Query 014724
Match_columns 419
No_of_seqs 298 out of 2513
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 16:41:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014724.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014724hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ou5_A Serine hydroxymethyltra 100.0 4.8E-80 1.7E-84 616.3 30.0 339 77-415 29-376 (490)
2 2a7v_A Serine hydroxymethyltra 100.0 1.8E-57 6.3E-62 469.5 28.3 339 77-415 29-376 (490)
3 1rv3_A Serine hydroxymethyltra 100.0 6.3E-51 2.2E-55 421.4 31.3 341 75-415 17-366 (483)
4 3h7f_A Serine hydroxymethyltra 100.0 1.3E-42 4.5E-47 355.4 31.1 322 79-415 22-348 (447)
5 3n0l_A Serine hydroxymethyltra 100.0 3.9E-40 1.3E-44 331.6 32.9 320 81-415 4-323 (417)
6 3gbx_A Serine hydroxymethyltra 100.0 3.7E-38 1.3E-42 317.1 30.0 319 83-414 11-329 (420)
7 3ecd_A Serine hydroxymethyltra 100.0 4.4E-38 1.5E-42 317.0 30.0 324 77-414 7-330 (425)
8 2vi8_A Serine hydroxymethyltra 100.0 1.3E-34 4.4E-39 290.2 31.8 318 81-413 2-319 (405)
9 2dkj_A Serine hydroxymethyltra 100.0 1.8E-34 6.2E-39 289.3 32.1 316 84-413 5-320 (407)
10 3hvy_A Cystathionine beta-lyas 99.9 6E-26 2E-30 230.5 27.0 292 85-412 15-340 (427)
11 3i16_A Aluminum resistance pro 99.9 2.4E-25 8.1E-30 226.2 23.8 290 88-412 20-340 (427)
12 3zrp_A Serine-pyruvate aminotr 99.9 1.7E-24 5.9E-29 214.3 24.0 275 105-413 4-308 (384)
13 3nnk_A Ureidoglycine-glyoxylat 99.9 3.3E-24 1.1E-28 214.6 25.3 276 103-412 13-330 (411)
14 3isl_A Purine catabolism prote 99.9 6.3E-24 2.2E-28 212.9 26.5 276 103-412 11-330 (416)
15 2dr1_A PH1308 protein, 386AA l 99.9 9.1E-24 3.1E-28 209.4 26.5 273 105-412 22-321 (386)
16 3tqx_A 2-amino-3-ketobutyrate 99.9 5.6E-24 1.9E-28 212.1 24.4 277 103-413 44-336 (399)
17 3jzl_A Putative cystathionine 99.9 1.1E-23 3.9E-28 212.8 26.7 292 89-412 7-323 (409)
18 2huf_A Alanine glyoxylate amin 99.9 5.3E-24 1.8E-28 212.0 23.3 276 103-412 19-323 (393)
19 1vjo_A Alanine--glyoxylate ami 99.9 1.5E-23 5E-28 209.1 24.5 272 104-411 35-334 (393)
20 3f9t_A TDC, L-tyrosine decarbo 99.9 6.1E-23 2.1E-27 203.5 28.9 280 106-413 34-347 (397)
21 1iug_A Putative aspartate amin 99.9 1.1E-23 3.8E-28 206.2 22.9 268 105-412 3-290 (352)
22 3f0h_A Aminotransferase; RER07 99.9 1.5E-23 5.1E-28 207.6 23.9 275 102-410 18-314 (376)
23 3kgw_A Alanine-glyoxylate amin 99.9 1E-23 3.5E-28 209.3 22.4 276 103-412 23-328 (393)
24 2yrr_A Aminotransferase, class 99.9 2E-23 6.9E-28 204.0 23.5 273 105-412 2-294 (353)
25 1u08_A Hypothetical aminotrans 99.9 4.9E-23 1.7E-27 205.1 26.0 303 81-413 10-328 (386)
26 1kmj_A Selenocysteine lyase; p 99.9 7E-23 2.4E-27 204.2 26.6 283 104-412 24-340 (406)
27 1bs0_A Protein (8-amino-7-oxon 99.9 2.8E-23 9.5E-28 206.6 23.6 275 103-412 40-326 (384)
28 2z9v_A Aspartate aminotransfer 99.9 5E-23 1.7E-27 204.9 24.6 269 109-412 15-311 (392)
29 1gd9_A Aspartate aminotransfer 99.9 3.4E-23 1.2E-27 206.3 23.2 303 80-412 4-326 (389)
30 3cai_A Possible aminotransfera 99.9 5.6E-23 1.9E-27 205.7 24.8 284 104-412 27-343 (406)
31 2ch1_A 3-hydroxykynurenine tra 99.9 3.9E-23 1.3E-27 206.0 23.4 274 104-412 19-323 (396)
32 1b5p_A Protein (aspartate amin 99.9 4.9E-23 1.7E-27 205.5 24.0 304 80-413 5-329 (385)
33 1fc4_A 2-amino-3-ketobutyrate 99.9 2.9E-23 9.9E-28 207.6 22.1 274 103-412 46-336 (401)
34 1m32_A 2-aminoethylphosphonate 99.9 4E-23 1.4E-27 202.8 22.1 275 104-412 5-306 (366)
35 3ht4_A Aluminum resistance pro 99.9 2.3E-23 7.8E-28 212.0 20.9 297 85-412 9-329 (431)
36 3fvs_A Kynurenine--oxoglutarat 99.9 6.4E-23 2.2E-27 206.5 23.9 307 79-413 6-346 (422)
37 2w8t_A SPT, serine palmitoyltr 99.9 8.8E-23 3E-27 206.8 24.9 274 104-412 66-354 (427)
38 3dzz_A Putative pyridoxal 5'-p 99.9 2.8E-23 9.5E-28 206.5 20.7 280 103-413 28-330 (391)
39 3e2y_A Kynurenine-oxoglutarate 99.9 4.5E-23 1.5E-27 206.7 22.3 308 81-414 3-340 (410)
40 3ly1_A Putative histidinol-pho 99.9 1.1E-22 3.7E-27 199.9 24.1 270 102-413 16-301 (354)
41 2o0r_A RV0858C (N-succinyldiam 99.9 1.1E-22 3.7E-27 204.6 24.5 303 80-413 4-325 (411)
42 3h14_A Aminotransferase, class 99.9 1E-22 3.5E-27 203.2 24.0 280 102-413 31-322 (391)
43 3get_A Histidinol-phosphate am 99.9 5.7E-23 1.9E-27 202.9 21.8 271 102-413 30-315 (365)
44 1v2d_A Glutamine aminotransfer 99.9 9.8E-23 3.4E-27 202.6 23.5 297 80-413 4-316 (381)
45 3lvm_A Cysteine desulfurase; s 99.9 1.3E-22 4.5E-27 204.1 24.7 284 101-411 20-324 (423)
46 2bkw_A Alanine-glyoxylate amin 99.9 6.9E-23 2.3E-27 203.0 21.9 278 103-412 5-324 (385)
47 3euc_A Histidinol-phosphate am 99.9 1.5E-22 5.1E-27 200.1 24.0 270 102-412 30-314 (367)
48 1t3i_A Probable cysteine desul 99.9 3.3E-22 1.1E-26 200.4 26.8 283 104-412 29-348 (420)
49 3ffh_A Histidinol-phosphate am 99.9 3.8E-22 1.3E-26 196.9 26.5 269 102-413 32-314 (363)
50 3kki_A CAI-1 autoinducer synth 99.9 8.6E-23 2.9E-27 205.2 22.0 291 84-413 24-344 (409)
51 2x5d_A Probable aminotransfera 99.9 7.9E-23 2.7E-27 205.7 21.3 304 80-412 11-336 (412)
52 4dq6_A Putative pyridoxal phos 99.9 1.3E-22 4.4E-27 201.7 22.4 280 102-413 32-334 (391)
53 3hbx_A GAD 1, glutamate decarb 99.9 5.1E-22 1.7E-26 205.9 27.7 279 112-413 66-382 (502)
54 1j32_A Aspartate aminotransfer 99.9 2.7E-22 9.2E-27 199.7 24.3 281 102-412 30-329 (388)
55 2e7j_A SEP-tRNA:Cys-tRNA synth 99.9 5.2E-23 1.8E-27 203.1 19.0 274 104-412 9-308 (371)
56 3kax_A Aminotransferase, class 99.9 7.7E-23 2.6E-27 202.7 20.3 281 103-414 25-327 (383)
57 1yiz_A Kynurenine aminotransfe 99.9 5.5E-22 1.9E-26 200.4 26.8 305 80-413 16-354 (429)
58 3b46_A Aminotransferase BNA3; 99.9 1.4E-22 4.8E-27 206.7 22.3 300 86-413 33-369 (447)
59 2dou_A Probable N-succinyldiam 99.9 1.5E-22 5.3E-27 200.8 21.6 296 86-412 4-320 (376)
60 1o4s_A Aspartate aminotransfer 99.9 1.5E-22 5.3E-27 202.2 21.7 276 102-412 41-334 (389)
61 4hvk_A Probable cysteine desul 99.9 2.3E-22 7.7E-27 198.4 22.6 272 110-412 8-297 (382)
62 1c7n_A Cystalysin; transferase 99.9 2.6E-22 8.9E-27 200.6 22.6 281 103-413 32-334 (399)
63 3l8a_A METC, putative aminotra 99.9 1.7E-22 5.9E-27 204.1 21.2 283 102-413 61-363 (421)
64 1elu_A L-cysteine/L-cystine C- 99.9 1E-22 3.5E-27 202.1 18.9 284 104-412 17-337 (390)
65 4eb5_A Probable cysteine desul 99.9 4.6E-22 1.6E-26 196.9 23.0 275 111-412 9-297 (382)
66 2o1b_A Aminotransferase, class 99.9 7.5E-23 2.6E-27 205.7 17.5 283 103-412 48-344 (404)
67 3dr4_A Putative perosamine syn 99.9 1.1E-22 3.8E-27 203.0 18.4 273 102-413 22-314 (391)
68 3a2b_A Serine palmitoyltransfe 99.9 5.2E-22 1.8E-26 198.5 23.1 274 103-412 44-331 (398)
69 2z61_A Probable aspartate amin 99.9 3.7E-22 1.3E-26 197.6 21.3 275 102-412 29-314 (370)
70 1eg5_A Aminotransferase; PLP-d 99.9 1.7E-21 5.8E-26 192.7 25.9 275 112-412 11-300 (384)
71 3p1t_A Putative histidinol-pho 99.9 1.9E-21 6.4E-26 189.6 25.6 266 98-411 12-284 (337)
72 2gb3_A Aspartate aminotransfer 99.9 2.6E-22 8.9E-27 201.8 19.8 280 102-412 43-336 (409)
