 194 i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y-~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG~RlG 272 (430)
T PLN00145 194 MVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVY-DHLTFGSKPFVPMGVFGEVAPVLTLGSISKRWVVPGWRLG 272 (430)
T ss_pred EEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccc-hhhccCCCCccchhhhcccCcEEEEeccccccCCCCeeEE
Confidence 9999999985 333 788899999999999999994 5665543211122 22 227899999984 899999
Q ss_pred EEEEeCCC-c-chhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEEec
Q 014724 323 MIFFKKDP-V-LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVS 399 (419)
Q Consensus 323 ~i~~~~~~-~-~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~~ 399 (419)
|++..... . ...++.+.+..... ....++.....++..++..-..+.+++.+++++++++.+.+.|++. |+.+..
T Consensus 273 ~iv~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~ 350 (430)
T PLN00145 273 WIATCDPNGILKETKVVDSIRNYLN--ISTDPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKEIKCITCPH 350 (430)
T ss_pred EEEEecchhhhhhhHHHHHHHHHhc--ccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCc
Confidence 99985321 0 00011223332221 1112222233344444543112345777888899999999999886 776542
Q ss_pred CCCcceeEEEEeC
Q 014724 400 GGSDNHLVLVDLR 412 (419)
Q Consensus 400 ~~t~~hlv~vd~~ 412 (419)
......++|+++.
T Consensus 351 ~P~ga~y~~v~l~ 363 (430)
T PLN00145 351 KPEGSMFVMVKLD 363 (430)
T ss_pred CCCeeeEEEeccC
Confidence 2345678998874
No 76
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.87 E-value=2.9e-20 Score=187.49 Aligned_cols=244 Identities=17% Similarity=0.189 Sum_probs=166.8
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHc-cCCC
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPH 192 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~al-l~pG 192 (419)
.++..++++.+.+...+. + .| +.+.++| +.+++++|.+. .+.++||+.|+.+++.++ ++||
T Consensus 12 ~~~~e~~~~~~~l~~~~~--~------~g-~~~~~le----~~la~~~g~~~-----~v~~~sgt~al~lal~al~~~~G 73 (379)
T PRK11658 12 MGDEELAAVKEVLRSGWI--T------TG-PKNQALE----QAFCQLTGNQH-----AIAVSSATAGMHITLMALGIGPG 73 (379)
T ss_pred CCHHHHHHHHHHHHcCCc--c------CC-HhHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHHcCCCCC
Confidence 445567777776654331 1 12 3356776 56788999875 267789999999999999 8999
Q ss_pred CEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCCcCChHHHH
Q 014724 193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMR 272 (419)
Q Consensus 193 D~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~~~dl~~I~ 272 (419)
|+|++++++|.++.. .+...|. +++.++++++++.+|++++++.+.+ ++|+|+..++ ++...|+++|.
T Consensus 74 d~Viv~~~~~~~~~~--------~~~~~G~--~~v~vd~~~~~~~~d~~~l~~~i~~-~tkav~~~~~-~G~~~d~~~i~ 141 (379)
T PRK11658 74 DEVITPSLTWVSTLN--------MIVLLGA--TPVMVDVDRDTLMVTPEAIEAAITP-RTKAIIPVHY-AGAPADLDAIR 141 (379)
T ss_pred CEEEECCCcHHHHHH--------HHHHcCC--EEEEEecCCCcCCcCHHHHHHhccc-CCeEEEEeCC-CCCcCCHHHHH
Confidence 999999988766531 2334555 5556666656678999999999875 7898886654 56678999999
Q ss_pred HHHHHhCCEEEEeccccccccccCCcCCCCCCCcEEEeCCCCcCCCCCeeEEEEeCCCcchhhHHHHhhhcccCCC----
Q 014724 273 QIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGL---- 348 (419)
Q Consensus 273 ~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~~~Div~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~---- 348 (419)
++|+++|++||+|++|..|....+.....+ +.++++++.+|.+.+++||+++++++ ++.+++......+.
T Consensus 142 ~~a~~~gi~vi~D~a~a~g~~~~~~~~g~~-g~~~~Sf~~~K~l~~g~GG~v~~~~~-----~~~~~~~~~~~~G~~~~~ 215 (379)
T PRK11658 142 AIGERYGIPVIEDAAHAVGTYYKGRHIGAR-GTAIFSFHAIKNITCAEGGLVVTDDD-----ELADRLRSLKFHGLGVDA 215 (379)
T ss_pred HHHHHcCCeEEEECCCccCCeECCeecCCC-CCEEEeCCCCCcCcccCceEEEECCH-----HHHHHHHHHHHcCCCcch
Confidence 999999999999999988876544221111 45677777889999999999998764 55554432111110
Q ss_pred ----------------CC-CChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcE
Q 014724 349 ----------------QG-GPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYK 396 (419)
Q Consensus 349 ----------------~g-~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~ 396 (419)
.| +..+. .+.+|+...+.+.+++..++.+++++++.+.|.+.++.
T Consensus 216 ~~~~~~~~~~~~~~~~~G~n~~~~---~l~AAl~~~ql~~l~~~~~~r~~~a~~~~~~L~~~~~~ 277 (379)
T PRK11658 216 FDRQTQGRAPQAEVLTPGYKYNLA---DINAAIALVQLAKLEALNARRREIAARYLQALADLPFQ 277 (379)
T ss_pred hhhhcccCCCcceeeccccccCcC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 01 11111 22222222222456778888888999999999887643
No 77
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.87 E-value=4.6e-20 Score=186.05 Aligned_cols=277 Identities=16% Similarity=0.204 Sum_probs=186.0
Q ss_pred ccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCC-CCCCCceeEecCCh-HHHHHHHHH
Q 014724 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL-DENKWGVNVQPLSG-SPANFEVYT 186 (419)
Q Consensus 109 ~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~-~~~~~~v~V~~~sG-t~A~~~~~~ 186 (419)
++.+++++.|++++...+.+.| ++|++.+..+......+++. ++.+++.+|. +++ +|++++| ++++..++.
T Consensus 6 aa~~~~~~~v~~~~~~~~~~~~--~n~~~~~~~~~~~~~~l~~a-~~~~~~~~~~~~~~----~i~~t~g~teal~~~~~ 78 (382)
T TIGR03403 6 NATTMLDPKVKELMDPFFCDIY--GNPNSLHQFGTATHPAIAEA-LDKLYKGINARDLD----DIIITSCATESNNWVLK 78 (382)
T ss_pred cCCCCCCHHHHHHHHHHHHhcC--cCCccccHHHHHHHHHHHHH-HHHHHHHcCcCCCC----eEEEeCCHHHHHHHHHH
Confidence 3456788999999998887655 45544443344445567654 4556667776 343 3555554 679998888
Q ss_pred Hcc-----CC-CCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCC
Q 014724 187 AIL-----KP-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS 260 (419)
Q Consensus 187 all-----~p-GD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s 260 (419)
++. ++ +|+|++...+|.++..... .+...|. +++.++++ +++.+|++++++.+.+ ++++|++.++
T Consensus 79 ~~~~~~~~~~~~~~vi~~~~e~ps~~~~~~-----~~~~~G~--~v~~v~~~-~~g~~d~~~l~~~i~~-~t~lv~~~~~ 149 (382)
T TIGR03403 79 GVYFDEILKGGKNHIITTEVEHPAVRATCA-----FLESLGV--EVTYLPIN-EQGTITAEQVREAITE-KTALVSVMWA 149 (382)
T ss_pred HHHHhhcccCCCCEEEEcCCccHHHHHHHH-----HHHHCCC--EEEEEecC-CCCCCCHHHHHHhccc-CCeEEEEEcc
Confidence 762 56 4789999888876643211 1223455 44444455 3578999999999864 7899999888
Q ss_pred CCC--CcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCC-C-CCcEEEeCCCCcCCCCCe-eEEEEeCCCcchhh
Q 014724 261 AYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-K-YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVE 335 (419)
Q Consensus 261 ~~p--~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~-~-~~Div~~S~hK~l~Gprg-G~i~~~~~~~~~~~ 335 (419)
+|| ...|+++|.++|+++|+++++|++|..|.. +..+ + ++|++++|+||+ .||+| |+++.+++. .
T Consensus 150 ~n~tG~~~~~~~I~~la~~~g~~~ivD~a~~~g~~-----~~~~~~~~~D~~~~s~~K~-~gp~G~g~l~vr~~~----~ 219 (382)
T TIGR03403 150 NNETGMIFPIKEIGEICKERGVLFHTDAVQAIGKI-----PVDVQKAGVDFLSFSAHKF-HGPKGVGGLYIRKGV----E 219 (382)
T ss_pred cCCCccccCHHHHHHHHHHcCCEEEEechhhcCCC-----ccCccccCCCEEEEcchhh-CCCCceEEEEECCCC----C
Confidence 877 467999999999999999999999876643 2122 2 789999999996 57887 888887641 1
Q ss_pred HHHHhh--hcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEEecCC--CcceeEEEE
Q 014724 336 LESAIN--NAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGG--SDNHLVLVD 410 (419)
Q Consensus 336 l~~~i~--~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~~~~--t~~hlv~vd 410 (419)
+...+. ........|+++...+.+++.+++... +..+...+++.+.++++.+.|+++ |++++.+. ...+++.+.
T Consensus 220 ~~p~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~ 298 (382)
T TIGR03403 220 LTPLFHGGEHMGGRRSGTLNVPYIVAMGEAMRLAN-EYLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPNTILIS 298 (382)
T ss_pred CCCcccCCCCCCCcccCCcChHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCCEEEEE
Confidence 111110 000111235677777777888887654 345667788899999999999885 78877532 113456666
Q ss_pred eC
Q 014724 411 LR 412 (419)
Q Consensus 411 ~~ 412 (419)
+.
T Consensus 299 ~~ 300 (382)
T TIGR03403 299 IK 300 (382)
T ss_pred eC
Confidence 54
No 78
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.87 E-value=7.1e-20 Score=183.45 Aligned_cols=296 Identities=19% Similarity=0.181 Sum_probs=190.0
Q ss_pred ChhHHHHHHHHHHHh--hhcccccccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCC
Q 014724 87 DPEVCEIITKEKERQ--FKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD 164 (419)
Q Consensus 87 ~~~~~~~~~~e~~r~--~~~i~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~ 164 (419)
+.++++.++.-.++. ...| |....++.+|.+++++.+.+...+ +.+. .+.+. .++++.+++++++++|++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~~~~~--~~~~--~~~~~---~~~~~~~~~~la~~~g~~ 75 (371)
T PRK13520 4 EEEILEELEEYRSEDLKYERI-LSSMCTEPHPIARKAHEMFLETNL--GDPG--LFPGT---AKLEEEAVEMLGELLHLP 75 (371)
T ss_pred HHHHHHHHHHHHhcCCCHHHe-eeeeecCchHHHHHHHHHHHhcCC--CCcc--cCccH---HHHHHHHHHHHHHHhCCC
Confidence 445666665443322 1223 544456778999999988775432 3332 12332 244556789999999987
Q ss_pred CCCCceeEecCChHHHHHHHHHHccC----CCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCH
Q 014724 165 ENKWGVNVQPLSGSPANFEVYTAILK----PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDY 240 (419)
Q Consensus 165 ~~~~~v~V~~~sGt~A~~~~~~all~----pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~ 240 (419)
.. . .+++++|++|+..++.++.+ +||+|++.++.|.++. +.+...|..+..++ .+ +++.+|+
T Consensus 76 ~~-~--~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~~~~~h~s~~--------~~~~~~g~~~~~v~--~~-~~~~~d~ 141 (371)
T PRK13520 76 DA-Y--GYITSGGTEANIQAVRAARNLAKAEKPNIVVPESAHFSFD--------KAADMLGVELRRAP--LD-DDYRVDV 141 (371)
T ss_pred CC-C--eEEecCcHHHHHHHHHHHHhhccCCCceEEecCcchHHHH--------HHHHHcCceEEEec--CC-CCCcCCH
Confidence 63 1 25566778999888776643 5899999987665432 12234565444444 43 4678999
Q ss_pred HHHHHHhhhcCCeEEEEcCCC--CCCcCChHHHHHHHHHhCCEEEEeccccccccccCCcC--CCC--CCCcEEEeCCCC
Q 014724 241 DMLEKTAILFRPKLIIAGASA--YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPF--KYCDVVTTTTHK 314 (419)
Q Consensus 241 d~Le~~l~~~~pklIi~~~s~--~p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~--~~~--~~~Div~~S~hK 314 (419)
++|++.+.+ ++++|++..++ ++...|+++|.++|+++|+++++|++|..+........ ..+ .++|.+++|+||
T Consensus 142 ~~l~~~i~~-~~~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K 220 (371)
T PRK13520 142 KAVEDLIDD-NTIGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSITIDPHK 220 (371)
T ss_pred HHHHHHHhh-CCEEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCCCCceEEECCcc
Confidence 999999975 56666544433 45678999999999999999999999865432111101 112 268999999999
Q ss_pred cCCC-CCeeEEEEeCCCcchhhHHHHhhhcccCCC--------CCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHH
Q 014724 315 SLRG-PRGGMIFFKKDPVLGVELESAINNAVFPGL--------QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRA 385 (419)
Q Consensus 315 ~l~G-prgG~i~~~~~~~~~~~l~~~i~~~~~~~~--------~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~ 385 (419)
++.+ .++|+++..++ ++.+.+... .++. .|++....++++..+++.+...+++++.++..+++++
T Consensus 221 ~~~a~~~~G~~~~~~~-----~~~~~l~~~-~~~~~~~~~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~ 294 (371)
T PRK13520 221 MGLAPIPAGGILFRDE-----SYLDALAVD-TPYLTSKKQATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRW 294 (371)
T ss_pred ccCccCCceEEEEcCH-----HHHHhhccc-CccccCCCCcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHH
Confidence 8643 35566666553 455544311 1111 1233333455666677766555678889999999999
Q ss_pred HHHHHHhCCcEEecCCCcceeEEEEeC
Q 014724 386 LASRLVELGYKLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 386 l~~~L~~~G~~v~~~~t~~hlv~vd~~ 412 (419)
|.+.|++.|++++.. ...+++.+++.
T Consensus 295 l~~~L~~~g~~~~~~-~~~~~v~~~~~ 320 (371)
T PRK13520 295 LAEELKERGFEPVIE-PVLNIVAFDDP 320 (371)
T ss_pred HHHHHHhCCCEEecC-CCceEEEEecC
Confidence 999999999984332 34567777654
No 79
>PLN02656 tyrosine transaminase
Probab=99.87 E-value=3.8e-20 Score=188.48 Aligned_cols=289 Identities=16% Similarity=0.066 Sum_probs=184.7
Q ss_pred hhcccccccCC-----C-ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecC
Q 014724 102 FKSLELIASEN-----F-TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPL 175 (419)
Q Consensus 102 ~~~i~L~~sen-----~-~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~ 175 (419)
.+.|+|..++. + +|+.+++++.+.+......+|.. ..|. .++++.+.+++.+.+|...+. .+|+++
T Consensus 31 ~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~---~~lr~~ia~~~~~~~g~~~~~--~~i~~t 102 (409)
T PLN02656 31 KRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAP---TVGL---PQARRAIAEYLSRDLPYKLSL--DDVFIT 102 (409)
T ss_pred CeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCC---CCCC---HHHHHHHHHHHHHhcCCCCCc--ccEEEe
Confidence 56788887764 3 58999999988776433234432 1232 356656666666666654321 145566
Q ss_pred Ch-HHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCC-CCCCCCHHHHHHHhhhcCCe
Q 014724 176 SG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPK 253 (419)
Q Consensus 176 sG-t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~-~~~~iD~d~Le~~l~~~~pk 253 (419)
+| ++|+..++.++++|||+|++++|.|..+.. .....|.. ++.+++++ +++.+|++++++.+++ +++
T Consensus 103 ~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~g~~--~~~i~~~~~~~~~~d~~~l~~~~~~-~~~ 171 (409)
T PLN02656 103 SGCTQAIDVALSMLARPGANILLPRPGFPIYEL--------CAAFRHLE--VRYVDLLPEKGWEVDLDAVEALADQ-NTV 171 (409)
T ss_pred CChHHHHHHHHHHHhCCCCeEEEeCCCCCcHHH--------HHHHcCCE--EEEEeCCCcCCCCCCHHHHHHHhcc-Cce
Confidence 65 679999999999999999999998765421 12344554 44444443 3468999999998864 688
Q ss_pred EEEEcCCCCCCc-----CChHHHHHHHHHhCCEEEEeccccccccccCCcCCCC---CC--CcEEEeCCCCcC--CCCCe
Q 014724 254 LIIAGASAYPRD-----FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KY--CDVVTTTTHKSL--RGPRG 321 (419)
Q Consensus 254 lIi~~~s~~p~~-----~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~---~~--~Div~~S~hK~l--~Gprg 321 (419)
+|++++|+||+- .++++|.++|+++|++||+|+++ .++.+.+....++ +. .-|+++|++|+| +|+|.
T Consensus 172 ~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRi 250 (409)
T PLN02656 172 ALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVY-GHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGWRL 250 (409)
T ss_pred EEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhh-hhcccCCCCcccHHHhcccCcEEEEcccchhccCcceeE
Confidence 888888999862 36889999999999999999994 5666544211122 21 227799999985 88999
Q ss_pred eEEEEeCCCcc--hhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCC-cEEe
Q 014724 322 GMIFFKKDPVL--GVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG-YKLV 398 (419)
Q Consensus 322 G~i~~~~~~~~--~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G-~~v~ 398 (419)
||++++++... ..++.+++....... ++++.....++..++.+.....+++..+++.++++.+.+.|++.+ +...
T Consensus 251 G~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~ 328 (409)
T PLN02656 251 GWFVTTDPSGSFRDPKIVERIKKYFDIL--GGPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKEIPCITCP 328 (409)
T ss_pred EEEEEeCcccccccHHHHHHHHHHHhhh--cCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCC
Confidence 99998521000 004555554332211 122222333444455432223357777888888999999998863 3322
Q ss_pred cCCCcceeEEEEeC
Q 014724 399 SGGSDNHLVLVDLR 412 (419)
Q Consensus 399 ~~~t~~hlv~vd~~ 412 (419)
........+|+++.
T Consensus 329 ~~p~gg~~~w~~l~ 342 (409)
T PLN02656 329 HKPEGSMAVMVKLN 342 (409)
T ss_pred cCCCeEEEEEEecc
Confidence 22345677999874
No 80
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.87 E-value=1e-19 Score=184.89 Aligned_cols=285 Identities=16% Similarity=0.109 Sum_probs=180.8
Q ss_pred hhcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChH-
Q 014724 102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS- 178 (419)
Q Consensus 102 ~~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt- 178 (419)
.+.++|..+... +++.+++++.+.+......+|+. ..|.. .+++.+++++.+.+|.+.+ ..-+|++++|+
T Consensus 33 ~~~~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~~---~lR~~ia~~l~~~~~~~~~-~~~~I~it~G~~ 105 (403)
T PRK08636 33 EDIIDFSMGNPDGPTPQHIIDKLCESAQKPKTHGYSV---SKGIY---KLRLAICNWYKRKYNVDLD-PETEVVATMGSK 105 (403)
T ss_pred CCEEEcCCcCCCCCCCHHHHHHHHHHhcCCccCCCCC---CCCCH---HHHHHHHHHHHHHhCCCCC-CCCeEEECCChH
Confidence 445777655422 46667777766543221224443 12333 5666777888887786532 10147777775
Q ss_pred HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCC-CCCCCCHHHH----HHHhhh--cC
Q 014724 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDML----EKTAIL--FR 251 (419)
Q Consensus 179 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~-~~~~iD~d~L----e~~l~~--~~ 251 (419)
+|+..++.++++|||.|++.+|+|..+.. .+...|. ++++++++. +++.+|++.+ ++.+++ .+
T Consensus 106 ~al~~~~~~l~~~gd~Vlv~~P~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~ 175 (403)
T PRK08636 106 EGYVHLVQAITNPGDVAIVPDPAYPIHSQ--------AFILAGG--NVHKMPLEYNEDFELDEDQFFENLEKALRESSPK 175 (403)
T ss_pred HHHHHHHHHhCCCCCEEEEcCCCCcchHH--------HHHhcCC--EEEEEeccccccCccChhhhhhHHHHHHhhccCC
Confidence 69999999999999999999999877642 2234565 444444432 3468898754 555543 36
Q ss_pred CeEEEEcCCCCCC--c---CChHHHHHHHHHhCCEEEEeccccccccccCCc-CCC--CC-CCc--EEEeCCCCcC--CC
Q 014724 252 PKLIIAGASAYPR--D---FDYPRMRQIADAVGALLMMDMAHISGLVAASVV-ADP--FK-YCD--VVTTTTHKSL--RG 318 (419)
Q Consensus 252 pklIi~~~s~~p~--~---~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~-~~~--~~-~~D--iv~~S~hK~l--~G 318 (419)
+++|++++|+||+ . ..+++|.++|++|+++||+|+++ ..+.+.+.. ++. ++ ..+ ++++|++|+| +|
T Consensus 176 ~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y-~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G 254 (403)
T PRK08636 176 PKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAY-ADITFDGYKTPSILEVEGAKDVAVESYTLSKSYNMAG 254 (403)
T ss_pred ceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccc-hhhccCCCCCCChhcCCCccccEEEEEecccccCCcc
Confidence 7889999999995 2 24678999999999999999994 455544321 111 22 223 4579999997 78
Q ss_pred CCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEe
Q 014724 319 PRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLV 398 (419)
Q Consensus 319 prgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~ 398 (419)
.|.||++.++ ++.+.+.........+.+.....++ ..++... ....++..+.+.++++.+.+.|++.|+++.
T Consensus 255 lRiG~iv~~~------~li~~~~~~~~~~~~~~~~~~q~~~-~~~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 326 (403)
T PRK08636 255 WRVGFVVGNK------KLVGALKKIKSWLDYGMFTPIQVAA-TIALDGD-QSCVEEIRETYRKRRDVLIESFANAGWELQ 326 (403)
T ss_pred ceeeeeeCCH------HHHHHHHHHHHHhcccCChHHHHHH-HHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHCCCccc
Confidence 9999999877 5666554432211112222222222 2233321 223456677788888999999999888765
Q ss_pred cCCCcceeEEEEeCC
Q 014724 399 SGGSDNHLVLVDLRP 413 (419)
Q Consensus 399 ~~~t~~hlv~vd~~~ 413 (419)
. .....++|+++.+
T Consensus 327 ~-p~~g~~~~~~l~~ 340 (403)
T PRK08636 327 K-PRASMFVWAKIPE 340 (403)
T ss_pred C-CCcceEEEEECCC
Confidence 4 2456779999864
No 81
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.87 E-value=4.4e-20 Score=193.41 Aligned_cols=306 Identities=17% Similarity=0.126 Sum_probs=191.4
Q ss_pred hhccccccChhHHHHHHHHHHHh----hhcccccccC-C---C-ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHH
Q 014724 79 VDYSLGEADPEVCEIITKEKERQ----FKSLELIASE-N---F-TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDEL 149 (419)
Q Consensus 79 ~~~~l~~~~~~~~~~~~~e~~r~----~~~i~L~~se-n---~-~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~l 149 (419)
.++++..+.+.+..-+..+.++. .+.|+|..|+ + + +|+.+++++.+.+.. ..+|+.. .| ..++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~G~p~~~~~~~p~~~~~~~~~~~~~--~~~Y~~~---~G---~~~l 190 (517)
T PRK13355 119 KSHKLDNVLYDVRGPVVDEANRMEAAGTHILKLNIGNPAPFGFRTPDEVVYDMAQQLTD--TEGYSDS---KG---LFSA 190 (517)
T ss_pred hhHHhhccCccHHHHHHHHHHHHHHcCCCeEEecCcCCCcCCCCCCHHHHHHHHHHhhc--CCCCCCC---cC---hHHH
Confidence 57778888888776554444333 3568888754 2 2 488999998877643 2245432 23 2356
Q ss_pred HHHHHHHHHHHcC--CCCCCCceeEecCCh-HHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEE
Q 014724 150 ETLCQKRALAAFN--LDENKWGVNVQPLSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFES 226 (419)
Q Consensus 150 E~~~~~~la~~~g--~~~~~~~v~V~~~sG-t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~ 226 (419)
.+.+.+++.+..+ ++++ +|++++| ++++..++.++++|||+|++++|.|..+.. .+...|. ++
T Consensus 191 Reaia~~~~~~~~~~~~~~----~I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~--------~~~~~g~--~~ 256 (517)
T PRK13355 191 RKAIMQYAQLKGLPNVDVD----DIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWTA--------CVNLAGG--TA 256 (517)
T ss_pred HHHHHHHHHhcCCCCCChh----HEEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHH--------HHHHCCC--EE
Confidence 6556566655443 4443 4777777 569999999999999999999998766532 2234555 55
Q ss_pred EecccCCC-CCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCC---hHHHHHHHHHhCCEEEEeccccccccccCC-cC
Q 014724 227 MPYRLDES-TGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASV-VA 299 (419)
Q Consensus 227 v~~~~~~~-~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~d---l~~I~~ia~~~ga~livD~ah~~Gl~~~g~-~~ 299 (419)
+.++++++ ++.+|++++++.+.. ++|+|++++|+||+ ..+ +++|.++|++||++||+|+++ ..+++.+. +.
T Consensus 257 v~~~~~~~~~~~~d~~~l~~~~~~-~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y-~~~~~~~~~~~ 334 (517)
T PRK13355 257 VHYRCDEQSEWYPDIDDIRSKITS-RTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIY-DRLVMDGLEHT 334 (517)
T ss_pred EEeecCcccCCCCCHHHHHHhcCc-CceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhh-hhhcCCCCCcc
Confidence 55555543 578999999998864 78999999999995 334 788999999999999999994 56665442 12
Q ss_pred CCCC-CCc---EEEeCCCCcC--CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHH
Q 014724 300 DPFK-YCD---VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK 373 (419)
Q Consensus 300 ~~~~-~~D---iv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~ 373 (419)
+... ..| ++++|++|++ +|+|.||++.+.......++.+.+....... .+ ++.....+...+|... ..++
T Consensus 335 s~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~i~~~~~~~~~~~~~~l~~~~~~~-~~-~~~~~q~a~~~aL~~~--~~~~ 410 (517)
T PRK13355 335 SIASLAPDLFCVTFSGLSKSHMIAGYRIGWMILSGNKRIAKDYIEGLNMLANMR-LC-SNVPAQSIVQTALGGH--QSVK 410 (517)
T ss_pred cHHHhCCCCeEEEEecchhhccCcccceEEEEeeCchhhHHHHHHHHHHHhcCc-CC-cChHHHHHHHHHhcCC--ccHH
Confidence 2111 123 3459999985 8999999986521000002333332211111 11 1222222333344321 1122
Q ss_pred HH---HHHHHHHHHHHHHHHHhC-CcEEecCCCcceeEEEEeCC
Q 014724 374 VY---QNKVVSNCRALASRLVEL-GYKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 374 ~~---~~~v~~n~~~l~~~L~~~-G~~v~~~~t~~hlv~vd~~~ 413 (419)
.+ .+++.++++++.+.|++. |+++..+ ..+.++|+++..
T Consensus 411 ~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p-~g~fy~~~~l~~ 453 (517)
T PRK13355 411 DYLVPGGRVYEQRELVYNALNAIPGISAVKP-KAAFYIFPKIDV 453 (517)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcccCCC-CeeeEEEeecCc
Confidence 22 234566788899999887 8887653 456678878753
No 82
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.86 E-value=4.1e-20 Score=187.13 Aligned_cols=270 Identities=15% Similarity=0.115 Sum_probs=179.2
Q ss_pred ccCCCC----hHHHHHHHhhhhhccCCCCCCCCCCCCch-hHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHH
Q 014724 109 ASENFT----SRAVMEAVGSCLTNKYSEGLPGKRYYGGN-EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 183 (419)
Q Consensus 109 ~sen~~----~~~V~eal~~~l~~~y~~g~p~~r~~~g~-~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~ 183 (419)
+|++|+ +|+++++..+.+. +|+.|+.++|.+.|+ ....++| +++++++|.+. .+.++||+.|+..
T Consensus 4 ~s~dyLgl~~~~~~~~~~~~a~~-~~g~~~~~sr~~yg~~~~~~~LE----~~lA~~~g~e~-----al~~~sG~~a~~~ 73 (392)
T PLN03227 4 ATHDFLSTSSSPTLRQTALESLS-HYGCGSCGPRGFYGTIDAHLELE----QCMAEFLGTES-----AILYSDGASTTSS 73 (392)
T ss_pred cCcCccCCCCCHHHHHHHHHHHH-HhCCCCcccccccCChHHHHHHH----HHHHHHhCCCc-----EEEecCcHHHHHH
Confidence 567775 6899999988884 577777776655443 3345666 67889999875 3888999999999
Q ss_pred HHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHH---Hhhh----------c
Q 014724 184 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEK---TAIL----------F 250 (419)
Q Consensus 184 ~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~---~l~~----------~ 250 (419)
++.++++|||+|++.++.|++.+. + +.+.+. .+..++.+ |++++++ .+.. .
T Consensus 74 ~i~~l~~~GD~Vl~~~~~h~s~~~-~-------~~l~~~--~~~~~~~~------d~~~l~~~~~~i~~~~~a~~~~~~~ 137 (392)
T PLN03227 74 TVAAFAKRGDLLVVDRGVNEALLV-G-------VSLSRA--NVRWFRHN------DMKDLRRVLEQVRAQDVALKRKPTD 137 (392)
T ss_pred HHHHhCCCCCEEEEeccccHHHHH-H-------HHHcCC--eEEEeCCC------CHHHHHHHHHHhhhhccccccccCC
Confidence 999999999999999988877642 1 223332 44444332 3444444 3321 2
Q ss_pred CCeEEEEcCCCCC--CcCChHHHHHHHHHhCCEEEEecccccccccc---CCcC----CCCCCCcEEEeCCCCcCCCCCe
Q 014724 251 RPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAA---SVVA----DPFKYCDVVTTTTHKSLRGPRG 321 (419)
Q Consensus 251 ~pklIi~~~s~~p--~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~---g~~~----~~~~~~Div~~S~hK~l~Gprg 321 (419)
++++|+++.+.++ ...|+++|+++|++||+++|+|++|..|..+. +... .|..++|++++|++|.+ ||.|
T Consensus 138 ~t~~vi~E~v~~~~G~i~~l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~-g~~g 216 (392)
T PLN03227 138 QRRFLVVEGLYKNTGTLAPLKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAF-GSVG 216 (392)
T ss_pred CcEEEEEcCCcCCCCcccCHHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhh-hccC
Confidence 4678888876554 46789999999999999999999997665432 1111 12237799999999976 7999
Q ss_pred eEEEEeCCCcchhhHHHHhhhcccCCCCCCC-hHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEec-
Q 014724 322 GMIFFKKDPVLGVELESAINNAVFPGLQGGP-HNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS- 399 (419)
Q Consensus 322 G~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p-~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~- 399 (419)
|++++++ ++.+.+.......+.++. +....++...++..... .++..++..++.++|.+.|++.++..+.
T Consensus 217 g~v~~~~------~~~~~~~~~~~~~~~~~~~~p~~~~aa~~al~~~~~--~~~~~~~l~~~~~~l~~~L~~~~~~~~~~ 288 (392)
T PLN03227 217 GMTVGSE------EVVDHQRLSGSGYCFSASAPPFLAKADATATAGELA--GPQLLNRLHDSIANLYSTLTNSSHPYALK 288 (392)
T ss_pred cEEecCH------HHHHHHHHhCcCccccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhcCCccccc
Confidence 9998877 555544322222233332 12222222335544332 2456788899999999999876554221
Q ss_pred --------CCCcceeEEEEeCC
Q 014724 400 --------GGSDNHLVLVDLRP 413 (419)
Q Consensus 400 --------~~t~~hlv~vd~~~ 413 (419)
..++++++.|.+.+
T Consensus 289 ~rg~~~~~~~~~~~i~~i~~~~ 310 (392)
T PLN03227 289 LRNRLVITSDPISPIIYLRLSD 310 (392)
T ss_pred cccccccCCCCCCCEEEEEeCC
Confidence 12467788888754
No 83
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.86 E-value=8.9e-20 Score=183.41 Aligned_cols=275 Identities=19% Similarity=0.211 Sum_probs=179.4
Q ss_pred hhcccccccCC--C-ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChH
Q 014724 102 FKSLELIASEN--F-TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS 178 (419)
Q Consensus 102 ~~~i~L~~sen--~-~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt 178 (419)
++.|+|..+++ + .+|.|++++.+.+. +|..+++..+...|.. .+.+.++++++++++.+. .+++++|+
T Consensus 39 ~~~id~~~~~~~g~~~~~~v~~a~~~~~~-~~~~~~~~~~~~~g~~---~~~~~l~~~la~~~~~~~-----~i~~~~g~ 109 (385)
T PRK05958 39 RRMLNFASNDYLGLARHPRLIAAAQQAAR-RYGAGSGGSRLVTGNS---PAHEALEEELAEWFGAER-----ALLFSSGY 109 (385)
T ss_pred ceEEEeeCCCcccCCCCHHHHHHHHHHHH-hcCCCCCCcCcccCCc---HHHHHHHHHHHHHhCCCc-----EEEECcHH
Confidence 34577776654 3 57899999998875 3433333323222322 222345577888888432 37788899
Q ss_pred HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhc--CCeEEE
Q 014724 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF--RPKLII 256 (419)
Q Consensus 179 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~--~pklIi 256 (419)
+++..++.++++|||+|++.++.|+++.. .+...|..+ +.++ ..|++.+++.++.. ++++++
T Consensus 110 ~~~~~~l~~~~~~gd~V~~~~~~~~~~~~--------~~~~~g~~~--~~~~------~~d~~~l~~~i~~~~~~~~lvi 173 (385)
T PRK05958 110 AANLAVLTALAGKGDLIVSDKLNHASLID--------GARLSRARV--RRYP------HNDVDALEALLAKWRAGRALIV 173 (385)
T ss_pred HHHHHHHHHhCCCCCEEEEeCccCHHHHH--------HHHhcCCce--EEeC------CCCHHHHHHHHHhccCCCeEEE
Confidence 98888888889999999999988876542 123345433 3322 24889999988653 345666
Q ss_pred EcCCCCC--CcCChHHHHHHHHHhCCEEEEecccccccccc-CC-cCC--CCC-C-CcEEEeCCCCcCCCCCeeEEEEeC
Q 014724 257 AGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAA-SV-VAD--PFK-Y-CDVVTTTTHKSLRGPRGGMIFFKK 328 (419)
Q Consensus 257 ~~~s~~p--~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~-g~-~~~--~~~-~-~Div~~S~hK~l~GprgG~i~~~~ 328 (419)
++.+.++ ...++++|.++|++||++||+|++|..|.... +. ... .++ . .+++++|+||+| |+.||+++.++
T Consensus 174 ~~~~~~~~G~~~~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~-~~~Gg~~~~~~ 252 (385)
T PRK05958 174 TESVFSMDGDLAPLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKAL-GSSGAAVLGSE 252 (385)
T ss_pred EEecccCCCCcCCHHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhc-ccCCcEEEcCH
Confidence 6655554 36789999999999999999999987664421 11 111 122 2 348899999999 56789988876
Q ss_pred CCcchhhHHHHhhhcccCCC-CCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeE
Q 014724 329 DPVLGVELESAINNAVFPGL-QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLV 407 (419)
Q Consensus 329 ~~~~~~~l~~~i~~~~~~~~-~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv 407 (419)
++.+.+.....+.. .++++....+++..+++..... +...+++.++++++.+.|++.|+++.. ...+++
T Consensus 253 ------~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~--~~~~~~ 322 (385)
T PRK05958 253 ------TLIDYLINRARPFIFTTALPPAQAAAARAALRILRRE--PERRERLAALIARLRAGLRALGFQLMD--SQSAIQ 322 (385)
T ss_pred ------HHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHcCCCcCC--CCCCEE
Confidence 56665543222222 2233444444444566654321 456788888999999999998988654 345677
Q ss_pred EEEeC
Q 014724 408 LVDLR 412 (419)
Q Consensus 408 ~vd~~ 412 (419)
++.+.
T Consensus 323 ~~~~~ 327 (385)
T PRK05958 323 PLIVG 327 (385)
T ss_pred EEEeC
Confidence 87764
No 84
>PLN02187 rooty/superroot1
Probab=99.86 E-value=7.3e-20 Score=189.01 Aligned_cols=290 Identities=13% Similarity=0.077 Sum_probs=181.9
Q ss_pred hhcccccccC-C----C-ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecC
Q 014724 102 FKSLELIASE-N----F-TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPL 175 (419)
Q Consensus 102 ~~~i~L~~se-n----~-~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~ 175 (419)
++.|.|..++ + + +++.+.+++.+.+......+|.. ..| ..++++.+.+++.+.++.+.+ . .+|+++
T Consensus 66 ~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G---~~~lR~aiA~~~~~~~~~~~~-~-~~I~it 137 (462)
T PLN02187 66 KTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGKGNSYGP---GAG---ILPARRAVADYMNRDLPHKLT-P-EDIFLT 137 (462)
T ss_pred CCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC---CCC---hHHHHHHHHHHHHHhcCCCCC-c-ccEEEe
Confidence 4568887764 2 2 46788888887765332223322 123 235666666666665554322 1 246667
Q ss_pred Ch-HHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCC-CCCCCCHHHHHHHhhhcCCe
Q 014724 176 SG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPK 253 (419)
Q Consensus 176 sG-t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~-~~~~iD~d~Le~~l~~~~pk 253 (419)
+| ++|+..++.++++|||+|++++|.|..+.. .+...|..+..++ +.+ +++.+|+++|++++++ +++
T Consensus 138 ~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~y~~--------~~~~~g~~~~~~~--l~~~~~~~~d~~~l~~~~~~-~~~ 206 (462)
T PLN02187 138 AGCNQGIEIVFESLARPNANILLPRPGFPHYDA--------RAAYSGLEVRKFD--LLPEKEWEIDLEGIEAIADE-NTV 206 (462)
T ss_pred CCHHHHHHHHHHHhcCCCCEEEEeCCCCccHHH--------HHHHcCCEEEEEe--CccccCCccCHHHHHHhcCC-CcE
Confidence 66 579999999999999999999998876531 1234565444444 432 3578999999998864 788
Q ss_pred EEEEcCCCCCC--cC---ChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC----CC-cEEEeCCCCcC--CCCCe
Q 014724 254 LIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----YC-DVVTTTTHKSL--RGPRG 321 (419)
Q Consensus 254 lIi~~~s~~p~--~~---dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~----~~-Div~~S~hK~l--~Gprg 321 (419)
+|++++|+||+ .. ++++|.++|++||++||+|++| ..+++.+....++. .. -++++|++|+| +|+|.
T Consensus 207 ~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y-~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~pGlRi 285 (462)
T PLN02187 207 AMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVY-DRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVPGWKI 285 (462)
T ss_pred EEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccc-cccccCCCCceeHHHhccCCcEEEEecchhhcCCcccee
Confidence 99999999995 33 4788999999999999999994 56665432111221 11 27789999985 89999
Q ss_pred eEEEEeCCCcchhhHHHHhhhcccCC-CCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEE-ec
Q 014724 322 GMIFFKKDPVLGVELESAINNAVFPG-LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKL-VS 399 (419)
Q Consensus 322 G~i~~~~~~~~~~~l~~~i~~~~~~~-~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v-~~ 399 (419)
||+++.++... .++.+.+.....+. ...+++.....++..++.......+++..+.+.++++.+.+.|++.+..+ ..
T Consensus 286 G~~v~~~p~~~-~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~~~~~~~~~ 364 (462)
T PLN02187 286 GWIALNDPEGV-FETTKVLQSIKQNLDVTPDPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKDIPCVVCPK 364 (462)
T ss_pred EEEEecCchhH-HHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCC
Confidence 99998542100 01222333222221 11122333344444455432123357777888999999999999875432 22
Q ss_pred CCCcceeEEEEeC
Q 014724 400 GGSDNHLVLVDLR 412 (419)
Q Consensus 400 ~~t~~hlv~vd~~ 412 (419)
......++|+++.
T Consensus 365 ~P~gg~fl~~~l~ 377 (462)
T PLN02187 365 KPESCTYLLTKLE 377 (462)
T ss_pred CCCEeEEEEeecC
Confidence 2234567888764
No 85
>PLN02483 serine palmitoyltransferase
Probab=99.86 E-value=5.4e-20 Score=191.04 Aligned_cols=273 Identities=20% Similarity=0.206 Sum_probs=171.6
Q ss_pred hcccccccCCCC-----hHHHHHHHhhhhhccCCCCCCCCCCCCc-hhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCC
Q 014724 103 KSLELIASENFT-----SRAVMEAVGSCLTNKYSEGLPGKRYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQPLS 176 (419)
Q Consensus 103 ~~i~L~~sen~~-----~~~V~eal~~~l~~~y~~g~p~~r~~~g-~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~s 176 (419)
+.|+| +|.||+ ++.+.+++.+.+. +|..+..++|...| .....++| +.+++++|.+. .+++++
T Consensus 101 ~~~n~-~s~~YLgl~~~~~~~~~~~~~ai~-~~g~~~~~sr~~~g~~~~~~ele----~~lA~~~g~~~-----ai~~~~ 169 (489)
T PLN02483 101 RCLNL-GSYNYLGFAAADEYCTPRVIESLK-KYSASTCSSRVDGGTTKLHRELE----ELVARFVGKPA-----AIVFGM 169 (489)
T ss_pred eEEEe-ecCCccCcCCCCHHHHHHHHHHHH-HhCCCCCccccccCCcHHHHHHH----HHHHHHhCCCc-----EEEECC
Confidence 44665 445553 2333444444332 35445556664444 34445555 67888999654 378899
Q ss_pred hHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhh------c
Q 014724 177 GSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL------F 250 (419)
Q Consensus 177 Gt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~------~ 250 (419)
|+.++..++.++++|||.|++.++.|.+... .+...|.. ++.++. .|.+++++.+++ .
T Consensus 170 G~~an~~~i~al~~~Gd~Vi~d~~~h~s~~~--------~~~~~Ga~--v~~~~~------~d~~~le~~l~~~i~~~~p 233 (489)
T PLN02483 170 GYATNSTIIPALIGKGGLIISDSLNHNSIVN--------GARGSGAT--IRVFQH------NTPSHLEEVLREQIAEGQP 233 (489)
T ss_pred HHHHHHHHHHHhCCCCCEEEEcchhhHHHHH--------HHHHcCCe--EEEEeC------CCHHHHHHHHHhhhhcccc
Confidence 9999999999999999999999998877642 23455654 444433 256666665542 1
Q ss_pred C-----CeEEEEcCCCC---CCcCChHHHHHHHHHhCCEEEEecccccccccc---CCcC-CCC--CCCcEEEeCCCCcC
Q 014724 251 R-----PKLIIAGASAY---PRDFDYPRMRQIADAVGALLMMDMAHISGLVAA---SVVA-DPF--KYCDVVTTTTHKSL 316 (419)
Q Consensus 251 ~-----pklIi~~~s~~---p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~---g~~~-~~~--~~~Div~~S~hK~l 316 (419)
+ .|++++..+.+ +...++++|.++|++||++|++|++|..|..+. +... ..+ .+.||+++|+||+|
T Consensus 234 ~t~~p~~k~livve~v~s~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~ 313 (489)
T PLN02483 234 RTHRPWKKIIVIVEGIYSMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSF 313 (489)
T ss_pred ccccCCceEEEEECCCCCCCCcccCHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhc
Confidence 1 15555544343 345689999999999999999999997654321 1111 111 25789999999998
Q ss_pred CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCC-CCChHHHHHHHHHHHHHhcC----hHHHHHHHHHHHHHHHHHHHHH
Q 014724 317 RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQ-GGPHNHTIGGLAVCLKHAQS----PEFKVYQNKVVSNCRALASRLV 391 (419)
Q Consensus 317 ~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~-g~p~~~~iaala~al~~~~~----~~~~~~~~~v~~n~~~l~~~L~ 391 (419)
|+.||++++++ ++.+.+......... ++..+...+++..+++.+.. +...+..+++.+++++|.+.|+
T Consensus 314 -g~~GG~i~~~~------~li~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~ 386 (489)
T PLN02483 314 -GSCGGYIAGSK------ELIQYLKRTCPAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQ 386 (489)
T ss_pred -ccCceEEEcCH------HHHHHHHHhCccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHH
Confidence 56789999887 677776653222211 22223333334445654431 1234567889999999999999
Q ss_pred hCCcEEecCCCcceeEEEE
Q 014724 392 ELGYKLVSGGSDNHLVLVD 410 (419)
Q Consensus 392 ~~G~~v~~~~t~~hlv~vd 410 (419)
+.|+++... .++..+++-
T Consensus 387 ~~G~~v~~~-~~sp~~~l~ 404 (489)
T PLN02483 387 KMGFEVLGD-NDSPVMPIM 404 (489)
T ss_pred HCCCcccCC-CCCCEEEEE
Confidence 999987642 344555543
No 86
>PRK10534 L-threonine aldolase; Provisional
Probab=99.86 E-value=3.7e-20 Score=183.15 Aligned_cols=271 Identities=17% Similarity=0.167 Sum_probs=171.0
Q ss_pred ccccccCCC-ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHH
Q 014724 105 LELIASENF-TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 183 (419)
Q Consensus 105 i~L~~sen~-~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~ 183 (419)
|+|..++|+ +||.+++++....... ..| +......+|| +.+++++|++. + +++.+|+.++..
T Consensus 2 ~~~~~~~~~~p~~~~~~a~~~~~~~~--~~Y------~~~~~~~~L~----~~la~~~g~~~----~-~v~~~g~~a~~~ 64 (333)
T PRK10534 2 IDLRSDTVTRPSRAMLEAMMAAPVGD--DVY------GDDPTVNALQ----DYAAELSGKEA----A-LFLPTGTQANLV 64 (333)
T ss_pred cccccccCCCCCHHHHHHHHhccCCC--ccc------CCCHHHHHHH----HHHHHHhCCCe----E-EEeCchHHHHHH
Confidence 456666665 7899999987644321 122 2223345565 56788899876 3 567788889998
Q ss_pred HHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhc-----CCeEEEEc
Q 014724 184 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-----RPKLIIAG 258 (419)
Q Consensus 184 ~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~-----~pklIi~~ 258 (419)
++.++++|||+|+++.|.|...+..+ .....+ ..+.++++++ +++.+|+++|++++.+. ++++|+++
T Consensus 65 ~l~~~~~~gd~vi~~~~~~~~~~~~~------~~~~~~-~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~ 136 (333)
T PRK10534 65 ALLSHCERGEEYIVGQAAHNYLYEAG------GAAVLG-SIQPQPIDAA-ADGTLPLDKVAAKIKPDDIHFARTRLLSLE 136 (333)
T ss_pred HHHHhcCCCCeeEEechhhhhHhcCC------chHHhc-CceEEeecCC-CCCCCCHHHHHHhhcccCcCcccceEEEEe
Confidence 88899999999998877653211110 011122 1245555555 46899999999988642 57899999
Q ss_pred CCCCCCcCCh---HHHHHHHHHhCCEEEEecccccccccc-CCcCCCC-CCCcEEEeCCCCcCCCCCeeEEEEeCCCcch
Q 014724 259 ASAYPRDFDY---PRMRQIADAVGALLMMDMAHISGLVAA-SVVADPF-KYCDVVTTTTHKSLRGPRGGMIFFKKDPVLG 333 (419)
Q Consensus 259 ~s~~p~~~dl---~~I~~ia~~~ga~livD~ah~~Gl~~~-g~~~~~~-~~~Div~~S~hK~l~GprgG~i~~~~~~~~~ 333 (419)
+|+++...+. ++|.++|+++|++|++|+||..+.... +.....+ .+.|.++.|+||.++.+.||++++++
T Consensus 137 np~~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~~~~~~~~~s~SK~~~~~~G~~~~~~~----- 211 (333)
T PRK10534 137 NTHNGKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCELKEITQYCDSFTICLSKGLGTPVGSLLVGNR----- 211 (333)
T ss_pred cCCCCeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHHHHhcCCEEEEEeEcCCCCcccceEEcCH-----
Confidence 8888876665 556678899999999999976432110 1100011 24576667899988766666787776
Q ss_pred hhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeEEEEeC
Q 014724 334 VELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 334 ~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~vd~~ 412 (419)
++.+.+.....+.. ++...+.. +.+.++..+. +..++.++..++++++.+.|++.|+++.. ++++++|+++.
T Consensus 212 -~~i~~~~~~~~~~~-~~~~~~~~-~~a~~~~~l~--~~~~~~~~~~~~r~~l~~~L~~~g~~~~~--~~~nfv~~~~~ 283 (333)
T PRK10534 212 -DYIKRARRWRKMTG-GGMRQAGI-LAAAGLYALK--HNVARLQEDHDNAAWLAEQLREAGADVMR--QDTNMLFVRVG 283 (333)
T ss_pred -HHHHHHHHHHHHhC-CchhhHHH-HHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHhCCCccCC--CCceEEEEECC
Confidence 66666655433221 11111111 1111222221 12344555667789999999999998775 36889999886
No 87
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.86 E-value=1.6e-19 Score=182.62 Aligned_cols=304 Identities=16% Similarity=0.112 Sum_probs=193.6
Q ss_pred hccccccChhHHHHHHHHHHH----hhhcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHH
Q 014724 80 DYSLGEADPEVCEIITKEKER----QFKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLC 153 (419)
Q Consensus 80 ~~~l~~~~~~~~~~~~~e~~r----~~~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~ 153 (419)
++++..+++..+.-+.+...+ ....++|..+++. +++.+.+++.+.+.+.. ..|+.. .| ...+++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~~---~g---~~~lr~~i 77 (393)
T PRK05764 5 SKRVSRVTPSATLAVTAKAKELKAQGRDVISLGAGEPDFDTPEHIKEAAIEALDDGK-TKYTPA---AG---IPELREAI 77 (393)
T ss_pred hhhhhhcCchHHHHHHHHHHHHHhccCCEEEeCCCCCCCCCCHHHHHHHHHHHhcCC-CCcCCC---CC---hHHHHHHH
Confidence 455666666654333322221 1345777766643 46889899887765422 234321 12 34676666
Q ss_pred HHHHHHHcCCCCCCCceeEecCCh-HHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccC
Q 014724 154 QKRALAAFNLDENKWGVNVQPLSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD 232 (419)
Q Consensus 154 ~~~la~~~g~~~~~~~v~V~~~sG-t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~ 232 (419)
.+++.+.+|...+ . .++.+++| ++|+..++.+++++||.|++++|.|.++.. .+...|. ++++++.+
T Consensus 78 a~~~~~~~~~~~~-~-~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~y~~~~~--------~~~~~g~--~~~~~~~~ 145 (393)
T PRK05764 78 AAKLKRDNGLDYD-P-SQVIVTTGAKQALYNAFMALLDPGDEVIIPAPYWVSYPE--------MVKLAGG--VPVFVPTG 145 (393)
T ss_pred HHHHHHHhCCCCC-H-HHEEEeCCcHHHHHHHHHHhcCCCCEEEecCCCCcchHH--------HHHHcCC--EEEEEecC
Confidence 6777666664321 1 13555555 679999999999999999999998766531 1234565 44455554
Q ss_pred C-CCCCCCHHHHHHHhhhcCCeEEEEcCCCCCCc-----CChHHHHHHHHHhCCEEEEeccccccccccCCc-CC--CC-
Q 014724 233 E-STGLVDYDMLEKTAILFRPKLIIAGASAYPRD-----FDYPRMRQIADAVGALLMMDMAHISGLVAASVV-AD--PF- 302 (419)
Q Consensus 233 ~-~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~~-----~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~-~~--~~- 302 (419)
+ +++.+|++++++.+++ ++++|++++|+||+- .++++|.++|++||+++++|++|. .+.+.+.. .. .+
T Consensus 146 ~~~~~~~d~~~l~~~l~~-~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~ 223 (393)
T PRK05764 146 EENGFKLTVEQLEAAITP-KTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYE-KLVYDGAEFTSIASLS 223 (393)
T ss_pred cccCCcCCHHHHHHhhCc-cceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEecccc-ceeeCCCCcccHHHcC
Confidence 3 3468999999998864 789999999998852 257899999999999999999963 44443221 11 11
Q ss_pred -C--CCcEEEeCCCCcC--CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHH
Q 014724 303 -K--YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQN 377 (419)
Q Consensus 303 -~--~~Div~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~ 377 (419)
+ ..+++++|++|++ +|+|.|+++.++ ++.+.+.........+ ++.....+...++.. ....+++..+
T Consensus 224 ~~~~~~~i~~~s~SK~~~~~G~RiG~i~~~~------~~~~~~~~~~~~~~~~-~~~~~q~~~~~~l~~-~~~~~~~~~~ 295 (393)
T PRK05764 224 PELRDRTITVNGFSKAYAMTGWRLGYAAGPK------ELIKAMSKLQSHSTSN-PTSIAQYAAVAALNG-PQDEVEEMRQ 295 (393)
T ss_pred CCCcCCEEEEecCcccccCccceeEEEecCH------HHHHHHHHHHhhcccC-CChHHHHHHHHHHcC-ChHHHHHHHH
Confidence 1 3468899999986 677889999876 5666665433222222 222222222333432 1233466677
Q ss_pred HHHHHHHHHHHHHHhC-CcEEecCCCcceeEEEEeCC
Q 014724 378 KVVSNCRALASRLVEL-GYKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 378 ~v~~n~~~l~~~L~~~-G~~v~~~~t~~hlv~vd~~~ 413 (419)
++.++++.+.+.|++. |+++.. +..+.++|+++..
T Consensus 296 ~~~~~~~~l~~~L~~~~g~~~~~-~~g~~~~~~~~~~ 331 (393)
T PRK05764 296 AFEERRDLMVDGLNEIPGLECPK-PEGAFYVFPNVSK 331 (393)
T ss_pred HHHHHHHHHHHHHhhCCCCcccC-CCcceEEEEeccc
Confidence 7888889999999987 888765 3455678888865
No 88
>PRK07550 hypothetical protein; Provisional
Probab=99.86 E-value=3e-19 Score=180.37 Aligned_cols=281 Identities=15% Similarity=0.071 Sum_probs=182.0
Q ss_pred hcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCCh-HH
Q 014724 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-SP 179 (419)
Q Consensus 103 ~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sG-t~ 179 (419)
..|+|..+++. .++.+.+++.+.+.+.....|+. ..|. .++++.+.+++.+.+|..... .+|++++| ++
T Consensus 30 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~---~~lr~~ia~~~~~~~g~~~~~--~~i~~t~G~~~ 101 (386)
T PRK07550 30 PLIDLSQAVPGYPPPPELLRALAEAAADPAAHLYGP---VEGL---PELREAYAAHYSRLYGAAISP--EQVHITSGCNQ 101 (386)
T ss_pred CeEEeCCCCCCCCCCHHHHHHHHHHHhCcCCcCCCC---CCCC---HHHHHHHHHHHHHHhCCCCCc--ceEEEecCcHH
Confidence 45777777643 46888888877653221112321 1233 367777778888877755421 24666776 57
Q ss_pred HHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCC-CCCCCCHHHHHHHhhhcCCeEEEEc
Q 014724 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKLIIAG 258 (419)
Q Consensus 180 A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~-~~~~iD~d~Le~~l~~~~pklIi~~ 258 (419)
|+..++.++++|||+|++++|.+..+.. .+...|. ++++++.++ +++.+|++++++.+++ ++++|++.
T Consensus 102 al~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~~~~~l~~~~~~-~~~~v~~~ 170 (386)
T PRK07550 102 AFWAAMVTLAGAGDEVILPLPWYFNHKM--------WLDMLGI--RPVYLPCDEGPGLLPDPAAAEALITP-RTRAIALV 170 (386)
T ss_pred HHHHHHHHhcCCCCEEEEcCCCCcchHH--------HHHhcCC--EEEEEecCCCcCCCCCHHHHHHHhcc-cCcEEEEe
Confidence 9999999999999999999998766531 1234555 555555653 3567899999999875 78888888
Q ss_pred CCCCCCc--C---ChHHHHHHHHHhCCEEEEeccccccccccCCcC-CCCC----C-CcEEEeCCCCcC--CCCCeeEEE
Q 014724 259 ASAYPRD--F---DYPRMRQIADAVGALLMMDMAHISGLVAASVVA-DPFK----Y-CDVVTTTTHKSL--RGPRGGMIF 325 (419)
Q Consensus 259 ~s~~p~~--~---dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~-~~~~----~-~Div~~S~hK~l--~GprgG~i~ 325 (419)
+|+||+- . ++++|.++|+++|++||+|+++ .++...+..+ ..+. + -.+++.|++|++ +|.|.|+++
T Consensus 171 ~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y-~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~ 249 (386)
T PRK07550 171 TPNNPTGVVYPPELLHELYDLARRHGIALILDETY-RDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVV 249 (386)
T ss_pred CCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccc-hhhccCCCCCcchhhCCCccccEEEEecchhhccCcccceEeee
Confidence 8899852 3 4789999999999999999995 3443322111 1111 1 236799999987 588999999
Q ss_pred EeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEEecCCCcc
Q 014724 326 FKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDN 404 (419)
Q Consensus 326 ~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~~~~t~~ 404 (419)
+++ ++.+.+.........+.+.. ...++..++... ....++..+++.++++.+.+.|.+. ++.+.+ ...
T Consensus 250 ~~~------~~~~~~~~~~~~~~~~~s~~-~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~g~ 319 (386)
T PRK07550 250 ASP------ARIAEIEKFMDTVAICAPRI-GQIAVAWGLPNL-ADWRAGNRAEIARRRDAFRAVFARLPGWELLA--SGA 319 (386)
T ss_pred cCH------HHHHHHHHHHhhcccCCCcH-HHHHHHHHhccH-HHHHHHHHHHHHHHHHHHHHHHHhCCCceeCC--Cce
Confidence 976 56555544332222222222 222333344332 1223455667778888899999885 776543 345
Q ss_pred eeEEEEeCC
Q 014724 405 HLVLVDLRP 413 (419)
Q Consensus 405 hlv~vd~~~ 413 (419)
.++|+++..
T Consensus 320 ~~~~~~~~~ 328 (386)
T PRK07550 320 YFAYVRHPF 328 (386)
T ss_pred EEEEecCCC
Confidence 788988753
No 89
>PRK09148 aminotransferase; Validated
Probab=99.86 E-value=2.5e-19 Score=182.21 Aligned_cols=284 Identities=13% Similarity=0.054 Sum_probs=177.5
Q ss_pred hhcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCCh-H
Q 014724 102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-S 178 (419)
Q Consensus 102 ~~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sG-t 178 (419)
...|+|..+++. +++.+++++.+.+.+....+|+.. .|. .++++.+.+++.+.+|.+.+ +..+|++++| +
T Consensus 30 ~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~---~G~---~~lr~aia~~~~~~~g~~~~-~~~~I~it~G~~ 102 (405)
T PRK09148 30 ADIIDLGMGNPDLPTPQHIVDKLCETAQDPRTHRYSAS---KGI---PGLRRAQAAYYARRFGVKLN-PDTQVVATLGSK 102 (405)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHcCcccCCCCCC---CCC---HHHHHHHHHHHHHHhCCCCC-CCCcEEEcCChH
Confidence 345788776642 468888888776543222234431 233 25666677777776676432 1114667777 5
Q ss_pred HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCC-CCCCCHHHHHHHhhhcCCeEEEE
Q 014724 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIA 257 (419)
Q Consensus 179 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~-~~~iD~d~Le~~l~~~~pklIi~ 257 (419)
+|+..++.+++++||+|++++|+|..+.. .+...|. ++++++.+.+ ++..+++++.+... .++++|++
T Consensus 103 ~al~~~~~~l~~~gd~Vl~~~P~y~~~~~--------~~~~~g~--~v~~v~~~~~~~~~~~l~~~~~~~~-~~~~~v~l 171 (405)
T PRK09148 103 EGFANMAQAITAPGDVILCPNPSYPIHAF--------GFIMAGG--VIRSVPAEPDEEFFPALERAVRHSI-PKPIALIV 171 (405)
T ss_pred HHHHHHHHHhcCCCCEEEEcCCCCcccHH--------HHHhcCC--EEEEEeCCCCCCCccCHHHHHhhcc-ccceEEEE
Confidence 69999999999999999999998876532 1234555 4445545432 23344444333222 36789999
Q ss_pred cCCCCCC--cCC---hHHHHHHHHHhCCEEEEeccccccccccCC-cCCC--CCC---CcEEEeCCCCcC--CCCCeeEE
Q 014724 258 GASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASV-VADP--FKY---CDVVTTTTHKSL--RGPRGGMI 324 (419)
Q Consensus 258 ~~s~~p~--~~d---l~~I~~ia~~~ga~livD~ah~~Gl~~~g~-~~~~--~~~---~Div~~S~hK~l--~GprgG~i 324 (419)
++|+||+ ..+ +++|.++|++||++||+|+++ ..+.+.+. .++. +++ ..++++|+||++ +|.|.||+
T Consensus 172 ~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y-~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~ 250 (405)
T PRK09148 172 NYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAY-SEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFA 250 (405)
T ss_pred eCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccc-hhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcchheeee
Confidence 9999985 334 468899999999999999995 45544332 1111 121 236689999987 78899999
Q ss_pred EEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcc
Q 014724 325 FFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDN 404 (419)
Q Consensus 325 ~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~ 404 (419)
++++ ++.+.+.........+.+... ..++..++... ....++.++++.++++.+.+.|++.|+.+.. ....
T Consensus 251 v~~~------~~i~~l~~~~~~~~~~~~~~~-q~~~~~~L~~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-p~~g 321 (405)
T PRK09148 251 VGNE------RLIAALTRVKSYLDYGAFTPI-QVAATAALNGP-QDCIAEMRELYKKRRDVLVESFGRAGWDIPP-PAAS 321 (405)
T ss_pred eCCH------HHHHHHHHHHHHhccCCChHH-HHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHcCCccCC-CCee
Confidence 9877 566666543221111112222 22223234321 1234667778888999999999998987543 2445
Q ss_pred eeEEEEeCC
Q 014724 405 HLVLVDLRP 413 (419)
Q Consensus 405 hlv~vd~~~ 413 (419)
.++|+++.+
T Consensus 322 ~f~~~~l~~ 330 (405)
T PRK09148 322 MFAWAPIPE 330 (405)
T ss_pred EEEEEECCC
Confidence 679998864
No 90
>PLN02368 alanine transaminase
Probab=99.86 E-value=9.4e-20 Score=185.07 Aligned_cols=244 Identities=10% Similarity=0.019 Sum_probs=162.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCceeEecCChH-HHHHHHHHHcc-CCCCEEEEeCCCCCccccCcccccccccccccccc
Q 014724 147 DELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAIL-KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYF 224 (419)
Q Consensus 147 ~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt-~A~~~~~~all-~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~ 224 (419)
.++.+.+.+++.+.+|++.+. .+|++++|+ +|+..++.+++ +|||+|++++|.|..+.. .+...|.
T Consensus 110 ~~LR~aia~~~~~~~g~~~~~--~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~~--------~~~~~g~-- 177 (407)
T PLN02368 110 PGVRKEVAEFIERRDGYPSDP--ELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYSA--------TISLLGG-- 177 (407)
T ss_pred HHHHHHHHHHHHHhcCCCCCh--hhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHHH--------HHHHcCC--
Confidence 367767778887777854321 247777775 69999999988 799999999998876642 2344565
Q ss_pred EEEecccCCC-CCCCCHHHHHHHhhhc-----CCeEEEEcCCCCCC--c---CChHHHHHHHHHhCCEEEEecccccccc
Q 014724 225 ESMPYRLDES-TGLVDYDMLEKTAILF-----RPKLIIAGASAYPR--D---FDYPRMRQIADAVGALLMMDMAHISGLV 293 (419)
Q Consensus 225 ~~v~~~~~~~-~~~iD~d~Le~~l~~~-----~pklIi~~~s~~p~--~---~dl~~I~~ia~~~ga~livD~ah~~Gl~ 293 (419)
++++++++++ ++.+|++.|++.++.. ++|++++++|+||+ . ..+++|.++|++||++||+|++ |..++
T Consensus 178 ~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~-Y~~l~ 256 (407)
T PLN02368 178 TLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEV-YQQNI 256 (407)
T ss_pred EEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcc-ccccc
Confidence 5555555543 4789999999988631 68999999999995 2 3467889999999999999999 45666
Q ss_pred ccCC--cCCC------C----C-C-CcEEEeCCCCcC---CCCCeeEEEE---eCCCcchhhHHHHhhhcccCCCCCCCh
Q 014724 294 AASV--VADP------F----K-Y-CDVVTTTTHKSL---RGPRGGMIFF---KKDPVLGVELESAINNAVFPGLQGGPH 353 (419)
Q Consensus 294 ~~g~--~~~~------~----~-~-~Div~~S~hK~l---~GprgG~i~~---~~~~~~~~~l~~~i~~~~~~~~~g~p~ 353 (419)
+.+. +.+. + + + .-|+++|+||+| +|+|.||+++ ++ ++.+.+...... ..+.+.
T Consensus 257 y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~------~li~~~~~~~~~-~~~~~~ 329 (407)
T PLN02368 257 YQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPP------KTVEEIYKVASI-ALSPNV 329 (407)
T ss_pred cCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCH------HHHHHHHHHhcc-cCCCCc
Confidence 5442 1111 1 1 1 127789999986 6999999985 44 566665553211 122222
Q ss_pred HHHHHHHHHHHHHhc--C-------hHHHHHHHHHHHHHHHHHHHHHhC-CcEEecCCCcceeEEEEeC
Q 014724 354 NHTIGGLAVCLKHAQ--S-------PEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 354 ~~~iaala~al~~~~--~-------~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~~~~t~~hlv~vd~~ 412 (419)
.. ..++..++..-. + ++.+++.+.++++++.+.+.|++. |+.+.. .....++|+|+.
T Consensus 330 ~~-Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~~~-P~Gafy~~~~i~ 396 (407)
T PLN02368 330 SG-QIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVVCNF-TEGAMYSFPQIK 396 (407)
T ss_pred HH-HHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEeCC-CCeeeEeccCCC
Confidence 22 333333443210 0 112345677888899999999996 888764 234677887664
No 91
>PRK06855 aminotransferase; Validated
Probab=99.86 E-value=1.5e-19 Score=185.37 Aligned_cols=289 Identities=16% Similarity=0.104 Sum_probs=178.6
Q ss_pred hcccccccCC-----CChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCCh
Q 014724 103 KSLELIASEN-----FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG 177 (419)
Q Consensus 103 ~~i~L~~sen-----~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sG 177 (419)
..+.|..++. .+|+.+.+++.+.+.+....+|+. ..|. .++.+.+.+++.+.+|++.+ + .+|++++|
T Consensus 33 ~~~~~~~G~p~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~---~~G~---~~LReaia~~~~~~~g~~~~-~-~~I~it~G 104 (433)
T PRK06855 33 KITWENIGDPIAKGEKIPDWMKEIVAELVMDDKSYGYCP---TKGV---LETREFLAELNNKRGGAQIT-P-DDIIFFNG 104 (433)
T ss_pred cccccccCCCcccCCCCCHHHHHHHHHHhhcCCCCCCCC---CCCC---HHHHHHHHHHHHhccCCCCC-H-hHEEEcCc
Confidence 4567755543 468888888887664322223432 1233 36666777888777776542 1 24677777
Q ss_pred H-HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCC-CCCCCCHHHHHHHhhh-cCCeE
Q 014724 178 S-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAIL-FRPKL 254 (419)
Q Consensus 178 t-~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~-~~~~iD~d~Le~~l~~-~~pkl 254 (419)
+ +|+..++. +++|||.|++.+|.|.++.. ......+.+.+++++++ +++.+|+++|++.++. .++|+
T Consensus 105 ~~~al~~~~~-l~~~Gd~Vlv~~P~Y~~~~~---------~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~ 174 (433)
T PRK06855 105 LGDAIAKIYG-LLRREARVIGPSPAYSTHSS---------AEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYNPSIAG 174 (433)
T ss_pred HHHHHHHHHH-hcCCCCeEEEeCCCCchHHH---------HHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcCCCceE
Confidence 5 68887774 88999999999998876431 11111223555555654 3467999999999864 25788
Q ss_pred EEEcCCCCCC--cC---ChHHHHHHHHHhCCEEEEeccccccccccCCcCCCC----CC-CcEEEeCCCCcC--CCCCee
Q 014724 255 IIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF----KY-CDVVTTTTHKSL--RGPRGG 322 (419)
Q Consensus 255 Ii~~~s~~p~--~~---dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~----~~-~Div~~S~hK~l--~GprgG 322 (419)
+++++|+||+ .. .+++|.++|++||++||+|++ |..+.+.+....++ +. ..|+++|++|+| +|+|.|
T Consensus 175 i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~-Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG 253 (433)
T PRK06855 175 ILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEI-YNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRCG 253 (433)
T ss_pred EEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecc-ccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceEE
Confidence 8888999996 23 367888999999999999999 45666544211121 12 238899999987 799999
Q ss_pred EEEEeCCC--cchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhc-ChHHHHHHHHHHHHHHHHHHHHHhC-CcEEe
Q 014724 323 MIFFKKDP--VLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ-SPEFKVYQNKVVSNCRALASRLVEL-GYKLV 398 (419)
Q Consensus 323 ~i~~~~~~--~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~-~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~ 398 (419)
|++.+... ..+..+.+.+....... .+ ++.....++..++..-. +...++..+.+.++++.+.+.|++. |+.+.
T Consensus 254 ~ii~p~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~ 331 (433)
T PRK06855 254 WIEVYNADKDEVFKKYINSILNAKMIE-VC-STTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVPGLKVN 331 (433)
T ss_pred EEEEeCCchhhHHHHHHHHHHHhhccc-cC-CChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCeecc
Confidence 99984210 00002223332221111 11 22222333333443211 1224556677788888899999876 77654
Q ss_pred cCCCcceeEEEEeCC
Q 014724 399 SGGSDNHLVLVDLRP 413 (419)
Q Consensus 399 ~~~t~~hlv~vd~~~ 413 (419)
. ...+.++|+++.+
T Consensus 332 ~-p~gg~~~w~~l~~ 345 (433)
T PRK06855 332 R-TNGAFYMTVVFED 345 (433)
T ss_pred C-CCeeEEEeecccc
Confidence 3 2345779999964
No 92
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.86 E-value=2.3e-19 Score=180.86 Aligned_cols=294 Identities=16% Similarity=0.134 Sum_probs=180.8
Q ss_pred ccChhHHHHHHHHHHHh---hhcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHH
Q 014724 85 EADPEVCEIITKEKERQ---FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALA 159 (419)
Q Consensus 85 ~~~~~~~~~~~~e~~r~---~~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~ 159 (419)
.++|..+..++.-..+. ...|+|..+++. .++.+++++.+.+.......|+. ..| ..+ .++++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~---~~g---~~~----lr~~ia~ 77 (380)
T PRK06225 8 KVPPSGFKTSNEFFDYVFKDKEMIWMGQNTNHLGPHEEVREAMIRCIEEGEYCKYPP---PEG---FPE----LRELILK 77 (380)
T ss_pred ccCcchhhhHHHHHHHHhhcCCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCC---Ccc---hHH----HHHHHHH
Confidence 34455444444332222 456778777763 58999999988875432222322 112 223 3467888
Q ss_pred HcCCCCCCCceeEecC-ChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccC--CCCC
Q 014724 160 AFNLDENKWGVNVQPL-SGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD--ESTG 236 (419)
Q Consensus 160 ~~g~~~~~~~v~V~~~-sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~--~~~~ 236 (419)
++|++++ +|+++ ++++|+..++.+++++||+|++++|.+..+. ..+...|. ++++++++ ++++
T Consensus 78 ~l~~~~~----~v~~~~g~t~al~~~~~~~~~~gd~vl~~~p~y~~~~--------~~~~~~g~--~~~~v~~~~~~~~~ 143 (380)
T PRK06225 78 DLGLDDD----EALITAGATESLYLVMRAFLSPGDNAVTPDPGYLIID--------NFASRFGA--EVIEVPIYSEECNY 143 (380)
T ss_pred hcCCCCC----cEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchH--------HHHHHhCc--eEEeeccccccCCc
Confidence 8998874 34444 5578999999999999999999998765432 12234555 44444442 2246
Q ss_pred CCCHHHHHHHhhhcCCeEEEEcCCCCCCc-----CChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC-CCcEEEe
Q 014724 237 LVDYDMLEKTAILFRPKLIIAGASAYPRD-----FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTT 310 (419)
Q Consensus 237 ~iD~d~Le~~l~~~~pklIi~~~s~~p~~-----~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~-~~Div~~ 310 (419)
.+|++++++.+.+ ++++|++.+|+||+- .++++|.++|+++|+++|+|+++ .++.........++ ...+++.
T Consensus 144 ~~d~~~l~~~~~~-~~~~v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~i~~~ 221 (380)
T PRK06225 144 KLTPELVKENMDE-NTRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTY-RDFAREHTLAAEYAPEHTVTSY 221 (380)
T ss_pred cCCHHHHHhhcCC-CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhH-HHHhccCCchhhcCCCCEEEEe
Confidence 8999999998864 789998888888852 35889999999999999999985 33321110001111 3457888
Q ss_pred CCCCcC--CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHH
Q 014724 311 TTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALAS 388 (419)
Q Consensus 311 S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~ 388 (419)
|++|+| +|.|.|++++++ ++.+.+....... .+ .+....++...++... ....++..+...++++.+.+
T Consensus 222 s~SK~~g~~G~RiG~i~~~~------~l~~~~~~~~~~~-~~-~~~~~~~~a~~~l~~~-~~~~~~~~~~~~~~~~~l~~ 292 (380)
T PRK06225 222 SFSKIFGMAGLRIGAVVATP------DLIEVVKSIVIND-LG-TNVIAQEAAIAGLKVK-DEWIDRIRRTTFKNQKLIKE 292 (380)
T ss_pred echhhcCCccceeEEEecCH------HHHHHHHHHHhcc-cC-CCHHHHHHHHHHHhcc-hHHHHHHHHHHHHHHHHHHH
Confidence 999988 477889999987 5666655432111 12 2222222222234332 12234444556667788888
Q ss_pred HHHhC-CcEEecCCCcceeEEEEeCC
Q 014724 389 RLVEL-GYKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 389 ~L~~~-G~~v~~~~t~~hlv~vd~~~ 413 (419)
.|++. |+.+...+....++|+++.+
T Consensus 293 ~L~~~~~~~~~~~~~~g~~~~~~~~~ 318 (380)
T PRK06225 293 AVDEIEGVFLPVYPSHGNMMVIDISE 318 (380)
T ss_pred HHHhCcCCccccCCCCCeEEEEEccc
Confidence 88873 65332112445678998864
No 93
>PRK07683 aminotransferase A; Validated
Probab=99.86 E-value=2.2e-19 Score=181.62 Aligned_cols=283 Identities=14% Similarity=0.101 Sum_probs=183.0
Q ss_pred hhcccccccCC--CChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCCh-H
Q 014724 102 FKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-S 178 (419)
Q Consensus 102 ~~~i~L~~sen--~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sG-t 178 (419)
...|+|..+.. +.++.+++++.+.+.+.+ .+|+.. .|. .++++.+.+++.+.+|+..+ ...+|++++| +
T Consensus 28 ~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~-~~Y~~~---~g~---~~lr~~ia~~l~~~~g~~~~-~~~~I~~t~G~~ 99 (387)
T PRK07683 28 DNLISLTIGQPDFPTPSHVKEAAKRAITENY-TSYTHN---AGL---LELRKAACNFVKDKYDLHYS-PESEIIVTIGAS 99 (387)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHhcCC-CCCCCC---CCC---HHHHHHHHHHHHHHhCCCCC-CCCcEEEeCChH
Confidence 34577776653 246788899888775432 234321 232 36776677777666676421 1113556665 6
Q ss_pred HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEc
Q 014724 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG 258 (419)
Q Consensus 179 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~ 258 (419)
+|+.+++.+++++||+|++++|.+.++.. .+...|. ++++++.+++++.+|.+++++.+.+ ++|+|++.
T Consensus 100 ~al~~~~~~l~~~gd~Vl~~~p~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~i~i~ 168 (387)
T PRK07683 100 EAIDIAFRTILEPGTEVILPAPIYPGYEP--------IIRLCGA--KPVFIDTRSTGFRLTAEALENAITE-KTRCVVLP 168 (387)
T ss_pred HHHHHHHHHhCCCCCEEEEcCCCccchHH--------HHHHcCC--EEEEeecCcccCCCCHHHHHHhcCc-CceEEEEe
Confidence 79999999999999999999997765431 1234455 5556666555677899999998864 78999999
Q ss_pred CCCCCCc-----CChHHHHHHHHHhCCEEEEeccccccccccCCcCCC--C-C--CCcEEEeCCCCcC--CCCCeeEEEE
Q 014724 259 ASAYPRD-----FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADP--F-K--YCDVVTTTTHKSL--RGPRGGMIFF 326 (419)
Q Consensus 259 ~s~~p~~-----~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~--~-~--~~Div~~S~hK~l--~GprgG~i~~ 326 (419)
+|+||+- .++++|.++|+++|++||+|+++. .+.+.+...+. + + .-.++++|++|.| +|.|.||+++
T Consensus 169 ~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~ 247 (387)
T PRK07683 169 YPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYS-ELVYEQPHTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFA 247 (387)
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccc-cceeCCCcCChhhccCCcCCeEEEeeccccccCccceeEEEEc
Confidence 9999862 347889999999999999999954 44443321111 1 1 2348899999987 7889999998
Q ss_pred eCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCccee
Q 014724 327 KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHL 406 (419)
Q Consensus 327 ~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hl 406 (419)
++ ++.+++.........+.+... ..++...+..- ....++.++++.++++.+.+.|.+.|+.+..+ ..+++
T Consensus 248 ~~------~l~~~~~~~~~~~~~~~~~~~-q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~ 318 (387)
T PRK07683 248 PS------YLAKHILKVHQYNVTCASSIS-QYAALEALTAG-KDDAKMMRHQYKKRRDYVYNRLISMGLDVEKP-TGAFY 318 (387)
T ss_pred CH------HHHHHHHHHHHhccCCCChHH-HHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHHcCCcccCC-CeeEE
Confidence 87 566655432211111112222 22222233321 12345666777888999999999888876543 34566
Q ss_pred EEEEeCC
Q 014724 407 VLVDLRP 413 (419)
Q Consensus 407 v~vd~~~ 413 (419)
+|+.+.+
T Consensus 319 ~~~~~~~ 325 (387)
T PRK07683 319 LFPSIGH 325 (387)
T ss_pred EEEeccc
Confidence 7877654
No 94
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.86 E-value=2.2e-19 Score=179.03 Aligned_cols=269 Identities=12% Similarity=0.067 Sum_probs=177.0
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChH-HHHHHHHHHccCCC
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPH 192 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt-~A~~~~~~all~pG 192 (419)
.++.+.+++.+.... ...|+. ..|. .++++.+.+++.+.+|++.+ .+.+|++++|+ +|+..++.+++++|
T Consensus 14 ~~~~~~~~~~~~~~~--~~~Y~~---~~G~---~~lr~aia~~~~~~~g~~~~-~~~~Iiit~Gs~~ai~~~~~~~~~~g 84 (350)
T TIGR03537 14 TPPFIRKALIDAVPE--VSQYPS---ALGT---KALREAISGWFERRFGVKLD-PDAQVLPSAGSKEAIFHFPLVFIDPE 84 (350)
T ss_pred CCHHHHHHHHHHHhc--cCCCCC---CCCC---HHHHHHHHHHHHHHhCCCCC-CCCcEEEcCChHHHHHHHHHHHcCCC
Confidence 478888888776432 223432 1232 36776777788777786532 11147778875 69999999999988
Q ss_pred ---CEEEEeCCCCCccccCccccccccccccccccEEEecccCC-CCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cC
Q 014724 193 ---DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKLIIAGASAYPR--DF 266 (419)
Q Consensus 193 ---D~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~-~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~ 266 (419)
|+|++++|.|..+.. .+...|. +++++++++ +++.+|++++++++.+ ++|+|++++|+||+ ..
T Consensus 85 ~~~d~Vl~~~p~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~~~~-~~~~i~i~~p~NPtG~~~ 153 (350)
T TIGR03537 85 EDRRRVIFGTPGYPVYER--------GALFAGG--EPTAVKLKKEDGFLLRLEKVEKSILE-ETKIVWINYPHNPTGATA 153 (350)
T ss_pred CCCceEEEcCCCCcchHH--------HHHhcCC--EEEEcccCcccCCccCHHHHHHhhhh-ccEEEEEeCCCCCcCccc
Confidence 699999998766542 2345565 555555553 3457999999998865 79999999999995 34
Q ss_pred C---hHHHHHHHHHhCCEEEEeccccccccccCCcCCCC--C-CCcEEEeCCCCcC--CCCCeeEEEEeCCCcchhhHHH
Q 014724 267 D---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF--K-YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELES 338 (419)
Q Consensus 267 d---l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~--~-~~Div~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~ 338 (419)
+ +++|.++|+++|+++|+|+++. .+...+...+.. + ...+++.|+||++ +|.|.|+++.++ ++.+
T Consensus 154 ~~~~~~~l~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~GlRiG~~~~~~------~~~~ 226 (350)
T TIGR03537 154 PRSYLKETIAMCREHGIILCSDECYT-EIYFGEPPHSALEVGIENVLAFHSLSKRSGMTGYRSGFVAGDE------KLIS 226 (350)
T ss_pred CHHHHHHHHHHHHHcCcEEEEecccc-ccccCCCCCchhhcCcCCEEEEeecccccCCccccceeeecCH------HHHH
Confidence 5 7889999999999999999964 333222111111 1 1237889999986 688999998766 5666
Q ss_pred HhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeEEEEeCC
Q 014724 339 AINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 339 ~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~vd~~~ 413 (419)
.+.........+.+.... .++..++.. ....++.++++.++++.+.+.|++.|+++... ..+.++|+++..
T Consensus 227 ~~~~~~~~~~~~~~~~~q-~~~~~~l~~--~~~~~~~r~~l~~~~~~~~~~l~~~g~~~~~~-~g~~~~~~~~~~ 297 (350)
T TIGR03537 227 FLRKLRANFGVASPDFVQ-AAAKAAWSD--DNHVLERRKIFKRKRDLFIEFFNKVGLEYLYP-DATFYLWVKVPS 297 (350)
T ss_pred HHHHHHHhhccCCCHHHH-HHHHHHhCC--cHHHHHHHHHHHHHHHHHHHHHHHCCCcccCC-CeEEEEEEECCC
Confidence 665433222222322222 222223321 22345667778888899999999999876643 346678998864
No 95
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.86 E-value=2.4e-19 Score=181.72 Aligned_cols=279 Identities=13% Similarity=0.099 Sum_probs=180.6
Q ss_pred hhcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCC-CCCCceeEecCCh-
Q 014724 102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSG- 177 (419)
Q Consensus 102 ~~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~-~~~~~v~V~~~sG- 177 (419)
.+.|+|..+++. +++.+++++.+.+... ..|+. ..|. .++.+.+.+++.+.+|.+ .+.. .+|++++|
T Consensus 29 ~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~--~~Y~~---~~G~---~~lr~~ia~~~~~~~g~~~~~~~-~~i~it~G~ 99 (396)
T PRK09147 29 LPPISLSIGEPKHPTPAFIKDALAANLDGL--ASYPT---TAGL---PALREAIAAWLERRYGLPALDPA-TQVLPVNGS 99 (396)
T ss_pred CCeEecCCCCCCCCCCHHHHHHHHHHhhhh--cCCCC---CCCC---HHHHHHHHHHHHHHhCCCcCCcc-ceEEECCCh
Confidence 466888777743 5788888887765321 23433 1232 256666777887777855 2210 14667777
Q ss_pred HHHHHHHHHHccCC---CCEEEEeCCCCCccccCccccccccccccccccEEEecccCCC-CCCCCHHHHHHHhhhcCCe
Q 014724 178 SPANFEVYTAILKP---HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPK 253 (419)
Q Consensus 178 t~A~~~~~~all~p---GD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~-~~~iD~d~Le~~l~~~~pk 253 (419)
++|+..++.++++| ||.|++++|.+..+.. .+...|. ++++++++++ ++.+|++++++.+.+ ++|
T Consensus 100 ~~al~~~~~~l~~~~~~gd~vlv~~P~y~~~~~--------~~~~~g~--~~~~vp~~~~~~~~~d~~~l~~~~~~-~~k 168 (396)
T PRK09147 100 REALFAFAQTVIDRDGPGPLVVCPNPFYQIYEG--------AALLAGA--EPYFLNCDPANNFAPDFDAVPAEVWA-RTQ 168 (396)
T ss_pred HHHHHHHHHHHcCCCCCCCEEEEcCCCccchHH--------HHHhcCC--EEEEeccCccccCccCHHHHHHHHhh-ccE
Confidence 56999999999999 9999999998765431 1234565 4555555543 468999999987754 799
Q ss_pred EEEEcCCCCCC--cC---ChHHHHHHHHHhCCEEEEeccccccccccCCcC--CCC----C-C---Cc--EEEeCCCCc-
Q 014724 254 LIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPF----K-Y---CD--VVTTTTHKS- 315 (419)
Q Consensus 254 lIi~~~s~~p~--~~---dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~--~~~----~-~---~D--iv~~S~hK~- 315 (419)
+|++++|+||+ .. ++++|.++|++|+++||+|+++ ..+.+.+..+ ..+ . + .+ +++.|++|.
T Consensus 169 ~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~ 247 (396)
T PRK09147 169 LLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECY-SEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRS 247 (396)
T ss_pred EEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccc-cccccCCCCCCchhhhhccccCccccccEEEEecccccc
Confidence 99999999995 22 5788899999999999999995 4444433211 111 0 1 12 889999996
Q ss_pred -CCCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCC
Q 014724 316 -LRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG 394 (419)
Q Consensus 316 -l~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G 394 (419)
++|.|.||+++++ ++.+.+.........+.+.. ...+...++.. ...+++.++++.++++.+.+.|++.
T Consensus 248 ~~~GlRiG~~~~~~------~l~~~~~~~~~~~~~~~~~~-~q~a~~~~~~~--~~~~~~~~~~~~~~~~~~~~~L~~~- 317 (396)
T PRK09147 248 NVPGLRSGFVAGDA------ALLKKFLLYRTYHGCAMPPA-VQAASIAAWND--EAHVRENRALYREKFDAVTPILAPV- 317 (396)
T ss_pred CCccceeeeecCCH------HHHHHHHHHhhhcccCCCHH-HHHHHHHHhcc--hhHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 4889999999887 56666554321111111112 22222223321 1234666777888888898998874
Q ss_pred cEEecCCCcceeEEEEeC
Q 014724 395 YKLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 395 ~~v~~~~t~~hlv~vd~~ 412 (419)
+.+.. .....++|+++.
T Consensus 318 ~~~~~-p~~g~f~~~~~~ 334 (396)
T PRK09147 318 LDVQL-PDAGFYLWAKVP 334 (396)
T ss_pred cCCCC-CCeeEEEEEECC
Confidence 54432 245678999985
No 96
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.85 E-value=3.1e-20 Score=186.85 Aligned_cols=248 Identities=19% Similarity=0.254 Sum_probs=171.8
Q ss_pred CCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccc
Q 014724 140 YGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSG 219 (419)
Q Consensus 140 ~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~ 219 (419)
|.|.+...+|| +.+++++|.+. .|.++||+.|++++....++|||.| +.+.+ +... ...+..
T Consensus 67 yag~~s~~~lE----~~va~~~G~~~-----av~v~sGT~Al~ll~~l~l~pGDeV--psn~~---f~Tt----~ahIe~ 128 (450)
T TIGR02618 67 YAGSRNFYHLE----RTVRELYGFKY-----VVPTHQGRGAENLLSQIAIKPGDYV--PGNMY---FTTT----RYHQEK 128 (450)
T ss_pred hcCCCcHHHHH----HHHHHHHCCCe-----EEEcCCHHHHHHHHHHhCCCCcCEE--CCcee---HHHH----HHHHHh
Confidence 44555566788 56788999987 2778899999887777779999987 43333 1110 001234
Q ss_pred cccccEEEecccC---------CCCCCCCHHHHHHHhhhcC---CeEEEEcCCCC---CCc---CChHHHHHHHHHhCCE
Q 014724 220 TSIYFESMPYRLD---------ESTGLVDYDMLEKTAILFR---PKLIIAGASAY---PRD---FDYPRMRQIADAVGAL 281 (419)
Q Consensus 220 ~g~~~~~v~~~~~---------~~~~~iD~d~Le~~l~~~~---pklIi~~~s~~---p~~---~dl~~I~~ia~~~ga~ 281 (419)
.|. .++.+..+ +.++.+|+++|++.+++.. .++|.+..++| +.. .++++|.++|++||+.
T Consensus 129 ~Ga--v~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~ 206 (450)
T TIGR02618 129 NGA--TFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIK 206 (450)
T ss_pred CCe--EEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCE
Confidence 454 23332112 3468999999999997532 23444433333 333 4689999999999999
Q ss_pred EEEeccccccccc------cCCcCCC--------CCCCcEEEeCCCCcCCCCCeeEEEEeCCCcchhhHHHHhhhc--cc
Q 014724 282 LMMDMAHISGLVA------ASVVADP--------FKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNA--VF 345 (419)
Q Consensus 282 livD~ah~~Gl~~------~g~~~~~--------~~~~Div~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i~~~--~~ 345 (419)
||.|+||.+|-.. .+....+ +.++|.+++|++|.+.+|-||+|+++++ ++.++++.. .+
T Consensus 207 vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~~GG~l~~~d~-----~l~~k~r~~~~~~ 281 (450)
T TIGR02618 207 VFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVNIGGFLCMNDD-----EMFQSAKELVVVF 281 (450)
T ss_pred EEEEccchhhChhhhhcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCCCceEEEeCCH-----HHHHHHHHHhhhc
Confidence 9999999885311 1111222 2389999999999999999999998886 787777654 33
Q ss_pred CCC--CCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeEEEEeCCccc
Q 014724 346 PGL--QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPMVT 416 (419)
Q Consensus 346 ~~~--~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~vd~~~~~~ 416 (419)
.++ .|+-....+.|++++|.+..+ ..|.++...++++|.+.|.+.|++++. .+.+|.|+||+..++.
T Consensus 282 eG~~tyGgla~r~~~ala~gL~e~~~---~~y~~~r~~~a~~La~~L~~~Gvpv~~-p~ggh~V~vda~~~lp 350 (450)
T TIGR02618 282 EGMPSYGGLAGRDMEAMAIGIREAVD---YEYIEHRVKQVRYLGDKLKAAGVPIVE-PVGGHAVFLDARRFLP 350 (450)
T ss_pred CCccccCchhhhhHHHHHHHHHHhhh---HHHHHHHHHHHHHHHHHHHHCCCcccC-CCCcceEEEEhHHhCC
Confidence 332 223233457778888888763 367777788899999999999999864 4678999999987654
No 97
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.85 E-value=1.4e-19 Score=181.39 Aligned_cols=245 Identities=17% Similarity=0.139 Sum_probs=162.2
Q ss_pred cCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHcc
Q 014724 110 SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL 189 (419)
Q Consensus 110 sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all 189 (419)
+-+++|++|++++.+...+ |. + .+++.+++++++++++|.+. + +++.+||.|+++++.+++
T Consensus 21 g~s~~~~~v~~a~~~~~~~-~~----------~---~~~~~~~~~~~~a~~~g~~~----~-~~~~g~t~al~~al~al~ 81 (363)
T TIGR01437 21 GVSTVSDEVADAQKRGAQN-YF----------E---IKELVNKTGEYIANLLGVED----A-VIVSSASAGIAQSVAAVI 81 (363)
T ss_pred CCCCCCHHHHHHHHHHHhc-CC----------C---HHHHHHHHHHHHHHhhCCCe----E-EEEcCHHHHHHHHHHHHh
Confidence 3456799999999887643 21 1 12344456788999999864 3 667778899999999999
Q ss_pred CCCC---------------EEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeE
Q 014724 190 KPHD---------------RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKL 254 (419)
Q Consensus 190 ~pGD---------------~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pkl 254 (419)
++|| +|+++.|-+ ..+...+ ...+.+.|. +++.++. ++.+|++++++++.+ ++|+
T Consensus 82 ~~Gd~~~~~~~~~s~~~~~eVi~~~~~~-~~~~~~~---~~~~~~~g~--~~v~v~~---~~~~d~~~le~ai~~-~t~a 151 (363)
T TIGR01437 82 TRGNRYLVENLHDSKIEVNEVVLPKGHN-VDYGAPV---ETMVRLGGG--KVVEAGY---ANECSAEQLEAAITE-KTAA 151 (363)
T ss_pred cCCCcchhhcccccccccceEEEECccc-hhcCCch---HHHHHhcCC--eEEEEcC---CCCCCHHHHHHhcCh-hceE
Confidence 9998 777765322 1110000 012234554 4455443 356999999999975 7887
Q ss_pred EE-EcCCCCC--CcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC-CCcEEEeCCCCcCCCCCeeEEEEeCCC
Q 014724 255 II-AGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLRGPRGGMIFFKKDP 330 (419)
Q Consensus 255 Ii-~~~s~~p--~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~-~~Div~~S~hK~l~GprgG~i~~~~~~ 330 (419)
|+ ++.++++ ...|+++|.++|++||+++++|++|...+ ..... ++|++++|+||+|+||++|+++.++
T Consensus 152 i~~v~~~~~~~g~~~~~~~i~~~a~~~gi~vivD~a~~~~~------~~~~~~g~D~~~~S~~K~l~gp~~G~l~~~~-- 223 (363)
T TIGR01437 152 ILYIKSHHCVQKSMLSVEDAAQVAQEHNLPLIVDAAAEEDL------QKYYRLGADLVIYSGAKAIEGPTSGLVLGKK-- 223 (363)
T ss_pred EEEEecCCCCcCCcCCHHHHHHHHHHcCCeEEEECCCCCch------HHHHHcCCCEEEEeCCcccCCCceEEEEEcH--
Confidence 65 4554444 46799999999999999999999985221 11112 6899999999999999999988765
Q ss_pred cchhhHHHHhhhcccC---CCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEEe
Q 014724 331 VLGVELESAINNAVFP---GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLV 398 (419)
Q Consensus 331 ~~~~~l~~~i~~~~~~---~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~ 398 (419)
++.+.+...... ..+.+. ..++++..++..+... ..+..++..++++++.+.|.+. |+++.
T Consensus 224 ----~~i~~~~~~~~~~~~~~~~~~--~~~~gl~aAl~~~~~~-~~~~~~~~~~~~~~l~~~L~~i~g~~~~ 288 (363)
T TIGR01437 224 ----KYIEWVKLQSKGIGRAMKVGK--ENILGLTAALEQYLST-GKESGAEMVAKLTPFIEALNTLKGVSAS 288 (363)
T ss_pred ----HHHHHHHhccCCCcceeccCH--HHHHHHHHHHHHHHcc-CcccHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 454444321111 111111 2256677777766532 2333444556677899999986 88876
No 98
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.85 E-value=1.7e-19 Score=183.41 Aligned_cols=269 Identities=21% Similarity=0.251 Sum_probs=176.5
Q ss_pred ccccCCCC----hHHHHHHHhhhhhccCCCCCCCCCCCCc-hhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHH
Q 014724 107 LIASENFT----SRAVMEAVGSCLTNKYSEGLPGKRYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPAN 181 (419)
Q Consensus 107 L~~sen~~----~~~V~eal~~~l~~~y~~g~p~~r~~~g-~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~ 181 (419)
..+|.||+ +|.|++++.+.+. +|..+..+++.+.| .+...++| +.+++++|.+. .++++||++||
T Consensus 50 ~~~s~dylgl~~~p~v~~a~~~~~~-~~~~~~~~s~~~~g~~~~~~~l~----~~la~~~g~~~-----~~~~~sG~~an 119 (407)
T PRK09064 50 VWCSNDYLGMGQHPKVIEAMIEALD-RCGAGAGGTRNISGTNHYHVELE----RELADLHGKEA-----ALVFTSGYVSN 119 (407)
T ss_pred EEECCCCcCCCCCHHHHHHHHHHHH-HcCCCCCCcCcCccCHHHHHHHH----HHHHHHhCCCc-----EEEECcHHHHH
Confidence 45677775 7999999988875 45445445554433 34345555 67788888543 47889999999
Q ss_pred HHHHHHccC--CCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhh---cCCeEEE
Q 014724 182 FEVYTAILK--PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---FRPKLII 256 (419)
Q Consensus 182 ~~~~~all~--pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~---~~pklIi 256 (419)
..++..+.. +++.|+.....|++... .+...+. +...++ ..|+++++++++. .++++|+
T Consensus 120 ~~ai~~l~~~~~~~~i~~~~~~h~s~~~--------~~~~~~~--~~~~~~------~~d~~~le~~l~~~~~~~~~~v~ 183 (407)
T PRK09064 120 DATLSTLAKLIPDCVIFSDELNHASMIE--------GIRRSRC--EKHIFR------HNDVAHLEELLAAADPDRPKLIA 183 (407)
T ss_pred HHHHHHHhCCCCCCEEEEeCcchHHHHH--------HHHHcCC--cEEEEC------CCCHHHHHHHHHhccCCCCeEEE
Confidence 988887754 78877776655544321 1223333 222332 2478888888763 3578999
Q ss_pred EcCCCCC--CcCChHHHHHHHHHhCCEEEEecccccccccc-CC-cC--CCC-CCCcEEEeCCCCcCCCCCeeEEEEeCC
Q 014724 257 AGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAA-SV-VA--DPF-KYCDVVTTTTHKSLRGPRGGMIFFKKD 329 (419)
Q Consensus 257 ~~~s~~p--~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~-g~-~~--~~~-~~~Div~~S~hK~l~GprgG~i~~~~~ 329 (419)
++++.++ ...|+++|.++|++||++|++|++|..|..+. |. .. ..+ +..|++++|++|+| |+.||++++++
T Consensus 184 ~~~v~s~~G~~~~l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~-g~~GG~~~~~~- 261 (407)
T PRK09064 184 FESVYSMDGDIAPIAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAF-GVMGGYIAGSA- 261 (407)
T ss_pred EeCCCCCCccccCHHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhh-hccCceEecCH-
Confidence 9887665 45789999999999999999999998775432 11 11 111 24689999999998 56789998876
Q ss_pred CcchhhHHHHhhhcccCCC-CCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeEE
Q 014724 330 PVLGVELESAINNAVFPGL-QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVL 408 (419)
Q Consensus 330 ~~~~~~l~~~i~~~~~~~~-~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~ 408 (419)
++.+.+.....+.. .++.+....++...+++.+... ....+++.+++++|.+.|++.|++++. +.+++++
T Consensus 262 -----~~~~~l~~~~~~~~~t~~~~~~~~~aa~~al~~~~~~--~~~~~~~~~~~~~l~~~L~~~g~~~~~--~~~~iv~ 332 (407)
T PRK09064 262 -----ALVDAVRSYAPGFIFTTSLPPAIAAAALASIRHLKES--NEERERHQERAAKLKAALDAAGIPVMP--NESHIVP 332 (407)
T ss_pred -----HHHHHHHHhCccccccCcCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHcCCCCCC--CCCCEEE
Confidence 56665543222221 1222233333434466655422 344677889999999999999998764 3467777
Q ss_pred EEeC
Q 014724 409 VDLR 412 (419)
Q Consensus 409 vd~~ 412 (419)
+.+.
T Consensus 333 i~~~ 336 (407)
T PRK09064 333 VMVG 336 (407)
T ss_pred EEeC
Confidence 7663
No 99
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.85 E-value=1.7e-19 Score=180.01 Aligned_cols=267 Identities=15% Similarity=0.136 Sum_probs=179.2
Q ss_pred cccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChH-HH
Q 014724 104 SLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PA 180 (419)
Q Consensus 104 ~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt-~A 180 (419)
.+.|..+++. +|+.+++++.+.+......+|+. ....++ ++.++++++++++ +|++++|+ ++
T Consensus 24 ~~~l~~~~~~~~~p~~~~~a~~~~~~~~~~~~y~~-------~~~~~l----r~~ia~~~~~~~~----~i~it~G~~~~ 88 (351)
T PRK14807 24 KYKMDANETPFELPEEVIKNIQEIVKSSQVNIYPD-------PTAEKL----REELARYCSVVPT----NIFVGNGSDEI 88 (351)
T ss_pred eeEccCCCCCCCCCHHHHHHHHHHhhcCcccCCCC-------ccHHHH----HHHHHHHhCCCcc----cEEEecCHHHH
Confidence 4667777754 68999999887664322223332 112234 4567778888764 46677775 58
Q ss_pred HHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCC
Q 014724 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS 260 (419)
Q Consensus 181 ~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s 260 (419)
+..++.++++|||+|++.+|.+..+.. .+...|. +.++++.+ +++.+|++++++.++..++|+|++++|
T Consensus 89 l~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~~~~~~~k~v~l~~p 157 (351)
T PRK14807 89 IHLIMLAFINKGDVVIYPHPSFAMYSV--------YSKIAGA--VEIPVKLK-EDYTYDVGSFIKVIEKYQPKLVFLCNP 157 (351)
T ss_pred HHHHHHHhcCCCCEEEEeCCChHHHHH--------HHHHcCC--eEEEeecC-CCCCCCHHHHHHHhhccCCCEEEEeCC
Confidence 899999999999999999988764421 1234454 45555555 357899999999987668999999999
Q ss_pred CCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcC--CCCCeeEEEEeCCCcchh
Q 014724 261 AYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGV 334 (419)
Q Consensus 261 ~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l--~GprgG~i~~~~~~~~~~ 334 (419)
+||+ ..+.+++.++|++++.++|+|++| .++. .......++ ...++++|++|++ +|.|.||+++++
T Consensus 158 ~NPtG~~~~~~~l~~l~~~~~~~~ivDe~y-~~~~-~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~~------ 229 (351)
T PRK14807 158 NNPTGSVIEREDIIKIIEKSRGIVVVDEAY-FEFY-GNTIVDVINEFENLIVLRTLSKAFGLAGLRVGYAVANE------ 229 (351)
T ss_pred CCCCCCCCCHHHHHHHHHhCCCEEEEeCcc-hhhc-ccchHHHhhhCCCEEEEecchHhcccchhceeeeecCH------
Confidence 9985 578899999999989999999996 3432 211111122 2248899999987 788999999876
Q ss_pred hHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEEecCCCcceeEEEEeC
Q 014724 335 ELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 335 ~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~~~~t~~hlv~vd~~ 412 (419)
++.+.+.....+.. .+... ..++..+++. ..+++..+++.++++.+.+.|++. |+++.+. +..++|+++.
T Consensus 230 ~~~~~~~~~~~~~~--~~~~~-q~~~~~~l~~---~~~~~~~~~~~~~r~~l~~~l~~~~g~~~~~~--~~~~~~i~~~ 300 (351)
T PRK14807 230 NILKYLNLVKSPYN--INSLS-QVIALKVLRT---GVLKERVNYILNERERLIKELSKIPGIKVYPS--KTNFILVKFK 300 (351)
T ss_pred HHHHHHHHccCCCC--cCHHH-HHHHHHHHhH---HHHHHHHHHHHHHHHHHHHHHHhCCCcEECcC--CccEEEEEcC
Confidence 67676654332221 11222 2222223332 245666777788888899999875 8876543 3456888874
No 100
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.85 E-value=3.5e-20 Score=182.74 Aligned_cols=203 Identities=19% Similarity=0.224 Sum_probs=155.7
Q ss_pred hccccccc-CCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCC-hHHH
Q 014724 103 KSLELIAS-ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLS-GSPA 180 (419)
Q Consensus 103 ~~i~L~~s-en~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~s-Gt~A 180 (419)
+.+.|..+ ..++++.|++|+..++.+.| |+|.+++ .|.+..+.+| .+|+.+++++|+++.+ |++++ +|++
T Consensus 43 ~~vyld~~at~p~~~~Vldam~~~~~~~~--~nPh~~~-y~w~~~~~~E-~aR~~VAklInAd~~d----IiFts~ATEs 114 (428)
T KOG1549|consen 43 RPVYLDNQATGPMDPRVLDAMLPYLLEYL--GNPHSRS-YGWKAEDAVE-AAREQVAKLINADPSD----IVFTSGATES 114 (428)
T ss_pred ccEEEecCcCCCCCHHHHHHHHHHHHHhh--cCCCccc-cchhhhHHHH-HHHHHHHHHhCCCCCc----EEEeCCchHH
Confidence 34555443 35789999999999987655 7888773 3455556677 6899999999999963 45555 5889
Q ss_pred HHHHHHHc-cCCCC----EEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEE
Q 014724 181 NFEVYTAI-LKPHD----RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLI 255 (419)
Q Consensus 181 ~~~~~~al-l~pGD----~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklI 255 (419)
|++++..+ +.++| +|+.++-+|.++.-.. ....-.| +++..++++ +++.+|.+.+++.+++ +|++|
T Consensus 115 ~Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~-----~~l~~~g--~~Vt~lpv~-~~~~~d~~~~~~~i~~-~T~lv 185 (428)
T KOG1549|consen 115 NNLVLKGVARFFGDKTKKHIITLQTEHPCVLDSC-----RALQEEG--LEVTYLPVE-DSGLVDISKLREAIRS-KTRLV 185 (428)
T ss_pred HHHHHHHhhccccccccceEEEecccCcchhHHH-----HHHHhcC--eEEEEeccC-ccccccHHHHHHhcCC-CceEE
Confidence 99999888 55777 9999998888765211 1223345 455556665 5789999999999986 89999
Q ss_pred EEcCCCC--CCcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcCCCCC-eeEEEEeC
Q 014724 256 IAGASAY--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPR-GGMIFFKK 328 (419)
Q Consensus 256 i~~~s~~--p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l~Gpr-gG~i~~~~ 328 (419)
.+...+| +..+|+++|.++|++.|+++++|+||..|.+ +.++. ++|+++.+.||+| ||+ .|++++++
T Consensus 186 ~I~~Vnn~~gv~~Pv~EI~~icr~~~v~v~~DaAQavG~i-----~vDV~eln~D~~s~s~HK~y-gp~~iGaLYvr~ 257 (428)
T KOG1549|consen 186 SIMHVNNEIGVLQPVKEIVKICREEGVQVHVDAAQAVGKI-----PVDVQELNADFLSISAHKIY-GPPGIGALYVRR 257 (428)
T ss_pred EEEecccCccccccHHHHHHHhCcCCcEEEeehhhhcCCc-----cccHHHcCchheeeeccccc-CCCcceEEEEcc
Confidence 8876544 3678999999999999999999999998865 22233 7999999999987 666 59999986
No 101
>PRK14012 cysteine desulfurase; Provisional
Probab=99.85 E-value=1e-19 Score=185.02 Aligned_cols=262 Identities=17% Similarity=0.221 Sum_probs=175.0
Q ss_pred ccCCCChHHHHHHHhhhhh--ccCCCCCCCCCCC-CchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHH
Q 014724 109 ASENFTSRAVMEAVGSCLT--NKYSEGLPGKRYY-GGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVY 185 (419)
Q Consensus 109 ~sen~~~~~V~eal~~~l~--~~y~~g~p~~r~~-~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~ 185 (419)
++..++++.|++++...+. +.+ +.++.+.. .+......++ .+++++++++|+++++ .+++++||+|++.++
T Consensus 10 a~~~~~~~~v~~a~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~r~~ia~~~g~~~~~---v~~~~g~t~al~~~l 83 (404)
T PRK14012 10 SATTPVDPRVAEKMMPYLTMDGTF--GNPASRSHRFGWQAEEAVD-IARNQIADLIGADPRE---IVFTSGATESDNLAI 83 (404)
T ss_pred cCCCCCCHHHHHHHHHHHHhcccC--cCCCchhhHHHHHHHHHHH-HHHHHHHHHcCcCcCe---EEEeCCHHHHHHHHH
Confidence 3456789999999988875 334 33332111 1111112333 4568899999998742 245566788998887
Q ss_pred HHc----cCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCC
Q 014724 186 TAI----LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 261 (419)
Q Consensus 186 ~al----l~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~ 261 (419)
.++ .++||+|++.+++|.+....+ ..+...|. +++.++.+ .++.+|+++|++.+++ ++++|++.+++
T Consensus 84 ~~l~~~~~~~gd~Vi~~~~~~~s~~~~~-----~~~~~~g~--~~~~v~~~-~~g~~d~~~l~~~i~~-~t~lv~~~~~~ 154 (404)
T PRK14012 84 KGAAHFYQKKGKHIITSKTEHKAVLDTC-----RQLEREGF--EVTYLDPQ-SNGIIDLEKLEAAMRD-DTILVSIMHVN 154 (404)
T ss_pred HHHHHhhcCCCCEEEEecCccHHHHHHH-----HHHHhCCC--EEEEEccC-CCCcCCHHHHHHhcCC-CCEEEEEECcC
Confidence 766 479999999988876654221 11122354 44444455 4688999999999975 78999888777
Q ss_pred CC--CcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcCCCCCe-eEEEEeCCCcchhhH
Q 014724 262 YP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVEL 336 (419)
Q Consensus 262 ~p--~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l~Gprg-G~i~~~~~~~~~~~l 336 (419)
|+ ...|+++|.++|+++|+++++|++|+.|.. +.++. ++|++++|+||.+ ||.| |+++.+++. .
T Consensus 155 n~tG~~~~~~~I~~la~~~g~~vivD~a~~~g~~-----~~~~~~~~~D~~~~s~~K~~-gp~g~G~l~~~~~~-----~ 223 (404)
T PRK14012 155 NEIGVIQDIAAIGEICRERGIIFHVDAAQSVGKV-----PIDLSKLKVDLMSFSAHKIY-GPKGIGALYVRRKP-----R 223 (404)
T ss_pred CCccchhhHHHHHHHHHHcCCEEEEEcchhcCCc-----ccCcccCCCCEEEEehhhcc-CCCceEEEEEecCC-----C
Confidence 65 467999999999999999999999987643 11222 6899999999955 6766 888777641 1
Q ss_pred HHHhhhccc------CCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEEe
Q 014724 337 ESAINNAVF------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLV 398 (419)
Q Consensus 337 ~~~i~~~~~------~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~ 398 (419)
.++..... ....|++....+.++..++..+. .+.+...++..++++++.+.|++. ++.+.
T Consensus 224 -~~~~~~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~-~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~ 290 (404)
T PRK14012 224 -VRLEAQMHGGGHERGMRSGTLPTHQIVGMGEAARIAK-EEMATENERIRALRDRLWNGIKDIEEVYLN 290 (404)
T ss_pred -CCCCceecCCCccCCccCCCcCHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHhcCCCEEEe
Confidence 11111000 01134566666777777776654 345667788888999999999875 56654
No 102
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.85 E-value=9e-20 Score=185.75 Aligned_cols=267 Identities=20% Similarity=0.207 Sum_probs=176.0
Q ss_pred cccCCCC----hHHHHHHHhhhhhccCCCCCCCCCCCCchh-HHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHH
Q 014724 108 IASENFT----SRAVMEAVGSCLTNKYSEGLPGKRYYGGNE-YIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF 182 (419)
Q Consensus 108 ~~sen~~----~~~V~eal~~~l~~~y~~g~p~~r~~~g~~-~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~ 182 (419)
..+++|+ +|.|++++.+.+. +|..+..+++.+.|.. ...++| +++++++|.+. .++++||+.||.
T Consensus 51 ~~sn~yl~l~~~p~v~~a~~~~~~-~~~~~~~~s~~~~~~~~~~~~Le----~~la~~~g~~~-----~i~~~sG~~a~~ 120 (410)
T PRK13392 51 WCSNDYLGMGQHPDVIGAMVDALD-RYGAGAGGTRNISGTSHPHVLLE----RELADLHGKES-----ALLFTSGYVSND 120 (410)
T ss_pred EECCCccCCCCCHHHHHHHHHHHH-HcCCCCchhhhcccChHHHHHHH----HHHHHHhCCCC-----EEEECcHHHHHH
Confidence 3456663 7999999988774 4554444554444432 334555 67889999643 488899999999
Q ss_pred HHHHHcc--CCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhh---cCCeEEEE
Q 014724 183 EVYTAIL--KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---FRPKLIIA 257 (419)
Q Consensus 183 ~~~~all--~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~---~~pklIi~ 257 (419)
.++.++. .|||.|++....|++.+. .+...|..+. .++. .|.+.+++.++. .++++|++
T Consensus 121 ~~i~~l~~~~~g~~vi~~~~~h~s~~~--------~~~~~g~~~~--~~~~------~d~~~l~~~l~~~~~~~t~~v~i 184 (410)
T PRK13392 121 AALSTLGKLLPGCVILSDALNHASMIE--------GIRRSGAEKQ--VFRH------NDLADLEEQLASVDPDRPKLIAF 184 (410)
T ss_pred HHHHHHhcCCCCCEEEEehhhhHHHHH--------HHHHcCCeEE--EEeC------CCHHHHHHHHHhccCCCCEEEEE
Confidence 8888775 489988887766655431 1234454332 2221 255666665542 36889999
Q ss_pred cCCCCCC--cCChHHHHHHHHHhCCEEEEecccccccccc---CCc--CCCCCCCcEEEeCCCCcCCCCCeeEEEEeCCC
Q 014724 258 GASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAA---SVV--ADPFKYCDVVTTTTHKSLRGPRGGMIFFKKDP 330 (419)
Q Consensus 258 ~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~---g~~--~~~~~~~Div~~S~hK~l~GprgG~i~~~~~~ 330 (419)
++++||+ ..|+++|.++|+++|+++++|++|..|..+. +.. ....+..|++++|++|+|++ .|||+++++
T Consensus 185 ~~~~n~tG~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~-~GG~~~~~~-- 261 (410)
T PRK13392 185 ESVYSMDGDIAPIEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGC-LGGYIAASA-- 261 (410)
T ss_pred eCCCCCCcccccHHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhc-ccchhhcCH--
Confidence 9988874 6789999999999999999999998776432 111 01122568999999999854 468988776
Q ss_pred cchhhHHHHhhhcccCCC-CCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeEEE
Q 014724 331 VLGVELESAINNAVFPGL-QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLV 409 (419)
Q Consensus 331 ~~~~~l~~~i~~~~~~~~-~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~v 409 (419)
++.+.+.....++. .++.+....++...+|+.... .....+++.++++++.+.|++.|+++.. ++++++.+
T Consensus 262 ----~~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~~~~--~~~~~~~~~~~~~~l~~~L~~~g~~~~~--~~~~~~~i 333 (410)
T PRK13392 262 ----DLIDFVRSFAPGFIFTTALPPAVAAGATAAIRHLKT--SQTERDAHQDRVAALKAKLNANGIPVMP--SPSHIVPV 333 (410)
T ss_pred ----HHHHHHHHhCcchhccCcCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHcCCCCCC--CCCCEEEE
Confidence 56665554332221 122222334444556765542 2345577888999999999999998764 45676666
Q ss_pred Ee
Q 014724 410 DL 411 (419)
Q Consensus 410 d~ 411 (419)
.+
T Consensus 334 ~~ 335 (410)
T PRK13392 334 MV 335 (410)
T ss_pred Ee
Confidence 54
No 103
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.85 E-value=1.5e-19 Score=183.66 Aligned_cols=268 Identities=23% Similarity=0.275 Sum_probs=177.6
Q ss_pred ccccCCCC----hHHHHHHHhhhhhccCCCCCCCCCCCCc-hhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHH
Q 014724 107 LIASENFT----SRAVMEAVGSCLTNKYSEGLPGKRYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPAN 181 (419)
Q Consensus 107 L~~sen~~----~~~V~eal~~~l~~~y~~g~p~~r~~~g-~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~ 181 (419)
...|+||+ +|+|++|+.+.+. +|..+..++|...| .+...++| +.+++++|.+. .++++||++||
T Consensus 49 ~~~sn~ylgl~~~p~v~~a~~~~~~-~~~~~~~~s~~~~g~~~~~~~Le----~~la~~~g~~~-----~l~~~sG~~an 118 (402)
T TIGR01821 49 VWCSNDYLGMGQHPEVLQAMHETLD-KYGAGAGGTRNISGTNIPHVELE----AELADLHGKES-----ALVFTSGYVAN 118 (402)
T ss_pred EeEccCcCCCCCCHHHHHHHHHHHH-HcCCCCcchhhhhCCcHHHHHHH----HHHHHHhCCCe-----EEEECchHHHH
Confidence 45677885 7999999998885 46555555554434 33334555 67888898643 37889999999
Q ss_pred HHHHHHccC--CCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhh---cCCeEEE
Q 014724 182 FEVYTAILK--PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---FRPKLII 256 (419)
Q Consensus 182 ~~~~~all~--pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~---~~pklIi 256 (419)
..++..+.. +||.|+.....|++... .+...|. +...++ ..|+++++++++. .++++|+
T Consensus 119 ~~ai~~l~~~~~~~~v~~~~~~h~s~~~--------~~~~~g~--~~~~~~------~~d~~~l~~~l~~~~~~~~~~v~ 182 (402)
T TIGR01821 119 DATLATLAKIIPGCVIFSDELNHASMIE--------GIRHSGA--EKFIFR------HNDVAHLEKLLQSVDPNRPKIIA 182 (402)
T ss_pred HHHHHHhhCCCCCCEEEEcchHhHHHHH--------HHHHcCC--eEEEEC------CCCHHHHHHHHHhccCCCCeEEE
Confidence 999988765 78888776655654431 1223343 222222 2477888888763 2578999
Q ss_pred EcCCCCC--CcCChHHHHHHHHHhCCEEEEecccccccccc---CCcC-CCC-CCCcEEEeCCCCcCCCCCeeEEEEeCC
Q 014724 257 AGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAA---SVVA-DPF-KYCDVVTTTTHKSLRGPRGGMIFFKKD 329 (419)
Q Consensus 257 ~~~s~~p--~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~---g~~~-~~~-~~~Div~~S~hK~l~GprgG~i~~~~~ 329 (419)
+++++++ ...|+++|.++|++||+++++|++|..|+.+. +... ..+ +..|++++|++|+|+ ..||++++++
T Consensus 183 ~e~~~~~~G~~~~l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g-~~GG~i~~~~- 260 (402)
T TIGR01821 183 FESVYSMDGDIAPIEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFG-VVGGYIAASR- 260 (402)
T ss_pred EcCCCCCCCCccCHHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhc-cCCceeecCH-
Confidence 9887776 46789999999999999999999998776432 1111 011 146899999999984 4668988876
Q ss_pred CcchhhHHHHhhhcccCCC-CCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeEE
Q 014724 330 PVLGVELESAINNAVFPGL-QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVL 408 (419)
Q Consensus 330 ~~~~~~l~~~i~~~~~~~~-~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~ 408 (419)
++.+.+.....+.. .++.+....++...+++.+... +...++..++++++.+.|+++|+++.. +.++++.
T Consensus 261 -----~~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~--~~~~~~~~~~~~~l~~~L~~~g~~~~~--~~~~i~~ 331 (402)
T TIGR01821 261 -----KLIDAIRSYAPGFIFTTSLPPAIAAGATASIRHLKES--QDLRRAHQENVKRLKNLLEALGIPVIP--NPSHIVP 331 (402)
T ss_pred -----HHHHHHHHhCcCceecCcCCHHHHHHHHHHHHHhhcC--HHHHHHHHHHHHHHHHHHHHcCCCcCC--CCCCEEE
Confidence 56666543222211 2222333344444566655432 444566678899999999999988764 3567777
Q ss_pred EEe
Q 014724 409 VDL 411 (419)
Q Consensus 409 vd~ 411 (419)
+.+
T Consensus 332 i~~ 334 (402)
T TIGR01821 332 VII 334 (402)
T ss_pred EEe
Confidence 765
No 104
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.85 E-value=4.8e-19 Score=179.27 Aligned_cols=244 Identities=19% Similarity=0.133 Sum_probs=155.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCceeEecCChH-HHHHHHHHHccCC--CCEEEEeCCCCCccccCccccccccccccc--
Q 014724 147 DELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKP--HDRIMGLDLPHGGHLSHGFMTPKRRVSGTS-- 221 (419)
Q Consensus 147 ~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt-~A~~~~~~all~p--GD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g-- 221 (419)
.++.+.+++++++++|++.++ + +++.+|+ .++.++..+++++ ||+|+++++.|+++... +...+
T Consensus 63 ~~~~~~~~~~la~~~g~~~~~--v-~~~~~g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~--------~~~~~~~ 131 (398)
T cd00613 63 LQALFELQTMLCELTGMDVAN--A-SLQDEATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAV--------ARTRGEP 131 (398)
T ss_pred HHHHHHHHHHHHHHHCCCccc--e-eccCchHHHHHHHHHHHHhcccCCCEEEEcCccCcchHHH--------HHHhccc
Confidence 356667789999999987542 3 3344455 4556666666776 99999999988876421 12222
Q ss_pred cccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC-CCcCCh-HHHHHHHHHhCCEEEEeccccccccccCCcC
Q 014724 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY-PRDFDY-PRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (419)
Q Consensus 222 ~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~-p~~~dl-~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~ 299 (419)
.+.+++.++++ +++.+|++++++.+.+ ++++|++++++. +...|+ ++|+++|++||+++|+|++|..|....
T Consensus 132 ~g~~~~~v~~~-~~~~~d~~~l~~~i~~-~t~~viv~~~~~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~~~~---- 205 (398)
T cd00613 132 LGIEVVEVPSD-EGGTVDLEALKEEVSE-EVAALMVQYPNTLGVFEDLIKEIADIAHSAGALVYVDGDNLNLTGLK---- 205 (398)
T ss_pred CCcEEEEeccC-CCCCcCHHHHHHhcCC-CeEEEEEECCCCCceecchHHHHHHHHHhcCCEEEEEeccccccCCC----
Confidence 01244444444 3567999999999864 789888877653 345565 999999999999999999986543210
Q ss_pred CCCC-CCcEEEeCCCCcC-----CCCCeeEEEEeCCCcchhhHHHHhhhcc------------cCC-----------CCC
Q 014724 300 DPFK-YCDVVTTTTHKSL-----RGPRGGMIFFKKDPVLGVELESAINNAV------------FPG-----------LQG 350 (419)
Q Consensus 300 ~~~~-~~Div~~S~hK~l-----~GprgG~i~~~~~~~~~~~l~~~i~~~~------------~~~-----------~~g 350 (419)
.+-. ++|++++|+||++ +||++|+++.++ ++.+.+.... +.. -.+
T Consensus 206 ~~~~~~~d~~~~s~~K~~~p~g~Ggp~~g~l~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~ 279 (398)
T cd00613 206 PPGEYGADIVVGNLQKTGVPHGGGGPGAGFFAVKK------ELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKA 279 (398)
T ss_pred ChHHcCCCEEEeeccccCCCCCCCCCceeEEEEhh------hhHhhCCCCeeccccccCCCcceEEecccchhhcccccc
Confidence 1111 6899999999997 257889999887 3433321100 000 011
Q ss_pred CCh-----HHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeEEEEeCC
Q 014724 351 GPH-----NHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 351 ~p~-----~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~vd~~~ 413 (419)
+++ ....++...++......+++++.+++.++++++.+.|++.|+.....+...+.+++++..
T Consensus 280 ~~~~~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~v~~~~~~ 347 (398)
T cd00613 280 TSNICTGQALLALMAAMYIVYLGPEGLKEIAERAHLNANYLAKRLKEVGGVLPFNGPFFHEFVLRLPP 347 (398)
T ss_pred cccceecHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCeeEEEEEEcCC
Confidence 111 111122223344444456678889999999999999999865432223344667777653
No 105
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.85 E-value=1.1e-19 Score=183.30 Aligned_cols=267 Identities=18% Similarity=0.128 Sum_probs=178.9
Q ss_pred hhcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChH-
Q 014724 102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS- 178 (419)
Q Consensus 102 ~~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt- 178 (419)
.+.|+|..++|+ +++.+++++.+... ...||.. + ..++ ++.+++++|++++ +|++++|+
T Consensus 52 ~~~i~l~~n~~p~~~~~~v~~a~~~~~~---~~~Yp~~----~---~~~l----r~~ia~~~~~~~~----~I~~t~Ga~ 113 (380)
T PLN03026 52 EDIVKLDANENPYGPPPEVLEALGNMKF---PYVYPDP----E---SRRL----RAALAEDSGLESE----NILVGCGAD 113 (380)
T ss_pred cceEEccCCCCCCCCCHHHHHHHHhhHh---hccCCCC----C---HHHH----HHHHHHHhCcChh----hEEEcCCHH
Confidence 356889888865 57889998864211 1123321 1 1233 4677888898874 46778775
Q ss_pred HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEc
Q 014724 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG 258 (419)
Q Consensus 179 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~ 258 (419)
+++..++.++++|||+|++++|.++.+.. .....|. +++.++.+ +++.+|++++++.+...++|+|+++
T Consensus 114 ~~i~~~~~~~~~~gd~Vlv~~P~y~~y~~--------~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~~~~~~~~~v~l~ 182 (380)
T PLN03026 114 ELIDLLMRCVLDPGDKIIDCPPTFGMYVF--------DAAVNGA--EVIKVPRT-PDFSLDVPRIVEAVETHKPKLLFLT 182 (380)
T ss_pred HHHHHHHHHhcCCCCEEEEcCCChHHHHH--------HHHHcCC--EEEEeecC-CCCCcCHHHHHHHHhccCCcEEEEe
Confidence 69999999999999999999998754321 1234555 44444444 3578999999998844589999999
Q ss_pred CCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcC--CCCCeeEEEEeCCCcc
Q 014724 259 ASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSL--RGPRGGMIFFKKDPVL 332 (419)
Q Consensus 259 ~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l--~GprgG~i~~~~~~~~ 332 (419)
+|+||+ ..+.+++.++++.. ++|++|+++ ..+...+.....++ ...++++|++|+| +|+|.||+++++
T Consensus 183 ~P~NPTG~~~~~~~l~~l~~~~-~~vi~DeaY-~~~~~~~~~~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~~---- 256 (380)
T PLN03026 183 SPNNPDGSIISDDDLLKILELP-ILVVLDEAY-IEFSTQESRMKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFPL---- 256 (380)
T ss_pred CCCCCCCCCCCHHHHHHHHhcC-CEEEEECcc-hhhcCCcchHHHHHhCCCEEEEecchHhhcCccccceeeecCH----
Confidence 999985 57889999999764 899999995 44443221111122 2348899999986 789999999887
Q ss_pred hhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCc-EEecCCCcceeEEEEe
Q 014724 333 GVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGY-KLVSGGSDNHLVLVDL 411 (419)
Q Consensus 333 ~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~-~v~~~~t~~hlv~vd~ 411 (419)
++.+.+.....++. .+... ..+...+|.. .+.+++..+++.++++++.+.|++.|+ .+.+ +..+++|+++
T Consensus 257 --~~i~~l~~~~~~~~--~~~~~-q~aa~~aL~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p--~~~~f~~~~~ 327 (380)
T PLN03026 257 --SIIEYLWRAKQPYN--VSVAA-EVAACAALSN--PKYLEDVKNALVEERERLFGLLKEVPFLEPYP--SDANFILCRV 327 (380)
T ss_pred --HHHHHHHHhcCCCC--CCHHH-HHHHHHHhhC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCeECC--CCCeEEEEEC
Confidence 57676665443322 11222 2222334432 123466777888899999999998864 4433 4567889887
Q ss_pred C
Q 014724 412 R 412 (419)
Q Consensus 412 ~ 412 (419)
.
T Consensus 328 ~ 328 (380)
T PLN03026 328 T 328 (380)
T ss_pred C
Confidence 5
No 106
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.85 E-value=3.8e-19 Score=177.05 Aligned_cols=249 Identities=17% Similarity=0.130 Sum_probs=157.1
Q ss_pred hHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCE
Q 014724 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDR 194 (419)
Q Consensus 115 ~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~ 194 (419)
+|.++++..+.+. +|. | +. ++.+..++++++++|+++++ .+++++|++||..++.++++|||+
T Consensus 35 ~~~~~~~~~~~~~-~~~-g---------~~---~~~~~Le~~lA~~~g~~~e~---ilv~~gg~~a~~~~~~al~~~gd~ 97 (346)
T TIGR03576 35 GFKIDEEDLELLE-TYV-G---------PA---IFEEKVQELGREHLGGPEEK---ILVFNRTSSAILATILALEPPGRK 97 (346)
T ss_pred ChhHHHHHHHHHH-Hhc-C---------CH---HHHHHHHHHHHHHcCCCcce---EEEECCHHHHHHHHHHHhCCCCCE
Confidence 6888888877764 342 2 11 23333447889999996642 255667789999999999999999
Q ss_pred EEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC-CCc---CChHH
Q 014724 195 IMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY-PRD---FDYPR 270 (419)
Q Consensus 195 Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~-p~~---~dl~~ 270 (419)
|+++.|....|.++. ..+.+.|. +.+. . .|+++++. . .++++|++..+++ +.. .|+++
T Consensus 98 Vli~~~d~p~~~s~~-----~~~~l~ga--~~~~--~------~~l~~l~~-~--~~~~lIiitg~s~~G~v~~~~~L~~ 159 (346)
T TIGR03576 98 VVHYLPEKPAHPSIP-----RSCKLAGA--EYFE--S------DELSELKK-I--DGTSLVVITGSTMDLKVVSEEDLKR 159 (346)
T ss_pred EEECCCCCCCchhHH-----HHHHHcCC--EEec--c------CCHHHHhh-C--cCceEEEEECCCCCCcccCHHHHHH
Confidence 997644333332211 12334454 2222 1 24555432 2 3578777654332 222 57899
Q ss_pred HHHHHHHhCCEEEEecccccccccc-CCcCCCCC-CCcEEEeCCCCcCCCCCeeEEEEeCCCcchhhHHHHhhhcccCCC
Q 014724 271 MRQIADAVGALLMMDMAHISGLVAA-SVVADPFK-YCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGL 348 (419)
Q Consensus 271 I~~ia~~~ga~livD~ah~~Gl~~~-g~~~~~~~-~~Div~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~ 348 (419)
|+++|+++|++|++|+||..|.... +. ..... +.|++++|+||+++|+|+||+++++ ++.+.+.....+..
T Consensus 160 i~~la~~~~~~livDEAy~~~~~~~~~~-~~~~~~~~divv~s~SKalaG~r~G~v~~~~------~li~~l~~~~~~~~ 232 (346)
T TIGR03576 160 VIKQAKSKEAIVLVDDASGARVRRLYGQ-PPALDLGADLVVTSTDKLMDGPRGGLLAGRK------ELVDKIKSVGEQFG 232 (346)
T ss_pred HHHHHHHcCCEEEEECCccccccccCCC-CCHHHcCCcEEEeccchhccccceEEEEeCH------HHHHHHHHhhcCcc
Confidence 9999999999999999998765321 11 11111 5789999999999999999999988 67777766544443
Q ss_pred CCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeEEEEeCC
Q 014724 349 QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 349 ~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~vd~~~ 413 (419)
.+.+.. ..++...+|+... .+...+.+.++++.+.+.+++ +.+.. ++.+++|+++++
T Consensus 233 ~s~~~~-~~~aa~~aL~~~~---~~~~~~~l~~r~~~~~~~l~~--~~~~~--~~~~f~~~~~~~ 289 (346)
T TIGR03576 233 LEAQAP-LLAAVVRALEEFE---LSRIRDAFKRKEEVYLRLFDK--LNVER--TPTGFVIKGVEE 289 (346)
T ss_pred cCccHH-HHHHHHHHHhhcc---HHHHHHHHHHHHHHHHHHHHh--CCCCc--CCCeEEEEeCCC
Confidence 333333 3344444665432 244556666777777777764 44443 344579999864
No 107
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.85 E-value=2.4e-19 Score=180.71 Aligned_cols=274 Identities=21% Similarity=0.237 Sum_probs=179.3
Q ss_pred hhcccccccC--CC-ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChH
Q 014724 102 FKSLELIASE--NF-TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS 178 (419)
Q Consensus 102 ~~~i~L~~se--n~-~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt 178 (419)
++.|+|..+. .+ .++.+++++.+.+. ++...+...++..|.. .+.+.+++++++++|.+. .+++++|+
T Consensus 33 ~~~id~~~~~~~g~~~~~~~~~a~~~~~~-~~~~~~~~~~~~~g~~---~l~~~l~~~l~~~~g~~~-----~i~~~sG~ 103 (385)
T TIGR01825 33 KEVINLSSNNYLGFADHPRLKEAAAQAIQ-QYGVGAGAVRTIAGTL---RLHEELEEKLAKFKKTEA-----ALVFQSGF 103 (385)
T ss_pred ceEEEeeccCccCCCCCHHHHHHHHHHHH-HcCCCCCccCcccCCc---HHHHHHHHHHHHHhCCCc-----EEEECcHH
Confidence 3457776553 44 68899999888764 2322222222233432 444556688889888653 37889999
Q ss_pred HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhc---CCeEE
Q 014724 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF---RPKLI 255 (419)
Q Consensus 179 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~---~pklI 255 (419)
+++..++.++++|||.|++.++.|+++.. .+...+. +...+ ..+|++++++.+.+. ++++|
T Consensus 104 ~a~~~a~~~~~~~gd~vi~~~~~~~~~~~--------~~~~~g~--~~~~~------~~~d~~~l~~~l~~~~~~~~~~v 167 (385)
T TIGR01825 104 NTNQGVLSALLRKGDIVLSDELNHASIID--------GLRLTKA--TKKIY------KHADMDDLDRVLRENPSYGKKLI 167 (385)
T ss_pred HHHHHHHHHhCCCCCEEEEEccccHHHHH--------HHHhcCC--ceEEe------CCCCHHHHHHHHHhhccCCCeEE
Confidence 99999999999999999999888766531 1223343 22222 148899998887642 57788
Q ss_pred EEcCCCCC--CcCChHHHHHHHHHhCCEEEEecccccccccc-CC--cC-CCCC-CCcEEEeCCCCcCCCCCeeEEEEeC
Q 014724 256 IAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAA-SV--VA-DPFK-YCDVVTTTTHKSLRGPRGGMIFFKK 328 (419)
Q Consensus 256 i~~~s~~p--~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~-g~--~~-~~~~-~~Div~~S~hK~l~GprgG~i~~~~ 328 (419)
+++...++ ...|+++|.++|++||+++|+|++|..|.... +. .. ..++ ..|++++|+||+| |++||+++.++
T Consensus 168 ~~~~v~~~tG~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~gG~~~~~~ 246 (385)
T TIGR01825 168 VTDGVFSMDGDVAPLPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLEDKVDIQVGTLSKAI-GVVGGYAAGHK 246 (385)
T ss_pred EEecCCcCCCCccCHHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCCcCCcEEEEeccHHh-hcCCCEEecCH
Confidence 88865555 46789999999999999999999986664321 11 00 1122 5789999999999 56789988776
Q ss_pred CCcchhhHHHHhhhcccCCCCCC-ChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeE
Q 014724 329 DPVLGVELESAINNAVFPGLQGG-PHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLV 407 (419)
Q Consensus 329 ~~~~~~~l~~~i~~~~~~~~~g~-p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv 407 (419)
++.+.+.....++..++ ++....+++..+++.+.. ..+..++..++++++.+.|.+.|+++... +.+++
T Consensus 247 ------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~g~~~~~~--~~~~~ 316 (385)
T TIGR01825 247 ------ELIEYLKNRARPFLFSTAQPPAVVAALAAAVDELQR--SPELMERLWDNTRFFKAGLGKLGYDTGGS--ETPIT 316 (385)
T ss_pred ------HHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHcCCCCCCC--CCCEE
Confidence 56666654322222222 233444555556655432 13456777788999999999999887642 23455
Q ss_pred EEEe
Q 014724 408 LVDL 411 (419)
Q Consensus 408 ~vd~ 411 (419)
.+.+
T Consensus 317 ~~~~ 320 (385)
T TIGR01825 317 PVVI 320 (385)
T ss_pred EEEE
Confidence 5544
No 108
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.85 E-value=2e-19 Score=183.34 Aligned_cols=286 Identities=16% Similarity=0.133 Sum_probs=182.0
Q ss_pred hhcccccccCC------CChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcC--------CCCCC
Q 014724 102 FKSLELIASEN------FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN--------LDENK 167 (419)
Q Consensus 102 ~~~i~L~~sen------~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g--------~~~~~ 167 (419)
.+.|+|..+.. ++++.+++++.+.+......+|+.. .|. .++++.+.+++.+.++ ++++
T Consensus 33 ~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~~~~Y~~~---~G~---~~Lr~aia~~~~~~~~~~~~~~~~~~~~- 105 (412)
T PTZ00433 33 KSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGYPPT---VGS---PEAREAVATYWRNSFVHKESLKSTIKKD- 105 (412)
T ss_pred CCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCC---CCc---HHHHHHHHHHHHhhccccccccCCCChh-
Confidence 56688876552 3688999998877653212244431 122 3566666666665543 3342
Q ss_pred CceeEecCCh-HHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCC-CCCCCCHHHHHH
Q 014724 168 WGVNVQPLSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEK 245 (419)
Q Consensus 168 ~~v~V~~~sG-t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~-~~~~iD~d~Le~ 245 (419)
+|++++| ++|+..++.++++|||+|++++|+|..+.. .+...|.. ++.++.++ +++.+|++++++
T Consensus 106 ---~i~it~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~--------~~~~~g~~--~~~i~~~~~~~~~~d~~~l~~ 172 (412)
T PTZ00433 106 ---NVVLCSGVSHAILMALTALCDEGDNILVPAPGFPHYET--------VCKAYGIE--MRFYNCRPEKDWEADLDEIRR 172 (412)
T ss_pred ---hEEEeCChHHHHHHHHHHhcCCCCEEEEccCCcccHHH--------HHHHcCCE--EEEEecCccccCcCCHHHHHH
Confidence 4666776 579999999999999999999998766532 22345654 44444443 356899999999
Q ss_pred HhhhcCCeEEEEcCCCCCCc-----CChHHHHHHHHHhCCEEEEeccccccccccCCc-CCC--CC-C-CcEEEeCCCCc
Q 014724 246 TAILFRPKLIIAGASAYPRD-----FDYPRMRQIADAVGALLMMDMAHISGLVAASVV-ADP--FK-Y-CDVVTTTTHKS 315 (419)
Q Consensus 246 ~l~~~~pklIi~~~s~~p~~-----~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~-~~~--~~-~-~Div~~S~hK~ 315 (419)
.+.+ ++|+|++++|+||+- .++++|.++|+++|++||+|+++ ..+.+.+.. ++. +. . .-++++|++|+
T Consensus 173 ~~~~-~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~ 250 (412)
T PTZ00433 173 LVDD-RTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIY-AGMVFNGATFTSVADFDTTVPRVILGGTAKN 250 (412)
T ss_pred Hhcc-CceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccc-cccccCCCCccchhhccCCCceEEEccchhh
Confidence 8865 789999999999862 35788899999999999999995 466554321 111 11 1 23789999998
Q ss_pred C--CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC
Q 014724 316 L--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL 393 (419)
Q Consensus 316 l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~ 393 (419)
| +|.|.||++...+.....++.+.+....... .+.+.. ...++..++.......+++..+++.++++.+.+.|++.
T Consensus 251 ~~~pGlRlG~~i~~~p~~~~~~~~~~~~~~~~~~-~~~~~~-~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 328 (412)
T PTZ00433 251 LVVPGWRLGWLLLVDPHGNGGDFLDGMKRLGMLV-CGPCSV-VQAALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGEC 328 (412)
T ss_pred cCCCCeeEEEEEEeCCcccHHHHHHHHHHHhhcc-CCCChH-HHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 6 8889999997321000003555444322211 122222 22233334433111234667778888999999999884
Q ss_pred -CcEEecCCCcceeEEEEeC
Q 014724 394 -GYKLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 394 -G~~v~~~~t~~hlv~vd~~ 412 (419)
|+.+... ....++|+++.
T Consensus 329 ~~~~~~~p-~gg~f~~~~l~ 347 (412)
T PTZ00433 329 IGLSPTMP-RGSMFLMSRLD 347 (412)
T ss_pred CCCcccCC-CeeEEEEEEec
Confidence 7765542 34667888874
No 109
>PRK08363 alanine aminotransferase; Validated
Probab=99.85 E-value=6.1e-19 Score=178.89 Aligned_cols=282 Identities=16% Similarity=0.114 Sum_probs=178.6
Q ss_pred hcccccccCC-----CChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCCh
Q 014724 103 KSLELIASEN-----FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG 177 (419)
Q Consensus 103 ~~i~L~~sen-----~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sG 177 (419)
+.|+|..++. .+++.+.+++.+.+.... ..|+. ..| ..++++.+.+++...+|...+. .+|++++|
T Consensus 31 ~~i~l~~g~p~~~~~~p~~~~~~~~~~~~~~~~-~~Y~~---~~g---~~~lr~~ia~~~~~~~g~~~~~--~~i~it~G 101 (398)
T PRK08363 31 KVIRLNIGDPVKFDFQPPEHMKEAYCRAIKEGH-NYYGP---SEG---LPELREAIVKREKRKNGVDITP--DDVRVTAA 101 (398)
T ss_pred CeEEEeCCCCCcCCCCCCHHHHHHHHHHHHcCC-CCCCC---CCC---cHHHHHHHHHHHHHhcCCCCCh--hhEEEeCC
Confidence 4588876653 368899999988765321 12321 112 2367766667776666643321 14666666
Q ss_pred -HHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEec-ccCCCCCCCCHHHHHHHhhhcCCeEE
Q 014724 178 -SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPY-RLDESTGLVDYDMLEKTAILFRPKLI 255 (419)
Q Consensus 178 -t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~-~~~~~~~~iD~d~Le~~l~~~~pklI 255 (419)
++|+..++.++++|||+|++++|.|.++.. .+...|. +.+.+ +.+++++.+|++++++.+.+ ++++|
T Consensus 102 ~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~--------~~~~~g~--~~v~~~~~~~~~~~~d~~~l~~~~~~-~~~~v 170 (398)
T PRK08363 102 VTEALQLIFGALLDPGDEILIPGPSYPPYTG--------LVKFYGG--VPVEYRTIEEEGWQPDIDDIRKKITE-KTKAI 170 (398)
T ss_pred HHHHHHHHHHHhCCCCCEEEEcCCCCcchHH--------HHHHcCC--EEEEeccccccCCcCCHHHHHhhCCc-ceEEE
Confidence 679999999999999999999998876542 1233444 44444 34444567999999998864 78999
Q ss_pred EEcCCCCCC--cCC---hHHHHHHHHHhCCEEEEeccccccccccCCcCCC--CCC-C-cEEEeCCCCcC--CCCCeeEE
Q 014724 256 IAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP--FKY-C-DVVTTTTHKSL--RGPRGGMI 324 (419)
Q Consensus 256 i~~~s~~p~--~~d---l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~--~~~-~-Div~~S~hK~l--~GprgG~i 324 (419)
++++|+||+ ..+ +++|.++|+++|+++|+|+++ ..+.+.+...+. +.. . -+++.|+||+| +|.|.||+
T Consensus 171 ~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay-~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~ 249 (398)
T PRK08363 171 AVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIY-DLMTYEGKHVSPGSLTKDVPVIVMNGLSKVYFATGWRLGYI 249 (398)
T ss_pred EEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhh-hhhccCCcccCHHHcCcCCcEEEEecchhccCCccceEEEE
Confidence 999999985 233 889999999999999999995 444544322111 122 2 26689999985 78899999
Q ss_pred EE-eCCCcchhhHHHHhhhcccC---CCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEEec
Q 014724 325 FF-KKDPVLGVELESAINNAVFP---GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVS 399 (419)
Q Consensus 325 ~~-~~~~~~~~~l~~~i~~~~~~---~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~~ 399 (419)
+. .++ ++.+.+...... ...+.... ...+...++... .+..++..+++.++++.+.+.|.+. |+.+..
T Consensus 250 ~~~~~~-----~~~~~l~~~~~~~~~~~~~~s~~-~q~~~~~~l~~~-~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 322 (398)
T PRK08363 250 YFVDPE-----GKLAEVREAIDKLARIRLCPNTP-AQFAAIAGLTGP-MDYLEEYMKKLKERRDYIYKRLNEIPGISTTK 322 (398)
T ss_pred EEeCcH-----HHHHHHHHHHHHHhcccccCChH-HHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHhcCCCCEecC
Confidence 98 222 333333221100 00111111 222223344321 2345677788889999999999887 777654
Q ss_pred CCCcceeEEEEeCC
Q 014724 400 GGSDNHLVLVDLRP 413 (419)
Q Consensus 400 ~~t~~hlv~vd~~~ 413 (419)
...+.++|+++.+
T Consensus 323 -p~g~~~~~~~l~~ 335 (398)
T PRK08363 323 -PQGAFYIFPRIEE 335 (398)
T ss_pred -CCeEEEEEEEecc
Confidence 2345667767754
No 110
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.85 E-value=1.5e-19 Score=179.59 Aligned_cols=235 Identities=20% Similarity=0.202 Sum_probs=160.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHc-cCCCCEEEEeCCCCCccccCcccccccccccccccc
Q 014724 146 IDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYF 224 (419)
Q Consensus 146 ~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~al-l~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~ 224 (419)
..++| +.+++++|.+. .++++||+.|+..++.++ ++|||+|+++.+.|.+... .+...|.
T Consensus 20 ~~~~~----~~la~~~~~~~-----~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~--------~~~~~g~-- 80 (352)
T cd00616 20 VREFE----KAFAEYLGVKY-----AVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATAN--------AILLLGA-- 80 (352)
T ss_pred HHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHH--------HHHHcCC--
Confidence 44555 67888898753 367789999999999998 6899999999988765431 2234454
Q ss_pred EEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCCcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC-
Q 014724 225 ESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK- 303 (419)
Q Consensus 225 ~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~- 303 (419)
+++.++++++++.+|++++++.++ .++++|++.+ .++...|+++|.++|+++|+++|+|++|..|....+. ++.
T Consensus 81 ~~~~~~~~~~~~~~d~~~l~~~i~-~~~~~v~~~~-~~G~~~~~~~i~~l~~~~~i~li~D~a~~~g~~~~~~---~~~~ 155 (352)
T cd00616 81 TPVFVDIDPDTYNIDPELIEAAIT-PRTKAIIPVH-LYGNPADMDAIMAIAKRHGLPVIEDAAQALGATYKGR---KVGT 155 (352)
T ss_pred eEEEEecCCCcCCcCHHHHHHhcC-cCCeEEEEEC-CCCCcCCHHHHHHHHHHcCCeEEEECCCCCCCeECCE---Eccc
Confidence 555666664468899999999886 4789888765 3566789999999999999999999999888654321 122
Q ss_pred CCcEEEeCCC--CcCCCCCeeEEEEeCCCcchhhHHHHhhhcccCCCC-----------C-CChHHHHHHHHHHHHHhcC
Q 014724 304 YCDVVTTTTH--KSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQ-----------G-GPHNHTIGGLAVCLKHAQS 369 (419)
Q Consensus 304 ~~Div~~S~h--K~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~-----------g-~p~~~~iaala~al~~~~~ 369 (419)
..|+.++|+| |+++++.||+++++++ ++.+++......+.. + +..+..+.+ +.++..+
T Consensus 156 ~~d~~~~S~~~~K~~~~~~gg~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a-a~~~~~l-- 227 (352)
T cd00616 156 FGDAGAFSFHPTKNLTTGEGGAVVTNDE-----ELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEIQA-AIGLAQL-- 227 (352)
T ss_pred CcceeEEcCCCCCCCcccCceEEEECCH-----HHHHHHHHHHHcCCCCCCCccccceeeeccCcCHHHH-HHHHHHH--
Confidence 3688888866 9998888999988764 455544322111110 0 001111111 1122222
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhC-CcEEecCC----CcceeEEEEeC
Q 014724 370 PEFKVYQNKVVSNCRALASRLVEL-GYKLVSGG----SDNHLVLVDLR 412 (419)
Q Consensus 370 ~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~~~~----t~~hlv~vd~~ 412 (419)
..++++.++..++++++.+.|.+. |++++... ...+++.+.+.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~ 275 (352)
T cd00616 228 EKLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLD 275 (352)
T ss_pred HhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEEC
Confidence 245777888899999999999985 88876432 23466777765
No 111
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.85 E-value=1.3e-19 Score=169.84 Aligned_cols=261 Identities=18% Similarity=0.144 Sum_probs=190.9
Q ss_pred ccccccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHH
Q 014724 105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEV 184 (419)
Q Consensus 105 i~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~ 184 (419)
..|+|++.-+|+.|++|+.... .|+. ..++.. +-+.+.+-++..|....+. ..++.++|+.|++++
T Consensus 19 ~L~gPGPsnl~~~V~~A~~~~~-----lgh~------sPe~~q-Im~~v~egikyVFkT~n~~--tf~isgsGh~g~E~a 84 (385)
T KOG2862|consen 19 TLLGPGPSNLSGRVQEAMSRPS-----LGHM------SPEFVQ-IMDEVLEGIKYVFKTANAQ--TFVISGSGHSGWEAA 84 (385)
T ss_pred eeecCCCcCCCHHHHHhhcCCc-----cccC------CHHHHH-HHHHHHHHHHHHhccCCCc--eEEEecCCcchHHHH
Confidence 4788999889999999997543 2322 224443 3345667888899887753 357888999999999
Q ss_pred HHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcC--CCC
Q 014724 185 YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA--SAY 262 (419)
Q Consensus 185 ~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~--s~~ 262 (419)
+..+++|||.|++... |.+++.+.. -.+..|..+.+++ .+ ......++++++.+..++|++|++.+ +++
T Consensus 85 l~N~lePgd~vLv~~~---G~wg~ra~D---~~~r~ga~V~~v~--~~-~G~~~~le~i~~~lsqh~p~~vfv~hgdsST 155 (385)
T KOG2862|consen 85 LVNLLEPGDNVLVVST---GTWGQRAAD---CARRYGAEVDVVE--AD-IGQAVPLEEITEKLSQHKPKAVFVTHGDSST 155 (385)
T ss_pred HHhhcCCCCeEEEEEe---chHHHHHHH---HHHhhCceeeEEe--cC-cccCccHHHHHHHHHhcCCceEEEEecCccc
Confidence 9999999999998753 444443211 1234566555554 33 35679999999999999999987654 566
Q ss_pred CCcCC-hHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcCCCCCe-eEEEEeCCCcchhhHHH
Q 014724 263 PRDFD-YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELES 338 (419)
Q Consensus 263 p~~~d-l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~ 338 (419)
+..+| ++.+.++|++|+++++||.....|-. +..++ ++|+..+.++|.+.+|.| +.|.+++. ..+
T Consensus 156 gV~q~~~~~~g~lc~k~~~lllVD~VaSlggt-----~F~mDewgVDvaytgSQKaL~aP~GLsiisfS~k------a~~ 224 (385)
T KOG2862|consen 156 GVLQDLLAISGELCHKHEALLLVDTVASLGGT-----EFEMDEWGVDVAYTGSQKALGAPAGLSIISFSDK------ALE 224 (385)
T ss_pred cccchHHHHHHHHhhcCCeEEEEechhhcCCc-----cceehhhcccEEEecchhhcCCCCCcceeecCHH------HHH
Confidence 66778 68899999999999999997554422 22334 899999999999999998 77776663 222
Q ss_pred Hhh---------------hcccCCC-------CCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcE
Q 014724 339 AIN---------------NAVFPGL-------QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYK 396 (419)
Q Consensus 339 ~i~---------------~~~~~~~-------~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~ 396 (419)
+++ ...|.+. .-+|+...+.++-+||..+.++++++.++++++++++|...|++.|++
T Consensus 225 ~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~GLq 304 (385)
T KOG2862|consen 225 AIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEALGLQ 304 (385)
T ss_pred HHhhccCCceEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 221 1112221 125666778888889999888888999999999999999999999988
Q ss_pred Eec
Q 014724 397 LVS 399 (419)
Q Consensus 397 v~~ 399 (419)
...
T Consensus 305 ~fv 307 (385)
T KOG2862|consen 305 LFV 307 (385)
T ss_pred cee
Confidence 664
No 112
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.85 E-value=9.8e-20 Score=189.33 Aligned_cols=285 Identities=14% Similarity=0.101 Sum_probs=176.0
Q ss_pred hcccccccCCCC-----hHHHHHHHhhhhhcc-CCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcC----CCCCCCceeE
Q 014724 103 KSLELIASENFT-----SRAVMEAVGSCLTNK-YSEGLPGKRYYGGNEYIDELETLCQKRALAAFN----LDENKWGVNV 172 (419)
Q Consensus 103 ~~i~L~~sen~~-----~~~V~eal~~~l~~~-y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g----~~~~~~~v~V 172 (419)
..|+|...||.+ ++.+++.....+... ....|+....|+......++.+.+.+++.+.+| ++++ +|
T Consensus 47 g~i~l~~aEN~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe----~I 122 (496)
T PLN02376 47 GIIQMGLAENQLCLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFRQAIAHFMGKARGGKVTFDPE----RV 122 (496)
T ss_pred ceEEeecchhhhhHHHHHHHHHhCchhhccccccccccchhhccCCCCCcHHHHHHHHHHHHHHhCCCCcCChh----hE
Confidence 358999999976 333333322211111 000122211222222234677777788888777 5553 36
Q ss_pred ecCCh-HHHHHHHHHHccCCCCEEEEeCCCCCccccCcccccccccc-ccccccEEEecccCC-CCCCCCHHHHHHHhhh
Q 014724 173 QPLSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVS-GTSIYFESMPYRLDE-STGLVDYDMLEKTAIL 249 (419)
Q Consensus 173 ~~~sG-t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~-~~g~~~~~v~~~~~~-~~~~iD~d~Le~~l~~ 249 (419)
++++| ++|+..++.++++|||.|++++|.|+++.. .+. ..|. ++++++++. +++.+|++.+++.++.
T Consensus 123 vit~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~--------~~~~~~G~--~vv~v~~~~~~~~~~~~~~le~a~~~ 192 (496)
T PLN02376 123 VMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDR--------DLRWRTGV--EIIPVPCSSSDNFKLTVDAADWAYKK 192 (496)
T ss_pred EEccchHHHHHHHHHHhCCCCCEEEECCCCccchHH--------HHHhhCCC--EEEEEeCCCCccCcCCHHHHHHHHHH
Confidence 66776 569999999999999999999999877642 122 2454 555665643 3568999999876431
Q ss_pred -----cCCeEEEEcCCCCCC--cC---ChHHHHHHHHHhCCEEEEeccccccccccCC-cCCC--C----C--C--Cc--
Q 014724 250 -----FRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASV-VADP--F----K--Y--CD-- 306 (419)
Q Consensus 250 -----~~pklIi~~~s~~p~--~~---dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~-~~~~--~----~--~--~D-- 306 (419)
.++|+|++++|+||+ .. .+++|.++|++||++||+|++| ..+++.+. +++. + + . .+
T Consensus 193 a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY-~~~~f~~~~~~si~~l~~~~~~~~~~~~~v 271 (496)
T PLN02376 193 AQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIY-AATVFAGGDFVSVAEVVNDVDISEVNVDLI 271 (496)
T ss_pred HHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCc-cccccCCCCcccHHHhhccccccccCCCeE
Confidence 368989999999995 33 3677889999999999999995 45554432 2111 1 1 1 12
Q ss_pred EEEeCCCCcC--CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHH-H----HHHHHH
Q 014724 307 VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF-K----VYQNKV 379 (419)
Q Consensus 307 iv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~-~----~~~~~v 379 (419)
+++.|+||.| +|.|.|+++.+++ .+.+.+......+. .+ .....+++..+. ..++ + +.++++
T Consensus 272 ~vv~S~SK~~glpGlRvG~li~~~~-----~l~~~~~~~~~~~~--vs-~~~Q~a~~~~L~---d~~~~~~~l~~~r~~l 340 (496)
T PLN02376 272 HIVYSLSKDMGLPGFRVGIVYSFND-----SVVSCARKMSSFGL--VS-SQTQLMLASMLS---DDQFVDNFLMESSRRL 340 (496)
T ss_pred EEEEeccccCCCCcceEEEEEECCH-----HHHHHHHHHhhcCC--CC-HHHHHHHHHHhC---ChhHHHHHHHHHHHHH
Confidence 4579999987 7899999998653 45544433221111 11 112222222232 2222 3 335667
Q ss_pred HHHHHHHHHHHHhCCcEEecCCCcceeEEEEeCCc
Q 014724 380 VSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPM 414 (419)
Q Consensus 380 ~~n~~~l~~~L~~~G~~v~~~~t~~hlv~vd~~~~ 414 (419)
.+.++.+.+.|++.|+++..+ ....++|+|+++.
T Consensus 341 ~~r~~~l~~~L~~~gi~~~~~-~aG~flwi~l~~~ 374 (496)
T PLN02376 341 GIRHKVFTTGIKKADIACLTS-NAGLFAWMDLRHL 374 (496)
T ss_pred HHHHHHHHHHHHHCCCcccCC-CceEEEEEEchhh
Confidence 777888999999889887653 4457899999753
No 113
>PRK07324 transaminase; Validated
Probab=99.85 E-value=2.2e-19 Score=180.70 Aligned_cols=261 Identities=19% Similarity=0.151 Sum_probs=167.0
Q ss_pred hcccccccCC-C-ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHc-CCCCCCCceeEecCCh-H
Q 014724 103 KSLELIASEN-F-TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAF-NLDENKWGVNVQPLSG-S 178 (419)
Q Consensus 103 ~~i~L~~sen-~-~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~-g~~~~~~~v~V~~~sG-t 178 (419)
+.+.|..+|. + +++.+ +++.+.+.+.. .+|.. ..|.. +++ +.+++++ +++++ +|++++| +
T Consensus 27 ~~~~~~~~e~~~~~~~~~-~~~~~~~~~~~-~~Y~~---~~G~~---~lr----~~ia~~~~~~~~~----~vi~t~G~~ 90 (373)
T PRK07324 27 CIDSLTLEELLALAGKNP-EAFYQELGQKK-LTYGW---IEGSP---EFK----EAVASLYQNVKPE----NILQTNGAT 90 (373)
T ss_pred CCCCCcHHHHHhccCcch-HHHHHHHhcCC-ccCCC---CCCCH---HHH----HHHHHHhcCCChh----hEEEcCChH
Confidence 4466666662 2 46666 66665554321 23432 12333 555 3455555 35553 3556665 6
Q ss_pred HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCC-CCCCCHHHHHHHhhhcCCeEEEE
Q 014724 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIA 257 (419)
Q Consensus 179 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~-~~~iD~d~Le~~l~~~~pklIi~ 257 (419)
+|+.+++.++++|||+|+++.|.+..+.. .+...|. +++.++++++ ++.+|++++++.+.+ ++|+|++
T Consensus 91 ~al~~~~~~l~~~gd~Vl~~~P~y~~~~~--------~~~~~g~--~v~~v~~~~~~~~~~d~~~l~~~~~~-~~kli~i 159 (373)
T PRK07324 91 GANFLVLYALVEPGDHVISVYPTYQQLYD--------IPESLGA--EVDYWQLKEENGWLPDLDELRRLVRP-NTKLICI 159 (373)
T ss_pred HHHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHcCC--EEEEEecccccCCCCCHHHHHHhCCC-CCcEEEE
Confidence 79999999999999999999987765431 1234555 4445555543 457899999998864 7999999
Q ss_pred cCCCCCC--cCC---hHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcC--CCCCeeEEEEeC
Q 014724 258 GASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSL--RGPRGGMIFFKK 328 (419)
Q Consensus 258 ~~s~~p~--~~d---l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l--~GprgG~i~~~~ 328 (419)
++|+||+ ..+ +++|+++|++||++|++|+++ .++...+..++..+ ...|+++|++|++ +|+|.||+++++
T Consensus 160 ~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y-~~l~~~~~~~s~~~~~~~~I~~~s~SK~~~~~G~RiG~i~~~~ 238 (373)
T PRK07324 160 NNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVY-RPLDEDGSTPSIADLYEKGISTNSMSKTYSLPGIRVGWIAANE 238 (373)
T ss_pred eCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccc-cccccCCCCCChhhccCCEEEEecchhhcCCccceeEEEecCH
Confidence 9999985 445 788999999999999999994 56665432222222 2247889999986 689999999976
Q ss_pred CCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEEec
Q 014724 329 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVS 399 (419)
Q Consensus 329 ~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~~ 399 (419)
++.+.+.........+.+.....++ ..+++.. ....++..+.+.++++.+.+.|++. ++.+..
T Consensus 239 ------~li~~~~~~~~~~~~~~~~~~q~~a-~~~l~~~-~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 302 (373)
T PRK07324 239 ------EVIDILRKYRDYTMICAGVFDDMLA-SLALEHR-DAILERNRKIVRTNLAILDEWVAKEPRVSYVK 302 (373)
T ss_pred ------HHHHHHHHHhCcEEecCChHHHHHH-HHHHcCH-HHHHHHHHHHHHHHHHHHHHHHhcCCCceEEC
Confidence 6777666543222222222222222 2234321 1223556677778888899999876 666554
No 114
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.85 E-value=3.2e-19 Score=181.68 Aligned_cols=290 Identities=14% Similarity=0.065 Sum_probs=181.3
Q ss_pred hhcccccccCC------CChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecC
Q 014724 102 FKSLELIASEN------FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPL 175 (419)
Q Consensus 102 ~~~i~L~~sen------~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~ 175 (419)
++.|+|..++. .+++.+++++.+.+......+|+. ..|.. ++.+.+.+++.+.+|.+.+ . .+|+++
T Consensus 32 ~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~---~~G~~---~lr~aia~~~~~~~g~~~~-~-~~I~it 103 (409)
T PLN00143 32 RLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFNSYAP---TGGIL---PARRAIADYLSNDLPYQLS-P-DDVYLT 103 (409)
T ss_pred CceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCCCCCC---CCCCH---HHHHHHHHHHHhhcCCCCC-H-hhEEEe
Confidence 56688887653 478899999888765432223422 12333 5666666777666654332 1 246667
Q ss_pred Ch-HHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCC-CCCCCCHHHHHHHhhhcCCe
Q 014724 176 SG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPK 253 (419)
Q Consensus 176 sG-t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~-~~~~iD~d~Le~~l~~~~pk 253 (419)
+| ++|+..++.++++|||.|++.+|.|..+.. .+...|. +.+.++.++ +++.+|+++|++++++ +++
T Consensus 104 ~G~~~al~~~~~~l~~~gd~v~v~~P~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~ 172 (409)
T PLN00143 104 LGCKHAAEIIIKVLARPEANILLPRPGFPDVET--------YAIFHHL--EIRHFDLLPEKGWEVDLDAVEAIADE-NTI 172 (409)
T ss_pred cChHHHHHHHHHHHcCCCCEEEEcCCCCcCHHH--------HHHHcCC--EEEEEeccCCCCCcCCHHHHHHhccc-CCE
Confidence 77 569999999999999999999998766532 1234455 444444432 3567999999998754 688
Q ss_pred EEEEcCCCCCC--cCC---hHHHHHHHHHhCCEEEEeccccccccccCCcCCCC---CC--CcEEEeCCCCcC--CCCCe
Q 014724 254 LIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KY--CDVVTTTTHKSL--RGPRG 321 (419)
Q Consensus 254 lIi~~~s~~p~--~~d---l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~---~~--~Div~~S~hK~l--~Gprg 321 (419)
++++++|+||+ ..+ +++|.++|++|+++||+|++| ..+.+.+....++ +. .-++++|+||+| +|+|.
T Consensus 173 ~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y-~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRv 251 (409)
T PLN00143 173 AMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVY-GHIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGWGL 251 (409)
T ss_pred EEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccc-cccccCCCCCcchhhhcccCcEEEEccchhhcCCCccce
Confidence 88888899995 333 678899999999999999994 5666543211222 21 127899999984 89999
Q ss_pred eEEEEe-CCCc-chhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEE-e
Q 014724 322 GMIFFK-KDPV-LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKL-V 398 (419)
Q Consensus 322 G~i~~~-~~~~-~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v-~ 398 (419)
||+++. ++.. ...+..+.+.....+... .+ .....++..++..-....+++..++++++++.+.+.|.+.+... .
T Consensus 252 G~~v~~~p~~~~~~~~~~~~~~~~~~~~~~-~~-~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~ 329 (409)
T PLN00143 252 GWLVTCDPSGLLQICEIADSIKKALNPAPF-PP-TFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEIPCIMCP 329 (409)
T ss_pred EEEEeeCchhhhhhHHHHHHHHHHHhccCC-CC-chHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 999984 3210 000112223222211111 11 12233333344321112357778888888899999998875332 2
Q ss_pred cCCCcceeEEEEeCC
Q 014724 399 SGGSDNHLVLVDLRP 413 (419)
Q Consensus 399 ~~~t~~hlv~vd~~~ 413 (419)
.......++|+++..
T Consensus 330 ~~p~gg~f~w~~l~~ 344 (409)
T PLN00143 330 QKAEGAFFALVKLNL 344 (409)
T ss_pred CCCCeeEEEEEecch
Confidence 223356789999863
No 115
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.84 E-value=2e-19 Score=181.37 Aligned_cols=246 Identities=19% Similarity=0.196 Sum_probs=165.7
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHc-cCCC
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPH 192 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~al-l~pG 192 (419)
.+++.++++.+.+...+ + ..| ....++| +.+++++|.+. .+.++||+.|+.+++.++ ++||
T Consensus 8 ~~~~~~~~v~~~~~~~~---~-----~~g-~~~~~le----~~la~~~g~~~-----~v~~~sgt~al~~~l~al~~~~G 69 (380)
T TIGR03588 8 IDQDDIDAVVEVLKSDF---L-----TQG-PTVPAFE----EALAEYVGAKY-----AVAFNSATSALHIACLALGVGPG 69 (380)
T ss_pred CCHHHHHHHHHHHhcCC---c-----cCC-hhHHHHH----HHHHHHHCCCe-----EEEEcCHHHHHHHHHHHcCCCCC
Confidence 34455667766664422 1 112 2345565 56788899875 266789999999999999 8999
Q ss_pred CEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhh---cCCeEEEEcCCCCCCcCChH
Q 014724 193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---FRPKLIIAGASAYPRDFDYP 269 (419)
Q Consensus 193 D~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~---~~pklIi~~~s~~p~~~dl~ 269 (419)
|+|++++++|.++.. .+...|. +++.++++++++.+|++++++.+++ .++++|++.++ ++...|++
T Consensus 70 d~Viv~~~~~~~~~~--------~~~~~G~--~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~~~~-~G~~~~~~ 138 (380)
T TIGR03588 70 DRVWTTPITFVATAN--------CALYCGA--KVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVPVDF-AGKSVDMQ 138 (380)
T ss_pred CEEEeCCcchHHHHH--------HHHHcCC--EEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEEeCC-CCccCCHH
Confidence 999999987755421 2334555 5666666666788999999999973 36888886653 56678999
Q ss_pred HHHHHHHHhCCEEEEeccccccccccCCcCCCCCCCcEEEeCCC--CcCCCCCeeEEEEeCCCcchhhHHHHhhhcccCC
Q 014724 270 RMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTH--KSLRGPRGGMIFFKKDPVLGVELESAINNAVFPG 347 (419)
Q Consensus 270 ~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~~~Div~~S~h--K~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~ 347 (419)
+|.++|++||++||+|++|+.|....+......++.|+.++|+| |+++.+.||+++++++ ++.+++......+
T Consensus 139 ~i~~l~~~~~~~lI~D~a~a~g~~~~~~~~g~~~~~d~~~~S~~~~K~~~~~~GG~v~~~~~-----~~~~~~~~~~~~g 213 (380)
T TIGR03588 139 AIAALAKKHGLKIIEDASHALGAEYGGKPVGNCRYADATVFSFHPVKIITTAEGGAVTTNDE-----ELAERMRLLRSHG 213 (380)
T ss_pred HHHHHHHHcCCEEEEECCCcccCccCCEeCCCccccceEEEecCCCCcccccCceEEEECCH-----HHHHHHHHHHHCC
Confidence 99999999999999999999886543321111124599999998 8898889999999875 5555443211100
Q ss_pred C---------------------CC-CChHHHH-HHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEE
Q 014724 348 L---------------------QG-GPHNHTI-GGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKL 397 (419)
Q Consensus 348 ~---------------------~g-~p~~~~i-aala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v 397 (419)
. .| +..+..+ +++ ++.++. .++++.++.+++++++.+.|.+. ++.+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~--g~~qL~--~l~~~~~~r~~~~~~~~~~L~~~~~~~~ 283 (380)
T TIGR03588 214 ITKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAAL--GLSQLK--KLDRFVAKRREIAARYDRLLKDLPYFTP 283 (380)
T ss_pred CCCCcccccccccCcceeeeeccccccCccHHHHHH--HHHHHH--HHHHHHHHHHHHHHHHHHHhcCCCCccC
Confidence 0 01 1111122 222 333432 36778888899999999999886 3443
No 116
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.84 E-value=3.1e-20 Score=186.46 Aligned_cols=265 Identities=17% Similarity=0.144 Sum_probs=176.2
Q ss_pred hhcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChH-
Q 014724 102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS- 178 (419)
Q Consensus 102 ~~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt- 178 (419)
.+.|.|..++|. +|+.+++++.+.+.+.. .||. .|. .++ ++.+++++|++++ +|++++|+
T Consensus 29 ~~~i~l~~nen~~~~~~~v~~a~~~~~~~~~--~Yp~----~g~---~~L----r~aia~~~~~~~~----~I~vt~Gs~ 91 (366)
T PRK01533 29 HSFVKLASNENPFGCSPRVLDELQKSWLDHA--LYPD----GGA---TTL----RQTIANKLHVKME----QVLCGSGLD 91 (366)
T ss_pred CceEEeCCCCCCCCCCHHHHHHHHHHHHhcC--cCCC----CCH---HHH----HHHHHHHhCCCcc----eEEECCCHH
Confidence 356889888875 58999999987654321 2432 121 233 3567778898874 47777775
Q ss_pred HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEc
Q 014724 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG 258 (419)
Q Consensus 179 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~ 258 (419)
+++..++.++++|||+|++++|+|..+.. .+...|. ++++++.+ ++.+|++++++.+++ ++|+|+++
T Consensus 92 e~i~~~~~~l~~~gd~vlv~~P~y~~~~~--------~~~~~g~--~v~~v~~~--~~~~d~~~l~~~~~~-~~~~v~i~ 158 (366)
T PRK01533 92 EVIQIISRAVLKAGDNIVTAGATFPQYRH--------HAIIEGC--EVKEVALN--NGVYDLDEISSVVDN-DTKIVWIC 158 (366)
T ss_pred HHHHHHHHHhcCCCCEEEEcCCcHHHHHH--------HHHHcCC--EEEEeecC--CCCcCHHHHHHHhCc-CCcEEEEe
Confidence 69999999999999999999998766532 2234565 44444443 457999999998864 78999999
Q ss_pred CCCCCC--cCChHHH---HHHHHHhCCEEEEeccccccccccCCcCCCC---C-C-CcEEEeCCCCcC--CCCCeeEEEE
Q 014724 259 ASAYPR--DFDYPRM---RQIADAVGALLMMDMAHISGLVAASVVADPF---K-Y-CDVVTTTTHKSL--RGPRGGMIFF 326 (419)
Q Consensus 259 ~s~~p~--~~dl~~I---~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~---~-~-~Div~~S~hK~l--~GprgG~i~~ 326 (419)
+|+||+ ..+.+++ +++|++++ ++++|++++ .+...+..+..+ + + .-|++.|++|+| +|.|.||+++
T Consensus 159 ~P~NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~-~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~ 236 (366)
T PRK01533 159 NPNNPTGTYVNDRKLTQFIEGISENT-LIVIDEAYY-EYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVG 236 (366)
T ss_pred CCCCCCCCCcCHHHHHHHHHhCCCCC-EEEEEccHH-HhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhC
Confidence 999995 4455555 44455555 677899964 554332211211 1 2 237899999986 7889999998
Q ss_pred eCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHH-HHHHHHHHHHHHHHHHHHHhCCcEEecCCCcce
Q 014724 327 KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF-KVYQNKVVSNCRALASRLVELGYKLVSGGSDNH 405 (419)
Q Consensus 327 ~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~-~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~h 405 (419)
++ ++.+.+.....++ + .+.....++..++. ..++ +...+...++++++.+.|++.|+++.. ++.+
T Consensus 237 ~~------~~~~~l~~~~~~~--~-~~~~~q~aa~~~l~---~~~~~~~~~~~~~~~r~~~~~~l~~~g~~~~~--~~~n 302 (366)
T PRK01533 237 HE------ELIEKLNVVRLPF--N-VSSLAQKAATIAFG---DDEFIEEIVRVNTEGLRQYESFCKENEIPFYQ--SQTN 302 (366)
T ss_pred CH------HHHHHHHHhcCCC--C-cCHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHhCCCccCC--CcCc
Confidence 76 6777776543322 1 22222223333442 2233 556677778888888999888988765 3566
Q ss_pred eEEEEeC
Q 014724 406 LVLVDLR 412 (419)
Q Consensus 406 lv~vd~~ 412 (419)
++|+++.
T Consensus 303 f~~~~~~ 309 (366)
T PRK01533 303 FIFLPVE 309 (366)
T ss_pred EEEEeCC
Confidence 7999873
No 117
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.84 E-value=6.2e-19 Score=179.14 Aligned_cols=281 Identities=14% Similarity=0.053 Sum_probs=184.2
Q ss_pred hhcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCCh-H
Q 014724 102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-S 178 (419)
Q Consensus 102 ~~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sG-t 178 (419)
.+.++|..+... +++.+.+++.+.+.... .+|+. ..|.. ++++.+.+++++.+|.+... .+|++++| +
T Consensus 33 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~-~~Y~~---~~G~~---~lr~~ia~~l~~~~g~~~~~--~~i~~t~G~~ 103 (402)
T PRK06107 33 RSIVDLTVGEPDFDTPDHIKQAAVAAIERGE-TKYTL---VNGTP---ALRKAIIAKLERRNGLHYAD--NEITVGGGAK 103 (402)
T ss_pred CCEEEcCCCCCCCCCCHHHHHHHHHHHHcCC-CCCCC---CCCCH---HHHHHHHHHHHHhcCCCCCh--hhEEEeCCHH
Confidence 445888776644 46888898888775321 23432 12332 56666778888888885421 24677777 5
Q ss_pred HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCC-CCCCCCHHHHHHHhhhcCCeEEEE
Q 014724 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKLIIA 257 (419)
Q Consensus 179 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~-~~~~iD~d~Le~~l~~~~pklIi~ 257 (419)
+|+..++.++++|||+|++++|.+.++.. .+...+. ..+.++.++ +++.+|++++++.+.+ ++++|++
T Consensus 104 ~al~~~~~~~~~~gd~vl~~~p~y~~y~~--------~~~~~~~--~~~~v~~~~~~~~~~~~~~l~~~~~~-~~~~v~l 172 (402)
T PRK06107 104 QAIFLALMATLEAGDEVIIPAPYWVSYPD--------MVLANDG--TPVIVACPEEQGFKLTPEALEAAITP-RTRWLIL 172 (402)
T ss_pred HHHHHHHHHhcCCCCEEEEecCCCcCHHH--------HHHHcCC--EEEEecCCcccCCCCCHHHHHhhcCc-CceEEEE
Confidence 79999999999999999999997765531 1223333 344444442 3467999999998864 7888888
Q ss_pred cCCCCCCc--C---ChHHHHHHHHHh-CCEEEEeccccccccccCC-cCCCC---CC---CcEEEeCCCCcC--CCCCee
Q 014724 258 GASAYPRD--F---DYPRMRQIADAV-GALLMMDMAHISGLVAASV-VADPF---KY---CDVVTTTTHKSL--RGPRGG 322 (419)
Q Consensus 258 ~~s~~p~~--~---dl~~I~~ia~~~-ga~livD~ah~~Gl~~~g~-~~~~~---~~---~Div~~S~hK~l--~GprgG 322 (419)
++|+||+- . ++++|+++|+++ |+++|+|+++ ..+.+.+. .++.. ++ .-++++|+||+| +|.|.|
T Consensus 173 ~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y-~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG 251 (402)
T PRK06107 173 NAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIY-DHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIG 251 (402)
T ss_pred ECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhc-cccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCccccee
Confidence 88999852 3 467888889998 9999999995 34544332 12111 11 237789999987 788999
Q ss_pred EEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEEecCC
Q 014724 323 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGG 401 (419)
Q Consensus 323 ~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~~~~ 401 (419)
|++.++ ++.+.+........ .+++.....++..++.. .....++..+++.++++.+.+.|++. |+++.. .
T Consensus 252 ~~~~~~------~~~~~~~~~~~~~~-~~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~-p 322 (402)
T PRK06107 252 YAAGPA------DLIAAINKLQSQSS-SCPSSISQAAAAAALNG-DQSFVTESVAVYKQRRDYALALLNAIPGLSCLV-P 322 (402)
T ss_pred eeecCH------HHHHHHHHHHHhcc-cCCChHHHHHHHHHhcC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCCcccC-C
Confidence 999887 57666655332111 12233333333334432 12234666777888899999999886 777654 2
Q ss_pred CcceeEEEEeC
Q 014724 402 SDNHLVLVDLR 412 (419)
Q Consensus 402 t~~hlv~vd~~ 412 (419)
..+.++|++++
T Consensus 323 ~gg~~~~~~~~ 333 (402)
T PRK06107 323 DGAFYLYVNCA 333 (402)
T ss_pred CcceEEeeecc
Confidence 44667898885
No 118
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.84 E-value=1.4e-19 Score=181.45 Aligned_cols=245 Identities=20% Similarity=0.227 Sum_probs=165.9
Q ss_pred hHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHc-cCCCC
Q 014724 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPHD 193 (419)
Q Consensus 115 ~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~al-l~pGD 193 (419)
.++.++++.+.+.+.+... .| ..+.++| +.++++||.+. .+.++|||.|+++++.++ ++|||
T Consensus 4 ~~e~~~~v~~~l~s~~~~~-------~g-~~~~~fE----~~~a~~~g~~~-----~~~~~sgt~Al~~al~~l~~~~gd 66 (363)
T PF01041_consen 4 TEEEIDAVLEVLRSGWLST-------YG-PYVEEFE----KEFAEYFGVKY-----AVAVSSGTSALHLALRALGLGPGD 66 (363)
T ss_dssp HHHHHHHHHHHHHHTCCSS-------SS-HHHHHHH----HHHHHHHTSSE-----EEEESSHHHHHHHHHHHTTGGTTS
T ss_pred CHHHHHHHHHHHHhCCccC-------CC-HHHHHHH----HHHHHHhCCCe-----EEEeCChhHHHHHHHHhcCCCcCc
Confidence 3456677777776554211 02 5577888 56889999877 388899999999999998 78999
Q ss_pred EEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCCcCChHHHHH
Q 014724 194 RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQ 273 (419)
Q Consensus 194 ~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~~~dl~~I~~ 273 (419)
+|+++..++.+.. ..+...|. +++.++++++++.+|++.+++++.+ ++|+|++.+ .++...|+++|.+
T Consensus 67 eVi~p~~t~~~~~--------~ai~~~G~--~pv~~Di~~~~~~id~~~~~~~i~~-~t~ai~~~h-~~G~~~d~~~i~~ 134 (363)
T PF01041_consen 67 EVIVPAYTFPATA--------SAILWAGA--EPVFVDIDPETLNIDPEALEKAITP-KTKAILVVH-LFGNPADMDAIRA 134 (363)
T ss_dssp EEEEESSS-THHH--------HHHHHTT---EEEEE-BETTTSSB-HHHHHHHHHT-TEEEEEEE--GGGB---HHHHHH
T ss_pred eEecCCCcchHHH--------HHHHHhcc--EEEEEeccCCcCCcCHHHHHHHhcc-CccEEEEec-CCCCcccHHHHHH
Confidence 9999987665443 13345554 7888888888999999999999985 789888765 4455569999999
Q ss_pred HHHHhCCEEEEeccccccccccCCcCCCCCCCcEEEeCCC--CcCCCCCeeEEEEeCCCcchhhHHHHhhhcccCCC---
Q 014724 274 IADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTH--KSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGL--- 348 (419)
Q Consensus 274 ia~~~ga~livD~ah~~Gl~~~g~~~~~~~~~Div~~S~h--K~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~--- 348 (419)
+|+++|++||.|+||+.|....|..... ..|+.++|+| |.+....||+|+++++ ++.+++......+.
T Consensus 135 ~~~~~~i~lIeD~a~a~g~~~~g~~~G~--~gd~~~fSf~~~K~i~~geGG~v~~~~~-----~~~~~~~~~~~~g~~~~ 207 (363)
T PF01041_consen 135 IARKHGIPLIEDAAQAFGARYKGRPVGS--FGDIAIFSFHPTKIITTGEGGAVVTNDP-----ELAERARALRNHGRSRD 207 (363)
T ss_dssp HHHHTT-EEEEE-TTTTT-EETTEETTS--SSSEEEEESSTTSSS-SSS-EEEEESTH-----HHHHHHHHHTBTTEETS
T ss_pred HHHHcCCcEEEccccccCceeCCEeccC--CCCceEecCCCCCCCcCCCCeeEEecHH-----HHHHHhhhhhccCcCcc
Confidence 9999999999999999987665532221 4688888886 8888889999999986 66666543221111
Q ss_pred ----------CC-CChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEEe
Q 014724 349 ----------QG-GPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLV 398 (419)
Q Consensus 349 ----------~g-~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~ 398 (419)
.| ...++.+.| +.++.++. .+++..++.+++++++.+.|.+. ++...
T Consensus 208 ~~~~~~~~~~~g~n~rm~~~~A-Aigl~QL~--~L~~~~~~R~~~a~~y~~~L~~~~~~~~~ 266 (363)
T PF01041_consen 208 AFRRYRHELPPGYNFRMSELQA-AIGLAQLK--RLDEIIARRRENAQRYREALAGIPGIKPP 266 (363)
T ss_dssp ECSTTEESSSS--B-B-BHHHH-HHHHHHHH--THHHHHHHHHHHHHHHHHHHTTGTTEEEE
T ss_pred ccccccccccCCcccccHHHHH-HHHHHHHH--HhhhhHHHHHHHHHHHHHHHhcCCCcccc
Confidence 00 111222222 33455553 46788888899999999999986 55444
No 119
>PLN02231 alanine transaminase
Probab=99.84 E-value=4.4e-19 Score=185.69 Aligned_cols=284 Identities=14% Similarity=0.092 Sum_probs=179.1
Q ss_pred hhcccccccCCCChHHHHHHHhhhhhccC---CCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCCh-
Q 014724 102 FKSLELIASENFTSRAVMEAVGSCLTNKY---SEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG- 177 (419)
Q Consensus 102 ~~~i~L~~sen~~~~~V~eal~~~l~~~y---~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sG- 177 (419)
.+.|++.+++...|..+++...+.+.+.. ..+|.. ..| ..++.+.+.+++.+..|.+.+ + .+|++++|
T Consensus 129 p~~i~~~~~~~~fp~~~i~~a~~~l~~~~~~~~~~Y~~---s~G---~~~lReaIA~~~~~r~g~~~~-p-e~I~iT~Ga 200 (534)
T PLN02231 129 PSLLDKSETHGLFSADAIERAWQILDQIPGRATGAYSH---SQG---IKGLRDAIAAGIEARDGFPAD-P-NDIFLTDGA 200 (534)
T ss_pred CccCCCCCccccCCHHHHHHHHHHHHhcCCccccCcCC---CCC---cHHHHHHHHHHHHhccCCCCC-c-ccEEEeCCH
Confidence 34577766655556677777666665421 112332 123 346776777888777776542 2 24667777
Q ss_pred HHHHHHHHHHcc-CCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCC-CCCCCHHHHHHHhhhc-----
Q 014724 178 SPANFEVYTAIL-KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILF----- 250 (419)
Q Consensus 178 t~A~~~~~~all-~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~-~~~iD~d~Le~~l~~~----- 250 (419)
++|+..++.+++ .+||.|+++.|.|..+.. .+...|. ++++++++++ ++.+|+++|++.+++.
T Consensus 201 ~~ai~~~~~~l~~~~gd~Vli~~P~Y~~y~~--------~~~~~g~--~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~ 270 (534)
T PLN02231 201 SPAVHMMMQLLIRSEKDGILCPIPQYPLYSA--------SIALHGG--TLVPYYLDEATGWGLEISELKKQLEDARSKGI 270 (534)
T ss_pred HHHHHHHHHHhccCCCCEEEEeCCCChhHHH--------HHHHcCC--EEEEEecCcccCCCCCHHHHHHHHHHHhhcCC
Confidence 569999999998 489999999999876642 2334555 5566666643 4689999999988652
Q ss_pred CCeEEEEcCCCCCCc-----CChHHHHHHHHHhCCEEEEecccccccccc-CCcCCCC-------C--CCc---EEEeCC
Q 014724 251 RPKLIIAGASAYPRD-----FDYPRMRQIADAVGALLMMDMAHISGLVAA-SVVADPF-------K--YCD---VVTTTT 312 (419)
Q Consensus 251 ~pklIi~~~s~~p~~-----~dl~~I~~ia~~~ga~livD~ah~~Gl~~~-g~~~~~~-------~--~~D---iv~~S~ 312 (419)
++|+|++.+|+||+- ..+++|.++|++||++||+|++| ..+++. +....++ + .-+ ++++|+
T Consensus 271 ~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY-~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~ 349 (534)
T PLN02231 271 TVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVY-QENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSV 349 (534)
T ss_pred CeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccc-hhcccCCCCCcccHHHHHhhhccccCCceEEEEecc
Confidence 688888889999962 24688999999999999999994 566653 2111111 0 112 568899
Q ss_pred CCcC---CCCCeeEEEEe--CCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHh--cChHH-------HHHHHH
Q 014724 313 HKSL---RGPRGGMIFFK--KDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHA--QSPEF-------KVYQNK 378 (419)
Q Consensus 313 hK~l---~GprgG~i~~~--~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~--~~~~~-------~~~~~~ 378 (419)
||++ +|+|+||+... ++ ++.+.+....... .+++... ..+...++..- .++.+ +...+.
T Consensus 350 SK~~~g~pGlRiGy~~~~~~~~-----~l~~~l~k~~~~~-~~s~~~~-Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~ 422 (534)
T PLN02231 350 SKGYYGECGKRGGYMEVTGFTS-----DVREQIYKVASVN-LCSNISG-QILASLVMSPPKPGDESYESYMAEKDGILSS 422 (534)
T ss_pred CcccccCCccceEEEEEecCCH-----HHHHHHHHHHhhh-cCCChHH-HHHHHHHhCCCCCCcchHHHHHHHHHHHHHH
Confidence 9975 59999999763 22 5666554432211 1222222 22222223210 01122 233567
Q ss_pred HHHHHHHHHHHHHhC-CcEEecCCCcceeEEEEeC
Q 014724 379 VVSNCRALASRLVEL-GYKLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 379 v~~n~~~l~~~L~~~-G~~v~~~~t~~hlv~vd~~ 412 (419)
+.++++.+.+.|++. |+++.. ...+.++|++++
T Consensus 423 ~~~r~~~l~~~L~~~~gi~~~~-p~Ggfylw~~l~ 456 (534)
T PLN02231 423 LARRAKTLEDALNSLEGVTCNK-AEGAMYLFPRIH 456 (534)
T ss_pred HHHHHHHHHHHHhcCCCceecC-CCeeeEEecccc
Confidence 888899999999987 888765 245677886654
No 120
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.84 E-value=1.1e-18 Score=177.13 Aligned_cols=302 Identities=17% Similarity=0.132 Sum_probs=184.7
Q ss_pred ccChhHHHHHHHHHHHh---hhcccccccCC------CChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHH
Q 014724 85 EADPEVCEIITKEKERQ---FKSLELIASEN------FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQK 155 (419)
Q Consensus 85 ~~~~~~~~~~~~e~~r~---~~~i~L~~sen------~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~ 155 (419)
..|| +.+++...+... ++.++|..++. .+++.+++++.+.+......+|.. ..|. .++++.+.+
T Consensus 12 ~~~~-~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~g~---~~lr~aia~ 84 (401)
T TIGR01264 12 TVNP-IRAIVDNMKVKPNPEKPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYNGYAP---TVGA---LSAREAIAS 84 (401)
T ss_pred hhhH-HHHHHHHHHhhhhcCCCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhccCCCCCCC---CCCC---HHHHHHHHH
Confidence 3445 444444333321 34588876652 367899999887765432223422 1232 245544444
Q ss_pred HHHHHcC--CCCCCCceeEecCCh-HHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccC
Q 014724 156 RALAAFN--LDENKWGVNVQPLSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD 232 (419)
Q Consensus 156 ~la~~~g--~~~~~~~v~V~~~sG-t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~ 232 (419)
++.+ .+ ++++ +|++++| ++|+..++.+++++||+|++++|.+..+.. .+...|. ++++++++
T Consensus 85 ~~~~-~~~~~~~~----~i~~t~G~~~al~~~~~~l~~~gd~v~i~~P~y~~~~~--------~~~~~g~--~v~~~~~~ 149 (401)
T TIGR01264 85 YYHN-PDGPIEAD----DVVLCSGCSHAIEMCIAALANAGQNILVPRPGFPLYET--------LAESMGI--EVKLYNLL 149 (401)
T ss_pred HHhh-cCCCCCHH----HEEECcChHHHHHHHHHHhCCCCCEEEEeCCCChhHHH--------HHHHcCC--EEEEeecC
Confidence 4443 22 3332 3555665 679999999999999999999988755431 2234555 44444444
Q ss_pred C-CCCCCCHHHHHHHhhhcCCeEEEEcCCCCCCc--C---ChHHHHHHHHHhCCEEEEeccccccccccCCcCCCC---C
Q 014724 233 E-STGLVDYDMLEKTAILFRPKLIIAGASAYPRD--F---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K 303 (419)
Q Consensus 233 ~-~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~~--~---dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~---~ 303 (419)
. +++.+|++.+++.+.+ ++++|++++|+||+- . ++++|.++|+++|++|++|+++ .++.+.+....++ .
T Consensus 150 ~~~~~~~d~~~l~~~~~~-~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~ 227 (401)
T TIGR01264 150 PDKSWEIDLKQLESLIDE-KTAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIY-GDMVFSGATFEPLASLS 227 (401)
T ss_pred CccCCCCCHHHHHHHhcc-CceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhh-hhhccCCcccccHHHcC
Confidence 3 2578999999998864 689999999999862 2 4788999999999999999994 5665543211122 1
Q ss_pred -CC-cEEEeCCCCcC--CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHH
Q 014724 304 -YC-DVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKV 379 (419)
Q Consensus 304 -~~-Div~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v 379 (419)
.. -|+++|+||+| +|.|.||+++++......++.+.+....... . +++.....++..++.......+++..+++
T Consensus 228 ~~~~vi~~~SfSK~~~~~GlRiG~iv~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~q~a~~~~l~~~~~~~l~~~~~~~ 305 (401)
T TIGR01264 228 STVPILSCGGLAKRWLVPGWRLGWIIIHDRRGILRDIRDGLVKLSQRI-L-GPCTIVQGALPSILLRTPQEYFDGTLSVL 305 (401)
T ss_pred CCCcEEEEccCcccCCCccceEEEEEecCcchhHHHHHHHHHHHhhcc-C-CCCcHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 11 27799999974 8899999998752100002333333221111 1 11222233333344432123456777888
Q ss_pred HHHHHHHHHHHHhC-CcEEecCCCcceeEEEEeCC
Q 014724 380 VSNCRALASRLVEL-GYKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 380 ~~n~~~l~~~L~~~-G~~v~~~~t~~hlv~vd~~~ 413 (419)
.++++.+.+.|++. |+.+.. .....++|++++.
T Consensus 306 ~~~r~~l~~~L~~~~~~~~~~-p~~g~f~~~~~~~ 339 (401)
T TIGR01264 306 ESNAMLCYGALAAVPGLRPVM-PSGAMYMMVGIEM 339 (401)
T ss_pred HHHHHHHHHHHHhCCCCcccC-CCeeeEEEEEecc
Confidence 88899999999987 776443 2456789999753
No 121
>PRK08175 aminotransferase; Validated
Probab=99.84 E-value=1.1e-18 Score=176.96 Aligned_cols=283 Identities=16% Similarity=0.107 Sum_probs=179.3
Q ss_pred hhcccccccC-C-CChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChH-
Q 014724 102 FKSLELIASE-N-FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS- 178 (419)
Q Consensus 102 ~~~i~L~~se-n-~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt- 178 (419)
.+.++|..+. + ..++.+.+++.+.+.+....+|+. ..|. .++++.+.+++.+.+|...+ ...++++++|+
T Consensus 29 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~---~~lr~aia~~~~~~~g~~~~-~~~~i~~t~G~~ 101 (395)
T PRK08175 29 EDIIDFSMGNPDGPTPPHIVEKLCEVAQRPDTHGYST---SRGI---PRLRRAISRWYQDRYDVDID-PESEAIVTIGSK 101 (395)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCcCCCCC---CCCC---HHHHHHHHHHHHHHhCCCCC-CCCcEEEccCcH
Confidence 4456776554 2 246667777776654322223432 1233 36666677777777676432 10146667775
Q ss_pred HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhh--cCCeEEE
Q 014724 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL--FRPKLII 256 (419)
Q Consensus 179 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~--~~pklIi 256 (419)
+++..++.++++|||+|++++|.|..+.. .+...|. +.+.++.+++ ..+.++++++++. .++|+|+
T Consensus 102 ~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~--------~~~~~g~--~~~~v~~~~~--~~~~~~l~~~l~~~~~~~~~v~ 169 (395)
T PRK08175 102 EGLAHLMLATLDHGDTVLVPNPSYPIHIY--------GAVIAGA--QVRSVPLVEG--VDFFNELERAIRESYPKPKMMI 169 (395)
T ss_pred HHHHHHHHHhCCCCCEEEEcCCCCcchHH--------HHHHcCC--eEEEEecccC--CCcHHHHHHHHhhccCCceEEE
Confidence 68888889999999999999998766531 1234454 4555555432 3357888888764 3689999
Q ss_pred EcCCCCCC--cCCh---HHHHHHHHHhCCEEEEeccccccccccCCcCCC---CCC-Cc--EEEeCCCCcC--CCCCeeE
Q 014724 257 AGASAYPR--DFDY---PRMRQIADAVGALLMMDMAHISGLVAASVVADP---FKY-CD--VVTTTTHKSL--RGPRGGM 323 (419)
Q Consensus 257 ~~~s~~p~--~~dl---~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~---~~~-~D--iv~~S~hK~l--~GprgG~ 323 (419)
+++|+||+ ..+. ++|.++|+++|++||+|+++ ..+.+.+....+ ++. .| ++++|++|+| +|.|.||
T Consensus 170 i~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y-~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~ 248 (395)
T PRK08175 170 LGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAY-ADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGF 248 (395)
T ss_pred EeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecch-HhhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhhee
Confidence 98889985 3444 78999999999999999995 455543321111 121 23 6789999997 7789999
Q ss_pred EEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCc
Q 014724 324 IFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSD 403 (419)
Q Consensus 324 i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~ 403 (419)
++.++ ++.+.+.........+..... ..+...++... ....+...+++.++++++.+.|++.|+.+.. ...
T Consensus 249 ~~~~~------~l~~~~~~~~~~~~~~~~~~~-q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~-p~~ 319 (395)
T PRK08175 249 MVGNP------ELVSALARIKSYHDYGTFTPL-QVAAIAALEGD-QQCVRDIAEQYKRRRDVLVKGLHEAGWMVEM-PKA 319 (395)
T ss_pred eeCCH------HHHHHHHHHHhhcccCCCcHH-HHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHcCCcccC-CCE
Confidence 99877 566665543211111222222 22223334321 2235666777888899999999998987653 245
Q ss_pred ceeEEEEeCC
Q 014724 404 NHLVLVDLRP 413 (419)
Q Consensus 404 ~hlv~vd~~~ 413 (419)
..++|+++..
T Consensus 320 g~~i~i~l~~ 329 (395)
T PRK08175 320 SMYVWAKIPE 329 (395)
T ss_pred EEEEEEECCc
Confidence 6789999864
No 122
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.84 E-value=5.2e-19 Score=179.11 Aligned_cols=280 Identities=16% Similarity=0.108 Sum_probs=178.7
Q ss_pred hhcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCC-CCCceeEecCCh-
Q 014724 102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDE-NKWGVNVQPLSG- 177 (419)
Q Consensus 102 ~~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~-~~~~v~V~~~sG- 177 (419)
...|+|..+++. +++.+++++.+.+.. ...|+. ..|. .++.+.+.+++.+.+|.+. -++..+|++++|
T Consensus 28 ~~~i~l~~~~p~~~~~~~~~~a~~~~~~~--~~~Y~~---~~G~---~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga 99 (393)
T TIGR03538 28 KPPIALSIGEPKHPTPAFVLEALRENLHG--LSTYPT---TKGL---PELRQAIARWLERRFDLPTGVDPERHVLPVNGT 99 (393)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHhhc--cCCCCC---CCCC---HHHHHHHHHHHHHhhCCcccCCCCceEEECCCc
Confidence 467888877743 678899999876542 123432 1232 3566666677777766541 011114667777
Q ss_pred HHHHHHHHHHccCCCCE--EEEeCCCCCccccCccccccccccccccccEEEecccCCC-CCCCCHHHHHHHhhhcCCeE
Q 014724 178 SPANFEVYTAILKPHDR--IMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKL 254 (419)
Q Consensus 178 t~A~~~~~~all~pGD~--Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~-~~~iD~d~Le~~l~~~~pkl 254 (419)
++|+..++.++++|||. |++++|.+.++.. .+...|. ++++++++++ ++.+|++++++.+.+ ++|+
T Consensus 100 ~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~~~~-~~k~ 168 (393)
T TIGR03538 100 REALFAFAQAVINPGQAPLVVMPNPFYQIYEG--------AALLAGA--EPYFLNCTAENGFLPDFDAVPESVWR-RCQL 168 (393)
T ss_pred HHHHHHHHHHHcCCCCcceEEecCCCCcchHH--------HHHhcCC--eEEEeeccccCCCCCCHHHHHHHHhh-cceE
Confidence 56999999999999996 8888887765431 1234555 4555555533 367999999998865 7899
Q ss_pred EEEcCCCCCC--cC---ChHHHHHHHHHhCCEEEEeccccccccccCC--cCCCC---C--C-----CcEEEeCCCCc--
Q 014724 255 IIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASV--VADPF---K--Y-----CDVVTTTTHKS-- 315 (419)
Q Consensus 255 Ii~~~s~~p~--~~---dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~--~~~~~---~--~-----~Div~~S~hK~-- 315 (419)
|++++|+||+ .. .+++|.++|++||++||+|+++ ..+.+.+. .++.+ . + --+++.|++|.
T Consensus 169 i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~ 247 (393)
T TIGR03538 169 LFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECY-SELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSN 247 (393)
T ss_pred EEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcch-hhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcC
Confidence 9999999996 23 3788999999999999999995 44443321 11111 0 1 12789999996
Q ss_pred CCCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCc
Q 014724 316 LRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGY 395 (419)
Q Consensus 316 l~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~ 395 (419)
++|.|.||+++++ ++.+++.........+.+.....++ ..++.. .+.+++..+++.++++.+.+.|++. +
T Consensus 248 ~~GlRvG~~i~~~------~l~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~--~~~~~~~~~~~~~~~~~~~~~L~~~-~ 317 (393)
T TIGR03538 248 LPGLRSGFVAGDA------EILKAFLRYRTYHGCAMPIPTQLAS-IAAWND--EQHVRENRALYREKFAAVLEILGQV-L 317 (393)
T ss_pred CcccceEEEecCH------HHHHHHHHHHHhhccCcCHHHHHHH-HHHhcC--hHHHHHHHHHHHHHHHHHHHHHHhh-C
Confidence 4899999999887 5666554432211111222222222 223321 1234666777888888899998875 3
Q ss_pred EEecCCCcceeEEEEeC
Q 014724 396 KLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 396 ~v~~~~t~~hlv~vd~~ 412 (419)
.+.. .....++|+++.
T Consensus 318 ~~~~-p~gg~f~~~~~~ 333 (393)
T TIGR03538 318 DLEL-PDAGFYLWPKVP 333 (393)
T ss_pred cccC-CCeeEEEEEECC
Confidence 3322 345678999985
No 123
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.84 E-value=1.8e-18 Score=175.74 Aligned_cols=289 Identities=18% Similarity=0.112 Sum_probs=177.5
Q ss_pred hhcccccccCC------CChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecC
Q 014724 102 FKSLELIASEN------FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPL 175 (419)
Q Consensus 102 ~~~i~L~~sen------~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~ 175 (419)
.+.|+|..+.. ++++.+++++.+.+......+|+. ..|. .++++.+++++...++.+.+. .+|+++
T Consensus 31 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~---~~g~---~~lr~~ia~~l~~~~~~~~~~--~~ii~t 102 (403)
T TIGR01265 31 KPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNGYAP---SVGA---LAAREAVAEYLSSDLPGKLTA--DDVVLT 102 (403)
T ss_pred CCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCCCCCC---CCCC---HHHHHHHHHHHHhhcCCCCCH--HHEEEe
Confidence 45678876642 367999999988775443223422 1222 244444444443333332211 135555
Q ss_pred Ch-HHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCC-CCCCCCHHHHHHHhhhcCCe
Q 014724 176 SG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPK 253 (419)
Q Consensus 176 sG-t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~-~~~~iD~d~Le~~l~~~~pk 253 (419)
+| ++|+..++.++.++||+|++++|++..+.. .+...|. +++.+++++ +++.+|++.+++.+.. +++
T Consensus 103 ~G~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~ 171 (403)
T TIGR01265 103 SGCSQAIEICIEALANPGANILVPRPGFPLYDT--------RAAFSGL--EVRLYDLLPEKDWEIDLDGLEALADE-KTV 171 (403)
T ss_pred cChHHHHHHHHHHhCCCCCEEEEeCCCchhHHH--------HHHHcCC--EEEEecCCcccCCccCHHHHHHHhCc-Ccc
Confidence 55 789999999999999999999998754321 1234454 444444433 3568999999998864 688
Q ss_pred EEEEcCCCCCC--cC---ChHHHHHHHHHhCCEEEEeccccccccccCCcCCCC---C-CCc-EEEeCCCCcC--CCCCe
Q 014724 254 LIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K-YCD-VVTTTTHKSL--RGPRG 321 (419)
Q Consensus 254 lIi~~~s~~p~--~~---dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~---~-~~D-iv~~S~hK~l--~Gprg 321 (419)
++++++|+||+ .. ++++|.++|+++|+++|+|+++ ..+.+.+....++ . ... ++++|++|+| +|.|.
T Consensus 172 ~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRi 250 (403)
T TIGR01265 172 AIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIY-GHMVFGDAPFIPMASFASIVPVLSLGGISKRWVVPGWRL 250 (403)
T ss_pred EEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccc-cccccCCCCccchhhhccCCcEEEEeecccccCCCcceE
Confidence 99998899985 33 4789999999999999999994 5555443211112 1 222 6789999984 88899
Q ss_pred eEEEEeCC-CcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEEec
Q 014724 322 GMIFFKKD-PVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVS 399 (419)
Q Consensus 322 G~i~~~~~-~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~~ 399 (419)
||++..+. .....++.+.+....... . +++.....++..++.......+++..+++.++++.+.+.|++. |+++..
T Consensus 251 G~~v~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 328 (403)
T TIGR01265 251 GWIIIHDPHGIFRDTVLQGLKNLLQRI-L-GPATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKDIPGLVCPK 328 (403)
T ss_pred EEEEEeCchhhhHHHHHHHHHHHhhhh-c-CCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCCceecC
Confidence 99998542 100001333333221111 1 2222233344445543222334667788888999999999887 776443
Q ss_pred CCCcceeEEEEeCC
Q 014724 400 GGSDNHLVLVDLRP 413 (419)
Q Consensus 400 ~~t~~hlv~vd~~~ 413 (419)
.....++|+++..
T Consensus 329 -p~~g~f~~~~~~~ 341 (403)
T TIGR01265 329 -PEGAMYLMVKLEL 341 (403)
T ss_pred -CCceeEEEEeccc
Confidence 3456789998853
No 124
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.84 E-value=1.7e-19 Score=181.82 Aligned_cols=213 Identities=22% Similarity=0.217 Sum_probs=152.5
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccc
Q 014724 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (419)
Q Consensus 142 g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g 221 (419)
|++..+.|| +.++++.|.+. .+++.||++|+.+++.+++++||+|+++++.|++.+.... . ....
T Consensus 51 ~npt~~~Le----~~lA~leg~e~-----ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~-----~-~~~~ 115 (388)
T PRK08861 51 GNPNRGLLE----QTLSELESGKG-----AVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFN-----T-RANK 115 (388)
T ss_pred CCchHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHH-----H-HHhc
Confidence 445567777 56788888643 2666777899999999999999999999998876432110 0 0111
Q ss_pred cccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcC
Q 014724 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (419)
Q Consensus 222 ~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~ 299 (419)
.++++..++ ..|++++++.+.+ ++|+|++++|+||+ ..|+++|.++|+++|+++++|+++..++. .
T Consensus 116 ~gi~v~~vd------~~d~e~l~~~i~~-~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvDea~~~~~~-----~ 183 (388)
T PRK08861 116 GDFKVQFVD------QSDAAALDAALAK-KPKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVDNTFLTPVL-----Q 183 (388)
T ss_pred CCeEEEEEC------CCCHHHHHHhcCc-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcccccc-----C
Confidence 223544432 2589999998875 89999999999984 67999999999999999999999876643 3
Q ss_pred CCCC-CCcEEEeCCCCcCCCCC---eeEEEEeCCCcchhhHHHHhhhccc-CCCCCCChHHHHHHHHHHHHHhcChHHHH
Q 014724 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVF-PGLQGGPHNHTIGGLAVCLKHAQSPEFKV 374 (419)
Q Consensus 300 ~~~~-~~Div~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~-~~~~g~p~~~~iaala~al~~~~~~~~~~ 374 (419)
.|++ ++|++++|+||++.|+. ||+++++++ ++.+++..... .+..-+| ..+. ..++-+. .+.-
T Consensus 184 ~pl~~GaDivv~S~tK~l~G~~d~~gG~i~~~~~-----~~~~~~~~~~~~~G~~~~p----~~a~-l~~rgl~--Tl~l 251 (388)
T PRK08861 184 KPLELGADFVIHSTTKYINGHSDVIGGVLITKTK-----EHAEELAWWGNCIGATGTP----FDSY-MTLRGIR--TLGA 251 (388)
T ss_pred CCcccCCCEEEeecceeccCCCcceeEEEEecHH-----HHHHHHHHHHhccCCCCCh----HHHH-HHHhcCC--CHHH
Confidence 4566 89999999999998874 688888764 56565543221 1221122 2221 2333332 3667
Q ss_pred HHHHHHHHHHHHHHHHHhC
Q 014724 375 YQNKVVSNCRALASRLVEL 393 (419)
Q Consensus 375 ~~~~v~~n~~~l~~~L~~~ 393 (419)
+.+++.+|+..++++|+++
T Consensus 252 R~~~~~~~a~~~a~~L~~~ 270 (388)
T PRK08861 252 RMRVHEESAQQILAYLQTQ 270 (388)
T ss_pred HHHHHHHHHHHHHHHHHhC
Confidence 8899999999999999986
No 125
>PLN02822 serine palmitoyltransferase
Probab=99.84 E-value=6.4e-19 Score=182.69 Aligned_cols=275 Identities=15% Similarity=0.151 Sum_probs=181.9
Q ss_pred hhcccccccC--CC-ChHHHHHHHhhhhhccCCCCCCCCCCCCc-hhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCCh
Q 014724 102 FKSLELIASE--NF-TSRAVMEAVGSCLTNKYSEGLPGKRYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG 177 (419)
Q Consensus 102 ~~~i~L~~se--n~-~~~~V~eal~~~l~~~y~~g~p~~r~~~g-~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sG 177 (419)
++.|+|..+. ++ .+|+|++++.+.+. +|..|++++|...| .+...++| ++++++++.+. .|++++|
T Consensus 109 ~~~id~~s~~~lgl~~~~~i~ea~~~al~-~~G~g~~g~r~~yg~~~~~~~Le----e~La~~~~~~~-----~i~~s~G 178 (481)
T PLN02822 109 KDVVNFASANYLGLIGNEKIKESCTSALE-KYGVGSCGPRGFYGTIDVHLDCE----TKIAKFLGTPD-----SILYSYG 178 (481)
T ss_pred ceEEEeECCCcCCCCCCHHHHHHHHHHHH-HhCCCCcccCccccCHHHHHHHH----HHHHHHhCCCC-----EEEECCH
Confidence 3457775442 12 48999999999885 56667777655333 33334444 77889998764 3777888
Q ss_pred HHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhh--------
Q 014724 178 SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL-------- 249 (419)
Q Consensus 178 t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~-------- 249 (419)
..++..++.+++++||.|++....|.++. ..+.+.+. +++.++++ |.+.++..+++
T Consensus 179 ~~a~~sai~a~~~~gd~Ii~d~~~H~s~~--------~~~~ls~~--~~~~~~~n------d~~~l~~~l~~~~~~~~~~ 242 (481)
T PLN02822 179 LSTIFSVIPAFCKKGDIIVADEGVHWGIQ--------NGLYLSRS--TIVYFKHN------DMESLRNTLEKLTAENKRK 242 (481)
T ss_pred HHHHHHHHHHhCCCCCEEEEeCCccHHHH--------HHHHHcCC--eEEEECCC------CHHHHHHHHHHHhhhhccc
Confidence 77899999999999999998766554432 12334444 44555443 34445444431
Q ss_pred cCC-eEEEEcCCC--CCCcCChHHHHHHHHHhCCEEEEecccccccccc---CCcC-CCC--CCCcEEEeCCCCcCCCCC
Q 014724 250 FRP-KLIIAGASA--YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAA---SVVA-DPF--KYCDVVTTTTHKSLRGPR 320 (419)
Q Consensus 250 ~~p-klIi~~~s~--~p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~---g~~~-~~~--~~~Div~~S~hK~l~Gpr 320 (419)
.++ ++|+++.+. .+...|+++|+++|++||++||+|++|..|..+. |... ..+ +..|++++|++|+| |..
T Consensus 243 ~~~~~~Ivve~i~~~~G~i~~L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKal-g~~ 321 (481)
T PLN02822 243 KKLRRYIVVEAIYQNSGQIAPLDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHAL-ATE 321 (481)
T ss_pred CCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhh-hhC
Confidence 124 678886543 4567889999999999999999999998776532 1111 112 25789999999998 567
Q ss_pred eeEEEEeCCCcchhhHHHHhhhcccCCCCCC--ChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEE
Q 014724 321 GGMIFFKKDPVLGVELESAINNAVFPGLQGG--PHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKL 397 (419)
Q Consensus 321 gG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~--p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v 397 (419)
|||+++++ ++.+.+......++.++ |.....+++ .+++.+. +..+..+++++++++|.+.|++. |+++
T Consensus 322 GG~i~g~~------~ii~~~~~~~~~~~fsa~lPp~~~~Aa~-~aL~~l~--~~~~~~~~l~~~~~~l~~~L~~~~g~~~ 392 (481)
T PLN02822 322 GGFCTGSA------RVVDHQRLSSSGYVFSASLPPYLASAAI-TAIDVLE--DNPSVLAKLKENIALLHKGLSDIPGLSI 392 (481)
T ss_pred CeEEEcCH------HHHHHHHhcCCceeeccccCHHHHHHHH-HHHHHHH--hCHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 79999887 56666553332333332 233333333 3665543 23567788999999999999986 8877
Q ss_pred ecCCCcceeEEEEeCC
Q 014724 398 VSGGSDNHLVLVDLRP 413 (419)
Q Consensus 398 ~~~~t~~hlv~vd~~~ 413 (419)
.. ...+.+++++++.
T Consensus 393 ~~-~~~spi~~l~l~~ 407 (481)
T PLN02822 393 GS-NTLSPIVFLHLEK 407 (481)
T ss_pred CC-CCCCCEEEEEeCC
Confidence 53 3567888888854
No 126
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.84 E-value=4e-19 Score=178.39 Aligned_cols=274 Identities=18% Similarity=0.171 Sum_probs=182.3
Q ss_pred cccccccCCC--ChHHHHHHHhhhhhcc--CCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChH-
Q 014724 104 SLELIASENF--TSRAVMEAVGSCLTNK--YSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS- 178 (419)
Q Consensus 104 ~i~L~~sen~--~~~~V~eal~~~l~~~--y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt- 178 (419)
.|+|..++++ +++.+++++.+.+... ...+||. .| ...+++.+.+++.+.+|.+.+ . .+|++++|+
T Consensus 28 ~i~l~~~~~~~~~~~~~~~al~~~l~~~~~~~~~Y~~----~g---~~~lr~aia~~~~~~~~~~~~-~-~~I~it~G~~ 98 (368)
T PRK03317 28 PVRLNTNENPYPPSPALVADIAEAVAEAAAGLNRYPD----RD---AVALRADLAAYLTAQTGVGLT-V-ENVWAANGSN 98 (368)
T ss_pred eeEecCCCCCCCCCHHHHHHHHHHHhhhhhhhccCCC----Cc---hHHHHHHHHHHhhhhccCCCC-h-hhEEECCCHH
Confidence 4778877754 6889999998775421 1123442 12 235666667777776665432 1 257778875
Q ss_pred HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEc
Q 014724 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG 258 (419)
Q Consensus 179 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~ 258 (419)
+++..++.++++|||.|++..|.|..+.. .+...| .+.++++.+ +++.+|++++++.+.+.++|+|+++
T Consensus 99 ~~l~~~~~~~~~~gd~v~v~~P~y~~~~~--------~~~~~g--~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~~i~l~ 167 (368)
T PRK03317 99 EILQQLLQAFGGPGRTALGFVPSYSMHPI--------IARGTH--TEWVEGPRA-ADFTLDVDAAVAAIAEHRPDVVFLT 167 (368)
T ss_pred HHHHHHHHHhcCCCCEEEEeCCChHHHHH--------HHHhcC--CeeEEcccC-CCCCCCHHHHHHHHhccCCCEEEEe
Confidence 69999999999999999999998766531 122334 355565443 3578999999999876678999999
Q ss_pred CCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCC---C-CCc-EEEeCCCCcC--CCCCeeEEEEeCC
Q 014724 259 ASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K-YCD-VVTTTTHKSL--RGPRGGMIFFKKD 329 (419)
Q Consensus 259 ~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~---~-~~D-iv~~S~hK~l--~GprgG~i~~~~~ 329 (419)
+|+||+ ..+.+++.++++.++++||+|++|. ++...+. +..+ + +.+ +++.|++|+| +|.|.|++++++
T Consensus 168 ~p~NPtG~~~~~~~l~~l~~~~~~~lI~DE~y~-~~~~~~~-~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~~- 244 (368)
T PRK03317 168 SPNNPTGTALPLDDVEAILDAAPGIVVVDEAYA-EFRRSGT-PSALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAAP- 244 (368)
T ss_pred CCCCCCCCCCCHHHHHHHHHHCCceEEEeCCch-hhcccCC-cCHHHHHHhCCCEEEEEechhhhccchhhhhhhhCCH-
Confidence 999984 6788999999999999999999964 4433321 1111 1 223 6789999987 588999999877
Q ss_pred CcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeEEE
Q 014724 330 PVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLV 409 (419)
Q Consensus 330 ~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~v 409 (419)
++.+.+.....++ +.+. ...++...++... +.+.+..+++.++++.+.+.|++.|+++..+ ..+.++|.
T Consensus 245 -----~~~~~l~~~~~~~--~~s~-~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~ 313 (368)
T PRK03317 245 -----AVVDALRLVRLPY--HLSA-VTQAAARAALRHA--DELLASVAALRAERDRVVAWLRELGLRVAPS-DANFVLFG 313 (368)
T ss_pred -----HHHHHHHhcCCCC--CCCH-HHHHHHHHHhhCH--HHHHHHHHHHHHHHHHHHHHHHHCCCEeCCC-CCcEEEEe
Confidence 6777766543222 1222 2222323344332 2345556677888889999999999887643 23344444
Q ss_pred Ee
Q 014724 410 DL 411 (419)
Q Consensus 410 d~ 411 (419)
++
T Consensus 314 ~~ 315 (368)
T PRK03317 314 RF 315 (368)
T ss_pred cc
Confidence 54
No 127
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.84 E-value=4e-19 Score=176.83 Aligned_cols=266 Identities=21% Similarity=0.231 Sum_probs=185.4
Q ss_pred hcccccccCCCC--hHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcC-CCCCCCceeEecCChH-
Q 014724 103 KSLELIASENFT--SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN-LDENKWGVNVQPLSGS- 178 (419)
Q Consensus 103 ~~i~L~~sen~~--~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g-~~~~~~~v~V~~~sGt- 178 (419)
..+.|.++||+. |+.+++++...+.. .+.||.. ...+++ +.+++++| .+.+ +|.+++|+
T Consensus 23 ~~i~LssNenP~gp~~~~~~~~~~~~~~--~~rYPd~-------~~~~l~----~a~a~~~~~~~~~----~V~~gnGsd 85 (356)
T COG0079 23 GIIKLSSNENPYGPPPKVIEAIRAALDK--LNRYPDP-------DYRELR----AALAEYYGVVDPE----NVLVGNGSD 85 (356)
T ss_pred cceeecCCCCCCCCCHHHHHHHHHHHHh--hccCCCC-------cHHHHH----HHHHHHhCCCCcc----eEEEcCChH
Confidence 458899999874 58888888776541 1234432 112333 56788888 5553 58888886
Q ss_pred HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEc
Q 014724 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG 258 (419)
Q Consensus 179 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~ 258 (419)
+.+..++.+++.|||+|+++.|+++.|-. .+...|. +++.++.+ + +.+|+|.+.+.+.+ ++++|+++
T Consensus 86 e~i~~l~~~~~~~gd~vl~~~Ptf~~Y~~--------~a~~~g~--~~~~v~~~-~-~~~d~~~~~~~~~~-~~~lv~i~ 152 (356)
T COG0079 86 ELIELLVRAFVEPGDTVLIPEPTFSMYEI--------AAQLAGA--EVVKVPLK-E-FRLDLDAILAAIRD-KTKLVFLC 152 (356)
T ss_pred HHHHHHHHHhhcCCCEEEEcCCChHHHHH--------HHHhcCC--eEEEeccc-c-cccCHHHHHHhhhc-CCCEEEEe
Confidence 58889999999999999999998876532 2234565 44444444 2 88999999999876 89999999
Q ss_pred CCCCCC--cCChHHHHHHHHHh--CCEEEEeccccccccccCCcCCCCCCCc--EEEeCCCCcC--CCCCeeEEEEeCCC
Q 014724 259 ASAYPR--DFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFKYCD--VVTTTTHKSL--RGPRGGMIFFKKDP 330 (419)
Q Consensus 259 ~s~~p~--~~dl~~I~~ia~~~--ga~livD~ah~~Gl~~~g~~~~~~~~~D--iv~~S~hK~l--~GprgG~i~~~~~~ 330 (419)
+||||+ ..+.++|.++++.. +.+|++|+|+ ......... ..+.+.+ +++.|++|.| +|.|.||++++.
T Consensus 153 nPNNPTG~~~~~~~l~~l~~~~~~~~~vVvDEAY-~eF~~~~~~-~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~~-- 228 (356)
T COG0079 153 NPNNPTGTLLPREELRALLEALPEGGLVVIDEAY-IEFSPESSL-ELLKYPPNLIVLRTFSKAFGLAGLRVGYAIANP-- 228 (356)
T ss_pred CCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCch-hhcCCchhh-hhccCCCCEEEEEecHHhhhcchhceeeccCCH--
Confidence 999996 45666777776654 8899999994 343321110 1111223 8899999975 899999988887
Q ss_pred cchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcE-EecCCCcceeEEE
Q 014724 331 VLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYK-LVSGGSDNHLVLV 409 (419)
Q Consensus 331 ~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~-v~~~~t~~hlv~v 409 (419)
++.+.+++...|+..+++ ..++...++... +..++..+++.+.++++.+.|+..|+. +++ ++.+++++
T Consensus 229 ----~~i~~l~~vr~p~~v~~~---a~~aa~aal~~~--~~~~~~~~~~~~~r~rl~~~l~~~~~~~v~p--S~aNFvlv 297 (356)
T COG0079 229 ----ELIAALNKVRPPFNVSSP---ALAAAIAALRDA--DYLEESVERIREERERLYAALKALGLFGVFP--SQANFVLV 297 (356)
T ss_pred ----HHHHHHHHhcCCCCCCHH---HHHHHHHHcccH--HHHHHHHHHHHHHHHHHHHHHHhCCCCeecC--CCCcEEEE
Confidence 788888887766633221 122212233322 345788899999999999999999855 665 45889999
Q ss_pred EeCC
Q 014724 410 DLRP 413 (419)
Q Consensus 410 d~~~ 413 (419)
++..
T Consensus 298 ~~~~ 301 (356)
T COG0079 298 RVPD 301 (356)
T ss_pred ECCC
Confidence 9853
No 128
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.84 E-value=1.5e-18 Score=174.05 Aligned_cols=268 Identities=17% Similarity=0.158 Sum_probs=173.9
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHcc----
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all---- 189 (419)
..+.+.+++...+... .+.++ .+.|. ..+++.+++++++++|+++++ .+++++|++++..++.++.
T Consensus 32 ~~~~~~~a~~~~~~~~--~~~~~--~~~~~---~~~~~~~~~~la~~~g~~~~~---~~~~~g~~~~~~~~~~~~~~~~~ 101 (373)
T TIGR03812 32 PHPIAVKAYDMFIETN--LGDPG--LFPGT---KKIEEEVVGSLGNLLHLPDAY---GYIVSGGTEANIQAVRAAKNLAR 101 (373)
T ss_pred chHHHHHHHHHHhhcC--CCCcc--cCccH---HHHHHHHHHHHHHHhCCCCCC---eEEeccHHHHHHHHHHHHHHHHh
Confidence 4556677776665332 23333 23332 245566789999999998641 2556667888887776653
Q ss_pred --CCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCC-eEEEEcCCCCC--C
Q 014724 190 --KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRP-KLIIAGASAYP--R 264 (419)
Q Consensus 190 --~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~p-klIi~~~s~~p--~ 264 (419)
++||+|++++++|.++. +.+...|..+.. ++++ +++.+|++++++.+++ ++ +++++. ++++ .
T Consensus 102 ~~~~g~~vl~~~~~h~~~~--------~~~~~~G~~~~~--v~~~-~~~~~d~~~l~~~l~~-~~~~vv~~~-~~~~tG~ 168 (373)
T TIGR03812 102 EEKRTPNIIVPESAHFSFE--------KAAEMLGLELRY--APLD-EDYTVDVKDVEDLIDD-NTIGIVGIA-GTTELGQ 168 (373)
T ss_pred ccCCCcEEEECCcchHHHH--------HHHHHcCCeEEE--EeeC-CCCCcCHHHHHHHHhh-CcEEEEEEC-CCCCCCc
Confidence 47899999988765532 123445654444 4444 3678999999999875 45 445554 3444 5
Q ss_pred cCChHHHHHHHHHhCCEEEEeccccccccc---cCC--cCCCC--CCCcEEEeCCCCcCCCC-CeeEEEEeCCCcchhhH
Q 014724 265 DFDYPRMRQIADAVGALLMMDMAHISGLVA---ASV--VADPF--KYCDVVTTTTHKSLRGP-RGGMIFFKKDPVLGVEL 336 (419)
Q Consensus 265 ~~dl~~I~~ia~~~ga~livD~ah~~Gl~~---~g~--~~~~~--~~~Div~~S~hK~l~Gp-rgG~i~~~~~~~~~~~l 336 (419)
..|+++|.++|+++|+++++|++|..+... .+. ....+ .++|++++|+||++.+| ++|+++..++ ++
T Consensus 169 ~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~~~~~G~~~~~~~-----~~ 243 (373)
T TIGR03812 169 IDDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLSPIPAGGILFRSK-----SY 243 (373)
T ss_pred cCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCCCcCCceEEEEeCH-----HH
Confidence 679999999999999999999998654321 011 01122 27899999999975444 4454444332 45
Q ss_pred HHHhhhcccCCC--------CCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeEE
Q 014724 337 ESAINNAVFPGL--------QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVL 408 (419)
Q Consensus 337 ~~~i~~~~~~~~--------~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~ 408 (419)
.+.+... .++. +|+++...++++..+++.+...++++..+++.+++++|++.|++.|+..+.. ...+++.
T Consensus 244 ~~~l~~~-~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~v~ 321 (373)
T TIGR03812 244 LKYLSVD-APYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKKIGFEPVIE-PVLNIVA 321 (373)
T ss_pred Hhhhccc-CcccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEcC-CCceEEE
Confidence 5544321 1211 1345455566666778776656678889999999999999999999865432 4567777
Q ss_pred EEe
Q 014724 409 VDL 411 (419)
Q Consensus 409 vd~ 411 (419)
+.+
T Consensus 322 ~~~ 324 (373)
T TIGR03812 322 FEV 324 (373)
T ss_pred EEe
Confidence 765
No 129
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.84 E-value=3.1e-19 Score=184.61 Aligned_cols=281 Identities=18% Similarity=0.128 Sum_probs=179.4
Q ss_pred hcccccccCCCChHHHHHHHhhhhhc----cC--------CCCCCCCCCCCchhHHHHHHHHHHHHHHHHcC----CCCC
Q 014724 103 KSLELIASENFTSRAVMEAVGSCLTN----KY--------SEGLPGKRYYGGNEYIDELETLCQKRALAAFN----LDEN 166 (419)
Q Consensus 103 ~~i~L~~sen~~~~~V~eal~~~l~~----~y--------~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g----~~~~ 166 (419)
..|+|..+||..+..+++.......+ .+ ...|+. +.|. .+|.+.+.+++.+.+| ++++
T Consensus 39 g~i~L~~~En~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~---~~G~---~~LR~aiA~~l~~~~~~~~~v~~~ 112 (468)
T PLN02450 39 GIIQMGLAENQLSFDLIESWLAKNPDAAGLKRNGQSIFRELALFQD---YHGL---PAFKNALAEFMSEIRGNKVTFDPN 112 (468)
T ss_pred eeEEeehhHhHhhHHHHHHHHHhCchhhhcccccccchhhhhcCCC---CCCh---HHHHHHHHHHHHHhhCCCCCcChH
Confidence 35899999997655555544332211 00 001222 2333 3576677777777666 3442
Q ss_pred CCceeEecCChH-HHHHHHHHHccCCCCEEEEeCCCCCccccCcccccccccc-ccccccEEEecccCC-CCCCCCHHHH
Q 014724 167 KWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVS-GTSIYFESMPYRLDE-STGLVDYDML 243 (419)
Q Consensus 167 ~~~v~V~~~sGt-~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~-~~g~~~~~v~~~~~~-~~~~iD~d~L 243 (419)
+|++++|+ +++..++.++++|||.|++++|.|.++.. .+. ..|. ++++++.++ +++.+|++++
T Consensus 113 ----~Iiit~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~--------~~~~~~g~--~~v~v~~~~~~~~~~~~~~l 178 (468)
T PLN02450 113 ----KLVLTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDR--------DLKWRTGV--EIVPIHCSSSNGFQITESAL 178 (468)
T ss_pred ----HeEEccChHHHHHHHHHHhCCCCCEEEECCCCCCchHH--------HHhhcCCc--EEEEEecCCccCCcCCHHHH
Confidence 47778875 69999999999999999999998876532 122 2454 566665542 4567899999
Q ss_pred HHHhhh-----cCCeEEEEcCCCCCCc--C---ChHHHHHHHHHhCCEEEEeccccccccccCC-cCCCC---C------
Q 014724 244 EKTAIL-----FRPKLIIAGASAYPRD--F---DYPRMRQIADAVGALLMMDMAHISGLVAASV-VADPF---K------ 303 (419)
Q Consensus 244 e~~l~~-----~~pklIi~~~s~~p~~--~---dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~-~~~~~---~------ 303 (419)
++.+++ .++|+|++++|+||+- . .+++|.++|++||++||+|+++ .++.+.+. ..+.+ +
T Consensus 179 e~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y-~~~~f~~~~~~s~l~~~~~~~~~~ 257 (468)
T PLN02450 179 EEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIY-SGTVFDSPGFVSVMEVLKDRKLEN 257 (468)
T ss_pred HHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccc-cccccCCCCcccHHHHhhhccccc
Confidence 988764 3789999999999962 2 4678889999999999999994 55554431 11111 0
Q ss_pred ---C-CcEEEeCCCCcC--CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhc--ChHHHHH
Q 014724 304 ---Y-CDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ--SPEFKVY 375 (419)
Q Consensus 304 ---~-~Div~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~--~~~~~~~ 375 (419)
. --+++.|+||.| +|.|.||++++++ .+.+.+.... .. ...+. ....+++.++..-. ...+++.
T Consensus 258 ~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~-----~l~~~~~~~~-~~-~~~s~-~~Q~a~~~~L~~~~~~~~~l~~~ 329 (468)
T PLN02450 258 TDVSNRVHIVYSLSKDLGLPGFRVGAIYSNDE-----MVVSAATKMS-SF-GLVSS-QTQYLLSALLSDKKFTKNYLEEN 329 (468)
T ss_pred CCCCCcEEEEEeccccCCCCCccEEEEEECCH-----HHHHHHHHHh-hc-CCCCH-HHHHHHHHHhCCchhHHHHHHHH
Confidence 1 127899999986 8999999999763 3444443322 11 11122 22223333332210 0123556
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEecCCCcceeEEEEeCC
Q 014724 376 QNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 376 ~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~vd~~~ 413 (419)
++++.+.++.+.+.|++.|+++... ..+.++|+++++
T Consensus 330 ~~~l~~rr~~l~~~L~~~gi~~~~~-~~g~flwi~l~~ 366 (468)
T PLN02450 330 QKRLKQRQKKLVSGLEAAGIKCLKS-NAGLFCWVDMRH 366 (468)
T ss_pred HHHHHHHHHHHHHHHHHcCCcccCC-CceEEEEEEchH
Confidence 7788888899999999999876542 345579999864
No 130
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.84 E-value=1.9e-19 Score=182.07 Aligned_cols=218 Identities=19% Similarity=0.176 Sum_probs=152.0
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccc
Q 014724 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (419)
Q Consensus 142 g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g 221 (419)
|++...+|| +++++++|.+. .+.++||+.|+..++.++++|||+|+++++.|++.+.... ..+...|
T Consensus 57 ~~p~~~~le----~~lA~l~g~~~-----av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~----~~~~~~G 123 (391)
T TIGR01328 57 GNPTVSNLE----GRIAFLEGTEA-----AVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALLE----HALTKFG 123 (391)
T ss_pred CCchHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHH----HHHhcCC
Confidence 445566777 57889999876 3788999999999999999999999999988776542110 1112334
Q ss_pred cccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcC
Q 014724 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (419)
Q Consensus 222 ~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~ 299 (419)
. ++..++. -|++++++.+.+ ++|+|++++|+||+ ..|+++|.++|+++|+++++|++|..+.. .
T Consensus 124 ~--~~~~vd~------~d~e~l~~~i~~-~tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD~a~a~~~~-----~ 189 (391)
T TIGR01328 124 I--QVDFINM------AIPEEVKAHIKD-NTKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVDNTFATPML-----T 189 (391)
T ss_pred e--EEEEECC------CCHHHHHHhhcc-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCchhcc-----C
Confidence 3 4444433 278999998864 78999999999884 57999999999999999999999876543 2
Q ss_pred CCCC-CCcEEEeCCCCcCCCCC---eeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHH
Q 014724 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 375 (419)
Q Consensus 300 ~~~~-~~Div~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~ 375 (419)
.++. ++|++++|++|++.|+. ||+++.++ ++.+++.........|+......+++ ++..+. .+..+
T Consensus 190 ~~~~~g~Divv~S~sK~lgg~g~~~gG~v~~~~------~li~~l~~~~~~~~~g~~l~~~~a~l--~l~~L~--tl~~r 259 (391)
T TIGR01328 190 NPVALGVDVVVHSATKYIGGHGDVVAGLICGKA------ELLQQIRMVGIKDMTGSVISPFDAWL--ILRGLK--TLNIR 259 (391)
T ss_pred CchhcCCCEEEccccccccCCCCceEEEEEcCH------HHHHHHHHHHHHhCCCCCCCcHHHHH--HHhCcC--cHHHH
Confidence 3444 89999999999997653 68888776 56555543211111121111112222 233332 34567
Q ss_pred HHHHHHHHHHHHHHHHhC-CcE
Q 014724 376 QNKVVSNCRALASRLVEL-GYK 396 (419)
Q Consensus 376 ~~~v~~n~~~l~~~L~~~-G~~ 396 (419)
.++..+|+++++++|++. +++
T Consensus 260 ~~~~~~na~~la~~L~~~p~v~ 281 (391)
T TIGR01328 260 MKRHSENAMKVAEYLKSHPAVE 281 (391)
T ss_pred HHHHHHHHHHHHHHHHhCCCcc
Confidence 888999999999999986 453
No 131
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.84 E-value=3.4e-19 Score=178.06 Aligned_cols=271 Identities=18% Similarity=0.146 Sum_probs=182.0
Q ss_pred hhcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChH-
Q 014724 102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS- 178 (419)
Q Consensus 102 ~~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt- 178 (419)
.+.|.|..++|. +++.+++++.+.+......+|+. .| ..++ ++.+++++|.+.. .+|++++|+
T Consensus 26 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~----~~---~~~l----r~~ia~~~~~~~~---~~I~~t~G~~ 91 (356)
T PRK04870 26 TGMVKLDAMENPYRLPAELRAELGERLAEVALNRYPD----PR---AAAL----KAALRAAMGVPAG---ADVLLGNGSD 91 (356)
T ss_pred CCceeCcCCCCCCCCCHHHHHHHHHHhhccccccCCC----CC---HHHH----HHHHHHHhCcCCC---CcEEEcCCHH
Confidence 356788888874 68999999988774321224543 12 1234 4567788887653 247778886
Q ss_pred HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEc
Q 014724 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG 258 (419)
Q Consensus 179 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~ 258 (419)
+++..++.++++|||+|++++|.|..+.. .+...|. ++++++++ +++.+|++++++.+...++|+|+++
T Consensus 92 ~~i~~~~~~~~~~gd~vlv~~P~y~~~~~--------~~~~~g~--~~~~i~~~-~~~~~d~~~l~~~~~~~~~~~v~l~ 160 (356)
T PRK04870 92 ELIQLLALACAKPGATVLAPEPGFVMYRM--------SAKLAGL--EFVGVPLT-ADFTLDLPAMLAAIAEHRPALVFLA 160 (356)
T ss_pred HHHHHHHHHhcCCCCEEEECCCCHHHHHH--------HHHHcCC--EEEEecCC-CCCCCCHHHHHHHhhcCCCCEEEEc
Confidence 58888888999999999999988765431 2234565 55566565 3578999999999876689999999
Q ss_pred CCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC-C-CcEEEeCCCCc-CCCCCeeEEEEeCCCcch
Q 014724 259 ASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-Y-CDVVTTTTHKS-LRGPRGGMIFFKKDPVLG 333 (419)
Q Consensus 259 ~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~-~-~Div~~S~hK~-l~GprgG~i~~~~~~~~~ 333 (419)
+|+||+ ..+.+++.++++..++++|+|+++ ..+......+ .+. . .-+++.|++|. ++|+|.||+++++
T Consensus 161 ~p~NPtG~~~~~~~~~~i~~~~~~~ii~De~y-~~~~~~~~~~-~~~~~~~vi~~~S~SK~~~~GlRiG~~i~~~----- 233 (356)
T PRK04870 161 YPNNPTGNLFDDADVERIIEAAPGLVVVDEAY-QPFAGDSWLP-RLARFPNLLVMRTVSKLGLAGLRLGYLAGHP----- 233 (356)
T ss_pred CCCCCCCCCCCHHHHHHHHHHCCCEEEEECCc-hhhcCcchHH-HHhhCCCEEEEecchhhhhHHHhhhhhhCCH-----
Confidence 999985 567888888887778999999995 3333211111 122 2 23789999993 3788999999887
Q ss_pred hhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEEecCCCcceeEEEEeC
Q 014724 334 VELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 334 ~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~~~~t~~hlv~vd~~ 412 (419)
++.+.+.....++. .+... ..+...++++. +.+++..+++.++++++.+.|++. |+.+.+ .+..++|+++.
T Consensus 234 -~~i~~~~~~~~~~~--~~~~~-q~~a~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~~~~~~~~~~~ 305 (356)
T PRK04870 234 -AWIAELDKVRPPYN--VNVLT-QATALFALEHV--DVLDAQAAQLRAERTRLAAALAALPGVTVFP--SAANFILVRVP 305 (356)
T ss_pred -HHHHHHHHccCCCc--CCHHH-HHHHHHHHhCH--HHHHHHHHHHHHHHHHHHHHHHhCCCcEECC--CCCeEEEEECC
Confidence 67666665432221 11112 22222233321 235677788889999999999887 887654 34567888864
No 132
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.84 E-value=5.4e-19 Score=179.82 Aligned_cols=286 Identities=14% Similarity=0.081 Sum_probs=180.0
Q ss_pred ccccc-ccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHH
Q 014724 104 SLELI-ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF 182 (419)
Q Consensus 104 ~i~L~-~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~ 182 (419)
.+.|. .+-.++|+.|.+++..++.. |..+.....+.+...+. .+.+.. +.+ +++|+++++ .+++.|+|++++
T Consensus 28 ~iyld~~a~g~~p~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~-~~~-~l~g~~~~~---v~~~~~~t~~l~ 100 (406)
T TIGR01814 28 VIYLDGNSLGLMPKAARNALKEELDK-WAKIAIRGHNTGKAPWF-TLDESL-LKL-RLVGAKEDE---VVVMNTLTINLH 100 (406)
T ss_pred cEEecCCCcCcCcHHHHHHHHHHHHH-HHHhhhccCccCCCChh-hhhhhh-ccc-cccCCCCCc---EEEeCCchHHHH
Confidence 36666 44456799999999877643 32111111111111111 222222 334 789998752 244455678999
Q ss_pred HHHHHccCCCC---EEEEeCCCCCccccCccccccccccccccccE--EEecccCCCCCCCCHHHHHHHhhh--cCCeEE
Q 014724 183 EVYTAILKPHD---RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFE--SMPYRLDESTGLVDYDMLEKTAIL--FRPKLI 255 (419)
Q Consensus 183 ~~~~all~pGD---~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~--~v~~~~~~~~~~iD~d~Le~~l~~--~~pklI 255 (419)
.++.++++||+ .|++.+.+|++.+.... ..+...|..++ .+.++.+ +++.+|++++++.++. .++++|
T Consensus 101 ~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~----~~~~~~g~~~~~~~~~~~~~-~~g~~~~~~l~~~~~~~~~~t~lv 175 (406)
T TIGR01814 101 LLLASFYKPTPKRYKILLEAKAFPSDHYAIE----SQLQLHGLTVEESMVQIEPR-EEETLRLEDILDTIEKNGDDIAVI 175 (406)
T ss_pred HHHHHhcCCcCCccEEEecCCCCChHHHHHH----HHHHhcCCCcccceEEeccC-CCCccCHHHHHHHHHhcCCCeEEE
Confidence 99988877753 57777677766431110 01123354431 1233332 3578899999998752 368888
Q ss_pred EEcCCCC--CCcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcCCCCCeeEEEEeCCCc
Q 014724 256 IAGASAY--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRGGMIFFKKDPV 331 (419)
Q Consensus 256 i~~~s~~--p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l~GprgG~i~~~~~~~ 331 (419)
++.+.++ +...|+++|+++|+++|+++++|++|+.|.+ +..++ ++|++++|+||+|.||+||+++..++
T Consensus 176 ~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~-----~id~~~~gvD~~~~s~hK~l~g~pG~~l~v~~~-- 248 (406)
T TIGR01814 176 LLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNV-----PLDLHDWGVDFACWCTYKYLNAGPGAGAFVHEK-- 248 (406)
T ss_pred EEeccccccceecCHHHHHHHHHHcCCEEEEEcccccCCc-----ccccccCCCCEEEEcCccccCCCCCeEEEEehh--
Confidence 8877655 4678999999999999999999999998854 22232 79999999999997666766666553
Q ss_pred chhhHHHHhhhc-----------cc-----------CCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHH
Q 014724 332 LGVELESAINNA-----------VF-----------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASR 389 (419)
Q Consensus 332 ~~~~l~~~i~~~-----------~~-----------~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~ 389 (419)
.+. .+... .+ ....|+|+...++++..|++.+.+.+.++..++..++++++.+.
T Consensus 249 ---~~~-~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~ 324 (406)
T TIGR01814 249 ---HAH-TERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEALRKKSLLLTDYLEEL 324 (406)
T ss_pred ---hhh-hcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 111 11100 00 00136778888888888998876666788889999999999999
Q ss_pred HHhC-----CcEEecCCC---cceeEEEEeC
Q 014724 390 LVEL-----GYKLVSGGS---DNHLVLVDLR 412 (419)
Q Consensus 390 L~~~-----G~~v~~~~t---~~hlv~vd~~ 412 (419)
|++. |++++.... ..+++.+.+.
T Consensus 325 l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~ 355 (406)
T TIGR01814 325 IKARCGGPPVLTIITPRDHAQRGCQLSLTHP 355 (406)
T ss_pred HHhhcCCCCceEEeCCCChhhcCCeEEEEec
Confidence 9874 477775321 1335555543
No 133
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.83 E-value=3.6e-19 Score=177.46 Aligned_cols=267 Identities=19% Similarity=0.178 Sum_probs=176.4
Q ss_pred hcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCCh-HH
Q 014724 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-SP 179 (419)
Q Consensus 103 ~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sG-t~ 179 (419)
+.|+|..+++. +++.+++++.+.+.... ..||.. | ..++ ++.++++++++++ +|++++| ++
T Consensus 25 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~-~~y~~~----~---~~~l----r~aia~~~~~~~~----~I~it~G~~~ 88 (353)
T PRK05387 25 KLIKLNTNENPYPPSPKVLEAIRAALGDDL-RLYPDP----N---ADAL----RQAIAAYYGLDPE----QVFVGNGSDE 88 (353)
T ss_pred ceeeccCCCCCCCCCHHHHHHHHHHhhhhh-hcCCCC----c---HHHH----HHHHHHHhCCCHH----HEEEcCCHHH
Confidence 45888888764 47889999887654321 234321 1 1233 4677788888774 4667777 56
Q ss_pred HHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcC
Q 014724 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 259 (419)
Q Consensus 180 A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~ 259 (419)
|+..++.++++|||+|++++|.|..+.. .....|. ++++++.+ +++.+|++++++ +.++|++++
T Consensus 89 al~~~~~~l~~~gd~vlv~~P~y~~~~~--------~~~~~g~--~~~~v~~~-~~~~~d~~~l~~-----~~~~v~~~~ 152 (353)
T PRK05387 89 VLAHAFLAFFNHDRPLLFPDITYSFYPV--------YAGLYGI--PYEEIPLD-DDFSIDVEDYLR-----PNGGIIFPN 152 (353)
T ss_pred HHHHHHHHhcCCCCEEEEeCCCHHHHHH--------HHHHcCC--EEEEeecC-CCCCCCHHHHHh-----cCCEEEEeC
Confidence 9999999999999999999998754421 1234565 44455454 357899999863 357888889
Q ss_pred CCCCC--cCChHHHHHHHHHh-CCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcC--CCCCeeEEEEeCCCcc
Q 014724 260 SAYPR--DFDYPRMRQIADAV-GALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSL--RGPRGGMIFFKKDPVL 332 (419)
Q Consensus 260 s~~p~--~~dl~~I~~ia~~~-ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l--~GprgG~i~~~~~~~~ 332 (419)
|+||+ ..+.+++.++++++ ++++++|++|. .+.... ....++ ...++++|++|+| +|+|.||++.++
T Consensus 153 P~NPtG~~~~~~~~~~l~~~~~~~~livDe~y~-~~~~~~-~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~---- 226 (353)
T PRK05387 153 PNAPTGIALPLAEIERILAANPDSVVVIDEAYV-DFGGES-AIPLIDRYPNLLVVQTFSKSRSLAGLRVGFAIGHP---- 226 (353)
T ss_pred CCCCCCCCCCHHHHHHHHHhCCCcEEEEeCccc-ccCCcc-hHHHHhhCCCEEEEEehhHhhcchhhhceeeecCH----
Confidence 99985 56889999999876 99999999963 322110 001111 2358899999986 789999999876
Q ss_pred hhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeEEEEeC
Q 014724 333 GVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 333 ~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~vd~~ 412 (419)
++.+.+..........+.+.....++..++.. .+.+++..+++.++++++.+.|++.|+++.+ ...+++|+++.
T Consensus 227 --~~~~~l~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~--~~~~~~~~~~~ 300 (353)
T PRK05387 227 --ELIEALNRVKNSFNSYPLDRLAQAGAIAAIED--EAYFEETRAKVIATRERLVEELEALGFEVLP--SKANFVFARHP 300 (353)
T ss_pred --HHHHHHHHhhccCCCCCcCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCeECC--CcCcEEEEECC
Confidence 67666654322111112222223333333422 1234677888889999999999999998754 34567888875
Q ss_pred C
Q 014724 413 P 413 (419)
Q Consensus 413 ~ 413 (419)
.
T Consensus 301 ~ 301 (353)
T PRK05387 301 S 301 (353)
T ss_pred C
Confidence 3
No 134
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.83 E-value=3e-19 Score=180.50 Aligned_cols=214 Identities=23% Similarity=0.247 Sum_probs=151.6
Q ss_pred hHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccc
Q 014724 144 EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY 223 (419)
Q Consensus 144 ~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~ 223 (419)
+...++| +++++++|.+.. +.++||+.|+.+++.++++|||+|+++++.|++.+.... ......|.
T Consensus 61 p~~~~Le----~~lA~~~g~~~~-----i~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~----~~~~~~gi- 126 (388)
T PRK07811 61 PTRTALE----EQLAALEGGAYG-----RAFSSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLID----KVFTRWGV- 126 (388)
T ss_pred ccHHHHH----HHHHHHhCCCce-----EEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHH----HhCcCCCe-
Confidence 4455666 678888998873 667899999999999999999999999998876532100 00111232
Q ss_pred cEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcCCC
Q 014724 224 FESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADP 301 (419)
Q Consensus 224 ~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~ 301 (419)
++..++ ..|++++++.+.+ ++|+|+++.|+||+ ..|+++|.++|+++|++||+|+++..+.. ..+
T Consensus 127 -~~~~~d------~~d~e~l~~~i~~-~tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD~a~a~~~~-----~~p 193 (388)
T PRK07811 127 -EYTPVD------LSDLDAVRAAITP-RTKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVDNTFASPYL-----QQP 193 (388)
T ss_pred -EEEEeC------CCCHHHHHHhcCc-CCeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEECCCCcccc-----CCc
Confidence 333332 2589999999875 89999999999984 67999999999999999999999866533 234
Q ss_pred CC-CCcEEEeCCCCcCCCC---CeeEEEEeCCCcchhhHHHHhhhcccC-CCCCCChHHHHHHHHHHHHHhcChHHHHHH
Q 014724 302 FK-YCDVVTTTTHKSLRGP---RGGMIFFKKDPVLGVELESAINNAVFP-GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQ 376 (419)
Q Consensus 302 ~~-~~Div~~S~hK~l~Gp---rgG~i~~~~~~~~~~~l~~~i~~~~~~-~~~g~p~~~~iaala~al~~~~~~~~~~~~ 376 (419)
+. ++|++++|++|++.|| +||+++++++ ++.+++...... +...+| ..+ ..++..+. .+..+.
T Consensus 194 ~~~gaDivv~S~sK~l~g~~~~~gG~vv~~~~-----~l~~~~~~~~~~~g~~~s~----~~a-~l~~~~L~--tl~~R~ 261 (388)
T PRK07811 194 LALGADVVVHSTTKYIGGHSDVVGGALVTNDE-----ELDEAFAFLQNGAGAVPGP----FDA-YLTLRGLK--TLAVRM 261 (388)
T ss_pred hhhCCcEEEecCceeecCCCCcEEEEEEECCH-----HHHHHHHHHHHhcCCCCCH----HHH-HHHHhccC--cHHHHH
Confidence 44 8999999999999887 3799888764 565555432211 111111 111 22333332 356778
Q ss_pred HHHHHHHHHHHHHHHhC-CcE
Q 014724 377 NKVVSNCRALASRLVEL-GYK 396 (419)
Q Consensus 377 ~~v~~n~~~l~~~L~~~-G~~ 396 (419)
++..+|+..++++|++. ++.
T Consensus 262 ~~~~~na~~la~~L~~~p~v~ 282 (388)
T PRK07811 262 DRHSENAEAVAEFLAGHPEVS 282 (388)
T ss_pred HHHHHHHHHHHHHHHhCCCee
Confidence 88899999999999986 553
No 135
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.83 E-value=3.4e-19 Score=181.47 Aligned_cols=267 Identities=17% Similarity=0.168 Sum_probs=182.3
Q ss_pred ccccccCCCC----hHHHHHHHhhhhhccCCCCCCCCCCCCchhHH-HHHHHHHHHHHHHHcCCCCCCCceeEecCChHH
Q 014724 105 LELIASENFT----SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYI-DELETLCQKRALAAFNLDENKWGVNVQPLSGSP 179 (419)
Q Consensus 105 i~L~~sen~~----~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~-~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~ 179 (419)
+...+|+||+ +|+++++..+.+ .+|+.|..++|...|+... .++| +.+++++|.+.. ++++||..
T Consensus 104 ~l~FsSndYLGL~~~p~v~~a~~~ai-~~yG~g~~gSrl~~G~~~~h~~LE----~~LA~f~g~e~a-----ll~sSGy~ 173 (476)
T PLN02955 104 LLLFSGNDYLGLSSHPTISNAAANAA-KEYGMGPKGSALICGYTTYHRLLE----SSLADLKKKEDC-----LVCPTGFA 173 (476)
T ss_pred EEEeeccCccCCCCCHHHHHHHHHHH-HHcCCCCCCcCccccChHHHHHHH----HHHHHHHCCCcE-----EEECChHH
Confidence 4456788886 799999998887 4687788888888776433 5566 678899998873 78899999
Q ss_pred HHHHHHHHcc--------------CCCCEEEEeCCCCCccccCcccccccccccccc--ccEEEecccCCCCCCCCHHHH
Q 014724 180 ANFEVYTAIL--------------KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI--YFESMPYRLDESTGLVDYDML 243 (419)
Q Consensus 180 A~~~~~~all--------------~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~--~~~~v~~~~~~~~~~iD~d~L 243 (419)
||..++.+|. .++|.|+.....|.+... | +.+... ..+++.|++ .|+++|
T Consensus 174 AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~d-G-------~~ls~~~~~a~~~~f~H------ND~~~L 239 (476)
T PLN02955 174 ANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIID-G-------VRLAERQGNVEVFVYRH------CDMYHL 239 (476)
T ss_pred HHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHH-H-------HHhccccCCceEEEeCC------CCHHHH
Confidence 9999998872 567788888777766542 2 222210 134555543 689999
Q ss_pred HHHhhhcC--CeEEEEcC--CCCCCcCChHHHHHHHHHhCCEEEEecccccccccc---CCcC-CCC-CCCcEEEeCCCC
Q 014724 244 EKTAILFR--PKLIIAGA--SAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAA---SVVA-DPF-KYCDVVTTTTHK 314 (419)
Q Consensus 244 e~~l~~~~--pklIi~~~--s~~p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~---g~~~-~~~-~~~Div~~S~hK 314 (419)
+++++..+ .++|+++. +..+...|+++|.++|++||++|++|+||..|..+. |... ..+ +..||+++|++|
T Consensus 240 e~~L~~~~~~~~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsK 319 (476)
T PLN02955 240 NSLLSSCKMKRKVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSK 319 (476)
T ss_pred HHHHHhCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCcc
Confidence 99986532 34566553 233446689999999999999999999998887654 2111 111 257899999999
Q ss_pred cCCCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChH-HHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC
Q 014724 315 SLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHN-HTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL 393 (419)
Q Consensus 315 ~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~-~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~ 393 (419)
+| |-+|||+++++ ++.+.+.....++..+++.. ...++...+++.+..+ ...++++.+|.++|.+. .
T Consensus 320 A~-G~~GGfi~gs~------~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~~--~~~r~~L~~n~~~fr~~---~ 387 (476)
T PLN02955 320 AA-GCHGGFIACSK------KWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARKE--KWRRKAIWERVKEFKAL---S 387 (476)
T ss_pred ch-hccCceeecHH------HHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHh---c
Confidence 97 67899999988 56676664333333333332 3344444466655432 34667888888888873 3
Q ss_pred CcEEecCCCcceeEEEEeC
Q 014724 394 GYKLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 394 G~~v~~~~t~~hlv~vd~~ 412 (419)
|+.+ .++++.|-+.
T Consensus 388 G~~~-----~sPI~pI~ig 401 (476)
T PLN02955 388 GVDI-----SSPIISLVVG 401 (476)
T ss_pred CCCC-----CCCEEEEEeC
Confidence 6653 2577666554
No 136
>PLN02242 methionine gamma-lyase
Probab=99.83 E-value=2.4e-19 Score=182.68 Aligned_cols=223 Identities=18% Similarity=0.182 Sum_probs=154.4
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccc
Q 014724 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (419)
Q Consensus 142 g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g 221 (419)
+++...+|| +++++++|.+. + +++.||+.|+..++.++++|||+|+++++.|+++..... . ......|
T Consensus 74 ~~Pt~~~LE----~~lA~l~g~~~----~-l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~--~-~~~~~~G 141 (418)
T PLN02242 74 FNPTVLNLG----RQMAALEGTEA----A-YCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLA--H-FLPRKCN 141 (418)
T ss_pred CChhHHHHH----HHHHHHhCCCe----E-EEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHH--H-hhhhccC
Confidence 456677777 57888999887 2 678899999999999999999999999987766531100 0 0001233
Q ss_pred cccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcC
Q 014724 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (419)
Q Consensus 222 ~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~ 299 (419)
. ++..++ ..|++++++++++.++|+|++++++||+ ..|+++|+++|+++|++|++|++|. .+..
T Consensus 142 ~--~~~~~d------~~d~e~l~~~i~~~~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livDea~~-~~~~----- 207 (418)
T PLN02242 142 I--TTTFVD------ITDLEAVKKAVVPGKTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVDNTFA-PMVL----- 207 (418)
T ss_pred c--eEEEcC------CCCHHHHHHhcCcCCCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEECCCC-ccCC-----
Confidence 3 333332 2489999999875358999999999984 5699999999999999999999974 3221
Q ss_pred CCCC-CCcEEEeCCCCcCCCC--C-eeEEEEeCCCcchhhHHHHhhhcccC--CCCCCChHHHHHHHHHHHHHhcChHHH
Q 014724 300 DPFK-YCDVVTTTTHKSLRGP--R-GGMIFFKKDPVLGVELESAINNAVFP--GLQGGPHNHTIGGLAVCLKHAQSPEFK 373 (419)
Q Consensus 300 ~~~~-~~Div~~S~hK~l~Gp--r-gG~i~~~~~~~~~~~l~~~i~~~~~~--~~~g~p~~~~iaala~al~~~~~~~~~ 373 (419)
.+.+ ++|++++|++|++.|+ + ||++++++ ++.+.+...... ...|.+.....+++. + ..+ ..+.
T Consensus 208 ~~~~~g~divv~S~SK~l~g~g~~~gG~iv~~~------~li~~l~~~~~~~~~~~g~~~~~~~A~l~-~-~~l--~tl~ 277 (418)
T PLN02242 208 SPARLGADVVVHSISKFISGGADIIAGAVCGPA------ELVNSMMDLHHGALMLLGPTMNPKVAFEL-S-ERL--PHLS 277 (418)
T ss_pred CHHHcCCcEEEEeCccccCCCCCceEEEEEcCH------HHHHHHHHHhhhhhhccCCCCCHHHHHHH-H-cCC--CcHH
Confidence 2233 6899999999998543 4 79999876 565555433111 122322222232222 2 222 2355
Q ss_pred HHHHHHHHHHHHHHHHHHhCCcEEecC
Q 014724 374 VYQNKVVSNCRALASRLVELGYKLVSG 400 (419)
Q Consensus 374 ~~~~~v~~n~~~l~~~L~~~G~~v~~~ 400 (419)
.+.+++.+|++++++.|++.|++|..+
T Consensus 278 ~r~~~~~~~a~~la~~L~~~~~~V~yP 304 (418)
T PLN02242 278 LRMKEHCRRAMEYAKRMKELGLKVIYP 304 (418)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCEEECC
Confidence 677889999999999999999888743
No 137
>PRK09105 putative aminotransferase; Provisional
Probab=99.83 E-value=7.9e-19 Score=176.50 Aligned_cols=263 Identities=17% Similarity=0.105 Sum_probs=174.3
Q ss_pred hhcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCCh-H
Q 014724 102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-S 178 (419)
Q Consensus 102 ~~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sG-t 178 (419)
++.+.|..+++. +|+.+++++.+.+.. . ..|+. ....++ ++.+++.+|++++ +|++++| +
T Consensus 43 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~-~-~~Y~~-------~~~~~L----r~aia~~~~v~~e----~I~it~Gs~ 105 (370)
T PRK09105 43 EGAVFLNANECPLGPSPAARDAAARSAAL-S-GRYDL-------ELEDDL----RTLFAAQEGLPAD----HVMAYAGSS 105 (370)
T ss_pred CCcEEecCCCCCCCCCHHHHHHHHHHHHH-h-cCCCC-------chHHHH----HHHHHHHhCcChh----hEEEcCChH
Confidence 345777777764 589999999876532 1 12332 112344 3566778899875 4666776 5
Q ss_pred HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEc
Q 014724 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG 258 (419)
Q Consensus 179 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~ 258 (419)
+++..++.++++|||+|++++|.|..+.. .+...|. +++.++.+ +++.+|++++++.. .++++|+++
T Consensus 106 ~ai~~~~~~l~~~gd~Vli~~P~y~~~~~--------~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~~--~~~~~v~l~ 172 (370)
T PRK09105 106 EPLNYAVLAFTSPTAGLVTADPTYEAGWR--------AADAQGA--PVAKVPLR-ADGAHDVKAMLAAD--PNAGLIYIC 172 (370)
T ss_pred HHHHHHHHHHcCCCCEEEEeCCChHHHHH--------HHHHcCC--eEEEecCC-CCCCCCHHHHHhcC--CCCCEEEEe
Confidence 79999999999999999999998876632 2234565 44455454 35789999998763 368999999
Q ss_pred CCCCCC--cCChHHHHHHHHH--hCCEEEEeccccccccccCCcCCCCC----CCc-EEEeCCCCcC--CCCCeeEEEEe
Q 014724 259 ASAYPR--DFDYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPFK----YCD-VVTTTTHKSL--RGPRGGMIFFK 327 (419)
Q Consensus 259 ~s~~p~--~~dl~~I~~ia~~--~ga~livD~ah~~Gl~~~g~~~~~~~----~~D-iv~~S~hK~l--~GprgG~i~~~ 327 (419)
+|+||+ ..+.++|.++++. +|++||+|++|. .+... ++..+ +.+ ++++|++|+| +|+|.||++++
T Consensus 173 nP~NPTG~~~~~~~l~~l~~~~~~~~~lIvDEaY~-~f~~~---~s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~ 248 (370)
T PRK09105 173 NPNNPTGTVTPRADIEWLLANKPAGSVLLVDEAYI-HFSDA---PSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAAR 248 (370)
T ss_pred CCCCCCCcCcCHHHHHHHHHhCCCCcEEEEECchH-HhccC---cchHHHHhhCCCEEEEecccHhhcCCccceeeeecC
Confidence 999985 5567777777654 489999999963 33211 11111 334 6789999987 78899999988
Q ss_pred CCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeE
Q 014724 328 KDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLV 407 (419)
Q Consensus 328 ~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv 407 (419)
+ ++.+.+... .. . .+......+...++.+ ....++..+++.++++++.+.|++.|+++.. ++..++
T Consensus 249 ~------~~i~~l~~~-~~--~-~~~~~~~~aa~~~L~~--~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~--~~~~f~ 314 (370)
T PRK09105 249 P------DLLAKLARF-GH--N-PLPVPAAAAGLASLRD--PKLVPQRRAENAAVREDTIAWLKKKGYKCTP--SQANCF 314 (370)
T ss_pred H------HHHHHHHhc-CC--C-CcCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCcCC--CCCcEE
Confidence 7 566666553 11 1 1222222222233432 1234666778888999999999999988765 233455
Q ss_pred EEEeC
Q 014724 408 LVDLR 412 (419)
Q Consensus 408 ~vd~~ 412 (419)
++++.
T Consensus 315 ~~~~~ 319 (370)
T PRK09105 315 MVDVK 319 (370)
T ss_pred EEeCC
Confidence 67764
No 138
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.83 E-value=5.3e-19 Score=175.73 Aligned_cols=268 Identities=18% Similarity=0.169 Sum_probs=178.4
Q ss_pred hcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCCh-HH
Q 014724 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-SP 179 (419)
Q Consensus 103 ~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sG-t~ 179 (419)
+.|+|..+++. +++.+++++.+.+... ..|+.. .+ .++ ++.++++++++++ +|++++| ++
T Consensus 20 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~--~~y~~~---~~----~~l----r~~ia~~~~~~~~----~i~~~~G~~~ 82 (346)
T TIGR01141 20 EVIKLNSNENPFGPPPKAKEALRAEADKL--HRYPDP---DP----AEL----KQALADYYGVDPE----QILLGNGSDE 82 (346)
T ss_pred ceEEccCCCCCCCCCHHHHHHHHHhHHHh--hcCCCC---CH----HHH----HHHHHHHhCcChH----HEEEcCCHHH
Confidence 45778776643 5899999998875321 133321 11 234 4667888887764 3556666 56
Q ss_pred HHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcC
Q 014724 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 259 (419)
Q Consensus 180 A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~ 259 (419)
++..++.+++++||+|++++|.+..+.. .+...|. +++.+++++ ++.+|++++++.+. .++++|++++
T Consensus 83 ~l~~~~~~l~~~gd~v~~~~p~y~~~~~--------~~~~~g~--~~~~~~~~~-~~~~d~~~l~~~~~-~~~~~v~l~~ 150 (346)
T TIGR01141 83 IIELLIRAFLEPGDAVLVPPPTYSMYEI--------SAKIHGA--EVVKVPLDE-DGQLDLEDILVAID-DKPKLVFLCS 150 (346)
T ss_pred HHHHHHHHhcCCCCEEEEcCCCHHHHHH--------HHHHcCC--eEEEeccCC-CCCCCHHHHHHhcC-CCCCEEEEeC
Confidence 8888899999999999999987644321 1233454 455555553 47899999999875 4789999998
Q ss_pred CCCCC--cCChHHHHHHHHHh--CCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcC--CCCCeeEEEEeCCCc
Q 014724 260 SAYPR--DFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSL--RGPRGGMIFFKKDPV 331 (419)
Q Consensus 260 s~~p~--~~dl~~I~~ia~~~--ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l--~GprgG~i~~~~~~~ 331 (419)
++||+ ..+.+++.++|+.+ |+++++|++|. ++...+.....+. ..+++++|+||+| +|+|.|+++.++
T Consensus 151 p~NptG~~~~~~~~~~l~~~~~~~~~ii~D~~y~-~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~--- 226 (346)
T TIGR01141 151 PNNPTGNLLSRSDIEAVLERTPEDALVVVDEAYG-EFSGEPSTLPLLAEYPNLIVLRTLSKAFGLAGLRIGYAIANA--- 226 (346)
T ss_pred CCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchh-hhcCCccHHHHHhhCCCEEEEehhhHhhhchhhhceeeecCH---
Confidence 89885 57889999999887 99999999964 4332211101111 2347789999997 577889999876
Q ss_pred chhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEEecCCCcceeEEEE
Q 014724 332 LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLVLVD 410 (419)
Q Consensus 332 ~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~~~~t~~hlv~vd 410 (419)
++.+++.....+. +.+ .....+...++... ..+++..+++.++++++.+.|++. |+++.+ ....++|++
T Consensus 227 ---~~~~~~~~~~~~~--~~~-~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~--~~g~~~~~~ 296 (346)
T TIGR01141 227 ---EIIDALNKVRAPF--NLS-RLAQAAAIAALRDD--DFIEKTVEEINAERERLYDGLKKLPGLEVYP--SDANFVLIR 296 (346)
T ss_pred ---HHHHHHHhccCCC--CCC-HHHHHHHHHHhCCH--HHHHHHHHHHHHHHHHHHHHHHhcCCCEECC--CcCCEEEEe
Confidence 6766665443222 112 22222222233221 135677888899999999999987 888664 245678888
Q ss_pred eCC
Q 014724 411 LRP 413 (419)
Q Consensus 411 ~~~ 413 (419)
+..
T Consensus 297 ~~~ 299 (346)
T TIGR01141 297 FPR 299 (346)
T ss_pred cCC
Confidence 753
No 139
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.83 E-value=1.5e-18 Score=176.66 Aligned_cols=268 Identities=19% Similarity=0.221 Sum_probs=177.0
Q ss_pred ccccCCCC----hHHHHHHHhhhhhccCCCCCCCCCCCCch-hHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHH
Q 014724 107 LIASENFT----SRAVMEAVGSCLTNKYSEGLPGKRYYGGN-EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPAN 181 (419)
Q Consensus 107 L~~sen~~----~~~V~eal~~~l~~~y~~g~p~~r~~~g~-~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~ 181 (419)
...+++|+ +|+|++++.+.+. +|..+..+++...|+ +...++| +++++++|.+. .++++||++||
T Consensus 49 ~~~sn~ylgl~~~p~v~~a~~~~~~-~~~~~~~~s~~~~~~~~~~~~le----~~la~~~g~~~-----~~~~~SG~~An 118 (406)
T PRK13393 49 VWCSNDYLGMGQHPAVLAAMHEALD-TCGAGAGGTRNISGTNHYHVLLE----AELADLHGKEA-----ALLFTSGYVSN 118 (406)
T ss_pred EeecccccCCCCCHHHHHHHHHHHH-HcCCCCcccccccCChHHHHHHH----HHHHHHhCCCc-----EEEeCCcHHHH
Confidence 34677775 7999999999885 465555455544343 3334555 67889998754 37889999999
Q ss_pred HHHHHHccC--CCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhh---cCCeEEE
Q 014724 182 FEVYTAILK--PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---FRPKLII 256 (419)
Q Consensus 182 ~~~~~all~--pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~---~~pklIi 256 (419)
..++.++.. +||.|+.....|++.+. .+...+. +...++. .|++.+++.++. .++++|+
T Consensus 119 ~~ai~~l~~~~~g~~I~~~~~~H~s~~~--------~~~~~g~--~~~~~~~------~d~~~l~~~l~~~~~~~~~~v~ 182 (406)
T PRK13393 119 WAALSTLGSRLPGCVILSDELNHASMIE--------GIRHSRA--EKRIFRH------NDPADLERKLSDLDPHRPKLVA 182 (406)
T ss_pred HHHHHHhhcCCCCCEEEEccchhHHHHH--------HHHHcCC--eEEEeCC------CCHHHHHHHHHhccCCCCEEEE
Confidence 999988765 88888877777766542 1223343 2333322 478888887753 2567888
Q ss_pred EcCCCCC--CcCChHHHHHHHHHhCCEEEEecccccccccc-C--CcCC-CC-CCCcEEEeCCCCcCCCCCeeEEEEeCC
Q 014724 257 AGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAA-S--VVAD-PF-KYCDVVTTTTHKSLRGPRGGMIFFKKD 329 (419)
Q Consensus 257 ~~~s~~p--~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~-g--~~~~-~~-~~~Div~~S~hK~l~GprgG~i~~~~~ 329 (419)
+++++++ ...|+++|.++|+++|+++++|++|..|+.+. | .... .+ +..|++++|++|+|+ ..||++++++
T Consensus 183 ~~~v~~~~G~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g-~~GG~~~~~~- 260 (406)
T PRK13393 183 FESVYSMDGDIAPIAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFG-VMGGYITGSA- 260 (406)
T ss_pred EcCCCCCCCchhCHHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhc-ccCceeeCCH-
Confidence 8876654 56799999999999999999999998787432 1 1110 11 245899999999984 4579988776
Q ss_pred CcchhhHHHHhhhcccCCC-CCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeEE
Q 014724 330 PVLGVELESAINNAVFPGL-QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVL 408 (419)
Q Consensus 330 ~~~~~~l~~~i~~~~~~~~-~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~ 408 (419)
++.+.+.....++. .++.+....++...+++.+... . ...++..+++++|.+.|++.|++++. ++.+++.
T Consensus 261 -----~~~~~l~~~~~~~~~t~~~~p~~~aa~~aaL~~~~~~-~-~~~~~~~~~~~~l~~~L~~~g~~~~~--~~~~i~~ 331 (406)
T PRK13393 261 -----ALCDFIRSFASGFIFTTSLPPAVAAGALASVRHLKAS-S-AERERHQDRVARLRARLDKAGIPHLP--NPSHIVP 331 (406)
T ss_pred -----HHHHHHHHhCcCceecCccCHHHHHHHHHHHHHHhhC-H-HHHHHHHHHHHHHHHHHHHcCCCcCC--CCCCeEE
Confidence 56666554332221 2233333344444566655322 2 23456678899999999988987664 3556666
Q ss_pred EEe
Q 014724 409 VDL 411 (419)
Q Consensus 409 vd~ 411 (419)
+.+
T Consensus 332 v~~ 334 (406)
T PRK13393 332 VMV 334 (406)
T ss_pred EEe
Confidence 654
No 140
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.83 E-value=1.2e-18 Score=178.73 Aligned_cols=274 Identities=13% Similarity=0.081 Sum_probs=171.5
Q ss_pred cccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCCh-HHH
Q 014724 104 SLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-SPA 180 (419)
Q Consensus 104 ~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sG-t~A 180 (419)
.++|..+... ++|.+.+++.+..... ..|+. ..|. .++.+.+.+++.+.. ..+ .+|++++| ++|
T Consensus 87 ~i~L~~g~p~~~~~p~~~~~~~~~~~~~--~~Y~~---~~g~---~~lr~~ia~~~~~~~--~~~---~~Iiit~G~~~a 153 (431)
T PRK15481 87 LHDLAGGNPDPQRLPDLSRYFARLSRTP--RLYGD---APVS---PELHAWAARWLRDDC--PVA---FEIDLTSGAIDA 153 (431)
T ss_pred hhhhhcCCCChhHhHHHHHHHHHhhhhh--hhcCC---cCCC---HHHHHHHHHHHhhcc--CCc---CeEEEecCcHHH
Confidence 3556554322 3456777766543221 12332 1222 245444444443322 222 14666776 569
Q ss_pred HHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEc-C
Q 014724 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG-A 259 (419)
Q Consensus 181 ~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~-~ 259 (419)
+..++.++++|||.|++.+|.|..+.. .+...|+ +++++++++ + .+|+|+|++.++. ++|+++++ +
T Consensus 154 l~~~~~~l~~pgd~Vlv~~P~y~~~~~--------~~~~~g~--~~~~v~~~~-~-g~~~~~l~~~~~~-~~k~i~~~p~ 220 (431)
T PRK15481 154 IERLLCAHLLPGDSVAVEDPCFLSSIN--------MLRYAGF--SASPVSVDA-E-GMQPEKLERALAQ-GARAVILTPR 220 (431)
T ss_pred HHHHHHHhCCCCCEEEEeCCCcHHHHH--------HHHHcCC--eEEeeccCC-C-CCCHHHHHHHHhc-CCCEEEECCC
Confidence 999999999999999999998877642 2344565 455555553 3 4899999998864 78988887 8
Q ss_pred CCCCC--cCCh---HHHHHHHHHh-CCEEEEeccccccccccCCcCCCCC---CCcEEEeCCCCcC-CCCCeeEEEEeCC
Q 014724 260 SAYPR--DFDY---PRMRQIADAV-GALLMMDMAHISGLVAASVVADPFK---YCDVVTTTTHKSL-RGPRGGMIFFKKD 329 (419)
Q Consensus 260 s~~p~--~~dl---~~I~~ia~~~-ga~livD~ah~~Gl~~~g~~~~~~~---~~Div~~S~hK~l-~GprgG~i~~~~~ 329 (419)
|+||+ ..+. ++|.++|+++ +++||+|+++ ..+.+.+. ..++. ..-++++|+||+| +|.|.||++.++
T Consensus 221 p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y-~~~~~~~~-~~~~~~~~~~vi~~~SfSK~~~~GlRiG~~i~~~- 297 (431)
T PRK15481 221 AHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHF-ALLSSSPY-HSVIPQTTQRWALIRSVSKALGPDLRLAFVASDS- 297 (431)
T ss_pred CCCCCCccCCHHHHHHHHHHHHhcCCceEEecCch-hhhccCCC-CCCCcCCCCCEEEEeeeccccCCCceeEEEeCCH-
Confidence 99995 3444 5899999999 9999999984 45543321 22232 1238899999988 788999999887
Q ss_pred CcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhc-ChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeEE
Q 014724 330 PVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ-SPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVL 408 (419)
Q Consensus 330 ~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~-~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~ 408 (419)
++.+.+.........+.+. ....+++.++..-. ....++..+.+.++++.+.+.|++.|+++.. .....++|
T Consensus 298 -----~~~~~~~~~~~~~~~~~s~-~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~~~~~~~-p~gg~f~~ 370 (431)
T PRK15481 298 -----ATSARLRLRLNSGTQWVSH-LLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQYGIAIPS-PGDGLNLW 370 (431)
T ss_pred -----HHHHHHHHHHhccccCCCH-HHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccc-CCCeEEEE
Confidence 5666665432222121222 22233333443211 0123566777888899999999998887633 24567899
Q ss_pred EEeCC
Q 014724 409 VDLRP 413 (419)
Q Consensus 409 vd~~~ 413 (419)
+++..
T Consensus 371 ~~l~~ 375 (431)
T PRK15481 371 LPLDT 375 (431)
T ss_pred EECCC
Confidence 99853
No 141
>PLN02721 threonine aldolase
Probab=99.83 E-value=2.2e-18 Score=171.41 Aligned_cols=272 Identities=18% Similarity=0.162 Sum_probs=166.5
Q ss_pred cccccccCC-CChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHH
Q 014724 104 SLELIASEN-FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF 182 (419)
Q Consensus 104 ~i~L~~sen-~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~ 182 (419)
.++|..+++ ++++.+++++....... ...+| + +...++| +.+++++|.+. .+++++|+.++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~a~~~~~~~~------~~~~~-~-~~~~~l~----~~la~~~~~~~-----~~~~~~Gs~a~~ 69 (353)
T PLN02721 7 VVDLRSDTVTKPTDAMRAAMANAEVDD------DVLGY-D-PTALRLE----EEMAKIFGKEA-----ALFVPSGTMGNL 69 (353)
T ss_pred hhhhhcccccCCCHHHHHHHHhccCCC------cccCC-C-HHHHHHH----HHHHHHhCCce-----eEEecCccHHHH
Confidence 356666653 46789999986431010 11122 2 2245565 56788888865 266788999888
Q ss_pred HHHHHccC-CCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhh------cCCeEE
Q 014724 183 EVYTAILK-PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL------FRPKLI 255 (419)
Q Consensus 183 ~~~~all~-pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~------~~pklI 255 (419)
.++.++++ |||+|++.+++|.+....+. .....|. +++.++.+ +++.+|+|++++.+++ .++|+|
T Consensus 70 ~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~-----~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~~~~~~~v 141 (353)
T PLN02721 70 ISVLVHCDVRGSEVILGDNSHIHLYENGG-----ISTLGGV--HPRTVKNN-EDGTMDLDAIEAAIRPKGDDHFPTTRLI 141 (353)
T ss_pred HHHHHHccCCCCeEEEcCccceehhcccc-----hhhhcCc--eeEecCCC-cCCCcCHHHHHHHHHhccCCCCCcceEE
Confidence 88888887 99999999987643321100 1123454 44445444 4578999999999974 268888
Q ss_pred EEcC-CCCCC--cCC---hHHHHHHHHHhCCEEEEeccccccccc-cCCcCCC-CCCCcEEEeCCCCcCCCCCeeEEEEe
Q 014724 256 IAGA-SAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVA-ASVVADP-FKYCDVVTTTTHKSLRGPRGGMIFFK 327 (419)
Q Consensus 256 i~~~-s~~p~--~~d---l~~I~~ia~~~ga~livD~ah~~Gl~~-~g~~~~~-~~~~Div~~S~hK~l~GprgG~i~~~ 327 (419)
++++ +++|+ ..| +++|.++|+++|++|++|++|..+... .+..+.. ..++|.++.|+||+|++|.|++++.+
T Consensus 142 ~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~~G~~~~~~ 221 (353)
T PLN02721 142 CLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVPVHRLVKAADSVSVCLSKGLGAPVGSVIVGS 221 (353)
T ss_pred EEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCCHHHHhhhCCEEEEecccccCCceeeEEecC
Confidence 8865 45553 334 789999999999999999997654211 1111111 12788888899999988777666666
Q ss_pred CCCcchhhHHHHhhhcccCCCCCCCh-HHHHHHHH-HHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEE-ecCCCc
Q 014724 328 KDPVLGVELESAINNAVFPGLQGGPH-NHTIGGLA-VCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKL-VSGGSD 403 (419)
Q Consensus 328 ~~~~~~~~l~~~i~~~~~~~~~g~p~-~~~iaala-~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v-~~~~t~ 403 (419)
+ ++.+.+...... ..+++. ....++.+ .++.. ..+..++..++++++.+.|++. |+.+ .. ...
T Consensus 222 ~------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~ 288 (353)
T PLN02721 222 K------SFIRKAKRLRKT-LGGGMRQVGVLAAAALVALQE-----NVPKLEDDHKKAKLLAEGLNQIKGLRVNVA-AVE 288 (353)
T ss_pred H------HHHHhHHHHHHh-cCCCeehhHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhCCCcEEecC-Ccc
Confidence 5 555544322111 111111 11111111 12322 2223445567788999999987 7765 33 345
Q ss_pred ceeEEEEeCC
Q 014724 404 NHLVLVDLRP 413 (419)
Q Consensus 404 ~hlv~vd~~~ 413 (419)
.+++|+++..
T Consensus 289 ~~~~~~~~~~ 298 (353)
T PLN02721 289 TNIVYFDITD 298 (353)
T ss_pred ceEEEEEccC
Confidence 6788988754
No 142
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.83 E-value=2.1e-18 Score=179.26 Aligned_cols=280 Identities=14% Similarity=0.075 Sum_probs=175.5
Q ss_pred ccccccCCCChHHHHHHHhhhhhccC--CCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCCh-HHHH
Q 014724 105 LELIASENFTSRAVMEAVGSCLTNKY--SEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-SPAN 181 (419)
Q Consensus 105 i~L~~sen~~~~~V~eal~~~l~~~y--~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sG-t~A~ 181 (419)
|.+.++.+..|..+++++.+.+.+.. ...|+. ..| ..++++.+.+++.+..|.+.+. .+|++++| ++|+
T Consensus 80 i~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~Y~~---~~G---~~~LR~aia~~~~~~~g~~~~~--~~I~it~Ga~~al 151 (481)
T PTZ00377 80 LEDPSVSSLFPADVVARAKEYLNAIGGGTGAYTD---SAG---YPFVRKAVAAFIERRDGVPKDP--SDIFLTDGASSGI 151 (481)
T ss_pred hcCccccccCCHHHHHHHHHHHHhCCCcccCcCc---ccC---CHHHHHHHHHHHHHhcCCCCCh--hhEEEcCCHHHHH
Confidence 33333333456788888766554311 112332 123 3467777778887777765431 24667777 5699
Q ss_pred HHHHHHcc-CCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCC-CCCCCHHHHHHHhhhc-----CCeE
Q 014724 182 FEVYTAIL-KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILF-----RPKL 254 (419)
Q Consensus 182 ~~~~~all-~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~-~~~iD~d~Le~~l~~~-----~pkl 254 (419)
..++.+++ +|||.|++++|.|.++.. .+...|. ++++++++++ ++.+|+++|++.+.+. ++|+
T Consensus 152 ~~~~~~l~~~~gD~Vlv~~P~y~~y~~--------~~~~~g~--~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ 221 (481)
T PTZ00377 152 KLLLQLLIGDPSDGVMIPIPQYPLYSA--------AITLLGG--KQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRA 221 (481)
T ss_pred HHHHHHhccCCCCEEEECCCCchhHHH--------HHHHcCC--EEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeE
Confidence 99999998 799999999998876542 2344555 4555555543 4689999999998642 6898
Q ss_pred EEEcCCCCCC--cCC---hHHHHHHHHHhCCEEEEeccccccccccC--CcCCC------CC-C-----CcEEEeCCCCc
Q 014724 255 IIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAAS--VVADP------FK-Y-----CDVVTTTTHKS 315 (419)
Q Consensus 255 Ii~~~s~~p~--~~d---l~~I~~ia~~~ga~livD~ah~~Gl~~~g--~~~~~------~~-~-----~Div~~S~hK~ 315 (419)
|++++|+||+ ..+ +++|+++|++||++||+|+++ ..+.+.+ .+++. +. . .-++++|+||+
T Consensus 222 l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y-~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~ 300 (481)
T PTZ00377 222 LVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVY-QENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKG 300 (481)
T ss_pred EEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhh-HhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcc
Confidence 8888999995 333 788999999999999999995 4555532 11111 11 1 12678999997
Q ss_pred C---CCCCeeEEEE---eCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHh--cC-------hHHHHHHHHHH
Q 014724 316 L---RGPRGGMIFF---KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHA--QS-------PEFKVYQNKVV 380 (419)
Q Consensus 316 l---~GprgG~i~~---~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~--~~-------~~~~~~~~~v~ 380 (419)
+ +|+|.||+++ ++ ++.+.+.......+ +. +.....+...++... .. .+.++..+++.
T Consensus 301 ~~~~~GlRiG~~~~~~~p~------~li~~l~~~~~~~~-~~-~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (481)
T PTZ00377 301 IIGECGRRGGYFELTNIPP------EVREQIYKLASINL-CS-NVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLK 372 (481)
T ss_pred cccCCcCceEEEEEeCCCH------HHHHHHHHHhheec-CC-ChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHH
Confidence 4 6999999987 44 66666655432221 22 222233333344210 00 11122223456
Q ss_pred HHHHHHHHHHHhC-CcEEecCCCcceeEEEEeC
Q 014724 381 SNCRALASRLVEL-GYKLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 381 ~n~~~l~~~L~~~-G~~v~~~~t~~hlv~vd~~ 412 (419)
++++.+.+.|++. |+++... ....++|++++
T Consensus 373 ~rr~~l~~~L~~~~g~~~~~p-~gg~fl~~~~~ 404 (481)
T PTZ00377 373 RRAELLTDELNKIEGVSCQPV-EGAMYAFPRIE 404 (481)
T ss_pred HHHHHHHHHHhcCCCcEeecC-CeeEEEEeecc
Confidence 7788899999887 8887652 34566887764
No 143
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.83 E-value=2.4e-18 Score=175.44 Aligned_cols=280 Identities=11% Similarity=0.048 Sum_probs=183.6
Q ss_pred CCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCC--CCCceeEecCChHHHHHHHHHHc
Q 014724 111 ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDE--NKWGVNVQPLSGSPANFEVYTAI 188 (419)
Q Consensus 111 en~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~--~~~~v~V~~~sGt~A~~~~~~al 188 (419)
.+++.|.+.+++.+.+...+ ++|.+ .|.. .++|+.+++++++++|+++ ++. ..+++++||+||+.++.+.
T Consensus 50 tt~~~p~~~~~~~~~l~~~~--~np~s---~~~~--~~le~~~~~~la~llg~~~~~~~~-~g~~TsGgTEAn~~al~~a 121 (431)
T TIGR01788 50 TTWMEPEARKLMDETINKNM--IDKDE---YPQT--AEIENRCVNMLADLWHAPAKDAEA-VGTSTIGSSEAIMLGGLAM 121 (431)
T ss_pred CCCCCHHHHHHHHHHHhcCC--CCccc---CccH--HHHHHHHHHHHHHHhCCCCCCCCC-eEEEechHHHHHHHHHHHH
Confidence 35567889999988875333 44432 1222 3788899999999999982 232 2234577899999887654
Q ss_pred cC--------CC-----CEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEE
Q 014724 189 LK--------PH-----DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLI 255 (419)
Q Consensus 189 l~--------pG-----D~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklI 255 (419)
.+ .| -+|++.+.+|.+.. +.+...|..++ .++++++++.+|+++|++++++ ++.+|
T Consensus 122 r~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~--------ka~~~lg~~v~--~i~~d~~~~~vd~~~L~~~i~~-~t~lV 190 (431)
T TIGR01788 122 KWRWRKRMEAAGKPTDKPNLVMGSNVQVCWE--------KFARYFDVELR--EVPMDPGRYVIDPEQVVEAVDE-NTIGV 190 (431)
T ss_pred HHHHHHHHHhcCCCCCCcEEEEcCcchHHHH--------HHHHHcCceeE--EEecCCCceeeCHHHHHHHHhh-CCeEE
Confidence 31 12 36888877775543 22334455444 4445643468999999999975 67777
Q ss_pred EEcC--CCCCCcCChHHHHHHHHHh------CCEEEEeccccccccc--cCCcCCCC--CCCcEEEeCCCCcCCCCCe-e
Q 014724 256 IAGA--SAYPRDFDYPRMRQIADAV------GALLMMDMAHISGLVA--ASVVADPF--KYCDVVTTTTHKSLRGPRG-G 322 (419)
Q Consensus 256 i~~~--s~~p~~~dl~~I~~ia~~~------ga~livD~ah~~Gl~~--~g~~~~~~--~~~Div~~S~hK~l~Gprg-G 322 (419)
++.. +..+...|+++|+++|+++ |+++++|++|+.+... .+..+..+ +++|.++.|.||++.||.| |
T Consensus 191 ~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~~~~~DSis~s~HK~~~~P~g~G 270 (431)
T TIGR01788 191 VCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFRLPRVKSINVSGHKYGLVYPGVG 270 (431)
T ss_pred EEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcCCCCceEEEECchhccCCCCCcE
Confidence 7654 3456789999999999999 9999999998644320 12222223 3789999999999889998 9
Q ss_pred EEEEeCCCcchhhHHHHhhhc--cc------CCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-
Q 014724 323 MIFFKKDPVLGVELESAINNA--VF------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL- 393 (419)
Q Consensus 323 ~i~~~~~~~~~~~l~~~i~~~--~~------~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~- 393 (419)
+++.+++. .+.+.+... .. ..+.++......++....++.+...+++++.++..+++++|.+.|++.
T Consensus 271 ~l~~r~~~----~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~ 346 (431)
T TIGR01788 271 WVIWRDEE----ALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLG 346 (431)
T ss_pred EEEEeChH----HcchhheecccccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 98888741 122222110 00 112222222222333445555555678899999999999999999987
Q ss_pred CcEEecCCCcceeEEEEeCC
Q 014724 394 GYKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 394 G~~v~~~~t~~hlv~vd~~~ 413 (419)
+|+++......++|-+.+.+
T Consensus 347 ~~el~~~~~~~~iV~Fr~~~ 366 (431)
T TIGR01788 347 PFEIISDGSGIPLVAFKLKD 366 (431)
T ss_pred CEEEeeCCCCceEEEEEeCC
Confidence 59888532456777666654
No 144
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.83 E-value=1.2e-18 Score=175.24 Aligned_cols=265 Identities=16% Similarity=0.079 Sum_probs=176.2
Q ss_pred cccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChH-HH
Q 014724 104 SLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PA 180 (419)
Q Consensus 104 ~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt-~A 180 (419)
.|+|..+++. +++.+++++.+.+... .+|+.. + ..+++ +.++++++++++ +|++++|+ ++
T Consensus 34 ~~~l~~~~~~~~~~~~~~~a~~~~~~~~--~~Y~~~----~---~~~Lr----~~ia~~~~~~~~----~I~it~G~~~~ 96 (369)
T PRK08153 34 RARIGANESGFGPSPSVIAAMREAAAEI--WKYGDP----E---NHDLR----HALAAHHGVAPE----NIMVGEGIDGL 96 (369)
T ss_pred eeEecCCCCCCCCCHHHHHHHHHHHHHh--hcCCCC----c---cHHHH----HHHHHHhCCCHH----HEEEcCCHHHH
Confidence 4688888865 5899999988765321 134421 1 12444 566777888764 47788886 57
Q ss_pred HHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCC
Q 014724 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS 260 (419)
Q Consensus 181 ~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s 260 (419)
+..++.++++|||.|++.+|.|.++..+ +...|. ++++++++ +..+|++++++.+...++|+|++++|
T Consensus 97 l~~~~~~~~~~gd~vlv~~p~y~~~~~~--------~~~~g~--~~~~vp~~--~~~~~~~~l~~~~~~~~~~~i~l~~P 164 (369)
T PRK08153 97 LGLIVRLYVEPGDPVVTSLGAYPTFNYH--------VAGFGG--RLVTVPYR--DDREDLDALLDAARRENAPLVYLANP 164 (369)
T ss_pred HHHHHHHhcCCCCEEEECCCcchHHHHH--------HHHcCC--eEEEeeCC--CCCCCHHHHHHHhcccCCcEEEEeCC
Confidence 8888888899999999999987665321 233455 44444444 23589999988776567899999999
Q ss_pred CCCC--cCChHHHHHHHHHh--CCEEEEeccccccccccCCcCCCCC--C-CcEEEeCCCCcC--CCCCeeEEEEeCCCc
Q 014724 261 AYPR--DFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFK--Y-CDVVTTTTHKSL--RGPRGGMIFFKKDPV 331 (419)
Q Consensus 261 ~~p~--~~dl~~I~~ia~~~--ga~livD~ah~~Gl~~~g~~~~~~~--~-~Div~~S~hK~l--~GprgG~i~~~~~~~ 331 (419)
+||+ ..+.+++.++++.+ |++||+|+++ ..+...+... ++. . .-++++|++|++ +|.|.||+++++
T Consensus 165 ~NPtG~~~~~~~l~~l~~~~~~~~~lI~DE~y-~~~~~~~~~~-~~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~~~--- 239 (369)
T PRK08153 165 DNPMGSWHPAADIVAFIEALPETTLLVLDEAY-CETAPAGAAP-PIDTDDPNVIRMRTFSKAYGLAGARVGYAIGAP--- 239 (369)
T ss_pred CCCCCCCCCHHHHHHHHHhCCCCcEEEEeCch-hhhcCcccch-hhhhcCCCEEEEecchHhccCcchheeeeecCH---
Confidence 9985 55666666666543 8999999995 4444333221 222 2 237899999997 688999999976
Q ss_pred chhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeEEEEe
Q 014724 332 LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDL 411 (419)
Q Consensus 332 ~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~vd~ 411 (419)
++.+.+.....++ + .+.....++..++.. .+..++..+++.++++.+.+.|++.|+.+.+ ...+++|+++
T Consensus 240 ---~~~~~l~~~~~~~--~-~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~~~~~L~~~g~~~~p--~~~~f~~~~~ 309 (369)
T PRK08153 240 ---GTIKAFDKVRNHF--G-MNRIAQAAALAALKD--QAYLAEVVGKIAAARDRIAAIARANGLTPLP--SATNFVAIDC 309 (369)
T ss_pred ---HHHHHHHHhhcCC--C-CCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCccCC--CcCcEEEEEC
Confidence 5666655433222 1 222233333334431 1224566777888899999999988987654 4567889987
Q ss_pred C
Q 014724 412 R 412 (419)
Q Consensus 412 ~ 412 (419)
.
T Consensus 310 ~ 310 (369)
T PRK08153 310 G 310 (369)
T ss_pred C
Confidence 5
No 145
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.82 E-value=2.5e-18 Score=175.05 Aligned_cols=279 Identities=14% Similarity=0.111 Sum_probs=170.3
Q ss_pred hhcccccccCCC--ChHHHHHHHhhhhhcc----CCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecC
Q 014724 102 FKSLELIASENF--TSRAVMEAVGSCLTNK----YSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPL 175 (419)
Q Consensus 102 ~~~i~L~~sen~--~~~~V~eal~~~l~~~----y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~ 175 (419)
.+.++|..+++. +++.+.+++.+.+... ...+|+. ..|. .++++.+.+++.+..|.+.+. .+|+++
T Consensus 34 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~---~~LR~aia~~~~~~~g~~~~~--~~I~it 105 (409)
T PRK07590 34 AKIIRLGIGDVTQPLPPAVIEAMHKAVDEMGTAETFRGYGP---EQGY---DFLREKIAENDYQARGCDISA--DEIFIS 105 (409)
T ss_pred CceEEecCcCCCCCCCHHHHHHHHHHHhcccccCCccCCCC---CCCC---HHHHHHHHHHHHHhcCCcCCh--hhEEEC
Confidence 346888877754 5788888888776531 1123421 1233 356666666666555544321 247778
Q ss_pred ChH-HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccc---------cEEEecccCCC-CCCCCHHHHH
Q 014724 176 SGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY---------FESMPYRLDES-TGLVDYDMLE 244 (419)
Q Consensus 176 sGt-~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~---------~~~v~~~~~~~-~~~iD~d~Le 244 (419)
+|+ +|+..+ ..+++|||+|++.+|.|..+.. .+...|.. .++++++++++ ++.+|++
T Consensus 106 ~Ga~~al~~l-~~~~~~gd~V~v~~P~Y~~~~~--------~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~--- 173 (409)
T PRK07590 106 DGAKCDTGNI-LDIFGPDNTIAVTDPVYPVYVD--------TNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELP--- 173 (409)
T ss_pred CCHHHHHHHH-HHhcCCCCEEEEeCCCCcchHH--------HHHHcCCcccccccccccceeEeecccccCCcccCc---
Confidence 886 577664 5667999999999999876642 12233432 12455555532 3445432
Q ss_pred HHhhhcCCeEEEEcCCCCCC--cC---ChHHHHHHHHHhCCEEEEeccccccccccCCcCCCC---CC---CcEEEeCCC
Q 014724 245 KTAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KY---CDVVTTTTH 313 (419)
Q Consensus 245 ~~l~~~~pklIi~~~s~~p~--~~---dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~---~~---~Div~~S~h 313 (419)
+.++|+|++++|+||+ .. .+++|.++|++||++||+|++| ..+.+.+..+.++ ++ .-|+++|+|
T Consensus 174 ----~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y-~~~~~~~~~~~~~~~~~~~~~~vi~~~SfS 248 (409)
T PRK07590 174 ----EEKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAY-EAFISDPSLPHSIYEIEGARECAIEFRSFS 248 (409)
T ss_pred ----ccCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccc-hhhccCCCCCcchhhCCCcccceEEEecCc
Confidence 2478999998999995 23 4678888899999999999995 4555433222222 22 126789999
Q ss_pred CcC--CCCCeeEEEEeCCCcchhhHHHH------------hhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHH
Q 014724 314 KSL--RGPRGGMIFFKKDPVLGVELESA------------INNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKV 379 (419)
Q Consensus 314 K~l--~GprgG~i~~~~~~~~~~~l~~~------------i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v 379 (419)
|+| +|.|.||+++++ ++.+. .......... +.+.....++..++..-.....++..+++
T Consensus 249 K~~~~pGlRiG~~i~~~------~li~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~~q~a~~~~l~~~~~~~~~~~~~~~ 321 (409)
T PRK07590 249 KTAGFTGTRCAYTVVPK------ELKGKTSDGEGVSLNSLWNRRQSTKFN-GVSYIVQRAAEAVYSPEGKAQIKELIDYY 321 (409)
T ss_pred cccCCcCceeEEEEcCH------HHhhhccccchhhhHHHHHHHHhhccc-CcCHHHHHHHHHHhcCCcHHHHHHHHHHH
Confidence 987 789999999987 34431 1111111111 12222222333334321112345667778
Q ss_pred HHHHHHHHHHHHhCCcEEecCCCcceeEEEEeCC
Q 014724 380 VSNCRALASRLVELGYKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 380 ~~n~~~l~~~L~~~G~~v~~~~t~~hlv~vd~~~ 413 (419)
.++++.+.+.|++.|+++.. +....++|+++.+
T Consensus 322 ~~~r~~l~~~L~~~~~~~~~-~~g~~f~wi~~~~ 354 (409)
T PRK07590 322 MENAKIIREGLESAGFEVYG-GVNAPYIWVKTPD 354 (409)
T ss_pred HHHHHHHHHHHHhcCCceec-CCcceEEEEECCC
Confidence 88899999999999987764 3456789999865
No 146
>PLN02672 methionine S-methyltransferase
Probab=99.82 E-value=8.8e-19 Score=192.41 Aligned_cols=280 Identities=11% Similarity=0.047 Sum_probs=183.7
Q ss_pred hhcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHH
Q 014724 102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP 179 (419)
Q Consensus 102 ~~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~ 179 (419)
.+.|.|..+++. +|+.|++++.+.+.. +.. + .|.. ++.+.+++++++.+|++.+.. .+|++++|+.
T Consensus 697 ~~vI~LsinE~d~ppPp~V~eAi~eal~~-~~~-s------~g~p---dlr~aLa~~la~~~Gv~~d~~-e~IIvt~Gs~ 764 (1082)
T PLN02672 697 SSLIHMDVDESFLPVPSAVKASIFESFVR-QNI-S------ESET---DPRPSILQFIKSNYGFPTDSC-TEFVYGDTSL 764 (1082)
T ss_pred CCEEEEeCCCCCCCCCHHHHHHHHHHHhh-cCC-C------CCCh---HHHHHHHHHHHHHhCcCCCCC-CEEEEeCCHH
Confidence 456888888865 689999999876642 211 0 1111 234466788999999986421 2477788865
Q ss_pred -HHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCC-CCCCCCHHHHHHHhhhcCCeEEEE
Q 014724 180 -ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKLIIA 257 (419)
Q Consensus 180 -A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~-~~~~iD~d~Le~~l~~~~pklIi~ 257 (419)
++..++.++++|||.|++++|.|+.+.. .+...|. +++++++++ +++.+|++.+++.++..+.++|++
T Consensus 765 elL~lll~aLl~pGD~VLVp~PtY~~Y~~--------~a~~~Ga--~vv~Vpl~~e~gf~lD~d~Le~al~~~~~~~I~L 834 (1082)
T PLN02672 765 ALFNKLVLCCVQEGGTLCFPAGSNGTYVS--------AAKFLKA--NFRRIPTKSSDGFKLTAKTLASTLETVKKPWVYI 834 (1082)
T ss_pred HHHHHHHHHHcCCCCEEEEeCCChHHHHH--------HHHHcCC--EEEEEecccccCCCCCHHHHHHHhccCCCCEEEE
Confidence 7778889999999999999998877642 2345666 444444543 357899999999986433457777
Q ss_pred cCCC-CCC--c---CChHHHHHHHHHhCCEEEEeccccccccccCCcC--CCC-------CC-----CcEEEeCCCCcC-
Q 014724 258 GASA-YPR--D---FDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPF-------KY-----CDVVTTTTHKSL- 316 (419)
Q Consensus 258 ~~s~-~p~--~---~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~--~~~-------~~-----~Div~~S~hK~l- 316 (419)
++|+ ||+ . .++++|.++|++||++||+|++| .++.+.+... .++ +. .-++++|+||.+
T Consensus 835 ~nPnhNPTG~v~S~eeLe~Llela~k~di~VIsDEaY-sdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~ 913 (1082)
T PLN02672 835 SGPTINPTGLLYSNSEIEEILSVCAKYGARVIIDTSF-SGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELL 913 (1082)
T ss_pred ECcCCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCC-CccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhc
Confidence 7776 985 2 35788899999999999999994 5666543211 011 11 126788999875
Q ss_pred -CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHH-HHHHHhcC----hHHHHHHHHHHHHHHHHHHHH
Q 014724 317 -RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLA-VCLKHAQS----PEFKVYQNKVVSNCRALASRL 390 (419)
Q Consensus 317 -~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala-~al~~~~~----~~~~~~~~~v~~n~~~l~~~L 390 (419)
+|+|.||++++++ ++.+.+.... ...+....+..++.+ .++..... ...+++++.+.++++++.+.|
T Consensus 914 lpGLRIGylIap~~-----eLi~~l~~~~--~~s~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L 986 (1082)
T PLN02672 914 SGGHEFGFLALNDS-----VLIDAFHSAP--GLSRPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETL 986 (1082)
T ss_pred cHHHHheeEEeCCH-----HHHHHHHHhh--hhcCCCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999763 4666665421 111111122222211 11111001 123566677889999999999
Q ss_pred HhCCcEEecCCCcceeEEEEeC
Q 014724 391 VELGYKLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 391 ~~~G~~v~~~~t~~hlv~vd~~ 412 (419)
++.|+++.. ...+.++|++++
T Consensus 987 ~~~Gi~v~~-PeGGFfLwl~l~ 1007 (1082)
T PLN02672 987 EACGWDVLE-PQGGISMVAKPS 1007 (1082)
T ss_pred HHCCCeEec-CCcEEEEEEEcc
Confidence 999998765 345677888875
No 147
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.82 E-value=8.2e-19 Score=176.62 Aligned_cols=274 Identities=14% Similarity=0.108 Sum_probs=172.0
Q ss_pred cccccccCCC--ChHHHHHHHhhhhhccC-CCCCCCCCCCCchhHHHHHHHHHHHHHHHHcC----CCCCCCceeEecCC
Q 014724 104 SLELIASENF--TSRAVMEAVGSCLTNKY-SEGLPGKRYYGGNEYIDELETLCQKRALAAFN----LDENKWGVNVQPLS 176 (419)
Q Consensus 104 ~i~L~~sen~--~~~~V~eal~~~l~~~y-~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g----~~~~~~~v~V~~~s 176 (419)
-+.|..+++. +|+.+++++.+.+.... ..+||. .|. .++++.+.+++.+.++ ++++ +|++++
T Consensus 30 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~----~G~---~~Lr~aia~~~~~~~~~~~~v~~~----~I~it~ 98 (374)
T PRK02610 30 LDRLDTNEFPYDLPPDLKQKLAWLYQQGIESNRYPD----GGH---EALKQAIAEYVNESAAGSSQITPA----NISVGN 98 (374)
T ss_pred eeEecCCCCCCCCCHHHHHHHHHHHhhcccccCCCC----Cch---HHHHHHHHHHhCccccccCCCCHH----HEEEcC
Confidence 4677777764 68999999988665422 123442 232 3555555455544432 4443 477788
Q ss_pred hH-HHHHHHHHHccCCCC-EEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhh---cC
Q 014724 177 GS-PANFEVYTAILKPHD-RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---FR 251 (419)
Q Consensus 177 Gt-~A~~~~~~all~pGD-~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~---~~ 251 (419)
|+ +|+..++.+++.+|| +|++.+|.|..+.. .+...|. +++.++.+++++.+|+++|++.++. .+
T Consensus 99 Ga~~al~~~~~~~~~~g~~~Vlv~~P~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~ 168 (374)
T PRK02610 99 GSDELIRSLLIATCLGGEGSILVAEPTFSMYGI--------LAQTLGI--PVVRVGRDPETFEIDLAAAQSAIEQTQNPP 168 (374)
T ss_pred ChHHHHHHHHHHHcCCCCCeEEEcCCChHHHHH--------HHHHcCC--EEEEecCCcccCCCCHHHHHHHHHhhcCCC
Confidence 75 588878888888886 89999998766532 2344565 5555555544578999999998865 57
Q ss_pred CeEEEEcCCCCCC--cCChHHHHHHHH-HhCCEEEEeccccccccccCCcCCCCC-CC-cEEEeCCCCcC--CCCCeeEE
Q 014724 252 PKLIIAGASAYPR--DFDYPRMRQIAD-AVGALLMMDMAHISGLVAASVVADPFK-YC-DVVTTTTHKSL--RGPRGGMI 324 (419)
Q Consensus 252 pklIi~~~s~~p~--~~dl~~I~~ia~-~~ga~livD~ah~~Gl~~~g~~~~~~~-~~-Div~~S~hK~l--~GprgG~i 324 (419)
+|+|++++|+||+ ..+.+++.++++ .++++||+|+++ ..+...... ..+. +. -|+++|++|+| +|.|.||+
T Consensus 169 ~k~i~l~~P~NPTG~~~s~~~l~~l~~~~~~~~iI~De~Y-~~~~~~~~~-~~~~~~~~~ivi~SfSK~~g~~GlRiG~~ 246 (374)
T PRK02610 169 VRVVFVVHPNSPTGNPLTAAELEWLRSLPEDILVVIDEAY-FEFSQTTLV-GELAQHPNWVILRTFSKAFRLAAHRVGYA 246 (374)
T ss_pred ceEEEEeCCCCCCCCCCCHHHHHHHHhccCCcEEEEeccc-cccCccchH-HHHhcCCCEEEEEecchhccCcccceeee
Confidence 9999999999995 345555544443 148999999995 343321110 1111 22 27899999987 89999999
Q ss_pred EEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEEecCCCc
Q 014724 325 FFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSD 403 (419)
Q Consensus 325 ~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~~~~t~ 403 (419)
++++ ++.+.+.....++ +.+..... +...++... +.+.+..+++.+.++.+.+.|++. |+.+.+ +.
T Consensus 247 v~~~------~l~~~l~~~~~~~--~~~~~~q~-a~~~~l~~~--~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p--~~ 313 (374)
T PRK02610 247 IGHP------ELIAVLEKVRLPY--NLPSFSQL-AAQLALEHR--QELLAAIPEILQERDRLYQALQELPQLRVWP--SA 313 (374)
T ss_pred ecCH------HHHHHHHHhcCCC--CCCHHHHH-HHHHHhcCH--HHHHHHHHHHHHHHHHHHHHHHhCCCcEeCC--Cc
Confidence 9876 6777766543322 12222222 223334321 233344455566677788888776 777654 34
Q ss_pred ceeEEEEeCC
Q 014724 404 NHLVLVDLRP 413 (419)
Q Consensus 404 ~hlv~vd~~~ 413 (419)
..++|+++..
T Consensus 314 g~f~~~~l~~ 323 (374)
T PRK02610 314 ANFLYLRLSQ 323 (374)
T ss_pred ceEEEEeCCC
Confidence 5679998854
No 148
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.82 E-value=1.1e-18 Score=177.31 Aligned_cols=213 Identities=23% Similarity=0.238 Sum_probs=150.1
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccc
Q 014724 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (419)
Q Consensus 142 g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g 221 (419)
+++..+++| +++++++|.+. .+.++||+.|+.+++.++++|||+|++..+.|++...... ..+...|
T Consensus 58 ~~p~~~~Le----~~lA~l~g~~~-----~v~~~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~----~~~~~~g 124 (405)
T PRK08776 58 GNPTRDLLG----EALAELEGGAG-----GVITATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFN----ALAKKGH 124 (405)
T ss_pred CChHHHHHH----HHHHHHhCCCc-----eEEEcCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHHHH----HHHHhcC
Confidence 344455666 67788888754 3788999999999999999999999999988876421100 0011223
Q ss_pred cccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcC
Q 014724 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (419)
Q Consensus 222 ~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~ 299 (419)
.+++.++ ..|++++++.+++ ++|+|++++|+||+ ..|+++|.++|+++|++|++|++|..+.. .
T Consensus 125 --~~v~~v~------~~d~~~l~~~i~~-~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~a~~~~-----~ 190 (405)
T PRK08776 125 --FALITAD------LTDPRSLADALAQ-SPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLSPAL-----Q 190 (405)
T ss_pred --cEEEEEC------CCCHHHHHHhcCc-CCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence 3444432 2589999998864 79999999999984 67999999999999999999999865432 2
Q ss_pred CCCC-CCcEEEeCCCCcCCCCC---eeEEEEeCCCcchhhHHHHhhhcc-cCCCCCCChHHHHHHHHHHHHHhcChHHHH
Q 014724 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAV-FPGLQGGPHNHTIGGLAVCLKHAQSPEFKV 374 (419)
Q Consensus 300 ~~~~-~~Div~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~-~~~~~g~p~~~~iaala~al~~~~~~~~~~ 374 (419)
.|++ ++|++++|.||+|.|+. +|+++++++ ++.+++.... ..+...+| +.+. ..+..+ +.++.
T Consensus 191 ~pl~~gaDivv~S~tK~l~g~~~~~~G~vv~~~~-----~l~~~l~~~~~~~g~~~s~----~~a~-l~~~gl--~tl~~ 258 (405)
T PRK08776 191 KPLEFGADLVLHSTTKYINGHSDVVGGAVVARDA-----ELHQQLVWWANALGLTGSP----FDAF-LTLRGL--RTLDA 258 (405)
T ss_pred CcccccCCEEEecCceeecCCCCceEEEEEeCCH-----HHHHHHHHHHHhcCCCCCH----HHHH-HHHhhh--CcHHH
Confidence 4555 79999999999998774 688877664 6666654321 11221111 2221 122332 24677
Q ss_pred HHHHHHHHHHHHHHHHHhC
Q 014724 375 YQNKVVSNCRALASRLVEL 393 (419)
Q Consensus 375 ~~~~v~~n~~~l~~~L~~~ 393 (419)
+.+++.+|+..+++.|++.
T Consensus 259 r~~~~~~na~~la~~L~~~ 277 (405)
T PRK08776 259 RLRVHQENADAIAALLDGH 277 (405)
T ss_pred HHHHHHHHHHHHHHHHHcC
Confidence 8899999999999999986
No 149
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.82 E-value=6.5e-19 Score=178.22 Aligned_cols=243 Identities=24% Similarity=0.265 Sum_probs=159.9
Q ss_pred CCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccC
Q 014724 111 ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK 190 (419)
Q Consensus 111 en~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~ 190 (419)
..+..+.+.++........ .++..+|+ +++..+++| +++++++|.+. + +.++||+.|+..++.++++
T Consensus 32 ~~~~~~~~~~~~~~~~~~~--~~~~y~r~--~~p~~~~le----~~la~l~g~~~----~-v~~ssG~~Ai~~al~al~~ 98 (390)
T PRK08133 32 SSFVFESAAEAAARFAGEE--PGNIYSRF--TNPTVTMFQ----ERLAALEGAEA----C-VATASGMAAILAVVMALLQ 98 (390)
T ss_pred CCcccCCHHHHHHhhcCCc--CCceeECC--CChHHHHHH----HHHHHHhCCCc----E-EEECCHHHHHHHHHHHHhC
Confidence 3454555555544332211 23444443 345556666 67888999875 2 6788999999999999999
Q ss_pred CCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCCh
Q 014724 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDY 268 (419)
Q Consensus 191 pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~dl 268 (419)
|||+|++.++.|++.+.... ..+...|. ++..++. .|++++++.+++ ++|+|++++|+||+ ..|+
T Consensus 99 ~Gd~Vi~~~~~y~~t~~~~~----~~~~~~G~--~v~~vd~------~d~~~l~~~i~~-~tklV~ie~p~NptG~v~dl 165 (390)
T PRK08133 99 AGDHVVSSRSLFGSTVSLFE----KIFARFGI--ETTFVDL------TDLDAWRAAVRP-NTKLFFLETPSNPLTELADI 165 (390)
T ss_pred CCCEEEEccCcchhHHHHHH----HHHHHcCc--EEEEECC------CCHHHHHHhcCc-CCeEEEEECCCCCCCCcCCH
Confidence 99999999988877542110 01123444 4555433 278999998874 79999999998884 6799
Q ss_pred HHHHHHHHHhCCEEEEeccccccccccCCcCCCCC-CCcEEEeCCCCcCCCC--C-eeEEEEeCCCcchhhHHHHhhhcc
Q 014724 269 PRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLRGP--R-GGMIFFKKDPVLGVELESAINNAV 344 (419)
Q Consensus 269 ~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~-~~Div~~S~hK~l~Gp--r-gG~i~~~~~~~~~~~l~~~i~~~~ 344 (419)
++|.++|+++|+++++|+++..+.. ..|++ ++|++++|+||++.|+ + ||+++.++ ++.+++....
T Consensus 166 ~~I~~la~~~gi~livD~t~~~~~~-----~~pl~~g~Divv~S~sK~~~g~g~~~GG~vv~~~------~~~~~~~~~~ 234 (390)
T PRK08133 166 AALAEIAHAAGALLVVDNCFCTPAL-----QQPLKLGADVVIHSATKYLDGQGRVLGGAVVGSK------ELMEEVFGFL 234 (390)
T ss_pred HHHHHHHHHcCCEEEEECCCccccc-----CCchhhCCcEEEeecceeecCCcceEeEEEEcCH------HHHHHHHHHH
Confidence 9999999999999999999765432 23444 7899999999998654 3 58888776 3434332211
Q ss_pred cCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcE
Q 014724 345 FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYK 396 (419)
Q Consensus 345 ~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~ 396 (419)
... | +......+. .+++.+ +.+..+.+++.+|+..++++|+++ ++.
T Consensus 235 ~~~--g-~~~~~~~a~-~~l~gl--~tl~~R~~~~~~~a~~la~~L~~~p~v~ 281 (390)
T PRK08133 235 RTA--G-PTLSPFNAW-VFLKGL--ETLSLRMEAHSANALALAEWLEAHPGVE 281 (390)
T ss_pred HHh--C-CCCCHHHHH-HHHccc--chHHHHHHHHHHHHHHHHHHHHhCCCee
Confidence 111 1 111112221 123332 246677788889999999999986 553
No 150
>PRK05968 hypothetical protein; Provisional
Probab=99.82 E-value=6.7e-19 Score=178.08 Aligned_cols=231 Identities=19% Similarity=0.129 Sum_probs=158.5
Q ss_pred hhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCcccccccccccccc
Q 014724 143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 222 (419)
Q Consensus 143 ~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~ 222 (419)
++.+.++| +++++++|.+. .+.++||+.|+..++.++++|||+|++..+.|++.+.... ..+...|.
T Consensus 62 ~p~~~~le----~~lA~l~g~~~-----av~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~----~~~~~~G~ 128 (389)
T PRK05968 62 NPTVRAFE----EMLAKLEGAED-----ARGFASGMAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFE----TILKRMGV 128 (389)
T ss_pred ChhHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHH----HHHHHcCc
Confidence 45566777 57888999876 2677999999999999999999999999988876532110 11223354
Q ss_pred ccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcCC
Q 014724 223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD 300 (419)
Q Consensus 223 ~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~ 300 (419)
++..++. .|++++++.+. ++|+|++++|.++. ..|+++|.++|+++|+++++|++|..+... .
T Consensus 129 --~v~~vd~------~d~~~l~~~i~--~tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD~a~a~~~~~-----~ 193 (389)
T PRK05968 129 --EVDYVDG------RDEEAVAKALP--GAKLLYLESPTSWVFELQDVAALAALAKRHGVVTMIDNSWASPVFQ-----R 193 (389)
T ss_pred --eEEEeCC------CCHHHHHHhcc--cCCEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcchhcc-----C
Confidence 4444322 38899998873 68999999888774 468999999999999999999998665421 2
Q ss_pred CCC-CCcEEEeCCCCcCCCC---CeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHH
Q 014724 301 PFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQ 376 (419)
Q Consensus 301 ~~~-~~Div~~S~hK~l~Gp---rgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~ 376 (419)
++. ++|++++|+||++.|| +||+++.++ ++.+++.....+.+.+..+ ...+++ .+..+. .+..+.
T Consensus 194 p~~~g~Divv~S~tK~l~g~~~~~gG~i~~~~------~~~~~l~~~~~~~~g~~~~-~~~A~~--~l~~L~--tl~~r~ 262 (389)
T PRK05968 194 PITLGVDLVIHSASKYLGGHSDTVAGVVAGSK------EHIARINAEAYPYLGAKLS-PFEAWL--LLRGLR--TLPLRM 262 (389)
T ss_pred chhcCCcEEEeeccccccCCCCeEEEEEEECH------HHHHHHHHHHHHhCCCCCC-hHHHHH--HHcccC--cHHHHH
Confidence 344 7899999999999875 578888776 5666555432222211222 122222 233332 356778
Q ss_pred HHHHHHHHHHHHHHHhC-CcEEec-CCCcce----------eEEEEeC
Q 014724 377 NKVVSNCRALASRLVEL-GYKLVS-GGSDNH----------LVLVDLR 412 (419)
Q Consensus 377 ~~v~~n~~~l~~~L~~~-G~~v~~-~~t~~h----------lv~vd~~ 412 (419)
++..+++++++++|++. +++.+. .+..+| ++.+++.
T Consensus 263 ~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~ 310 (389)
T PRK05968 263 KAHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFR 310 (389)
T ss_pred HHHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEEC
Confidence 88899999999999986 564332 333333 6777765
No 151
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.82 E-value=7.7e-19 Score=177.30 Aligned_cols=212 Identities=19% Similarity=0.183 Sum_probs=150.0
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccc
Q 014724 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (419)
Q Consensus 142 g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g 221 (419)
+++...++| +.+++++|.+. + +.++||+.|+..++.++++|||+|+++++.|+++.... +.+...|
T Consensus 51 ~np~~~~lE----~~lA~l~g~~~----~-l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~-----~~~~~~g 116 (385)
T PRK08574 51 ENPTLRPLE----EALAKLEGGVD----A-LAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLL-----KSLEKFG 116 (385)
T ss_pred CCccHHHHH----HHHHHHhCCCc----E-EEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHH-----HHhhccC
Confidence 445567777 56888899765 3 67889999999999999999999999999887754211 0111223
Q ss_pred cccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcC
Q 014724 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (419)
Q Consensus 222 ~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~ 299 (419)
. ++..+ .+|++++++++++.++|+|+++.++||+ ..|+++|+++|+++|++|++|++|..|+..
T Consensus 117 ~--~v~~~-------~~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD~t~a~~~~~----- 182 (385)
T PRK08574 117 V--KVVLA-------YPSTEDIIEAIKEGRTKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVDNTFATPLLY----- 182 (385)
T ss_pred c--EEEEE-------CCCHHHHHHhcCccCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccC-----
Confidence 2 32221 2578999999875578999999999985 579999999999999999999998777542
Q ss_pred CCCC-CCcEEEeCCCCcCCCCC---eeEEEEeCCCcchhhHHHHhhhccc-CCCCCCChHHHHHHHHHHHHHhcChHHHH
Q 014724 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVF-PGLQGGPHNHTIGGLAVCLKHAQSPEFKV 374 (419)
Q Consensus 300 ~~~~-~~Div~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~-~~~~g~p~~~~iaala~al~~~~~~~~~~ 374 (419)
.+++ ++|++++|+||++.|+. ||+++++++ ++.+++..... .+..-+| ..+ +.++..+. .+..
T Consensus 183 ~~l~~GaDivv~S~sK~l~g~~d~~gG~vi~~~~-----~~~~~~~~~~~~~g~~~~p---~~a--~l~l~~l~--tL~~ 250 (385)
T PRK08574 183 RPLRHGADFVVHSLTKYIAGHNDVVGGVAVAWSG-----EFLEELWEWRRRLGTIMQP---FEA--YLVLRGLK--TLEV 250 (385)
T ss_pred ChhhhCCcEEEeeCceeecCCCCceeEEEEECcH-----HHHHHHHHHHHhcCCCCCH---HHH--HHHHcccC--cHHH
Confidence 2344 79999999999998873 686767654 56565543221 1111111 112 22333332 3567
Q ss_pred HHHHHHHHHHHHHHHHHhC
Q 014724 375 YQNKVVSNCRALASRLVEL 393 (419)
Q Consensus 375 ~~~~v~~n~~~l~~~L~~~ 393 (419)
+.++..+|+.+++++|++.
T Consensus 251 R~~~~~~na~~la~~L~~~ 269 (385)
T PRK08574 251 RFERQCRNAMAIAEFLSEH 269 (385)
T ss_pred HHHHHHHHHHHHHHHHHcC
Confidence 7888899999999999886
No 152
>PRK09265 aminotransferase AlaT; Validated
Probab=99.82 E-value=8.3e-18 Score=171.00 Aligned_cols=283 Identities=14% Similarity=0.081 Sum_probs=170.4
Q ss_pred hhcccccccC-C---C-ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHc--CCCCCCCceeEec
Q 014724 102 FKSLELIASE-N---F-TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAF--NLDENKWGVNVQP 174 (419)
Q Consensus 102 ~~~i~L~~se-n---~-~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~--g~~~~~~~v~V~~ 174 (419)
.+.++|..++ + + +++.+.+++.+.+... .+|+.. .|. .++.+.+.+++.... +++++ +|++
T Consensus 33 ~~~i~l~~g~p~~~~~~~~~~i~~~~~~~~~~~--~~Y~~~---~G~---~~lr~~ia~~~~~~~~~~~~~~----~i~~ 100 (404)
T PRK09265 33 HKILKLNIGNPAPFGFEAPDEILRDVIRNLPTA--QGYSDS---KGL---FSARKAIMQYYQQKGIPDVDVD----DIYI 100 (404)
T ss_pred CCeEEecCCCCCcCCCCCCHHHHHHHHHHhhcC--CCCCCC---CCc---HHHHHHHHHHHhccCCCCCCcc----cEEE
Confidence 3558887643 2 2 5788888887765432 244431 232 245444444443222 45553 4667
Q ss_pred CChH-HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCC-CCCCCCHHHHHHHhhhcCC
Q 014724 175 LSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRP 252 (419)
Q Consensus 175 ~sGt-~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~-~~~~iD~d~Le~~l~~~~p 252 (419)
++|+ +++..++.++++|||+|++++|+|..+.. .+...|. +.+.++.+. +++.+|++++++.+.+ ++
T Consensus 101 t~G~~~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~--------~~~~~g~--~~v~~~~~~~~~~~~d~~~l~~~~~~-~~ 169 (404)
T PRK09265 101 GNGVSELIVMAMQALLNNGDEVLVPAPDYPLWTA--------AVSLSGG--KPVHYLCDEEAGWFPDLDDIRSKITP-RT 169 (404)
T ss_pred eCChHHHHHHHHHHhCCCCCEEEEeCCCCcChHH--------HHHHcCC--EEEEEecccccCCCCCHHHHHHhccc-cc
Confidence 7775 68889999999999999999998865431 1223444 444444443 3567999999998864 78
Q ss_pred eEEEEcCCCCCC--cCC---hHHHHHHHHHhCCEEEEeccccccccccCCcCCCC---C-CCc-EEEeCCCCcC--CCCC
Q 014724 253 KLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K-YCD-VVTTTTHKSL--RGPR 320 (419)
Q Consensus 253 klIi~~~s~~p~--~~d---l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~---~-~~D-iv~~S~hK~l--~Gpr 320 (419)
++|++++|+||+ ..+ +++|.++|+++|++||+|+++ .++.+.+....++ . ... ++++|++|+| +|.|
T Consensus 170 ~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlR 248 (404)
T PRK09265 170 KAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIY-DKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFR 248 (404)
T ss_pred eEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhh-hhccCCCCCcCCHHHcCCCceEEEEecchhhccCcccc
Confidence 999988999985 355 888999999999999999995 4555443211111 1 222 5689999987 7889
Q ss_pred eeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHH---HHHHHHHHHHHHHHHHhC-CcE
Q 014724 321 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY---QNKVVSNCRALASRLVEL-GYK 396 (419)
Q Consensus 321 gG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~---~~~v~~n~~~l~~~L~~~-G~~ 396 (419)
.||++.........++.+.+..... ...+.+.. ...++..+|... +.++.+ .+++.++++.+.+.|++. |++
T Consensus 249 iG~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~q~~~~~~l~~~--~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~ 324 (404)
T PRK09265 249 VGWMVLSGPKKHAKGYIEGLDMLAS-MRLCANVP-AQHAIQTALGGY--QSINELILPGGRLYEQRDRAWELLNAIPGVS 324 (404)
T ss_pred eEEEEEeCchHHHHHHHHHHHHHhc-cccCCCcH-HHHHHHHHhcCc--hhHHHHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 9999974211000013333321111 11112222 222333344211 122222 246777788899999886 777
Q ss_pred EecCCCcceeEEEEeCC
Q 014724 397 LVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 397 v~~~~t~~hlv~vd~~~ 413 (419)
+... ..+.++|+++..
T Consensus 325 ~~~p-~~g~~l~~~~~~ 340 (404)
T PRK09265 325 CVKP-KGALYAFPKLDP 340 (404)
T ss_pred ccCC-CcceEEEEEecc
Confidence 6542 446778988864
No 153
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.82 E-value=6.2e-19 Score=178.78 Aligned_cols=215 Identities=20% Similarity=0.209 Sum_probs=148.4
Q ss_pred hhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCcccccccccccccc
Q 014724 143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 222 (419)
Q Consensus 143 ~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~ 222 (419)
++..+++| +++++++|.+.. +.+.||+.|+..++.++++|||+|+++++.|+++..... ......|.
T Consensus 64 ~p~~~~Le----~~lA~l~G~~~~-----~~~~sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~----~~~~~~G~ 130 (398)
T PRK07504 64 NPTVDMFE----KRMCALEGAEDA-----RATASGMAAVTAAILCQVKAGDHVVAARALFGSCRYVVE----TLLPRYGI 130 (398)
T ss_pred CchHHHHH----HHHHHHhCCCee-----eEecCHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHH----HHHhhcCe
Confidence 34456666 678889999873 457899999998888899999999999988877532110 00112343
Q ss_pred ccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcCC
Q 014724 223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD 300 (419)
Q Consensus 223 ~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~ 300 (419)
++..++ .+|++++++.+++ ++|+|++++|+||+ ..|+++|.++|+++|+++++|++|..+.. ..
T Consensus 131 --~v~~vd------~~d~e~l~~ai~~-~tklV~lesp~NptG~v~dl~~I~~la~~~gi~lvvD~a~a~~~~-----~~ 196 (398)
T PRK07504 131 --ESTLVD------GLDLDNWEKAVRP-NTKVFFLESPTNPTLEVIDIAAVAKIANQAGAKLVVDNVFATPLF-----QK 196 (398)
T ss_pred --EEEEEC------CCCHHHHHHhcCc-CceEEEEECCCCCCcEecCHHHHHHHHHHcCCEEEEECCcccccc-----CC
Confidence 444432 3799999999864 79999999999984 67999999999999999999999876643 23
Q ss_pred CCC-CCcEEEeCCCCcCCCC--C-eeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHH
Q 014724 301 PFK-YCDVVTTTTHKSLRGP--R-GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQ 376 (419)
Q Consensus 301 ~~~-~~Div~~S~hK~l~Gp--r-gG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~ 376 (419)
+++ ++|++++|+||+|.|+ + ||+++++++ .+.+.+...... .|. .+..+.| +.++..+. .+..+.
T Consensus 197 ~~~~gaDivv~S~sK~l~g~g~~~GG~vv~~~~-----~i~~~~~~~~~~--~g~-~~s~~~A-~~~l~~L~--tl~~R~ 265 (398)
T PRK07504 197 PLELGAHIVVYSATKHIDGQGRCLGGVVLSDKA-----WIEEHLQDYFRH--TGP-SLSPFNA-WTLLKGLE--TLPVRV 265 (398)
T ss_pred chhhCCCEEEeeccccccCCccceEEEEEeCcH-----HHHHHHHHHHHH--hCC-CCCHHHH-HHHHhccc--hHHHHH
Confidence 444 7999999999999654 4 578887763 232333321111 111 1111222 12333332 356778
Q ss_pred HHHHHHHHHHHHHHHhC-Cc
Q 014724 377 NKVVSNCRALASRLVEL-GY 395 (419)
Q Consensus 377 ~~v~~n~~~l~~~L~~~-G~ 395 (419)
++..+|++.++++|++. ++
T Consensus 266 ~~~~~na~~la~~L~~~p~v 285 (398)
T PRK07504 266 RQQTESAAAIADFLAGHPKV 285 (398)
T ss_pred HHHHHHHHHHHHHHHcCCCc
Confidence 88889999999999986 55
No 154
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.82 E-value=5.3e-19 Score=178.68 Aligned_cols=218 Identities=18% Similarity=0.147 Sum_probs=148.3
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccc
Q 014724 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (419)
Q Consensus 142 g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g 221 (419)
+++...+|| +.+++++|.+. .+.++||+.|+..++.++++|||+|+++++.|++.+... . ......|
T Consensus 59 ~~pt~~~Le----~~lA~l~G~~~-----al~~~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~--~--~~~~~~g 125 (386)
T PRK06767 59 GNPTVKLFE----ERMAVLEGGEE-----ALAFGSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFL--E--VLEEKFM 125 (386)
T ss_pred CCcchHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHH--H--HHHhhcC
Confidence 345456777 57888999764 378899999999999999999999999998876654210 0 0001112
Q ss_pred cccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcC
Q 014724 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (419)
Q Consensus 222 ~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~ 299 (419)
. +...+ ...|++++++.+++ ++|+|++++|+||+ ..|+++|.++|+++|+++++|++|..+.. .
T Consensus 126 i--~~~~~------~~~d~~~l~~~i~~-~tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD~a~a~~~~-----~ 191 (386)
T PRK06767 126 I--THSFC------DMETEADIENKIRP-NTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTFCSPYL-----Q 191 (386)
T ss_pred e--EEEEe------CCCCHHHHHHhhCc-CceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence 2 22221 13588999998864 78999999999984 57999999999999999999999865433 2
Q ss_pred CCCC-CCcEEEeCCCCcCCCCC---eeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHH
Q 014724 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 375 (419)
Q Consensus 300 ~~~~-~~Div~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~ 375 (419)
.|+. ++|++++|++|++.|+. ||+++++++ +.+++.......+.+.... ..+++ ++..+. .+..+
T Consensus 192 ~pl~~g~Div~~S~sK~l~g~g~~~gG~v~~~~~------~i~~~~~~~~~~~g~~~~~-~~a~l--~~~~L~--tl~~r 260 (386)
T PRK06767 192 RPLELGCDAVVHSATKYIGGHGDVVAGVTICKTR------ALAEKIRPMRKDIGGIMAP-FDAWL--LLRGLK--TLAVR 260 (386)
T ss_pred CchhcCCcEEEecCcceecCCCCceeEEEEeChH------HHHHHHHHHHHHhCCCCCH-HHHHH--HHcCCC--cHHHH
Confidence 3444 78999999999997764 799998873 3333211111111111111 11111 233332 34567
Q ss_pred HHHHHHHHHHHHHHHHhC-CcEE
Q 014724 376 QNKVVSNCRALASRLVEL-GYKL 397 (419)
Q Consensus 376 ~~~v~~n~~~l~~~L~~~-G~~v 397 (419)
.+++.+|++++++.|++. +++.
T Consensus 261 ~~~~~~~a~~la~~L~~~p~v~~ 283 (386)
T PRK06767 261 MDRHCDNAEKIVSFLKNHDAVEG 283 (386)
T ss_pred HHHHHHHHHHHHHHHHcCCCccE
Confidence 788899999999999986 7764
No 155
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.82 E-value=2.2e-18 Score=172.74 Aligned_cols=266 Identities=19% Similarity=0.169 Sum_probs=177.0
Q ss_pred hhcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChH-
Q 014724 102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS- 178 (419)
Q Consensus 102 ~~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt- 178 (419)
.+.|+|..++++ +++.+++++.+.+.. + ..|+.. . ..+++ +.+++++|++++ +|++++|+
T Consensus 32 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~-~-~~y~~~---~----~~~lr----~~ia~~~~~~~~----~i~~t~G~~ 94 (367)
T PRK02731 32 ADIIKLASNENPLGPSPKAIEAIRAAADE-L-HRYPDG---S----GFELK----AALAEKFGVDPE----RIILGNGSD 94 (367)
T ss_pred CceEEecCCCCCCCCCHHHHHHHHHHHHh-h-cCCCCC---c----HHHHH----HHHHHHhCcCHH----HEEEcCCHH
Confidence 456888877655 578899998876642 2 234431 1 12344 567778888763 46777775
Q ss_pred HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEc
Q 014724 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG 258 (419)
Q Consensus 179 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~ 258 (419)
+++..++.+++++||+|++.+|.|..+.. .....|. ++++++. +++.+|++.+++.+.+ ++|+|+++
T Consensus 95 ~~l~~~~~~l~~~gd~vl~~~p~y~~~~~--------~~~~~g~--~~~~~~~--~~~~~~~~~l~~~~~~-~~~~v~l~ 161 (367)
T PRK02731 95 EILELLARAYLGPGDEVIYSEHGFAVYPI--------AAQAVGA--KPVEVPA--KDYGHDLDAMLAAVTP-RTRLVFIA 161 (367)
T ss_pred HHHHHHHHHhcCCCCEEEEecCCHHHHHH--------HHHHcCC--eEEEecc--cCCCCCHHHHHHHhCC-CCcEEEEe
Confidence 57888888899999999999987754321 1233455 4455544 3578999999999864 78999999
Q ss_pred CCCCCC--cCChHHHHHHHHHh--CCEEEEeccccccccccCCcCCCC---C-C-CcEEEeCCCCcC--CCCCeeEEEEe
Q 014724 259 ASAYPR--DFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPF---K-Y-CDVVTTTTHKSL--RGPRGGMIFFK 327 (419)
Q Consensus 259 ~s~~p~--~~dl~~I~~ia~~~--ga~livD~ah~~Gl~~~g~~~~~~---~-~-~Div~~S~hK~l--~GprgG~i~~~ 327 (419)
+++||+ ..+.+++.++++.+ |+++++|++|. .+...+.....+ + . ..++++|++|+| +|+|.||++++
T Consensus 162 ~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~y~-~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~ 240 (367)
T PRK02731 162 NPNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYA-EYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAP 240 (367)
T ss_pred CCCCCCCcCCCHHHHHHHHHhCCCCcEEEEECcHH-HhccCcCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeCC
Confidence 999985 57889999998875 99999999953 333322111111 1 2 237789999986 68899999998
Q ss_pred CCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChH-HHHHHHHHHHHHHHHHHHHHhCCcEEecCCCccee
Q 014724 328 KDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPE-FKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHL 406 (419)
Q Consensus 328 ~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~-~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hl 406 (419)
+ ++.+.+.....++. .+.. ...+...+++ ..+ .++..+...++++.+.+.|++.|+.+.+ ...++
T Consensus 241 ~------~~~~~l~~~~~~~~--~~~~-~~~~a~~~l~---~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~--~~g~~ 306 (367)
T PRK02731 241 P------EIIDALNRVRQPFN--VNSL-ALAAAVAALD---DDAFVEKSRALNAEGMAWLTEFLAELGLEYIP--SVGNF 306 (367)
T ss_pred H------HHHHHHHHccCCCC--CCHH-HHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHHCCCccCC--CCceE
Confidence 7 67666655432221 1111 2222222232 222 3666777788888999999998987764 34678
Q ss_pred EEEEeC
Q 014724 407 VLVDLR 412 (419)
Q Consensus 407 v~vd~~ 412 (419)
+|+++.
T Consensus 307 ~~i~~~ 312 (367)
T PRK02731 307 ILVDFD 312 (367)
T ss_pred EEEECC
Confidence 999883
No 156
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.81 E-value=1.1e-18 Score=174.42 Aligned_cols=266 Identities=18% Similarity=0.137 Sum_probs=176.2
Q ss_pred hcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCCh-HH
Q 014724 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-SP 179 (419)
Q Consensus 103 ~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sG-t~ 179 (419)
+.|+|..+++. +++.|++++.+.+.. .. .||. .| ..++ ++.++++++++++ +|++++| ++
T Consensus 30 ~~i~l~~n~~~~~~~~~v~~a~~~~~~~-~~-~~p~----~g---~~~l----r~~ia~~~~~~~~----~i~~t~G~~~ 92 (359)
T PRK03158 30 KIVKLASNENPYGPSPKVKEAIAAHLDE-LA-LYPD----GY---APEL----RTKVAKHLGVDEE----QLLFGAGLDE 92 (359)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHHHH-hh-cCCC----Cc---HHHH----HHHHHHHhCCCHH----HEEECCCHHH
Confidence 45778777754 578899998776542 11 1222 12 1234 3567778888763 4667777 46
Q ss_pred HHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcC
Q 014724 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 259 (419)
Q Consensus 180 A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~ 259 (419)
++..++.+++++||+|++.+|.++++.. .+...|.. +..++++ ++.+|++++++.+.+ ++++|++++
T Consensus 93 ~l~~~~~~~~~~gd~v~~~~p~y~~~~~--------~~~~~g~~--~~~~~~~--~~~~d~~~l~~~~~~-~~~~v~i~~ 159 (359)
T PRK03158 93 VIQMISRALLNPGTNTVMAEPTFSQYRH--------NAIIEGAE--VREVPLK--DGGHDLEAMLKAIDE-QTKIVWICN 159 (359)
T ss_pred HHHHHHHHHhCCCCEEEEcCCCHHHHHH--------HHHHcCCe--EEEEecC--CCCcCHHHHHHhcCC-CCCEEEEeC
Confidence 8888888999999999999998766431 12344554 4444444 467999999988764 789999999
Q ss_pred CCCCC--cCChHHHHHHHHH--hCCEEEEeccccccccccCCcCCCC---C--CCcEEEeCCCCcC--CCCCeeEEEEeC
Q 014724 260 SAYPR--DFDYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPF---K--YCDVVTTTTHKSL--RGPRGGMIFFKK 328 (419)
Q Consensus 260 s~~p~--~~dl~~I~~ia~~--~ga~livD~ah~~Gl~~~g~~~~~~---~--~~Div~~S~hK~l--~GprgG~i~~~~ 328 (419)
|+||+ ..+.++|.++++. +|++||+|++|. .+.+.+..+.++ + ...+++.|++|+| +|.|.||+++++
T Consensus 160 p~NPtG~~~~~~~l~~~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~ 238 (359)
T PRK03158 160 PNNPTGTYVNHEELLSFLESVPSHVLVVLDEAYY-EYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIASE 238 (359)
T ss_pred CCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchH-hhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCCH
Confidence 99985 5688888888887 599999999964 444332222221 1 2348889999987 588999999887
Q ss_pred CCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeEE
Q 014724 329 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVL 408 (419)
Q Consensus 329 ~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~ 408 (419)
++.+.+.....+. +.+.. ...++..++.. ....++..+...++++.+.+.|++.|+.+.++ +..++|
T Consensus 239 ------~~~~~~~~~~~~~--~~~~~-~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~g~~i~ 305 (359)
T PRK03158 239 ------ELIEKLNIARPPF--NTTRI-AQYAAIAALED--QAFLKECVEKNAEGLEQYYAFCKEYGLFYYPS--QTNFIF 305 (359)
T ss_pred ------HHHHHHHHhcCCC--CCCHH-HHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCeeCCC--cCcEEE
Confidence 6667665543321 22222 22222333421 12235566667778888999998888887653 345789
Q ss_pred EEeC
Q 014724 409 VDLR 412 (419)
Q Consensus 409 vd~~ 412 (419)
+++.