73 3g0t_A Putative aminotransfera 99.9 8.2E-22 2.8E-26 199.3 23.6 285 102-412 44-379 (437)
74 3nra_A Aspartate aminotransfer 99.9 2.2E-22 7.4E-27 201.3 18.7 283 104-413 41-346 (407)
75 3dyd_A Tyrosine aminotransfera 99.9 1.1E-21 3.9E-26 198.6 23.8 282 103-412 55-362 (427)
76 3ffr_A Phosphoserine aminotran 99.9 4E-22 1.4E-26 195.6 19.9 278 103-413 4-309 (362)
77 1b9h_A AHBA synthase, protein 99.9 2.2E-21 7.4E-26 193.3 24.8 264 114-413 15-299 (388)
78 1d2f_A MALY protein; aminotran 99.9 3.2E-21 1.1E-25 192.2 25.8 279 103-413 29-330 (390)
79 3vax_A Putative uncharacterize 99.9 3E-22 1E-26 199.8 18.4 283 103-412 20-324 (400)
80 3fdb_A Beta C-S lyase, putativ 99.9 1.9E-21 6.3E-26 192.5 23.8 280 102-414 23-319 (377)
81 3vp6_A Glutamate decarboxylase 99.9 5.2E-21 1.8E-25 198.7 27.6 254 144-414 131-431 (511)
82 3jtx_A Aminotransferase; NP_28 99.9 2.5E-21 8.7E-26 193.0 24.2 300 81-413 4-335 (396)
83 3ele_A Amino transferase; RER0 99.9 2.9E-21 9.9E-26 192.9 24.4 283 102-412 35-341 (398)
84 1xi9_A Putative transaminase; 99.9 4.9E-22 1.7E-26 199.5 18.8 285 102-413 38-343 (406)
85 2dgk_A GAD-beta, GADB, glutama 99.9 3.8E-21 1.3E-25 196.3 25.5 278 112-413 52-370 (452)
86 3cq5_A Histidinol-phosphate am 99.9 7.2E-21 2.4E-25 188.6 26.6 274 105-412 33-318 (369)
87 3piu_A 1-aminocyclopropane-1-c 99.9 2.9E-21 1E-25 195.7 23.2 281 104-413 40-367 (435)
88 3a9z_A Selenocysteine lyase; P 99.9 1E-21 3.4E-26 198.5 19.3 273 104-398 19-331 (432)
89 1mdo_A ARNB aminotransferase; 99.9 3.2E-21 1.1E-25 192.1 22.0 265 104-412 10-304 (393)
90 3ju7_A Putative PLP-dependent 99.9 1.1E-21 3.9E-26 196.0 18.2 242 114-394 14-272 (377)
91 1o69_A Aminotransferase; struc 99.9 1.1E-20 3.7E-25 189.3 25.3 262 112-412 8-288 (394)
92 2zc0_A Alanine glyoxylate tran 99.9 8.7E-21 3E-25 190.0 23.9 304 80-413 8-343 (407)
93 3nyt_A Aminotransferase WBPE; 99.9 1.4E-21 4.8E-26 193.7 17.8 251 106-398 6-271 (367)
94 3mc6_A Sphingosine-1-phosphate 99.9 2.9E-21 1E-25 199.3 20.5 275 115-412 77-384 (497)
95 3aow_A Putative uncharacterize 99.9 8.2E-21 2.8E-25 193.9 23.5 304 79-413 54-385 (448)
96 1iay_A ACC synthase 2, 1-amino 99.9 1.4E-20 4.8E-25 190.1 24.7 281 104-413 38-362 (428)
97 3mad_A Sphingosine-1-phosphate 99.9 7.9E-20 2.7E-24 189.6 30.2 249 144-412 135-414 (514)
98 3ke3_A Putative serine-pyruvat 99.9 1.4E-20 4.7E-25 187.7 23.5 234 142-399 30-300 (379)
99 1jg8_A L-ALLO-threonine aldola 99.9 1.2E-21 4.2E-26 191.8 15.4 271 104-412 5-291 (347)
100 3ei9_A LL-diaminopimelate amin 99.9 4.2E-21 1.4E-25 194.2 19.7 307 79-412 26-370 (432)
101 3pj0_A LMO0305 protein; struct 99.9 1.7E-21 5.8E-26 191.7 16.3 272 100-413 11-298 (359)
102 3ezs_A Aminotransferase ASPB; 99.9 1.5E-20 5.2E-25 186.1 23.2 271 103-412 24-317 (376)
103 2bwn_A 5-aminolevulinate synth 99.9 1.9E-20 6.5E-25 187.3 23.7 272 105-412 49-338 (401)
104 2oga_A Transaminase; PLP-depen 99.9 6.7E-21 2.3E-25 191.0 20.4 253 103-398 31-300 (399)
105 3rq1_A Aminotransferase class 99.9 7.7E-21 2.6E-25 191.4 20.9 301 83-411 14-365 (418)
106 2r2n_A Kynurenine/alpha-aminoa 99.9 5.4E-20 1.8E-24 186.1 27.1 245 148-413 82-362 (425)
107 1vp4_A Aminotransferase, putat 99.9 3.1E-21 1.1E-25 195.1 17.9 281 102-413 43-358 (425)
108 1bw0_A TAT, protein (tyrosine 99.9 1.1E-20 3.9E-25 189.9 21.5 284 103-412 34-351 (416)
109 3qgu_A LL-diaminopimelate amin 99.9 8E-21 2.7E-25 193.2 20.4 280 103-412 70-382 (449)
110 3frk_A QDTB; aminotransferase, 99.9 1.7E-21 5.8E-26 193.2 15.1 251 106-398 7-272 (373)
111 3hdo_A Histidinol-phosphate am 99.9 1.5E-20 5.2E-25 185.5 21.7 266 102-412 26-301 (360)
112 2fnu_A Aminotransferase; prote 99.9 1.1E-20 3.8E-25 186.6 20.8 261 110-413 7-292 (375)
113 2c81_A Glutamine-2-deoxy-scyll 99.9 1.3E-20 4.3E-25 190.1 21.1 267 112-412 12-311 (418)
114 2c0r_A PSAT, phosphoserine ami 99.9 1.6E-21 5.6E-26 192.4 13.7 278 103-412 4-305 (362)
115 1v72_A Aldolase; PLP-dependent 99.9 2.1E-20 7.1E-25 183.2 21.5 274 103-412 8-302 (356)
116 1qz9_A Kynureninase; kynurenin 99.9 8.6E-21 2.9E-25 190.4 19.1 274 105-412 30-350 (416)
117 4e1o_A HDC, histidine decarbox 99.9 6.7E-20 2.3E-24 188.9 25.9 252 144-413 114-419 (481)
118 2po3_A 4-dehydrase; external a 99.9 1.9E-20 6.3E-25 189.3 21.1 265 107-412 21-304 (424)
119 2zyj_A Alpha-aminodipate amino 99.9 1.1E-20 3.8E-25 188.9 18.7 298 80-413 11-333 (397)
120 3t18_A Aminotransferase class 99.9 2.3E-20 7.7E-25 187.6 20.9 298 86-411 16-363 (413)
121 2aeu_A Hypothetical protein MJ 99.9 1.8E-20 6.1E-25 186.9 19.9 259 103-411 29-306 (374)
122 3b8x_A WBDK, pyridoxamine 5-ph 99.9 1.5E-19 5E-24 180.5 26.6 262 107-412 6-311 (390)
123 1wyu_B Glycine dehydrogenase s 99.9 9.9E-20 3.4E-24 187.2 25.6 268 114-411 78-381 (474)
124 3tcm_A Alanine aminotransferas 99.9 3.6E-20 1.2E-24 191.8 22.2 283 102-412 95-422 (500)
125 3e9k_A Kynureninase; kynurenin 99.9 2.6E-21 9E-26 198.0 13.4 241 152-412 115-408 (465)
126 3lws_A Aromatic amino acid bet 99.8 6.3E-21 2.2E-25 187.6 15.1 269 107-413 15-296 (357)
127 2okj_A Glutamate decarboxylase 99.8 1.9E-19 6.6E-24 186.3 27.0 239 144-399 128-412 (504)
128 3op7_A Aminotransferase class 99.8 4.9E-20 1.7E-24 182.5 21.3 233 155-412 70-314 (375)
129 2z67_A O-phosphoseryl-tRNA(SEC 99.8 6.3E-21 2.2E-25 195.2 14.6 278 110-411 88-388 (456)
130 4f4e_A Aromatic-amino-acid ami 99.8 1.9E-20 6.7E-25 188.9 17.7 309 80-411 25-376 (420)
131 3k40_A Aromatic-L-amino-acid d 99.8 8.8E-20 3E-24 187.8 22.8 257 143-413 108-412 (475)
132 3ftb_A Histidinol-phosphate am 99.8 9E-20 3.1E-24 179.3 21.5 264 102-413 26-306 (361)
133 3uwc_A Nucleotide-sugar aminot 99.8 3.1E-20 1.1E-24 183.7 18.0 254 104-398 8-275 (374)
134 3k7y_A Aspartate aminotransfer 99.8 5.6E-20 1.9E-24 185.6 20.0 305 81-412 6-361 (405)
135 2jis_A Cysteine sulfinic acid 99.8 3.7E-19 1.3E-23 184.8 26.5 240 144-400 144-428 (515)
136 1lc5_A COBD, L-threonine-O-3-p 99.8 2.2E-19 7.5E-24 177.4 23.3 266 103-412 25-305 (364)
137 1gc0_A Methionine gamma-lyase; 99.8 1.4E-19 4.7E-24 181.7 21.8 248 105-393 30-283 (398)
138 2x5f_A Aspartate_tyrosine_phen 99.8 7.7E-20 2.6E-24 184.8 19.6 286 102-412 47-376 (430)
139 3m5u_A Phosphoserine aminotran 99.8 5.3E-20 1.8E-24 182.9 17.9 272 103-412 5-303 (361)
140 2qma_A Diaminobutyrate-pyruvat 99.8 6.3E-19 2.2E-23 182.1 26.3 277 113-414 111-434 (497)
141 1svv_A Threonine aldolase; str 99.8 1.3E-19 4.5E-24 177.4 19.8 271 104-412 15-305 (359)
142 2vyc_A Biodegradative arginine 99.8 1E-19 3.5E-24 196.9 20.7 223 153-394 210-466 (755)
143 1fg7_A Histidinol phosphate am 99.8 2.9E-19 1E-23 176.5 22.0 229 154-412 64-305 (356)
144 1c4k_A Protein (ornithine deca 99.8 4E-20 1.4E-24 198.8 16.8 234 153-399 178-446 (730)
145 1qgn_A Protein (cystathionine 99.8 6.8E-19 2.3E-23 179.7 24.9 233 142-413 112-368 (445)
146 1js3_A DDC;, DOPA decarboxylas 99.8 8.6E-19 2.9E-23 180.5 25.2 273 115-412 87-414 (486)
147 2rfv_A Methionine gamma-lyase; 99.8 2.3E-19 7.9E-24 179.9 20.4 208 153-394 69-283 (398)