T Consensus 306 ~~~~ 309 (359)
T PRK03158 306 VDTG 309 (359)
T ss_pred EECC
Confidence 8874
No 157
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.81 E-value=1.4e-18 Score=175.41 Aligned_cols=212 Identities=19% Similarity=0.227 Sum_probs=148.9
Q ss_pred hhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccc-cccc
Q 014724 143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRV-SGTS 221 (419)
Q Consensus 143 ~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i-~~~g 221 (419)
++..+.|| +++++++|.+. .+++.||++|+..++.++++|||+|+++++.|++.+... ..+ ...+
T Consensus 51 ~pt~~~L~----~~lA~l~g~~~-----~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~-----~~~~~~~g 116 (386)
T PRK08045 51 NPTRDVVQ----RALAELEGGAG-----AVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLF-----DSLAKRGC 116 (386)
T ss_pred CccHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHH-----HHHHhhCC
Confidence 34455666 67888888542 367788899999999999999999999999887643211 011 1112
Q ss_pred cccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcC
Q 014724 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (419)
Q Consensus 222 ~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~ 299 (419)
+++..+ + ..|++++++.+++ ++|+|++++|+||+ ..|+++|.++|+++|+++++|+++..+.. .
T Consensus 117 --i~v~~v--d----~~d~e~l~~~l~~-~tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivDeay~~~~~-----~ 182 (386)
T PRK08045 117 --YRVLFV--D----QGDEQALRAALAE-KPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTFLSPAL-----Q 182 (386)
T ss_pred --eEEEEe--C----CCCHHHHHHhccc-CCeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCcccc-----C
Confidence 133232 2 3689999998865 79999999999985 67999999999999999999999765532 3
Q ss_pred CCCC-CCcEEEeCCCCcCCCCC---eeEEEEeCCCcchhhHHHHhhhccc-CCCCCCChHHHHHHHHHHHHHhcChHHHH
Q 014724 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVF-PGLQGGPHNHTIGGLAVCLKHAQSPEFKV 374 (419)
Q Consensus 300 ~~~~-~~Div~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~-~~~~g~p~~~~iaala~al~~~~~~~~~~ 374 (419)
.|++ ++|++++|+||++.|+. +|+++++++ ++.+++..... .+...+| ..+ ..+++.+. .+..
T Consensus 183 ~pl~~gaDivv~S~tK~l~G~~d~~~G~vi~~~~-----~~~~~l~~~~~~~g~~~~p----~~~-~l~~rgl~--tl~~ 250 (386)
T PRK08045 183 NPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDP-----DVVTELAWWANNIGVTGGA----FDS-YLLLRGLR--TLVP 250 (386)
T ss_pred CchhhCCCEEEeecceeccCCCCceeEEEEeCcH-----HHHHHHHHHHHhcCCCCCH----HHH-HHHHhhhc--cHHH
Confidence 4555 89999999999998876 688877654 56565543221 1211122 111 11233332 3677
Q ss_pred HHHHHHHHHHHHHHHHHhCC
Q 014724 375 YQNKVVSNCRALASRLVELG 394 (419)
Q Consensus 375 ~~~~v~~n~~~l~~~L~~~G 394 (419)
+.+++.+|+..++++|++..
T Consensus 251 R~~~~~~na~~la~~L~~~p 270 (386)
T PRK08045 251 RMELAQRNAQAIVKYLQTQP 270 (386)
T ss_pred HHHHHHHHHHHHHHHHHcCC
Confidence 88999999999999999863
No 158
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.81 E-value=2.1e-18 Score=173.94 Aligned_cols=213 Identities=21% Similarity=0.243 Sum_probs=147.9
Q ss_pred hhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCcccccccccccccc
Q 014724 143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 222 (419)
Q Consensus 143 ~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~ 222 (419)
++..+++| +.+++++|.+. + +.++||+.|+.+++.+++++||+|++.++.|++.+.... ..+...|.
T Consensus 53 ~p~~~~le----~~la~l~g~~~----~-~~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~----~~~~~~g~ 119 (380)
T TIGR01325 53 NPTVAAFE----ERIAALEGAER----A-VATATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGFIS----EILPRFGI 119 (380)
T ss_pred CchHHHHH----HHHHHHhCCCc----E-EEECCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHH----HHHHHhCC
Confidence 34456676 56788899865 3 678899999999999999999999998887766432100 01123344
Q ss_pred ccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CcCChHHHHHHHHHhCCEEEEeccccccccccCCcCC
Q 014724 223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD 300 (419)
Q Consensus 223 ~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p--~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~ 300 (419)
++..++. .|++++++.+++ ++|+|++++|+|| ...|+++|.++|+++|+++++|++|..+.. ..
T Consensus 120 --~v~~v~~------~d~~~l~~~i~~-~tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD~a~~~~~~-----~~ 185 (380)
T TIGR01325 120 --EVSFVDP------TDLNAWEAAVKP-NTKLVFVETPSNPLGELVDIAALAELAHAIGALLVVDNVFATPVL-----QQ 185 (380)
T ss_pred --EEEEECC------CCHHHHHHhcCC-CceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCccccc-----CC
Confidence 4444332 278999988864 7899999999887 467999999999999999999999765432 23
Q ss_pred CCC-CCcEEEeCCCCcCCCC---CeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHH
Q 014724 301 PFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQ 376 (419)
Q Consensus 301 ~~~-~~Div~~S~hK~l~Gp---rgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~ 376 (419)
+++ ++|++++|+||++.|+ .||++++++ ++.+.+....... |..... ..+ ..++..+ ..+..+.
T Consensus 186 pl~~g~Divv~S~sK~l~g~g~~~gG~vv~~~------~~~~~l~~~~~~~--g~~~~p-~~a-~~~l~~l--~tl~~r~ 253 (380)
T TIGR01325 186 PLKLGADVVVYSATKHIDGQGRVMGGVIAGSE------ELMAEVAVYLRHT--GPAMSP-FNA-WVLLKGL--ETLSLRM 253 (380)
T ss_pred chhhCCCEEEeeccceecCCCCeEEEEEEeCH------HHHHHHHHHHHhh--CCCCCH-HHH-HHHHhcc--CcHHHHH
Confidence 455 7999999999999775 258888777 4555544322111 111111 112 2233333 2356678
Q ss_pred HHHHHHHHHHHHHHHhCC
Q 014724 377 NKVVSNCRALASRLVELG 394 (419)
Q Consensus 377 ~~v~~n~~~l~~~L~~~G 394 (419)
+++.+|++.+++.|++++
T Consensus 254 ~~~~~~a~~la~~L~~~p 271 (380)
T TIGR01325 254 QKQFDSALAIAEWLQAQP 271 (380)
T ss_pred HHHHHHHHHHHHHHHcCC
Confidence 889999999999999873
No 159
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.81 E-value=2.3e-18 Score=172.00 Aligned_cols=283 Identities=19% Similarity=0.229 Sum_probs=177.3
Q ss_pred hcccccccCCC------ChHHHHHHHhh-hhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecC
Q 014724 103 KSLELIASENF------TSRAVMEAVGS-CLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPL 175 (419)
Q Consensus 103 ~~i~L~~sen~------~~~~V~eal~~-~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~ 175 (419)
+.|+|..+++. .++++++++.+ ........+|+. ..| ..++++.+.+++.+..|.+.+. ..+|+++
T Consensus 2 ~~I~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~g---~~~lr~~ia~~~~~~~~~~~~~-~~~i~~~ 74 (363)
T PF00155_consen 2 DVINLGSNAPLLLSQNPPPPAAIKAAIRGAATSSSFLGYPP---PQG---YPELREAIADFLGRRYGVPVDP-EANILVT 74 (363)
T ss_dssp TEEESSSSSTSSTTSSHHHHHHHHHHHHHHHHHTGCTSSTC---TTH---HHHHHHHHHHHHHHHHTHHTTG-GEGEEEE
T ss_pred CEEEEECCCCCCcccccchHHHHHHHHHHhhcccccccCCC---chh---hHHHHHHHHHHhhhccCccccc-ceEEEEe
Confidence 34666665532 24666666654 222222234443 123 2366655545444333333321 1258888
Q ss_pred ChHH-HHHHHHHHc-cCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccC-CCCCCCCHHHHHHHhhhc--
Q 014724 176 SGSP-ANFEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD-ESTGLVDYDMLEKTAILF-- 250 (419)
Q Consensus 176 sGt~-A~~~~~~al-l~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~-~~~~~iD~d~Le~~l~~~-- 250 (419)
+|+. ++..++..+ .++||.|++++|.|.++.. .+...|. +.++++++ .+++.+|+++|++.+++.
T Consensus 75 ~G~~~~~~~~~~~~~~~~~~~vlv~~P~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 144 (363)
T PF00155_consen 75 SGAQAALFLLLRLLKINPGDTVLVPDPCYPSYIE--------AARLLGA--EVIPVPLDSENDFHLDPEALEEALDELPS 144 (363)
T ss_dssp SHHHHHHHHHHHHHHSSTTSEEEEEESSSTHHHH--------HHHHTTS--EEEEEEEEETTTTEETHHHHHHHHHTSHT
T ss_pred cccccchhhhhhcccccccccceecCCccccccc--------cccccCc--eeeeccccccccccccccccccccccccc
Confidence 9976 555666666 6799999999998877642 2345565 44454443 246789999999999864
Q ss_pred ---CCeEEEEcCCCCCC--cCC---hHHHHHHHHHhCCEEEEeccccccccccCC-c---CCCCC-CCc-EEEeCCCCcC
Q 014724 251 ---RPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASV-V---ADPFK-YCD-VVTTTTHKSL 316 (419)
Q Consensus 251 ---~pklIi~~~s~~p~--~~d---l~~I~~ia~~~ga~livD~ah~~Gl~~~g~-~---~~~~~-~~D-iv~~S~hK~l 316 (419)
++++|++++|+||+ ..+ +++|+++|+++|++|++|++|. ++.+... . ...++ +.+ +++.|++|+|
T Consensus 145 ~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~ 223 (363)
T PF00155_consen 145 KGPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYS-DLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSF 223 (363)
T ss_dssp TTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTT-TGBSSSSHTHHHHGHHTTTSTEEEEEESTTTT
T ss_pred cccccceeeecccccccccccccccccchhhhhcccccceeeeecee-ccccCCCccCcccccccccccceeeeeccccc
Confidence 56899999999985 233 5566666999999999999964 4443321 0 01112 334 8899999986
Q ss_pred --CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhc--ChHHHHHHHHHHHHHHHHHHHHHh
Q 014724 317 --RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ--SPEFKVYQNKVVSNCRALASRLVE 392 (419)
Q Consensus 317 --~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~--~~~~~~~~~~v~~n~~~l~~~L~~ 392 (419)
+|.|.|++++++ ++.+.+......+.. + .....+++..+.... ....++..+++.++++++.+.|++
T Consensus 224 g~~GlRvG~i~~~~------~~~~~l~~~~~~~~~--~-~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~ 294 (363)
T PF00155_consen 224 GLPGLRVGYIVAPP------ELIERLRRFQRSGLS--S-SPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEE 294 (363)
T ss_dssp TSGGGTEEEEEEEH------HHHHHHHHHHHHTTS--S-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccchh------hhhhhhhhccccccc--c-chhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHH
Confidence 678889999977 677777654433322 1 122222222333222 124577888899999999999999
Q ss_pred CCcEEecCCCcceeEEEEeCC
Q 014724 393 LGYKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 393 ~G~~v~~~~t~~hlv~vd~~~ 413 (419)
.|+.+..+ ..+.++|+++..
T Consensus 295 ~~~~~~~~-~~~~~~~~~~~~ 314 (363)
T PF00155_consen 295 IGITVLPP-EAGFFLWVRLDP 314 (363)
T ss_dssp TTSEEEHH-SBSSEEEEEESH
T ss_pred hhhheeec-cCccEEEEEccc
Confidence 99998864 356677877654
No 160
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.81 E-value=1.7e-17 Score=168.01 Aligned_cols=276 Identities=17% Similarity=0.173 Sum_probs=171.8
Q ss_pred hcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcC--CCCCCCceeEecCCh-
Q 014724 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN--LDENKWGVNVQPLSG- 177 (419)
Q Consensus 103 ~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g--~~~~~~~v~V~~~sG- 177 (419)
..+.|..+++. +++.+.+++.+.... ..+|+. ..|. .++++.+.+++. ..| ++++ +|++++|
T Consensus 31 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~--~~~Y~~---~~g~---~~lr~~ia~~~~-~~~~~~~~~----~i~~t~G~ 97 (397)
T PRK07568 31 KVYHLNIGQPDIKTPEVFFEAIKNYDEE--VLAYSH---SQGI---PELREAFAKYYK-KWGIDVEPD----EILITNGG 97 (397)
T ss_pred CEEEecCCCCCCCCCHHHHHHHHHHhcC--CcCcCC---CCCC---HHHHHHHHHHHH-HhCCCCCcc----eEEEcCCh
Confidence 35677766642 678899988765421 123432 1232 245544445444 233 3442 3555555
Q ss_pred HHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCC-C-CCHHHHHHHhhhcCCeEE
Q 014724 178 SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG-L-VDYDMLEKTAILFRPKLI 255 (419)
Q Consensus 178 t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~-~-iD~d~Le~~l~~~~pklI 255 (419)
++|+..++.++++|||+|++++|.+..+.. .....|. ++++++.+.+++ . .|++++++.+.+ ++++|
T Consensus 98 ~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~--------~~~~~g~--~~~~v~~~~~~g~~~~~~~~l~~~~~~-~~~~v 166 (397)
T PRK07568 98 SEAILFAMMAICDPGDEILVPEPFYANYNG--------FATSAGV--KIVPVTTKIEEGFHLPSKEEIEKLITP-KTKAI 166 (397)
T ss_pred HHHHHHHHHHhcCCCCEEEEecCCCccHHH--------HHHHcCC--EEEEeecCcccCCCCCCHHHHHHhcCc-cceEE
Confidence 679999999999999999999987654421 1234455 444444442233 3 468999998864 78999
Q ss_pred EEcCCCCCCc--C---ChHHHHHHHHHhCCEEEEeccccccccccCC-cCCCC--CC-Cc--EEEeCCCCcC--CCCCee
Q 014724 256 IAGASAYPRD--F---DYPRMRQIADAVGALLMMDMAHISGLVAASV-VADPF--KY-CD--VVTTTTHKSL--RGPRGG 322 (419)
Q Consensus 256 i~~~s~~p~~--~---dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~-~~~~~--~~-~D--iv~~S~hK~l--~GprgG 322 (419)
++++|+||+- . ++++|.++|+++|++|++|+++ .++.+.+. .++.. .+ .+ +++.|+||+| +|.|.|
T Consensus 167 ~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y-~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G 245 (397)
T PRK07568 167 LISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVY-REFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIG 245 (397)
T ss_pred EEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccc-hhcccCCCCccChhhcCCCcCCEEEEecchhhccCCCcceE
Confidence 9888999852 2 5789999999999999999994 56654432 12222 12 22 7899999987 588999
Q ss_pred EEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEEecCC
Q 014724 323 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGG 401 (419)
Q Consensus 323 ~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~~~~ 401 (419)
+++++++ ++.+.+....... .+.+.... .+++.++... +..+++..+++.++++.+.+.|++. |+.+..+
T Consensus 246 ~~~~~~~-----~~~~~~~~~~~~~-~~~s~~~q-~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p- 316 (397)
T PRK07568 246 CLISKNK-----ELIAAAMKLCQAR-LSPPTLEQ-IGAAALLDTP-ESYFDEVREEYKKRRDILYEELNKIPGVVCEKP- 316 (397)
T ss_pred EEecCCH-----HHHHHHHHHhhcc-CCCCcHHH-HHHHHHhhCC-HHHHHHHHHHHHHHHHHHHHHHhcCCCceecCC-
Confidence 9998643 5555543322111 12222222 2333344321 2334666777888899999999886 6665532
Q ss_pred CcceeEEEEeC
Q 014724 402 SDNHLVLVDLR 412 (419)
Q Consensus 402 t~~hlv~vd~~ 412 (419)
..+.++|+++.
T Consensus 317 ~g~~~~~~~l~ 327 (397)
T PRK07568 317 KGAFYIIAKLP 327 (397)
T ss_pred CcceEEEEecC
Confidence 34566888874
No 161
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.81 E-value=2.6e-18 Score=172.71 Aligned_cols=268 Identities=18% Similarity=0.182 Sum_probs=174.6
Q ss_pred hcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChH-H
Q 014724 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 179 (419)
Q Consensus 103 ~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt-~ 179 (419)
+.|+|..++|. +++.+++++.+.... ...|+.. .| ..+ ++.+++++|++++ +|++++|+ +
T Consensus 37 ~~i~l~~~~~~~~~~~~~~~al~~~~~~--~~~Y~~~---~g----~~l----r~~ia~~~~~~~~----~i~~t~G~~~ 99 (371)
T PRK05166 37 RIAKLGSNENPLGPSPAVRRAFADIAEL--LRLYPDP---QG----RAL----REAIAARTGVPAD----RIILGNGSED 99 (371)
T ss_pred ceEEcCCCCCCCCCCHHHHHHHHHHHHH--hhcCCCC---cH----HHH----HHHHHHHhCcCHH----HEEEcCCHHH
Confidence 45788877654 688899998764322 1134321 12 133 3567778888763 47777775 6
Q ss_pred HHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcC
Q 014724 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 259 (419)
Q Consensus 180 A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~ 259 (419)
++..++.+++++||.|++..|+|..+.. .+...|. ++++++.+ +++.+|++++++.+++ ++|+|++++
T Consensus 100 ~l~~~~~~~~~~gd~vli~~P~y~~~~~--------~~~~~g~--~~~~v~~~-~~~~~~~~~l~~~~~~-~~~~v~l~~ 167 (371)
T PRK05166 100 LIAVICRAVLRPGDRVVTLYPSFPLHED--------YPTMMGA--RVERVTVT-PDLGFDLDALCAAVAR-APRMLMFSN 167 (371)
T ss_pred HHHHHHHHhcCCCCEEEEcCCChHHHHH--------HHHHcCC--eEEEeecC-CCCCCCHHHHHHhhhc-CCCEEEEeC
Confidence 8888989999999999999988765431 1234565 44445454 3578999999998865 789999999
Q ss_pred CCCCC--cCChHHHHHHHHH--hCCEEEEeccccccccccCCcCCCC---C--C-CcEEEeCCCCcC--CCCCeeEEEEe
Q 014724 260 SAYPR--DFDYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPF---K--Y-CDVVTTTTHKSL--RGPRGGMIFFK 327 (419)
Q Consensus 260 s~~p~--~~dl~~I~~ia~~--~ga~livD~ah~~Gl~~~g~~~~~~---~--~-~Div~~S~hK~l--~GprgG~i~~~ 327 (419)
|+||+ ..+.+++.++++. .+++|++|+++ ..+...+..++.+ . + .-|+++|++|+| +|.|.||++..
T Consensus 168 p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~ 246 (371)
T PRK05166 168 PSNPVGSWLTADQLARVLDATPPETLIVVDEAY-AEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVS 246 (371)
T ss_pred CCCCCCCCCCHHHHHHHHHhCCCCcEEEEECcH-HHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecC
Confidence 99985 5676666666653 48899999995 4444332222221 1 1 137899999986 88999998775
Q ss_pred CCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeE
Q 014724 328 KDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLV 407 (419)
Q Consensus 328 ~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv 407 (419)
++ ++.+.+.....+. +. +.....+...++.. .+.+++..+.+.++++++.+.|++.|+.+.++ +..++
T Consensus 247 ~~-----~l~~~~~~~~~~~--~~-~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~p~--~g~fl 314 (371)
T PRK05166 247 DP-----ELVGLLDRVRTPF--NV-NGAAQAAALAALDD--EEHLAKGVALALAERERLKKELAEMGYRIAPS--RANFL 314 (371)
T ss_pred CH-----HHHHHHHHhccCC--CC-CHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCcCeeCCC--cCCEE
Confidence 43 5666665433221 11 21122222223321 12346667788888999999999999876543 34568
Q ss_pred EEEeC
Q 014724 408 LVDLR 412 (419)
Q Consensus 408 ~vd~~ 412 (419)
|+++.
T Consensus 315 ~~~~~ 319 (371)
T PRK05166 315 FFDAR 319 (371)
T ss_pred EEeCC
Confidence 99875
No 162
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.81 E-value=1.3e-18 Score=176.63 Aligned_cols=213 Identities=17% Similarity=0.188 Sum_probs=148.7
Q ss_pred hHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccc
Q 014724 144 EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY 223 (419)
Q Consensus 144 ~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~ 223 (419)
+...++| +.+++++|.+. .+.++||+.|+.+++.++++|||+|++..+.|++.+.... ..+...|.
T Consensus 65 p~~~~le----~~lA~l~g~~~-----~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~----~~~~~~G~- 130 (403)
T PRK07503 65 PTLALLE----QRMASLEGGEA-----AVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLH----HGLGEFGV- 130 (403)
T ss_pred chHHHHH----HHHHHHhCCCc-----EEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHH----HHHhhCCE-
Confidence 4456666 57888999875 2778899999999999999999999999888765432100 11223343
Q ss_pred cEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcCCC
Q 014724 224 FESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADP 301 (419)
Q Consensus 224 ~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~ 301 (419)
++..++. .|++++++.+++ ++|+|++++|+||+ ..|+++|.++|+++|++|++|++|..+.. ..+
T Consensus 131 -~v~~vd~------~d~~~l~~~i~~-~tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD~a~a~~~~-----~~~ 197 (403)
T PRK07503 131 -TVRHVDL------TDPAALKAAISD-KTRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVDNTYCTPYL-----QRP 197 (403)
T ss_pred -EEEEeCC------CCHHHHHHhcCc-cCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCccccc-----CCc
Confidence 4444332 378999999875 79999999888884 57999999999999999999999865532 234
Q ss_pred CC-CCcEEEeCCCCcCCCC---CeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHH
Q 014724 302 FK-YCDVVTTTTHKSLRGP---RGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQN 377 (419)
Q Consensus 302 ~~-~~Div~~S~hK~l~Gp---rgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~ 377 (419)
+. ++|++++|++|++.|+ +||+++.++ ++.+++.........|.......+++ ++..+ +.+..+.+
T Consensus 198 l~~g~Di~v~S~tK~l~g~gd~~gG~v~~~~------~l~~~l~~~~~~~~~g~~~s~~~a~l--~l~~L--~tl~~r~~ 267 (403)
T PRK07503 198 LELGADLVVHSATKYLGGHGDITAGLVVGGK------ALADRIRLEGLKDMTGAVMSPFDAFL--LMRGL--KTLALRMD 267 (403)
T ss_pred hhhCCCEEEccccccccCCCceeEEEEEcCH------HHHHHHHhhhHHhCcCCCCCHHHHHH--HHcCc--chHHHHHH
Confidence 44 7899999999999764 479888655 56666642111111122111222222 33333 23566778
Q ss_pred HHHHHHHHHHHHHHhC
Q 014724 378 KVVSNCRALASRLVEL 393 (419)
Q Consensus 378 ~v~~n~~~l~~~L~~~ 393 (419)
++.+|++.+.+.|+++
T Consensus 268 ~~~~na~~~a~~L~~~ 283 (403)
T PRK07503 268 RHCASAQAVAEWLARH 283 (403)
T ss_pred HHHHHHHHHHHHHHhC
Confidence 8889999999999986
No 163
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.81 E-value=7.5e-18 Score=169.63 Aligned_cols=239 Identities=11% Similarity=0.077 Sum_probs=160.9
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHc-cCCC
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPH 192 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~al-l~pG 192 (419)
.+++.++++.+.+...+..| .| +...++| +++++++|.+. + +.++||+.|+.+++.++ ++||
T Consensus 9 ~~~~e~~a~~~~~~~~~~~~-------~g-~~~~~~e----~~la~~~g~~~----~-v~~~sgt~aL~~~l~al~~~pG 71 (376)
T TIGR02379 9 VTGQELEYIAEAISEGKLSG-------DG-PFSRRCE----TWLENRTGTKK----A-LLTPSCTAALEMAALLLDIQPG 71 (376)
T ss_pred CCHHHHHHHHHHHHcCCccC-------Cc-HHHHHHH----HHHHHHhCCCe----E-EEeCCHHHHHHHHHHHcCCCCc
Confidence 45666888887775443211 11 3345665 56778888765 2 66778899999998888 8999
Q ss_pred CEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCCcCChHHHH
Q 014724 193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMR 272 (419)
Q Consensus 193 D~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~~~dl~~I~ 272 (419)
|+|++++++|.+... .+...|. +++.++++++++.+|++++++.+++ ++|+|+..++ ++...|+++|.
T Consensus 72 d~Viv~~~t~~~~~~--------~~~~~G~--~~v~vd~d~~~~~~d~~~le~~i~~-~tk~Iip~~~-~G~~~d~~~I~ 139 (376)
T TIGR02379 72 DEVIMPSYTFVSTAN--------AFVLRGA--KIVFVDIRPDTMNIDETLIESAITH-RTKAIVPVHY-AGVACDMDTIM 139 (376)
T ss_pred CEEEECCCCcHHHHH--------HHHHcCC--EEEEEecCCCcCCCCHHHHHHhcCc-CceEEEEeCC-CCCccCHHHHH
Confidence 999999988765431 2334455 5666667766678999999999874 7899887664 56778999999
Q ss_pred HHHHHhCCEEEEeccccccccccCCcCCCCC-CCcEEEeCCCC--cC-CCCCeeEEEEeCCCcchhhHHHHhhhcccCCC
Q 014724 273 QIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHK--SL-RGPRGGMIFFKKDPVLGVELESAINNAVFPGL 348 (419)
Q Consensus 273 ~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~-~~Div~~S~hK--~l-~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~ 348 (419)
++|++||++||+|++|..|..+.+. ++. ..|+.++|+|+ .+ +|++||+++++++ ++.+++......+.
T Consensus 140 ~la~~~~i~vIeDaa~~~g~~~~~~---~~g~~~~~~~fSf~~~K~l~~g~~gG~v~~~~~-----~~~~~~~~~~~~g~ 211 (376)
T TIGR02379 140 ALANKHQLFVIEDAAQGVMSTYKGR---ALGSIGHLGTFSFHETKNYTSGGEGGALLINDQ-----AFIERAEIIREKGT 211 (376)
T ss_pred HHHHHCCCEEEEECccccCCccCCc---ccCCCCCEEEEeCCCCCcCcccCCceEEEECCH-----HHHHHHHHHHHhCC
Confidence 9999999999999999877544332 222 35888888875 44 6789999999875 56555442211000
Q ss_pred -----------------CC-CChHHH-HHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC
Q 014724 349 -----------------QG-GPHNHT-IGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL 393 (419)
Q Consensus 349 -----------------~g-~p~~~~-iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~ 393 (419)
.| +..+.. .||+ ++.++. .+++..++.+++++++.+.|.+.
T Consensus 212 ~~~~~~~~~~~~~~~~~~g~n~~~~~~~Aa~--g~~qL~--~l~~~~~~r~~~~~~y~~~L~~~ 271 (376)
T TIGR02379 212 NRSQFFRGEVDKYTWRDIGSSYLPSELQAAY--LWAQLE--QADRINQDRLATWQLYQDALKPL 271 (376)
T ss_pred CCccccccCCCcceeeeecccCCccHHHHHH--HHHHHH--HhHHHHHHHHHHHHHHHHHhccC
Confidence 01 111112 2333 333332 35667777788888888888764
No 164
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.81 E-value=1.6e-18 Score=173.61 Aligned_cols=261 Identities=13% Similarity=0.098 Sum_probs=177.5
Q ss_pred cccccccCCCChHHHHHHHhhhhhccCCC--CCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHH
Q 014724 104 SLELIASENFTSRAVMEAVGSCLTNKYSE--GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPAN 181 (419)
Q Consensus 104 ~i~L~~sen~~~~~V~eal~~~l~~~y~~--g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~ 181 (419)
.+.|+|++..+|+.|++|+...+.+.... |...- .....++.+.++ .+++.++++||.+.+ +.+.++.+||+.|+
T Consensus 4 ~~l~~pGP~~~p~~V~~a~~~~~~~~~~~~~g~~~~-~hr~~~f~~~~~-~~~~~l~~l~~~~~~-~~v~~~~gsgt~~~ 80 (360)
T PRK05355 4 VYNFSAGPAMLPEEVLEQAQQELLDWNGSGMSVMEI-SHRSKEFEAVAE-EAEADLRELLNIPDN-YKVLFLQGGASLQF 80 (360)
T ss_pred eeeccCCCCCCCHHHHHHHHHHhhccccCCcccccc-CCCCHHHHHHHH-HHHHHHHHHhCCCCC-cEEEEEcCCchHHH
Confidence 45788999999999999999876431111 11111 123445555565 578999999998432 33555556788899
Q ss_pred HHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHH-HhhhcCCeEEEEcCC
Q 014724 182 FEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEK-TAILFRPKLIIAGAS 260 (419)
Q Consensus 182 ~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~-~l~~~~pklIi~~~s 260 (419)
++++.+++.+||+++++.. |.+.+.+. +.+...|.. ..+. .++..+..+..++++ .+++ ++++|.+.+.
T Consensus 81 Ea~~~nl~~~g~~~l~i~~---G~fg~r~~---~~a~~~g~~-~~~~--~~~~~g~~~~~~~~~~~l~~-~~~~V~~th~ 150 (360)
T PRK05355 81 AMVPMNLLGGGKKADYVDT---GSWSKKAI---KEAKKYGEV-NVAA--SSEDDGFTYIPPLDEWQLSD-DAAYVHYTSN 150 (360)
T ss_pred HHHHHhcCCCCCeEEEEEC---CHHHHHHH---HHHHHhCCc-eEEe--cccccCCCCCCChhhccCCC-CCCEEEEccC
Confidence 9999999999999998863 33333321 122344532 3333 222234455555555 5654 7898877654
Q ss_pred CC--CCcC-ChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCCCCcEEEeCCCCcCCCCCe-eEEEEeCCCcchhhH
Q 014724 261 AY--PRDF-DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVEL 336 (419)
Q Consensus 261 ~~--p~~~-dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~~~Div~~S~hK~l~Gprg-G~i~~~~~~~~~~~l 336 (419)
.+ +... |+++| +|+++++|+++++|.. +.+++..|++++|.||+| ||.| |+++.+++ +
T Consensus 151 eTstGv~~~~i~~i------~g~l~vVDavss~g~~-----~idv~~~d~~~~ssqK~l-gP~Glg~l~~s~~------~ 212 (360)
T PRK05355 151 ETIDGTEFHELPDT------GDVPLVADMSSDILSR-----PIDVSKFGLIYAGAQKNI-GPAGLTIVIVRED------L 212 (360)
T ss_pred CCcceEecCccccc------CCCcEEEEcCccccCc-----cCCHHHccEEEEeccccc-cCCceEEEEECHH------H
Confidence 44 4455 56555 8999999999887743 223335689999999988 6997 88888874 3
Q ss_pred HHHhhh-----------cccCCCCCCChHHHHHHHHHHHHHhcCh-HHHHHHHHHHHHHHHHHHHHHhCCc
Q 014724 337 ESAINN-----------AVFPGLQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVELGY 395 (419)
Q Consensus 337 ~~~i~~-----------~~~~~~~g~p~~~~iaala~al~~~~~~-~~~~~~~~v~~n~~~l~~~L~~~G~ 395 (419)
.+++.. .....+.++|+.+.+.++..+|+.+... +++++.+++.+++++++++|+++|+
T Consensus 213 l~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~ 283 (360)
T PRK05355 213 LGRALPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDF 283 (360)
T ss_pred HhhcccCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 222221 0111124788999999999999998877 6899999999999999999999885
No 165
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.81 E-value=2.7e-19 Score=179.44 Aligned_cols=229 Identities=19% Similarity=0.261 Sum_probs=157.3
Q ss_pred HHHHHHHHcCCCCCCCceeEecCChH-HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEeccc
Q 014724 153 CQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 231 (419)
Q Consensus 153 ~~~~la~~~g~~~~~~~v~V~~~sGt-~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~ 231 (419)
+++.++++||.+.. .+.++|| .+|.+++.++++|||+|+++..+|-+.+ + .+.+.|+....++..
T Consensus 71 Ae~~aA~~fGAd~t-----~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~-~-------alil~ga~Pvyi~p~- 136 (417)
T PF01276_consen 71 AEELAARAFGADKT-----FFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVY-N-------ALILSGAIPVYIPPE- 136 (417)
T ss_dssp HHHHHHHHHTESEE-----EEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHH-H-------HHHHHTEEEEEEEEE-
T ss_pred HHHHHHHhcCCCeE-----EEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHH-H-------HHHHcCCeEEEecCC-
Confidence 45788999999984 5667885 5999999999999999999998877664 2 244566643333322
Q ss_pred CCCC---CCCCH-----HHHHHHhhhcC----CeEEEEcCCCC-CCcCChHHHHHHHHHhCCEEEEeccccccccccCCc
Q 014724 232 DEST---GLVDY-----DMLEKTAILFR----PKLIIAGASAY-PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVV 298 (419)
Q Consensus 232 ~~~~---~~iD~-----d~Le~~l~~~~----pklIi~~~s~~-p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~ 298 (419)
+++. +.|++ +.++++++++. ++++++.+|+| +...|+++|.++|++++.+|++|+||++-+.+....
T Consensus 137 ~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~lp 216 (417)
T PF01276_consen 137 DNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTYYGVCYDIKEIAEICHKHGIPLLVDEAHGAHFGFHPLP 216 (417)
T ss_dssp E-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-TTSEEE-HHHHHHHHCCTECEEEEE-TT-TTGGCSGGG
T ss_pred ccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCCCeEEECHHHHHHHhcccCCEEEEEccccccccCCCCc
Confidence 2222 25677 99999998642 23476666664 678899999999999999999999998776655333
Q ss_pred CCCCC-CCc-------EEEeCCCCcCCCC-CeeEEEEeCCC-cchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhc
Q 014724 299 ADPFK-YCD-------VVTTTTHKSLRGP-RGGMIFFKKDP-VLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ 368 (419)
Q Consensus 299 ~~~~~-~~D-------iv~~S~hK~l~Gp-rgG~i~~~~~~-~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~ 368 (419)
.+.+. ++| +++.|+||++++. ++++|..++.. + -.++++........++|+...++++-.|..++.
T Consensus 217 ~~a~~~gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~~v----~~~~~~~~l~~~~TTSPSY~lmASlD~a~~~m~ 292 (417)
T PF01276_consen 217 RSALALGADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDRIV----DHERVNEALSMHQTTSPSYPLMASLDVARAQME 292 (417)
T ss_dssp TTCSSTTSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCCCT----THHHHHHHHHHHS-SS--HHHHHHHHHHHHHHS
T ss_pred cchhhccCccccccceeeeechhhcccccccceEEEecCCCcc----cHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHh
Confidence 34444 889 9999999999888 45888888752 2 123444432222345788999999998888874
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHH---h-CCcEEec
Q 014724 369 SPEFKVYQNKVVSNCRALASRLV---E-LGYKLVS 399 (419)
Q Consensus 369 ~~~~~~~~~~v~~n~~~l~~~L~---~-~G~~v~~ 399 (419)
..+.++..++..++++.+++.|+ + .+|+++.
T Consensus 293 ~~~G~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~~ 327 (417)
T PF01276_consen 293 EEEGRELLEEAIELAEEFRKKINRLNDIWGFKVLG 327 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCT-SSEESS
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHhcCCCceEecCC
Confidence 35678888889999999999994 3 3677663
No 166
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.81 E-value=1.8e-18 Score=175.53 Aligned_cols=216 Identities=17% Similarity=0.187 Sum_probs=150.8
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccc
Q 014724 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (419)
Q Consensus 142 g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g 221 (419)
+++...++| +.+++++|.+. .+.+.||+.|+..++.++++|||+|++++..|++.+.... ..+...|
T Consensus 68 ~~p~~~~le----~~lA~l~g~~~-----al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~----~~~~~~G 134 (403)
T PRK07810 68 GNPTVSMFE----ERLRLIEGAEA-----CFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCN----EILPRWG 134 (403)
T ss_pred CCchHHHHH----HHHHHHhCCCc-----EEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHH----HHHHHcC
Confidence 445566777 57888999775 3788999999999999999999999998876665432100 1122345
Q ss_pred cccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcC
Q 014724 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (419)
Q Consensus 222 ~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~ 299 (419)
. ++..++. .|++++++++++ ++|+|++++|+||+ ..|+++|+++|+++|+++++|++|..+...
T Consensus 135 ~--~v~~vd~------~d~~~l~~ai~~-~tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD~a~a~~~~~----- 200 (403)
T PRK07810 135 V--ETVFVDG------EDLSQWEEALSV-PTQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLDNVFATPLLQ----- 200 (403)
T ss_pred c--EEEEECC------CCHHHHHHhcCc-CceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCCccccC-----
Confidence 4 4444432 489999999875 78999999999884 569999999999999999999998766432
Q ss_pred CCCC-CCcEEEeCCCCcCCCCC---eeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHH
Q 014724 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 375 (419)
Q Consensus 300 ~~~~-~~Div~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~ 375 (419)
.+++ ++|++++|+||++.|.- ||+++++++ .+.+.+...... .|.......+++ ++..+. .+..+
T Consensus 201 ~~~~~gaDivv~S~tK~l~g~g~~~gG~v~~~~~-----~~~~~l~~~~~~--~g~~~s~~~a~l--~l~~L~--tl~~R 269 (403)
T PRK07810 201 RGLPLGADVVVYSGTKHIDGQGRVLGGAILGDRE-----YIDGPVQKLMRH--TGPALSAFNAWV--LLKGLE--TLALR 269 (403)
T ss_pred ChhhcCCcEEEccCCceecCCcCceeEEEEeChH-----HHHHHHHHHHHH--hCCCCCHHHHHH--HHhccC--cHHHH
Confidence 3444 89999999999996643 699888873 233333321111 111111112222 333332 36778
Q ss_pred HHHHHHHHHHHHHHHHhC-Cc
Q 014724 376 QNKVVSNCRALASRLVEL-GY 395 (419)
Q Consensus 376 ~~~v~~n~~~l~~~L~~~-G~ 395 (419)
.++..+|+.+++++|++. ++
T Consensus 270 ~~~~~~~a~~~a~~L~~~p~v 290 (403)
T PRK07810 270 VRHSNASALRIAEFLEGHPAV 290 (403)
T ss_pred HHHHHHHHHHHHHHHhcCCCc
Confidence 899999999999999986 44
No 167
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.81 E-value=1.8e-18 Score=175.53 Aligned_cols=213 Identities=16% Similarity=0.150 Sum_probs=148.7
Q ss_pred hHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccc
Q 014724 144 EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY 223 (419)
Q Consensus 144 ~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~ 223 (419)
+...+|| +.+++++|.+. .+.++||+.|+.+++.++++|||+|+++++.|++.+.... ..+...|+
T Consensus 64 p~~~~Le----~~iA~~~g~~~-----~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~----~~~~~~G~- 129 (400)
T PRK06234 64 PTSTEVE----NKLALLEGGEA-----AVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLN----HGLTRYGV- 129 (400)
T ss_pred ccHHHHH----HHHHHHhCCCc-----EEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHH----HHHhhCCe-
Confidence 4456777 56788888754 3778899999999999999999999999988876542110 11223454
Q ss_pred cEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCChHHHHHHHHHh--CCEEEEeccccccccccCCcC
Q 014724 224 FESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVA 299 (419)
Q Consensus 224 ~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~dl~~I~~ia~~~--ga~livD~ah~~Gl~~~g~~~ 299 (419)
++..++. .|++++++.+.+ ++|+|++++|+||+ ..|+++|.++|+++ |+++++|++|..+.. .
T Consensus 130 -~v~~vd~------~d~e~l~~~i~~-~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livDea~~~~~~-----~ 196 (400)
T PRK06234 130 -EVTFVDT------SNLEEVRNALKA-NTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVDNTFCTPYI-----Q 196 (400)
T ss_pred -EEEEECC------CCHHHHHHHhcc-CCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEECCCCchhc-----C
Confidence 4444432 389999999875 79999999999984 57999999999997 999999999765533 2
Q ss_pred CCCC-CCcEEEeCCCCcCCCCC---eeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHH
Q 014724 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 375 (419)
Q Consensus 300 ~~~~-~~Div~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~ 375 (419)
.+++ ++|++++|++|++.|+. ||++++++ ++.+++.........|.......+. .++..+. .+..+
T Consensus 197 ~~l~~g~Divv~S~sK~l~g~g~~~gG~v~~~~------~~~~~l~~~~~~~~~g~~l~p~~a~--l~~~~l~--tl~~r 266 (400)
T PRK06234 197 RPLQLGADVVVHSATKYLNGHGDVIAGFVVGKE------EFINQVKLFGIKDMTGSVIGPFEAF--LIIRGMK--TLQIR 266 (400)
T ss_pred CchhhCCcEEEeeccccccCCCCceeEEEEecH------HHHHHHHHHHHHHhcCCCCCHHHHH--HHHhccC--cHHHH
Confidence 3444 78999999999996643 69999887 5655554311111111111111222 2233332 35567
Q ss_pred HHHHHHHHHHHHHHHHhC
Q 014724 376 QNKVVSNCRALASRLVEL 393 (419)
Q Consensus 376 ~~~v~~n~~~l~~~L~~~ 393 (419)
.+++.+|++++++.|+++
T Consensus 267 ~~~~~~na~~~a~~L~~~ 284 (400)
T PRK06234 267 MEKHCKNAMKVAKFLESH 284 (400)
T ss_pred HHHHHHHHHHHHHHHHcC
Confidence 788889999999999885
No 168
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.81 E-value=4.6e-18 Score=170.04 Aligned_cols=266 Identities=13% Similarity=0.090 Sum_probs=167.6
Q ss_pred hhcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChH-
Q 014724 102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS- 178 (419)
Q Consensus 102 ~~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt- 178 (419)
.+.++|..++|+ +|+.+++++.+.+.. . ..||.. + ..+ .++.++++++++++ +|++++|+
T Consensus 20 ~~~i~l~~~~~~~~~p~~~~~a~~~~~~~-~-~~y~~~----~---~~~----lr~~ia~~~~~~~~----~i~it~Ga~ 82 (356)
T PRK08056 20 DQLLDFSANINPLGMPVSLKRAIIDNLDC-A-ERYPDV----E---YRH----LHQALARHHQVPAS----WILAGNGET 82 (356)
T ss_pred hhEEEeccccCCCCCCHHHHHHHHHHHHh-c-ccCcCc----c---HHH----HHHHHHHHhCcChh----hEEECCCHH
Confidence 345888888875 689999999876542 1 134421 1 123 34667788898874 46677775
Q ss_pred HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCC-CCCCCHHHHHHHhhhcCCeEEEE
Q 014724 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIA 257 (419)
Q Consensus 179 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~-~~~iD~d~Le~~l~~~~pklIi~ 257 (419)
+++..++.++ .+|| +++++|.+..+.. .+...|. ++++++.+++ ++.+| +++++.+. .++|+|++
T Consensus 83 ~~l~~~~~~l-~~g~-viv~~P~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~~-~~~~~~~~-~~~k~v~l 148 (356)
T PRK08056 83 ESIFAVVSGL-KPRR-AMIVTPGFAEYRR--------ALQQVGC--EIRRYSLREADGWQLT-DAILEALT-PDLDCLFL 148 (356)
T ss_pred HHHHHHHHHh-CCCC-EEEeCCCcHHHHH--------HHHHcCC--eEEEEecccccCCCcc-HHHHHhcc-CCCCEEEE
Confidence 6888888776 7786 5666776544321 2234565 4445545432 34666 34555554 57899999
Q ss_pred cCCCCCC--cCC---hHHHHHHHHHhCCEEEEeccccccccccCC-cCCCCC--CCcEEEeCCCCcC--CCCCeeEEEEe
Q 014724 258 GASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASV-VADPFK--YCDVVTTTTHKSL--RGPRGGMIFFK 327 (419)
Q Consensus 258 ~~s~~p~--~~d---l~~I~~ia~~~ga~livD~ah~~Gl~~~g~-~~~~~~--~~Div~~S~hK~l--~GprgG~i~~~ 327 (419)
++|+||+ ..+ +++|+++|+++|++||+|+++ .++...+. ....+. ...++++|+||+| +|.|.||++.+
T Consensus 149 ~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~ 227 (356)
T PRK08056 149 CTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAF-IDFIPDETGFIPQLADNPHLWVLRSLTKFYAIPGLRLGYLVNS 227 (356)
T ss_pred eCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecch-hccCCcchHHHHHhccCCCEEEEEechhhccCcchhheeeecC
Confidence 9999995 344 778999999999999999994 45543321 111222 2458899999986 78899999985
Q ss_pred CCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHH-HHHHHHHHHHHHHHHHHHHhC-CcEEecCCCcce
Q 014724 328 KDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF-KVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNH 405 (419)
Q Consensus 328 ~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~-~~~~~~v~~n~~~l~~~L~~~-G~~v~~~~t~~h 405 (419)
++ ++.+.+.....++ +.+.....+...++ ..+++ ++..+++.++++++.+.|++. |+.+.+ ++..
T Consensus 228 ~~-----~~~~~l~~~~~~~---~~~~~~~~~a~~~l---~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~--~~~~ 294 (356)
T PRK08056 228 DD-----AAVARMRRQQMPW---SINAFAALAGEVIL---QDRAYQQATWQWLAEEGARFYQALCALPLLTVWP--GRAN 294 (356)
T ss_pred CH-----HHHHHHHHhCCCC---chhHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcC--CCCc
Confidence 43 4555555432221 11111111111122 12233 455677888899999999886 777664 3456
Q ss_pred eEEEEeC
Q 014724 406 LVLVDLR 412 (419)
Q Consensus 406 lv~vd~~ 412 (419)
++|+++.
T Consensus 295 ~~~~~~~ 301 (356)
T PRK08056 295 YLFLRCE 301 (356)
T ss_pred EEEEEcC
Confidence 7898875
No 169
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.80 E-value=2.7e-18 Score=172.76 Aligned_cols=212 Identities=16% Similarity=0.090 Sum_probs=146.6
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccc
Q 014724 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (419)
Q Consensus 142 g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g 221 (419)
||+....+| +.++++.|.+. + ++++||+.|+..++.++++|||+|+++++.|++..... . ......|
T Consensus 48 gnPt~~~lE----~~lA~l~g~~~----~-~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~--~--~~~~~~g 114 (377)
T TIGR01324 48 GTLTHFALQ----DAMCELEGGAG----C-YLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRYFC--D--IVLKRMG 114 (377)
T ss_pred CCccHHHHH----HHHHHHhCCCc----E-EEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHH--H--HHHHhcC
Confidence 666677888 56778888765 3 67889999999999999999999999988875532100 0 0112234
Q ss_pred cccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcC
Q 014724 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (419)
Q Consensus 222 ~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~ 299 (419)
. ++..++.+ +.+.+++.+++ ++|+|++++|+||+ ..|+++|+++|+++|+++++|++|..|..+
T Consensus 115 i--~v~~~d~~------~~e~l~~~i~~-~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD~t~a~g~~~----- 180 (377)
T TIGR01324 115 V--DITYYDPL------IGEDIATLIQP-NTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMIDNTWAAGLLF----- 180 (377)
T ss_pred c--EEEEECCC------CHHHHHHhcCC-CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcccccc-----
Confidence 3 33333221 23788888864 79999999998884 568999999999999999999999877653
Q ss_pred CCCC-CCcEEEeCCCCcCCCCC---eeEEEEeCCCcchhhHHHHhhhcc-cCCCCCCChHHHHHHHHHHHHHhcChHHHH
Q 014724 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAV-FPGLQGGPHNHTIGGLAVCLKHAQSPEFKV 374 (419)
Q Consensus 300 ~~~~-~~Div~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~-~~~~~g~p~~~~iaala~al~~~~~~~~~~ 374 (419)
.|++ ++|++++|++|++.|+. ||+++.++ +..+++.... ..+..-+| ..+. ..++.+. .+..
T Consensus 181 ~pl~~gaDivv~S~tK~l~G~~d~~gG~v~~~~------~~~~~l~~~~~~~G~~l~p----~~a~-~~~rgl~--tl~~ 247 (377)
T TIGR01324 181 KPLEHGVDISIQAGTKYLVGHSDIMIGTVVANA------RTWDQLREHSYLMGQMVDA----DDAY-TTLRGLR--TLGV 247 (377)
T ss_pred CccccCceEEEecCceeccCCCCceEEEEEeCH------HHHHHHHHHHHHhCCCCCH----HHHH-HHHhhhh--hHHH
Confidence 3455 89999999999998764 58888776 4444443221 11211122 1111 1222222 3456
Q ss_pred HHHHHHHHHHHHHHHHHhC
Q 014724 375 YQNKVVSNCRALASRLVEL 393 (419)
Q Consensus 375 ~~~~v~~n~~~l~~~L~~~ 393 (419)
+.+++.+|+..+++.|+++
T Consensus 248 R~~~~~~~a~~la~~L~~~ 266 (377)
T TIGR01324 248 RLKQHQESSLAIAKWLSEQ 266 (377)
T ss_pred HHHHHHHHHHHHHHHHHhC
Confidence 6888999999999999986
No 170
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.80 E-value=2.1e-18 Score=173.37 Aligned_cols=214 Identities=21% Similarity=0.208 Sum_probs=151.7
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccc
Q 014724 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (419)
Q Consensus 142 g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g 221 (419)
+++...++| +++++++|.+. .++++||+.|+..++.++++|||+|++..+.|++...... ......|
T Consensus 38 ~~p~~~~le----~~la~l~g~~~-----a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~----~~~~~~g 104 (369)
T cd00614 38 GNPTVDALE----KKLAALEGGEA-----ALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFE----RLLPKLG 104 (369)
T ss_pred CChhHHHHH----HHHHHHHCCCC-----EEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHHH----HHHhhcC
Confidence 456667777 56788888765 3778999999999999999999999999988776531100 0112334
Q ss_pred cccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcC
Q 014724 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (419)
Q Consensus 222 ~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~ 299 (419)
. ++..++. -|++++++.+++ ++|+|++.+++||+ ..|+++|.++|+++|+++++|++|..+.. .
T Consensus 105 ~--~~~~v~~------~d~~~l~~~i~~-~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD~t~~~~~~-----~ 170 (369)
T cd00614 105 I--EVTFVDP------DDPEALEAAIKP-ETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNTFATPYL-----Q 170 (369)
T ss_pred e--EEEEeCC------CCHHHHHHhcCC-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcchhc-----C
Confidence 3 4444332 268999999865 78999999888874 57999999999999999999999876643 2
Q ss_pred CCCC-CCcEEEeCCCCcCCCC---CeeEEEEeCCCcchhhHHHHhhhccc-CCCCCCChHHHHHHHHHHHHHhcChHHHH
Q 014724 300 DPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDPVLGVELESAINNAVF-PGLQGGPHNHTIGGLAVCLKHAQSPEFKV 374 (419)
Q Consensus 300 ~~~~-~~Div~~S~hK~l~Gp---rgG~i~~~~~~~~~~~l~~~i~~~~~-~~~~g~p~~~~iaala~al~~~~~~~~~~ 374 (419)
.+++ ++|++++|++|++.|+ ++|+++++++ ++.+++..... .+. .... ..+ +.++..+. .+..
T Consensus 171 ~~~~~g~Divv~S~tK~l~g~~~~~gG~v~~~~~-----~l~~~l~~~~~~~g~--~~~p--~~a-~~~l~~l~--tl~~ 238 (369)
T cd00614 171 RPLELGADIVVHSATKYIGGHSDVIAGVVVGSGE-----ALIQRLRFLRLALGT--ILSP--FDA-WLLLRGLK--TLPL 238 (369)
T ss_pred ChhhhCCcEEEeccceeccCCCCceEEEEEeCcH-----HHHHHHHHHHHhhCC--CCCH--HHH-HHHHcCCC--CHHH
Confidence 3455 7999999999999764 4899999773 45555543221 111 1111 111 11233332 3556
Q ss_pred HHHHHHHHHHHHHHHHHhCC
Q 014724 375 YQNKVVSNCRALASRLVELG 394 (419)
Q Consensus 375 ~~~~v~~n~~~l~~~L~~~G 394 (419)
+.+++.+|+++++++|++.+
T Consensus 239 r~~~~~~na~~la~~L~~~~ 258 (369)
T cd00614 239 RMERHSENALKVAEFLEKHP 258 (369)
T ss_pred HHHHHHHHHHHHHHHHHcCC
Confidence 78889999999999999874
No 171
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.80 E-value=4.3e-18 Score=172.50 Aligned_cols=213 Identities=20% Similarity=0.209 Sum_probs=149.2
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccc
Q 014724 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (419)
Q Consensus 142 g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g 221 (419)
+++..+++| +++++++|.+. .+.++||+.|+..++.++++|||+|++.++.|++...... ..+...|
T Consensus 62 ~~p~~~~le----~~lA~l~g~~~-----~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~----~~~~~~G 128 (398)
T PRK08249 62 TNPTVQAFE----EKVRILEGAEA-----ATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFT----EFLPRMG 128 (398)
T ss_pred CChHHHHHH----HHHHHHhCCCe-----EEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHH----HHHhhCC
Confidence 445566666 67888999765 3788999999999999999999999999998876421100 0112234
Q ss_pred cccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcC
Q 014724 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (419)
Q Consensus 222 ~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~ 299 (419)
+ ++..++ ..|++++++.+++ ++|+|+++.|+||+ ..|+++|.++|+++|+++++|++|..+.. .
T Consensus 129 i--~v~~vd------~~d~e~l~~~i~~-~tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD~t~a~~~~-----~ 194 (398)
T PRK08249 129 V--DVTLCE------TGDHEQIEAEIAK-GCDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVDNTFATPIN-----Q 194 (398)
T ss_pred e--EEEEcC------CCCHHHHHHhcCC-CCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCcCcccc-----C
Confidence 3 443332 3689999999875 79999999999984 67999999999999999999999765432 1
Q ss_pred CCCC-CCcEEEeCCCCcCCCCC---eeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHH
Q 014724 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 375 (419)
Q Consensus 300 ~~~~-~~Div~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~ 375 (419)
.++. ++|++++|+||++.|+. ||+++.++ ++.+++...... .|.......+.+ ++..+ +.+..+
T Consensus 195 ~~l~~~~Divv~S~sK~l~g~~~~~gG~vv~~~------~l~~~l~~~~~~--~g~~~s~~~a~l--~l~~l--~tL~~R 262 (398)
T PRK08249 195 NPLALGADLVIHSATKFLSGHADALGGVVCGSK------ELMEQVYHYREI--NGATMDPMSAYL--ILRGM--KTLKLR 262 (398)
T ss_pred CchhhCCCEEeccCceecCCCCCceEEEEECCH------HHHHHHHHHHHh--cCCCCCHHHHHH--HHhCc--chHHHH
Confidence 2334 79999999999997653 58877765 566655432211 111111112222 23332 235667
Q ss_pred HHHHHHHHHHHHHHHHhC
Q 014724 376 QNKVVSNCRALASRLVEL 393 (419)
Q Consensus 376 ~~~v~~n~~~l~~~L~~~ 393 (419)
.+++.+|++.+.++|++.
T Consensus 263 ~~~~~~na~~la~~L~~~ 280 (398)
T PRK08249 263 VRQQQESAMALAKYLQTH 280 (398)
T ss_pred HHHHHHHHHHHHHHHHcC
Confidence 788999999999999986
No 172
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.80 E-value=4.2e-18 Score=171.00 Aligned_cols=216 Identities=19% Similarity=0.193 Sum_probs=149.7
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccc
Q 014724 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (419)
Q Consensus 142 g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g 221 (419)
+++...+|| +.+++++|.+. .+.++||+.|+.+++ ++++|||+|++.++.|++.+.... ..+...|
T Consensus 50 ~~pt~~~le----~~la~l~g~~~-----~~~~~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~~----~~~~~~G 115 (366)
T PRK08247 50 GNPTRGVLE----QAIADLEGGDQ-----GFACSSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLFE----EHWKKWN 115 (366)
T ss_pred CCchHHHHH----HHHHHHhCCCc-----EEEEcCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHHH----HHhhccC
Confidence 445566777 57889999976 277889999998765 688999999999998876432100 0112344
Q ss_pred cccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcC
Q 014724 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (419)
Q Consensus 222 ~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~ 299 (419)
+ ++..++. .|++++++.+++ ++|+|++++|+||+ ..|+++|.++|+++|+++++|+++..++. .
T Consensus 116 ~--~v~~vd~------~d~~~l~~~i~~-~tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD~t~~~~~~-----~ 181 (366)
T PRK08247 116 V--RFVYVNT------ASLKAIEQAITP-NTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFYTPVL-----Q 181 (366)
T ss_pred c--eEEEECC------CCHHHHHHhccc-CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccc-----c
Confidence 4 4444332 489999999875 79999999999985 46899999999999999999999755433 2
Q ss_pred CCCC-CCcEEEeCCCCcCCCC---CeeEEEEeCCCcchhhHHHHhhhcccC-CCCCCChHHHHHHHHHHHHHhcChHHHH
Q 014724 300 DPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDPVLGVELESAINNAVFP-GLQGGPHNHTIGGLAVCLKHAQSPEFKV 374 (419)
Q Consensus 300 ~~~~-~~Div~~S~hK~l~Gp---rgG~i~~~~~~~~~~~l~~~i~~~~~~-~~~g~p~~~~iaala~al~~~~~~~~~~ 374 (419)
.|++ ++|++++|++|++.|+ ++|+++.+++ ++.+++...... +...+| ..+ ..++..+. .+..
T Consensus 182 ~p~~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~-----~l~~~~~~~~~~~g~~~s~----~~a-~l~~~~l~--tl~~ 249 (366)
T PRK08247 182 RPLEEGADIVIHSATKYLGGHNDVLAGLVVAKGQ-----ELCERLAYYQNAAGAVLSP----FDS-WLLIRGMK--TLAL 249 (366)
T ss_pred CchhcCCcEEEeecceeccCCCceeeeEEecChH-----HHHHHHHHHHHhcCCCCCh----HHH-HHHHhccC--cHHH
Confidence 3444 7899999999999876 6799888753 565555432211 111112 111 11222222 3456
Q ss_pred HHHHHHHHHHHHHHHHHhC-CcEE
Q 014724 375 YQNKVVSNCRALASRLVEL-GYKL 397 (419)
Q Consensus 375 ~~~~v~~n~~~l~~~L~~~-G~~v 397 (419)
..+++.+|++.+++.|++. ++..
T Consensus 250 r~~~~~~~a~~l~~~L~~~p~v~~ 273 (366)
T PRK08247 250 RMRQHEENAKAIAAFLNEQPGVTD 273 (366)
T ss_pred HHHHHHHHHHHHHHHHHhCCCeeE
Confidence 6778899999999999986 7764
No 173
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.80 E-value=1e-17 Score=167.96 Aligned_cols=289 Identities=14% Similarity=0.093 Sum_probs=178.4
Q ss_pred hhccccccChhHHHHHHHHHH-HhhhcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHH
Q 014724 79 VDYSLGEADPEVCEIITKEKE-RQFKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQK 155 (419)
Q Consensus 79 ~~~~l~~~~~~~~~~~~~e~~-r~~~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~ 155 (419)
+++++...++..+.-+..... .....++|..++.. .++.+++++.+.... .+|+. ..|. .++++.+.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~---~~Y~~---~~G~---~~lr~~ia~ 73 (364)
T PRK07865 3 VSARLPDFPWDTLAPAKATAAAHPDGIVDLSVGTPVDPVPPVIQEALAAAADA---PGYPT---TAGT---PELREAIVG 73 (364)
T ss_pred ccccCCCccHHHHHHHHHHHHhcCCCEEEcCCCCCCCCCCHHHHHHHHHHHhh---CCCCC---ccCC---HHHHHHHHH
Confidence 356677777776655543332 22456788776532 367888888664421 13432 1232 356667778
Q ss_pred HHHHHcCCC-CCCCceeEecCChH-HHHHHHHHHc-cCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccC
Q 014724 156 RALAAFNLD-ENKWGVNVQPLSGS-PANFEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD 232 (419)
Q Consensus 156 ~la~~~g~~-~~~~~v~V~~~sGt-~A~~~~~~al-l~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~ 232 (419)
++.+.+|.+ .+. .+|++++|+ +|+..++.++ ++|||.|++++|.|.++.. .+...|. +++.++
T Consensus 74 ~l~~~~~~~~~~~--~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~--------~~~~~g~--~~~~~~-- 139 (364)
T PRK07865 74 WLARRRGVTGLDP--AAVLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYPTYEV--------GARLAGA--TVVRAD-- 139 (364)
T ss_pred HHHHHcCCCCCCc--ccEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcccHHH--------HHHhcCC--EEEecC--
Confidence 888777754 221 247778875 5888877777 7999999999998876532 1233454 444432
Q ss_pred CCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCCc--C---ChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC----
Q 014724 233 ESTGLVDYDMLEKTAILFRPKLIIAGASAYPRD--F---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK---- 303 (419)
Q Consensus 233 ~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~~--~---dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~---- 303 (419)
++++++ ..++|+|++++|+||+- . ++++|.++|+++|++||+|++|. .+.+.+.....+.
T Consensus 140 ------~~~~l~----~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~ 208 (364)
T PRK07865 140 ------SLTELG----PQRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYL-ELGWDAEPVSILDPRVC 208 (364)
T ss_pred ------ChhhCC----cccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchh-hhccCCCCCcccccccc
Confidence 223322 24789999989999952 3 46788899999999999999964 4444331111111
Q ss_pred ----CCcEEEeCCCCcC--CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHH
Q 014724 304 ----YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQN 377 (419)
Q Consensus 304 ----~~Div~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~ 377 (419)
...++++|++|.| +|.|+||+++++ ++.+.+...........+... ..++..++.. ....++.++
T Consensus 209 ~~~~~~~i~~~S~SK~~~~~GlRiG~i~~~~------~~~~~~~~~~~~~~~~~~~~~-q~~~~~~l~~--~~~~~~~~~ 279 (364)
T PRK07865 209 GGDHTGLLAVHSLSKQSNLAGYRAGFVAGDP------ALVAELLEVRKHAGMMVPAPV-QAAMVAALGD--DAHVREQRE 279 (364)
T ss_pred CCccceEEEEeechhccCCCceeeEEEecCH------HHHHHHHHHHHhcCCCcCHHH-HHHHHHHhCC--HHHHHHHHH
Confidence 1238899999986 789999999876 566665543221111222222 2222223322 123456667
Q ss_pred HHHHHHHHHHHHHHhCCcEEecCCCcceeEEEEe
Q 014724 378 KVVSNCRALASRLVELGYKLVSGGSDNHLVLVDL 411 (419)
Q Consensus 378 ~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~vd~ 411 (419)
.+.++++.+.+.|++.|+.+..+ ..+.++|+++
T Consensus 280 ~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~~~ 312 (364)
T PRK07865 280 RYARRRAVLRPALEAAGFRVDHS-EAGLYLWATR 312 (364)
T ss_pred HHHHHHHHHHHHHHHcCCcccCC-CccEEEEEeC
Confidence 77888899999999989876543 2345688876
No 174
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.80 E-value=5.5e-18 Score=174.23 Aligned_cols=287 Identities=15% Similarity=0.117 Sum_probs=178.5
Q ss_pred cccccccCCCC-hHHHHHHHhhhhhc-----cCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcC----CCCCCCceeEe
Q 014724 104 SLELIASENFT-SRAVMEAVGSCLTN-----KYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN----LDENKWGVNVQ 173 (419)
Q Consensus 104 ~i~L~~sen~~-~~~V~eal~~~l~~-----~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g----~~~~~~~v~V~ 173 (419)
.|+|.-.||.+ .+.+.+.+.+.... .+......-.+|.+......|.+.+.+++.+.+| ++++ +|+
T Consensus 49 ~i~l~~aeN~l~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p~----~Iv 124 (447)
T PLN02607 49 VIQMGLAENQVSFDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGKARFDPD----RIV 124 (447)
T ss_pred eEEEechhhhhhHHHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhcCCCCCcCHH----HeE
Confidence 58998899875 55566655443210 0000000001222222234676677777877776 3443 466
Q ss_pred cCCh-HHHHHHHHHHccCCCCEEEEeCCCCCccccCcccccccccc-ccccccEEEecccCCC-CCCCCHHHHHHHhhh-
Q 014724 174 PLSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVS-GTSIYFESMPYRLDES-TGLVDYDMLEKTAIL- 249 (419)
Q Consensus 174 ~~sG-t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~-~~g~~~~~v~~~~~~~-~~~iD~d~Le~~l~~- 249 (419)
+++| ++|+.+++.++++|||.|+++.|.|+++.. .+. ..|. ++++++++++ ++.+|++++++++++
T Consensus 125 it~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~--------~~~~~~g~--~vv~v~~~~~~~f~~~~~~le~a~~~a 194 (447)
T PLN02607 125 LTAGATAANELLTFILADPGDALLVPTPYYPGFDR--------DLRWRTGV--KIVPIHCDSSNNFQVTPQALEAAYQEA 194 (447)
T ss_pred EcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHH--------HHHhcCCc--EEEEEeCCCCCCCcCCHHHHHHHHHHH
Confidence 7777 569999999999999999999998877642 122 2344 5566666533 457999999998864
Q ss_pred ----cCCeEEEEcCCCCCC--cC---ChHHHHHHHHHhCCEEEEeccccccccccCC-cCCCC------C--C-Cc--EE
Q 014724 250 ----FRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASV-VADPF------K--Y-CD--VV 308 (419)
Q Consensus 250 ----~~pklIi~~~s~~p~--~~---dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~-~~~~~------~--~-~D--iv 308 (419)
.++|+|++++|+||+ .. .+++|.++|++||++||+|+++ .+.++.+. +.+.. + . .+ ++
T Consensus 195 ~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiY-a~~~f~~~~f~S~~s~~~~~~~~~~~~~v~v 273 (447)
T PLN02607 195 EAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIY-SGSVFSASEFVSVAEIVEARGYKGVAERVHI 273 (447)
T ss_pred HHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccc-cccccCCCCcccHHHHHhhcCCCCCcCcEEE
Confidence 368899999999995 23 3788999999999999999994 55554321 11111 0 1 12 67
Q ss_pred EeCCCCcC--CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHh--cChHHHHHHHHHHHHHH
Q 014724 309 TTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHA--QSPEFKVYQNKVVSNCR 384 (419)
Q Consensus 309 ~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~--~~~~~~~~~~~v~~n~~ 384 (419)
+.|++|.| +|.|.|++++..+ ++...+....... +.++. ...+++..|..- .+..++...+++.++++
T Consensus 274 i~s~SK~fg~~GlRvG~ivs~n~-----~l~~~~~~~~~~~--~~s~~-~q~~~~~~L~d~~~~~~~l~~~r~~l~~~~~ 345 (447)
T PLN02607 274 VYSLSKDLGLPGFRVGTIYSYND-----KVVTTARRMSSFT--LVSSQ-TQHLLASMLSDEEFTENYIRTNRERLRKRYE 345 (447)
T ss_pred EEcchhcCCCCcceEEEEEEcCH-----HHHHHHHHHhhcC--CCCHH-HHHHHHHHhCCchhHHHHHHHHHHHHHHHHH
Confidence 89999986 7889999998442 5655554332111 11121 122222222221 00112445666777888
Q ss_pred HHHHHHHhCCcEEecCCCcceeEEEEeCCc
Q 014724 385 ALASRLVELGYKLVSGGSDNHLVLVDLRPM 414 (419)
Q Consensus 385 ~l~~~L~~~G~~v~~~~t~~hlv~vd~~~~ 414 (419)
.+.+.|++.|+++.. .....++|+|+++.
T Consensus 346 ~~~~~L~~~gi~~~~-~~ag~fvw~~L~~~ 374 (447)
T PLN02607 346 MIVQGLRRAGIECLK-GNAGLFCWMNLSPL 374 (447)
T ss_pred HHHHHHHhCCCCccc-CCeeEEEEEEchHh
Confidence 899999999987654 34567899999753
No 175
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.80 E-value=4.1e-18 Score=172.82 Aligned_cols=308 Identities=15% Similarity=0.158 Sum_probs=176.8
Q ss_pred ccccChhHHHHHHHHHHH--hhhccccccc----CCC-Ch--HHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHH
Q 014724 83 LGEADPEVCEIITKEKER--QFKSLELIAS----ENF-TS--RAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLC 153 (419)
Q Consensus 83 l~~~~~~~~~~~~~e~~r--~~~~i~L~~s----en~-~~--~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~ 153 (419)
+...++..+..+....++ ....|+|..+ +++ +| +.+.+++.+.+......+|+. ..|.. ++.+.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~---~~G~~---~lR~ai 78 (396)
T PRK09257 5 LEAAPADPILGLMEAFRADPRPDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLP---IEGLA---AYRQAV 78 (396)
T ss_pred CCCCCCChHHHHHHHHhhCCCcCcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCC---CCCCH---HHHHHH
Confidence 344555433333333332 2456888776 222 34 788888877654322223432 23433 566666
Q ss_pred HHHHHHHcCC--CCCCCceeEecCCh-HHHHHHHHHHc--cCCCCEEEEeCCCCCccccCccccccccccccccccEEEe
Q 014724 154 QKRALAAFNL--DENKWGVNVQPLSG-SPANFEVYTAI--LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMP 228 (419)
Q Consensus 154 ~~~la~~~g~--~~~~~~v~V~~~sG-t~A~~~~~~al--l~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~ 228 (419)
.+++.+..+. ++++ +.|++|+| ++|+..++.++ ++|||+|++.+|.|.++.. .+...|.. +++
T Consensus 79 a~~~~~~~~~~~~~~~--i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~--------~~~~~g~~--~v~ 146 (396)
T PRK09257 79 QELLFGADSPALAAGR--VATVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRA--------IFEAAGLE--VKT 146 (396)
T ss_pred HHHhcCCCCcccccCe--EEEEecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHH--------HHHHcCCc--EEE
Confidence 6666554332 3321 22366776 57998887655 5899999999998877642 23455654 444
Q ss_pred ccc-CCCCCCCCHHHHHHHhhhcC--CeEEEEcCCCCCCc-----CChHHHHHHHHHhCCEEEEecccccccccc-CC-c
Q 014724 229 YRL-DESTGLVDYDMLEKTAILFR--PKLIIAGASAYPRD-----FDYPRMRQIADAVGALLMMDMAHISGLVAA-SV-V 298 (419)
Q Consensus 229 ~~~-~~~~~~iD~d~Le~~l~~~~--pklIi~~~s~~p~~-----~dl~~I~~ia~~~ga~livD~ah~~Gl~~~-g~-~ 298 (419)
++. +++++.+|+|.+++.+++.+ .+++++++++||+- ..+++|.++|++||++||+|++ |.++.+. +. .
T Consensus 147 v~~~~~~~~~~d~~~l~~~~~~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~-Y~~l~~~~~~~~ 225 (396)
T PRK09257 147 YPYYDAATKGLDFDAMLADLSQAPAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIA-YQGFGDGLEEDA 225 (396)
T ss_pred EeccccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecc-ccccccchHHHH
Confidence 444 33457899999999886433 34666788999962 2468899999999999999999 4555532 11 1
Q ss_pred CCC--CC--C-CcEEEeCCCCcC--CCCCeeEEEE--eCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHh--
Q 014724 299 ADP--FK--Y-CDVVTTTTHKSL--RGPRGGMIFF--KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHA-- 367 (419)
Q Consensus 299 ~~~--~~--~-~Div~~S~hK~l--~GprgG~i~~--~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~-- 367 (419)
... +. + .-|+++|+||+| +|+|.||++. ..... ..++...+........ .+++.....+++..+..-
T Consensus 226 ~~~~~~~~~~~~vi~i~SfSK~~~~~GlRiG~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~q~~~~~~l~~~~~ 303 (396)
T PRK09257 226 YGLRAFAAAGLELLVASSFSKNFGLYGERVGALSVVAEDAEE-ADRVLSQLKATIRTNY-SNPPAHGAAIVATILNDPEL 303 (396)
T ss_pred HHHHHHHhcCCcEEEEEEcCCcCccccccceeEEEEeCCHHH-HHHHHHHHHHHhhhhc-CCCcHHHHHHHHHHhCCHHH
Confidence 110 11 1 127799999987 4999999974 22100 0012233322211111 122222222222222210
Q ss_pred ---cChHHHHHHHHHHHHHHHHHHHHHhCC----cEEecCCCcceeEEEEeC
Q 014724 368 ---QSPEFKVYQNKVVSNCRALASRLVELG----YKLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 368 ---~~~~~~~~~~~v~~n~~~l~~~L~~~G----~~v~~~~t~~hlv~vd~~ 412 (419)
.....++.++++.++++.+.+.|++.+ +++.. ......+|++++
T Consensus 304 ~~~~~~~~~~~r~~~~~rr~~l~~~L~~~~~~~~~~~~~-p~gg~~~w~~l~ 354 (396)
T PRK09257 304 RAEWEAELEEMRERIKAMRQLLVEALKAKGPSRDFDFIA-RQRGMFSYSGLT 354 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccc-ccceEEEecCCC
Confidence 012334567778888999999998875 44433 223456888774
No 176
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.80 E-value=1.9e-17 Score=166.72 Aligned_cols=258 Identities=11% Similarity=0.094 Sum_probs=165.2
Q ss_pred hHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHc-cCCCC
Q 014724 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPHD 193 (419)
Q Consensus 115 ~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~al-l~pGD 193 (419)
++.-++++.+.+...+..| ..+..+++| +++++++|.+. + +.++||+.|+.+++.++ ++|||
T Consensus 10 ~~~~~~~~~~~l~~~~~~g--------~~~~~~~~e----~~la~~~g~~~----~-v~~~sgt~al~~~l~~~~~~~Gd 72 (375)
T PRK11706 10 VGTELDYIQQAMSSGKLCG--------DGGFTRRCQ----QWLEQRFGSAK----V-LLTPSCTAALEMAALLLDIQPGD 72 (375)
T ss_pred CHHHHHHHHHHHHcCCccC--------CCHHHHHHH----HHHHHHhCCCe----E-EEECCHHHHHHHHHHHhCCCCCC
Confidence 3444666666665432111 113344555 66788888864 2 66778899998877766 79999
Q ss_pred EEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCCcCChHHHHH
Q 014724 194 RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQ 273 (419)
Q Consensus 194 ~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~~~dl~~I~~ 273 (419)
+|+++.++|.+... .+...|. +++.++++++++.+|++++++.+++ ++|+|++.++ ++...|+++|.+
T Consensus 73 ~Viv~~~t~~~~~~--------~~~~~G~--~~v~~d~d~~~~~~d~~~le~~i~~-~tk~i~~~~~-~G~~~~~~~i~~ 140 (375)
T PRK11706 73 EVIMPSYTFVSTAN--------AFVLRGA--KIVFVDIRPDTMNIDETLIEAAITP-KTRAIVPVHY-AGVACEMDTIMA 140 (375)
T ss_pred EEEECCCCcHHHHH--------HHHHcCC--EEEEEecCCCcCCcCHHHHHHhcCC-CCeEEEEeCC-CCCccCHHHHHH
Confidence 99999988766532 2344565 5666667766678999999999875 7898887653 566689999999
Q ss_pred HHHHhCCEEEEeccccccccccCCcCCCCC-CCcEEEeCCC--CcCCCCCeeEEEEeCCCcchhhHHHHhhhcccCC---
Q 014724 274 IADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTH--KSLRGPRGGMIFFKKDPVLGVELESAINNAVFPG--- 347 (419)
Q Consensus 274 ia~~~ga~livD~ah~~Gl~~~g~~~~~~~-~~Div~~S~h--K~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~--- 347 (419)
+|+++|++||+|++|+.|....+. ++. ..|+.++|+| |.++...||+++++++ ++.+++......+
T Consensus 141 la~~~~i~vIeD~a~a~g~~~~~~---~~g~~~~~~~~Sf~~~K~l~~g~gG~~~~~~~-----~~~~~~~~~~~~g~~~ 212 (375)
T PRK11706 141 LAKKHNLFVVEDAAQGVMSTYKGR---ALGTIGHIGCFSFHETKNYTAGEGGALLINDP-----ALIERAEIIREKGTNR 212 (375)
T ss_pred HHHHcCCEEEEECccccccccCCe---eeecCcCEEEEeCCCCccccccCCeEEEECCH-----HHHHHHHHHHHcCCCc
Confidence 999999999999999887543321 222 4688888888 9986556677777664 5554433211100
Q ss_pred -------------C-CC-CChH-HHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC---C-cEEe--cCC--Cc
Q 014724 348 -------------L-QG-GPHN-HTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL---G-YKLV--SGG--SD 403 (419)
Q Consensus 348 -------------~-~g-~p~~-~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~---G-~~v~--~~~--t~ 403 (419)
. .| +..+ ...+++ ++.++. .+++..++.+++.+++.+.|.+. | +.+. +++ ..
T Consensus 213 ~~~~~~~~~~~~~~~~g~~~~~~~~~aa~--~~~ql~--~l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~ 288 (375)
T PRK11706 213 SQFFRGQVDKYTWVDIGSSYLPSELQAAY--LWAQLE--AADRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHN 288 (375)
T ss_pred chhhccCCCcceeeecccccCcCHHHHHH--HHHHHH--HHHHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCcee
Confidence 0 01 1111 223333 333332 35667777788888888888765 2 3322 111 23
Q ss_pred ceeEEEEeCC
Q 014724 404 NHLVLVDLRP 413 (419)
Q Consensus 404 ~hlv~vd~~~ 413 (419)
.|++++.+.+
T Consensus 289 ~~~~~~~~~~ 298 (375)
T PRK11706 289 AHMFYIKLRD 298 (375)
T ss_pred eEEEEEEECC
Confidence 5677776643
No 177
>PRK03321 putative aminotransferase; Provisional
Probab=99.80 E-value=3.3e-18 Score=170.54 Aligned_cols=267 Identities=19% Similarity=0.177 Sum_probs=175.9
Q ss_pred hcccccccCC-C-ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChH-H
Q 014724 103 KSLELIASEN-F-TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 179 (419)
Q Consensus 103 ~~i~L~~sen-~-~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt-~ 179 (419)
+.|+|..+++ + +++.+++++.+.+.. . ..|+. .| ..+++ +.++++++++++ +|++++|+ +
T Consensus 23 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~-~-~~y~~----~g---~~~lr----~~ia~~~~~~~~----~I~~~~G~~~ 85 (352)
T PRK03321 23 GAIKLSSNETPFGPLPSVRAAIARAAAG-V-NRYPD----MG---AVELR----AALAEHLGVPPE----HVAVGCGSVA 85 (352)
T ss_pred cceeccCCCCCCCCCHHHHHHHHHHHHh-c-CcCCC----Cc---HHHHH----HHHHHHhCcCHH----HEEECCCHHH
Confidence 3577777764 3 578899999876642 2 23432 12 23444 567788888763 46677886 4
Q ss_pred HHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcC
Q 014724 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 259 (419)
Q Consensus 180 A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~ 259 (419)
++..++.++++|||+|+++.|.+..+.. .+...|. +.+.++.++ ++.+|++++++.+++ ++|+|++++
T Consensus 86 ~l~~~~~~~~~~gd~Vli~~p~y~~~~~--------~~~~~g~--~~~~v~~~~-~~~~~~~~l~~~~~~-~~~~v~l~~ 153 (352)
T PRK03321 86 LCQQLVQATAGPGDEVIFAWRSFEAYPI--------LVQVAGA--TPVQVPLTP-DHTHDLDAMAAAITD-RTRLIFVCN 153 (352)
T ss_pred HHHHHHHHhcCCCCEEEeCCCCHHHHHH--------HHHHcCC--EEEEccCCC-CCCCCHHHHHHhhcc-CCCEEEEeC
Confidence 7778888889999999999887544321 1233454 555555553 478999999998864 789999888
Q ss_pred CCCCC--cCChHHHHHHHHH--hCCEEEEeccccccccccCCcCCCCC----CCc-EEEeCCCCcC--CCCCeeEEEEeC
Q 014724 260 SAYPR--DFDYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPFK----YCD-VVTTTTHKSL--RGPRGGMIFFKK 328 (419)
Q Consensus 260 s~~p~--~~dl~~I~~ia~~--~ga~livD~ah~~Gl~~~g~~~~~~~----~~D-iv~~S~hK~l--~GprgG~i~~~~ 328 (419)
|+||+ ..+.++|.++|+. +|++|++|++| .++.+.+..+.++. ..+ ++++|++|+| +|.|.||+++++
T Consensus 154 p~NPtG~~~~~~~l~~l~~~~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~ 232 (352)
T PRK03321 154 PNNPTGTVVTPAELARFLDAVPADVLVVLDEAY-VEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGHP 232 (352)
T ss_pred CCCCcCCCcCHHHHHHHHHhCCCCeEEEEechH-HHhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCCH
Confidence 99985 5688999999987 59999999995 45444332212221 223 6789999987 588999999886
Q ss_pred CCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeEE
Q 014724 329 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVL 408 (419)
Q Consensus 329 ~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~ 408 (419)
++.+.+.....+. +.+.. ...+...++.. .+.+.+..+++.++++.+.+.|++.|+.+.+ ....++|
T Consensus 233 ------~~~~~~~~~~~~~--~~s~~-~q~~a~~~l~~--~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~--~~g~~i~ 299 (352)
T PRK03321 233 ------EVIAALRKVAVPF--SVNSL-AQAAAIASLAA--EDELLERVDAVVAERDRVRAALRAAGWTVPP--SQANFVW 299 (352)
T ss_pred ------HHHHHHHHhcCCC--CCCHH-HHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCccCC--CCCCEEE
Confidence 6777766543222 12222 22222223332 1334555666777788899999988887654 2345689
Q ss_pred EEeC
Q 014724 409 VDLR 412 (419)
Q Consensus 409 vd~~ 412 (419)
+++.
T Consensus 300 i~l~ 303 (352)
T PRK03321 300 LPLG 303 (352)
T ss_pred EeCC
Confidence 8874
No 178
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.80 E-value=2.3e-18 Score=173.55 Aligned_cols=212 Identities=22% Similarity=0.215 Sum_probs=148.6
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccc
Q 014724 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (419)
Q Consensus 142 g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g 221 (419)
|++..+++| +++++++|.+. .+.++||+.|+.+++. +++|||+|+++++.|++...... ..+...|
T Consensus 45 ~~p~~~~le----~~la~l~g~~~-----~l~~~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~----~~~~~~G 110 (378)
T TIGR01329 45 GNPTRTALE----SLLAKLDKADR-----AFAFSSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLT----QVVPRSG 110 (378)
T ss_pred CChHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHH----HHHHHcC
Confidence 445556666 67888999854 3778899988887665 78999999999888876532100 0012234
Q ss_pred cccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcC
Q 014724 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (419)
Q Consensus 222 ~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~ 299 (419)
. ++..++. .|++++++.++ .++|+|++++|+||+ ..|+++|+++|+++|+++++|++|..+.. .
T Consensus 111 ~--~v~~vd~------~d~~~le~~i~-~~tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~~~~~-----~ 176 (378)
T TIGR01329 111 V--VVVHVDT------TDLDKVKAALG-PKTKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMMSPLL-----C 176 (378)
T ss_pred c--EEEEeCC------CCHHHHHHhcC-cCceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence 4 4444332 38999999987 489999999999884 57999999999999999999999866543 2
Q ss_pred CCCC-CCcEEEeCCCCcCCCCC---eeEEEEeCCCcchhhHHHHhhhccc-CCCCCCChHHHHHHHHHHHHHhcChHHHH
Q 014724 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVF-PGLQGGPHNHTIGGLAVCLKHAQSPEFKV 374 (419)
Q Consensus 300 ~~~~-~~Div~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~-~~~~g~p~~~~iaala~al~~~~~~~~~~ 374 (419)
.+++ ++|++++|+||++.||. +|+++++++ ++.+++..... .+...+| ..+ ...+..+ ..+..
T Consensus 177 ~~l~~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~-----~~~~~~~~~~~~~G~~~~~----~~a-~l~~~~l--~tl~~ 244 (378)
T TIGR01329 177 NPLELGADIVYHSATKFLAGHSDVMAGVLAVKGE-----EIAKKVYFLQNSTGSGLAP----FDC-WLLLRGI--KTLAI 244 (378)
T ss_pred ChhhcCCcEEEEecceeccCCccceeEEEEeCcH-----HHHHHHHHHHHhcCCcCCH----HHH-HHHHccC--CCHHH
Confidence 3455 89999999999998864 798888764 55555544322 1211111 111 1123332 24677
Q ss_pred HHHHHHHHHHHHHHHHHhC
Q 014724 375 YQNKVVSNCRALASRLVEL 393 (419)
Q Consensus 375 ~~~~v~~n~~~l~~~L~~~ 393 (419)
+.++..+|+..++++|+++
T Consensus 245 R~e~~~~na~~la~~L~~~ 263 (378)
T TIGR01329 245 RIEKQQENARAIAMFLSTH 263 (378)
T ss_pred HHHHHHHHHHHHHHHHHhC
Confidence 8899999999999999875
No 179
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.80 E-value=1.9e-18 Score=173.04 Aligned_cols=211 Identities=17% Similarity=0.222 Sum_probs=147.2
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccc
Q 014724 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (419)
Q Consensus 142 g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g 221 (419)
+++..++|| ++++++.|.+. + +.++||+.|+.+++ .+++|||+|+++.+.+++.... + ......+
T Consensus 52 ~~p~~~~le----~~lA~leg~~~----~-v~~~sG~aAi~~~l-~~l~~GD~VI~~~~~yg~~~~~-~----~~~~~~~ 116 (364)
T PRK07269 52 KNPTRAKLE----ETLAAIESADY----A-LATSSGMSAIVLAF-SVFPVGSKVVAVRDLYGGSFRW-F----NQQEKEG 116 (364)
T ss_pred CCccHHHHH----HHHHHHhCCCe----E-EEeCCHHHHHHHHH-HHhCCCCEEEEecCCcCchHHH-H----HHHHhcC
Confidence 345567777 56778888765 2 67788999999888 4679999999998877654311 0 0000000
Q ss_pred cccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcC
Q 014724 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (419)
Q Consensus 222 ~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~ 299 (419)
.+. + ++..|++++++.+++ ++|+|++++|+||+ ..|+++|+++|+++|+++++|++++.++. .
T Consensus 117 -~~~-----~---~~~~d~~~l~~~i~~-~TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD~t~~~~~~-----~ 181 (364)
T PRK07269 117 -RFH-----F---TYANTEEELIAAIEE-DTDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVDNTFYSPIY-----Q 181 (364)
T ss_pred -cEE-----E---EecCCHHHHHHhcCc-CceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence 011 1 234689999999874 79999999999985 47999999999999999999999765532 3
Q ss_pred CCCC-CCcEEEeCCCCcCCCCC---eeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHH
Q 014724 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 375 (419)
Q Consensus 300 ~~~~-~~Div~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~ 375 (419)
.|++ ++|++++|+||++.|+. ||+|+++++ ++.+++..... ..|.. .+-+.| ..++..+. .++.+
T Consensus 182 ~pl~~gaDivv~S~tK~l~g~~d~~gG~v~~~~~-----~l~~~~~~~~~--~~G~~-~s~~~a-~l~~~~L~--tL~~r 250 (364)
T PRK07269 182 RPIELGADIVLHSATKYLSGHNDVLAGVVVTNDL-----ELYEKLFYNLN--TTGAV-LSPFDS-YLLMRGLK--TLSLR 250 (364)
T ss_pred CchhhCCcEEEecCceeccCCCcccceEEEeCcH-----HHHHHHHHHHH--HhCCC-CCHHHH-HHHHcCCC--cHHHH
Confidence 4565 89999999999998754 699888764 56666543221 11111 111211 22344443 36788
Q ss_pred HHHHHHHHHHHHHHHHhC
Q 014724 376 QNKVVSNCRALASRLVEL 393 (419)
Q Consensus 376 ~~~v~~n~~~l~~~L~~~ 393 (419)
.+++.+|+.+++++|++.
T Consensus 251 ~~~~~~na~~~a~~L~~~ 268 (364)
T PRK07269 251 MERSTANAQEVVAFLKKS 268 (364)
T ss_pred HHHHHHHHHHHHHHHHhC
Confidence 899999999999999986
No 180
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.79 E-value=2e-18 Score=172.66 Aligned_cols=260 Identities=14% Similarity=0.122 Sum_probs=166.1
Q ss_pred ccccccCCCChHHHHHHHhhhhhccCCCCCCCC-CCCCc---hhHHHHHHHHHHHHHHHHcCCCCCCCceeEec-CChHH
Q 014724 105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGK-RYYGG---NEYIDELETLCQKRALAAFNLDENKWGVNVQP-LSGSP 179 (419)
Q Consensus 105 i~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~-r~~~g---~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~-~sGt~ 179 (419)
++|+|++..+|+.|++|+..++.+ |. +++. .+..+ .++.+.++ .+++.++++||.+.+ +.+ +++ +|||.
T Consensus 1 ~~~~pGp~~~p~~V~~a~~~~~~~-~~--~~~rg~~~~~~r~~~~~~~~~-~~r~~l~~l~~~~~~-~~v-vf~~gs~T~ 74 (355)
T cd00611 1 INFSAGPAALPEEVLEQAQKELLD-FN--GLGMSVMEMSHRSKDFEAIVN-EAESDLRELLNIPDN-YKV-LFLQGGATG 74 (355)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHhh-cc--cCCccccccCCCCHHHHHHHH-HHHHHHHHHhCCCCC-ceE-EEEcCCchH
Confidence 578999999999999999998754 31 2221 11112 35555565 689999999998432 223 333 44889
Q ss_pred HHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCC-CCC-HHHHHHHhhhcCCeEEEE
Q 014724 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG-LVD-YDMLEKTAILFRPKLIIA 257 (419)
Q Consensus 180 A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~-~iD-~d~Le~~l~~~~pklIi~ 257 (419)
|+++++.++++++++...... +.+.+.+. +.....|..++.++. ++ ++ ..+ .+..+..+. .++|+|.+
T Consensus 75 a~~~~~~~l~~~~~~~~~i~~---g~~~~~~~---~~a~~~g~~~~~~~~--~~-~g~~~~~~~~~~~~~~-~~~~lV~~ 144 (355)
T cd00611 75 QFAAVPLNLLGDKGTADYVVT---GAWSAKAA---KEAKRYGGVVVIVAA--KE-EGKYTKIPDVETWDLA-PDAAYVHY 144 (355)
T ss_pred HHHHHHHhcCCCCCeEEEEEC---CHHHHHHH---HHHHhcCCCcEEEec--cc-ccCCCCCCCHhhcCCC-CCCCEEEE
Confidence 999999999874444332211 11212110 011234555555553 32 22 224 222223333 47899887
Q ss_pred cCCCCCCcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCCCCcEEEeCCCCcCCCCCe-eEEEEeCCCcchhhH
Q 014724 258 GASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVEL 336 (419)
Q Consensus 258 ~~s~~p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~~~Div~~S~hK~l~Gprg-G~i~~~~~~~~~~~l 336 (419)
.+..|.+-..+. ++++.||+++++|++|++|.. +..++..|++++|.||+| ||.| |+++.+++ +
T Consensus 145 ~h~~t~tG~~~~---~i~~~~g~~~~VDa~qs~g~~-----~idv~~~~~~~ss~~K~l-GP~G~g~l~~~~~------~ 209 (355)
T cd00611 145 CSNETIHGVEFD---EVPDTGGVPLVADMSSNILSR-----PIDVSKFGVIYAGAQKNL-GPAGVTVVIVRKD------L 209 (355)
T ss_pred eCCcccccEEcc---eecccCCCeEEEEccccccCC-----CCCHHHhCEEEeeccccc-CCCceEEEEECHH------H
Confidence 776665433233 456669999999999988753 222334567777799976 7998 88888873 3
Q ss_pred HHHhhhc-----------ccCCCCCCChHHHHHHHHHHHHHhcCh-HHHHHHHHHHHHHHHHHHHHHhC-Cc
Q 014724 337 ESAINNA-----------VFPGLQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVEL-GY 395 (419)
Q Consensus 337 ~~~i~~~-----------~~~~~~g~p~~~~iaala~al~~~~~~-~~~~~~~~v~~n~~~l~~~L~~~-G~ 395 (419)
.+++... ......++|+.+.+.++..|++.+... +++.+.++..++++++.++|+++ |+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl 281 (355)
T cd00611 210 LGKARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGF 281 (355)
T ss_pred HhhcccCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 3222110 001124688899999999999998866 68999999999999999999998 86
No 181
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.79 E-value=5.1e-18 Score=170.82 Aligned_cols=213 Identities=13% Similarity=0.068 Sum_probs=150.8
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccc
Q 014724 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (419)
Q Consensus 142 g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g 221 (419)
||+..+.|| ++++++-|.+. .+.+.||+.|+.+++.+++++||+|++.+..|++...... ..+...|
T Consensus 60 ~nPt~~~le----~~la~LEg~~~-----a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~----~~l~~~G 126 (395)
T PRK08114 60 GTLTHFSLQ----EAMCELEGGAG-----CALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCS----KILSKLG 126 (395)
T ss_pred CChhHHHHH----HHHHHHhCCCe-----EEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHH----HHHHhcC
Confidence 677778888 56777777765 2778899999999999999999999998877766532110 0112234
Q ss_pred cccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCChHHHHHHHHHhC--CEEEEeccccccccccCC
Q 014724 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVG--ALLMMDMAHISGLVAASV 297 (419)
Q Consensus 222 ~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~dl~~I~~ia~~~g--a~livD~ah~~Gl~~~g~ 297 (419)
+ ++..++ ..|.+++++.+++ ++|+|++.++.||+ ..|+++|+++||++| +++++|.++..++.
T Consensus 127 i--~v~~vd------~~d~~~l~~~l~~-~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~---- 193 (395)
T PRK08114 127 V--TTTWFD------PLIGADIAKLIQP-NTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMIDNTWAAGVL---- 193 (395)
T ss_pred c--EEEEEC------CCCHHHHHHhcCC-CceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEEECCCccccc----
Confidence 4 444432 2478999999875 78999999999985 579999999999984 99999999877654
Q ss_pred cCCCCC-CCcEEEeCCCCcCCCCC---eeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHH
Q 014724 298 VADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK 373 (419)
Q Consensus 298 ~~~~~~-~~Div~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~ 373 (419)
..|++ ++|++++|.||++.|+. +|+++.++ ++.+.+..... ..|. ..+-..+. ..++-+. .+.
T Consensus 194 -~~pl~~GaDivv~S~tKyl~Ghsdv~~G~v~~~~------~~~~~l~~~~~--~~G~-~~~p~~a~-l~~rgl~--TL~ 260 (395)
T PRK08114 194 -FKALDFGIDISIQAGTKYLVGHSDAMIGTAVANA------RCWEQLRENSY--LMGQ-MVDADTAY-MTSRGLR--TLG 260 (395)
T ss_pred -cCHHHcCCcEEEEcCcccccCCCcceeEEEEcCH------HHHHHHHHHHH--hccC-CCCHHHHH-HHHcCCC--cHH
Confidence 34555 89999999999999984 57776655 44444442211 1121 11112222 1233332 356
Q ss_pred HHHHHHHHHHHHHHHHHHhC
Q 014724 374 VYQNKVVSNCRALASRLVEL 393 (419)
Q Consensus 374 ~~~~~v~~n~~~l~~~L~~~ 393 (419)
-+.+|+.+|+..++++|+++
T Consensus 261 lR~~~~~~na~~va~~L~~h 280 (395)
T PRK08114 261 VRLRQHEESSLKVAEWLAEH 280 (395)
T ss_pred HHHHHHHHHHHHHHHHHHcC
Confidence 77899999999999999986
No 182
>PRK06460 hypothetical protein; Provisional
Probab=99.79 E-value=4.7e-18 Score=171.18 Aligned_cols=212 Identities=17% Similarity=0.156 Sum_probs=144.2
Q ss_pred hhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCcccccccccccccc
Q 014724 143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 222 (419)
Q Consensus 143 ~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~ 222 (419)
++...++| +.+++++|.+. .+.+++|+.|+..++.++++|||+|+++++.+++.+.... ..+...|+
T Consensus 44 ~p~~~~L~----~~lA~l~g~~~-----~v~~~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~----~~~~~~G~ 110 (376)
T PRK06460 44 NPTVLELT----KKIVELENAEM-----GVAFSSGMGAISTTALALLKPGNSVLVHRDMFGRSYRFFT----DYLKNWGV 110 (376)
T ss_pred CccHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHH----HHHHhhCc
Confidence 34445665 67888999876 3677899999999999999999999998876654332110 11234454
Q ss_pred ccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcCC
Q 014724 223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD 300 (419)
Q Consensus 223 ~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~ 300 (419)
. +..++.+ |.+.+++.++ .++|+|++++|+||+ ..|+++|.++|+++|+++++|++|..+.. ..
T Consensus 111 ~--v~~~~~~------~~~~l~~~~~-~~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivDea~~~~~~-----~~ 176 (376)
T PRK06460 111 N--VDASNPG------SDNIIEKAKS-KRYDVVFVENITNPLLRVVDITELSKVCKENGSILIVDATFSTPIN-----QK 176 (376)
T ss_pred E--EEEECCC------CHHHHHHhcC-CCceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcCcccc-----CC
Confidence 3 3333322 2344555443 478999999999984 68999999999999999999999754421 12
Q ss_pred CCC-CCcEEEeCCCCcCCCCC---eeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHH
Q 014724 301 PFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQ 376 (419)
Q Consensus 301 ~~~-~~Div~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~ 376 (419)
++. ++|+++.|+||+|.|++ +|+++.++ ++.+++.....+... +... ..+. .+++.. +.++.+.
T Consensus 177 ~l~~~~divv~S~sK~l~G~~~~~~G~~~~~~------~l~~~l~~~~~~~g~-~~~~--~~a~-~~l~~~--~~l~~r~ 244 (376)
T PRK06460 177 PLELGADIVVHSASKFLAGHNDVIAGLAAGYG------KLLNVIDQMRRTLGT-SLDP--HAAY-LTLRGI--KTLKIRM 244 (376)
T ss_pred hhhcCCCEEEeecceeccCCCCceEEEEecCH------HHHHHHHHHHHhcCC-CCCH--HHHH-HHHhch--hhHHHHH
Confidence 333 68999999999998765 79988876 666666543322211 1111 2221 122221 3457778
Q ss_pred HHHHHHHHHHHHHHHhC
Q 014724 377 NKVVSNCRALASRLVEL 393 (419)
Q Consensus 377 ~~v~~n~~~l~~~L~~~ 393 (419)
+++.+|++++++.|+++
T Consensus 245 ~~~~~n~~~l~~~L~~~ 261 (376)
T PRK06460 245 DVINRNAEQIAEFLEGH 261 (376)
T ss_pred HHHHHHHHHHHHHHHcC
Confidence 89999999999999986
No 183
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.79 E-value=1.5e-17 Score=182.36 Aligned_cols=268 Identities=16% Similarity=0.102 Sum_probs=174.7
Q ss_pred CCCChH-HHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCC-hHHHHHHHHHHc
Q 014724 111 ENFTSR-AVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLS-GSPANFEVYTAI 188 (419)
Q Consensus 111 en~~~~-~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~s-Gt~A~~~~~~al 188 (419)
.+++++ .|.+++...+.+.+ ++|++.+..+....+.++ .+|+++++++|++++++ .|++++ +|+|++.+..++
T Consensus 43 tt~~~~~~V~~~~~~~~~~~~--~np~s~~~~s~~~~~~~e-~aR~~ia~~lga~~~~~--~VvFtsnaT~alnlva~~l 117 (805)
T PLN02724 43 ATLYSESQLEAALADFSSNVY--GNPHSQSDSSMRSSDTIE-SARQQVLEYFNAPPSDY--ACVFTSGATAALKLVGETF 117 (805)
T ss_pred CCCCCHHHHHHHHHHHHhhcc--CCCCcCcchhhhHHHHHH-HHHHHHHHHhCCCccce--EEEEeCChHHHHHHHHHHC
Confidence 445454 55555555544333 455543444444445565 68999999999977532 355665 578999998888
Q ss_pred -cCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCC-----CCCCCCH--HHHHHHhh---------hcC
Q 014724 189 -LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-----STGLVDY--DMLEKTAI---------LFR 251 (419)
Q Consensus 189 -l~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~-----~~~~iD~--d~Le~~l~---------~~~ 251 (419)
+++||+|++...+|.+.+. +. ......|..++.++++.+. +.+.+|. ++|++.++ ..+
T Consensus 118 ~~~~gd~Iv~t~~eH~svl~-~~----~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~ 192 (805)
T PLN02724 118 PWSSESHFCYTLENHNSVLG-IR----EYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEA 192 (805)
T ss_pred CCCCCCeEEEeeccccchHH-HH----HHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhccccccCCC
Confidence 7899999998888877653 21 1112345544444432111 1234444 66776532 124
Q ss_pred CeEEEEcCCC--CCCcCChHHHHHHHHHh--------CCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcCCCC
Q 014724 252 PKLIIAGASA--YPRDFDYPRMRQIADAV--------GALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGP 319 (419)
Q Consensus 252 pklIi~~~s~--~p~~~dl~~I~~ia~~~--------ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l~Gp 319 (419)
+++|++.+-+ ++...|++.|.++++.. ++++++|++|+.|.. +..+. ++|++++|+||+|+||
T Consensus 193 t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~~-----piDv~~~~~Dfl~~S~HK~~GgP 267 (805)
T PLN02724 193 YNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGTS-----PPDLSRYPADFVVVSFYKIFGYP 267 (805)
T ss_pred cceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCCC-----CCChhhcCCCEEEEecceeccCC
Confidence 5788876543 45788999876655532 368999999988854 22233 7999999999998889
Q ss_pred Ce-eEEEEeCCCcchhhHHHHhhhcccC-----------------------CCCCCChHHHHHHHHHHHHHhcChHHHHH
Q 014724 320 RG-GMIFFKKDPVLGVELESAINNAVFP-----------------------GLQGGPHNHTIGGLAVCLKHAQSPEFKVY 375 (419)
Q Consensus 320 rg-G~i~~~~~~~~~~~l~~~i~~~~~~-----------------------~~~g~p~~~~iaala~al~~~~~~~~~~~ 375 (419)
.| |+++.+++ +.+.+....+. .-.|+++...++++..|++.+..-++++.
T Consensus 268 ~G~G~L~vr~~------~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~l~~ig~~~I 341 (805)
T PLN02724 268 TGLGALLVRRD------AAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFKLLNRLTISAI 341 (805)
T ss_pred CCceEEEEehh------hhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHHHHHHhChHHH
Confidence 97 99998873 33332211110 12467788888888888888765467888
Q ss_pred HHHHHHHHHHHHHHHHhC-------CcEEec
Q 014724 376 QNKVVSNCRALASRLVEL-------GYKLVS 399 (419)
Q Consensus 376 ~~~v~~n~~~l~~~L~~~-------G~~v~~ 399 (419)
.++..+.++++.+.|.++ ++.++.
T Consensus 342 ~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg 372 (805)
T PLN02724 342 AMHTWALTHYVANSLRNLKHGNGAPVCVLYG 372 (805)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCCeEEEEcC
Confidence 888999999999999876 366664
No 184
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.79 E-value=2.6e-17 Score=168.47 Aligned_cols=278 Identities=20% Similarity=0.228 Sum_probs=186.6
Q ss_pred ccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHc
Q 014724 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI 188 (419)
Q Consensus 109 ~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~al 188 (419)
..+..+++.+.+++...+...- +.++. + +...++|+.+..+++++++.+...+ .+++++||+||+.++.+.
T Consensus 69 ~~~~~~~~~a~~~~~~~~~~nl--~d~~~--~---p~a~~~E~~~v~~l~~l~~~~~~~~--G~~t~GgTean~lal~aa 139 (460)
T COG0076 69 FCPTRVPPVAAELLVSALNKNL--GDPDE--S---PAAAELEERVVNMLSDLLGAPEEAS--GTFTSGGTEANLLALLAA 139 (460)
T ss_pred cCCCCCHHHHHHHHHHHHhhcC--CCccc--C---hhHHHHHHHHHHHHHHHhCCCCCCc--eEEEcChHHHHHHHHHHH
Confidence 4455677888888887775422 33331 2 1245899999999999999975433 466778899999877655
Q ss_pred cCC--------CC------EEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCe-
Q 014724 189 LKP--------HD------RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPK- 253 (419)
Q Consensus 189 l~p--------GD------~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pk- 253 (419)
.+. +. +|+++.-. |++.. |.+.+.|.+.+.++.. +.+..+|++++++++.+.+..
T Consensus 140 r~~~~~~~~~~~~~~~~~P~ii~s~~a---H~s~~-----Kaa~~lG~~~~~v~~~--~~~~~id~~~l~~~i~~~t~~g 209 (460)
T COG0076 140 RERWRKRALAESGKPGGKPNIVCSETA---HFSFE-----KAARYLGLGLRRVPTV--PTDYRIDVDALEEAIDENTIGG 209 (460)
T ss_pred HHHHHHHhhhcccccCCCCeEEecCcc---hhHHH-----HHHHHhCCCceeEEec--cCccccCHHHHHHHHHhhccCc
Confidence 211 11 57766544 44322 4567788877777743 336899999999999876555
Q ss_pred -EE-EEcCCCCCCcCChHHHHHHHHHhCCEEEEeccccccccc--cCC-cC--CCCCCCcEEEeCCCCcCCCCCe-eEEE
Q 014724 254 -LI-IAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVA--ASV-VA--DPFKYCDVVTTTTHKSLRGPRG-GMIF 325 (419)
Q Consensus 254 -lI-i~~~s~~p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~--~g~-~~--~~~~~~Div~~S~hK~l~Gprg-G~i~ 325 (419)
+| +++++.++...|+++|++||++++++++||+|. -|.+. ... .. .-++++|.++.++||++..|.+ |+++
T Consensus 210 ~vV~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~-GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g~aP~~~G~il 288 (460)
T COG0076 210 VVVGTAGTTDTGSIDDIEELADIAEEYGIWLHVDAAF-GGFLLPFLEPDGRWDFGLEGVDSITVDGHKYGLAPIGCGVVL 288 (460)
T ss_pred eEEEEecCCCCCccCCHHHHHHHHHHcCCcEEEEccc-cceeecccCccchhhcCCCCceEEEECcccccCCCCCceEEE
Confidence 33 345566677889999999999999999999994 34332 111 11 1123799999999999877765 9999
Q ss_pred EeCCCcchhhHHHHhhhc--ccCC-------CCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCC-c
Q 014724 326 FKKDPVLGVELESAINNA--VFPG-------LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG-Y 395 (419)
Q Consensus 326 ~~~~~~~~~~l~~~i~~~--~~~~-------~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G-~ 395 (419)
.+++. ++.+.+... ..++ ..++......++....++.+..+++++..++..+++++|++.|++.| |
T Consensus 289 ~rd~e----~l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~ 364 (460)
T COG0076 289 FRDEE----ALRRILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDF 364 (460)
T ss_pred EECHH----HhhhhhhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 98851 233322211 1111 01122222344445567777678889999999999999999999987 8
Q ss_pred EEecCCCcceeEEEEe
Q 014724 396 KLVSGGSDNHLVLVDL 411 (419)
Q Consensus 396 ~v~~~~t~~hlv~vd~ 411 (419)
+++..+ ...+|.+.+
T Consensus 365 e~~~~p-~l~~V~fr~ 379 (460)
T COG0076 365 ELVNEP-ELPIVAFRL 379 (460)
T ss_pred EeecCC-ccceEEEEc
Confidence 988633 455666665
No 185
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.79 E-value=4.6e-18 Score=171.46 Aligned_cols=255 Identities=14% Similarity=0.054 Sum_probs=171.4
Q ss_pred hcccccccCCCChHH-HHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEec-CChHHH
Q 014724 103 KSLELIASENFTSRA-VMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQP-LSGSPA 180 (419)
Q Consensus 103 ~~i~L~~sen~~~~~-V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~-~sGt~A 180 (419)
..+.|++++..+++. |++|+...+... . ..+.++.+.++ .+++.++++||++.+ +.+ +++ +|||.+
T Consensus 12 ~~~~f~~Gp~~~~~~~v~~a~~~~~~~~-----~----hr~~~f~~~~~-~~r~~l~~l~~~~~~-~~v-~~~~gs~T~~ 79 (378)
T PRK03080 12 ADPRFSSGPCKKRPGWQLEALADALLGR-----S----HRQKPVKALLK-RVIEGTRELLSLPEG-YEV-GIVPGSDTGA 79 (378)
T ss_pred CCCCcCCCCcCCChHHHHHHHHhhhccc-----C----cCCHHHHHHHH-HHHHHHHHHhCCCCC-ceE-EEECCchHHH
Confidence 356788999888888 999998654311 1 11335655565 688999999998542 223 334 478999
Q ss_pred HHHHHHHccCC-CCEEEEeCCCCCccccCcccccccccccccc-ccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEc
Q 014724 181 NFEVYTAILKP-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG 258 (419)
Q Consensus 181 ~~~~~~all~p-GD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~-~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~ 258 (419)
+++++.+++++ ++.|+. +-.|+..+... ..+..|. .++.++. + .+..+|+++++. +|+|.+.
T Consensus 80 ~~~~~~~l~~~~~~~vi~-~g~f~~~~~~~------~~~~~g~~~v~~~~~--~-~g~~~d~~~i~~------~~~V~~~ 143 (378)
T PRK03080 80 WEMALWSLLGARRVDHLA-WESFGSKWATD------VVKQLKLEDPRVLEA--D-YGSLPDLSAVDF------DRDVVFT 143 (378)
T ss_pred HHHHHHhcCCCCcceEEE-eCHHHHHHHHH------HHhhcCCCCceEecc--C-CCCCCCHhhcCC------CCCEEEE
Confidence 99999999885 445544 33444432100 0123354 4455543 3 345788776432 4555554
Q ss_pred C--CCCCCcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCCCCcEEEeCCCCcCCCCCe-eEEEEeCCCcchhh
Q 014724 259 A--SAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVE 335 (419)
Q Consensus 259 ~--s~~p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~~~Div~~S~hK~l~Gprg-G~i~~~~~~~~~~~ 335 (419)
+ +.++...|+++|++ +++|+++++|++|+.|.. +..++.+|++++|.||+|.||.| |+++.+++
T Consensus 144 h~~t~tG~~~pi~~I~~--~~~g~~~vVDa~qs~G~~-----pidv~~iD~~~~s~~K~l~~P~G~g~l~v~~~------ 210 (378)
T PRK03080 144 WNGTTTGVRVPVARWIG--ADREGLTICDATSAAFAL-----PLDWSKLDVYTFSWQKVLGGEGGHGMAILSPR------ 210 (378)
T ss_pred ecCCccceeccchhhcc--ccCCCeEEEecccccccC-----CCCHHHCcEEEEehhhhCCCCCceEEEEECHH------
Confidence 4 34567889999999 889999999999988754 22333689999999999999987 99888873
Q ss_pred HHHHhhhc---------------------cc-CCCCCCChHHHHHHHHHHHHHhcCh-HHHHHHHHHHHHHHHHHHHHHh
Q 014724 336 LESAINNA---------------------VF-PGLQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVE 392 (419)
Q Consensus 336 l~~~i~~~---------------------~~-~~~~g~p~~~~iaala~al~~~~~~-~~~~~~~~v~~n~~~l~~~L~~ 392 (419)
..+++... .+ .++.++|....+.++..+++.+.+. ++++..+++.+++++++++|++
T Consensus 211 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~ 290 (378)
T PRK03080 211 AVERLESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAEK 290 (378)
T ss_pred HHHhhhcccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHh
Confidence 33332210 01 1223456666677778889888765 6788899999999999999999
Q ss_pred CC-cEEe
Q 014724 393 LG-YKLV 398 (419)
Q Consensus 393 ~G-~~v~ 398 (419)
.| ++++
T Consensus 291 ~~~~~~~ 297 (378)
T PRK03080 291 TPWATPL 297 (378)
T ss_pred CCCcccc
Confidence 86 5665
No 186
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.79 E-value=3.1e-17 Score=170.74 Aligned_cols=253 Identities=19% Similarity=0.197 Sum_probs=168.8
Q ss_pred hHHHHHHHHHHHHHHHHcCCC------------CCCCceeEecCChHHHHHHHHHHc----cC-----------------
Q 014724 144 EYIDELETLCQKRALAAFNLD------------ENKWGVNVQPLSGSPANFEVYTAI----LK----------------- 190 (419)
Q Consensus 144 ~~~~~lE~~~~~~la~~~g~~------------~~~~~v~V~~~sGt~A~~~~~~al----l~----------------- 190 (419)
+...++|+.+.+|++++++.. ...+| +++++||.||..++.+- +.
T Consensus 125 pa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G--~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~ 202 (522)
T TIGR03799 125 KAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLG--AFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAAL 202 (522)
T ss_pred cchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCe--EEcCchHHHHHHHHHHHHHHhccccccccccccccchhhh
Confidence 345689999999999998521 11233 56678899998876543 11
Q ss_pred -----CCCEEEEeCCCCCccccCcccccccccccccccc-EEEecccCCCCCCCCHHHHHHHhhh---cCCeE--EE--E
Q 014724 191 -----PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYF-ESMPYRLDESTGLVDYDMLEKTAIL---FRPKL--II--A 257 (419)
Q Consensus 191 -----pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~-~~v~~~~~~~~~~iD~d~Le~~l~~---~~pkl--Ii--~ 257 (419)
+++.|++.+.+|.+.. +.+...|.+. +++.+++| +++.+|+++|++.+++ .+.+. |+ .
T Consensus 203 ~~~~~~~~~v~~S~~~H~S~~--------kaa~~lglg~~~v~~vp~d-~~g~~d~~~L~~~i~~~~~~g~~~~~vvata 273 (522)
T TIGR03799 203 KHYGYDGLAILVSERGHYSLG--------KAADVLGIGRDNLIAIKTD-ANNRIDVDALRDKCAELAEQNIKPLAIVGVA 273 (522)
T ss_pred hhccCCceEEEECCCchHHHH--------HHHHHcCCCcccEEEEEeC-CCCcCCHHHHHHHHHHHHHCCCCcEEEEEEe
Confidence 2346777766665542 2334445421 33444555 4789999999999863 23333 33 2
Q ss_pred cCCCCCCcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCC---CCCcEEEeCCCCcCCCCCe-eEEEEeCCCcch
Q 014724 258 GASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLG 333 (419)
Q Consensus 258 ~~s~~p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~---~~~Div~~S~hK~l~Gprg-G~i~~~~~~~~~ 333 (419)
+++..+...|+++|+++|+++|+++++|+||+.+......+...+ +++|.++.+.||++.+|.| |+++++++
T Consensus 274 Gtt~tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~P~g~G~llvr~~---- 349 (522)
T TIGR03799 274 GTTETGNIDPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVPMGAGMVLFKDP---- 349 (522)
T ss_pred cCcCCCCcCCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCcCcccEEEEEeCH----
Confidence 344566788999999999999999999999764433222111112 3689999999999999987 99888874
Q ss_pred hhHHHHhhh---cc---------cCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEEecC
Q 014724 334 VELESAINN---AV---------FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSG 400 (419)
Q Consensus 334 ~~l~~~i~~---~~---------~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~~~ 400 (419)
++.+.+.. +. ...++++.....+ .+..+++.+...+++++.++..+++++|.+.|++. +|+++..
T Consensus 350 -~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~al-~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~~~~el~~~ 427 (522)
T TIGR03799 350 -ALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMAM-LVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQPDFELVTE 427 (522)
T ss_pred -HHHHHhccCcchhcCCCCCccccceeecCcchHHH-HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEecC
Confidence 33333221 00 0123445444332 45667888777788999999999999999999885 9999863
Q ss_pred CCcceeEEEEeCCc
Q 014724 401 GSDNHLVLVDLRPM 414 (419)
Q Consensus 401 ~t~~hlv~vd~~~~ 414 (419)
...++|.+.+.|.
T Consensus 428 -p~l~iv~Fr~~p~ 440 (522)
T TIGR03799 428 -PELCLLTYRYVPE 440 (522)
T ss_pred -CCccEEEEEEeCh
Confidence 4567777776554
No 187
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.79 E-value=6e-18 Score=170.65 Aligned_cols=211 Identities=15% Similarity=0.109 Sum_probs=146.0
Q ss_pred hhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCcccccccccccccc
Q 014724 143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 222 (419)
Q Consensus 143 ~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~ 222 (419)
++....|| +.++++.+.+. + +++.||+.|+..++.++++|||+|+++++.|++..... . ..+...|.
T Consensus 60 npt~~~Le----~~iA~le~~~~----~-~~~~sG~~Ai~~~l~all~~GD~Vvv~~~~Y~~t~~l~--~--~~l~~~Gi 126 (394)
T PRK09028 60 TPTHFAFQ----AAIVELEGGAG----T-ALYPSGAAAISNALLSFLKAGDHLLMVDSCYEPTRDLC--D--KILKGFGI 126 (394)
T ss_pred CchHHHHH----HHHHHHhCCCc----E-EEECCHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHH--H--Hhhhhcce
Confidence 34445666 55667766653 3 67788999999999999999999999999886653210 0 01122343
Q ss_pred ccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcCC
Q 014724 223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD 300 (419)
Q Consensus 223 ~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~ 300 (419)
++..++. -|.+.+++.+.+ ++|+|++++|+||+ ..|+++|+++|+++|+++++|++|..++. ..
T Consensus 127 --~v~~v~~------~~~e~l~~~l~~-~TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD~t~a~p~~-----~~ 192 (394)
T PRK09028 127 --ETTYYDP------MIGEGIRELIRP-NTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNTWASPIN-----SR 192 (394)
T ss_pred --EEEEECC------CCHHHHHHhcCc-CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCcccccc-----CC
Confidence 3333321 256788888864 79999999999995 57999999999999999999999876542 35
Q ss_pred CCC-CCcEEEeCCCCcCCCCC---eeEEEEeCCCcchhhHHHHhhhcc-cCCCCCCChHHHHHHHHHHHHHhcChHHHHH
Q 014724 301 PFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAV-FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 375 (419)
Q Consensus 301 ~~~-~~Div~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~-~~~~~g~p~~~~iaala~al~~~~~~~~~~~ 375 (419)
|++ ++|+++.|.||++.|+. +|+++.++ ++.+++.... ..+...+| ..+. ..++-+. .+.-+
T Consensus 193 Pl~~GaDivv~S~tK~l~Gh~d~~~G~~~~~~------~~~~~l~~~~~~~G~~~~p----~~a~-l~~rgl~--TL~lR 259 (394)
T PRK09028 193 PFEMGVDISIQAATKYIVGHSDVMLGTATANE------KHWDQLREHSYLMGQCTSP----DDVY-LAMRGLR--TLGVR 259 (394)
T ss_pred ccccCceEEEEeCCeEecCCCCEEEEEEECCH------HHHHHHHHHHHhcCCCCCH----HHHH-HHHcccC--cHHHH
Confidence 666 89999999999998884 57766554 4545444221 11221122 2222 1233332 36778
Q ss_pred HHHHHHHHHHHHHHHHhC
Q 014724 376 QNKVVSNCRALASRLVEL 393 (419)
Q Consensus 376 ~~~v~~n~~~l~~~L~~~ 393 (419)
.+++.+|+..++++|+++
T Consensus 260 ~~~~~~na~~la~~L~~~ 277 (394)
T PRK09028 260 LAQHEKNALKVANWLATR 277 (394)
T ss_pred HHHHHHHHHHHHHHHhcC
Confidence 899999999999999986
No 188
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.79 E-value=3e-17 Score=170.37 Aligned_cols=270 Identities=17% Similarity=0.155 Sum_probs=168.5
Q ss_pred CCChHHHHHHHhhhhh-ccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHH---H-
Q 014724 112 NFTSRAVMEAVGSCLT-NKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVY---T- 186 (419)
Q Consensus 112 n~~~~~V~eal~~~l~-~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~---~- 186 (419)
+.++|.+.+++.+... ..|. .|.......| ..++...+++++++++|++. +.+..++|+.+....+ .
T Consensus 80 ~~~~p~i~~~~~~~~~~~~~t-pYq~e~~sqG---~lel~~~~~~~la~l~G~~~----~~l~~~~GA~a~~~~l~~~r~ 151 (481)
T PRK04366 80 MKYNPKINEKVARLPGFAELH-PLQPEETVQG---ALELMYELQEWLKEITGMDA----VTLQPAAGAHGELTGLLMIRA 151 (481)
T ss_pred CCCCHHHHHHHHhCcchhcCC-CCCChhhhhH---HHHHHHHHHHHHHHHhCCCc----eEEEeCcHHHHHHHHHHHHHH
Confidence 4578999999877521 1121 2211101122 23555678899999999975 4577778876554322 2
Q ss_pred HccCCCC----EEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC
Q 014724 187 AILKPHD----RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 262 (419)
Q Consensus 187 all~pGD----~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~ 262 (419)
.++++|| +|+++++.|+.+.. .+...|. +++.++++ +++.+|+++|++.+.+ ++++|++++|+.
T Consensus 152 ~~~~~Gd~~~~~Vlv~~~~hp~~~~--------~~~~~G~--~vv~v~~~-~~~~~D~e~L~~~i~~-~t~~V~v~~Pn~ 219 (481)
T PRK04366 152 YHEARGDTKRTEVIVPDSAHGTNPA--------SAAMAGF--KVVEIPSN-EDGLVDLEALKAAVGE-DTAALMLTNPNT 219 (481)
T ss_pred HhhccCcCCCCEEEEcCCccHhHHH--------HHHHcCC--EEEEeecC-CCCCcCHHHHHhhccc-CCeEEEEeCCCC
Confidence 3467887 99999998877652 2334565 44444454 4688999999999864 788888887773
Q ss_pred -CCc-CChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC-CCcEEEeCCCCcCCCC------CeeEEEEeCCCcch
Q 014724 263 -PRD-FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLRGP------RGGMIFFKKDPVLG 333 (419)
Q Consensus 263 -p~~-~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~-~~Div~~S~hK~l~Gp------rgG~i~~~~~~~~~ 333 (419)
+.. .|+++|+++|+++|+++++|++|..++.. .. .+-+ ++|++++++||+|.+| .+|+++++++
T Consensus 220 tG~~~~dl~eI~~~a~~~gal~iVD~a~~~~~~g--~~-~~~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~---- 292 (481)
T PRK04366 220 LGLFERNILEIAEIVHEAGGLLYYDGANLNAILG--KA-RPGDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEE---- 292 (481)
T ss_pred ccccchHHHHHHHHHHHcCCEEEEEecChhhhcc--cC-CccccCCCEEEEechhhcCCCCCCCCCCeeeeeehhh----
Confidence 233 47999999999999999999999766432 11 2223 8999999999998654 3468887763
Q ss_pred hhHHHHhhhc-------cc-CCCC----------CCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCc
Q 014724 334 VELESAINNA-------VF-PGLQ----------GGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGY 395 (419)
Q Consensus 334 ~~l~~~i~~~-------~~-~~~~----------g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~ 395 (419)
+.+++... .+ ...+ ++++...+.+....+..+..+++++..+++.+++++|++.|.+. +
T Consensus 293 --~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~-~ 369 (481)
T PRK04366 293 --LAPFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDI-Y 369 (481)
T ss_pred --hHhhCCCCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhh-C
Confidence 33332100 00 0000 01111111111222344444456777888899999999999987 5
Q ss_pred EEecCCCcceeEEEEe
Q 014724 396 KLVSGGSDNHLVLVDL 411 (419)
Q Consensus 396 ~v~~~~t~~hlv~vd~ 411 (419)
++..++...|.++++.
T Consensus 370 ~~~~~~~~~~~~~~~~ 385 (481)
T PRK04366 370 DLPYDRPCMHEFVLSG 385 (481)
T ss_pred cccCCCCeeEEEEEEC
Confidence 5443333346666664
No 189
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.79 E-value=8e-18 Score=166.95 Aligned_cols=226 Identities=19% Similarity=0.147 Sum_probs=156.2
Q ss_pred HHHHHHHHHHHHHHHHcCCC-CCCCceeEecCChHHHHHHHHHHccC------------CC--CEEEEeCCCCCccccCc
Q 014724 145 YIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGSPANFEVYTAILK------------PH--DRIMGLDLPHGGHLSHG 209 (419)
Q Consensus 145 ~~~~lE~~~~~~la~~~g~~-~~~~~v~V~~~sGt~A~~~~~~all~------------pG--D~Vl~~~~~~~g~~s~~ 209 (419)
...++|+.+++++++++|.+ .+.+ .+++++||+||+.++.++.. ++ +.|+++++.|.++..
T Consensus 35 ~~~~le~~~~~~~~~~~g~~~~~~~--~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~-- 110 (345)
T cd06450 35 AATEMEAEVVNWLAKLFGLPSEDAD--GVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEK-- 110 (345)
T ss_pred hhHHHHHHHHHHHHHHhCCCCCCCC--EEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHHH--
Confidence 35689999999999999997 2222 35667788999998888742 33 367777777765421
Q ss_pred cccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhc-----CCeEEEEcCCCCC--CcCChHHHHHHHHHhCCEE
Q 014724 210 FMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-----RPKLIIAGASAYP--RDFDYPRMRQIADAVGALL 282 (419)
Q Consensus 210 ~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~-----~pklIi~~~s~~p--~~~dl~~I~~ia~~~ga~l 282 (419)
.+...|. +++.++.++ ++.+|+++|++.+.+. ++++|++..++++ ...|+++|+++|+++|+++
T Consensus 111 ------~~~~~g~--~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l 181 (345)
T cd06450 111 ------AAAYLDV--KVRLVPVDE-DGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLWL 181 (345)
T ss_pred ------HHHHHhc--CeEEeeeCC-CCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCCeE
Confidence 2233454 444444553 4689999999998652 5778877766655 5679999999999999999
Q ss_pred EEeccccccccccCCcC---CCCCCCcEEEeCCCCcCCCCCe-eEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHH
Q 014724 283 MMDMAHISGLVAASVVA---DPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIG 358 (419)
Q Consensus 283 ivD~ah~~Gl~~~g~~~---~~~~~~Div~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~ia 358 (419)
++|++|..+........ ..++++|++++|+||++.+|.+ |+++.+ +.
T Consensus 182 ~vD~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~g~g~~~~~-----------------------------~~ 232 (345)
T cd06450 182 HVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPLGCSAVLVR-----------------------------AL 232 (345)
T ss_pred EEechhhHHHhhChhhHHHhcCccccCEEEEchhHhhCCCcchHHHHHH-----------------------------HH
Confidence 99999876653211100 1123689999999999877644 554211 22
Q ss_pred HHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEEecCCCcceeEEEEeCC
Q 014724 359 GLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 359 ala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~~~~t~~hlv~vd~~~ 413 (419)
++..+++.+...++++..++..++++++.+.|.+. |++++. ..+.+++.+.+.+
T Consensus 233 ~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~iv~f~~~~ 287 (345)
T cd06450 233 KLWATLRRFGRDGYGEHIDRIVDLAKYLAELIRADPGFELLG-EPNLSLVCFRLKP 287 (345)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec-CCceeEEEEEECC
Confidence 23334544444567888899999999999999886 787764 3466788877654
No 190
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.79 E-value=7e-18 Score=170.82 Aligned_cols=215 Identities=19% Similarity=0.132 Sum_probs=150.6
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccc
Q 014724 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (419)
Q Consensus 142 g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g 221 (419)
+++.+.++| +++++++|.+. + +.+.||+.|+.+++.++++|||+|+++++.|++...... ......|
T Consensus 63 ~~pt~~~Le----~~lA~l~g~~~----~-l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~----~~~~~~G 129 (394)
T PRK07050 63 ATPTSLALA----QRLAEIEGGRH----A-LLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGE----WLARDFG 129 (394)
T ss_pred CCHHHHHHH----HHHHHHhCCCe----E-EEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHH----HHHHhcC
Confidence 556667777 57888888764 2 666788999999999999999999999998876542110 0112334
Q ss_pred cccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcC
Q 014724 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (419)
Q Consensus 222 ~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~ 299 (419)
+ ++..++. -|.+++++.+++ ++|+|++++|+||+ ..|+++|+++|+++|++|++|++|..|...
T Consensus 130 i--~v~~vd~------~~~~~l~~~i~~-~tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD~a~a~~~~~----- 195 (394)
T PRK07050 130 I--TVRFYDP------LIGAGIADLIQP-NTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAIDNTYSAGLAF----- 195 (394)
T ss_pred e--EEEEECC------CCHHHHHHhcCC-CCeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEECCccccccc-----
Confidence 4 4444432 145788888864 79999999999884 568999999999999999999998776542
Q ss_pred CCCC-CCcEEEeCCCCcCCCC---CeeEEEEeCCCcchhhHHHHhhhcccC-CCCCCChHHHHHHHHHHHHHhcChHHHH
Q 014724 300 DPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDPVLGVELESAINNAVFP-GLQGGPHNHTIGGLAVCLKHAQSPEFKV 374 (419)
Q Consensus 300 ~~~~-~~Div~~S~hK~l~Gp---rgG~i~~~~~~~~~~~l~~~i~~~~~~-~~~g~p~~~~iaala~al~~~~~~~~~~ 374 (419)
.+++ ++|+++.|++|++.|. .||+++++++ ++.+++...... +...+| ..+ ..+++.+ +.+..
T Consensus 196 ~~l~~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~-----~~~~~~~~~~~~~G~~~~~----~~a-~l~lr~l--~tl~~ 263 (394)
T PRK07050 196 KPFEHGVDISVQALTKYQSGGSDVLMGATITADA-----ELHAKLKLARMRLGIGVSA----DDC-SLVLRGL--PSLQV 263 (394)
T ss_pred CHHHcCCeEEEEECCceecCCCCeeEEEEEECCH-----HHHHHHHHHHHhcCCCCCH----HHH-HHHHcCC--CcHHH
Confidence 3444 7899999999998653 4788888764 676666543221 211111 222 1233322 24566
Q ss_pred HHHHHHHHHHHHHHHHHhC-Cc
Q 014724 375 YQNKVVSNCRALASRLVEL-GY 395 (419)
Q Consensus 375 ~~~~v~~n~~~l~~~L~~~-G~ 395 (419)
+.+++.+|+..++++|+++ ++
T Consensus 264 Rl~~~~~~a~~la~~L~~~p~v 285 (394)
T PRK07050 264 RLAAHDRSALEVAEWLKARPEI 285 (394)
T ss_pred HHHHHHHHHHHHHHHHHhCCCc
Confidence 7888999999999999986 44
No 191
>PLN02509 cystathionine beta-lyase
Probab=99.79 E-value=1.2e-17 Score=171.57 Aligned_cols=215 Identities=21% Similarity=0.212 Sum_probs=146.4
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccc
Q 014724 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (419)
Q Consensus 142 g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g 221 (419)
|++..+.+| +++++++|.+. .+.++||+.|+.+++ .+++|||+|+++++.|+++..... ..+...|
T Consensus 131 gnpt~~aLE----~~lA~leg~e~-----ai~~~SG~aAi~~il-~ll~~GD~VI~~~~~y~~t~~ll~----~~l~~~G 196 (464)
T PLN02509 131 GNPTRDALE----SLLAKLDKADR-----AFCFTSGMAALSAVT-HLIKNGEEIVAGDDVYGGSDRLLS----QVVPRSG 196 (464)
T ss_pred CCHHHHHHH----HHHHHHhCCCE-----EEEeCcHHHHHHHHH-HHhCCCCEEEEcCCchhhHHHHHH----HHHHHCC
Confidence 667667776 56778887654 367788988875544 679999999999988876531100 0112334
Q ss_pred cccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcC
Q 014724 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (419)
Q Consensus 222 ~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~ 299 (419)
+ ++..++ ..|++++++.+.+ ++|+|++++|+||+ ..|+++|+++|+++|+++++|++|..+.. .
T Consensus 197 ~--~v~~vd------~~d~e~l~~ai~~-~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~a~~~~-----~ 262 (464)
T PLN02509 197 V--VVKRVN------TTNLDEVAAAIGP-QTKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSIMSPVL-----S 262 (464)
T ss_pred e--EEEEeC------CCCHHHHHHhCCc-CCeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCcccccc-----C
Confidence 4 444432 2478999998864 78999999999884 57999999999999999999999877654 2
Q ss_pred CCCC-CCcEEEeCCCCcCCCCC---eeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHH
Q 014724 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 375 (419)
Q Consensus 300 ~~~~-~~Div~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~ 375 (419)
.+++ ++|++++|++|++.|+. ||+++.+++ .+.+.+...... .|+......++ .++..+. .+..+
T Consensus 263 ~pl~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~-----~l~~~~~~~~~~--~g~~l~p~~A~--l~lr~L~--tL~~R 331 (464)
T PLN02509 263 RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE-----KLAKEVYFLQNS--EGSGLAPFDCW--LCLRGIK--TMALR 331 (464)
T ss_pred ChhhcCCcEEEecCcccccCCCccceeEEEeccH-----HHHHHHHHHHHh--cCCCcCHHHHH--HHHhhhh--hHHHH
Confidence 3444 89999999999998864 688887764 444433221111 11111111111 2333332 35678
Q ss_pred HHHHHHHHHHHHHHHHhC-Cc
Q 014724 376 QNKVVSNCRALASRLVEL-GY 395 (419)
Q Consensus 376 ~~~v~~n~~~l~~~L~~~-G~ 395 (419)
.++..+|++++++.|+++ .+
T Consensus 332 ~~r~~~nA~~la~~L~~~p~V 352 (464)
T PLN02509 332 IEKQQENARKIAMYLSSHPRV 352 (464)
T ss_pred HHHHHHHHHHHHHHHhcCCCc
Confidence 899999999999999886 44
No 192
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.78 E-value=1.6e-17 Score=167.51 Aligned_cols=213 Identities=22% Similarity=0.254 Sum_probs=147.7
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccc-ccc
Q 014724 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRV-SGT 220 (419)
Q Consensus 142 g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i-~~~ 220 (419)
+++..+++| +.+++++|.+. + +.+.+|++|+.+++.++++|||+|+++++.|++.+... ..+ ...
T Consensus 49 ~~p~~~~le----~~lA~l~g~~~----v-~~~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~-----~~~~~~~ 114 (382)
T TIGR02080 49 GNPTRDLLQ----QALAELEGGAG----A-VVTNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLL-----NALAKKG 114 (382)
T ss_pred CCchHHHHH----HHHHHHhCCCc----E-EEEcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHH-----HHHHhhc
Confidence 345456666 56788888533 2 56667789999999999999999999999887653211 011 111
Q ss_pred ccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCc
Q 014724 221 SIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV 298 (419)
Q Consensus 221 g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~ 298 (419)
+ +++..+ + ..|++++++.+++ ++|+|++++|+||+ ..|+++|.++|+++|+++++|++|..+..
T Consensus 115 ~--~~v~~~--d----~~d~~~l~~ai~~-~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~----- 180 (382)
T TIGR02080 115 C--FRVLFV--D----QGDEQALRAALAQ-KPKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVVDNTFLSPAL----- 180 (382)
T ss_pred C--eEEEEE--C----CCCHHHHHHhcCc-CceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCccccc-----
Confidence 2 222221 1 2489999999874 79999999999985 57999999999999999999999865542
Q ss_pred CCCCC-CCcEEEeCCCCcCCCC---CeeEEEEeCCCcchhhHHHHhhhcc-cCCCCCCChHHHHHHHHHHHHHhcChHHH
Q 014724 299 ADPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDPVLGVELESAINNAV-FPGLQGGPHNHTIGGLAVCLKHAQSPEFK 373 (419)
Q Consensus 299 ~~~~~-~~Div~~S~hK~l~Gp---rgG~i~~~~~~~~~~~l~~~i~~~~-~~~~~g~p~~~~iaala~al~~~~~~~~~ 373 (419)
..++. ++|++++|+||++.|+ ++|+++++++ ++.+++.... ..+...+| +.+ ..+++.+. .+.
T Consensus 181 ~~pl~~gaDivv~S~sK~l~G~~~~~~G~i~~~~~-----~~~~~l~~~~~~~g~~~sp----~~a-~l~lr~l~--tl~ 248 (382)
T TIGR02080 181 QNPLALGADLVLHSCTKYLNGHSDVIAGAVIAKDP-----QVAEELAWWANNLGVTGGA----FDS-YLTLRGLR--TLV 248 (382)
T ss_pred CCchhhCCCEEEeecceeccCCCCceeEEEEeCCH-----HHHHHHHHHHHccCCCCCH----HHH-HHHHcccc--hHH
Confidence 23444 7899999999999765 4798888664 5666654322 11222222 212 12344332 355
Q ss_pred HHHHHHHHHHHHHHHHHHhCC
Q 014724 374 VYQNKVVSNCRALASRLVELG 394 (419)
Q Consensus 374 ~~~~~v~~n~~~l~~~L~~~G 394 (419)
.+.+++.+|+..++++|++..
T Consensus 249 ~R~~~~~~na~~~a~~L~~~p 269 (382)
T TIGR02080 249 ARMRLQQRNAQAIVEYLQTQP 269 (382)
T ss_pred HHHHHHHHHHHHHHHHHHhCC
Confidence 668889999999999999863
No 193
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.78 E-value=8.4e-18 Score=174.49 Aligned_cols=204 Identities=16% Similarity=0.152 Sum_probs=133.1
Q ss_pred hcccccccC-CC-ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHH-HHHHHcCCC--CCCCceeEecCCh
Q 014724 103 KSLELIASE-NF-TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQK-RALAAFNLD--ENKWGVNVQPLSG 177 (419)
Q Consensus 103 ~~i~L~~se-n~-~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~-~la~~~g~~--~~~~~v~V~~~sG 177 (419)
+.|+|..++ ++ +++.|.++....... .||.. .|.. ++.+.+.+ .+.+.++.. +.+ ..+|++++|
T Consensus 101 ~~i~l~~g~p~~~~~~~v~e~~~~~~~~----~Y~~~---~g~~---~lreaia~~~~~~~~~~~~~~~~-~~~I~vT~G 169 (527)
T PRK09275 101 DAVSYVRDQLGFDADEFVYELVDGIIGD----NYPVP---DRML---KHTEKIVKDYLRQEMCGGRPPKG-EFDLFAVEG 169 (527)
T ss_pred HHHhhcCCCCCCCCCHHHHHHHHHHhcC----CCCCC---CCCH---HHHHHHHHHHHHhhccCCCCCCC-cCeEEEeCC
Confidence 447777776 44 567777754433322 24431 1222 33334444 444433322 210 025666766
Q ss_pred -HHHHHHHHHH-----ccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCC-CCCCCCHHHHHHHhhhc
Q 014724 178 -SPANFEVYTA-----ILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILF 250 (419)
Q Consensus 178 -t~A~~~~~~a-----ll~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~-~~~~iD~d~Le~~l~~~ 250 (419)
++|+..++.+ +++|||+|++++|.+..+.. .+.+.|.+++.++++.++ +++.+|.+++++++. .
T Consensus 170 a~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~--------~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~-~ 240 (527)
T PRK09275 170 GTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLE--------IPELPRYDLEVVHINADEENEWQYPDSELEKLRD-P 240 (527)
T ss_pred HHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHH--------HHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcC-C
Confidence 5788888876 68999999999998876642 123455556777776654 357899999999876 4
Q ss_pred CCeEEEEcCCCCCC--cC---ChHHHHHHHHH--hCCEEEEeccccccccccCCcCCCCC---CCcEEEeCCCCcC--CC
Q 014724 251 RPKLIIAGASAYPR--DF---DYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPFK---YCDVVTTTTHKSL--RG 318 (419)
Q Consensus 251 ~pklIi~~~s~~p~--~~---dl~~I~~ia~~--~ga~livD~ah~~Gl~~~g~~~~~~~---~~Div~~S~hK~l--~G 318 (419)
++|+|++++|+||+ .. .+++|+++|++ +|++||+|+++ ..+.. ...+.+. ..-|++.|+||+| +|
T Consensus 241 ~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY-~~f~~--~~~s~~~~~~~~~I~v~SfSK~f~mtG 317 (527)
T PRK09275 241 SIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVY-GTFVD--DFRSLFAVLPYNTILVYSFSKYFGATG 317 (527)
T ss_pred CCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCC-hhhcc--cccCHHHhCCCCEEEEeehhhhccCcH
Confidence 89999999999995 33 47788889965 49999999995 34432 1122121 2348899999987 89
Q ss_pred CCeeEEEEeCC
Q 014724 319 PRGGMIFFKKD 329 (419)
Q Consensus 319 prgG~i~~~~~ 329 (419)
+|.||++++++
T Consensus 318 ~RlG~i~~~~~ 328 (527)
T PRK09275 318 WRLGVIALHED 328 (527)
T ss_pred hHHhhhhcCch
Confidence 99999999874
No 194
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.78 E-value=9.2e-18 Score=167.82 Aligned_cols=263 Identities=16% Similarity=0.126 Sum_probs=168.5
Q ss_pred hcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEec-CChH-
Q 014724 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQP-LSGS- 178 (419)
Q Consensus 103 ~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~-~sGt- 178 (419)
+.|+|..++|+ ++|.+++++...+.. + .+|+.. . ..+++ +.+++++|++++ ++++ ++|+
T Consensus 35 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~-~-~~y~~~------~-~~~lr----~~ia~~~~~~~~----~i~~~~~Ga~ 97 (361)
T PRK00950 35 SIIKLGSNENPLGPSPKAVEAIEKELSK-I-HRYPEP------D-APELR----EALSKYTGVPVE----NIIVGGDGMD 97 (361)
T ss_pred ceEEccCCCCCCCCCHHHHHHHHHHHHh-h-cCCCCC------C-HHHHH----HHHHHHhCCCHH----HEEEeCCCHH
Confidence 55888888764 568889888776542 2 234431 1 12344 567788898774 3555 6775
Q ss_pred HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEc
Q 014724 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG 258 (419)
Q Consensus 179 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~ 258 (419)
+++..++.++++|||+|++++|.+..+.. .+...|. +++.++.+ +++.+|++++++.+.. ++++|+++
T Consensus 98 ~~i~~~~~~~~~~gd~vlv~~p~y~~~~~--------~~~~~g~--~~~~~~~~-~~~~~~~~~l~~~~~~-~~~~v~~~ 165 (361)
T PRK00950 98 EVIDTLMRTFIDPGDEVIIPTPTFSYYEI--------SAKAHGA--KPVYAKRE-EDFSLDVDSVLNAITE-KTKVIFLC 165 (361)
T ss_pred HHHHHHHHHhcCCCCEEEEcCCChHHHHH--------HHHHcCC--EEEEeecC-CCCCcCHHHHHHHhcc-CCCEEEEe
Confidence 57888888889999999999987654321 1234455 44444433 3568999999998864 78999988
Q ss_pred CCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCCCC--cEEEeCCCCcC--CCCCeeEEEEeCCCcc
Q 014724 259 ASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYC--DVVTTTTHKSL--RGPRGGMIFFKKDPVL 332 (419)
Q Consensus 259 ~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~~~--Div~~S~hK~l--~GprgG~i~~~~~~~~ 332 (419)
+|+||+ ..+.+++.++|+++|+++++|++|. ++.. ......++.. -++++|++|+| +|.|.||+++++
T Consensus 166 ~p~nptG~~~~~~~l~~l~~~~~~~li~De~y~-~~~~-~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~---- 239 (361)
T PRK00950 166 TPNNPTGNLIPEEDIRKILESTDALVFVDEAYV-EFAE-YDYTPLALEYDNLIIGRTFSKVFGLAGLRIGYGFVPE---- 239 (361)
T ss_pred CCCCCCCCCcCHHHHHHHHHHCCcEEEEECchh-hhCc-cchHHHHHhcCCEEEEEeehHhhcCchhhcchhcCCH----
Confidence 899884 6789999999999999999999973 3331 1111111122 27789999987 577899999877
Q ss_pred hhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeEEEEeC
Q 014724 333 GVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 333 ~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~vd~~ 412 (419)
++.+.+.....+... + ....++...++.. .+.+++..++..++++++.+.|. +.+.+ ...+++|+++.
T Consensus 240 --~~~~~~~~~~~~~~~--~-~~~~~~a~~~l~~--~~~~~~~~~~~~~~r~~l~~~l~---~~~~~--~~~~~i~~~~~ 307 (361)
T PRK00950 240 --WLIDYYMRAKTPFSL--T-RLSQAAAIAALSD--KEYIEKSIEHGIKSREYLYNELP---FKVYP--SEANFVLVDVT 307 (361)
T ss_pred --HHHHHHHHhcCCCCC--C-HHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHhhcC---eeECC--CcceEEEEECC
Confidence 566666544332221 1 1122222223321 12235556666666666666664 55543 34578899884
No 195
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.78 E-value=7.8e-18 Score=170.36 Aligned_cols=214 Identities=20% Similarity=0.180 Sum_probs=150.1
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccc
Q 014724 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (419)
Q Consensus 142 g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g 221 (419)
+++..+++| +++++++|.+. .+.++||+.|+.+++. ++++||+|+++++.|++.+.... ..+...|
T Consensus 52 ~~p~~~~le----~~lA~l~g~~~-----~v~~~sG~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~----~~~~~~G 117 (390)
T PRK08064 52 GNPTREALE----DIIAELEGGTK-----GFAFASGMAAISTAFL-LLSKGDHVLISEDVYGGTYRMIT----EVLSRFG 117 (390)
T ss_pred CChhHHHHH----HHHHHHhCCCC-----eEEECCHHHHHHHHHH-HhCCCCEEEEccCccchHHHHHH----HHHHHcC
Confidence 345556666 67888999875 3778999999988886 78999999999998876542110 0112345
Q ss_pred cccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcC
Q 014724 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (419)
Q Consensus 222 ~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~ 299 (419)
. ++..++. .|++++++.+.+ ++|+|++++|+||+ ..|+++|.++|+++|+++++|+++..+.. .
T Consensus 118 ~--~v~~v~~------~d~~~l~~~l~~-~tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~-----~ 183 (390)
T PRK08064 118 I--EHTFVDM------TNLEEVAQNIKP-NTKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDNTFLTPLL-----Q 183 (390)
T ss_pred C--EEEEECC------CCHHHHHHhcCC-CceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEECCCCcccc-----c
Confidence 4 4444332 378999998864 78999999999884 67999999999999999999999765432 2
Q ss_pred CCCC-CCcEEEeCCCCcCCCCC---eeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHH
Q 014724 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 375 (419)
Q Consensus 300 ~~~~-~~Div~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~ 375 (419)
.+++ ++|++++|+||++.|+. +|+++.+++ ++.+++.....++ |......-+.+ ++..+ ..+..+
T Consensus 184 ~~~~~g~Divv~S~tK~~~G~~~~laG~~v~~~~-----~~~~~l~~~~~~~--g~~~~~~~a~l--~~~gl--~tl~~R 252 (390)
T PRK08064 184 KPLDLGADVVLHSATKFLAGHSDVLAGLAVVKDE-----ELAQKLYFLQNSF--GAVLGVQDCWL--VLRGL--KTLHVR 252 (390)
T ss_pred CchhhCCcEEEeecceeccCCccceeEEEEeCCH-----HHHHHHHHHHHhc--CCCCCHHHHHH--HHccc--CcHHHH
Confidence 3444 78999999999998875 488887664 5666665443322 11111111111 22222 235677
Q ss_pred HHHHHHHHHHHHHHHHhCC
Q 014724 376 QNKVVSNCRALASRLVELG 394 (419)
Q Consensus 376 ~~~v~~n~~~l~~~L~~~G 394 (419)
.++..+|+..+++.|++++
T Consensus 253 ~~~~~~~a~~la~~L~~~~ 271 (390)
T PRK08064 253 LEHSSETANKIALYLQEHP 271 (390)
T ss_pred HHHHHHHHHHHHHHHhcCC
Confidence 8889999999999999864
No 196
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.78 E-value=1.3e-17 Score=170.55 Aligned_cols=161 Identities=19% Similarity=0.183 Sum_probs=120.7
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccc
Q 014724 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (419)
Q Consensus 142 g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g 221 (419)
+++..+.+| +.+++++|.+. .|.++||+.|+.+++.+++++||+|++++..|+++..... ..+...|
T Consensus 67 ~~pt~~~le----~~la~l~g~~~-----~v~fsSG~~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~----~~l~~~G 133 (437)
T PRK05613 67 TNPTVEALE----NRIASLEGGVH-----AVAFASGQAAETAAILNLAGAGDHIVTSPRLYGGTETLFL----VTLNRLG 133 (437)
T ss_pred cChHHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHHHhcCCCCEEEECCCccHHHHHHHH----HHHHhcC
Confidence 456566666 67888899864 4889999999999999999999999999888887632110 1122334
Q ss_pred cccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CcCChHHHHHHHHHhCCEEEEeccccccccccCCcC
Q 014724 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (419)
Q Consensus 222 ~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p--~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~ 299 (419)
+ ++..++ ++ .|++++++.+++ ++|+|++..+.|| ...|+++|+++|+++|+++++|++|..|.. .
T Consensus 134 i--~v~~vd-~~----~d~e~l~~~l~~-~tk~V~~e~~~Np~~~v~di~~I~~la~~~gi~livD~t~a~g~~-----~ 200 (437)
T PRK05613 134 I--EVTFVE-NP----DDPESWQAAVQP-NTKAFFGETFANPQADVLDIPAVAEVAHRNQVPLIVDNTIATAAL-----V 200 (437)
T ss_pred e--EEEEEC-CC----CCHHHHHHhCCc-cCeEEEEECCCCCCCcccCHHHHHHHHHHcCCeEEEECCCccccc-----c
Confidence 4 444443 22 289999999875 7898888777776 468999999999999999999999876643 2
Q ss_pred CCCC-CCcEEEeCCCCcCCCCC---eeEEEEeC
Q 014724 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKK 328 (419)
Q Consensus 300 ~~~~-~~Div~~S~hK~l~Gpr---gG~i~~~~ 328 (419)
.+++ ++|++++|+||++.|+. ||+++.++
T Consensus 201 ~p~~~GaDivv~S~~K~l~G~gd~~gG~vv~~~ 233 (437)
T PRK05613 201 RPLELGADVVVASLTKFYTGNGSGLGGVLIDGG 233 (437)
T ss_pred ChHHhCCCEEEeeccceecCCCcceeEEEEecC
Confidence 3445 89999999999887653 57777543
No 197
>PLN02397 aspartate transaminase
Probab=99.78 E-value=1.2e-17 Score=170.78 Aligned_cols=252 Identities=19% Similarity=0.200 Sum_probs=148.5
Q ss_pred HHHHHHHHHHHHHHcCCCC-CCCc--eeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccc
Q 014724 147 DELETLCQKRALAAFNLDE-NKWG--VNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY 223 (419)
Q Consensus 147 ~~lE~~~~~~la~~~g~~~-~~~~--v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~ 223 (419)
.++.+.+.+++.+..+... +++- +++..++|+.++...+.+++.|||+|++++|.|..+.. .+...|.
T Consensus 94 ~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~--------~~~~~g~- 164 (423)
T PLN02397 94 AEFNKLSAKLAYGADSPAIKENRVATVQCLSGTGSLRLGAEFLARFYPGSTIYIPNPTWGNHHN--------IFRDAGV- 164 (423)
T ss_pred HHHHHHHHHHHcCCCCchhhcCeeEeeecccchHHHHHHHHHHHHhCCCCEEEEeCCCchhHHH--------HHHHcCC-
Confidence 3666666666644332211 1110 11233344445666666777899999999998877642 2345565
Q ss_pred cEEEeccc-CCCCCCCCHHHHHHHhhh--cCCeEEEEcCCCCCCc-----CChHHHHHHHHHhCCEEEEecccccccccc
Q 014724 224 FESMPYRL-DESTGLVDYDMLEKTAIL--FRPKLIIAGASAYPRD-----FDYPRMRQIADAVGALLMMDMAHISGLVAA 295 (419)
Q Consensus 224 ~~~v~~~~-~~~~~~iD~d~Le~~l~~--~~pklIi~~~s~~p~~-----~dl~~I~~ia~~~ga~livD~ah~~Gl~~~ 295 (419)
+.++++. +++++.+|++.+++.+++ .+++++++++|+||+- ..+++|.++|++||++||+|++ |.++.+.
T Consensus 165 -~~~~v~l~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~-Y~~l~~~ 242 (423)
T PLN02397 165 -PVRTYRYYDPKTRGLDFDGLLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSA-YQGFASG 242 (423)
T ss_pred -eEEEeecccCcCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecc-cCCccCC
Confidence 4455544 223578999999888763 3567888899999962 3467889999999999999999 5677654
Q ss_pred CC---cCC--CCC--CC-cEEEeCCCCcC--CCCCeeEEE--EeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHH
Q 014724 296 SV---VAD--PFK--YC-DVVTTTTHKSL--RGPRGGMIF--FKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVC 363 (419)
Q Consensus 296 g~---~~~--~~~--~~-Div~~S~hK~l--~GprgG~i~--~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~a 363 (419)
+. ..+ .+. +. -|+++|+||+| +|+|.||++ ...... ...+.+.+.........+.+ .....+.+.+
T Consensus 243 ~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~RvG~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~q~~~~~~ 320 (423)
T PLN02397 243 DLDADAQSVRMFVEDGHEILVAQSYAKNMGLYGERVGALSVVCKSADV-AVRVKSQLKLIARPMYSNPP-IHGASIVATI 320 (423)
T ss_pred chhhhhHHHHHHHhcCCcEEEEEECcccCCCccccceEEEEEeCCHHH-HHHHHHHHHHHHhcccCCCc-HHHHHHHHHH
Confidence 31 111 111 21 27799999997 699999985 322100 00122233222211111222 2222222223
Q ss_pred HHHh--c---ChHHHHHHHHHHHHHHHHHHHHHhCC----cEEecCCCcceeEEEEeC
Q 014724 364 LKHA--Q---SPEFKVYQNKVVSNCRALASRLVELG----YKLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 364 l~~~--~---~~~~~~~~~~v~~n~~~l~~~L~~~G----~~v~~~~t~~hlv~vd~~ 412 (419)
|..- . .+.++...+++.++++.+.+.|++.| |++.. .....++|++++
T Consensus 321 L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~~~~~~~~~~-p~gg~fl~~~l~ 377 (423)
T PLN02397 321 LGDPELFSEWTKELKGMADRIISMRQKLYDALEARGSPGDWSHIT-KQIGMFSFTGLN 377 (423)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccc-CCceEEEecCCC
Confidence 3210 0 01135566788899999999999987 66543 245577888774
No 198
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.78 E-value=1.4e-17 Score=167.78 Aligned_cols=215 Identities=19% Similarity=0.165 Sum_probs=148.1
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccc
Q 014724 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (419)
Q Consensus 142 g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g 221 (419)
+++...+|| +.+++++|.+. .+.++||+.|+.+++ ++++|||+|+++++.|++.+.... ..+...|
T Consensus 48 ~~p~~~~Le----~~lA~l~g~~~-----~~~~~sG~aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~----~~~~~~G 113 (377)
T PRK07671 48 GNPTRAALE----ELIAVLEGGHA-----GFAFGSGMAAITAVM-MLFSSGDHVILTDDVYGGTYRVMT----KVLNRFG 113 (377)
T ss_pred CChHHHHHH----HHHHHHhCCCc-----eEEeCCHHHHHHHHH-HHhCCCCEEEECCCccchHHHHHH----HHHhcCC
Confidence 445566776 67888899876 277899998887655 678999999999998875432100 0112234
Q ss_pred cccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcC
Q 014724 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (419)
Q Consensus 222 ~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~ 299 (419)
. ++..++ ..|++++++++++ ++|+|++++|+||+ ..|+++|.++|+++|+++++|+++..+.. .
T Consensus 114 ~--~v~~v~------~~d~~~l~~ai~~-~tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD~a~~~~~~-----~ 179 (377)
T PRK07671 114 I--EHTFVD------TSNLEEVEEAIRP-NTKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVDNTFMTPYW-----Q 179 (377)
T ss_pred e--EEEEEC------CCCHHHHHHhcCC-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCCcccc-----C
Confidence 3 444432 2489999999874 78999999999984 67999999999999999999999754322 2
Q ss_pred CCCC-CCcEEEeCCCCcCCCCC---eeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHH
Q 014724 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 375 (419)
Q Consensus 300 ~~~~-~~Div~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~ 375 (419)
.+++ ++|++++|++|++.|+. +|+++++++ ++.+++....... .+.... ..+. .+++.+ ..+..+
T Consensus 180 ~p~~~g~Divv~S~sK~l~G~~~~~~G~~v~~~~-----~l~~~~~~~~~~~-g~~~~~--~~a~-l~~~~l--~tl~~R 248 (377)
T PRK07671 180 SPISLGADIVLHSATKYLGGHSDVVAGLVVVNSP-----ELAEDLHFVQNST-GGILGP--QDSW-LLLRGL--KTLGIR 248 (377)
T ss_pred ChhhhCCeEEEecCcccccCCccceeEEEEeCcH-----HHHHHHHHHHHhh-cCCCCH--HHHH-HHHcCc--ChHHHH
Confidence 3445 78999999999998874 588877664 5666554332211 111111 1111 123332 235667
Q ss_pred HHHHHHHHHHHHHHHHhC-Cc
Q 014724 376 QNKVVSNCRALASRLVEL-GY 395 (419)
Q Consensus 376 ~~~v~~n~~~l~~~L~~~-G~ 395 (419)
.+++.+|++.+.++|+++ ++
T Consensus 249 ~~~~~~na~~la~~L~~~~~v 269 (377)
T PRK07671 249 MEEHETNSRAIAEFLNNHPAV 269 (377)
T ss_pred HHHHHHHHHHHHHHHHcCCCe
Confidence 888999999999999985 44
No 199
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.78 E-value=2.3e-17 Score=164.95 Aligned_cols=266 Identities=15% Similarity=0.106 Sum_probs=166.6
Q ss_pred hhcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChH-
Q 014724 102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS- 178 (419)
Q Consensus 102 ~~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt- 178 (419)
.+.|+|..+++. +++.+++++.+.+.. ..+||. .|. .++. +.++++++++++ +|++++|+
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~--~~~Y~~----~~~---~~lr----~~ia~~~~~~~~----~I~it~G~~ 92 (357)
T PRK14809 30 DDLVKLSSNENPHGPSPAAVEAIREAAER--VHSYPK----ASH---ADLT----AALADRWDVSPE----QVWLANGGD 92 (357)
T ss_pred cceeEecCCCCCCCCCHHHHHHHHHHHhh--hhcCCC----CCH---HHHH----HHHHHHhCCCcc----eEEECCCHH
Confidence 356888888764 678899998876643 224542 121 2343 556677788874 46677774
Q ss_pred HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEc
Q 014724 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG 258 (419)
Q Consensus 179 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~ 258 (419)
+|+..++.++++|||.|++++|.|..+.. .....|..+..++++.+ +++.+|.+++++... ++|+|+++
T Consensus 93 ~al~~~~~~~~~~gd~V~v~~P~y~~~~~--------~~~~~g~~~~~~~l~~~-~~~~~~~~~~~~~~~--~~k~i~l~ 161 (357)
T PRK14809 93 GALDYLARAMLDPGDTVLVPDPGFAYYGM--------SARYHHGEVREYPVSKA-DDFEQTADTVLDAYD--GERIVYLT 161 (357)
T ss_pred HHHHHHHHHhcCCCCEEEEeCCChHHHHH--------HHHHcCCeEEEEecccC-cCCCcCHHHHHHhhc--CCcEEEEe
Confidence 69999999999999999999997653321 12345554455554322 346788888877652 68999999
Q ss_pred CCCCCC--cCChHHHHHHHHHh--CCEEEEeccccccccccCCcCCCCC-C-CcEEEeCCCCcC--CCCCeeEEEEeCCC
Q 014724 259 ASAYPR--DFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFK-Y-CDVVTTTTHKSL--RGPRGGMIFFKKDP 330 (419)
Q Consensus 259 ~s~~p~--~~dl~~I~~ia~~~--ga~livD~ah~~Gl~~~g~~~~~~~-~-~Div~~S~hK~l--~GprgG~i~~~~~~ 330 (419)
+|+||+ ..+.+++.++++.. +++||+|+++ ..+...+.....++ . --++++|++|+| +|.|.||+++++
T Consensus 162 ~p~NPTG~~~s~~~~~~l~~~~~~~~~iI~De~y-~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~-- 238 (357)
T PRK14809 162 SPHNPTGSEIPLDEVEALAERTDEETLVVVDEAY-GEFAERPSAVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVPE-- 238 (357)
T ss_pred CCCCCCCcCCCHHHHHHHHHhCccCcEEEEechh-hhccCCchhHHHHhhCCCEEEEecchhHhcCcchhheeeecCH--
Confidence 999995 45666666666543 7899999995 44443221000011 2 227789999997 689999999987
Q ss_pred cchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeEEEE
Q 014724 331 VLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVD 410 (419)
Q Consensus 331 ~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~vd 410 (419)
++.+++.....+. +.+.....++ ..++.. ...+++..+.+.++++++.+.|...++ + ....++|++
T Consensus 239 ----~~~~~~~~~~~~~--~~~~~~~~~a-~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~---~--~~g~f~~~~ 304 (357)
T PRK14809 239 ----EWADAYARVNTPF--AASELACRAG-LAALDD--DEHVERTVETARWAREYIREELDAPTW---E--SAGNFVLAE 304 (357)
T ss_pred ----HHHHHHHHhCCCC--CCCHHHHHHH-HHHhCC--HHHHHHHHHHHHHHHHHHHHHhcCccC---C--CCCCEEEEE
Confidence 5767666543222 1111111222 223321 122456666677777888888865433 2 234567887
Q ss_pred eC
Q 014724 411 LR 412 (419)
Q Consensus 411 ~~ 412 (419)
+.
T Consensus 305 ~~ 306 (357)
T PRK14809 305 VG 306 (357)
T ss_pred CC
Confidence 63
No 200
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.78 E-value=2.4e-17 Score=164.85 Aligned_cols=266 Identities=14% Similarity=0.077 Sum_probs=165.2
Q ss_pred hhcccccccCC--CChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCC-CCCCceeEecCCh-
Q 014724 102 FKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSG- 177 (419)
Q Consensus 102 ~~~i~L~~sen--~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~-~~~~~v~V~~~sG- 177 (419)
...|+|..++. ++++.+.+++.+... ..+|+.. .|. .++++.+.+++.+.+|.+ .+. .+|++++|
T Consensus 21 ~~~i~l~~~~p~~~~~~~~~~~~~~~~~---~~~Y~~~---~G~---~~lr~~ia~~~~~~~~~~~~~~--~~I~it~G~ 89 (357)
T TIGR03539 21 DGIVDLSVGTPVDPVPPLIRAALAAAAD---APGYPQT---WGT---PELREAIVDWLERRRGVPGLDP--TAVLPVIGT 89 (357)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHh---hCCCCcc---cCC---HHHHHHHHHHHHHhcCCCCCCc--CeEEEccCh
Confidence 44578877653 357888888766432 1234431 222 256666677777776654 321 24677777
Q ss_pred HHHHHHHHHHc-cCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEE
Q 014724 178 SPANFEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLII 256 (419)
Q Consensus 178 t~A~~~~~~al-l~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi 256 (419)
++|+..++.++ ++|||.|++++|.|.++.. .+...|. +.+.++ |++.+ ...++++|+
T Consensus 90 ~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~--------~~~~~g~--~~~~v~--------~~~~l----~~~~~~~v~ 147 (357)
T TIGR03539 90 KELVAWLPTLLGLGPGDTVVIPELAYPTYEV--------GALLAGA--TPVAAD--------DPTEL----DPVGPDLIW 147 (357)
T ss_pred HHHHHHHHHHHcCCCCCEEEECCCCcHHHHH--------HHHhcCC--EEeccC--------Chhhc----CccCccEEE
Confidence 56888888887 7999999999998866531 1233454 444432 22322 224789999
Q ss_pred EcCCCCCCc--C---ChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--------CCcEEEeCCCCcC--CCCCe
Q 014724 257 AGASAYPRD--F---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--------YCDVVTTTTHKSL--RGPRG 321 (419)
Q Consensus 257 ~~~s~~p~~--~---dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--------~~Div~~S~hK~l--~Gprg 321 (419)
+++|+||+- . ++++|.++|++||+++|+|++| ..+.+.+.....+. .-.++++|++|.| +|+|+
T Consensus 148 ~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~ 226 (357)
T TIGR03539 148 LNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECY-LELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRA 226 (357)
T ss_pred EeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecch-hhhccCCCCccceecccCCCccccEEEEeccccccCCCceeE
Confidence 999999852 3 4678999999999999999996 34443321111111 1138899999985 88999
Q ss_pred eEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCC
Q 014724 322 GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGG 401 (419)
Q Consensus 322 G~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~ 401 (419)
|++++++ ++.+++.........+.+.. ...++..++.. ....+...+++.++++.+.+.|++.|+++..+
T Consensus 227 G~~i~~~------~~~~~~~~~~~~~~~~~~~~-~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~~p- 296 (357)
T TIGR03539 227 GFVAGDP------ALVAELLTVRKHAGLMVPAP-VQAAMVAALGD--DGHVAEQKARYAARRAQLKPALEKAGFRIDHS- 296 (357)
T ss_pred EEEecCH------HHHHHHHHHHhhcccCCCHH-HHHHHHHHcCC--HHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCC-
Confidence 9999876 56666544322221222222 22233333322 12345566777788889999999989876543
Q ss_pred CcceeEEEEe
Q 014724 402 SDNHLVLVDL 411 (419)
Q Consensus 402 t~~hlv~vd~ 411 (419)
..+.++|+++
T Consensus 297 ~~~~~~~~~~ 306 (357)
T TIGR03539 297 EAGLYLWATR 306 (357)
T ss_pred CccEEEEEEC
Confidence 3456678775
No 201
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.78 E-value=3.3e-18 Score=170.77 Aligned_cols=231 Identities=15% Similarity=0.122 Sum_probs=152.6
Q ss_pred HHHHHHHHcCCCCCCCceeEecCChH-HHHHHHHHHccCCC-CEEEEeCCCCCccccCccccccccccccccccEEEecc
Q 014724 153 CQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR 230 (419)
Q Consensus 153 ~~~~la~~~g~~~~~~~v~V~~~sGt-~A~~~~~~all~pG-D~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~ 230 (419)
.++++++.+|++++ +|++++|+ +++..++.++++|| |+|++++|+|..+.. .+...|. +++.++
T Consensus 62 l~~~~a~~~g~~~~----~I~~~~Gs~e~i~~~~~~~~~~g~~~vli~~P~y~~y~~--------~~~~~G~--~~~~v~ 127 (351)
T PRK01688 62 VIENYAAYAGVKPE----QVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSV--------SAETIGV--EIRTVP 127 (351)
T ss_pred HHHHHHHHhCCCHH----HEEEcCCHHHHHHHHHHHhcCCCCCEEEEcCCCHHHHHH--------HHHHcCC--EEEEee
Confidence 34678888999884 57778875 69999999999997 899999998765421 2234565 444444
Q ss_pred cCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCChHHHHHHHHHh--CCEEEEeccccccccccCCcCCCCC-CC
Q 014724 231 LDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFK-YC 305 (419)
Q Consensus 231 ~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~dl~~I~~ia~~~--ga~livD~ah~~Gl~~~g~~~~~~~-~~ 305 (419)
.+ +++.+|++++++.+. ++|+|++++|+||+ ..+.+++.++++.. +.+|++|++| ..+.........+. +.
T Consensus 128 ~~-~~~~~d~~~l~~~~~--~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay-~~f~~~~s~~~~~~~~~ 203 (351)
T PRK01688 128 TL-DNWQLDLPAIADNLD--GVKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAY-IEFCPQASLAGWLAEYP 203 (351)
T ss_pred cC-CCCCCCHHHHHHhcc--CCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECch-hhcCCCCChHHHHhhCC
Confidence 54 357899999999873 78999999999985 45666666665532 6899999995 34331110000011 22
Q ss_pred c-EEEeCCCCcC--CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHH
Q 014724 306 D-VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN 382 (419)
Q Consensus 306 D-iv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n 382 (419)
. +++.|+||+| +|.|.||+++++ ++.+.+.....++.. +.. ...+...+|.....+.+++..+++.++
T Consensus 204 n~iv~rSfSK~~glaGlRiGy~i~~~------~~i~~l~~~~~~~~v--~~~-~~~~a~~~L~~~~~~~~~~~~~~~~~~ 274 (351)
T PRK01688 204 HLVILRTLSKAFALAGLRCGFTLANE------EVINLLLKVIAPYPL--STP-VADIAAQALSPQGIAAMRERVAEINAN 274 (351)
T ss_pred CEEEEecchHhhcCHHHHHhHHhCCH------HHHHHHHhccCCCCC--CHH-HHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 3 7899999987 688889999887 677777665444321 111 111212233321012345667778888
Q ss_pred HHHHHHHHHhC-CcE-EecCCCcceeEEEEeC
Q 014724 383 CRALASRLVEL-GYK-LVSGGSDNHLVLVDLR 412 (419)
Q Consensus 383 ~~~l~~~L~~~-G~~-v~~~~t~~hlv~vd~~ 412 (419)
++++.+.|+++ |++ +.+ ++.+++|+++.
T Consensus 275 r~~l~~~L~~~~~~~~~~p--s~~nfi~~~~~ 304 (351)
T PRK01688 275 RQWLIAALKEIPCVEQVFD--SETNYILARFT 304 (351)
T ss_pred HHHHHHHHHhCCCCCeECC--CCCcEEEEEcC
Confidence 99999999987 664 444 45678898874
No 202
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.78 E-value=1.7e-16 Score=156.53 Aligned_cols=247 Identities=19% Similarity=0.182 Sum_probs=160.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccE
Q 014724 146 IDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFE 225 (419)
Q Consensus 146 ~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~ 225 (419)
..++++.+++++...++...... ..++..+|+.++..++.++.++||+|+++++.|.++.. .+...+. +
T Consensus 38 ~~~l~~~l~~~l~~~~~~~~~~~-~~~~~~~~t~a~~~~~~~~~~~g~~vl~~~~~~~~~~~--------~~~~~~~--~ 106 (350)
T cd00609 38 LPELREAIAEWLGRRGGVDVPPE-EIVVTNGAQEALSLLLRALLNPGDEVLVPDPTYPGYEA--------AARLAGA--E 106 (350)
T ss_pred cHHHHHHHHHHHHHHhCCCCCcc-eEEEecCcHHHHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHCCC--E
Confidence 34677666677776665322111 22444556789999999999999999999988776532 2234454 4
Q ss_pred EEecccCCCCCCCCH--HHHHHHhhhcCCeEEEEcCCCCCC--cCCh---HHHHHHHHHhCCEEEEeccccccccccCCc
Q 014724 226 SMPYRLDESTGLVDY--DMLEKTAILFRPKLIIAGASAYPR--DFDY---PRMRQIADAVGALLMMDMAHISGLVAASVV 298 (419)
Q Consensus 226 ~v~~~~~~~~~~iD~--d~Le~~l~~~~pklIi~~~s~~p~--~~dl---~~I~~ia~~~ga~livD~ah~~Gl~~~g~~ 298 (419)
.+.++.+. ++..+. +.+++... .++++|++.+++|++ ..|+ ++|.++|+++|+++++|++|..+. ..+..
T Consensus 107 ~~~i~~~~-~~~~~~~~~~~~~~~~-~~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~-~~~~~ 183 (350)
T cd00609 107 VVPVPLDE-EGGFLLDLELLEAAKT-PKTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELV-YDGEP 183 (350)
T ss_pred EEEEeccc-ccCCccCHHHHHhhcC-ccceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhhce-eCCcc
Confidence 44444542 334443 55555544 478999888777763 4554 555689999999999999985433 22221
Q ss_pred C---CCCC--CCcEEEeCCCCcC--CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChH
Q 014724 299 A---DPFK--YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPE 371 (419)
Q Consensus 299 ~---~~~~--~~Div~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~ 371 (419)
. .... ++|++++|+||++ +|++.|+++++++ ++.+.+...... ...+++.....++..+++... .+
T Consensus 184 ~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~-----~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-~~ 256 (350)
T cd00609 184 PPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPE-----ELLERLKKLLPY-TTSGPSTLSQAAAAAALDDGE-EH 256 (350)
T ss_pred cccccCcCccCcEEEEeecccccCCcccceEEEecCHH-----HHHHHHHHHHHh-cccCCChHHHHHHHHHHhCcH-HH
Confidence 1 1111 5789999999998 4678899998874 466665543322 123444555555555555442 45
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeEEEEeCC
Q 014724 372 FKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 372 ~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~vd~~~ 413 (419)
+++..+++.++++++.+.|++.++.........+++|+.+..
T Consensus 257 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~g~~~~~~~~~ 298 (350)
T cd00609 257 LEELRERYRRRRDALLEALKELGPLVVVKPSGGFFLWLDLPE 298 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCccccCCCccEEEEEecCC
Confidence 678888899999999999999866542222456778888754
No 203
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.78 E-value=3.6e-17 Score=163.49 Aligned_cols=264 Identities=16% Similarity=0.126 Sum_probs=168.9
Q ss_pred cccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChH-HH
Q 014724 104 SLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PA 180 (419)
Q Consensus 104 ~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt-~A 180 (419)
.++|..+++. +++.+++++.+.+.. ..+||.. + ..++ ++.++++++++++ +|++++|+ ++
T Consensus 21 ~~~l~~~~~~~~~p~~~~~a~~~~~~~--~~~Y~~~----~---~~~l----r~~ia~~~~~~~~----~i~it~Ga~~~ 83 (354)
T PRK06358 21 ILDFSANINPLGVPESLKQAITENLDK--LVEYPDP----D---YLEL----RKRIASFEQLDLE----NVILGNGATEL 83 (354)
T ss_pred eEEecCCCCCCCCCHHHHHHHHHHHHh--hhcCCCc----c---HHHH----HHHHHHHhCCChh----hEEECCCHHHH
Confidence 4788777764 588999998876532 1234431 1 1233 4667778888874 47777775 68
Q ss_pred HHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCC-CCCCCHHHHHHHhhhcCCeEEEEcC
Q 014724 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAGA 259 (419)
Q Consensus 181 ~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~-~~~iD~d~Le~~l~~~~pklIi~~~ 259 (419)
+..++.++ .+ |.|++++|.++.+.. .+...|.. +++++.+++ ++.+| +++++.+.. ++++|++++
T Consensus 84 l~~~~~~~-~~-~~v~i~~P~y~~~~~--------~~~~~g~~--~~~~~~~~~~~~~~d-~~~~~~~~~-~~~~v~~~~ 149 (354)
T PRK06358 84 IFNIVKVT-KP-KKVLILAPTFAEYER--------ALKAFDAE--IEYAELTEETNFAAN-EIVLEEIKE-EIDLVFLCN 149 (354)
T ss_pred HHHHHHHh-CC-CcEEEecCChHHHHH--------HHHHcCCe--eEEEeCccccCCCcc-HHHHHhhcc-CCCEEEEeC
Confidence 88888875 44 689999998765532 12345554 444445432 45788 666666643 689998889
Q ss_pred CCCCCc--C---ChHHHHHHHHHhCCEEEEeccccccccccCCcCCCC---CC-C-cEEEeCCCCcC--CCCCeeEEEEe
Q 014724 260 SAYPRD--F---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KY-C-DVVTTTTHKSL--RGPRGGMIFFK 327 (419)
Q Consensus 260 s~~p~~--~---dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~---~~-~-Div~~S~hK~l--~GprgG~i~~~ 327 (419)
|+||+- . .+++|.++|+++|++||+|+++ ..+...+...+++ +. . -++++|++|+| +|.|.||++.+
T Consensus 150 P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y-~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~ 228 (354)
T PRK06358 150 PNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAF-MDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTS 228 (354)
T ss_pred CCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCcc-cccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecC
Confidence 999962 3 3678888999999999999994 5555443222222 11 1 27899999986 78999999885
Q ss_pred CCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChH-HHHHHHHHHHHHHHHHHHHHhC-CcEEecCCCcce
Q 014724 328 KDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPE-FKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNH 405 (419)
Q Consensus 328 ~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~-~~~~~~~v~~n~~~l~~~L~~~-G~~v~~~~t~~h 405 (419)
++ ++.+.+.....++. .+.....+...++. ..+ .++..+.+.++++.+.+.|++. |+++..+ +..
T Consensus 229 ~~-----~~~~~~~~~~~~~~---~~~~~q~~~~~~l~---~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~--~g~ 295 (354)
T PRK06358 229 NK-----NLAEKLLQMREPWS---INTFADLAGQTLLD---DKEYIKKTIQWIKEEKDFLYNGLSEFKGIKVYKP--SVN 295 (354)
T ss_pred CH-----HHHHHHHHhCCCCc---chHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCC--cce
Confidence 43 56666655432221 11111112222332 122 3666777888899999999886 7776653 334
Q ss_pred eEEEEeC
Q 014724 406 LVLVDLR 412 (419)
Q Consensus 406 lv~vd~~ 412 (419)
++|+.+.
T Consensus 296 f~~~~~~ 302 (354)
T PRK06358 296 FIFFKLE 302 (354)
T ss_pred EEEEEcC
Confidence 6888774
No 204
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.77 E-value=8.7e-17 Score=154.77 Aligned_cols=274 Identities=19% Similarity=0.110 Sum_probs=177.9
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCC-C-CceeEecCCh-HHHHHHHHHHccC
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDEN-K-WGVNVQPLSG-SPANFEVYTAILK 190 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~-~-~~v~V~~~sG-t~A~~~~~~all~ 190 (419)
+++.+.+|+...+...-..||..+ .|-. .+|+.++++++-+.+ . -...|+.++| ++|++.++.+|.+
T Consensus 79 ts~~a~~Av~~al~Sgk~N~Yaps---~G~~-------~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe~~i~~LA~ 148 (447)
T KOG0259|consen 79 TSQEAEQAVVDALRSGKGNGYAPS---VGIL-------PARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIELAISSLAN 148 (447)
T ss_pred CCHHHHHHHHHHHhcCCCCCcCCc---cccH-------HHHHHHHHHhhcCCCCccCcCceEEeccchHHHHHHHHHhcC
Confidence 688888888888766555566432 2221 134445555322211 0 0013566666 7899999999999
Q ss_pred CCCEEEEeCCCCCccccCccccccccccccccccEEEecccCC-CCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC-----
Q 014724 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKLIIAGASAYPR----- 264 (419)
Q Consensus 191 pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~-~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~----- 264 (419)
||-.||++.|.+.-+.+. ....+ +++.+|++-+ +++.||++.+|.++++ ++.+|++.+|+||.
T Consensus 149 p~aNILlPrPGfp~Y~~~--------a~~~~--lEVR~ydlLPe~~weIDL~~veal~DE-NT~AivviNP~NPcGnVys 217 (447)
T KOG0259|consen 149 PGANILLPRPGFPLYDTR--------AIYSG--LEVRYYDLLPEKDWEIDLDGVEALADE-NTVAIVVINPNNPCGNVYS 217 (447)
T ss_pred CCCceecCCCCCchHHHh--------hhhcC--ceeEeecccCcccceechHHHHHhhcc-CeeEEEEeCCCCCCccccc
Confidence 999999998865433221 12344 4666666654 4689999999999975 78888888889984
Q ss_pred cCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC----CCc-EEEeCCCCcC--CCCCeeEEEEeCCCcch--hh
Q 014724 265 DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----YCD-VVTTTTHKSL--RGPRGGMIFFKKDPVLG--VE 335 (419)
Q Consensus 265 ~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~----~~D-iv~~S~hK~l--~GprgG~i~~~~~~~~~--~~ 335 (419)
...+++|+++|+++|+.+|.|+.+ -.+++.+....|+. .+- +.++|.+|.+ +|||.|||+.++..-.+ ..
T Consensus 218 ~~HL~kiae~A~klgi~vIaDEVY-~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPGWRlGWi~~hD~~gvf~~~~ 296 (447)
T KOG0259|consen 218 EDHLKKIAETAKKLGIMVIADEVY-GHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGWRLGWIALHDPRGVFRDTK 296 (447)
T ss_pred HHHHHHHHHHHHHhCCeEEehhhc-ceeecCCCCccchhhccccCceEeecccccccccCCceeeeEEEecccccccchH
Confidence 234799999999999999999994 44555543223332 222 5689999965 99999999998852210 01
Q ss_pred HHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEEecCCCcceeEEEEe
Q 014724 336 LESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLVLVDL 411 (419)
Q Consensus 336 l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~~~~t~~hlv~vd~ 411 (419)
..+.+... .....+|..-..+|+-.-|.+.-++.|+....-+..|++..++.|++. |+.+..-....-..|+.+
T Consensus 297 ~~q~~~~~--~~~~~~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~IP~l~cp~kPeg~mylmv~l 371 (447)
T KOG0259|consen 297 VVQGIKNF--LDIIPGPATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYSRLKDIPCLTCPVKPEGCMYLMVKL 371 (447)
T ss_pred HHHHHHHH--HhccCCccHhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHHHHhcCCCcccCcCCCcceEEEecc
Confidence 11222221 122335555556666656666554456777888999999999999996 877543223333455543
No 205
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.77 E-value=5.2e-17 Score=162.63 Aligned_cols=264 Identities=14% Similarity=0.097 Sum_probs=169.6
Q ss_pred hcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChH-H
Q 014724 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 179 (419)
Q Consensus 103 ~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt-~ 179 (419)
+.|+|..++|. +++.+++++.+.+.. ..+|+.. + ..+++ +.++++++++++ +|++++|+ +
T Consensus 23 ~~i~l~~~~n~~~~~~~~~~a~~~~~~~--~~~Y~~~----~---~~~Lr----~aia~~~~v~~~----~I~it~G~~~ 85 (360)
T PRK07392 23 AILDFSASINPLGPPESVIAAIQSALSA--LRHYPDP----D---YRELR----LALAQHHQLPPE----WILPGNGAAE 85 (360)
T ss_pred cEEEeCCcCCCCCCCHHHHHHHHHHHHH--hhcCCCc----C---HHHHH----HHHHHHhCcChh----hEEECCCHHH
Confidence 45788877764 578999998776643 2234421 1 12344 556677788874 47777775 5
Q ss_pred HHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCC----CCCHHHHHHHhhhcCCeEE
Q 014724 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG----LVDYDMLEKTAILFRPKLI 255 (419)
Q Consensus 180 A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~----~iD~d~Le~~l~~~~pklI 255 (419)
++..++.++. +||.|++.+|.+..+.. .+...|+. +++++.+++++ ..|++++++.. .+++++
T Consensus 86 ~i~~~~~~l~-~g~~vlv~~P~y~~~~~--------~~~~~g~~--~~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 152 (360)
T PRK07392 86 LLTWAGRELA-QLRAVYLITPAFGDYRR--------ALRAFGAT--VKELPLPLDQPSPGLTLRLQTLPPQL--TPNDGL 152 (360)
T ss_pred HHHHHHHHhC-CCCeEEEECCCcHHHHH--------HHHHcCCe--EEEEecccccCCcccccCHHHHHHhc--cCCCEE
Confidence 8888888764 78999999998876542 23455664 44444543332 35677776543 367899
Q ss_pred EEcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCC---C-C-CcEEEeCCCCcC--CCCCeeEEEE
Q 014724 256 IAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K-Y-CDVVTTTTHKSL--RGPRGGMIFF 326 (419)
Q Consensus 256 i~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~---~-~-~Div~~S~hK~l--~GprgG~i~~ 326 (419)
++++|+||+ ..+.++|.++++++++ +|+|+++ ..+...+..++.+ + + --++++|++|+| +|.|.||+++
T Consensus 153 ~l~nP~NPTG~~~~~~~l~~l~~~~~~-~IiDE~y-~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~ 230 (360)
T PRK07392 153 LLNNPHNPTGKLWSREAILPLLEQFAL-VVVDEAF-MDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIA 230 (360)
T ss_pred EEeCCCCCCCCCcCHHHHHHHHHHCCE-EEEECch-hhhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeC
Confidence 999999995 5678899999999985 6669994 5555433222211 2 2 127899999986 7999999999
Q ss_pred eCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHH-HHHHHHHHHHHHHHHHHHHhC-CcEEecCCCcc
Q 014724 327 KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF-KVYQNKVVSNCRALASRLVEL-GYKLVSGGSDN 404 (419)
Q Consensus 327 ~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~-~~~~~~v~~n~~~l~~~L~~~-G~~v~~~~t~~ 404 (419)
++ ++.+.+.....++ +.+.....++..+++. .++ +...+.+.++++.+.+.|++. |+.+.+ +..
T Consensus 231 ~~------~~~~~~~~~~~~~---~~s~~~q~~~~~~l~~---~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~--~~~ 296 (360)
T PRK07392 231 HP------DRLQRWQQWRDPW---PVNGLAAAAAIAALAD---RDFQQQTWAWLPPAREALFQGLASLPGLTPLP--SAA 296 (360)
T ss_pred CH------HHHHHHHhhCCCC---CCCHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHHHHhCCCcEECC--CCC
Confidence 76 5666665433221 1122222222333332 233 344566778888899999886 887765 345
Q ss_pred eeEEEEeC
Q 014724 405 HLVLVDLR 412 (419)
Q Consensus 405 hlv~vd~~ 412 (419)
+++|+++.
T Consensus 297 ~fl~~~~~ 304 (360)
T PRK07392 297 NFLLVQSQ 304 (360)
T ss_pred CEEEEEcC
Confidence 67888874
No 206
>PRK05839 hypothetical protein; Provisional
Probab=99.77 E-value=8.5e-17 Score=161.98 Aligned_cols=270 Identities=14% Similarity=0.100 Sum_probs=166.1
Q ss_pred hcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChH-H
Q 014724 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 179 (419)
Q Consensus 103 ~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt-~ 179 (419)
..|+|..+++. +++.+.+++.+.... ...|+.. .|. .++.+.+++++++.+|.+.+ . .+|++++|+ +
T Consensus 25 ~~i~l~~~~p~~~~~~~~~~a~~~~~~~--~~~Y~~~---~G~---~~lr~aia~~l~~~~g~~~~-~-~~I~it~G~~~ 94 (374)
T PRK05839 25 KGLDLTIGEPQFETPKFIQDALKNNAHL--LNKYPKS---AGE---ESLREAQRGFFKRRFKIELK-E-NELIPTFGTRE 94 (374)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHhhc--cCCCCCC---CCC---HHHHHHHHHHHHHHhCCCCC-c-ceEEEecCcHH
Confidence 56777777643 578888888765421 2234431 232 35666677888888785321 1 257888885 5
Q ss_pred HHHHHHHHcc--CCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCC-CCCCCHHHHHHHhhhcCCeEEE
Q 014724 180 ANFEVYTAIL--KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLII 256 (419)
Q Consensus 180 A~~~~~~all--~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~-~~~iD~d~Le~~l~~~~pklIi 256 (419)
|+..++.+++ ++||.|+++.|.+..+.. .+...|. ++++++.+++ ++.+|.++.+ + .++|+|+
T Consensus 95 al~~~~~~~~~~~~gd~vlv~~P~y~~~~~--------~~~~~g~--~v~~v~~~~~~~~~~d~~~~~--~--~~~k~v~ 160 (374)
T PRK05839 95 VLFNFPQFVLFDKQNPTIAYPNPFYQIYEG--------AAIASRA--KVLLMPLTKENDFTPSLNEKE--L--QEVDLVI 160 (374)
T ss_pred HHHHHHHHHhcCCCCCEEEECCCCchhhHH--------HHHhcCC--EEEEeecccccCCcCCcchhh--h--ccccEEE
Confidence 7877777764 589999999998766532 2234555 5555556533 3566665432 2 3689999
Q ss_pred EcCCCCCCc-----CChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC---------C-CcEEEeCCCCcC--CCC
Q 014724 257 AGASAYPRD-----FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK---------Y-CDVVTTTTHKSL--RGP 319 (419)
Q Consensus 257 ~~~s~~p~~-----~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~---------~-~Div~~S~hK~l--~Gp 319 (419)
+++|+||+- ..+++|.++|+++|++||+|+++ ..+...+..++.+. + --+++.|++|+| +|.
T Consensus 161 i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y-~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~Gl 239 (374)
T PRK05839 161 LNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECY-SEIYENTPPPSLLEASILVGNESFKNVLVINSISKRSSAPGL 239 (374)
T ss_pred EeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccch-hhcccCCCCCCHhhhhcccCccccCcEEEEeccccccCCccc
Confidence 999999962 24678888899999999999995 44433222222111 1 127899999974 899
Q ss_pred CeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEec
Q 014724 320 RGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS 399 (419)
Q Consensus 320 rgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~ 399 (419)
|.||+++++ ++.+.+.........+.+.....++ ..++.. ....++..+++.++++.+.+.| |+. .+
T Consensus 240 RiG~ii~~~------~~~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~--~~~~~~~~~~~~~~~~~~~~~l---~~~-~p 306 (374)
T PRK05839 240 RSGFIAGDA------SILKKYKAYRTYLGCASPLPLQKAA-AVAWLD--DEHAEFFRNIYAKNLKLAREIL---GIT-IP 306 (374)
T ss_pred eeEEEecCH------HHHHHHHHHHhhcCCCCChHHHHHH-HHHhcc--chHHHHHHHHHHHHHHHHHHhc---CCC-CC
Confidence 999999876 5666655432111112232222222 223321 2334666777777777776655 443 22
Q ss_pred CCCcceeEEEEeC
Q 014724 400 GGSDNHLVLVDLR 412 (419)
Q Consensus 400 ~~t~~hlv~vd~~ 412 (419)
....++|+++.
T Consensus 307 --~gg~fi~~~~~ 317 (374)
T PRK05839 307 --PATFYVWLPVD 317 (374)
T ss_pred --CeeEEEEEeCC
Confidence 35677898874
No 207
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.77 E-value=1.3e-17 Score=168.20 Aligned_cols=212 Identities=17% Similarity=0.145 Sum_probs=146.0
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccc
Q 014724 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (419)
Q Consensus 142 g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g 221 (419)
+++....|| ++++++.|.+. .+.++||+.|+.+++ ++++|||+|+++++.|++.+.... ..+...|
T Consensus 48 ~~p~~~~Le----~~la~l~g~~~-----al~~~SG~~Al~~~l-~~l~pGd~Vi~~~~~y~~t~~~~~----~~~~~~g 113 (380)
T PRK06176 48 GNPTRFALE----ELIADLEGGVK-----GFAFASGLAGIHAVF-SLFQSGDHVLLGDDVYGGTFRLFD----KVLVKNG 113 (380)
T ss_pred CChhHHHHH----HHHHHHhCCCC-----EEEECCHHHHHHHHH-HHcCCCCEEEEcCCChhHHHHHHH----HHHHhcC
Confidence 445567777 56888889776 278899999998666 578999999999988876542110 0112233
Q ss_pred cccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcC
Q 014724 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (419)
Q Consensus 222 ~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~ 299 (419)
. ++..++ ..|++++++.+++ ++++|++.+|+||+ ..|+++|.++|+++|+++++|+++..+.. .
T Consensus 114 i--~v~~vd------~~d~e~l~~ai~~-~t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD~t~a~~~~-----~ 179 (380)
T PRK06176 114 L--SCTIID------TSDLSQIKKAIKP-NTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFATPYY-----Q 179 (380)
T ss_pred e--EEEEcC------CCCHHHHHHhcCc-CceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEECCcccccc-----C
Confidence 3 433332 2489999998865 79999999999884 67999999999999999999999765432 2
Q ss_pred CCCC-CCcEEEeCCCCcCCCCC---eeEEEEeCCCcchhhHHHHhhhcccC-CCCCCChHHHHHHHHHHHHHhcChHHHH
Q 014724 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFP-GLQGGPHNHTIGGLAVCLKHAQSPEFKV 374 (419)
Q Consensus 300 ~~~~-~~Div~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~~-~~~g~p~~~~iaala~al~~~~~~~~~~ 374 (419)
.|++ ++|++++|+||++.|+. ||+++.+++ ++.+++...... +..-+|. .+. ..+..+ ..+..
T Consensus 180 ~p~~~gaDivv~S~tK~l~g~~d~~gG~vv~~~~-----~~~~~~~~~~~~~G~~~~~~----~~~-l~~~gl--~tl~~ 247 (380)
T PRK06176 180 NPLLLGADIVVHSGTKYLGGHSDVVAGLVTTNNE-----ALAQEIAFFQNAIGGVLGPQ----DSW-LLQRGI--KTLGL 247 (380)
T ss_pred CccccCCCEEEecCceeccCCccceeeEEEecHH-----HHHHHHHHHHHHhcCCCCHH----HHH-HHHhcc--CcHHH
Confidence 3445 89999999999998874 788888764 555554432111 1111121 111 112122 23566
Q ss_pred HHHHHHHHHHHHHHHHHhC
Q 014724 375 YQNKVVSNCRALASRLVEL 393 (419)
Q Consensus 375 ~~~~v~~n~~~l~~~L~~~ 393 (419)
+.+++.+|+..+++.|+++
T Consensus 248 R~~~~~~~a~~la~~L~~~ 266 (380)
T PRK06176 248 RMEAHQKNALCVAEFLEKH 266 (380)
T ss_pred HHHHHHHHHHHHHHHHHhC
Confidence 7788889999999999886
No 208
>PRK04311 selenocysteine synthase; Provisional
Probab=99.77 E-value=4.5e-17 Score=167.24 Aligned_cols=251 Identities=17% Similarity=0.173 Sum_probs=157.6
Q ss_pred cCCCChHHHHHHHhhhhhccCCC-CCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHc
Q 014724 110 SENFTSRAVMEAVGSCLTNKYSE-GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI 188 (419)
Q Consensus 110 sen~~~~~V~eal~~~l~~~y~~-g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~al 188 (419)
+-.++++++++++.+.+.+ |.. .|.-.....| ...+. +++.+++++|.+. + +.++||+.|+..++.+
T Consensus 94 g~s~l~~~v~eav~~~~~~-~~~le~~l~~g~~g-~r~~~----~e~~lA~l~Gae~----a-~vv~sgtaAl~l~l~~- 161 (464)
T PRK04311 94 GRALLSEAAIEAVTEAARG-YSNLEYDLATGKRG-SRDRA----LAALLCALTGAED----A-LVVNNNAAAVLLALNA- 161 (464)
T ss_pred CCCCCCHHHHHHHHHHHhc-ccccccchhhcccc-hHHHH----HHHHHHHHhCCCe----E-EEECCHHHHHHHHHHH-
Confidence 3456799999999888754 421 1100000112 11234 4477889999876 2 6788999999888865
Q ss_pred cCCCCEEEEeCCCCC---ccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--
Q 014724 189 LKPHDRIMGLDLPHG---GHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP-- 263 (419)
Q Consensus 189 l~pGD~Vl~~~~~~~---g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p-- 263 (419)
+.+||+|++.+.++. +.+... ..+...|. +.+.++. +...+++++++.+.+ ++++|++.+++|+
T Consensus 162 l~~GdeVIvs~~e~~~~ggs~~i~-----~~~~~~G~--~l~~v~~---~~~t~~~dle~aI~~-~TklV~~vh~sN~~i 230 (464)
T PRK04311 162 LAAGKEVIVSRGELVEIGGAFRIP-----DVMRQAGA--RLVEVGT---TNRTHLRDYEQAINE-NTALLLKVHTSNYRI 230 (464)
T ss_pred hCCCCEEEEcchhhhhcCcchhhH-----HHHHHCCc--EEEEECC---CCCCCHHHHHHhcCc-cCeEEEEEcCCCccc
Confidence 589999999875432 211110 11233454 4444443 234679999999975 7899887776654
Q ss_pred ----CcCChHHHHHHHHHhCCEEEEeccccccccc---------cCCcCCCCC-CCcEEEeCCCCcCCCCCeeEEEEeCC
Q 014724 264 ----RDFDYPRMRQIADAVGALLMMDMAHISGLVA---------ASVVADPFK-YCDVVTTTTHKSLRGPRGGMIFFKKD 329 (419)
Q Consensus 264 ----~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~---------~g~~~~~~~-~~Div~~S~hK~l~GprgG~i~~~~~ 329 (419)
...|+++|+++|++||+++++|.+ +|... ......+++ ++|++++|.||+|.||.+|++++++
T Consensus 231 ~G~~~~~dl~eI~~lak~~gi~vivD~g--sG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp~~G~i~g~~- 307 (464)
T PRK04311 231 EGFTKEVSLAELAALGKEHGLPVVYDLG--SGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGPQAGIIVGKK- 307 (464)
T ss_pred cccCCcCCHHHHHHHHHHcCCeEEEECC--CcccccchhccCCCCCchhhHHhcCCcEEEecCcccccCCceEEEEEcH-
Confidence 246999999999999999999995 33321 111112233 8999999999999999999999987
Q ss_pred CcchhhHHHHhhhcccC-CCCCCChHHHHHHHHHHHHHhcChH-----------HHHHHHHHHHHHHHHHHHHHhC
Q 014724 330 PVLGVELESAINNAVFP-GLQGGPHNHTIGGLAVCLKHAQSPE-----------FKVYQNKVVSNCRALASRLVEL 393 (419)
Q Consensus 330 ~~~~~~l~~~i~~~~~~-~~~g~p~~~~iaala~al~~~~~~~-----------~~~~~~~v~~n~~~l~~~L~~~ 393 (419)
++.+++...... .+. ..-..++++...+.....++ +....+++.++++.++++|++.
T Consensus 308 -----~li~~l~~~~~~r~lr--~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~ 376 (464)
T PRK04311 308 -----ELIARLKKHPLKRALR--VDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAA 376 (464)
T ss_pred -----HHHHHHhhchhHHHHh--cchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhc
Confidence 566655421100 000 00112445554554332211 1122377888999999999875
No 209
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.77 E-value=1.9e-17 Score=171.59 Aligned_cols=207 Identities=16% Similarity=0.142 Sum_probs=133.8
Q ss_pred hcccccccC-CCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCc-eeEecCCh-HH
Q 014724 103 KSLELIASE-NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWG-VNVQPLSG-SP 179 (419)
Q Consensus 103 ~~i~L~~se-n~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~-v~V~~~sG-t~ 179 (419)
+.|++..++ ++.++..++++...+... .|+.. .++. ...|+.+++++.+.++......+ .+|++++| ++
T Consensus 95 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~---~Y~~p--~g~~---~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~ 166 (521)
T TIGR03801 95 DIISYVIDQLGFDPDAFLYEMCDGIIGD---NYPVP--DRML---PHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTA 166 (521)
T ss_pred HHHhhcCCCCCCCCCHHHHHHHHHhhcC---CCCCC--CCCH---HHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHH
Confidence 346666665 444555556665553221 24321 1222 35555555666665543211110 14666666 57
Q ss_pred HHHHHHHH-----ccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCC-C-----CCCCHHHHHHHhh
Q 014724 180 ANFEVYTA-----ILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-T-----GLVDYDMLEKTAI 248 (419)
Q Consensus 180 A~~~~~~a-----ll~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~-~-----~~iD~d~Le~~l~ 248 (419)
|+..++.+ +++|||+|++++|.+..+.. .+.+.+.++++++++.+++ + +.+|.+++++++.
T Consensus 167 al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~--------~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~ 238 (521)
T TIGR03801 167 AMCYIFDSLKANELLKKGDKIALMTPIFTPYLE--------IPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRD 238 (521)
T ss_pred HHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHH--------HHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhcC
Confidence 88888876 78999999999998876542 1234444456666655432 2 7899999998765
Q ss_pred hcCCeEEEEcCCCCCC--cC---ChHHHHHHHHHh--CCEEEEeccccccccccCCcCCCCC---CCcEEEeCCCCcC--
Q 014724 249 LFRPKLIIAGASAYPR--DF---DYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFK---YCDVVTTTTHKSL-- 316 (419)
Q Consensus 249 ~~~pklIi~~~s~~p~--~~---dl~~I~~ia~~~--ga~livD~ah~~Gl~~~g~~~~~~~---~~Div~~S~hK~l-- 316 (419)
.++|+|++++|+||+ .. ++++|+++|++| +++||+|+++. .+.. ...+.+. ..-+++.|+||+|
T Consensus 239 -~~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~-~f~~--~~~sl~~~~~~~vI~v~SfSK~fg~ 314 (521)
T TIGR03801 239 -PSIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYG-TFVD--DFRSLFAELPYNTIGVYSFSKYFGA 314 (521)
T ss_pred -CCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCch-hhcc--cccchhhhCCCCEEEEEcchhhccC
Confidence 489999999999995 33 478889999987 99999999953 4432 1122222 2338899999987
Q ss_pred CCCCeeEEEEeCC
Q 014724 317 RGPRGGMIFFKKD 329 (419)
Q Consensus 317 ~GprgG~i~~~~~ 329 (419)
+|+|.|+++.+++
T Consensus 315 ~G~RlG~i~~~~~ 327 (521)
T TIGR03801 315 TGWRLGTIALHKD 327 (521)
T ss_pred chhhhhhhhcCch
Confidence 8999999998764
No 210
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.77 E-value=2.7e-17 Score=167.24 Aligned_cols=242 Identities=16% Similarity=0.192 Sum_probs=145.1
Q ss_pred HHHHHHHHHHHHHcC--CCCCCCceeEe---cCChHHHHHHHHH---HccCCCCEEEEeCCCCCccccCccccccccccc
Q 014724 148 ELETLCQKRALAAFN--LDENKWGVNVQ---PLSGSPANFEVYT---AILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSG 219 (419)
Q Consensus 148 ~lE~~~~~~la~~~g--~~~~~~~v~V~---~~sGt~A~~~~~~---all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~ 219 (419)
++.+.+.+++.+..+ ++++ +|. +.+|++|+.+++. ++++|||+|++++|.|.++.. .+..
T Consensus 76 ~lR~aia~~~~~~~~~~~~~~----~v~~~~t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~--------~~~~ 143 (404)
T PTZ00376 76 SFIEAAQKLLFGEASYALAEK----RIATVQALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVN--------IFKS 143 (404)
T ss_pred HHHHHHHHHhcCCCccccccC----eEEEeeccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHH--------HHHH
Confidence 566566666544333 2332 243 3344567766654 678999999999999877642 2345
Q ss_pred cccccEEEecccC-CCCCCCCHHHHHHHhhhc--CCeEEEEcCCCCCCc-----CChHHHHHHHHHhCCEEEEecccccc
Q 014724 220 TSIYFESMPYRLD-ESTGLVDYDMLEKTAILF--RPKLIIAGASAYPRD-----FDYPRMRQIADAVGALLMMDMAHISG 291 (419)
Q Consensus 220 ~g~~~~~v~~~~~-~~~~~iD~d~Le~~l~~~--~pklIi~~~s~~p~~-----~dl~~I~~ia~~~ga~livD~ah~~G 291 (419)
.|. +++++++. ++++.+|++.+++.+++. +.+++++++|+||+- .++++|.++|++||++||+|++ |.+
T Consensus 144 ~G~--~~~~v~l~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~-Y~~ 220 (404)
T PTZ00376 144 AGL--NVKEYRYYDPKTKGLDFDGMLEDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMA-YQG 220 (404)
T ss_pred cCC--ceeeccccCcccCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehh-hcC
Confidence 666 44555552 235789999999998642 346777899999962 3567889999999999999999 456
Q ss_pred ccccCC---cCC--CCC--C-CcEEEeCCCCcC--CCCCeeEEE---EeCCCcchhhHHH----HhhhcccCCCCCCChH
Q 014724 292 LVAASV---VAD--PFK--Y-CDVVTTTTHKSL--RGPRGGMIF---FKKDPVLGVELES----AINNAVFPGLQGGPHN 354 (419)
Q Consensus 292 l~~~g~---~~~--~~~--~-~Div~~S~hK~l--~GprgG~i~---~~~~~~~~~~l~~----~i~~~~~~~~~g~p~~ 354 (419)
+.+.+. ... .+. + --++++|+||+| +|+|.||++ .++ ++.+ .+........ ++++.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRvG~~~~~~~~~------~~~~~l~~~~~~~~~~~~-~~~~~ 293 (404)
T PTZ00376 221 FASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMGLYGERIGALHIVCANK------EEAANVLSQLKLIIRPMY-SSPPI 293 (404)
T ss_pred ccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCcccccccccceEEEEeCCH------HHHHHHHHHHHHHHhhhc-CCCch
Confidence 554321 100 011 1 127899999987 699999984 344 3333 2322111111 12222
Q ss_pred HHHHHHHHHHHHhc--C---hHHHHHHHHHHHHHHHHHHHHHhCCc----EEecCCCcceeEEEEeC
Q 014724 355 HTIGGLAVCLKHAQ--S---PEFKVYQNKVVSNCRALASRLVELGY----KLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 355 ~~iaala~al~~~~--~---~~~~~~~~~v~~n~~~l~~~L~~~G~----~v~~~~t~~hlv~vd~~ 412 (419)
....+...+++.-. + ...++..+++.++++.+.+.|++.|+ .+.. .....++|++++
T Consensus 294 ~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~-p~gg~f~~~~~~ 359 (404)
T PTZ00376 294 HGARIADRILSDPELRAEWLSELKEMSGRIQNMRQLLYDELKALGSPGDWEHII-NQIGMFSFTGLT 359 (404)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccc-cCceEEEecCCC
Confidence 22222232332210 0 11234456778889999999998753 3332 233456787753
No 211
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.77 E-value=8.2e-17 Score=164.88 Aligned_cols=250 Identities=16% Similarity=0.176 Sum_probs=155.3
Q ss_pred cCCCChHHHHHHHhhhhhccCCC-CCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHc
Q 014724 110 SENFTSRAVMEAVGSCLTNKYSE-GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI 188 (419)
Q Consensus 110 sen~~~~~V~eal~~~l~~~y~~-g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~al 188 (419)
+-.++|+.|++++.+.+.+ |.. .|.-.....| ...+.+ ++.+++++|.+.. ++++||+.|+.+++. .
T Consensus 89 g~s~l~~~vieAv~~~~~~-y~~l~~~l~~g~~g-~r~~~l----e~~lA~l~gae~a-----lvv~sg~aAi~l~l~-~ 156 (454)
T TIGR00474 89 GRAPLAEEAIEAVTDAARG-YSNLEYDLETGKRG-SRYSHV----EGLLCELTGAEDA-----LVVNNNAAAVLLALN-T 156 (454)
T ss_pred CCCCCCHHHHHHHHHHHhc-ccchhccccccccc-hHHHHH----HHHHHHHhCCCcE-----EEECCHHHHHHHHHH-H
Confidence 3346789999999888753 321 1110000112 112344 4778899999862 668899999988884 4
Q ss_pred cCCCCEEEEeCCCC---CccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--
Q 014724 189 LKPHDRIMGLDLPH---GGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP-- 263 (419)
Q Consensus 189 l~pGD~Vl~~~~~~---~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p-- 263 (419)
+.+||+|++.+..| |+.+... ..+...|. +.+.++. +...|++++++.+.+ ++++|++.+++|+
T Consensus 157 l~~GdeVIvs~~e~v~~ggs~~i~-----~~~~~~G~--~~~~v~~---~~~~~l~dle~aI~~-~T~lv~~~h~sN~~~ 225 (454)
T TIGR00474 157 LAKGKEVIVSRGELVEIGGSFRIP-----DVMEQSGA--KLVEVGT---TNRTHLKDYEDAITE-NTALLLKVHTSNYRI 225 (454)
T ss_pred hCCcCEEEECCChhhhhcchhhHH-----HHHHHcCC--EEEEeCC---CCCCCHHHHHHhcCc-CCEEEEEEccCcccc
Confidence 68999999987653 3322110 11233454 4445443 234689999999875 7898887666554
Q ss_pred ----CcCChHHHHHHHHHhCCEEEEecccccccccc----C--CcC---CCCC-CCcEEEeCCCCcCCCCCeeEEEEeCC
Q 014724 264 ----RDFDYPRMRQIADAVGALLMMDMAHISGLVAA----S--VVA---DPFK-YCDVVTTTTHKSLRGPRGGMIFFKKD 329 (419)
Q Consensus 264 ----~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~----g--~~~---~~~~-~~Div~~S~hK~l~GprgG~i~~~~~ 329 (419)
...|+++|+++||+||+++++|.+ +|.... + ..+ .+++ ++|++++|.||+|.||.+|++++++
T Consensus 226 ~G~~~~~dl~~I~~la~~~g~~vivD~~--sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp~~G~i~g~~- 302 (454)
T TIGR00474 226 VGFTEEVSIAELVALGREHGLPVMEDLG--SGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGPQAGIIVGKK- 302 (454)
T ss_pred cCCCCCCCHHHHHHHHHHcCCeEEEECC--CcccccchhccCCCCcccccHhHcCCCEEEecCccccCCCeEEEEEECH-
Confidence 256999999999999999999974 454311 1 111 2223 8999999999999999999999987
Q ss_pred CcchhhHHHHhhhcccCC-CCCCChHHHHHHHHHHHHHhcChH-----------HHHHHHHHHHHHHHHHHHHHh
Q 014724 330 PVLGVELESAINNAVFPG-LQGGPHNHTIGGLAVCLKHAQSPE-----------FKVYQNKVVSNCRALASRLVE 392 (419)
Q Consensus 330 ~~~~~~l~~~i~~~~~~~-~~g~p~~~~iaala~al~~~~~~~-----------~~~~~~~v~~n~~~l~~~L~~ 392 (419)
++.+++......- +. ..-..++++...+.....++ +....+++.+++..++++|++
T Consensus 303 -----~~i~~l~~~~l~r~lr--~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~ 370 (454)
T TIGR00474 303 -----ELIERLKKNPLTRALR--VDKLTLAALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRLKA 370 (454)
T ss_pred -----HHHHhhhhchhHHHHh--hChHHHHHHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHHHh
Confidence 4554443211000 00 00012334444444333221 112235788899999999987
No 212
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.77 E-value=1.4e-16 Score=161.97 Aligned_cols=277 Identities=14% Similarity=0.126 Sum_probs=163.4
Q ss_pred hhcccccccCCC--ChHHHHHHHhhhhhccCC----CCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecC
Q 014724 102 FKSLELIASENF--TSRAVMEAVGSCLTNKYS----EGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPL 175 (419)
Q Consensus 102 ~~~i~L~~sen~--~~~~V~eal~~~l~~~y~----~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~ 175 (419)
.+.|+|..+++. +++.|.+++.+.+.+... .+|.. ..|.+ .+.+.+++++.+ .+++++ +|+++
T Consensus 33 ~~~i~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~Y~p---~~g~~---~lr~aia~~~~~-~~~~~d----~I~it 101 (402)
T TIGR03542 33 ADIIRLGIGDTTQPLPASVIEAFHNAVDELASEETFRGYGP---EQGYP---FLREAIAENDYR-GRIDPE----EIFIS 101 (402)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHhcccccccccCCCC---CCCCH---HHHHHHHHHHHh-cCCCHH----HEEEC
Confidence 345888877754 578899998887653211 12311 12332 455444443221 156653 47778
Q ss_pred ChH-HHHHHHHHHccCCCCEEEEeCCCCCccccCcccccccccccccc-cc--------EEEecccCCC-CCCCCHHHHH
Q 014724 176 SGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-YF--------ESMPYRLDES-TGLVDYDMLE 244 (419)
Q Consensus 176 sGt-~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~-~~--------~~v~~~~~~~-~~~iD~d~Le 244 (419)
+|+ +|+..+ ..++.+||+|++++|.|.++.. .+...|. ++ +.++++.+++ ++.+|++.
T Consensus 102 ~Ga~~al~~l-~~l~~~gd~Vlv~~P~y~~~~~--------~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-- 170 (402)
T TIGR03542 102 DGAKCDVFRL-QSLFGSDNTVAVQDPVYPAYVD--------SNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPE-- 170 (402)
T ss_pred CCcHHHHHHH-HHhcCCCCEEEEeCCCCcchHH--------HHHHcCCccccccccccceEEEeecchhhCCCCCccc--
Confidence 875 577664 5677899999999998876532 1223343 00 3444444422 34445321
Q ss_pred HHhhhcCCeEEEEcCCCCCC--cC---ChHHHHHHHHHhCCEEEEeccccccccccCCcCCCC---CC---CcEEEeCCC
Q 014724 245 KTAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KY---CDVVTTTTH 313 (419)
Q Consensus 245 ~~l~~~~pklIi~~~s~~p~--~~---dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~---~~---~Div~~S~h 313 (419)
..++|+|++++|+||+ .. ++++|.++|++||++||+|+++ ..+...+..+.++ +. .-++++|++
T Consensus 171 ----~~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y-~~~~~~~~~~~~~~~~~~~~~~vi~~~SfS 245 (402)
T TIGR03542 171 ----EPKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAY-SAFISDPSLPHSIFEIPGAKECAIEFRSFS 245 (402)
T ss_pred ----cCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchh-hhhccCCCCCcchhhCCCCcccEEEEecCc
Confidence 1368999999999995 33 3788999999999999999995 4555433222222 22 126689999
Q ss_pred CcC--CCCCeeEEEEeCCCcchhhHH--------HHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHH
Q 014724 314 KSL--RGPRGGMIFFKKDPVLGVELE--------SAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNC 383 (419)
Q Consensus 314 K~l--~GprgG~i~~~~~~~~~~~l~--------~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~ 383 (419)
|.| +|.|.||+++++ ++. +.+......... +.+.....++..++........++..+.+.+++
T Consensus 246 K~~g~pGlRiG~~i~~~------~l~~~~~~~~~~~~~~~~~~~~~-~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 318 (402)
T TIGR03542 246 KTAGFTGVRLGWTVVPK------ELTYADGHSVIQDWERRQCTKFN-GASYPVQRAAEAAYAGEGLQPILEAISYYMENA 318 (402)
T ss_pred cccCCCCcceEEEEecH------HHhhcchhhHHHHHHHHhhhccc-CCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHH
Confidence 987 788999999987 332 222111111111 112112222222232211112344556677888
Q ss_pred HHHHHHHHhCCcEEecCCCcceeEEEEeCC
Q 014724 384 RALASRLVELGYKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 384 ~~l~~~L~~~G~~v~~~~t~~hlv~vd~~~ 413 (419)
+.+.+.|++.|+++.. +...+++|+++..
T Consensus 319 ~~~~~~L~~~~~~~~~-~~~~~f~~v~l~~ 347 (402)
T TIGR03542 319 RILRKALEAAGFKVYG-GEHAPYLWVKTPE 347 (402)
T ss_pred HHHHHHHHhcCceecC-CCceeEEEEECCC
Confidence 8999999988887764 3456789999864
No 213
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.77 E-value=1.3e-16 Score=161.68 Aligned_cols=279 Identities=19% Similarity=0.158 Sum_probs=168.7
Q ss_pred cccccccCC--CChHHHHHHHhhhhhccC--CCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCC--CCCCCceeEecCCh
Q 014724 104 SLELIASEN--FTSRAVMEAVGSCLTNKY--SEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPLSG 177 (419)
Q Consensus 104 ~i~L~~sen--~~~~~V~eal~~~l~~~y--~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~--~~~~~~v~V~~~sG 177 (419)
.++|..+.. ..++.+.+++...+.... ...|+.. .| ...+++.+.+++...++. +++ +|++++|
T Consensus 35 ~~~l~~g~p~~~~~~~v~~a~~~~~~~~~~~~~~y~~~---~g---~~~lr~~ia~~l~~~~~~~~~~~----~i~~t~G 104 (394)
T PRK06836 35 VFDFSLGNPSVPPPAAVKEALRELAEEEDPGLHGYMPN---AG---YPEVREAIAESLNRRFGTPLTAD----HIVMTCG 104 (394)
T ss_pred eEEecCcCCCCCCCHHHHHHHHHHHhcCCcCcccCCCC---CC---CHHHHHHHHHHHHHHhCCCCCcC----cEEEeCC
Confidence 467765542 246889998877664321 1123211 12 235555555666555544 342 3555655
Q ss_pred -HHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEE
Q 014724 178 -SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLII 256 (419)
Q Consensus 178 -t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi 256 (419)
++++..++.++++|||.|++++|.+.++.. .+...|. ++++++.+++++.+|++++++++.+ ++++|+
T Consensus 105 ~~~al~~~~~~l~~~gd~Vli~~p~~~~~~~--------~~~~~g~--~v~~v~~~~~~~~~d~~~l~~~~~~-~~~~v~ 173 (394)
T PRK06836 105 AAGALNVALKAILNPGDEVIVFAPYFVEYRF--------YVDNHGG--KLVVVPTDTDTFQPDLDALEAAITP-KTKAVI 173 (394)
T ss_pred hHHHHHHHHHHhcCCCCEEEEcCCCCccHHH--------HHHHcCC--EEEEEecCCccCcCCHHHHHhhcCc-CceEEE
Confidence 679999999999999999999988766532 1234455 5555556655578999999999864 799999
Q ss_pred EcCCCCCC--cC---ChHHHHHHHHH------hCCEEEEeccccccccccCCc-CCCCC--CCcEEEeCCCCcC--CCCC
Q 014724 257 AGASAYPR--DF---DYPRMRQIADA------VGALLMMDMAHISGLVAASVV-ADPFK--YCDVVTTTTHKSL--RGPR 320 (419)
Q Consensus 257 ~~~s~~p~--~~---dl~~I~~ia~~------~ga~livD~ah~~Gl~~~g~~-~~~~~--~~Div~~S~hK~l--~Gpr 320 (419)
+++++||+ .. ++++|.++|++ ||+++++|+++ ..+.+.+.. +..+. ...++++|++|+| +|.|
T Consensus 174 ~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~pGlR 252 (394)
T PRK06836 174 INSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPY-REIVYDGAEVPYIFKYYDNSIVVYSFSKSLSLPGER 252 (394)
T ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccc-cccccCCCCCCChHHccCcEEEEecchhhccCccee
Confidence 98899985 33 36778888998 89999999994 455544321 11122 2358899999987 5779
Q ss_pred eeEEEEeCCCcchhhHHHHhhhccc-CCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEec
Q 014724 321 GGMIFFKKDPVLGVELESAINNAVF-PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS 399 (419)
Q Consensus 321 gG~i~~~~~~~~~~~l~~~i~~~~~-~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~ 399 (419)
.||++.+++......+...+..... .+....+.. ...++...+ ... ...+++.++++.+.+.|++.|+++..
T Consensus 253 iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~q~~~~~~l----~~~--~~~~~~~~~r~~l~~~L~~~g~~~~~ 325 (394)
T PRK06836 253 IGYIAVNPEMEDADDLVAALVFANRILGFVNAPAL-MQRVVAKCL----DAT--VDVSIYKRNRDLLYDGLTELGFECVK 325 (394)
T ss_pred eEEEecCHHHhhhHHHHHHHHHHhhccccccCCHH-HHHHHHHHh----CCh--HHHHHHHHHHHHHHHHHHhCCCEeec
Confidence 9999987631000001111111100 011111111 122222222 111 12345666788899999988988764
Q ss_pred CCCcceeEEEEeC
Q 014724 400 GGSDNHLVLVDLR 412 (419)
Q Consensus 400 ~~t~~hlv~vd~~ 412 (419)
. ..+..+|+++.
T Consensus 326 ~-~gg~~~~~~~~ 337 (394)
T PRK06836 326 P-QGAFYLFPKSP 337 (394)
T ss_pred C-CceEEEEEeCC
Confidence 3 34566887764
No 214
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.77 E-value=2.3e-16 Score=161.68 Aligned_cols=217 Identities=18% Similarity=0.230 Sum_probs=150.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHc---------cCCCCEEEEeCCCCCccccCcccccccc
Q 014724 146 IDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI---------LKPHDRIMGLDLPHGGHLSHGFMTPKRR 216 (419)
Q Consensus 146 ~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~al---------l~pGD~Vl~~~~~~~g~~s~~~~~~~~~ 216 (419)
..++| +.+++++|.+. + +.++||+.|+..++.++ ++|||+|++++++|.++.. .
T Consensus 65 ~~~fe----~~lA~~~g~~~----~-v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~--------~ 127 (438)
T PRK15407 65 NDAFE----KKLAEFLGVRY----A-LLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVN--------P 127 (438)
T ss_pred HHHHH----HHHHHHhCCCe----E-EEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHH--------H
Confidence 45666 56788889865 2 67788999999988876 5899999999988766532 2
Q ss_pred ccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCCcCChHHHHHHHHHhCCEEEEeccccccccccC
Q 014724 217 VSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAAS 296 (419)
Q Consensus 217 i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g 296 (419)
+...|. +++.++++++++.+|++.+++.+.+ ++|+|++.++ ++...|+++|.++|+++|++||+|++|+.|....|
T Consensus 128 v~~~G~--~pv~vdvd~~~~~id~~~le~~i~~-~tkaVi~~~~-~G~p~dl~~I~~la~~~gi~vIeDaa~a~G~~~~g 203 (438)
T PRK15407 128 IIQNGL--VPVFVDVELPTYNIDASLLEAAVSP-KTKAIMIAHT-LGNPFDLAAVKAFCDKHNLWLIEDNCDALGSTYDG 203 (438)
T ss_pred HHHcCC--EEEEEecCCCcCCcCHHHHHHHcCc-CCeEEEEeCC-CCChhhHHHHHHHHHHCCCEEEEECccchhhhcCC
Confidence 334454 5666666656789999999999864 7898888753 34457899999999999999999999999876654
Q ss_pred CcCCCCCCCcEEEeCCC--CcCCCCCeeEEEEeCCCcchhhHHHHhhhcccCCC--------------------------
Q 014724 297 VVADPFKYCDVVTTTTH--KSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGL-------------------------- 348 (419)
Q Consensus 297 ~~~~~~~~~Div~~S~h--K~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~-------------------------- 348 (419)
..... ..|+.++|+| |.+....||+++++++ ++.+++......+.
T Consensus 204 ~~~G~--~gd~~~fSf~~~k~~~~geGG~l~t~d~-----~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (438)
T PRK15407 204 RMTGT--FGDIATLSFYPAHHITMGEGGAVFTNDP-----LLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFG 276 (438)
T ss_pred eeeec--cCceEEEeCCCCCCccccCceEEEECCH-----HHHHHHHHHHHhCccccccccccccccccccccccccccc
Confidence 32211 3488888887 6575556999999986 45443321100000
Q ss_pred ---------CC-CChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC
Q 014724 349 ---------QG-GPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL 393 (419)
Q Consensus 349 ---------~g-~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~ 393 (419)
.| +..++.+.| ++++.++. .+++..++.+++++++.+.|.+.
T Consensus 277 ~~~~~~~~~~G~n~rmsel~A-Aig~~qL~--~l~~~~~~R~~~a~~y~~~L~~~ 328 (438)
T PRK15407 277 YDHKYTYSHLGYNLKITDMQA-AIGLAQLE--KLPGFIEARKANFAYLKEGLASL 328 (438)
T ss_pred ccccccccccccccCccHHHH-HHHHHHHH--HHHHHHHHHHHHHHHHHHHhccC
Confidence 01 111222222 23455543 46778888899999999999875
No 215
>PLN02263 serine decarboxylase
Probab=99.77 E-value=2.1e-16 Score=160.98 Aligned_cols=242 Identities=16% Similarity=0.148 Sum_probs=168.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCC-CCceeEecCChHHHHHHHHHHccC--CCCEEEEeCCCCCccccCcccccccccccccc
Q 014724 146 IDELETLCQKRALAAFNLDEN-KWGVNVQPLSGSPANFEVYTAILK--PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 222 (419)
Q Consensus 146 ~~~lE~~~~~~la~~~g~~~~-~~~v~V~~~sGt~A~~~~~~all~--pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~ 222 (419)
..++|..+.+|+++++|.+++ .|| +++++||+||..++.+--+ +...|++++-.|.+.. |.+.+.|.
T Consensus 131 s~~~E~~Vi~wla~L~g~p~~~~~G--~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~--------KAa~llgi 200 (470)
T PLN02263 131 SRQFEVGVLDWFARLWEIEKNEYWG--YITNCGTEGNLHGILVGREVFPDGILYASRESHYSVF--------KAARMYRM 200 (470)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCeE--EEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHH--------HHHHhcCC
Confidence 468999999999999999863 465 5667889999988776633 3446666665554332 45567787
Q ss_pred ccEEEecccCCCCCCCCHHHHHHHhhhcC--CeEEEE--cCCCCCCcCChHHHHHHHHHhCC-----EEEEecccccccc
Q 014724 223 YFESMPYRLDESTGLVDYDMLEKTAILFR--PKLIIA--GASAYPRDFDYPRMRQIADAVGA-----LLMMDMAHISGLV 293 (419)
Q Consensus 223 ~~~~v~~~~~~~~~~iD~d~Le~~l~~~~--pklIi~--~~s~~p~~~dl~~I~~ia~~~ga-----~livD~ah~~Gl~ 293 (419)
.+..++ .+ +++.+|+++|++.+.+.+ |-+|+. ++...+...|+++|+++|+++|+ ||+||+|+ .|..
T Consensus 201 ~~~~Vp--~d-~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~-GG~~ 276 (470)
T PLN02263 201 ECVKVD--TL-VSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGAL-FGLM 276 (470)
T ss_pred cceEec--cC-CCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccc-hhhH
Confidence 655555 55 478999999999987543 555554 44455678899999999999997 99999994 4543
Q ss_pred cc--CCcCCCCC---CCcEEEeCCCCcCCCCCe-eEEEEeCCCcchhhHHHH-------hhhcccCCCCCCChHHHHHHH
Q 014724 294 AA--SVVADPFK---YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESA-------INNAVFPGLQGGPHNHTIGGL 360 (419)
Q Consensus 294 ~~--g~~~~~~~---~~Div~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~-------i~~~~~~~~~g~p~~~~iaal 360 (419)
.. .. ..+++ .+|.++.++||++..|-+ |+++++++ ..+. +... .+.++|+-+....+.+
T Consensus 277 lPf~~~-~~~~df~~~vDSIsvD~HK~l~~P~~cgvll~R~~------~~~~~~~~~~Yl~~~-d~ti~gSR~g~~al~l 348 (470)
T PLN02263 277 MPFVKR-APKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRME------HINVLSSNVEYLASR-DATIMGSRNGHAPIFL 348 (470)
T ss_pred hhhccc-ccccCCCcCccEEEECCccccCCCcCEEEEEEehh------hHhhhccChHhhCCC-CCCcCCCCCcHHHHHH
Confidence 21 11 11233 489999999999988855 88888874 2222 2111 1234454443334445
Q ss_pred HHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeEEEE
Q 014724 361 AVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVD 410 (419)
Q Consensus 361 a~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~vd 410 (419)
...++....++++++.++..+++++|.+.|++.|+.++.. .....|.+.
T Consensus 349 W~~L~~~G~~G~~~~i~~~~~~A~~l~~~l~~~g~~~~~~-p~s~~V~f~ 397 (470)
T PLN02263 349 WYTLNRKGYRGFQKEVQKCLRNAHYLKDRLREAGISAMLN-ELSSTVVFE 397 (470)
T ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeC-CCceEEEEe
Confidence 5677777777889999999999999999999999987753 344444443
No 216
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.77 E-value=4e-17 Score=163.81 Aligned_cols=233 Identities=16% Similarity=0.115 Sum_probs=150.9
Q ss_pred HHHHHHHcCCCCCCCceeEecCCh-HHHHHHHHHHccCCC-CEEEEeCCCCCccccCccccccccccccccccEEEeccc
Q 014724 154 QKRALAAFNLDENKWGVNVQPLSG-SPANFEVYTAILKPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 231 (419)
Q Consensus 154 ~~~la~~~g~~~~~~~v~V~~~sG-t~A~~~~~~all~pG-D~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~ 231 (419)
++.+++++|++++ +|++++| ++++..++.+++++| |+|++.+|.++.+.. .....|. +++++++
T Consensus 65 r~~ia~~~~~~~~----~I~~t~G~~~~l~~~~~~~~~~g~~~vlv~~p~y~~~~~--------~~~~~g~--~~~~v~~ 130 (364)
T PRK04781 65 RSALAALYGCAPE----QLLIGRGSDEAIDLLVRALCVPGRDAVLVTPPVFGMYAV--------CARLQNA--PLVEVPL 130 (364)
T ss_pred HHHHHHHhCcChH----HEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHH--------HHHHcCC--EEEEEec
Confidence 4567778898774 4777777 569999999999999 799998887643321 1234455 4444444
Q ss_pred C--CCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCChHHHHHHHHH--hCCEEEEeccccccccccCCcCCCCC-C
Q 014724 232 D--ESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPFK-Y 304 (419)
Q Consensus 232 ~--~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~dl~~I~~ia~~--~ga~livD~ah~~Gl~~~g~~~~~~~-~ 304 (419)
+ .+++.+|++++++.+...++++|++++|+||+ ..+.+++.++++. ++++||+|+++ ..+.+.......++ +
T Consensus 131 ~~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay-~~f~~~~~~~~~~~~~ 209 (364)
T PRK04781 131 VDGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAY-GEFSDVPSAVGLLARY 209 (364)
T ss_pred CCCccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcc-hhhcCCcchHHHHhhC
Confidence 3 12346899998766544588999999999985 5677777777764 47899999995 44443211001112 2
Q ss_pred C-cEEEeCCCCcC--CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHH
Q 014724 305 C-DVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVS 381 (419)
Q Consensus 305 ~-Div~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~ 381 (419)
. -++++|++|+| +|.|.||+++++ ++.+.+.....++.. ......++ ..++.........+..+++.+
T Consensus 210 ~~vi~~~SfSK~~gl~GlRvGy~v~~~------~l~~~l~~~~~~~~~--~~~~~~~a-~~~l~~~~~~~~~~~~~~~~~ 280 (364)
T PRK04781 210 DNLAVLRTLSKAHALAAARIGSLIANA------ELIAVLRRCQAPYPV--PTPCAALA-EQALSAPALAVTARRVAEVRA 280 (364)
T ss_pred CCEEEEecChhhcccccceeeeeeCCH------HHHHHHHhccCCCCC--CHHHHHHH-HHHHhcccHHHHHHHHHHHHH
Confidence 2 27899999986 699999999987 677777665443321 11222222 223322110123455667888
Q ss_pred HHHHHHHHHHhC-CcE-EecCCCcceeEEEEeC
Q 014724 382 NCRALASRLVEL-GYK-LVSGGSDNHLVLVDLR 412 (419)
Q Consensus 382 n~~~l~~~L~~~-G~~-v~~~~t~~hlv~vd~~ 412 (419)
+++.+.+.|++. |+. +.+ ++..++|+++.
T Consensus 281 ~r~~l~~~L~~~~~~~~~~p--~~g~f~~~~~~ 311 (364)
T PRK04781 281 ERERLHAALAQLPGVRRVYP--SQGNFLLVRFD 311 (364)
T ss_pred HHHHHHHHHHhCCCCCeECC--CCCcEEEEEcC
Confidence 889999999887 764 443 34566888874
No 217
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.76 E-value=6.5e-17 Score=162.59 Aligned_cols=252 Identities=17% Similarity=0.146 Sum_probs=160.2
Q ss_pred cccCCCC----hHHHHHHHhhhhhccC-------CCCCCCCCCCCchh-HHHHHHHHHHHHHHHHcCCCCCCCceeEecC
Q 014724 108 IASENFT----SRAVMEAVGSCLTNKY-------SEGLPGKRYYGGNE-YIDELETLCQKRALAAFNLDENKWGVNVQPL 175 (419)
Q Consensus 108 ~~sen~~----~~~V~eal~~~l~~~y-------~~g~p~~r~~~g~~-~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~ 175 (419)
.+|++|+ ++.+.+++.+.+.. | +.|..++|...|.. ..+++ ++.+++++|.+. + ++++
T Consensus 9 ~~s~~YL~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~gs~~~~g~~~~~~~~----e~~la~~~~~~~----~-l~~~ 78 (370)
T PRK05937 9 FVTNDFLGFSRSDTLVHEVEKRYRL-YCRQFPHAQLGYGGSRAILGPSSLLDDL----EHKIAHFHGAPE----A-FIVP 78 (370)
T ss_pred eECCCccCCCCCHHHHHHHHHHHHH-hccccCCCCCCCCCcCcccCChHHHHHH----HHHHHHHhCCCe----E-EEEC
Confidence 3567775 56777776666543 3 23455666555533 23444 578999999965 3 7889
Q ss_pred ChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhc-----
Q 014724 176 SGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF----- 250 (419)
Q Consensus 176 sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~----- 250 (419)
||+.||..+...+.++||.|+.....|++.+.. +..... ..+.++ .+|+++|++++++.
T Consensus 79 sG~~a~~~~~~~~~~~~d~ii~d~~~H~sv~~~--------~~~~~~--~~~~~~------~~d~~~l~~~l~~~~~~~~ 142 (370)
T PRK05937 79 SGYMANLGLCAHLSSVTDYVLWDEQVHISVVYS--------LSVISG--WHQSFR------HNDLDHLESLLESCRQRSF 142 (370)
T ss_pred ChHHHHHHHHHHhCCCCCEEEEEhhhhHHHHHH--------HHHcCC--ceEEec------CCCHHHHHHHHHhhhccCC
Confidence 999999877777778899998888888665421 111111 122332 47899999998742
Q ss_pred CCeEEEEcCCCCC--CcCChHHHHHHHHHhCCEEEEeccccccccccCCc----CCCCCCCcEEEeCCCCcCCCCCeeEE
Q 014724 251 RPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVV----ADPFKYCDVVTTTTHKSLRGPRGGMI 324 (419)
Q Consensus 251 ~pklIi~~~s~~p--~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~----~~~~~~~Div~~S~hK~l~GprgG~i 324 (419)
++++|++++++++ ...|+++|.++|+++|+++++|++|+.|....... ...++..++++.|++|.+ ||.|+.+
T Consensus 143 ~~~~v~v~~v~s~~G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~-g~~G~~v 221 (370)
T PRK05937 143 GRIFIFVCSVYSFKGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKAL-GSMGAAL 221 (370)
T ss_pred CcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhh-hcCceEE
Confidence 2446667765544 57899999999999999999999998886532210 011112346788999977 6788767
Q ss_pred EEeCCCcchhhHHHHhhhcccCC-CCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC
Q 014724 325 FFKKDPVLGVELESAINNAVFPG-LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL 393 (419)
Q Consensus 325 ~~~~~~~~~~~l~~~i~~~~~~~-~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~ 393 (419)
++.+ ++.+.+.....+. ..++.++..++++..+++.+... .+...+++.+++++|.+.|...
T Consensus 222 l~~~------~~~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~l~~~-~~~~~~~l~~l~~~l~~~l~~~ 284 (370)
T PRK05937 222 LSSS------EVKQDLMLNSPPLRYSTGLPPHLLISIQVAYDFLSQE-GELARKQLFRLKEYFAQKFSSA 284 (370)
T ss_pred EcCH------HHHHHHHHhCCCCeecCCCCHHHHHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHhcCCC
Confidence 7765 4433332211121 22334444566666677666432 3455677888888888887643
No 218
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.76 E-value=3.9e-17 Score=167.00 Aligned_cols=157 Identities=21% Similarity=0.257 Sum_probs=120.0
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccc
Q 014724 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (419)
Q Consensus 142 g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g 221 (419)
+++.++++| +.+++++|.++ + +.+.||+.|+++++.+++++||+|++++..|++...... ..+...|
T Consensus 62 ~~p~~~~le----~~lA~l~g~~~----a-v~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~----~~l~~~G 128 (433)
T PRK08134 62 SNPTVAVLE----ERVAALEGGVG----A-IATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLH----YTLRRFG 128 (433)
T ss_pred cChHHHHHH----HHHHHHhCCCc----E-EEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHH----HHHhhCC
Confidence 446567777 57888999876 2 788999999999999999999999999988876432100 0112234
Q ss_pred cccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CcCChHHHHHHHHHhCCEEEEeccccccccccCCcC
Q 014724 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (419)
Q Consensus 222 ~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p--~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~ 299 (419)
. ++..++.+ |++++++.+++ ++|+|++.+++|| ...|+++|+++|+++|+++++|++|..+.. .
T Consensus 129 i--~v~~vd~~------d~~~l~~~i~~-~TklV~~e~~~np~g~v~Di~~I~~la~~~gi~livD~t~a~~~~-----~ 194 (433)
T PRK08134 129 I--ETTFVKPG------DIDGWRAAIRP-NTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDSTFTTPYL-----L 194 (433)
T ss_pred e--EEEEECCC------CHHHHHHhcCC-CCeEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence 3 55554331 79999999975 8999999988888 468999999999999999999999877754 3
Q ss_pred CCCC-CCcEEEeCCCCcCCCCC---eeEEE
Q 014724 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIF 325 (419)
Q Consensus 300 ~~~~-~~Div~~S~hK~l~Gpr---gG~i~ 325 (419)
.|++ ++|++++|.||++.|+. ||+++
T Consensus 195 ~pl~~GaD~vv~S~tK~l~g~g~~~gG~v~ 224 (433)
T PRK08134 195 RPFEHGADLVYHSATKFLGGHGTAIGGVLV 224 (433)
T ss_pred CchhcCCCEEEeccccccCCCCCceEEEEE
Confidence 4555 89999999999887664 35554
No 219
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.76 E-value=1e-16 Score=163.24 Aligned_cols=241 Identities=14% Similarity=0.128 Sum_probs=158.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCceeEecCChH-HHHHHHHHHccC---CCCEEEEeCCCCCccccCccccccccccccc
Q 014724 146 IDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILK---PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (419)
Q Consensus 146 ~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt-~A~~~~~~all~---pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g 221 (419)
.-.+.+...+++++++|++..+. .+.+++|| .++.+++.++-. +||.|+++..+|.+.. +.+...|
T Consensus 103 ~~~l~~~~e~~~~~~~G~~~~~~--a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~--------kAi~~~G 172 (444)
T TIGR03531 103 LYKLTNKLVKDFLKLLGLRSIKS--AFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCI--------KAISTAG 172 (444)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCE--EEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHH--------HHHHHcC
Confidence 34555556688999999984221 25667777 577777777642 6899999886654432 3566777
Q ss_pred cccEEEecccCCCCCCCCHHHHHHHhhhc--CCeEEEEcCCCC-C--CcCChHHHHHHHHHhCCEEEEeccccccccccC
Q 014724 222 IYFESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAGASAY-P--RDFDYPRMRQIADAVGALLMMDMAHISGLVAAS 296 (419)
Q Consensus 222 ~~~~~v~~~~~~~~~~iD~d~Le~~l~~~--~pklIi~~~s~~-p--~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g 296 (419)
.....++...+++++.+|+++|++++++. +.++++++.+++ + ...|+++|+++|++||+++|+|+||..+.....
T Consensus 173 ~~pv~Vd~~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~~~ 252 (444)
T TIGR03531 173 FEPRVIETVLDGDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNKYM 252 (444)
T ss_pred CeEEEeeeeecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChhhh
Confidence 75444443245567899999999999752 345666665543 2 467999999999999999999999865432211
Q ss_pred CcC-CCCC--CCcEEEeCCCCcCCCCC-eeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHH
Q 014724 297 VVA-DPFK--YCDVVTTTTHKSLRGPR-GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF 372 (419)
Q Consensus 297 ~~~-~~~~--~~Div~~S~hK~l~Gpr-gG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~ 372 (419)
... ..++ .+|++++|+||++..|- ||+++++++ ++.+.+... +++.. .+ .....+ ..++.....+++
T Consensus 253 ~~~~~g~~~Grad~vv~s~hK~l~~pg~Gg~I~~~d~-----el~~~i~~~-y~g~~-~~-s~~~~~-~~~ll~~G~~g~ 323 (444)
T TIGR03531 253 ELINKAIKVGRVDAVVSSTDKNFMVPVGGAIIYSFDE-----NFIQEISKS-YPGRA-SA-SPSLDV-LITLLSLGSKGY 323 (444)
T ss_pred hhhhccccccCCCeEEEeCccCCCCCCCEEEEEECCH-----HHHHHHHHh-ccCCC-CC-hHHHHH-HHHHHHhCHHHH
Confidence 110 1122 37999999999986653 677778665 677777653 23221 11 122222 233444445678
Q ss_pred HHHHHHHHHHHHHHHHHHHhC----CcEEecCCCccee
Q 014724 373 KVYQNKVVSNCRALASRLVEL----GYKLVSGGSDNHL 406 (419)
Q Consensus 373 ~~~~~~v~~n~~~l~~~L~~~----G~~v~~~~t~~hl 406 (419)
+++.++..++++++.+.|++. |..+.. ...|.+
T Consensus 324 ~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~-~~~n~i 360 (444)
T TIGR03531 324 LELLKERKEMYKYLKELLQKLAERHGERLLD-TPENPI 360 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCcEeec-CCCCce
Confidence 899999999999999999763 677664 224444
No 220
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.76 E-value=2.5e-17 Score=165.99 Aligned_cols=214 Identities=17% Similarity=0.055 Sum_probs=146.6
Q ss_pred CchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCcccccccccccc
Q 014724 141 GGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGT 220 (419)
Q Consensus 141 ~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~ 220 (419)
.|++..+.+| ++++.+.+.+. .+.++||+.|+.+++.++++|||+|+++++.|+++..... ..+...
T Consensus 61 ~gnPt~~~Le----~~la~le~~~~-----~v~~sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~----~~l~~~ 127 (395)
T PRK05967 61 RGTPTTDALC----KAIDALEGSAG-----TILVPSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCD----TMLKRL 127 (395)
T ss_pred CCChHHHHHH----HHHHHHhCCCC-----EEEECcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHH----HHHHhc
Confidence 3667667777 45666666443 3788899999999999999999999999998877532100 012334
Q ss_pred ccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCc
Q 014724 221 SIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV 298 (419)
Q Consensus 221 g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~ 298 (419)
|. ++..++. -+.+.+++.+++ ++|+|++++|+||+ ..|+++|+++|+++|+++++|+++..++.
T Consensus 128 Gi--~v~~vd~------~~~e~l~~al~~-~TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD~t~a~p~~----- 193 (395)
T PRK05967 128 GV--EVEYYDP------EIGAGIAKLMRP-NTKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMDNTWATPLY----- 193 (395)
T ss_pred Ce--EEEEeCC------CCHHHHHHhcCc-CceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEECCccCcee-----
Confidence 54 3333322 135789998875 79999999999884 56899999999999999999999654432
Q ss_pred CCCCC-CCcEEEeCCCCcCCCCC---eeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHH
Q 014724 299 ADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKV 374 (419)
Q Consensus 299 ~~~~~-~~Div~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~ 374 (419)
..|++ |+|+++.|.+|++.|-. +|+++.++ ++.+++...... .|.. ..-..|. ..++.+ +.+.-
T Consensus 194 ~~pl~~GaDivv~S~tKy~~Gh~d~~~G~v~~~~------~~~~~l~~~~~~--~G~~-~~p~da~-l~~rgl--~Tl~l 261 (395)
T PRK05967 194 FRPLDFGVDISIHAATKYPSGHSDILLGTVSANE------KCWPQLLEAHGT--LGLC-AGPDDTY-QILRGL--RTMGI 261 (395)
T ss_pred cChhHcCCCEEEEecccccCCCCCeeEEEEEcCH------HHHHHHHHHHHH--cCCC-CCHHHHH-HHHcCc--ccHHH
Confidence 35666 89999999999987643 57766554 444444322111 1211 1112222 123332 23567
Q ss_pred HHHHHHHHHHHHHHHHHhC
Q 014724 375 YQNKVVSNCRALASRLVEL 393 (419)
Q Consensus 375 ~~~~v~~n~~~l~~~L~~~ 393 (419)
+.+++.+|+..++++|+++
T Consensus 262 R~~~~~~na~~lA~~L~~h 280 (395)
T PRK05967 262 RLEHHRKSALEIARWLEGR 280 (395)
T ss_pred HHHHHHHHHHHHHHHHHhC
Confidence 8899999999999999986
No 221
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.76 E-value=1.8e-17 Score=165.53 Aligned_cols=228 Identities=20% Similarity=0.206 Sum_probs=150.0
Q ss_pred HHHHHHcCCCCCCCceeEecCChH-HHHHHHHHHccCCC-CEEEEeCCCCCccccCccccccccccccccccEEEecccC
Q 014724 155 KRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD 232 (419)
Q Consensus 155 ~~la~~~g~~~~~~~v~V~~~sGt-~A~~~~~~all~pG-D~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~ 232 (419)
+.+++++|++++ +|.+++|+ +++..++.++++|| |+|++++|.+..+.. .+...|. ++++++++
T Consensus 67 ~aia~~~~~~~~----~I~it~Gs~~~i~~~~~~~~~~g~d~vlv~~P~y~~y~~--------~~~~~g~--~v~~v~~~ 132 (354)
T PRK04635 67 NAYSAYAGVAPE----QILTSRGADEAIELLIRAFCEPGQDSIACFGPTYGMYAI--------SAETFNV--GVKALPLT 132 (354)
T ss_pred HHHHHHhCcCHH----HEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHH--------HHHHcCC--EEEEEecC
Confidence 566778899885 47778875 69999999999999 899999988765421 1234565 44444454
Q ss_pred CCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCChHHHHHHHHHh-CCEEEEeccccccccccCCcCCCCC-CCc-E
Q 014724 233 ESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAV-GALLMMDMAHISGLVAASVVADPFK-YCD-V 307 (419)
Q Consensus 233 ~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~dl~~I~~ia~~~-ga~livD~ah~~Gl~~~g~~~~~~~-~~D-i 307 (419)
+++.+|.+.++. + .++|+|++++|+||+ ..+.+++.++++.. +++||+|++|. .+........... +.. +
T Consensus 133 -~~~~~~~~~l~~-~--~~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~-~~~~~~s~~~~~~~~~~~i 207 (354)
T PRK04635 133 -ADYQLPLDYIEQ-L--DGAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYI-EFCPEYSVADLLASYPNLV 207 (354)
T ss_pred -CCCCCCHHHHHh-c--cCCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchH-hhccCcchHHHHhhCCCEE
Confidence 357899999873 3 378999999999985 56888888888764 79999999963 3331110000011 112 7
Q ss_pred EEeCCCCcC--CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHH
Q 014724 308 VTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRA 385 (419)
Q Consensus 308 v~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~ 385 (419)
++.|+||+| +|.|.||++.++ ++.+.+.....++. .+.....++ ..++.....+..++..+++.+++++
T Consensus 208 v~~S~SK~~~l~GlRlG~~i~~~------~~~~~l~~~~~~~~--~~~~~~~~a-~~~l~~~~~~~~~~~~~~~~~~r~~ 278 (354)
T PRK04635 208 VLRTLSKAFALAGARCGFTLANE------ELIEILMRVIAPYP--VPLPVSEIA-TQALSEAGLARMKFQVLDLNAQGAR 278 (354)
T ss_pred EEechHHHhhhhHHHHhhhhCCH------HHHHHHHhhcCCCC--CCHHHHHHH-HHHHhcccHHHHHHHHHHHHHHHHH
Confidence 899999986 688999999887 67776654332221 121221222 2233221112235556778888899
Q ss_pred HHHHHHhCC-cEEecCCCcceeEEEEeC
Q 014724 386 LASRLVELG-YKLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 386 l~~~L~~~G-~~v~~~~t~~hlv~vd~~ 412 (419)
+.+.|++.+ +++.++ +..++|+++.
T Consensus 279 l~~~L~~~~~~~~~~~--~g~f~~~~~~ 304 (354)
T PRK04635 279 LQAALSMYGGAKVLEG--NGNYVLAKFD 304 (354)
T ss_pred HHHHHHhCCCceECCC--CCcEEEEECC
Confidence 999999875 776653 3456888763
No 222
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.76 E-value=3.6e-17 Score=163.07 Aligned_cols=257 Identities=14% Similarity=0.104 Sum_probs=172.6
Q ss_pred CChHHHHHHHhhhhhccCCCCCC-CCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCC
Q 014724 113 FTSRAVMEAVGSCLTNKYSEGLP-GKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKP 191 (419)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~g~p-~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~p 191 (419)
.+|..|++++.+.+.+....|.. ......+.++.+.++ .+++.++++|+.+.+ +.+.++.+|||.|+++++.+++++
T Consensus 2 ~~p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~-~~~~~l~~l~~~~~~-~~v~~~~gsgT~a~ea~~~nl~~~ 79 (349)
T TIGR01364 2 ALPEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVAN-EAESDLRELLNIPDN-YEVLFLQGGATGQFAAVPLNLLAE 79 (349)
T ss_pred CCCHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHH-HHHHHHHHHhCCCCC-ceEEEEcCCchHHHHHHHHhcCCC
Confidence 46889999999988642211111 111233456666666 578999999997432 335455566899999999999999
Q ss_pred CCEEEEeCCCCCccccCccccccccccccccccEEEecccC-CCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CcCCh
Q 014724 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD-ESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDY 268 (419)
Q Consensus 192 GD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~-~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p--~~~dl 268 (419)
||+++++.. |.+.+.+. +.+...|. +..+..+-. +....+|+++++. . .++++|.+.+..++ ...+
T Consensus 80 ~~~~l~i~~---G~fg~r~~---~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~v~~th~ETstGv~~~- 148 (349)
T TIGR01364 80 GKVADYIVT---GAWSKKAA---KEAKKYGV-VNVVASGKEGNYTKIPDPSTWEI--S-EDAAYVHYCANETIHGVEFR- 148 (349)
T ss_pred CCeEEEEEC---CHHHHHHH---HHHHHhCC-cEEEeccccCCCCCCCCHHhcCC--C-CCCCEEEEcCCCCcccEecc-
Confidence 999998864 33333321 12234565 454443211 1223577776652 2 36888877665544 3333
Q ss_pred HHHHHHHHHhCCEEEEeccccccccccCCcCCCCCCCcEEEeCCCCcCCCCCe-eEEEEeCCCcchhhHHHHhhhc----
Q 014724 269 PRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNA---- 343 (419)
Q Consensus 269 ~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~~~Div~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~~~---- 343 (419)
++++.+++++++|++++.|.. +..++..|++++|.||+| ||.| |+++.+++ +.+++...
T Consensus 149 ----~l~~~~~~l~iVDavss~g~~-----~id~~~~d~~~~ssqK~l-gP~Glg~l~~s~~------~~~~~~~~~~~~ 212 (349)
T TIGR01364 149 ----ELPDVKNAPLVADMSSNILSR-----PIDVSKFGLIYAGAQKNI-GPAGLTVVIVRKD------LLGRASRITPSM 212 (349)
T ss_pred ----eecccCCCeEEEEccccccCc-----cCCHHHccEEEEeccccc-CCCceEEEEECHH------HHhhcccCCCCc
Confidence 677778999999999887743 223335679999999988 6987 88888874 32222110
Q ss_pred -------ccCCCCCCChHHHHHHHHHHHHHhcCh-HHHHHHHHHHHHHHHHHHHHHhC-CcEEe
Q 014724 344 -------VFPGLQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVEL-GYKLV 398 (419)
Q Consensus 344 -------~~~~~~g~p~~~~iaala~al~~~~~~-~~~~~~~~v~~n~~~l~~~L~~~-G~~v~ 398 (419)
......++|+.+.+.++..+|+.+... +++++.+++.++++++.++|++. |+...
T Consensus 213 ~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~ 276 (349)
T TIGR01364 213 LNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRN 276 (349)
T ss_pred chHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeecc
Confidence 001123688899999999999998876 68999999999999999999998 66444
No 223
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.76 E-value=1.7e-16 Score=163.78 Aligned_cols=246 Identities=17% Similarity=0.157 Sum_probs=163.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCceeEecCChH-HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccE
Q 014724 147 DELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFE 225 (419)
Q Consensus 147 ~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt-~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~ 225 (419)
..+.+.+.+++....|+..+ . .+|+.|+|+ +|+.++...+++|||+|++-+|+|.+.+. .+...|. +
T Consensus 135 ~~LR~~ia~~l~~~~g~~~~-~-~~IiiT~G~q~al~l~~~~l~~pGd~v~vE~PtY~~~~~--------~~~~~g~--~ 202 (459)
T COG1167 135 PELREAIAAYLLARRGISCE-P-EQIVITSGAQQALDLLLRLLLDPGDTVLVEDPTYPGALQ--------ALEALGA--R 202 (459)
T ss_pred HHHHHHHHHHHHHhcCCccC-c-CeEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHH--------HHHHcCC--c
Confidence 36666677777766677653 2 257888886 59999999999999999999998866542 2344555 5
Q ss_pred EEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCC-CCCC--cCCh---HHHHHHHHHhCCEEEEeccccccccccCCcC
Q 014724 226 SMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS-AYPR--DFDY---PRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (419)
Q Consensus 226 ~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s-~~p~--~~dl---~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~ 299 (419)
.+++++| +..+|+|+||+.++.++||++++..+ +||+ ..+. ++|.++|++||++||.|+. +..+.+.+..+
T Consensus 203 ~~~vp~d--~~G~~~e~le~~~~~~~~k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~-y~el~~~~~p~ 279 (459)
T COG1167 203 VIPVPVD--EDGIDPEALEEALAQWKPKAVYVTPTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDY-YGELRYDGPPP 279 (459)
T ss_pred EEecCCC--CCCCCHHHHHHHHhhcCCcEEEECCCCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCc-chhhhcCCCCC
Confidence 5666665 45699999999998888999988754 4775 3333 6899999999999999998 44555554322
Q ss_pred CCCC-----CCcEEEeCCCCcC-CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHH-hcChHH
Q 014724 300 DPFK-----YCDVVTTTTHKSL-RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKH-AQSPEF 372 (419)
Q Consensus 300 ~~~~-----~~Div~~S~hK~l-~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~-~~~~~~ 372 (419)
.++. +--|.++||||++ +|.|.||++.++ ++.+++.........+++... ..+++.-+.. ......
T Consensus 280 ~~l~~ld~~~rViy~gSFSK~l~PglRlG~vv~p~------~~~~~~~~~k~~~~~~~s~~~-Q~~la~~l~~G~~~~hl 352 (459)
T COG1167 280 PPLKALDAPGRVIYLGSFSKTLAPGLRLGYVVAPP------ELIEKLLRLKQAADLGPSSLS-QAALAAFLLSGHYDRHL 352 (459)
T ss_pred CChHhhCCCCCEEEEeeehhhcccccceeeeeCCH------HHHHHHHHHHHHhcCCCChHH-HHHHHHHHHcCCHHHHH
Confidence 2332 2237899999997 899999999998 566655443222222232222 2233322221 111233
Q ss_pred HHHHHHHHHHHHHHHHHHHhCC--cEEecCCCcceeEEEEeCCc
Q 014724 373 KVYQNKVVSNCRALASRLVELG--YKLVSGGSDNHLVLVDLRPM 414 (419)
Q Consensus 373 ~~~~~~v~~n~~~l~~~L~~~G--~~v~~~~t~~hlv~vd~~~~ 414 (419)
++.++.+.+.++.+.+.|++.+ ...+......-++|+++...
T Consensus 353 ~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~gG~flwl~l~~~ 396 (459)
T COG1167 353 RRLRREYARRRDALLEALAEYLPELATWTRPEGGLFLWLELPEG 396 (459)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCeeeecCCceEEEEEEcCCC
Confidence 5556667777888889998863 22233223345689988654
No 224
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.76 E-value=4.3e-17 Score=165.97 Aligned_cols=159 Identities=16% Similarity=0.224 Sum_probs=121.1
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccc
Q 014724 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (419)
Q Consensus 142 g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g 221 (419)
|++.++.|| +.++++.|... + +.+.||+.|+.+++.++++|||+|+++.+.|++.... .. ..+...|
T Consensus 59 ~nPtv~~lE----~~la~leg~~~----a-v~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~--~~--~~l~~~G 125 (432)
T PRK06702 59 GNPTLAAFE----QKLAELEGGVG----A-VATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNL--FG--VSLRKLG 125 (432)
T ss_pred CCcHHHHHH----HHHHHHhCCCc----E-EEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHH--HH--HHHHHCC
Confidence 456677888 56788888876 2 7789999999999999999999999999888765321 00 0123345
Q ss_pred cccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcC
Q 014724 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (419)
Q Consensus 222 ~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~ 299 (419)
+ ++..++ ..+|++++++++++ ++|+|++..++||+ ..|+++|+++|+++|+++++|++....+ ..
T Consensus 126 i--~v~~vd-----~~~d~~~l~~~I~~-~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD~T~~tP~-----~~ 192 (432)
T PRK06702 126 I--DVTFFN-----PNLTADEIVALAND-KTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDNTLATPY-----LC 192 (432)
T ss_pred C--EEEEEC-----CCCCHHHHHHhCCc-CCeEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEECCCCchh-----hC
Confidence 4 444432 34799999999975 89999999999985 5699999999999999999999853322 23
Q ss_pred CCCC-CCcEEEeCCCCcCCCCC---eeEEEE
Q 014724 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFF 326 (419)
Q Consensus 300 ~~~~-~~Div~~S~hK~l~Gpr---gG~i~~ 326 (419)
.|++ ++||++.|++|++.|.- +|.++.
T Consensus 193 ~pl~~GADIvv~S~TKy~~Ghsd~l~G~v~~ 223 (432)
T PRK06702 193 QAFEHGANIIVHSTTKYIDGHASSLGGIVID 223 (432)
T ss_pred ChhhcCCCEEEEccccccCCCcceeceEEEe
Confidence 5666 89999999999987764 365553
No 225
>PRK07908 hypothetical protein; Provisional
Probab=99.75 E-value=2.8e-16 Score=156.67 Aligned_cols=263 Identities=14% Similarity=0.143 Sum_probs=167.3
Q ss_pred hhcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCCh-H
Q 014724 102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-S 178 (419)
Q Consensus 102 ~~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sG-t 178 (419)
.+.++|..++|. +|+.+++++...+.. . .+|+.. .|. .++ ++.+++++|++++ +|++++| +
T Consensus 22 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~-~~Y~~~---~g~---~~l----r~aia~~~~~~~~----~I~it~Ga~ 85 (349)
T PRK07908 22 PGLLDFAVNVRHDTPPEWLRERLAARLGD-L-AAYPST---EDE---RRA----RAAVAARHGRTPD----EVLLLAGAA 85 (349)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHhhH-h-hcCCCc---cch---HHH----HHHHHHHhCcChh----hEEECCCHH
Confidence 456888888864 688899999877643 1 234431 121 233 4667778888774 4666776 5
Q ss_pred HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEc
Q 014724 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG 258 (419)
Q Consensus 179 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~ 258 (419)
+|+..++. ++|| .+++..|.+..+.. .+...|. +++++++++ ++.+|++.+ + .++|+++++
T Consensus 86 ~al~~~~~--l~~~-~viv~~P~y~~~~~--------~~~~~G~--~i~~v~~~~-~~~~d~~~l----~-~~~~~i~l~ 146 (349)
T PRK07908 86 EGFALLAR--LRPR-RAAVVHPSFTEPEA--------ALRAAGI--PVHRVVLDP-PFRLDPAAV----P-DDADLVVIG 146 (349)
T ss_pred HHHHHHHh--cCCC-eEEEeCCCChHHHH--------HHHHcCC--EEEeeccCc-ccCcChhHh----c-cCCCEEEEc
Confidence 68887776 5775 45567776654431 2234565 555555553 377888754 2 368899999
Q ss_pred CCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCC--CCCc-EEEeCCCCcC--CCCCeeEEEEeCCCc
Q 014724 259 ASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF--KYCD-VVTTTTHKSL--RGPRGGMIFFKKDPV 331 (419)
Q Consensus 259 ~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~--~~~D-iv~~S~hK~l--~GprgG~i~~~~~~~ 331 (419)
+|+||+ ..+.++|.++|+ ++.++|+|++|. .++. +..++.. +..+ ++++|+||++ +|+|.||++.++
T Consensus 147 np~NPTG~~~~~~~l~~l~~-~~~~iIvDe~y~-~~~~-~~~~~l~~~~~~~~i~i~S~SK~~~l~GlRiG~~~~~~--- 220 (349)
T PRK07908 147 NPTNPTSVLHPAEQLLALRR-PGRILVVDEAFA-DAVP-GEPESLAGDDLPGVLVLRSLTKTWSLAGLRVGYALGAP--- 220 (349)
T ss_pred CCCCCCCCCcCHHHHHHHHh-cCCEEEEECcch-hhcc-CCccccccccCCCEEEEeecccccCCccceeeeeecCH---
Confidence 999985 568899999997 478899999963 3332 2211111 2223 6788999976 689999999876
Q ss_pred chhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeEEEEe
Q 014724 332 LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDL 411 (419)
Q Consensus 332 ~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~vd~ 411 (419)
++.+.+......... .....+++...+.......+++..+++.++++++.+.|++.|+++... +...++|+++
T Consensus 221 ---~~~~~~~~~~~~~~~---~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p-~~g~~~~~~~ 293 (349)
T PRK07908 221 ---DVLARLTRGRAHWPV---GTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAVGARVVDP-AAAPFVLVRV 293 (349)
T ss_pred ---HHHHHHHhcCCCCCc---cHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhCCcEeccC-CCceEEEEEC
Confidence 676766554322211 122233322222211112346667788888999999999888887652 4567789887
Q ss_pred C
Q 014724 412 R 412 (419)
Q Consensus 412 ~ 412 (419)
.
T Consensus 294 ~ 294 (349)
T PRK07908 294 P 294 (349)
T ss_pred C
Confidence 5
No 226
>PRK05939 hypothetical protein; Provisional
Probab=99.75 E-value=3.9e-17 Score=165.45 Aligned_cols=150 Identities=17% Similarity=0.166 Sum_probs=117.6
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccc
Q 014724 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (419)
Q Consensus 142 g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g 221 (419)
|++.++.+| +.++++.|.+. .+.++||+.|+..++.++++|||+|+++++.|+++.... ..+...|
T Consensus 45 g~p~~~~lE----~~la~leg~~~-----~v~~ssG~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~-----~~l~~~G 110 (397)
T PRK05939 45 GTPTTAALE----AKITKMEGGVG-----TVCFATGMAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLF-----GTLRGLG 110 (397)
T ss_pred CCHHHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHHHHcCCCCEEEECCCccccHHHHH-----HHHHhcC
Confidence 677788888 56788888876 378899999999999999999999999998887764221 1122345
Q ss_pred cccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcC
Q 014724 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (419)
Q Consensus 222 ~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~ 299 (419)
. ++..++. .|++++++.+.+ ++|+|++++++||+ ..|+++|+++|+++|+++++|++|..+...
T Consensus 111 ~--~v~~v~~------~d~e~l~~~l~~-~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~t~a~~~~~----- 176 (397)
T PRK05939 111 V--EVTMVDA------TDVQNVAAAIRP-NTRMVFVETIANPGTQVADLAGIGALCRERGLLYVVDNTMTSPWLF----- 176 (397)
T ss_pred C--EEEEECC------CCHHHHHHhCCC-CCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEECCccccccc-----
Confidence 4 4444432 489999999874 89999999988884 579999999999999999999998766431
Q ss_pred CCCC-CCcEEEeCCCCcCCCC
Q 014724 300 DPFK-YCDVVTTTTHKSLRGP 319 (419)
Q Consensus 300 ~~~~-~~Div~~S~hK~l~Gp 319 (419)
.+.+ ++|++++|+||++.|+
T Consensus 177 ~~~~~gaDivv~S~sK~~~g~ 197 (397)
T PRK05939 177 RPKDVGASLVINSLSKYIAGH 197 (397)
T ss_pred CccccCCEEEEecCeecccCC
Confidence 3444 8999999999999764
No 227
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.75 E-value=1.2e-16 Score=163.46 Aligned_cols=156 Identities=23% Similarity=0.241 Sum_probs=118.4
Q ss_pred hHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccc
Q 014724 144 EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY 223 (419)
Q Consensus 144 ~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~ 223 (419)
+....+| +.+++++|.+. .+.++||+.|+.+++.++++|||+|++..+.|++...... ..+...|.
T Consensus 63 p~~~~le----~~lA~l~g~~~-----al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~----~~~~~~G~- 128 (427)
T PRK05994 63 PTNAVLE----ERVAALEGGTA-----ALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFG----HAFKSFGW- 128 (427)
T ss_pred ccHHHHH----HHHHHHhCCCc-----EEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHH----HHHHhcCc-
Confidence 4455666 56888888876 3788999999999999999999999999988876532100 01122343
Q ss_pred cEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcCCC
Q 014724 224 FESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADP 301 (419)
Q Consensus 224 ~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~ 301 (419)
+++.++. .|++++++.+.+ ++|+|++++++||+ ..|+++|.++|+++|+++++|++|..+.. ..|
T Consensus 129 -~v~~vd~------~d~~~l~~ai~~-~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~a~a~~~~-----~~p 195 (427)
T PRK05994 129 -QVRWADA------DDPASFERAITP-RTKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVDNTLASPYL-----IRP 195 (427)
T ss_pred -EEEEECC------CCHHHHHHhcCc-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCcccccc-----CCc
Confidence 4444332 388999999875 79999999988874 67999999999999999999999876643 245
Q ss_pred CC-CCcEEEeCCCCcCCCCC---eeEEEE
Q 014724 302 FK-YCDVVTTTTHKSLRGPR---GGMIFF 326 (419)
Q Consensus 302 ~~-~~Div~~S~hK~l~Gpr---gG~i~~ 326 (419)
++ ++|+++.|+||++.|+. ||+++.
T Consensus 196 l~~gaDivv~S~tK~lgg~~~~~gG~v~~ 224 (427)
T PRK05994 196 IEHGADIVVHSLTKFLGGHGNSMGGIIVD 224 (427)
T ss_pred cccCCcEEEEcCccccCCCCCcEEEEEEe
Confidence 55 89999999999997764 466653
No 228
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.75 E-value=8.9e-17 Score=164.16 Aligned_cols=160 Identities=22% Similarity=0.202 Sum_probs=118.6
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccc
Q 014724 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (419)
Q Consensus 142 g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g 221 (419)
+++...+|| +.++++.|.+. .+.++||+.|+..++.++++|||+|++..+.|++.+... . ..+...|
T Consensus 56 ~~pt~~~Le----~~lA~l~g~~~-----~l~~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~--~--~~l~~~g 122 (425)
T PRK06084 56 MNPTNDVLE----QRVAALEGGVG-----ALAVASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLL--A--HTLPRIG 122 (425)
T ss_pred CCchHHHHH----HHHHHHhCCCc-----eeEehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHH--H--Hhcccce
Confidence 334456676 57888888665 367899999999999999999999999988877543210 0 0111123
Q ss_pred cccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcC
Q 014724 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (419)
Q Consensus 222 ~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~ 299 (419)
. ++..++ ..|++++++.+++ ++|+|++++|+||+ ..|+++|.++|+++|++|++|++|..+.. .
T Consensus 123 i--~v~~~d------~~d~e~le~ai~~-~tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVvD~a~a~~~~-----~ 188 (425)
T PRK06084 123 I--ETRFAA------HDDIAALEALIDE-RTKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIVDNTVATPVL-----C 188 (425)
T ss_pred e--EEEEEC------CCCHHHHHHHhcc-CCcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence 2 333322 2589999999875 78999999988884 67999999999999999999999876543 2
Q ss_pred CCCC-CCcEEEeCCCCcCCCCC---eeEEEEeC
Q 014724 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKK 328 (419)
Q Consensus 300 ~~~~-~~Div~~S~hK~l~Gpr---gG~i~~~~ 328 (419)
.|++ ++|++++|+||++.|+. ||+++.+.
T Consensus 189 ~p~~~gaDivv~S~tK~l~G~g~~~gG~v~~~~ 221 (425)
T PRK06084 189 RPFEHGADIVVHSLTKYIGGHGTSIGGIVVDSG 221 (425)
T ss_pred ChhhcCCCEEEECchhcccccccceeEEEEeCC
Confidence 4455 79999999999997653 57666543
No 229
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.74 E-value=1.8e-16 Score=157.31 Aligned_cols=259 Identities=17% Similarity=0.151 Sum_probs=165.5
Q ss_pred hhcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcC---CCCCCCceeEecCC
Q 014724 102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN---LDENKWGVNVQPLS 176 (419)
Q Consensus 102 ~~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g---~~~~~~~v~V~~~s 176 (419)
.+.|+|..++|. +|+.+++++.+.+.......|+.. | ..++++ .++++++ ++++ +|++++
T Consensus 19 ~~~i~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~Y~~~----~---~~~Lr~----aia~~~~~~~~~~~----~i~it~ 83 (335)
T PRK14808 19 RDRTYLALNENPFPFPEDLVDEVFRRLNSDTLRIYYDS----P---DEELIE----KILSYLDTDFLSKN----NVSVGN 83 (335)
T ss_pred CceeEecCCCCCCCCCHHHHHHHHHHhhhhhhhcCCCC----C---hHHHHH----HHHHHhCCCCCCcc----eEEEcC
Confidence 456888888865 589999998876543211113321 2 234553 4555555 5553 477788
Q ss_pred hH-HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEE
Q 014724 177 GS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLI 255 (419)
Q Consensus 177 Gt-~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklI 255 (419)
|+ +++..++.++ |.|++.+|+|..+.. .+...|. +++.++.++ ++.+|.+. + .++++|
T Consensus 84 Ga~~~i~~~~~~~----d~v~v~~P~y~~~~~--------~~~~~g~--~~~~v~~~~-~~~~~~~~----~--~~~~~i 142 (335)
T PRK14808 84 GADEIIYVMMLMF----DRSVFFPPTYSCYRI--------FAKAVGA--KFLEVPLTK-DLRIPEVN----V--GEGDVV 142 (335)
T ss_pred CHHHHHHHHHHHh----CcEEECCCCHHHHHH--------HHHHcCC--eEEEecCCC-cCCCChhH----c--cCCCEE
Confidence 75 6898888877 789999998766542 2345566 445555543 45555332 2 246899
Q ss_pred EEcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC-C-CcEEEeCCCCcC--CCCCeeEEEEeCC
Q 014724 256 IAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-Y-CDVVTTTTHKSL--RGPRGGMIFFKKD 329 (419)
Q Consensus 256 i~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~-~-~Div~~S~hK~l--~GprgG~i~~~~~ 329 (419)
++++|+||+ ..+.+++.+++ +++++||+|+++ ..+... .....++ . .-++++|++|+| +|.|.||+++++
T Consensus 143 ~i~nP~NPTG~~~s~~~l~~l~-~~~~~ii~DE~Y-~~f~~~-~~~~~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~~- 218 (335)
T PRK14808 143 FIPNPNNPTGHVFEREEIERIL-KTGAFVALDEAY-YEFHGE-SYVDLLKKYENLAVIRTFSKAFSLAAQRIGYVVSSE- 218 (335)
T ss_pred EEeCCCCCCCCCcCHHHHHHHH-hcCCEEEEECch-hhhcCC-chHHHHHhCCCEEEEEechhhccCcccceEEEEeCH-
Confidence 999999995 56788999998 589999999995 343211 1111122 2 237789999987 589999999987
Q ss_pred CcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeEEE
Q 014724 330 PVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLV 409 (419)
Q Consensus 330 ~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~v 409 (419)
++.+.+.....+. +.+.... .+...++... +.+++..+++.++++++.+.|++.|+++.++ +..++|+
T Consensus 219 -----~~~~~l~~~~~~~--~~~~~~q-~a~~~~l~~~--~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~--~g~f~~~ 286 (335)
T PRK14808 219 -----KFIDAYNRVRLPF--NVSYVSQ-MFAKVALDHR--EIFEERTKFIVEERERMKSALREMGYRITDS--RGNFVFI 286 (335)
T ss_pred -----HHHHHHHHhcCCC--CCCHHHH-HHHHHHHhCH--HHHHHHHHHHHHHHHHHHHHHHHCCCEECCC--CCeEEEE
Confidence 6777776544232 1222222 2223344321 2345666777888889999999999887653 4567788
Q ss_pred EeC
Q 014724 410 DLR 412 (419)
Q Consensus 410 d~~ 412 (419)
.+.
T Consensus 287 ~l~ 289 (335)
T PRK14808 287 FME 289 (335)
T ss_pred eCC
Confidence 875
No 230
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.74 E-value=1.2e-16 Score=163.42 Aligned_cols=160 Identities=22% Similarity=0.176 Sum_probs=119.6
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccc
Q 014724 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (419)
Q Consensus 142 g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g 221 (419)
+++....|| +.++++.|.+. .+.++||+.|+..++.++++|||+|+++++.|++.+.... ..+...|
T Consensus 62 ~~p~~~~Le----~~lA~leg~~~-----al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~----~~~~~~G 128 (431)
T PRK08248 62 MNPTTDVFE----KRIAALEGGIG-----ALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFA----HTLPKLG 128 (431)
T ss_pred CCchHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHH----HHHHhCC
Confidence 445566777 56788888765 3788999999999999999999999999988766432110 0112344
Q ss_pred cccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcC
Q 014724 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (419)
Q Consensus 222 ~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~ 299 (419)
. +++.++. .|++++++.+++ ++++|++++++||+ ..|+++|.++|+++|+++|+|+++..+.. .
T Consensus 129 v--~v~~vd~------~d~e~l~~ai~~-~tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD~t~a~~~~-----~ 194 (431)
T PRK08248 129 I--TVKFVDP------SDPENFEAAITD-KTKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVDNTFASPYL-----L 194 (431)
T ss_pred E--EEEEECC------CCHHHHHHhcCC-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEeCCCCcccc-----C
Confidence 4 5555432 489999999875 78999999888884 67999999999999999999999754432 3
Q ss_pred CCCC-CCcEEEeCCCCcCCCCC---eeEEEEeC
Q 014724 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKK 328 (419)
Q Consensus 300 ~~~~-~~Div~~S~hK~l~Gpr---gG~i~~~~ 328 (419)
.|++ ++|+++.|+||+++|+. ||+++.+.
T Consensus 195 ~pl~~gaDivv~S~tK~lgg~g~~~Gg~v~~~~ 227 (431)
T PRK08248 195 RPIEHGADIVVHSATKFIGGHGTSIGGVIVDSG 227 (431)
T ss_pred ChhHcCCCEEEEcCccccCCCCCceEEEEEeCC
Confidence 4455 89999999999997763 45555443
No 231
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.74 E-value=1.6e-16 Score=163.64 Aligned_cols=234 Identities=18% Similarity=0.206 Sum_probs=151.3
Q ss_pred HHHHHHHHHcCCCCCCCceeEecCC-hHHHHHHHHHHc-cCCCCEEEEeCCCCCccccCccccccccccccccccEEEec
Q 014724 152 LCQKRALAAFNLDENKWGVNVQPLS-GSPANFEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPY 229 (419)
Q Consensus 152 ~~~~~la~~~g~~~~~~~v~V~~~s-Gt~A~~~~~~al-l~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~ 229 (419)
+.++++++++|++.+ ++.+++ |+.++.+++.++ .++||+|+++++.|+++..... ......|. +++.+
T Consensus 116 e~~~~la~l~g~~~~----~v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~----~~~~~~G~--~~~~v 185 (447)
T PRK00451 116 EYQTMICELTGMDVA----NASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEYREVLK----TYLKGQGI--EVVEV 185 (447)
T ss_pred HHHHHHHHHhCCCcc----eEEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHH----HHHHhCCc--EEEEe
Confidence 445788999999874 354555 567888888887 4899999999988866542110 00112344 44555
Q ss_pred ccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC-CCcCChHHHHHHHHHhCCEEEE--eccccccccccCCcCCCCC-CC
Q 014724 230 RLDESTGLVDYDMLEKTAILFRPKLIIAGASAY-PRDFDYPRMRQIADAVGALLMM--DMAHISGLVAASVVADPFK-YC 305 (419)
Q Consensus 230 ~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~-p~~~dl~~I~~ia~~~ga~liv--D~ah~~Gl~~~g~~~~~~~-~~ 305 (419)
++++ + .+|++++++.+.+ ++++|++++|++ +...|+++|+++|+++|+++++ |.. ..|.. ..+-+ ++
T Consensus 186 ~~~~-~-~~d~~~l~~~i~~-~t~~v~l~~pn~tG~v~~l~~I~~~a~~~~~~~iv~~d~~-~~g~~-----~~~~~~~~ 256 (447)
T PRK00451 186 PYED-G-VTDLEALEAAVDD-DTAAVVVQYPNFFGVIEDLEEIAEIAHAGGALFIVGVDPV-SLGLL-----KPPGEYGA 256 (447)
T ss_pred cCCC-C-CCCHHHHHHhcCC-CeEEEEEECCCCCCeeCCHHHHHHHHHHCCCEEEEEcChH-HhccC-----CCcccCCC
Confidence 5553 4 8999999999864 789988887743 3567999999999999999998 543 33322 22222 78
Q ss_pred cEEEeCCCCc-----CCCCCeeEEEEeCCCcchhhHHHHhhhc--------------c---------cCCCCCCCh---H
Q 014724 306 DVVTTTTHKS-----LRGPRGGMIFFKKDPVLGVELESAINNA--------------V---------FPGLQGGPH---N 354 (419)
Q Consensus 306 Div~~S~hK~-----l~GprgG~i~~~~~~~~~~~l~~~i~~~--------------~---------~~~~~g~p~---~ 354 (419)
|++++|.||+ ++||+.|+++.+++ +.+.+... . .....+.+. .
T Consensus 257 D~~~~s~~k~~~~~~~~Gpg~G~l~~~~~------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (447)
T PRK00451 257 DIVVGEGQPLGIPLSFGGPYLGFFATRKK------LVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTN 330 (447)
T ss_pred CEEEECCCcCCCCCCCCCCCchHHHhhHH------HHhhCCCCEeeeecccCCCeeeEeecccccccccccccccccccc
Confidence 9999988885 68898899988773 43332100 0 000011111 1
Q ss_pred HHHH--HHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEEecCCCcceeEEEEe
Q 014724 355 HTIG--GLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLVLVDL 411 (419)
Q Consensus 355 ~~ia--ala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~~~~t~~hlv~vd~ 411 (419)
..+. +.+.+++.+...++++..+++.++++++.+.|++. |+++.. +...+.+.+++
T Consensus 331 ~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~~~~~~~v~~ 389 (447)
T PRK00451 331 QALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIGGVELFD-GPFFNEFVVRL 389 (447)
T ss_pred HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcCCEEecC-CCeEEEEEEec
Confidence 1111 22224454554567888999999999999999997 688763 33233344564
No 232
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.74 E-value=2.9e-16 Score=172.32 Aligned_cols=241 Identities=19% Similarity=0.171 Sum_probs=162.5
Q ss_pred HHHHHHHHHHHHcCCCCCCCceeEecCChH---HHHHHHHHHccCC-CC----EEEEeCCCCCccccCcccccccccccc
Q 014724 149 LETLCQKRALAAFNLDENKWGVNVQPLSGS---PANFEVYTAILKP-HD----RIMGLDLPHGGHLSHGFMTPKRRVSGT 220 (419)
Q Consensus 149 lE~~~~~~la~~~g~~~~~~~v~V~~~sGt---~A~~~~~~all~p-GD----~Vl~~~~~~~g~~s~~~~~~~~~i~~~ 220 (419)
+-..+++++++++|.+. +.+++++|+ .|++.++.++.++ || +|+++..+|+++... ..+.
T Consensus 569 ~~~~~r~~la~i~g~~~----v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~--------a~~~ 636 (993)
T PLN02414 569 MFEDLGDLLCEITGFDS----FSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPAS--------AAMC 636 (993)
T ss_pred HHHHHHHHHHHHhCCCe----EEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHH--------HHHC
Confidence 33467899999999955 556666664 3888888888876 88 899999999887632 2345
Q ss_pred ccccEEEecccCCCCCCCCHHHHHHHhhh--cCCeEEEEcCCCCC--CcCChHHHHHHHHHhCCEEEEeccccccccccC
Q 014724 221 SIYFESMPYRLDESTGLVDYDMLEKTAIL--FRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAAS 296 (419)
Q Consensus 221 g~~~~~v~~~~~~~~~~iD~d~Le~~l~~--~~pklIi~~~s~~p--~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g 296 (419)
|. +++.++++ ++|.+|+++|++++++ .++++|++.+++|- ...|+++|+++||++|+++++|.+|..++...
T Consensus 637 G~--~vv~v~~d-~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~~~l- 712 (993)
T PLN02414 637 GM--KIVVVGTD-AKGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQVGL- 712 (993)
T ss_pred CC--EEEEeccC-CCCCcCHHHHHHHHhccCCCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhccCc-
Confidence 55 44444455 4789999999999975 25688888776653 45679999999999999999999998776421
Q ss_pred CcCCCCC-CCcEEEeCCCCcCCCCC------eeEEEEeCCCcchhhHHHHhhhc----------cc-CCCCCC----ChH
Q 014724 297 VVADPFK-YCDVVTTTTHKSLRGPR------GGMIFFKKDPVLGVELESAINNA----------VF-PGLQGG----PHN 354 (419)
Q Consensus 297 ~~~~~~~-~~Div~~S~hK~l~Gpr------gG~i~~~~~~~~~~~l~~~i~~~----------~~-~~~~g~----p~~ 354 (419)
..|.+ ++|++++|.||+|.||. .|++.+++. +...+-.. .+ ....|+ +.+
T Consensus 713 --~~p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~------L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~~g 784 (993)
T PLN02414 713 --TSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH------LAPFLPSHPVVPTGGIPRPEKTQPLGTISAAPWG 784 (993)
T ss_pred --CCccccCCCEEEecCCccCCcCcccCCCCeeeEEEchh------hcccCCCCccccCCCcccccCCCCcCCccchhhh
Confidence 23334 89999999999987665 388877763 32222110 00 011122 222
Q ss_pred HHHHH-HHHH-HHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCC---CcceeEEEEeCCc
Q 014724 355 HTIGG-LAVC-LKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGG---SDNHLVLVDLRPM 414 (419)
Q Consensus 355 ~~iaa-la~a-l~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~---t~~hlv~vd~~~~ 414 (419)
+...+ .+.+ +..+..+++++..++...|++|+++.|.+ ++++...+ .--|-..++++++
T Consensus 785 ~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~-~~~~~~~~~~~~~~hEfv~~~~~l 848 (993)
T PLN02414 785 SALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEG-HYPVLFRGKNGTCAHEFIIDLRPF 848 (993)
T ss_pred hHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHh-hCCccccCCCCCeeeeEEEecccc
Confidence 22211 1222 33444455677788899999999999987 55544322 3356677888743
No 233
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.74 E-value=3e-16 Score=151.43 Aligned_cols=270 Identities=17% Similarity=0.159 Sum_probs=169.9
Q ss_pred ccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHH
Q 014724 109 ASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYT 186 (419)
Q Consensus 109 ~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~ 186 (419)
.|.|. .+|+++++|...-. .. ..-|+..+.+..+| ++++++||... .+++.|||.||..++.
T Consensus 5 ~SDn~~g~~~~m~eam~~a~~-~~------~~~YG~D~~~~~~e----~~~ae~~g~~a-----~~Fv~sGT~aN~lal~ 68 (342)
T COG2008 5 RSDNVAGPTPEMREALAAANA-VG------DDVYGEDPTTNALE----QRIAELFGKEA-----ALFVPSGTQANQLALA 68 (342)
T ss_pred ccCccCCCCHHHHHHHHhccc-cC------CCCCCCCHHHHHHH----HHHHHHhCCce-----EEEecCccHHHHHHHH
Confidence 35555 47999999976431 11 12355567677777 67889999833 3788899999999999
Q ss_pred HccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCC-CCCCCCHHHHHHHhhhc------CCeEEEEcC
Q 014724 187 AILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILF------RPKLIIAGA 259 (419)
Q Consensus 187 all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~-~~~~iD~d~Le~~l~~~------~pklIi~~~ 259 (419)
+.++||+.|++..-.|--..-. ..+...+. ..++...+ .+|.+++|+++..++.. +|++++.+.
T Consensus 69 ~~~~~~~~vi~~~~aHi~~~E~------Ga~~~~~~---~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~ 139 (342)
T COG2008 69 AHCQPGESVICHETAHIYTDEC------GAPEFFGG---GQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENT 139 (342)
T ss_pred HhcCCCCeEEEeccccceeccc------CcHHHHcC---CceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeec
Confidence 9999999999987654222111 12222221 12222333 57899999999987631 244555544
Q ss_pred CC-CCCcC---ChHHHHHHHHHhCCEEEEecccccc-ccccCCcCCCCC-CCcEEEeCCCCcCCCCCeeEEEEeCCCcch
Q 014724 260 SA-YPRDF---DYPRMRQIADAVGALLMMDMAHISG-LVAASVVADPFK-YCDVVTTTTHKSLRGPRGGMIFFKKDPVLG 333 (419)
Q Consensus 260 s~-~p~~~---dl~~I~~ia~~~ga~livD~ah~~G-l~~~g~~~~~~~-~~Div~~S~hK~l~GprgG~i~~~~~~~~~ 333 (419)
.+ .+++. .+++|.++||++|+.|+.|.|-..- +++.+.....+. ++|+++.+++|.+..|-+.+++++.
T Consensus 140 ~te~GtVy~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg~~~~~~~~~~D~v~~~~tK~g~~~~gAiv~gn~----- 214 (342)
T COG2008 140 ATEGGTVYPLDELEAISAVCKEHGLPLHMDGARLANALVALGVALKTIKSYVDSVSFCLTKGGGAPVGAIVFGNR----- 214 (342)
T ss_pred cCCCceecCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcCCCHHHHHhhCCEEEEecccCCcceeeeEEEcCH-----
Confidence 33 35544 4678888999999999999996433 333331111122 8999999999998777778888887
Q ss_pred hhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHH-HHHHHHHHHHHHHHHHHHHh-CCcEEecCCCcceeEEEEe
Q 014724 334 VELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF-KVYQNKVVSNCRALASRLVE-LGYKLVSGGSDNHLVLVDL 411 (419)
Q Consensus 334 ~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~-~~~~~~v~~n~~~l~~~L~~-~G~~v~~~~t~~hlv~vd~ 411 (419)
++.++.+.......++-.....+++ +....++.+. .....+-.+.+++|++.|.+ .|+++... +++|+|++++
T Consensus 215 -~~~~~a~~~rK~~Ggl~~k~r~laA---~~~~~l~~~~~~~~~~Han~mA~~La~~~~~~~G~~~~~~-~~tN~vf~~l 289 (342)
T COG2008 215 -DFAKRARRWRKRAGGLMRKARFLAA---QGLYALEDDVWRLAADHANAMAARLAEGLEAKPGVKLAFP-VETNMVFVRL 289 (342)
T ss_pred -HHHHHHHHHHHHhcccHhhhhHHHH---HHHHHHhccHHHHHHHHHHHHHHHHHHhhhhcCCceeccC-CcccEEEEEC
Confidence 5666554432211111111111222 2222222232 22223333348999999995 59999875 8999999998
Q ss_pred CC
Q 014724 412 RP 413 (419)
Q Consensus 412 ~~ 413 (419)
..
T Consensus 290 ~~ 291 (342)
T COG2008 290 PE 291 (342)
T ss_pred Ch
Confidence 75
No 234
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.74 E-value=1.4e-16 Score=162.63 Aligned_cols=159 Identities=21% Similarity=0.171 Sum_probs=118.7
Q ss_pred hhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCcccccccccccccc
Q 014724 143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 222 (419)
Q Consensus 143 ~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~ 222 (419)
++...++| +++++++|.+. .++++||+.|+..++.+++++||+|++.++.|++.+.... ..+...|.
T Consensus 56 ~p~~~~le----~~lA~l~g~~~-----~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~----~~~~~~G~ 122 (418)
T TIGR01326 56 NPTTDVLE----QRIAALEGGVA-----ALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFK----HTLKRLGI 122 (418)
T ss_pred ChhHHHHH----HHHHHHhCCCe-----EEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHH----HHHHHcCc
Confidence 34455666 67888999754 3788999999999999999999999999988866432110 01123444
Q ss_pred ccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcCC
Q 014724 223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD 300 (419)
Q Consensus 223 ~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~ 300 (419)
+++.++. .|++++++.+.+ ++++|++++++||+ ..|+++|+++|+++|+++++|+++..+.. ..
T Consensus 123 --~v~~v~~------~d~~~l~~~l~~-~t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD~t~~~~~~-----~~ 188 (418)
T TIGR01326 123 --EVRFVDP------DDPEEFEKAIDE-NTKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVDNTFATPYL-----CR 188 (418)
T ss_pred --EEEEECC------CCHHHHHHhcCc-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCchhhc-----CC
Confidence 4444432 289999999874 78999999999884 57999999999999999999999865532 23
Q ss_pred CCC-CCcEEEeCCCCcCCC--CCeeEEEEeC
Q 014724 301 PFK-YCDVVTTTTHKSLRG--PRGGMIFFKK 328 (419)
Q Consensus 301 ~~~-~~Div~~S~hK~l~G--prgG~i~~~~ 328 (419)
+++ ++|++++|+||++.| .+.|+++.++
T Consensus 189 ~l~~g~Divv~S~sK~l~g~G~~lGg~v~~~ 219 (418)
T TIGR01326 189 PIDHGADIVVHSATKYIGGHGTAIGGVIVDG 219 (418)
T ss_pred chhcCCeEEEECccccccCCccceEEEEEec
Confidence 454 799999999999854 4556666644
No 235
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.74 E-value=1.7e-16 Score=162.28 Aligned_cols=160 Identities=21% Similarity=0.181 Sum_probs=118.6
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccc
Q 014724 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (419)
Q Consensus 142 g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g 221 (419)
+++..+.|| +.+++++|.+. .+.++||+.|+.+++.++++|||+|++.+..|++...... ..+...|
T Consensus 67 ~~p~~~~Le----~~lA~l~g~~~-----av~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~----~~l~~~G 133 (436)
T PRK07812 67 MNPTQDVVE----QRIAALEGGVA-----ALLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFH----YTLPKLG 133 (436)
T ss_pred CCchHHHHH----HHHHHHhCCCe-----EEEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHH----HHhhcCe
Confidence 345566777 57888999876 2788999999999999999999999999877766431000 0111223
Q ss_pred cccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CcCChHHHHHHHHHhCCEEEEeccccccccccCCcC
Q 014724 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (419)
Q Consensus 222 ~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p--~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~ 299 (419)
+++..++ + ..|++++++.+++ ++|+|++.+++|| ...|+++|+++|+++|+++++|++|..+.. .
T Consensus 134 --i~v~~vd-d----~~d~e~l~~ai~~-~tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD~t~a~~~~-----~ 200 (436)
T PRK07812 134 --IEVSFVE-D----PDDLDAWRAAVRP-NTKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVDNTIATPYL-----I 200 (436)
T ss_pred --EEEEEEC-C----CCCHHHHHHhCCC-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence 3444432 2 1389999998874 7899999988887 467999999999999999999999876643 3
Q ss_pred CCCC-CCcEEEeCCCCcCCCCC---eeEEEEe
Q 014724 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFK 327 (419)
Q Consensus 300 ~~~~-~~Div~~S~hK~l~Gpr---gG~i~~~ 327 (419)
.+++ ++|+++.|+||++.|+. +|.++.+
T Consensus 201 ~pl~~GaDivv~S~tK~lgg~G~~i~G~vv~~ 232 (436)
T PRK07812 201 RPLEHGADIVVHSATKYLGGHGTAIAGVIVDG 232 (436)
T ss_pred CchhcCCCEEEEecccccCCCCCeEEEEEEcC
Confidence 4555 89999999999997664 2545433
No 236
>PRK07049 methionine gamma-lyase; Validated
Probab=99.74 E-value=1.9e-16 Score=161.82 Aligned_cols=216 Identities=17% Similarity=0.134 Sum_probs=146.9
Q ss_pred hHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccc
Q 014724 144 EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY 223 (419)
Q Consensus 144 ~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~ 223 (419)
+....+| +.++++.|.+. .++++||+.|+..++.++++|||+|++++|.|+++..... ..+...|+
T Consensus 83 Pt~~~Le----~~lA~leg~~~-----~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~----~~l~~~Gi- 148 (427)
T PRK07049 83 PNSEIVE----DRLAVYEGAES-----AALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLA----KTFRNFGV- 148 (427)
T ss_pred cCHHHHH----HHHHHHhCCCc-----EEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHH----HHHHhcCc-
Confidence 4345666 56788888664 3778899999999999999999999999998887632100 00122343
Q ss_pred cEEEecccCCCCCCCCHHHHHHHhh----hcCCeEEEEcCCCCCC--cCChHHHHHHHHH------hCCEEEEecccccc
Q 014724 224 FESMPYRLDESTGLVDYDMLEKTAI----LFRPKLIIAGASAYPR--DFDYPRMRQIADA------VGALLMMDMAHISG 291 (419)
Q Consensus 224 ~~~v~~~~~~~~~~iD~d~Le~~l~----~~~pklIi~~~s~~p~--~~dl~~I~~ia~~------~ga~livD~ah~~G 291 (419)
+.+.+. + ..|++.+++.+. +.++|+|++++|+||+ ..|+++|.++|++ +++++++|++....
T Consensus 149 -~~v~~~-~----~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~ 222 (427)
T PRK07049 149 -GAVGFA-D----GLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGP 222 (427)
T ss_pred -EEEEEe-C----CCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCcccc
Confidence 444442 1 257788877664 2468999999999995 5799999999988 89999999984322
Q ss_pred ccccCCcCCCCC-CCcEEEeCCCCcCCC---CCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHh
Q 014724 292 LVAASVVADPFK-YCDVVTTTTHKSLRG---PRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHA 367 (419)
Q Consensus 292 l~~~g~~~~~~~-~~Div~~S~hK~l~G---prgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~ 367 (419)
. ...|++ ++|+++.|++|++.| .|+|+++.++ ++.+.+.....+. .+.... ..+.. +++.+
T Consensus 223 -~----~~~pl~~g~divv~S~SK~~gG~~glr~G~vv~~~------~l~~~l~~~~~~~-g~~ls~--~~a~l-~~r~L 287 (427)
T PRK07049 223 -V----FQKPLEHGADLSVYSLTKYVGGHSDLVAGAVLGRK------ALIRQVRALRSAI-GTQLDP--HSCWM-LGRSL 287 (427)
T ss_pred -c----cCCccccCCCEEEEcCceeecCCCCcEEEEEECCH------HHHHHHHHHHHhc-CCCCCH--HHHHH-HHcCC
Confidence 2 123455 789999999999864 5889999876 5666665432221 111111 11111 22222
Q ss_pred cChHHHHHHHHHHHHHHHHHHHHHhC-CcE
Q 014724 368 QSPEFKVYQNKVVSNCRALASRLVEL-GYK 396 (419)
Q Consensus 368 ~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~ 396 (419)
..+..+.+++.+|++.+++.|++. ++.
T Consensus 288 --~tl~~R~~~~~~~a~~la~~L~~~p~V~ 315 (427)
T PRK07049 288 --ETLVLRMERANRNARAVAEFLRDHPKVE 315 (427)
T ss_pred --ChHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 235666788899999999999986 553
No 237
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.74 E-value=8.5e-17 Score=161.89 Aligned_cols=210 Identities=17% Similarity=0.117 Sum_probs=145.0
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccc
Q 014724 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (419)
Q Consensus 142 g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g 221 (419)
|++.+++|| ++++++.|.+. .+.++||+.|+.+++.++++|||+|+++...|++.+.... ..+...|
T Consensus 62 ~~P~~~~lE----~~la~leg~~~-----av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~----~~~~~~G 128 (384)
T PRK06434 62 GNPTVQAFE----EKYAVLENAEH-----ALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFN----KVLKTLG 128 (384)
T ss_pred CChhHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHH----HHHHhcC
Confidence 667788888 56788888876 3788999999999999999999999998776766542110 1122344
Q ss_pred cccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcC
Q 014724 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (419)
Q Consensus 222 ~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~ 299 (419)
+ ++..+++++. ..++ +...++|+|++..+.||+ ..|+++|+++|+++| +++|+++..+.. .
T Consensus 129 i--~v~fvd~~~~-~~~~-------l~~~~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD~t~~s~~~-----~ 191 (384)
T PRK06434 129 I--HVDYIDTDRL-NSLD-------FDPSNYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVDATFASPYN-----Q 191 (384)
T ss_pred c--EEEEECCCCh-hhee-------ecCCCeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEECCCCCccc-----C
Confidence 4 4555544321 1122 222368999999888874 679999999999998 467999754422 3
Q ss_pred CCCC-CCcEEEeCCCCcCCCCC---eeEEEEeCCCcchhhHHHHhhhcc-cCCCCCCChHHHHHHHHHHHHHhcChHHHH
Q 014724 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAV-FPGLQGGPHNHTIGGLAVCLKHAQSPEFKV 374 (419)
Q Consensus 300 ~~~~-~~Div~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~-~~~~~g~p~~~~iaala~al~~~~~~~~~~ 374 (419)
.|++ ++|++++|.||++.|+. ||+|+++++ ++.+++.... ..+...+ ...|+ ..+..+. .++.
T Consensus 192 ~pl~~gaDivv~S~tK~i~G~~d~~gG~vv~~~~-----~~~~~~~~~~~~~G~~~~---~~~A~--l~~~gL~--tL~~ 259 (384)
T PRK06434 192 NPLDLGADVVIHSATKYISGHSDVVMGVAGTNNK-----SIFNNLVERRKTLGSNPD---PIQAY--LALRGLK--TLGL 259 (384)
T ss_pred CchhcCCCEEEeecccccCCCCCceEEEEecCcH-----HHHHHHHHHHHhcCCCCC---HHHHH--HHHhCCC--cHHH
Confidence 4566 89999999999998865 788888764 5655554321 1121111 11222 2344443 4678
Q ss_pred HHHHHHHHHHHHHHHHHhC
Q 014724 375 YQNKVVSNCRALASRLVEL 393 (419)
Q Consensus 375 ~~~~v~~n~~~l~~~L~~~ 393 (419)
+.+++.+|+..+++.|+++
T Consensus 260 R~~r~~~~a~~~a~~L~~~ 278 (384)
T PRK06434 260 RMEKHNKNGMELARFLRDS 278 (384)
T ss_pred HHHHHHHHHHHHHHHHHcC
Confidence 8899999999999999986
No 238
>PRK15029 arginine decarboxylase; Provisional
Probab=99.73 E-value=7.1e-17 Score=172.71 Aligned_cols=223 Identities=15% Similarity=0.107 Sum_probs=159.8
Q ss_pred HHHHHHHHcCCCCCCCceeEecCChH-HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEeccc
Q 014724 153 CQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 231 (419)
Q Consensus 153 ~~~~la~~~g~~~~~~~v~V~~~sGt-~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~ 231 (419)
+++.++++||.+.. .+.++|| .+|.+++.++++|||+|++...+|-+.+ | .+.++|+....+.-..
T Consensus 210 Aq~~aA~~fgA~~t-----~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~-~-------al~L~ga~Pvyl~P~~ 276 (755)
T PRK15029 210 SEKYAARVFGADRS-----WSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIE-Q-------GLILTGAKPVYMVPSR 276 (755)
T ss_pred HHHHHHHHhCCCcE-----EEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHH-H-------HHHHcCCeEEEecccc
Confidence 45788999999974 4456665 5999999999999999999998887765 2 2456666433332112
Q ss_pred CCCC---CCCC-----HHHHHHHhhhc---------CCeEEEEcCCCC-CCcCChHHHHHHHHHhCCEEEEecccccccc
Q 014724 232 DEST---GLVD-----YDMLEKTAILF---------RPKLIIAGASAY-PRDFDYPRMRQIADAVGALLMMDMAHISGLV 293 (419)
Q Consensus 232 ~~~~---~~iD-----~d~Le~~l~~~---------~pklIi~~~s~~-p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~ 293 (419)
+ +. +.|+ ++.++++++++ +|+++++.+|+| +...|+++|+++|+++|++|++|+||++-+.
T Consensus 277 ~-~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~ 355 (755)
T PRK15029 277 N-RYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYAR 355 (755)
T ss_pred c-ccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCCcceeeCHHHHHHHHHhcCCeEEEECccccccc
Confidence 1 22 2455 89999998653 233777766665 6788999999999999999999999987666
Q ss_pred ccCCcC--CCC-------CCCc-EEEeCCCCcCCCCC-eeEEEEeCC--CcchhhHHHHhhhcccCCCCCCChHHHHHHH
Q 014724 294 AASVVA--DPF-------KYCD-VVTTTTHKSLRGPR-GGMIFFKKD--PVLGVELESAINNAVFPGLQGGPHNHTIGGL 360 (419)
Q Consensus 294 ~~g~~~--~~~-------~~~D-iv~~S~hK~l~Gpr-gG~i~~~~~--~~~~~~l~~~i~~~~~~~~~g~p~~~~iaal 360 (419)
+...++ +.+ .++| +++.|+||++++.. +++|..+.. .+ + .++++.+......++|+...+|++
T Consensus 356 F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~~~~i---d-~~r~~~~l~~~qSTSPSY~LmASL 431 (755)
T PRK15029 356 FNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAI---N-FSRFNQAYMMHATTSPLYAICASN 431 (755)
T ss_pred cCccccccccccccccccCCCceEEEEchhhcccchhhhhhheeCCCcccc---C-HHHHHHHHHHHcCCCcHHHHHHHH
Confidence 555444 344 3788 99999999998884 577777543 11 1 234554433333468999999999
Q ss_pred HHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC
Q 014724 361 AVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL 393 (419)
Q Consensus 361 a~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~ 393 (419)
-.|...+..+..++..++..+.+..|++.|.+.
T Consensus 432 D~ar~~m~~~~G~~l~~~~i~~~~~~r~~l~~~ 464 (755)
T PRK15029 432 DVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARL 464 (755)
T ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhc
Confidence 888877653345667777888888899888764
No 239
>PLN02880 tyrosine decarboxylase
Probab=99.73 E-value=3.4e-16 Score=162.35 Aligned_cols=253 Identities=15% Similarity=0.127 Sum_probs=161.1
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCC----ceeEecCChHHHHHHHHHHccC-----C-----CC-EEEEeCCCCCccccCc
Q 014724 145 YIDELETLCQKRALAAFNLDENKW----GVNVQPLSGSPANFEVYTAILK-----P-----HD-RIMGLDLPHGGHLSHG 209 (419)
Q Consensus 145 ~~~~lE~~~~~~la~~~g~~~~~~----~v~V~~~sGt~A~~~~~~all~-----p-----GD-~Vl~~~~~~~g~~s~~ 209 (419)
...++|+.+.+|+++++|.+...| +.-+++++||+||+.++.+.-+ . .. .|++.+-. |++..
T Consensus 119 ~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~a---H~Sv~ 195 (490)
T PLN02880 119 AATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQT---HSALQ 195 (490)
T ss_pred ccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCc---hHHHH
Confidence 346899999999999999986421 1235667789999877755421 0 12 34444443 43322
Q ss_pred cccccccccccccc---cEEEecccCC-CCCCCCHHHHHHHhhhc-----CCeEEEE--cCCCCCCcCChHHHHHHHHHh
Q 014724 210 FMTPKRRVSGTSIY---FESMPYRLDE-STGLVDYDMLEKTAILF-----RPKLIIA--GASAYPRDFDYPRMRQIADAV 278 (419)
Q Consensus 210 ~~~~~~~i~~~g~~---~~~v~~~~~~-~~~~iD~d~Le~~l~~~-----~pklIi~--~~s~~p~~~dl~~I~~ia~~~ 278 (419)
|.+...|++ +..++ +|+ +++.+|+++|++.+++. .|-+|+. +.++++...|+++|+++|++|
T Consensus 196 -----Kaa~~lGlg~~~v~~Vp--~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~ 268 (490)
T PLN02880 196 -----KACQIAGIHPENCRLLK--TDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSN 268 (490)
T ss_pred -----HHHHHcCCCHHHEEEee--cCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHc
Confidence 345667765 34444 543 35789999999999653 2555554 445566778999999999999
Q ss_pred CCEEEEeccccccccccCCcCCCC---CCCcEEEeCCCCcCCCCCe-eEEEEeCCCcchhhHHHHhhhc---ccC-----
Q 014724 279 GALLMMDMAHISGLVAASVVADPF---KYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNA---VFP----- 346 (419)
Q Consensus 279 ga~livD~ah~~Gl~~~g~~~~~~---~~~Div~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~~~---~~~----- 346 (419)
|+|++||+||+.+......+...+ +++|.++.++||++..|.+ |++++++.. .+...+... ...
T Consensus 269 ~iwlHVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~~~g~llvr~~~----~l~~~~~~~~~Yl~~~~~~~ 344 (490)
T PLN02880 269 GMWFHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFLTNFDCSLLWVKDRN----ALIQSLSTNPEFLKNKASQA 344 (490)
T ss_pred CCEEEEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcCCCccEEEEEEeCHH----HHHHHHccCHHHhcCccccc
Confidence 999999999865543222111112 3689999999999988876 888887631 121211100 000
Q ss_pred ---------CCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEEecCCCcceeEEEEeCC
Q 014724 347 ---------GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 347 ---------~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~~~~t~~hlv~vd~~~ 413 (419)
.++.+-.... ..+...++....+++.++.++..++++++++.|++. +|+++.. .+..++.+.+.+
T Consensus 345 ~~~~~~~~~~i~~~rr~~a-lklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~-~~~~iv~Fr~~~ 419 (490)
T PLN02880 345 NSVVDYKDWQIPLGRRFRS-LKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTP-RIFSLVCFRLVP 419 (490)
T ss_pred cCCCChhccCcCCCCcccH-HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecC-CceEEEEEEEeC
Confidence 0111111111 122235666555667788888889999999999875 8998863 456677777765
No 240
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.73 E-value=3.5e-16 Score=155.37 Aligned_cols=260 Identities=17% Similarity=0.136 Sum_probs=165.1
Q ss_pred hcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChH-H
Q 014724 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 179 (419)
Q Consensus 103 ~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt-~ 179 (419)
+.|.|..+++. +++.+++++.+.+......+||. .|. .+++ +.+++++|++++ +|++++|+ +
T Consensus 19 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~----~g~---~~lr----~~ia~~~~~~~~----~I~~t~G~~~ 83 (337)
T PRK03967 19 YRIWLDKNENPFDLPEELKEEIFEELKRVPFNRYPH----ITS---DPLR----EAIAEFYGLDAE----NIAVGNGSDE 83 (337)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHhhcCccccCCC----CCH---HHHH----HHHHHHhCcCcc----eEEEcCCHHH
Confidence 34777777754 57889999887764221224442 122 2343 567788888774 46777775 5
Q ss_pred HHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcC
Q 014724 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 259 (419)
Q Consensus 180 A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~ 259 (419)
++..++.++ +||+|++++|.|+.+.. .+...|. ++++++.+ +++.+|++.+++.. .++|++++++
T Consensus 84 ~l~~~~~~~--~gd~V~v~~P~y~~~~~--------~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~~--~~~~~v~~~~ 148 (337)
T PRK03967 84 LISYLVKLF--EGKHIVITPPTFGMYSF--------YAKLNGI--PVIDVPLK-EDFTIDGERIAEKA--KNASAVFICS 148 (337)
T ss_pred HHHHHHHHh--CCCeEEEeCCChHHHHH--------HHHHcCC--eEEEeecC-CCCCcCHHHHHHhc--cCCCEEEEeC
Confidence 777776665 79999999998764321 1234455 55555554 35789999998865 3678888899
Q ss_pred CCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC-C-CcEEEeCCCCcC--CCCCeeEEEEeCCCcch
Q 014724 260 SAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-Y-CDVVTTTTHKSL--RGPRGGMIFFKKDPVLG 333 (419)
Q Consensus 260 s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~-~-~Div~~S~hK~l--~GprgG~i~~~~~~~~~ 333 (419)
|+||+ ..+.++|.++++ +++++|+|+++. ++.... ....++ . --++++|++|+| +|.|.||+++++
T Consensus 149 P~NPtG~~~~~~~l~~i~~-~~~~ii~De~y~-~~~~~~-~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~~----- 220 (337)
T PRK03967 149 PNNPTGNLQPEEEILKVLE-TGKPVVLDEAYA-EFSGKS-LIGLIDEYPNLILLRTFSKAFGLAGIRAGYAIANE----- 220 (337)
T ss_pred CCCCCCCCCCHHHHHHHHh-cCCEEEEECchh-hhcccc-hHHHHhhCCCEEEEecchHhhcchhhhheeeecCH-----
Confidence 99985 567899999995 799999999963 433111 101111 1 237889999987 788999999986
Q ss_pred hhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeEEEEe
Q 014724 334 VELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDL 411 (419)
Q Consensus 334 ~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~vd~ 411 (419)
++.+.+.....+. + .+.....++..++.. .+.+.+..+++.++++.+.+.|.+.++ + +....+|+++
T Consensus 221 -~~i~~~~~~~~~~--~-~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~---~--~~~~~~~~~~ 287 (337)
T PRK03967 221 -EIIDALYRIKPPF--S-LNILTMKIVRLALDH--YDLIEERIDYIIKERERVRRELGEYAY---P--SDANFLLLKL 287 (337)
T ss_pred -HHHHHHHhhcCCC--C-CCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHhccCcC---C--CCCcEEEEhH
Confidence 6777666543322 1 122222222333332 123455566677788888888876532 2 3345677765
No 241
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.73 E-value=1.9e-16 Score=159.20 Aligned_cols=221 Identities=24% Similarity=0.286 Sum_probs=148.7
Q ss_pred CCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCcccc
Q 014724 133 GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMT 212 (419)
Q Consensus 133 g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~ 212 (419)
++-.+|+ |++....+| ++++++.|.+. + +.+.||..|+.+++.+++++||+|++.+..|++.... ..
T Consensus 46 ~~~Y~R~--gnPt~~~le----~~la~Le~g~~----a-~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~--~~ 112 (386)
T PF01053_consen 46 GYIYSRY--GNPTVRALE----QRLAALEGGED----A-LLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRL--LE 112 (386)
T ss_dssp SCSBTTT--C-HHHHHHH----HHHHHHHT-SE----E-EEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHH--HH
T ss_pred Ccceecc--ccccHHHHH----HHHHHhhcccc----e-eeccchHHHHHHHHHhhcccCCceEecCCccCcchhh--hh
Confidence 3444443 678778888 56788888765 2 6789999999999999999999999998877765321 00
Q ss_pred ccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCChHHHHHHHHHhC-CEEEEecccc
Q 014724 213 PKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVG-ALLMMDMAHI 289 (419)
Q Consensus 213 ~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~dl~~I~~ia~~~g-a~livD~ah~ 289 (419)
+-....| +++..+ | .-|++++++.+++ ++++|++..|.||+ ..|+++|+++|+++| +++++|.+..
T Consensus 113 --~~l~~~g--v~v~~~--d----~~d~~~l~~~l~~-~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vVDnT~a 181 (386)
T PF01053_consen 113 --ELLPRFG--VEVTFV--D----PTDLEALEAALRP-NTKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVVDNTFA 181 (386)
T ss_dssp --HCHHHTT--SEEEEE--S----TTSHHHHHHHHCT-TEEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEEECTTT
T ss_pred --hhhcccC--cEEEEe--C----chhHHHHHhhccc-cceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEeecccc
Confidence 0111233 344443 2 2589999999986 89999999999995 579999999999998 9999999854
Q ss_pred ccccccCCcCCCCC-CCcEEEeCCCCcCCCCC---eeEEEEeC-CCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHH
Q 014724 290 SGLVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKK-DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCL 364 (419)
Q Consensus 290 ~Gl~~~g~~~~~~~-~~Div~~S~hK~l~Gpr---gG~i~~~~-~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al 364 (419)
.++ ...|++ ++|+++.|..|.+.|.. +|.++.++ . ++.+++..... ..|. ......|. ..+
T Consensus 182 tp~-----~~~pL~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~-----~~~~~l~~~~~--~~G~-~~~p~da~-ll~ 247 (386)
T PF01053_consen 182 TPY-----NQNPLELGADIVVHSATKYLSGHSDVMGGAVVVNGSS-----ELYDRLREFRR--LLGA-TLSPFDAW-LLL 247 (386)
T ss_dssp HTT-----TC-GGGGT-SEEEEETTTTTTTSSSE-EEEEEESSHH-----HHHHHHHHHHH--HHT--B--HHHHH-HHH
T ss_pred cee-----eeccCcCCceEEEeeccccccCCcceeeEEEEECchh-----hhhhhhcchhh--hcCc-cchHHHHH-HHh
Confidence 442 235666 89999999999998875 68888876 3 45555443211 1111 11112222 123
Q ss_pred HHhcChHHHHHHHHHHHHHHHHHHHHHhC
Q 014724 365 KHAQSPEFKVYQNKVVSNCRALASRLVEL 393 (419)
Q Consensus 365 ~~~~~~~~~~~~~~v~~n~~~l~~~L~~~ 393 (419)
+.+. .+..+.+++.+|+..++++|+++
T Consensus 248 rgl~--Tl~~R~~~~~~nA~~lA~~L~~h 274 (386)
T PF01053_consen 248 RGLR--TLPLRMERQNENAEALAEFLEEH 274 (386)
T ss_dssp HHHT--THHHHHHHHHHHHHHHHHHHHTS
T ss_pred cCCC--cHHHHHHHHHHHHHHHHHHHHhC
Confidence 3332 36778899999999999999996
No 242
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.73 E-value=4.7e-17 Score=151.62 Aligned_cols=257 Identities=22% Similarity=0.289 Sum_probs=182.7
Q ss_pred cccccccCCCC----hHHHHHHHhhhhhccCCCCCCCCCCCCchhHH-HHHHHHHHHHHHHHcCCCCCCCceeEecCChH
Q 014724 104 SLELIASENFT----SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYI-DELETLCQKRALAAFNLDENKWGVNVQPLSGS 178 (419)
Q Consensus 104 ~i~L~~sen~~----~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~-~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt 178 (419)
.|....++||+ +|+|.+|-...+. .|..|..+.|+.-|...+ ..|| ..++++.+.+.. ++..++.
T Consensus 68 ~ilnFcaNnYLGLsshPeii~a~~~ale-eyGaGlssvrfIcGtq~iHk~LE----~kiAqfh~rED~-----ilypscf 137 (417)
T KOG1359|consen 68 KILNFCANNYLGLSSHPEIINAGQKALE-EYGAGLSSVRFICGTQDIHKLLE----SKIAQFHGREDT-----ILYPSCF 137 (417)
T ss_pred ceeeecccccccccCChHHHHHHHHHHH-HhCCCccceeEEecchHHHHHHH----HHHHHHhCCCce-----EEecccc
Confidence 35555667785 6999999888875 577788888888887765 5666 567887777762 6677889
Q ss_pred HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhh---hcCCeEE
Q 014724 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAI---LFRPKLI 255 (419)
Q Consensus 179 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~---~~~pklI 255 (419)
.||..++.+++.|.|.|+...+.|.+.+ +| +.+.. .| +.+|.-.+|..+. +.+-|+|
T Consensus 138 dANag~feail~pedAvfSDeLNhASII-dG-------irLck------ry------~h~dv~~l~~~l~~a~k~r~klv 197 (417)
T KOG1359|consen 138 DANAGAFEAILTPEDAVFSDELNHASII-DG-------IRLCK------RY------RHVDVFDLEHCLISACKMRLKLV 197 (417)
T ss_pred ccchHHHHHhcChhhhhhccccccchhh-hh-------hHHHh------hh------ccchhHHHHHHHHHhhhheEEEE
Confidence 9999999999999999999999887765 33 11111 11 2355555554443 3466777
Q ss_pred EEcCCCCCC---cCChHHHHHHHHHhCCEEEEecccccccccc---CC--cCCCCCCCcEEEeCCCCcCCCCCeeEEEEe
Q 014724 256 IAGASAYPR---DFDYPRMRQIADAVGALLMMDMAHISGLVAA---SV--VADPFKYCDVVTTTTHKSLRGPRGGMIFFK 327 (419)
Q Consensus 256 i~~~s~~p~---~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~---g~--~~~~~~~~Div~~S~hK~l~GprgG~i~~~ 327 (419)
+.+. .+++ ..|+++|.++++|||+++++|++|..|..+. |. .......+|++.+|+.|.++|-.|||+.++
T Consensus 198 ~TDg-~FSMDGdiaPl~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga~GGyttgp 276 (417)
T KOG1359|consen 198 VTDG-VFSMDGDIAPLEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGASGGYTTGP 276 (417)
T ss_pred Eecc-eeccCCCcccHHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcCCCCCCccCC
Confidence 7764 4443 4578999999999999999999998887643 21 111122679999999999999999999999
Q ss_pred CCCcchhhHHHHhhhcccCCCCCCChHHHHHHHH-HHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEec
Q 014724 328 KDPVLGVELESAINNAVFPGLQGGPHNHTIGGLA-VCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS 399 (419)
Q Consensus 328 ~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala-~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~ 399 (419)
+ .+.+.+++...|++.++..+..+.+.+ .++..++. -.+...+...|.++|++.++..||++..
T Consensus 277 ~------~li~llrqr~RpylFSnslppavV~~a~ka~dllm~--s~~~i~~~~a~~qrfr~~me~aGftIsg 341 (417)
T KOG1359|consen 277 K------PLISLLRQRSRPYLFSNSLPPAVVGMAAKAYDLLMV--SSKEIQSRQANTQRFREFMEAAGFTISG 341 (417)
T ss_pred h------hHHHHHHhcCCceeecCCCChhhhhhhHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHhcCceecC
Confidence 8 688888777677766554443333222 23333331 1345667788899999999999998753
No 243
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.72 E-value=2.7e-16 Score=157.85 Aligned_cols=208 Identities=18% Similarity=0.146 Sum_probs=136.8
Q ss_pred hHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccc
Q 014724 144 EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY 223 (419)
Q Consensus 144 ~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~ 223 (419)
+...++| +.+++++ ..+ .++++||+.|+..++.++++|||+|+++++.|++...... ..+...|.
T Consensus 51 p~~~~Le----~~lA~l~--~~~----~v~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~----~~l~~~G~- 115 (366)
T PRK07582 51 PTWRALE----AALGELE--GAE----ALVFPSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAR----EYLAPLGV- 115 (366)
T ss_pred ccHHHHH----HHHHHHc--CCC----EEEECCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHH----HHHhcCeE-
Confidence 3345666 4566776 221 4788999999999999999999999999888765421100 01122344
Q ss_pred cEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcCCC
Q 014724 224 FESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADP 301 (419)
Q Consensus 224 ~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~ 301 (419)
++..++.++ . .+ . +. .++++|++++|+||+ ..|+++|.++|+++|+++++|++|.... + ..|
T Consensus 116 -~v~~v~~~~-~----~~---~-~~-~~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~t~~~~~---~--~~p 179 (366)
T PRK07582 116 -TVREAPTAG-M----AE---A-AL-AGADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDNTTATPL---G--QRP 179 (366)
T ss_pred -EEEEECCCC-h----HH---H-hc-cCceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEECCCCCcc---c--cCc
Confidence 444443321 1 11 2 22 378999999999985 5799999999999999999999975332 1 234
Q ss_pred CC-CCcEEEeCCCCcCCCCC---eeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHH
Q 014724 302 FK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQN 377 (419)
Q Consensus 302 ~~-~~Div~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~ 377 (419)
++ ++|++++|+||++.|+. +|+++.+++ ++.+++....... ...+.. ..+ ..++..+. .+..+.+
T Consensus 180 ~~~g~Divv~S~sK~l~G~~g~~~G~v~~~~~-----~l~~~l~~~~~~~-g~~~~~--~~a-~l~~r~l~--tl~~R~~ 248 (366)
T PRK07582 180 LELGADLVVASDTKALTGHSDLLLGYVAGRDP-----ELMAAVERWRLLA-GAIPGP--FEA-WLAHRSLG--TLGLRFA 248 (366)
T ss_pred hhcCCcEEEecccccccCCCCeeEEEEEcCcH-----HHHHHHHHHHHHh-CCCCCH--HHH-HHHHhccc--cHHHHHH
Confidence 44 78999999999998865 599887654 5666554322111 111211 111 12233332 3566778
Q ss_pred HHHHHHHHHHHHHHhC
Q 014724 378 KVVSNCRALASRLVEL 393 (419)
Q Consensus 378 ~v~~n~~~l~~~L~~~ 393 (419)
++.+|+..++++|+++
T Consensus 249 ~~~~na~~la~~L~~~ 264 (366)
T PRK07582 249 RQCANALAVAELLAGH 264 (366)
T ss_pred HHHHHHHHHHHHHHhC
Confidence 8999999999999986
No 244
>PLN02590 probable tyrosine decarboxylase
Probab=99.72 E-value=1.6e-15 Score=157.91 Aligned_cols=254 Identities=18% Similarity=0.131 Sum_probs=164.4
Q ss_pred hHHHHHHHHHHHHHHHHcCCCCCCC----ceeEecCChHHHHHHHHHHccC-----------CCCEEEEeCCCCCccccC
Q 014724 144 EYIDELETLCQKRALAAFNLDENKW----GVNVQPLSGSPANFEVYTAILK-----------PHDRIMGLDLPHGGHLSH 208 (419)
Q Consensus 144 ~~~~~lE~~~~~~la~~~g~~~~~~----~v~V~~~sGt~A~~~~~~all~-----------pGD~Vl~~~~~~~g~~s~ 208 (419)
+...++|+.+.+|+++++|++...| +--+++++||+||+.++.+.-+ |.=.|++.+..| ++.
T Consensus 166 Pa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH---~Sv 242 (539)
T PLN02590 166 PAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTH---SSF 242 (539)
T ss_pred chhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCch---HHH
Confidence 3456899999999999999986411 1235677889999887755421 111333444434 322
Q ss_pred ccccccccccccccc---cEEEecccCC-CCCCCCHHHHHHHhhhc-----CCeEEEE--cCCCCCCcCChHHHHHHHHH
Q 014724 209 GFMTPKRRVSGTSIY---FESMPYRLDE-STGLVDYDMLEKTAILF-----RPKLIIA--GASAYPRDFDYPRMRQIADA 277 (419)
Q Consensus 209 ~~~~~~~~i~~~g~~---~~~v~~~~~~-~~~~iD~d~Le~~l~~~-----~pklIi~--~~s~~p~~~dl~~I~~ia~~ 277 (419)
. |.+.+.|++ ++.++ +|. +++.+|+++|++.+++. .|-+|+. +.++++...|+++|+++|++
T Consensus 243 ~-----KAa~ilGlg~~~vr~Vp--~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~ 315 (539)
T PLN02590 243 R-----KACLIGGIHEENIRLLK--TDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKK 315 (539)
T ss_pred H-----HHHHHcCCCcccEEEEe--CCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHH
Confidence 1 345666764 34444 543 35799999999999653 2555553 45566678899999999999
Q ss_pred hCCEEEEeccccccccccCCcC---CCCCCCcEEEeCCCCcCCCCC-eeEEEEeCCCcchhhHHH-------Hhhhc---
Q 014724 278 VGALLMMDMAHISGLVAASVVA---DPFKYCDVVTTTTHKSLRGPR-GGMIFFKKDPVLGVELES-------AINNA--- 343 (419)
Q Consensus 278 ~ga~livD~ah~~Gl~~~g~~~---~~~~~~Div~~S~hK~l~Gpr-gG~i~~~~~~~~~~~l~~-------~i~~~--- 343 (419)
||+|++||+|++........+. ..++.+|.++...||++..|- +|+++++++. .+.+ ++...
T Consensus 316 ~g~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p~~cg~llvr~~~----~l~~a~~~~~~YL~~~~~~ 391 (539)
T PLN02590 316 YGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQTCSPLWVKDRY----SLIDALKTNPEYLEFKVSK 391 (539)
T ss_pred hCCeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcCcCEEEEEecCHH----HHHHHhhcCHHHhCCcccc
Confidence 9999999999643322222111 123468999999999997775 5888888741 1221 12110
Q ss_pred ---cc----CCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEEecCCCcceeEEEEeCC
Q 014724 344 ---VF----PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 344 ---~~----~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~~~~t~~hlv~vd~~~ 413 (419)
.+ ...+.+-... ...+..+++....+++++++++..+++++|.+.|++. +|+++.. ....+|.+.+.+
T Consensus 392 ~~~~~d~~d~~i~lsRr~r-aLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~-~~l~iVcFr~~~ 467 (539)
T PLN02590 392 KDTVVNYKDWQISLSRRFR-SLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTT-RYFSLVCFRLAP 467 (539)
T ss_pred cccCCCccccCCCCCCchH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC-CceEEEEEEecC
Confidence 00 0122222222 2334456777766788999999999999999999885 7998863 455666666655
No 245
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.72 E-value=5.3e-16 Score=154.60 Aligned_cols=216 Identities=22% Similarity=0.233 Sum_probs=151.6
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccc
Q 014724 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (419)
Q Consensus 142 g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g 221 (419)
||+..+.+| +.++++-|.+. .+.+.||..|+..++.+++++||+|+..+..||+.+.. +. +.....|
T Consensus 61 ~nPT~~~lE----~~~a~LEg~~~-----~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~--~~--~~l~~~g 127 (396)
T COG0626 61 GNPTRDALE----EALAELEGGED-----AFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRL--FE--KILQKFG 127 (396)
T ss_pred CCccHHHHH----HHHHHhhCCCc-----EEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHH--HH--HHHHhcC
Confidence 567778888 45666667665 27889999999999999999999999998888776421 10 1112233
Q ss_pred cccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcC
Q 014724 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (419)
Q Consensus 222 ~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~ 299 (419)
+++..++ .-|.+++++.+.+.++|+|++..|.||+ ..|+++|+++|+++|+++++|..-..++ +.
T Consensus 128 --i~~~~~d------~~~~~~~~~~~~~~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNTfatP~-----~q 194 (396)
T COG0626 128 --VEVTFVD------PGDDEALEAAIKEPNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNTFATPV-----LQ 194 (396)
T ss_pred --eEEEEEC------CCChHHHHHHhcccCceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEEECCccccc-----cc
Confidence 3444432 1345566666654589999999999995 6799999999999999999999854443 35
Q ss_pred CCCC-CCcEEEeCCCCcCCCCC---eeEEEEeCCCcchhhHHHHhhhccc--CCCCCCChHHHHHHHHHHHHHhcChHHH
Q 014724 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVF--PGLQGGPHNHTIGGLAVCLKHAQSPEFK 373 (419)
Q Consensus 300 ~~~~-~~Div~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~--~~~~g~p~~~~iaala~al~~~~~~~~~ 373 (419)
.|++ |+||++.|..|.+.|-. +|+++++++ ++.+.+..... .+..-+| .-|. ..++-+. .+.
T Consensus 195 ~PL~~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~-----~~~~~~~~~~~~~~G~~l~p----~dA~-l~lRGlk--TL~ 262 (396)
T COG0626 195 RPLELGADIVVHSATKYLGGHSDVLGGVVLTPNE-----ELYELLFFAQRANTGAVLSP----FDAW-LLLRGLR--TLA 262 (396)
T ss_pred ChhhcCCCEEEEeccccccCCcceeeeEEecChH-----HHHHHHHHHHHhhcCCCCCH----HHHH-HHHhccc--hHH
Confidence 6777 89999999999997753 487776765 55555422211 2222222 2222 2333332 366
Q ss_pred HHHHHHHHHHHHHHHHHHhC-Cc
Q 014724 374 VYQNKVVSNCRALASRLVEL-GY 395 (419)
Q Consensus 374 ~~~~~v~~n~~~l~~~L~~~-G~ 395 (419)
-+.+++.+|+..++++|+++ .+
T Consensus 263 ~Rm~~~~~nA~~IA~~L~~~p~V 285 (396)
T COG0626 263 LRMERHNENALKIAEFLADHPKV 285 (396)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCe
Confidence 78899999999999999996 44
No 246
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.72 E-value=2.3e-16 Score=139.15 Aligned_cols=163 Identities=26% Similarity=0.300 Sum_probs=114.8
Q ss_pred HHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccC
Q 014724 153 CQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD 232 (419)
Q Consensus 153 ~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~ 232 (419)
++++++++|+.+.+ + + +++.+|+.|+..++.++.++|++|++.++.|.++... .....|. +...++.+
T Consensus 5 ~~~~l~~~~~~~~~-~-~-~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~-------~~~~~g~--~~~~v~~~ 72 (170)
T cd01494 5 LEEKLARLLQPGND-K-A-VFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWV-------AAELAGA--KPVPVPVD 72 (170)
T ss_pred HHHHHHHHcCCCCC-c-E-EEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehhh-------HHHhcCC--EEEEeccC
Confidence 45788899964432 2 3 4455889999999999999999999999888776421 1234454 44444444
Q ss_pred CCC-CCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCCCCcEEE
Q 014724 233 EST-GLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVT 309 (419)
Q Consensus 233 ~~~-~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~~~Div~ 309 (419)
..+ ..+|.+.+++.....+++++++++++++. ..|+++|+++|+++|+++++|++|..+............++|+++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~d~~~ 152 (170)
T cd01494 73 DAGYGGLDVAILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPGVLIPEGGADVVT 152 (170)
T ss_pred CCCccchhhhhhhhccccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEecccccccccccccccccccCCEEE
Confidence 222 23333466555545578999998877763 467899999999999999999998766543211111122799999
Q ss_pred eCCCCcCCCCCeeEEEEe
Q 014724 310 TTTHKSLRGPRGGMIFFK 327 (419)
Q Consensus 310 ~S~hK~l~GprgG~i~~~ 327 (419)
.|+||+|.+|++|+++++
T Consensus 153 ~s~~K~~~~~~~G~l~~~ 170 (170)
T cd01494 153 FSLHKNLGGEGGGVVIVK 170 (170)
T ss_pred EEcccccCCCceEEEEeC
Confidence 999999988889999864
No 247
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.70 E-value=5.9e-15 Score=148.22 Aligned_cols=250 Identities=21% Similarity=0.191 Sum_probs=158.2
Q ss_pred hHHHHHHHHHHHHHHHHcCCCCCC----CceeEecCChHHHHHHHHHHccC--------CC-----C-EEEEeCCCCCcc
Q 014724 144 EYIDELETLCQKRALAAFNLDENK----WGVNVQPLSGSPANFEVYTAILK--------PH-----D-RIMGLDLPHGGH 205 (419)
Q Consensus 144 ~~~~~lE~~~~~~la~~~g~~~~~----~~v~V~~~sGt~A~~~~~~all~--------pG-----D-~Vl~~~~~~~g~ 205 (419)
+...++|.++.+|+++++|.+.+. .+..+++++||++|+.++.+..+ .| . .|++.+-.|.+.
T Consensus 75 P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~ 154 (373)
T PF00282_consen 75 PAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSI 154 (373)
T ss_dssp HHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THH
T ss_pred cccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHH
Confidence 556789999999999999999321 02457778889999877755421 12 2 344544444332
Q ss_pred ccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhc--C---CeEEEE--cCCCCCCcCChHHHHHHHHHh
Q 014724 206 LSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF--R---PKLIIA--GASAYPRDFDYPRMRQIADAV 278 (419)
Q Consensus 206 ~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~--~---pklIi~--~~s~~p~~~dl~~I~~ia~~~ 278 (419)
.|.+.+.|++++.++ +++ ++.+|+++|++.+++. + |-+|+. +.+..+...|+++|+++|+++
T Consensus 155 --------~Kaa~~lGlg~~~I~--~~~-~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~ 223 (373)
T PF00282_consen 155 --------EKAARILGLGVRKIP--TDE-DGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKY 223 (373)
T ss_dssp --------HHHHHHTTSEEEEE---BBT-TSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHC
T ss_pred --------HHhcceeeeEEEEec--CCc-chhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhcccc
Confidence 145567787655544 553 7899999999998653 2 323433 445566788999999999999
Q ss_pred CCEEEEeccccccccccCCcC---CCCCCCcEEEeCCCCcCCCCCe-eEEEEeCCCcchhhHHHHhhh---cc-------
Q 014724 279 GALLMMDMAHISGLVAASVVA---DPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINN---AV------- 344 (419)
Q Consensus 279 ga~livD~ah~~Gl~~~g~~~---~~~~~~Div~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~~---~~------- 344 (419)
++|++||+|++........+. .-++.+|.++.++||++..|-+ |+++++++. .+...+.. +.
T Consensus 224 ~~wlHVDaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~~~~~l~r~~~----~l~~~~~~~~~Yl~~~~~~~ 299 (373)
T PF00282_consen 224 NIWLHVDAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLGVPYGCGVLLVRDKS----DLRDAFSINADYLGNDDRES 299 (373)
T ss_dssp T-EEEEEETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS-SSS-EEEEESSGG----GHHGGGEEEETCTT-S-SSS
T ss_pred ceeeeecccccccccccccccccccccccccccccchhhhhcCCccceeEEeeccc----chHHHhccChhhhccccccc
Confidence 999999999542222222111 1123789999999999977754 888888751 12222100 00
Q ss_pred -------cCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEEecCCCcceeEEEE
Q 014724 345 -------FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLVLVD 410 (419)
Q Consensus 345 -------~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~~~~t~~hlv~vd 410 (419)
...++++-... ...+...++....+++.++.++..+++++|++.|++. +|+++. ..+..+|-+.
T Consensus 300 ~~~~~~~~~tl~~SR~~~-alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~-~~~~~~vcFr 371 (373)
T PF00282_consen 300 DESYDYGDYTLQGSRRFR-ALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVN-EPDLNIVCFR 371 (373)
T ss_dssp -GGGCEEEGSSSSSGHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESS-TTSSSEEEEE
T ss_pred ccccccccccccccccch-HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEc-CCCceEEEEE
Confidence 11234444222 2334456776666788999999999999999999997 588875 2444444443
No 248
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.70 E-value=1.7e-16 Score=168.28 Aligned_cols=231 Identities=18% Similarity=0.151 Sum_probs=158.4
Q ss_pred HHHHHHHHcCCCCCCCceeEecCChH-HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEeccc
Q 014724 153 CQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 231 (419)
Q Consensus 153 ~~~~la~~~g~~~~~~~v~V~~~sGt-~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~ 231 (419)
+++.++++||.+.. .++++|| .+|.+++.+++.|||+||+...+|-+.+ |+ .+.++|+ +++.+..
T Consensus 179 Aq~~AA~~fgAd~t-----yFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~-hg------aLiLsGa--~PVYl~P 244 (720)
T PRK13578 179 AQKHAAKVFNADKT-----YFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNH-HG------ALIQAGA--TPVYLET 244 (720)
T ss_pred HHHHHHHHhCCCce-----EEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHH-HH------HHHHcCC--eEEEeec
Confidence 45788999999984 4556775 5999999999999999999998877654 32 1345665 3443321
Q ss_pred CC-CC---CCCCHHH-----HHHHhhhc--------C-CeEEEEcCCCC-CCcCChHHHHHH-HHHhCCEEEEecccccc
Q 014724 232 DE-ST---GLVDYDM-----LEKTAILF--------R-PKLIIAGASAY-PRDFDYPRMRQI-ADAVGALLMMDMAHISG 291 (419)
Q Consensus 232 ~~-~~---~~iD~d~-----Le~~l~~~--------~-pklIi~~~s~~-p~~~dl~~I~~i-a~~~ga~livD~ah~~G 291 (419)
.. .. +.|+.+. +++.++++ + .|++++.+|+| +...|++.|.++ +++++ +|++|+||+.-
T Consensus 245 ~~n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTYdG~~ydi~~I~~~~~h~~~-~llvDEAhgah 323 (720)
T PRK13578 245 ARNPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTYDGTIYNARQVVDKIGHLCD-YILFDSAWVGY 323 (720)
T ss_pred cccccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCCcceeecHHHHHHHhhccCC-cEEEeCcchhh
Confidence 11 12 3466555 88888764 2 37777766665 778899999998 68888 99999999766
Q ss_pred ccccCC---cC-CCCC-CCc----EEEeCCCCcCCCCC-eeEEEEeCCCcch---hhHHHHhhhcccCCCCCCChHHHHH
Q 014724 292 LVAASV---VA-DPFK-YCD----VVTTTTHKSLRGPR-GGMIFFKKDPVLG---VELESAINNAVFPGLQGGPHNHTIG 358 (419)
Q Consensus 292 l~~~g~---~~-~~~~-~~D----iv~~S~hK~l~Gpr-gG~i~~~~~~~~~---~~l~~~i~~~~~~~~~g~p~~~~ia 358 (419)
..+... ++ +.++ ++| +++-|+||++++.. +++|..++..+.. +--.++++.+..-...++|+...+|
T Consensus 324 ~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~alTQaS~LHvk~~~i~g~~~~v~~~r~~~al~m~qSTSPsY~LmA 403 (720)
T PRK13578 324 EQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNHIKGQARYCPHKRLNNAFMLHASTSPFYPLFA 403 (720)
T ss_pred hccCcccccCChhhhhcCCCCCCeEEEEChhhcchhhhhHhhhhcCCcccccccccCCHHHHHHHHHHHcCCChHHHHHH
Confidence 554432 11 2233 788 99999999998874 5777665531100 0002445554333334688889999
Q ss_pred HHHHHHHHhcChHHHHHHHHHHHHHHHHHHHH-Hh-CCcEEe
Q 014724 359 GLAVCLKHAQSPEFKVYQNKVVSNCRALASRL-VE-LGYKLV 398 (419)
Q Consensus 359 ala~al~~~~~~~~~~~~~~v~~n~~~l~~~L-~~-~G~~v~ 398 (419)
++-+|...+..+..++..++..+.+..+++.| +. .+|+++
T Consensus 404 SLDva~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~~ 445 (720)
T PRK13578 404 ALDVNAKMHEGESGRRLWMECVKLGIEARKLILARCKLIRPF 445 (720)
T ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhCCCeeec
Confidence 99887776654455777888888888899988 44 377766
No 249
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.70 E-value=1.8e-15 Score=149.76 Aligned_cols=214 Identities=16% Similarity=0.125 Sum_probs=136.8
Q ss_pred HHHHHHHcCCCCCCCceeEecCChH-HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccC
Q 014724 154 QKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD 232 (419)
Q Consensus 154 ~~~la~~~g~~~~~~~v~V~~~sGt-~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~ 232 (419)
++.+++.+|.+ +|++++|+ +|+..+. .+.|||+|++.+|+|..+.. .+...|. ++++++.