148 3qm2_A Phosphoserine aminotran 99.8 2.3E-21 7.8E-26 194.4 5.3 265 103-395 27-309 (386)
149 7aat_A Aspartate aminotransfer 99.8 2E-19 7E-24 179.8 19.5 306 83-412 7-358 (401)
150 3e77_A Phosphoserine aminotran 99.8 1.6E-20 5.4E-25 187.5 11.2 261 110-398 20-298 (377)
151 3if2_A Aminotransferase; YP_26 99.8 2.3E-19 7.7E-24 182.0 19.9 253 147-413 86-374 (444)
152 2fq6_A Cystathionine beta-lyas 99.8 3.3E-19 1.1E-23 180.5 20.8 212 142-393 80-300 (415)
153 1yaa_A Aspartate aminotransfer 99.8 9.5E-20 3.2E-24 183.0 16.3 303 81-411 6-365 (412)
154 1w23_A Phosphoserine aminotran 99.8 2E-20 6.8E-25 183.9 11.0 273 104-413 4-305 (360)
155 3ndn_A O-succinylhomoserine su 99.8 1.5E-18 5E-23 175.6 24.8 216 142-396 79-302 (414)
156 2ez2_A Beta-tyrosinase, tyrosi 99.8 7.2E-19 2.4E-23 179.1 22.4 267 105-412 45-350 (456)
157 3n75_A LDC, lysine decarboxyla 99.8 9.2E-20 3.1E-24 194.9 16.2 218 154-393 201-442 (715)
158 1e5e_A MGL, methionine gamma-l 99.8 8.6E-19 2.9E-23 176.6 22.2 215 142-394 60-282 (404)
159 3ri6_A O-acetylhomoserine sulf 99.8 5.8E-19 2E-23 179.5 21.0 223 142-396 80-323 (430)
160 3b1d_A Betac-S lyase; HET: PLP 99.7 9.3E-22 3.2E-26 196.5 0.0 280 103-413 32-334 (392)
161 4eu1_A Mitochondrial aspartate 99.8 1.6E-19 5.6E-24 181.3 16.2 302 80-411 17-365 (409)
162 3qhx_A Cystathionine gamma-syn 99.8 1.4E-18 4.7E-23 174.4 22.8 212 143-393 65-283 (392)
163 3fsl_A Aromatic-amino-acid ami 99.8 2.2E-19 7.5E-24 179.0 16.6 288 102-412 26-355 (397)
164 3asa_A LL-diaminopimelate amin 99.8 5.9E-19 2E-23 176.8 19.6 273 103-412 34-334 (400)
165 3ihj_A Alanine aminotransferas 99.8 8.6E-19 2.9E-23 181.4 20.9 272 113-412 101-421 (498)
166 1ajs_A Aspartate aminotransfer 99.8 5.7E-19 1.9E-23 177.2 18.7 308 81-411 7-365 (412)
167 3d6k_A Putative aminotransfera 99.8 4E-19 1.4E-23 179.5 17.1 300 79-413 10-357 (422)
168 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.8 4E-18 1.4E-22 173.0 23.3 186 110-329 37-235 (437)
169 1uu1_A Histidinol-phosphate am 99.8 1.7E-18 5.9E-23 169.1 19.6 259 103-413 20-290 (335)
170 3meb_A Aspartate aminotransfer 99.8 5.4E-18 1.9E-22 172.8 23.0 289 81-395 26-373 (448)
171 3ez1_A Aminotransferase MOCR f 99.8 2.1E-18 7.1E-23 173.8 19.4 298 82-413 6-354 (423)
172 3cog_A Cystathionine gamma-lya 99.8 1.8E-18 6.1E-23 174.3 18.5 212 143-393 66-284 (403)
173 2q7w_A Aspartate aminotransfer 99.8 5.8E-19 2E-23 175.9 14.6 286 102-411 26-353 (396)
174 3nmy_A Xometc, cystathionine g 99.8 7.8E-18 2.7E-22 169.5 22.5 213 142-393 65-285 (400)
175 3f6t_A Aspartate aminotransfer 99.8 5.1E-18 1.7E-22 177.1 21.2 285 104-413 105-451 (533)
176 3g7q_A Valine-pyruvate aminotr 99.8 1.6E-18 5.4E-23 173.9 16.1 287 102-413 31-348 (417)
177 2x3l_A ORN/Lys/Arg decarboxyla 99.8 7E-19 2.4E-23 179.6 13.6 232 153-412 62-301 (446)
178 3acz_A Methionine gamma-lyase; 99.8 5.7E-18 1.9E-22 169.6 19.5 214 143-394 58-277 (389)
179 1pff_A Methionine gamma-lyase; 99.8 6.8E-18 2.3E-22 164.3 19.4 207 154-393 4-217 (331)
180 2ay1_A Aroat, aromatic amino a 99.8 1.3E-18 4.5E-23 173.3 14.4 303 82-412 4-351 (394)
181 2cb1_A O-acetyl homoserine sul 99.8 5.6E-17 1.9E-21 163.5 25.7 218 153-398 61-306 (412)
182 4h51_A Aspartate aminotransfer 99.8 1.4E-17 4.8E-22 168.6 21.1 294 82-395 23-353 (420)
183 3fkd_A L-threonine-O-3-phospha 99.8 1.1E-17 3.7E-22 164.2 19.6 259 102-413 15-286 (350)
184 3ruy_A Ornithine aminotransfer 99.8 2.9E-17 9.8E-22 163.6 22.7 264 114-413 53-343 (392)
185 3ppl_A Aspartate aminotransfer 99.8 2.1E-17 7.2E-22 166.9 21.6 235 154-413 84-359 (427)
186 2eh6_A Acoat, acetylornithine 99.8 5.4E-17 1.8E-21 160.4 24.1 256 114-413 45-327 (375)
187 1cs1_A CGS, protein (cystathio 99.8 2.3E-17 7.7E-22 164.6 21.1 207 154-394 58-270 (386)
188 1ax4_A Tryptophanase; tryptoph 99.8 1.5E-17 5E-22 169.7 20.1 264 116-411 55-359 (467)
189 1vef_A Acetylornithine/acetyl- 99.8 2.1E-17 7.2E-22 164.8 20.3 276 104-413 47-345 (395)
190 1ibj_A CBL, cystathionine beta 99.8 2E-17 6.7E-22 169.8 20.2 203 103-342 90-304 (464)
191 2ctz_A O-acetyl-L-homoserine s 99.8 6.3E-17 2.2E-21 163.8 23.2 156 144-326 58-221 (421)
192 1n8p_A Cystathionine gamma-lya 99.8 1.8E-17 6.1E-22 166.4 17.9 205 153-394 60-275 (393)
193 2fyf_A PSAT, phosphoserine ami 99.8 1.6E-17 5.5E-22 166.2 17.3 270 102-412 39-340 (398)
194 2oqx_A Tryptophanase; lyase, p 99.7 9.8E-18 3.3E-22 171.0 15.3 265 116-412 53-361 (467)
195 2zy4_A L-aspartate beta-decarb 99.7 6.3E-17 2.2E-21 169.3 21.6 205 104-329 106-332 (546)
196 2oat_A Ornithine aminotransfer 99.7 5.3E-17 1.8E-21 165.2 20.3 271 103-413 77-384 (439)
197 4adb_A Succinylornithine trans 99.7 4.7E-17 1.6E-21 162.6 18.7 258 114-413 56-345 (406)
198 1s0a_A Adenosylmethionine-8-am 99.7 7.1E-16 2.4E-20 155.7 26.4 274 114-413 60-372 (429)
199 1wyu_A Glycine dehydrogenase ( 99.7 6.4E-17 2.2E-21 164.3 17.8 236 147-411 107-382 (438)
200 1z7d_A Ornithine aminotransfer 99.7 2.4E-16 8.1E-21 160.1 21.6 270 104-413 67-375 (433)
201 2ord_A Acoat, acetylornithine 99.7 8.1E-17 2.8E-21 160.8 17.2 258 114-413 57-344 (397)
202 2pb2_A Acetylornithine/succiny 99.7 1.7E-16 6E-21 160.3 19.5 270 103-413 58-363 (420)
203 2eo5_A 419AA long hypothetical 99.7 9.7E-16 3.3E-20 154.6 23.3 275 104-412 44-364 (419)
204 1sff_A 4-aminobutyrate aminotr 99.7 4.7E-16 1.6E-20 156.4 20.7 266 114-412 58-360 (426)
205 3bc8_A O-phosphoseryl-tRNA(SEC 99.7 4.5E-17 1.5E-21 165.0 12.6 239 142-399 92-347 (450)
206 3hl2_A O-phosphoseryl-tRNA(SEC 99.7 3.7E-17 1.3E-21 164.3 11.3 252 142-414 110-380 (501)
207 3i4j_A Aminotransferase, class 99.7 4E-15 1.4E-19 150.3 25.6 266 114-412 46-358 (430)
208 3a8u_X Omega-amino acid--pyruv 99.7 1.2E-15 4.2E-20 155.0 21.1 267 114-413 67-390 (449)
209 3dxv_A Alpha-amino-epsilon-cap 99.7 4.2E-15 1.4E-19 150.5 23.8 274 104-411 45-360 (439)
210 3nx3_A Acoat, acetylornithine 99.7 5E-15 1.7E-19 147.7 23.2 267 104-413 38-342 (395)
211 3l44_A Glutamate-1-semialdehyd 99.7 1E-14 3.5E-19 147.5 24.2 271 103-412 56-365 (434)
212 2epj_A Glutamate-1-semialdehyd 99.7 6.8E-15 2.3E-19 148.9 22.0 273 103-413 57-367 (434)
213 3fq8_A Glutamate-1-semialdehyd 99.7 3.1E-14 1.1E-18 143.6 26.4 267 103-412 53-362 (427)
214 1zod_A DGD, 2,2-dialkylglycine 99.6 1.2E-14 4E-19 146.8 22.7 271 114-412 60-366 (433)
215 3n5m_A Adenosylmethionine-8-am 99.6 7E-14 2.4E-18 142.2 27.6 262 104-392 51-360 (452)
216 2e7u_A Glutamate-1-semialdehyd 99.6 1.3E-14 4.4E-19 146.3 21.5 272 104-413 54-363 (424)
217 3tfu_A Adenosylmethionine-8-am 99.6 1.2E-14 4.2E-19 148.6 21.3 283 103-413 76-401 (457)
218 2cy8_A D-phgat, D-phenylglycin 99.6 1.1E-14 3.9E-19 148.1 20.7 271 103-413 58-367 (453)
219 3k28_A Glutamate-1-semialdehyd 99.6 1.7E-14 5.8E-19 145.8 21.6 253 103-393 54-340 (429)
220 3gju_A Putative aminotransfera 99.6 1.2E-13 4.1E-18 141.0 28.0 274 114-412 68-390 (460)
221 3dod_A Adenosylmethionine-8-am 99.6 5.4E-14 1.9E-18 143.0 24.5 264 114-413 61-380 (448)
222 4e77_A Glutamate-1-semialdehyd 99.6 9.8E-14 3.3E-18 140.1 25.6 274 103-413 54-364 (429)