T Consensus 55 r~~ia~~~~~~------~I~it~Gs~~al~~~~--~~~~gd~v~v~~P~y~~~~~--------~~~~~g~--~~~~v~~- 115 (330)
T PRK05664 55 EAAARAYYGAP------QLLPVAGSQAAIQALP--RLRAPGRVGVLSPCYAEHAH--------AWRRAGH--QVRELDE- 115 (330)
T ss_pred HHHHHHHhCCC------CEEECcCHHHHHHHHH--HccCCCEEEEcCCChHHHHH--------HHHHcCC--eEEEech-
Confidence 35677777764 36778876 5777664 46899999999998766532 2334555 4444432
Q ss_pred CCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cC---ChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC-CCc
Q 014724 233 ESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCD 306 (419)
Q Consensus 233 ~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~---dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~-~~D 306 (419)
+++++.+. ++|++++++|+||+ .. ++++|.++|+++|++||+|+++. +....... ..+. +..
T Consensus 116 --------~~~~~~~~--~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~-~~~~~~s~-~~~~~~~~ 183 (330)
T PRK05664 116 --------AEVEAALD--SLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFM-DNTPQHSL-AACAHRPG 183 (330)
T ss_pred --------hhHhhhhc--CCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcc-cCCCcccc-cccccCCC
Confidence 34555553 67888888999996 33 46677777889999999999953 32211000 0111 222
Q ss_pred -EEEeCCCCcC--CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHH
Q 014724 307 -VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNC 383 (419)
Q Consensus 307 -iv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~ 383 (419)
++++|+||+| +|.|.||+++++ ++.+.+.....+... ... ...+...+|... ...+..++++.+++
T Consensus 184 vi~~~SfSK~~gl~GlRiG~~v~~~------~l~~~~~~~~~~~~~--~~~-~~~~~~~~L~~~--~~~~~~~~~~~~~r 252 (330)
T PRK05664 184 LIVLRSFGKFFGLAGARLGFVLAEP------ALLRALAELLGPWTV--SGP-TRWLAQAALADT--PWQRRQRERLLAAS 252 (330)
T ss_pred EEEEeeccccccCCCcceEEEEeCH------HHHHHHHHhcCCCCC--CHH-HHHHHHHHHhCh--HHHHHHHHHHHHHH
Confidence 7899999987 789999999987 677776654333221 111 122223344321 22356677788889
Q ss_pred HHHHHHHHhCCcEEecCCCcceeEEEEe
Q 014724 384 RALASRLVELGYKLVSGGSDNHLVLVDL 411 (419)
Q Consensus 384 ~~l~~~L~~~G~~v~~~~t~~hlv~vd~ 411 (419)
+++.+.|++.|++.. ++...++|+++
T Consensus 253 ~~l~~~L~~~~~~~~--~~~~~f~~~~~ 278 (330)
T PRK05664 253 QRLAALLRRHGLTPA--GGCALFQWVRT 278 (330)
T ss_pred HHHHHHHHHCCCccc--CCcceEEEEec
Confidence 999999999887643 23345677765
No 250
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.69 E-value=1.8e-15 Score=149.74 Aligned_cols=254 Identities=20% Similarity=0.203 Sum_probs=157.9
Q ss_pred hhcccccccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHH-H
Q 014724 102 FKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP-A 180 (419)
Q Consensus 102 ~~~i~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~-A 180 (419)
++.+.|..++|..++.+.+.....+ . .||.. . ..++ ++++++++|.+++ ++++++|+. +
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~-~----~y~~~------~-~~~l----r~~la~~~~~~~~----~i~~t~G~~~~ 76 (330)
T TIGR01140 17 EDWLDFSTGINPLGPPVPPIPASAW-A----RYPDP------E-YDEL----RAAAAAYYGLPAA----SVLPVNGAQEA 76 (330)
T ss_pred hheeEccccCCCCCCChhhcchHHH-h----hCCCc------c-HHHH----HHHHHHHhCCChh----hEEECCCHHHH
Confidence 3457787787765433444332222 1 23221 1 1244 4677788898763 477788765 6
Q ss_pred HHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCC
Q 014724 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS 260 (419)
Q Consensus 181 ~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s 260 (419)
+..+. .++.+| .|++.+|.|..+.. .+...|. ++++++ |++.+++.++ ++++|++..|
T Consensus 77 i~~~~-~~l~~g-~vl~~~p~y~~~~~--------~~~~~g~--~~~~~~--------d~~~l~~~~~--~~~~v~i~~p 134 (330)
T TIGR01140 77 IYLLP-RLLAPG-RVLVLAPTYSEYAR--------AWRAAGH--EVVELP--------DLDRLPAALE--ELDVLVLCNP 134 (330)
T ss_pred HHHHH-HHhCCC-eEEEeCCCcHHHHH--------HHHHcCC--EEEEeC--------CHHHHHhhcc--cCCEEEEeCC
Confidence 66654 446788 68888888766532 1233443 454432 7899998884 5788888889
Q ss_pred CCCC--cCC---hHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcC--CCCCeeEEEEeCCCc
Q 014724 261 AYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSL--RGPRGGMIFFKKDPV 331 (419)
Q Consensus 261 ~~p~--~~d---l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l--~GprgG~i~~~~~~~ 331 (419)
+||+ ..+ +++|+++|+++|++||+|++|. ++..........+ ..+++++|+||+| +|.|.|+++.++
T Consensus 135 ~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~--- 210 (330)
T TIGR01140 135 NNPTGRLIPPETLLALAARLRARGGWLVVDEAFI-DFTPDASLAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAHP--- 210 (330)
T ss_pred CCCCCCCCCHHHHHHHHHHhHhcCCEEEEECccc-ccCCccchhhHhccCCCEEEEEecchhhcCchhhhhheeCCH---
Confidence 9985 445 6778888999999999999963 3332211000011 3458999999997 566789999887
Q ss_pred chhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHH-HHHHHHHHHHHHHHHHHHHhCC-cEEecCCCcceeEEE
Q 014724 332 LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF-KVYQNKVVSNCRALASRLVELG-YKLVSGGSDNHLVLV 409 (419)
Q Consensus 332 ~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~-~~~~~~v~~n~~~l~~~L~~~G-~~v~~~~t~~hlv~v 409 (419)
++.+.+....... +.+....+++...++ ..++ +...+++.++++.+.+.|++.| +++.+ ....++|+
T Consensus 211 ---~~~~~l~~~~~~~---~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~~~~f~~~ 279 (330)
T TIGR01140 211 ---ALLARLREALGPW---TVNGPARAAGRAALA---DTAWQAATRARLAAERARLAALLARLGGLEVVG--GTALFLLV 279 (330)
T ss_pred ---HHHHHHHhcCCCC---CchHHHHHHHHHHHh---chHHHHHHHHHHHHHHHHHHHHHHhCCCceECC--CCCeEEEE
Confidence 6766666543221 111112222222232 2334 5667888999999999999987 55543 34577998
Q ss_pred EeC
Q 014724 410 DLR 412 (419)
Q Consensus 410 d~~ 412 (419)
++.
T Consensus 280 ~~~ 282 (330)
T TIGR01140 280 RTP 282 (330)
T ss_pred EcC
Confidence 875
No 251
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.69 E-value=1.2e-15 Score=151.27 Aligned_cols=221 Identities=12% Similarity=0.080 Sum_probs=142.5
Q ss_pred HHHHHHHcCCCCCCCceeEecCChH-HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccC
Q 014724 154 QKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD 232 (419)
Q Consensus 154 ~~~la~~~g~~~~~~~v~V~~~sGt-~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~ 232 (419)
++.+++++|.+.. +|++++|+ +++..++. +++||+ |++++|++..+.. .+...|.. +++++++
T Consensus 46 r~~ia~~~~~~~~----~I~it~Gs~~~l~~~~~-~~~~~~-vv~~~P~y~~y~~--------~~~~~G~~--v~~vp~~ 109 (332)
T PRK06425 46 EDQIKIYTQGLKI----KVLIGPGLTHFIYRLLS-YINVGN-IIIVEPNFNEYKG--------YAFTHGIR--ISALPFN 109 (332)
T ss_pred HHHHHHHhCCCcc----eEEECCCHHHHHHHHHH-HhCCCc-EEEeCCChHHHHH--------HHHHcCCe--EEEEeCC
Confidence 3678889999874 47778775 58877775 568875 6666887766532 23456664 4444454
Q ss_pred CCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCC---hHHHHHHHHHhCCEEEEeccccccccccCCcCCCC---C-
Q 014724 233 ESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K- 303 (419)
Q Consensus 233 ~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~d---l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~---~- 303 (419)
+ ..+|.+.++ +.++|+|++++|+||+ ..+ +++|.++|+++|++||+|++ +..+...+. ++.. +
T Consensus 110 ~--~~~~~~~l~----~~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~-Y~~~~~~~~-~~~~~~~~~ 181 (332)
T PRK06425 110 L--INNNPEILN----NYNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEA-FIDFVPNRA-EEDVLLNRS 181 (332)
T ss_pred c--ccCcHHHHh----hcCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecc-hhccccccc-hhHHHHhcc
Confidence 2 345655544 2478999999999996 233 67788889999999999999 445543321 1111 1
Q ss_pred CC-cEEEeCCCCcC--CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChH-HHHHHHHH
Q 014724 304 YC-DVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPE-FKVYQNKV 379 (419)
Q Consensus 304 ~~-Div~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~-~~~~~~~v 379 (419)
+. -++++|++|++ +|.|.||+++++ ++.+.+.....+... ...+ .. ++.....+. .++..+.+
T Consensus 182 ~~~vi~~~SfSK~~~l~GlRiGy~v~~~------~li~~l~~~~~~~~~-----~~~~-~~-~l~~~~~~~~~~~~~~~~ 248 (332)
T PRK06425 182 YGNVIIGRSLTKILGIPSLRIGYIATDD------YNMKISRKITEPWSV-----CDPA-ID-FIRSIDLDYVAKHSLDIM 248 (332)
T ss_pred CCCEEEEeecHHhcCCchhhheeeecCH------HHHHHHHHcCCCCcc-----CHHH-HH-HHHHhhhHHHHHHHHHHH
Confidence 22 37889999976 789999999987 677776654332211 1111 11 122111112 24567778
Q ss_pred HHHHHHHHHHHHhCCcEEecCCCcceeEEEEeC
Q 014724 380 VSNCRALASRLVELGYKLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 380 ~~n~~~l~~~L~~~G~~v~~~~t~~hlv~vd~~ 412 (419)
.++++++.+.|++.|+++... ++.+++|+.+.
T Consensus 249 ~~~r~~l~~~L~~~g~~~~~~-~~g~f~~~~~~ 280 (332)
T PRK06425 249 ENERSYLINNLEAMGFRAAGD-PSANFITFMIP 280 (332)
T ss_pred HHHHHHHHHHHHHCCCEECCC-CCceEEEEEcC
Confidence 888999999999999887632 34456888763
No 252
>PLN02452 phosphoserine transaminase
Probab=99.69 E-value=1.3e-15 Score=152.33 Aligned_cols=263 Identities=15% Similarity=0.146 Sum_probs=171.5
Q ss_pred hcccccccCCCChHHHHHHHhhhhhccCCCCC--CCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHH
Q 014724 103 KSLELIASENFTSRAVMEAVGSCLTNKYSEGL--PGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 180 (419)
Q Consensus 103 ~~i~L~~sen~~~~~V~eal~~~l~~~y~~g~--p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A 180 (419)
+.++++||+..+|+.|++++...+.+....|. ..- ...+.++.+.++ .+++.++++++++. +|.+.++..|||.+
T Consensus 7 ~~~~f~pGP~~lp~~Vl~~~~~~~~~~~~~g~s~~~~-sHRs~~f~~i~~-~~~~~L~~l~~~p~-~y~v~~l~Gsgt~~ 83 (365)
T PLN02452 7 RVFNFSAGPATLPANVLAKAQAELYNWEGSGMSVMEM-SHRGKEFLSIIQ-KAEADLRELLDIPD-NYEVLFLQGGASTQ 83 (365)
T ss_pred ceEeeeCCCCCCCHHHHHHHHHHHhcccccCcccccc-CCCchHHHHHHH-HHHHHHHHHhCCCC-CceEEEEeCccHHH
Confidence 45889999999999999999988755322222 111 122446655554 67899999999854 35465566778999
Q ss_pred HHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCC
Q 014724 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS 260 (419)
Q Consensus 181 ~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s 260 (419)
+.+++.+++.+||++++.. .|.++..+. +.+...|........+....+..+|+++++. ..+++.|.+++.
T Consensus 84 ~ea~~~nl~~~~~~~l~~~---~G~fg~r~~---~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~hn 154 (365)
T PLN02452 84 FAAIPLNLCKPGDKADFVV---TGSWSKKAA---KEAKKYCKTNVIASGKDEKYTKIPSVSEWEL---TPDAKFVHICAN 154 (365)
T ss_pred HHHHHHhcCCCCCeEEEEE---CCHHHHHHH---HHHHHhCCCcEEEecCCCCCCCCCChHHcCC---CCCCcEEEECCC
Confidence 9999999999999999885 344443321 1222334321221111111122577777522 124677766554
Q ss_pred C--CCCc-CChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCCCCcEEEeCCCCcCCCCCe-eEEEEeCCCcchhhH
Q 014724 261 A--YPRD-FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVEL 336 (419)
Q Consensus 261 ~--~p~~-~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~~~Div~~S~hK~l~Gprg-G~i~~~~~~~~~~~l 336 (419)
. +++. .|++++. ++++++|+++..|.. +.+++..++..+|.||+| ||.| |+++.+++ +
T Consensus 155 ETstGv~~~~~~~i~------~~~lvVDa~Ss~g~~-----pidv~~~~v~~~saqK~l-GP~Gl~~v~vr~~------~ 216 (365)
T PLN02452 155 ETIHGVEFKDYPDVG------NVPLVADMSSNFLSK-----PVDVSKYGVIYAGAQKNV-GPSGVTIVIIRKD------L 216 (365)
T ss_pred CCCCcEecCcccccC------CCeEEEECCccccCc-----ccCHHHcCEEEEeccccc-CCCCeEEEEEcHH------H
Confidence 4 4443 5666553 389999999876632 222333455667999988 7998 88888873 3
Q ss_pred HHHhhhc---cc--------CCCCCCChHHHHHHHHHHHHHhcCh-HHHHHHHHHHHHHHHHHHHHHhC-Cc
Q 014724 337 ESAINNA---VF--------PGLQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVEL-GY 395 (419)
Q Consensus 337 ~~~i~~~---~~--------~~~~g~p~~~~iaala~al~~~~~~-~~~~~~~~v~~n~~~l~~~L~~~-G~ 395 (419)
.+++... .+ ..+.++|+.+.+.++..+|+.+.+. +++.+.++..++++++++.|++. ||
T Consensus 217 l~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~ 288 (365)
T PLN02452 217 IGNARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNGF 288 (365)
T ss_pred HhhcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 3332211 00 1123688889999999999988765 68999999999999999999984 77
No 253
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.69 E-value=7.8e-16 Score=154.25 Aligned_cols=258 Identities=10% Similarity=-0.016 Sum_probs=161.4
Q ss_pred cccccccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHH
Q 014724 104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 183 (419)
Q Consensus 104 ~i~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~ 183 (419)
...+++|+..++++|++++......-. +.+ ..+.++.+.++ .+++.+++++|++.+ +.+.+...|||.|+++
T Consensus 4 ~~~f~pGP~~~~~~v~~a~~~~~~~~~---~~~---hr~~~f~~~~~-~~r~~l~~l~~~~~~-~~v~f~~gs~T~a~~~ 75 (361)
T TIGR01366 4 DGRFGSGPSKVRLEQLQALTTTAASLF---GTS---HRQAPVKNLVG-RVREGLAELFSLPDG-YEVILGNGGATAFWDA 75 (361)
T ss_pred CCcccCCCcCCCHHHHHHHHhcCcccc---ccC---cCChHHHHHHH-HHHHHHHHHhCCCCC-ceEEEECCchhHHHHH
Confidence 346889999999999999875310000 011 12345666666 688999999999643 3232223568999999
Q ss_pred HHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC-
Q 014724 184 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY- 262 (419)
Q Consensus 184 ~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~- 262 (419)
++.+++.+ +.+.+..-.++..+.+.. +.....+ .++.+++ + .+..++.+ +. .++|+|++.+.+|
T Consensus 76 ~~~~l~~~-~~l~i~~G~~~~~~~~~a----~~~~~~~-~~~~~~~--~-~~~~~~~~-----~~-~~~~lV~~~h~et~ 140 (361)
T TIGR01366 76 ATFGLIEK-KSLHLSFGEFSSKFAKAV----KLAPWLG-EPIIVTA--D-PGSAPEPQ-----AD-PGVDVIAWAHNETS 140 (361)
T ss_pred HHHhcccc-cccEEecCHHHHHHHHHH----HhhhccC-CceEEec--C-CCCCCCCc-----cC-CCCCEEEEcccCCc
Confidence 99999753 222222222222221110 0000112 2344443 2 23344432 22 3789887766444
Q ss_pred -CCcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCCCCcEEEeCCCCcCCCCCe-eEEEEeCCCcchhhHHHHh
Q 014724 263 -PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAI 340 (419)
Q Consensus 263 -p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~~~Div~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i 340 (419)
+...|+++| ++++|+++++|+++++|.. +..++.+|++++|.||+|++|.| ++++.+++ +.+++
T Consensus 141 tG~~~pi~~I---~~~~g~~~iVDavqs~g~~-----~idv~~~D~~~~s~~K~lg~~~Gl~~~~~s~~------~~~~~ 206 (361)
T TIGR01366 141 TGVAVPVRRP---EGSDDALVVIDATSGAGGL-----PVDIAETDVYYFAPQKNFASDGGLWLAIMSPA------ALERI 206 (361)
T ss_pred cceecccccc---cccCCCeEEEEcCccccCC-----CCCHHHCCEEEEEchhhcCCCCceEEEEECHH------HHhhh
Confidence 467788776 5889999999999987743 22333689999999999977766 34445652 22222
Q ss_pred h--------------------hcccCCCCCCChHHHHHHHHHHHHHhcCh-HHHHHHHHHHHHHHHHHHHHHhCC-cEEe
Q 014724 341 N--------------------NAVFPGLQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVELG-YKLV 398 (419)
Q Consensus 341 ~--------------------~~~~~~~~g~p~~~~iaala~al~~~~~~-~~~~~~~~v~~n~~~l~~~L~~~G-~~v~ 398 (419)
. ...-.++.++|....+.++..+++.+... +++...+++.+.+++++++|.+.| ++++
T Consensus 207 ~~~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~ 286 (361)
T TIGR01366 207 EAIAASGRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPF 286 (361)
T ss_pred hcccCCCCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccC
Confidence 1 11112345677778888899999988766 478888999999999999999987 4555
No 254
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.68 E-value=3.3e-15 Score=162.31 Aligned_cols=243 Identities=19% Similarity=0.204 Sum_probs=162.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccC--------CCCEEEEeCCCCCccccCcccccccccc
Q 014724 147 DELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--------PHDRIMGLDLPHGGHLSHGFMTPKRRVS 218 (419)
Q Consensus 147 ~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~--------pGD~Vl~~~~~~~g~~s~~~~~~~~~i~ 218 (419)
.+++.+.+.|+++++|.+. +.+++++|+.|..+.+.++-. ..++|+++...|+.+.. .+.
T Consensus 529 lq~i~elq~~l~eltGmd~----~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPa--------sa~ 596 (939)
T TIGR00461 529 QELIAQLEKWLCSITGFDA----ISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPA--------SAA 596 (939)
T ss_pred HHHHHHHHHHHHHHHCCCC----cccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHH--------HHH
Confidence 3555667899999999996 468889999888876666532 33578888887876642 223
Q ss_pred ccccccEEEecccCCCCCCCCHHHHHHHhhh--cCCeEEEEcCCCC-CCcCC-hHHHHHHHHHhCCEEEEeccccccccc
Q 014724 219 GTSIYFESMPYRLDESTGLVDYDMLEKTAIL--FRPKLIIAGASAY-PRDFD-YPRMRQIADAVGALLMMDMAHISGLVA 294 (419)
Q Consensus 219 ~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~--~~pklIi~~~s~~-p~~~d-l~~I~~ia~~~ga~livD~ah~~Gl~~ 294 (419)
..|. +++.++++ ++|.+|+++|++++++ .++++|++.++++ +...| +++|+++||++|+++++|.||..++..
T Consensus 597 ~~G~--~Vv~V~~d-~~G~iDle~L~~~i~~~~~~taaV~iT~pst~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~ 673 (939)
T TIGR00461 597 MAGM--QVVPVNCD-QDGNIDLVDLKNKAEQHGDELAAVMVTYPSTHGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVG 673 (939)
T ss_pred HCCC--EEEEeccC-CCCCcCHHHHHHHHhhcCCceEEEEEEeCCcCceecccHHHHHHHHHHcCCEEEEEecChhhCCC
Confidence 4555 55555565 5789999999999975 3678888776554 44445 999999999999999999998665432
Q ss_pred cCCcCCCCC-CCcEEEeCCCCcCCCC-----Ce-eEEEEeCCCcchhhHHHHhhhccc-------------CCCCCCChH
Q 014724 295 ASVVADPFK-YCDVVTTTTHKSLRGP-----RG-GMIFFKKDPVLGVELESAINNAVF-------------PGLQGGPHN 354 (419)
Q Consensus 295 ~g~~~~~~~-~~Div~~S~hK~l~Gp-----rg-G~i~~~~~~~~~~~l~~~i~~~~~-------------~~~~g~p~~ 354 (419)
...|-+ ++|++++|.||+|.+| +| |++.+++. +...+-.... ....+.+..
T Consensus 674 ---l~~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~------L~~~lPg~~v~~t~d~~greq~Iga~s~~~~g 744 (939)
T TIGR00461 674 ---LTSPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSH------LIPFLPKHDVVSMITGIGGSKSIGSVSAAPYG 744 (939)
T ss_pred ---CCCccccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhh------chhhcCCCcccccccCCCCccccccccccccC
Confidence 123323 8999999999998633 33 88888863 2211110000 000011111
Q ss_pred HHHHHH--HHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCC---CcceeEEEEeCCc
Q 014724 355 HTIGGL--AVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGG---SDNHLVLVDLRPM 414 (419)
Q Consensus 355 ~~iaal--a~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~---t~~hlv~vd~~~~ 414 (419)
+...++ ...++.+..+++++..++...|++|+++.|.+ ++++...+ .--|-+.+|+++.
T Consensus 745 ~a~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~-~~~~l~~~~~~~~~hEfv~~~~~~ 808 (939)
T TIGR00461 745 SASILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKD-HYPILFVGTLKHVAHECILDLRPL 808 (939)
T ss_pred cHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhc-cCcccccCCCCceeEEEEEeccch
Confidence 211111 12345555566788888899999999999987 77766432 3457788899853
No 255
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.68 E-value=1.7e-15 Score=150.58 Aligned_cols=218 Identities=17% Similarity=0.139 Sum_probs=136.7
Q ss_pred HHHHHHHHcCCCCCCCceeEecCChH-HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEeccc
Q 014724 153 CQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 231 (419)
Q Consensus 153 ~~~~la~~~g~~~~~~~v~V~~~sGt-~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~ 231 (419)
.++.+++++|++..+ +|++++|+ +++..+ ..+++||| |++.+|++..+.. .+...|. ++++++.
T Consensus 58 L~~~ia~~~~~~~~~---~I~i~~Gs~e~i~~l-~~~~~~g~-v~v~~P~y~~y~~--------~~~~~g~--~~~~v~~ 122 (339)
T PRK06959 58 LAACAARYYGAPDAA---HVLPVAGSQAAIRAL-PALLPRGR-VGIAPLAYSEYAP--------AFARHGH--RVVPLDE 122 (339)
T ss_pred HHHHHHHHhCCCCcc---cEEECcCHHHHHHHH-HHhcCCCe-EEEcCCCcHHHHH--------HHHHCCC--EEEeecc
Confidence 346788999997422 47778886 577654 45678887 8888888766532 2234554 4555443
Q ss_pred CCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCChHH---HHHHHHHhCCEEEEeccccccccccCCcCCCCCCC-
Q 014724 232 DESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPR---MRQIADAVGALLMMDMAHISGLVAASVVADPFKYC- 305 (419)
Q Consensus 232 ~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~dl~~---I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~~~- 305 (419)
+. +.++ ...+++++++|+||+ ..+.++ |++.|++++.++|+|+++. .+..........++.
T Consensus 123 ~~-------~~~~-----~~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~-~~~~~~s~~~~~~~~~ 189 (339)
T PRK06959 123 AA-------DTLP-----AALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFA-DTLPAASLAAHTDRPG 189 (339)
T ss_pred cc-------hhcc-----ccCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCc-cCCCcccchhccCCCC
Confidence 31 2221 145788999999995 345444 4455667899999999954 433211000101122
Q ss_pred cEEEeCCCCcC--CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHH
Q 014724 306 DVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNC 383 (419)
Q Consensus 306 Div~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~ 383 (419)
-++++|++|.| +|.|.||+++++ ++.+.+.....+... +. ....+...++.. .+..++..+++.+++
T Consensus 190 vi~l~SfSK~~gl~GlRiGy~v~~~------~li~~l~~~~~~~~v--s~-~~q~a~~~~L~~--~~~~~~~~~~~~~~r 258 (339)
T PRK06959 190 LVVLRSVGKFFGLAGVRAGFVLAAP------ALLAALRDALGAWTV--SG-PARHAVRAAFAD--AAWQAAMRERLAADG 258 (339)
T ss_pred EEEEecChhhcCCcchheEEEecCH------HHHHHHHHhcCCCCC--cH-HHHHHHHHHhCc--HHHHHHHHHHHHHHH
Confidence 27899999986 789999999987 677777665433322 11 122222333432 122356678888899
Q ss_pred HHHHHHHHhCCcEEecCCCcceeEEEEeC
Q 014724 384 RALASRLVELGYKLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 384 ~~l~~~L~~~G~~v~~~~t~~hlv~vd~~ 412 (419)
+++.+.|++.|+++.. ...++|+++.
T Consensus 259 ~~l~~~L~~~g~~~~~---~~~f~~~~~~ 284 (339)
T PRK06959 259 ARLAALLRAHGFAVHA---TPLFSWTDDP 284 (339)
T ss_pred HHHHHHHHHCCCCccC---cceEEEEeCC
Confidence 9999999999988763 2466888864
No 256
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.68 E-value=7.2e-15 Score=149.94 Aligned_cols=284 Identities=13% Similarity=0.039 Sum_probs=160.1
Q ss_pred hhcccccccCC-CC---hHHHHHHHhhhhhcc-C---CCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEe
Q 014724 102 FKSLELIASEN-FT---SRAVMEAVGSCLTNK-Y---SEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQ 173 (419)
Q Consensus 102 ~~~i~L~~sen-~~---~~~V~eal~~~l~~~-y---~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~ 173 (419)
.+.|+|..+.. .. .+.+.+++...+... + ..+|+. ..|. .++.+.+.+++.+.+|.+.+ + .+|+
T Consensus 30 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~---~~LR~aia~~~~~~~g~~v~-~-~~I~ 101 (416)
T PRK09440 30 PGAIMLGGGNPAHIPEMEDYFRDLLADLLASGKLTEALGNYDG---PQGK---DELIEALAALLNERYGWNIS-P-QNIA 101 (416)
T ss_pred CCceeccCCCCCccCCHHHHHHHHHHHHhcCcccccccccCCC---CCCC---HHHHHHHHHHHHHHhCCCCC-h-hhEE
Confidence 44588876542 22 245566665544321 1 012332 1232 35666777888777775532 1 2577
Q ss_pred cCChH-HHHHHHHHHccC-----CCCEEEE-eCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHH
Q 014724 174 PLSGS-PANFEVYTAILK-----PHDRIMG-LDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKT 246 (419)
Q Consensus 174 ~~sGt-~A~~~~~~all~-----pGD~Vl~-~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~ 246 (419)
+++|+ +|+..++.++++ +||.|++ .+|++.++...... .. ...+.....++++.+...+.+|+++|+
T Consensus 102 it~Ga~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~d~~~l~-- 175 (416)
T PRK09440 102 LTNGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLE---ED-LFVSYRPNIELLPEGQFKYHVDFEHLH-- 175 (416)
T ss_pred EccChHHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhc---cC-ceeecccccccccccccccCCCHHHcc--
Confidence 78875 589999999885 6999999 69988776421100 00 011111122232211113579999997
Q ss_pred hhhcCCeEEEEcCCCCCC--cC---ChHHHHHHHHHhCCEEEEeccccccccccCC-cCCCCC---CCcEEEeCCCCc-C
Q 014724 247 AILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASV-VADPFK---YCDVVTTTTHKS-L 316 (419)
Q Consensus 247 l~~~~pklIi~~~s~~p~--~~---dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~-~~~~~~---~~Div~~S~hK~-l 316 (419)
+. .+++++++++|+||+ .. .+++|.++|+++|++||+|+++.. .. ... .....+ .--|+++|+||+ +
T Consensus 176 ~~-~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~-~~-~~~~~~~~~~~~~~~vI~~~SfSK~~~ 252 (416)
T PRK09440 176 ID-EDTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGP-PF-PGIIFSEATPLWNPNIILCMSLSKLGL 252 (416)
T ss_pred cC-CCceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccc-cC-CCcchhhcCccccCCeEEEecccccCC
Confidence 33 467999999999996 23 367889999999999999999632 11 100 000001 122778999996 4
Q ss_pred CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHH-----HHHHHHHHHHHHHHHHH
Q 014724 317 RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKV-----YQNKVVSNCRALASRLV 391 (419)
Q Consensus 317 ~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~-----~~~~v~~n~~~l~~~L~ 391 (419)
+|.|.||+++++ ++.+.+.........+.+... ..+++.++.. .++.+ ..+.+.++++.+.+.|.
T Consensus 253 pGlRiG~~i~~~------~l~~~~~~~~~~~~~~~s~~~-q~~~~~~l~~---~~~~~~~~~~~~~~~~~r~~~~~~~L~ 322 (416)
T PRK09440 253 PGVRCGIVIADE------EIIEALSNMNGIISLAPGRLG-PAIAAEMIES---GDLLRLSETVIRPFYRQKVQLAIALLR 322 (416)
T ss_pred CcceEEEEeCCH------HHHHHHHHHHHHhccCCCcHH-HHHHHHHhcc---chHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999877 566666543322211222222 2222323322 12211 23334445555666665
Q ss_pred h----CCcEEecCCCcceeEEEEeCC
Q 014724 392 E----LGYKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 392 ~----~G~~v~~~~t~~hlv~vd~~~ 413 (419)
+ .++.+.. .....++|+++.+
T Consensus 323 ~~l~~~~~~~~~-p~gg~fiw~~~~~ 347 (416)
T PRK09440 323 RYLPDEPCLIHK-PEGAIFLWLWFKD 347 (416)
T ss_pred HhcccCCeEEec-CCCceEEEEECCC
Confidence 4 3555443 2346789999875
No 257
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.68 E-value=6.1e-15 Score=162.49 Aligned_cols=243 Identities=19% Similarity=0.195 Sum_probs=157.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHcc----CCCC----EEEEeCCCCCccccCcccccccccc
Q 014724 147 DELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL----KPHD----RIMGLDLPHGGHLSHGFMTPKRRVS 218 (419)
Q Consensus 147 ~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all----~pGD----~Vl~~~~~~~g~~s~~~~~~~~~i~ 218 (419)
.+++.+.++++++++|.+. +.+++++|+.|+.+.+.++. ++|| +|++++..|+++.. .+.
T Consensus 541 l~~i~e~q~~l~eltG~d~----~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~--------sa~ 608 (954)
T PRK05367 541 RELIDQLEAWLAEITGYDA----VSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPA--------SAV 608 (954)
T ss_pred HHHHHHHHHHHHHHHCCCC----EEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHH--------HHH
Confidence 3555567899999999985 45777777788866554443 5676 58998887877642 234
Q ss_pred ccccccEEEecccCCCCCCCCHHHHHHHhhhc--CCeEEEEcCCCCC-C-cCChHHHHHHHHHhCCEEEEeccccccccc
Q 014724 219 GTSIYFESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAGASAYP-R-DFDYPRMRQIADAVGALLMMDMAHISGLVA 294 (419)
Q Consensus 219 ~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~--~pklIi~~~s~~p-~-~~dl~~I~~ia~~~ga~livD~ah~~Gl~~ 294 (419)
..|. +++.++++ .++.+|+++|+++++++ ++.+|++.++++. . ..|+++|+++||++|+++++|+||..+++.
T Consensus 609 ~~G~--~vv~v~~d-~~G~iD~~~L~~~i~~~~~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~ 685 (954)
T PRK05367 609 MAGM--KVVVVACD-ENGNIDLDDLRAKAEEHADNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMNAQVG 685 (954)
T ss_pred HCCC--EEEEECCC-CCCCcCHHHHHHHHhccCCCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChhhccC
Confidence 4565 55555555 46899999999999764 4566666666554 3 368999999999999999999999766542
Q ss_pred cCCcCCCCC-CCcEEEeCCCCcCCCCCe------eEEEEeCCCcchhhHHHHhhhc-----ccCCCCCCCh---H-HHHH
Q 014724 295 ASVVADPFK-YCDVVTTTTHKSLRGPRG------GMIFFKKDPVLGVELESAINNA-----VFPGLQGGPH---N-HTIG 358 (419)
Q Consensus 295 ~g~~~~~~~-~~Div~~S~hK~l~Gprg------G~i~~~~~~~~~~~l~~~i~~~-----~~~~~~g~p~---~-~~ia 358 (419)
- ..|-+ ++|++++++||||.+|.| |++.+++. +...+... ......|.-. . +...
T Consensus 686 l---~~pg~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~------l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~ 756 (954)
T PRK05367 686 L---ARPGDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAH------LAPFLPGHPVQIAGGETGIGAVSAAPFGSASI 756 (954)
T ss_pred C---CChhhcCCCEEEecCcccCCCCcCCCCCceEEEeeccc------ccccCCCCccCcCCCCCCcCcchhHHHHHHHH
Confidence 1 22333 899999999999865543 67877752 33222111 0110011111 0 1111
Q ss_pred HH-H-HHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEec---CCCcceeEEEEeCCc
Q 014724 359 GL-A-VCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS---GGSDNHLVLVDLRPM 414 (419)
Q Consensus 359 al-a-~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~---~~t~~hlv~vd~~~~ 414 (419)
+. + ..+..+..+++++..++...+++++++.|.+ ++++.. ++.-.|-..+|++++
T Consensus 757 ~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~-~~~~~~~~~~~~~~~e~i~~~~~~ 816 (954)
T PRK05367 757 LPISWMYIRMMGAEGLRQATEVAILNANYIAKRLKD-HYPVLYTGANGRVAHECILDLRPL 816 (954)
T ss_pred HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHh-hcCccccCCCCCcccceEEEeecc
Confidence 11 1 1234444456678888888999999999987 455432 224467788888753
No 258
>PRK08637 hypothetical protein; Provisional
Probab=99.67 E-value=1.2e-14 Score=147.19 Aligned_cols=243 Identities=17% Similarity=0.180 Sum_probs=140.8
Q ss_pred HHHHHHHHHHHHHcC-CCCCCCceeEecCCh-HHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccc-ccccccc
Q 014724 148 ELETLCQKRALAAFN-LDENKWGVNVQPLSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRV-SGTSIYF 224 (419)
Q Consensus 148 ~lE~~~~~~la~~~g-~~~~~~~v~V~~~sG-t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i-~~~g~~~ 224 (419)
++.+.+.+++.+..+ .+++.+ .+|++++| ++|+..++.++++|||+|++.+|.|+.+.. .+ ...|.
T Consensus 48 ~lr~~ia~~~~~~~~~~~~~~~-~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~--------~~~~~~g~-- 116 (388)
T PRK08637 48 ELRDLWQEKMLRENPSLSGKKM-SLPIVTNALTHGLSLVADLFVDQGDTVLLPDHNWGNYKL--------TFNTRRGA-- 116 (388)
T ss_pred HHHHHHHHHHhccCcccccccc-ceeeEccchHHHHHHHHHHhcCCCCEEEEcCCCCccHHH--------HHHHhcCC--
Confidence 454444444444332 332212 24666777 569999999999999999999998876642 11 13454
Q ss_pred EEEecccCCCCCCCCHHHHHHHhh---hcCCeEEEEcCCCCCCc-----CChHHHHHHHHH-----hCCEEEEecccccc
Q 014724 225 ESMPYRLDESTGLVDYDMLEKTAI---LFRPKLIIAGASAYPRD-----FDYPRMRQIADA-----VGALLMMDMAHISG 291 (419)
Q Consensus 225 ~~v~~~~~~~~~~iD~d~Le~~l~---~~~pklIi~~~s~~p~~-----~dl~~I~~ia~~-----~ga~livD~ah~~G 291 (419)
++++++...+++.+|++++++.++ +...+++++++|+||+- ..+++|+++|++ |+++||+|+++ .+
T Consensus 117 ~vv~v~~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y-~~ 195 (388)
T PRK08637 117 EIVTYPIFDEDGGFDTDALKEALQAAYNKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDDAY-FG 195 (388)
T ss_pred EEEEecccCCCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecccc-hh
Confidence 455555532345789999999876 22345677888999963 246778887775 89999999994 56
Q ss_pred ccccCCcC-CCC----C-CCcE---EEeCCCCcC--CCCCeeEEEEeC-----CCcchhhHHHHhhhc----ccCCCCCC
Q 014724 292 LVAASVVA-DPF----K-YCDV---VTTTTHKSL--RGPRGGMIFFKK-----DPVLGVELESAINNA----VFPGLQGG 351 (419)
Q Consensus 292 l~~~g~~~-~~~----~-~~Di---v~~S~hK~l--~GprgG~i~~~~-----~~~~~~~l~~~i~~~----~~~~~~g~ 351 (419)
+.+.+... +.+ + ...+ .++|++|.+ +|.|.||++... + ++.+.+... ......+.
T Consensus 196 l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~~~~~~~~-----~l~~~~~~~~~~~~~~~~~~~ 270 (388)
T PRK08637 196 LFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITFGTKAGSSQ-----TVKEALEKKVKGLIRSNISNG 270 (388)
T ss_pred cccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEEccccCCcH-----HHHHHHHHHHHHHhhcccCCC
Confidence 66544211 111 1 1122 345999964 889999998653 2 455544321 11111112
Q ss_pred ChHHHHHHHHHHHHHhcChHHH----HHHHHHHHHHHHHHHHHHhC----CcEEecCCCcceeEEEEeC
Q 014724 352 PHNHTIGGLAVCLKHAQSPEFK----VYQNKVVSNCRALASRLVEL----GYKLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 352 p~~~~iaala~al~~~~~~~~~----~~~~~v~~n~~~l~~~L~~~----G~~v~~~~t~~hlv~vd~~ 412 (419)
+. ....++..++. .+.+. +....+.++++.+.+.|++. ++.+..+ ....++|+++.
T Consensus 271 s~-~~q~a~~~~l~---~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~-~~g~~~~~~l~ 334 (388)
T PRK08637 271 PH-PSQSAVLRALN---SPEFDKEKQEKFQILKERYEKTKEVLYDGKYDDAWQAYPF-NSGYFMCLKLK 334 (388)
T ss_pred Cc-HHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccc-cceEEEEecCC
Confidence 22 22223232332 22332 23334555556677777665 4655542 34567888875
No 259
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.67 E-value=6e-15 Score=147.65 Aligned_cols=272 Identities=17% Similarity=0.192 Sum_probs=179.2
Q ss_pred CChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccC-C
Q 014724 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK-P 191 (419)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~-p 191 (419)
-++++.++||.. ..+ .|+|.+.+.+|| +.++++||.+. .+.+.+|..++.+++..+++ |
T Consensus 54 apS~~m~aAM~~-----GDD------~Y~gdpSv~~Le----e~vael~G~E~-----alpthqGRgaE~Il~~~~~~~~ 113 (467)
T TIGR02617 54 AVTQSMQAAMMR-----GDE------AYSGSRSYYALA----ESVKNIFGYQY-----TIPTHQGRGAEQIYIPVLIKKR 113 (467)
T ss_pred CCCHHHHHHHHc-----CCc------ccccCchHHHHH----HHHHHHhCCce-----EEECCCCchHHHHHHHhhcccc
Confidence 367888888864 111 244555566777 56778999987 26677999999999999998 8
Q ss_pred CCEEEEeCC----CCCccccCccccccccccccccccEEEecc------cC-CCCCCCCHHHHHHHhhhcC---CeEE--
Q 014724 192 HDRIMGLDL----PHGGHLSHGFMTPKRRVSGTSIYFESMPYR------LD-ESTGLVDYDMLEKTAILFR---PKLI-- 255 (419)
Q Consensus 192 GD~Vl~~~~----~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~------~~-~~~~~iD~d~Le~~l~~~~---pklI-- 255 (419)
||++.+... .|..|+..+ ...+...|.....++.+ .+ +.+|.+|+++|++.++++. ...+
T Consensus 114 g~e~g~~~~~~~v~hn~~fett----~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v~~ 189 (467)
T TIGR02617 114 EQEKGLDRSKMVAFSNYFFDTT----QGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVA 189 (467)
T ss_pred cccccccccccccceEEEEecc----hHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceeeee
Confidence 998885543 344444211 01234556533332111 11 1357999999999998532 2222
Q ss_pred -EEcCCCCCCcC---ChHHHHHHHHHhCCEEEEecccccc-c--------cccCCcCC-----CCCCCcEEEeCCCCcCC
Q 014724 256 -IAGASAYPRDF---DYPRMRQIADAVGALLMMDMAHISG-L--------VAASVVAD-----PFKYCDVVTTTTHKSLR 317 (419)
Q Consensus 256 -i~~~s~~p~~~---dl~~I~~ia~~~ga~livD~ah~~G-l--------~~~g~~~~-----~~~~~Div~~S~hK~l~ 317 (419)
++++...+.+. .++++.++|++||+.++.|.|-.+. . .+.+.-.. .+.++|.++.|++|.+.
T Consensus 190 tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKglg 269 (467)
T TIGR02617 190 TITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDAM 269 (467)
T ss_pred eEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCCC
Confidence 23333344444 4678899999999999999986442 2 12221111 12489999999999998
Q ss_pred CCCeeEEEEeCCCcchhhHHHHhhhc-----ccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHh
Q 014724 318 GPRGGMIFFKKDPVLGVELESAINNA-----VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE 392 (419)
Q Consensus 318 GprgG~i~~~~~~~~~~~l~~~i~~~-----~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~ 392 (419)
.|-||+++++++.. .++.++.... -|+ +.||-....+.|++++|.+..++ .|.+......++|.+.|.+
T Consensus 270 ApvGg~Lag~d~~~--~~l~~~~~~~~i~~EGf~-tYGGlagrd~ea~a~Gl~e~~~~---~yl~~ri~qv~yl~~~L~~ 343 (467)
T TIGR02617 270 VPMGGLLCFKDDSF--FDVYTECRTLCVVQEGFP-TYGGLEGGAMERLAVGLYDGMNL---DWLAYRINQVQYLVNGLEE 343 (467)
T ss_pred CcccceEEecchhH--HHHHHHHHhhcccccCCc-CcCchhHHHHHHHHhhhhhcccH---HHHHHHHHHHHHHHHHHHh
Confidence 99999999998510 0222333221 122 34666677788888889888653 4566666668999999999
Q ss_pred CCcEEecCCCcceeEEEEeCCccc
Q 014724 393 LGYKLVSGGSDNHLVLVDLRPMVT 416 (419)
Q Consensus 393 ~G~~v~~~~t~~hlv~vd~~~~~~ 416 (419)
.|+.++. +..|-|+||.+.+..
T Consensus 344 ~Gvpi~~--~Gghav~iDa~~~lp 365 (467)
T TIGR02617 344 IGVVCQQ--AGGHAAFVDAGKLLP 365 (467)
T ss_pred CCCcEEe--cCccEEEEehhhhCC
Confidence 9999876 667999999987643
No 260
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.66 E-value=5.2e-17 Score=157.37 Aligned_cols=261 Identities=21% Similarity=0.239 Sum_probs=163.3
Q ss_pred cCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHcc
Q 014724 110 SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL 189 (419)
Q Consensus 110 sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all 189 (419)
|.| .+|++++++..... |.. -|++.+...++| ++++++||.+. + +++.+||.||.+++.+++
T Consensus 4 SD~-~~~~m~~a~~~a~~-----gd~---~Yg~D~~~~~l~----~~i~~l~g~e~----a-~f~~sGT~An~~al~~~~ 65 (290)
T PF01212_consen 4 SDT-PTPAMLEAMAAANV-----GDD---AYGEDPTTARLE----ERIAELFGKEA----A-LFVPSGTMANQLALRAHL 65 (290)
T ss_dssp -SS-S-HHEEHHHHHTTS-----B-C---CTTSSHHHHHHH----HHHHHHHTSSE----E-EEESSHHHHHHHHHHHHH
T ss_pred ccC-CCHHHHHHHHcccc-----CCc---ccCCChhHHHHH----HHHHHHcCCCE----E-EEeCCCChHHHHHHHHHH
Confidence 455 78899999955432 111 155667777777 57788999986 2 678899999999999999
Q ss_pred CCCCEEEEeCCCCCccccCccccccccc-cccccccEEEecccCCCCCCCCHHHHHHHhhh-----cCCeEEEEcCCCC-
Q 014724 190 KPHDRIMGLDLPHGGHLSHGFMTPKRRV-SGTSIYFESMPYRLDESTGLVDYDMLEKTAIL-----FRPKLIIAGASAY- 262 (419)
Q Consensus 190 ~pGD~Vl~~~~~~~g~~s~~~~~~~~~i-~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~-----~~pklIi~~~s~~- 262 (419)
+|++.|++.+..|--....+ .+ .+.|. +.++++.+ +++.+|+++|++.+.. .+|++|.+..|++
T Consensus 66 ~~~~~vi~~~~aHi~~~E~g------a~~~~~G~--~~~~l~~~-~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~ 136 (290)
T PF01212_consen 66 RPGESVICADTAHIHFDETG------AIEELSGA--KLIPLPSD-DDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTEL 136 (290)
T ss_dssp HTTEEEEEETTEHHHHSSTT------HHHHHTTC--EEEEEBEC-TGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTT
T ss_pred hcCCceeccccceeeeeccc------hhhHhcCc--EEEECCCc-ccCCCCHHHHHHHhhhccccCCCccEEEEEecCcC
Confidence 99999999876432211111 22 34565 55555443 2389999999999987 3578999988776
Q ss_pred --CCcC---ChHHHHHHHHHhCCEEEEecccccccc-ccCCcC-CCCCCCcEEEeCCCCcCCCCCeeEEEEeCCCcchhh
Q 014724 263 --PRDF---DYPRMRQIADAVGALLMMDMAHISGLV-AASVVA-DPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVE 335 (419)
Q Consensus 263 --p~~~---dl~~I~~ia~~~ga~livD~ah~~Gl~-~~g~~~-~~~~~~Div~~S~hK~l~GprgG~i~~~~~~~~~~~ 335 (419)
++.. ++++|.++|++||+.|+.|.|-..-.. ..+... ....++|+++.|++|.+..|-|+++++++ +
T Consensus 137 ~GG~~~s~~el~ai~~~a~~~gl~lhmDGARl~~a~~~~~~~~~e~~~~~D~v~~~~tK~~g~~~Gavl~~~~------~ 210 (290)
T PF01212_consen 137 AGGTVYSLEELRAISELAREHGLPLHMDGARLANAAAALGVSLAEIAAGADSVSFGGTKNGGAPGGAVLAGNK------E 210 (290)
T ss_dssp TTSB---HHHHHHHHHHHHHHT-EEEEEETTHHHHHCHHHHHHHHHHTTSSEEEEETTSTT-SSSEEEEEESH------H
T ss_pred CCCeeCCHHHHHHHHHHHHhCceEEEEehhhHHHhhhcccccHHHHhhhCCEEEEEEEcccccccceEEEech------H
Confidence 4444 567888999999999999998532211 111101 11138999999999999888999999998 4
Q ss_pred HHH-Hhhhcc-cCC--CCCCChHHHHHH----HHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeE
Q 014724 336 LES-AINNAV-FPG--LQGGPHNHTIGG----LAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLV 407 (419)
Q Consensus 336 l~~-~i~~~~-~~~--~~g~p~~~~iaa----la~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv 407 (419)
+.+ ...... ..+ .+.+ .+++ ...++..+ +.+.....+-.++++.|++.|++.|+.+.. .+++|.+
T Consensus 211 ~i~~~~~~~k~~gg~~~~~G----~~~a~~~~~~~~l~~l--~~~~~~~~~~~~~A~~La~~l~~~~~~~~~-~~~tn~~ 283 (290)
T PF01212_consen 211 FIAKARRQRKRLGGGMRQAG----VLAAAELYQFAALRAL--ELWLERARHANAMAKRLAAGLEALGGVLPR-PVETNQV 283 (290)
T ss_dssp HHHHHHHHHHHHTHHHHHTT----HHHHHHHHHHHHHCHE--ECSHHHHHCHHHHHHCHHHCHHEECEEEET-TSS-HHH
T ss_pred HHHHHHHHHHHhccCeeecc----eeeeechhhHHHHHHH--HhhHHHHHHHHHHHHHHHHHHHHCCCcccC-CCCCcEE
Confidence 322 211111 100 0111 1222 01122222 122455666777889999999999987654 3555555
Q ss_pred EEE
Q 014724 408 LVD 410 (419)
Q Consensus 408 ~vd 410 (419)
+++
T Consensus 284 ~~~ 286 (290)
T PF01212_consen 284 FVD 286 (290)
T ss_dssp HHH
T ss_pred eEE
Confidence 443
No 261
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.66 E-value=1.6e-14 Score=140.35 Aligned_cols=229 Identities=17% Similarity=0.163 Sum_probs=153.8
Q ss_pred eEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCcccccccccc-ccccccEEEecccCCC-CCCCCHHHHHHHhh
Q 014724 171 NVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVS-GTSIYFESMPYRLDES-TGLVDYDMLEKTAI 248 (419)
Q Consensus 171 ~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~-~~g~~~~~v~~~~~~~-~~~iD~d~Le~~l~ 248 (419)
.|++.++|.||.++...|.+|||..|++.|.|+|+-- .+. ..| ++.+|+.++.. ++.|+.++||+++.
T Consensus 149 ~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdr--------dl~~rTg--veivpv~c~Ss~~f~itv~alE~A~~ 218 (471)
T KOG0256|consen 149 VVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDR--------DLRWRTG--VEIVPVHCSSSNGFQITVEALEAALN 218 (471)
T ss_pred eEEecccchhhHHHHHHhcCCCceeeecCCCCCcccc--------cceeccC--ceEEEEEeecCCCccccHHHHHHHHH
Confidence 3555556889999999999999999999998888632 222 345 47777766653 56999999998885
Q ss_pred h-----cCCeEEEEcCCCCCC--c---CChHHHHHHHHHhCCEEEEeccccccccccCC-cCCCCC-------CCc--EE
Q 014724 249 L-----FRPKLIIAGASAYPR--D---FDYPRMRQIADAVGALLMMDMAHISGLVAASV-VADPFK-------YCD--VV 308 (419)
Q Consensus 249 ~-----~~pklIi~~~s~~p~--~---~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~-~~~~~~-------~~D--iv 308 (419)
+ .+.|.|++.+|+||. . ..+..+.++|.++++-+|+|++ |+|.++... +.+-++ ..| -+
T Consensus 219 ~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEI-ya~sVF~~~~F~Sv~ev~~~~~~~~~rvHi 297 (471)
T KOG0256|consen 219 QARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEI-YAGSVFDKSEFRSVLEVRKDPHLDPDRVHI 297 (471)
T ss_pred HHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehh-hcccccCccCceEHHHHhhccccCCCcEEE
Confidence 4 256788888889983 2 2466788888999999999999 577776532 211111 122 46
Q ss_pred EeCCCCcC--CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHH
Q 014724 309 TTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRAL 386 (419)
Q Consensus 309 ~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l 386 (419)
+-|++|-| +|.|.|.|+..++ ++.....+....+..++-.-+.++++. .=.+..+..+.+..+|+...-+++
T Consensus 298 vyslSKD~GlpGfRvGviYS~ne-----~VvsaA~kmssf~~vSs~tQ~~la~LL-SD~~f~~~yl~en~~Rl~~rh~~~ 371 (471)
T KOG0256|consen 298 VYSLSKDFGLPGFRVGVIYSNNE-----DVVSAATKMSSFGLVSSQTQYLLASLL-SDEEFTREYLRENNKRLRIRHRYI 371 (471)
T ss_pred EEEeccccCCCceEEEEEEecCh-----HHHHHHHHHhhccCCcHHHHHHHHHHh-chHHHHHHHHHHHHHHHHHHHHHH
Confidence 78899965 7889999999886 555544432222222111112222221 112222122245567777778899
Q ss_pred HHHHHhCCcEEecCCCcceeEEEEeCCcccc
Q 014724 387 ASRLVELGYKLVSGGSDNHLVLVDLRPMVTR 417 (419)
Q Consensus 387 ~~~L~~~G~~v~~~~t~~hlv~vd~~~~~~~ 417 (419)
.++|+++|+.+... ...-++|+|+|.+.+.
T Consensus 372 ~~gLk~lgI~cl~s-~AGlF~wvDlr~lL~s 401 (471)
T KOG0256|consen 372 VEGLKALGIPCLKS-NAGLFCWVDLRKLLTS 401 (471)
T ss_pred HhhHHhcCCceeec-CCeeEEEEEhHHhcCc
Confidence 99999999999874 3456799999998763
No 262
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.65 E-value=7.9e-15 Score=146.89 Aligned_cols=256 Identities=13% Similarity=0.105 Sum_probs=165.7
Q ss_pred cccccCCCChHH-HHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHH
Q 014724 106 ELIASENFTSRA-VMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEV 184 (419)
Q Consensus 106 ~L~~sen~~~~~-V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~ 184 (419)
.+.+|+....|. .++++.+.+... + ..+.++.+.++ .+.+.++++|+.+.+ +.+.++.+|||.+++++
T Consensus 6 ~f~~gp~~~~~~~~~~~~~~~~~~~-~--------HRs~~F~~i~~-e~~~~L~~l~~~~~~-~~v~~l~GsGT~a~Eaa 74 (374)
T TIGR01365 6 CFSSGPCAKRPGWSIEELKNAPLGR-S--------HRSKLGKEKLA-EAIKKTREMLGVPAD-YLIGIVPASDTGAVEMA 74 (374)
T ss_pred CcCCCccCCCchhhHHHHhhhhccc-C--------cCCHHHHHHHH-HHHHHHHHHhCCCCC-cEEEEECCchHHHHHHH
Confidence 456677767677 666665433221 1 12345555444 577899999998543 43666778899999999
Q ss_pred HHHcc-CCCCEEEEeCCCCCccccCcccccccccccccc-ccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC
Q 014724 185 YTAIL-KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 262 (419)
Q Consensus 185 ~~all-~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~-~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~ 262 (419)
+.+++ ++||+|++.. .++..+.. +.+...|+ .++.+..+ .+..+|+++++. + +.-.++.+.+++
T Consensus 75 ~~nl~~~~g~~vLv~g-----~FG~r~~~--eia~~~g~~~v~~l~~~---~g~~~~~~~ve~--~--~~v~~vhnETST 140 (374)
T TIGR01365 75 LWSMLGCRGVDVLAWE-----SFGKGWVT--DVTKQLKLPDVRVLEAE---YGKLPDLKKVDF--K--NDVVFTWNGTTS 140 (374)
T ss_pred HHHcCCCCCCeEEEEC-----HHHHHHHH--HHHHhcCCCCcEEEcCC---CCCCCCHHHcCC--C--CCEEEecCCCch
Confidence 99999 5899999753 33332210 11234565 24554432 345789999873 1 111234455666
Q ss_pred CCcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCCCCcEEEeCCCCcCCCCCe-eEEEEeCCCcchhhHHHHhh
Q 014724 263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAIN 341 (419)
Q Consensus 263 p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~~~Div~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~ 341 (419)
+...|++++...+ +++++++|+...+|.. +.+++++|++++|.+|+|.+|.| ++++.+++ ..++++
T Consensus 141 Gv~npv~~i~~~~--~~~lliVDavSs~g~~-----~l~~d~iDv~~tgsQK~L~~ppGls~v~vs~~------Al~~~~ 207 (374)
T TIGR01365 141 GVRVPNGDFIPAD--REGLTICDATSAAFAQ-----DLDYHKLDVVTFSWQKVLGGEGAHGMLILSPR------AVARLE 207 (374)
T ss_pred heecccccccccc--CCCcEEEEccchhcCC-----CCChhHCcEEEEechhccCCCCceEEEEECHH------HHHHHh
Confidence 7778887655322 5899999998554422 23334799999999999999998 78888874 222211
Q ss_pred h---------------------ccc-CCCCCCChHHHHHHHHHHHHHhcCh-HHHHHHHHHHHHHHHHHHHHHhCC-cEE
Q 014724 342 N---------------------AVF-PGLQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVELG-YKL 397 (419)
Q Consensus 342 ~---------------------~~~-~~~~g~p~~~~iaala~al~~~~~~-~~~~~~~~v~~n~~~l~~~L~~~G-~~v 397 (419)
. ... ..+..+|..+.+.++..+++.+.++ +++.+.+|+.+++++++++++++| +.+
T Consensus 208 ~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~ 287 (374)
T TIGR01365 208 SYTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHF 287 (374)
T ss_pred hcCCCCCChhhhccccccchhhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCccc
Confidence 0 000 1122355666666666677766654 689999999999999999999999 676
Q ss_pred ec
Q 014724 398 VS 399 (419)
Q Consensus 398 ~~ 399 (419)
+.
T Consensus 288 ~~ 289 (374)
T TIGR01365 288 LA 289 (374)
T ss_pred CC
Confidence 65
No 263
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.63 E-value=5.4e-14 Score=152.10 Aligned_cols=243 Identities=20% Similarity=0.258 Sum_probs=151.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccC-------C-CCEEEEeCCCCCccccCccccccccc
Q 014724 146 IDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK-------P-HDRIMGLDLPHGGHLSHGFMTPKRRV 217 (419)
Q Consensus 146 ~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~-------p-GD~Vl~~~~~~~g~~s~~~~~~~~~i 217 (419)
.+.+.+ .++++++++|.+. +.+++.+|+.|+++++.++-. + .++|+++.-.|+.+.. .+
T Consensus 542 lq~i~e-lq~~l~eLtGmd~----~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpa--------sa 608 (954)
T PRK12566 542 RAMIDE-LEAWLCAITGFDA----ICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPA--------SA 608 (954)
T ss_pred HHHHHH-HHHHHHHHHCCCe----EeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHH--------HH
Confidence 344443 4589999999998 578999999999888887632 3 3577888777766542 12
Q ss_pred cccccccEEEecccCCCCCCCCHHHHHHHhhhcCC--eEEEEcCCCCC--CcCChHHHHHHHHHhCCEEEEecccccccc
Q 014724 218 SGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRP--KLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLV 293 (419)
Q Consensus 218 ~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~p--klIi~~~s~~p--~~~dl~~I~~ia~~~ga~livD~ah~~Gl~ 293 (419)
...|. +++.+++| ++|.+|+++|+++++++++ ++|++.+|++. ...++++|+++||++|+++++|.+|..++.
T Consensus 609 ~~~Gi--eVv~Vp~D-~~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~ 685 (954)
T PRK12566 609 QMAGM--RVVIVECD-PDGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQV 685 (954)
T ss_pred HHCCC--EEEEeccC-CCCCcCHHHHHHHhhccCCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhcc
Confidence 23454 55556566 4789999999999974444 45566665544 346799999999999999999999976654
Q ss_pred ccCCcCCCCC-CCcEEEeCCCCcCCCCCe-eE-----EEEeCCCcchhhHHHHhhhcc---cCC---CCC----CChHHH
Q 014724 294 AASVVADPFK-YCDVVTTTTHKSLRGPRG-GM-----IFFKKDPVLGVELESAINNAV---FPG---LQG----GPHNHT 356 (419)
Q Consensus 294 ~~g~~~~~~~-~~Div~~S~hK~l~Gprg-G~-----i~~~~~~~~~~~l~~~i~~~~---~~~---~~g----~p~~~~ 356 (419)
. +..|-+ ++|++++++||||.+|+| |. +.+++ .+...+...- ..+ -.+ .+.+..
T Consensus 686 ~---l~~Pg~~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~------~L~pfLp~~P~~d~~G~~~r~ga~S~~~~gsa 756 (954)
T PRK12566 686 G---LARPADIGADVSHMNLHKTFCIPHGGGGPGMGPIGVRA------HLAPFVANHPVVPVEGPDPNNGAVSAAPWGSA 756 (954)
T ss_pred C---CCChhhcCCCEEEecCCcccCcCccCCCCccchhhhhh------hhhhhccCCCCcCCCCCCCCCCceeecccchH
Confidence 2 122333 899999999999988876 32 22232 2333332210 000 011 111221
Q ss_pred -HHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCC---CcceeEEEEeCCc
Q 014724 357 -IGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGG---SDNHLVLVDLRPM 414 (419)
Q Consensus 357 -iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~---t~~hlv~vd~~~~ 414 (419)
++-.+......+..++++..+....|++|+++.|.+ ++++...+ .--|-..++++++
T Consensus 757 ~~l~~A~~Yi~~lG~eLk~aa~~ailnAnYla~rL~~-~~~v~~~~~~~~~~hEfii~~~~l 817 (954)
T PRK12566 757 SILPISWMYIAMMGPQLADASEVAILSANYLANQLGG-AFPVLYRGRNERVAHECILDLRPL 817 (954)
T ss_pred HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHhHh-hCCCCcCCCCCCeeeEEEEEcccc
Confidence 111222222222233444444456789999999987 56554322 1237777888753
No 264
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.61 E-value=8.7e-14 Score=128.74 Aligned_cols=263 Identities=17% Similarity=0.220 Sum_probs=168.8
Q ss_pred hhcccccccC--CCChHHHHHHHhhhhhccCCCCCCCCCCCC-c------hhHHHHHHHHHHHHHHHHcCCCCCCCceeE
Q 014724 102 FKSLELIASE--NFTSRAVMEAVGSCLTNKYSEGLPGKRYYG-G------NEYIDELETLCQKRALAAFNLDENKWGVNV 172 (419)
Q Consensus 102 ~~~i~L~~se--n~~~~~V~eal~~~l~~~y~~g~p~~r~~~-g------~~~~~~lE~~~~~~la~~~g~~~~~~~v~V 172 (419)
+..||+.|-. ..++++.++|+-+ |.+||.--.|.. | .+.+..+- +.+++++|.|. +
T Consensus 15 r~~iNv~PiQrGGiLt~eArkal~E-----~gDGYSvCD~C~~Grldei~kPpI~~F~----~dlaeFlg~D~------~ 79 (382)
T COG1103 15 RGFINVNPIQRGGILTEEARKALLE-----WGDGYSVCDFCLEGRLDEITKPPIKDFL----EDLAEFLGMDE------V 79 (382)
T ss_pred cCccccChhhccCcCCHHHHHHHHH-----hcCCcchhhhhccCccccccCCcHHHHH----HHHHHHhCCce------e
Confidence 3557666533 3578999999864 455665433331 2 12233332 34889999986 5
Q ss_pred ecCChH-HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhh--
Q 014724 173 QPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL-- 249 (419)
Q Consensus 173 ~~~sGt-~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~-- 249 (419)
.++.|. +|-++++.+++++||-|++....|-..+ -.++..|+.+..+|- ..-.++.|++|...+.+++
T Consensus 80 R~t~GARe~KfavMhal~~~gd~vV~D~~aHYtty--------vAAEragl~v~eVp~-tg~Pey~i~~e~y~~viee~~ 150 (382)
T COG1103 80 RVTAGAREAKFAVMHALCKEGDWVVVDSLAHYTTY--------VAAERAGLNVAEVPN-TGYPEYKITPEGYAEVIEEVK 150 (382)
T ss_pred eecccchhhHHHHHHHhccCCCEEEEcCcchHHHH--------HHHHhcCCeEEecCC-CCCCceEecHHHHHHHHHHHH
Confidence 678875 7999999999999999999887653321 123556765444441 1112467888888777653
Q ss_pred -c---CCeEEEEcC--CCCCCcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCC-C-CCcEEEeCCCCcCC-CCC
Q 014724 250 -F---RPKLIIAGA--SAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-K-YCDVVTTTTHKSLR-GPR 320 (419)
Q Consensus 250 -~---~pklIi~~~--s~~p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~-~-~~Div~~S~hK~l~-Gpr 320 (419)
. .|.+.++.+ .+|+...|.+++++||+++|+.++..+|+..|.. +... + ++|++++|.||+++ .-+
T Consensus 151 ~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grm-----pvs~ke~g~DFiVgSGHKsmAAs~P 225 (382)
T COG1103 151 DEGGDPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVGRM-----PVSGKEIGADFIVGSGHKSMAASAP 225 (382)
T ss_pred hccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEeecceeeccc-----cccccccCCCEEEecCccchhccCC
Confidence 1 256666554 4677788999999999999999999999887754 2112 2 89999999999984 335
Q ss_pred eeEEEEeCCCcchhhHHHHhhhc---ccCC---------CCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHH
Q 014724 321 GGMIFFKKDPVLGVELESAINNA---VFPG---------LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALAS 388 (419)
Q Consensus 321 gG~i~~~~~~~~~~~l~~~i~~~---~~~~---------~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~ 388 (419)
.|++..+. ++.+.+-.. .++- ..|.|.+..+|++- ... +.. ..+++-.+++++|.+
T Consensus 226 iGvl~~~e------E~ae~V~r~Sg~~~~~KEvellGCT~rGapivTlmASfP----~V~-eRV-krWdeEv~kaR~fv~ 293 (382)
T COG1103 226 IGVLAMSE------EWAEIVLRRSGRAFPKKEVELLGCTVRGAPIVTLMASFP----HVV-ERV-KRWDEEVEKARWFVA 293 (382)
T ss_pred eeEEeehh------HHHHHHHhhcccccccceeeeecccccCchHHHHHhcCH----HHH-HHH-HHHHHHHHHHHHHHH
Confidence 68777776 566554221 1221 13445444444433 222 112 234455677899999
Q ss_pred HHHhCC-cEEecCCCcce
Q 014724 389 RLVELG-YKLVSGGSDNH 405 (419)
Q Consensus 389 ~L~~~G-~~v~~~~t~~h 405 (419)
.|+++| +........+|
T Consensus 294 elEkigg~~qlG~rPk~H 311 (382)
T COG1103 294 ELEKIGGVKQLGERPKNH 311 (382)
T ss_pred HHHHhhhHHHhCCCCccc
Confidence 999985 76654445566
No 265
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.61 E-value=2.8e-13 Score=131.04 Aligned_cols=231 Identities=19% Similarity=0.262 Sum_probs=126.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeC-CCCCccc-cCcccc-cccccccccc
Q 014724 146 IDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLD-LPHGGHL-SHGFMT-PKRRVSGTSI 222 (419)
Q Consensus 146 ~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~-~~~~g~~-s~~~~~-~~~~i~~~g~ 222 (419)
.+.+| +-++++||.+.+ . |-.++.|||+|+..++.++++|||+++... .+|-..- .-|.-. ....+.-.|+
T Consensus 56 Rd~le----~iyA~vfgaE~A-L-VRpq~vSGTHAi~~~Lfg~LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi 129 (403)
T PF06838_consen 56 RDKLE----RIYADVFGAEDA-L-VRPQFVSGTHAIALALFGVLRPGDELLSITGKPYDTLEEVIGIRGNGPGSLKEFGI 129 (403)
T ss_dssp HHHHH----HHHHHHCT-SEE-E-EETTS-SHHHHHHHHHHHH--TT-EEEESSSS--CCHHHHHTSSSSSSSSTGGGT-
T ss_pred HHHHH----HHHHHHhCchhh-h-hcccccchHHHHHHHHHhcCCCCCeEEEcCCCchhhHHHHhCCCCCCCCChHHhCc
Confidence 45666 458899999984 1 233567999999999999999999999653 1110000 000000 0012223455
Q ss_pred ccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCC-CCC-----CcCChHHHHHHHHHh--CCEEEEeccccccccc
Q 014724 223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS-AYP-----RDFDYPRMRQIADAV--GALLMMDMAHISGLVA 294 (419)
Q Consensus 223 ~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s-~~p-----~~~dl~~I~~ia~~~--ga~livD~ah~~Gl~~ 294 (419)
.++.++ +. +++.+|+|.+++.+++ ++|+|.+--| .|. +..+++++.+++|+. +++++||.++. .++-
T Consensus 130 ~Y~~v~--L~-~dg~~D~~~i~~~~~~-~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYG-EFvE 204 (403)
T PF06838_consen 130 KYREVP--LT-EDGTIDWEAIKKALKP-NTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYG-EFVE 204 (403)
T ss_dssp EEEE----B--TTSSB-HHHHHHHHHT-TEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTT-TTTS
T ss_pred eeEEEe--ec-CCCCcCHHHHHHhhcc-CceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcc-eecc
Confidence 555555 43 4689999999999984 8999988543 233 233566666666654 79999999953 2221
Q ss_pred cCCcCCCCC-CCcEEEeCCCCcCCC---CCeeEEEEeCCCcchhhHHHHhhhc-ccCCCC--CCChHHHHHHHHHHHHHh
Q 014724 295 ASVVADPFK-YCDVVTTTTHKSLRG---PRGGMIFFKKDPVLGVELESAINNA-VFPGLQ--GGPHNHTIGGLAVCLKHA 367 (419)
Q Consensus 295 ~g~~~~~~~-~~Div~~S~hK~l~G---prgG~i~~~~~~~~~~~l~~~i~~~-~~~~~~--g~p~~~~iaala~al~~~ 367 (419)
...|.+ ++|++.+|+=|..+| |-||+|++++ ++.++.... ..|++- .|+.....-.+...|-.+
T Consensus 205 ---~~EP~~vGADl~aGSLIKNpGGgiAptGGYIaGr~------~lVe~~a~RLTaPGiG~e~G~t~~~~R~~~QGlFlA 275 (403)
T PF06838_consen 205 ---TQEPTEVGADLMAGSLIKNPGGGIAPTGGYIAGRK------DLVERAAYRLTAPGIGKEVGATLGTNRLMFQGLFLA 275 (403)
T ss_dssp ---SS-GGGGT-SEEEEETTSGGGTTT-SS-EEEEESH------HHHHHHHHHHS-TTTGGGSS--TTTHHHHHHHHHHH
T ss_pred ---ccCccccchhheeccceeCCCCCccCcCCEEechH------HHHHHHHhhhcCCccccccccCcchHHHHHhHHhhc
Confidence 123444 899999999999854 7899999998 787765433 334431 122111111111111111
Q ss_pred cChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCC
Q 014724 368 QSPEFKVYQNKVVSNCRALASRLVELGYKLVSGG 401 (419)
Q Consensus 368 ~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~ 401 (419)
.....+-.+-+...+..++++||++.+..
T Consensus 276 -----P~vV~eAlKgaif~A~~fe~lG~~v~P~~ 304 (403)
T PF06838_consen 276 -----PHVVGEALKGAIFAAALFEKLGFEVSPKP 304 (403)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHHTT-EEES-T
T ss_pred -----hHHHHHHHHHHHHHHHHHHHcCCcCCCCC
Confidence 22334444556667777888999998743
No 266
>PRK08354 putative aminotransferase; Provisional
Probab=99.61 E-value=4.1e-14 Score=138.95 Aligned_cols=179 Identities=16% Similarity=0.086 Sum_probs=122.7
Q ss_pred hcccccccCCC-ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCCh-HHH
Q 014724 103 KSLELIASENF-TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-SPA 180 (419)
Q Consensus 103 ~~i~L~~sen~-~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sG-t~A 180 (419)
+.|+|..++|+ .|+.+++++.+.+.. ..+||. + ..+ ++++++++|. +|++++| ++|
T Consensus 9 ~~i~l~~~~np~~p~~~~~a~~~~~~~--~~~yp~---~------~~l----~~~ia~~~~~-------~I~vt~G~~~a 66 (311)
T PRK08354 9 GLIDFSASVNPYPPEWLDEMFERAKEI--SGRYTY---Y------EWL----EEEFSKLFGE-------PIVITAGITEA 66 (311)
T ss_pred ceeEecCCCCCCCCHHHHHHHHHHHHH--hhcCCC---h------HHH----HHHHHHHHCC-------CEEECCCHHHH
Confidence 45778888776 478888888776532 224542 1 133 3567777772 2566777 468
Q ss_pred HHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCC
Q 014724 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS 260 (419)
Q Consensus 181 ~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s 260 (419)
+..++. ++.+||+|++++|+|.++.. .+...|. +++.+ .+|++.+++.++ +++++++++|
T Consensus 67 l~~~~~-~~~~gd~vlv~~P~y~~~~~--------~~~~~g~--~~~~~-------~~d~~~l~~~~~--~~~~vi~~~P 126 (311)
T PRK08354 67 LYLIGI-LALRDRKVIIPRHTYGEYER--------VARFFAA--RIIKG-------PNDPEKLEELVE--RNSVVFFCNP 126 (311)
T ss_pred HHHHHH-hhCCCCeEEEeCCCcHHHHH--------HHHHcCC--EEeec-------CCCHHHHHHhhc--CCCEEEEecC
Confidence 877664 44599999999998877642 2234454 34332 368899988875 5678888999
Q ss_pred CCCCc--C---ChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCCCCcEEEeCCCCcC--CCCCeeEEEE
Q 014724 261 AYPRD--F---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSL--RGPRGGMIFF 326 (419)
Q Consensus 261 ~~p~~--~---dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~~~Div~~S~hK~l--~GprgG~i~~ 326 (419)
+||+- . .+++|.++|+++|+++|+|+++ .++.+.+.... ..--++++|++|+| +|.|.||+++
T Consensus 127 ~NPTG~~~~~~~l~~l~~~a~~~~~~li~De~y-~~f~~~~~~~~--~~~vi~~~S~SK~~~l~GlRiG~~v~ 196 (311)
T PRK08354 127 NNPDGKFYNFKELKPLLDAVEDRNALLILDEAF-IDFVKKPESPE--GENIIKLRTFTKSYGLPGIRVGYVKG 196 (311)
T ss_pred CCCCCCccCHHHHHHHHHHhhhcCcEEEEeCcc-hhccccccccC--CCcEEEEeccHhhcCCccceeeeeee
Confidence 99962 2 4677888899999999999995 55554332111 12347899999987 7899999997
No 267
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.60 E-value=2.9e-14 Score=151.30 Aligned_cols=218 Identities=14% Similarity=0.111 Sum_probs=152.4
Q ss_pred HHHHHHHHcCCCCCCCceeEecCChH-HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEeccc
Q 014724 153 CQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 231 (419)
Q Consensus 153 ~~~~la~~~g~~~~~~~v~V~~~sGt-~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~ 231 (419)
+++.++++||.+.. .++++|| .+|.+++.+++.|||+||+...+|-+.+ |+ +.++|+ +++.+..
T Consensus 200 Ae~~aA~~fgAd~t-----yfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~-~a-------Lilsga--~PVYl~P 264 (713)
T PRK15399 200 AEEYIARTFGAEQS-----YIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLA-HL-------LMMSDV--VPIWLKP 264 (713)
T ss_pred HHHHHHHHhCCCcE-----EEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHH-HH-------HHHcCC--eeEEecc
Confidence 45788999999984 4556774 6999999999999999999998887754 32 445665 4444321
Q ss_pred C-CCC---CCCCH-----HHHHHHhhhc----CCeEEEEcCCCC-CCcCChHHHHHHHHHhCCEE-EEeccccccccccC
Q 014724 232 D-EST---GLVDY-----DMLEKTAILF----RPKLIIAGASAY-PRDFDYPRMRQIADAVGALL-MMDMAHISGLVAAS 296 (419)
Q Consensus 232 ~-~~~---~~iD~-----d~Le~~l~~~----~pklIi~~~s~~-p~~~dl~~I~~ia~~~ga~l-ivD~ah~~Gl~~~g 296 (419)
. ... +.|+. +.+++.++++ +|+.+++.+|+| +...|++.|.++| |+.+ ++|+||+.-..+..
T Consensus 265 ~~n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pTYdGi~yd~~~I~~~~---g~~~ilvDEAhgah~~F~p 341 (713)
T PRK15399 265 TRNALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTYDGLLYNTDWIKQTL---DVPSIHFDSAWVPYTHFHP 341 (713)
T ss_pred cccccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCCCCceeeCHHHHHHHh---CCCEEEEeccchhhhhcCc
Confidence 1 112 34566 8899888653 346776666664 6788999999998 5655 69999976554443
Q ss_pred CcC--CCCC---CCcEE---EeCCCCcCCCCC-eeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHh
Q 014724 297 VVA--DPFK---YCDVV---TTTTHKSLRGPR-GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHA 367 (419)
Q Consensus 297 ~~~--~~~~---~~Div---~~S~hK~l~Gpr-gG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~ 367 (419)
.++ +++. ++|.+ +.|+||++++.. +++|..+.. + + .++++.+..-...++|+...+|++-+|...+
T Consensus 342 ~~~~~sam~~~~~aD~~i~~tQStHKtL~alTQaS~iHvk~~-v---d-~~~~n~a~~m~~STSPsY~LmASLD~a~~~m 416 (713)
T PRK15399 342 IYQGKSGMSGERVPGKVIFETQSTHKMLAAFSQASLIHIKGE-Y---D-EETFNEAFMMHTSTSPSYPIVASVETAAAML 416 (713)
T ss_pred ccCCcChhhCCCCCCeeeeeeeehhccccccchheeeeecCC-C---C-HHHHHHHHHHHcCCCcHHHHHHHHHHHHHHH
Confidence 222 3332 46766 999999998884 577777552 1 1 2445544333334689999999998888777
Q ss_pred cChHHHHHHHHHHHHHHHHHHHHHhC
Q 014724 368 QSPEFKVYQNKVVSNCRALASRLVEL 393 (419)
Q Consensus 368 ~~~~~~~~~~~v~~n~~~l~~~L~~~ 393 (419)
..+..++..++..+.+..+++.|.+.
T Consensus 417 ~~~~G~~l~~~~i~~a~~fR~~l~~~ 442 (713)
T PRK15399 417 RGNPGKRLINRSVERALHFRKEVQRL 442 (713)
T ss_pred HhhhhHHHHHHHHHHHHHHHHHHHhc
Confidence 54456778888888888899998775
No 268
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.60 E-value=1e-14 Score=154.84 Aligned_cols=219 Identities=16% Similarity=0.107 Sum_probs=153.7
Q ss_pred HHHHHHHHcCCCCCCCceeEecCChH-HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEeccc
Q 014724 153 CQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 231 (419)
Q Consensus 153 ~~~~la~~~g~~~~~~~v~V~~~sGt-~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~ 231 (419)
+++.++++||.+.. .++++|| .+|.+++.+++.|||+||+...+|-+.+ |+ +.++|+ .++.+..
T Consensus 200 Ae~~AA~~fgAd~t-----yfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~-ha-------Lilsga--~PVYl~P 264 (714)
T PRK15400 200 AEEYIARVFNADRS-----YMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLT-HL-------MMMSDV--TPIYFRP 264 (714)
T ss_pred HHHHHHHHhCCCcE-----EEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHH-HH-------HHHcCC--eEEEecc
Confidence 45788999999984 4556774 6999999999999999999998877754 32 446665 4444322
Q ss_pred CC-CC---CCCC-----HHHHHHHhhhc----CCeEEEEcCCC-CCCcCChHHHHHHHHHhCCEEEEeccccccccccCC
Q 014724 232 DE-ST---GLVD-----YDMLEKTAILF----RPKLIIAGASA-YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASV 297 (419)
Q Consensus 232 ~~-~~---~~iD-----~d~Le~~l~~~----~pklIi~~~s~-~p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~ 297 (419)
.. .. +.|+ .+.+++.++++ +|+.+++.+|+ ++...|++.|.++|+.++ |++|+||+.-..+...
T Consensus 265 ~rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTYdG~~yd~~~I~~~~~~~~--ilvDEAwgah~~F~p~ 342 (714)
T PRK15400 265 TRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPI 342 (714)
T ss_pred cccccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCCCccEecCHHHHHHHhCCCC--EEEEccchhhhccCcc
Confidence 11 11 2455 89999998753 23355555555 578889999999999887 7899999765554443
Q ss_pred cC--CCCC-CC---c--EEEeCCCCcCCCCC-eeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhc
Q 014724 298 VA--DPFK-YC---D--VVTTTTHKSLRGPR-GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ 368 (419)
Q Consensus 298 ~~--~~~~-~~---D--iv~~S~hK~l~Gpr-gG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~ 368 (419)
++ +++. ++ | +++.|+||++++.. +++|..+.. + + .++++.+..-...++|+...+|++-+|...+.
T Consensus 343 ~~~~sam~~ga~~~~~i~vtQStHKtL~alTQaS~LHvkg~-v---d-~~~~n~a~~m~~STSPsY~l~ASLD~a~~~m~ 417 (714)
T PRK15400 343 YEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGD-V---N-EETFNEAYMMHTTTSPHYGIVASTETAAAMMK 417 (714)
T ss_pred cCCcChhhcCCCCCCceEEEEchhhcccchhHHhHHHHcCC-C---C-HHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHH
Confidence 32 3443 55 5 99999999998874 466655442 1 1 24455443333346889999999988877775
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhC
Q 014724 369 SPEFKVYQNKVVSNCRALASRLVEL 393 (419)
Q Consensus 369 ~~~~~~~~~~v~~n~~~l~~~L~~~ 393 (419)
.+..++..++..+.+..|++.|.+.
T Consensus 418 ~~~G~~l~~~~i~~a~~~R~~l~~~ 442 (714)
T PRK15400 418 GNAGKRLINGSIERAIKFRKEIKRL 442 (714)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHhC
Confidence 4456778888888889999999775
No 269
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.60 E-value=1.7e-13 Score=137.80 Aligned_cols=274 Identities=19% Similarity=0.168 Sum_probs=158.1
Q ss_pred hccccccc--CCC---ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCCh
Q 014724 103 KSLELIAS--ENF---TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG 177 (419)
Q Consensus 103 ~~i~L~~s--en~---~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sG 177 (419)
+.|++..+ .++ .+|.|.+++.+.+.+ +. ....+ |. .+...++ .+++++++|.+. + +.+.||
T Consensus 28 ~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~-~~--~~~~~-~~-~~~~~~l----~~~la~~~g~~~----~-~~~~sg 93 (379)
T TIGR00707 28 EYLDFVAGIAVNSLGHAHPKLVEALKEQLEK-LV--HVSNL-YY-TEPQEEL----AEKLVEHSGADR----V-FFCNSG 93 (379)
T ss_pred EEEEcCcchhhccCCCCCHHHHHHHHHHHhh-cc--ccccc-cC-CHHHHHH----HHHHHhhCCCCE----E-EEeCCc
Confidence 34666553 332 358999999887753 21 11111 22 2323344 477888898763 2 667788
Q ss_pred HHHHHHHHHHc---cC----CCCEEEEeCCCCCccccCccccccccccccccc-cEEEecccCCC-CC--CCCHHHHHHH
Q 014724 178 SPANFEVYTAI---LK----PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDES-TG--LVDYDMLEKT 246 (419)
Q Consensus 178 t~A~~~~~~al---l~----pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~-~~~v~~~~~~~-~~--~iD~d~Le~~ 246 (419)
++|+..++.++ .. +||+|+++++.+.++..... ...+.. +.....++..+ .. ..|++++++.
T Consensus 94 ~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 166 (379)
T TIGR00707 94 AEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGAL-------SATGQPKYQKGFEPLVPGFSYAPYNDIESLKKA 166 (379)
T ss_pred HHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHH-------HhcCChhhhccCCCCCCCceeeCCCCHHHHHHH
Confidence 99999888755 22 47999999987655432110 011100 00000111111 11 1289999998
Q ss_pred hhhcCCeEEEEcCCCCCC------cCChHHHHHHHHHhCCEEEEeccccccccccCCcCCC---CC-CCcEEEeCCCCcC
Q 014724 247 AILFRPKLIIAGASAYPR------DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADP---FK-YCDVVTTTTHKSL 316 (419)
Q Consensus 247 l~~~~pklIi~~~s~~p~------~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~---~~-~~Div~~S~hK~l 316 (419)
+.+ ++++|+++.++++. ..++++|.++|+++|+++++|++| .|+...+. ..+ .. ..|++ +++|++
T Consensus 167 ~~~-~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~-~~~~~~g~-~~~~~~~~~~~d~~--t~sK~~ 241 (379)
T TIGR00707 167 IDD-ETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQ-TGIGRTGK-FFAYEHYGIEPDII--TLAKGL 241 (379)
T ss_pred hhh-CeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccc-cCCCccch-hhhHHhcCCCCCEE--EEcccc
Confidence 865 78898887554432 123789999999999999999997 45543332 111 11 34665 578998
Q ss_pred -CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCc
Q 014724 317 -RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGY 395 (419)
Q Consensus 317 -~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~ 395 (419)
+|+|.|+++.++ ++.+.+.........+. +...+++...+|+.+.. ..+.+++.++++++++.|++.+.
T Consensus 242 ~~G~riG~~~~~~------~~~~~~~~~~~~~~~~~-~~~~~~aa~aaL~~~~~---~~~~~~~~~~~~~~~~~l~~~~~ 311 (379)
T TIGR00707 242 GGGVPIGATLAKE------EVAEAFTPGDHGSTFGG-NPLACAAALAVLEVIEK---ERLLENVKEKGDYFKERLEELGK 311 (379)
T ss_pred cCCcccEEEEEcH------HHHhhhcCCCCCCCCCC-CHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHHHh
Confidence 567899999886 67666654322122222 23334444446665432 24567777788888888877543
Q ss_pred EEe-c-CCCcceeEEEEeC
Q 014724 396 KLV-S-GGSDNHLVLVDLR 412 (419)
Q Consensus 396 ~v~-~-~~t~~hlv~vd~~ 412 (419)
... . ......++|+++.
T Consensus 312 ~~~~~~~~~~g~~~~~~~~ 330 (379)
T TIGR00707 312 NYPNKEVRGKGLMLGIELE 330 (379)
T ss_pred hCCCCccccCceEEEEEec
Confidence 321 0 0123456777764
No 270
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.59 E-value=3.3e-14 Score=140.41 Aligned_cols=214 Identities=20% Similarity=0.161 Sum_probs=145.7
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccc
Q 014724 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (419)
Q Consensus 142 g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g 221 (419)
|++..+.+| ..++++.|... .+.+.||..|+..++..|+++||+|+..+..|++... ++.. -....|
T Consensus 75 ~nPt~~~le----~~iaal~ga~~-----~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~--~l~~--~~~~~g 141 (409)
T KOG0053|consen 75 GNPTRDVLE----SGIAALEGAAH-----ALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLR--ILRK--FLPKFG 141 (409)
T ss_pred CCCchHHHH----HHHHHHhCCce-----EEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHH--HHHH--HHHHhC
Confidence 566667777 56778888876 2778999999999999999999999999988888642 1110 001222
Q ss_pred cccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcC
Q 014724 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (419)
Q Consensus 222 ~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~ 299 (419)
+ +.-.++ .-|++++++.+++ ++++|++..|.||+ ..|+++|+++||++|+++++|+.-..+ ...
T Consensus 142 i--e~~~vd------~~~~~~~~~~i~~-~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf~~p-----~~~ 207 (409)
T KOG0053|consen 142 G--EGDFVD------VDDLKKILKAIKE-NTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTFGSP-----YNQ 207 (409)
T ss_pred c--eeeeec------hhhHHHHHHhhcc-CceEEEEECCCCCccccccHHHHHHHHhhCCCEEEEeCCcCcc-----ccc
Confidence 2 222221 2356667777765 78999999999995 679999999999999999999983322 224
Q ss_pred CCCC-CCcEEEeCCCCcCCCCC---eeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHH
Q 014724 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 375 (419)
Q Consensus 300 ~~~~-~~Div~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~ 375 (419)
.|++ |||||+.|..|++.|-. +|.++.+.+ ++.+++...... +-+.++ .+.+.- .++.+. .+.-+
T Consensus 208 ~pL~lGADIV~hSaTKyi~Ghsdvi~G~iv~n~~-----~~~~~l~~~~~~-lg~~~~--p~~~~l-l~Rglk--tl~lR 276 (409)
T KOG0053|consen 208 DPLPLGADIVVHSATKYIGGHSDVIGGSVVLNSE-----ELASRLKFLQED-LGWCED--PFDLFL-LSRGLK--TLHLR 276 (409)
T ss_pred ChhhcCCCEEEEeeeeeecCCcceeeeEEecCcH-----HHHHHHHHHHHH-hcCCCC--HHHHHH-HhcCcc--hhhhh
Confidence 5666 79999999999998754 588888753 677666543211 111221 122211 122221 23345
Q ss_pred HHHHHHHHHHHHHHHHhC
Q 014724 376 QNKVVSNCRALASRLVEL 393 (419)
Q Consensus 376 ~~~v~~n~~~l~~~L~~~ 393 (419)
.+++.+|+..+++.|++.
T Consensus 277 i~~~~ena~~~A~~Le~~ 294 (409)
T KOG0053|consen 277 INKHSENALKIALLLEAH 294 (409)
T ss_pred HHHHHHHHHHHHHHhhhC
Confidence 677888888899999885
No 271
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.59 E-value=3.2e-14 Score=139.72 Aligned_cols=257 Identities=21% Similarity=0.228 Sum_probs=172.1
Q ss_pred CChHHHHHHHhhhhhccCCCCCCCCCCCCchhH-HHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCC
Q 014724 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEY-IDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKP 191 (419)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~-~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~p 191 (419)
++.+++.+++. +|.....+++...|+.. ..++| +..++++|.+.+ +.++-|...|...+.+++.|
T Consensus 155 ~ca~~~~~~~~-----kygl~~css~~e~G~~~~hkelE----~l~A~f~g~e~a-----~vF~mGf~TNs~~~p~l~~~ 220 (519)
T KOG1357|consen 155 PCAEASLKSFD-----KYGLSRCSSRHEAGTTEEHKELE----ELVARFLGVEDA-----IVFSMGFATNSMNIPSLLGK 220 (519)
T ss_pred cCChHHHHHHH-----HhcccccccchhcccHHHHHHHH----HHHHHhcCCcce-----EEEeccccccccCcceeecC
Confidence 34577777764 34444555555556543 25666 567889999873 67788888888899999999
Q ss_pred CCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhh---------cCC--eEEEEcCC
Q 014724 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---------FRP--KLIIAGAS 260 (419)
Q Consensus 192 GD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~---------~~p--klIi~~~s 260 (419)
|.-|+...+.|++... .+.++|+..++.. + .|.+.||+++++ ++| |++++..-
T Consensus 221 gsLIiSDelNHaSi~~--------GaRLSgAtiRVfk--H------Ndm~~LEr~Lrd~I~~gqP~Thrp~kki~iiveg 284 (519)
T KOG1357|consen 221 GSLIISDELNHASLIT--------GARLSGATTRVFR--H------NDMQGLERLLRDAIVYGQPKTHRPWKKILICVEG 284 (519)
T ss_pred Ccceeeccccchheec--------cccccCceEEEEe--c------CCHHHHHHHHHHHHhcCCCCcCCcchheeeeecc
Confidence 9999999999987653 2456776544433 3 367777777753 223 45555432
Q ss_pred CC---CCcCChHHHHHHHHHhCCEEEEeccccccccccC---CcCC---CCCCCcEEEeCCCCcCCCCCeeEEEEeCCCc
Q 014724 261 AY---PRDFDYPRMRQIADAVGALLMMDMAHISGLVAAS---VVAD---PFKYCDVVTTTTHKSLRGPRGGMIFFKKDPV 331 (419)
Q Consensus 261 ~~---p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g---~~~~---~~~~~Div~~S~hK~l~GprgG~i~~~~~~~ 331 (419)
-+ ++..++.++.++++|+.++|+.|+||..|..+.. +... ....+||+.+++.|+| |--||+|.+++
T Consensus 285 iysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSf-ga~GGyiagsk--- 360 (519)
T KOG1357|consen 285 IYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSF-GAAGGYIAGSK--- 360 (519)
T ss_pred ceeccCeecccHHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhc-ccccceecCcH---
Confidence 33 4567899999999999999999999998877432 1111 1116789999999988 55789999988
Q ss_pred chhhHHHHhhhcccCCC---CCCChHHHHHHHHHHHHHhc----ChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcc
Q 014724 332 LGVELESAINNAVFPGL---QGGPHNHTIGGLAVCLKHAQ----SPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDN 404 (419)
Q Consensus 332 ~~~~l~~~i~~~~~~~~---~g~p~~~~iaala~al~~~~----~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~ 404 (419)
++.+.+.......+ +-+|...+ -...+++.+. ....++..+++.+|+++|+..|+..||-++. ..|+
T Consensus 361 ---~lid~lrt~s~~~~yat~~sppvaq--q~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~gfivyG-~~dS 434 (519)
T KOG1357|consen 361 ---ELIDYLRTPSPSALYATSLSPPVAQ--QILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKMGFIVYG-NNDS 434 (519)
T ss_pred ---HHHhhhccCCCceeecccCChHHHH--HHHHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcCcEEEec-CCCC
Confidence 56666543221111 11222221 1223444443 2345788899999999999999999998875 3566
Q ss_pred eeEEE
Q 014724 405 HLVLV 409 (419)
Q Consensus 405 hlv~v 409 (419)
..+++
T Consensus 435 pVvpl 439 (519)
T KOG1357|consen 435 PVVPL 439 (519)
T ss_pred Cccee
Confidence 54443
No 272
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.59 E-value=3e-14 Score=137.32 Aligned_cols=164 Identities=23% Similarity=0.214 Sum_probs=121.6
Q ss_pred CCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCcccc
Q 014724 133 GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMT 212 (419)
Q Consensus 133 g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~ 212 (419)
||..+|. +|+..+.+| +|++.+-|--. .+.+.||..|+..++..++++||.|+...--|||.... +.
T Consensus 53 G~iYsRi--~NPT~~vlE----~RiAaLEGG~a-----a~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~l--f~ 119 (426)
T COG2873 53 GNIYTRI--MNPTTDVLE----ERIAALEGGVA-----ALAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNL--FS 119 (426)
T ss_pred Cceeeec--cCchHHHHH----HHHHHhhcchh-----hhhhccchHHHHHHHHHhccCCCeeEeeccccCchHHH--HH
Confidence 5655554 567788888 56777665544 26778999999999999999999999988778886431 11
Q ss_pred ccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccc
Q 014724 213 PKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHIS 290 (419)
Q Consensus 213 ~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~ 290 (419)
..+...|+ ++..+ | ..|++.+++.+++ ++|+|++..-.||. ..|+++|+++||++|+++|||..-..
T Consensus 120 --~tl~~~Gi--~v~fv--d----~~d~~~~~~aI~~-nTkavf~EtigNP~~~v~Die~ia~iAh~~gvpliVDNT~at 188 (426)
T COG2873 120 --HTLKRLGI--EVRFV--D----PDDPENFEAAIDE-NTKAVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIVDNTFAT 188 (426)
T ss_pred --HHHHhcCc--EEEEe--C----CCCHHHHHHHhCc-ccceEEEEeccCCCccccCHHHHHHHHHHcCCcEEEecCCCc
Confidence 01123444 44443 2 2579999999985 89999998877884 57999999999999999999997433
Q ss_pred cccccCCcCCCCC-CCcEEEeCCCCcCCCCC---eeEEE
Q 014724 291 GLVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIF 325 (419)
Q Consensus 291 Gl~~~g~~~~~~~-~~Div~~S~hK~l~Gpr---gG~i~ 325 (419)
. .+..|++ ++|||+.|++|++.|-- ||.|+
T Consensus 189 p-----yl~rP~~hGADIVvHS~TK~igGhGt~iGG~iV 222 (426)
T COG2873 189 P-----YLCRPIEHGADIVVHSATKYIGGHGTAIGGVIV 222 (426)
T ss_pred c-----eecchhhcCCCEEEEeecccccCCccccceEEE
Confidence 2 2346777 89999999999986542 35554
No 273
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.58 E-value=4.4e-13 Score=136.11 Aligned_cols=262 Identities=14% Similarity=0.069 Sum_probs=152.3
Q ss_pred hHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccC----
Q 014724 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK---- 190 (419)
Q Consensus 115 ~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~---- 190 (419)
+|.|.+++.+.+.+ +..+.+. .. ++...++| ++++++++.+. .+.++||++|++.++..+..
T Consensus 59 ~~~i~~a~~~~~~~-~~~~~~~---~~-~~~~~~l~----~~l~~~~~~~~-----~~~~~SGs~A~e~al~~a~~~~~~ 124 (401)
T PRK00854 59 HPKILAAMVEQAGR-LTLTSRA---FR-NDQLAPLY----EELAALTGSHK-----VLPMNSGAEAVETAIKAVRKWGYE 124 (401)
T ss_pred CHHHHHHHHHHHhh-ccccccc---cC-CHHHHHHH----HHHHhhCCCCE-----EEEeCCcHHHHHHHHHHHHHHHHh
Confidence 78899999888754 3222221 11 23334454 56778887643 37788999999999987742
Q ss_pred -----CC-CEEEEeCCCCCccccCcccccc-cccc---ccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCC
Q 014724 191 -----PH-DRIMGLDLPHGGHLSHGFMTPK-RRVS---GTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS 260 (419)
Q Consensus 191 -----pG-D~Vl~~~~~~~g~~s~~~~~~~-~~i~---~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s 260 (419)
+| ++|++.+-.+.|... +..... .... .......+..++ ..|++++++.+.+ ++++|+++++
T Consensus 125 ~~g~~~~~~~vi~~~~~~HG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~le~~i~~-~~~aii~e~~ 196 (401)
T PRK00854 125 VKGVPEGQAEIIVCADNFHGRTL-SIVGFSTDPDARGGFGPFTPGFRVVP------FGDAEALEAAITP-NTVAFLVEPI 196 (401)
T ss_pred ccCCCCCCceEEEECCCcCCccH-HHHhccCCccccccCCCCCCCeEEeC------CCCHHHHHHHhCC-CeEEEEEccc
Confidence 23 677777654323210 000000 0000 000000111111 2589999999864 7899999988
Q ss_pred CCCC--cCC----hHHHHHHHHHhCCEEEEeccccccccccCCc-C-CCCC-CCcEEEeCCCCcCC-C-CCeeEEEEeCC
Q 014724 261 AYPR--DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLR-G-PRGGMIFFKKD 329 (419)
Q Consensus 261 ~~p~--~~d----l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~-~-~~~~-~~Div~~S~hK~l~-G-prgG~i~~~~~ 329 (419)
.+++ ..+ +++|+++|++||+++|+|++|. |+...|.. . .... ..|+++. +|+|. | +++|++++++
T Consensus 197 ~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~-g~g~~g~~~~~~~~g~~~D~~~~--~K~l~gg~~~ig~v~~~~- 272 (401)
T PRK00854 197 QGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQT-GLGRTGKLLAEEHEGIEADVTLI--GKALSGGFYPVSAVLSNS- 272 (401)
T ss_pred cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCCCchHhHHhhcCCCCCEEEe--cccccCCccCeEEEEEcH-
Confidence 7763 333 8999999999999999999984 65433311 0 1112 4688776 49984 3 4789999987
Q ss_pred CcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEec-CCCcceeEE
Q 014724 330 PVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS-GGSDNHLVL 408 (419)
Q Consensus 330 ~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~-~~t~~hlv~ 408 (419)
++.+.+.......+.++ +....++...+|+.+.. ....++..++.+++.+.|++.++.... ......++.
T Consensus 273 -----~~~~~l~~~~~~~t~~~-~~~~~aa~~a~L~~l~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~g~~~~ 343 (401)
T PRK00854 273 -----EVLGVLKPGQHGSTFGG-NPLACAVARAALKVLTE---EGMIENAAEMGAYFLEGLRSIRSNIVREVRGRGLMLA 343 (401)
T ss_pred -----HHHhcccCCCCCCCCCc-CHHHHHHHHHHHHHHHH---cCHHHHHHHHHHHHHHHHHhhccCceEEEeccceEEE
Confidence 56555543222222333 33333344445655432 224677777889999999887644221 112345555
Q ss_pred EEe
Q 014724 409 VDL 411 (419)
Q Consensus 409 vd~ 411 (419)
+++
T Consensus 344 i~~ 346 (401)
T PRK00854 344 VEL 346 (401)
T ss_pred EEE
Confidence 555
No 274
>PRK07505 hypothetical protein; Provisional
Probab=99.58 E-value=3.7e-13 Score=136.88 Aligned_cols=252 Identities=15% Similarity=0.146 Sum_probs=142.0
Q ss_pred cccccccCCCC----hHHHHHHHhhhhhccCC-CCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChH
Q 014724 104 SLELIASENFT----SRAVMEAVGSCLTNKYS-EGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS 178 (419)
Q Consensus 104 ~i~L~~sen~~----~~~V~eal~~~l~~~y~-~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt 178 (419)
.|++... +++ +|+|++|+.+.+. ++. .+...++.....+... .++++++++++. . .++++||+
T Consensus 48 ~ld~~s~-~~lgl~~~p~v~~A~~~~l~-~~g~~~~~~~~~~~~~~~~~----~l~~~la~~~~~-~-----~~~~~sG~ 115 (402)
T PRK07505 48 FVNFVSC-SYLGLDTHPAIIEGAVDALK-RTGSLHLSSSRTRVRSQILK----DLEEALSELFGA-S-----VLTFTSCS 115 (402)
T ss_pred EEEeecC-CccCCCCCHHHHHHHHHHHH-HhCCCCCCccchhhhhHHHH----HHHHHHHHHhCC-C-----EEEECChH
Confidence 3666543 343 8999999999885 332 1111221111222223 345788888887 3 26678999
Q ss_pred HHHHHHHHHcc----CCCC-EEEEeC-CCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCC
Q 014724 179 PANFEVYTAIL----KPHD-RIMGLD-LPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRP 252 (419)
Q Consensus 179 ~A~~~~~~all----~pGD-~Vl~~~-~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~p 252 (419)
+|+..++..+. .+|+ .|++.+ ..|++.... ......+. +++.++. .|++++++++++ ++
T Consensus 116 ~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~------~~~~~~~~--~v~~~~~------~d~~~l~~~~~~-~~ 180 (402)
T PRK07505 116 AAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNIL------KGICADET--EVETIDH------NDLDALEDICKT-NK 180 (402)
T ss_pred HHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhh------hhhhhcCC--eEEEeCC------CCHHHHHHHHhc-CC
Confidence 99987774432 2233 244444 334332100 01111122 3344332 489999998864 56
Q ss_pred eEEEEcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccc-cCC-cC-CCC----CCCcEEEeCCCCcCCCCCeeE
Q 014724 253 KLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVA-ASV-VA-DPF----KYCDVVTTTTHKSLRGPRGGM 323 (419)
Q Consensus 253 klIi~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~-~g~-~~-~~~----~~~Div~~S~hK~l~GprgG~ 323 (419)
+++++..|+||+ ..++++|.++|++||++||+|++|..+..+ .+. .. ..+ ....++++|++|+++++ ||+
T Consensus 181 ~~~vl~~p~~~~G~~~~~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~-Gg~ 259 (402)
T PRK07505 181 TVAYVADGVYSMGGIAPVKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGAS-GGV 259 (402)
T ss_pred CEEEEEecccccCCcCCHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhcc-CeE
Confidence 788887788774 678999999999999999999998543221 111 00 011 12347789999998654 788
Q ss_pred EEEeCCCcchhhHHHHhhhcccCCCCC-CChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHH
Q 014724 324 IFFKKDPVLGVELESAINNAVFPGLQG-GPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALAS 388 (419)
Q Consensus 324 i~~~~~~~~~~~l~~~i~~~~~~~~~g-~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~ 388 (419)
++..++ ++.+.+.....+.+.+ +++....++...+++...++.+.+..+++.++.+.+.+
T Consensus 260 ~~~~~~-----~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~ 320 (402)
T PRK07505 260 IMLGDA-----EQIELILRYAGPLAFSQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDS 320 (402)
T ss_pred EEeCCH-----HHHHHHHHhCCCceeCCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHH
Confidence 776443 5666665543333332 33334444444455433333344444555555544433
No 275
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.57 E-value=2.5e-13 Score=137.46 Aligned_cols=243 Identities=15% Similarity=0.092 Sum_probs=141.9
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHc----c
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI----L 189 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~al----l 189 (419)
-+|.|.+|+.+.+.+....+ . .+ .++...+ +.++++++++.+. .+++.||++|++.++.++ .
T Consensus 48 ~~p~v~~a~~~~~~~~~~~~---~-~~-~~~~~~~----la~~l~~~~~~~~-----v~~~~sGseA~~~al~~ar~~~~ 113 (389)
T PRK01278 48 AHPHLVEALKEQAEKLWHVS---N-LY-RIPEQER----LAERLVENSFADK-----VFFTNSGAEAVECAIKTARRYHY 113 (389)
T ss_pred CCHHHHHHHHHHHHhcCccc---c-cc-CChHHHH----HHHHHHhhCCCCE-----EEEcCCcHHHHHHHHHHHHHHHH
Confidence 47899999988875422111 1 11 1222223 3366777665432 266788999999998776 4
Q ss_pred CCCC----EEEEeCCCCCccccCccccccccccccccccEEEec-ccCCCCC----CCCHHHHHHHhhhcCCeEEEEcCC
Q 014724 190 KPHD----RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPY-RLDESTG----LVDYDMLEKTAILFRPKLIIAGAS 260 (419)
Q Consensus 190 ~pGD----~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~-~~~~~~~----~iD~d~Le~~l~~~~pklIi~~~s 260 (419)
++|| +|++.++.+.|..... +...+.......+ +.. .+. ..|++++++.+++ ++++|+++..
T Consensus 114 ~~G~~~r~~vi~~~~~yhg~~~~~-------~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~l~~~l~~-~~~avivep~ 184 (389)
T PRK01278 114 GKGHPERYRIITFEGAFHGRTLAT-------IAAGGQEKYLEGFGPLV-PGFDQVPFGDIEALKAAITP-NTAAILIEPI 184 (389)
T ss_pred hcCCCCCCEEEEECCCcCCCcHHH-------HhccCChhhcccCCCCC-CCceEeCCCCHHHHHHhhCC-CeEEEEEecc
Confidence 6777 8999988765542111 1111210000000 000 111 2689999999864 7899998865
Q ss_pred CCCC------cCChHHHHHHHHHhCCEEEEeccccccccccCCcC--CCCC-CCcEEEeCCCCcC-CCCCeeEEEEeCCC
Q 014724 261 AYPR------DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSL-RGPRGGMIFFKKDP 330 (419)
Q Consensus 261 ~~p~------~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~--~~~~-~~Div~~S~hK~l-~GprgG~i~~~~~~ 330 (419)
+++. ..++++|+++|++||++||+|++|. |+...+... ..+. ..|+ .|++|++ +|++.|++++++
T Consensus 185 ~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~g~~g~~~~~~~~~~~pdi--~t~sK~l~~G~~ig~~~~~~-- 259 (389)
T PRK01278 185 QGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQC-GMGRTGKLFAHEWAGVTPDI--MAVAKGIGGGFPLGACLATE-- 259 (389)
T ss_pred cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCCcceeecccCCCCCE--EEEehhccCCcceEEEEEcH--
Confidence 4432 2368999999999999999999974 654333211 0111 2455 4678998 577899999887
Q ss_pred cchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHh
Q 014724 331 VLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE 392 (419)
Q Consensus 331 ~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~ 392 (419)
++.+.+.......+.+++ ....++...+++.+.++ .+.+++.++.+++.+.|++
T Consensus 260 ----~~~~~~~~~~~~~t~~~~-~~~~aaa~a~l~~l~~~---~~~~~~~~~~~~l~~~l~~ 313 (389)
T PRK01278 260 ----EAAKGMTPGTHGSTYGGN-PLAMAVGNAVLDVILAP---GFLDNVQRMGLYLKQKLEG 313 (389)
T ss_pred ----HHHhccCCCCCCCCCCcc-HHHHHHHHHHHHHHhhh---HHHHHHHHHHHHHHHHHHH
Confidence 566655443322333332 23333333456555322 3345555566666666654
No 276
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.56 E-value=2.8e-13 Score=132.93 Aligned_cols=235 Identities=23% Similarity=0.246 Sum_probs=158.3
Q ss_pred HHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHc----cCCC----CEEEEeCCCCCccccCcccccccccccccc
Q 014724 151 TLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI----LKPH----DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 222 (419)
Q Consensus 151 ~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~al----l~pG----D~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~ 222 (419)
...++|++++.|.+. +.+|+.+|+++-++-+..+ -..| +.||+++-.||.+.. ++.-+
T Consensus 112 ~~Lq~~L~~ITG~Da----vsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPA----------SAam~ 177 (496)
T COG1003 112 YELQEWLKEITGMDA----VSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPA----------SAAMA 177 (496)
T ss_pred HHHHHHHHHhcCCce----eeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChh----------hHhhc
Confidence 345689999999997 7799999987665555444 2233 579999988887642 33334
Q ss_pred ccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CcCChHHHHHHHHHhCCEEEEeccccccccccCCcCC
Q 014724 223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD 300 (419)
Q Consensus 223 ~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p--~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~ 300 (419)
+++++.++++ ++|.+|+|+|++++.+ +...+.+.+|++- ...++.+|++|.|++|..|+.|.|...++++. ..
T Consensus 178 G~~VV~V~~~-~~G~VDlddLk~k~~~-~~AalMiTnPsT~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~---~r 252 (496)
T COG1003 178 GFKVVVVKCD-ENGNVDLDDLRAKAED-NLAALMITNPSTLGVFEEDIREICEIVHEAGGQVYYDGANLNAIVGL---AR 252 (496)
T ss_pred CceEEEEecC-CCCCccHHHHHHHhcc-ceeEEEeccCcccccchhhHHHHHHHHHHcCCEEEecCcchhhhhcc---cc
Confidence 4678887777 5799999999999984 6777777777654 46789999999999999999999976665532 23
Q ss_pred CCC-CCcEEEeCCCCcCCCCCe------eEEEEeCCCcchhhHHHHhhh----------c----------ccCCCCCCCh
Q 014724 301 PFK-YCDVVTTTTHKSLRGPRG------GMIFFKKDPVLGVELESAINN----------A----------VFPGLQGGPH 353 (419)
Q Consensus 301 ~~~-~~Div~~S~hK~l~Gprg------G~i~~~~~~~~~~~l~~~i~~----------~----------~~~~~~g~p~ 353 (419)
|-+ ++||+-..+||||..|.| |-|..++. +...+-. . +.....|+..
T Consensus 253 PGd~G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~------L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~Gs~~ 326 (496)
T COG1003 253 PGDMGFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAH------LAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYGSAS 326 (496)
T ss_pred ccccccceEEeecccccccCCCCCCCCCCceehHhh------ccccCCCCcccCCCccccccCCCCccceeeccccCcch
Confidence 334 899999999999977665 33444432 1111100 0 0000122222
Q ss_pred HHHHHHHHHH-HHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCC--cceeEEEEeCCc
Q 014724 354 NHTIGGLAVC-LKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGS--DNHLVLVDLRPM 414 (419)
Q Consensus 354 ~~~iaala~a-l~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t--~~hlv~vd~~~~ 414 (419)
+...+.+ +..+..++++...+.-.-|++|+++.|+. .|++...+. -.|-+++|++++
T Consensus 327 ---il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~-~y~~~y~~~~~~~HE~ild~r~l 386 (496)
T COG1003 327 ---ILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKG-YYPVPYTGENRVAHECILDARPL 386 (496)
T ss_pred ---HHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhh-cCccccCCCCcceeEEEeechHh
Confidence 2222323 22333345677777788899999999987 566643333 589999999854
No 277
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.56 E-value=1.3e-13 Score=129.14 Aligned_cols=256 Identities=20% Similarity=0.226 Sum_probs=164.5
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHcc-CCC
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL-KPH 192 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all-~pG 192 (419)
+..+.+++|.+.... ...|+..+...+|| ++.+++||.+. .++++|||.+|.++++.-+ +||
T Consensus 34 PTdeMr~am~eA~vg--------DdVyGeD~tt~rLE----~~vA~l~GKEA-----gLFv~SGTmgNllaIm~Hc~~rg 96 (384)
T KOG1368|consen 34 PTDEMRRAMAEASVG--------DDVYGEDPTTNRLE----QRVAELFGKEA-----GLFVPSGTMGNLLAIMVHCHQRG 96 (384)
T ss_pred ChHHHHHHHhhcccC--------cccccCCccHHHHH----HHHHHHhCccc-----eeeecccccccHHHHHHHhcCCC
Confidence 457777777654321 12244445566788 56788999887 3888999999988887665 599
Q ss_pred CEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcC-------CeEEEEcCCCC--C
Q 014724 193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFR-------PKLIIAGASAY--P 263 (419)
Q Consensus 193 D~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~-------pklIi~~~s~~--p 263 (419)
.+|++-+..|--.+-.| ....+.|. .+.++. +++++.+|++++|..+...+ +++|++.++++ +
T Consensus 97 ~eii~gd~~HI~~~E~g-----g~s~l~gv--~~~tv~-~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~G 168 (384)
T KOG1368|consen 97 SEIIVGDRAHIHRYEQG-----GISQLAGV--HVRTVK-NENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCG 168 (384)
T ss_pred ceEEeccchheeehhcc-----Chhhhccc--eeEeee-eCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccC
Confidence 99999887652111111 01124454 333443 33578999999999997432 58999987765 4
Q ss_pred -CcCC---hHHHHHHHHHhCCEEEEecccccccc-ccCCcCCCCC----CCcEEEeCCCCcCCCCCeeEEEEeCCCcchh
Q 014724 264 -RDFD---YPRMRQIADAVGALLMMDMAHISGLV-AASVVADPFK----YCDVVTTTTHKSLRGPRGGMIFFKKDPVLGV 334 (419)
Q Consensus 264 -~~~d---l~~I~~ia~~~ga~livD~ah~~Gl~-~~g~~~~~~~----~~Div~~S~hK~l~GprgG~i~~~~~~~~~~ 334 (419)
...| ++++.++|++||+.|+.|.|...... +.| .|+. .+|.|.-.+||.++.|-|.+|++++
T Consensus 169 g~vlPle~~~~v~~lak~~glkLH~DGARi~NAavasg---V~vk~i~~~fDSVsiCLSKglgAPVGSViVG~k------ 239 (384)
T KOG1368|consen 169 GKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVASG---VPVKKICSAFDSVSICLSKGLGAPVGSVIVGSK------ 239 (384)
T ss_pred ceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHcC---CCHHHHHHhhhhhhhhhhccCCCCcccEEEccH------
Confidence 4445 46788899999999999998644321 222 2232 5788888899999999999999998
Q ss_pred hHHHH---hhhcccCCCCCCChHHHHHHHHH-HHHHhcChHHHHHHHHHHHHHHHHHHHHHhCC-cEEecCCCcceeEEE
Q 014724 335 ELESA---INNAVFPGLQGGPHNHTIGGLAV-CLKHAQSPEFKVYQNKVVSNCRALASRLVELG-YKLVSGGSDNHLVLV 409 (419)
Q Consensus 335 ~l~~~---i~~~~~~~~~g~p~~~~iaala~-al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G-~~v~~~~t~~hlv~v 409 (419)
++.++ +++..- ||. .+...++. ||-.+ ++.+. ..++..+.++.+++.++..+ +++-....+++++.+
T Consensus 240 ~FI~kA~~~RKalG----GGm--RQsGvLaaaaLval-~~~~~-~L~~dHk~A~~lAe~~~~~~~i~v~v~a~etNiv~~ 311 (384)
T KOG1368|consen 240 DFIDKARHFRKALG----GGM--RQSGVLAAAALVAL-DENVP-LLRADHKRAKELAEYINTPEEIRVEVPAVETNIVNM 311 (384)
T ss_pred HHHHHHHHHHHHhc----Cch--hHHHHHHHHHHHHh-hcchH-HHHHHHHHHHHHHHHhccccceeeecchhhcceeee
Confidence 56554 333321 221 22222221 22222 22333 33444556777889998875 776655578898887
Q ss_pred Ee
Q 014724 410 DL 411 (419)
Q Consensus 410 d~ 411 (419)
.+
T Consensus 312 ~l 313 (384)
T KOG1368|consen 312 VL 313 (384)
T ss_pred ec
Confidence 65
No 278
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.55 E-value=4.2e-13 Score=133.36 Aligned_cols=265 Identities=13% Similarity=0.075 Sum_probs=169.5
Q ss_pred hcccccccCCCChHHHHHHHhhhhhccCCCCCC-CCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHH
Q 014724 103 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLP-GKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPAN 181 (419)
Q Consensus 103 ~~i~L~~sen~~~~~V~eal~~~l~~~y~~g~p-~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~ 181 (419)
..+++.||+..+|++|++++.+.+.+....|.. -.....+.++.+.++ .+.+.++++|+++.+ +.+.++.++||.++
T Consensus 4 ~~~nF~aGPa~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~-~~~~~Lr~Ll~~P~~-y~Vlfl~GggT~~~ 81 (364)
T PRK12462 4 NQLNFSGGPGALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLA-QAEADLRDLLGIPDE-YGVVFLQGGSSLQF 81 (364)
T ss_pred ccceecCCCcCCCHHHHHHHHHHHhcccccCccccccccccHHHHHHHH-HHHHHHHHHhCCCCC-CeEEEEeccHHHHH
Confidence 467899999999999999999888764332321 111123456655555 577899999999543 33656666788999
Q ss_pred HHHHHHccCCCCEEE-EeCCCCCccccCccccccccccccccccEEEecccC-CCCCCCCHHHHHHHhhhcCCeEEEEcC
Q 014724 182 FEVYTAILKPHDRIM-GLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD-ESTGLVDYDMLEKTAILFRPKLIIAGA 259 (419)
Q Consensus 182 ~~~~~all~pGD~Vl-~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~-~~~~~iD~d~Le~~l~~~~pklIi~~~ 259 (419)
.++...++++||+++ +.. .|+++..+.. .+...| .++.+.-... ..+..+++++++ +. .+++.|.+++
T Consensus 82 ea~~~Nll~~g~~~~~~~~---tG~fg~r~~~---ea~~~g-~v~~~~~~~~~~~~~~p~~~~~~--~~-~d~~~v~~t~ 151 (364)
T PRK12462 82 SMIPMNFSRPGAAAPEYVT---TGYWSRKAIG---EASRVA-AMRVVWDGAASGYRTLPSLAELD--WD-ARAPFRHYVS 151 (364)
T ss_pred HHHHHHcCCCCCcEEEEEe---CCHHHHHHHH---HHHhcC-CceEecCcCCCCCCcCCCHHHhc--cC-CCCcEEEEcc
Confidence 999999999999765 443 4555543321 112233 2333321111 012356666652 11 2456666654
Q ss_pred CC--CCCcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCCCCcEEEeCCCCcCCCCCe-eEEEEeCCCcchhhH
Q 014724 260 SA--YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVEL 336 (419)
Q Consensus 260 s~--~p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~~~Div~~S~hK~l~Gprg-G~i~~~~~~~~~~~l 336 (419)
.. ++...+ ++.+.+++++++|++...| .. +.+++..|++.++.+|+|+ |.| ++++.+++ .
T Consensus 152 NETstGv~~~-----~~~~~~~~llvvD~sS~~~--s~---pid~~~~dvi~agsQKnlg-P~Gltvvivs~~------a 214 (364)
T PRK12462 152 NETVEGLQFP-----DAAGLPDSPLIADMSSDFM--SR---PFDVEAYGMVYAHAQKNLG-PAGVTVAIIRRA------L 214 (364)
T ss_pred CCCCceEecC-----cccccCCCeEEEEcCchhh--CC---CCChHHccEEEeeccccCC-CCceEEEEECHH------H
Confidence 33 444443 3333469999999974332 11 2233355999999999995 888 77777773 3
Q ss_pred HHHhhhcc-----------cCCCCCCChHHHHHHHHHHHHHhcCh--HHHHHHHHHHHHHHHHHHHHHhCC-cE
Q 014724 337 ESAINNAV-----------FPGLQGGPHNHTIGGLAVCLKHAQSP--EFKVYQNKVVSNCRALASRLVELG-YK 396 (419)
Q Consensus 337 ~~~i~~~~-----------~~~~~g~p~~~~iaala~al~~~~~~--~~~~~~~~v~~n~~~l~~~L~~~G-~~ 396 (419)
.++..... ...+..+|....+.++..+++.+.++ +++.+.+++++.++.+++.+.+.. |.
T Consensus 215 l~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~~ 288 (364)
T PRK12462 215 LERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVI 288 (364)
T ss_pred HhhccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 22222110 01123478888888888888888766 789999999999999999999874 53
No 279
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.55 E-value=1.1e-12 Score=133.46 Aligned_cols=280 Identities=18% Similarity=0.128 Sum_probs=160.2
Q ss_pred hcccccccCC-----CChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCCh
Q 014724 103 KSLELIASEN-----FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG 177 (419)
Q Consensus 103 ~~i~L~~sen-----~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sG 177 (419)
+.|++..+.+ ..+|.|++++.+.+.. .. .++.. ....+ +...+.+.++++++.+.+ ..++++||
T Consensus 37 ~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~-~~-~~~~~--~~~~~----~~~~l~~~l~~~~~~~~~---~v~~~~sg 105 (413)
T cd00610 37 RYLDFLSGIGVLNLGHNHPEVVEALKEQLAK-LT-HFSLG--FFYNE----PAVELAELLLALTPEGLD---KVFFVNSG 105 (413)
T ss_pred EEEEcCccHHhhccCCCCHHHHHHHHHHHHh-Cc-CccCc--ccCCH----HHHHHHHHHHHhCCCCCC---EEEEcCcH
Confidence 4466655422 2579999999888742 11 12211 00122 333445788899986543 23667788
Q ss_pred HHHHHHHHHHc--cCCCCEEEEeCCCCCccccCcccccccccccccc----------ccEEEecccCC-----CCCCCCH
Q 014724 178 SPANFEVYTAI--LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI----------YFESMPYRLDE-----STGLVDY 240 (419)
Q Consensus 178 t~A~~~~~~al--l~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~----------~~~~v~~~~~~-----~~~~iD~ 240 (419)
++|+..++..+ ..++|+|++.++.+.+..... +...+. ...++.++.++ ++...|+
T Consensus 106 sea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 178 (413)
T cd00610 106 TEAVEAALKLARAYTGRKKIISFEGAYHGRTLGA-------LSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDL 178 (413)
T ss_pred HHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHH-------HHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHH
Confidence 99999999877 367899999998765542111 011110 01122333321 1134589
Q ss_pred HHHHHHhhhc--CCeEEEEcCCCCC--CcCC----hHHHHHHHHHhCCEEEEeccccccccccCCc-C-CCCC-CCcEEE
Q 014724 241 DMLEKTAILF--RPKLIIAGASAYP--RDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVT 309 (419)
Q Consensus 241 d~Le~~l~~~--~pklIi~~~s~~p--~~~d----l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~-~-~~~~-~~Div~ 309 (419)
+.|++.++++ ++++|+++..+++ ...+ +++|+++|++||+++|+|++|. |+...+.. . ...+ ..|++
T Consensus 179 ~~l~~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~-g~g~~g~~~~~~~~~~~~d~~- 256 (413)
T cd00610 179 EALEEALEEHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQT-GFGRTGKMFAFEHFGVEPDIV- 256 (413)
T ss_pred HHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCcchhhHhhcCCCCCeE-
Confidence 9999998752 4567777643332 2344 8999999999999999999974 54222211 0 1111 34665
Q ss_pred eCCCCcCC-CCCeeEEEEeCCCcchhhHHHHh--hhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHH
Q 014724 310 TTTHKSLR-GPRGGMIFFKKDPVLGVELESAI--NNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRAL 386 (419)
Q Consensus 310 ~S~hK~l~-GprgG~i~~~~~~~~~~~l~~~i--~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l 386 (419)
|++|++. |.+.|++++++ ++.+.+ .........+++. ..+++...+++.+.. ..+.+++.++.+++
T Consensus 257 -t~sK~l~~g~~~g~~~~~~------~~~~~~~~~~~~~~~t~~~~~-~~~~a~~a~l~~l~~---~~~~~~~~~~~~~l 325 (413)
T cd00610 257 -TLGKGLGGGLPLGAVLGRE------EIMDAFPAGPGLHGGTFGGNP-LACAAALAVLEVLEE---EGLLENAAELGEYL 325 (413)
T ss_pred -EEcccccCccccEEEEEcH------HHHHhhccCCCCCCCCCCcCH-HHHHHHHHHHHHHHh---ccHHHHHHHHHHHH
Confidence 5669984 56788888876 676665 2222222223322 233344445655542 34567777888888
Q ss_pred HHHHHhCCc--EEec-CCCcceeEEEEeCC
Q 014724 387 ASRLVELGY--KLVS-GGSDNHLVLVDLRP 413 (419)
Q Consensus 387 ~~~L~~~G~--~v~~-~~t~~hlv~vd~~~ 413 (419)
.+.|++.+. .+.. ......++++.+..
T Consensus 326 ~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~ 355 (413)
T cd00610 326 RERLRELAEKHPLVGDVRGRGLMIGIELVK 355 (413)
T ss_pred HHHHHHHHhhCCcEEEeecCceEEEEEEec
Confidence 888877522 2211 11234677777643
No 280
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.53 E-value=2.2e-12 Score=130.88 Aligned_cols=266 Identities=18% Similarity=0.117 Sum_probs=152.4
Q ss_pred hHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCC-C
Q 014724 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPH-D 193 (419)
Q Consensus 115 ~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pG-D 193 (419)
+|.|.+++.+.+.. +.. ...+ |.. ....+ ..++++++++.+..+ ..+++.||++|+..++..+..+| +
T Consensus 61 ~p~v~~ai~~~~~~-~~~--~~~~-~~~-~~~~~----la~~l~~~~~~~~~~--~v~~~~sgsea~~~al~~~~~~g~~ 129 (398)
T PRK03244 61 HPAVVEAVTRQLAT-LGH--VSNL-FAT-EPQIA----LAERLVELLGAPEGG--RVFFCNSGAEANEAAFKLARLTGRT 129 (398)
T ss_pred CHHHHHHHHHHHHh-ccC--ccCc-cCC-HHHHH----HHHHHHHhCCCCCCC--EEEEeCchHHHHHHHHHHHHHHCCC
Confidence 68999999887754 221 1112 221 21223 336788888854211 23556788999999998776676 4
Q ss_pred EEEEeCCCCCccccCccccccccccccccccEEEecc-cCCC-C--CCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCC
Q 014724 194 RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR-LDES-T--GLVDYDMLEKTAILFRPKLIIAGASAYPR--DFD 267 (419)
Q Consensus 194 ~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~-~~~~-~--~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~d 267 (419)
+|+..++.|.++... .+...+.......+. ...+ . ...|++++++.+. .++++|+++.+.+++ ..+
T Consensus 130 ~ii~~~~~yhg~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~aviiep~~~~~G~~~~ 201 (398)
T PRK03244 130 KIVAAEGGFHGRTMG-------ALALTGQPAKRAPFEPLPGGVEHVPYGDVDALAAAVD-DDTAAVFLEPIQGEAGVVPP 201 (398)
T ss_pred eEEEECCCcCCccHH-------HHhccCCcccccCCCCCCCCceEeCCCCHHHHHHhhc-CCeEEEEEecccCCCCCcCC
Confidence 677776665443211 011111100000000 0000 0 0148899999885 378899988766653 333
Q ss_pred ----hHHHHHHHHHhCCEEEEeccccccccccCCcC-CCC-C-CCcEEEeCCCCcC-CCCCeeEEEEeCCCcchhhHHHH
Q 014724 268 ----YPRMRQIADAVGALLMMDMAHISGLVAASVVA-DPF-K-YCDVVTTTTHKSL-RGPRGGMIFFKKDPVLGVELESA 339 (419)
Q Consensus 268 ----l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~-~~~-~-~~Div~~S~hK~l-~GprgG~i~~~~~~~~~~~l~~~ 339 (419)
+++|.++|++||+++|+|++|. |+...|... ... . ..|++ +++|+| +|.+.|+++.++ ++.+.
T Consensus 202 ~~~~l~~l~~l~~~~~~llI~DEv~~-g~gr~g~~~~~~~~~~~pDi~--t~sK~l~~G~~ig~~~~~~------~~~~~ 272 (398)
T PRK03244 202 PAGYLAAAREITDRHGALLVLDEVQT-GIGRTGAWFAHQHDGVTPDVV--TLAKGLGGGLPIGACLAFG------PAADL 272 (398)
T ss_pred CHHHHHHHHHHHHHcCCEEEEecccc-CCcccchHHhhhhhCCCCCEE--EEchhhhCCcccEEEEEcH------HHHhh
Confidence 8899999999999999999974 543333210 111 1 35766 557998 466888888887 56666
Q ss_pred hhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecC-CCcceeEEEEeC
Q 014724 340 INNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSG-GSDNHLVLVDLR 412 (419)
Q Consensus 340 i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~-~t~~hlv~vd~~ 412 (419)
+.........+++. ...++...+++.+.+ ..+.+++.+..++|.+.|++.++.++.. .....++++.+.
T Consensus 273 ~~~~~~~~t~~~~~-~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~v~g~g~~~~i~~~ 342 (398)
T PRK03244 273 LTPGLHGSTFGGNP-VACAAALAVLDTIAS---EGLLENAERLGEQLRAGIEALGHPLVDHVRGRGLLLGIVLT 342 (398)
T ss_pred ccCCCCcCCCCCCH-HHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHhcCCCceeeEeeccEEEEEEEe
Confidence 55422222233332 223333335554432 2456777778889999999876542211 124466777764
No 281
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.52 E-value=2.3e-12 Score=135.84 Aligned_cols=253 Identities=18% Similarity=0.160 Sum_probs=159.5
Q ss_pred hHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccC----C-----C------------------C---
Q 014724 144 EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK----P-----H------------------D--- 193 (419)
Q Consensus 144 ~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~----p-----G------------------D--- 193 (419)
+....+|+++-+++++++|.+. .|| +++++||.||..++.+.-+ | + |
T Consensus 119 P~~t~lE~~vi~~la~l~G~~~-~~G--~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~ 195 (608)
T TIGR03811 119 PATSQMEEEVGKEFATLMGYKN-GWG--HIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIM 195 (608)
T ss_pred chHHHHHHHHHHHHHHHhCCCC-CCe--EEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhccccccccc
Confidence 3456899999999999999986 476 4667889999876644311 0 0 0
Q ss_pred ----------------------------EEEEeCCCCCccccCcccccccccccccccc-EEEecccCCCCCCCCHHHHH
Q 014724 194 ----------------------------RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYF-ESMPYRLDESTGLVDYDMLE 244 (419)
Q Consensus 194 ----------------------------~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~-~~v~~~~~~~~~~iD~d~Le 244 (419)
+|+++.- .|++.. |.+.+.|++. .++.+++| +++.+|+++|+
T Consensus 196 ~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~---aHyS~~-----KAa~ilGlG~~~vv~VpvD-~~~rmd~~~L~ 266 (608)
T TIGR03811 196 DLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQT---KHYSWL-----KAADIIGIGLDQVIPVPVD-SNYRMDINELE 266 (608)
T ss_pred ccccccccchhhhhhhccccccccccceEEEECCC---ccHHHH-----HHHHHcCCCcccEEEeecC-CCCcCCHHHHH
Confidence 3444432 343321 3455667652 23455566 47899999999
Q ss_pred HHhhhc----CC-eEEE--EcCCCCCCcCChHHHHHHH---HHhCC--EEEEecccccccc---ccCC------------
Q 014724 245 KTAILF----RP-KLII--AGASAYPRDFDYPRMRQIA---DAVGA--LLMMDMAHISGLV---AASV------------ 297 (419)
Q Consensus 245 ~~l~~~----~p-klIi--~~~s~~p~~~dl~~I~~ia---~~~ga--~livD~ah~~Gl~---~~g~------------ 297 (419)
+.+++. .| -+|| ++++..+...|+++|+++| +++|+ |++||+|++ |.. +...
T Consensus 267 ~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyG-G~~~~l~~~~~~~~~p~~~~~~ 345 (608)
T TIGR03811 267 KIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYG-GYGRAIFLDEDDNFIPYDDLQE 345 (608)
T ss_pred HHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeecccc-chhhhhhccccccccccchhhc
Confidence 988642 23 2333 3555667788999999999 67887 699999953 421 1000
Q ss_pred -------c------C--------CCCCCCcEEEeCCCCcCCCCC-eeEEEEeCCCcchhhHHHHhhh---ccc------C
Q 014724 298 -------V------A--------DPFKYCDVVTTTTHKSLRGPR-GGMIFFKKDPVLGVELESAINN---AVF------P 346 (419)
Q Consensus 298 -------~------~--------~~~~~~Div~~S~hK~l~Gpr-gG~i~~~~~~~~~~~l~~~i~~---~~~------~ 346 (419)
+ . .-++++|.++..+||++.-|- +|.++++++ .+.+.+.. +.+ |
T Consensus 346 ~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~~Py~~G~ll~Rd~-----~~~~~~~~~a~Yl~~~~~~~p 420 (608)
T TIGR03811 346 VHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYIPYSAGGIVIQDI-----RMRDVISYFATYVFEKGADIP 420 (608)
T ss_pred ccccccccccccccccHhHHHHHhcCcCceEEEeCcccccccCCCeEEEEEeCH-----HHHHHHhcCcchhccccccCc
Confidence 0 0 012478999999999987774 488888875 34333321 111 1
Q ss_pred ------CCCCCChHHHHHHHHHHHHHh--cChHHHHHHHHHHHHHHHHHHHHHhCC-------cEE--ecCCCcceeEEE
Q 014724 347 ------GLQGGPHNHTIGGLAVCLKHA--QSPEFKVYQNKVVSNCRALASRLVELG-------YKL--VSGGSDNHLVLV 409 (419)
Q Consensus 347 ------~~~g~p~~~~iaala~al~~~--~~~~~~~~~~~v~~n~~~l~~~L~~~G-------~~v--~~~~t~~hlv~v 409 (419)
+..|+..-...+++..+++.+ ..+++.++.++..+++++|++.|.+.+ |++ +. ..+.++|.+
T Consensus 421 ~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~~~~~~~~~~el~~~~-~pdlniV~F 499 (608)
T TIGR03811 421 ALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNLEFKVGDKEIEVHPLT-KPDFNMVDY 499 (608)
T ss_pred ccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCeeEEecC-CCCcceEEE
Confidence 112222112233344566665 456789999999999999999998854 444 33 356777777
Q ss_pred EeCCcc
Q 014724 410 DLRPMV 415 (419)
Q Consensus 410 d~~~~~ 415 (419)
...+.|
T Consensus 500 r~~~~g 505 (608)
T TIGR03811 500 VFNEKG 505 (608)
T ss_pred EEecCC
Confidence 776655
No 282
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.52 E-value=2.1e-13 Score=139.71 Aligned_cols=227 Identities=18% Similarity=0.226 Sum_probs=154.1
Q ss_pred HHHHHHHHcCCCCCCCceeEecCChH-HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEeccc
Q 014724 153 CQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 231 (419)
Q Consensus 153 ~~~~la~~~g~~~~~~~v~V~~~sGt-~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~ 231 (419)
+++.+++.||.+.. .++.+|| .||.+++.+++.|||.||++..+|.++. || +.++|+ .++.+.-
T Consensus 75 Aqe~aA~~fgAd~t-----yFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~-~g-------lilaGa--~Pvyl~p 139 (557)
T COG1982 75 AQELAARVFGADHT-----YFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIH-HG-------LILAGA--TPVYLEP 139 (557)
T ss_pred HHHHHHHHhCCCce-----EEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHH-HH-------HHHcCC--ceEEecC
Confidence 45788999999985 3456665 6999999999999999999999887764 33 335565 3443221
Q ss_pred --CCC---CCCCCHHHHHHHhhhcC-C-eEEEEcCCC-CCCcCChHHHHHHHHHhCCEEEEeccccccccccCCcCC-CC
Q 014724 232 --DES---TGLVDYDMLEKTAILFR-P-KLIIAGASA-YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD-PF 302 (419)
Q Consensus 232 --~~~---~~~iD~d~Le~~l~~~~-p-klIi~~~s~-~p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~-~~ 302 (419)
++. -+.|+.+.+++.+.+++ . |++++.+|+ ++...++++|.+.+++.++|+.+|++|.+-....+..+. ..
T Consensus 140 ~~np~~gi~ggI~~~~~~~~l~~~~~~~k~~vitnpTYdGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~ 219 (557)
T COG1982 140 SRNPLYGIIGGIPLETFKEALLAHPDAEKLAVITNPTYDGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESAL 219 (557)
T ss_pred CCCccccccCCCCHHHHHHHHHhChhhheeEEEecCccceEeecHHHHHHHHhhcCceEEhhhcCcccccccccCcchhh
Confidence 221 15799999998876543 3 666655555 578889999999999999999999998544333333332 12
Q ss_pred -CCCcEEEeCCCCcCCCC-CeeEEEEeCC-CcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHH----
Q 014724 303 -KYCDVVTTTTHKSLRGP-RGGMIFFKKD-PVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY---- 375 (419)
Q Consensus 303 -~~~Div~~S~hK~l~Gp-rgG~i~~~~~-~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~---- 375 (419)
.++|+++-|+||.+++. ++.+|..++. . --.++++.+...-..++|+...+|++-+|-.+.. ...++.
T Consensus 220 ~~~~~~~tqS~HK~l~alSQaS~iHv~~~~~----~~~~r~nea~~~h~STSPsY~l~ASlD~Ar~~~~-~~G~~l~~~~ 294 (557)
T COG1982 220 NGGADFVTQSTHKLLAALSQASMIHVKDGRA----VNHERFNEALMMHQSTSPSYPLMASLDVARMQEG-NAGRELWQEV 294 (557)
T ss_pred hcCceEEEechhhhhhhhhhhHHHhhCCCcc----CCHHHHHHHHHHHccCCchHHHHHHHHHHHHhhh-hhhHHHHHHH
Confidence 27899999999999776 4577776652 1 1234455543333456888888888887544433 333343
Q ss_pred HHHHHHHHHHHHHHHHhC-CcEEec
Q 014724 376 QNKVVSNCRALASRLVEL-GYKLVS 399 (419)
Q Consensus 376 ~~~v~~n~~~l~~~L~~~-G~~v~~ 399 (419)
.+.-.+.++.+.+..++. +|+++.
T Consensus 295 ~~~~i~~r~~~~~~~~~~~~~~~~~ 319 (557)
T COG1982 295 IDEAIDFRKALRRLINEIGFFPVLQ 319 (557)
T ss_pred HHHHHHHHHHHHHHHHhcCCeeecc
Confidence 455566667777777665 466664
No 283
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.51 E-value=2.7e-12 Score=130.27 Aligned_cols=258 Identities=13% Similarity=0.104 Sum_probs=149.0
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccC---
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--- 190 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~--- 190 (419)
-+|.|.+|+.+.+.. +.... +.. .++...++ .++++++++.+. .++++||++|+..++.....
T Consensus 57 ~~p~v~~ai~~~~~~-~~~~~---~~~-~~~~~~~l----~~~l~~~~~~~~-----~~~~~SGseA~e~Alk~a~~~~~ 122 (396)
T PRK04073 57 RHPKIIQALKDQADK-VTLTS---RAF-HSDQLGPW----YEKVAKLTGKDM-----VLPMNTGAEAVETAIKAARRWAY 122 (396)
T ss_pred CCHHHHHHHHHHHhh-ccccc---ccc-CCHHHHHH----HHHHHhcCCCCe-----EEEcCChHHHHHHHHHHHHHHhh
Confidence 478999998887753 32211 111 12222233 366777776532 36788999999988876521
Q ss_pred ------CC-CEEEEeCCCCCccccCccccccccccccccc-----cE-----EEecccCCCCCCCCHHHHHHHhhhcCCe
Q 014724 191 ------PH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-----FE-----SMPYRLDESTGLVDYDMLEKTAILFRPK 253 (419)
Q Consensus 191 ------pG-D~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~-----~~-----~v~~~~~~~~~~iD~d~Le~~l~~~~pk 253 (419)
+| ++|+..+-.+.|... + .+...+.. +. ...++ ..|++++++.+.+ +++
T Consensus 123 ~~~g~~~~r~~ii~~~~~~HG~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~~~i~~-~~~ 188 (396)
T PRK04073 123 DVKGVEPNKAEIIACEGNFHGRTM-A------AVSLSSEEEYKRGFGPMLPGIKKIP------YGDLEALKAAITP-NTA 188 (396)
T ss_pred hccCCCCCCCEEEEECCCcCCCCH-H------HHhhcCCcccccCCCCCCCCceEeC------CCCHHHHHHhccc-CeE
Confidence 34 678877654333210 1 11111110 00 01111 1378999998864 788
Q ss_pred EEEEcCCCCCC--cCC----hHHHHHHHHHhCCEEEEeccccccccccCCc-C-CCCC-CCcEEEeCCCCcCCC--CCee
Q 014724 254 LIIAGASAYPR--DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLRG--PRGG 322 (419)
Q Consensus 254 lIi~~~s~~p~--~~d----l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~-~-~~~~-~~Div~~S~hK~l~G--prgG 322 (419)
+|+++.+.+++ ..+ +++|.++|++||+++|+|++|. |+...|.. . ...+ ..|+++ ++|.+++ +|.|
T Consensus 189 ~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~-g~g~~g~~~~~~~~~~~pdi~~--~sK~lg~gg~~ig 265 (396)
T PRK04073 189 AFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQT-GLGRTGKLFACDWDNVTPDMYI--LGKALGGGVFPIS 265 (396)
T ss_pred EEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchh-CCCcCcHHHHhhhcCCCCCEEE--ecccccCCCCcce
Confidence 99998876653 222 8999999999999999999974 54333321 1 1111 357765 5799843 6889
Q ss_pred EEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecC-C
Q 014724 323 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSG-G 401 (419)
Q Consensus 323 ~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~-~ 401 (419)
++++++ ++.+.+.......+.+++. ...++...+|+.+.++ .+.++..++.++|.+.|++++...+.. .
T Consensus 266 ~~~~~~------~i~~~~~~~~~~~t~~~~~-~~~aaa~aaL~~~~~~---~l~~~~~~~~~~l~~~L~~l~~~~i~~~~ 335 (396)
T PRK04073 266 CVAANR------DILGVFTPGSHGSTFGGNP-LACAVSIAALEVLEEE---KLPERSLELGEYFKEQLKEIDNPMIKEVR 335 (396)
T ss_pred EEEEcH------HHHhhhcCCCCCCCCCCCH-HHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHhhcCCccccee
Confidence 999887 6766664332222333333 3333333456654332 345666777899999998865322211 1
Q ss_pred CcceeEEEEeC
Q 014724 402 SDNHLVLVDLR 412 (419)
Q Consensus 402 t~~hlv~vd~~ 412 (419)
....++++++.
T Consensus 336 ~~g~~~~~~~~ 346 (396)
T PRK04073 336 GRGLFIGVELN 346 (396)
T ss_pred cceEEEEEEec
Confidence 23456777764
No 284
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.51 E-value=2.3e-12 Score=130.94 Aligned_cols=250 Identities=17% Similarity=0.139 Sum_probs=146.8
Q ss_pred hccccccc--CCC---ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCCh
Q 014724 103 KSLELIAS--ENF---TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG 177 (419)
Q Consensus 103 ~~i~L~~s--en~---~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sG 177 (419)
+.|++..+ .++ -+|.|.+|+.+.+.+.+..+. .+ .++...++ .++++++++.+. ..+++||
T Consensus 36 ~ylD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~---~~--~~~~~~~l----a~~L~~~~~~~~-----~~f~~SG 101 (397)
T TIGR03246 36 EYIDFAGGIAVNALGHAHPELVKALIEQADKLWHIGN---GY--TNEPVLRL----AKKLVDATFADK-----VFFCNSG 101 (397)
T ss_pred EEEECCcCHhhccCCCCCHHHHHHHHHHHHhcccccC---cc--CCHHHHHH----HHHHHhhCCCCE-----EEEeCCc
Confidence 34555543 222 479999999888864221111 11 12322333 367777776542 3678899
Q ss_pred HHHHHHHHHHcc-------C-CCCEEEEeCCC-CCccccCccccccccccccccc-----c-----EEEecccCCCCCCC
Q 014724 178 SPANFEVYTAIL-------K-PHDRIMGLDLP-HGGHLSHGFMTPKRRVSGTSIY-----F-----ESMPYRLDESTGLV 238 (419)
Q Consensus 178 t~A~~~~~~all-------~-pGD~Vl~~~~~-~~g~~s~~~~~~~~~i~~~g~~-----~-----~~v~~~~~~~~~~i 238 (419)
++|++.++.... . ..++|+..+-. ||.+. . .++..+.. + .+..++ ..
T Consensus 102 seA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~------~~ 167 (397)
T TIGR03246 102 AEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTL-F-------TVSVGGQPKYSQGFAPLPGGIKHAP------YN 167 (397)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccH-H-------HHHhcCCcccccCCCCCCCceEEeC------CC
Confidence 999999987651 1 23567766644 33321 1 11111110 0 011111 24
Q ss_pred CHHHHHHHhhhcCCeEEEEcCCCCC------CcCChHHHHHHHHHhCCEEEEeccccccccccCCcCC--CCC-CCcEEE
Q 014724 239 DYDMLEKTAILFRPKLIIAGASAYP------RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK-YCDVVT 309 (419)
Q Consensus 239 D~d~Le~~l~~~~pklIi~~~s~~p------~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~--~~~-~~Div~ 309 (419)
|++++++.+.+ ++++|+++..+.. ....+++|+++|++||+++|+|++| .|+...|.... .+. ..|++
T Consensus 168 d~~~l~~~l~~-~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~-tG~Gr~G~~~a~~~~gv~pDi~- 244 (397)
T TIGR03246 168 DLAAAKALISD-KTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQ-TGVGRTGELYAYMHYGVTPDIL- 244 (397)
T ss_pred CHHHHHHHhcc-CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechh-hcCCccccchhhhhcCCCCCEE-
Confidence 89999998864 6888888853321 1234899999999999999999998 67643332111 111 35776
Q ss_pred eCCCCcC-CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHH
Q 014724 310 TTTHKSL-RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALAS 388 (419)
Q Consensus 310 ~S~hK~l-~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~ 388 (419)
+++|.+ +|.+.|++++++ ++.+.+.......+.++. +...++...+++.+.. .+..+++.++.++|.+
T Consensus 245 -t~~K~lggG~pigav~~~~------~i~~~~~~~~~~~t~~~~-p~~~aaa~a~l~~~~~---~~l~~~~~~~~~~l~~ 313 (397)
T TIGR03246 245 -TSAKALGGGFPIGAMLTTT------EIAAHLKVGTHGTTYGGN-PLACAVAGKVLDLVNT---PELLAGVKQRHDLFVD 313 (397)
T ss_pred -EeehhhhCCcceeEEEEcH------HHHHhccCCCcCCCCCCC-HHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHH
Confidence 578999 677889888887 566666433222223322 2223333345655432 3457778888899999
Q ss_pred HHHhCC
Q 014724 389 RLVELG 394 (419)
Q Consensus 389 ~L~~~G 394 (419)
.|++++
T Consensus 314 ~L~~l~ 319 (397)
T TIGR03246 314 GLEKIN 319 (397)
T ss_pred HHHHHH
Confidence 998864
No 285
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.49 E-value=4e-12 Score=128.03 Aligned_cols=265 Identities=16% Similarity=0.127 Sum_probs=151.2
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHc-cCCC
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPH 192 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~al-l~pG 192 (419)
.+|.|.+++.+.+.+... .+..+. .+++.++.+++.+.++.+. .++++||++|+..++... ..+|
T Consensus 46 ~~p~v~~a~~~~~~~~~~---~~~~~~------~~~~~~la~~l~~~~~~~~-----~~~~~sG~~a~~~A~~~a~~~~g 111 (377)
T PRK02936 46 CHPTVTKAVQEQLDDIWH---VSNLFT------NSLQEEVASLLAENSAGDL-----VFFCNSGAEANEAALKLARKHTG 111 (377)
T ss_pred CCHHHHHHHHHHHHhccc---cccccC------CHHHHHHHHHHHhcCCCCE-----EEEeCCcHHHHHHHHHHHHHhcC
Confidence 479999999888864221 111111 1344444566666655432 366789999999998754 2344
Q ss_pred -CEEEEeCCCCCccccCcccccccccccccccc-EEEecccCCCC---CCCCHHHHHHHhhhcCCeEEEEcCCCCC----
Q 014724 193 -DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYF-ESMPYRLDEST---GLVDYDMLEKTAILFRPKLIIAGASAYP---- 263 (419)
Q Consensus 193 -D~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~-~~v~~~~~~~~---~~iD~d~Le~~l~~~~pklIi~~~s~~p---- 263 (419)
++|++.+..+.|....+ +...+... ..-..+..++. ...|++++++.+.+ ++++|+++...+.
T Consensus 112 ~~~vi~~~~~~Hg~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~ii~e~i~~~~G~~ 183 (377)
T PRK02936 112 KSKIVTFEQSFHGRTFGT-------MSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNE-EVAAVMLEVVQGEGGVI 183 (377)
T ss_pred CCeEEEECCCcCCCcHHh-------hhccCCccccccCCCCCCCceEeCCCCHHHHHHhccC-CeEEEEEecccCCCCCc
Confidence 57888876653322111 11111100 00000000000 01378999998864 6888888654322
Q ss_pred --CcCChHHHHHHHHHhCCEEEEeccccccccccCCcCC--CCC-CCcEEEeCCCCcC-CCCCeeEEEEeCCCcchhhHH
Q 014724 264 --RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK-YCDVVTTTTHKSL-RGPRGGMIFFKKDPVLGVELE 337 (419)
Q Consensus 264 --~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~--~~~-~~Div~~S~hK~l-~GprgG~i~~~~~~~~~~~l~ 337 (419)
...++++|+++|++||+++|+|++| .|+...|.... .+. ..|++ +++|++ +|.++|++++++ ++.
T Consensus 184 ~~~~~~l~~l~~l~~~~~~~lI~DEv~-~g~g~~g~~~~~~~~~~~~di~--t~sK~l~~G~~ig~v~~~~------~~~ 254 (377)
T PRK02936 184 PADPAFLQEVQTLCKKFGALLIIDEVQ-TGIGRTGTLFAYEQFGLDPDIV--TVAKGLGNGIPVGAMIGKK------ELG 254 (377)
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEeccc-cCCCcCchhhHHHhhCCCCcEE--EEcccccCCCccEEEEEcH------HHH
Confidence 1234899999999999999999997 56544332111 111 24655 589998 567899999887 676
Q ss_pred HHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC--CcEEecC-CCcceeEEEEeCC
Q 014724 338 SAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLVSG-GSDNHLVLVDLRP 413 (419)
Q Consensus 338 ~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~--G~~v~~~-~t~~hlv~vd~~~ 413 (419)
+.+.......+.++ +....++...+++.+.. +.+.+++.++.+++++.|++. ++..+.. .....++|+++..
T Consensus 255 ~~~~~~~~~~t~~~-~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~ 329 (377)
T PRK02936 255 TAFGPGSHGSTFGG-NPLAMAAAKEVLQVIKQ---PSFLEEVQEKGEYFLQKLQEELEHLECVKNIRGKGLMIGIECTE 329 (377)
T ss_pred hhccCCCCCCCCCC-CHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCcEEeEeecceEEEEEecc
Confidence 66654322222333 33334444446665432 245567777788888888763 3332210 1234678888753
No 286
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.49 E-value=7.1e-13 Score=122.10 Aligned_cols=218 Identities=19% Similarity=0.217 Sum_probs=151.3
Q ss_pred eEecCChH-HHHHHHHHHccCCC-CEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhh
Q 014724 171 NVQPLSGS-PANFEVYTAILKPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAI 248 (419)
Q Consensus 171 ~V~~~sGt-~A~~~~~~all~pG-D~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~ 248 (419)
++..+.|+ +.+.+++...+.|| |+|+...|+++.+... +...++ +++.++.++ ++.+|.|++.+.++
T Consensus 88 nic~GvGsDE~ID~iiR~~c~PGkeKIl~cPPtysMY~v~--------A~iNd~--eVvkvpl~p-dF~lnvdai~evl~ 156 (375)
T KOG0633|consen 88 NICVGVGSDELIDLIIRCVCDPGKEKILDCPPTYSMYVVD--------AAINDA--EVVKVPLNP-DFSLNVDAIAEVLE 156 (375)
T ss_pred ceEEecCcHHHHHHHHhheecCCccceeecCCcceeEEEE--------eecCCc--eEEEecCCC-CccccHHHHHHHHh
Confidence 57778887 58889999999999 8999998887665321 123444 566666664 78999999999997
Q ss_pred hc-CCeEEEEcCCCCCCc--CChHHHHHHHHHh-CCEEEEeccccccccccCCcCCCC----CCCc-EEEeCCCCcC--C
Q 014724 249 LF-RPKLIIAGASAYPRD--FDYPRMRQIADAV-GALLMMDMAHISGLVAASVVADPF----KYCD-VVTTTTHKSL--R 317 (419)
Q Consensus 249 ~~-~pklIi~~~s~~p~~--~dl~~I~~ia~~~-ga~livD~ah~~Gl~~~g~~~~~~----~~~D-iv~~S~hK~l--~ 317 (419)
.. ++|.++++.|+||+. ...+.|.+|.+.- +.++++|+|+ ..+.+. .+.+ +|.. +++.|+||+| +
T Consensus 157 ~ds~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAY-idFsg~---~S~~~lV~kYpNLivlqTlSKsfGLA 232 (375)
T KOG0633|consen 157 LDSKIKCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAY-IDFSGV---ESRMKLVKKYPNLIVLQTLSKSFGLA 232 (375)
T ss_pred ccccceEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeeee-Eeeccc---cccchHhHhCCceeehhhhhhhcCcc
Confidence 65 789999999999963 3334555555422 6899999995 333321 1222 1555 7789999986 7
Q ss_pred CCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcE
Q 014724 318 GPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYK 396 (419)
Q Consensus 318 GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~ 396 (419)
|.|.||-+++. ++.+.++....|+..+.+ ...+|++ |+..-....++.+.+.+.+.+.+|.+.|.+. ++.
T Consensus 233 GiRvG~~~~~~------~ia~iln~~KaPYNiS~~--~s~~AL~-Als~~n~kkme~~rdaiv~er~RL~keLt~v~~~~ 303 (375)
T KOG0633|consen 233 GIRVGYGAFPL------SIAEILNRAKAPYNISVA--GSVAALA-ALSDSNGKKMEDVRDAIVRERERLFKELTEVPFLN 303 (375)
T ss_pred eeEeecccccH------HHHHHHHhccCCccccch--hHHHHHH-hcCcccchHHHHHHHHHHHHHHHHHHHhhcCcccc
Confidence 88999988887 677777777666643221 1122332 2221112235677888888899999999986 454
Q ss_pred EecCCCcceeEEEEeC
Q 014724 397 LVSGGSDNHLVLVDLR 412 (419)
Q Consensus 397 v~~~~t~~hlv~vd~~ 412 (419)
-+.+|.+.+++++.+.
T Consensus 304 ~~~gg~daNFiLi~v~ 319 (375)
T KOG0633|consen 304 DYPGGSDANFILIEVT 319 (375)
T ss_pred CCCCcccccEEEEEEc
Confidence 4567899999999875
No 287
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.47 E-value=6.6e-12 Score=127.11 Aligned_cols=260 Identities=15% Similarity=0.104 Sum_probs=145.9
Q ss_pred hHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCC--
Q 014724 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPH-- 192 (419)
Q Consensus 115 ~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pG-- 192 (419)
+|.|.+++.+.+... ... ... |. .+ +.....++++++++.+. .+++.||++|+.+++..+..++
T Consensus 57 ~p~v~~a~~~~~~~~-~~~--~~~-~~-~~----~~~~la~~l~~~~~~~~-----v~~~~gg~eA~~~al~~a~~~~~~ 122 (396)
T PRK02627 57 HPKLVEAIQEQAAKL-IHT--SNL-YY-IE----PQEELAEKLVELSGMDK-----VFFCNSGAEANEAAIKLARKYGHK 122 (396)
T ss_pred CHHHHHHHHHHHhhc-ccc--ccc-cC-CH----HHHHHHHHHHhhcCCCE-----EEECCCcHHHHHHHHHHHHHHhcc
Confidence 488999988877532 111 111 11 22 33334467777777643 2566778999999998765443
Q ss_pred -----CEEEEeCCCCCccccCcccccccccccccccc-EEEecccCCCCC----CCCHHHHHHHhhhcCCeEEEEcCCCC
Q 014724 193 -----DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYF-ESMPYRLDESTG----LVDYDMLEKTAILFRPKLIIAGASAY 262 (419)
Q Consensus 193 -----D~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~-~~v~~~~~~~~~----~iD~d~Le~~l~~~~pklIi~~~s~~ 262 (419)
++|++.++.+.|.... .+...+... .....++. .+. ..|++++++.+. .++++|+++.+++
T Consensus 123 ~~~~~~~ii~~~~~yhg~~~~-------~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~l~~~i~-~~~~~vii~p~~~ 193 (396)
T PRK02627 123 KGIEKPEIITAENSFHGRTLA-------TLSATGQPKYQEGFEPLV-EGFIYVPFNDIEALKAAIT-DKTAAVMLEPIQG 193 (396)
T ss_pred cCCCCCeEEEECCCcCcccHH-------HHHhcCCccccccCCCCC-CCceEeCCCCHHHHHHhcC-CCeEEEEEecccC
Confidence 6788888765443211 011111100 00000111 111 238999999985 4789999876554
Q ss_pred CC------cCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCC---C-CCcEEEeCCCCcC-CCCCeeEEEEeCCCc
Q 014724 263 PR------DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K-YCDVVTTTTHKSL-RGPRGGMIFFKKDPV 331 (419)
Q Consensus 263 p~------~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~---~-~~Div~~S~hK~l-~GprgG~i~~~~~~~ 331 (419)
++ ...+++|.++|++||++||+|++|. |+...+.. ..+ . ..|++ |++|++ +|.|.|++++++
T Consensus 194 ~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~-g~g~~g~~-~~~~~~~~~pdi~--t~sK~~~~G~rig~~~~~~--- 266 (396)
T PRK02627 194 EGGVNPADKEYLQALRELCDENGILLILDEVQT-GMGRTGKL-FAYQHYGIEPDIM--TLAKGLGGGVPIGAVLAKE--- 266 (396)
T ss_pred CCCCccCCHHHHHHHHHHHHHcCCEEEEechhc-CCCccCce-eeehhcCCCCCEE--EEcchhhCCcccEEEEEcH---
Confidence 42 1247999999999999999999964 65433321 111 1 34655 478998 567889999887
Q ss_pred chhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCC--cEEec-CCCcceeEE
Q 014724 332 LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG--YKLVS-GGSDNHLVL 408 (419)
Q Consensus 332 ~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G--~~v~~-~~t~~hlv~ 408 (419)
++.+.+.........+++ ....++...+++.... +.+.+++.++.+++.+.|.+.. +..+. -.....++|
T Consensus 267 ---~~~~~~~~~~~~~t~~~~-~~~~~aa~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~ 339 (396)
T PRK02627 267 ---KVADVFTPGDHGSTFGGN-PLACAAALAVIEIIEE---EGLLENAAEVGEYLRAKLRELLEKYPGIKEVRGLGLMIG 339 (396)
T ss_pred ---HHHhccCCCCCCCCCCCC-HHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHHhCCCeeeeccCcEEEE
Confidence 566666432222222332 2233333445555432 2345666666777777766531 21111 012345577
Q ss_pred EEe
Q 014724 409 VDL 411 (419)
Q Consensus 409 vd~ 411 (419)
+++
T Consensus 340 i~~ 342 (396)
T PRK02627 340 IEL 342 (396)
T ss_pred EEe
Confidence 776
No 288
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.46 E-value=8.2e-12 Score=127.05 Aligned_cols=248 Identities=15% Similarity=0.121 Sum_probs=145.6
Q ss_pred ccccccc--CC---CChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChH
Q 014724 104 SLELIAS--EN---FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS 178 (419)
Q Consensus 104 ~i~L~~s--en---~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt 178 (419)
.|++..+ .+ +-+|+|.+++.+.+.+....+. ...++...++ .++++++++.+. ..+++||+
T Consensus 42 ~iD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~-----~~~~~~~~~l----~~~l~~~~~~~~-----~~~~~sGs 107 (403)
T PRK05093 42 YIDFAGGIAVTALGHCHPALVKALKEQGEKLWHISN-----VFTNEPALRL----AKKLIDATFAER-----VFFANSGA 107 (403)
T ss_pred EEEcCcCHHhccCCCCCHHHHHHHHHHHHhcCcccC-----ccCCHHHHHH----HHHHHhhCCCCE-----EEEeCchH
Confidence 4566543 22 2479999999888754221111 1122222233 356777765432 36788999
Q ss_pred HHHHHHHHHcc--------CCCCEEEEeCCC-CCccccCcccccccccccccc-----cc-----EEEecccCCCCCCCC
Q 014724 179 PANFEVYTAIL--------KPHDRIMGLDLP-HGGHLSHGFMTPKRRVSGTSI-----YF-----ESMPYRLDESTGLVD 239 (419)
Q Consensus 179 ~A~~~~~~all--------~pGD~Vl~~~~~-~~g~~s~~~~~~~~~i~~~g~-----~~-----~~v~~~~~~~~~~iD 239 (419)
+|+..++.... ...++|+..+-. ||.+. .. ++..+. .+ ....++ ..|
T Consensus 108 eA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~~------~~d 173 (403)
T PRK05093 108 EANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTL-FT-------VSVGGQPKYSDGFGPKPADITHVP------FND 173 (403)
T ss_pred HHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchh-hh-------HhhcCChhhhhcCCCCCCCcEEeC------CCC
Confidence 99999987541 123467776654 33332 10 111110 00 011111 238
Q ss_pred HHHHHHHhhhcCCeEEEEcCCCCCC-------cCChHHHHHHHHHhCCEEEEeccccccccccCCcCC--CCC-CCcEEE
Q 014724 240 YDMLEKTAILFRPKLIIAGASAYPR-------DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK-YCDVVT 309 (419)
Q Consensus 240 ~d~Le~~l~~~~pklIi~~~s~~p~-------~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~--~~~-~~Div~ 309 (419)
++++++.+.+ ++++|+++ |.+|+ ...+++|+++|++||+++|+|++|. |+...|.... .++ ..|+
T Consensus 174 ~~~l~~~l~~-~~aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~g~~g~~~~~~~~~~~pdi-- 248 (403)
T PRK05093 174 LAAVKAVIDD-HTCAVVVE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQT-GMGRTGDLFAYMHYGVTPDI-- 248 (403)
T ss_pred HHHHHHHhcC-CeEEEEEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCCCccchhhhhcCCCCCE--
Confidence 8999998864 68888888 45442 1237999999999999999999975 7654443211 011 2454
Q ss_pred eCCCCcC-CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHH
Q 014724 310 TTTHKSL-RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALAS 388 (419)
Q Consensus 310 ~S~hK~l-~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~ 388 (419)
.|++|++ +|+|.|++++++ ++.+.+.......+.+++.. ..++...+|+.+.. .++.+++.++.++|.+
T Consensus 249 ~s~sK~l~~G~rig~vv~~~------~i~~~l~~~~~~~t~~~~~~-~~~aa~a~L~~~~~---~~~~~~~~~~~~~l~~ 318 (403)
T PRK05093 249 LTSAKALGGGFPIGAMLTTA------EIASHFKVGTHGSTYGGNPL-ACAVAEAVFDIINT---PEVLEGVKARRQRFVD 318 (403)
T ss_pred EEecccccCCcceEEEEEcH------HHHhhcCCCCCCCCCCCCHH-HHHHHHHHHHHHhh---ccHHHHHHHHHHHHHH
Confidence 4678998 678999999987 67676654322233333333 33333445655432 2445677778888999
Q ss_pred HHHhCC
Q 014724 389 RLVELG 394 (419)
Q Consensus 389 ~L~~~G 394 (419)
.|++.+
T Consensus 319 ~L~~~~ 324 (403)
T PRK05093 319 GLQKIN 324 (403)
T ss_pred HHHHHH
Confidence 998864
No 289
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.43 E-value=3.1e-11 Score=122.71 Aligned_cols=244 Identities=12% Similarity=0.053 Sum_probs=143.6
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHcc----
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all---- 189 (419)
.+|+|.+|+.+.+.. +..+.+ .+ ..+...+++ +++++++|.+. .++++||++||..++..+.
T Consensus 54 ~~p~v~~a~~~~~~~-~~~~~~---~~-~~~~~~~l~----~~l~~~~~~~~-----~~~~~SGs~A~e~ai~~a~~~~~ 119 (401)
T TIGR01885 54 CHPKIVKALTEQAQK-LTLSSR---AF-YNDVFGEFA----EYVTKLFGYDK-----VLPMNTGAEAVETAIKLARKWGY 119 (401)
T ss_pred CCHHHHHHHHHHHHh-cccccc---cc-CCHHHHHHH----HHHHhhcCCCE-----EEEeCccHHHHHHHHHHHHHHhh
Confidence 479999999888753 332221 11 123233444 56778887543 3778899999999988742
Q ss_pred ------CCCCEEEEeCCCCCccccCccccccccccccccc----------cEEEecccCCCCCCCCHHHHHHHhhhc--C
Q 014724 190 ------KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY----------FESMPYRLDESTGLVDYDMLEKTAILF--R 251 (419)
Q Consensus 190 ------~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~----------~~~v~~~~~~~~~~iD~d~Le~~l~~~--~ 251 (419)
...++|+.....|.|.... .+...+.. .....++ ..|+++||+.+++. +
T Consensus 120 ~~~~~~~~~~~i~~~~~~yhg~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~le~~l~~~~~~ 186 (401)
T TIGR01885 120 KVKGIPENQAIIVSAKGNFHGRTLG-------AISMSTDPDSRTNFGPYVPGFKKIP------YNNLEALEEALEDHGPN 186 (401)
T ss_pred hhcCCCCCCCEEEEECCCcCcccHH-------HHhCcCCcccccccCCCCCCceEeC------CCCHHHHHHHHHhcCCC
Confidence 2245777777664432111 11111100 0111111 23789999988643 3
Q ss_pred CeEEEEcCCCC--CCcC----ChHHHHHHHHHhCCEEEEeccccccccccCCcCC--CCC-CCcEEEeCCCCcCCC--CC
Q 014724 252 PKLIIAGASAY--PRDF----DYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK-YCDVVTTTTHKSLRG--PR 320 (419)
Q Consensus 252 pklIi~~~s~~--p~~~----dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~--~~~-~~Div~~S~hK~l~G--pr 320 (419)
..+|++....+ +... .+++|+++|++||+++|+|++| .|+...|.... ... ..|+++. +|.+.| ++
T Consensus 187 ~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~-~g~g~~G~~~~~~~~~~~~di~~~--gK~l~~g~~~ 263 (401)
T TIGR01885 187 VCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQ-TGLGRTGKLLCVDHENVKPDIVLL--GKALSGGVYP 263 (401)
T ss_pred EEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechh-hCCCccchhhHHhhcCCCCCEEEe--eccccCCCCC
Confidence 44666654332 2222 2899999999999999999998 56543332111 111 4577764 599854 67
Q ss_pred eeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEE
Q 014724 321 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKL 397 (419)
Q Consensus 321 gG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v 397 (419)
.|+++.++ ++.+.+.......+.+++. ...++...+|+.+.++ ...+++.++.++|.+.|++++..+
T Consensus 264 ig~v~~~~------~i~~~~~~~~~~~t~~~~p-~~~~aa~a~L~~i~~~---~l~~~~~~~~~~~~~~L~~l~~~~ 330 (401)
T TIGR01885 264 VSAVLADD------DVMLTIKPGEHGSTYGGNP-LACAVAVAALEVLEEE---KLAENAEKLGEIFRDQLKKLPKPI 330 (401)
T ss_pred cEEEEEcH------HHHhhccCCCCCCCCCCCH-HHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHhccCCc
Confidence 78888886 6766665433333334333 3333334466665432 344667777899999999876444
No 290
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.42 E-value=1.9e-11 Score=124.01 Aligned_cols=245 Identities=14% Similarity=0.079 Sum_probs=139.4
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHcc----
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all---- 189 (419)
.+|.|++++.+.+.. +....+ .++ .+...+ +++.++++++.+. .++++||++|+..++..+.
T Consensus 48 ~~p~v~~a~~~~~~~-~~~~~~--~~~--~~~~~~----~~~~l~~~~~~~~-----~~~~~SGs~A~e~al~~~~~~~~ 113 (400)
T PTZ00125 48 CHPKILAALINQAQK-LTLTSR--AFY--NDVLGL----AEKYITDLFGYDK-----VLPMNSGAEAGETALKFARKWGY 113 (400)
T ss_pred CCHHHHHHHHHHHHh-cccccc--ccc--CHHHHH----HHHHHHhCCCCCE-----EEEeCCcHHHHHHHHHHHHHHHH
Confidence 589999999888743 322211 111 222233 3466777777643 3678899999999987663
Q ss_pred ------CCCCEEEEeCCCCCccccCccccccccccccccc-cEEEecccCCC---CCCCCHHHHHHHhhhcCCeEEEEcC
Q 014724 190 ------KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDES---TGLVDYDMLEKTAILFRPKLIIAGA 259 (419)
Q Consensus 190 ------~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~-~~~v~~~~~~~---~~~iD~d~Le~~l~~~~pklIi~~~ 259 (419)
..+++|+..+-.+.|.... .+...+.. ......+..+. -...|++++++.++..++++|+++.
T Consensus 114 ~~~~~~~~~~~vl~~~~~~Hg~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~v~~ep 186 (400)
T PTZ00125 114 EVKGIPENQAKIIFCNGNFSGRTIG-------ACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQDPNVAAFIVEP 186 (400)
T ss_pred hccCCCCCCCeEEEECCCcCCccHH-------HHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCCCCeEEEEEcC
Confidence 1357788776543332110 11111110 00000000000 0124899999998644788999877
Q ss_pred CCCC--CcCC----hHHHHHHHHHhCCEEEEeccccccccccCCc-CCCCC--CCcEEEeCCCCcCCC--CCeeEEEEeC
Q 014724 260 SAYP--RDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-ADPFK--YCDVVTTTTHKSLRG--PRGGMIFFKK 328 (419)
Q Consensus 260 s~~p--~~~d----l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~-~~~~~--~~Div~~S~hK~l~G--prgG~i~~~~ 328 (419)
+.++ ...+ +++|+++|++||+++|+|++| .|+...|.. ..... ..|++++ +|+|.+ ++.|++++++
T Consensus 187 ~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~-~g~g~~G~~~~~~~~~~~pd~~~~--sK~l~~g~~~ig~v~~~~ 263 (400)
T PTZ00125 187 IQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQ-TGLGRTGKLLAHDHEGVKPDIVLL--GKALSGGLYPISAVLAND 263 (400)
T ss_pred ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccc-cCCCccchhhHHHhcCCCCCEEEE--cccccCCCcCcEEEEEcH
Confidence 6555 3344 899999999999999999997 454322221 11111 3577764 599853 3789999887
Q ss_pred CCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHh
Q 014724 329 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE 392 (419)
Q Consensus 329 ~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~ 392 (419)
++.+.+.......+.+++. ...++...+++.+.+++ +.+++.+..+++.+.|++
T Consensus 264 ------~~~~~~~~~~~~~t~~~~~-~~~~aa~~~l~~i~~~~---~~~~~~~~~~~l~~~l~~ 317 (400)
T PTZ00125 264 ------DVMLVIKPGEHGSTYGGNP-LACAVAVEALEVLKEEK---LAENAQRLGEVFRDGLKE 317 (400)
T ss_pred ------HHHhhccCCCCCCCCCcCH-HHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHH
Confidence 6766665432222233332 23333334565554333 344555566777777765
No 291
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.40 E-value=1.8e-11 Score=124.74 Aligned_cols=245 Identities=19% Similarity=0.145 Sum_probs=144.3
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHcc----
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all---- 189 (419)
-+|.|.+|+.+.+..-...+ ..+. ++...+ ..++++++++.+. + .+++||++|+..++....
T Consensus 56 ~~p~v~~A~~~~~~~~~~~~---~~~~--~~~~~~----la~~l~~~~~~~~----v-~~~~sGseA~e~Alk~ar~~~~ 121 (406)
T PRK12381 56 AHPALREALNEQASKFWHTG---NGYT--NEPVLR----LAKKLIDATFADR----V-FFCNSGAEANEAALKLARKYAH 121 (406)
T ss_pred CCHHHHHHHHHHHhhccccc---CccC--CHHHHH----HHHHHHhhCCCCe----E-EEcCCcHHHHHHHHHHHHHHHh
Confidence 37899999988875322111 1111 222223 3366777766432 3 677899999999987642
Q ss_pred ----CCCCEEEEeCCCCCccccCccccccccccccccc-cE--EEecccCC-CCCCCCHHHHHHHhhhcCCeEEEEcCCC
Q 014724 190 ----KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FE--SMPYRLDE-STGLVDYDMLEKTAILFRPKLIIAGASA 261 (419)
Q Consensus 190 ----~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~-~~--~v~~~~~~-~~~~iD~d~Le~~l~~~~pklIi~~~s~ 261 (419)
.+.++|+..+..|.|... + .+...+.. +. ..++.-+. .....|++++++.+.+ ++++|+++ |.
T Consensus 122 ~~~~~~r~~ii~~~~~yHG~t~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~aaviiE-Pv 192 (406)
T PRK12381 122 DRYGSHKSGIVAFKNAFHGRTL-F------TVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALIDD-QTCAVIVE-PI 192 (406)
T ss_pred hcCCCCCCeEEEECCCcCCcch-h------HHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhccC-CeeEEEEe-CC
Confidence 245678888766544321 1 11122210 00 00000000 0113588999998864 78888885 55
Q ss_pred CCC-------cCChHHHHHHHHHhCCEEEEeccccccccccCCcCC--CCC-CCcEEEeCCCCcC-CCCCeeEEEEeCCC
Q 014724 262 YPR-------DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK-YCDVVTTTTHKSL-RGPRGGMIFFKKDP 330 (419)
Q Consensus 262 ~p~-------~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~--~~~-~~Div~~S~hK~l-~GprgG~i~~~~~~ 330 (419)
+++ ...+++|+++|++||+++|+|++| .|+...|.... .+. ..|+ .|++|++ +|.+.|++++++
T Consensus 193 ~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~-tG~gr~G~~~~~~~~~v~pDi--~t~sK~l~gG~~ig~~~~~~-- 267 (406)
T PRK12381 193 QGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQ-TGVGRTGELYAYMHYGVTPDV--LTTAKALGGGFPIGAMLTTE-- 267 (406)
T ss_pred cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchh-hCCCCCcchhhhHhhCCCCCE--EEehhhhhCCCceEEEEEcH--
Confidence 542 235789999999999999999997 67644442211 111 3465 4778999 678889999887
Q ss_pred cchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCC
Q 014724 331 VLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG 394 (419)
Q Consensus 331 ~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G 394 (419)
++.+.+.......+.+++ +...++...+++.+.. ....+++.++.++|.+.|++.+
T Consensus 268 ----~~~~~~~~~~~~~t~~~~-pl~~aaa~a~l~~l~~---~~~~~~~~~~~~~l~~~L~~l~ 323 (406)
T PRK12381 268 ----KCASVMTVGTHGTTYGGN-PLASAVAGKVLELINT---PEMLNGVKQRHDWFVERLNTIN 323 (406)
T ss_pred ----HHHhhcCCCCCCCCCCCC-HHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHH
Confidence 677766543333333332 2233333345555432 2456777788888999888754
No 292
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.39 E-value=6.9e-11 Score=121.02 Aligned_cols=259 Identities=17% Similarity=0.108 Sum_probs=142.5
Q ss_pred hcccccccC-----CCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCCh
Q 014724 103 KSLELIASE-----NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG 177 (419)
Q Consensus 103 ~~i~L~~se-----n~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sG 177 (419)
..|++..+- .+.+|.|.+|+.+.+.+.. .| ...++... ++++++++++..... + ++++||
T Consensus 49 ~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~--~~-----~~~~~~~~----~lae~l~~~~~~~~~---v-~~~~sG 113 (423)
T TIGR00713 49 EYIDYVLSWGPLILGHAHPRVVEAVKEALERGT--SY-----GAPTEAEI----LLAKEIISRVPSVEM---V-RFVNSG 113 (423)
T ss_pred EEEEccccccccccCCCCHHHHHHHHHHHHhCC--cC-----CCCCHHHH----HHHHHHHHhCCcccE---E-EEeCCH
Confidence 446665542 1468999999988886421 11 11112112 234667776654321 2 567789
Q ss_pred HHHHHHHHHHcc--CCCCEEEEeCCCCCccccCccccccccccccccc---------------cEEEecccCCCCCCCCH
Q 014724 178 SPANFEVYTAIL--KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY---------------FESMPYRLDESTGLVDY 240 (419)
Q Consensus 178 t~A~~~~~~all--~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~---------------~~~v~~~~~~~~~~iD~ 240 (419)
++|+..++.... ...++|+..++.+.|+.. +.. .+...+.. .....++ ..|+
T Consensus 114 seA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~ 182 (423)
T TIGR00713 114 TEATMSAVRLARGYTGRDKIIKFEGCYHGHHD-ALL----VKAGSGAATLGLPTSPGVPEDFAKLTLVLP------YNDL 182 (423)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEEcCCCCCChh-hhh----ccccCcccccCCCCCCCCCcccccceEEeC------CCCH
Confidence 999998886542 245899999887655421 000 00000000 0011111 1389
Q ss_pred HHHHHHhhh--cCCeEEEEc-CCCCC-CcC----ChHHHHHHHHHhCCEEEEeccccccccccCCc-CCCCC-CCcEEEe
Q 014724 241 DMLEKTAIL--FRPKLIIAG-ASAYP-RDF----DYPRMRQIADAVGALLMMDMAHISGLVAASVV-ADPFK-YCDVVTT 310 (419)
Q Consensus 241 d~Le~~l~~--~~pklIi~~-~s~~p-~~~----dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~-~~~~~-~~Div~~ 310 (419)
+++++.++. .++++|++. .++++ ... .+++|+++|++||+++|+|++| .|+...... ...+. ..|++
T Consensus 183 ~~l~~~i~~~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~-~g~r~g~~~~~~~~~~~pDi~-- 259 (423)
T TIGR00713 183 EALEEVFEEYGEEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGSLLIFDEVM-TGFRVALGGAQEYFGVEPDLT-- 259 (423)
T ss_pred HHHHHHHHHcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccc-cccccCcchhHHHhCCCcchh--
Confidence 999998864 356777775 34443 222 2789999999999999999997 565321110 01111 34654
Q ss_pred CCCCcC-CCCCeeEEEEeCCCcchhhHHHHhhhc---ccCCCCCCChHHHHHHHHHHHHHhcChHH-HHHHHHHHHHHHH
Q 014724 311 TTHKSL-RGPRGGMIFFKKDPVLGVELESAINNA---VFPGLQGGPHNHTIGGLAVCLKHAQSPEF-KVYQNKVVSNCRA 385 (419)
Q Consensus 311 S~hK~l-~GprgG~i~~~~~~~~~~~l~~~i~~~---~~~~~~g~p~~~~iaala~al~~~~~~~~-~~~~~~v~~n~~~ 385 (419)
+++|++ +|.++|++++++ ++.+.+... ....+.+++... .++...+++.+.++++ +...+.....++.
T Consensus 260 t~sK~l~~G~pig~v~~~~------~i~~~~~~~~~~~~~~T~~~~~~~-~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~ 332 (423)
T TIGR00713 260 TLGKIIGGGLPVGAFGGRR------EIMERLAPEGPVYQAGTLSGNPLA-MAAGLATLKLLDEEGVYTELDELAKRLAEG 332 (423)
T ss_pred hhhhhhcCCCceeeeeEHH------HHHHhhCcCCCeeeccCCCCCHHH-HHHHHHHHHHHhcccHHHHHHHHHHHHHHH
Confidence 689998 568899999987 677766531 112223333333 3333345665543322 3333333333444
Q ss_pred HHHHHHhCCcEE
Q 014724 386 LASRLVELGYKL 397 (419)
Q Consensus 386 l~~~L~~~G~~v 397 (419)
|.+.+++.|+..
T Consensus 333 l~~~~~~~~~~~ 344 (423)
T TIGR00713 333 LSEVLEDTGIPH 344 (423)
T ss_pred HHHHHHhcCCCe
Confidence 555555566643
No 293
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.33 E-value=1.4e-10 Score=114.37 Aligned_cols=228 Identities=16% Similarity=0.125 Sum_probs=139.3
Q ss_pred cCCCChHHHHHHHhhhhhccCCCCCCCCCCCC-chhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHc
Q 014724 110 SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYG-GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI 188 (419)
Q Consensus 110 sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~-g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~al 188 (419)
+-+..++++++++...+.. +.+- .++- ...+...+. .+.+.++.++|.+. + +++++-+.|++.++.++
T Consensus 35 G~s~~~~e~iea~~~~~~~-~v~L----e~~l~~g~~~~R~~-~~~~~~~~~~~aea----~-~ivnnn~aAVll~~~al 103 (395)
T COG1921 35 GRSLYSPEAIEAMKEAMRA-PVEL----ETDLKTGKRGARLT-ELAELLCGLTGAEA----A-AIVNNNAAAVLLTLNAL 103 (395)
T ss_pred CCccCCHHHHHHHHHHhcc-ccee----eeecccchhhHHHH-HHHHHHhcccchhh----e-eeECCcHHHHHHHHhhh
Confidence 4556789999998887643 3221 0111 112222332 22233444444444 2 45566677899999998
Q ss_pred cCCCCEEEEeCCCC-CccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEE-EEcCCCCCCc-
Q 014724 189 LKPHDRIMGLDLPH-GGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLI-IAGASAYPRD- 265 (419)
Q Consensus 189 l~pGD~Vl~~~~~~-~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklI-i~~~s~~p~~- 265 (419)
.+++..|+.--+.- |+++.-. ..+...|.+ .+.+. .++.-...+++..+.+ +++++ -+..+||+..
T Consensus 104 ~~~~EvVis~g~lV~gg~~~v~-----d~~~~aG~~--l~EvG---~tn~t~~~d~~~AIne-~ta~llkV~s~~~~f~~ 172 (395)
T COG1921 104 AEGKEVVVSRGELVEGGAFRVP-----DIIRLAGAK--LVEVG---TTNRTHLKDYELAINE-NTALLLKVHSSNYGFTG 172 (395)
T ss_pred ccCCeEEEEccccccCCCCChh-----HHHHHcCCE--EEEec---ccCcCCHHHHHHHhcc-CCeeEEEEeeccccccc
Confidence 88666665432222 3444221 234566764 44432 2345677888888876 66655 3555677643
Q ss_pred -CChHHHHHHHHHhCCEEEEeccccccccccCCc--CCCCC-CCcEEEeCCCCcCCCCCeeEEEEeCCCcchhhHHHHhh
Q 014724 266 -FDYPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAIN 341 (419)
Q Consensus 266 -~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~--~~~~~-~~Div~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i~ 341 (419)
.+.+++.+|||++|+++++|.+ +|....... ..-+. |+|+|++|.+|.|.||++|+|++++ ++.+++.
T Consensus 173 ~l~~~~l~~ia~~~~lpvivD~a--Sg~~v~~e~~l~~~la~GaDLV~~SgdKllgGPqaGii~GkK------elI~~lq 244 (395)
T COG1921 173 MLSEEELVEIAHEKGLPVIVDLA--SGALVDKEPDLREALALGADLVSFSGDKLLGGPQAGIIVGKK------ELIEKLQ 244 (395)
T ss_pred cccHHHHHHHHHHcCCCEEEecC--CccccccccchhHHHhcCCCEEEEecchhcCCCccceEechH------HHHHHHH
Confidence 4578899999999999999997 443211111 01122 8999999999999999999999999 7877765
Q ss_pred hcc--cCCCCCCChHHHHHHHHHHHHHhcCh
Q 014724 342 NAV--FPGLQGGPHNHTIGGLAVCLKHAQSP 370 (419)
Q Consensus 342 ~~~--~~~~~g~p~~~~iaala~al~~~~~~ 370 (419)
..- +..-.+. ..++++..+|+....+
T Consensus 245 ~~~l~Ralrv~K---~tla~l~~aLe~y~~~ 272 (395)
T COG1921 245 SHPLKRALRVDK---ETLAALEAALELYLQP 272 (395)
T ss_pred hhhhhhhhhcCc---HhHHHHHHHHHHHcCc
Confidence 421 1111122 2477787788776654
No 294
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.32 E-value=1e-10 Score=111.26 Aligned_cols=264 Identities=18% Similarity=0.208 Sum_probs=164.3
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHH-HHHHHHcc--C
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPAN-FEVYTAIL--K 190 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~-~~~~~all--~ 190 (419)
.|+++.....+.....|+++.-.+.......+.+ +-+.+-.+++.+.|....| |.++.++..| +.++.+.+ .
T Consensus 43 ~p~~~~a~~~q~a~deW~~~lirsw~~a~~~W~~-lp~~lgdklApLiGA~~~E----vvv~dtts~nl~k~L~aalr~~ 117 (407)
T COG3844 43 RPRAVTARLQQVATDEWGEGLIRSWNKAKADWFD-LPERLGDKLAPLIGARAGE----VVVTDTTSINLFKVLAAALRPQ 117 (407)
T ss_pred CchHHHHHHHHHHHHHHHhhhhhhhcccCCchhh-chhHHHHHhhhhhcCCCCc----eEEeCCcchHHHHHHHHHhccC
Confidence 4545555555544455554433332222223332 2334557899999999853 5556665544 45555554 4
Q ss_pred CCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CcCCh
Q 014724 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDY 268 (419)
Q Consensus 191 pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p--~~~dl 268 (419)
+|++|++.+- +++...+|.....+...+.. |++ .+.++++++++.+.+ ++.+|++++.+|- ...|+
T Consensus 118 ~~r~vIv~E~---~~fpTdly~a~g~~~~~~~~-----~~~---~~~~~P~~~~~~~~d-d~AvV~L~~V~y~TGql~dm 185 (407)
T COG3844 118 EGRRVIVSEG---DNFPTDLYIAEGLADLLGIG-----YDL---EGVIAPRALEEAITD-DVAVVLLSHVNYKTGQLLDM 185 (407)
T ss_pred CCceEEeecC---CCCCcchhhhcchhhhhccc-----ccc---eeeeChHHHHHhhcc-ceEEEEeccccccccceeeH
Confidence 6899998763 23323333222222233322 222 356888899999875 7788888877664 46799
Q ss_pred HHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcC-CCCCe-eEEEEeCCC--c---ch------
Q 014724 269 PRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSL-RGPRG-GMIFFKKDP--V---LG------ 333 (419)
Q Consensus 269 ~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l-~Gprg-G~i~~~~~~--~---~~------ 333 (419)
.+|.++||+||+++.-|-||.+|.+ +..+. ++|+.+++++|.| +||-+ ++++..++. . .+
T Consensus 186 ~aiT~~AH~~galv~wDLAHsaGav-----p~~Lh~~gaDfaigcsyKYLNgGPGapa~l~v~~~h~e~~~~~lsgW~gh 260 (407)
T COG3844 186 RAITALAHQHGALVGWDLAHSAGAV-----PVDLHAAGADFAIGCSYKYLNGGPGAPAGLFVAPRHRERSWPPLSGWWGH 260 (407)
T ss_pred HHHHHHHHhcCceEEeehhcccCCc-----ceeecccCCCeeeeeeceeccCCCCCceeEEeccccccccccccccccCC
Confidence 9999999999999999999999865 22232 8999999999999 55544 677766531 1 00
Q ss_pred ---hhHHHHhh--hcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC----CcEEec
Q 014724 334 ---VELESAIN--NAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL----GYKLVS 399 (419)
Q Consensus 334 ---~~l~~~i~--~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~----G~~v~~ 399 (419)
.++.+... ....-+.+|++.+-..+++-.+|.....-++.+.+++-...+.+|.+.++.+ ++++.+
T Consensus 261 a~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~t 335 (407)
T COG3844 261 ARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFADVDITELRKKSLALTDYFIELVEARCEYYGLTLVT 335 (407)
T ss_pred CCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhHHHHHHHHHHHhccccCCcEEec
Confidence 11111110 0111234567777777777767766555557788899999999999988774 667765
No 295
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.32 E-value=2e-10 Score=126.83 Aligned_cols=262 Identities=14% Similarity=0.118 Sum_probs=153.9
Q ss_pred CChHHHHHHHhhhhhccCCCCCCCCCCCCc--hhHHHHHHHHHHHHHHHHcCCCCCCCceeEec-CChHHHHHHHHHHc-
Q 014724 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGG--NEYIDELETLCQKRALAAFNLDENKWGVNVQP-LSGSPANFEVYTAI- 188 (419)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~g~p~~r~~~g--~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~-~sGt~A~~~~~~al- 188 (419)
++|+.|++++.+... .|. .|.+ |... ....+.+. ..|..+++++|++.+ |+.+ -++|.+.++++.++
T Consensus 116 ~~P~~v~~~i~~~~~-~~T-aytP--YqaEisQG~lqal~-~~Qt~ia~LtG~~~a----naSL~d~aTAaaea~~~a~~ 186 (993)
T PLN02414 116 HVPPVILRNILENPG-WYT-QYTP--YQAEIAQGRLESLL-NYQTMITDLTGLPMS----NASLLDEGTAAAEAMAMCNN 186 (993)
T ss_pred cCCHHHHHHHHhChH-HHh-hcCC--CchHHHHHHHHHHH-HHHHHHHHHhCCChh----hEeecCChHHHHHHHHHHHh
Confidence 478888788876542 121 1211 1111 11223344 467889999999985 3444 45577777777666
Q ss_pred cCCC--CEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCC-CCCCc
Q 014724 189 LKPH--DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS-AYPRD 265 (419)
Q Consensus 189 l~pG--D~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s-~~p~~ 265 (419)
+++| |+|++.+..|+++..... ......|. +++.++.+. .| ...+ ....+++..| .++..
T Consensus 187 ~~~g~~~~VlVs~~~hP~~~~v~~----t~a~~~Gi--eV~~v~~~~----~~------~~~~-~v~~vlvq~P~~~G~v 249 (993)
T PLN02414 187 ILKGKKKKFLIASNCHPQTIDVCQ----TRADGLGL--EVVVADEKD----FD------YSSG-DVCGVLVQYPATDGEV 249 (993)
T ss_pred cccCCCCEEEEcCccCHhHHHHHH----HhhhhcCC--EEEEecchh----hc------cccC-ceEEEEEecCCCCeEE
Confidence 5554 789999888877643211 11123344 444433321 11 1111 2223444444 45677
Q ss_pred CChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC-CCcEEEeCCCCcC-----CCCCeeEEEEeCCCcchhhHHHH
Q 014724 266 FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSL-----RGPRGGMIFFKKDPVLGVELESA 339 (419)
Q Consensus 266 ~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~-~~Div~~S~hK~l-----~GprgG~i~~~~~~~~~~~l~~~ 339 (419)
.|+++|+++||++|+++++ .++..++..- ..|-+ ++||++++.|||+ +||+.||++++++ +...
T Consensus 250 ~dv~~I~~~ah~~GaL~iV-aad~lal~~l---~~pge~GADi~vgsgqKwg~P~G~GGP~aGflavr~~------~~r~ 319 (993)
T PLN02414 250 LDYAEFVKNAHANGVKVVM-ATDLLALTML---KPPGEWGADIVVGSAQRFGVPMGYGGPHAAFLATSQE------YKRL 319 (993)
T ss_pred cCHHHHHHHHHHcCCEEEE-EECHHHhcCC---CCHhhccCcEEEECCCccccCCCCCCCCeeEEEECHH------HHhh
Confidence 8999999999999999999 7776665421 11222 8999999999997 7788899999884 3222
Q ss_pred hhh---------cccCC----C----------CCCChHHHHHHHHHHH-----HHhcChHHHHHHHHHHHHHHHHHHHHH
Q 014724 340 INN---------AVFPG----L----------QGGPHNHTIGGLAVCL-----KHAQSPEFKVYQNKVVSNCRALASRLV 391 (419)
Q Consensus 340 i~~---------~~~~~----~----------~g~p~~~~iaala~al-----~~~~~~~~~~~~~~v~~n~~~l~~~L~ 391 (419)
+.. .-.+. + .++.+..+..++.+++ ..+...++++..+++.+++.++++.|.
T Consensus 320 ~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~ 399 (993)
T PLN02414 320 MPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLK 399 (993)
T ss_pred CCCcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHh
Confidence 110 00000 0 1233332222222222 222334678888999999999999999
Q ss_pred hCCcEEecCCCcceeEEEEe
Q 014724 392 ELGYKLVSGGSDNHLVLVDL 411 (419)
Q Consensus 392 ~~G~~v~~~~t~~hlv~vd~ 411 (419)
+.|+++... ...+++.+++
T Consensus 400 ~~G~~~~~~-~~f~~vt~~~ 418 (993)
T PLN02414 400 KLGFQVQSL-PFFDTVKVKC 418 (993)
T ss_pred hcCCccCCC-CCcCeEEEec
Confidence 999988643 3345666665
No 296
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.30 E-value=6.6e-10 Score=111.94 Aligned_cols=258 Identities=15% Similarity=0.127 Sum_probs=138.8
Q ss_pred hHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHcc--CCC
Q 014724 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--KPH 192 (419)
Q Consensus 115 ~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all--~pG 192 (419)
+|+|++|+.+.+.... .++. .++ .+++. .+++.+..... + ..++++||++|+..++.... ..+
T Consensus 46 ~p~v~~a~~~~~~~~~--~~~~-~~~------~~~~~----~la~~l~~~~~-~-~~~~~~SGseA~~~Al~~ar~~~~~ 110 (375)
T PRK04260 46 HPQVQQALQKQAGLIW--HSPN-LYL------NSLQE----EVAQKLIGDKD-Y-LAFFCNSGAEANEAAIKIARKATGK 110 (375)
T ss_pred CHHHHHHHHHHHHhcC--cccC-ccC------CHHHH----HHHHHHhcCcC-C-EEEEcCccHHHHHHHHHHHHHhcCC
Confidence 6889999988875421 2221 111 13332 23333322222 1 23567889999998887652 456
Q ss_pred CEEEEeCCCCCccccCccccccccccccccc-----cEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--Cc
Q 014724 193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-----FESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RD 265 (419)
Q Consensus 193 D~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~-----~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p--~~ 265 (419)
++|++.+..+.|..... +...+.. +.. .++........|++.+++.+.+ ++++|++...+++ ..
T Consensus 111 ~~vv~~~~~yHg~~~~~-------~~~~~~~~~~~~~~~-~~~~~~~~~~~dl~~l~~~l~~-~~a~vi~e~v~~~~G~~ 181 (375)
T PRK04260 111 QEIITFQNSFHGRTFGS-------MSATGQDKIKDGFGD-GVPHFSYAIFNDLNSVKALVNK-NTAAVMLELVQGESGVL 181 (375)
T ss_pred CeEEEECCCcCcccHHH-------HhccCCcccCCCCCC-CCCCeEEeCCCCHHHHHHhcCC-CeEEEEECCeECCCCCc
Confidence 78888776643321111 1111110 000 0000000012589999998853 6778888754443 22
Q ss_pred C----ChHHHHHHHHHhCCEEEEeccccccccccCCcCC--CCC-CCcEEEeCCCCcCC-CCCeeEEEEeCCCcchhhHH
Q 014724 266 F----DYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK-YCDVVTTTTHKSLR-GPRGGMIFFKKDPVLGVELE 337 (419)
Q Consensus 266 ~----dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~--~~~-~~Div~~S~hK~l~-GprgG~i~~~~~~~~~~~l~ 337 (419)
. .+++|.++|+++|+++++|++| .|+...+.... ... ..|++ |++|+|+ |.+.|++++++ ++.
T Consensus 182 ~~~~~~l~~~~~l~~~~~~~~i~De~~-~g~g~~g~~~~~~~~~~~pdi~--t~sK~l~~G~~ig~~~~~~------~~~ 252 (375)
T PRK04260 182 PADKDFVKALADYCQETGILLIVDEVQ-TGMGRTGKLYAFEHYGIEPDIF--TLAKGLANGVPVGAMLAKS------SLG 252 (375)
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEechh-hCCCcccchhhhHhhCCCCCEE--EecccccCCcceEEEEEcH------HHH
Confidence 2 3799999999999999999997 46543332111 111 34655 7899994 67899999987 566
Q ss_pred HHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHh----CC-cEEecCCCcceeEEEEe
Q 014724 338 SAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE----LG-YKLVSGGSDNHLVLVDL 411 (419)
Q Consensus 338 ~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~----~G-~~v~~~~t~~hlv~vd~ 411 (419)
+.+.......+.+++.. ..++....++....+ .+.+++.++.+++++.|.+ .+ +..+.+ ...++|+++
T Consensus 253 ~~~~~~~~~~t~~~~~~-~~~aa~a~l~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~g~~~~~~~ 325 (375)
T PRK04260 253 GAFGYGSHGSTFGGNKL-SMAAASATLDIMLTA---GFLEQALENGNYLQEQLQKALQDKETVTTVRG--LGYMIGIET 325 (375)
T ss_pred hhcCCCCCCCCCCcCHH-HHHHHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHhhCCCeeEEec--cceEEEEEe
Confidence 66544322222333222 233333345554322 3445555555555555544 33 222221 345678776
No 297
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.27 E-value=6.1e-10 Score=114.44 Aligned_cols=255 Identities=16% Similarity=0.048 Sum_probs=133.9
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHcc--CC
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--KP 191 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all--~p 191 (419)
-+|.|.+|+.+.+.+ ...+..+. + .++... +..+++++++.-..+ ..++.+||++|+..++.... ..
T Consensus 60 ~~p~v~~a~~~q~~~-~~~~~~~~-~--~~~~~~----~la~~L~~~~~~~~~---~v~f~~SGseA~e~AlklAr~~tg 128 (433)
T PRK08117 60 RHPKVVQAIKEQADK-LMHGPSGV-I--YYESIL----KLAEELAEITPGGLD---CFFFSNSGAEAIEGALKLAKHVTK 128 (433)
T ss_pred CCHHHHHHHHHHHHh-ccCccccc-c--CCHHHH----HHHHHHHHhCCCCCC---EEEEeCcHHHHHHHHHHHHHHhcC
Confidence 478999999888754 32222121 1 112222 234677777732221 22455799999999886431 12
Q ss_pred CCEEEEeCCCCCccccCccccccc-ccccc------ccccEEEecccCC---CC------CCCCHHHHHHHhhh----cC
Q 014724 192 HDRIMGLDLPHGGHLSHGFMTPKR-RVSGT------SIYFESMPYRLDE---ST------GLVDYDMLEKTAIL----FR 251 (419)
Q Consensus 192 GD~Vl~~~~~~~g~~s~~~~~~~~-~i~~~------g~~~~~v~~~~~~---~~------~~iD~d~Le~~l~~----~~ 251 (419)
..+|+..+-.|.|.. .+...... ..... ...+..++++... .. ...|+++++++++. .+
T Consensus 129 r~~ii~~~~~yHG~t-~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 207 (433)
T PRK08117 129 RPYIISFTGCFHGRT-LGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQVTPEE 207 (433)
T ss_pred CCeEEEECCCcCCcC-HHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHHHHHHHHHhccCCCc
Confidence 356777654432221 01000000 00000 0011223322100 00 01266777777653 24
Q ss_pred CeEEEEcCC--CCCCcCC----hHHHHHHHHHhCCEEEEeccccccccccCCcC--CCCC-CCcEEEeCCCCcC-CCCCe
Q 014724 252 PKLIIAGAS--AYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSL-RGPRG 321 (419)
Q Consensus 252 pklIi~~~s--~~p~~~d----l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~--~~~~-~~Div~~S~hK~l-~Gprg 321 (419)
+.+||+..- +.+...+ +++|+++|++||+++|+|++|. |+...|... ..++ ..|+ .|++|++ .|.+.
T Consensus 208 ~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-G~gr~G~~~~~~~~gv~pDi--~t~sK~lg~G~pi 284 (433)
T PRK08117 208 VAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQT-GFGRTGEWFAAQTFGVVPDI--MTIAKGIASGLPL 284 (433)
T ss_pred EEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchh-ccCccccchhHhhcCCCCCE--eehhhhccCCCcc
Confidence 556776531 2222333 8999999999999999999985 654333211 1111 2455 5789999 56778
Q ss_pred eEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC
Q 014724 322 GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL 393 (419)
Q Consensus 322 G~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~ 393 (419)
|++++++ ++.+.+.......+.++ ++...++...+++.+..+ ...+++.++.++|.+.|+++
T Consensus 285 gav~~~~------~i~~~~~~~~~~~T~~~-np~~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~l 346 (433)
T PRK08117 285 SAVVASK------ELMEQWPLGSHGTTFGG-NPVACAAALATLEVIKEE---KLLDNANEMGAYALERLEVL 346 (433)
T ss_pred eeEEEcH------HHHhhccCCCCCCCCCc-CHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHH
Confidence 8888887 56665543323233333 233344444466655432 34566677777888888764
No 298
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.26 E-value=3.6e-10 Score=111.69 Aligned_cols=258 Identities=20% Similarity=0.178 Sum_probs=145.8
Q ss_pred hhcccccccC---CC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCC
Q 014724 102 FKSLELIASE---NF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLS 176 (419)
Q Consensus 102 ~~~i~L~~se---n~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~s 176 (419)
+..|++.++- +. .+|.+.+|+.+.+..-+..+ .-|+. + ..+ ...+++.+..+ ..+ -..+.+|
T Consensus 42 ~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h~s---n~~~~--~---~~~-~la~~L~~~s~-~~d---~vff~NS 108 (404)
T COG4992 42 REYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWHVS---NLFYN--E---PQA-ELAEKLVELSP-FAD---RVFFCNS 108 (404)
T ss_pred CEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhhcc---cccCC--h---HHH-HHHHHHHhhCc-ccc---EEEEcCC
Confidence 4557777653 22 48999999998775443211 11221 2 222 23466777776 222 1266788
Q ss_pred hHHHHHHHHHHcc---C-C-CCEEEEeCCCCCccccCccccccccccccccc-cEEEecccCCC---CCCCCHHHHHHHh
Q 014724 177 GSPANFEVYTAIL---K-P-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDES---TGLVDYDMLEKTA 247 (419)
Q Consensus 177 Gt~A~~~~~~all---~-p-GD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~-~~~v~~~~~~~---~~~iD~d~Le~~l 247 (419)
|++||++++.... . | .-+|+...-.+.|.- .+ .++..+.. +.--..|+-+. --.-|++++++++
T Consensus 109 GaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT-~g------alS~t~~~ky~~~F~Pl~~g~~~vpfnDi~al~~ai 181 (404)
T COG4992 109 GAEANEAALKLARKYTGDPEKSKIIAFENSFHGRT-LG------ALSATGQPKYRKGFGPLLPGFRHVPFNDIEALEAAI 181 (404)
T ss_pred cHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCcc-ce------eeeccCChhhccCCCCCCCCceecCCCCHHHHHHHh
Confidence 9999999986542 2 2 237777765544431 11 22333321 11000011111 0136899999999
Q ss_pred hhcCCeEEEEcCC-----CCC-CcCChHHHHHHHHHhCCEEEEeccccccccccCCcC-C-CCC-CCcEEEeCCCCcC-C
Q 014724 248 ILFRPKLIIAGAS-----AYP-RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA-D-PFK-YCDVVTTTTHKSL-R 317 (419)
Q Consensus 248 ~~~~pklIi~~~s-----~~p-~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~-~-~~~-~~Div~~S~hK~l-~ 317 (419)
.+ ++..|++..- .+| ...-+++++++|++||+++|.|++| .|+.-.|... . -.. ..||++ +-|.| .
T Consensus 182 ~~-~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQ-tG~GRTGk~fA~e~~gV~PDI~t--laK~LgG 257 (404)
T COG4992 182 DE-DTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQ-TGLGRTGKLFAYEHYGVEPDILT--LAKALGG 257 (404)
T ss_pred cc-CeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccc-cCCCccchHHHHHHhCCCCCEEE--eeccccC
Confidence 87 7888887531 122 2234799999999999999999998 4665444321 0 001 358876 46999 4
Q ss_pred CCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC
Q 014724 318 GPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL 393 (419)
Q Consensus 318 GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~ 393 (419)
|.+.|.++.++ ++.+.+.......+.||-. -..++...+++.+.+++ ..+++.+..++|.+.|+++
T Consensus 258 G~PigA~la~~------~~~~~~~~G~HgSTfGGNp-LacAv~~a~l~~l~~e~---ll~~v~~~g~~~~~~L~~l 323 (404)
T COG4992 258 GFPIGAMLATE------EIASAFTPGDHGSTFGGNP-LACAVALAVLEVLLEEG---LLENVREKGEYLLQRLREL 323 (404)
T ss_pred CccceeeEEch------hhhhcCCCCcccCCCCcCH-HHHHHHHHHHHHHcchh---HHHHHHHHHHHHHHHHHHH
Confidence 45666666664 4544444333333333322 22233334577766544 4666667778888888774
No 299
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.25 E-value=1.2e-09 Score=110.83 Aligned_cols=261 Identities=16% Similarity=0.119 Sum_probs=140.1
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHcc----
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all---- 189 (419)
-+|.|.+|+.+.+.+ ...++. .++ .+.+....+++.+..+.+. .++++||++|++.++....
T Consensus 53 ~~p~v~~a~~~q~~~-~~~~~~--~~~------~~~~~~la~~l~~~~~~~~-----v~f~~SGseA~e~Aik~ar~~~~ 118 (395)
T PRK03715 53 CNPGMVEALAAQAEK-LINPSP--AFY------NEPMAKLAGLLTQHSCFDK-----VFFANSGAEANEGAIKLARKWGR 118 (395)
T ss_pred CCHHHHHHHHHHHHh-cccccc--ccc------CHHHHHHHHHHhhccCCCE-----EEEeCCcHHHHHHHHHHHHHHhh
Confidence 378999998887753 222221 111 1333334455655543322 3677899999999987664
Q ss_pred --CCC-CEEEEeCCCCCccccCccccccccccccccc-cEEEecccCC---CCCCCCHHHHHHHhhhcCCeEEEEcCCCC
Q 014724 190 --KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDE---STGLVDYDMLEKTAILFRPKLIIAGASAY 262 (419)
Q Consensus 190 --~pG-D~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~-~~~v~~~~~~---~~~~iD~d~Le~~l~~~~pklIi~~~s~~ 262 (419)
++| ++|+..+..+.|.... .++..+.. +.....+..+ .....|++++++.+.+ ++++|++.....
T Consensus 119 ~~~~~r~~ii~~~~~yHG~t~~-------~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~aavi~Epv~~ 190 (395)
T PRK03715 119 KHKNGAYEIITFDHSFHGRTLA-------TMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLITD-KTVAVMLEPVQG 190 (395)
T ss_pred ccCCCCcEEEEECCCcCCChHH-------HHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcCC-CceEEEEeCCcC
Confidence 123 5677776554332111 12222211 0100000000 0113578999998863 677888774221
Q ss_pred --CCcCC----hHHHHHHHHHhCCEEEEeccccccccccCCc-C-CCCC-CCcEEEeCCCCcCCC-CCeeEEEEeCCCcc
Q 014724 263 --PRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLRG-PRGGMIFFKKDPVL 332 (419)
Q Consensus 263 --p~~~d----l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~-~-~~~~-~~Div~~S~hK~l~G-prgG~i~~~~~~~~ 332 (419)
+...+ +++|+++|++||+++|+|++|. |+...|.. . .-+. ..|+++ +.|.++| ...|.++++++
T Consensus 191 ~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~t-G~GRtG~~~a~~~~gv~PDi~t--~gK~lg~G~p~~av~~~~~--- 264 (395)
T PRK03715 191 EGGVIPATREFMQQLRALTKQHGLLLIVDEVQT-GCGRTGTLFAYELSGIEPDIMT--LGKGIGGGVPLAALLAKAE--- 264 (395)
T ss_pred CCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCCCcchhhHhhcCCCCceee--ehhhhhCCcceEEEEEccc---
Confidence 22223 8999999999999999999985 64322321 0 1112 458765 4699954 45666777763
Q ss_pred hhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC----CcEEecCCCcceeEE
Q 014724 333 GVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL----GYKLVSGGSDNHLVL 408 (419)
Q Consensus 333 ~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~----G~~v~~~~t~~hlv~ 408 (419)
+.. ........+.++. +...++...+++.+.+ +...+++.++.++|.+.|+++ ++.-+. ....++-
T Consensus 265 ---i~~-~~~~~~~~T~~g~-pl~~aaala~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~i~~vr--G~Glm~~ 334 (395)
T PRK03715 265 ---VAV-FEAGDQGGTYNGN-PLMTAVGVAVISQLLA---PGFLEGVRARGEYLKEKLLELSEERGLEGER--GEGLLRA 334 (395)
T ss_pred ---ccc-ccCCCcCCCCCCC-HHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHhhcCCcCeEE--cceeEEE
Confidence 322 1111111222322 2233333335665543 345677777888888888753 443222 2346666
Q ss_pred EEeC
Q 014724 409 VDLR 412 (419)
Q Consensus 409 vd~~ 412 (419)
|.+.
T Consensus 335 i~l~ 338 (395)
T PRK03715 335 LLLG 338 (395)
T ss_pred EEec
Confidence 6653
No 300
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.25 E-value=9.8e-10 Score=108.19 Aligned_cols=224 Identities=16% Similarity=0.193 Sum_probs=136.3
Q ss_pred CCCceeEecCCh-HHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHH
Q 014724 166 NKWGVNVQPLSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLE 244 (419)
Q Consensus 166 ~~~~v~V~~~sG-t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le 244 (419)
++|. ++.++| +.|++.++..++++||.|++-..++.+-+. .++..| +.++|++.| ...+|+|.|+
T Consensus 123 ~~wd--iiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~--------s~~a~g--v~~ipv~md--~~Gi~pE~l~ 188 (472)
T KOG0634|consen 123 KNWD--IIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQ--------SMEALG--VKIIPVKMD--QDGIDPESLE 188 (472)
T ss_pred CCce--EEEecCCchHHHHHHHHhhcCCCceEEecccchHHHH--------hccccC--ceEEecccc--CCCCCHHHHH
Confidence 5673 566777 679999999999999999999877655442 334555 467777765 4569999999
Q ss_pred HHhhhc--------CCeEEEEc-CCCCCCcC--C---hHHHHHHHHHhCCEEEEecccccccccc---CC----------
Q 014724 245 KTAILF--------RPKLIIAG-ASAYPRDF--D---YPRMRQIADAVGALLMMDMAHISGLVAA---SV---------- 297 (419)
Q Consensus 245 ~~l~~~--------~pklIi~~-~s~~p~~~--d---l~~I~~ia~~~ga~livD~ah~~Gl~~~---g~---------- 297 (419)
+.+... +|+++.+- +-.||+-. . -++|.+||+||+.+++.|+.++. +-+. +.
T Consensus 189 ~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~-Lq~~~y~~~~~~~~p~~s~ 267 (472)
T KOG0634|consen 189 EILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYF-LQMNTYNPSLELESPAHSS 267 (472)
T ss_pred HHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCccce-eeccccCCCccccCccccH
Confidence 998642 36666543 33566532 2 36899999999999999999642 2221 00
Q ss_pred -------cCCCCC----CCcEEEeCCCCcC-CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHH
Q 014724 298 -------VADPFK----YCDVVTTTTHKSL-RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLK 365 (419)
Q Consensus 298 -------~~~~~~----~~Div~~S~hK~l-~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~ 365 (419)
.++.+. |--|-..|+||-+ +|.|.||+.+++ -+.+++-...--.+++ |+.-...-+..-|+
T Consensus 268 ~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPGlRlG~it~~~------~~l~ril~~ae~~t~~-pSg~sq~iv~a~l~ 340 (472)
T KOG0634|consen 268 SMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPGLRLGWITGNS------LFLKRILDLAEVATSG-PSGFSQGIVYAMLK 340 (472)
T ss_pred HHHHHhhcCCcccccccccEEeccchhhhhcCcceeEEeecCH------HHHHHHhhhcceeecC-cccccHHHHHHHHH
Confidence 111111 1124578999987 788999999998 3555543322222232 33222222222344
Q ss_pred HhcChHHHHHH----HHHHHHHHHHHHHHHhC---C-cEEecCCCcceeEEEEeC
Q 014724 366 HAQSPEFKVYQ----NKVVSNCRALASRLVEL---G-YKLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 366 ~~~~~~~~~~~----~~v~~n~~~l~~~L~~~---G-~~v~~~~t~~hlv~vd~~ 412 (419)
...++++-++. ..+...+.++..+|.+. + +++.+ ....-++||.+.
T Consensus 341 ~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~-P~aGmFiwv~i~ 394 (472)
T KOG0634|consen 341 RWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHP-PKAGMFIWVEIP 394 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEec-CCcceEEEEEec
Confidence 43333333332 23334455566666552 3 33333 456678999874
No 301
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.24 E-value=8.4e-10 Score=122.20 Aligned_cols=227 Identities=15% Similarity=0.091 Sum_probs=139.6
Q ss_pred HHHHHHHHHcCCCCCCCceeEec-CChHHHHHHHHHHc-cCCC--CEEEEeCCCCCccccCccccccccccccccccEEE
Q 014724 152 LCQKRALAAFNLDENKWGVNVQP-LSGSPANFEVYTAI-LKPH--DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESM 227 (419)
Q Consensus 152 ~~~~~la~~~g~~~~~~~v~V~~-~sGt~A~~~~~~al-l~pG--D~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v 227 (419)
..|..++++.|++.. |+.+ -++|.+.++++.++ ++++ |+|++++..|+.+..... ......|. +++
T Consensus 125 ~~Qt~la~LtG~~~a----naSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~----t~a~~~G~--ev~ 194 (954)
T PRK05367 125 NFQTMVADLTGLEIA----NASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLR----TRAEPLGI--EVV 194 (954)
T ss_pred HHHHHHHHHHCCChh----hccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHH----HHHHhCCC--EEE
Confidence 367889999999984 3434 45577777777776 5554 999999988876542110 01123444 554
Q ss_pred ecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCC-CCCcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC-CC
Q 014724 228 PYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA-YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YC 305 (419)
Q Consensus 228 ~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~-~p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~-~~ 305 (419)
.++.+. |.+ ..+...+++..|+ ++...|+++|+++||++|+++++|..+.+.... ..|-+ ++
T Consensus 195 ~~~~~~-----d~~-------~~~~~~vlvq~p~~~G~i~d~~~i~~~ah~~Gal~~vda~~~Al~~l----~~pge~Ga 258 (954)
T PRK05367 195 VGDAAK-----ALD-------HDDVFGVLLQYPGTSGEVRDYTALIAAAHARGALVAVAADLLALTLL----TPPGEMGA 258 (954)
T ss_pred EecCcc-----CCC-------cccEEEEEEecCCCCeeeccHHHHHHHHHHcCCEEEEEehhhhccCC----CChhhcCC
Confidence 443331 111 1234445555554 456789999999999999999999976433221 22323 89
Q ss_pred cEEEeCCCCc-----CCCCCeeEEEEeCCCcchhhHHHHhhhcc------------cC-----------CCCCCChHH--
Q 014724 306 DVVTTTTHKS-----LRGPRGGMIFFKKDPVLGVELESAINNAV------------FP-----------GLQGGPHNH-- 355 (419)
Q Consensus 306 Div~~S~hK~-----l~GprgG~i~~~~~~~~~~~l~~~i~~~~------------~~-----------~~~g~p~~~-- 355 (419)
||+++++||+ |+||..|+++++++ +...+.... +. .-.++.+.-
T Consensus 259 Di~vgs~qkfg~P~g~GGP~aGflavr~~------~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRrekaTsNict~ 332 (954)
T PRK05367 259 DIAVGSAQRFGVPMGFGGPHAAYFAVRDA------YKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRREKATSNICTA 332 (954)
T ss_pred CEEEeeCcccCCCCCCCCCCEEEEEECHH------HHhhCCCCeeeeecccCCCcccccccccccccccccccccccchH
Confidence 9999999998 78898899999873 333221100 00 001121211
Q ss_pred -HHHHHHHH--HHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeEEEEe
Q 014724 356 -TIGGLAVC--LKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDL 411 (419)
Q Consensus 356 -~iaala~a--l~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~vd~ 411 (419)
.+.++..+ +..+...++++..+++..++.++++.|++.|+++... ...+.+.+++
T Consensus 333 qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~G~~~~~~-~~f~~~~~~~ 390 (954)
T PRK05367 333 QVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRALGLEVVHD-SFFDTLTVEV 390 (954)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcCcccCCC-CCCCeEEEeC
Confidence 11122111 2333445678889999999999999998889987643 2234455554
No 302
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.23 E-value=1e-09 Score=107.01 Aligned_cols=286 Identities=19% Similarity=0.225 Sum_probs=169.7
Q ss_pred cccccChh-HHHHHHHHHHHh-hhccccccc-------CCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHH
Q 014724 82 SLGEADPE-VCEIITKEKERQ-FKSLELIAS-------ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETL 152 (419)
Q Consensus 82 ~l~~~~~~-~~~~~~~e~~r~-~~~i~L~~s-------en~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~ 152 (419)
++...+++ +..+.+..+... .+.|||..| ..++=+.|++|-...+.+.....| -+-+-...+.+.
T Consensus 4 ~i~~~p~DpIlgL~e~f~~D~R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Y------l~i~G~~~f~~~ 77 (396)
T COG1448 4 KIEAAPADPILGLKEAFKADPRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNY------LPIEGLPEFLEA 77 (396)
T ss_pred ccccCCCCchhHHHHHHhcCCCcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhcccccccc------CCcCCcHHHHHH
Confidence 34445555 567666655544 456888754 233457888876655544332233 222223344433
Q ss_pred HHHHHHHHcCCCC-----CCCceeEecCChHHHHHHHHHHc--cCCCCEEEEeCCCCCccccCccccccccccccccccE
Q 014724 153 CQKRALAAFNLDE-----NKWGVNVQPLSGSPANFEVYTAI--LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFE 225 (419)
Q Consensus 153 ~~~~la~~~g~~~-----~~~~v~V~~~sGt~A~~~~~~al--l~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~ 225 (419)
+++ -+||.+. ..+ +.+++.+||.|+..+..-+ ..|..+|.+++|+-+.|-. -....|..++
T Consensus 78 ~~~---llFG~d~~~l~~~Rv-~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~--------If~~aGl~v~ 145 (396)
T COG1448 78 VQK---LLFGADSPALAEDRV-ATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKA--------IFEAAGLEVE 145 (396)
T ss_pred HHH---HhcCCCcHHHHhhhH-hheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHH--------HHHhcCCcee
Confidence 322 3588552 223 4588899999887665443 5677889999998766631 1234565544
Q ss_pred EEecccCCCCCCCCHHHHHHHhhhcCCe-EEE-EcCCCCCCcCC-----hHHHHHHHHHhCCEEEEeccccccccccCCc
Q 014724 226 SMPYRLDESTGLVDYDMLEKTAILFRPK-LII-AGASAYPRDFD-----YPRMRQIADAVGALLMMDMAHISGLVAASVV 298 (419)
Q Consensus 226 ~v~~~~~~~~~~iD~d~Le~~l~~~~pk-lIi-~~~s~~p~~~d-----l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~ 298 (419)
..+| .|.++..+|++.+-..+++.... +|+ .+..+|||-.| +++|.++.++.|.+-+.|.| |-|... |..
T Consensus 146 ~Y~Y-yd~~~~~~df~~mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~A-YQGF~~-Gle 222 (396)
T COG1448 146 TYPY-YDAETKGLDFDGMLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIA-YQGFAD-GLE 222 (396)
T ss_pred eeec-cccccccccHHHHHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehh-hhhhcc-chH
Confidence 4444 35567789999998888754332 444 44567887443 68899999999999999999 445321 110
Q ss_pred CC--CC----C-CC-cEEEeCCCCcC--CCCCeeEEEE-eCCCcchhhHHHH----hhhcccCCCCCCChHHHHHHHHH-
Q 014724 299 AD--PF----K-YC-DVVTTTTHKSL--RGPRGGMIFF-KKDPVLGVELESA----INNAVFPGLQGGPHNHTIGGLAV- 362 (419)
Q Consensus 299 ~~--~~----~-~~-Div~~S~hK~l--~GprgG~i~~-~~~~~~~~~l~~~----i~~~~~~~~~g~p~~~~iaala~- 362 (419)
.. .+ . +. -+|+.|++|.| .|-|.|.+.. .... +...+ +...+. ...++|..+...-.+.
T Consensus 223 eDa~~lR~~a~~~~~~lva~S~SKnfgLYgERVGa~~vva~~~----~~a~~v~sqlk~~iR-~~ySnPP~~Ga~vva~I 297 (396)
T COG1448 223 EDAYALRLFAEVGPELLVASSFSKNFGLYGERVGALSVVAEDA----EEADRVLSQLKAIIR-TNYSNPPAHGAAVVATI 297 (396)
T ss_pred HHHHHHHHHHHhCCcEEEEehhhhhhhhhhhccceeEEEeCCH----HHHHHHHHHHHHHHH-hccCCCchhhHHHHHHH
Confidence 00 01 1 22 37899999986 6778654333 2211 22222 222221 2334555554332221
Q ss_pred ----HHHHhcChHHHHHHHHHHHHHHHHHHHHHhC
Q 014724 363 ----CLKHAQSPEFKVYQNKVVSNCRALASRLVEL 393 (419)
Q Consensus 363 ----al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~ 393 (419)
.|+..-..|...++.|+.+.++.|.+.|++.
T Consensus 298 L~~p~Lra~W~~El~~Mr~Ri~~mR~~lv~~L~~~ 332 (396)
T COG1448 298 LNNPELRAEWEQELEEMRQRILEMRQALVDALKAL 332 (396)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 2443334466788999999999999999884
No 303
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.20 E-value=4.9e-09 Score=104.72 Aligned_cols=251 Identities=20% Similarity=0.160 Sum_probs=147.1
Q ss_pred hHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHc--cCCC
Q 014724 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKPH 192 (419)
Q Consensus 115 ~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~al--l~pG 192 (419)
+|.|.+|+.+.+.+..+.|.|. ++|-++.+.+.+++..-.. + -+++|||+|.+.++... .-.-
T Consensus 71 ~p~V~~Av~~~l~~G~~fg~Pt-----------e~Ei~~Aell~~~~p~~e~---v-rfvnSGTEAtmsAiRlARa~TgR 135 (432)
T COG0001 71 HPAVVEAVQEQLERGLSFGAPT-----------ELEVELAELLIERVPSIEK---V-RFVNSGTEATMSAIRLARAYTGR 135 (432)
T ss_pred CHHHHHHHHHHHHhcCCCCCCC-----------HHHHHHHHHHHHhcCcccE---E-EEecchhHHHHHHHHHHHHhhCC
Confidence 6889999999988776655553 4554566888888776331 2 46789999999888644 2245
Q ss_pred CEEEEeCCCCCccccCcccccc------cccccccccc----EEEecccCCCCCCCCHHHHHHHhhhc--CCeEEEEcC-
Q 014724 193 DRIMGLDLPHGGHLSHGFMTPK------RRVSGTSIYF----ESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAGA- 259 (419)
Q Consensus 193 D~Vl~~~~~~~g~~s~~~~~~~------~~i~~~g~~~----~~v~~~~~~~~~~iD~d~Le~~l~~~--~pklIi~~~- 259 (419)
|+|+..+-+|.||......... ......|..- .++.++ -.|++.+++++++. +...||+..
T Consensus 136 ~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~------yND~~al~~~~~~~g~~IAaVIvEPv 209 (432)
T COG0001 136 DKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLP------YNDLEALEEAFEEYGDDIAAVIVEPV 209 (432)
T ss_pred CeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEec------CCCHHHHHHHHHHcCCcEEEEEeccc
Confidence 7899888776666432211000 0000111100 111111 36899999999875 456677764
Q ss_pred -CCCCC----cCChHHHHHHHHHhCCEEEEecccccccccc-CCcCCCCC-CCcEEEeCCCCcC-CCCCeeEEEEeCCCc
Q 014724 260 -SAYPR----DFDYPRMRQIADAVGALLMMDMAHISGLVAA-SVVADPFK-YCDVVTTTTHKSL-RGPRGGMIFFKKDPV 331 (419)
Q Consensus 260 -s~~p~----~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~-g~~~~~~~-~~Div~~S~hK~l-~GprgG~i~~~~~~~ 331 (419)
.|.+. ..-++.|+++|++||++||.||.+ .|.... +..+.-+. ..|+.+ +.|.+ .|.+.|.+.+++
T Consensus 210 ~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEVi-TGFR~~~gGaq~~~gi~PDltt--lGKiIGGGlP~ga~gGr~--- 283 (432)
T COG0001 210 AGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVI-TGFRVALGGAQGYYGVEPDLTT--LGKIIGGGLPIGAFGGRA--- 283 (432)
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecch-hhcccCCcccccccCcCcchhh--hhhhhcCCcceeeeccHH---
Confidence 23333 334799999999999999999995 454322 22222222 346654 67988 566888888887
Q ss_pred chhhHHHHhhhcccCCCCCC---ChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHh----CCcEEe
Q 014724 332 LGVELESAINNAVFPGLQGG---PHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE----LGYKLV 398 (419)
Q Consensus 332 ~~~~l~~~i~~~~~~~~~g~---p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~----~G~~v~ 398 (419)
++.+.+...- +.+|++ .+.-.++|-.++++++.+.+ ...+++.+..++|++.|++ .|+++.
T Consensus 284 ---eiM~~~~p~g-~vyqaGT~sgnplamaAG~atl~~l~~~~--~~y~~l~~~~~~L~~gl~~~~~~~g~~~~ 351 (432)
T COG0001 284 ---EIMEQLAPLG-PVYQAGTLSGNPLAMAAGLATLEELMTEE--GVYERLDALGERLAEGLRAAAERHGIPLT 351 (432)
T ss_pred ---HHHhhhCCCC-CccccCCCCCcHHHHHHHHHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHHHHhCCCeE
Confidence 6777664422 112221 12233444344677765421 1234445555666665544 577654
No 304
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=99.19 E-value=1.4e-09 Score=102.43 Aligned_cols=225 Identities=22% Similarity=0.281 Sum_probs=137.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCC-CCcc-ccCccccc-cccccccccc
Q 014724 147 DELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLP-HGGH-LSHGFMTP-KRRVSGTSIY 223 (419)
Q Consensus 147 ~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~-~~g~-~s~~~~~~-~~~i~~~g~~ 223 (419)
+.|| +-+++.||.+..- |.+++.|||+|+..++..+++|||+.|...-. |-.. -.-|..+. ...+.-.|+.
T Consensus 68 dtLe----~vyA~vf~aE~a~--VRpq~isGTHAI~~aLfg~LRpgDell~i~G~PYDTLeevIG~rg~~~gSL~dfgi~ 141 (416)
T COG4100 68 DTLE----RVYAQVFGAEAAL--VRPQIISGTHAIACALFGILRPGDELLYITGSPYDTLEEVIGLRGEGQGSLKDFGIK 141 (416)
T ss_pred hHHH----HHHHHHhccccce--eeeeeecchhHHHHHHHhccCCCCeEEEecCCcchhHHHHhccCCCCcccHHHhCcc
Confidence 5666 4578999999852 56788899999999999999999999865311 1000 00000000 0112223455
Q ss_pred cEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCC-CC---C--CcCChHHHHHHHHHh--CCEEEEecccccccccc
Q 014724 224 FESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS-AY---P--RDFDYPRMRQIADAV--GALLMMDMAHISGLVAA 295 (419)
Q Consensus 224 ~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s-~~---p--~~~dl~~I~~ia~~~--ga~livD~ah~~Gl~~~ 295 (419)
++.+++ . .++.||++.++..+.+ ++|+|.+--| .| | ...+++++.++.|+. +++++||.++. ..+-.
T Consensus 142 Y~~v~L--t-~~gkiD~~~v~~~i~~-~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYG-EFvE~ 216 (416)
T COG4100 142 YKAVPL--T-ADGKIDIQAVKTAISD-RTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYG-EFVEE 216 (416)
T ss_pred eeeccc--c-cCCcccHHHHHHhcCc-cceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccch-hhhhc
Confidence 555554 3 3689999999999974 8999876432 23 3 234677888888875 79999999853 22211
Q ss_pred CCcCCCCC-CCcEEEeCCCCcCCCC---CeeEEEEeCCCcchhhHHHHhhhc-ccCCCC--CCChHHHHHHHHHHHHHhc
Q 014724 296 SVVADPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDPVLGVELESAINNA-VFPGLQ--GGPHNHTIGGLAVCLKHAQ 368 (419)
Q Consensus 296 g~~~~~~~-~~Div~~S~hK~l~Gp---rgG~i~~~~~~~~~~~l~~~i~~~-~~~~~~--g~p~~~~iaala~al~~~~ 368 (419)
..|.. ++|++.+|+=|.-+|- -||+|.++. ++.+.-... ..|++. ++.. -.++.++-
T Consensus 217 ---~EPt~vGaDliAGSLIKNpGGgiaktGGYiaGk~------~~ve~~~yRlTaPGIG~e~Gat-------~~~l~~my 280 (416)
T COG4100 217 ---KEPTHVGADLIAGSLIKNPGGGIAKTGGYIAGKA------ELVEAAAYRLTAPGIGREGGAT-------LYSLREMY 280 (416)
T ss_pred ---cCccccchhhhccceeeCCCCceeeccceeechH------HHHHhhceeeecCCcccccccc-------HHHHHHHH
Confidence 13444 8999999999986443 468998887 566554332 223321 1211 11233322
Q ss_pred ChHH---HHHHHHHHHHHHHHHHHHHhCCcEEec
Q 014724 369 SPEF---KVYQNKVVSNCRALASRLVELGYKLVS 399 (419)
Q Consensus 369 ~~~~---~~~~~~v~~n~~~l~~~L~~~G~~v~~ 399 (419)
.++ .....+-.+-+...+..|.++|+++.+
T Consensus 281 -qGlFlAPhvv~qa~Kga~fta~~le~lg~~~~P 313 (416)
T COG4100 281 -QGLFLAPHVVSQAVKGAHFTARFLEKLGFPVNP 313 (416)
T ss_pred -hhhccchHHHHHHhhhhHHHHHHHHHcCCCCCC
Confidence 111 234455555566666777778887664
No 305
>PLN00144 acetylornithine transaminase
Probab=99.19 E-value=3.2e-09 Score=107.33 Aligned_cols=245 Identities=18% Similarity=0.126 Sum_probs=132.0
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHcc---C
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---K 190 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all---~ 190 (419)
-+|+|.+|+.+.+... . +.+..++ ++. .+ +..+++.+..+.+. + .+.+||++|++.++.... .
T Consensus 32 ~~p~v~~ai~~q~~~~-~--~~~~~~~--~~~--~~--~la~~l~~~~~~~~----v-~f~~sGseA~e~AlklAr~~~~ 97 (382)
T PLN00144 32 GDPDWVKAVAEQAGTL-A--HVSNVYH--TIP--QV--ELAKRLVASSFADR----V-FFCNSGTEANEAAIKFARKYQR 97 (382)
T ss_pred CCHHHHHHHHHHHHhc-C--Ccccccc--CHH--HH--HHHHHHHhcCCCCe----E-EEeCCcHHHHHHHHHHHHHHHh
Confidence 4789999998887532 1 1111111 221 12 23355666654332 2 567889999998886442 1
Q ss_pred ------C------CCEEEEeCCCCCccccCccccccccccccccc-cEEEecccCCCC---CCCCHHHHHHHhhhcCCeE
Q 014724 191 ------P------HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDEST---GLVDYDMLEKTAILFRPKL 254 (419)
Q Consensus 191 ------p------GD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~-~~~v~~~~~~~~---~~iD~d~Le~~l~~~~pkl 254 (419)
+ ..+|+...-.|.|.. .+ .+...+.. +.....+..++. ...|++.+++.+...++++
T Consensus 98 ~~~~~~~~~~~~~r~~ii~~~~~yHG~t-~~------~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~aa 170 (382)
T PLN00144 98 VRAPDKKDPAASSATEFVSFSNSFHGRT-LG------ALALTSKEQYRTPFEPLMPGVTFVEYGNLEAARKLIQKGKTAA 170 (382)
T ss_pred ccCCCCccccccccceEEEECCCccccc-HH------HHhcCCCccccccCCCCCCCeEEeCCCCHHHHHHhcCCCCeEE
Confidence 1 246888775543331 01 01111110 000000000000 1237899999886557888
Q ss_pred EEEcCCCCCC----cCC--hHHHHHHHHHhCCEEEEeccccccccccCCcC-C-CCC-CCcEEEeCCCCcC-CCCCeeEE
Q 014724 255 IIAGASAYPR----DFD--YPRMRQIADAVGALLMMDMAHISGLVAASVVA-D-PFK-YCDVVTTTTHKSL-RGPRGGMI 324 (419)
Q Consensus 255 Ii~~~s~~p~----~~d--l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~-~-~~~-~~Div~~S~hK~l-~GprgG~i 324 (419)
|++....++. ... +++|+++|++||+++|.|++| .|+...+... . ... ..| +.|++|++ +|.+.|++
T Consensus 171 vi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~-tg~gr~g~~~~~~~~~~~PD--i~t~sK~l~~G~pig~v 247 (382)
T PLN00144 171 VFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQ-CGLGRTGYLWAHEAYGVEPD--IMTLAKPLAGGLPIGAV 247 (382)
T ss_pred EEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechh-hCCCccchHhhhhhcCCCCC--EEEecccccCCcceEEE
Confidence 8887544431 123 789999999999999999996 4554333211 1 111 346 55678998 57788999
Q ss_pred EEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHh
Q 014724 325 FFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE 392 (419)
Q Consensus 325 ~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~ 392 (419)
++++ ++.+.+.......+.+++... .++....++.+.++++ .+++.+..++|.+.|++
T Consensus 248 ~~~~------~~~~~~~~~~~~~T~~~~pl~-~aaa~a~l~~i~~~~~---~~~~~~~g~~l~~~l~~ 305 (382)
T PLN00144 248 LVTE------KVASAINPGDHGSTFAGGPLV-CNAALAVLDKISKPGF---LASVAKKGEYLRELLRR 305 (382)
T ss_pred EEcH------HHHhccCCCCCCCCCCCCHHH-HHHHHHHHHHHhhchH---HHHHHHHHHHHHHHHHH
Confidence 9987 576666533333333333222 3333335566543333 44444445555555543
No 306
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.19 E-value=2.3e-09 Score=109.95 Aligned_cols=255 Identities=17% Similarity=0.128 Sum_probs=139.8
Q ss_pred hcccccccC--C---CChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCCh
Q 014724 103 KSLELIASE--N---FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG 177 (419)
Q Consensus 103 ~~i~L~~se--n---~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sG 177 (419)
..|++..+. . +.+|.|.+++.+.+.+.. .+ +..++ .+....+++.+++.- .+ -..+++||
T Consensus 51 ~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~~~--~~-----~~~~~----~~~~la~~L~~~~~~-~~---~v~~~~sG 115 (426)
T PRK00062 51 EYIDYVGSWGPMILGHAHPEVVEAVIEAAEKGL--SF-----GAPTE----LEVELAELVIELVPS-IE---MVRMVNSG 115 (426)
T ss_pred EEEEcccchhhhhcCCCCHHHHHHHHHHHHhCC--cC-----CCCCH----HHHHHHHHHHHhCCC-CC---EEEEecCH
Confidence 446665542 2 458999999988886521 11 11112 222334666666531 22 12567889
Q ss_pred HHHHHHHHHHccC--CCCEEEEeCCCCCccccCccccc--cccc----ccccccc-----EEEecccCCCCCCCCHHHHH
Q 014724 178 SPANFEVYTAILK--PHDRIMGLDLPHGGHLSHGFMTP--KRRV----SGTSIYF-----ESMPYRLDESTGLVDYDMLE 244 (419)
Q Consensus 178 t~A~~~~~~all~--pGD~Vl~~~~~~~g~~s~~~~~~--~~~i----~~~g~~~-----~~v~~~~~~~~~~iD~d~Le 244 (419)
++|+..++..... .+++|+..+..|.|+. .+.... .... ...+... ....++ ..|++.++
T Consensus 116 seA~e~Aik~a~~~~g~~~ii~~~~~yHG~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~ 188 (426)
T PRK00062 116 TEATMSAIRLARGYTGRDKIIKFEGCYHGHA-DSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAP------YNDLEAVE 188 (426)
T ss_pred HHHHHHHHHHHHHHhCCCeEEEEcCccCCch-hhhhhccCccccccCCCCCCCCCcccccceEEcC------CCCHHHHH
Confidence 9999999876533 3678998888765542 000000 0000 0000000 011111 24789999
Q ss_pred HHhhh--cCCeEEEEcC--CCCCCcCC----hHHHHHHHHHhCCEEEEeccccccccccCCc-CCCCC-CCcEEEeCCCC
Q 014724 245 KTAIL--FRPKLIIAGA--SAYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-ADPFK-YCDVVTTTTHK 314 (419)
Q Consensus 245 ~~l~~--~~pklIi~~~--s~~p~~~d----l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~-~~~~~-~~Div~~S~hK 314 (419)
+.+.+ .+.++|+++. ++.+...+ +++|+++|++||+++|+|++|. |+...+.. ...++ ..|+ .+++|
T Consensus 189 ~~i~~~~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-G~r~g~~~~~~~~~~~pDi--~~~gK 265 (426)
T PRK00062 189 ELFEEYGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMT-GFRVALGGAQGYYGVTPDL--TTLGK 265 (426)
T ss_pred HHHHhCCCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechh-ccccCCccHHHHhCCCcch--Hhhhh
Confidence 88864 2456777763 22233334 8999999999999999999984 65321110 11111 2465 46789
Q ss_pred cC-CCCCeeEEEEeCCCcchhhHHHHhhhc---ccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHH
Q 014724 315 SL-RGPRGGMIFFKKDPVLGVELESAINNA---VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRL 390 (419)
Q Consensus 315 ~l-~GprgG~i~~~~~~~~~~~l~~~i~~~---~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L 390 (419)
.+ .|++.|++++++ ++.+.+... ....+.+++ ....++...+|+.+.++ ++.+++.++.+++.+.|
T Consensus 266 ~l~~G~p~ga~~~~~------~i~~~~~~~~~~~~~~T~~~~-p~~~aaa~a~L~~~~~~---~~~~~~~~~~~~~~~~l 335 (426)
T PRK00062 266 IIGGGLPVGAFGGRR------EIMEQLAPLGPVYQAGTLSGN-PLAMAAGLATLKLLKEP---GFYEELEALTKRLAEGL 335 (426)
T ss_pred HhhCCCcceeeeEHH------HHHHhhccCCCceecccCcCC-HHHHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHH
Confidence 98 566788888877 677766421 111222333 23333334456665432 35566666677777777
Q ss_pred Hh
Q 014724 391 VE 392 (419)
Q Consensus 391 ~~ 392 (419)
++
T Consensus 336 ~~ 337 (426)
T PRK00062 336 KE 337 (426)
T ss_pred HH
Confidence 54
No 307
>PLN02624 ornithine-delta-aminotransferase
Probab=99.19 E-value=3.3e-09 Score=110.22 Aligned_cols=246 Identities=17% Similarity=0.128 Sum_probs=131.8
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccC---
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--- 190 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~--- 190 (419)
-+|.|.+|+.+.+.+ +..+.+ .+. ++...+ ..++++++++.+. + ++.+||++|+..++.....
T Consensus 92 ~~p~v~~ai~~ql~~-~~~~~~--~~~--~~~~~~----la~~L~~~~~~~~----~-~f~~SGseA~e~AlklAr~~~~ 157 (474)
T PLN02624 92 CHPKIIKALTEQAEK-LTLSSR--AFY--NDKFPE----FAEYLTSMFGYDM----V-LPMNTGAEGVETAIKLARKWGY 157 (474)
T ss_pred CCHHHHHHHHHHHHh-cCCccc--ccC--CHHHHH----HHHHHHhhcCCCe----E-EEeCChHHHHHHHHHHHHHHHH
Confidence 389999999988854 322221 122 222223 3366778887543 2 6778999999988853321
Q ss_pred -----C-CC-EEEEeCCCCCccccCccccccccccccccccEEEec-ccCCCC---CCCCHHHHHHHhhhc--CCeEEEE
Q 014724 191 -----P-HD-RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPY-RLDEST---GLVDYDMLEKTAILF--RPKLIIA 257 (419)
Q Consensus 191 -----p-GD-~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~-~~~~~~---~~iD~d~Le~~l~~~--~pklIi~ 257 (419)
+ +. +|+...-.+ ||.... .++..+.......+ +..+.. ...|++.+++.++.. +.++|++
T Consensus 158 ~~~g~~~~~~~ii~~~~~y-----HG~t~~--~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~iaaiii 230 (474)
T PLN02624 158 EKKGIPKNEAIIVSCCGCF-----HGRTLA--AISMSCDNEATRGFGPLLPGHLKVDFGDLDALEKIFEEDGDRIAAFLF 230 (474)
T ss_pred hhcCCCCCCcEEEEECCCc-----CCCCHH--HhhcCCCccccccCCCCCCCceEeCCCCHHHHHHHHHhCCCCEEEEEE
Confidence 2 33 455554322 221100 11111100000000 000000 013789999988642 4567888
Q ss_pred cCCCCC--CcCC----hHHHHHHHHHhCCEEEEeccccccccccCCc-CCC-CC-CCcEEEeCCCCcCCC--CCeeEEEE
Q 014724 258 GASAYP--RDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-ADP-FK-YCDVVTTTTHKSLRG--PRGGMIFF 326 (419)
Q Consensus 258 ~~s~~p--~~~d----l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~-~~~-~~-~~Div~~S~hK~l~G--prgG~i~~ 326 (419)
+...++ ...+ +++|+++|++||+++|+|++|. |+...|.. ... .+ ..|+++. +|.++| ++.|+++.
T Consensus 231 Epv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~t-G~GrtG~~~a~~~~~i~pDiv~l--sK~lggG~~pigav~~ 307 (474)
T PLN02624 231 EPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQT-GLARTGKMLACDWEEVRPDVVIL--GKALGGGVIPVSAVLA 307 (474)
T ss_pred CCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CcCcCcchhhHHhcCCCCCEEEe--cccccCCCCcceeeee
Confidence 766544 2333 8999999999999999999984 65333321 111 11 3577775 699844 57888888
Q ss_pred eCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC
Q 014724 327 KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL 393 (419)
Q Consensus 327 ~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~ 393 (419)
++ ++.+.+.......+.+++... .++...+++.+.+++ ..++..++.++|.+.|+++
T Consensus 308 ~~------~i~~~~~~~~~~~T~~g~pl~-~aaa~aaLe~l~~~~---l~~~~~~~~~~l~~~L~~l 364 (474)
T PLN02624 308 DK------DVMLCIKPGEHGSTFGGNPLA-SAVAMAALQVVQDEK---LAERSAKLGQELRDQLQKI 364 (474)
T ss_pred cH------HHHhHhccCCcCCCCCCCHHH-HHHHHHHHHHHHhch---HHHHHHHHHHHHHHHHHHH
Confidence 76 555554432222222333333 333344566554322 3344555566666666553
No 308
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.18 E-value=3.1e-09 Score=108.34 Aligned_cols=247 Identities=17% Similarity=0.149 Sum_probs=132.9
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHcc----
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all---- 189 (419)
-+|.|.+|+.+.+.+-. +.+..++ ++. .+ ...+++.+++.... ...+.+||++|++.++....
T Consensus 57 ~~p~v~~ai~~q~~~~~---~~~~~~~--~~~--~~--~la~~L~~~~~~~~----~v~f~~sGseA~e~AlklAr~~~~ 123 (408)
T PRK04612 57 NDPDLVAALTEQAGKLW---HTSNVFY--SAP--PL--KLAEELVTASRFAE----KVFLCNSGTEANEAAIKLVRKWAS 123 (408)
T ss_pred CCHHHHHHHHHHHHhcc---ccccccC--CHH--HH--HHHHHHHhhCCCCC----EEEEcCchHHHHHHHHHHHHHHHH
Confidence 47899999888775421 1111111 121 11 23355666553221 23567789999998885432
Q ss_pred --C--C-CCEEEEeCCCCCccccCcccccccccccccc-----ccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcC
Q 014724 190 --K--P-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-----YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 259 (419)
Q Consensus 190 --~--p-GD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~-----~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~ 259 (419)
. + ..+|+...-.|.|... + .++..+. .+...+..+. .-...|++.+++.+...++.+|++..
T Consensus 124 ~~g~~~~r~~ii~~~~~yHG~t~-~------~~s~~~~~~~~~~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~aavi~eP 195 (408)
T PRK04612 124 SQGRPADKRVIVTFRGSFHGRTL-A------AVTATAQPKYQEGYEPLPGGFR-YVDFNDVEALEAAMAGGDVAAVMLEP 195 (408)
T ss_pred hhCCCCCCcEEEEECCCcCCccH-H------HHHhcCCcccccCCCCCCCCce-EcCCCCHHHHHHhhCCCCEEEEEECC
Confidence 1 1 2368887755433311 1 1111111 0110000000 00124789999888644556666653
Q ss_pred CCCC---C-c---CChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC-CCcEEEeCCCCcC-CCCCeeEEEEeCCC
Q 014724 260 SAYP---R-D---FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSL-RGPRGGMIFFKKDP 330 (419)
Q Consensus 260 s~~p---~-~---~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~-~~Div~~S~hK~l-~GprgG~i~~~~~~ 330 (419)
.++ . . ..+++|+++|++||+++|+|++|. |+...|....... +....+.+++|++ +|.+.|+++.++
T Consensus 196 -~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-g~gr~G~~~a~~~~~~~pdi~t~~K~l~~G~piga~~~~~-- 271 (408)
T PRK04612 196 -IQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQC-GMGRTGTLFAHWQEQVTPDIVTLAKALGGGFPIGAMLAGP-- 271 (408)
T ss_pred -ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCCchhhhhhcCCCCCEEEEcchhcCCCceEEEEECH--
Confidence 332 1 1 237899999999999999999974 5543332110011 3334455678998 566788888776
Q ss_pred cchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC
Q 014724 331 VLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL 393 (419)
Q Consensus 331 ~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~ 393 (419)
++.+.+.......+.+++ ....++...+|+.+.++ ...+++.++.++|.+.|+++
T Consensus 272 ----~~~~~~~~~~~~~t~~~~-p~~~aaa~a~L~~~~~~---~l~~~~~~~g~~l~~~l~~l 326 (408)
T PRK04612 272 ----KVAETMQFGAHGTTFGGN-PLAAAVARVALRKLASP---QIAANVARQSAALRAGLEAL 326 (408)
T ss_pred ----HHHhhhcCCCcCCCCCCC-HHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHH
Confidence 566655443333333333 33333334456655432 44666777777787777663
No 309
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=99.15 E-value=1e-10 Score=114.54 Aligned_cols=244 Identities=18% Similarity=0.260 Sum_probs=53.4
Q ss_pred CCCChHHHHHHHhhhhhccCCC-------CCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHH
Q 014724 111 ENFTSRAVMEAVGSCLTNKYSE-------GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 183 (419)
Q Consensus 111 en~~~~~V~eal~~~l~~~y~~-------g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~ 183 (419)
-.++++++.+++.+... .|+. |-.|+|| ..++ +.++.++|++.. +++++...|++.
T Consensus 15 Rs~l~~~a~~a~~~~a~-~Y~nLE~dl~~G~Rg~R~-------~~v~----~ll~~ltgAeaA-----~VvNnnaAAv~L 77 (367)
T PF03841_consen 15 RSPLSEEAIEAVAEVAS-GYSNLEYDLETGKRGSRY-------AHVE----ELLCELTGAEAA-----LVVNNNAAAVLL 77 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccc-cccccccccccccccccc-------cccc----cccccccccccc-----cccccccccccc
Confidence 34578888888876553 3321 2223332 2333 456788898873 556676778888
Q ss_pred HHHHccCCCCEEEEeC---CCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEE-EcC
Q 014724 184 VYTAILKPHDRIMGLD---LPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLII-AGA 259 (419)
Q Consensus 184 ~~~all~pGD~Vl~~~---~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi-~~~ 259 (419)
++.++. +|.+|++.. .+.|+.|-.. ..+..+|. +.+.+.. +..-.++++++.+.+ ++.+|+ +..
T Consensus 78 ~l~~la-~~~EvIvsRGelVeiGgsFRip-----~vm~~sGa--~lvEVGt---tN~t~~~Dye~AI~e-~Ta~ll~Vh~ 145 (367)
T PF03841_consen 78 ALNTLA-KGKEVIVSRGELVEIGGSFRIP-----DVMRQSGA--RLVEVGT---TNRTHLSDYEKAITE-NTAALLKVHT 145 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccc-cccccccccccccccccccccc-----cccccccc--ccccccc---ccccccccccccccc-cccccccccc
Confidence 887776 455666543 1233332110 12344555 3333332 233456677888875 666654 555
Q ss_pred CCCC-----CcCChHHHHHHHHHhCCEEEEecccccccccc----CCc--C---CCCC-CCcEEEeCCCCcCCCCCeeEE
Q 014724 260 SAYP-----RDFDYPRMRQIADAVGALLMMDMAHISGLVAA----SVV--A---DPFK-YCDVVTTTTHKSLRGPRGGMI 324 (419)
Q Consensus 260 s~~p-----~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~----g~~--~---~~~~-~~Div~~S~hK~l~GprgG~i 324 (419)
|||- ...+++++.++|++|++++++|.. +|.... +.. + ..+. |+|+|++|..|-|.||+.|+|
T Consensus 146 Sn~~i~GFt~~~~~~el~~la~~~~lp~i~Dlg--sG~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGGPQaGiI 223 (367)
T PF03841_consen 146 SNFRIQGFTGEVSLEELAELAKEHGLPVIVDLG--SGLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGGPQAGII 223 (367)
T ss_dssp ---------------HHHHHHHHHT--EEEE-T--THHHHHHHTT----------CCCCT-SEEEEETTSSSSS-S-EEE
T ss_pred cccccccccccccHHHHHHHHhhcCCcEEEECC--CCCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCCCCCeEEE
Confidence 6663 134789999999999999999986 443321 111 1 1233 899999999999999999999
Q ss_pred EEeCCCcchhhHHHHhhhccc-CCCCCCChHHHHHHHHHHHHHhcChH-----------HHHHHHHHHHHHHHHHHHHHh
Q 014724 325 FFKKDPVLGVELESAINNAVF-PGLQGGPHNHTIGGLAVCLKHAQSPE-----------FKVYQNKVVSNCRALASRLVE 392 (419)
Q Consensus 325 ~~~~~~~~~~~l~~~i~~~~~-~~~~g~p~~~~iaala~al~~~~~~~-----------~~~~~~~v~~n~~~l~~~L~~ 392 (419)
++++ ++.++++.... ..+. ..-..++++..+|+....++ +..-.+.+.+.++.|...|..
T Consensus 224 ~Gkk------~lI~~lk~~pl~Ralr--vdK~tla~L~atL~~Y~~~~~~~~~ip~l~ml~~~~~~L~~rA~~l~~~l~~ 295 (367)
T PF03841_consen 224 VGKK------ELIEKLKKHPLGRALR--VDKLTLAALEATLRLYLDPDKAKEEIPTLRMLTQSLEELRARAERLAAQLKA 295 (367)
T ss_dssp EEEH------HHHHHHHHHHHTTT-B----HHHHHHHHHHHHH-------------------------------------
T ss_pred EeCH------HHHHHHhhCCCcceEe--eCHHHHHHHHHHHHHHHHhhcccccccccccccccccccccccccccccccc
Confidence 9999 78777754311 1111 01234677776776554211 112234455667777777766
Q ss_pred C
Q 014724 393 L 393 (419)
Q Consensus 393 ~ 393 (419)
.
T Consensus 296 ~ 296 (367)
T PF03841_consen 296 A 296 (367)
T ss_dssp -
T ss_pred c
Confidence 4
No 310
>PRK12403 putative aminotransferase; Provisional
Probab=99.13 E-value=1.3e-08 Score=105.26 Aligned_cols=247 Identities=17% Similarity=0.119 Sum_probs=124.4
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCC-chhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHcc---
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYG-GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 189 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~-g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all--- 189 (419)
-+|.|.+|+.+.+.. +..+. .++. .++...+ ..++++++++-..+ ..++++||++|+.+++....
T Consensus 71 ~hp~v~~A~~~q~~~-~~~~~---~~~~~~~~~~~~----lae~L~~~~p~~~~---~v~f~~SGseA~e~AiklAr~~~ 139 (460)
T PRK12403 71 GRKDLAAAAARQMEQ-LPYYN---MFFHTTHPAVIE----LSELLFSLLPGHYS---HAIYTNSGSEANEVLIRTVRRYW 139 (460)
T ss_pred CCHHHHHHHHHHHHh-CCCee---cccccCCHHHHH----HHHHHHHhCCCCcC---EEEEeCCcHHHHHHHHHHHHHHH
Confidence 479999999888754 32211 1111 1222223 33677777763322 23677899999999887663
Q ss_pred ----CCCCEEE-EeCCC-CCccccCccccccccccccccc-----------cEEEecccC-CCCCC--------CCHHHH
Q 014724 190 ----KPHDRIM-GLDLP-HGGHLSHGFMTPKRRVSGTSIY-----------FESMPYRLD-ESTGL--------VDYDML 243 (419)
Q Consensus 190 ----~pGD~Vl-~~~~~-~~g~~s~~~~~~~~~i~~~g~~-----------~~~v~~~~~-~~~~~--------iD~d~L 243 (419)
++++.++ ...-. ||..+ + .++.++.. +..++++.- ..... .+.+.+
T Consensus 140 ~~~g~~~r~~ii~~~~~yHG~t~--~------~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l 211 (460)
T PRK12403 140 QVLGKPQKKIMIGRWNGYHGSTL--A------ATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQL 211 (460)
T ss_pred HhhCCCCCcEEEEECCCcCcccH--h------hhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHH
Confidence 2444443 33333 33221 1 11111110 122221110 00000 123566
Q ss_pred HHHhhh---cCCeEEEEcC--CCCCCcCC----hHHHHHHHHHhCCEEEEeccccccccccCCcC--CCCC-CCcEEEeC
Q 014724 244 EKTAIL---FRPKLIIAGA--SAYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTT 311 (419)
Q Consensus 244 e~~l~~---~~pklIi~~~--s~~p~~~d----l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~--~~~~-~~Div~~S 311 (419)
++.+.+ .+..+||+.. ...+...+ +++|+++|++||+++|+||+| .|+.-.|... ..++ ..|+++
T Consensus 212 e~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~-tGfGRtG~~~a~e~~gv~PDiv~-- 288 (460)
T PRK12403 212 EEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVI-GGFGRTGEWFAHEHFGFEPDTLS-- 288 (460)
T ss_pred HHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccc-cCCCcCchhhhhhhcCCCCCeEE--
Confidence 666532 2345677653 12223333 899999999999999999998 3442222110 1122 358886
Q ss_pred CCCcCC-CC-CeeEEEEeCCCcchhhHHHHhhhc--c--cCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHH-HHHH
Q 014724 312 THKSLR-GP-RGGMIFFKKDPVLGVELESAINNA--V--FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVV-SNCR 384 (419)
Q Consensus 312 ~hK~l~-Gp-rgG~i~~~~~~~~~~~l~~~i~~~--~--~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~-~n~~ 384 (419)
+.|.++ |. ..|.+++++ ++.+.+... . ...+.++. +...++..++|+.+.++ ...+++. ++.+
T Consensus 289 ~gK~lggG~~Piga~v~~~------~i~~~~~~~~~~~~~~~T~~gn-Pl~~Aaala~L~~i~~~---~l~~~~~~~~g~ 358 (460)
T PRK12403 289 IAKGLTSGYVPMGGLVLSK------RIAEALVEQGGVFAHGLTYSGH-PVAAAVAIANLKALRDE---GVVTRVKDDTGP 358 (460)
T ss_pred EcccccccccceEEEEECH------HHHHHHhcCCCccccCCCCCCC-HHHHHHHHHHHHHHHhc---cHHHHHHHHHHH
Confidence 689984 41 344444655 565554321 1 12233332 33333333456665433 2455564 5667
Q ss_pred HHHHHHHh
Q 014724 385 ALASRLVE 392 (419)
Q Consensus 385 ~l~~~L~~ 392 (419)
+|.+.|++
T Consensus 359 ~l~~~L~~ 366 (460)
T PRK12403 359 YLQRCLRE 366 (460)
T ss_pred HHHHHHHH
Confidence 77777654
No 311
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=99.11 E-value=2e-09 Score=106.91 Aligned_cols=293 Identities=15% Similarity=0.226 Sum_probs=173.6
Q ss_pred cccccC-hhHHHHHHHHHHHh-hhcccccccCCC-ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 014724 82 SLGEAD-PEVCEIITKEKERQ-FKSLELIASENF-TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRAL 158 (419)
Q Consensus 82 ~l~~~~-~~~~~~~~~e~~r~-~~~i~L~~sen~-~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la 158 (419)
+-+.++ .++++++++|..-. .-...+..+-.+ .++...+-+...+ +++. +....-++ ....+|.+|...++
T Consensus 57 P~~gl~~d~v~~~i~~~~~ld~~~~~~~vS~~v~~~~~~~~~l~~~~~-~k~N--~l~~d~fp---~~~~~e~~~Vnm~~ 130 (491)
T KOG1383|consen 57 PSKGLPKDAVLELINDELMLDGNPRLGLASGVVYWGEPELDKLIMEAY-NKFN--PLHPDEFP---VVRKLEAECVNMIA 130 (491)
T ss_pred CCCCCCHHHHHHHHHHHhccCCCcccCeeeEEEecCCcchhhHHHHHH-hhcC--ccCccccc---hhHHHHHHHHHHHH
Confidence 444566 45788888875422 112233322222 2333333333222 2321 11111122 24589999999999
Q ss_pred HHcCCCCCCCceeEecCChHHHHHHHHHHc---cCC--C---CEEEEeCCCCCccccCccccccccccccccccEEEecc
Q 014724 159 AAFNLDENKWGVNVQPLSGSPANFEVYTAI---LKP--H---DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR 230 (419)
Q Consensus 159 ~~~g~~~~~~~v~V~~~sGt~A~~~~~~al---l~p--G---D~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~ 230 (419)
.+|+.+.+.. -.-+++||+++.++-... .+. | -.|+++...|.+.- +..+..+.+++-++
T Consensus 131 ~L~~~~~~~~--g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~e--------K~a~yf~v~l~~V~-- 198 (491)
T KOG1383|consen 131 NLFNAPSDSC--GCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFE--------KAARYFEVELREVP-- 198 (491)
T ss_pred HHhcCCcccc--CccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHH--------HHHhhEEEEEEeee--
Confidence 9999997643 345566788755443322 111 1 12333322221111 11223344444445
Q ss_pred cCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CcCChHHHHHHHHH-hCCEEEEecccccccccc-CCcC-CCCC--
Q 014724 231 LDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADA-VGALLMMDMAHISGLVAA-SVVA-DPFK-- 303 (419)
Q Consensus 231 ~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p--~~~dl~~I~~ia~~-~ga~livD~ah~~Gl~~~-g~~~-~~~~-- 303 (419)
+++.++.+|+..+.+.+.+ ++.+|+...+++| ...|+++|.++.-+ +++.+++|.+- -|.+.. +... .+|+
T Consensus 199 ~~~~~~~~D~~k~~~~i~e-Nti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~-GgFi~p~~~~~~~~fdFr 276 (491)
T KOG1383|consen 199 LDEGDYRVDPGKVVRMIDE-NTIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACL-GGFINPAGYLNEEEFDFR 276 (491)
T ss_pred ccccceEecHHHHHHHhcc-ceEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccC-ccccccccccCccccccC
Confidence 5556899999999999975 7888888777776 46789999999988 99999999983 344432 3222 2333
Q ss_pred --CCcEEEeCCCCcCCCCCe-eEEEEeCCCcchhhHHH-Hh--hhcccCCCCCCCh------HHHHHHHHHHHHHhcChH
Q 014724 304 --YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELES-AI--NNAVFPGLQGGPH------NHTIGGLAVCLKHAQSPE 371 (419)
Q Consensus 304 --~~Div~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~-~i--~~~~~~~~~g~p~------~~~iaala~al~~~~~~~ 371 (419)
++--++.++||.-..|.| ++++.+.+ ++.. .+ ......+.+++|. -+.+++..+++..+..++
T Consensus 277 ~p~V~Sisa~~HKYGl~~~G~~~vl~r~k-----~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG~eG 351 (491)
T KOG1383|consen 277 VPGVTSISADGHKYGLAPAGSSWVLYRNK-----ELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAALMSLGEEG 351 (491)
T ss_pred CCCceeEeeccceeeeeecCcEEEEEccc-----ccccceEEEeccccCccccCcccccCCcccHHHHHHHHHHHhhHHH
Confidence 667788999996456776 88888765 2211 11 1111222233332 234555555666666778
Q ss_pred HHHHHHHHHHHHHHHHHHHHhC-CcEEec
Q 014724 372 FKVYQNKVVSNCRALASRLVEL-GYKLVS 399 (419)
Q Consensus 372 ~~~~~~~v~~n~~~l~~~L~~~-G~~v~~ 399 (419)
+.+..+++.++++.|++.+++. |+.++.
T Consensus 352 Y~~~~~~ive~~~~l~egie~i~~i~i~g 380 (491)
T KOG1383|consen 352 YRENTQNIVETARKLREGIENIKGIKIVG 380 (491)
T ss_pred HHHHHHHHHHHHHHHHHhhhccccceecC
Confidence 8888999999999999999996 777764
No 312
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=99.11 E-value=4.8e-09 Score=101.13 Aligned_cols=275 Identities=20% Similarity=0.214 Sum_probs=162.0
Q ss_pred cCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHcc
Q 014724 110 SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL 189 (419)
Q Consensus 110 sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all 189 (419)
+.+-++..-..||-. ..+.|.|+|.|. .|. +.++++||.+.. +-+.-|-.|-++.+..++
T Consensus 56 GTgams~~qwaamm~-----GDEAYagsrs~~------~L~----~avkdifGfq~~-----iPthQGRgAE~Il~~i~i 115 (471)
T COG3033 56 GTGAMTDKQWAAMMR-----GDEAYAGSRSYY------ALA----DAVKDIFGFQYT-----IPTHQGRGAENILIPILI 115 (471)
T ss_pred CcccccHHHHHHHhc-----cchhhcccccHH------HHH----HHHHHhcCceee-----eeccCCccHHHHHHHHHh
Confidence 344456665655532 234566655432 343 456789998761 333457777777888888
Q ss_pred CCCCEEEEeCC--CCCccccCccccccccccccccccEEEeccc--CC-----CCCCCCHHHHHHHhhhcCC---eEEEE
Q 014724 190 KPHDRIMGLDL--PHGGHLSHGFMTPKRRVSGTSIYFESMPYRL--DE-----STGLVDYDMLEKTAILFRP---KLIIA 257 (419)
Q Consensus 190 ~pGD~Vl~~~~--~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~--~~-----~~~~iD~d~Le~~l~~~~p---klIi~ 257 (419)
++|+.+..... ..+.|+... +.-+...|..+.-++.+- |. -.|.+|++.|++++++..+ -.|++
T Consensus 116 k~~~~~pg~~~~~~sN~~FdTT----r~h~~~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~ 191 (471)
T COG3033 116 KKGEQEPGSKMVAFSNYHFDTT----RGHIQINGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVL 191 (471)
T ss_pred hhccccCCccccccccceecch----hHHHHhcCCccccccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEE
Confidence 87776543111 112333211 112233444322222110 11 1368999999999987433 23433
Q ss_pred ---cCCCCCC---cCChHHHHHHHHHhCCEEEEeccccccccc---c---CCcCCC--------CCCCcEEEeCCCCcCC
Q 014724 258 ---GASAYPR---DFDYPRMRQIADAVGALLMMDMAHISGLVA---A---SVVADP--------FKYCDVVTTTTHKSLR 317 (419)
Q Consensus 258 ---~~s~~p~---~~dl~~I~~ia~~~ga~livD~ah~~Gl~~---~---g~~~~~--------~~~~Div~~S~hK~l~ 317 (419)
+++.-+. ..+++++.+||++||+.++.|.+..+.-.+ . +..... +.++|-++.|.-|--.
T Consensus 192 tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~l 271 (471)
T COG3033 192 TITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDGL 271 (471)
T ss_pred EEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhheeeccccce
Confidence 3333332 235789999999999999999985433111 1 111111 2289999999999655
Q ss_pred CCCeeEEEEeCCCcchhhHHHHhh-----hcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHh
Q 014724 318 GPRGGMIFFKKDPVLGVELESAIN-----NAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE 392 (419)
Q Consensus 318 GprgG~i~~~~~~~~~~~l~~~i~-----~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~ 392 (419)
.+-||++..+++-.. ++..... +--||. .||-.-..+.++++.|.+.... .|.+...+..++|.+.|.+
T Consensus 272 vnmGGfl~~~D~~~f--Dvy~~~~~~~V~~eG~~t-YGgl~GrdmealAvGL~e~~~~---~yl~~Rv~Qv~YL~~~l~~ 345 (471)
T COG3033 272 VNMGGFLCFKDDSFF--DVYEECRTLVVVQEGFPT-YGGLAGRDMEALAVGLREGVNF---DYLAHRVAQVQYLADGLEE 345 (471)
T ss_pred eccccEEEecCccHH--HHHHHHHhheEeeccccc-cCcccchhHHHHHHHHHHhcCc---HHHHHHHHHHHHHHHHHHh
Confidence 678899999985110 1222211 112332 3444445577888899887753 3455555668999999999
Q ss_pred CCcEEecCCCcceeEEEEeCCcc
Q 014724 393 LGYKLVSGGSDNHLVLVDLRPMV 415 (419)
Q Consensus 393 ~G~~v~~~~t~~hlv~vd~~~~~ 415 (419)
.|++++. ....|-++||...+.
T Consensus 346 ~GVpi~~-paGGHavfvda~~~l 367 (471)
T COG3033 346 AGVPIVQ-PAGGHAVFVDAGKFL 367 (471)
T ss_pred cCCeeEe-cCCCceEEeehhhhc
Confidence 9998764 245699999987654
No 313
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.10 E-value=1.5e-08 Score=104.11 Aligned_cols=249 Identities=16% Similarity=0.097 Sum_probs=129.0
Q ss_pred CChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccC--
Q 014724 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK-- 190 (419)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~-- 190 (419)
.-+|.|.+|+.+.+.+-. .. .+++. ++ ...++.+++.+++....+ ...+++||++|+..++.....
T Consensus 91 h~hp~v~~Av~~ql~~l~---~~-~~~~~-~~----~~~~lAe~L~~~~p~~~~---~v~f~~SGsEA~e~AlklAr~~t 158 (442)
T TIGR03372 91 HRNPNVIAAVENQLAKQP---LH-SQELL-DP----LRALLAKTLAALTPGKLK---YSFFCNSGTESVEAALKLAKAYQ 158 (442)
T ss_pred CCCHHHHHHHHHHHHhCC---Cc-ccccC-CH----HHHHHHHHHHHhCCCCcC---EEEEeCCchHHHHHHHHHHHHHH
Confidence 357999999988875421 11 11221 22 222244667776643322 235668999999988864321
Q ss_pred ---CCCEEEEeCCCCCccccCccccccccccccccc-cEEEecccCCCC---CCCCHHHHHHHhhh-----cCCeEEEEc
Q 014724 191 ---PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDEST---GLVDYDMLEKTAIL-----FRPKLIIAG 258 (419)
Q Consensus 191 ---pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~-~~~v~~~~~~~~---~~iD~d~Le~~l~~-----~~pklIi~~ 258 (419)
...+|++..-.|.|... + .+..++.. +.....+..+.- ...|.+.+++.+++ .+..+||+.
T Consensus 159 ~~~gr~~ii~~~~~yHG~t~-~------~ls~t~~~~~~~~~~p~~~~~~~~p~~d~~~~~~~l~~~~~~~~~vAavIvE 231 (442)
T TIGR03372 159 SPRGKFTFIAASGAFHGKSL-G------ALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALNECKKTGDDVAAIILE 231 (442)
T ss_pred hhcCCcEEEEECCCccCCCH-H------HhhccCCcccCCCCCCCCCCCEEeCCCCHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 23578887765433311 1 11111110 000000000000 12467777777743 235566665
Q ss_pred C--CCCCCcCC----hHHHHHHHHHhCCEEEEeccccccccccCCcC--CCCC-CCcEEEeCCCCcCCC--CCeeEEEEe
Q 014724 259 A--SAYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLRG--PRGGMIFFK 327 (419)
Q Consensus 259 ~--s~~p~~~d----l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~--~~~~-~~Div~~S~hK~l~G--prgG~i~~~ 327 (419)
. +..+...+ +++++++|++||+++|+|++| .|+...|... .-+. ..|+++ +.|.++| .+.|.++++
T Consensus 232 pv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~-tG~GRtG~~~a~e~~gv~PDivt--~gK~lg~G~~Pigavv~~ 308 (442)
T TIGR03372 232 PIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQ-TGMGRTGKMFACEHEGVQPDILC--LAKALGGGVMPIGATIAT 308 (442)
T ss_pred CccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecc-cCCCccccchhhhhcCCCCCeee--ehhhhcCCcccceEEEec
Confidence 3 12222233 899999999999999999998 3542222210 0111 358876 6899954 245556666
Q ss_pred CCCcchhhHHHHhhhc--ccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC
Q 014724 328 KDPVLGVELESAINNA--VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL 393 (419)
Q Consensus 328 ~~~~~~~~l~~~i~~~--~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~ 393 (419)
+ ++.+.+... .+..+.++.. ...++....|+.+.+++ ..++..+.-++|.+.|+++
T Consensus 309 ~------~i~~~~~~~~~~~~~T~~gnp-~~~Aaa~a~L~~i~~~~---l~~~~~~~G~~l~~~L~~l 366 (442)
T TIGR03372 309 E------AVFSVLFDNPFLHTTTFGGNP-LACAAALATINELLEKN---LPAQAAIKGDFLLDGFQQL 366 (442)
T ss_pred H------HHHHhhhccCccccCCCCCCH-HHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHH
Confidence 6 565555221 2222333322 22333333566654333 3455566667777777653
No 314
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.09 E-value=4.4e-08 Score=100.51 Aligned_cols=272 Identities=16% Similarity=0.037 Sum_probs=137.8
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHc---cC
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI---LK 190 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~al---l~ 190 (419)
-+|.+.+++.+.+.+ ....+.. ..+++ ..+ ++.+++.+..+.+..+ ..++.+||++|+..++... .+
T Consensus 58 ~~~~i~~a~~~~~~~-~~~~~~~---~~~~~--~~~--~la~~l~~~~~~~~~~--~~~f~~sGsea~e~Alklar~~~~ 127 (425)
T PRK08088 58 LHPKVVAAVEAQLKK-LSHTCFQ---VLAYE--PYL--ELCEKMNQKVPGDFAK--KTLLVTTGSEAVENAVKIARAATK 127 (425)
T ss_pred CCHHHHHHHHHHHhh-CCCcccc---ccCCH--HHH--HHHHHHHHhCCCCCCC--EEEEeCCcHHHHHHHHHHHHHHhC
Confidence 478889888888753 2111110 01112 122 2335666766643311 2367889999888777544 33
Q ss_pred CCCEEEEeCCCCCccccCcccccccc-c-ccccc-----ccEEEecccCCCCCCC--CHHHHHHHhhh----cCCeEEEE
Q 014724 191 PHDRIMGLDLPHGGHLSHGFMTPKRR-V-SGTSI-----YFESMPYRLDESTGLV--DYDMLEKTAIL----FRPKLIIA 257 (419)
Q Consensus 191 pGD~Vl~~~~~~~g~~s~~~~~~~~~-i-~~~g~-----~~~~v~~~~~~~~~~i--D~d~Le~~l~~----~~pklIi~ 257 (419)
+ .+|+...+.|.|... +....... . ...+. .+..++++.+..+... +++.+++.++. .+..+|++
T Consensus 128 r-~~iv~~~~~yHG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~aavi~ 205 (425)
T PRK08088 128 R-SGVIAFTGAYHGRTH-YTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGVSEDDAIASIERIFKNDAAPEDIAAIII 205 (425)
T ss_pred C-CeEEEECCccCCccH-HHHHhhCCCCccccCCCCCCCCcEEcCCCccccCccHHHHHHHHHHHHHhccCCCceEEEEE
Confidence 4 456766776544321 11000000 0 00000 0111222222111111 15568887752 34567776
Q ss_pred cCC-CCC-C----cCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcC-CCCCeeEEEEeC
Q 014724 258 GAS-AYP-R----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSL-RGPRGGMIFFKK 328 (419)
Q Consensus 258 ~~s-~~p-~----~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l-~GprgG~i~~~~ 328 (419)
... +++ . ...+++|.++|++||+++|.|++|. |+...+.. ..++ +.+.-+.|++|++ +|.|.|++++++
T Consensus 206 Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~-g~g~~g~~-~~~~~~~~~pdi~s~sK~l~~G~rig~v~~~~ 283 (425)
T PRK08088 206 EPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQT-GAGRTGTL-FAMEQMGVAADLTTFAKSIAGGFPLAGVTGRA 283 (425)
T ss_pred CcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCcch-hHHhhcCCCCCEEEEeccccCCCcceeeEecH
Confidence 542 222 1 2237899999999999999999964 54333321 1111 2223357889998 677899999987
Q ss_pred CCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHh----CCc-EEecCCCc
Q 014724 329 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE----LGY-KLVSGGSD 403 (419)
Q Consensus 329 ~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~----~G~-~v~~~~t~ 403 (419)
++.+.+.......+.+++ ....++....++.... +...+++++..+++.+.|.+ .+. ..+. +.
T Consensus 284 ------~~~~~~~~~~~~~t~~~~-~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~-g~- 351 (425)
T PRK08088 284 ------EVMDAIAPGGLGGTYAGN-PIACAAALAVLKVFEQ---ENLLQKANALGEKLKDGLLAIAEKHPEIGDVR-GL- 351 (425)
T ss_pred ------HHHhhcCCCCCCCCCCcC-HHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEe-cc-
Confidence 677766544333333332 2333344445555432 23344444445555555543 232 1122 22
Q ss_pred ceeEEEEe
Q 014724 404 NHLVLVDL 411 (419)
Q Consensus 404 ~hlv~vd~ 411 (419)
.-++|+.+
T Consensus 352 G~~~~l~l 359 (425)
T PRK08088 352 GAMIAIEL 359 (425)
T ss_pred ceEEEEEE
Confidence 34578877
No 315
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.08 E-value=5.4e-08 Score=99.87 Aligned_cols=252 Identities=14% Similarity=0.155 Sum_probs=132.5
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHcc-CCC
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL-KPH 192 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all-~pG 192 (419)
-+|.|.+|+.+.+.+....+ + .++. .. +..+++.+++....+ -..+.+||++|++.++.... -.|
T Consensus 70 ~~p~v~~ai~~q~~~~~~~~------~-~~~~--~~--~la~~L~~~~~~~~~---~v~f~~SGsEA~e~AiklAr~~tg 135 (433)
T PRK00615 70 SHPKICDAIQQGAERGTSYG------L-TSEQ--EI--LFAEELFSYLGLEDH---KIRFVSSGTEATMTAVRLARGITG 135 (433)
T ss_pred CCHHHHHHHHHHHHhCCCCC------C-CCHH--HH--HHHHHHHHhCCCCcC---EEEEeCchHHHHHHHHHHHHHhhC
Confidence 47999999988875422111 1 1121 22 234667777654321 12567899999998886442 233
Q ss_pred -CEEEEeCCCCCccccCcccccccccccccccc----EEE-ecccCCCC---CCCCHHHHHHHhhhc--CCeEEEEcCC-
Q 014724 193 -DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYF----ESM-PYRLDEST---GLVDYDMLEKTAILF--RPKLIIAGAS- 260 (419)
Q Consensus 193 -D~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~----~~v-~~~~~~~~---~~iD~d~Le~~l~~~--~pklIi~~~s- 260 (419)
.+|+...-.|.|... +.. ..+...+... ... +-+..+.. ...|++.+++.+.++ +..+||+..-
T Consensus 136 r~~ii~~~~~yHG~td-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavI~Epv~ 211 (433)
T PRK00615 136 RSIIIKFLGCYHGHAD-TLL---QGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLGHRVAGVIFEPIC 211 (433)
T ss_pred CCEEEEEcCccCCCCc-ccC---cccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcCCceEEEEECCCC
Confidence 567777655444210 000 0011111000 000 00000000 123789999988643 3456766531
Q ss_pred -CCCCcCC----hHHHHHHHHHhCCEEEEeccccccccccCCc--CCCCC-CCcEEEeCCCCcCC-CCCeeEEEEeCCCc
Q 014724 261 -AYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTTTHKSLR-GPRGGMIFFKKDPV 331 (419)
Q Consensus 261 -~~p~~~d----l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~--~~~~~-~~Div~~S~hK~l~-GprgG~i~~~~~~~ 331 (419)
+.+...+ +++|+++|++||+++|+|++| .|+ ..|.. ...++ ..|+++ +.|.++ |..+|++++++
T Consensus 212 ~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~-tG~-R~G~~ga~~~~gv~PDi~~--~gK~lggG~p~~av~~~~--- 284 (433)
T PRK00615 212 ANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVV-TGF-RVAQGGAAAIYHVKPDITV--YGKILGGGLPAAAVVAHK--- 284 (433)
T ss_pred CCCCcccCCHHHHHHHHHHHHHcCCEEEEEccc-ccc-cccHhHHHHhcCCCCCeEE--EcccccCCcceeeeeecH---
Confidence 1122222 579999999999999999998 466 22211 01112 468875 689995 55688888887
Q ss_pred chhhHHHHhhhc--ccC-CCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHh----CCcEE
Q 014724 332 LGVELESAINNA--VFP-GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE----LGYKL 397 (419)
Q Consensus 332 ~~~~l~~~i~~~--~~~-~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~----~G~~v 397 (419)
++.+.+... .+. .+.++ ++...++...+|+.+.++ ...+++.++.++|.+.|++ .|+.+
T Consensus 285 ---~i~~~~~~~~~~~~~~T~~g-~p~~~aa~la~L~~i~~~---~~~~~~~~~g~~l~~~l~~~~~~~g~~v 350 (433)
T PRK00615 285 ---SIMDHLAPEGTIFQAGTLSG-NPLAMAAGKASINLCREQ---GFYTQLSTLEQNFLSPIEEMIRSQGFPV 350 (433)
T ss_pred ---HHHhhhcCCCCcccCCCCcc-cHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHHHHHHcCCCe
Confidence 566665321 111 12222 223344434456665433 2356666666677555544 46653
No 316
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.07 E-value=3.2e-08 Score=101.98 Aligned_cols=254 Identities=15% Similarity=0.041 Sum_probs=133.6
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHcc--CC
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--KP 191 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all--~p 191 (419)
-+|.|.+|+.+.+.+.. +....++ .++. .+ +..+++.+++....+ ...+++||++|++.++.... ..
T Consensus 58 ~~p~v~~Ai~~ql~~~~---~~~~~~~-~~~~--~~--~la~~L~~~~p~~~~---~v~f~~sGsEAve~AlklAr~~tg 126 (443)
T PRK08360 58 NNPRVVKAIKEQTDKLI---HYTPIYG-FPVE--PL--LLAEKLIEIAPGDNP---KVSFGLSGSDANDGAIKFARAYTK 126 (443)
T ss_pred CCHHHHHHHHHHHHhcc---Ccccccc-CcHH--HH--HHHHHHHHhCCCCCC---EEEEcCCHHHHHHHHHHHHHHhcC
Confidence 47999999988876421 1111111 1121 12 234667777654322 22566789999998885442 22
Q ss_pred CCEEEEeCCCCCccccCccccccc---ccc-ccc--cccEEEecccCCC-CC--------CCCHHHHHHHhhh----cCC
Q 014724 192 HDRIMGLDLPHGGHLSHGFMTPKR---RVS-GTS--IYFESMPYRLDES-TG--------LVDYDMLEKTAIL----FRP 252 (419)
Q Consensus 192 GD~Vl~~~~~~~g~~s~~~~~~~~---~i~-~~g--~~~~~v~~~~~~~-~~--------~iD~d~Le~~l~~----~~p 252 (419)
..+|+...-.|.|.. .+...... ... ..+ ..+..++++.... .+ ..+.+.+++.++. .++
T Consensus 127 r~~ii~~~~~yHG~t-~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i 205 (443)
T PRK08360 127 RRKILSYLRSYYGST-YGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEVYAEGV 205 (443)
T ss_pred CCeEEEEeCCcCCcC-HHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhccCCCCe
Confidence 346776654433321 00000000 000 000 0122233321000 00 0234556666642 357
Q ss_pred eEEEEcCCCCC--CcC----ChHHHHHHHHHhCCEEEEeccccccccccCCcCC--CCC-CCcEEEeCCCCcC-CCCCee
Q 014724 253 KLIIAGASAYP--RDF----DYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK-YCDVVTTTTHKSL-RGPRGG 322 (419)
Q Consensus 253 klIi~~~s~~p--~~~----dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~--~~~-~~Div~~S~hK~l-~GprgG 322 (419)
++|++..-.++ ... -+++|.++|++||+++|+|++|. |+...|.... .+. ..|++ +++|++ +|++.|
T Consensus 206 AAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~gr~G~~~a~~~~~~~pDii--tlsK~l~~G~pig 282 (443)
T PRK08360 206 AALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQS-GLGRTGKWFAIEHFGVEPDII--TLGKPLGGGLPIS 282 (443)
T ss_pred EEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCccchhhhhcCCCCCEE--EecccccCCceeE
Confidence 78888743232 111 37899999999999999999974 5533332111 112 35776 459998 567889
Q ss_pred EEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHh
Q 014724 323 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE 392 (419)
Q Consensus 323 ~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~ 392 (419)
++++++ ++.+.+.......+.+++... .++...+++.+.++ ...+++.++.++|.+.|++
T Consensus 283 av~~~~------~i~~~~~~~~~~~T~~~~p~~-~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~ 342 (443)
T PRK08360 283 ATIGRA------EIMDSLPPLAHAFTLSGNPVA-SAAALAVIEEIEEK---NLLKRAEKLGNYTKKRLEE 342 (443)
T ss_pred EEEEcH------HHHhhhcCCCCCCCCCcCHHH-HHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHHHH
Confidence 999887 676666533222333333333 33333456665433 3456666677777777765
No 317
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.07 E-value=2.4e-08 Score=102.30 Aligned_cols=250 Identities=14% Similarity=0.038 Sum_probs=135.9
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHc-c-CC
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-L-KP 191 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~al-l-~p 191 (419)
-+|.|.+|+.+.+.+- .. .....+ .++. .+ ...+++.+++.....+ ..++++||++|++.++... . ..
T Consensus 57 ~~p~v~~ai~~ql~~~-~~--~~~~~~-~~~~--~~--~la~~l~~~~p~~~~~--~~~f~~sGseA~e~AlklAr~~tg 126 (421)
T PRK06777 57 RHPKVVAAVRQQLDQF-TH--TAYQIV-PYAS--YV--TLAERINALAPIDGPA--KTAFFTTGAEAVENAVKIARAYTG 126 (421)
T ss_pred CCHHHHHHHHHHHhhc-cc--cccccc-CChH--HH--HHHHHHHHhCCCCCCc--eEEEeCCcHHHHHHHHHHHHHhhC
Confidence 4788999988887542 11 110001 1111 12 2335666766421111 2366789999999887543 2 22
Q ss_pred CCEEEEeCCCCCccccCcccccccccccccc-------------ccEEEecccCCC--CCCCCHHHHHHHhhh----cCC
Q 014724 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-------------YFESMPYRLDES--TGLVDYDMLEKTAIL----FRP 252 (419)
Q Consensus 192 GD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~-------------~~~~v~~~~~~~--~~~iD~d~Le~~l~~----~~p 252 (419)
..+|+...-.|.|.. .+. ++..+. .+..++++.... ....|++.+++.+.+ .+.
T Consensus 127 r~~ii~~~~~yHG~t-~~~------~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~i 199 (421)
T PRK06777 127 RPGVIAFGGAFHGRT-LLT------MALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADIAPDQV 199 (421)
T ss_pred CCeEEEEcCCcCCcc-HHH------HhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhccCCCce
Confidence 346887765544431 111 111110 011122221000 011246778887753 235
Q ss_pred eEEEEcCCC--CC----CcCChHHHHHHHHHhCCEEEEeccccccccccCCcCC--CCC-CCcEEEeCCCCcC-CCCCee
Q 014724 253 KLIIAGASA--YP----RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK-YCDVVTTTTHKSL-RGPRGG 322 (419)
Q Consensus 253 klIi~~~s~--~p----~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~--~~~-~~Div~~S~hK~l-~GprgG 322 (419)
.+|++..-. .+ ....+++|+++|++||+++|+|++|. |+...|.... .++ ..|++ +++|.+ +|++.|
T Consensus 200 aavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-g~gr~g~~~~~~~~~~~pDiv--~~sK~l~~G~pig 276 (421)
T PRK06777 200 AAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQT-GFARTGKLFAMEYYDVKPDLI--TMAKSLGGGMPIS 276 (421)
T ss_pred EEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCccCCchhhhhhcCCCCCEE--eeehhhcCCCceE
Confidence 667765321 11 12238999999999999999999964 6644442111 112 35766 579998 577889
Q ss_pred EEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC
Q 014724 323 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL 393 (419)
Q Consensus 323 ~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~ 393 (419)
++++++ ++.+.+.......+.+++.. ..++...+|+.+.+ +...+++.+..++|.+.|++.
T Consensus 277 av~~~~------~i~~~~~~~~~~~T~~~~p~-~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~L~~l 337 (421)
T PRK06777 277 AVVGRA------EVMDAPAPGGLGGTYAGNPL-AVAAALAVLDVIAE---EKLCQRALILGAHLVEVLEKA 337 (421)
T ss_pred EEEEcH------HHHhccCCCCCCCCCCcCHH-HHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHH
Confidence 999887 67666654333333333333 33343446665543 345677777788888888764
No 318
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.06 E-value=2.5e-08 Score=104.16 Aligned_cols=262 Identities=14% Similarity=0.047 Sum_probs=135.4
Q ss_pred hccccccc--CC---CChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcC-CCCCCCceeEecCC
Q 014724 103 KSLELIAS--EN---FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN-LDENKWGVNVQPLS 176 (419)
Q Consensus 103 ~~i~L~~s--en---~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g-~~~~~~~v~V~~~s 176 (419)
..|++..+ .+ .-+|.|.+|+.+.+.. +...... +...++...+ ..+++.+++. .+.+ ...+++|
T Consensus 90 ~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~~-~~~~~~~--~~~~~~~~~~----lae~L~~~~~~~~~~---~v~f~~S 159 (504)
T PLN02760 90 KYLDALAGLWCTALGGSEPRLVAAATEQLNK-LPFYHSF--WNRTTKPSLD----LAKELLEMFTARKMG---KVFFTNS 159 (504)
T ss_pred EEEEcCcCHHhcccCCCCHHHHHHHHHHHhh-ccceecc--cccCcHHHHH----HHHHHHhhcCCCCCC---EEEEeCC
Confidence 34666653 22 2479999999988853 3211110 0011222222 3356666643 2221 2256788
Q ss_pred hHHHHHHHHHHcc-------CCC-CEEEEeCCCCCccccCccccccccccccccc------------cEEEecccC----
Q 014724 177 GSPANFEVYTAIL-------KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY------------FESMPYRLD---- 232 (419)
Q Consensus 177 Gt~A~~~~~~all-------~pG-D~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~------------~~~v~~~~~---- 232 (419)
|++|+..++.... .++ .+|+..+-.|.|... + .+++.|.. +..++++..
T Consensus 160 GsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~-~------a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~ 232 (504)
T PLN02760 160 GSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTL-I------SASLSGLPALHQKFDLPAPFVLHTDCPHYWRFH 232 (504)
T ss_pred hHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChH-h------hhhccCChhhccCCCCCCCCcEEeCCCcccccC
Confidence 9999999987652 233 578877755433321 1 11112210 111221100
Q ss_pred -CCCC-----CCCHHHHHHHhhh---cCCeEEEEcCC--CCCCcCC----hHHHHHHHHHhCCEEEEeccc-cccccccC
Q 014724 233 -ESTG-----LVDYDMLEKTAIL---FRPKLIIAGAS--AYPRDFD----YPRMRQIADAVGALLMMDMAH-ISGLVAAS 296 (419)
Q Consensus 233 -~~~~-----~iD~d~Le~~l~~---~~pklIi~~~s--~~p~~~d----l~~I~~ia~~~ga~livD~ah-~~Gl~~~g 296 (419)
+... ...++++++++.+ .++.+||+..- ..+...+ +++|+++|++||+++|+||+| ++|-++..
T Consensus 233 ~~~~~~~~~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~ 312 (504)
T PLN02760 233 LPGETEEEFSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTM 312 (504)
T ss_pred CCCCcHHHHHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchh
Confidence 0000 0113557776642 23556776531 1223333 899999999999999999998 34444321
Q ss_pred CcCCCCC-CCcEEEeCCCCcCCC--CCeeEEEEeCCCcchhhHHHHhhhc-------ccCCCCCCChHHHHHHHHHHHHH
Q 014724 297 VVADPFK-YCDVVTTTTHKSLRG--PRGGMIFFKKDPVLGVELESAINNA-------VFPGLQGGPHNHTIGGLAVCLKH 366 (419)
Q Consensus 297 ~~~~~~~-~~Div~~S~hK~l~G--prgG~i~~~~~~~~~~~l~~~i~~~-------~~~~~~g~p~~~~iaala~al~~ 366 (419)
--..-++ ..|+++ +.|.++| .+.|.+++++ ++.+.+... ...++.++. +...++...+|+.
T Consensus 313 ~a~e~~gv~PDivt--lgK~lggG~~PigAv~~~~------~i~d~~~~~~~~~~~~~h~~T~~gn-Pl~~Aaala~Le~ 383 (504)
T PLN02760 313 FGCDKYNIKPDLVS--LAKALSSAYMPIGAVLVSP------EISDVIHSQSNKLGSFAHGFTYSGH-PVSCAVALEALKI 383 (504)
T ss_pred hHHHhcCCCCcEEE--ecccccCCccccceEeecH------HHHhhhhcccccccCcccCCCCCCC-HHHHHHHHHHHHH
Confidence 0001111 357755 5799955 1345566776 566655421 122333342 3333333335666
Q ss_pred hcChHHHHHHHHHHHHHHHHHHHHHhC
Q 014724 367 AQSPEFKVYQNKVVSNCRALASRLVEL 393 (419)
Q Consensus 367 ~~~~~~~~~~~~v~~n~~~l~~~L~~~ 393 (419)
+.++ ...+++.++.++|.+.|+++
T Consensus 384 i~~~---~l~~~~~~~g~~l~~~L~~l 407 (504)
T PLN02760 384 YKER---NIPEHVNKIAPRFQDGIKAF 407 (504)
T ss_pred HHhC---CHHHHHHHHHHHHHHHHHHH
Confidence 6533 45677777788888888763
No 319
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.05 E-value=4.6e-08 Score=100.22 Aligned_cols=253 Identities=14% Similarity=0.076 Sum_probs=132.9
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHcc--CC
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--KP 191 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all--~p 191 (419)
-+|.|.+|+.+.+.. ... .....+ .++. .+ ...+++.+++.....+ ..++.+||++|++.++.... ..
T Consensus 57 ~~p~v~~ai~~ql~~-~~~--~~~~~~-~~~~--~~--~la~~l~~~~p~~~~~--~~~f~~sGseA~e~AlklAr~~tg 126 (421)
T PRK09792 57 RHPDLVAAVEQQLQQ-FTH--TAYQIV-PYES--YV--TLAEKINALAPVSGQA--KTAFFTTGAEAVENAVKIARAHTG 126 (421)
T ss_pred CCHHHHHHHHHHHHh-ccC--cccCcc-CCHH--HH--HHHHHHHHhCCCCCCc--eEEEeCChHHHHHHHHHHHHHhcC
Confidence 478888888887753 221 110011 1121 12 2335566665422101 23667899999998885442 22
Q ss_pred CCEEEEeCCCCCccccCccccccc--cccccc-----cccEEEecccCCCCCC---CCHHHHHHHhhh----cCCeEEEE
Q 014724 192 HDRIMGLDLPHGGHLSHGFMTPKR--RVSGTS-----IYFESMPYRLDESTGL---VDYDMLEKTAIL----FRPKLIIA 257 (419)
Q Consensus 192 GD~Vl~~~~~~~g~~s~~~~~~~~--~i~~~g-----~~~~~v~~~~~~~~~~---iD~d~Le~~l~~----~~pklIi~ 257 (419)
..+|+...-.|.|... +...... .....+ ..+..++++.+. ++. -|++.+++.+++ .++++|++
T Consensus 127 r~~ii~~~~~yHG~t~-~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~-~~~~~~~~~~~l~~~~~~~~~~~~iaavi~ 204 (421)
T PRK09792 127 RPGVIAFSGGFHGRTY-MTMALTGKVAPYKIGFGPFPGSVYHVPYPSDL-HGISTQDSLDAIERLFKSDIEAKQVAAIIF 204 (421)
T ss_pred CCeEEEECCCcCCccH-HHHhhcCCCcccccCCCCCCCCcEEcCCCccc-ccccHHHHHHHHHHHHHhccCCCceEEEEE
Confidence 3478887765444311 1000000 000000 012334443221 111 245788888763 35678887
Q ss_pred cCCCCCC---cCC---hHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC----CCcEEEeCCCCcC-CCCCeeEEEE
Q 014724 258 GASAYPR---DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----YCDVVTTTTHKSL-RGPRGGMIFF 326 (419)
Q Consensus 258 ~~s~~p~---~~d---l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~----~~Div~~S~hK~l-~GprgG~i~~ 326 (419)
....++. ..+ +++|+++|++||+++|+|+++ .|+...|.. ..++ ..|+ .+++|++ +|.+.|++++
T Consensus 205 EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~-tg~gr~G~~-~a~~~~~~~pDi--~t~gK~l~~G~pigav~~ 280 (421)
T PRK09792 205 EPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQ-SGFARTGKL-FAMDHYADKPDL--MTMAKSLAGGMPLSGVVG 280 (421)
T ss_pred ccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccc-cCCCCCCch-hHHHhcCCCCcE--EEeehhhcCCCceEEEEE
Confidence 7543331 223 789999999999999999996 455433321 1111 3565 5668998 5678899988
Q ss_pred eCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHh
Q 014724 327 KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE 392 (419)
Q Consensus 327 ~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~ 392 (419)
++ ++.+.+.......+.++......+++ ..++.+.++ ...+++.+..+++.+.|++
T Consensus 281 ~~------~i~~~~~~~~~~~T~~gnpl~~aaa~-a~l~~l~~~---~~~~~~~~~g~~l~~~l~~ 336 (421)
T PRK09792 281 NA------NIMDAPAPGGLGGTYAGNPLAVAAAH-AVLNIIDKE---SLCERANQLGQRLKNTLID 336 (421)
T ss_pred cH------HHHhccCCCCcCCCCCCCHHHHHHHH-HHHHHHHhh---hHHHHHHHHHHHHHHHHHH
Confidence 87 56666543322233333333323232 345544322 3455555666666666654
No 320
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.05 E-value=1.9e-08 Score=103.10 Aligned_cols=254 Identities=17% Similarity=0.113 Sum_probs=133.7
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHcc----
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all---- 189 (419)
-+|.|.+|+.+.+.. ....... . +. ++ .+....+++.+++.-..+ ...+.+||++|++.++....
T Consensus 59 ~~p~v~~ai~~q~~~-~~~~~~~-~-~~-~~----~~~~la~~l~~~~p~~~~---~v~f~~sGseA~e~A~klar~~~~ 127 (423)
T PRK05964 59 NHPYIDQAIREQLDR-LDHVIFA-G-FT-HE----PAERLAQRLVALTPGGLD---HVFFSDSGSVAVEVALKMALQYWR 127 (423)
T ss_pred CCHHHHHHHHHHHhh-CCCcccc-c-cC-CH----HHHHHHHHHHHhCCCCCC---EEEEeCCcHHHHHHHHHHHHHHHH
Confidence 478999998887753 2111100 0 11 12 122234667777642221 12567789999998886442
Q ss_pred ---CCC-CEEEEeCCCCCccccCcccccc-ccc---ccccc--ccEEEecccCCCCCCCCHHHHHHHhhhc--CCeEEEE
Q 014724 190 ---KPH-DRIMGLDLPHGGHLSHGFMTPK-RRV---SGTSI--YFESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIA 257 (419)
Q Consensus 190 ---~pG-D~Vl~~~~~~~g~~s~~~~~~~-~~i---~~~g~--~~~~v~~~~~~~~~~iD~d~Le~~l~~~--~pklIi~ 257 (419)
++| .+|+...-.|.|.. .+..... ... ...+. .+..++++.+ +....+++.+++.+.+. +..+|++
T Consensus 128 ~~~~~~r~~ii~~~~~yHG~t-~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~l~~~l~~~~~~iaavi~ 205 (423)
T PRK05964 128 NRGEPGRSRFLSLRGGYHGDT-IGTMSVGDRGGMHALYTPLLFEQVTAPFPPD-GYEQATLDALEALLEKHAGEIAAFIV 205 (423)
T ss_pred hcCCCCCcEEEEEcCCcCCcc-HHHHhcCCCccccccccCcCCCCEEeCCCcc-hhHHHHHHHHHHHHHhCCCcEEEEEE
Confidence 123 57888776554431 1110000 000 00000 1223333221 01122378888888642 3456666
Q ss_pred cC--CC-CC----CcCChHHHHHHHHHhCCEEEEeccccccccccCCc-C-CCCC-CCcEEEeCCCCcCCC--CCeeEEE
Q 014724 258 GA--SA-YP----RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLRG--PRGGMIF 325 (419)
Q Consensus 258 ~~--s~-~p----~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~-~-~~~~-~~Div~~S~hK~l~G--prgG~i~ 325 (419)
.. .. .+ ....+++|+++|++||+++|+|++| .|+...|.. . ..++ ..|+++ ++|+|.| .+.|+++
T Consensus 206 Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~-tg~gr~G~~~a~~~~~v~pDi~~--~~K~l~gG~~p~~av~ 282 (423)
T PRK05964 206 EPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIA-TGFGRTGTLFACEQAGVSPDIMC--LSKGLTGGYLPLAATL 282 (423)
T ss_pred ecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechh-hCCCcCcchhHHHhcCCCCCeee--eehhhhcCcccceEEE
Confidence 53 11 22 2234899999999999999999998 555333321 0 1111 357765 5699954 3677788
Q ss_pred EeCCCcchhhHHHHhhhc------ccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC
Q 014724 326 FKKDPVLGVELESAINNA------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL 393 (419)
Q Consensus 326 ~~~~~~~~~~l~~~i~~~------~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~ 393 (419)
+++ ++.+.+... .+.++.+ .+....++...+++.+..+ .+.+++.++.+++.+.|++.
T Consensus 283 ~~~------~i~~~~~~~~~~~~~~~~~T~~-~np~~~aaa~a~l~~l~~~---~~~~~~~~~g~~l~~~l~~l 346 (423)
T PRK05964 283 CTA------EIFEAFYSDDRAKAFMHSPSYT-ANPLACAAANASLDLFEDE---PVLERVAALSAGLAEGLEPF 346 (423)
T ss_pred EcH------HHHHhhhcCCcccccccCCCCC-cCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHhh
Confidence 876 666665421 1111122 2333344444456655432 35677777788888888775
No 321
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.04 E-value=2.8e-08 Score=102.77 Aligned_cols=247 Identities=15% Similarity=0.101 Sum_probs=129.4
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHcc----
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all---- 189 (419)
-+|.|.+|+.+.+..- .. . .+++. ++ ......+++.+++..+.+ ...+.+||++|+..++....
T Consensus 99 ~~p~v~~Ai~~ql~~l-~~--~-~~~~~-~~----~~~~lae~L~~~~p~~~~---~v~f~~SGsEAve~AlklAr~~t~ 166 (459)
T PRK11522 99 RNPVVVSAVQNQLAKQ-PL--H-SQELL-DP----LRAMLAKTLAALTPGKLK---YSFFCNSGTESVEAALKLAKAYQS 166 (459)
T ss_pred CCHHHHHHHHHHHhhC-cc--c-ccccC-CH----HHHHHHHHHHHhCCCCCC---EEEEeCCchHHHHHHHHHHHHHhc
Confidence 4799999998887532 11 1 11121 22 222234666666543222 22566789999998886442
Q ss_pred CCC-CEEEEeCCCCCccccCccccccccccccccc-cEEEec-ccCCCC---CCCCHHHHHHHhhh-----cCCeEEEEc
Q 014724 190 KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPY-RLDEST---GLVDYDMLEKTAIL-----FRPKLIIAG 258 (419)
Q Consensus 190 ~pG-D~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~-~~~v~~-~~~~~~---~~iD~d~Le~~l~~-----~~pklIi~~ 258 (419)
++| .+|+...-.|.|.. .+ .++.++.. +. .++ +..+.. ...|.+++++.+++ .+..+|++.
T Consensus 167 ~~gr~~ii~~~~~yHG~t-~~------~ls~~~~~~~~-~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~iAavIvE 238 (459)
T PRK11522 167 PRGKFTFIATSGAFHGKS-LG------ALSATAKSTFR-KPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDDVAAVILE 238 (459)
T ss_pred cCCCcEEEEecCCCCCCc-HH------HhhhcCCcccc-cCCCCCCCCCcccCCCCHHHHHHHHHHhhccCCcEEEEEEe
Confidence 123 36777765543321 11 11122210 00 000 000000 12378888888753 234566665
Q ss_pred C--CCCCCcCC----hHHHHHHHHHhCCEEEEeccccccccccCCcC--CCCC-CCcEEEeCCCCcCCC--CCeeEEEEe
Q 014724 259 A--SAYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLRG--PRGGMIFFK 327 (419)
Q Consensus 259 ~--s~~p~~~d----l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~--~~~~-~~Div~~S~hK~l~G--prgG~i~~~ 327 (419)
. +..+...+ +++++++|++||+++|+||+| .|+.-.|... ..++ ..|++ ++.|.++| .+.|.++++
T Consensus 239 pv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~-tG~GRtG~~~a~e~~gv~PDiv--t~gK~lggG~~Pigav~~~ 315 (459)
T PRK11522 239 PIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQ-TGMGRTGKMFACEHENVQPDIL--CLAKALGGGVMPIGATIAT 315 (459)
T ss_pred cccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccce-ecCCccchhhhhhccCCCCCEE--EechhhhCCCccceeEEEc
Confidence 3 12222233 899999999999999999998 3542222210 1111 35877 56899954 244555555
Q ss_pred CCCcchhhHHHHhhhc--ccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC
Q 014724 328 KDPVLGVELESAINNA--VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL 393 (419)
Q Consensus 328 ~~~~~~~~l~~~i~~~--~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~ 393 (419)
+ ++.+.+... .+..+.++.. ...++..+.|+.+.++ ...+++.++.++|.+.|+++
T Consensus 316 ~------~i~~~~~~~~~~~~~T~~gnp-~~~Aaala~L~~i~~~---~l~~~~~~~g~~l~~~L~~l 373 (459)
T PRK11522 316 E------EVFSVLFDNPFLHTTTFGGNP-LACAAALATINVLLEQ---NLPAQAEQKGDYLLDGFRQL 373 (459)
T ss_pred H------HHHHHhccCCcccCCCCCCCH-HHHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHHH
Confidence 5 454444211 1222333322 2333333457666543 35677778888888888774
No 322
>PRK07046 aminotransferase; Validated
Probab=99.04 E-value=3.4e-08 Score=101.96 Aligned_cols=244 Identities=14% Similarity=0.085 Sum_probs=131.2
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHcc--CC
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--KP 191 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all--~p 191 (419)
-+|.|.+|+.+.+......+.+ + +.+.+..+++.++++.+. + .+.+|||+|++.++.... ..
T Consensus 92 ~~p~i~~Av~~q~~~~~~~~~~-------~----~~~~~lAe~l~~~~~~~~----v-~F~nSGtEA~e~AlrlAR~~TG 155 (453)
T PRK07046 92 SPAPVARALAEQARRGLTTMLP-------S----EDAAWVGEELARRFGLPY----W-QVATTATDANRFVLRWARAVTG 155 (453)
T ss_pred CCHHHHHHHHHHHHhCCCCCCC-------C----HHHHHHHHHHHHHhCCCE----E-EEECCHHHHHHHHHHHHHHhhC
Confidence 3689999998887643221211 1 223334567777776432 2 567899999998886442 23
Q ss_pred CCEEEEeCCCCCccccCcccc--cccc---cccccccc----EEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCC--
Q 014724 192 HDRIMGLDLPHGGHLSHGFMT--PKRR---VSGTSIYF----ESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS-- 260 (419)
Q Consensus 192 GD~Vl~~~~~~~g~~s~~~~~--~~~~---i~~~g~~~----~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s-- 260 (419)
.++|+...-.|.|+....... .... ....|... ....++ ..|++.+++.+...+...||+..-
T Consensus 156 r~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~------~nd~~~l~~~l~~~~vAavi~EPi~g 229 (453)
T PRK07046 156 RPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVE------FNDLAALEAALADGDVAAVLAEPAMT 229 (453)
T ss_pred CCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeC------CCCHHHHHHHhCCCCeEEEEECCCCC
Confidence 467887765544431000000 0000 00001000 011111 238899999886445677777642
Q ss_pred CCCC----cCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC-CCcEEEeCCCCcCC-CCCeeEEEEeCCCcchh
Q 014724 261 AYPR----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLR-GPRGGMIFFKKDPVLGV 334 (419)
Q Consensus 261 ~~p~----~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~-~~Div~~S~hK~l~-GprgG~i~~~~~~~~~~ 334 (419)
+.+. ..-+++++++|++||+++|.||++.++....+ ....++ ..|+++ +.|.++ |...|.+.+++
T Consensus 230 ~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~tfr~g~Gg-~~~~~gv~PDi~t--~gK~lggG~Pi~av~g~~------ 300 (453)
T PRK07046 230 NIGMVLPEPGFHEALRELTRRYGTLLVIDETHTISSGPGG-YTRAHGLEPDFLV--VGKPIAGGVPCAVYGFSA------ 300 (453)
T ss_pred CCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccCccCCcc-hhHHhCCCcccee--ehhhhcCCCcceeeeehH------
Confidence 1121 12379999999999999999999853211111 111122 468876 589984 55678888877
Q ss_pred hHHHHhhhcc---------cCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHh
Q 014724 335 ELESAINNAV---------FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE 392 (419)
Q Consensus 335 ~l~~~i~~~~---------~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~ 392 (419)
++.+.+.... ..++.++ ++...++....|+.+.+++ ..+++.+.-++|.+.|++
T Consensus 301 ~i~~~~~~~~~~~~~~~~~~~~T~~g-npl~~aa~~a~L~~l~~~~---~~~~~~~~g~~l~~~L~~ 363 (453)
T PRK07046 301 ELAERAQAAKASAPPGHSGIGTTLSA-NALAMAAMRATLAEVMTEA---AYAHMLALAARLAAGLRA 363 (453)
T ss_pred HHHHHHhhccccCCCCCceeCCCCcc-cHHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHH
Confidence 5666654210 1112222 2222333333566554433 345555566667666654
No 323
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=99.02 E-value=4.7e-09 Score=103.09 Aligned_cols=242 Identities=18% Similarity=0.196 Sum_probs=148.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHcc---CCC----------CEEEEeCCCCCccccCcccccc
Q 014724 148 ELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---KPH----------DRIMGLDLPHGGHLSHGFMTPK 214 (419)
Q Consensus 148 ~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all---~pG----------D~Vl~~~~~~~g~~s~~~~~~~ 214 (419)
.+|+++-.+..++.|.+...+ .++..+|+-+|..++.+-. -|+ +-|+-.+ .-+|+|.-
T Consensus 141 lmE~~vl~km~~ivGw~~~~D--gIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtS--eesHYSi~----- 211 (510)
T KOG0629|consen 141 LMEEEVLAKMREIVGWEEGGD--GIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTS--EESHYSIK----- 211 (510)
T ss_pred eehHHHHHHHHHHhCCCCCCC--ceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEec--ccchhhHH-----
Confidence 445556677778889987533 4667778877776654431 122 3344332 23444321
Q ss_pred cccccccccc-EEEecccCCCCCCCCHHHHHHHhhhcC-----CeEEEE--cCCCCCCcCChHHHHHHHHHhCCEEEEec
Q 014724 215 RRVSGTSIYF-ESMPYRLDESTGLVDYDMLEKTAILFR-----PKLIIA--GASAYPRDFDYPRMRQIADAVGALLMMDM 286 (419)
Q Consensus 215 ~~i~~~g~~~-~~v~~~~~~~~~~iD~d~Le~~l~~~~-----pklIi~--~~s~~p~~~dl~~I~~ia~~~ga~livD~ 286 (419)
+.....|.+. ..+.++.+ +.|.+++++||+.|.+.+ |-+|-+ +.+.++.-.|++.|+++|++|+.|++||+
T Consensus 212 kaAa~lg~gtd~c~~v~t~-e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmHvDA 290 (510)
T KOG0629|consen 212 KAAAFLGLGTDHCIKVKTD-ERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKHKLWMHVDA 290 (510)
T ss_pred HHHHHhccCCceeEEeccc-ccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhcCEEEEeec
Confidence 2233445432 23344455 579999999999986533 344433 33445666799999999999999999999
Q ss_pred cccccccccCCcCCCC---CCCcEEEeCCCCcCCCC-CeeEEEEeCCCcchhhHHHHhhhc----c----------c---
Q 014724 287 AHISGLVAASVVADPF---KYCDVVTTTTHKSLRGP-RGGMIFFKKDPVLGVELESAINNA----V----------F--- 345 (419)
Q Consensus 287 ah~~Gl~~~g~~~~~~---~~~Div~~S~hK~l~Gp-rgG~i~~~~~~~~~~~l~~~i~~~----~----------~--- 345 (419)
|.+-|+.....+...+ +.+|.|+-+.||.++.| +++.++++.+ .+.+.-++. . +
T Consensus 291 AwGGglLmS~k~R~kl~Giera~SvtwnpHK~~gaplqCsa~l~r~~-----gll~~Cn~~~A~YLFq~dK~YdvS~DTg 365 (510)
T KOG0629|consen 291 AWGGGLLMSRKHRHKLTGIERANSVTWNPHKLMGAPLQCSAFLTREE-----GLLQRCNQMSAIYLFQQDKFYDVSYDTG 365 (510)
T ss_pred ccccccccChhhHhhccCccccCceeecHHHhhcCcchhhHHHHHHH-----HHHHhhcccchhhhhccCceeecccccc
Confidence 9765565433222222 36899999999988666 6676666654 232222110 0 0
Q ss_pred -CCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEEecCCCcce
Q 014724 346 -PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNH 405 (419)
Q Consensus 346 -~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~~~~t~~h 405 (419)
-..|.|-|+..+ -+..-++.-...++++.+.+..+++++|.+.|+++ |+..+-.....|
T Consensus 366 dK~iQCGRh~D~F-KlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe~ 426 (510)
T KOG0629|consen 366 DKAIQCGRHVDVF-KLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPEH 426 (510)
T ss_pred cchhhcCccccHH-HHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCCce
Confidence 113445444332 12333444445678899999999999999999997 666554333334
No 324
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.01 E-value=1.7e-07 Score=92.67 Aligned_cols=224 Identities=19% Similarity=0.139 Sum_probs=137.6
Q ss_pred HHHHHHHHcCCCCCCCceeEecCC-hHHHHHHHHHHc---cCCCCEEEEeCCCCCccccCccccccccccccccccEEEe
Q 014724 153 CQKRALAAFNLDENKWGVNVQPLS-GSPANFEVYTAI---LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMP 228 (419)
Q Consensus 153 ~~~~la~~~g~~~~~~~v~V~~~s-Gt~A~~~~~~al---l~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~ 228 (419)
.|..++++.|++-. |-...- +|.+-+++.++. -++..+++++.-.|.-++..- .-...+.+++++.
T Consensus 125 fQtlv~dLTGm~VA----NASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl------~Tra~~~g~~i~~ 194 (450)
T COG0403 125 FQTLVADLTGLDVA----NASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVL------RTRAEGLGIEIEV 194 (450)
T ss_pred HHHHHHHHhCCCcc----cchhhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHH------HhhcccCceEEEE
Confidence 56778899999873 332232 455555555555 234689999887665554210 0123455556655
Q ss_pred cccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC-C-CcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC-CC
Q 014724 229 YRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY-P-RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YC 305 (419)
Q Consensus 229 ~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~-p-~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~-~~ 305 (419)
++.+ |.+.+++. ....+..+++.+|++ + ...|+++|.+++|++|+++++= +..++-+.+..|-+ |+
T Consensus 195 ~~~~------d~~~l~~~-~~~~~~gv~vQyP~~~G~~~~d~~~l~~~~h~~~al~~v~----aDplaL~LL~pPGe~GA 263 (450)
T COG0403 195 VDAD------DLDDLESA-DDGDVFGVLVQYPNTFGIVEEDLRALIEAAHSAGALVIVA----ADPLALGLLKPPGEFGA 263 (450)
T ss_pred eccc------hhhhhhhc-cccCeEEEEEecCCCCCccchhHHHHHHHHhhcCCEEEEE----echhHhhccCCccccCC
Confidence 4432 77888887 444677889988885 4 4567999999999999988762 22222223334444 89
Q ss_pred cEEEeCCCC-----cCCCCCeeEEEEeCCCc---c-------------------hhhHHHHhhhcccCCCCCCChHHHHH
Q 014724 306 DVVTTTTHK-----SLRGPRGGMIFFKKDPV---L-------------------GVELESAINNAVFPGLQGGPHNHTIG 358 (419)
Q Consensus 306 Div~~S~hK-----~l~GprgG~i~~~~~~~---~-------------------~~~l~~~i~~~~~~~~~g~p~~~~ia 358 (419)
||++++++- +|+||..|++.++++.. + +-.-+++|+...-.. .--.+..+.
T Consensus 264 DIvvG~~QrfGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATS--NICTnQaLl 341 (450)
T COG0403 264 DIVVGSAQRFGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATS--NICTNQALL 341 (450)
T ss_pred ceEEecCcccCCCcCCCCcceeeeeEhHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccch--hhhHHHHHH
Confidence 999999997 46899999999988511 0 011123343321111 000112222
Q ss_pred HHHHH--HHHhcChHHHHHHHHHHHHHHHHHHHHHhC--CcEEec
Q 014724 359 GLAVC--LKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLVS 399 (419)
Q Consensus 359 ala~a--l~~~~~~~~~~~~~~v~~n~~~l~~~L~~~--G~~v~~ 399 (419)
|++.+ +..+...++++..+++.+.+.+++++|++. |+++..
T Consensus 342 A~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~ 386 (450)
T COG0403 342 ALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELVF 386 (450)
T ss_pred HHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEecc
Confidence 33322 222334567999999999999999999964 688774
No 325
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.01 E-value=5.7e-08 Score=100.19 Aligned_cols=254 Identities=13% Similarity=0.042 Sum_probs=130.1
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHc--cCC
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKP 191 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~al--l~p 191 (419)
-+|.|.+|+.+.+.+ ... +... ...++ ...++.+++.+++.....+ ...+++||++|+..++... ...
T Consensus 73 ~~p~v~~ai~~q~~~-~~~-~~~~--~~~~~----~~~~la~~l~~~~p~~~~~--~v~f~~sGseA~e~AlklAr~~tg 142 (443)
T PRK06058 73 SAPRVVEAVREQVAR-FTH-TCFM--VTPYE----GYVAVAEQLNRLTPGDHEK--RSALFNSGAEAVENAVKIARSYTG 142 (443)
T ss_pred CCHHHHHHHHHHHHh-ccC-cccc--ccCCH----HHHHHHHHHHHhCCCCCCC--EEEEeCCcHHHHHHHHHHHHHhhC
Confidence 478999998888754 211 1100 01112 2222446677776432111 2367789999999888632 123
Q ss_pred CCEEEEeCCCCCccccCccccccc--cccccc-----cccEEEecc--cCC-CCCCC--------CHHHHHHHhhhcCCe
Q 014724 192 HDRIMGLDLPHGGHLSHGFMTPKR--RVSGTS-----IYFESMPYR--LDE-STGLV--------DYDMLEKTAILFRPK 253 (419)
Q Consensus 192 GD~Vl~~~~~~~g~~s~~~~~~~~--~i~~~g-----~~~~~v~~~--~~~-~~~~i--------D~d~Le~~l~~~~pk 253 (419)
.++|+.....|.|.. .+...... .....+ ..+..++++ .+. .+... .++.+++.+...++.
T Consensus 143 r~~ii~~~~~yHG~t-~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iA 221 (443)
T PRK06058 143 RQAVVVFDHAYHGRT-NLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQVGADNLA 221 (443)
T ss_pred CCeEEEECCCcCcCh-HHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHHHHHHHhhCCCceE
Confidence 378888876654432 01000000 000000 001112211 110 00011 123333433323567
Q ss_pred EEEEcCCCCC---C----cCChHHHHHHHHHhCCEEEEeccccccccccCCcC--CCCC-CCcEEEeCCCCcC-CCCCee
Q 014724 254 LIIAGASAYP---R----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSL-RGPRGG 322 (419)
Q Consensus 254 lIi~~~s~~p---~----~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~--~~~~-~~Div~~S~hK~l-~GprgG 322 (419)
+|++.. ..+ . ..-+++|+++|++||+++|.||++ .|+...|... ..++ ..|+++. .|.+ +|.+.|
T Consensus 222 avi~EP-i~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~-tGfgRtG~~fa~~~~gv~PDiv~~--gK~l~~G~Pi~ 297 (443)
T PRK06058 222 AVIIEP-IQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQ-TGFARTGAWFACEHEGIVPDLITT--AKGIAGGLPLS 297 (443)
T ss_pred EEEECC-ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccc-cCCCcChhhhHHHhcCCCCCEEEE--cccccCCCccE
Confidence 777653 222 1 223899999999999999999996 4653333211 1111 3588876 5998 566788
Q ss_pred EEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHh
Q 014724 323 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE 392 (419)
Q Consensus 323 ~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~ 392 (419)
++++++ ++.+.+.......+.++. ....++...+|+.+.++ ...+++.+..++|.+.|++
T Consensus 298 av~~~~------~i~~~~~~~~~~~T~~gn-pl~~aaa~a~L~~~~~~---~l~~~~~~~g~~l~~~L~~ 357 (443)
T PRK06058 298 AVTGRA------EIMDAPHPGGLGGTYGGN-PVACAAALAAIETIEED---DLVARARQIEALMTDRLRA 357 (443)
T ss_pred EEEEcH------HHHhhccCCCCCCCCCCC-HHHHHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHHHH
Confidence 888887 566655433222333332 22333333456555432 3456666667778888866
No 326
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.00 E-value=4.6e-08 Score=100.29 Aligned_cols=254 Identities=17% Similarity=0.100 Sum_probs=131.1
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHcc--CC
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--KP 191 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all--~p 191 (419)
-+|.|.+|+.+.+.+- .. .... .+ .++ ... ...+++.+++.-...+ -..+.+||++|+..++.... ..
T Consensus 57 ~~p~v~~ai~~ql~~l-~~-~~~~-~~-~~~---~~~-~la~~l~~~~p~~~~~--~v~f~~SGseA~e~AlklAr~~tg 126 (425)
T PRK07495 57 RHPRVIAAVKAQLDRF-TH-TCHQ-VV-PYE---NYV-RLAERLNALVPGDFAK--KTIFVTTGAEAVENAVKIARAATG 126 (425)
T ss_pred CCHHHHHHHHHHHhhc-cC-cccC-cc-CCH---HHH-HHHHHHHHhCCCCCCC--EEEECCchHHHHHHHHHHHHHhhC
Confidence 4788999988877542 11 0000 01 112 111 2346677776432111 23567889999998886442 23
Q ss_pred CCEEEEeCCCCCccccCccccc------c-ccccccccccEEEecccCCCCCC---CCHHHHHHHhhh----cCCeEEEE
Q 014724 192 HDRIMGLDLPHGGHLSHGFMTP------K-RRVSGTSIYFESMPYRLDESTGL---VDYDMLEKTAIL----FRPKLIIA 257 (419)
Q Consensus 192 GD~Vl~~~~~~~g~~s~~~~~~------~-~~i~~~g~~~~~v~~~~~~~~~~---iD~d~Le~~l~~----~~pklIi~ 257 (419)
..+|+...-.|.|.. .+.... . ....-.-..+..++++.+ ..+. -+++++++.+.. .++++|++
T Consensus 127 r~~ii~~~~~yHG~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~l~~~~~~~~~~~~iaavi~ 204 (425)
T PRK07495 127 RSAVIAFGGGFHGRT-FMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVE-LHGVSVEQSLAALDKLFKADVDPQRVAAIII 204 (425)
T ss_pred CCeEEEECCCcCCcc-HHHhhhcCCCcccccCCCCCCCCeEEecCCcc-cccccHHHHHHHHHHHHHhccCCCceEEEEE
Confidence 457887765543431 010000 0 000000011233343321 1111 124556776642 34667777
Q ss_pred cCC--CCCC----cCChHHHHHHHHHhCCEEEEeccccccccccCCcC--CCCC-CCcEEEeCCCCcC-CCCCeeEEEEe
Q 014724 258 GAS--AYPR----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSL-RGPRGGMIFFK 327 (419)
Q Consensus 258 ~~s--~~p~----~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~--~~~~-~~Div~~S~hK~l-~GprgG~i~~~ 327 (419)
... +.+. ..-+++|+++|++||+++|.|++| .|+...|... ..++ ..|+ .+++|.+ .|.+.|+++++
T Consensus 205 EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~-tG~gr~G~~~a~~~~gv~pDi--~tlsK~l~~G~pigav~~~ 281 (425)
T PRK07495 205 EPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQ-TGFARTGKLFAMEHHEVAADL--TTMAKGLAGGFPLAAVTGR 281 (425)
T ss_pred CCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechh-hcCCcCCCceeecccCCCCCE--EeehhhhcCCccceEEEEc
Confidence 532 1121 123789999999999999999997 4654333211 1111 2455 5568998 56678999888
Q ss_pred CCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHh
Q 014724 328 KDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE 392 (419)
Q Consensus 328 ~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~ 392 (419)
+ ++.+.+.......+.+++... .++...+++.+.++ .+.+++.+..++|.+.|++
T Consensus 282 ~------~i~~~~~~~~~~~T~~~~pl~-~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~ 336 (425)
T PRK07495 282 A------EIMDAPGPGGLGGTYGGNPLG-IAAAHAVLDVIEEE---DLCERANQLGNRLKQRLAS 336 (425)
T ss_pred H------HHHhccCCCCcCCCCCCCHHH-HHHHHHHHHHHHhc---hHHHHHHHHHHHHHHHHHH
Confidence 7 566655433222333333333 33333456655433 3455666667777777765
No 327
>PRK06105 aminotransferase; Provisional
Probab=98.99 E-value=1.4e-07 Score=97.58 Aligned_cols=250 Identities=13% Similarity=0.019 Sum_probs=131.0
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHcc----
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all---- 189 (419)
-+|.|.+|+.+.+.+ .........+. ++ .+.++.+++.+++..+.+ ...+.+||++|+.+++....
T Consensus 65 ~~p~i~~Ai~~q~~~-~~~~~~~~~~~--~~----~~~~lae~L~~~~p~~~~---~v~f~~SGseAve~AlKlar~~~~ 134 (460)
T PRK06105 65 SEQRLVEAAARQMKK-LPFYHTFSHKS--HG----PVIDLAEKLVAMAPVPMS---KVFFTNSGSEANDTVVKLVWYYNN 134 (460)
T ss_pred CCHHHHHHHHHHHHh-CCCeecccccC--CH----HHHHHHHHHHHhCCCCCC---EEEEeCCcHHHHHHHHHHHHHHHH
Confidence 479999999988754 22111111111 12 112234677777653322 22556789999998887642
Q ss_pred ---CC-CCEEEEeCCCCCccccCcccccccccccccc------------ccEEEecccCCCCC-----------CCCHHH
Q 014724 190 ---KP-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLDESTG-----------LVDYDM 242 (419)
Q Consensus 190 ---~p-GD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~------------~~~~v~~~~~~~~~-----------~iD~d~ 242 (419)
.+ ..+|+...-.|.|... + .++..+. .+..++++.. ... ..++++
T Consensus 135 ~~g~t~r~~il~~~~~yHG~t~-~------a~s~t~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~~~~~~~~~ 206 (460)
T PRK06105 135 ALGRPEKKKIISRQRGYHGVTI-A------SASLTGLPNNHRSFDLPLDRILHTGCPHY-YRFGLPGESEEAFATRLANE 206 (460)
T ss_pred hcCCCCCcEEEEecCccCCcch-h------heeccCCcccccccCCCCCCCEEcCCCcc-cccccCCCChHHHHHHHHHH
Confidence 12 2468877655433321 1 1111110 1122222110 000 012466
Q ss_pred HHHHhhh---cCCeEEEEcCC--CCCCcCC----hHHHHHHHHHhCCEEEEeccc-cccccccCCcCCCCC-CCcEEEeC
Q 014724 243 LEKTAIL---FRPKLIIAGAS--AYPRDFD----YPRMRQIADAVGALLMMDMAH-ISGLVAASVVADPFK-YCDVVTTT 311 (419)
Q Consensus 243 Le~~l~~---~~pklIi~~~s--~~p~~~d----l~~I~~ia~~~ga~livD~ah-~~Gl~~~g~~~~~~~-~~Div~~S 311 (419)
+|+.+.. .++..||+..- +.+...+ +++|+++|++||+++|+||+| .+|.++..--..-++ ..|+++
T Consensus 207 le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v~PDi~~-- 284 (460)
T PRK06105 207 LEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGIKPDILV-- 284 (460)
T ss_pred HHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCCCCCeee--
Confidence 7777742 24567777641 2222222 799999999999999999997 344332110000111 357775
Q ss_pred CCCcCCC--CCeeEEEEeCCCcchhhHHHHhhhcc-------cCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHH
Q 014724 312 THKSLRG--PRGGMIFFKKDPVLGVELESAINNAV-------FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN 382 (419)
Q Consensus 312 ~hK~l~G--prgG~i~~~~~~~~~~~l~~~i~~~~-------~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n 382 (419)
+.|.++| .+.|.+++++ ++.+.+.... ..++.++.... .++....|+.+.++ ...+++.+.
T Consensus 285 ~gK~lggG~~P~~av~~~~------~i~~~~~~~~~~~~~~~h~~T~~gnpl~-~aaa~a~L~~i~~~---~l~~~v~~~ 354 (460)
T PRK06105 285 MSKQLSSSYQPLSAVLMNE------KVYDPIADESGKIGTFGHGFTASGHPVA-AAVALENLAIIEER---DLVGNAAER 354 (460)
T ss_pred eecccccCcccceEEEEcH------HHHHHHhcccccCcccccCCCCCCCHHH-HHHHHHHHHHHHhc---cHHHHHHHH
Confidence 5799954 2577777776 5665554210 11222332222 22223356666533 456777777
Q ss_pred HHHHHHHHHhC
Q 014724 383 CRALASRLVEL 393 (419)
Q Consensus 383 ~~~l~~~L~~~ 393 (419)
.++|.+.|+++
T Consensus 355 g~~l~~~L~~l 365 (460)
T PRK06105 355 GARLQARLRAL 365 (460)
T ss_pred HHHHHHHHHHh
Confidence 88888888764
No 328
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=98.98 E-value=1.2e-07 Score=96.38 Aligned_cols=265 Identities=18% Similarity=0.081 Sum_probs=137.2
Q ss_pred hcccccccC---C--CChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCCh
Q 014724 103 KSLELIASE---N--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG 177 (419)
Q Consensus 103 ~~i~L~~se---n--~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sG 177 (419)
..|++.++- | .-+|.|++|+.+.+..-. + ...++... +... ...+++.+++-.+.. ....+.+||
T Consensus 57 ~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~-h--~~~~~~~~-e~~v----~~ae~L~~~~p~~~~--~~~~f~~sG 126 (447)
T COG0160 57 EYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLN-H--THTRDLYY-EPYV----ELAEKLTALAPGSGL--KKVFFGNSG 126 (447)
T ss_pred EEEEcccCcchhccCCCCHHHHHHHHHHHHHhh-c--ccCCcccc-hhHH----HHHHHHHHhCCcccC--CeEEecCCc
Confidence 345665532 2 247999999988765321 1 11112211 2111 123556666554311 134667789
Q ss_pred HHHHHHHHHHc-c-CCCCEEEEeCCCCCccccCcccccc--ccccc-----cccccEEEecccCCC-CC--------CCC
Q 014724 178 SPANFEVYTAI-L-KPHDRIMGLDLPHGGHLSHGFMTPK--RRVSG-----TSIYFESMPYRLDES-TG--------LVD 239 (419)
Q Consensus 178 t~A~~~~~~al-l-~pGD~Vl~~~~~~~g~~s~~~~~~~--~~i~~-----~g~~~~~v~~~~~~~-~~--------~iD 239 (419)
++||..++... . .....|+...-.+.|.. ++....+ +.... ....+..+||+...- .+ .-.
T Consensus 127 aeA~E~AiKiAr~~Tgr~~viaf~~afHG~T-~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~ 205 (447)
T COG0160 127 AEAVEAAIKIARAYTGRPGVIAFDGAFHGRT-LGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDA 205 (447)
T ss_pred HHHHHHHHHHHHHHhCCCcEEEECCcccccc-hhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHH
Confidence 99999998544 1 22356776665543321 1111100 00000 011134455542110 01 112
Q ss_pred HHHHHHHhhh-----cCCeEEEEcCC--CCCC----cCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC----C
Q 014724 240 YDMLEKTAIL-----FRPKLIIAGAS--AYPR----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----Y 304 (419)
Q Consensus 240 ~d~Le~~l~~-----~~pklIi~~~s--~~p~----~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~----~ 304 (419)
.+.+++.+.+ .++..+|+..- .-+. ..-+++++++|++||+++|+|++| .|+.-.|.. .-++ .
T Consensus 206 ~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQ-tG~GRTG~~-fa~E~~gv~ 283 (447)
T COG0160 206 LEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQ-TGFGRTGKM-FAFEHFGVE 283 (447)
T ss_pred HHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccc-cCCCccccc-hhhhhcCCC
Confidence 3445554432 23567777531 1121 223799999999999999999998 465544432 2233 3
Q ss_pred CcEEEeCCCCcC-CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHH
Q 014724 305 CDVVTTTTHKSL-RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNC 383 (419)
Q Consensus 305 ~Div~~S~hK~l-~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~ 383 (419)
.||+|. +|++ .|...|.+++++ ++.+ .......++.+|-.....+|++ .|+.+.+ +...++..+.-
T Consensus 284 PDivt~--aK~ig~G~Pl~avv~r~------ei~~-~~~g~~~~Tf~GNpva~Aaa~A-vL~vie~---e~L~~~a~~~G 350 (447)
T COG0160 284 PDIVTL--AKSLGGGLPLSAVVGRA------EIMD-WPPGGHGGTFGGNPVACAAALA-VLDVIEE---ENLLERAAELG 350 (447)
T ss_pred CCEEEe--cccccCCCceeEEeccH------Hhcc-cCCcccCCCCCcCHHHHHHHHH-HHHHHHH---ccHHHHHHHHH
Confidence 588875 5998 455678888887 4554 2222233334443333333332 4554543 25567777777
Q ss_pred HHHHHHHHhC
Q 014724 384 RALASRLVEL 393 (419)
Q Consensus 384 ~~l~~~L~~~ 393 (419)
++|.+.|.++
T Consensus 351 ~~l~~~L~~l 360 (447)
T COG0160 351 EYLRDRLEEL 360 (447)
T ss_pred HHHHHHHHHH
Confidence 8888888763
No 329
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=98.98 E-value=9.2e-08 Score=97.97 Aligned_cols=256 Identities=13% Similarity=0.018 Sum_probs=127.7
Q ss_pred CChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHcc--C
Q 014724 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--K 190 (419)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all--~ 190 (419)
+-+|.|.+|+.+.+......++. .. .++ ..+ +..+++.+++.... +....+.+||++|++.++.... .
T Consensus 49 h~~p~v~~a~~~ql~~~~~~~~~---~~-~~~--~~~--~la~~l~~~~p~~~--~~~v~f~~sGseA~e~AlklAr~~t 118 (420)
T TIGR00700 49 HSHPRVVDAVRTQVAEFTHTCFM---VT-PYE--GYV--ALAEKLNRIAPGSG--PKKSVFFNSGAEAVENAVKIARSYT 118 (420)
T ss_pred CCCHHHHHHHHHHHHhccCcccc---cc-CCh--HHH--HHHHHHHHhCCCCC--CCEEEEeCCcHHHHHHHHHHHHHhc
Confidence 34789999988887542111111 01 111 112 23456666653211 1123667899999998875432 2
Q ss_pred CCCEEEEeCCCCCccccCcccccccc--ccccc-----cccEEEecccCCC--------CCCCCHHHHHHHhh----hcC
Q 014724 191 PHDRIMGLDLPHGGHLSHGFMTPKRR--VSGTS-----IYFESMPYRLDES--------TGLVDYDMLEKTAI----LFR 251 (419)
Q Consensus 191 pGD~Vl~~~~~~~g~~s~~~~~~~~~--i~~~g-----~~~~~v~~~~~~~--------~~~iD~d~Le~~l~----~~~ 251 (419)
...+|+...-.|.|.. .+....... ....+ -.+..++++.... ...-+++.+++.+. ..+
T Consensus 119 gr~~ii~~~~~yHG~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (420)
T TIGR00700 119 GRPGVVAFDHGFHGRT-NMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVIDVGANN 197 (420)
T ss_pred CCCcEEEECCCcCCCc-HHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHHHHHhhcCCCc
Confidence 2346877765543331 111000000 00000 0112223221000 00012556777653 124
Q ss_pred CeEEEEcCC--CCC----CcCChHHHHHHHHHhCCEEEEeccccccccccCCcC--CCCC-CCcEEEeCCCCcC-CCCCe
Q 014724 252 PKLIIAGAS--AYP----RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSL-RGPRG 321 (419)
Q Consensus 252 pklIi~~~s--~~p----~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~--~~~~-~~Div~~S~hK~l-~Gprg 321 (419)
..+||+..- +.+ ....+++|+++|++||+++|+|+++ .|+...+... ..++ ..|+++ ++|++ +|++.