223 3bwn_A AT1G70560, L-tryptophan 99.6 8.8E-15 3E-19 146.4 17.4 258 102-398 22-307 (391)
224 3i5t_A Aminotransferase; pyrid 99.6 2.5E-13 8.4E-18 139.6 28.5 274 114-413 71-391 (476)
225 4a6r_A Omega transaminase; tra 99.6 4.2E-14 1.4E-18 144.4 22.1 283 104-412 52-385 (459)
226 2hox_A ALLIIN lyase 1; cystein 99.6 4.4E-15 1.5E-19 150.6 12.4 270 103-413 57-370 (427)
227 3hmu_A Aminotransferase, class 99.6 1.1E-13 3.9E-18 142.0 22.3 276 104-412 57-387 (472)
228 4ffc_A 4-aminobutyrate aminotr 99.6 2.7E-13 9.3E-18 138.3 22.8 282 104-412 66-386 (453)
229 3oks_A 4-aminobutyrate transam 99.6 5.2E-13 1.8E-17 136.1 24.6 273 114-412 78-388 (451)
230 2cjg_A L-lysine-epsilon aminot 99.6 1.6E-13 5.4E-18 139.8 20.6 262 114-413 71-395 (449)
231 2yky_A Beta-transaminase; tran 99.1 3.5E-14 1.2E-18 145.4 0.0 253 102-393 100-375 (465)
232 4ao9_A Beta-phenylalanine amin 99.4 8.2E-11 2.8E-15 119.9 23.0 241 114-392 104-360 (454)
233 1ohv_A 4-aminobutyrate aminotr 99.3 2.5E-11 8.4E-16 124.5 17.8 263 114-412 80-417 (472)
234 4atq_A 4-aminobutyrate transam 99.0 8.3E-08 2.8E-12 97.8 25.7 255 114-392 81-364 (456)
235 4e3q_A Pyruvate transaminase; 98.6 1.9E-06 6.6E-11 88.1 20.4 248 114-393 84-383 (473)
236 4a0g_A Adenosylmethionine-8-am 98.4 4.8E-06 1.6E-10 90.9 17.6 91 241-341 577-687 (831)
237 2yxb_A Coenzyme B12-dependent 53.6 15 0.0005 31.1 4.6 52 223-279 46-97 (161)
238 1y80_A Predicted cobalamin bin 46.0 34 0.0012 29.9 6.0 59 222-285 115-177 (210)
239 3ghf_A Septum site-determining 42.2 38 0.0013 27.1 5.2 46 238-283 25-78 (120)
240 4gqr_A Pancreatic alpha-amylas 38.4 15 0.00051 36.2 2.7 28 260-287 71-98 (496)
241 1ccw_A Protein (glutamate muta 38.0 24 0.00083 28.7 3.5 53 222-279 30-82 (137)
242 1xrs_B D-lysine 5,6-aminomutas 35.3 58 0.002 29.9 5.9 52 223-279 157-211 (262)
243 2ab1_A Hypothetical protein; H 33.2 90 0.0031 24.9 6.1 50 237-287 48-97 (122)
244 1lwj_A 4-alpha-glucanotransfer 32.3 23 0.00078 34.8 2.8 28 260-287 64-91 (441)
245 1g94_A Alpha-amylase; beta-alp 31.8 22 0.00076 35.0 2.6 28 260-287 59-86 (448)
246 1iv0_A Hypothetical protein; r 31.2 99 0.0034 23.6 5.8 52 236-287 36-94 (98)
247 3bh4_A Alpha-amylase; calcium, 30.6 24 0.00082 35.1 2.7 28 260-287 73-100 (483)
248 3v7e_A Ribosome-associated pro 29.9 54 0.0018 24.1 3.9 44 240-285 16-59 (82)
249 4aie_A Glucan 1,6-alpha-glucos 29.8 26 0.00089 35.2 2.8 28 260-287 74-101 (549)
250 1wpc_A Glucan 1,4-alpha-maltoh 29.8 26 0.00088 34.9 2.8 28 260-287 77-104 (485)
251 1ud2_A Amylase, alpha-amylase; 29.4 27 0.00091 34.8 2.8 28 260-287 75-102 (480)
252 1hvx_A Alpha-amylase; hydrolas 28.8 27 0.00094 35.1 2.8 28 260-287 76-103 (515)
253 2guy_A Alpha-amylase A; (beta- 28.7 28 0.00096 34.6 2.8 28 260-287 92-119 (478)
254 1ht6_A AMY1, alpha-amylase iso 28.6 28 0.00095 33.9 2.7 28 260-287 63-90 (405)
255 1gcy_A Glucan 1,4-alpha-maltot 28.5 29 0.00098 35.1 2.8 28 260-287 87-114 (527)
256 3ezx_A MMCP 1, monomethylamine 28.4 58 0.002 28.7 4.6 54 221-279 118-173 (215)
257 1mxg_A Alpha amylase; hyperthe 27.7 30 0.001 34.0 2.8 28 260-287 81-108 (435)
258 1wza_A Alpha-amylase A; hydrol 26.3 27 0.00093 34.8 2.2 28 260-287 76-103 (488)
259 2z1k_A (NEO)pullulanase; hydro 25.8 28 0.00096 34.5 2.1 28 260-287 91-118 (475)
260 2lbw_A H/ACA ribonucleoprotein 25.6 1.4E+02 0.0048 23.6 6.0 42 240-283 25-67 (121)
261 2aaa_A Alpha-amylase; glycosid 25.3 30 0.001 34.4 2.3 28 260-287 92-119 (484)
262 2dh2_A 4F2 cell-surface antige 25.2 30 0.001 34.0 2.2 27 261-287 77-103 (424)
263 3igs_A N-acetylmannosamine-6-p 25.1 1.6E+02 0.0054 26.2 6.9 48 239-287 90-137 (232)
264 2i2x_B MTAC, methyltransferase 25.0 88 0.003 28.3 5.3 53 222-279 150-202 (258)
265 3q58_A N-acetylmannosamine-6-p 25.0 1.6E+02 0.0055 26.1 6.9 48 239-287 90-137 (229)
266 3bzy_B ESCU; auto cleavage pro 25.0 39 0.0013 25.3 2.3 20 268-287 29-48 (83)
267 3edf_A FSPCMD, cyclomaltodextr 24.6 36 0.0012 35.0 2.8 28 260-287 193-220 (601)
268 1zja_A Trehalulose synthase; s 24.4 37 0.0013 34.5 2.8 28 260-287 74-101 (557)
269 1cyg_A Cyclodextrin glucanotra 24.0 38 0.0013 35.5 2.8 28 260-287 106-133 (680)
270 1vr6_A Phospho-2-dehydro-3-deo 23.9 81 0.0028 30.2 4.9 57 235-291 220-287 (350)
271 2wqp_A Polysialic acid capsule 23.9 91 0.0031 29.8 5.2 90 235-328 155-255 (349)
272 1jae_A Alpha-amylase; glycosid 23.9 26 0.00091 34.8 1.5 28 260-287 69-96 (471)
273 1qho_A Alpha-amylase; glycosid 23.9 38 0.0013 35.5 2.8 28 260-287 102-129 (686)
274 1zco_A 2-dehydro-3-deoxyphosph 23.6 1E+02 0.0036 28.0 5.4 58 235-292 137-205 (262)
275 1d3c_A Cyclodextrin glycosyltr 23.6 39 0.0013 35.4 2.8 28 260-287 110-137 (686)
276 3dhu_A Alpha-amylase; structur 23.1 34 0.0012 33.6 2.1 27 261-287 79-105 (449)
277 2wc7_A Alpha amylase, catalyti 22.8 29 0.00098 34.6 1.6 28 260-287 97-124 (488)
278 3bmv_A Cyclomaltodextrin gluca 22.7 41 0.0014 35.2 2.8 28 260-287 111-138 (683)
279 3nvt_A 3-deoxy-D-arabino-heptu 22.7 83 0.0029 30.5 4.8 57 235-291 256-323 (385)
280 1m53_A Isomaltulose synthase; 22.0 36 0.0012 34.7 2.1 28 260-287 87-114 (570)
281 1vhx_A Putative holliday junct 21.9 1.1E+02 0.0038 25.2 4.9 53 236-288 40-100 (150)
282 3aj7_A Oligo-1,6-glucosidase; 21.9 45 0.0015 34.3 2.8 28 260-287 82-109 (589)
283 1uok_A Oligo-1,6-glucosidase; 21.6 37 0.0013 34.5 2.1 28 260-287 73-100 (558)
284 1vs1_A 3-deoxy-7-phosphoheptul 21.6 1.2E+02 0.004 27.9 5.4 57 235-291 152-219 (276)
285 1j0h_A Neopullulanase; beta-al 21.6 46 0.0016 34.1 2.8 28 260-287 217-244 (588)
286 3bc9_A AMYB, alpha amylase, ca 21.3 44 0.0015 34.5 2.6 28 260-287 203-230 (599)
287 2ze0_A Alpha-glucosidase; TIM 20.6 40 0.0014 34.3 2.1 28 260-287 73-100 (555)
288 1nu0_A Hypothetical protein YQ 20.4 1.5E+02 0.005 24.2 5.2 53 235-287 37-97 (138)
289 3t7y_A YOP proteins translocat 20.2 53 0.0018 25.3 2.2 20 268-287 44-63 (97)
No 1
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=100.00 E-value=4.8e-80 Score=616.32 Aligned_cols=339 Identities=63% Similarity=1.042 Sum_probs=289.2
Q ss_pred chhhccccccChhHHHHHHHHHHHhhhcccccccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q 014724 77 SFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKR 156 (419)
Q Consensus 77 ~~~~~~l~~~~~~~~~~~~~e~~r~~~~i~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~ 156 (419)
|+.++.|.+.||+++++|++|..||+.+|+||+|||++|++|++|+++.++|+|+|||||.|||+|++++|++|.+|+++
T Consensus 29 ~~~~~~l~~~Dpei~~~i~~E~~RQ~~~ieLIASEN~~S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la~~r 108 (490)
T 3ou5_A 29 WTGQESLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRR 108 (490)
T ss_dssp CSSCCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGTCCCCC----------CHHHHHHHHHHHH
T ss_pred cccccchhhhCHHHHHHHHHHHHHHHcCceEecCCCcCCHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHHHHHH
Confidence 55688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCC
Q 014724 157 ALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG 236 (419)
Q Consensus 157 la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~ 236 (419)
++++||+++++|+|||++.||+.||++++.+|++|||+||.+++.||||++||+++...++..+|..|+.++|++|++++
T Consensus 109 ak~lF~a~~A~w~VNVQP~SGs~AN~avy~All~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd~~t~ 188 (490)
T 3ou5_A 109 ALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTG 188 (490)
T ss_dssp HHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHCC-CCCEECBC----------------------------CBCEETTTT
T ss_pred HHHHhCCCccccCCCCCcCCHHHHHHHHHHHHcCCCCEEEecccCCCCcccccccCCCcccccccccccccccccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999876555678899999999999999899
Q ss_pred CCCHHHHHHHhhhcCCeEEEEcCCCCCCcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCCCCcEEEeCCCCcC
Q 014724 237 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSL 316 (419)
Q Consensus 237 ~iD~d~Le~~l~~~~pklIi~~~s~~p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~~~Div~~S~hK~l 316 (419)
.||+|++++++++++||+||++.|.||+.+|++++++||++.|++|++|+||++||++.|.+++|++++|||++||||||
T Consensus 189 ~IDyd~~~~~A~~~kPklIi~G~SaY~r~id~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~~~ADvVTtTTHKTL 268 (490)
T 3ou5_A 189 LIDYNQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTL 268 (490)
T ss_dssp EECHHHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSSTT
T ss_pred cccHHHHHHHHhhcCCCeEEECCccCccccCHHHHHHHHhhcccEEEechhhhhhhhcccccCCccccceEEeccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCeeEEEEeCCCc---------chhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHH
Q 014724 317 RGPRGGMIFFKKDPV---------LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALA 387 (419)
Q Consensus 317 ~GprgG~i~~~~~~~---------~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~ 387 (419)
+|||||+|+++++.. ..+++.++|++++||++||+|++|.+||+++|+++++.++|+.|.+++.+|++.|+
T Consensus 269 rGPrGG~Il~~~~~~~~~~k~~~~~~~~~~kkin~aVFPg~qggp~~h~IAAkAVaf~Ea~~p~fk~Ya~qVv~NAkaLA 348 (490)
T 3ou5_A 269 RGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMA 348 (490)
T ss_dssp CSCSCEEEEEECSEEEECC--CCEEECCCHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHH
T ss_pred cCCCceEEEeccccccccccccchhHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHH
Confidence 999999999998411 12368899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCcEEecCCCcceeEEEEeCCcc
Q 014724 388 SRLVELGYKLVSGGSDNHLVLVDLRPMV 415 (419)
Q Consensus 388 ~~L~~~G~~v~~~~t~~hlv~vd~~~~~ 415 (419)
+.|.++||++++++||+|+++||+++++
T Consensus 349 ~~L~~~G~~vvsGgTdnHlvLvDl~~~g 376 (490)
T 3ou5_A 349 DALLERGYSLVSGGTDNHLVLVDLRPKG 376 (490)
T ss_dssp HHHHHTTCEEGGGSCSSSEEEEECGGGT
T ss_pred HHHHhCCCeeecCCCCceEEEEeccccC
Confidence 9999999999999999999999999886
No 2
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=100.00 E-value=1.8e-57 Score=469.51 Aligned_cols=339 Identities=63% Similarity=1.042 Sum_probs=270.9
Q ss_pred chhhccccccChhHHHHHHHHHHHhhhcccccccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q 014724 77 SFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKR 156 (419)
Q Consensus 77 ~~~~~~l~~~~~~~~~~~~~e~~r~~~~i~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~ 156 (419)
|..+++|.++||+++++|++|+.||.+.|+|++|||++|++|++|+.+.+.++|++|||++|||+|+++++++|++++++
T Consensus 29 ~~~~~~l~~~d~~~~~~~~~e~~rq~~~i~lias~n~~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~~ 108 (490)
T 2a7v_A 29 WTGQESLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRR 108 (490)
T ss_dssp CSSCCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHH
T ss_pred ccccchhhhcCHHHHHHHHHHHHHHHcCceEECCCCCCCHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHHH
Confidence 44467899999999999999999999999999999999999999999999999999999999999999889999999999
Q ss_pred HHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCC
Q 014724 157 ALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG 236 (419)
Q Consensus 157 la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~ 236 (419)
++++||++.++|+++|+++||+.||++++.++++|||+|++++++|++|++|+++...+.+...|..++.++++++++++
T Consensus 109 ~a~l~g~~~~~~~~~v~~~sGt~An~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~~~~ 188 (490)
T 2a7v_A 109 ALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTG 188 (490)
T ss_dssp HHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHCCSCEECCC-------------------------------CCBCTTTC
T ss_pred HHHHcCCCcccCceEEeCCchHHHHHHHHHHHcCCCCEecccCccccccccchhhhcchhHHHcCCeEEEEecccccccC
Confidence 99999999877877888899999999999999999999999999999999887643322345667777778888876789
Q ss_pred CCCHHHHHHHhhhcCCeEEEEcCCCCCCcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCCCCcEEEeCCCCcC
Q 014724 237 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSL 316 (419)
Q Consensus 237 ~iD~d~Le~~l~~~~pklIi~~~s~~p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~~~Div~~S~hK~l 316 (419)
.+|+|+|++++.+++||+|+++.++||+.+|+++|++||++||++|++|++|++|+++.+..+++++++|++++|+||+|
T Consensus 189 ~iD~d~le~~l~~~~~klIi~~~s~~~~~~dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~~~aDiv~~S~hK~l 268 (490)
T 2a7v_A 189 LIDYNQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTL 268 (490)
T ss_dssp SBCHHHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSGGG
T ss_pred CcCHHHHHHHHhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEccccccccccCCcCCCCCCCCCEEEECCcccC
Confidence 99999999999777899999999999999999999999999999999999999999887777777778999999999999
Q ss_pred CCCCeeEEEEeCCCc---------chhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHH
Q 014724 317 RGPRGGMIFFKKDPV---------LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALA 387 (419)
Q Consensus 317 ~GprgG~i~~~~~~~---------~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~ 387 (419)
+||+||+|+++++.+ ..+++.+++++..+++.||+|+++.++|+++|++++..+++++|.+++.+|+++|+
T Consensus 269 ~Gp~GG~i~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaAla~Al~~~~~~~~~~~~~~~~~na~~L~ 348 (490)
T 2a7v_A 269 RGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMA 348 (490)
T ss_dssp CSCSCEEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHH
T ss_pred ccccchheeeccchhcccccccchhhHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Confidence 999999999988411 01246778888899999999999999999999998877788999999999999999
Q ss_pred HHHHhCCcEEecCCCcceeEEEEeCCcc
Q 014724 388 SRLVELGYKLVSGGSDNHLVLVDLRPMV 415 (419)
Q Consensus 388 ~~L~~~G~~v~~~~t~~hlv~vd~~~~~ 415 (419)
+.|.+.|++++.+++++|++|||+++.+
T Consensus 349 ~~L~~~G~~v~~~~t~t~lv~vdl~~~g 376 (490)
T 2a7v_A 349 DALLERGYSLVSGGTDNHLVLVDLRPKG 376 (490)
T ss_dssp HHHHHTTCEEGGGSCSSSEEEEECTTTT
T ss_pred HHHHHcCcEEecCCCCCeEEEEEeCCCC
Confidence 9999999999877789999999998765
No 3
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=100.00 E-value=6.3e-51 Score=421.39 Aligned_cols=341 Identities=66% Similarity=1.070 Sum_probs=298.7
Q ss_pred CcchhhccccccChhHHHHHHHHHHHhhhcccccccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHH
Q 014724 75 GSSFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQ 154 (419)
Q Consensus 75 ~~~~~~~~l~~~~~~~~~~~~~e~~r~~~~i~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~ 154 (419)
.+.+++++|.++||+++.++.+|..||.+.|+|++++|++|+.|++|+.+.+.++|.+|||++++|+|++.++++|++++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~a~e~~~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~ 96 (483)
T 1rv3_A 17 HEQMLAQPLKDSDAEVYDIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQ 96 (483)
T ss_dssp HHHHTTSCHHHHCHHHHHHHHHHHHHHHSSEECCTTCCCCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHH
T ss_pred HHHHHhhhhhhcCHHHHHHHHHHHHHhhcCeEEEcCCCCCCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHH
Confidence 34556778999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCC
Q 014724 155 KRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES 234 (419)
Q Consensus 155 ~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~ 234 (419)
++++++||+++++|+++|+++||+.||.+++.++++|||+|++++++|++|++++++.....+...|..++.++++++++
T Consensus 97 ~~~a~~~g~~~~~~~~~V~~~sGs~an~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~~~ 176 (483)
T 1rv3_A 97 KRALQAYGLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPD 176 (483)
T ss_dssp HHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCTT
T ss_pred HHHHHHhCCCcccCceEEEECCcHHHHHHHHHHhcCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEECccccC
Confidence 99999999998777678999999999999999999999999999999999998886543334556676678888877766
Q ss_pred CCCCCHHHHHHHhhhcCCeEEEEcCCCCCCcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCCCCcEEEeCCCC
Q 014724 235 TGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHK 314 (419)
Q Consensus 235 ~~~iD~d~Le~~l~~~~pklIi~~~s~~p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~~~Div~~S~hK 314 (419)
++.+|+|+|++++++.+||+|+++.+++++..|+++|++||+++|++|++|++|+.|++..+..++|++++|++++|+||
T Consensus 177 ~~~iD~d~le~~i~~~~tklIi~~~sn~~~~~dl~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~~~div~~s~~K 256 (483)
T 1rv3_A 177 TGYIDYDRLEENARLFHPKLIIAGTSCYSRNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFEHCHVVTTTTHK 256 (483)
T ss_dssp TCSBCHHHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGGTCSEEEEESSG
T ss_pred CCcCCHHHHHHHHhhcCCcEEEEeCCcCCCcCCHHHHHHHHHHcCCEEEEEccchhcccccCCCCCCCCCCcEEEecCcc
Confidence 78999999999998568999998666677788999999999999999999999999988777666667789999999999
Q ss_pred cCCCCCeeEEEEeCCCcc---------hhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHH
Q 014724 315 SLRGPRGGMIFFKKDPVL---------GVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRA 385 (419)
Q Consensus 315 ~l~GprgG~i~~~~~~~~---------~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~ 385 (419)
+|+|||||+++++++... .|++.++++...+++.+|+|+++.++++++|++++..++++++.+++.+|+++
T Consensus 257 ~l~GprgG~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~~~~~~~~~~~~~~~~~~ 336 (483)
T 1rv3_A 257 TLRGCRAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVANCRA 336 (483)
T ss_dssp GGCCCSCEEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHH
T ss_pred cCCCCCceEEEEcchhhhhccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHH
Confidence 999999999999985210 01355667777788889999999999999999988777889999999999999
Q ss_pred HHHHHHhCCcEEecCCCcceeEEEEeCCcc
Q 014724 386 LASRLVELGYKLVSGGSDNHLVLVDLRPMV 415 (419)
Q Consensus 386 l~~~L~~~G~~v~~~~t~~hlv~vd~~~~~ 415 (419)
|.+.|.+.|++++.+++++|++|+|+++.+
T Consensus 337 l~~~L~~~g~~~~~~~~~~~~~~v~~~~~g 366 (483)
T 1rv3_A 337 LSAALVELGYKIVTGGSDNHLILVDLRSKG 366 (483)
T ss_dssp HHHHHHHTTCEEGGGSCSSSEEEEEGGGGT
T ss_pred HHHHHHhcCCEeccCCCCCceEEEeccCCC
Confidence 999999999999876678899999998654
No 4
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.3e-42 Score=355.35 Aligned_cols=322 Identities=52% Similarity=0.806 Sum_probs=280.3
Q ss_pred hhccccccChhHHHHHHHHHHHhhhcccccccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 014724 79 VDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRAL 158 (419)
Q Consensus 79 ~~~~l~~~~~~~~~~~~~e~~r~~~~i~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la 158 (419)
+.+++..++|+++..+.+|..|+.+.|+|++++|+++|.|++++.+.+.++|.+||++.+|+.|+...+.+|++++++++
T Consensus 22 ~~~~l~~~~~~i~~~~~~~~~~~~~~i~l~~~~~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~a~~~la 101 (447)
T 3h7f_A 22 MSAPLAEVDPDIAELLAKELGRQRDTLEMIASENFVPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAK 101 (447)
T ss_dssp GGCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHH
T ss_pred hHHHHHhCCHHHHHHHHHHHHHHhCceeEecCCCCCCHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHHHHHHHHH
Confidence 45778899999999999999999999999999999999999999999988898899999999999988888888779999
Q ss_pred HHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCC
Q 014724 159 AAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLV 238 (419)
Q Consensus 159 ~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~i 238 (419)
+++|++. ++++++||++|+..++.++++|||+|++++++|++|+.++. .+...|..+..++++++++++.+
T Consensus 102 ~~~g~~~----~~v~~~sGs~a~~~a~~~~~~~Gd~Vl~~~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~ 172 (447)
T 3h7f_A 102 ALFGAEF----ANVQPHSGAQANAAVLHALMSPGERLLGLDLANGGHLTHGM-----RLNFSGKLYENGFYGVDPATHLI 172 (447)
T ss_dssp HHHTCSE----EECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTC-----TTSHHHHSSEEEEECCCTTTCSC
T ss_pred HHcCCCc----eEEEeCCHHHHHHHHHHHhcCCCCEEEecCcccccccchhh-----hhhhcCCeeEEEEcCcCcccCCc
Confidence 9999986 45668999999999999999999999999999988766553 22344555677777777667889
Q ss_pred CHHHHHHHhhhcCCeEEEEcCCCCCCcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCCCCcEEEeCCCCcCCC
Q 014724 239 DYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRG 318 (419)
Q Consensus 239 D~d~Le~~l~~~~pklIi~~~s~~p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~~~Div~~S~hK~l~G 318 (419)
|+++|++.+++.++|+|+++.++||+..++++|+++|++||++||+|++|+.|+++.+..+++++++|++++|+||+|+|
T Consensus 173 d~~~l~~~i~~~~~~~i~~~~~~~~~~~~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~~~~di~~~s~sK~l~G 252 (447)
T 3h7f_A 173 DMDAVRATALEFRPKVIIAGWSAYPRVLDFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPVPHADVVSTTVHKTLGG 252 (447)
T ss_dssp CHHHHHHHHHHHCCSEEEEECSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTCSEEEEESSGGGCC
T ss_pred CHHHHHHHHHhcCCeEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCCCCCcEEEecCCcCCCC
Confidence 99999999976789999998899998889999999999999999999999998877666566667889999999999999
Q ss_pred CCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-----
Q 014724 319 PRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL----- 393 (419)
Q Consensus 319 prgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~----- 393 (419)
|+||++++++ ++.+.+....+++.++++....+++++.++.....++++++.+++.++++++.+.|++.