T Consensus 198 iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~-tg~gr~g~~~a~~~~~~~pDi~~--lsK~l~~G~pi 274 (420)
T TIGR00700 198 VAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQ-TGFARTGAMFACEHEGPEPDLIT--TAKSLADGLPL 274 (420)
T ss_pred EEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecc-cCCcccchhHHHhhcCCCCCEEE--eeccccCCcce
Confidence 566776531 112 1223899999999999999999995 5654433211 1112 357665 78998 67889
Q ss_pred eEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHh
Q 014724 322 GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE 392 (419)
Q Consensus 322 G~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~ 392 (419)
|++++++ ++.+.+.......+.++.... .++...+++.+.++++ .+++.+..+++.+.|++
T Consensus 275 g~v~~~~------~i~~~~~~~~~~~T~~~~pl~-~aaa~a~l~~l~~~~~---~~~~~~~g~~l~~~L~~ 335 (420)
T TIGR00700 275 SGVTGRA------EIMDAPAPGGLGGTYAGNPLA-CAAALAVLAIIESEGL---IERARQIGRLVTDRLTT 335 (420)
T ss_pred EEEEecH------HHHhhcCCCCcCCCCCcCHHH-HHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHHH
Confidence 9999987 676666433222333333223 3333334555443333 34444445556555554
No 330
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=98.98 E-value=6.3e-08 Score=94.35 Aligned_cols=168 Identities=15% Similarity=0.130 Sum_probs=111.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCceeEecCCh-HHHHHHHHHHcc-CCCCEEEEeCCCCCccccCccccccccccccccc
Q 014724 146 IDELETLCQKRALAAFNLDENKWGVNVQPLSG-SPANFEVYTAIL-KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY 223 (419)
Q Consensus 146 ~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sG-t~A~~~~~~all-~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~ 223 (419)
+.-+++.+.+.+.+.=| .+.+|. +|..|+| +.|+..++..++ .+.|-||++-|-|.-+. ..++..|.
T Consensus 115 v~~vR~~VA~~I~rRDG-~p~~p~-dI~LT~GAS~ai~~il~l~~~~~~~GvliPiPQYPLYs--------Ati~l~~~- 183 (475)
T KOG0258|consen 115 VPGVRKHVAEFIERRDG-IPADPE-DIFLTTGASPAIRSILSLLIAGKKTGVLIPIPQYPLYS--------ATISLLGG- 183 (475)
T ss_pred ChhHHHHHHHHHHhccC-CCCCHH-HeeecCCCcHHHHHHHHHHhcCCCCceEeecCCCchhH--------HHHHHhCC-
Confidence 33455556666777777 545563 4666766 678888887764 58899999988764331 13444444
Q ss_pred cEEEecccCCC-CCCCCHHHHHHHhhh----cCCeEEEEcCCCCCC-----cCChHHHHHHHHHhCCEEEEecccccccc
Q 014724 224 FESMPYRLDES-TGLVDYDMLEKTAIL----FRPKLIIAGASAYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLV 293 (419)
Q Consensus 224 ~~~v~~~~~~~-~~~iD~d~Le~~l~~----~~pklIi~~~s~~p~-----~~dl~~I~~ia~~~ga~livD~ah~~Gl~ 293 (419)
..++|-+|++ +|.+|.++|++.+.+ .+|+++++=+|.||+ ...+++|.++|.+.+++|+.|+.+---+.
T Consensus 184 -~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy 262 (475)
T KOG0258|consen 184 -TQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEGLVLLADEVYQDNVY 262 (475)
T ss_pred -cccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcCeEEechHHHHhhcc
Confidence 4566656654 589999999988765 357777766688886 34689999999999999999998532222
Q ss_pred ccC-CcCCC------CC--CCc----EEEeCCCCcC---CCCCeeEEE
Q 014724 294 AAS-VVADP------FK--YCD----VVTTTTHKSL---RGPRGGMIF 325 (419)
Q Consensus 294 ~~g-~~~~~------~~--~~D----iv~~S~hK~l---~GprgG~i~ 325 (419)
..+ .+.+- +. +.| +...|+||.+ .|.|||++=
T Consensus 263 ~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmE 310 (475)
T KOG0258|consen 263 TTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYME 310 (475)
T ss_pred CCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeee
Confidence 221 11110 11 332 4567788987 578999863
No 331
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=98.96 E-value=5.6e-08 Score=98.22 Aligned_cols=214 Identities=20% Similarity=0.206 Sum_probs=115.6
Q ss_pred HHHHHHHHHcCCCCCCCceeEecCCh-HHHHHHHHHHc---cCCCCEEEEeCCCCCccccCccccccccccccccccEEE
Q 014724 152 LCQKRALAAFNLDENKWGVNVQPLSG-SPANFEVYTAI---LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESM 227 (419)
Q Consensus 152 ~~~~~la~~~g~~~~~~~v~V~~~sG-t~A~~~~~~al---l~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v 227 (419)
+.+..++++.|.+. +|.....| +.+-++++.+. -+..++|+++.-.|+.+... . .-...+.+++++
T Consensus 114 e~Qs~i~eLTGmdv----aNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v-~-----~t~a~~~g~~iv 183 (429)
T PF02347_consen 114 EYQSMICELTGMDV----ANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAV-L-----RTYAAPLGIEIV 183 (429)
T ss_dssp HHHHHHHHHHTSSE----E-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHH-H-----HHHCCHCCEEEE
T ss_pred HHHHHHHHhhCCCc----cCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHH-H-----HHhhhhCCeEEE
Confidence 35788999999986 34444433 33333333333 33456999998777655420 0 001233445666
Q ss_pred ecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC-CCcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC-CC
Q 014724 228 PYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY-PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YC 305 (419)
Q Consensus 228 ~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~-p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~-~~ 305 (419)
.++.+ +++..| ..++..|++.+||+ +...|+++|.+++|++|+++++ .+. ..+-+.+..|-+ |+
T Consensus 184 ~~~~~-~~~~~d---------~~~~a~v~vq~Pn~~G~~ed~~~i~~~~h~~gal~~~-~ad---~~aL~~l~~Pge~GA 249 (429)
T PF02347_consen 184 EVPLD-EDGTTD---------DDDTAAVMVQNPNTFGVFEDIKEIADIAHAAGALVIV-GAD---PNALGGLKSPGEYGA 249 (429)
T ss_dssp EE-BB-TTCSB----------STTEEEEEEESS-TTSB--THHHHHHHHHHTT-EEEE-CGG---CCGCCTC--GGGGT-
T ss_pred Eeccc-ccCCcc---------ccCeEEEEeecCCCCceEeeHHHHHHHHHHcCCEEEE-ecC---HHHHhCcCChhhcCc
Confidence 66655 345555 34678888888875 5677899999999999999987 543 222223334444 89
Q ss_pred cEEEeCCCCcC------CCCCeeEEEEeCCCc---c-------------------hhhHHHHhhhcc-cCCCCCCChHHH
Q 014724 306 DVVTTTTHKSL------RGPRGGMIFFKKDPV---L-------------------GVELESAINNAV-FPGLQGGPHNHT 356 (419)
Q Consensus 306 Div~~S~hK~l------~GprgG~i~~~~~~~---~-------------------~~~l~~~i~~~~-~~~~~g~p~~~~ 356 (419)
||+++. ||+| +||..|++.++++.+ + +..-.+.|+.-. ...+. + +..
T Consensus 250 DI~vg~-~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIc-t--nqa 325 (429)
T PF02347_consen 250 DIVVGE-HQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNIC-T--NQA 325 (429)
T ss_dssp SEEEEC-CTTTT---CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT----S--S-H
T ss_pred cEEeeC-CCCCcccCCCCCCCeeeEEEhhhhhhhCCCceecccccccccceeeeccccccccccccchhhhhh-h--hHH
Confidence 999776 8876 567779999988511 0 011112232211 11111 1 112
Q ss_pred HHHHHH--HHHHhcChHHHHHHHHHHHHHHHHHHHHHhC
Q 014724 357 IGGLAV--CLKHAQSPEFKVYQNKVVSNCRALASRLVEL 393 (419)
Q Consensus 357 iaala~--al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~ 393 (419)
+.|+.+ -+..+..+++++..++...++.++++.|.+.
T Consensus 326 L~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~ 364 (429)
T PF02347_consen 326 LLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKI 364 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 222221 1233334577999999999999999999996
No 332
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=98.96 E-value=1.3e-07 Score=97.47 Aligned_cols=249 Identities=16% Similarity=0.069 Sum_probs=129.0
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHcc-CC-
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL-KP- 191 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all-~p- 191 (419)
-+|.|.+|+.+.+.. .. +....++ .++.. .++.+++++++.....+ ...+.+||++|++.++.... -.
T Consensus 59 ~~p~v~~Ai~~ql~~-~~--~~~~~~~-~~~~~----~~lae~L~~~~p~~~~~--~v~f~~SGseA~e~AiklAr~~tg 128 (445)
T PRK08593 59 APPRVVEAIKAQADK-FI--HYTPAYM-YHEPL----VRLAKKLCELAPGDFEK--RVTFGLSGSDANDGIIKFARAYTG 128 (445)
T ss_pred CCHHHHHHHHHHHHh-cc--Ccccccc-CCHHH----HHHHHHHHHhCCCCCCC--EEEECCchHHHHHHHHHHHHHhhC
Confidence 479999998888753 21 1111111 12211 22346677776432101 22455789999998886431 12
Q ss_pred CCEEEEeCCCCCccccCccccccccccccc-------------cccEEEecccCCC--CCCCC-------HHHHHHHhhh
Q 014724 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTS-------------IYFESMPYRLDES--TGLVD-------YDMLEKTAIL 249 (419)
Q Consensus 192 GD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g-------------~~~~~v~~~~~~~--~~~iD-------~d~Le~~l~~ 249 (419)
..+|+..+-.|.|.. .+. ++.++ .++..++++-... ....+ ++++++.+..
T Consensus 129 r~~ii~~~~~YHG~t-~~a------ls~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (445)
T PRK08593 129 RPYIISFTNAYHGST-YGS------LSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEK 201 (445)
T ss_pred CCeEEEECCCcCCCc-HHH------HhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHh
Confidence 346777765543331 111 11111 0122233221000 00111 2445554432
Q ss_pred ----cCCeEEEEcCCC--CCCcC----ChHHHHHHHHHhCCEEEEeccccccccccCCcC--CCCC-CCcEEEeCCCCcC
Q 014724 250 ----FRPKLIIAGASA--YPRDF----DYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSL 316 (419)
Q Consensus 250 ----~~pklIi~~~s~--~p~~~----dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~--~~~~-~~Div~~S~hK~l 316 (419)
.+..+||+.... .+... -+++|+++|++||+++|+||+|. |+...|... ..+. ..|++ ++.|.+
T Consensus 202 ~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~t-g~GrtG~~~a~~~~gv~pDi~--t~gK~l 278 (445)
T PRK08593 202 YLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQ-GLGRTGKWSSISHFNITPDLM--SFGKSL 278 (445)
T ss_pred hcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCcCchHHHHHhcCCCCCEe--eecccc
Confidence 345677776421 12222 28999999999999999999973 432222110 1111 35766 468998
Q ss_pred C-CCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHh
Q 014724 317 R-GPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE 392 (419)
Q Consensus 317 ~-GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~ 392 (419)
+ |.++|++++++ ++.+.+......++.+++ ....++...+++.+.++ ...+++.++.++|.+.|++
T Consensus 279 ~~G~p~gav~~~~------~i~~~~~~~~~~~T~~~~-pl~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~ 345 (445)
T PRK08593 279 AGGMPMSAIVGRK------EIMESLEAPAHLFTTGAN-PVSCAAALATIDMIEDE---SLLQRSAEKGEYARKRFDQ 345 (445)
T ss_pred cCCcccEEEEEcH------HHHhhhccCCCCCCCCCC-HHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHH
Confidence 4 56788898887 676666432222233332 23333333456655432 4566677777778887765
No 333
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=98.96 E-value=2.5e-07 Score=95.88 Aligned_cols=245 Identities=17% Similarity=0.118 Sum_probs=129.5
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHcc--CC
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--KP 191 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all--~p 191 (419)
-+|.|.+++.+.+......+. .+ +.+.+..+++.+.+.. .+ . + .+.+||++|++.++.... ..
T Consensus 116 ~~p~v~~av~~ql~~~~~~~~-------~~----~~~~~lAe~l~~~~p~-~~-~-v-~f~~SGsEA~e~AlklAR~~tg 180 (474)
T PLN02482 116 ADDEVLAALAETMKKGTSFGA-------PC----LLENVLAEMVIDAVPS-VE-M-V-RFVNSGTEACMGVLRLARAYTG 180 (474)
T ss_pred CCHHHHHHHHHHHhhCCCCCC-------CC----HHHHHHHHHHHHhCCC-CC-E-E-EEeCChHHHHHHHHHHHHHhcC
Confidence 379999999988864321111 11 2222344667776632 11 1 2 567889999998886442 22
Q ss_pred CCEEEEeCCCCCcccc-Cccccc--cccc---ccccccc----EEEecccCCCCCCCCHHHHHHHhhhc--CCeEEEEcC
Q 014724 192 HDRIMGLDLPHGGHLS-HGFMTP--KRRV---SGTSIYF----ESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAGA 259 (419)
Q Consensus 192 GD~Vl~~~~~~~g~~s-~~~~~~--~~~i---~~~g~~~----~~v~~~~~~~~~~iD~d~Le~~l~~~--~pklIi~~~ 259 (419)
.++|+...-.|.|+.. .+.... .... ...+... ..+.++ ..|++.+++.+.++ +..+||+..
T Consensus 181 r~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~------~nd~~~l~~~l~~~~~~iAavI~Ep 254 (474)
T PLN02482 181 REKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAP------YNDLEAVKKLFEANKGEIAAVILEP 254 (474)
T ss_pred CCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEec------CCChHHHHHHHHhCCCceEEEEECC
Confidence 3578877655444210 000000 0000 0000000 011111 13789999988643 345666653
Q ss_pred C--CCCCc----CChHHHHHHHHHhCCEEEEeccccccccccCCc--CCCCC-CCcEEEeCCCCcCC-CCCeeEEEEeCC
Q 014724 260 S--AYPRD----FDYPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTTTHKSLR-GPRGGMIFFKKD 329 (419)
Q Consensus 260 s--~~p~~----~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~--~~~~~-~~Div~~S~hK~l~-GprgG~i~~~~~ 329 (419)
- +.+.. .-+++|+++|++||+++|+|++| .|+. .+.. ...+. ..|++ ++.|.++ |...|.+++++
T Consensus 255 v~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~-tGfR-~g~~ga~~~~gv~PDi~--t~gK~lggG~Pigav~g~~- 329 (474)
T PLN02482 255 VVGNSGFIVPKKEFLEGLREITKENGALLVFDEVM-TGFR-IAYGGAQEYFGITPDLT--TLGKVIGGGLPVGAYGGRR- 329 (474)
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccc-cCee-cCcchHhHHhCCCCCEE--EecchhhCCCceEEEEEcH-
Confidence 2 11211 22679999999999999999998 5752 2210 01112 35775 4589995 44455557776
Q ss_pred CcchhhHHHHhhhc--c-cCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC
Q 014724 330 PVLGVELESAINNA--V-FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL 393 (419)
Q Consensus 330 ~~~~~~l~~~i~~~--~-~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~ 393 (419)
++.+.+... . ..++.++ ++...++...+|+.+.++ ...+++.++.++|.+.|++.
T Consensus 330 -----ei~~~~~~~~~~~~~~T~~g-npl~~aAala~L~~l~~~---~~~~~~~~~g~~l~~~L~~l 387 (474)
T PLN02482 330 -----EIMEMVAPAGPMYQAGTLSG-NPLAMTAGIHTLKRLQQP---GTYEYLDKITKKLIQGILEA 387 (474)
T ss_pred -----HHHHhhccCCCcccccCcch-hHHHHHHHHHHHHHHhcc---CHHHHHHHHHHHHHHHHHHH
Confidence 676666421 1 1112222 222333333356666433 34666777778888888664
No 334
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=98.95 E-value=1.1e-07 Score=97.51 Aligned_cols=251 Identities=14% Similarity=0.061 Sum_probs=135.6
Q ss_pred CChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccC--
Q 014724 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK-- 190 (419)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~-- 190 (419)
.-+|+|.+++.+.+.. +...... .+.... .++ +.++++++++-..+ ...+..||++|+..++.....
T Consensus 61 h~~p~v~~ai~~~~~~-~~~~~~~--~~~~~~---~~~--la~~l~~~~~~~~~---~v~f~~sGseA~e~AlklAr~~~ 129 (427)
T TIGR00508 61 YNHPRLNAAAQKQIDK-MSHVMFG--GFTHKP---AIE--LCQKLVKMTPNALD---CVFLADSGSVAVEVALKMALQYW 129 (427)
T ss_pred CCCHHHHHHHHHHHHh-cCCcccc--ccCCHH---HHH--HHHHHHhhCCCCCC---EEEEeCCcHHHHHHHHHHHHHHH
Confidence 3578999998887743 3211111 011111 222 33566677643322 235667899999988764421
Q ss_pred -----CC-CEEEEeCCCCCccccCcccccccccccccc-------------ccEEEecccCCCC---CCCCHHHHHHHhh
Q 014724 191 -----PH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-------------YFESMPYRLDEST---GLVDYDMLEKTAI 248 (419)
Q Consensus 191 -----pG-D~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~-------------~~~~v~~~~~~~~---~~iD~d~Le~~l~ 248 (419)
+| .+|+...-.|.|... +. ....+. ....++++..... ..-|++++++++.
T Consensus 130 ~~~~~~~r~~il~~~~~yHG~t~-~~------~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l~ 202 (427)
T TIGR00508 130 QAKGEKNRQKFLTIRSGYHGDTF-GA------MSVCDPENSMHSLYKGYLPEQIFAPAPQNRFDEEWNEEAITPLAKLME 202 (427)
T ss_pred HhhCCCCccEEEEEcCCcCCccH-hh------hcccCCcccccccccccCCCCeEcCCCCccccchhHHHHHHHHHHHHH
Confidence 22 578888766544321 10 111110 0111121111000 0125677888876
Q ss_pred hc--CCeEEEEcC--CCCC-----CcCChHHHHHHHHHhCCEEEEeccccccccccCCc--CCCCC-CCcEEEeCCCCcC
Q 014724 249 LF--RPKLIIAGA--SAYP-----RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTTTHKSL 316 (419)
Q Consensus 249 ~~--~pklIi~~~--s~~p-----~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~--~~~~~-~~Div~~S~hK~l 316 (419)
+. +..+|++.. +..+ ...++++|+++|++||+++|+|++| .|+...|.. ...++ ..|+++ +.|+|
T Consensus 203 ~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~-tG~Gr~G~~~~~~~~~v~pDi~~--~gK~l 279 (427)
T TIGR00508 203 LHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIA-TGFGRTGKLFACEHAGVVPDILC--VGKAL 279 (427)
T ss_pred hcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccc-cCCCcCCccchhhhcCCCCCEEE--echhh
Confidence 43 345677664 2222 2356899999999999999999998 565333321 11122 468776 68998
Q ss_pred C-C-CCeeEEEEeCCCcchhhHHHHhhhcc-----cCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHH
Q 014724 317 R-G-PRGGMIFFKKDPVLGVELESAINNAV-----FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASR 389 (419)
Q Consensus 317 ~-G-prgG~i~~~~~~~~~~~l~~~i~~~~-----~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~ 389 (419)
. | ...+.++.++ ++.+.+.... ...+.++ ++...++...+++.+.++ .+.+++.++.++|.+.
T Consensus 280 ~gG~~p~~a~~~~~------~~~~~~~~~~~~~~~~~~T~~g-~p~~~aaa~a~l~~l~~~---~~~~~~~~~~~~l~~~ 349 (427)
T TIGR00508 280 TGGYMTLSATVTTD------KVAQTISSGEAGCFMHGPTFMG-NPLACAVAEASLAILLEG---EWQKQVSAIENQLKRE 349 (427)
T ss_pred hcCcccceEEEEcH------HHHHHHhcCCCCccccCCCCCc-CHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHH
Confidence 4 3 2456666666 5666664321 1122222 223333333456655432 3467788888999999
Q ss_pred HHhCC
Q 014724 390 LVELG 394 (419)
Q Consensus 390 L~~~G 394 (419)
|++++
T Consensus 350 L~~l~ 354 (427)
T TIGR00508 350 LSPLR 354 (427)
T ss_pred HHHhh
Confidence 98764
No 335
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=98.95 E-value=2.9e-07 Score=94.84 Aligned_cols=251 Identities=20% Similarity=0.134 Sum_probs=130.2
Q ss_pred CChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccC--
Q 014724 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK-- 190 (419)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~-- 190 (419)
.-+|.|.+|+.+.+.+ ...... +...++. +.+..+++.+++....+ ...+.+||++|++.++.....
T Consensus 62 h~~p~v~~ai~~ql~~-l~~~~~---~~~~~~~----~~~la~~l~~~~p~~~~---~v~f~~sGseA~e~AlklAr~~~ 130 (442)
T PRK13360 62 HGRPEIVEAVRAQAGE-LDYAPA---FQMGHPK----AFELANRIAEIAPGGLN---HVFFTNSGSESVDTALKIALAYH 130 (442)
T ss_pred CCCHHHHHHHHHHHHh-CCCccc---CCcCCHH----HHHHHHHHHHhCCCCCC---EEEEeCCcHHHHHHHHHHHHHHH
Confidence 3578899998887753 211111 1111221 12244667777632221 225678899999988764321
Q ss_pred -----C-CCEEEEeCCCCCccccCccccccccccccc------------cccEEEecccCCCC--CC--------CCHHH
Q 014724 191 -----P-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTS------------IYFESMPYRLDEST--GL--------VDYDM 242 (419)
Q Consensus 191 -----p-GD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g------------~~~~~v~~~~~~~~--~~--------iD~d~ 242 (419)
+ ..+|+...-.|.|.. .+ .++..| ..+..++++.+... +. -+.++
T Consensus 131 ~~~g~~~r~~ii~~~~~yHG~t-~g------als~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 203 (442)
T PRK13360 131 RARGEGSRTRLIGRERGYHGVG-FG------GISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADE 203 (442)
T ss_pred HhcCCCCCcEEEEEcCCcCCcc-Hh------hhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHHHHHHHH
Confidence 2 357888876544431 11 011111 01122332211000 00 02467
Q ss_pred HHHHhhhc---CCeEEEEcCC--CCCCcCC----hHHHHHHHHHhCCEEEEeccc-cccccccCCcCCCCC-CCcEEEeC
Q 014724 243 LEKTAILF---RPKLIIAGAS--AYPRDFD----YPRMRQIADAVGALLMMDMAH-ISGLVAASVVADPFK-YCDVVTTT 311 (419)
Q Consensus 243 Le~~l~~~---~pklIi~~~s--~~p~~~d----l~~I~~ia~~~ga~livD~ah-~~Gl~~~g~~~~~~~-~~Div~~S 311 (419)
+|+++... ++.+|++..- ..+...+ +++|+++|++||+++|+|++| .+|-.+......-++ ..|++ +
T Consensus 204 le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv--t 281 (442)
T PRK13360 204 LERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGVTPDLL--T 281 (442)
T ss_pred HHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCcee--e
Confidence 88877532 3456666531 1222334 899999999999999999998 333332211001111 35776 5
Q ss_pred CCCcCC-C-CCeeEEEEeCCCcchhhHHHHhhhc-------ccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHH
Q 014724 312 THKSLR-G-PRGGMIFFKKDPVLGVELESAINNA-------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN 382 (419)
Q Consensus 312 ~hK~l~-G-prgG~i~~~~~~~~~~~l~~~i~~~-------~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n 382 (419)
+.|.+. | .+.|.+++++ ++.+.+... ....+.++ ++...++...+|+.+.++ .+.++..++
T Consensus 282 ~gK~l~gG~~P~gav~~~~------~i~~~~~~~~~~~~~~~~~~T~~g-~pl~~aaa~a~L~~l~~~---~l~~~~~~~ 351 (442)
T PRK13360 282 CAKGLTNGAIPMGAVFVSS------EIHDAFMQGPEAGIEFFHGYTYSG-HPLACAAALATLDLYERE---GLLTRAARL 351 (442)
T ss_pred eeeccccCccceEEEEEcH------HHHHHhhcCCccccccccCCCCCC-CHHHHHHHHHHHHHHHhC---CHHHHHHHH
Confidence 689995 3 2345566665 555544321 11223333 333344444466666433 356677777
Q ss_pred HHHHHHHHHhC
Q 014724 383 CRALASRLVEL 393 (419)
Q Consensus 383 ~~~l~~~L~~~ 393 (419)
.++|.+.|+++
T Consensus 352 g~~l~~~l~~l 362 (442)
T PRK13360 352 APYWEDALHSL 362 (442)
T ss_pred HHHHHHHHHHh
Confidence 88888888764
No 336
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=98.95 E-value=7.4e-08 Score=96.67 Aligned_cols=188 Identities=19% Similarity=0.176 Sum_probs=109.3
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHc-cCCC
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPH 192 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~al-l~pG 192 (419)
-+|+|.+|+.+.+.+-.. .+..+. ++...++ .++++++++.+. + +..+||++|+++++... ..+|
T Consensus 41 ~~p~v~~ai~~ql~~~~~---~~~~~~--~~~~~~l----a~~l~~~~~~~~----v-~~~~SGseA~e~Alklar~~~g 106 (364)
T PRK04013 41 NHPEWVEEMSEQLEKLVV---AGPMFE--HEEKEEM----LEELSKWVNYEY----V-YMGNSGTEAVEAALKFARLYTG 106 (364)
T ss_pred CCHHHHHHHHHHHHhcCC---ccCCcC--CHHHHHH----HHHHHhhcCCCE----E-EEeCchHHHHHHHHHHHHHHhC
Confidence 478999999888764321 111121 2222233 366777776543 2 67789999999888755 3355
Q ss_pred -CEEEEeCCCCCccccCcccccccccccccc-----ccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC--C-
Q 014724 193 -DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-----YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY--P- 263 (419)
Q Consensus 193 -D~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~-----~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~--p- 263 (419)
++|++.+..|.|... +. +...+. .+.....++... ...|.+.+++.+.+ ++++|++..... +
T Consensus 107 r~~Ii~~~~syHG~t~-~~------ls~~~~~~~~~~~~p~~~~~~~~-~~~d~~~l~~~i~~-~~aAvivEpi~g~gG~ 177 (364)
T PRK04013 107 RKEIIAMTNAFHGRTM-GA------LSATWKPKYREDFEPLVPGFKHI-PFNDVEAAKEAITK-ETAAVIFEPIQGEGGI 177 (364)
T ss_pred CCEEEEECCccccCch-hh------ccCCCCcccccCCCCCCCCcEEe-cCCCHHHHHHHhcC-CcEEEEEcCCcCCCCC
Confidence 899988766544321 11 111110 011100001000 12378889988864 788888764221 1
Q ss_pred CcCC---hHHHHHHHHHhCCEEEEeccccccccccCCcC--CCCC-CCcEEEeCCCCcCC-CCCeeEEEEeC
Q 014724 264 RDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLR-GPRGGMIFFKK 328 (419)
Q Consensus 264 ~~~d---l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~--~~~~-~~Div~~S~hK~l~-GprgG~i~~~~ 328 (419)
...| +++|+++|++||+++|.|+++. |+ ..|..- ..+. ..|+++. .|.++ |.+.|.++.+.
T Consensus 178 ~~~~~~yl~~lr~lc~~~gillI~DEv~t-G~-RtG~~~a~~~~gv~PDiv~~--gK~lggG~P~~a~~~~~ 245 (364)
T PRK04013 178 VPAKEEFVKTLRDLTEDVGALLIADEVQS-GL-RTGKFLAIEHYKVEPDIVTM--GKGIGNGVPVSLTLTNF 245 (364)
T ss_pred cCCCHHHHHHHHHHHHHcCCEEEEechhh-cC-CCCchhHHHhcCCCCCEEEe--cccccCCceeEEEEecc
Confidence 2234 8999999999999999999974 65 333211 1122 4688775 79984 44556666665
No 337
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=98.95 E-value=1e-07 Score=97.79 Aligned_cols=255 Identities=16% Similarity=0.113 Sum_probs=125.5
Q ss_pred ChHHHHHHHhhhhhcc-CCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCc-eeEec-CChHHHHHHHHHHcc-
Q 014724 114 TSRAVMEAVGSCLTNK-YSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWG-VNVQP-LSGSPANFEVYTAIL- 189 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~-y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~-v~V~~-~sGt~A~~~~~~all- 189 (419)
-+|.|.+|+.+.+... +..+. .+ .++ ... ...+++.+.+..+. .+. ..+++ +||++|++.++....
T Consensus 56 ~~p~v~~ai~~ql~~~~~~~~~----~~-~~~---~~~-~lae~l~~~~~~~~-~~~~~~~f~~~sGseA~e~AlklAr~ 125 (425)
T PRK09264 56 NNPVLKQALIDYLQRDGITHGL----DM-HTT---AKR-EFLETFEETILKPR-GLDYKVQFTGPTGTNAVEAALKLARK 125 (425)
T ss_pred CCHHHHHHHHHHHHhccccccc----cc-CcH---HHH-HHHHHHHHhhcCCc-CCCceEEEeCCCHHHHHHHHHHHHHH
Confidence 4789999998877531 11110 11 112 111 22355555542211 010 11343 699999998885442
Q ss_pred -CCCCEEEEeCCCCCccccCcccccc-cc-cc-ccc---cccEEEecccCCCCCCCCHHHHHHHhhhc-----CCeEEEE
Q 014724 190 -KPHDRIMGLDLPHGGHLSHGFMTPK-RR-VS-GTS---IYFESMPYRLDESTGLVDYDMLEKTAILF-----RPKLIIA 257 (419)
Q Consensus 190 -~pGD~Vl~~~~~~~g~~s~~~~~~~-~~-i~-~~g---~~~~~v~~~~~~~~~~iD~d~Le~~l~~~-----~pklIi~ 257 (419)
....+|+...-.|.|.. .+..... .. .. ..+ ..+..++++.......-|++++++.+++. +..+||+
T Consensus 126 ~tgr~~ii~~~~~yHG~t-~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~~aavi~ 204 (425)
T PRK09264 126 VTGRTNIVAFTNGFHGMT-LGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSSGVDLPAAVIV 204 (425)
T ss_pred hcCCCeEEEECCccCCcc-HHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccCCCCceEEEEE
Confidence 22357887765543331 1100000 00 00 000 01223333210000013778888888642 3456766
Q ss_pred cCC--CCC----CcCChHHHHHHHHHhCCEEEEeccccccccccCCcC--CCCC-CCcEEEeCCCCcCC--CCCeeEEEE
Q 014724 258 GAS--AYP----RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLR--GPRGGMIFF 326 (419)
Q Consensus 258 ~~s--~~p----~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~--~~~~-~~Div~~S~hK~l~--GprgG~i~~ 326 (419)
..- ..+ ....+++|+++|++||+++|+|++|. |+...|... ..+. ..|+++. +|+++ |.+.|++++
T Consensus 205 Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t-G~GrtG~~~~~~~~~v~PDi~t~--~K~l~~~G~pigav~~ 281 (425)
T PRK09264 205 ETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQA-GCGRTGTFFSFERAGITPDIVTL--SKSISGYGLPMALVLI 281 (425)
T ss_pred ecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhh-CCccccHHHHHhhcCCCCCEEEe--ccccCCCccceEEEEE
Confidence 531 112 22358999999999999999999974 543222110 1111 4577655 69984 556788888
Q ss_pred eCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHh
Q 014724 327 KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE 392 (419)
Q Consensus 327 ~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~ 392 (419)
++ ++. .+.......+.++ ++...++...++.+...+ ..+.+++.++.++|.+.|++
T Consensus 282 ~~------~i~-~~~~~~~~~T~~g-np~~~aaa~a~l~~~~~~--~~l~~~~~~~g~~l~~~l~~ 337 (425)
T PRK09264 282 KP------ELD-VWKPGEHNGTFRG-NNLAFVTATAALEEYWSD--DAFEKEVKAKGELVRERLEE 337 (425)
T ss_pred ch------hhh-ccCCCccCCCCCC-CHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHHH
Confidence 86 442 2222112222222 222223322345333211 24566677777888877765
No 338
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=98.94 E-value=1.6e-08 Score=103.55 Aligned_cols=239 Identities=22% Similarity=0.254 Sum_probs=148.2
Q ss_pred HHHHHHHHcCCCCCCCceeEecCChHHHH---HHHHHHcc-CCCC----EEEEeCCCCCccccCcccccccccccccccc
Q 014724 153 CQKRALAAFNLDENKWGVNVQPLSGSPAN---FEVYTAIL-KPHD----RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYF 224 (419)
Q Consensus 153 ~~~~la~~~g~~~~~~~v~V~~~sGt~A~---~~~~~all-~pGD----~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~ 224 (419)
..+++.++.|.|. +.++++||.++- ..++.+.+ .+|+ ..+++...||.+.. .+.+.| .
T Consensus 587 Le~~Lc~iTG~D~----~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPA--------SA~Mag--m 652 (1001)
T KOG2040|consen 587 LEKDLCEITGFDS----FSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPA--------SAAMAG--M 652 (1001)
T ss_pred HHHHhheeecccc----eeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChh--------hHHhcC--C
Confidence 4478999999987 468999997643 44555553 3443 34666666666542 223445 4
Q ss_pred EEEecccCCCCCCCCHHHHHHHhhhcCC--eEEEEcCCC-CC-CcCChHHHHHHHHHhCCEEEEeccccccccccCCcCC
Q 014724 225 ESMPYRLDESTGLVDYDMLEKTAILFRP--KLIIAGASA-YP-RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD 300 (419)
Q Consensus 225 ~~v~~~~~~~~~~iD~d~Le~~l~~~~p--klIi~~~s~-~p-~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~ 300 (419)
++++++++ .+|.||+.+|+++.++++- ..+.+.+|+ ++ ...++++++++.++||--++.|.|....-++ +..
T Consensus 653 kvvpV~~~-~~G~id~~dLk~kaekh~~~Laa~MvTYPST~GvfE~~i~d~cd~iHehGGQVYlDGANMNAqVG---lc~ 728 (1001)
T KOG2040|consen 653 KVVPVGCD-ANGNIDMVDLKAKAEKHKDNLAALMVTYPSTHGVFEEGIDDICDIIHEHGGQVYLDGANMNAQVG---LCR 728 (1001)
T ss_pred EEEEeecc-CCCCccHHHHHHHHHHhhhhhheeEEecccccccccccHHHHHHHHHhcCCEEEecCCCccceec---ccC
Confidence 67777776 4789999999999887643 345555554 44 4567999999999999999999985432221 113
Q ss_pred CCC-CCcEEEeCCCCcCCCC------CeeEEEEeCCCcchhhHHHHhhh--cccC----------CCCCCChH-HHHHHH
Q 014724 301 PFK-YCDVVTTTTHKSLRGP------RGGMIFFKKDPVLGVELESAINN--AVFP----------GLQGGPHN-HTIGGL 360 (419)
Q Consensus 301 ~~~-~~Div~~S~hK~l~Gp------rgG~i~~~~~~~~~~~l~~~i~~--~~~~----------~~~g~p~~-~~iaal 360 (419)
|-+ |+|+.--.+||+|.-| ..|-|..++ .+...+.. .+.+ .....|.- ..+..+
T Consensus 729 pGd~GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK~------HLapfLP~HpVvs~~~~~~~~~~gsVsaaP~Gsa~ILpI 802 (1001)
T KOG2040|consen 729 PGDIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK------HLAPFLPSHPVVSPGRPEDTSPVGSVSAAPWGSALILPI 802 (1001)
T ss_pred CccccccceeecccceeeecCCCCCCCCCccchhh------hccccCCCCCccCCCCCCCCCCccceeccCCCcceeehh
Confidence 333 8999999999998433 335454444 12211110 0100 00111111 123344
Q ss_pred HHHH-HHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEe-c--CCCcceeEEEEeCCccc
Q 014724 361 AVCL-KHAQSPEFKVYQNKVVSNCRALASRLVELGYKLV-S--GGSDNHLVLVDLRPMVT 416 (419)
Q Consensus 361 a~al-~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~-~--~~t~~hlv~vd~~~~~~ 416 (419)
..+. +.+...+++.-.+--.-|+.|++++|+.. ++++ . .+.-.|-+++|+|++..
T Consensus 803 SwaYikmMG~~GL~~as~~AiLNaNYMakRLe~h-Ykil~~~~~~~vaHEFIlD~r~fK~ 861 (1001)
T KOG2040|consen 803 SWAYIKMMGSGGLKDASKIAILNANYMAKRLESH-YKILFRGENGLVAHEFILDLRPFKK 861 (1001)
T ss_pred HHHHHHHhcccccchhhHHHhhhhHHHHHHHhhc-cceeEecCCcceeeeeeeechhhcc
Confidence 4443 33434455555566678899999999886 4433 2 34677889999998753
No 339
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=98.93 E-value=3.1e-07 Score=94.43 Aligned_cols=239 Identities=17% Similarity=0.141 Sum_probs=126.3
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHcc-CCC
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL-KPH 192 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all-~pG 192 (419)
-+|.|.+|+.+.+..... +. . .. ..+.+..+++.+++.... ...+.+||++|++.++.... -.|
T Consensus 65 ~~p~v~~Ai~~q~~~~~~--~~-----~--~~--~~~~~la~~l~~~~p~~~----~v~f~~sGseA~e~AlklAr~~tg 129 (431)
T PRK06209 65 AYPPVVEAVREALQDGCN--FT-----R--PS--AIELDAAESFLELIDGAD----MVKFCKNGSDATSAAVRLARAYTG 129 (431)
T ss_pred CCHHHHHHHHHHHHhCcC--CC-----C--CC--HHHHHHHHHHHHhCCccc----eEEEecCHHHHHHHHHHHHHHHhC
Confidence 478999998888764221 11 1 11 122223466777763211 12567889999998886432 233
Q ss_pred -CEEEEeC-CC-CCcc-ccCccccccccccccccc--c--EEEecccCCCCCCCCHHHHHHHhhhc--CCeEEEEcCCCC
Q 014724 193 -DRIMGLD-LP-HGGH-LSHGFMTPKRRVSGTSIY--F--ESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAGASAY 262 (419)
Q Consensus 193 -D~Vl~~~-~~-~~g~-~s~~~~~~~~~i~~~g~~--~--~~v~~~~~~~~~~iD~d~Le~~l~~~--~pklIi~~~s~~ 262 (419)
.+|+... -. |+.+ ..|+. ... ..+.. . ....++ ..|++++++.+++. +..+|++.. ..
T Consensus 130 r~~i~~~~~~~~h~~~~~~~g~----~~~-~~~~~~~~~~~~~~~~------~~d~~~l~~~l~~~~~~~aavi~Ep-v~ 197 (431)
T PRK06209 130 RDLVARCADHPFFSTDDWFIGT----TPM-SAGIPASVSALTVTFR------YNDIASLEALFEDHPGRIACVILEP-AT 197 (431)
T ss_pred CCeEEEeccCcccccccccccc----CCC-CCCCChhHhccccccC------CCCHHHHHHHHHhCCCCEEEEEEcc-cc
Confidence 3555541 11 1100 00111 000 01100 0 011111 24789999988643 345666653 33
Q ss_pred C---CcCChHHHHHHHHHhCCEEEEeccccccccccC-CcCCCCC-CCcEEEeCCCCcCC-CCCeeEEEEeCCCcchhhH
Q 014724 263 P---RDFDYPRMRQIADAVGALLMMDMAHISGLVAAS-VVADPFK-YCDVVTTTTHKSLR-GPRGGMIFFKKDPVLGVEL 336 (419)
Q Consensus 263 p---~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g-~~~~~~~-~~Div~~S~hK~l~-GprgG~i~~~~~~~~~~~l 336 (419)
+ ....+++|+++|++||+++|+|++| .|+...+ .....+. ..|++ ++.|.++ |..+|++++++ ++
T Consensus 198 g~~~~~~~l~~l~~lc~~~g~lLI~DEv~-tG~~~~~~g~~~~~gv~PDi~--t~gK~lggG~p~~av~~~~------~i 268 (431)
T PRK06209 198 ADEPQDGFLHEVRRLCHENGALFILDEMI-TGFRWHMRGAQKLYGIVPDLS--CFGKALGNGFAVSALAGKR------EY 268 (431)
T ss_pred CCCCCHHHHHHHHHHHHHcCCEEEEEccc-ccCCcCcchhhHHhCCCccee--eehhhhcCCcccEEEEEHH------HH
Confidence 3 2335899999999999999999998 6763221 0111111 35764 4689995 45678888877 55
Q ss_pred HHH--hhh----cc--cCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHh
Q 014724 337 ESA--INN----AV--FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE 392 (419)
Q Consensus 337 ~~~--i~~----~~--~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~ 392 (419)
.+. +.. .. +..+. ++++..+++...+++.+.+++ ..+++.++.++|.+.|++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~T~-~~np~~~aaa~a~l~~i~~~~---~~~~~~~~g~~l~~~L~~ 328 (431)
T PRK06209 269 MELGGLEHTDRERVFLLSTTH-GAETHALAAAIATMAIYRDED---VIERLHEQGAKLAAGVNE 328 (431)
T ss_pred HhhhcccccCCCCceeeccCC-CCCHHHHHHHHHHHHHHhccC---HHHHHHHHHHHHHHHHHH
Confidence 554 211 11 11111 233344555445677665433 455666666777776654
No 340
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=98.93 E-value=1.9e-07 Score=95.71 Aligned_cols=249 Identities=17% Similarity=0.068 Sum_probs=132.1
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHcc----
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all---- 189 (419)
-+|.|.+|+.+.+.+- ...... .+ .++. . ....+++.+++....+ ...+.+||++|++.++....
T Consensus 60 ~~p~i~~Ai~~q~~~~-~~~~~~--~~-~~~~---~-~~la~~L~~~~p~~~~---~v~f~~SGsEAve~AlklAr~~~~ 128 (428)
T PRK07986 60 NHPQLNAAMKSQIDAM-SHVMFG--GI-THPP---A-IELCRKLVAMTPQPLE---CVFLADSGSVAVEVAMKMALQYWQ 128 (428)
T ss_pred CCHHHHHHHHHHHhhc-CCcccc--cc-CCHH---H-HHHHHHHHhhCCCCcC---EEEEeCCcHHHHHHHHHHHHHHHH
Confidence 4689999998877532 111110 01 1121 1 1234667776643222 23566789999998886442
Q ss_pred ---CCCCEEEEeCCCCCccccCcccccccccccccc-------------ccEEEecccCCC--CC-CCCHHHHHHHhhhc
Q 014724 190 ---KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-------------YFESMPYRLDES--TG-LVDYDMLEKTAILF 250 (419)
Q Consensus 190 ---~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~-------------~~~~v~~~~~~~--~~-~iD~d~Le~~l~~~ 250 (419)
....+|+...-.|.|.. .+. +...+. .+..++++.... .. .-|++++++.++..
T Consensus 129 ~~g~~r~kii~~~~~yHG~t-~~a------~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~ 201 (428)
T PRK07986 129 AKGEPRQRFLTLRHGYHGDT-FGA------MSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAAH 201 (428)
T ss_pred hcCCCCcEEEEECCCcCCCc-Hhh------hcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHhC
Confidence 22467888876654421 111 111110 011122211000 00 23677888888542
Q ss_pred --CCeEEEEcC--CCCC-C----cCChHHHHHHHHHhCCEEEEeccccccccccCCcC--CCCC-CCcEEEeCCCCcCC-
Q 014724 251 --RPKLIIAGA--SAYP-R----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLR- 317 (419)
Q Consensus 251 --~pklIi~~~--s~~p-~----~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~--~~~~-~~Div~~S~hK~l~- 317 (419)
+..+|++.. ...+ . ...+++|+++|++||+++|+|++| .|+...|... ..+. ..|+++ +.|.+.
T Consensus 202 ~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~-tG~GrtG~~fa~~~~gv~PDi~t--~gK~l~g 278 (428)
T PRK07986 202 RHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIA-TGFGRTGKLFACEHAGIAPDILC--LGKALTG 278 (428)
T ss_pred CCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccc-cCCccCCCeeeecccCCCCCEEE--echhhhC
Confidence 344666653 1222 1 234899999999999999999998 6653222210 1111 357875 789984
Q ss_pred C-CCeeEEEEeCCCcchhhHHHHhhhcc-----cCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHH
Q 014724 318 G-PRGGMIFFKKDPVLGVELESAINNAV-----FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLV 391 (419)
Q Consensus 318 G-prgG~i~~~~~~~~~~~l~~~i~~~~-----~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~ 391 (419)
| ...|.+++++ ++.+.+.... ...+.++. +...++...+|+.+.++ .+.+++.++.++|.+.|+
T Consensus 279 G~~p~~av~~~~------~i~~~~~~~~~~~~~~~~T~~g~-p~~~aaa~a~L~~i~~~---~~~~~~~~~g~~l~~~l~ 348 (428)
T PRK07986 279 GTMTLSATLTTR------EVAETISNGEAGCFMHGPTFMGN-PLACAVANASLSLLESG---DWQQQVAAIEAQLREELA 348 (428)
T ss_pred CcccCcchhchH------HHHHHhhcCCCCccccCCCCCcC-HHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHH
Confidence 3 2455556666 5666654321 12233332 23333333456665433 346777777888888887
Q ss_pred hC
Q 014724 392 EL 393 (419)
Q Consensus 392 ~~ 393 (419)
++
T Consensus 349 ~l 350 (428)
T PRK07986 349 PL 350 (428)
T ss_pred HH
Confidence 64
No 341
>PRK06541 hypothetical protein; Provisional
Probab=98.92 E-value=2.6e-07 Score=95.60 Aligned_cols=249 Identities=18% Similarity=0.103 Sum_probs=128.3
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccC---
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--- 190 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~--- 190 (419)
-+|.|.+|+.+.+.. .... ....+ .++.. + .+.+++.+++..+.+ ...+.+||++|++.++.....
T Consensus 69 ~~p~v~~Av~~q~~~-~~~~-~~~~~--~~~~~--~--~la~~l~~~~p~~~~---~v~f~~sGseAve~AlklAr~~~~ 137 (460)
T PRK06541 69 GRAELAEAAAKQAGT-LAFF-PLWSY--AHPPA--I--ELAERLAALAPGDLN---RVFFTTGGSEAVESAWKLAKQYFK 137 (460)
T ss_pred CCHHHHHHHHHHHhh-CcCc-ccccc--CCHHH--H--HHHHHHHHhCCCCcC---EEEEcCCcHHHHHHHHHHHHHHHH
Confidence 478999998888753 2111 11111 12211 1 234567676543222 225667899999988754321
Q ss_pred ----C-CCEEEEeCCCCCccccCcccccccccccccc------------ccEEEecccCCCC---CCCC--------HHH
Q 014724 191 ----P-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLDEST---GLVD--------YDM 242 (419)
Q Consensus 191 ----p-GD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~------------~~~~v~~~~~~~~---~~iD--------~d~ 242 (419)
+ ..+|+...-.|.|... +. ++.++. ++..++++.- .. +.-| ++.
T Consensus 138 ~~g~~~r~~ii~~~~~yHG~t~-~a------~s~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 209 (460)
T PRK06541 138 LTGKPGKHKVISRAIAYHGTTQ-GA------LAITGLPAFKAPFEPLVPGGFRVPNTNF-YRAPELGDDPEAFGRWAADR 209 (460)
T ss_pred hcCCCCccEEEEEcCcccCcch-hh------hcCcCChhhccccCCCCCCcEEeCCCcc-ccccccCCCHHHHHHHHHHH
Confidence 1 3678877655433311 11 111110 1122222110 00 1112 367
Q ss_pred HHHHhhhc---CCeEEEEcCC--CCCCcCC----hHHHHHHHHHhCCEEEEeccc-cccccccCCcCCCCC-CCcEEEeC
Q 014724 243 LEKTAILF---RPKLIIAGAS--AYPRDFD----YPRMRQIADAVGALLMMDMAH-ISGLVAASVVADPFK-YCDVVTTT 311 (419)
Q Consensus 243 Le~~l~~~---~pklIi~~~s--~~p~~~d----l~~I~~ia~~~ga~livD~ah-~~Gl~~~g~~~~~~~-~~Div~~S 311 (419)
+++.+... +..+|++..- ..+...+ +++|+++|++||+++|+|++| .+|-++.......++ ..|+++
T Consensus 210 l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv~PDivt-- 287 (460)
T PRK06541 210 IEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGYVPDIIT-- 287 (460)
T ss_pred HHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhhhhhhcCCCCCEEE--
Confidence 78777532 3445666531 1122233 899999999999999999997 344332210000111 358775
Q ss_pred CCCcCC-CC-CeeEEEEeCCCcchhhHHHHhhhc--cc--CCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHH
Q 014724 312 THKSLR-GP-RGGMIFFKKDPVLGVELESAINNA--VF--PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRA 385 (419)
Q Consensus 312 ~hK~l~-Gp-rgG~i~~~~~~~~~~~l~~~i~~~--~~--~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~ 385 (419)
++|.++ |. +.|.+++++ ++.+.+... .+ ..+.++ ++...++....++.+..+ ...+++.++.++
T Consensus 288 ~gK~l~~G~~pigav~~~~------~i~~~~~~~~~~~~~~~T~~g-np~~~aaala~l~~l~~~---~~~~~~~~~g~~ 357 (460)
T PRK06541 288 CAKGITSGYSPLGAMIASD------RLFEPFLDGPTMFLHGYTFGG-HPVSAAVALANLDIFERE---GLLDHVRDNEPA 357 (460)
T ss_pred ecccccCCccceeEEEEcH------HHHHHhhcCCCccccCCCCCC-CHHHHHHHHHHHHHHHhc---cHHHHHHHHHHH
Confidence 789995 43 566667766 455544321 11 112222 222233323345554432 346777888888
Q ss_pred HHHHHHhC
Q 014724 386 LASRLVEL 393 (419)
Q Consensus 386 l~~~L~~~ 393 (419)
|.+.|+++
T Consensus 358 l~~~L~~l 365 (460)
T PRK06541 358 FRATLEKL 365 (460)
T ss_pred HHHHHHHh
Confidence 99888775
No 342
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=98.91 E-value=1.7e-07 Score=96.90 Aligned_cols=248 Identities=15% Similarity=0.099 Sum_probs=126.6
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHcc--CC
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--KP 191 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all--~p 191 (419)
-+|.|.+|+.+.+.+....+.. .+ .++ .+.++.+++.+++.....+ ...+++||++|+++++.... ..
T Consensus 71 ~~p~v~~ai~~q~~~~~~~~~~--~~--~~~----~~~~la~~L~~~~p~~~~~--~v~f~~sGseA~e~AlklAr~~tg 140 (451)
T PRK06918 71 SHPKVKEALHKQVDQYIHTGFN--VM--MYE----PYIELAEKLAALAPGSFDK--KVLFLNSGAEAVENAVKIARKYTK 140 (451)
T ss_pred CCHHHHHHHHHHHHhccCcccc--cc--ccH----HHHHHHHHHHHhCCCCCCC--EEEEcCCcHHHHHHHHHHHHHHhC
Confidence 4789999998887642111111 01 112 2223446677776432111 23567789999998885442 22
Q ss_pred CCEEEEeCCCCCccccCccccccccccccc-------------cccEEEecccCC--CCCCCC-------HHHHHHHhh-
Q 014724 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTS-------------IYFESMPYRLDE--STGLVD-------YDMLEKTAI- 248 (419)
Q Consensus 192 GD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g-------------~~~~~v~~~~~~--~~~~iD-------~d~Le~~l~- 248 (419)
..+|+...-.|.|... +. ++..+ -.+..++++... ..+..+ .+.+++.+.
T Consensus 141 r~~ii~~~~~yHG~t~-~~------ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (451)
T PRK06918 141 RQGIISFSRGFHGRTL-MT------MTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFIS 213 (451)
T ss_pred CCcEEEECCCcCccch-hh------hhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHh
Confidence 3568877655444321 11 11111 001222322100 001100 223444332
Q ss_pred ---hcCCeEEEEcCC--CCC----CcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC----CCcEEEeCCCCc
Q 014724 249 ---LFRPKLIIAGAS--AYP----RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----YCDVVTTTTHKS 315 (419)
Q Consensus 249 ---~~~pklIi~~~s--~~p----~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~----~~Div~~S~hK~ 315 (419)
..+..+||+..- +.+ ....+++|+++|++||+++|.|+++ .|+...+.. .++. ..|++ |++|+
T Consensus 214 ~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~-tg~gr~g~~-~a~~~~~v~pDi~--t~sK~ 289 (451)
T PRK06918 214 EVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQ-TGFARTGKY-FAIEHFDVVPDLI--TVSKS 289 (451)
T ss_pred hcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccc-cCcCccCce-ehhHhcCCCCCEE--eeehh
Confidence 124556666531 111 1223799999999999999999994 566444421 1222 25755 68999
Q ss_pred C-CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHh
Q 014724 316 L-RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE 392 (419)
Q Consensus 316 l-~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~ 392 (419)
+ +|.+.|++++++ ++.+.+.......+.++......++ ..+++.+.++++ .+++.+..+++.+.|++
T Consensus 290 l~~G~pig~v~~~~------~i~~~~~~~~~~~T~~g~~l~~aaa-~a~l~~i~~~~~---~~~~~~~g~~l~~~l~~ 357 (451)
T PRK06918 290 LGAGVPISGVIGRK------EIMDESAPGELGGTYAGSPLGCAAA-LAVLDIIEKENL---NDRAIELGKVVMNRFEE 357 (451)
T ss_pred hcCCCccEEEEEcH------HHHhccCCCCcCcCCCcCHHHHHHH-HHHHHHHHHCCH---HHHHHHHHHHHHHHHHH
Confidence 8 678889999987 6766664333323333333333333 234555433333 34444445666666654
No 343
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.91 E-value=2.1e-08 Score=97.73 Aligned_cols=275 Identities=16% Similarity=0.149 Sum_probs=164.9
Q ss_pred hcccccccCCCC----hHHHHHHHhhhhhccCCCCCCCCCCCCchhH-HHHHHHHHHHHHHHHcCCCCCCCceeEecCCh
Q 014724 103 KSLELIASENFT----SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEY-IDELETLCQKRALAAFNLDENKWGVNVQPLSG 177 (419)
Q Consensus 103 ~~i~L~~sen~~----~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~-~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sG 177 (419)
+.+|+ +|.||+ .+++++.....+ .+|+-|..|-|-+.|+.. .-.+| +++++++|++.. ++.+-|
T Consensus 95 ~~~N~-aS~NfL~l~~~~~ike~a~~~l-rkyGvGsCGPrGFYGt~DvHldlE----~~iakF~G~E~a-----ivYs~g 163 (467)
T KOG1358|consen 95 DVLNF-ASANFLGLIENEEIKEEASFTL-RKYGVGSCGPRGFYGTIDVHLDLE----KRIAKFMGTEDA-----IVYSYG 163 (467)
T ss_pred eeecc-cchhhhhhcccHHHHHHHHHHH-HHhCCCCcCCCcccccceeecccH----HHHHHhhCCcce-----eeeccc
Confidence 45666 567775 688999888877 468777766543334432 24555 689999999984 566778
Q ss_pred HHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhc------C
Q 014724 178 SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF------R 251 (419)
Q Consensus 178 t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~------~ 251 (419)
-.++..++.++.+.||.|.+..-.+.+.. +.++++.- ....+. ..|.+++|+++.+. +
T Consensus 164 F~ti~S~ipafsKrGDIi~~de~~nfaIq--------~GlqlSRS--~i~~Fk------hndm~~lerll~E~~~~~~K~ 227 (467)
T KOG1358|consen 164 FSTIESAIPAFSKRGDIIFVDEAVNFAIQ--------KGLQLSRS--TISYFK------HNDMEDLERLLPEQEDEDQKN 227 (467)
T ss_pred cchhhhcchhhhccCcEEEEehhhhHHHH--------HHHhhhhh--eeEEec------CCCHHHHHHhccCcchhhhhc
Confidence 78888999999999999998864332211 12222211 222222 36777787766321 2
Q ss_pred Ce------EEEEcC--CCCCCcCChHHHHHHHHHhCCEEEEecccccccccc---CC--cC-CCCCCCcEEEeCCCCcCC
Q 014724 252 PK------LIIAGA--SAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAA---SV--VA-DPFKYCDVVTTTTHKSLR 317 (419)
Q Consensus 252 pk------lIi~~~--s~~p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~---g~--~~-~~~~~~Div~~S~hK~l~ 317 (419)
|| .|++.. -|++...++.+|.++..||...++.|+...+|..+. |. +. .+.+..|++++|+.-+++
T Consensus 228 ~k~~~~Rrfiv~EGl~~N~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~ala 307 (467)
T KOG1358|consen 228 PKKALTRRFIVVEGLYANTGDICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALA 307 (467)
T ss_pred cccccceEEEEEEeeccCCCcccccHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeeccccccc
Confidence 22 344432 466788899999999999999999999988887654 22 11 223367999999887763
Q ss_pred CCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcE
Q 014724 318 GPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYK 396 (419)
Q Consensus 318 GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~ 396 (419)
.-|||..++. .+ -..+++....+-+.-..|.....+|.. ++..... -....+.+++....+-+.|+.. |+.
T Consensus 308 -s~GgFc~G~~-~i---~~hQrLSg~~Y~fSAslPp~la~aa~~-ai~i~~~--~p~~~~~L~~k~~~~H~~l~~~s~~~ 379 (467)
T KOG1358|consen 308 -SGGGFCAGKS-FI---ADHQRLSGSGYCFSASLPPYLAGAAIK-AILIEEW--NPEIVQPLRAKVAKFHAALSSNSGFI 379 (467)
T ss_pred -ccCceeecce-ee---EeeeeccccceeeeccCchhhhhhHHH-HHHHHhh--CcchhhhhhccccccchhhhcCCceE
Confidence 3567777644 11 122333322211111233332223322 3322211 1224455555566677777775 677
Q ss_pred EecCCCcceeEEEEeCC
Q 014724 397 LVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 397 v~~~~t~~hlv~vd~~~ 413 (419)
+.. ...+.++.+-+++
T Consensus 380 v~~-~~~SPi~hl~l~~ 395 (467)
T KOG1358|consen 380 VSG-SPESPIIHLQLER 395 (467)
T ss_pred Eec-CcCCceeeeeecc
Confidence 654 4566766665543
No 344
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.89 E-value=8.4e-08 Score=105.16 Aligned_cols=226 Identities=15% Similarity=0.110 Sum_probs=133.7
Q ss_pred HHHHHHHHcCCCCCCCceeEecC-ChHHHHHHHHHHc-c--CCCCEEEEeCCCCCccccCccccccccccccccccEEEe
Q 014724 153 CQKRALAAFNLDENKWGVNVQPL-SGSPANFEVYTAI-L--KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMP 228 (419)
Q Consensus 153 ~~~~la~~~g~~~~~~~v~V~~~-sGt~A~~~~~~al-l--~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~ 228 (419)
.|..++++.|++.. |.... .+|.+.++++.+. . +++++|++++..|..+..... .. ..+.+++++.
T Consensus 114 ~Qt~i~eLtGm~~a----NaSl~d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~----t~--a~~~g~~v~~ 183 (939)
T TIGR00461 114 FQTVVSDLTGLPVA----NASLLDEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVLH----TR--AKPFGIEVIV 183 (939)
T ss_pred HHHHHHHHHCCChh----hhhccchhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHHH----HH--HHhcCcEEEE
Confidence 67889999999973 33333 3444445555553 2 345899998877654331100 01 1223334443
Q ss_pred cccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC-CCcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC-CCc
Q 014724 229 YRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY-PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCD 306 (419)
Q Consensus 229 ~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~-p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~-~~D 306 (419)
+|+++|++.+ ++..+++.+|++ +...|+++|.+++|++|++++++.-..+.. .+..|-+ |+|
T Consensus 184 ---------~~~~~l~~~~---~~~~v~~q~Pn~~G~ied~~~i~~~~h~~gal~~~~ad~~al~----ll~~Pge~GaD 247 (939)
T TIGR00461 184 ---------VDCSDIKKAV---DVFGCLLQYPATDGSILDYKQLIDALHSHKSLVSVAADLMALT----LLTPPGHYGAD 247 (939)
T ss_pred ---------EcHHHHhhcC---CEEEEEEECCCCCeEEecHHHHHHHHHHcCCEEEEEechHHhC----CcCCHHHcCCc
Confidence 3455666554 356677777664 566799999999999999999966433221 1223333 899
Q ss_pred EEEeCCCCc-----CCCCCeeEEEEeCCCcchhhHHHHhhhc------------ccC-CCC----------CCCh---HH
Q 014724 307 VVTTTTHKS-----LRGPRGGMIFFKKDPVLGVELESAINNA------------VFP-GLQ----------GGPH---NH 355 (419)
Q Consensus 307 iv~~S~hK~-----l~GprgG~i~~~~~~~~~~~l~~~i~~~------------~~~-~~~----------g~p~---~~ 355 (419)
|++++.++. |+||..|++.++++ +...+... .|. .+| ++.+ ..
T Consensus 248 i~vg~~q~fg~p~g~GGP~aG~~a~~~~------l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNICt~q 321 (939)
T TIGR00461 248 IVLGSSQRFGVPMGYGGPHAAFFAVKDE------YNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNICTAQ 321 (939)
T ss_pred EEeeCCCccCCCCCCCCCceeeeeecHh------hHhhCCCCceeEEecCCCCccceeecccccccccccccCcchhHHH
Confidence 998877764 36899999999884 22221100 000 011 1111 12
Q ss_pred HHHHHHHH--HHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeEEEEe
Q 014724 356 TIGGLAVC--LKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDL 411 (419)
Q Consensus 356 ~iaala~a--l~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~vd~ 411 (419)
.+.|+.++ +..+...++++..+++..++.+|++.|.+.|+++..+ .--+.+.|++
T Consensus 322 aL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~G~~~~~~-~fF~~~~v~~ 378 (939)
T TIGR00461 322 VLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLENDPHELINK-TWFDTLTVKV 378 (939)
T ss_pred HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC-CccceEEEEe
Confidence 22232222 2333445678889999999999999999999988753 2223355555
No 345
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.89 E-value=4.5e-07 Score=93.07 Aligned_cols=268 Identities=13% Similarity=0.048 Sum_probs=139.9
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHcc----
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all---- 189 (419)
-+|+|.+|+.+.+.+ ....... .+. ++. .+ ...+++.+.+....+ ...+.+||++|++.++....
T Consensus 61 ~~p~v~~ai~~q~~~-~~~~~~~--~~~-~~~--~~--~lae~L~~~~p~~~~---~v~f~~sGseAve~AlklAr~~~~ 129 (429)
T PRK06173 61 NHPRLNAAATNQLAK-MSHIMFG--GFT-HEP--AV--ELAQKLLEILPPSLN---KIFFADSGSVAVEVAMKMALQYQQ 129 (429)
T ss_pred CCHHHHHHHHHHHHh-cCCcccc--ccC-CHH--HH--HHHHHHHhhCCCCcC---EEEEeCCchHHHHHHHHHHHHHHH
Confidence 468899988887753 2110010 011 121 12 234566666642222 22566789999998875442
Q ss_pred ---CCC-CEEEEeCCCCCccccCcccccccccccccc-------------ccEEEecccCCC--C-CCCCHHHHHHHhhh
Q 014724 190 ---KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-------------YFESMPYRLDES--T-GLVDYDMLEKTAIL 249 (419)
Q Consensus 190 ---~pG-D~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~-------------~~~~v~~~~~~~--~-~~iD~d~Le~~l~~ 249 (419)
++| .+|+...-.|.|.. .+. ++.++. ....++++.... . ..-+++.+++.+..
T Consensus 130 ~~g~~~r~~ii~~~~~yHG~t-~~a------~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i~~ 202 (429)
T PRK06173 130 AKGEVQRTKFATIRSGYHGDT-WHA------MSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDLLEQ 202 (429)
T ss_pred HhCCCCCcEEEEECCCcCCcc-hhh------hccCCCchhhhhcccccCCCCeEeCCCCcccchhHHHHHHHHHHHHHHh
Confidence 133 56888776554421 110 111110 012222221100 0 01246677787753
Q ss_pred --cCCeEEEEcCC--CC-C----CcCChHHHHHHHHHhCCEEEEeccccccccccCCc--CCCCC-CCcEEEeCCCCcCC
Q 014724 250 --FRPKLIIAGAS--AY-P----RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTTTHKSLR 317 (419)
Q Consensus 250 --~~pklIi~~~s--~~-p----~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~--~~~~~-~~Div~~S~hK~l~ 317 (419)
.+..+|++..- .. + -..-+++|+++|++||+++|+|++| .|+.-.|.. ...++ ..|+++ +.|.+.
T Consensus 203 ~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~-tG~GrtG~~~a~~~~gv~PDiv~--~gK~l~ 279 (429)
T PRK06173 203 KGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIA-TGFGRTGKLFALEHAGVVPDIMC--IGKALT 279 (429)
T ss_pred CCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchh-cCCCcCCcchHHHhcCCCCCEEE--eehhhh
Confidence 24567777641 22 1 1233799999999999999999998 675322321 11122 468887 789984
Q ss_pred -C-CCeeEEEEeCCCcchhhHHHHhhhc-----ccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHH
Q 014724 318 -G-PRGGMIFFKKDPVLGVELESAINNA-----VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRL 390 (419)
Q Consensus 318 -G-prgG~i~~~~~~~~~~~l~~~i~~~-----~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L 390 (419)
| ...+.++.++ ++.+.+... ....+.++ ++...++...+|+.+.++ ...+++.++.++|.+.|
T Consensus 280 gG~~p~~a~~~~~------~i~~~~~~~~~~~~~~~~T~~g-~p~~~aaa~a~l~~i~~~---~~~~~~~~~g~~l~~~L 349 (429)
T PRK06173 280 GGYLTLSATITTE------AIAQTICSGEAKCFMHGPTFMA-NPLACAIAAESIRLLLES---PWQQNIQRIEAQLKQEL 349 (429)
T ss_pred CCccccceEEecH------HHHHHHhcCCCCccccCCCCCc-CHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHH
Confidence 4 2456666666 555554321 11122233 233333334456665432 34677778888899988
Q ss_pred HhC-CcEEecC-CCcceeEEEEeC
Q 014724 391 VEL-GYKLVSG-GSDNHLVLVDLR 412 (419)
Q Consensus 391 ~~~-G~~v~~~-~t~~hlv~vd~~ 412 (419)
++. ++..+.+ ....+++-|.+.
T Consensus 350 ~~~~~~~~v~~vRg~Gl~~~iel~ 373 (429)
T PRK06173 350 APAAEFDSVAEVRVLGAIGVVEMK 373 (429)
T ss_pred HHhhcCCCeeeeeccceEEEEEeC
Confidence 864 4543321 124566666664
No 346
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=98.87 E-value=4.1e-07 Score=93.79 Aligned_cols=249 Identities=17% Similarity=0.094 Sum_probs=129.9
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHcc----
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all---- 189 (419)
-+|+|.+++.+.+.+ ...... +...++. .. ...+++.+++....+ ...+.+||++|++.++....
T Consensus 66 ~~p~v~~ai~~ql~~-l~~~~~---~~~~~~~---~~-~la~~L~~~~p~~~~---~v~f~~sGseAve~AlklAr~~~~ 134 (445)
T PRK09221 66 GRPEIVEAVARQAAT-LDYAPA---FQMGHPL---AF-ELAERLAELAPGGLD---HVFFTNSGSESVDTALKIALAYHR 134 (445)
T ss_pred CCHHHHHHHHHHHHh-ccCccc---cccCCHH---HH-HHHHHHHHhCCCCCC---EEEEeCCcHHHHHHHHHHHHHHHH
Confidence 478999998888754 211111 1111221 11 234667777643222 22567789999998885432
Q ss_pred --C-C-CCEEEEeCCCCCccccCccccccccccccc------------cccEEEecccCCCC--C--------CCCHHHH
Q 014724 190 --K-P-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTS------------IYFESMPYRLDEST--G--------LVDYDML 243 (419)
Q Consensus 190 --~-p-GD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g------------~~~~~v~~~~~~~~--~--------~iD~d~L 243 (419)
. + ..+|+...-.|.|.. .+. ++..+ ..+..++++.+... + .-+.+++
T Consensus 135 ~~g~~~r~~ii~~~~~yHG~t-~ga------ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 207 (445)
T PRK09221 135 ARGQGTRTRLIGRERGYHGVG-FGG------ISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELADDL 207 (445)
T ss_pred hcCCCCCcEEEEECCCcCccc-hhh------hccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHHHHHHHHHHH
Confidence 1 1 247888776544331 110 11111 01122332210000 0 0113577
Q ss_pred HHHhhhc---CCeEEEEcCC--CCCCcCC----hHHHHHHHHHhCCEEEEeccccccccccCCc--CCCCC-CCcEEEeC
Q 014724 244 EKTAILF---RPKLIIAGAS--AYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTT 311 (419)
Q Consensus 244 e~~l~~~---~pklIi~~~s--~~p~~~d----l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~--~~~~~-~~Div~~S 311 (419)
++.++.. +..+|++..- ..+...+ +++|+++|++||+++|+|++|. |+.-.|.. ..-+. ..|+++
T Consensus 208 ~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~t-G~GRtG~~~~~~~~gv~PDi~~-- 284 (445)
T PRK09221 208 ERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVIT-GFGRLGAAFAAERFGVTPDIIT-- 284 (445)
T ss_pred HHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhh-CCCcCchhhHHHhcCCCCCEEE--
Confidence 7777532 3456776531 2223334 8999999999999999999973 43221211 01111 347764
Q ss_pred CCCcCC-C-CCeeEEEEeCCCcchhhHHHHhhhc-------ccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHH
Q 014724 312 THKSLR-G-PRGGMIFFKKDPVLGVELESAINNA-------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN 382 (419)
Q Consensus 312 ~hK~l~-G-prgG~i~~~~~~~~~~~l~~~i~~~-------~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n 382 (419)
+.|.+. | .+.|.+++++ ++.+.+... ....+.+++... .++...+|+.+.++ ...+++.++
T Consensus 285 ~gK~l~gG~~Pi~av~~~~------~i~~~~~~~~~~~~~~~~~~T~~~~pl~-~aaa~a~L~~i~~~---~l~~~~~~~ 354 (445)
T PRK09221 285 FAKGLTNGAIPMGAVIASD------EIYDAFMQGPEYAIEFFHGYTYSAHPVA-CAAGLATLDIYREE---DLFERAAEL 354 (445)
T ss_pred eccccccCcccceeeEEcH------HHHHhhccCcccccccccccCCCcCHHH-HHHHHHHHHHHHhc---cHHHHHHHH
Confidence 579885 3 4566677776 555544321 111233333323 33333456665433 356778888
Q ss_pred HHHHHHHHHhC
Q 014724 383 CRALASRLVEL 393 (419)
Q Consensus 383 ~~~l~~~L~~~ 393 (419)
.++|.+.|+++
T Consensus 355 g~~l~~~l~~l 365 (445)
T PRK09221 355 APYFEDAVHSL 365 (445)
T ss_pred HHHHHHHHHhh
Confidence 88898888775
No 347
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.87 E-value=6.1e-07 Score=92.17 Aligned_cols=237 Identities=15% Similarity=0.094 Sum_probs=127.9
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHcc--CC
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--KP 191 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all--~p 191 (419)
-+|.|.+|+.+.+......++ .++ .+.+..+++.+.+.- .+ -..+.+||++|++.++.... ..
T Consensus 70 ~~p~v~~ai~~q~~~~~~~~~-------~~~----~~~~la~~l~~~~p~-~~---~v~f~~sGseA~e~AlklAr~~tg 134 (428)
T PRK12389 70 AHPHITKAITEAAENGVLYGT-------PTE----LEIEFAKMLKEAIPS-LE---KVRFVNSGTEAVMTTIRVARAYTG 134 (428)
T ss_pred CCHHHHHHHHHHHHhCCccCC-------CCH----HHHHHHHHHHHhCCC-Cc---EEEEeCCHHHHHHHHHHHHHHhhC
Confidence 478999999888754211111 112 112234566666541 21 12567889999998886442 22
Q ss_pred CCEEEEeCCCCCccccCccccccccccccccc-----------c------EEEecccCCCCCCCCHHHHHHHhhhc--CC
Q 014724 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-----------F------ESMPYRLDESTGLVDYDMLEKTAILF--RP 252 (419)
Q Consensus 192 GD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~-----------~------~~v~~~~~~~~~~iD~d~Le~~l~~~--~p 252 (419)
..+|+...-.|.|... + .+...+.. + ....++ ..|++.+++.++++ +.
T Consensus 135 r~~ii~~~~~yHG~t~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~~~l~~~~~~v 201 (428)
T PRK12389 135 RTKIIKFAGCYHGHSD-L------VLVAAGSGPSTLGTPDSAGVPKSIAQEVITVP------FNDIEALKEALDKWGDEV 201 (428)
T ss_pred CCEEEEECCCcCCChH-H------HHHhcCCcccccCCCCCCCCCCcccCceEEcC------CCCHHHHHHHHHhcCCcE
Confidence 3578877655433211 1 01111100 0 011111 23789999888643 34
Q ss_pred eEEEEcCC--CCCCcCC----hHHHHHHHHHhCCEEEEeccccccccccCC--cCCCCC-CCcEEEeCCCCcCC-CCCee
Q 014724 253 KLIIAGAS--AYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASV--VADPFK-YCDVVTTTTHKSLR-GPRGG 322 (419)
Q Consensus 253 klIi~~~s--~~p~~~d----l~~I~~ia~~~ga~livD~ah~~Gl~~~g~--~~~~~~-~~Div~~S~hK~l~-GprgG 322 (419)
.+|++..- ..+...+ +++|+++|++||+++|+||+|. |+- .+. ....++ ..|++ ++.|.++ |.+.|
T Consensus 202 aavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~t-G~R-t~~~~a~~~~gv~PDiv--t~gK~lggG~Pi~ 277 (428)
T PRK12389 202 AAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVIT-AFR-FMYGGAQDLLGVEPDLT--ALGKIIGGGLPIG 277 (428)
T ss_pred EEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEcccc-ccc-cCcchhhHHhCCCCCee--eechhhcCCCcee
Confidence 56666531 2222233 8999999999999999999974 431 110 001112 46876 4679984 44556
Q ss_pred EEEEeCCCcchhhHHHHhhh--c-ccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHh
Q 014724 323 MIFFKKDPVLGVELESAINN--A-VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE 392 (419)
Q Consensus 323 ~i~~~~~~~~~~~l~~~i~~--~-~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~ 392 (419)
.+++++ ++.+.+.. . ...++.++. +...++..+.|+.+.++ ...+++.++.++|.+.|++
T Consensus 278 av~~~~------~i~~~~~~~~~~~~~~T~~gn-pl~~Aaala~L~~l~~~---~l~~~~~~~g~~l~~~L~~ 340 (428)
T PRK12389 278 AYGGRK------DIMEQVAPLGPAYQAGTMAGN-PASMAAGIACLEVLQQE---GVYEKLDRLGAMLEEGILE 340 (428)
T ss_pred EEeEHH------HHHhhhccCCCcccccCCccC-HHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHH
Confidence 667776 56666532 1 111222222 22233333356666543 3466677777888888765
No 348
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=98.86 E-value=6.1e-07 Score=92.49 Aligned_cols=254 Identities=17% Similarity=0.110 Sum_probs=128.0
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHcc--CC
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--KP 191 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all--~p 191 (419)
-+|.|.+|+.+.+.+......+ .+. ++ .+.++.+++.+++.....+ ...+.+||++|++.++.... ..
T Consensus 71 ~~p~v~~Ai~~ql~~~~~~~~~--~~~--~~----~~~~lAe~L~~~~p~~~~~--~v~f~~SGsEA~e~AlklAr~~tg 140 (441)
T PRK05769 71 AHPKVVKAVKEQAEKFLHYSLT--DFY--YE----PAVELAERLVEIAPGGFEK--KVFFTNSGTESNEAAIKIARYHTG 140 (441)
T ss_pred CCHHHHHHHHHHHHhccCccCc--ccC--CH----HHHHHHHHHHHhCCCCCCC--EEEECCchHHHHHHHHHHHHHHhC
Confidence 4788999988887542110111 111 12 2223456777776421111 22566789999998885432 22
Q ss_pred CCEEEEeCCCCCccccCcccccc--cc-----ccccccccEEEecccCC------CCC----CCCHHHHHH-Hhhh----
Q 014724 192 HDRIMGLDLPHGGHLSHGFMTPK--RR-----VSGTSIYFESMPYRLDE------STG----LVDYDMLEK-TAIL---- 249 (419)
Q Consensus 192 GD~Vl~~~~~~~g~~s~~~~~~~--~~-----i~~~g~~~~~v~~~~~~------~~~----~iD~d~Le~-~l~~---- 249 (419)
.++|+...-.|.|... +..... .. ..-...++..++++... ++. .-+.+.+++ +++.
T Consensus 141 r~~Ii~~~~~yHG~t~-~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~ 219 (441)
T PRK05769 141 RKYIIAFLGAFHGRTY-GSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPP 219 (441)
T ss_pred CCeEEEECCCcCCccH-HHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhccCC
Confidence 3578877655433210 100000 00 00000011222221100 000 012344666 3321
Q ss_pred cCCeEEEEcCC--CCCCcCC----hHHHHHHHHHhCCEEEEeccccccccccCCcC--CCCC-CCcEEEeCCCCcC-CCC
Q 014724 250 FRPKLIIAGAS--AYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSL-RGP 319 (419)
Q Consensus 250 ~~pklIi~~~s--~~p~~~d----l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~--~~~~-~~Div~~S~hK~l-~Gp 319 (419)
.+..+|++..- +.+...+ +++|.++|++||+++|+|++|. |+...|... ..+. ..|+++ ++|.+ .|.
T Consensus 220 ~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~t-G~gr~G~~~a~~~~gv~pDivt--~~K~l~~G~ 296 (441)
T PRK05769 220 EEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQT-GMGRTGKMFAIEHFGVEPDIIT--LAKAIAGGL 296 (441)
T ss_pred CceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCcccceehhhccCCCCCEEE--EcccccCCc
Confidence 24566776531 2223334 8999999999999999999975 543333211 1112 358876 56998 456
Q ss_pred CeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC
Q 014724 320 RGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL 393 (419)
Q Consensus 320 rgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~ 393 (419)
+.|++++++ ++.+..... ...+.++. ....++...+|+.+. + ...+++.++.++|.+.|+++
T Consensus 297 p~gav~~~~------~i~~~~~~~-~~~T~~g~-p~~~aaa~a~L~~l~--~--~~~~~~~~~g~~l~~~L~~l 358 (441)
T PRK05769 297 PLGAVIGRA------ELMFLPPGS-HANTFGGN-PVAAAAALATLEELE--E--GLLENAQKLGEYLRKELKEL 358 (441)
T ss_pred ccEEEEEeh------hhhhcCCCC-CCCCCCcC-HHHHHHHHHHHHHHH--H--HHHHHHHHHHHHHHHHHHHH
Confidence 778888887 454333221 22233332 222333333565553 2 45677777788888888764
No 349
>PRK06062 hypothetical protein; Provisional
Probab=98.83 E-value=6.5e-07 Score=92.48 Aligned_cols=247 Identities=12% Similarity=0.031 Sum_probs=124.0
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHcc-CC-
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL-KP- 191 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all-~p- 191 (419)
-+|.|.+|+.+.+.. .....+ . + .++ ...+..+++.++..-..+ ...+.+||++|+..++.... -.
T Consensus 70 ~~p~v~~Ai~~q~~~-~~~~~~--~-~-~~~----~~~~lae~L~~~~p~~~~---~v~f~~SGsEAve~AlklAr~~tg 137 (451)
T PRK06062 70 QHPKVVAAIQEQAAR-LCTVAP--A-H-AND----ARSEAARLIAERAPGDLS---KVFFTNGGADANEHAVRMARLHTG 137 (451)
T ss_pred CCHHHHHHHHHHHHh-cCCcCC--c-c-CCH----HHHHHHHHHHHhCCCCCC---EEEEcCChHHHHHHHHHHHHHhhC
Confidence 478999999888753 221111 1 1 112 112234667776643222 22566789999998886442 22
Q ss_pred CCEEEEeCCCCCccccCcccccccccccccc-----------ccEEEecccCC-CCC--CCC-------HHHHHHHhhhc
Q 014724 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-----------YFESMPYRLDE-STG--LVD-------YDMLEKTAILF 250 (419)
Q Consensus 192 GD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~-----------~~~~v~~~~~~-~~~--~iD-------~d~Le~~l~~~ 250 (419)
..+|+...-.|.|.. .+. ++..+. .+..++++... ..+ .-| ++.++++++..
T Consensus 138 r~~ii~~~~~yHG~t-~~a------ls~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~ 210 (451)
T PRK06062 138 RPKVLSAYRSYHGGT-GSA------INLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIELE 210 (451)
T ss_pred CceEEEEeCCCCCCC-HHH------HhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHhc
Confidence 357887765543331 110 111110 01111111100 000 012 67788888532
Q ss_pred ---CCeEEEEcCC--CCCCcCC----hHHHHHHHHHhCCEEEEeccccccccccCCc--CCCCC-CCcEEEeCCCCcCCC
Q 014724 251 ---RPKLIIAGAS--AYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTTTHKSLRG 318 (419)
Q Consensus 251 ---~pklIi~~~s--~~p~~~d----l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~--~~~~~-~~Div~~S~hK~l~G 318 (419)
++.+||+..- +.+...+ +++|+++|++||+++|+|++|. |+.-.|.. ...+. ..|+++ +.|.++|
T Consensus 211 ~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~t-GfGRtG~~~a~~~~gv~PDi~t--~gK~lgg 287 (451)
T PRK06062 211 GPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMA-GFGRTGKWFAIEHFGVVPDLIT--FAKGVNS 287 (451)
T ss_pred CCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeecccc-CCCcCcHHHHHHhcCCCCCeee--echhhhc
Confidence 3556776531 1222233 8999999999999999999974 54222211 01112 458765 5799965
Q ss_pred --CCeeEEEEeCCCcchhhHHHHhhhcc--cCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHH-HHHHHHHHh
Q 014724 319 --PRGGMIFFKKDPVLGVELESAINNAV--FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNC-RALASRLVE 392 (419)
Q Consensus 319 --prgG~i~~~~~~~~~~~l~~~i~~~~--~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~-~~l~~~L~~ 392 (419)
.+.|.+++++ ++.+.+.... ...+.++. +...++...+|+.+.+++ ..+++.+.- ++|.+.|++
T Consensus 288 G~~Pigav~~~~------~i~~~~~~~~~~~~~T~~gn-pl~~Aaa~a~L~~l~~~~---l~~~~~~~G~~~l~~~L~~ 356 (451)
T PRK06062 288 GYVPLGGVAISE------AIAATFADRPYPGGLTYSGH-PLACAAAVATINAMEEEG---IVENAARIGAEVLGPGLRE 356 (451)
T ss_pred CCcCcEEEEEcH------HHHHHhccCCCCCCCCCCCC-HHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHH
Confidence 2455555665 5666554321 11233332 233333334566654333 344444443 355556654
No 350
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=98.83 E-value=4.3e-07 Score=85.90 Aligned_cols=218 Identities=18% Similarity=0.169 Sum_probs=125.5
Q ss_pred hhcccccccCCCChHHHHHHHhhhhhccCCCCC-CC-CCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHH
Q 014724 102 FKSLELIASENFTSRAVMEAVGSCLTNKYSEGL-PG-KRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP 179 (419)
Q Consensus 102 ~~~i~L~~sen~~~~~V~eal~~~l~~~y~~g~-p~-~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~ 179 (419)
...|.|..++...-|++.+....+...--.+|. .. --.|.|.+-.+.+-+...+.+.+.+|++-++ -|+..|+|++
T Consensus 30 ~g~imLggGNPa~iPem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~ygwnit~--~NIalTnGSQ 107 (417)
T COG3977 30 PGAIMLGGGNPARIPEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYGWNITA--QNIALTNGSQ 107 (417)
T ss_pred CCceeeCCCCcccChhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhCCCCcc--ceeeecCCcc
Confidence 344566555543446666554443322111121 00 0013333333444445667788888888643 3788899986
Q ss_pred -HHHHHHHHcc---CCCC--EEEE-eCCCCCccccCccccccccccccccccEEEe--cccCCC---CCCCCHHHHHHHh
Q 014724 180 -ANFEVYTAIL---KPHD--RIMG-LDLPHGGHLSHGFMTPKRRVSGTSIYFESMP--YRLDES---TGLVDYDMLEKTA 247 (419)
Q Consensus 180 -A~~~~~~all---~pGD--~Vl~-~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~--~~~~~~---~~~iD~d~Le~~l 247 (419)
|.+.++..+. ..|+ +|+. +.|+|-|+-..+ ..+-.|.... +++.+. .+.+|+++|+-.
T Consensus 108 s~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~---------l~~d~fVs~kP~iel~~~g~FKY~vDF~~l~i~- 177 (417)
T COG3977 108 SAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAG---------LEEDLFVSAKPNIELLPAGQFKYHVDFEHLHIG- 177 (417)
T ss_pred chHHHHHHHhcCccCCCcceeEeeccChhhccccccc---------cCccceeeccCCcccccccceeeccCHHHcccc-
Confidence 7777766553 2344 3443 345554432111 1111111111 111222 247899887642
Q ss_pred hhcCCeEEEEcCCCCCC-----cCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC---CCc-EEEeCCCCc-CC
Q 014724 248 ILFRPKLIIAGASAYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK---YCD-VVTTTTHKS-LR 317 (419)
Q Consensus 248 ~~~~pklIi~~~s~~p~-----~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~---~~D-iv~~S~hK~-l~ 317 (419)
..+.+|+++-|.||+ ..++.+|.++|++||+.++.|.|+ |.-+.+...+... +-. +.++|+||. |+
T Consensus 178 --e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAY--g~PFP~iifsd~~~~w~~NiilC~SLSK~GLP 253 (417)
T COG3977 178 --ESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAY--GVPFPGIIFSDATPLWNENIILCMSLSKLGLP 253 (417)
T ss_pred --cccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEeccc--CCCCCceecccccccCCCCEEEEeehhhcCCC
Confidence 367899999999985 335788999999999999999996 3323322222221 233 679999994 79
Q ss_pred CCCeeEEEEeCCCcchhhHHHHhh
Q 014724 318 GPRGGMIFFKKDPVLGVELESAIN 341 (419)
Q Consensus 318 GprgG~i~~~~~~~~~~~l~~~i~ 341 (419)
|.|.|.++.+. ++.+.+.
T Consensus 254 G~R~GIiIane------~viqait 271 (417)
T COG3977 254 GSRCGIIIANE------KVIQAIT 271 (417)
T ss_pred CcceeEEEccH------HHHHHHH
Confidence 99999999998 5655543
No 351
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=98.81 E-value=5.4e-07 Score=92.07 Aligned_cols=255 Identities=16% Similarity=0.147 Sum_probs=123.8
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCC-CCceeEec-CChHHHHHHHHHHcc--
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDEN-KWGVNVQP-LSGSPANFEVYTAIL-- 189 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~-~~~v~V~~-~sGt~A~~~~~~all-- 189 (419)
-+|.|.+|+.+.+... ++.....+ .++ ......+++.++...+.. ...+ +++ +||++|++.++....
T Consensus 52 ~~p~v~~ai~~ql~~~---~~~~~~~~-~~~----~~~~lae~l~~~~~~~~~~~~~~-~f~~~sGseA~e~AlklAr~~ 122 (412)
T TIGR02407 52 NNPKLKQALIDYLADD---GIIHSLDM-ATE----AKREFLETFNEIILKPRGLDYKV-QFPGPTGTNAVESALKLARKV 122 (412)
T ss_pred CCHHHHHHHHHHHhhc---cceecccc-CcH----HHHHHHHHHHHhccCccCCCceE-EEeCCCchHHHHHHHHHHhhh
Confidence 4799999998877532 11110011 112 111233556665321110 0002 343 699999998886542
Q ss_pred CCCCEEEEeCCCCCccccCccccccc-cc--cccc---cccEEEecccCCCCCCCCHHHHHHHhhhc-----CCeEEEEc
Q 014724 190 KPHDRIMGLDLPHGGHLSHGFMTPKR-RV--SGTS---IYFESMPYRLDESTGLVDYDMLEKTAILF-----RPKLIIAG 258 (419)
Q Consensus 190 ~pGD~Vl~~~~~~~g~~s~~~~~~~~-~i--~~~g---~~~~~v~~~~~~~~~~iD~d~Le~~l~~~-----~pklIi~~ 258 (419)
....+|+...-.|.|.. .+...... .. ...+ ..+..+|++.-.....-|++.+++.+.++ ++.+|++.
T Consensus 123 tgr~~ii~~~~~yHG~t-~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~aavi~E 201 (412)
T TIGR02407 123 TGRSNVVSFTNAFHGMT-LGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDLPAAVILE 201 (412)
T ss_pred cCCCeEEEECCCcCCch-HHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhccCCCCceEEEEec
Confidence 22357887765543331 11000000 00 0000 01122222100000013477788888632 34667765
Q ss_pred CCC--CCC----cCChHHHHHHHHHhCCEEEEeccccccccccCCc-C-CCCC-CCcEEEeCCCCcCC--CCCeeEEEEe
Q 014724 259 ASA--YPR----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLR--GPRGGMIFFK 327 (419)
Q Consensus 259 ~s~--~p~----~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~-~-~~~~-~~Div~~S~hK~l~--GprgG~i~~~ 327 (419)
.-. .+. ..-+++|+++|++||+++|.|+++. |+...|.. . .... ..|+++ ++|+++ |.+.|+++.+
T Consensus 202 pi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t-G~GRtG~~~a~~~~~v~PDi~~--~~K~lg~~G~pigav~~~ 278 (412)
T TIGR02407 202 TVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQA-GCGRTGTFFSFEPAGIEPDIVC--LSKSISGYGLPLALTLIK 278 (412)
T ss_pred cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCccchhHHhcccCCCCCEEE--echhccCCccceeEEEEc
Confidence 321 111 2347999999999999999999964 54222211 0 1111 458776 459984 6678999887
Q ss_pred CCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHH-hcChHHHHHHHHHHHHHHHHHHHHHh
Q 014724 328 KDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKH-AQSPEFKVYQNKVVSNCRALASRLVE 392 (419)
Q Consensus 328 ~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~-~~~~~~~~~~~~v~~n~~~l~~~L~~ 392 (419)
+ ++ +.+.......+.++ ++...++...+++. +.+ ..+.+++.+..++|.+.|++
T Consensus 279 ~------~~-~~~~~~~~~~T~~g-npl~~aaa~a~l~~~i~~---~~l~~~~~~~g~~l~~~l~~ 333 (412)
T TIGR02407 279 P------EL-DVWKPGEHNGTFRG-NNLAFVTATAALEYYWSD---DAFEKAVQRKSEIIQERLDR 333 (412)
T ss_pred h------hh-hccCCCccCCCCCc-cHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHHH
Confidence 7 34 33322222222222 22223332334554 332 23455556666667776654
No 352
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=98.81 E-value=9.3e-07 Score=91.16 Aligned_cols=248 Identities=13% Similarity=0.077 Sum_probs=124.5
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEec-CChHHHHHHHHHHcc--C
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQP-LSGSPANFEVYTAIL--K 190 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~-~sGt~A~~~~~~all--~ 190 (419)
-+|.|.+|+.+.+...... .. .++ .++ ...+..+++.+++......+.+ +++ +||++|++.++.... .
T Consensus 56 ~~p~i~~ai~~q~~~~~~~-~~--~~~-~~~----~~~~lae~L~~~~p~~~~~~~~-~f~~~sGsEA~e~AlklAr~~t 126 (442)
T TIGR00709 56 NHPNMKQKILDYLQSGLPL-HT--LDL-TTP----LKDAFIEALLNIIPKRKMDYKL-QFPGPSGADAVEAAIKLAKTYT 126 (442)
T ss_pred CCHHHHHHHHHHHHhccCc-cc--ccc-CcH----HHHHHHHHHHHhCCCcCCCccE-EEeCCCHHHHHHHHHHHHHHhc
Confidence 4789999998877542100 01 111 112 2222346777776432100112 444 799999998886442 2
Q ss_pred CCCEEEEeCCCCCccccCccccccccccccc------------cccEEEecccCCCCC------CCCHH----HHHHHhh
Q 014724 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS------------IYFESMPYRLDESTG------LVDYD----MLEKTAI 248 (419)
Q Consensus 191 pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g------------~~~~~v~~~~~~~~~------~iD~d----~Le~~l~ 248 (419)
...+|+...-.|.|.. .+. +..++ ..+..++++.. ... .-+.+ .+++.+.
T Consensus 127 gr~~Ii~~~~~yHG~t-~~~------~s~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (442)
T TIGR00709 127 GRTNVISFSGGFHGMT-IGA------LAVTGNLFAKNAVGMLMPGVQFMPYPHE-YRCPFGIGGEAGSNASIEYFENFIE 198 (442)
T ss_pred CCCeEEEEcCCcCCch-HHH------HhhcCChhhhccCCCCCCCcEEeCCCcc-ccccccCCchhHHHHHHHHHHHHHH
Confidence 2356887765544431 111 11111 01122222210 000 01112 2334332
Q ss_pred h-----cCCeEEEEcCC-CCCC-----cCChHHHHHHHHHhCCEEEEeccccccccccCCcCC--CCC-CCcEEEeCCCC
Q 014724 249 L-----FRPKLIIAGAS-AYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK-YCDVVTTTTHK 314 (419)
Q Consensus 249 ~-----~~pklIi~~~s-~~p~-----~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~--~~~-~~Div~~S~hK 314 (419)
. .+...|++... +++. ..-+++|+++|++||+++|.||++ .|+...|.... .++ ..|+++ ++|
T Consensus 199 ~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~-tGfGRtG~~~a~~~~gv~PDiv~--~gK 275 (442)
T TIGR00709 199 DVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQ-AGFGRSGTMFAFEHAGIEPDFVV--MSK 275 (442)
T ss_pred hhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccc-cCCCCCCchhHHHHcCCCCcEEE--Ecc
Confidence 1 24556666532 2221 224799999999999999999996 46543332111 122 458888 689
Q ss_pred cC-CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHh
Q 014724 315 SL-RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE 392 (419)
Q Consensus 315 ~l-~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~ 392 (419)
.+ .|.+.|++++++ ++ +.+.......+.++ +.-..++...+|+.+.++ ...+++.++.++|.+.|++
T Consensus 276 ~l~~G~Pigav~~~~------~~-~~~~~~~~~~T~~g-npla~aaa~a~L~~i~~~---~l~~~~~~~g~~l~~~L~~ 343 (442)
T TIGR00709 276 AVGGGLPLAVLLIAP------EF-DAWQPAGHTGTFRG-NQLAMVTGTEALNYWKDD---NLAQNAQERGERITSFLDD 343 (442)
T ss_pred cccCCcccEEEEEch------HH-hccCCCcCCCCCCc-CHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHH
Confidence 98 566778888876 43 33222112223333 222233333356555433 3455666677778777765
No 353
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=98.80 E-value=1.5e-07 Score=93.64 Aligned_cols=259 Identities=16% Similarity=0.098 Sum_probs=153.3
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCC------CCceeEecCChHHHHHHHHHHc-------cCCC-----------CEEE-
Q 014724 142 GNEYIDELETLCQKRALAAFNLDEN------KWGVNVQPLSGSPANFEVYTAI-------LKPH-----------DRIM- 196 (419)
Q Consensus 142 g~~~~~~lE~~~~~~la~~~g~~~~------~~~v~V~~~sGt~A~~~~~~al-------l~pG-----------D~Vl- 196 (419)
.++...+||....+|+.++++++.. ..|..|+.+|++++++.++.+- ++.+ +-|+
T Consensus 107 ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y 186 (511)
T KOG0628|consen 107 SSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAY 186 (511)
T ss_pred cCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEE
Confidence 3456789999999999999987641 1234577788888887776554 2222 1222
Q ss_pred EeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcC-----CeEEEEcC-CCCC-CcCChH
Q 014724 197 GLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFR-----PKLIIAGA-SAYP-RDFDYP 269 (419)
Q Consensus 197 ~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~-----pklIi~~~-s~~p-~~~dl~ 269 (419)
+.|-.|.+. .+.....+.+.+.++ .| +++.++.+.|++++++.. |-+|+.+. +.++ ...+++
T Consensus 187 ~SDqahssv--------eka~~i~~VklR~l~--td-~n~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~ca~D~l~ 255 (511)
T KOG0628|consen 187 CSDQAHSSV--------EKACLIAGVKLRALP--TD-ENFGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSSCAFDELE 255 (511)
T ss_pred ecCcccchH--------HHhHhhcceeEEEee--cc-cCcCCCHHHHHHHHHHHHhCCCccEEEEEeecCccccccccHH
Confidence 334333222 123334555444444 44 378999999999998653 34444432 2222 345799
Q ss_pred HHHHHHHHhCCEEEEecccccccccc-CCcCC---CCCCCcEEEeCCCCcCC-CCCeeEEEEeCCCc--------chhhH
Q 014724 270 RMRQIADAVGALLMMDMAHISGLVAA-SVVAD---PFKYCDVVTTTTHKSLR-GPRGGMIFFKKDPV--------LGVEL 336 (419)
Q Consensus 270 ~I~~ia~~~ga~livD~ah~~Gl~~~-g~~~~---~~~~~Div~~S~hK~l~-GprgG~i~~~~~~~--------~~~~l 336 (419)
+|..+|+++|+||+||+| |+|-.+. ..+.. -++++|-+.+..||++. -..+..++.+++.. ++ .+
T Consensus 256 elg~Vc~~~glWLHVDAA-YAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lWvkd~~~~~~~~~vdp~-yL 333 (511)
T KOG0628|consen 256 ELGPVCREEGLWLHVDAA-YAGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLWVKDGTKLSRAFNVDPL-YL 333 (511)
T ss_pred HhcchhhhcCEEEEeehh-hccccccCHHHHHHhhcchhhccccCChhheeEEeeeeecceeecCceeeeeeecChH-hh
Confidence 999999999999999999 5664321 11111 13478999999999862 23444444444310 00 11
Q ss_pred H-HHhhhcccCCCCCCChHHHHHHHHH--HHHHhcChHHHHHHHHHHHHHHHHHHHHHh-CCcEEecCCCcceeEEEEeC
Q 014724 337 E-SAINNAVFPGLQGGPHNHTIGGLAV--CLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 337 ~-~~i~~~~~~~~~g~p~~~~iaala~--al~~~~~~~~~~~~~~v~~n~~~l~~~L~~-~G~~v~~~~t~~hlv~vd~~ 412 (419)
. +........-...-|....+-++-. -++...-+.+++|.+++.+.++.|.+.+.+ .-|++. +.-|+-+|..|
T Consensus 334 ~h~~~~~~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~---~~~~lgLvcFR 410 (511)
T KOG0628|consen 334 KHAYQGSAPDYRHWQIPLGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRFEIV---NKRILGLVCFR 410 (511)
T ss_pred cchhhccCCCccccccccccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCcceee---cccccceeEEe
Confidence 1 1111111000112233344555543 345555556788888888888888877765 357776 35677788777
Q ss_pred Cccc
Q 014724 413 PMVT 416 (419)
Q Consensus 413 ~~~~ 416 (419)
.+++
T Consensus 411 lk~~ 414 (511)
T KOG0628|consen 411 LKGD 414 (511)
T ss_pred ecCC
Confidence 7765
No 354
>PRK06149 hypothetical protein; Provisional
Probab=98.78 E-value=1.9e-06 Score=97.06 Aligned_cols=249 Identities=14% Similarity=0.031 Sum_probs=124.2
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHH---HccC
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYT---AILK 190 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~---all~ 190 (419)
-+|+|.+|+.+.+... . ...++. ++...+ ..+++++++.-..+ ...+++||++|+..++. +...
T Consensus 600 ~hp~v~~Ai~~q~~~l-~---~~~~~~--~~~~~e----lae~L~~~~p~~~~---~v~f~~SGsEA~e~AlklAr~~tg 666 (972)
T PRK06149 600 GHPRLAAAAARQWSLL-N---TNSRFH--YAAVAE----FSERLAALAPDGLD---TVFLVNSGSEANDLAIRLAWAASG 666 (972)
T ss_pred CCHHHHHHHHHHHHhc-c---cccccc--CHHHHH----HHHHHHHhCCCCcC---EEEEeCCchHHHHHHHHHHHHhcC
Confidence 3799999998877532 1 112222 222222 33667777632111 23677899999999886 3333
Q ss_pred CCCEEEEeCCCCCccccCccccc--c--cccccc-c--cccEEEecccCCCC--C-CCC-----HHHHHHHhhh-----c
Q 014724 191 PHDRIMGLDLPHGGHLSHGFMTP--K--RRVSGT-S--IYFESMPYRLDEST--G-LVD-----YDMLEKTAIL-----F 250 (419)
Q Consensus 191 pGD~Vl~~~~~~~g~~s~~~~~~--~--~~i~~~-g--~~~~~v~~~~~~~~--~-~iD-----~d~Le~~l~~-----~ 250 (419)
..+|+..+-.|.|.. .+.... . ...... . ..+..++++ +... + ..| .+++++.++. .
T Consensus 667 -r~~ii~~~~~yHG~t-~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 743 (972)
T PRK06149 667 -RRDVVSVLEAYHGWT-VATDAVSTSIADNPQALETRPDWVHPVESP-NTYRGRFRGADSAADYVRDVVAQLEELDASGR 743 (972)
T ss_pred -CCeEEEEeCCCCCcC-hhHhhhcCCccccccccCCCCCCeEEeCCC-cccCCcCCCcccHHHHHHHHHHHHHHHhhcCC
Confidence 345776665443321 010000 0 000000 0 001112211 0000 1 011 2444444421 2
Q ss_pred CCeEEEEcC--CCCCCcCC----hHHHHHHHHHhCCEEEEeccc-cccccccCCcCCCC---C-CCcEEEeCCCCcCC-C
Q 014724 251 RPKLIIAGA--SAYPRDFD----YPRMRQIADAVGALLMMDMAH-ISGLVAASVVADPF---K-YCDVVTTTTHKSLR-G 318 (419)
Q Consensus 251 ~pklIi~~~--s~~p~~~d----l~~I~~ia~~~ga~livD~ah-~~Gl~~~g~~~~~~---~-~~Div~~S~hK~l~-G 318 (419)
++.+||+.. .+.+...+ +++|+++|++||+++|+||+| ++|-. |....-+ . ..||+ ++.|.++ |
T Consensus 744 ~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRt--G~~~~a~e~~gv~PDiv--t~gK~lg~G 819 (972)
T PRK06149 744 GLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRL--GHYFWGFEQQGVVPDII--TMAKGMGNG 819 (972)
T ss_pred ceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCcc--CccchhhhhcCCCCCEE--EecccccCC
Confidence 355676653 12222223 899999999999999999998 33333 2110011 1 46888 4579994 4
Q ss_pred CCeeEEEEeCCCcchhhHHHHhhh-cccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHh
Q 014724 319 PRGGMIFFKKDPVLGVELESAINN-AVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE 392 (419)
Q Consensus 319 prgG~i~~~~~~~~~~~l~~~i~~-~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~ 392 (419)
...|++++++ ++.+.+.. ..+..+.++......++ ...|+.+.++ ...+++.+.-++|.+.|++
T Consensus 820 ~Pl~av~~~~------~i~~~~~~~~~~~sT~~gnP~~~aaa-la~L~~i~~e---~l~~~~~~~G~~l~~~L~~ 884 (972)
T PRK06149 820 HPLGAVITRR------EIAEALEAEGYFFSSTGGSPVSCRIG-MAVLDVLREE---KLQENARRVGDHLKARLEA 884 (972)
T ss_pred eeeEEEEEcH------HHHhhhccCCcccCCCCCCHHHHHHH-HHHHHHHHhc---CHHHHHHHHHHHHHHHHHH
Confidence 4568888887 56666543 22222233322232233 3346655433 3455565566777777765
No 355
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.78 E-value=8.1e-07 Score=91.03 Aligned_cols=244 Identities=14% Similarity=0.016 Sum_probs=128.0
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccC---
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--- 190 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~--- 190 (419)
-+|.|.+|+.+.+.+ ....... .+ .++. .+ ...+++.++.....+ ...+.+||++|++.++.....
T Consensus 57 ~~p~i~~ai~~q~~~-~~~~~~~--~~-~~~~--~~--~lae~L~~~~p~~~~---~v~f~~SGseA~e~AlklAr~~~~ 125 (422)
T PRK05630 57 GHPRLKAAAHKQIDT-MSHVMFG--GL-THEP--AI--KLTRKLLNLTDNGLD---HVFYSDSGSVSVEVAIKMALQYSK 125 (422)
T ss_pred CCHHHHHHHHHHHHh-CCCcccC--Cc-CCHH--HH--HHHHHHHhhCCCCcC---EEEEeCCcHHHHHHHHHHHHHHHH
Confidence 478899998888754 2111110 01 1121 11 234566666532221 225677899999988754321
Q ss_pred ----CC-CEEEEeCCCCCccccCcccccccccccccc-------------ccEEEecccCCCCCCCC-------HHHHHH
Q 014724 191 ----PH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-------------YFESMPYRLDESTGLVD-------YDMLEK 245 (419)
Q Consensus 191 ----pG-D~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~-------------~~~~v~~~~~~~~~~iD-------~d~Le~ 245 (419)
++ .+|+...-.|.|.. .+. ++..+. .+..++++.. ...+ .+.+++
T Consensus 126 ~~g~~~r~~ii~~~~~yHG~t-~~a------ls~~~~~~~~~~~~~~~~~~~~~~p~~~~---~~~~~~~~~~~~~~~~~ 195 (422)
T PRK05630 126 GQGHPERTRLLTWRSGYHGDT-FAA------MSVCDPEGGMHSLWKGTLPEQIFAPAPPV---RGSSPQEISEYLRSLEL 195 (422)
T ss_pred hcCCCCCcEEEEECCCcCCcc-HHH------hccCCCcccccccccccCCCCeEcCCCcc---cCCChHHHHHHHHHHHH
Confidence 23 57888776543321 111 111110 0112222210 0112 234455
Q ss_pred HhhhcCCeEEEEcCC---CC----CCcCChHHHHHHHHHhCCEEEEeccccccccccCCcC--CCCC-CCcEEEeCCCCc
Q 014724 246 TAILFRPKLIIAGAS---AY----PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKS 315 (419)
Q Consensus 246 ~l~~~~pklIi~~~s---~~----p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~--~~~~-~~Div~~S~hK~ 315 (419)
.+. .+..+||+..- .. |....+++|+++|++||+++|+||+| .|+...|... ..++ ..|++ ++.|.
T Consensus 196 ~~~-~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~-tG~GrtG~~~a~~~~gv~PDi~--t~gK~ 271 (422)
T PRK05630 196 LID-ETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIA-TGFGRTGELFATLAAGVTPDIM--CVGKA 271 (422)
T ss_pred HHh-hceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecce-eCCCcCchhhHHHhcCCCCCee--eeech
Confidence 554 36677777641 11 22335799999999999999999998 5653222210 0111 35787 56899
Q ss_pred CCC--CCeeEEEEeCCCcchhhHHHHhhhc------ccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHH
Q 014724 316 LRG--PRGGMIFFKKDPVLGVELESAINNA------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALA 387 (419)
Q Consensus 316 l~G--prgG~i~~~~~~~~~~~l~~~i~~~------~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~ 387 (419)
++| +.+|++++++ ++.+.+... ....+.++ ++...++...+++.+.++ ...+++.++.++|.
T Consensus 272 l~gG~~p~~av~~~~------~i~~~~~~~~~~~~~~h~~T~~g-~Pla~aaa~aaL~~l~~~---~~~~~~~~~g~~l~ 341 (422)
T PRK05630 272 LTGGFMSFAATLCTD------KVAQLISTPNGGGALMHGPTFMA-NPLACAVAHASLEIIETG---MWRKQVKRIEAELI 341 (422)
T ss_pred hhcCccccceeeccH------HHHHHHhccCCCCccccCCCCcC-CHHHHHHHHHHHHHHHhC---cHHHHHHHHHHHHH
Confidence 954 6788888887 566655321 11122222 233344434456666533 23456667777777
Q ss_pred HHHHh
Q 014724 388 SRLVE 392 (419)
Q Consensus 388 ~~L~~ 392 (419)
+.|++
T Consensus 342 ~~L~~ 346 (422)
T PRK05630 342 AGLSP 346 (422)
T ss_pred HHHHH
Confidence 77764
No 356
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=98.78 E-value=1.6e-06 Score=89.88 Aligned_cols=247 Identities=16% Similarity=0.078 Sum_probs=127.3
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHcc--CC
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--KP 191 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all--~p 191 (419)
-+|.|.+|+.+.+.. +... ..++. ++... ++.+++++++....+ ...+.+||++|+.+++.... ..
T Consensus 88 ~~p~v~~Ai~~ql~~-~~~~--~~~~~--~~~~~----~lae~L~~~~p~~~~---~v~f~~sGseAve~AlklAr~~tg 155 (459)
T PRK06082 88 GHPHVIEKVKEQMAK-LPFS--PRRFT--NETAI----ECAEKLTEIAGGELN---RVLFAPGGTSAIGMALKLARHITG 155 (459)
T ss_pred CCHHHHHHHHHHHHh-CCCc--cCccC--CHHHH----HHHHHHHHhCCCCCC---EEEECCCcHHHHHHHHHHHHHhcC
Confidence 479999999888753 3221 11221 23222 234677777753222 23567789999998875442 22
Q ss_pred CCEEEEeCCCCCccccCcccccccccccccc------------ccEEEecccCCC-CC-CC------CHHHHHHHhhhc-
Q 014724 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLDES-TG-LV------DYDMLEKTAILF- 250 (419)
Q Consensus 192 GD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~------------~~~~v~~~~~~~-~~-~i------D~d~Le~~l~~~- 250 (419)
..+|+...-.|.|.. .+ .+...+. .+..++.+.... .+ .. +++.+++.+++.
T Consensus 156 r~~ii~~~~~yHG~t-~~------a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~ 228 (459)
T PRK06082 156 NFKVVSLWDSFHGAS-LD------AISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEKEG 228 (459)
T ss_pred CCEEEEEeCCCcCcc-HH------HHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhcCC
Confidence 367887765543321 11 0111110 112222111000 00 01 135577777532
Q ss_pred CCeEEEEcCCC-CCC-cCC---hHHHHHHHHHhCCEEEEeccccccccccCCc-C-CCCC-CCcEEEeCCCCcCCC--CC
Q 014724 251 RPKLIIAGASA-YPR-DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLRG--PR 320 (419)
Q Consensus 251 ~pklIi~~~s~-~p~-~~d---l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~-~-~~~~-~~Div~~S~hK~l~G--pr 320 (419)
+..+||+..-. .+. ..+ +++|+++|++||+++|+||+|. |+...|.. . ..+. ..|+++ +.|.++| ..
T Consensus 229 ~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~t-G~GRtG~~fa~e~~gv~PDiv~--~gKgl~gG~~P 305 (459)
T PRK06082 229 GIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPN-GMGRTGEWFTHQAYGIEPDILC--IGKGLGGGLVP 305 (459)
T ss_pred CEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCccchhhHhHhhCCCCCEEE--ecccccCCCCc
Confidence 34566665321 111 122 7999999999999999999974 54322211 0 0112 468887 6899954 25
Q ss_pred eeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHh
Q 014724 321 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE 392 (419)
Q Consensus 321 gG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~ 392 (419)
.|.+++++ ++...........+.++.... .++....|+.+.++ ...+++.++.++|.+.|++
T Consensus 306 ~~av~~~~------~i~~~~~~~~~~~T~~gnpl~-~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~ 367 (459)
T PRK06082 306 IAAMITKD------KYNTAAQISLGHYTHEKSPLG-CAAALATIEVIEQE---GLLEKVKADSQFMRERLLE 367 (459)
T ss_pred ceEEEEcH------HHHhhccCCCCCCCCCcCHHH-HHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHH
Confidence 56666666 444333211111233332222 33323345555432 3566777777888888866
No 357
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=98.71 E-value=4.4e-06 Score=86.50 Aligned_cols=252 Identities=15% Similarity=0.097 Sum_probs=127.1
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHcc--CC
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--KP 191 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all--~p 191 (419)
-+|.|.+|+.+.+.+- . +....+.. ++. .. +..+++.+++....+ -..+.+||++|++.++.... ..
T Consensus 70 ~~p~i~~Ai~~ql~~~-~--~~~~~~~~-~~~--~~--~lae~L~~~~p~~~~---~v~f~~SGsEA~e~AlklAr~~tg 138 (457)
T PRK05639 70 SHPKLVKAVQEQVALI-Q--HSMIGYTH-SER--AI--RVAEKLAEISPIENP---KVLFGLSGSDAVDMAIKVSKFSTR 138 (457)
T ss_pred CCHHHHHHHHHHHHhc-c--ccccCccC-CHH--HH--HHHHHHHhhCCCCcC---EEEEeCchHHHHHHHHHHHHHhcC
Confidence 4789999998887542 1 11111111 111 11 234667776654322 12567789999998885442 23
Q ss_pred CCEEEEeCCCCCccccCccccc------c-ccccccccccEEEecccCCCCC------CCCH--------HHHHHHhh--
Q 014724 192 HDRIMGLDLPHGGHLSHGFMTP------K-RRVSGTSIYFESMPYRLDESTG------LVDY--------DMLEKTAI-- 248 (419)
Q Consensus 192 GD~Vl~~~~~~~g~~s~~~~~~------~-~~i~~~g~~~~~v~~~~~~~~~------~iD~--------d~Le~~l~-- 248 (419)
..+|+...-.|.|... +.... . ....-.-..+..++++.. ... .-|. +.+++.+.
T Consensus 139 r~~ii~~~~~yHG~t~-~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~ 216 (457)
T PRK05639 139 RPWILAFIGAYHGQTL-GATSVAAFQSSQKRGFSPLMPNVVWIPYPNP-YRNPWGINGYEEPDELINRFLDYLENYVFSH 216 (457)
T ss_pred CCeEEEECCCcCCccH-HHHHHcCCCcccccCCCCCCCCceEeCCCcc-ccccccccccCCHHHHHHHHHHHHHHHHHHh
Confidence 3568877655433210 00000 0 000000001233343210 000 0122 23455442
Q ss_pred ---hcCCeEEEEcCC--CCC----CcCChHHHHHHHHHhCCEEEEeccccccccccCCc--CCCCC-CCcEEEeCCCCcC
Q 014724 249 ---LFRPKLIIAGAS--AYP----RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTTTHKSL 316 (419)
Q Consensus 249 ---~~~pklIi~~~s--~~p----~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~--~~~~~-~~Div~~S~hK~l 316 (419)
..+...||+..- +.+ ...-+++|+++|++||+++|+||+|. |+...|.. ...++ ..|+++ +.|.+
T Consensus 217 ~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~t-G~GrtG~~~a~~~~gv~PDiv~--~gK~l 293 (457)
T PRK05639 217 VVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQT-GIGRTGKWFASEWFEVKPDLII--FGKGV 293 (457)
T ss_pred hcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-ccCcCchHHHHHhcCCCCCEEE--echhh
Confidence 234567776531 111 12237999999999999999999985 64322321 01122 468888 68999
Q ss_pred C-CCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHh
Q 014724 317 R-GPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE 392 (419)
Q Consensus 317 ~-GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~ 392 (419)
+ |...|++++++ ++.+....... ++.++... ..++...+|+.+.++ ...++..+..++|.+.|++
T Consensus 294 ~gG~pi~av~~~~------~i~~~~~~~~~-~T~~g~p~-~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~ 359 (457)
T PRK05639 294 ASGMGLSGVIGRK------ELMDLTSGSAL-LTPAANPV-ISAAAEATLEIIEEE---NLLKNALKVGEFIKKRLLE 359 (457)
T ss_pred cCCCcceeEEehH------HHHhhcCCCcc-cCCCcCHH-HHHHHHHHHHHHHHc---cHHHHHHHHHHHHHHHHHH
Confidence 5 55557788877 45552221111 22333222 233333356655432 3456666677888888876
No 358
>PRK07480 putative aminotransferase; Validated
Probab=98.70 E-value=3.9e-06 Score=86.86 Aligned_cols=249 Identities=14% Similarity=0.016 Sum_probs=121.6
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccC---
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--- 190 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~--- 190 (419)
-+|.|.+|+.+.+.. ....... +...++ .+....+++.+++....+ -..+.+||++|++.++.....
T Consensus 67 ~~p~v~~Ai~~q~~~-~~~~~~~--~~~~~~----~~~~lae~L~~~~p~~~~---~v~f~~SGseA~e~AlklAr~~~~ 136 (456)
T PRK07480 67 GRKELADAAARQMRE-LPYYNTF--FKTTHP----PAIELAAKLAEVAPPGFN---HVFFTNSGSEANDTVLRMVRHYWA 136 (456)
T ss_pred CCHHHHHHHHHHHHh-cCCcccc--cccCCH----HHHHHHHHHHHhCCCCcC---EEEEeCCcHHHHHHHHHHHHHHHH
Confidence 478899998887753 2110010 001112 122234667777643222 125678899999988854421
Q ss_pred ----CC-CEEEEeCCCCCccccCcccccccccccccc------------ccEEEecccC---CCCC-CCC-----HHHHH
Q 014724 191 ----PH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLD---ESTG-LVD-----YDMLE 244 (419)
Q Consensus 191 ----pG-D~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~------------~~~~v~~~~~---~~~~-~iD-----~d~Le 244 (419)
+| .+|+...-.|.|.... .++..+. .+..++++.. +.+. ..+ .+.++
T Consensus 137 ~~g~~~r~~ii~~~~~yHG~tl~-------a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~ 209 (456)
T PRK07480 137 LKGKPQKKVIISRKNGYHGSTVA-------GASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLE 209 (456)
T ss_pred hcCCCCCcEEEEECCCcCCcchh-------hhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHH
Confidence 33 4688776554332111 0111110 0111221100 0000 011 26666
Q ss_pred HHhhh---cCCeEEEEcCC--CCCCc----CChHHHHHHHHHhCCEEEEeccccccccccCCcC--CCCC-CCcEEEeCC
Q 014724 245 KTAIL---FRPKLIIAGAS--AYPRD----FDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTT 312 (419)
Q Consensus 245 ~~l~~---~~pklIi~~~s--~~p~~----~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~--~~~~-~~Div~~S~ 312 (419)
+.+.. .+..+||+..- +.+.. .-+++|+++|++||+++|+||++ .|+.-.|... ..++ ..|+++ +
T Consensus 210 ~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~-tGfGRtG~~~a~~~~gv~PDiv~--~ 286 (456)
T PRK07480 210 AKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVI-CGFGRTGEWFGSQHFGIKPDLMT--I 286 (456)
T ss_pred HHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechh-hCCCcCcchhhhhhcCCCCCeee--e
Confidence 55532 23556776531 11221 22799999999999999999997 3442222110 0111 357765 4
Q ss_pred CCcCCCC--CeeEEEEeCCCcchhhHHHHhh--hc--ccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHH-HHHHHH
Q 014724 313 HKSLRGP--RGGMIFFKKDPVLGVELESAIN--NA--VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKV-VSNCRA 385 (419)
Q Consensus 313 hK~l~Gp--rgG~i~~~~~~~~~~~l~~~i~--~~--~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v-~~n~~~ 385 (419)
.|.++|- +.|.+++++ ++.+.+. .. ...++.++. +...++...+|+.+.+++ ..+++ .+..++
T Consensus 287 gK~l~gG~~Pi~av~~~~------~i~~~~~~~~~~~~~~~T~~gn-pl~~Aaa~a~L~~l~~~~---l~~~~~~~~g~~ 356 (456)
T PRK07480 287 AKGLTSGYIPMGAVGVGD------RVAEVLIEEGGEFNHGFTYSGH-PVAAAVALANLRILRDEG---IVERVRDDTGPY 356 (456)
T ss_pred ehhhccCCccceEEEEcH------HHHHHHhcCCCCcccCCCCCcC-HHHHHHHHHHHHHHHhCC---HHHHHHHHHHHH
Confidence 7998541 455555665 5655552 11 112233332 223333334566654333 34455 355566
Q ss_pred HHHHHHh
Q 014724 386 LASRLVE 392 (419)
Q Consensus 386 l~~~L~~ 392 (419)
|.+.|++
T Consensus 357 l~~~l~~ 363 (456)
T PRK07480 357 LQKRLRE 363 (456)
T ss_pred HHHHHHH
Confidence 6666655
No 359
>PRK07482 hypothetical protein; Provisional
Probab=98.70 E-value=3.4e-06 Score=87.39 Aligned_cols=248 Identities=16% Similarity=0.034 Sum_probs=126.4
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHcc----
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all---- 189 (419)
-+|+|.+|+.+.+... ........+ .++ .+....+++.+++..+.+ ...+.+||++|++.++....
T Consensus 67 ~~p~v~~Av~~q~~~~-~~~~~~~~~--~~~----~~~~lAe~L~~~~p~~~~---~v~f~~sGSEAve~AlKlAr~~~~ 136 (461)
T PRK07482 67 GRTEVAEAIAEQAKEL-AYYHTYVGH--GTE----ASITLSKRIIDRAPAGMS---KVYYGLSGSDANETQIKLVWYYNN 136 (461)
T ss_pred CCHHHHHHHHHHHHhc-Ccccccccc--CCH----HHHHHHHHHHHhCCCCcC---EEEEeCchHHHHHHHHHHHHHHHH
Confidence 4789999998887542 100110001 112 122234667776642222 22566789999998886542
Q ss_pred --C-C-CCEEEEeCCCCCccccCcccccccccccccc------------ccEEEecccCCCC----C-------CCCHHH
Q 014724 190 --K-P-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLDEST----G-------LVDYDM 242 (419)
Q Consensus 190 --~-p-GD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~------------~~~~v~~~~~~~~----~-------~iD~d~ 242 (419)
. + ..+|+...-.|.|.- .+. .+..+. .+..++++.. .+ + .-|++.
T Consensus 137 ~~g~~~r~~Ii~~~~~YHG~t-~ga------~s~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~~~~~~~~~ 208 (461)
T PRK07482 137 VLGRPEKKKIISRWRGYHGSG-VVT------GSLTGLSLFHQHFDLPIARVLHTEAPHY-YRRADAGMSEEQFSAYCADE 208 (461)
T ss_pred hcCCCCCceEEEecCccCCcc-Hhh------hhccCCchhhhccCCCCCCCEEcCCCcc-ccccccCCCHHHHHHHHHHH
Confidence 1 2 257888765544421 110 111110 0112221110 00 0 114678
Q ss_pred HHHHhhh---cCCeEEEEcCC--CCC----CcCChHHHHHHHHHhCCEEEEeccccccccccCCcC--CCCC-CCcEEEe
Q 014724 243 LEKTAIL---FRPKLIIAGAS--AYP----RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTT 310 (419)
Q Consensus 243 Le~~l~~---~~pklIi~~~s--~~p----~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~--~~~~-~~Div~~ 310 (419)
+++.+.. .+...||+..- +.+ ...-+++|+++|++||+++|.||++ .|+.-.|... .-++ ..|+++.
T Consensus 209 l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~-tGfGRtG~~~a~~~~gv~PDiv~~ 287 (461)
T PRK07482 209 LEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVV-TGFGRLGSMFGSDHYGIEPDLITV 287 (461)
T ss_pred HHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccc-cCCCcCcchhhHHhcCCCCCEEEE
Confidence 8887742 23566777532 112 1223799999999999999999996 4542222110 1122 4688885
Q ss_pred CCCCcCC-C-CCeeEEEEeCCCcchhhHHHHhhhc-------ccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHH
Q 014724 311 TTHKSLR-G-PRGGMIFFKKDPVLGVELESAINNA-------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVS 381 (419)
Q Consensus 311 S~hK~l~-G-prgG~i~~~~~~~~~~~l~~~i~~~-------~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~ 381 (419)
.|.++ | .+.|.+++++ ++.+.+... ...++.++ ++-..++..+.++.+.++ ...+++.+
T Consensus 288 --gKgl~gG~~Pi~av~~~~------~i~~~~~~~~~~~~~~~h~~T~~g-npl~~Aaa~a~L~~~~~~---~l~~~~~~ 355 (461)
T PRK07482 288 --AKGLTSAYAPLSGSIVGE------KVWDVLEQGSDEHGAIGHGWTYSG-HPICAAAALANLDILERE---NLVGNAAE 355 (461)
T ss_pred --ccccccCccccceeeecH------HHHHHHhcccccCCccccCCCCCc-CHHHHHHHHHHHHHHHhC---CHHHHHHH
Confidence 69984 4 2455566665 455544321 11122222 222233333356655443 34555666
Q ss_pred HHHHHHHHHHh
Q 014724 382 NCRALASRLVE 392 (419)
Q Consensus 382 n~~~l~~~L~~ 392 (419)
.-++|.+.|++
T Consensus 356 ~g~~l~~~L~~ 366 (461)
T PRK07482 356 VGAYFRARLRA 366 (461)
T ss_pred HHHHHHHHHHH
Confidence 67777777764
No 360
>PRK07678 aminotransferase; Validated
Probab=98.70 E-value=1.8e-06 Score=89.23 Aligned_cols=245 Identities=16% Similarity=0.069 Sum_probs=126.1
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHcc----
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all---- 189 (419)
-+|.|.+|+.+.+..- . +... .+ .++. .+ .+.+++.++++... ...+.+||++|++.++....
T Consensus 64 ~~p~v~~ai~~q~~~~-~--~~~~-~~-~~~~--~~--~lae~l~~~~~~~~----~v~f~~sGseA~e~AlklAr~~t~ 130 (451)
T PRK07678 64 GRKELAEAAYEQLKTL-S--YFPL-TQ-SHEP--AI--KLAEKLNEWLGGEY----VIFFSNSGSEANETAFKIARQYHA 130 (451)
T ss_pred CCHHHHHHHHHHHHhc-C--cccc-cc-CCHH--HH--HHHHHHHHhCCCCC----EEEEeCCcHHHHHHHHHHHHHHHH
Confidence 4789999988877532 1 1111 11 2221 22 24466777775432 22556789999998875442
Q ss_pred ---CCC-CEEEEeCCCCCccccCccccccccccccc------------cccEEEecccCCCCC-------CCCH---HHH
Q 014724 190 ---KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTS------------IYFESMPYRLDESTG-------LVDY---DML 243 (419)
Q Consensus 190 ---~pG-D~Vl~~~~~~~g~~s~~~~~~~~~i~~~g------------~~~~~v~~~~~~~~~-------~iD~---d~L 243 (419)
++| .+|+...-.|.|.. .+. +..++ .++..++++.. ... ..|. +.+
T Consensus 131 ~~g~~~r~~ii~~~~~yHG~t-~~a------ls~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l 202 (451)
T PRK07678 131 QKGEPHRYKFISRYRAYHGNS-MGA------LAATGQAQRKYKYEPLAPGFLHVPPPDC-YRMPGIESEDIYDLECVKEI 202 (451)
T ss_pred hcCCCCCcEEEEECCCcCCcc-HHH------hhcCCCcccccccCCCCCCCEEeCCCcc-ccccccCChHHHHHHHHHHH
Confidence 123 57887765544431 111 11111 01122222100 000 0112 335
Q ss_pred HHHhhh---cCCeEEEEcCC--CCCC----cCChHHHHHHHHHhCCEEEEeccc-cccccccC-CcCCCCC-CCcEEEeC
Q 014724 244 EKTAIL---FRPKLIIAGAS--AYPR----DFDYPRMRQIADAVGALLMMDMAH-ISGLVAAS-VVADPFK-YCDVVTTT 311 (419)
Q Consensus 244 e~~l~~---~~pklIi~~~s--~~p~----~~dl~~I~~ia~~~ga~livD~ah-~~Gl~~~g-~~~~~~~-~~Div~~S 311 (419)
++.++. .++.+||+..- +.+. ..-+++++++|++||+++|.||++ .+|-++.. ... .+. ..|+++.
T Consensus 203 ~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~-~~gv~PDivt~- 280 (451)
T PRK07678 203 DRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAFGFM-NYGVKPDIITM- 280 (451)
T ss_pred HHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchhHHHH-hcCCCCCEEEe-
Confidence 666642 24567777632 1222 223799999999999999999997 23333210 011 122 4688865
Q ss_pred CCCcCCC--CCeeEEEEeCCCcchhhHHHHhhhc------ccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHH
Q 014724 312 THKSLRG--PRGGMIFFKKDPVLGVELESAINNA------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNC 383 (419)
Q Consensus 312 ~hK~l~G--prgG~i~~~~~~~~~~~l~~~i~~~------~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~ 383 (419)
.|.++| .+.|.+++++ ++.+.+... ...++.++... ..++...+|+.+.++ ...+++.+..
T Consensus 281 -gK~lggG~~Pi~av~~~~------~i~~~~~~~~~~~~~~h~~T~~gnp~-~~aaa~a~l~~l~~~---~~~~~~~~~g 349 (451)
T PRK07678 281 -AKGITSAYLPLSATAVKK------EIYEAFKGKGEYEHFRHVNTFGGNPA-ACALALKNLEIMENE---NLIERSAQLG 349 (451)
T ss_pred -ecccccCCcceeEEEEcH------HHHHHHhccCcccccccCCCCCcCHH-HHHHHHHHHHHHHhC---CHHHHHHHHH
Confidence 799854 3567777777 566655421 11223333222 233333356665433 3456666667
Q ss_pred HHHHHHHHh
Q 014724 384 RALASRLVE 392 (419)
Q Consensus 384 ~~l~~~L~~ 392 (419)
++|.+.|++
T Consensus 350 ~~l~~~l~~ 358 (451)
T PRK07678 350 ELLLEQLKE 358 (451)
T ss_pred HHHHHHHHH
Confidence 777777754
No 361
>PRK05965 hypothetical protein; Provisional
Probab=98.69 E-value=3.3e-06 Score=87.47 Aligned_cols=257 Identities=15% Similarity=0.068 Sum_probs=128.0
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHcc----
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all---- 189 (419)
-+|+|.+|+.+.+.+- . +....+...++ ....+.+++.+++..+.+ ...+.+||++|++.++....
T Consensus 63 ~~p~i~~Ai~~q~~~~-~--~~~~~~~~~~~----~~~~lae~L~~~~p~~~~---~v~f~~sGSEAve~AlKlAr~~~~ 132 (459)
T PRK05965 63 GQESIVEAAAEQMREL-P--YATGYFHFGSE----PAIRLAAKLAERAPGSLN---HVYFTLGGSDAVDSAVRFIRHYWN 132 (459)
T ss_pred CCHHHHHHHHHHHHhc-C--CcccccccCCH----HHHHHHHHHHhhCCCCcC---EEEEeCChhHHHHHHHHHHHHHHH
Confidence 4789999998887542 1 11100001122 111234667676642222 22455789999998885432
Q ss_pred --C-C-CCEEEEeCCCCCccccCcc-cccccccc-ccc---cccEEEecccCC-CCCCCC--------HHHHHHHhhhc-
Q 014724 190 --K-P-HDRIMGLDLPHGGHLSHGF-MTPKRRVS-GTS---IYFESMPYRLDE-STGLVD--------YDMLEKTAILF- 250 (419)
Q Consensus 190 --~-p-GD~Vl~~~~~~~g~~s~~~-~~~~~~i~-~~g---~~~~~v~~~~~~-~~~~iD--------~d~Le~~l~~~- 250 (419)
. + ..+|+...-.|.|...... .+...... ..+ .....++++... ....-| ++.+++.++..
T Consensus 133 ~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~ 212 (459)
T PRK05965 133 ATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAELG 212 (459)
T ss_pred hcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHHHHHHHHHHHHHHhcC
Confidence 1 2 3578888766544311000 00000000 000 001222222100 001123 35777777532
Q ss_pred --CCeEEEEcCC--CCC----CcCChHHHHHHHHHhCCEEEEeccccccccccCCcC--CCCC-CCcEEEeCCCCcCC-C
Q 014724 251 --RPKLIIAGAS--AYP----RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLR-G 318 (419)
Q Consensus 251 --~pklIi~~~s--~~p----~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~--~~~~-~~Div~~S~hK~l~-G 318 (419)
+...||+..- +.+ ...-+++|+++|++||+++|.||++ .|+.-.|... ..+. ..|+++. .|.++ |
T Consensus 213 ~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~-tGfGRtG~~~a~~~~gv~PDiv~~--gKgl~gG 289 (459)
T PRK05965 213 ADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVI-TGFGRTGPLFACEAEGVVPDLMTV--AKGLTSG 289 (459)
T ss_pred CCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechh-ccCccCchhhhHhhcCCCCCeEEe--chhhccC
Confidence 3566776532 112 1223799999999999999999996 4542222110 1112 4688885 69984 4
Q ss_pred C-CeeEEEEeCCCcchhhHHHHhhhc-------ccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHH
Q 014724 319 P-RGGMIFFKKDPVLGVELESAINNA-------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRL 390 (419)
Q Consensus 319 p-rgG~i~~~~~~~~~~~l~~~i~~~-------~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L 390 (419)
. +.|.+++++ ++.+.+... ....+.++ ++...++....|+.+.++ ...+++.+.-++|.+.|
T Consensus 290 ~~Pi~av~~~~------~i~~~~~~~~~~~~~~~h~~T~~g-npl~~Aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~l 359 (459)
T PRK05965 290 YVPMGAVLMSD------HVYQGIADGAGAAAPVGHGYTYSA-HPVSAAVGLEVLRLYHEG---GLLANGQKAGPRFAAGL 359 (459)
T ss_pred CcceeEEEEcH------HHHHHHhccccccccccccCCCCC-CHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHH
Confidence 2 567777776 566555321 11122222 222233323346555433 34566677777888888
Q ss_pred HhC
Q 014724 391 VEL 393 (419)
Q Consensus 391 ~~~ 393 (419)
+++
T Consensus 360 ~~l 362 (459)
T PRK05965 360 DAL 362 (459)
T ss_pred Hhh
Confidence 763
No 362
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=98.66 E-value=2.3e-06 Score=85.26 Aligned_cols=253 Identities=14% Similarity=0.062 Sum_probs=124.1
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHcc----
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all---- 189 (419)
-+|.+.+++.+.+... ...... . +. ++. .. ...+++.+.++-..+ ...+..||++|++.++....
T Consensus 33 ~~p~i~~ai~~~~~~~-~~~~~~-~-~~-~~~---~~-~la~~L~~~~p~~~~---~v~f~~sGseAve~Alkla~~~~~ 101 (339)
T PF00202_consen 33 NHPEIAEAIAEQANKL-NYVSFS-G-FT-HPE---AA-ELAEKLAELFPGGLD---RVFFANSGSEAVEAALKLARQYHN 101 (339)
T ss_dssp T-HHHHHHHHHHHHHC-SSCSTT-T-SE-EHH---HH-HHHHHHHHHSSTTEE---EEEEESSHHHHHHHHHHHHHHHHH
T ss_pred CccccchhHHHHhhhc-cccccc-c-ee-ccc---hh-hhhhhhhhccccccc---eeeeccCchHHHHHHHHHhhcccc
Confidence 4689999998876532 211111 1 11 121 11 234677788733221 22556789999998886554
Q ss_pred ---C-CCCEEEEeCCCCCccccCcccccc------ccccccccccEEEecccCCCC---CCCCHHHHHHHhh---hcCCe
Q 014724 190 ---K-PHDRIMGLDLPHGGHLSHGFMTPK------RRVSGTSIYFESMPYRLDEST---GLVDYDMLEKTAI---LFRPK 253 (419)
Q Consensus 190 ---~-pGD~Vl~~~~~~~g~~s~~~~~~~------~~i~~~g~~~~~v~~~~~~~~---~~iD~d~Le~~l~---~~~pk 253 (419)
. ...+|+...-.|.|... +..... +........+..+|++.. .. ..-..+.+++.+. ..+..
T Consensus 102 ~~~~~~r~~il~~~~~yHG~t~-~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ia 179 (339)
T PF00202_consen 102 KRAYTGRRKILAFEGSYHGRTL-GALSLTGNPPYRKGFGPLYPGVVFVPFPDP-AADEEEQACLNALEELIAALNADEIA 179 (339)
T ss_dssp HTHHHTTTEEEEETTTB-TSSH-HHHHHSSSTHHHTTTCSSSTTEEEEETTCH-HHHHHHHHHHHHHHHHHHHHHGGGEE
T ss_pred cccccCCceEEEeeeeeeccCc-ccccccCCccccccccccccccccccCCcc-chhhhHHHHHHHHHHHHHhhcCCcEE
Confidence 2 34688888766544321 000000 000000011122332210 00 0001122333332 22445
Q ss_pred EEEEcCC--CCC----CcCChHHHHHHHHHhCCEEEEeccccccccccCCcC--CCCC-CCcEEEeCCCCcC-CCCCeeE
Q 014724 254 LIIAGAS--AYP----RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSL-RGPRGGM 323 (419)
Q Consensus 254 lIi~~~s--~~p----~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~--~~~~-~~Div~~S~hK~l-~GprgG~ 323 (419)
.||+..- +.+ ...-+++|+++|++||+++|+||++ .|+.-.|... ..+. ..|+++.+ |++ .|...|.
T Consensus 180 avivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~-tG~gRtG~~~a~~~~gv~PDiv~~g--K~l~gG~p~sa 256 (339)
T PF00202_consen 180 AVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQ-TGFGRTGKFFASEHYGVDPDIVTFG--KGLGGGLPISA 256 (339)
T ss_dssp EEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETT-TTTTTTSSSSGHHHHTSSSSEEEEE--GGGGTTSSEEE
T ss_pred EEEEeccccccCccccccchhhehcccccccccceeccccc-ccccccCCccceecccccCcccccc--cchhhhhhccc
Confidence 6777641 112 1223699999999999999999996 4543222211 0011 46999876 999 4556788
Q ss_pred EEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHh
Q 014724 324 IFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE 392 (419)
Q Consensus 324 i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~ 392 (419)
+++++ ++.+.+.......+.++... ..++....|+.+.++ .+.+++.+..++|.+.|++
T Consensus 257 v~~~~------~i~~~~~~~~~~~T~~g~p~-~~aaa~~~l~~~~~~---~~~~~~~~~g~~l~~~L~~ 315 (339)
T PF00202_consen 257 VLGSE------EIMEAFQPGSHGSTFGGNPL-SCAAALATLEILEEE---DLLERVRELGERLREGLRE 315 (339)
T ss_dssp EEEEH------HHHTTSCTTSSTCTTTT-HH-HHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHH
T ss_pred ccccc------hhhccccccccccccccchH-hhhhhhhHHHhhccH---HHHHHHHHHHHHHHHHHHH
Confidence 88887 56665543332223322222 222222345555432 2345555666667776655
No 363
>PRK06148 hypothetical protein; Provisional
Probab=98.66 E-value=5.5e-06 Score=93.50 Aligned_cols=247 Identities=17% Similarity=0.140 Sum_probs=127.3
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHcc--CC
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--KP 191 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all--~p 191 (419)
-+|.|.+|+.+.+..- . ...++. ++ .+.+..+++++++.-..+ ...+++||++|+..++.... ..
T Consensus 639 ~hp~v~~Ai~~q~~~l-~---~~~~~~--~~----~~~~lAe~L~~~~p~~~~---~v~f~nSGsEA~e~AlklAr~~tG 705 (1013)
T PRK06148 639 AHPRVVAAAARQAARL-N---TNTRYL--HD----AIVAYAERLTATLPDGLT---VAFFVNSGSEANSLALRLARAHTG 705 (1013)
T ss_pred CCHHHHHHHHHHHhhc-C---CcCCcC--CH----HHHHHHHHHHHhCCCCcC---EEEEeCCcHHHHHHHHHHHHHhcC
Confidence 3799999998887532 1 111121 12 122244667776643222 23567899999998885442 22
Q ss_pred CCEEEEeCCCCCccccCcccccccccccccc------------ccEEEecccC-CCCCC-CC-------HHHHHHHhhh-
Q 014724 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLD-ESTGL-VD-------YDMLEKTAIL- 249 (419)
Q Consensus 192 GD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~------------~~~~v~~~~~-~~~~~-iD-------~d~Le~~l~~- 249 (419)
..+|++..-.|.|.. .+. +..++. .+..++.+.. ...+. .| .+.+++.++.
T Consensus 706 r~~ii~~~~~YHG~t-~~a------~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~ 778 (1013)
T PRK06148 706 QRDAIVLDHAYHGTT-TEL------IDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAM 778 (1013)
T ss_pred CCeEEEEcCCccCCC-cch------hhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhh
Confidence 356887765543331 110 111110 0111111100 00011 11 1345555531
Q ss_pred ----cCCeEEEEcCC--CCCC----cCChHHHHHHHHHhCCEEEEeccccccccccCC--cC-CCCC-CCcEEEeCCCCc
Q 014724 250 ----FRPKLIIAGAS--AYPR----DFDYPRMRQIADAVGALLMMDMAHISGLVAASV--VA-DPFK-YCDVVTTTTHKS 315 (419)
Q Consensus 250 ----~~pklIi~~~s--~~p~----~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~--~~-~~~~-~~Div~~S~hK~ 315 (419)
.++.+||+..- +.+. ..-+++++++|++||+++|.||++ .|+.-.|. .. .-++ ..|+++. .|.
T Consensus 779 ~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVq-tGfGRtG~~~~a~e~~gv~PDivt~--gK~ 855 (1013)
T PRK06148 779 AAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQ-VGFGRVGSHWWAFETQGVVPDIVTM--GKP 855 (1013)
T ss_pred hccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecc-cCCCCCCCcchhhhhcCCCcceeee--ccc
Confidence 23566776531 1122 223799999999999999999997 34321221 10 0011 4588765 799
Q ss_pred C-CCCCeeEEEEeCCCcchhhHHHHhhhcc-cCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC
Q 014724 316 L-RGPRGGMIFFKKDPVLGVELESAINNAV-FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL 393 (419)
Q Consensus 316 l-~GprgG~i~~~~~~~~~~~l~~~i~~~~-~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~ 393 (419)
+ .|...|.+++++ ++.+.+.... +..+.++......++ ...++.+.++ ...+++.+.-++|.+.|+++
T Consensus 856 lggG~Plgav~~~~------ei~~~~~~g~~~~~Tf~gnpla~aaa-~a~L~~i~~e---~l~~~~~~~G~~l~~~L~~l 925 (1013)
T PRK06148 856 IGNGHPMGAVVTTR------EIADSFDNGMEYFNTFGGNPVSCAIG-LAVLDIIEDE---DLQRNALEIGNYLLAGLREL 925 (1013)
T ss_pred ccCCcceEEEEEcH------HHHhhccCCCccccCCCCCHHHHHHH-HHHHHHHhhc---cHHHHHHHHHHHHHHHHHHH
Confidence 8 455667777876 6766654321 223343333332333 3346655433 34566666677777777653
No 364
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.65 E-value=5.3e-06 Score=79.61 Aligned_cols=244 Identities=16% Similarity=0.191 Sum_probs=128.3
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHcc----
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all---- 189 (419)
.+|.+++|+.++...-+- .++.+|. ....++ .+.+.++||.+. + +-.++|.+|++.++...-
T Consensus 76 chpki~~aLqeq~~kLtl---ssrafYn--d~~~~f----~~~vt~lf~~~k----v-lpmnTGaEa~Eta~KLaR~wgy 141 (427)
T KOG1402|consen 76 CHPKIIKALQEQADKLTL---SSRAFYN--DVLGEF----AEYVTKLFGYDK----V-LPMNTGAEAVETACKLARKWGY 141 (427)
T ss_pred CCHHHHHHHHHHHhHhhh---hhHHHhh--hhHHHH----HHHHHHhcCcce----e-eecccchhHHHHHHHHHHHHHH
Confidence 689999999988763221 1211221 112334 377889999886 2 344578889988875432
Q ss_pred --C--CCCE-E-EEeCCCCCccccCccccccccccccccc-----cE-EEecccCCCCCCCCHHHHHHHhhhcCCeEEEE
Q 014724 190 --K--PHDR-I-MGLDLPHGGHLSHGFMTPKRRVSGTSIY-----FE-SMPYRLDESTGLVDYDMLEKTAILFRPKLIIA 257 (419)
Q Consensus 190 --~--pGD~-V-l~~~~~~~g~~s~~~~~~~~~i~~~g~~-----~~-~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~ 257 (419)
+ |.|+ + +...-.+ ||... ..+++++-. |. ++|..++ .-.--|.++|+..++..+...+++
T Consensus 142 ~~K~ip~nka~il~~~~nF-----hGrT~--~ais~s~d~ds~~~fgp~~P~~~~-~v~Y~d~eale~~l~~~~vaaFiv 213 (427)
T KOG1402|consen 142 RKKNIPKNKAKILSAENNF-----HGRTL--GAISLSTDPDSWDGFGPFLPGVVD-KVPYGDAEALEVALKSPNVAAFIV 213 (427)
T ss_pred hhccCCccceeEEEecccc-----cCcee--eeEEecCCcchhhccCCCCCCcce-eeccCCHHHHHHHhcCCCeeEEEe
Confidence 2 4443 3 3222111 22100 112222110 00 0110000 001247889999988755566655
Q ss_pred cCC------CCCCcCChHHHHHHHHHhCCEEEEeccccccccccCCcC-CCCC--CCcEEEeCCCCcCCCC--CeeEEEE
Q 014724 258 GAS------AYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA-DPFK--YCDVVTTTTHKSLRGP--RGGMIFF 326 (419)
Q Consensus 258 ~~s------~~p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~-~~~~--~~Div~~S~hK~l~Gp--rgG~i~~ 326 (419)
..- ..|-..-+++.+++|.+|++++|.|+.| .|+...|..- -..+ ..|+++. .|.|.|- +...+++
T Consensus 214 EPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQ-TGl~RTGk~la~d~env~PDivil--gKalSGG~~Pvsavl~ 290 (427)
T KOG1402|consen 214 EPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQ-TGLARTGKLLACDYENVRPDIVIL--GKALSGGVYPVSAVLA 290 (427)
T ss_pred eccccccceEeCCchhHHHHHHHHHhhcEEEEehhhh-hcccccCcEEEeehhhcCCCeEEE--eccccCCeeeeEEEEe
Confidence 421 1222334899999999999999999997 5765444321 1111 4588774 4887542 2334445
Q ss_pred eCCCcchhhHHHHhhhcccCCCC-CCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC
Q 014724 327 KKDPVLGVELESAINNAVFPGLQ-GGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL 393 (419)
Q Consensus 327 ~~~~~~~~~l~~~i~~~~~~~~~-g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~ 393 (419)
++ ++...++......+. |+|.- ...|+ ++|+.+.+ ++..++..+.-..|+..|+++
T Consensus 291 ~~------~im~~~~pgeHgsTyggNpLg-~~vai-Aalevi~e---ekL~era~~lG~~l~~~L~~l 347 (427)
T KOG1402|consen 291 DD------DIMLNIKPGEHGSTYGGNPLG-CAVAI-AALEVIVE---EKLVERAAKLGEILRDQLNKL 347 (427)
T ss_pred cH------HHHhccCCCccccccCCChHH-HHHHH-HHHHHHHH---HHHHHHHHHHHHHHHHHHHhc
Confidence 55 565556554333333 33321 11222 24555442 344566666666777777775
No 365
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.64 E-value=2.4e-06 Score=88.51 Aligned_cols=250 Identities=17% Similarity=0.092 Sum_probs=131.3
Q ss_pred CChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHcc---
Q 014724 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 189 (419)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all--- 189 (419)
.-+|.|.+|+.+.+.+ ...+.. ....++ .+....+++++++....+ ...+.+||++|++.++....
T Consensus 72 h~~p~v~~Ai~~ql~~-l~~~~~---~~~~~~----~~~~lae~L~~~~p~~~~---~v~f~~SGseAve~AlklAr~~~ 140 (460)
T PRK06916 72 HQVPELDEAIREQLNK-IAHSTL---LGLANV----PSILLAEKLIEVVPEGLK---KVFYSDSGATAVEIAIKMAFQYW 140 (460)
T ss_pred CCCHHHHHHHHHHHHh-CCCccc---cccCCH----HHHHHHHHHHHhCCCCCC---EEEEeCCcHHHHHHHHHHHHHHH
Confidence 4579999999888864 211111 011122 112244667777643222 23667899999998886442
Q ss_pred ----CCC-CEEEEeCCCCCccccCcccccccccccccc------------ccEEEecccC---CCCC------CCCHHHH
Q 014724 190 ----KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLD---ESTG------LVDYDML 243 (419)
Q Consensus 190 ----~pG-D~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~------------~~~~v~~~~~---~~~~------~iD~d~L 243 (419)
.+| .+|+...-.|.|.. .+ .++.++. .+..++++.. +.+. .-|++.+
T Consensus 141 ~~~g~tgr~~ii~~~~~YHG~t-~~------als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l 213 (460)
T PRK06916 141 QNKGKPKKQRFVTLKNAYHGDT-IG------AVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEEL 213 (460)
T ss_pred HhcCCCCCcEEEEECCcCCccc-HH------hHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHH
Confidence 233 57888876544421 11 1111110 0122222200 0000 1245677
Q ss_pred HHHhhh--cCCeEEEEcC-C--CCCC----cCChHHHHHHHHHhCCEEEEeccccccccccCCcC--CCCC-CCcEEEeC
Q 014724 244 EKTAIL--FRPKLIIAGA-S--AYPR----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTT 311 (419)
Q Consensus 244 e~~l~~--~~pklIi~~~-s--~~p~----~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~--~~~~-~~Div~~S 311 (419)
++.++. .+..+|++.. . +.+. ..-+++|+++|++||+++|.||++ .|+...|... ..+. ..|+++
T Consensus 214 ~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~-TG~GRtG~~~a~~~~gv~PDiv~-- 290 (460)
T PRK06916 214 EELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVA-TGFGRTGKMFACEHENVTPDIMT-- 290 (460)
T ss_pred HHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechh-hCCCcCchhhHHHhcCCCCCeee--
Confidence 777753 2455677664 1 1221 223799999999999999999996 5543222210 1112 468876
Q ss_pred CCCcCC-C-CCeeEEEEeCCCcchhhHHHHhhh------cc-cCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHH
Q 014724 312 THKSLR-G-PRGGMIFFKKDPVLGVELESAINN------AV-FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN 382 (419)
Q Consensus 312 ~hK~l~-G-prgG~i~~~~~~~~~~~l~~~i~~------~~-~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n 382 (419)
+.|.++ | ...|.+++++ ++.+.+.. .. ...+.++. ....++....|+.+.++ .+.+++.++
T Consensus 291 ~gK~l~gG~~Pi~av~~~~------ei~~~~~~~~~~~~~~~~~~T~~gn-pl~~aaa~a~l~~l~~~---~l~~~~~~~ 360 (460)
T PRK06916 291 AGKGLTGGYLPIAITVTTD------EIYNAFYGDYEEQKTFFHGHSYTGN-PLGCAVALANLELYEKT---NLIEQVARK 360 (460)
T ss_pred eehhhhcCccccceeeecH------HHHHHhhccccccCccccCCCCCCC-HHHHHHHHHHHHHHHhc---cHHHHHHHH
Confidence 579884 4 2566677776 56554431 11 12233332 22233333345555432 356677777
Q ss_pred HHHHHHHHHhC
Q 014724 383 CRALASRLVEL 393 (419)
Q Consensus 383 ~~~l~~~L~~~ 393 (419)
.++|.+.|+++
T Consensus 361 g~~l~~~l~~l 371 (460)
T PRK06916 361 TEYVATQLEDL 371 (460)
T ss_pred HHHHHHHHHHh
Confidence 88888888764
No 366
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=98.61 E-value=3.8e-06 Score=87.07 Aligned_cols=254 Identities=13% Similarity=0.091 Sum_probs=124.7
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCC--CCceeEec-CChHHHHHHHHHHcc-
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDEN--KWGVNVQP-LSGSPANFEVYTAIL- 189 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~--~~~v~V~~-~sGt~A~~~~~~all- 189 (419)
-+|.|.+|+.+.+.+....... .+ .++... ...+++.+++..... +. + +++ +||++|+..++....
T Consensus 80 ~~p~v~~Ai~~ql~~~~~~~~~---~~-~~~~~~----~la~~L~~~~p~~~~~~~~-v-~f~~~SGSEAve~AlklAr~ 149 (464)
T PRK06938 80 NHPVVIEAIQQVLADELPLHTL---DL-TTPVKD----QFVQDLFASLPEAFAREAK-I-QFCGPTGTDAVEAALKLVKT 149 (464)
T ss_pred CCHHHHHHHHHHHHhhhccccc---cc-CCHHHH----HHHHHHHHhCcccccccce-E-EEeCCCcHHHHHHHHHHHHH
Confidence 4799999999887543211110 11 122111 123455555432110 11 2 344 599999998886442
Q ss_pred CC-CCEEEEeCCCCCccccCccccccccc----cccc--cccEEEecccCCC-C--------CCCCHHHHHHHhhhc---
Q 014724 190 KP-HDRIMGLDLPHGGHLSHGFMTPKRRV----SGTS--IYFESMPYRLDES-T--------GLVDYDMLEKTAILF--- 250 (419)
Q Consensus 190 ~p-GD~Vl~~~~~~~g~~s~~~~~~~~~i----~~~g--~~~~~v~~~~~~~-~--------~~iD~d~Le~~l~~~--- 250 (419)
-+ ..+|+...-.|.|.. .+........ ...+ ..+..++++.... . ...+.+.+++.+.+.
T Consensus 150 ~tgr~~ii~~~~~yHG~t-~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~ 228 (464)
T PRK06938 150 ATGRSTVLSFQGGYHGMS-QGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLDDPESG 228 (464)
T ss_pred hhCCCeEEEECCccCCcc-HHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHHHHHHHHHhhccC
Confidence 23 357887765543331 1110000000 0000 0123333332100 0 012367788888642
Q ss_pred --CCeEEEEcCC--CCC----CcCChHHHHHHHHHhCCEEEEeccccccccccCCcC--CCCC-CCcEEEeCCCCcCC-C
Q 014724 251 --RPKLIIAGAS--AYP----RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLR-G 318 (419)
Q Consensus 251 --~pklIi~~~s--~~p----~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~--~~~~-~~Div~~S~hK~l~-G 318 (419)
++..||+..- +.+ ...-+++++++|++||+++|.||++ .|+.-.|... ..++ ..|+++. .|.++ |
T Consensus 229 ~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~-tGfGRtG~~~a~e~~gv~PDiv~~--gKglggG 305 (464)
T PRK06938 229 VVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQ-SGFGRTGKMFAFEHAGIIPDVVVL--SKAIGGS 305 (464)
T ss_pred CCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccc-cCCCcCcHHHHHHhcCCCCCEEEe--eccccCC
Confidence 3566776531 111 1223799999999999999999996 4542222110 1122 4688886 69884 4
Q ss_pred CCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHh
Q 014724 319 PRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE 392 (419)
Q Consensus 319 prgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~ 392 (419)
.+.|.+++++ ++ +.+.......+.++... ..++....|+.+.++ ...+++.+.-++|.+.|++
T Consensus 306 ~PlsAv~~~~------~~-~~~~~~~~~~T~~gnpl-a~Aaa~a~L~~l~~~---~l~~~~~~~G~~l~~~L~~ 368 (464)
T PRK06938 306 LPLAVVVYRE------WL-DTWQPGAHAGTFRGNQM-AMAAGSATLRYIKEH---RLAEHAAAMGERLREHLRQ 368 (464)
T ss_pred CceEEEeehh------Hh-hccCCCCCCCCCCcCHH-HHHHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHH
Confidence 4567777765 43 33322212222322222 232322345555432 3455666666777777765
No 367
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.61 E-value=1.5e-05 Score=82.40 Aligned_cols=250 Identities=11% Similarity=0.043 Sum_probs=130.2
Q ss_pred CChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHcc---
Q 014724 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 189 (419)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all--- 189 (419)
+-+|.|.+|+.+.+.+ ....... .+ .++ ..+ +..+++.++++...+ ...+.+||++|+..++....
T Consensus 70 h~~p~v~~Ai~~ql~~-~~~~~~~-~~--~~~--~~~--~lAe~L~~~~p~~~~---~v~f~~sGseAve~AlKlA~~~~ 138 (453)
T PRK06943 70 HANPRINAALKDQLDT-LEHAMLA-GC--THE--PAI--ELAERLAALTGGTLG---HAFFASDGASAVEIALKMSFHAW 138 (453)
T ss_pred CCCHHHHHHHHHHHHh-cCCcccc-cc--CCH--HHH--HHHHHHHHhCCCCCC---EEEEeCCCHHHHHHHHHHHHHHH
Confidence 3579999999888753 2111110 01 112 122 244667777653321 22566789999998886541
Q ss_pred ----CC-CCEEEEeCCCCCccccCcccccccccccccc------------ccEEEecccCCC--CC-------CCCHHHH
Q 014724 190 ----KP-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLDES--TG-------LVDYDML 243 (419)
Q Consensus 190 ----~p-GD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~------------~~~~v~~~~~~~--~~-------~iD~d~L 243 (419)
.+ ..+|+...-.|.|... + .++..+. .+..++++.... .. .-|++++
T Consensus 139 ~~rg~~~r~~Ii~~~~~yHG~t~-g------als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l 211 (453)
T PRK06943 139 RNRGRGDKREFVCLANGYHGETI-G------ALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAARALADV 211 (453)
T ss_pred HHhCCCCCCEEEEECCCcCCCcH-H------hhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHHHHHHHHH
Confidence 12 3578888765444210 1 0111110 112233221000 00 1235777
Q ss_pred HHHhhh--cCCeEEEEcCC--C-CC----CcCChHHHHHHHHHhCCEEEEeccccccccccCCcC--CCCC-CCcEEEeC
Q 014724 244 EKTAIL--FRPKLIIAGAS--A-YP----RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTT 311 (419)
Q Consensus 244 e~~l~~--~~pklIi~~~s--~-~p----~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~--~~~~-~~Div~~S 311 (419)
++.+.. .+...|++..- . .+ ...-+++++++|++||+++|.||++ .|+...|... ..+. ..|+++.
T Consensus 212 ~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~-TG~GRtG~~fa~~~~gv~PDivt~- 289 (453)
T PRK06943 212 RRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIA-VGCGRTGTFFACEQAGVWPDFLCL- 289 (453)
T ss_pred HHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechh-hCCCCCcchhHHHhCCCCCCeEee-
Confidence 777753 24566777641 2 12 1223799999999999999999996 4543222211 1122 4688886
Q ss_pred CCCcCC-C-CCeeEEEEeCCCcchhhHHHHhhhc----c--cCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHH
Q 014724 312 THKSLR-G-PRGGMIFFKKDPVLGVELESAINNA----V--FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNC 383 (419)
Q Consensus 312 ~hK~l~-G-prgG~i~~~~~~~~~~~l~~~i~~~----~--~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~ 383 (419)
.|.++ | .+.|.+++++ ++.+.+... . ...+.++ +....++....|+.+.++ ...+++.+.-
T Consensus 290 -gKgl~gG~~Pi~av~~~~------ei~~~~~~~~~~~~~~~~~T~~g-npl~~aaa~a~L~~i~~~---~l~~~~~~~G 358 (453)
T PRK06943 290 -SKGISGGYLPLSLVLSRD------AIFAAFYDDDVTRGFLHSHSYTG-NPLACRAALATLDLFAED---DVLARNARKS 358 (453)
T ss_pred -ehhhccCcccceEEEEcH------HHHHhhcccCccCCccCCCCCCC-CHHHHHHHHHHHHHHHhc---CHHHHHHHHH
Confidence 69884 4 2567777776 566555321 1 1112222 222233333345555433 3456666667
Q ss_pred HHHHHHHHhC
Q 014724 384 RALASRLVEL 393 (419)
Q Consensus 384 ~~l~~~L~~~ 393 (419)
++|.+.|+++
T Consensus 359 ~~l~~~L~~l 368 (453)
T PRK06943 359 ARLRAALAPL 368 (453)
T ss_pred HHHHHHHHHH
Confidence 7777777663
No 368
>PRK07036 hypothetical protein; Provisional
Probab=98.60 E-value=6.7e-06 Score=85.35 Aligned_cols=249 Identities=15% Similarity=0.013 Sum_probs=124.7
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHcc----
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all---- 189 (419)
-+|+|.+|+.+.+.. ....... ....++ .+....+++.+++....+ ...+.+||++|++.++....
T Consensus 68 ~~p~v~~Ai~~q~~~-~~~~~~~--~~~~~~----~~~~lae~L~~~~p~~~~---~v~f~~sGseAve~AlklAr~~~~ 137 (466)
T PRK07036 68 GREEMADAIADQARR-LPYYTPF--GDMTNA----PAAELAAKLAELAPGDLN---HVFLTTGGSTAVDSALRFVHYYFN 137 (466)
T ss_pred CCHHHHHHHHHHHHh-Ccccccc--cccCCH----HHHHHHHHHHHhCCCCcC---EEEEeCCchHHHHHHHHHHHHHHH
Confidence 478899998887753 2111110 001122 122234666676543222 22556789999998886431
Q ss_pred --C-C-CCEEEEeCCCCCccccCcccccccccccccc------------ccEEEecccCC-CCCCC--------CHHHHH
Q 014724 190 --K-P-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLDE-STGLV--------DYDMLE 244 (419)
Q Consensus 190 --~-p-GD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~------------~~~~v~~~~~~-~~~~i--------D~d~Le 244 (419)
. + ..+|+...-.|.|.. .+. ++..+. .+..++.+... ..... ..+.++
T Consensus 138 ~~g~t~r~~Ii~~~~~YHG~t-~~a------~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 210 (466)
T PRK07036 138 VRGRPAKKHIITRGDAYHGST-YLT------ASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFE 210 (466)
T ss_pred hcCCCCccEEEEEcCccCCcc-Hhh------hcccCCCcccccccCCCCCcEEecCCcccccccCCChHHHHHHHHHHHH
Confidence 1 2 257887765543321 110 111110 11222221100 00011 124455
Q ss_pred HHhhh---cCCeEEEEcCC--CCCCc----CChHHHHHHHHHhCCEEEEeccccccccccCC---cCCCCC-CCcEEEeC
Q 014724 245 KTAIL---FRPKLIIAGAS--AYPRD----FDYPRMRQIADAVGALLMMDMAHISGLVAASV---VADPFK-YCDVVTTT 311 (419)
Q Consensus 245 ~~l~~---~~pklIi~~~s--~~p~~----~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~---~~~~~~-~~Div~~S 311 (419)
+.+.. .++.+||+..- +.+.. .-+++|+++|++||+++|+||++ .|+.-.|. ....+. ..|+++.
T Consensus 211 ~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~-tGfGRtG~~~~~~~~~gv~PDivt~- 288 (466)
T PRK07036 211 DKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVV-TGFGRLGHFFASEAVFGIQPDIITF- 288 (466)
T ss_pred HHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeech-hCCCcCchhhhhhhhcCCCCCEEEE-
Confidence 55542 24567777642 11222 22799999999999999999997 34322221 111122 4688764
Q ss_pred CCCcCCCC--CeeEEEEeCCCcchhhHHHHhhhc-----c-cC-CCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHH
Q 014724 312 THKSLRGP--RGGMIFFKKDPVLGVELESAINNA-----V-FP-GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN 382 (419)
Q Consensus 312 ~hK~l~Gp--rgG~i~~~~~~~~~~~l~~~i~~~-----~-~~-~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n 382 (419)
.|.++|- +.|.+++++ ++.+.+... . .. .+.++ ++...++....|+.+.++ ...+++.+.
T Consensus 289 -gK~l~gG~~Pi~av~~~~------~i~~~~~~~~~~~~~~~~~~T~~g-npl~~aaa~a~Le~i~~~---~l~~~~~~~ 357 (466)
T PRK07036 289 -AKGLTSGYQPLGAVIISE------RLLDVISGPNAKGNVFTHGFTYSG-HPVACAAALKNIEIMERE---GLCEHVREV 357 (466)
T ss_pred -ccccccCccccEEEEEcH------HHHHHHhcccCcCcccccCCCCCC-CHHHHHHHHHHHHHHHhC---CHHHHHHHH
Confidence 7998542 456666776 566655321 1 11 12222 222333333356555433 356667777
Q ss_pred HHHHHHHHHh
Q 014724 383 CRALASRLVE 392 (419)
Q Consensus 383 ~~~l~~~L~~ 392 (419)
.++|.+.|++
T Consensus 358 g~~l~~~L~~ 367 (466)
T PRK07036 358 GPYFEERLAS 367 (466)
T ss_pred HHHHHHHHHH
Confidence 7788888865
No 369
>PRK07481 hypothetical protein; Provisional
Probab=98.59 E-value=9.4e-06 Score=83.89 Aligned_cols=257 Identities=14% Similarity=0.021 Sum_probs=123.9
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccC---
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--- 190 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~--- 190 (419)
-+|+|.+|+.+.+... ....... .+ .++ .+....+++.++++-.. .....+.+||++|++.++.....
T Consensus 59 ~~p~v~~Ai~~ql~~~-~~~~~~~-~~-~~~----~~~~lae~L~~~~~~~~--~~~v~f~~sGsEAve~AlklAr~~~~ 129 (449)
T PRK07481 59 NREEVKEAIVRQLDEL-EYYSTFD-GT-THP----RAIELSYELIDMFAPEG--MRRVFFSSGGSDSVETALKLARQYWK 129 (449)
T ss_pred CCHHHHHHHHHHHHhc-cceeccc-cc-CCH----HHHHHHHHHHHhcCCCC--CCEEEEcCchHHHHHHHHHHHHHHHH
Confidence 4788899988877532 1100000 01 112 11224466777763111 11225567899999988864421
Q ss_pred ----CC-CEEEEeCCCCCccccCccccccc--ccc--cc--ccccEEEecccCC-CCCC-CCHHHH--------HHHhh-
Q 014724 191 ----PH-DRIMGLDLPHGGHLSHGFMTPKR--RVS--GT--SIYFESMPYRLDE-STGL-VDYDML--------EKTAI- 248 (419)
Q Consensus 191 ----pG-D~Vl~~~~~~~g~~s~~~~~~~~--~i~--~~--g~~~~~v~~~~~~-~~~~-iD~d~L--------e~~l~- 248 (419)
+| .+|+...-.|.|.. .+...... ... .. ..++..++++... ..+. -|++.+ |+.+.
T Consensus 130 ~~g~~~r~~ii~~~~~yHG~t-~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~ 208 (449)
T PRK07481 130 VRGQPERTKFISLKQGYHGTH-FGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAF 208 (449)
T ss_pred hcCCCCCcEEEEECCCcCCcc-hhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHh
Confidence 33 57888775543321 11100000 000 00 0011222221100 0011 144443 44443
Q ss_pred --hcCCeEEEEcCC--CCCC----cCChHHHHHHHHHhCCEEEEeccccccccccCCc--CCCCC-CCcEEEeCCCCcCC
Q 014724 249 --LFRPKLIIAGAS--AYPR----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTTTHKSLR 317 (419)
Q Consensus 249 --~~~pklIi~~~s--~~p~----~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~--~~~~~-~~Div~~S~hK~l~ 317 (419)
..++.+|++..- +.+. ..-+++|+++|++||+++|.||++ .|+...|.. ...++ ..|+++. .|.++
T Consensus 209 ~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~-tGfGRtG~~~a~~~~gv~PDiv~~--gKgl~ 285 (449)
T PRK07481 209 QGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVV-TGFGRTGSWFGSRGWGVKPDIMCL--AKGIT 285 (449)
T ss_pred cCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehh-hCcCcCchhhHhhhcCCCCCEEEE--eeccc
Confidence 124567777642 1121 223799999999999999999996 454222211 01112 4688775 69985
Q ss_pred C--CCeeEEEEeCCCcchhhHHHHhhhc-------ccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHH
Q 014724 318 G--PRGGMIFFKKDPVLGVELESAINNA-------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALAS 388 (419)
Q Consensus 318 G--prgG~i~~~~~~~~~~~l~~~i~~~-------~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~ 388 (419)
| .+.|.+++++ ++.+.+... ....+.++ ++-..++....|+.+.++ ...+++.+.-++|.+
T Consensus 286 gG~~Pi~av~~~~------~i~~~~~~~~~~~~~~~h~~T~~g-npl~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~ 355 (449)
T PRK07481 286 SGYVPLGATMVNA------RIADAFEANADFGGAIMHGYTYSG-HPVACAAALATLDIVVRE---DLPANAAKRGAYLLE 355 (449)
T ss_pred CCCcCceEEEEcH------HHHHHHhccCccccccccCCCCCC-CHHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHH
Confidence 4 2566677776 566655421 11122222 222233333355555432 345666666777777
Q ss_pred HHHhC
Q 014724 389 RLVEL 393 (419)
Q Consensus 389 ~L~~~ 393 (419)
.|+++
T Consensus 356 ~L~~l 360 (449)
T PRK07481 356 GLQPL 360 (449)
T ss_pred HHHHH
Confidence 77663
No 370
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.58 E-value=1.1e-05 Score=83.87 Aligned_cols=249 Identities=13% Similarity=0.057 Sum_probs=127.9
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHcc----
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all---- 189 (419)
-+|.|.+|+.+.+.. ...... ..+. ++. .+ ...+++.+++....+ ...+.+||++|++.++....