T Consensus 253 ~~gG~i~~~~------~~~~~l~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 326 (447)
T 3h7f_A 253 GRSGLIVGKQ------QYAKAINSAVFPGQQGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAPDVAKA 326 (447)
T ss_dssp CSCEEEEECG------GGHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSHHHHHT
T ss_pred CCeEEEEECH------HHHHHHhhhcCCcccCCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhccccCC
Confidence 9999999987 57777777777788888888878888888888766678899999999999999999988
Q ss_pred CcEEecCCCcceeEEEEeCCcc
Q 014724 394 GYKLVSGGSDNHLVLVDLRPMV 415 (419)
Q Consensus 394 G~~v~~~~t~~hlv~vd~~~~~ 415 (419)
|++++.+++++|++|+++++.+
T Consensus 327 g~~~~~~~~~~~~~~~~~~~~~ 348 (447)
T 3h7f_A 327 GVSVVSGGTDVHLVLVDLRDSP 348 (447)
T ss_dssp TCEEGGGSCSSSEEEEECTTSS
T ss_pred CeEEecCCCCCCEEEEEcCCCC
Confidence 9998876678999999998654
No 5
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=100.00 E-value=3.9e-40 Score=331.58 Aligned_cols=320 Identities=51% Similarity=0.818 Sum_probs=266.3
Q ss_pred ccccccChhHHHHHHHHHHHhhhcccccccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 014724 81 YSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAA 160 (419)
Q Consensus 81 ~~l~~~~~~~~~~~~~e~~r~~~~i~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~ 160 (419)
.++..+||++++.+.+|..++.+.|+|++++|++++.|++++.+.+.+.|.++|++.+++.+....+++|+.++++++++
T Consensus 4 ~~~~~~~~~i~~~~~~e~~~~~~~i~l~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~ 83 (417)
T 3n0l_A 4 MSLEMFDKEIFDLTNKELERQCEGLEMIASENFTLPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKL 83 (417)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHH
T ss_pred cchhhcCHHHHHHHHHHHHHHhcCeeeecccCCCCHHHHHHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHHH
Confidence 45788999999999988888889999999999999999999999987888888999889999988899998899999999
Q ss_pred cCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCH
Q 014724 161 FNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDY 240 (419)
Q Consensus 161 ~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~ 240 (419)
+|+++ .+|++++|++|+..++.++++|||+|++.+++|.++..++. .+...|..+..++++++ +++.+|+
T Consensus 84 ~g~~~----~~i~~~sGt~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~-~~~~~d~ 153 (417)
T 3n0l_A 84 FNCKF----ANVQPNSGSQANQGVYAALINPGDKILGMDLSHGGHLTHGA-----KVSSSGKMYESCFYGVE-LDGRIDY 153 (417)
T ss_dssp HTCSE----EECCCSSHHHHHHHHHHHHSCTTCEEEEECC---------------------CCSEEEEECCC-TTSSCCH
T ss_pred hCCCC----cceEeccHHHHHHHHHHHhcCCCCEEEecccccccccchhh-----hhhhhcceeeeEeccCC-CCCCcCH
Confidence 99976 35788999999999999999999999999999988765442 23345566677777776 5788999
Q ss_pred HHHHHHhhhcCCeEEEEcCCCCCCcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCCCCcEEEeCCCCcCCCCC
Q 014724 241 DMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPR 320 (419)
Q Consensus 241 d~Le~~l~~~~pklIi~~~s~~p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~~~Div~~S~hK~l~Gpr 320 (419)
++|++.+++.++++|++++++||+..|+++|.++|++||++||+|++|+.|..+.+..+.+++++|++++|+||+|+||+
T Consensus 154 ~~l~~~i~~~~~~~v~~~~~~~G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~l~g~~ 233 (417)
T 3n0l_A 154 EKVREIAKKEKPKLIVCGASAYARVIDFAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPFPYAHVVSSTTHKTLRGPR 233 (417)
T ss_dssp HHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCTTTCSEEEEESSTTTCSCS
T ss_pred HHHHHHHHhcCCeEEEECCcccCccCCHHHHHHHHHHcCCEEEEECccchhhhhcccCCCccccceEEEeeCccccCCCC
Confidence 99999998568999999988899989999999999999999999999998888766655555678999999999999999
Q ss_pred eeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecC
Q 014724 321 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSG 400 (419)
Q Consensus 321 gG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~ 400 (419)
||+++++++ ++.+.+....+++..++++...+++++.++......+++++.+++.++++++.+.|.+.|+++..+
T Consensus 234 ~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 308 (417)
T 3n0l_A 234 GGIIMTNDE-----ELAKKINSAIFPGIQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMDRKFKLVSD 308 (417)
T ss_dssp CEEEEESCH-----HHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGG
T ss_pred eeEEEECCH-----HHHHHHhhhhCCcccCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCCceeccC
Confidence 999999853 677777776667777788888888888788776656778999999999999999999999998875
Q ss_pred CCcceeEEEEeCCcc
Q 014724 401 GSDNHLVLVDLRPMV 415 (419)
Q Consensus 401 ~t~~hlv~vd~~~~~ 415 (419)
++.+|++|+++++.+
T Consensus 309 ~~~~~~~~~~~~~~~ 323 (417)
T 3n0l_A 309 GTDNHLVLMSFLDRE 323 (417)
T ss_dssp SCSSSEEEEECTTSS
T ss_pred CCCceEEEEEcccCC
Confidence 678899999997654
No 6
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=100.00 E-value=3.7e-38 Score=317.09 Aligned_cols=319 Identities=51% Similarity=0.833 Sum_probs=247.0
Q ss_pred ccccChhHHHHHHHHHHHhhhcccccccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcC
Q 014724 83 LGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN 162 (419)
Q Consensus 83 l~~~~~~~~~~~~~e~~r~~~~i~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g 162 (419)
+..++|++++++.++..++.+.+.+++++|+++|.|++++.+.+.+.+..||++.+++.+....+.+++.+++++++++|
T Consensus 11 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~n~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~ 90 (420)
T 3gbx_A 11 IADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFG 90 (420)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGGCCC--------------CHHHHHHHHHHHHHHHT
T ss_pred hhhcCHHHHHHHHHHHHhhhcceeeeccCCCCCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHhC
Confidence 78899999999999888888999999999999999999999998777877899888888877667888888899999999
Q ss_pred CCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHH
Q 014724 163 LDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDM 242 (419)
Q Consensus 163 ~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~ 242 (419)
++. ..|++++|++|+..++.++++|||+|++.++.|++++.++. .+...|..+..++++.+ +++.+|+++
T Consensus 91 ~~~----~~v~~~sGs~a~~~a~~~~~~~gd~v~~~~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~-~~~~~d~~~ 160 (420)
T 3gbx_A 91 ADY----ANVQPHSGSQANFAVYTALLQPGDTVLGMNLAQGGHLTHGS-----PVNFSGKLYNIVPYGID-ESGKIDYDE 160 (420)
T ss_dssp CSE----EECCCSSHHHHHHHHHHHHCCTTCEEEEEEEC-----------------CHHHHSEEEEEEEC-TTCSCCHHH
T ss_pred CCC----ceeEecCcHHHHHHHHHHhcCCCCEEEecchhhcceeccch-----hhhhcccceeEEeccCC-ccCCcCHHH
Confidence 976 35778999999999999999999999999999988654442 22345555677777666 568899999
Q ss_pred HHHHhhhcCCeEEEEcCCCCCCcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCCCCcEEEeCCCCcCCCCCee
Q 014724 243 LEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGG 322 (419)
Q Consensus 243 Le~~l~~~~pklIi~~~s~~p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~~~Div~~S~hK~l~GprgG 322 (419)
|++++++.++++|+++.|++|+..|+++|+++|++||++||+|++|+.|....+..+.+++..|++++|+||+|.||+||
T Consensus 161 l~~~i~~~~~~~v~~~~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~gg 240 (420)
T 3gbx_A 161 MAKLAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPVPHAHVVTTTTHKTLAGPRGG 240 (420)
T ss_dssp HHHHHHHHCCSEEEECCTTCCSCCCHHHHHHHHHHTTCEEEEECTTTHHHHHTTSSCCSTTTSSEEEEESSGGGCSCSCE
T ss_pred HHHHHHhcCCeEEEEecCccCCccCHHHHHHHHHHcCCEEEEECCcchhceecccCCcccccCCEEEeecccCCCCCCce
Confidence 99999876799999988999988999999999999999999999998887765554555557899999999999999999
Q ss_pred EEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCC
Q 014724 323 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGS 402 (419)
Q Consensus 323 ~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t 402 (419)
++++++.. .++.+.+....+++.++++.+..+++++.++.....++++++.+++.++++++.+.|.+.|+++..+++
T Consensus 241 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 317 (420)
T 3gbx_A 241 LILAKGGD---EELYKKLNSAVFPSAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLNRGYKVVSGGT 317 (420)
T ss_dssp EEEESSCC---HHHHHHHHHHHC----CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSC
T ss_pred EEEEcCCc---HHHHHHhhhhcCCCCCCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhcCCeeccCCC
Confidence 99998721 046666776677777778888877777777777665677889999999999999999999999886556
Q ss_pred cceeEEEEeCCc
Q 014724 403 DNHLVLVDLRPM 414 (419)
Q Consensus 403 ~~hlv~vd~~~~ 414 (419)
.++++|+++.+.