T Consensus 64 ~~p~v~~Ai~~ql~~-l~~~~~-~~~~--~~~--~~--~lae~L~~~~p~~~~---~v~f~~sGsEAve~AlKlAr~~~~ 132 (466)
T PRK07030 64 ANPRINQRIKDQVDQ-LEHVIL-AGFS--HEP--VI--ELSERLVKITPPGLS---RCFYADNGSSAIEVALKMSFHYWR 132 (466)
T ss_pred CCHHHHHHHHHHHHh-cCCccc-cccC--CHH--HH--HHHHHHHHhCCCCcC---EEEEeCCcHHHHHHHHHHHHHHHH
Confidence 478899998887753 211111 0111 121 12 234667676642222 22566789999998886541
Q ss_pred ---CC-CCEEEEeCCCCCccccCcccccccccccccc------------ccEEEecccCC--CCC-------CCCHHHHH
Q 014724 190 ---KP-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLDE--STG-------LVDYDMLE 244 (419)
Q Consensus 190 ---~p-GD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~------------~~~~v~~~~~~--~~~-------~iD~d~Le 244 (419)
.+ ..+|+...-.|.|... + .++..+. .+..++++... ..+ .-+++.++
T Consensus 133 ~~g~t~r~~ii~~~~~yHG~t~-g------a~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~le 205 (466)
T PRK07030 133 NRGKPRKKRFVTLTNSYHGETL-A------AMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAHME 205 (466)
T ss_pred HhCCCCCcEEEEECCCcCcccH-H------HHhccCCccccccCCccCCCCEEcCCCCccccccCCCHHHHHHHHHHHHH
Confidence 12 3578877655433210 0 0111110 11222222100 000 11356677
Q ss_pred HHhhh--cCCeEEEEcC-C-C-CCC----cCChHHHHHHHHHhCCEEEEeccccccccccCCcC--CCCC-CCcEEEeCC
Q 014724 245 KTAIL--FRPKLIIAGA-S-A-YPR----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTT 312 (419)
Q Consensus 245 ~~l~~--~~pklIi~~~-s-~-~p~----~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~--~~~~-~~Div~~S~ 312 (419)
+.+.. .+..+||+.. . . .+. ..-+++|+++|++||+++|.||++ .|+...|... ..++ ..|+++.
T Consensus 206 ~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~-TGfGRtG~~~a~~~~gv~PDiv~~-- 282 (466)
T PRK07030 206 QTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIA-VGFGRTGTMFACEQAGIRPDFLCL-- 282 (466)
T ss_pred HHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehh-hCcCccccchHHHhcCCCCCEEee--
Confidence 77753 2455677664 1 1 222 223799999999999999999996 4542222110 1112 4688886
Q ss_pred CCcCC-C-CCeeEEEEeCCCcchhhHHHHhhhc-------ccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHH
Q 014724 313 HKSLR-G-PRGGMIFFKKDPVLGVELESAINNA-------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNC 383 (419)
Q Consensus 313 hK~l~-G-prgG~i~~~~~~~~~~~l~~~i~~~-------~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~ 383 (419)
.|.++ | .+.|.+++++ ++.+.+... ....+.++ ++-..++....|+.+.++ ...++..+.-
T Consensus 283 gKgl~gG~~Pi~av~~~~------ei~~~~~~~~~~~~~~~h~~T~~g-npla~aaa~a~L~~i~~~---~l~~~~~~~G 352 (466)
T PRK07030 283 SKALTGGYLPLAAVLTTD------TVYQAFYDDYPTLRAFLHSHSYTG-NPLACAAALATLDIFEQD---NVIENNRALA 352 (466)
T ss_pred ehhccCCcccceEEEecH------HHHHHHhcccccccccccCCCCCC-CHHHHHHHHHHHHHHHhc---CHHHHHHHHH
Confidence 69884 4 2567777777 566554321 11122222 222233333356665433 3456666667
Q ss_pred HHHHHHHHhC
Q 014724 384 RALASRLVEL 393 (419)
Q Consensus 384 ~~l~~~L~~~ 393 (419)
++|.+.|+++
T Consensus 353 ~~l~~~L~~l 362 (466)
T PRK07030 353 RRMAEATAHL 362 (466)
T ss_pred HHHHHHHHHH
Confidence 7777777663
No 371
>PRK06917 hypothetical protein; Provisional
Probab=98.58 E-value=6.8e-06 Score=84.86 Aligned_cols=250 Identities=15% Similarity=0.084 Sum_probs=130.6
Q ss_pred CChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHcc---
Q 014724 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 189 (419)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all--- 189 (419)
+-+|.|.+|+.+.+.. ....+.. . +. ++ .+.+..+++.+++....+ + ..+.+||++|++.++....
T Consensus 47 h~hp~v~~Ai~~ql~~-~~~~~~~-~-~~-~~----~~~~lae~L~~~~p~~~~-~--v~f~~sGsEAve~AlklAr~~~ 115 (447)
T PRK06917 47 HGVKEIADAIKEQAEE-VSFVYRS-Q-FT-SE----PAEKLAKKLSDLSPGDLN-W--SFFVNSGSEANETAMKIAIQHF 115 (447)
T ss_pred CCCHHHHHHHHHHHhh-CcCcccc-c-cC-CH----HHHHHHHHHHHhCCCCCC-E--EEEeCChHHHHHHHHHHHHHHH
Confidence 3479999999888754 2211111 1 11 12 222344677777643322 2 2566899999998886541
Q ss_pred ----CCC-CEEEEeCCCCCccccCcccccccccccccc------------ccEEEecccCC-----CC-C---CCCHHHH
Q 014724 190 ----KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLDE-----ST-G---LVDYDML 243 (419)
Q Consensus 190 ----~pG-D~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~------------~~~~v~~~~~~-----~~-~---~iD~d~L 243 (419)
.+| .+|+...-.|.|.. .+. +...+. .+..++++... ++ . .-|++.+
T Consensus 116 ~~rg~t~r~~ii~~~~~yHG~t-~~a------ls~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l 188 (447)
T PRK06917 116 QERGIQGKHKILSRWMSYHGIT-MGA------LSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATEL 188 (447)
T ss_pred HhcCCCCCCEEEEECCCcCCcc-HHH------HHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHH
Confidence 133 57888765543331 110 111110 01112211100 00 0 1134677
Q ss_pred HHHhhhc---CCeEEEEcCCC--CC-----CcCChHHHHHHHHHhCCEEEEeccccccccccCCcC--CCCC-CCcEEEe
Q 014724 244 EKTAILF---RPKLIIAGASA--YP-----RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTT 310 (419)
Q Consensus 244 e~~l~~~---~pklIi~~~s~--~p-----~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~--~~~~-~~Div~~ 310 (419)
++.++.+ +...||+..-. .+ ...-+++|+++|++||+++|+||++. |+...|... ..++ ..|+++
T Consensus 189 e~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~t-GfGRtG~~~a~~~~gv~PDi~~- 266 (447)
T PRK06917 189 ETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMT-GLGRTGAMFAMEHWGVEPDIMT- 266 (447)
T ss_pred HHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhh-CcCcccchhhHHhcCCCCCEEE-
Confidence 7777643 35667776421 11 12237899999999999999999974 642222210 1122 458765
Q ss_pred CCCCcCCC-C-CeeEEEEeCCCcchhhHHHHhhhc---cc-CCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHH
Q 014724 311 TTHKSLRG-P-RGGMIFFKKDPVLGVELESAINNA---VF-PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCR 384 (419)
Q Consensus 311 S~hK~l~G-p-rgG~i~~~~~~~~~~~l~~~i~~~---~~-~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~ 384 (419)
+.|.++| . +.|.+++++ ++.+.+... .+ ..+.++. +...++....++.+.++ ...+++.+.-+
T Consensus 267 -~gK~l~~G~~Pi~a~~~~~------~i~~~~~~~~~~~~~~~T~~gn-pl~~aaa~a~l~~l~~~---~l~~~~~~~g~ 335 (447)
T PRK06917 267 -LGKGLGAGYTPIAATVVSD------RVMEPILRGSRSIMSGHTLSAN-PLSAATALAVLEYMEKH---NLPEKAAEKGE 335 (447)
T ss_pred -eeehhccCCcceEEEEEcH------HHHHHHhccCcccccccCCCCC-HHHHHHHHHHHHHHHHC---CHHHHHHHHHH
Confidence 4799954 2 567777776 566555321 11 1222222 22333333356555432 34566777777
Q ss_pred HHHHHHHhC
Q 014724 385 ALASRLVEL 393 (419)
Q Consensus 385 ~l~~~L~~~ 393 (419)
+|.+.|+++
T Consensus 336 ~l~~~L~~l 344 (447)
T PRK06917 336 YLIKGLQKV 344 (447)
T ss_pred HHHHHHHHH
Confidence 788777663
No 372
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=98.57 E-value=3.1e-06 Score=82.88 Aligned_cols=112 Identities=22% Similarity=0.270 Sum_probs=69.5
Q ss_pred ChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--C--CcEEEeCCCCcC-CCCCeeEEEEeCCCcchhhHHHHhh
Q 014724 267 DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--Y--CDVVTTTTHKSL-RGPRGGMIFFKKDPVLGVELESAIN 341 (419)
Q Consensus 267 dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~--~Div~~S~hK~l-~GprgG~i~~~~~~~~~~~l~~~i~ 341 (419)
-++++.++|+++|.++|.|++| .|+...| .-.-|+ + .||+ |+.|++ .|...|.+++.+ ++.+.++
T Consensus 234 Ylka~~~~v~k~Ggl~IaDEVq-tGfGRtG-~~wgfe~h~v~PDIv--TmAKgiGnG~Pl~AVvtt~------EIa~v~~ 303 (442)
T KOG1404|consen 234 YLKAAYKVVRKRGGLFIADEVQ-TGFGRTG-HMWGFESHGVVPDIV--TMAKGIGNGFPLGAVVTTP------EIADVLN 303 (442)
T ss_pred HHHHHHHHHHHcCCEEEehhhh-hcccccc-ccccccccCCCccHH--HHHhhccCCCcceeeecCH------HHHHHHH
Confidence 4799999999999999999997 4654444 222344 2 3665 467998 555667777777 6777776
Q ss_pred hcc--cCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC
Q 014724 342 NAV--FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL 393 (419)
Q Consensus 342 ~~~--~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~ 393 (419)
+.. |..++|.| +...++++ .|+-+.+ ++.+++..+.-.+|.+.|.+.
T Consensus 304 ~~~~~fnTyggnP-~a~avg~a-VL~Vike---e~LqE~aa~vG~yl~~~l~~l 352 (442)
T KOG1404|consen 304 QKSSHFNTYGGNP-VACAVGLA-VLKVIKE---ENLQENAAEVGSYLLEKLAAL 352 (442)
T ss_pred hccccccccCCCc-hhHHHHHH-HHHHHHH---HhHHHHHHHHHHHHHHHHHHH
Confidence 654 33333444 33333333 3544442 344555555567777777663
No 373
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=98.55 E-value=2.5e-06 Score=83.24 Aligned_cols=263 Identities=13% Similarity=0.138 Sum_probs=148.3
Q ss_pred hcccccccCCCChHHHHHHHhhhhhccCCCCCC-CCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHH
Q 014724 103 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLP-GKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPAN 181 (419)
Q Consensus 103 ~~i~L~~sen~~~~~V~eal~~~l~~~y~~g~p-~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~ 181 (419)
...++.+|+.-+|++|++.....+.+....|.+ ..+-..+.++...++ .+++.+.++++++.+ +.+.+...++|...
T Consensus 5 ~~~nFsaGPa~lp~~vL~~a~~e~~~~~g~g~svme~SHRsk~~~~v~~-~a~~~lreLl~iPd~-Y~VlflqGGat~qf 82 (365)
T COG1932 5 RVYNFSAGPAALPPEVLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLE-EAEKDLRELLNIPDD-YKVLFLQGGATGQF 82 (365)
T ss_pred CCCCCCCCcccCCHHHHHHHHHHHhhhccCCcceeeeccccHHHHHHHH-HHHHHHHHHhCCCCC-ceEEEEcCccHHHH
Confidence 456788899889999999988877654433332 111223444445555 466889999999974 44544445557888
Q ss_pred HHHHHHccCCCCE--EEEeCCCCCccccCccccccccccccccccEEEecccCC--CCCCCCHHHHHHHhhhcCCeEEEE
Q 014724 182 FEVYTAILKPHDR--IMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE--STGLVDYDMLEKTAILFRPKLIIA 257 (419)
Q Consensus 182 ~~~~~all~pGD~--Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~--~~~~iD~d~Le~~l~~~~pklIi~ 257 (419)
.++...|+..+.. |... +++.-.+ +-+...+............ -+..+|++... +. .+...|.+
T Consensus 83 ~~~p~nLl~~~~~~yv~~g------~Ws~~a~---~eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~-~~~ayv~~ 150 (365)
T COG1932 83 AMAPMNLLGKRGTDYVDTG------AWSEFAI---KEAKKVGKQPKLIDARIEEAGYGSIPDLSKWD--FS-DNDAYVHF 150 (365)
T ss_pred HHHHHhhhcccCceeEeee------ehhHhHH---HHHHHhcccccccccceeccCccCCCChhhcc--cC-CCccEEEE
Confidence 8999999876543 3322 2211000 1111112100111100000 12245555433 22 12333555
Q ss_pred cCCC--CCCcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCCCCcEEEeCCCCcCCCCCe-eEEEEeCCCcchh
Q 014724 258 GASA--YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGV 334 (419)
Q Consensus 258 ~~s~--~p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~~~Div~~S~hK~l~Gprg-G~i~~~~~~~~~~ 334 (419)
+..+ .+...+ ..-.+.. +.++++|++ +++... +.++..-|++.++.+|.+ ||.| ++++.++
T Consensus 151 ~~NeTi~Gv~v~--~~p~~~~--~~~~v~D~S--S~ilsr---~iDvsk~dviyagaQKnl-GpaGltvvIvr~------ 214 (365)
T COG1932 151 CWNETISGVEVP--ELPDIGS--DGLLVADAS--SAILSR---PIDVSKYDVIYAGAQKNL-GPAGLTVVIVRP------ 214 (365)
T ss_pred ecCCcccceEcc--CCCCCCC--CceEEEecc--cHHhcC---CCChhHcceEEEehhhcc-CccceEEEEEcH------
Confidence 4322 232222 2212222 278999997 343321 122336799999999998 6777 7777787
Q ss_pred hHHHHhhhcccC------------CCCCCChHHHHHHHHHHHHHhcCh-HHHHHHHHHHHHHHHHHHHHHhCCc
Q 014724 335 ELESAINNAVFP------------GLQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVELGY 395 (419)
Q Consensus 335 ~l~~~i~~~~~~------------~~~g~p~~~~iaala~al~~~~~~-~~~~~~~~v~~n~~~l~~~L~~~G~ 395 (419)
++.+++.....| .+..+|.+..+.-+...++-++.. +++...++-.++++.|++.+.+.+|
T Consensus 215 ~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s~f 288 (365)
T COG1932 215 DLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKSDF 288 (365)
T ss_pred HHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 455555433111 123566666655555566665533 4588889999999999999999876
No 374
>PRK07483 hypothetical protein; Provisional
Probab=98.55 E-value=8e-06 Score=84.24 Aligned_cols=249 Identities=16% Similarity=0.092 Sum_probs=125.3
Q ss_pred CChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccC--
Q 014724 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK-- 190 (419)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~-- 190 (419)
+-+|.|.+++.+.+.+.. .-.++ .+ .++.. ....+++.+++....+ ...+.+||++|+..++.....
T Consensus 46 h~~p~v~~av~~ql~~~~-~~~~~--~~-~~~~~----~~lae~L~~~~p~~~~---~v~f~~sGsEAve~AlklAr~~~ 114 (443)
T PRK07483 46 HSHPRVIAAIHAQIDRLA-YAHTS--FF-TTEPA----EALADRLVAAAPAGLE---HVYFVSGGSEAVEAALKLARQYF 114 (443)
T ss_pred CCCHHHHHHHHHHHHhcc-Ccccc--cc-CCHHH----HHHHHHHHHhCCCCCC---EEEEcCCcHHHHHHHHHHHHHHH
Confidence 347889998888876421 00111 11 12211 2234667776642222 225677899999988754321
Q ss_pred -----CC-CEEEEeCCCCCccccCcccccccccccccc------------ccEEEecccCCCCC--CC--------CHHH
Q 014724 191 -----PH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLDESTG--LV--------DYDM 242 (419)
Q Consensus 191 -----pG-D~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~------------~~~~v~~~~~~~~~--~i--------D~d~ 242 (419)
+| .+|+...-.|.|... +. ++.++. .+..++++....+. .. .+++
T Consensus 115 ~~~g~~~r~~Ii~~~~~YHG~t~-~a------~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (443)
T PRK07483 115 VEIGQPQRRHFIARRQSYHGNTL-GA------LAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDEAYGQRLADE 187 (443)
T ss_pred HhcCCCCCcEEEEECCCcCCcCH-HH------hhhcCCcccccccCCCCCCCEEeCCCccccccccCCCHHHHHHHHHHH
Confidence 33 468877655444311 10 111110 01222211000000 00 1256
Q ss_pred HHHHhhh---cCCeEEEEcCCC--C-C----CcCChHHHHHHHHHhCCEEEEeccccccccccCCcC--CCCC-CCcEEE
Q 014724 243 LEKTAIL---FRPKLIIAGASA--Y-P----RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVT 309 (419)
Q Consensus 243 Le~~l~~---~~pklIi~~~s~--~-p----~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~--~~~~-~~Div~ 309 (419)
+++.+.. .+..+|++..-. . + ...-+++|+++|++||+++|.||++. |+.-.|... .-+. ..|+++
T Consensus 188 l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~t-GfGRtG~~~a~~~~gv~PDiv~ 266 (443)
T PRK07483 188 LEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMC-GMGRTGTLFACEEDGVAPDLVT 266 (443)
T ss_pred HHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEeccee-CcccCcHHHHHhhcCCCCCeee
Confidence 6665542 234567765321 1 2 12237999999999999999999963 543222111 1112 468887
Q ss_pred eCCCCcCC-CC-CeeEEEEeCCCcchhhHHHHhhhcc----cCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHH
Q 014724 310 TTTHKSLR-GP-RGGMIFFKKDPVLGVELESAINNAV----FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNC 383 (419)
Q Consensus 310 ~S~hK~l~-Gp-rgG~i~~~~~~~~~~~l~~~i~~~~----~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~ 383 (419)
. .|.++ |. +.|.+++++ ++.+.+.... ...+.++ +....++....++.+.++ ...+++.+..
T Consensus 267 ~--gK~l~gG~~Pi~av~~~~------~i~~~~~~~~~~~~h~~T~~g-npl~~aaa~a~l~~i~~~---~l~~~~~~~g 334 (443)
T PRK07483 267 I--AKGLGAGYQPIGAVLASD------RIYDAIADGSGFFQHGHTYLG-HATACAAALAVQRVIAED---GLLANVRARG 334 (443)
T ss_pred e--hhhhccCccccEEEEEcH------HHHHHHhcCCCccccCCCCCC-CHHHHHHHHHHHHHHHhc---CHHHHHHHHH
Confidence 5 69984 42 567777776 5655554221 1122222 222233323345555433 3456666667
Q ss_pred HHHHHHHHh
Q 014724 384 RALASRLVE 392 (419)
Q Consensus 384 ~~l~~~L~~ 392 (419)
++|.+.|++
T Consensus 335 ~~l~~~L~~ 343 (443)
T PRK07483 335 EQLRARLRE 343 (443)
T ss_pred HHHHHHHHH
Confidence 777777765
No 375
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=98.49 E-value=3.7e-05 Score=79.68 Aligned_cols=254 Identities=16% Similarity=0.133 Sum_probs=119.6
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEec-CChHHHHHHHHHHcc--C
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQP-LSGSPANFEVYTAIL--K 190 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~-~sGt~A~~~~~~all--~ 190 (419)
-+|.|.+|+.+.+......... .+ .++ .+....+++.+++....... ..+++ +||++|++.++.... .
T Consensus 75 ~~p~v~~Ai~~q~~~~~~~~~~---~~-~~~----~~~~lAe~L~~~~p~~~~~~-~~~f~~~SGsEAve~AlklAr~~t 145 (459)
T PRK06931 75 NHPDVLQSIQDVLTSGLPLHTL---DL-TTP----LKDAFSEYLLSLLPGQGKEY-CLQFTGPSGADAVEAAIKLAKTYT 145 (459)
T ss_pred CCHHHHHHHHHHHhhhcccccc---cc-CCH----HHHHHHHHHHHhCCCccccc-eEEEeCCCcHHHHHHHHHHHHHhc
Confidence 4789999998877532111000 11 112 22234466777764221000 12344 699999998886442 2
Q ss_pred CCCEEEEeCCCCCccccCcccccc------ccccccccccEEEecccCCCCC------CCCHHHH----HHHhhh-----
Q 014724 191 PHDRIMGLDLPHGGHLSHGFMTPK------RRVSGTSIYFESMPYRLDESTG------LVDYDML----EKTAIL----- 249 (419)
Q Consensus 191 pGD~Vl~~~~~~~g~~s~~~~~~~------~~i~~~g~~~~~v~~~~~~~~~------~iD~d~L----e~~l~~----- 249 (419)
..++|+...-.|.|... +..... +...-...++..++++.. ... .-|.+.+ ++.+.+
T Consensus 146 gr~~Ii~~~~~yHG~t~-~als~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (459)
T PRK06931 146 GRSNVISFSGGYHGMTH-GALAVTGNLSPKNAVNGLMPGVQFMPYPHE-YRCPLGIGGEAGVKALTYYFENFIEDVESGV 223 (459)
T ss_pred CCCeEEEECCCcCCccH-HHHhhcCCcccccCCCCCCCCcEEeCCCcc-ccccccCCchhHHHHHHHHHHHHHHhhhcCC
Confidence 34578877665544321 110000 000000011222332210 000 0123333 333321
Q ss_pred cCCeEEEEcCC--CCC----CcCChHHHHHHHHHhCCEEEEeccccccccccCCcC--CCCC-CCcEEEeCCCCcC-CCC
Q 014724 250 FRPKLIIAGAS--AYP----RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSL-RGP 319 (419)
Q Consensus 250 ~~pklIi~~~s--~~p----~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~--~~~~-~~Div~~S~hK~l-~Gp 319 (419)
.+...||+..- +.+ ...-+++++++|++||+++|.||++ .|+.-.|... ..+. ..|+++. .|.+ .|.
T Consensus 224 ~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~-tGfGRtG~~~a~~~~gv~PDivt~--gK~l~gG~ 300 (459)
T PRK06931 224 RKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQ-AGFARTGKMFAFEHAGIEPDIIVM--SKAVGGGL 300 (459)
T ss_pred CceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecch-hcCCcCchHHHhhhcCCCCCEEEe--cccccCCc
Confidence 13456776431 111 1223799999999999999999996 4542222110 1112 4688775 6988 444
Q ss_pred CeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHh
Q 014724 320 RGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE 392 (419)
Q Consensus 320 rgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~ 392 (419)
+.|.+..++ ++ +.+.......+.++ ++...++....|+.+.+++ ..+++.+.-++|.+.|++
T Consensus 301 Pi~av~~~~------~~-~~~~~~~~~~T~~g-npla~aaala~L~~l~~~~---l~~~~~~~G~~l~~~L~~ 362 (459)
T PRK06931 301 PLAVLGIKK------EF-DAWQPGGHTGTFRG-NQLAMATGLTTLKILKEEN---LAQNAAERGEWLKAQLAE 362 (459)
T ss_pred ceeeeeeHH------HH-hhccCCCCCCCCCC-CHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHH
Confidence 556666665 33 33322222222222 2222333233455554333 345555556666666655
No 376
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.46 E-value=4.2e-05 Score=79.50 Aligned_cols=204 Identities=16% Similarity=0.089 Sum_probs=104.9
Q ss_pred CChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCC--CCCceeEecCChHHHHHHHHHHccC
Q 014724 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDE--NKWGVNVQPLSGSPANFEVYTAILK 190 (419)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~--~~~~v~V~~~sGt~A~~~~~~all~ 190 (419)
+-+|.|.+|+.+.+.. ....... . +. ++. ...+.+++.+++.-.. ....-..+.+||++|+..++.....
T Consensus 80 h~~p~i~~Ai~~q~~~-l~~~~~~-~-~~-~~~----~~~lae~L~~~~p~~~~~~~~~~v~f~~sGSEAvE~AlKlAr~ 151 (472)
T PRK08742 80 HAEPRIGAAIAAQAGE-LEQVMLA-G-FT-HEP----AVQLAEQLLAIAPRQDGRAPLSKVFYADNGSAGVEVALKMAFH 151 (472)
T ss_pred CCCHHHHHHHHHHHHh-CCCcccc-c-cC-CHH----HHHHHHHHHHhCCCcccCCCCCEEEEeCCchHHHHHHHHHHHH
Confidence 3578999998887642 2111110 0 11 121 1123466666663210 0011225667899999988865421
Q ss_pred -------C-CCEEEEeCCCCCccccCcccccccccccccc------------ccEEEecccC----CCC-----CCCCHH
Q 014724 191 -------P-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLD----EST-----GLVDYD 241 (419)
Q Consensus 191 -------p-GD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~------------~~~~v~~~~~----~~~-----~~iD~d 241 (419)
+ ..+|+...-.|.|.. .+. ++..+. .+..++++.. ... ...+++
T Consensus 152 ~~~~~g~~~r~~ii~~~~syHG~t-~ga------ls~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 224 (472)
T PRK08742 152 YFHNRGEHRRTRFIALENGYHGET-IGA------LAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYALQAAD 224 (472)
T ss_pred HHHhcCCCCCcEEEEECCCcCCCc-hhh------hhccCCcccccccCCCCCCCEEeCCCCccccccCCCHHHHHHHHHH
Confidence 2 257888876654431 111 111111 0112222110 000 011356
Q ss_pred HHHHHhhh--cCCeEEEEcCC---CCCC----cCChHHHHHHHHHhCCEEEEeccccccccccCCcC--CCCC-CCcEEE
Q 014724 242 MLEKTAIL--FRPKLIIAGAS---AYPR----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVT 309 (419)
Q Consensus 242 ~Le~~l~~--~~pklIi~~~s---~~p~----~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~--~~~~-~~Div~ 309 (419)
.+++.+.. .+...||+... +.+. ..-+++++++|++||+++|.||++ .|+...|... ..++ ..|+++
T Consensus 225 ~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~-TGfGRtG~~~a~e~~gv~PDiv~ 303 (472)
T PRK08742 225 ALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIA-TGFGRTGTLFACEQAGVMPDLLC 303 (472)
T ss_pred HHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechh-hCCCCCccchHHHhcCCCCCEEE
Confidence 77777753 24556776641 2222 223799999999999999999996 4443222211 0111 468888
Q ss_pred eCCCCcCC-CC-CeeEEEEeCCCcchhhHHHHh
Q 014724 310 TTTHKSLR-GP-RGGMIFFKKDPVLGVELESAI 340 (419)
Q Consensus 310 ~S~hK~l~-Gp-rgG~i~~~~~~~~~~~l~~~i 340 (419)
. .|.++ |. +.|.+++++ ++.+.+
T Consensus 304 ~--gKgl~gG~~Plaav~~~~------ei~~~~ 328 (472)
T PRK08742 304 L--SKGLTGGFLPLSAVLATQ------QLYDAF 328 (472)
T ss_pred E--cccccCCCCCcceeeccH------HHHHHh
Confidence 6 69984 42 456666676 565544
No 377
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.43 E-value=1.5e-06 Score=86.15 Aligned_cols=255 Identities=16% Similarity=0.172 Sum_probs=133.9
Q ss_pred CchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHcc--CCCCEEEEeCCCCCccccCcccccccccc
Q 014724 141 GGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--KPHDRIMGLDLPHGGHLSHGFMTPKRRVS 218 (419)
Q Consensus 141 ~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all--~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~ 218 (419)
.|......|-.....-+.+..|+....- +.++|..--..+.+.+.++- ..++.|+.+...|.+ +.+.+.
T Consensus 49 ~Gss~~~~ltn~l~~d~~~~~G~~~~~~-~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkS--------c~kai~ 119 (389)
T PF05889_consen 49 AGSSLLAKLTNSLVLDALRLAGLRSVKS-CFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKS--------CFKAIE 119 (389)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTHTTHCE-EEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHH--------HHHHHH
T ss_pred cCcHHHHHHHHHHHHHHHHHcCCccccc-eEEEecccccHHHHHHHHHhcccCCceEEEeeccccc--------hHHHHH
Confidence 4544444444433344556678875321 33444332235555666663 457788877655432 225566
Q ss_pred ccccccEEEecccCCCCCCCCHHHHHHHhhhcC--CeEEEEcCC--CCCCcCC-hHHHHHHHHHhCCEEEEecccccccc
Q 014724 219 GTSIYFESMPYRLDESTGLVDYDMLEKTAILFR--PKLIIAGAS--AYPRDFD-YPRMRQIADAVGALLMMDMAHISGLV 293 (419)
Q Consensus 219 ~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~--pklIi~~~s--~~p~~~d-l~~I~~ia~~~ga~livD~ah~~Gl~ 293 (419)
..|....+++-..+++.-..|.+.+|+.+++.. +.+.++.++ .+|+..| +++|++||++||+..++-.|+..-..
T Consensus 120 ~AGl~~~vV~~~~~~d~l~td~~~ie~~i~~~G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~ 199 (389)
T PF05889_consen 120 RAGLEPVVVENVLEGDELITDLEAIEAKIEELGADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQSS 199 (389)
T ss_dssp HTT-EEEEE-EEEETTEEEEHHHHHHHHHHHHCGGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-H
T ss_pred hcCCeEEEeeccCCCCeeeccHHHHHHHHHHhCCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhHH
Confidence 677655555532232334678899999987643 345455443 3577666 99999999999999999999644100
Q ss_pred cc-CCcCCC--CCCCcEEEeCCCCcCCCCCeeEEEEeCCCcchhhHHHHhhhcccCC-CCCCChHHHHHHHHHHHHHhcC
Q 014724 294 AA-SVVADP--FKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPG-LQGGPHNHTIGGLAVCLKHAQS 369 (419)
Q Consensus 294 ~~-g~~~~~--~~~~Div~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~-~~g~p~~~~iaala~al~~~~~ 369 (419)
.. ..+... ....|+++-|+-|.|-.|-||.+++.... .....+... +|+ ...+|....+ .-|..+..
T Consensus 200 ~~~~~i~~a~~~GRvda~vqS~dkNF~VPvGgai~As~~~----~~i~~vs~~-YpGRas~sp~ld~~----itLl~LG~ 270 (389)
T PF05889_consen 200 KCMHLIQQAWRVGRVDAFVQSTDKNFMVPVGGAIMASFDP----SGILAVSKE-YPGRASASPSLDLF----ITLLSLGC 270 (389)
T ss_dssp HHHHHHHHHHHHSTCSEEEEEHHHHHCEESSHEEEEESSH----HHHHHHHHT-SHSHBTSHHHHHHH----HHHHHHHH
T ss_pred HHHHHHHHHHhcCCcceeeeecCCCEEecCCCcEEEecCH----HHHHHHHHH-hhhhhhcccchHHH----HHHHHHhh
Confidence 00 000000 01469999999999988888666555431 566666553 333 2223333221 12222222
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHh----CCcEEecCCCccee-EEEEeCCc
Q 014724 370 PEFKVYQNKVVSNCRALASRLVE----LGYKLVSGGSDNHL-VLVDLRPM 414 (419)
Q Consensus 370 ~~~~~~~~~v~~n~~~l~~~L~~----~G~~v~~~~t~~hl-v~vd~~~~ 414 (419)
.++.....+..++..++.+.|++ .|-.+. ....||+ +-+++..+
T Consensus 271 ~g~~~ll~~r~~~f~~l~erl~~~aee~~e~ll-~~p~N~is~a~tl~~l 319 (389)
T PF05889_consen 271 TGYGALLKERKASFPYLKERLKKWAEEVGERLL-ETPRNHISMAFTLDTL 319 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEBS-SSTT-SSEEEEE-TTC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc-CCCCCCeeEEEECccc
Confidence 34556666666666666666654 463333 3346774 44565543
No 378
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.35 E-value=4.5e-05 Score=83.77 Aligned_cols=218 Identities=17% Similarity=0.074 Sum_probs=121.4
Q ss_pred HHHHHHHHcCCCCCCCceeEecC-ChHHHHHHHHHHc-cC--CCCEEEEeCCCCCccccCccccccccccccccccEEEe
Q 014724 153 CQKRALAAFNLDENKWGVNVQPL-SGSPANFEVYTAI-LK--PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMP 228 (419)
Q Consensus 153 ~~~~la~~~g~~~~~~~v~V~~~-sGt~A~~~~~~al-l~--pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~ 228 (419)
.|..++++.|++-. |-... .+|.+-++++++. .. +..+|++++-.|..+...- +. ...+.+++++.
T Consensus 129 ~Qtmi~~LtGm~va----NASl~D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~----~t--~~~~~g~~i~~ 198 (954)
T PRK12566 129 FQQMTIDLTGLDLA----NASLLDEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVL----RT--RAEGFGFELVV 198 (954)
T ss_pred HHHHHHHHhCchhh----hhhhccchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHH----HH--hhhcCCcEEEE
Confidence 56789999999863 22222 2343333333333 12 2467888765553322100 00 11122233332
Q ss_pred cccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC-CCcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC-CCc
Q 014724 229 YRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY-PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCD 306 (419)
Q Consensus 229 ~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~-p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~-~~D 306 (419)
+++++.+.+ ++..|++.+|++ +...|+++|.+++|++|++++ +.+. ...-+.+..|-+ |+|
T Consensus 199 ------------~~~~~~~~~-~~~~v~vq~P~~~G~i~d~~~i~~~~h~~gal~~-~~~d---~laL~ll~~Pge~GAD 261 (954)
T PRK12566 199 ------------DAVDNLAAH-AVFGALLQYPDTHGEIRDLRPLIDQLHGQQALAC-VAAD---LLSLLVLTPPGELGAD 261 (954)
T ss_pred ------------cchhhcCCC-CEEEEEEECCCCceEEccHHHHHHHHHHcCCEEE-EEeC---HHHHhCCCChhhcCCc
Confidence 334444433 566788877774 567799999999999999866 3332 222223334444 899
Q ss_pred EEEeCCCC-----cCCCCCeeEEEEeCCCc---c-------------------hhhHHHHhhhcccCCCCCCChHHHHHH
Q 014724 307 VVTTTTHK-----SLRGPRGGMIFFKKDPV---L-------------------GVELESAINNAVFPGLQGGPHNHTIGG 359 (419)
Q Consensus 307 iv~~S~hK-----~l~GprgG~i~~~~~~~---~-------------------~~~l~~~i~~~~~~~~~g~p~~~~iaa 359 (419)
|++++.+- +|+||..||+.++++.. + +..-++.|+.-.-.. .--.+..+.|
T Consensus 262 I~vG~~Q~fGvp~~~GGP~ag~~a~~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtS--NICT~qaL~A 339 (954)
T PRK12566 262 VVLGSTQRFGVPMGYGGPHAAYFACRDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANS--NICTAQVLLA 339 (954)
T ss_pred EEeeCCCcCCCCCCCCCCCeeeeeehHHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccc--hhhHHHHHHH
Confidence 99887653 46899999999987410 0 011122333211110 0001122333
Q ss_pred HHHHH--HHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEec
Q 014724 360 LAVCL--KHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS 399 (419)
Q Consensus 360 la~al--~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~ 399 (419)
+..++ .....+++++..+++..++.+|++.|.+.|+++..
T Consensus 340 ~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~~g~~~~~ 381 (954)
T PRK12566 340 NIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEAKGIKRLN 381 (954)
T ss_pred HHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCcccc
Confidence 33232 12223457888899999999999999999998764
No 379
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=98.34 E-value=7.9e-05 Score=75.72 Aligned_cols=138 Identities=20% Similarity=0.183 Sum_probs=77.8
Q ss_pred CHHHHHHHhhhcCC---eEEEEcC---CCCCC----cCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC-----
Q 014724 239 DYDMLEKTAILFRP---KLIIAGA---SAYPR----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----- 303 (419)
Q Consensus 239 D~d~Le~~l~~~~p---klIi~~~---s~~p~----~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~----- 303 (419)
+.++||+++.++.| .++|+.. ..-+. ..-++++++||++||+++|.||+ ..|..-.|. .|.
T Consensus 199 ~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV-~tGFGRTG~---~FA~e~~g 274 (449)
T COG0161 199 AADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEV-ATGFGRTGK---MFACEHAG 274 (449)
T ss_pred HHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecc-eeCCCcCch---hhhhhhcC
Confidence 36788888887554 3455432 11121 23479999999999999999998 566543332 221
Q ss_pred -CCcEEEeCCCCcCCCC--CeeEEEEeCCCcchhhHHHHhhhc----ccCCCCCCChHHHHHHHHH-HHHHhcChHHHHH
Q 014724 304 -YCDVVTTTTHKSLRGP--RGGMIFFKKDPVLGVELESAINNA----VFPGLQGGPHNHTIGGLAV-CLKHAQSPEFKVY 375 (419)
Q Consensus 304 -~~Div~~S~hK~l~Gp--rgG~i~~~~~~~~~~~l~~~i~~~----~~~~~~g~p~~~~iaala~-al~~~~~~~~~~~ 375 (419)
-.|+++. .|.++|- +.|.+++++ ++.+.+... .+-+..-+.|+-.. |.+. .|+...+ +.+
T Consensus 275 i~PDi~~~--aKGLT~GY~Pl~a~l~~~------~I~~~~~~~~~~~f~HG~TYsghPlac-AaAla~L~i~e~---e~l 342 (449)
T COG0161 275 IVPDILCL--AKGLTGGYLPLSAVLTSD------RIYEAFSDGDAGAFMHGHTYSGNPLAC-AAALANLDILEE---EDL 342 (449)
T ss_pred CCCCeeee--cccccccchhhHhHhhhH------HHHHHHhcccCCeeccCCccccCHHHH-HHHHHHHHHHHh---cCH
Confidence 2478774 5988442 334445555 455554332 11111111122111 1222 2443332 356
Q ss_pred HHHHHHHHHHHHHHHHh
Q 014724 376 QNKVVSNCRALASRLVE 392 (419)
Q Consensus 376 ~~~v~~n~~~l~~~L~~ 392 (419)
.+++.+...+|.+.|++
T Consensus 343 ~~~~~~~~~~l~~~L~~ 359 (449)
T COG0161 343 LERVAEIGAYLQAGLQA 359 (449)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 77788888999999987
No 380
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=98.32 E-value=5.3e-05 Score=77.94 Aligned_cols=83 Identities=18% Similarity=0.101 Sum_probs=51.1
Q ss_pred HHHHHHHhhh--cCCeEEEEcCC--CCC----CcCChHHHHHHHHHhCCEEEEeccccccccccCCcC--CCCC-CCcEE
Q 014724 240 YDMLEKTAIL--FRPKLIIAGAS--AYP----RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVV 308 (419)
Q Consensus 240 ~d~Le~~l~~--~~pklIi~~~s--~~p----~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~--~~~~-~~Div 308 (419)
++++++.+.. .++..|++..- +.+ ....+++|+++|++||+++|+|++|. |+...|... ..++ ..|++
T Consensus 205 l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t-G~GrtG~~~a~~~~gv~PDi~ 283 (431)
T TIGR03251 205 LRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQT-GVGLTGTAWAYQQLGVQPDIV 283 (431)
T ss_pred HHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchh-ccCccchHHHHHhcCCCCCEE
Confidence 4556666643 24667777531 112 12358999999999999999999975 543333210 1122 46888
Q ss_pred EeCCCCcCCCCCeeEEEEe
Q 014724 309 TTTTHKSLRGPRGGMIFFK 327 (419)
Q Consensus 309 ~~S~hK~l~GprgG~i~~~ 327 (419)
+ +.|.+ |-+|++..+
T Consensus 284 ~--~gK~~--~~~g~~~~~ 298 (431)
T TIGR03251 284 A--FGKKT--QVCGIMAGR 298 (431)
T ss_pred E--ecccC--ccceEEecc
Confidence 6 46876 556777544
No 381
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=98.31 E-value=6.7e-05 Score=77.64 Aligned_cols=139 Identities=14% Similarity=0.114 Sum_probs=73.2
Q ss_pred CHHHHHHHhhhc--CCeEEEEcCC--CCCCcCC----hHHHHHHHHHhCCEEEEeccccccccccCCcC--C--CCC-CC
Q 014724 239 DYDMLEKTAILF--RPKLIIAGAS--AYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--D--PFK-YC 305 (419)
Q Consensus 239 D~d~Le~~l~~~--~pklIi~~~s--~~p~~~d----l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~--~--~~~-~~ 305 (419)
+++.+++++.++ +..+||+..- +.+...+ +++|+++|++||+++|+|++| .|+...|... . .+. ..
T Consensus 237 ~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~-tGfGrtG~~fa~e~~gv~~~P 315 (464)
T TIGR00699 237 CLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQ-TGVGATGKFWAHEHWNLDDPP 315 (464)
T ss_pred HHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeee-eCCCCCcchhHHHhcCCCCCC
Confidence 466778887643 3566776531 2222233 899999999999999999997 5653323210 1 111 37
Q ss_pred cEEEeCCCCcCCCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHH
Q 014724 306 DVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRA 385 (419)
Q Consensus 306 Div~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~ 385 (419)
|+++ +.|.+.| ||+++.++ .+.. ........+.++ +....++...+|+.+.++ ...+++.+.-++
T Consensus 316 Di~t--~gK~lg~--gG~~~~~~------~~~~-~~~~~~~~T~~g-np~~~aaa~a~L~~l~~~---~l~~~~~~~g~~ 380 (464)
T TIGR00699 316 DMVT--FSKKFQT--AGYFFHDP------AFRP-NKPYRQFNTWMG-DPSRALILREIIQEIKRK---DLLENVAHVGDY 380 (464)
T ss_pred CEEE--ehhhhcc--CCccccch------hccC-CCCcccccCCCC-CHHHHHHHHHHHHHHHhc---CHHHHHHHHHHH
Confidence 8865 4798731 24443332 1211 011111112222 222333333356665433 345556556677
Q ss_pred HHHHHHhC
Q 014724 386 LASRLVEL 393 (419)
Q Consensus 386 l~~~L~~~ 393 (419)
|.+.|+++
T Consensus 381 l~~~L~~l 388 (464)
T TIGR00699 381 LYTGLEDL 388 (464)
T ss_pred HHHHHHHH
Confidence 77777664
No 382
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=98.30 E-value=0.00012 Score=72.26 Aligned_cols=173 Identities=18% Similarity=0.122 Sum_probs=90.5
Q ss_pred CCCC-CchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHH--HHH-HHHHHc----cC------C--CCEEEEeCC
Q 014724 137 KRYY-GGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP--ANF-EVYTAI----LK------P--HDRIMGLDL 200 (419)
Q Consensus 137 ~r~~-~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~--A~~-~~~~al----l~------p--GD~Vl~~~~ 200 (419)
.|.| +|-.-+.++ ++.+++++|++.+ +|+..+-+. -++ .+..++ .. . .=+.|++.|
T Consensus 61 ~RNY~G~l~Gipe~----r~l~a~llgv~~~----~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvP 132 (425)
T PF12897_consen 61 CRNYPGGLDGIPEA----RELFAELLGVPPE----NVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVP 132 (425)
T ss_dssp TTSS-S-SS--HHH----HHHHHHHHTS-GG----GEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES
T ss_pred ccCCCCccCChHHH----HHHHHHHhCCCHH----HEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCC
Confidence 4778 666655554 5778899999985 455443332 222 222222 11 1 226789999
Q ss_pred CCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhh-cCCeEEEEcC-CCCCCc--CChHHHHHHHH
Q 014724 201 PHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL-FRPKLIIAGA-SAYPRD--FDYPRMRQIAD 276 (419)
Q Consensus 201 ~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~-~~pklIi~~~-s~~p~~--~dl~~I~~ia~ 276 (419)
.|--|++ -.+..| ++.++++.++ ..+|.|.+|+++.+ ...|.|++.. -+||+- ..-+.++++|.
T Consensus 133 GYDRHFa--------i~E~~G--iemi~VpM~~--dGPDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~ 200 (425)
T PF12897_consen 133 GYDRHFA--------ITEHFG--IEMIPVPMTE--DGPDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAA 200 (425)
T ss_dssp --HHHHH--------HHHHCT---EEEEEEEET--TEE-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHH
T ss_pred CchHHHH--------HHHhhC--cEEEecCCCC--CCCCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhc
Confidence 8877763 123445 4666666653 35999999999854 3457787653 245642 23344444442
Q ss_pred ----HhCCEEEEeccccccccccC-CcC---CCCC------CCc--EEEeCCCC-cCCCCCeeEEEEeCC
Q 014724 277 ----AVGALLMMDMAHISGLVAAS-VVA---DPFK------YCD--VVTTTTHK-SLRGPRGGMIFFKKD 329 (419)
Q Consensus 277 ----~~ga~livD~ah~~Gl~~~g-~~~---~~~~------~~D--iv~~S~hK-~l~GprgG~i~~~~~ 329 (419)
..+..|+.|.|++....... ... +.++ +.| ++..|||| +|+|-..+++..++.
T Consensus 201 m~~AA~DFRI~WDNAY~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKITf~GaGva~~aaS~~ 270 (425)
T PF12897_consen 201 MKTAAPDFRIFWDNAYAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKITFPGAGVAFFAASEA 270 (425)
T ss_dssp S--SSTT-EEEEE-TTTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS-TTSS-EEEEE-HH
T ss_pred CCcCCcCeEEEeecCceEeeccccccchhhhHHHHHHHHcCCCCeEEEEecccccccCCcceeeeecCHH
Confidence 46999999999765544221 111 1221 234 77899999 578877899988874
No 383
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.29 E-value=7.9e-05 Score=73.66 Aligned_cols=255 Identities=19% Similarity=0.187 Sum_probs=131.3
Q ss_pred CChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccC--
Q 014724 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK-- 190 (419)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~-- 190 (419)
+..|+|.+++...+. +..+..-+ ++. ...++ +.+.+.+..+-...+. | .+..|||+||+.++..-.+
T Consensus 72 hanpev~ral~~q~~-k~~hs~~~--~~t----~eav~--l~~~l~~~~~~~~~~r-v-ff~nsGTeAne~ALK~Ark~~ 140 (433)
T KOG1401|consen 72 HANPEVARALAEQAK-KLGHSSNG--YFT----LEAVE--LEEVLSAVLGKGSAER-V-FFCNSGTEANETALKFARKFT 140 (433)
T ss_pred CCCHHHHHHHHHHHh-hheeccCc--ccc----HHHHH--HHHHHHhcccCCCccE-E-EEecCCcHHHHHHHHHHHHhh
Confidence 347999999988764 33221111 111 12222 2345555543322211 2 5668999999988854321
Q ss_pred ----CCC--EEEEeCCCCCccccCccccccccccccccccEEEecccCCCC-CCCCHHHHHHHhhhcC--CeEEEEcCC-
Q 014724 191 ----PHD--RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDEST-GLVDYDMLEKTAILFR--PKLIIAGAS- 260 (419)
Q Consensus 191 ----pGD--~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~-~~iD~d~Le~~l~~~~--pklIi~~~s- 260 (419)
|-+ +|+...-.|.|+. .|+...+ ..+..+..++.+--++ -+ -.-|...+++.++.++ ..+||+..-
T Consensus 141 ~~~~~~~~t~~Iaf~nsyHG~t-lgals~~-~~s~y~~~~~p~~p~v--~~~~ynd~t~l~k~~~~h~~~IaAVIvEPiq 216 (433)
T KOG1401|consen 141 GKKHPEKKTKFIAFENSYHGRT-LGALSVT-GNSKYGLPFDPIAPDV--VTAEYNDSTALEKLFESHKGEIAAVIVEPIQ 216 (433)
T ss_pred cccCCccceeEEEEecCcCCcc-hhHHHhh-cccccCCCCCCCCCce--eecccCCHHHHHHHHHhCCCceEEEEEeccc
Confidence 223 3787766654432 1211100 0011222221110000 01 1357899999998766 456666431
Q ss_pred C----CC-CcCChHHHHHHHHHhCCEEEEeccccccccccCCc--CCCCC-CCcEEEeCCCCcC-CCCCeeEEEEeCCCc
Q 014724 261 A----YP-RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTTTHKSL-RGPRGGMIFFKKDPV 331 (419)
Q Consensus 261 ~----~p-~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~--~~~~~-~~Div~~S~hK~l-~GprgG~i~~~~~~~ 331 (419)
. .| ...-+..|+++|+++|+++|.|+++ .|+...|.. ...+. ..||.+ +-|.| .|.+.|....++
T Consensus 217 GaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~-tG~gR~g~~~a~e~~~~~PDI~t--~aK~L~gGlPigA~~v~~--- 290 (433)
T KOG1401|consen 217 GAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQ-TGLGRLGYGWAQEYFGVTPDITT--VAKPLGGGLPIGATGVRD--- 290 (433)
T ss_pred CCCCcccCCHHHHHHHHHHHhhcCceEEeehhh-hCccccchHHHHHHhCcCCccee--ehhhccCCceeEEEeehH---
Confidence 1 12 1233678999999999999999996 454322211 11122 347765 46988 456777777777
Q ss_pred chhhHHHHhhhcccCCCCCCC---hHHHHHHHHHHHHHhcChHH-HHHHHHHHHHHHHHHHHHHh
Q 014724 332 LGVELESAINNAVFPGLQGGP---HNHTIGGLAVCLKHAQSPEF-KVYQNKVVSNCRALASRLVE 392 (419)
Q Consensus 332 ~~~~l~~~i~~~~~~~~~g~p---~~~~iaala~al~~~~~~~~-~~~~~~v~~n~~~l~~~L~~ 392 (419)
++.+.++.... .++|+. +.-...+...+++.+.++++ +...++-...++.+.+.+.+
T Consensus 291 ---kV~~~i~~~~~-l~hg~Tf~gnpLacsa~~~~l~~l~~~e~~k~vs~~~k~L~~~l~e~~~~ 351 (433)
T KOG1401|consen 291 ---KVAEMISPGDH-LYHGGTFSGNPLACSAGIKVLDELKDPETLKNVSKIGKELRKLLDEYLKK 351 (433)
T ss_pred ---HHHhhcCCCCc-cccCcccCCChhhhhHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 57777765433 222211 11122233346778777665 33334444444445555544
No 384
>PRK08297 L-lysine aminotransferase; Provisional
Probab=98.28 E-value=4.9e-05 Score=78.44 Aligned_cols=141 Identities=17% Similarity=0.114 Sum_probs=73.8
Q ss_pred CHHHHHHHhhh--cCCeEEEEcCC--CCC----CcCChHHHHHHHHHhCCEEEEeccccccccccCCcC--CCCC-CCcE
Q 014724 239 DYDMLEKTAIL--FRPKLIIAGAS--AYP----RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDV 307 (419)
Q Consensus 239 D~d~Le~~l~~--~~pklIi~~~s--~~p----~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~--~~~~-~~Di 307 (419)
|++++++.+.+ .++.+||+..- +.+ ....+++|+++|++||+++|.||++. |+...|... ..++ ..|+
T Consensus 211 ~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~t-GfGRtG~~~a~~~~gv~PDi 289 (443)
T PRK08297 211 ALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQT-GVGLTGTAWAYQQLGVRPDI 289 (443)
T ss_pred HHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-ccCccchHHHHHhcCCCCCE
Confidence 34566677753 34667777531 112 22458999999999999999999973 542222110 1122 4688
Q ss_pred EEeCCCCcCCCCCeeEEEEeCCCcchhhHHH-Hhh-hcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHH
Q 014724 308 VTTTTHKSLRGPRGGMIFFKKDPVLGVELES-AIN-NAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRA 385 (419)
Q Consensus 308 v~~S~hK~l~GprgG~i~~~~~~~~~~~l~~-~i~-~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~ 385 (419)
++ +.|.+ |-+|++..++- .++.. .+. ......+.++. +...++...+++.+.++ ...+++.+..++
T Consensus 290 v~--~gK~l--~~~a~l~~~~i----~~~~~~~~~~~~~~~~T~~gn-pl~~aaa~a~L~~l~~~---~l~~~~~~~g~~ 357 (443)
T PRK08297 290 VA--FGKKT--QVCGIMAGRRV----DEVEDNVFAVSSRINSTWGGN-LVDMVRARRILEVIEED---GLVENAARQGEY 357 (443)
T ss_pred EE--ecccc--cccceecchHH----HHhhhhhccCccccCCCCCcc-HHHHHHHHHHHHHHHhc---CHHHHHHHHHHH
Confidence 86 57987 34566654430 01111 111 01111222222 22233323345555432 345666666777
Q ss_pred HHHHHHh
Q 014724 386 LASRLVE 392 (419)
Q Consensus 386 l~~~L~~ 392 (419)
|.+.|++
T Consensus 358 l~~~L~~ 364 (443)
T PRK08297 358 LLARLEE 364 (443)
T ss_pred HHHHHHH
Confidence 7777765
No 385
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=98.16 E-value=0.00031 Score=77.25 Aligned_cols=91 Identities=14% Similarity=0.055 Sum_probs=55.8
Q ss_pred HHHHHHhhh-------cCCeEEEEcCC--C-CCC----cCChHHHHHHHHHhCCEEEEeccccccccccCCcC--CCCC-
Q 014724 241 DMLEKTAIL-------FRPKLIIAGAS--A-YPR----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK- 303 (419)
Q Consensus 241 d~Le~~l~~-------~~pklIi~~~s--~-~p~----~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~--~~~~- 303 (419)
+.+++.+++ .+...||+..- . .+. ..-+++|+++|++||+++|.||++ .|+.-.|... ..+.
T Consensus 567 ~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~-TGfGRtG~~fa~e~~gv 645 (817)
T PLN02974 567 SYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVF-TGLWRLGVESAWELLGC 645 (817)
T ss_pred HHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecc-cCCCcccchhhHHhcCC
Confidence 556666642 23456666542 1 122 223689999999999999999995 5654333211 1112
Q ss_pred CCcEEEeCCCCcCC-C-CCeeEEEEeCCCcchhhHHHHh
Q 014724 304 YCDVVTTTTHKSLR-G-PRGGMIFFKKDPVLGVELESAI 340 (419)
Q Consensus 304 ~~Div~~S~hK~l~-G-prgG~i~~~~~~~~~~~l~~~i 340 (419)
..||++. .|.++ | .+.|.+++++ ++.+.+
T Consensus 646 ~PDIi~~--gKgLtgG~~Plaa~l~~~------~I~~~f 676 (817)
T PLN02974 646 KPDIACY--AKLLTGGLVPLAATLATE------EVFEAF 676 (817)
T ss_pred CCCEEee--cccccCCCCccEEEEEcH------HHHHhh
Confidence 4688885 59984 4 2566777776 566655
No 386
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=97.92 E-value=0.00019 Score=69.54 Aligned_cols=289 Identities=19% Similarity=0.222 Sum_probs=164.7
Q ss_pred ccccccChh-HHHHHHHHHHHh-hhcccccccC-------CCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHH
Q 014724 81 YSLGEADPE-VCEIITKEKERQ-FKSLELIASE-------NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELET 151 (419)
Q Consensus 81 ~~l~~~~~~-~~~~~~~e~~r~-~~~i~L~~se-------n~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~ 151 (419)
+++.--||+ |..+.+..++.. ...|||..+. .++=+.|++|-...+...-.-.|.. ..| +.++..
T Consensus 29 s~V~maPpDpILGVTeAfk~D~n~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~~ldKEYlp---I~G---l~eF~k 102 (427)
T KOG1411|consen 29 SHVEMAPPDPILGVTEAFKKDPNPKKINLGVGAYRDDNGKPYVLPSVRKAEQQLASLSLDKEYLP---ITG---LAEFNK 102 (427)
T ss_pred hcCCCCCCCCcccHHHHHhcCCCcceeeecccceecCCCCeeeeHHHHHHHHHHhhhcccchhcc---ccc---hHHHHH
Confidence 556666777 566666655433 4568887653 2445888888654433111111211 122 234543
Q ss_pred HHHHHHHHHcCCCCC-----CCceeEecCChHHHH--HHHHHHccCCCCEEEEeCCCCCccccCcccccccccccccccc
Q 014724 152 LCQKRALAAFNLDEN-----KWGVNVQPLSGSPAN--FEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYF 224 (419)
Q Consensus 152 ~~~~~la~~~g~~~~-----~~~v~V~~~sGt~A~--~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~ 224 (419)
+..+ =+||-+.+ .. +.++..|||.|+ -+-+.+..-|+..|.+++|+-|.|.. .....|..+
T Consensus 103 ~sak---La~G~~s~~ik~~Ri-~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~--------if~~ag~~~ 170 (427)
T KOG1411|consen 103 LSAK---LALGDNSPVIKEKRI-VTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKN--------IFKDAGLPV 170 (427)
T ss_pred HHHH---HhhcCCchhhhccce-eEEEeccCcchhhHHHHHHHhhccccceeecCCcccccCc--------cccccCcce
Confidence 3322 23565432 12 457888888755 45566666789999999999776631 123456555
Q ss_pred EEEecccCCCCCCCCHHHHHHHhhhcCCe-EEEE-cCCCCCC-----cCChHHHHHHHHHhCCEEEEeccccccccccCC
Q 014724 225 ESMPYRLDESTGLVDYDMLEKTAILFRPK-LIIA-GASAYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASV 297 (419)
Q Consensus 225 ~~v~~~~~~~~~~iD~d~Le~~l~~~~pk-lIi~-~~s~~p~-----~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~ 297 (419)
....| .++.+..+|++.+-+.+.+.-.. .|++ ..-+||+ ...+++|.++.++.+.+-+.|+| |-|+-....
T Consensus 171 ~~yrY-yd~~t~gld~~g~ledl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmA-YQGfaSG~~ 248 (427)
T KOG1411|consen 171 KFYRY-YDPKTRGLDFKGMLEDLGEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMA-YQGFASGDL 248 (427)
T ss_pred eeeee-ccccccccchHHHHHHHhcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhh-hcccccCCc
Confidence 55554 35678899999987777653333 3332 2346775 23478999999999999999999 445432211
Q ss_pred cCCC-----C-C-CCc-EEEeCCCCcC--CCCCeeEE--EEeCCCcchhhHHHH----hhhcccCCCCCCChHHH--HHH
Q 014724 298 VADP-----F-K-YCD-VVTTTTHKSL--RGPRGGMI--FFKKDPVLGVELESA----INNAVFPGLQGGPHNHT--IGG 359 (419)
Q Consensus 298 ~~~~-----~-~-~~D-iv~~S~hK~l--~GprgG~i--~~~~~~~~~~~l~~~----i~~~~~~~~~g~p~~~~--iaa 359 (419)
.... | + +.+ +++-|+.|.+ .|-|.|.+ ++++. +...+ +...+.|.+ ++|..|. +++
T Consensus 249 d~DA~avR~F~~~g~~~~laQSyAKNMGLYgERvGa~svvc~~a-----d~A~rV~SQlk~liRpmY-SnPP~hGArIv~ 322 (427)
T KOG1411|consen 249 DKDAQAVRLFVEDGHEILLAQSYAKNMGLYGERVGALSVVCKDA-----DEAKRVESQLKILIRPMY-SNPPLHGARIVA 322 (427)
T ss_pred hhhHHHHHHHHHcCCceEeehhhhhhcchhhhccceeEEEecCH-----HHHHHHHHHHHHHhcccc-cCCCccchhhhh
Confidence 1110 1 1 334 6788999986 56676654 45553 33333 333344443 3444443 333
Q ss_pred HHH---HHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCc
Q 014724 360 LAV---CLKHAQSPEFKVYQNKVVSNCRALASRLVELGY 395 (419)
Q Consensus 360 la~---al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~ 395 (419)
... .|+.--..+.+.+..|+...++.|.+.|+..|-
T Consensus 323 ~Il~d~~l~~~W~~evk~MadRi~~mR~~L~d~L~~~gs 361 (427)
T KOG1411|consen 323 TILSDPDLKNQWLGEVKGMADRIISMRQQLFDALEKEGS 361 (427)
T ss_pred hccCChHHHHHHHHHHHHHHHhhhhhHHHHhHHhhcCCC
Confidence 221 122111124566778888889999999887653
No 387
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=97.58 E-value=0.0022 Score=61.56 Aligned_cols=212 Identities=17% Similarity=0.190 Sum_probs=114.5
Q ss_pred eEecCChHHHHHHHHHHc--cCCCCEEEEeCCCCCccccCccccccccccccc-cccEEEecccCCCCCCCCHHHHHHHh
Q 014724 171 NVQPLSGSPANFEVYTAI--LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS-IYFESMPYRLDESTGLVDYDMLEKTA 247 (419)
Q Consensus 171 ~V~~~sGt~A~~~~~~al--l~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g-~~~~~v~~~~~~~~~~iD~d~Le~~l 247 (419)
.|+..|||.|+.+...-+ .-+...|.+.+|+-..|-.- ..-.| ..+...+| .+.++..+|++.+...+
T Consensus 102 ~vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~~i--------f~~aGf~tv~~Y~y-Wd~~~k~~d~e~~Lsdl 172 (410)
T KOG1412|consen 102 GVQSLSGTGALRIAADFLATFYNKNTVYVSNPTWENHHAI--------FEKAGFTTVATYPY-WDAENKCVDLEGFLSDL 172 (410)
T ss_pred ceeeccccchhhhhHHHHHHhcccceeEecCCchhHHHHH--------HHHcCCceeeeeee-ecCCCceecHHHHHHHH
Confidence 478889999887664322 33456788888886665311 11223 11233333 24456789999999888
Q ss_pred hhcCCeEE-EEcC-CCCCCcCC-----hHHHHHHHHHhCCEEEEeccccccccccCCcCCC------CC-CC-cEEEeCC
Q 014724 248 ILFRPKLI-IAGA-SAYPRDFD-----YPRMRQIADAVGALLMMDMAHISGLVAASVVADP------FK-YC-DVVTTTT 312 (419)
Q Consensus 248 ~~~~pklI-i~~~-s~~p~~~d-----l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~------~~-~~-Div~~S~ 312 (419)
+....+.| ++.. .+||+-.| +..|++..++.+.+.+.|.| |-|+..++.-... ++ +. -+|+-|+
T Consensus 173 ~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiA-YQGfASGD~~~DawAiR~fV~~g~e~fv~QSF 251 (410)
T KOG1412|consen 173 ESAPEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIA-YQGFASGDLDADAWAIRYFVEQGFELFVCQSF 251 (410)
T ss_pred hhCCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehh-hcccccCCccccHHHHHHHHhcCCeEEEEhhh
Confidence 75333433 3332 36776444 67889998999999999998 4454322111111 11 32 2789999
Q ss_pred CCcC--CCCCeeEE--EEeCCCcchhhHHHHhhhcccCCCCCCChH--HHHHHHHH---HHHHhcChHHHHHHHHHHHHH
Q 014724 313 HKSL--RGPRGGMI--FFKKDPVLGVELESAINNAVFPGLQGGPHN--HTIGGLAV---CLKHAQSPEFKVYQNKVVSNC 383 (419)
Q Consensus 313 hK~l--~GprgG~i--~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~--~~iaala~---al~~~~~~~~~~~~~~v~~n~ 383 (419)
.|.| .+.|.|-+ +.+++.. +..+.+.+........ +.|.- ..|.+-.. .+.+--...++.+..|+.+.+
T Consensus 252 aKNfGlYneRvGnltvv~~n~a~-i~~v~SQl~lviR~~~-SNPPAyGArIV~kvL~tP~lre~W~~sik~MssRI~~MR 329 (410)
T KOG1412|consen 252 AKNFGLYNERVGNLTVVVNNPAV-IAGVKSQLTLVIRSNW-SNPPAYGARIVHKVLSTPELREQWIQSIKTMSSRIKKMR 329 (410)
T ss_pred hhhcccccccccceEEEecChhH-HHHHHHHHHHHHhhcc-CCCcchhhHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9986 67887643 3333311 0122222221111111 11111 11211110 111111123456677888999
Q ss_pred HHHHHHHHhCC
Q 014724 384 RALASRLVELG 394 (419)
Q Consensus 384 ~~l~~~L~~~G 394 (419)
.+|++.|..+|
T Consensus 330 ~aLrd~L~aL~ 340 (410)
T KOG1412|consen 330 TALRDHLVALK 340 (410)
T ss_pred HHHHHHHHhcC
Confidence 99999998764
No 388
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=97.58 E-value=0.0028 Score=60.51 Aligned_cols=215 Identities=18% Similarity=0.135 Sum_probs=108.6
Q ss_pred hcccccccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHH
Q 014724 103 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF 182 (419)
Q Consensus 103 ~~i~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~ 182 (419)
++|+=.+--.-.+|+|.+|....+.. -....|+. .+++-+-++...+.+-+++ +..+++||++||.
T Consensus 51 DCInNVaHvghchp~VV~A~~kQmat----~~tN~RFl-----hd~lv~cA~~l~stlPeLs-----vc~F~NSGSEAND 116 (452)
T KOG1403|consen 51 DCINNVAHVGHCHPEVVRAGAKQMAT----ISTNNRFL-----HDELVQCARTLTSTLPELS-----VCFFVNSGSEAND 116 (452)
T ss_pred HHhhhhhhcccCCHHHHHHHHHHHhH----hcccchhh-----HHHHHHHHHHHhhcCCCce-----EEEEecCCchhhH
Confidence 44544333345689999988766542 12223332 2456543333223333332 5578899999999
Q ss_pred HHHHHc--cCCCCEEEEeCCCCCccccCccccccccccc-cccc---cEEE---ecc------cC----C--CCCCCCHH
Q 014724 183 EVYTAI--LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSG-TSIY---FESM---PYR------LD----E--STGLVDYD 241 (419)
Q Consensus 183 ~~~~al--l~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~-~g~~---~~~v---~~~------~~----~--~~~~iD~d 241 (419)
+++... .....-|++++-.|.||++.-.-. .+-.+ .|.. .+.+ |.+ .. + +.+..=.|
T Consensus 117 LALRLAR~ftkhqDvItldHAYHGHl~s~mE~--SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad 194 (452)
T KOG1403|consen 117 LALRLARNFTKHQDVITLDHAYHGHLQSVMEV--SPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYAD 194 (452)
T ss_pred HHHHHHHhhcccCceEEEechhccceeeeeec--cceeccCCCCcCCCceeEecCCccccccccccccCCcccchhhhhh
Confidence 988654 223444666677777776431100 00000 0100 0111 110 00 0 00112234
Q ss_pred HHHHHhhhcCC---e--EEEEc--CCCCCCc----CChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC----CCc
Q 014724 242 MLEKTAILFRP---K--LIIAG--ASAYPRD----FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----YCD 306 (419)
Q Consensus 242 ~Le~~l~~~~p---k--lIi~~--~s~~p~~----~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~----~~D 306 (419)
.+++.+++... + +.+.. .|.-+.+ .-++++++-.+.+|-+.|.|+.|. |...-|.+.+.|+ -.|
T Consensus 195 ~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQv-GFGRvG~hyWafq~y~fiPD 273 (452)
T KOG1403|consen 195 PVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQV-GFGRVGSHYWAFQTYNFIPD 273 (452)
T ss_pred HHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhh-cccccchhhhhhhhhccccc
Confidence 55555543111 1 11211 1222222 236888999999999999999973 4332232233343 247
Q ss_pred EEEeCCCCcC-CCCCeeEEEEeCCCcchhhHHHHhhh
Q 014724 307 VVTTTTHKSL-RGPRGGMIFFKKDPVLGVELESAINN 342 (419)
Q Consensus 307 iv~~S~hK~l-~GprgG~i~~~~~~~~~~~l~~~i~~ 342 (419)
|++. .|.+ .|.+.+.+++.+ ++.+.+..
T Consensus 274 IVtm--gKpmGNGhPVa~Vattk------eIA~Af~a 302 (452)
T KOG1403|consen 274 IVTM--GKPMGNGHPVAAVATTK------EIAQAFHA 302 (452)
T ss_pred hhee--cccCCCCCeeeEEeccH------HHHHHhcc
Confidence 7764 5877 566778888887 57666543
No 389
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=97.40 E-value=0.0006 Score=59.90 Aligned_cols=55 Identities=13% Similarity=0.002 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHHcC--CCCCCCceeEecCCh-HHHHHHHHHHccCCCCEEEEeCCCCC
Q 014724 147 DELETLCQKRALAAFN--LDENKWGVNVQPLSG-SPANFEVYTAILKPHDRIMGLDLPHG 203 (419)
Q Consensus 147 ~~lE~~~~~~la~~~g--~~~~~~~v~V~~~sG-t~A~~~~~~all~pGD~Vl~~~~~~~ 203 (419)
.++.+.+.+++.+.+| ++.+ + .+|++++| +.|+..++.++++|||.|++++|.|.
T Consensus 95 ~~lR~AiA~~l~~~~g~~v~~~-p-d~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~ 152 (153)
T PLN02994 95 ANFRKAIANFMAEARGGRVKFD-A-DMIVLSAGATAANEIIMFCIADPGDAFLVPTPYYA 152 (153)
T ss_pred HHHHHHHHHHHHHHhCCCCccc-h-hheEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence 3677778899989888 3321 1 14666766 56999999999999999999998764
No 390
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=97.06 E-value=0.005 Score=59.06 Aligned_cols=263 Identities=15% Similarity=0.165 Sum_probs=142.0
Q ss_pred CCChHHHHHHHhhhhhccCCC----C-CCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCCh-HHHHHHHH
Q 014724 112 NFTSRAVMEAVGSCLTNKYSE----G-LPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-SPANFEVY 185 (419)
Q Consensus 112 n~~~~~V~eal~~~l~~~y~~----g-~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sG-t~A~~~~~ 185 (419)
..+|+.+++.+...++ +|+. | ..|.+ +++ ...+-|...++++.|....| |.+-+. |.-++..+
T Consensus 77 GLmPK~t~~~~~~eLD-kWak~av~gH~~Gkv-----PW~-~~De~il~l~~~iVGA~e~E----vavmNsLTvNlh~Ll 145 (465)
T KOG3846|consen 77 GLMPKSTRNSINAELD-KWAKCAVEGHFKGKV-----PWV-SIDEPILPLLAPIVGAQENE----VAVMNSLTVNLHSLL 145 (465)
T ss_pred ccCchhhHhHHHHHHH-HHHhhhhhccccccc-----cee-ecchhhhhhhhhhccCCchh----hhhHhhhhhHHHHHH
Confidence 3468888887777664 3431 1 11221 111 11223456788899998754 333344 43445666
Q ss_pred HHccCCCC---EEEEeCCCCCccccCccccccccccccccccEEEecccCC--CCCCCCHHHHHHHhhhcCC--eEEEEc
Q 014724 186 TAILKPHD---RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE--STGLVDYDMLEKTAILFRP--KLIIAG 258 (419)
Q Consensus 186 ~all~pGD---~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~--~~~~iD~d~Le~~l~~~~p--klIi~~ 258 (419)
.++.+|-. +|+.- .+++.+..| +....+.+.|+..+-.-..+.+ ....+..+++-+.|++..- .+|+++
T Consensus 146 ~sFyKPTekR~KILlE---~kaFPSDhY-AiesQ~~lhG~~~e~sm~~iePREGEetlRteDILd~IEkngDeiA~v~fS 221 (465)
T KOG3846|consen 146 ISFYKPTEKRFKILLE---KKAFPSDHY-AIESQCKLHGISPENSMIQIEPREGEETLRTEDILDTIEKNGDEIALVCFS 221 (465)
T ss_pred HHhcCCcchhhhhhhc---cCCCCchHH-HHHhhhhhcCCChHHheEEecccccccchhHHHHHHHHHhcCCeEEEEEee
Confidence 77877765 45533 233333222 1112334555543322222222 2235777888888876443 345555
Q ss_pred CCCC--CCcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCCCCcEEEeCCCCcC-CCCCe-eEEEEeCCCcc--
Q 014724 259 ASAY--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSL-RGPRG-GMIFFKKDPVL-- 332 (419)
Q Consensus 259 ~s~~--p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~~~Div~~S~hK~l-~Gprg-G~i~~~~~~~~-- 332 (419)
...| +...|+.+|.+.-+..|+++=.|-||+.|-+.-..+.. ++|+.+-...|.+ +|+.| |-++...+...
T Consensus 222 GvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAHAvgNVpL~LHdW---gVDFACWCSYKYlnaGaGgIgGlFvHekh~~~~ 298 (465)
T KOG3846|consen 222 GVQYYTGQYFDIGAITFAGQFKGCLVGFDLAHAVGNVPLQLHDW---GVDFACWCSYKYLNAGAGGIGGLFVHEKHTKES 298 (465)
T ss_pred cceeecccccchhhhhhcccCCCcEechhhhhhhcCCceEEeec---CCceEEEeeecccccCCCccceeeeehhhhcch
Confidence 5443 34568889986666779999999999887441111111 7999998889987 56544 44444432100
Q ss_pred --------hhhHHHHh--h------hcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHh
Q 014724 333 --------GVELESAI--N------NAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE 392 (419)
Q Consensus 333 --------~~~l~~~i--~------~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~ 392 (419)
..+...+. + .....+-+++|..+..+|+-.+|+...+-.+++.+++-.-...++...++.
T Consensus 299 ~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~q~~~~~lRkrS~lLTgYleyL~k~ 374 (465)
T KOG3846|consen 299 LPRLAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFAQFNINELRKRSLLLTGYLEYLLKA 374 (465)
T ss_pred hhHHhhhccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHHHHHHhhHHHHhhhhhhHHhHHHHHHHH
Confidence 01111111 1 111122356788888888877776554334566666665566666555544
No 391
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=97.04 E-value=0.036 Score=58.16 Aligned_cols=216 Identities=16% Similarity=0.135 Sum_probs=115.2
Q ss_pred HHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHc-cCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccC
Q 014724 154 QKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD 232 (419)
Q Consensus 154 ~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~al-l~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~ 232 (419)
|..++++.|++-.. + -+.--||.|-+++..+. .+++.++++....|.-.++.-. -+..+.++++.
T Consensus 169 QTmi~dlTGL~~aN--A-SLLDEgTAaaEAm~l~~~~~krkk~vvd~~~hpqtlsV~~------TRa~~~~i~v~----- 234 (1001)
T KOG2040|consen 169 QTMITDLTGLPMAN--A-SLLDEGTAAAEAMALCNRINKRKKFVVDSNCHPQTLSVVK------TRAKGFGIKVV----- 234 (1001)
T ss_pred HHhhhhccCCcccc--h-hhhccchhHHHHHHHHHhhcccceEEecCCCCcchhhhhh------ccccccceeEE-----
Confidence 45667778887631 1 22345776555544443 5566777777665554432110 01112111211
Q ss_pred CCCCCCCHHHHHHHhhhcCCeEEEEcCCCC-CCcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC-CCcEEEe
Q 014724 233 ESTGLVDYDMLEKTAILFRPKLIIAGASAY-PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTT 310 (419)
Q Consensus 233 ~~~~~iD~d~Le~~l~~~~pklIi~~~s~~-p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~-~~Div~~ 310 (419)
..|+++...-. .+...|++-+|.+ +.+.|++++++.+++.|..+++- ..+.+--.+..|-+ |+||+++
T Consensus 235 ----~~~~~~~~~s~--~~v~gvlvQYP~t~G~i~d~~el~~~a~~~~s~vv~a----tDLLaLtiLrpPgefGaDIavG 304 (1001)
T KOG2040|consen 235 ----VSDIKEADYSS--KDVSGVLVQYPDTEGSVLDFDELVELAHANGSLVVMA----TDLLALTILRPPGEFGADIAVG 304 (1001)
T ss_pred ----ecCHHHhhccc--cceeEEEEEcCCCCCcccCHHHHHHHhhccCceEEEe----ehhhHHHccCChhhcCceeeec
Confidence 12333322211 2355677777764 56789999999999999876652 23332222223434 8999999
Q ss_pred CCCCc-----CCCCCeeEEEEeCCCc---c--------------hhhH-----HHHhhhcccCCCCCCChHHHHHHH-H-
Q 014724 311 TTHKS-----LRGPRGGMIFFKKDPV---L--------------GVEL-----ESAINNAVFPGLQGGPHNHTIGGL-A- 361 (419)
Q Consensus 311 S~hK~-----l~GprgG~i~~~~~~~---~--------------~~~l-----~~~i~~~~~~~~~g~p~~~~iaal-a- 361 (419)
|.+.. ++||..||+.+.+... + -|.+ ++.|+.-... .+.-+.-|+ +
T Consensus 305 SsQRFGVPlGYGGPHAaFfAv~~~l~R~mPGRiiGvtkD~~gk~a~RLALQTREQHIrRDKAT-----SNICTAQALLAN 379 (1001)
T KOG2040|consen 305 SSQRFGVPLGYGGPHAAFFAVSESLVRMMPGRIIGVTKDALGKEAYRLALQTREQHIRRDKAT-----SNICTAQALLAN 379 (1001)
T ss_pred cccccCccccCCCchHHHHHHHHHHHhhCCCceEeeeecccccHHHHHHHHHHHHHhhhhccc-----hhhhHHHHHHHH
Confidence 99983 4778878776654200 0 0111 1223221110 011111111 1
Q ss_pred ----HHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEec
Q 014724 362 ----VCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS 399 (419)
Q Consensus 362 ----~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~ 399 (419)
.|+- ....+++.+.+++...+-.|..+|+..|.+++.
T Consensus 380 maAmyaiY-HGp~gL~~IArrvh~~T~~l~~~l~~aghel~~ 420 (1001)
T KOG2040|consen 380 MAAMYAIY-HGPHGLKEIARRVHNLTLILAEGLKNAGHELQH 420 (1001)
T ss_pred HHHHHhhh-cCcHHHHHHHHHHHHHHHHHHHHHhhcchhhcc
Confidence 1111 123456888899999999999999988877663
No 392
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=96.81 E-value=0.006 Score=59.56 Aligned_cols=140 Identities=22% Similarity=0.291 Sum_probs=77.9
Q ss_pred CCCHHHHHHHhhhcC----C-eEEEEcC------CCCCCcCChHHHHHHHHHhCCEEEEeccccccccccCCcC----CC
Q 014724 237 LVDYDMLEKTAILFR----P-KLIIAGA------SAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA----DP 301 (419)
Q Consensus 237 ~iD~d~Le~~l~~~~----p-klIi~~~------s~~p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~----~~ 301 (419)
.-.++++|++|.+++ | ..||+.. -|.....-+..|++|++|||+.+|+|+.|. |....|.+. ..
T Consensus 252 ~~Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQT-GgGaTGk~WaHehw~ 330 (484)
T KOG1405|consen 252 QGCLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQT-GGGATGKFWAHEHWN 330 (484)
T ss_pred hhHHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeec-CCCccCceeeehhcC
Confidence 345678888887653 3 3455532 122223347899999999999999999984 433333221 12
Q ss_pred CC-CCcEEEeCCCCcCCCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHH
Q 014724 302 FK-YCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVV 380 (419)
Q Consensus 302 ~~-~~Div~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~ 380 (419)
++ -.|+|++| |-|- -||| +.+. +++..-.+..|....|-|.-..+ +...+.++.+ +...+++.
T Consensus 331 l~~PpD~vTFS--KK~q--~gGf-fh~~------~frpn~pYrifNTWmGdP~k~ll--l~~vv~~I~~---~~Ll~n~~ 394 (484)
T KOG1405|consen 331 LDSPPDVVTFS--KKFQ--TGGF-FHDE------EFRPNEPYRIFNTWMGDPSKNLL--LEEVVQEIKR---EDLLNNVA 394 (484)
T ss_pred CCCCccceehh--hhhh--cCcc-ccCc------ccCCCchHHHhhhhcCChHHHHH--HHHHHHHHhH---HHHHHHHH
Confidence 22 36888764 6552 2453 2233 33332223345555666654443 2334555543 33455555
Q ss_pred HHHHHHHHHHHhC
Q 014724 381 SNCRALASRLVEL 393 (419)
Q Consensus 381 ~n~~~l~~~L~~~ 393 (419)
..-++|.++|.++
T Consensus 395 ~vG~~l~~gL~~L 407 (484)
T KOG1405|consen 395 HVGKALLKGLLEL 407 (484)
T ss_pred HHHHHHHHHHHHH
Confidence 5566777777653
No 393
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=96.42 E-value=0.026 Score=53.68 Aligned_cols=263 Identities=16% Similarity=0.182 Sum_probs=136.5
Q ss_pred hhcccccccCCCChHHHHHHHhhhhhccCCCCCC--CCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHH
Q 014724 102 FKSLELIASENFTSRAVMEAVGSCLTNKYSEGLP--GKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP 179 (419)
Q Consensus 102 ~~~i~L~~sen~~~~~V~eal~~~l~~~y~~g~p--~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~ 179 (419)
.+.+++.+++..+|..|+..+.+.+.|.-.-|-. .-.+ .+.++...++ .+...+.++++++.. +.+...-.+||.
T Consensus 6 ~~vvnFaaGPAklp~~VL~e~qkdl~n~~g~GisV~EmSH-Rsk~f~kii~-~tes~lreLlniPdn-~~vlf~QGGGt~ 82 (370)
T KOG2790|consen 6 ERVVNFAAGPAKLPESVLLEAQKDLLNFNGSGISVMEMSH-RSKDFAKIIN-DTESLLRELLNIPDN-YKVLFLQGGGTG 82 (370)
T ss_pred cceeecCCCcccCCHHHHHHHHHHhhccCCCcceEEEecc-cchhHHHHHH-HHHHHHHHHHcCCCc-eeEEEEeCCCcc
Confidence 3568999999999999999999888764433321 0011 1223333333 344667788899874 434444456776
Q ss_pred HHHHHHHHcc--CCCC---EEEEeCCCCCccccCccccccccccccccccEEEecccCCCC--CCCCHHHHHHHhhhcCC
Q 014724 180 ANFEVYTAIL--KPHD---RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDEST--GLVDYDMLEKTAILFRP 252 (419)
Q Consensus 180 A~~~~~~all--~pGD---~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~--~~iD~d~Le~~l~~~~p 252 (419)
-..++...|. +.|+ -|++ |-++.-.+ +-+...|- ...+..+..+.+ ..+|.+..+.. .+.
T Consensus 83 qFaAv~lNL~glK~g~~AdYiVT------GsWS~KA~---~EAkk~~~-~~~V~~~~k~y~ygkvPd~~~w~~~---~da 149 (370)
T KOG2790|consen 83 QFAAVPLNLIGLKHGRCADYVVT------GSWSAKAA---EEAKKYGT-PNIVIPKLKSYTYGKVPDPSTWELN---PDA 149 (370)
T ss_pred cccccchhhhccccCCccceEEe------ccccHHHH---HHHHhhCC-ceEEeccccccccCcCCChhhcccC---CCc
Confidence 6666666664 5554 2332 21221100 00111121 111222222222 35666655432 234
Q ss_pred eEEEEcCCCC--CCcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcCCCCCe-eEEEEe
Q 014724 253 KLIIAGASAY--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFK 327 (419)
Q Consensus 253 klIi~~~s~~--p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l~Gprg-G~i~~~ 327 (419)
+.|..|...+ +..+| .+- +-.-+|+++++|++ +.+. ..|++ .-+++..+.+|.. ||.| -.++.+
T Consensus 150 ~yvyyCaNETVHGVEf~--~~P-~~~~~~~vlVaDmS--Snfl-----SrpvDvsk~gvi~aGAQKN~-G~aG~Tvvivr 218 (370)
T KOG2790|consen 150 SYVYYCANETVHGVEFD--FIP-VNDPKGAVLVADMS--SNFL-----SRPVDVSKFGVIFAGAQKNV-GPAGVTVVIVR 218 (370)
T ss_pred cEEEEecCceeeceecC--CCC-CCCCCCceEEEecc--cchh-----cCCccchhcceEEecccccc-CccccEEEEEe
Confidence 5666554222 22221 111 11346899999996 3332 23444 4568888999987 7777 555566
Q ss_pred CCCcchhhHHHHhh---hcccC--------CCCCCChHHHHHHHHHHHHHhcChH-HHHHHHHHHHHHHHHHHHHHhC-C
Q 014724 328 KDPVLGVELESAIN---NAVFP--------GLQGGPHNHTIGGLAVCLKHAQSPE-FKVYQNKVVSNCRALASRLVEL-G 394 (419)
Q Consensus 328 ~~~~~~~~l~~~i~---~~~~~--------~~~g~p~~~~iaala~al~~~~~~~-~~~~~~~v~~n~~~l~~~L~~~-G 394 (419)
+. +..+.. ..++. .+..+|....+-.....++.+++.+ .+...+.-.+.++.+++.+.+. |
T Consensus 219 ~d------llg~~~~~tP~v~dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~iD~s~g 292 (370)
T KOG2790|consen 219 KD------LLGNALDITPSVLDYKIMDKNNSLYNTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDAIDNSNG 292 (370)
T ss_pred hh------hhcccccCCccccceeeeccccccccCCCeeeeeehhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 63 322111 11111 1223444444444455566655443 4666666677788899999875 8
Q ss_pred cEE
Q 014724 395 YKL 397 (419)
Q Consensus 395 ~~v 397 (419)
|-.
T Consensus 293 fy~ 295 (370)
T KOG2790|consen 293 FYR 295 (370)
T ss_pred eEE
Confidence 743
No 394
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=95.40 E-value=0.059 Score=50.83 Aligned_cols=111 Identities=21% Similarity=0.287 Sum_probs=71.6
Q ss_pred CCCCHHHHHHHhhhcCCeEEEEcC---CCC-CC-cCChHHHHHHHHHhCCEEEEeccccccccccCCcC-----CCCCCC
Q 014724 236 GLVDYDMLEKTAILFRPKLIIAGA---SAY-PR-DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA-----DPFKYC 305 (419)
Q Consensus 236 ~~iD~d~Le~~l~~~~pklIi~~~---s~~-p~-~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~-----~~~~~~ 305 (419)
-.-|++.+++.+++-.+..|.+-+ +.+ |+ ...+++|+.||..|++.-+|..|+ |+-...... ......
T Consensus 139 l~tdleav~~~iee~g~dcilci~sttscfapr~pd~leaiaaica~~diphivnnay--glqsee~i~~iaa~~~~gri 216 (432)
T KOG3843|consen 139 LITDLEAVEAIIEELGEDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAY--GLQSEECIHKIAAAAECGRI 216 (432)
T ss_pred HHHhHHHHHHHHHHhCCceEEEEeecccccCCCCCchHHHHHHHHHccCchhhhcccc--ccchHHHHHHHHHHhhhccH
Confidence 356899999999876777544322 222 44 456999999999999999999985 332111000 001146
Q ss_pred cEEEeCCCCcCCCCCeeEEEEe-CCCcchhhHHHHhhhcccCCC-CCCChH
Q 014724 306 DVVTTTTHKSLRGPRGGMIFFK-KDPVLGVELESAINNAVFPGL-QGGPHN 354 (419)
Q Consensus 306 Div~~S~hK~l~GprgG~i~~~-~~~~~~~~l~~~i~~~~~~~~-~g~p~~ 354 (419)
|.++-|+.|.|..|-||.|+.- ++ .+.+.|.+. +|+- ...|+.
T Consensus 217 da~vqsldknf~vpvggaiia~fk~-----n~iq~iak~-ypgrasa~ps~ 261 (432)
T KOG3843|consen 217 DAFVQSLDKNFMVPVGGAIIAAFKD-----NFIQEIAKM-YPGRASASPSL 261 (432)
T ss_pred HHHHHHhhhcceeecchhHhhHhHH-----HHHHHHHHh-CCCccccCccH
Confidence 8999999999999988776542 22 566666654 4543 234443
No 395
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=95.28 E-value=0.15 Score=50.09 Aligned_cols=177 Identities=15% Similarity=0.077 Sum_probs=83.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCceeEecCChH-HHHHHHHHHccCC----C--CEEEEeCCCCCccccCccccccccccc
Q 014724 147 DELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKP----H--DRIMGLDLPHGGHLSHGFMTPKRRVSG 219 (419)
Q Consensus 147 ~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt-~A~~~~~~all~p----G--D~Vl~~~~~~~g~~s~~~~~~~~~i~~ 219 (419)
.+||+.++ +|-++.|-...+- -.+++++|+ +.+++++.+|..+ + -.|+...|-|..+.. ++. . +
T Consensus 46 ~eL~~~Ir-~LH~~VGNAvt~g-r~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~---qt~---~-f 116 (363)
T PF04864_consen 46 PELERQIR-RLHRVVGNAVTDG-RYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPE---QTD---F-F 116 (363)
T ss_dssp HHHHHHHH-HHHHHH-SB--TT-SEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHH---HCC---C-T
T ss_pred HHHHHHHH-HHHHHhccccccC-cEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHH---HHH---h-c
Confidence 57887764 4666665433211 247778885 6888898888433 1 156666665443321 110 0 1
Q ss_pred cccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCCcCChHHHHH-HHHHhCCEEEEeccccccccccCCc
Q 014724 220 TSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQ-IADAVGALLMMDMAHISGLVAASVV 298 (419)
Q Consensus 220 ~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~~~dl~~I~~-ia~~~ga~livD~ah~~Gl~~~g~~ 298 (419)
.+..++.-- |...+. +- ....+-+=++..||||-- .|++ +.+.-+..+|.|-|+|--..
T Consensus 117 ~s~~y~w~G---da~~~~-~~-------~~~~~~IElVTSPNNPDG----~lr~~V~~g~~~k~I~D~AYYWPhy----- 176 (363)
T PF04864_consen 117 DSRLYKWAG---DASNFK-NS-------DNPSPYIELVTSPNNPDG----QLREAVLNGSSGKVIHDLAYYWPHY----- 176 (363)
T ss_dssp -BTTEEEEE---ECCCGT-T--------S-CCGEEEEEESS-TTT----------SSTTTEEEEEEE-TT-STTT-----
T ss_pred cccCccccc---cHHhhc-cC-------CCCCCeEEEEeCCCCCcc----cccchhcCCCCcceeeeeeeecccc-----
Confidence 111122111 211111 10 001222336778999842 1222 23445667899999653311
Q ss_pred CCCCC---CCcEEEeCCCCc--CCCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHH
Q 014724 299 ADPFK---YCDVVTTTTHKS--LRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIG 358 (419)
Q Consensus 299 ~~~~~---~~Div~~S~hK~--l~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~ia 358 (419)
.|+. .-||..+|+||. .+|.|.||.+.+++ ++.+++...+...+.|...-.++-
T Consensus 177 -TpI~~~aD~DiMLFT~SK~TGHAGSR~GWAlVKD~-----~Va~kM~~y~~lnTiGvS~dsQLR 235 (363)
T PF04864_consen 177 -TPITAPADHDIMLFTLSKLTGHAGSRFGWALVKDE-----EVAKKMTKYMELNTIGVSRDSQLR 235 (363)
T ss_dssp -S---S-B--SEEEEEHHHHCS-GGG-EEEEEES-H-----HHHHHHHHHHHHHCSS--HHHHHH
T ss_pred -cccCCCCCCceEEEEEecccCccccccceeeecCH-----HHHHHHHHHHHHhcccCcHHHHHH
Confidence 2332 458999999995 37788899999986 676666554433334444433333
No 396
>PF04131 NanE: Putative N-acetylmannosamine-6-phosphate epimerase; InterPro: IPR007260 This family represents a putative ManNAc-6-P-to-GlcNAc-6P epimerase in the N-acetylmannosamine (ManNAc) utilization pathway found mainly in pathogenic bacteria for the reaction: N-acyl-D-glucosamine 6-phosphate = N-acyl-D-mannosamine 6-phosphate It is probably encoded by the yhcJ gene [].; GO: 0047465 N-acylglucosamine-6-phosphate 2-epimerase activity, 0006051 N-acetylmannosamine metabolic process; PDB: 1Y0E_B 3IGS_A 1YXY_A 3Q58_B.
Probab=79.28 E-value=5.4 Score=36.13 Aligned_cols=72 Identities=17% Similarity=0.150 Sum_probs=47.2
Q ss_pred CCCHHHHHHHhhhcCCeEEEEcCCCCCCcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCCCCcEEEeCCCC
Q 014724 237 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHK 314 (419)
Q Consensus 237 ~iD~d~Le~~l~~~~pklIi~~~s~~p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~~~Div~~S~hK 314 (419)
.+.++++.++++. ...+|.++.+.-++..+++++.+-.|+...+++.|++-....... .. -|+|++.+|++=
T Consensus 51 TPT~~ev~~l~~a-GadIIAlDaT~R~Rp~~l~~li~~i~~~~~l~MADist~ee~~~A----~~-~G~D~I~TTLsG 122 (192)
T PF04131_consen 51 TPTLKEVDALAEA-GADIIALDATDRPRPETLEELIREIKEKYQLVMADISTLEEAINA----AE-LGFDIIGTTLSG 122 (192)
T ss_dssp S-SHHHHHHHHHC-T-SEEEEE-SSSS-SS-HHHHHHHHHHCTSEEEEE-SSHHHHHHH----HH-TT-SEEE-TTTT
T ss_pred CCCHHHHHHHHHc-CCCEEEEecCCCCCCcCHHHHHHHHHHhCcEEeeecCCHHHHHHH----HH-cCCCEEEccccc
Confidence 4678898888864 788999998887777889999888898889999999743221110 00 178999998764
No 397
>COG3010 NanE Putative N-acetylmannosamine-6-phosphate epimerase [Carbohydrate transport and metabolism]
Probab=74.88 E-value=7 Score=35.85 Aligned_cols=70 Identities=20% Similarity=0.177 Sum_probs=50.4
Q ss_pred CCHHHHHHHhhhcCCeEEEEcCCCCCCcC-ChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC-CCcEEEeCCCC
Q 014724 238 VDYDMLEKTAILFRPKLIIAGASAYPRDF-DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHK 314 (419)
Q Consensus 238 iD~d~Le~~l~~~~pklIi~~~s~~p~~~-dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~-~~Div~~S~hK 314 (419)
..+++++++++. ...+|.++.+.-++.. +++++.+-.|..|.+++.|++..-... +... |+|++-+|+|=
T Consensus 86 ptlkeVd~L~~~-Ga~IIA~DaT~R~RP~~~~~~~i~~~k~~~~l~MAD~St~ee~l------~a~~~G~D~IGTTLsG 157 (229)
T COG3010 86 PTLKEVDALAEA-GADIIAFDATDRPRPDGDLEELIARIKYPGQLAMADCSTFEEGL------NAHKLGFDIIGTTLSG 157 (229)
T ss_pred ccHHHHHHHHHC-CCcEEEeecccCCCCcchHHHHHHHhhcCCcEEEeccCCHHHHH------HHHHcCCcEEeccccc
Confidence 456777777764 6788888887777655 899998888888999999997432111 1111 78999888764
No 398
>COG1504 Uncharacterized conserved protein [Function unknown]
Probab=66.25 E-value=13 Score=30.48 Aligned_cols=48 Identities=15% Similarity=0.094 Sum_probs=39.4
Q ss_pred CCCCHHHHHHHhhhcCCeEEEEcCCCCCCcCChHHHHHHHHHhCCEEEE
Q 014724 236 GLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMM 284 (419)
Q Consensus 236 ~~iD~d~Le~~l~~~~pklIi~~~s~~p~~~dl~~I~~ia~~~ga~liv 284 (419)
-.++++++++.+.+ +|..|+++.-.+++..-.++..+++++.++=+++
T Consensus 47 Hkl~~eEle~~lee-~~E~ivvGTG~~G~l~l~~ea~e~~r~k~~~vi~ 94 (121)
T COG1504 47 HKLALEELEELLEE-GPEVIVVGTGQSGMLELSEEAREFFRKKGCEVIE 94 (121)
T ss_pred cccCHHHHHHHHhc-CCcEEEEecCceeEEEeCHHHHHHHHhcCCeEEE
Confidence 36999999999985 8999999887777765568889999998866654
No 399
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=62.38 E-value=25 Score=28.81 Aligned_cols=43 Identities=9% Similarity=-0.143 Sum_probs=32.4
Q ss_pred CCCHHHHHHHhhhcCCeEEEEcCCCCCCcCChHHHHHHHHHhC
Q 014724 237 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG 279 (419)
Q Consensus 237 ~iD~d~Le~~l~~~~pklIi~~~s~~p~~~dl~~I~~ia~~~g 279 (419)
....+++.+.+.+.+|++|.++.+......+..++.+.+++.+
T Consensus 36 ~~~~~~l~~~~~~~~pdvV~iS~~~~~~~~~~~~~i~~l~~~~ 78 (119)
T cd02067 36 DVPPEEIVEAAKEEDADAIGLSGLLTTHMTLMKEVIEELKEAG 78 (119)
T ss_pred CCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHcC
Confidence 3667888888888899999998765555556778888877763
No 400
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=56.96 E-value=31 Score=35.00 Aligned_cols=63 Identities=13% Similarity=0.079 Sum_probs=39.7
Q ss_pred EEEecccCCCCCCCCHHHHHHHhhh--cCCeEEEEcCCCCCCcCChHHHHHHHHHhCCEEEEecc
Q 014724 225 ESMPYRLDESTGLVDYDMLEKTAIL--FRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMA 287 (419)
Q Consensus 225 ~~v~~~~~~~~~~iD~d~Le~~l~~--~~pklIi~~~s~~p~~~dl~~I~~ia~~~ga~livD~a 287 (419)
..++++.++.....+...|.+.++. ...+++|++.-.-+...+.+.+.++|++.|.++++|-=
T Consensus 115 QllRvD~Ee~~~~~~~~~ll~~~~~~l~~~~~vVLSDY~KG~L~~~q~~I~~ar~~~~pVLvDPK 179 (467)
T COG2870 115 QLLRLDFEEKFPIEDENKLLEKIKNALKSFDALVLSDYAKGVLTNVQKMIDLAREAGIPVLVDPK 179 (467)
T ss_pred eEEEecccccCcchhHHHHHHHHHHHhhcCCEEEEeccccccchhHHHHHHHHHHcCCcEEECCC
Confidence 4555554321122344444444432 24567888654555666799999999999999999963
No 401
>KOG0630 consensus Predicted pyridoxal-dependent decarboxylase [Amino acid transport and metabolism]
Probab=55.54 E-value=1.6e+02 Score=30.82 Aligned_cols=51 Identities=24% Similarity=0.237 Sum_probs=36.3
Q ss_pred CCCCHHHHHHHhhhc-----CCeEEE--EcCCCCCCcCChHHHHHHHHHhC-CEEEEec
Q 014724 236 GLVDYDMLEKTAILF-----RPKLII--AGASAYPRDFDYPRMRQIADAVG-ALLMMDM 286 (419)
Q Consensus 236 ~~iD~d~Le~~l~~~-----~pklIi--~~~s~~p~~~dl~~I~~ia~~~g-a~livD~ 286 (419)
|.||-..+++.+++. +|-++| ++.+-.+....+-+|.+||++|. .|++.-.
T Consensus 272 griDhh~feKiideDlaagkkPLilia~iGasi~GqnDmi~kildi~eahakfWLHasG 330 (838)
T KOG0630|consen 272 GRIDHHLFEKIIDEDLAAGKKPLILIADIGASICGQNDMILKILDICEAHAKFWLHASG 330 (838)
T ss_pred ccccHHHHHHHHHHHHhCCCCCeEEEEeccchhhcchHHHHHHHHHHHHhhheeEeecc
Confidence 589999999998752 343443 34455555556889999999997 7777654
No 402
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=55.27 E-value=26 Score=28.49 Aligned_cols=52 Identities=15% Similarity=0.122 Sum_probs=36.2
Q ss_pred CCHHHHHHHhhhcCCeEEEEcCCCCCCcCChHHHHHHHHHh--CCEEEEecccc
Q 014724 238 VDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAV--GALLMMDMAHI 289 (419)
Q Consensus 238 iD~d~Le~~l~~~~pklIi~~~s~~p~~~dl~~I~~ia~~~--ga~livD~ah~ 289 (419)
.+.+++.+.+.+.+|++|.++.+..+......++.+..++. ++.+++=..|.
T Consensus 38 ~~~~~l~~~~~~~~pd~V~iS~~~~~~~~~~~~l~~~~k~~~p~~~iv~GG~~~ 91 (121)
T PF02310_consen 38 VPPEELVEALRAERPDVVGISVSMTPNLPEAKRLARAIKERNPNIPIVVGGPHA 91 (121)
T ss_dssp B-HHHHHHHHHHTTCSEEEEEESSSTHHHHHHHHHHHHHTTCTTSEEEEEESSS
T ss_pred CCHHHHHHHHhcCCCcEEEEEccCcCcHHHHHHHHHHHHhcCCCCEEEEECCch
Confidence 55689988888889999988764444334456666666665 77888877653
No 403
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=52.80 E-value=48 Score=28.32 Aligned_cols=53 Identities=15% Similarity=0.160 Sum_probs=38.2
Q ss_pred cccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCCcCChHHHHHHHHHhC
Q 014724 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG 279 (419)
Q Consensus 222 ~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~~~dl~~I~~ia~~~g 279 (419)
.+++++.+.. .+.++++.+.+.+.+|++|.++.........++++.+..++.+
T Consensus 30 ~G~eVi~LG~-----~vp~e~i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~~~ 82 (137)
T PRK02261 30 AGFEVINLGV-----MTSQEEFIDAAIETDADAILVSSLYGHGEIDCRGLREKCIEAG 82 (137)
T ss_pred CCCEEEECCC-----CCCHHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHHHHhcC
Confidence 3457766543 3668888888888899999998766655556777777777663
No 404
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=50.12 E-value=42 Score=28.45 Aligned_cols=54 Identities=15% Similarity=0.126 Sum_probs=39.4
Q ss_pred cccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCCcCChHHHHHHHHHhCC
Q 014724 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGA 280 (419)
Q Consensus 222 ~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~~~dl~~I~~ia~~~ga 280 (419)
.+|+++.+..+ ..++++-+.+.++++.+|.++.-...+...++++.+..++.|+
T Consensus 26 ~GfeVidLG~~-----v~~e~~v~aa~~~~adiVglS~L~t~~~~~~~~~~~~l~~~gl 79 (128)
T cd02072 26 AGFNVVNLGVL-----SPQEEFIDAAIETDADAILVSSLYGHGEIDCKGLREKCDEAGL 79 (128)
T ss_pred CCCEEEECCCC-----CCHHHHHHHHHHcCCCEEEEeccccCCHHHHHHHHHHHHHCCC
Confidence 34677765543 6678888888778999998876555555667888888888764
No 405
>PF14639 YqgF: Holliday-junction resolvase-like of SPT6 ; PDB: 3PSI_A 3PSF_A.
Probab=47.58 E-value=16 Score=31.91 Aligned_cols=43 Identities=21% Similarity=0.303 Sum_probs=26.6
Q ss_pred CCCHHHHHHHhhhcCCeEEEEcCCCCCCcCChHHHHHHHHHhC
Q 014724 237 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG 279 (419)
Q Consensus 237 ~iD~d~Le~~l~~~~pklIi~~~s~~p~~~dl~~I~~ia~~~g 279 (419)
.-|.+.|.+.+.+++|.+|.++..+..+..-.+.|.++.++..
T Consensus 49 ~~~~~~l~~~i~~~kP~vI~v~g~~~~s~~l~~~v~~~v~~~~ 91 (150)
T PF14639_consen 49 EEDMERLKKFIEKHKPDVIAVGGNSRESRKLYDDVRDIVEELD 91 (150)
T ss_dssp HHHHHHHHHHHHHH--SEEEE--SSTHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHHHHHHHhh
Confidence 4567788889999999999996533323333566777777654
No 406
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=47.44 E-value=54 Score=27.16 Aligned_cols=51 Identities=14% Similarity=0.038 Sum_probs=35.0
Q ss_pred ccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCCcCChHHHHHHHHHh
Q 014724 223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAV 278 (419)
Q Consensus 223 ~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~~~dl~~I~~ia~~~ 278 (419)
+|+++.+.. ...++++.+.+.+.+|++|+++.........++++.+..++.
T Consensus 27 G~~vi~lG~-----~vp~e~~~~~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~~ 77 (122)
T cd02071 27 GFEVIYTGL-----RQTPEEIVEAAIQEDVDVIGLSSLSGGHMTLFPEVIELLREL 77 (122)
T ss_pred CCEEEECCC-----CCCHHHHHHHHHHcCCCEEEEcccchhhHHHHHHHHHHHHhc
Confidence 356665432 366778877777789999999876554445567777777766
No 407
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=46.78 E-value=48 Score=28.35 Aligned_cols=54 Identities=19% Similarity=0.167 Sum_probs=39.2
Q ss_pred cccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCCcCChHHHHHHHHHhCC
Q 014724 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGA 280 (419)
Q Consensus 222 ~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~~~dl~~I~~ia~~~ga 280 (419)
.+|+++.+..+ ..++++-+.+.++++.+|.++.-...+...++++.+.+++.|+
T Consensus 28 ~GfeVi~LG~~-----v~~e~~v~aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~~gl 81 (134)
T TIGR01501 28 AGFNVVNLGVL-----SPQEEFIKAAIETKADAILVSSLYGHGEIDCKGLRQKCDEAGL 81 (134)
T ss_pred CCCEEEECCCC-----CCHHHHHHHHHHcCCCEEEEecccccCHHHHHHHHHHHHHCCC
Confidence 44677765543 6788888888888999988876444445567888888888774
No 408
>TIGR03586 PseI pseudaminic acid synthase.
Probab=46.30 E-value=32 Score=34.09 Aligned_cols=89 Identities=18% Similarity=0.279 Sum_probs=55.6
Q ss_pred CCCCCHHHHHHHhhh---c-CCeEEE-EcCCCCCC---cCChHHHHHHHHHhCCEE-EEeccccccccccCCcCCCCC-C
Q 014724 235 TGLVDYDMLEKTAIL---F-RPKLII-AGASAYPR---DFDYPRMRQIADAVGALL-MMDMAHISGLVAASVVADPFK-Y 304 (419)
Q Consensus 235 ~~~iD~d~Le~~l~~---~-~pklIi-~~~s~~p~---~~dl~~I~~ia~~~ga~l-ivD~ah~~Gl~~~g~~~~~~~-~ 304 (419)
+|.-++++++.+++- . .+++++ .|.++||+ ..++..|..+.++++..| ++| |..|....- -.+. |
T Consensus 141 tG~~t~~Ei~~Av~~i~~~g~~~i~LlhC~s~YP~~~~~~nL~~i~~lk~~f~~pVG~SD--Ht~G~~~~~---aAva~G 215 (327)
T TIGR03586 141 TGIATLEEIQEAVEACREAGCKDLVLLKCTSSYPAPLEDANLRTIPDLAERFNVPVGLSD--HTLGILAPV---AAVALG 215 (327)
T ss_pred CCCCCHHHHHHHHHHHHHCCCCcEEEEecCCCCCCCcccCCHHHHHHHHHHhCCCEEeeC--CCCchHHHH---HHHHcC
Confidence 444567777766532 1 235443 46778885 357899999989999888 888 877742110 0011 7
Q ss_pred CcEE--EeCCCCcCCCCCeeEEEEeC
Q 014724 305 CDVV--TTTTHKSLRGPRGGMIFFKK 328 (419)
Q Consensus 305 ~Div--~~S~hK~l~GprgG~i~~~~ 328 (419)
++++ -++..|++.||..-.-+.++
T Consensus 216 A~iIEkH~tld~~l~G~D~~~Sl~p~ 241 (327)
T TIGR03586 216 ACVIEKHFTLDRSDGGVDSAFSLEPD 241 (327)
T ss_pred CCEEEeCCChhhcCCCCChhccCCHH
Confidence 7765 56778888887664433333
No 409
>cd05126 Mth938 Mth938 domain. Mth938 is a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. This protein crystallizes as a dimer, although it is monomeric in solution, with one disulfide bond in each monomer. The function of the protein has not been determined.
Probab=45.80 E-value=72 Score=26.54 Aligned_cols=50 Identities=12% Similarity=0.013 Sum_probs=37.5
Q ss_pred CCCHHHHHHHhhhcCCeEEEEcCCCCCCcCChHHHHHHHHHhCCEEEEecc
Q 014724 237 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMA 287 (419)
Q Consensus 237 ~iD~d~Le~~l~~~~pklIi~~~s~~p~~~dl~~I~~ia~~~ga~livD~a 287 (419)
.++.+++++++.. +|.+|+++.-.......-.++.+..++.|+=+.+-..
T Consensus 45 ~l~~~~l~~ll~~-~peivliGTG~~~~~~~~~~~~~~l~~~Gi~ve~m~T 94 (117)
T cd05126 45 GLQPEELEELLEE-GVEVIVIGTGQSGALKVPPETVEKLEKRGVEVLVLPT 94 (117)
T ss_pred cCCHHHHHHHHhc-CCCEEEEcCCCCccccCCHHHHHHHHhcCCEEEEcCh
Confidence 5899999999975 7999999876555433346777788889987776443
No 410
>smart00642 Aamy Alpha-amylase domain.
Probab=44.72 E-value=19 Score=31.89 Aligned_cols=27 Identities=19% Similarity=0.331 Sum_probs=23.7
Q ss_pred CCCCcCChHHHHHHHHHhCCEEEEecc
Q 014724 261 AYPRDFDYPRMRQIADAVGALLMMDMA 287 (419)
Q Consensus 261 ~~p~~~dl~~I~~ia~~~ga~livD~a 287 (419)
.+++..+++++++-||++|+.||.|.+
T Consensus 65 ~~Gt~~d~~~lv~~~h~~Gi~vilD~V 91 (166)
T smart00642 65 RFGTMEDFKELVDAAHARGIKVILDVV 91 (166)
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 455667899999999999999999986
No 411
>COG4820 EutJ Ethanolamine utilization protein, possible chaperonin [Amino acid transport and metabolism]
Probab=43.50 E-value=70 Score=29.49 Aligned_cols=89 Identities=22% Similarity=0.239 Sum_probs=54.6
Q ss_pred HHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCC
Q 014724 156 RALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDEST 235 (419)
Q Consensus 156 ~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~ 235 (419)
.++.+++++.. .-|-..+||.++ ++++.|+.+.+-+-+.||| |- ..+ + ..+
T Consensus 132 Aaa~vL~l~dg---~VVDiGGGTTGI-----si~kkGkViy~ADEpTGGt--Hm---------------tLv---l-AG~ 182 (277)
T COG4820 132 AAADVLQLDDG---GVVDIGGGTTGI-----SIVKKGKVIYSADEPTGGT--HM---------------TLV---L-AGN 182 (277)
T ss_pred hHHHHhccCCC---cEEEeCCCccee-----EEEEcCcEEEeccCCCCce--eE---------------EEE---E-ecc
Confidence 35567788874 336667788776 5789999998887666664 20 111 1 134
Q ss_pred CCCCHHHHHHHhhhcCCeEEEEcCCCCCCcCC-hHHHHHHHHHh
Q 014724 236 GLVDYDMLEKTAILFRPKLIIAGASAYPRDFD-YPRMRQIADAV 278 (419)
Q Consensus 236 ~~iD~d~Le~~l~~~~pklIi~~~s~~p~~~d-l~~I~~ia~~~ 278 (419)
+.|++|+.|+.-+.++ |- .-.+|..-| ++++++|.++|
T Consensus 183 ygi~~EeAE~~Kr~~k-~~----~Eif~~v~PV~eKMAeIv~~h 221 (277)
T COG4820 183 YGISLEEAEQYKRGHK-KG----EEIFPVVKPVYEKMAEIVARH 221 (277)
T ss_pred cCcCHhHHHHhhhccc-cc----hhcccchhHHHHHHHHHHHHH
Confidence 6788988887644321 10 112333333 68999999876
No 412
>PLN02672 methionine S-methyltransferase
Probab=43.40 E-value=2.5e+02 Score=32.63 Aligned_cols=134 Identities=13% Similarity=0.075 Sum_probs=72.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHH------HccCCCCEEEEeCCCCCccccCccccccccccccc
Q 014724 148 ELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYT------AILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (419)
Q Consensus 148 ~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~------all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g 221 (419)
.++.++...+..+++++-..-.| |++.|-..|+.-++. ++++.+..--.+...-.+....+ .....-.+
T Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 504 (1082)
T PLN02672 430 RFRNLIAGFMRIYHHIPLTPDNV-VVFPSRAVAIENALRLFSPRLAIVDEHLTRWLPKKWLTSLAIEN----ATSDSKSD 504 (1082)
T ss_pred HHHHHHHHHHHHhcCCcCCccce-EEeccHHHHHHHHHHhhChHHHhhhhhhhccCCHHHHhHhhhhc----ccccCccC
Confidence 56667778888888887543223 455566677755543 33444422211100000000000 00011111
Q ss_pred cccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCChHHHHHHHHHhCCEEEEecccccccc
Q 014724 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLV 293 (419)
Q Consensus 222 ~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~ 293 (419)
..+.++.-+ .. -|.+.+++++.+|++|+++.-.+-+ ..-++.|.+.+++.|++++.|++..+.+.
T Consensus 505 ~~~~~~~~~-----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 571 (1082)
T PLN02672 505 DVITVIEAP-----RQ--SDLVIELIKKLKPQVVVTGMADFEMRTSTAFEHLLNVTAEIGARLFLDISDHLELS 571 (1082)
T ss_pred CeEEEEeCC-----Cc--chHHHHHHHhCCCeEEEEeccchhhhhHHHHHHHHHHHHhhCcEEEEehhhheeec
Confidence 112222211 11 2467788888899999987644432 23578899999999999999998655543
No 413
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=43.04 E-value=68 Score=29.17 Aligned_cols=60 Identities=12% Similarity=0.087 Sum_probs=44.2
Q ss_pred cccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCCcCChHHHHHHHHHhC----CEEEEec
Q 014724 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG----ALLMMDM 286 (419)
Q Consensus 222 ~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~~~dl~~I~~ia~~~g----a~livD~ 286 (419)
.+|+++.+.. .+..+++.+.+.+.+|.+|.++.+.......++++.+..++.+ +.+++=.
T Consensus 111 ~G~~vi~LG~-----~vp~e~~v~~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~~~~~~~~v~i~vGG 174 (197)
T TIGR02370 111 NGFDVIDLGR-----DVPIDTVVEKVKKEKPLMLTGSALMTTTMYGQKDINDKLKEEGYRDSVKFMVGG 174 (197)
T ss_pred CCcEEEECCC-----CCCHHHHHHHHHHcCCCEEEEccccccCHHHHHHHHHHHHHcCCCCCCEEEEEC
Confidence 4467777543 3778999999988899999998877666666788888888774 4555543
No 414
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=42.50 E-value=68 Score=31.52 Aligned_cols=54 Identities=17% Similarity=0.204 Sum_probs=37.5
Q ss_pred CCCCCHHHHHHHhhhc-----CCeEEEEcCCCCCC--cCChHHHHHHHHHhCCEEEEeccc
Q 014724 235 TGLVDYDMLEKTAILF-----RPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAH 288 (419)
Q Consensus 235 ~~~iD~d~Le~~l~~~-----~pklIi~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah 288 (419)
...++.+++++.++.. +-.+|+++.|--+. ...+.+|.++|++.|+.++.|...
T Consensus 108 Gp~is~~~~~~~l~~~~~~l~~~d~VvlsGSlP~g~~~d~y~~li~~~~~~g~~vilD~Sg 168 (310)
T COG1105 108 GPEISEAELEQFLEQLKALLESDDIVVLSGSLPPGVPPDAYAELIRILRQQGAKVILDTSG 168 (310)
T ss_pred CCCCCHHHHHHHHHHHHHhcccCCEEEEeCCCCCCCCHHHHHHHHHHHHhcCCeEEEECCh
Confidence 3467777777765432 23467777643322 345899999999999999999873
No 415
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=41.65 E-value=71 Score=29.06 Aligned_cols=60 Identities=12% Similarity=0.021 Sum_probs=41.8
Q ss_pred cccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCCcCChHHHHHHHHHhC----CEEEEec
Q 014724 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG----ALLMMDM 286 (419)
Q Consensus 222 ~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~~~dl~~I~~ia~~~g----a~livD~ 286 (419)
.+++++.+.. .+..+++.+.+.+.+|.+|.++.+.......++++.+..++.+ +.+++=.
T Consensus 109 ~G~~vi~lG~-----~~p~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~lr~~~~~~~~~i~vGG 172 (201)
T cd02070 109 NGFEVIDLGR-----DVPPEEFVEAVKEHKPDILGLSALMTTTMGGMKEVIEALKEAGLRDKVKVMVGG 172 (201)
T ss_pred CCCEEEECCC-----CCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHCCCCcCCeEEEEC
Confidence 3457666543 3678999998888899999988766665566777777777654 4455433
No 416
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=41.44 E-value=17 Score=34.52 Aligned_cols=28 Identities=14% Similarity=0.291 Sum_probs=24.6
Q ss_pred CCCCCcCChHHHHHHHHHhCCEEEEecc
Q 014724 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (419)
Q Consensus 260 s~~p~~~dl~~I~~ia~~~ga~livD~a 287 (419)
|.+++..++++|++.||++|+.||.|.+
T Consensus 46 ~~~Gt~~d~~~Lv~~~h~~gi~VilD~V 73 (316)
T PF00128_consen 46 PRFGTMEDFKELVDAAHKRGIKVILDVV 73 (316)
T ss_dssp TTTBHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred cccchhhhhhhhhhccccccceEEEeee
Confidence 4566677899999999999999999997
No 417
>cd00984 DnaB_C DnaB helicase C terminal domain. The hexameric helicase DnaB unwinds the DNA duplex at the chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis.
Probab=41.09 E-value=77 Score=29.24 Aligned_cols=48 Identities=8% Similarity=0.057 Sum_probs=31.1
Q ss_pred CCCHHHHHHHhh----hcCCeEEEEcCCCC---C--CcCC-------hHHHHHHHHHhCCEEEE
Q 014724 237 LVDYDMLEKTAI----LFRPKLIIAGASAY---P--RDFD-------YPRMRQIADAVGALLMM 284 (419)
Q Consensus 237 ~iD~d~Le~~l~----~~~pklIi~~~s~~---p--~~~d-------l~~I~~ia~~~ga~liv 284 (419)
.+++++|++.+. ++++++|++++-.. + .... +..|.++|+++|+.+++
T Consensus 105 ~~~~~~l~~~i~~~~~~~~~~~vvID~l~~l~~~~~~~~~~~~~~~~~~~L~~la~~~~~~ii~ 168 (242)
T cd00984 105 SLTVSDIRSRARRLKKEHGLGLIVIDYLQLMSGSKKKGNRQQEVAEISRSLKLLAKELNVPVIA 168 (242)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEcCchhcCCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEE
Confidence 467777776654 34789999875221 1 1111 46788899999987766
No 418
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=40.85 E-value=64 Score=32.43 Aligned_cols=57 Identities=19% Similarity=0.348 Sum_probs=42.2
Q ss_pred CCC-CCHHHHHHHhhh----cCCeEEEE--cCCCCCC----cCChHHHHHHHHHhCCEEEEecccccc
Q 014724 235 TGL-VDYDMLEKTAIL----FRPKLIIA--GASAYPR----DFDYPRMRQIADAVGALLMMDMAHISG 291 (419)
Q Consensus 235 ~~~-iD~d~Le~~l~~----~~pklIi~--~~s~~p~----~~dl~~I~~ia~~~ga~livD~ah~~G 291 (419)
+|. .++++++.+++. .+++++++ |.+.||+ ..|+..|..+-++++..+++|..|..|
T Consensus 232 ~G~~~t~~e~~~Ave~i~~~Gn~~i~L~erg~s~yp~~~~~~ldl~~i~~lk~~~~~PV~~d~~Hs~G 299 (360)
T PRK12595 232 RGLSATIEEFIYAAEYIMSQGNGQIILCERGIRTYEKATRNTLDISAVPILKQETHLPVMVDVTHSTG 299 (360)
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCCEEEECCccCCCCCCCCCCcCHHHHHHHHHHhCCCEEEeCCCCCc
Confidence 554 688888777643 23567766 5566663 258899998888899999999999876
No 419
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=38.79 E-value=85 Score=30.42 Aligned_cols=59 Identities=20% Similarity=0.200 Sum_probs=39.7
Q ss_pred CCCHHHHHHHhhhcCCeEEEEcCCCCC---CcCC-----------hHHHHHHHHHhCCEEEEeccccccccccCCc
Q 014724 237 LVDYDMLEKTAILFRPKLIIAGASAYP---RDFD-----------YPRMRQIADAVGALLMMDMAHISGLVAASVV 298 (419)
Q Consensus 237 ~iD~d~Le~~l~~~~pklIi~~~s~~p---~~~d-----------l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~ 298 (419)
.-|.+.+++.+++.+|.+||......- ...+ ...|+++|+++|+++|.=. .+.+|.|..
T Consensus 36 itd~~~v~~~i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVhiS---TDyVFDG~~ 108 (281)
T COG1091 36 ITDPDAVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGARLVHIS---TDYVFDGEK 108 (281)
T ss_pred ccChHHHHHHHHhhCCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEEee---cceEecCCC
Confidence 468899999999889999986542211 1111 2569999999999987532 344555443
No 420
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=37.02 E-value=25 Score=36.67 Aligned_cols=28 Identities=11% Similarity=0.114 Sum_probs=26.1
Q ss_pred CCCCCcCChHHHHHHHHHhCCEEEEecc
Q 014724 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (419)
Q Consensus 260 s~~p~~~dl~~I~~ia~~~ga~livD~a 287 (419)
|.+++..|+++|++-||++|+.||.|.+
T Consensus 75 ~~fGt~~dl~~Li~~~H~~Gi~vi~D~V 102 (479)
T PRK09441 75 TKYGTKEELLNAIDALHENGIKVYADVV 102 (479)
T ss_pred cCcCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 6788888999999999999999999998
No 421
>COG1435 Tdk Thymidine kinase [Nucleotide transport and metabolism]
Probab=36.52 E-value=2e+02 Score=26.39 Aligned_cols=97 Identities=12% Similarity=0.162 Sum_probs=49.4
Q ss_pred Ch-HHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhc-C--
Q 014724 176 SG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-R-- 251 (419)
Q Consensus 176 sG-t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~-~-- 251 (419)
|| |+.+.......-..|-+|++..|..-.-+..+ ...+..|...+.+.++ -+.|-++.....+ +
T Consensus 15 SGKT~eLl~r~~~~~~~g~~v~vfkp~iD~R~~~~-----~V~Sr~G~~~~A~~i~-------~~~~i~~~i~~~~~~~~ 82 (201)
T COG1435 15 SGKTEELLRRARRYKEAGMKVLVFKPAIDTRYGVG-----KVSSRIGLSSEAVVIP-------SDTDIFDEIAALHEKPP 82 (201)
T ss_pred CcchHHHHHHHHHHHHcCCeEEEEecccccccccc-----eeeeccCCcccceecC-------ChHHHHHHHHhcccCCC
Confidence 45 44555555555556778887766532222211 1223445544444432 1122222222211 1
Q ss_pred CeEEEEcCCCCCCcCChHHHHHHHHHhCCEEEE
Q 014724 252 PKLIIAGASAYPRDFDYPRMRQIADAVGALLMM 284 (419)
Q Consensus 252 pklIi~~~s~~p~~~dl~~I~~ia~~~ga~liv 284 (419)
...|.++...+-...-+..+.+++++.|+.||+
T Consensus 83 ~~~v~IDEaQF~~~~~v~~l~~lad~lgi~Vi~ 115 (201)
T COG1435 83 VDCVLIDEAQFFDEELVYVLNELADRLGIPVIC 115 (201)
T ss_pred cCEEEEehhHhCCHHHHHHHHHHHhhcCCEEEE
Confidence 457777765543333367788888888888876
No 422
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=35.86 E-value=99 Score=26.21 Aligned_cols=53 Identities=15% Similarity=0.097 Sum_probs=35.0
Q ss_pred cccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCCcCChHHHHHHHHHhC
Q 014724 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG 279 (419)
Q Consensus 222 ~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~~~dl~~I~~ia~~~g 279 (419)
.+|+++.... ...++++-+.+.+.++.+|.++.....+....+++.+..++.|
T Consensus 29 ~GfeVi~lg~-----~~s~e~~v~aa~e~~adii~iSsl~~~~~~~~~~~~~~L~~~g 81 (132)
T TIGR00640 29 LGFDVDVGPL-----FQTPEEIARQAVEADVHVVGVSSLAGGHLTLVPALRKELDKLG 81 (132)
T ss_pred CCcEEEECCC-----CCCHHHHHHHHHHcCCCEEEEcCchhhhHHHHHHHHHHHHhcC
Confidence 4467766432 3667777777777789999888654444444677777777664
No 423
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=34.99 E-value=1.8e+02 Score=27.17 Aligned_cols=108 Identities=11% Similarity=0.195 Sum_probs=53.1
Q ss_pred EecCChHHHHHHHHHHccCCCCEE---EEeCCCCC-ccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHh
Q 014724 172 VQPLSGSPANFEVYTAILKPHDRI---MGLDLPHG-GHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTA 247 (419)
Q Consensus 172 V~~~sGt~A~~~~~~all~pGD~V---l~~~~~~~-g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l 247 (419)
++.++|-..+.+++.++- .|..| ++..|..+ ++..|..............++..+....+ ....-..++|.+++
T Consensus 5 aL~SGGKDS~~Al~~a~~-~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~~~~-g~~e~eve~L~~~l 82 (223)
T COG2102 5 ALYSGGKDSFYALYLALE-EGHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTFDTS-GEEEREVEELKEAL 82 (223)
T ss_pred EEEecCcHHHHHHHHHHH-cCCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEEecC-ccchhhHHHHHHHH
Confidence 556777778887777763 44433 23333322 22222211100011111222233332221 11234567777777
Q ss_pred hhcCCeEEEEcCCCCCCcCChHHHHHHHHHhCCEEE
Q 014724 248 ILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLM 283 (419)
Q Consensus 248 ~~~~pklIi~~~s~~p~~~dl~~I~~ia~~~ga~li 283 (419)
+.-+...|+.+.- .+ ..-..++-.+|++.|+.++
T Consensus 83 ~~l~~d~iv~GaI-~s-~yqk~rve~lc~~lGl~~~ 116 (223)
T COG2102 83 RRLKVDGIVAGAI-AS-EYQKERVERLCEELGLKVY 116 (223)
T ss_pred HhCcccEEEEchh-hh-HHHHHHHHHHHHHhCCEEe
Confidence 6555557777652 21 1235788899999887553
No 424
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=34.94 E-value=95 Score=29.54 Aligned_cols=58 Identities=16% Similarity=0.277 Sum_probs=41.4
Q ss_pred CC-CCCHHHHHHHhhh----cCCeEEEE--cCCCCCC----cCChHHHHHHHHHhCCEEEEeccccccc
Q 014724 235 TG-LVDYDMLEKTAIL----FRPKLIIA--GASAYPR----DFDYPRMRQIADAVGALLMMDMAHISGL 292 (419)
Q Consensus 235 ~~-~iD~d~Le~~l~~----~~pklIi~--~~s~~p~----~~dl~~I~~ia~~~ga~livD~ah~~Gl 292 (419)
+| ..++++++..++. ...+++++ |.+.|+. ..|+..|..+.++.+..|++|-+|..|.
T Consensus 129 ~G~~~t~~e~~~A~e~i~~~Gn~~i~L~eRg~~~Y~~~~~n~~dl~ai~~lk~~~~lPVivd~SHs~G~ 197 (250)
T PRK13397 129 RGLMATIEEYLGALSYLQDTGKSNIILCERGVRGYDVETRNMLDIMAVPIIQQKTDLPIIVDVSHSTGR 197 (250)
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCeEEEEccccCCCCCccccccCHHHHHHHHHHhCCCeEECCCCCCcc
Confidence 45 6788888776643 23566665 4455653 4578888888888999999999998663
No 425
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=34.20 E-value=1.2e+02 Score=28.90 Aligned_cols=57 Identities=14% Similarity=0.284 Sum_probs=40.6
Q ss_pred CCC-CCHHHHHHHhhhc----CCeEEEE--cCCCC-CC---cCChHHHHHHHHHhCCEEEEecccccc
Q 014724 235 TGL-VDYDMLEKTAILF----RPKLIIA--GASAY-PR---DFDYPRMRQIADAVGALLMMDMAHISG 291 (419)
Q Consensus 235 ~~~-iD~d~Le~~l~~~----~pklIi~--~~s~~-p~---~~dl~~I~~ia~~~ga~livD~ah~~G 291 (419)
+|. .++++++.+++.. ...++++ +.+.| |. ..|+..|..+.+.++..|+.|..|..|
T Consensus 139 ~G~~~t~~e~~~Ave~i~~~Gn~~i~l~~rG~s~y~~~~~~~~dl~~i~~lk~~~~~pV~~ds~Hs~G 206 (260)
T TIGR01361 139 RGMGNTIEEWLYAAEYILSSGNGNVILCERGIRTFEKATRNTLDLSAVPVLKKETHLPIIVDPSHAAG 206 (260)
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCcEEEEECCCCCCCCCCcCCcCHHHHHHHHHhhCCCEEEcCCCCCC
Confidence 453 4888887776532 2455554 35566 53 468899999988889999999999766
No 426
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=33.88 E-value=91 Score=31.25 Aligned_cols=58 Identities=21% Similarity=0.303 Sum_probs=40.2
Q ss_pred CCC-CCHHHHHHHhhh----cCCeEEEEcC------CCCCC-cCChHHHHHHHHHhCCEEEEeccccccc
Q 014724 235 TGL-VDYDMLEKTAIL----FRPKLIIAGA------SAYPR-DFDYPRMRQIADAVGALLMMDMAHISGL 292 (419)
Q Consensus 235 ~~~-iD~d~Le~~l~~----~~pklIi~~~------s~~p~-~~dl~~I~~ia~~~ga~livD~ah~~Gl 292 (419)
+|. .+++++...++. .+.+++++.- +.|++ ..|+..|..+.+.++..+|+|.+|+.|.
T Consensus 215 ~G~~~t~ee~~~A~e~i~~~Gn~~viL~erG~rtf~s~y~~~~~dl~ai~~lk~~~~lPVi~DpsH~~G~ 284 (352)
T PRK13396 215 RGMAATIDEWLMAAEYILAAGNPNVILCERGIRTFDRQYTRNTLDLSVIPVLRSLTHLPIMIDPSHGTGK 284 (352)
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCeEEEEecCCccCcCCCCCCCcCHHHHHHHHHhhCCCEEECCcccCCc
Confidence 443 488887766543 2456665532 24553 4689999999777899999999998773
No 427
>PLN02673 quinolinate synthetase A
Probab=32.88 E-value=3.6e+02 Score=29.61 Aligned_cols=98 Identities=12% Similarity=0.022 Sum_probs=47.0
Q ss_pred cChhHHHHHHHHHHHhhhcccccccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCC
Q 014724 86 ADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDE 165 (419)
Q Consensus 86 ~~~~~~~~~~~e~~r~~~~i~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~ 165 (419)
=|++..+-|.+.++ +++-+ |-..+|..++|.+. ......+|.+++.| |.|+ ++ +.+++.-..+.
T Consensus 254 p~~~~v~eI~~lkk-ek~av--ILAH~Yq~pEVQ~i-ADa~~~~~p~~~vG----------DSL~-LA-~~A~~~~~~~a 317 (724)
T PLN02673 254 PEESKVEELVNVLK-EKKIG--VVAHFYMDPEVQGV-LTAAQKHWPHISIS----------DSLI-MA-DSAVKMAKAGC 317 (724)
T ss_pred CCHHHHHHHHHHHH-hcCcE--EEEecCCCHHHHHH-hhhhhcccCCCeec----------cHHH-HH-HHHHHhccCCC
Confidence 34444454444433 22333 24688999999554 44444566665443 3555 33 23322223343
Q ss_pred CCCceeEecCChHHHHHHHHHHccCCC----CEE-EEeCCCCCc
Q 014724 166 NKWGVNVQPLSGSPANFEVYTAILKPH----DRI-MGLDLPHGG 204 (419)
Q Consensus 166 ~~~~v~V~~~sGt~A~~~~~~all~pG----D~V-l~~~~~~~g 204 (419)
+ +++..|..=|--....+++|. .+| +.+++.-|+
T Consensus 318 ~-----~IVFcGV~FMAEtA~kIL~p~~~~~k~V~llPd~~AGC 356 (724)
T PLN02673 318 Q-----FITVLGVDFMSENVRAILDQAGFGEVGVYRMSNERIGC 356 (724)
T ss_pred C-----EEEEeceeeHHhhHHHhcCCCccCCceEEeCCCCCCCC
Confidence 2 334455432222233466774 356 466654433
No 428
>COG3414 SgaB Phosphotransferase system, galactitol-specific IIB component [Carbohydrate transport and metabolism]
Probab=32.81 E-value=2e+02 Score=22.95 Aligned_cols=68 Identities=12% Similarity=0.211 Sum_probs=39.1
Q ss_pred eEEEEcCCCCCCcCCh-HHHHHHHHHhCCEEEEeccccccccccCCcCCCCCCCcEEEeCCC--CcCC-CCCeeEEEEe
Q 014724 253 KLIIAGASAYPRDFDY-PRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTH--KSLR-GPRGGMIFFK 327 (419)
Q Consensus 253 klIi~~~s~~p~~~dl-~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~~~Div~~S~h--K~l~-GprgG~i~~~ 327 (419)
|++++|...-++..=+ .++.++++++|+-.-+|..+ .+.. ....+++|+++.|.| +.|. .|. |+++.-
T Consensus 3 KIL~aCG~GvgSS~~ik~kve~~l~~~gi~~~~~~~~-v~~~-----~~~~~~aDiiv~s~~l~~~~~~~~~-~~v~~~ 74 (93)
T COG3414 3 KILAACGNGVGSSTMIKMKVEEVLKELGIDVDVEQCA-VDEI-----KALTDGADIIVTSTKLADEFEDIPK-GYVVIT 74 (93)
T ss_pred EEEEECCCCccHHHHHHHHHHHHHHHcCCCceeeeEE-eccc-----ccCCCcccEEEEehHhhhhcCcCCC-ceEEEE
Confidence 6677766544432222 57889999999874444443 2221 122337899988876 5563 344 555443
No 429
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=30.93 E-value=95 Score=28.68 Aligned_cols=53 Identities=11% Similarity=0.099 Sum_probs=39.5
Q ss_pred cccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCCcCChHHHHHHHHHhC
Q 014724 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG 279 (419)
Q Consensus 222 ~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~~~dl~~I~~ia~~~g 279 (419)
.+++++.+.. .+.++++.+.+.+.+|.+|.++...+.+....+++.+..++.+
T Consensus 115 ~G~~Vi~LG~-----~vp~e~~v~~~~~~~~~~V~lS~~~~~~~~~~~~~i~~L~~~~ 167 (213)
T cd02069 115 NGYEVIDLGV-----MVPIEKILEAAKEHKADIIGLSGLLVPSLDEMVEVAEEMNRRG 167 (213)
T ss_pred CCCEEEECCC-----CCCHHHHHHHHHHcCCCEEEEccchhccHHHHHHHHHHHHhcC
Confidence 4467777654 3778999999988899999998766666566777777777664
No 430
>cd00248 Mth938-like Mth938-like domain. The members of this family include: Mth938, 2P1, Xcr35, Rpa2829, and several uncharacterized sequences. Mth938 is a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. This protein crystallizes as a dimer, although it is monomeric in solution, with one disulfide bond in each monomer. 2P1 is a partially characterized nuclear protein which is homologous to E3-3 from rat and known to be alternately spliced. Xcr35 and Rpa2829 are hypothetical proteins of unknown function from the Xanthomonas campestris and Rhodopseudomonas palustris genomes, respectively, for which the crystal structures have been determined.
Probab=30.63 E-value=1.8e+02 Score=23.69 Aligned_cols=50 Identities=20% Similarity=0.141 Sum_probs=36.8
Q ss_pred CCCHHHHHHHhhhcCCeEEEEcCCCCCCcCChHHHHHHHHHhCCEEEEecc
Q 014724 237 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMA 287 (419)
Q Consensus 237 ~iD~d~Le~~l~~~~pklIi~~~s~~p~~~dl~~I~~ia~~~ga~livD~a 287 (419)
.++.++|+..+...+|.+|+++.-.... ..-+++.+..+++|+-+-+-..
T Consensus 38 ~l~~~~l~~~~~~~~peiliiGTG~~~~-~~~~~~~~~l~~~gI~vE~m~T 87 (109)
T cd00248 38 DLDPEALLPLLAEDRPDILLIGTGAEIA-FLPRALRAALRAAGIGVEVMST 87 (109)
T ss_pred cCCHHHHHHHHhhCCCCEEEEcCCCCCC-cCCHHHHHHHHHcCCeEEEeCc
Confidence 5899999998875248999998766553 3447788888899987665443
No 431
>PF01248 Ribosomal_L7Ae: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family; InterPro: IPR004038 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, ribosomal protein L30 from eukaryotes and archaebacteria, Gadd45 and MyD118 [].; PDB: 2CZW_A 3V7E_B 2QEX_F 1YJ9_F 1VQ8_F 1YJN_F 3I56_F 1VQ6_F 2OTJ_F 1YIJ_F ....
Probab=30.04 E-value=1.1e+02 Score=23.81 Aligned_cols=45 Identities=11% Similarity=0.090 Sum_probs=31.9
Q ss_pred HHHHHHHhhhcCCeEEEEcCCCCCCcCChHH-HHHHHHHhCCEEEEec
Q 014724 240 YDMLEKTAILFRPKLIIAGASAYPRDFDYPR-MRQIADAVGALLMMDM 286 (419)
Q Consensus 240 ~d~Le~~l~~~~pklIi~~~s~~p~~~dl~~-I~~ia~~~ga~livD~ 286 (419)
+.++.+.++..+.++|++.....+ ..... |..+|+++++.++.=.
T Consensus 20 ~~~v~k~l~~~~~~lvilA~d~~~--~~~~~~l~~~c~~~~Ip~~~~~ 65 (95)
T PF01248_consen 20 IKEVLKALKKGKAKLVILAEDCSP--DSIKKHLPALCEEKNIPYVFVP 65 (95)
T ss_dssp HHHHHHHHHTTCESEEEEETTSSS--GHHHHHHHHHHHHTTEEEEEES
T ss_pred hHHHHHHHHcCCCcEEEEcCCCCh--hhhcccchhheeccceeEEEEC
Confidence 466777777667888888754443 34566 8899999998876544
No 432
>cd05560 Xcc1710_like Xcc1710_like family, specific to proteobacteria. Xcc1710 is a hypothetical protein from Xanthomonas campestris pv. campestris str. ATCC 33913, similar to Mth938, a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. Their three-dimensional structures have been determined, but their functions are unknown.
Probab=28.96 E-value=1.9e+02 Score=23.60 Aligned_cols=49 Identities=18% Similarity=0.097 Sum_probs=36.6
Q ss_pred CCCHHHHHHHhhhcCCeEEEEcCCCCCCcCChHHHHHHHHHhCCEEEEecc
Q 014724 237 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMA 287 (419)
Q Consensus 237 ~iD~d~Le~~l~~~~pklIi~~~s~~p~~~dl~~I~~ia~~~ga~livD~a 287 (419)
.++.++|+.++.. +|.+|+++.-.+.... -.++.+.++++|+-+-+-..
T Consensus 39 ~l~~e~l~~l~~~-~peiliiGTG~~~~~~-~~~~~~~l~~~gi~vE~m~T 87 (109)
T cd05560 39 DLTAAHFEALLAL-QPEVILLGTGERQRFP-PPALLAPLLARGIGVEVMDT 87 (109)
T ss_pred cCCHHHHHHHHhc-CCCEEEEecCCCCCcC-CHHHHHHHHHcCCeEEEECH
Confidence 5899999998875 7999999875555332 47888888889987665443
No 433
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=28.61 E-value=86 Score=26.31 Aligned_cols=43 Identities=21% Similarity=0.245 Sum_probs=22.2
Q ss_pred CCHHHH----HHHhhhcCCeEEEEcCCCCCCcCChHHHHHHHHHhCCEEEEe
Q 014724 238 VDYDML----EKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMD 285 (419)
Q Consensus 238 iD~d~L----e~~l~~~~pklIi~~~s~~p~~~dl~~I~~ia~~~ga~livD 285 (419)
+|.+.- ++++. .++-+||+.... .+.+.+.++|+++++.|+.=
T Consensus 65 l~~~~r~~~l~~l~~-~~~P~iIvt~~~----~~p~~l~e~a~~~~ipll~t 111 (127)
T PF02603_consen 65 LDEEERKERLEKLFS-YNPPCIIVTRGL----EPPPELIELAEKYNIPLLRT 111 (127)
T ss_dssp S-HHHHCCHHHHHCT-TT-S-EEEETTT-------HHHHHHHHHCT--EEEE
T ss_pred CCHHHHHHHHHHHhC-CCCCEEEEECcC----CCCHHHHHHHHHhCCcEEEc
Confidence 555444 44443 355555554422 45689999999999888753
No 434
>PF03437 BtpA: BtpA family; InterPro: IPR005137 Photosystem I (PSI) is a large protein complex embedded within the photosynthetic thylakoid membrane. It consists of 11 subunits, ~100 chlorophyll a molecules, 2 phylloquinones, and 3 Fe4S4-clusters. The three dimensional structure of the PSI complex has been resolved at 2.5 A [], which allows the precise localisation of each cofactor. PSI together with photosystem II (PSII) catalyses the light-induced steps in oxygenic photosynthesis - a process found in cyanobacteria, eukaryotic algae (e.g. red algae, green algae) and higher plants. To date, three thylakoid proteins involved in the stable accumulation of PSI have been identified: BtpA [], Ycf3 [, ], and Ycf4 (IPR003359 from INTERPRO) []. Because translation of the psaA and psaB mRNAs encoding the two reaction centre polypeptides, of PSI and PSII respectively, is not affected in mutant strains lacking functional ycf3 and ycf4, the products of these two genes appear to act at a post-translational step of PSI biosynthesis. These gene products are therefore involved either in the stabilisation or in the assembly of the PSI complex. However, their exact roles remain unknown. The BtpA protein appears to act at the level of PSI stabilisation []. It is an extrinsic membrane protein located on the cytoplasmic side of the thylakoid membrane [, ]. Homologs of BtpA are found in the crenarchaeota and euryarchaeota, where their function remains unknown. The Ycf4 protein is firmly associated with the thylakoid membrane, presumably through a transmembrane domain []. Ycf4 co-fractionates with a protein complex larger than PSI upon sucrose density gradient centrifugation of solubilised thylakoids []. The Ycf3 protein is loosely associated with the thylakoid membrane and can be released from the membrane with sodium carbonate. This suggests that Ycf3 is not part of a stable complex and that it probably interacts transiently with its partners []. Ycf3 contains a number of tetratrico peptide repeats (TPR, IPR001440 from INTERPRO); TPR is a structural motif present in a wide range of proteins, which mediates protein-protein interactions.
Probab=27.43 E-value=71 Score=30.48 Aligned_cols=71 Identities=15% Similarity=0.235 Sum_probs=44.3
Q ss_pred CHHHHH-HHhhhcCCeEEEEcCCCCCCcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCCCCc-EEEeCCCC
Q 014724 239 DYDMLE-KTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCD-VVTTTTHK 314 (419)
Q Consensus 239 D~d~Le-~~l~~~~pklIi~~~s~~p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~~~D-iv~~S~hK 314 (419)
|+++.. ..+....+..|++..+.++...++++|.++.+..++.|++ .+|....... ..++.+| ++++|.=|
T Consensus 159 ~~~~~~~~a~~~~~aDaviVtG~~TG~~~~~~~l~~vr~~~~~PVlv----GSGvt~~Ni~-~~l~~ADG~IVGS~~K 231 (254)
T PF03437_consen 159 DLEEAAKDAVERGGADAVIVTGKATGEPPDPEKLKRVREAVPVPVLV----GSGVTPENIA-EYLSYADGAIVGSYFK 231 (254)
T ss_pred CHHHHHHHHHHhcCCCEEEECCcccCCCCCHHHHHHHHhcCCCCEEE----ecCCCHHHHH-HHHHhCCEEEEeeeee
Confidence 344443 3334457889999888888778888888888877777776 3465432210 1123577 55555445
No 435
>cd02065 B12-binding_like B12 binding domain (B12-BD). Most of the members bind different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide. This domain is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins. Not all members of this family contain the conserved binding motif.
Probab=27.25 E-value=1.7e+02 Score=23.59 Aligned_cols=52 Identities=12% Similarity=-0.005 Sum_probs=35.1
Q ss_pred CCHHHHHHHhhhcCCeEEEEcCCCCCCcCChHHHHHHHHHhC--CEEEEecccc
Q 014724 238 VDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG--ALLMMDMAHI 289 (419)
Q Consensus 238 iD~d~Le~~l~~~~pklIi~~~s~~p~~~dl~~I~~ia~~~g--a~livD~ah~ 289 (419)
...+.+.+.+.+.+|++|.++.........++.+.++.++++ +.+++=..|.
T Consensus 37 ~~~~~~~~~i~~~~pdiV~iS~~~~~~~~~~~~~~~~~~~~p~~~~ivvGG~~~ 90 (125)
T cd02065 37 VPPEEIVEAAKEEDADVVGLSALSTTHMEAMKLVIEALKELGIDIPVVVGGAHP 90 (125)
T ss_pred CCHHHHHHHHHHcCCCEEEEecchHhHHHHHHHHHHHHHhcCCCCeEEEeCCcC
Confidence 456667667766789999887654433345677777777774 7777766543
No 436
>TIGR03569 NeuB_NnaB N-acetylneuraminate synthase. This family is a subset of the Pfam model pfam03102 and is believed to include only authentic NeuB N-acetylneuraminate (sialic acid) synthase enzymes. The majority of the genes identified by this model are observed adjacent to both the NeuA and NeuC genes which together effect the biosynthesis of CMP-N-acetylneuraminate from UDP-N-acetylglucosamine.
Probab=26.22 E-value=93 Score=30.89 Aligned_cols=90 Identities=20% Similarity=0.303 Sum_probs=55.7
Q ss_pred CCCCCHHHHHHHhhh---c-CC--eEE-EEcCCCCCC---cCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC-
Q 014724 235 TGLVDYDMLEKTAIL---F-RP--KLI-IAGASAYPR---DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK- 303 (419)
Q Consensus 235 ~~~iD~d~Le~~l~~---~-~p--klI-i~~~s~~p~---~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~- 303 (419)
+|.-+++++++.++. . .+ +++ +.|.+.||+ ..++..|..+.++++..|... -|..|....- -.+.
T Consensus 140 tGmatl~Ei~~Av~~i~~~G~~~~~i~llhC~s~YP~~~~~~nL~~I~~Lk~~f~~pVG~S-dHt~G~~~~~---aAval 215 (329)
T TIGR03569 140 TGMATLEEIEAAVGVLRDAGTPDSNITLLHCTTEYPAPFEDVNLNAMDTLKEAFDLPVGYS-DHTLGIEAPI---AAVAL 215 (329)
T ss_pred CCCCCHHHHHHHHHHHHHcCCCcCcEEEEEECCCCCCCcccCCHHHHHHHHHHhCCCEEEC-CCCccHHHHH---HHHHc
Confidence 455577777766542 2 23 244 457778885 357899999999999777653 4777743110 0011
Q ss_pred CCcEE--EeCCCCcCCCCCeeEEEEeC
Q 014724 304 YCDVV--TTTTHKSLRGPRGGMIFFKK 328 (419)
Q Consensus 304 ~~Div--~~S~hK~l~GprgG~i~~~~ 328 (419)
|++++ -++..|++.||...+-+.++
T Consensus 216 GA~iIEkH~tldk~~~G~D~~~Sl~p~ 242 (329)
T TIGR03569 216 GATVIEKHFTLDKNLPGPDHKASLEPD 242 (329)
T ss_pred CCCEEEeCCChhhcCCCCChhhcCCHH
Confidence 77865 57888999888765444343
No 437
>PRK13602 putative ribosomal protein L7Ae-like; Provisional
Probab=24.25 E-value=1.4e+02 Score=23.02 Aligned_cols=44 Identities=14% Similarity=0.014 Sum_probs=30.5
Q ss_pred HHHHHHHhhhcCCeEEEEcCCCCCCcCChHHHHHHHHHhCCEEEEe
Q 014724 240 YDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMD 285 (419)
Q Consensus 240 ~d~Le~~l~~~~pklIi~~~s~~p~~~dl~~I~~ia~~~ga~livD 285 (419)
.++..+.+++.+.++|++..-.-+ .-.+.|..+|+++++.++.-
T Consensus 16 ~~~v~kai~~gkaklViiA~D~~~--~~~~~i~~~c~~~~Vp~~~~ 59 (82)
T PRK13602 16 TKQTVKALKRGSVKEVVVAEDADP--RLTEKVEALANEKGVPVSKV 59 (82)
T ss_pred HHHHHHHHHcCCeeEEEEECCCCH--HHHHHHHHHHHHcCCCEEEE
Confidence 456667777667888888653222 23578999999999877543
No 438
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=24.13 E-value=1.5e+02 Score=31.21 Aligned_cols=54 Identities=17% Similarity=0.177 Sum_probs=37.8
Q ss_pred CCCCHHHHHHHhhhcCCeEEEEcCCCCCCcCChHHHHHHHHHh--CCEEEEeccccc
Q 014724 236 GLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAV--GALLMMDMAHIS 290 (419)
Q Consensus 236 ~~iD~d~Le~~l~~~~pklIi~~~s~~p~~~dl~~I~~ia~~~--ga~livD~ah~~ 290 (419)
..++.+++.+.+.+.+|.+|.++.. .+......++++++++. ++.+++=..|.+
T Consensus 48 ~~~~~~~~~~~l~~~~pdvVgis~~-t~~~~~a~~~~~~~k~~~P~~~iV~GG~h~t 103 (497)
T TIGR02026 48 GPLTDEKLVERLRAHCPDLVLITAI-TPAIYIACETLKFARERLPNAIIVLGGIHPT 103 (497)
T ss_pred cCCCHHHHHHHHHhcCcCEEEEecC-cccHHHHHHHHHHHHHHCCCCEEEEcCCCcC
Confidence 3567788888887778998887642 33333456777778876 888888777643
No 439
>PLN00196 alpha-amylase; Provisional
Probab=23.97 E-value=56 Score=33.69 Aligned_cols=28 Identities=14% Similarity=0.275 Sum_probs=24.7
Q ss_pred CCCCCcCChHHHHHHHHHhCCEEEEecc
Q 014724 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (419)
Q Consensus 260 s~~p~~~dl~~I~~ia~~~ga~livD~a 287 (419)
+.+++..+++++++-||++|+-||.|.+
T Consensus 86 ~~fGt~~elk~Lv~~aH~~GIkVilDvV 113 (428)
T PLN00196 86 SKYGNEAQLKSLIEAFHGKGVQVIADIV 113 (428)
T ss_pred ccCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 4667777899999999999999999987
No 440
>PRK00945 acetyl-CoA decarbonylase/synthase complex subunit epsilon; Provisional
Probab=23.74 E-value=2.5e+02 Score=25.11 Aligned_cols=63 Identities=16% Similarity=0.135 Sum_probs=40.6
Q ss_pred CCCHHHHHHHhhhcCCeEEEEcCCCCCCcCChHHHHHHHHHhCCEEEEeccccccccccCCcC
Q 014724 237 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (419)
Q Consensus 237 ~iD~d~Le~~l~~~~pklIi~~~s~~p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~ 299 (419)
.+.++.+.+++.+-+--+|+++.-......-.+++.+++++.++.++.=.-.+-+++..|..+
T Consensus 21 ~~~p~~aa~lI~~AKrPlIivG~ga~~~~ea~e~l~elaEkl~iPVvtT~~~~~~~~~kgv~~ 83 (171)
T PRK00945 21 IVSPKIAAMMIKKAKRPLLVVGSLLLDDEELLDRAVKIAKKANIPVAATGGSYKGLIDKGVDA 83 (171)
T ss_pred ccCHHHHHHHHHhCCCcEEEECcCccccchHHHHHHHHHHHHCCCEEEccccccccccCCccC
Confidence 568888888887543336666653322123468899999999999887654345555554443
No 441
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=23.35 E-value=1.5e+02 Score=23.73 Aligned_cols=32 Identities=13% Similarity=0.089 Sum_probs=21.8
Q ss_pred eEEEEcCCCCCCcCChHHHHHHHHHhCCEEEE
Q 014724 253 KLIIAGASAYPRDFDYPRMRQIADAVGALLMM 284 (419)
Q Consensus 253 klIi~~~s~~p~~~dl~~I~~ia~~~ga~liv 284 (419)
+-|++.-|-.....+.++|.++|+++|..+++
T Consensus 87 ~~v~~EKP~~~~~~~~~~l~~~a~~~~~~~~V 118 (120)
T PF01408_consen 87 KHVLVEKPLALTLEEAEELVEAAKEKGVKVMV 118 (120)
T ss_dssp SEEEEESSSSSSHHHHHHHHHHHHHHTSCEEE
T ss_pred CEEEEEcCCcCCHHHHHHHHHHHHHhCCEEEE
Confidence 35556655554556677888888888877765
No 442
>CHL00073 chlN photochlorophyllide reductase subunit N
Probab=22.74 E-value=1.5e+02 Score=30.94 Aligned_cols=53 Identities=21% Similarity=0.295 Sum_probs=34.6
Q ss_pred CHHHHHHHh----hhcCCeEEEEcCCCCC--CcCChHHHHHHH-HHhCCEEEEecccccccc
Q 014724 239 DYDMLEKTA----ILFRPKLIIAGASAYP--RDFDYPRMRQIA-DAVGALLMMDMAHISGLV 293 (419)
Q Consensus 239 D~d~Le~~l----~~~~pklIi~~~s~~p--~~~dl~~I~~ia-~~~ga~livD~ah~~Gl~ 293 (419)
+.++|.+.+ ++++|++|++-.+..+ .-.|++.+++-+ +++|+.||. ++..|+-
T Consensus 81 ~~~~L~~~i~ei~~~~~p~~ifv~~TC~t~iIGdDle~va~~~~~~~gipVV~--v~~~Gf~ 140 (457)
T CHL00073 81 DYEELKRLCLQIKKDRNPSVIVWIGTCTTEIIKMDLEGMAPKLEAEIGIPIVV--ARANGLD 140 (457)
T ss_pred CHHHHHHHHHHHHHhCCCCEEEEEccCcHHhhccCHHHHHHHHHHhhCCCEEE--EeCCCcc
Confidence 455665554 4567998887665555 246899997655 478998886 3345554
No 443
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=22.56 E-value=77 Score=34.29 Aligned_cols=34 Identities=21% Similarity=0.260 Sum_probs=28.3
Q ss_pred EEEcCCCCCCcCChHHHHHHHHHhCCEEEEeccc
Q 014724 255 IIAGASAYPRDFDYPRMRQIADAVGALLMMDMAH 288 (419)
Q Consensus 255 Ii~~~s~~p~~~dl~~I~~ia~~~ga~livD~ah 288 (419)
...-.+.|++..|++++++-||+.|+-||+|-++
T Consensus 203 ~yAp~sryGtPedfk~fVD~aH~~GIgViLD~V~ 236 (628)
T COG0296 203 YYAPTSRYGTPEDFKALVDAAHQAGIGVILDWVP 236 (628)
T ss_pred eccccccCCCHHHHHHHHHHHHHcCCEEEEEecC
Confidence 3334456778889999999999999999999974
No 444
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=22.05 E-value=5.6e+02 Score=24.46 Aligned_cols=87 Identities=20% Similarity=0.203 Sum_probs=0.0
Q ss_pred EecCChHH-HHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhc
Q 014724 172 VQPLSGSP-ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF 250 (419)
Q Consensus 172 V~~~sGt~-A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~ 250 (419)
|...+||. |...+=.-...+++.++..--.+++.+.. ...+..+ .|..+.+.|.+.+++.
T Consensus 5 ilvlGGT~Dar~la~~L~~~~~~~~~ss~t~~g~~l~~----------------~~~~~~~---~G~l~~e~l~~~l~e~ 65 (257)
T COG2099 5 ILLLGGTSDARALAKKLAAAPVDIILSSLTGYGAKLAE----------------QIGPVRV---GGFLGAEGLAAFLREE 65 (257)
T ss_pred EEEEeccHHHHHHHHHhhccCccEEEEEcccccccchh----------------ccCCeee---cCcCCHHHHHHHHHHc
Q ss_pred CCeEEEEcCCCCCCcCCh-----HHHHHHHHHhCCEEE
Q 014724 251 RPKLIIAGASAYPRDFDY-----PRMRQIADAVGALLM 283 (419)
Q Consensus 251 ~pklIi~~~s~~p~~~dl-----~~I~~ia~~~ga~li 283 (419)
+.++||=-+ .|+ +...++|++.|+..+
T Consensus 66 ~i~llIDAT------HPyAa~iS~Na~~aake~gipy~ 97 (257)
T COG2099 66 GIDLLIDAT------HPYAARISQNAARAAKETGIPYL 97 (257)
T ss_pred CCCEEEECC------ChHHHHHHHHHHHHHHHhCCcEE
No 445
>TIGR00789 flhB_rel flhB C-terminus-related protein. This model describes a short protein (80-93 residues) homologous to the C-terminus of the flagellar biosynthetic protein FlhB. It is found so far only in species that also have FlhB. In a phylogenetic tree based on alignment of both this family and the homologous region of FlhB and its homologs, the members of this family form a monophyletic set.
Probab=21.94 E-value=75 Score=24.69 Aligned_cols=20 Identities=25% Similarity=0.272 Sum_probs=18.3
Q ss_pred hHHHHHHHHHhCCEEEEecc
Q 014724 268 YPRMRQIADAVGALLMMDMA 287 (419)
Q Consensus 268 l~~I~~ia~~~ga~livD~a 287 (419)
-++|+++|+++|+.++.|..
T Consensus 29 A~~I~~~A~e~~VPi~~~~~ 48 (82)
T TIGR00789 29 AERIIEIAKKHGIPIVEDPD 48 (82)
T ss_pred HHHHHHHHHHcCCCEEeCHH
Confidence 47899999999999999986
No 446
>KOG2792 consensus Putative cytochrome C oxidase assembly protein [Energy production and conversion]
Probab=21.78 E-value=1.1e+02 Score=29.11 Aligned_cols=37 Identities=16% Similarity=0.229 Sum_probs=24.6
Q ss_pred CHHHHHHHhhhcCCeEEEEcCCCCCCcCChHHHHHHHHHhCCEE
Q 014724 239 DYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALL 282 (419)
Q Consensus 239 D~d~Le~~l~~~~pklIi~~~s~~p~~~dl~~I~~ia~~~ga~l 282 (419)
+.+.+.+.++++.||++=+. ...++|.++|++|-+|+
T Consensus 190 ~~~~~~eY~~eF~pkllGLT-------GT~eqvk~vak~yRVYf 226 (280)
T KOG2792|consen 190 SVEVVAEYVSEFHPKLLGLT-------GTTEQVKQVAKKYRVYF 226 (280)
T ss_pred CHHHHHHHHHhcChhhhccc-------CCHHHHHHHHHHhEEee
Confidence 45566666666666665332 23688999999988765
No 447
>PRK10785 maltodextrin glucosidase; Provisional
Probab=21.59 E-value=66 Score=34.71 Aligned_cols=27 Identities=22% Similarity=0.277 Sum_probs=22.8
Q ss_pred CCCCcCChHHHHHHHHHhCCEEEEecc
Q 014724 261 AYPRDFDYPRMRQIADAVGALLMMDMA 287 (419)
Q Consensus 261 ~~p~~~dl~~I~~ia~~~ga~livD~a 287 (419)
.+++..|+++|++-||+.|+.||.|.+
T Consensus 221 ~~Gt~~df~~Lv~~aH~rGikVilD~V 247 (598)
T PRK10785 221 QLGGDAALLRLRHATQQRGMRLVLDGV 247 (598)
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 445556789999999999999999997
No 448
>PLN02361 alpha-amylase
Probab=21.37 E-value=73 Score=32.53 Aligned_cols=28 Identities=18% Similarity=0.179 Sum_probs=25.1
Q ss_pred CCCCCcCChHHHHHHHHHhCCEEEEecc
Q 014724 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (419)
Q Consensus 260 s~~p~~~dl~~I~~ia~~~ga~livD~a 287 (419)
+.+++..+++++++-||++|+.+|.|.+
T Consensus 70 ~~~Gt~~el~~li~~~h~~gi~vi~D~V 97 (401)
T PLN02361 70 SAYGSEHLLKSLLRKMKQYNVRAMADIV 97 (401)
T ss_pred cccCCHHHHHHHHHHHHHcCCEEEEEEc
Confidence 5677778899999999999999999997
No 449
>cd05565 PTS_IIB_lactose PTS_IIB_lactose: subunit IIB of enzyme II (EII) of the lactose-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS) found in Firmicutes as well as Actinobacteria. In this system, EII is a lactose-specific permease with two cytoplasmic domains (IIA and IIB) and a transmembrane channel IIC domain. The IIC and IIB domains are expressed as a single protein from the lac operon. The IIB domain fold includes a central four-stranded parallel open twisted beta-sheet flanked by alpha-helices on both sides. The seven major PTS systems with this IIB fold include lactose, chitobiose/lichenan, ascorbate, galactitol, mannitol, fructose, and a sensory system with similarity to the bacterial bgl system.
Probab=21.16 E-value=1.6e+02 Score=23.71 Aligned_cols=55 Identities=13% Similarity=0.060 Sum_probs=32.8
Q ss_pred eEEEEcCCCCCCcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCCCCcEEEeCCC
Q 014724 253 KLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTH 313 (419)
Q Consensus 253 klIi~~~s~~p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~~~Div~~S~h 313 (419)
+++++|....++..=.+++.+.|+++|+-+-+...-... .+...++.|+++.+.+
T Consensus 2 ~Ill~C~~GaSSs~la~km~~~a~~~gi~~~i~a~~~~e------~~~~~~~~Dvill~PQ 56 (99)
T cd05565 2 NVLVLCAGGGTSGLLANALNKGAKERGVPLEAAAGAYGS------HYDMIPDYDLVILAPQ 56 (99)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEEeeHHH------HHHhccCCCEEEEcCh
Confidence 355666544443334689999999999876666542211 1222346788776543
No 450
>PF13481 AAA_25: AAA domain; PDB: 1G8Y_J 1OLO_A 1NLF_C.
Probab=20.81 E-value=1.3e+02 Score=26.40 Aligned_cols=46 Identities=15% Similarity=0.322 Sum_probs=25.4
Q ss_pred CHHHHHHHhhh-cCCeEEEEcCCCC--C-Cc-------CChHHHHHHHHHhCCEEEE
Q 014724 239 DYDMLEKTAIL-FRPKLIIAGASAY--P-RD-------FDYPRMRQIADAVGALLMM 284 (419)
Q Consensus 239 D~d~Le~~l~~-~~pklIi~~~s~~--p-~~-------~dl~~I~~ia~~~ga~liv 284 (419)
+++.+++.+.+ +++++||+++-.. + .. .-+..+.++|+++|+.+++
T Consensus 128 ~~~~l~~~~~~~~~~~lvviD~l~~~~~~~~~~~~~~~~~~~~l~~la~~~~~~vi~ 184 (193)
T PF13481_consen 128 DLEELEAALKELYGPDLVVIDPLQSLHDGDENSNSAVAQLMQELKRLAKEYGVAVIL 184 (193)
T ss_dssp HHHHHHHHHTT----SEEEEE-GGGG--S-TT-HHHHHHHHHHHHHHHHHH--EEEE
T ss_pred HHHHHHHHHhhcCCCcEEEEcCHHHHhcCCCCCHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 35677787776 6789999874211 1 11 1246788899999976654
No 451
>COG0386 BtuE Glutathione peroxidase [Posttranslational modification, protein turnover, chaperones]
Probab=20.57 E-value=1.4e+02 Score=26.21 Aligned_cols=54 Identities=13% Similarity=0.133 Sum_probs=37.7
Q ss_pred CCCCHHHHHHHhhhcCCe-EEEEcCCCCCC----cCChHHHHHHHHH-hCCEE-EEecccc
Q 014724 236 GLVDYDMLEKTAILFRPK-LIIAGASAYPR----DFDYPRMRQIADA-VGALL-MMDMAHI 289 (419)
Q Consensus 236 ~~iD~d~Le~~l~~~~pk-lIi~~~s~~p~----~~dl~~I~~ia~~-~ga~l-ivD~ah~ 289 (419)
+..-|+.||.+.++++-+ ++|++.|+|-. ..+-++|.++|.. ||+-+ +.+-++.
T Consensus 39 fTpQYegLe~Ly~ky~~~Gf~VLgFPcNQF~~QEPg~~eEI~~fC~~~YgVtFp~f~Ki~V 99 (162)
T COG0386 39 FTPQYEGLEALYKKYKDKGFEVLGFPCNQFGGQEPGSDEEIAKFCQLNYGVTFPMFSKIDV 99 (162)
T ss_pred CcHhHHHHHHHHHHHhhCCcEEEeccccccccCCCCCHHHHHHHHHhccCceeeeeeEEee
Confidence 356789999998877654 78899888753 3578999999985 56533 3444433
No 452
>TIGR01306 GMP_reduct_2 guanosine monophosphate reductase, bacterial. A deep split separates two families of GMP reductase. The other (TIGR01305) is found in eukaryotic and some proteobacterial lineages, including E. coli, while this family is found in a variety of bacterial lineages.
Probab=20.56 E-value=1.2e+02 Score=29.89 Aligned_cols=8 Identities=13% Similarity=0.015 Sum_probs=4.3
Q ss_pred CCcEEEeC
Q 014724 304 YCDVVTTT 311 (419)
Q Consensus 304 ~~Div~~S 311 (419)
++|.+..+
T Consensus 158 Gad~I~V~ 165 (321)
T TIGR01306 158 GADATKVG 165 (321)
T ss_pred CcCEEEEC
Confidence 66755433
No 453
>PRK09505 malS alpha-amylase; Reviewed
Probab=20.56 E-value=75 Score=34.89 Aligned_cols=26 Identities=15% Similarity=0.243 Sum_probs=22.3
Q ss_pred CCCcCChHHHHHHHHHhCCEEEEecc
Q 014724 262 YPRDFDYPRMRQIADAVGALLMMDMA 287 (419)
Q Consensus 262 ~p~~~dl~~I~~ia~~~ga~livD~a 287 (419)
+++..|++++++-||++|+.||.|.+
T Consensus 288 ~Gt~~dfk~Lv~~aH~~Gi~VilD~V 313 (683)
T PRK09505 288 MGTEADLRTLVDEAHQRGIRILFDVV 313 (683)
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 34455789999999999999999987
No 454
>PRK10933 trehalose-6-phosphate hydrolase; Provisional
Probab=20.53 E-value=74 Score=33.95 Aligned_cols=28 Identities=21% Similarity=0.353 Sum_probs=24.1
Q ss_pred CCCCCcCChHHHHHHHHHhCCEEEEecc
Q 014724 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (419)
Q Consensus 260 s~~p~~~dl~~I~~ia~~~ga~livD~a 287 (419)
+.+++..|++++++.||++|+.||.|.+
T Consensus 75 ~~~Gt~~d~~~lv~~~h~~gi~vilD~V 102 (551)
T PRK10933 75 PTYGTLDDFDELVAQAKSRGIRIILDMV 102 (551)
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 4566667899999999999999999987
No 455
>PF13378 MR_MLE_C: Enolase C-terminal domain-like; PDB: 3FCP_B 3P0W_D 3VFC_A 3VDG_A 3FJ4_B 3CT2_B 3DGB_A 3V3W_A 3V4B_A 3NO1_E ....
Probab=20.39 E-value=1.2e+02 Score=24.35 Aligned_cols=50 Identities=12% Similarity=0.059 Sum_probs=36.7
Q ss_pred CCCHHHHHHHhhhcCCeEEEEcCCCCCCcCChHHHHHHHHHhCCEEEEec
Q 014724 237 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDM 286 (419)
Q Consensus 237 ~iD~d~Le~~l~~~~pklIi~~~s~~p~~~dl~~I~~ia~~~ga~livD~ 286 (419)
..++.+++++++..-..++-+.....+......+++++|+++|+.+..=.
T Consensus 4 ~~~~~~~~~li~~~a~d~~~~~~~~~GGit~~~~i~~~A~~~gi~~~~h~ 53 (111)
T PF13378_consen 4 LFSLHDFRRLIEAGAVDIVQIDPTRCGGITEALRIAALAEAHGIPVMPHS 53 (111)
T ss_dssp SSSHHHHHHHHHTTSCSEEEEBHHHHTSHHHHHHHHHHHHHTT-EEEEBS
T ss_pred CCCHHHHHHHHHcCCCCEEEeCchhcCCHHHHHHHHHHHHHhCCCEEecC
Confidence 45778888888764556777765555555678899999999999888766
Done!