T Consensus 318 ~~~~~~~~~~~~ 329 (420)
T 3gbx_A 318 ENHLFLLDLVDK 329 (420)
T ss_dssp SSSEEEEECGGG
T ss_pred CCeEEEEEcCCC
Confidence 789999998653
No 7
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=100.00 E-value=4.4e-38 Score=317.04 Aligned_cols=324 Identities=52% Similarity=0.818 Sum_probs=246.9
Q ss_pred chhhccccccChhHHHHHHHHHHHhhhcccccccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHH
Q 014724 77 SFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKR 156 (419)
Q Consensus 77 ~~~~~~l~~~~~~~~~~~~~e~~r~~~~i~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~ 156 (419)
.++.+++..++|+++..+.++..++.+.++|.+++|+++|.|++++.+.+.+.|..++++.+++.+....+.+++.++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 86 (425)
T 3ecd_A 7 PFFSQSLAERDASVRGAILKELERQQSQVELIASENIVSRAVLDAQGSVLTNKYAEGYPGKRYYGGCEFADEVEALAIER 86 (425)
T ss_dssp HHHHCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGSSCTTC------------CCHHHHHHHHH
T ss_pred hHHHHHHHhhCHHHHHHHHHHHHHHhcceeeecccCCCCHHHHHHHhhhhhcccccCCCcchhcCCChHHHHHHHHHHHH
Confidence 35678899999999999998888888899999999999999999999998778878888888888876656677777788
Q ss_pred HHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCC
Q 014724 157 ALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG 236 (419)
Q Consensus 157 la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~ 236 (419)
+++++|.+. +.+++++|++|+..++.++++|||+|++.++.|++++.++. .....|..++.++++++++++
T Consensus 87 ~~~~~~~~~----~~v~~~~Gs~a~~~al~~~~~~gd~Vi~~~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~ 157 (425)
T 3ecd_A 87 VKRLFNAGH----ANVQPHSGAQANGAVMLALAKPGDTVLGMSLDAGGHLTHGA-----KPALSGKWFNALQYGVSRDTM 157 (425)
T ss_dssp HHHHHTCSE----EECCCSSHHHHHHHHHHHHCCTTCEEEEECC-----------------------CEEEEECCCTTTS
T ss_pred HHHHhCCCC----ceeecCchHHHHHHHHHHccCCCCEEEEcccccccceecch-----hhhhcccceeeeecCCCcccC
Confidence 999999876 34668899999999999999999999999999887543332 122456556777777765668
Q ss_pred CCCHHHHHHHhhhcCCeEEEEcCCCCCCcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCCCCcEEEeCCCCcC
Q 014724 237 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSL 316 (419)
Q Consensus 237 ~iD~d~Le~~l~~~~pklIi~~~s~~p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~~~Div~~S~hK~l 316 (419)
.+|+++|++.+.+.++++|++++|+||+..++++|+++|++||++||+|++|+.|..+.+....+++.+|++++|+||+|
T Consensus 158 ~~d~~~l~~~i~~~~~~~v~~~~~~~~~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~~~di~~~s~sK~l 237 (425)
T 3ecd_A 158 LIDYDQVEALAQQHKPSLIIAGFSAYPRKLDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEHAHVVTSTTHKTL 237 (425)
T ss_dssp SCCHHHHHHHHHHHCCSEEEEECSCCCSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSGGG
T ss_pred ccCHHHHHHHHhhcCCcEEEEccccCCCcCCHHHHHHHHHHcCCEEEEECcChHhhhhcccccCchhcCcEEEecCCccc
Confidence 99999999999766899999998899999999999999999999999999999888766544444446899999999999
Q ss_pred CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcE
Q 014724 317 RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYK 396 (419)
Q Consensus 317 ~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~ 396 (419)
+||+||+++++++ ++.+.+....+++.++++.+..+++++.++.....++++.+.+++.++++++.+.|.+.|++
T Consensus 238 ~g~~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 312 (425)
T 3ecd_A 238 RGPRGGFVLTNDE-----EIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAGGVD 312 (425)
T ss_dssp CCCSCEEEEESCH-----HHHHHHHHHHC-----CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTTCE
T ss_pred CCCCcEEEEeCCH-----HHHHHHHhhhCccccCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 9999999999864 57777776667776777777777777777776665677889999999999999999999999
Q ss_pred EecCCCcceeEEEEeCCc
Q 014724 397 LVSGGSDNHLVLVDLRPM 414 (419)
Q Consensus 397 v~~~~t~~hlv~vd~~~~ 414 (419)
+..+++.++++|+++.+.
T Consensus 313 ~~~~~~~~~~~~~~~~~~ 330 (425)
T 3ecd_A 313 LVTGGTDNHLLLVDLRPK 330 (425)
T ss_dssp EGGGSCSSSEEEEECGGG
T ss_pred eccCCCCceEEEEEeCCC
Confidence 886556789999998653
No 8
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=100.00 E-value=1.3e-34 Score=290.17 Aligned_cols=318 Identities=52% Similarity=0.876 Sum_probs=251.6
Q ss_pred ccccccChhHHHHHHHHHHHhhhcccccccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 014724 81 YSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAA 160 (419)
Q Consensus 81 ~~l~~~~~~~~~~~~~e~~r~~~~i~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~ 160 (419)
+.+.++||+++..+.++..++.+.+.+.+++++.++.|++++.+.+.+++..||++++++.|.....++|+.++++++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~ 81 (405)
T 2vi8_A 2 KYLPQQDPQVFAAIEQERKRQHAKIELIASENFVSRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQL 81 (405)
T ss_dssp CSHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHH
T ss_pred cchhhhCHHHHHHHHHHHHHhhcceeeccCcccCCHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHH
Confidence 35677899999999988887777788888999999999999999886566667887777777666788888888999999
Q ss_pred cCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCH
Q 014724 161 FNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDY 240 (419)
Q Consensus 161 ~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~ 240 (419)
+|.+. ..+++++|++|+..++.++++|||+|+++++.|+++...+. .+...|..++.++++++++++.+|+
T Consensus 82 ~g~~~----~~i~~~sGt~a~~~a~~~~~~~gd~Vl~~~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~d~ 152 (405)
T 2vi8_A 82 FGAEH----ANVQPHSGAQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGS-----PVNFSGVQYNFVAYGVDPETHVIDY 152 (405)
T ss_dssp HTCSE----EECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCTTTTC-----TTSHHHHHSEEEEECBCTTTCSBCH
T ss_pred hCCCc----eEEEecCcHHHHHHHHHHhcCCCCEEEEecccccchhcccc-----hhhhccceeEEEecccccccCCcCH
Confidence 99885 34667899999999999999999999999988877643211 1123444446677766545678999
Q ss_pred HHHHHHhhhcCCeEEEEcCCCCCCcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCCCCcEEEeCCCCcCCCCC
Q 014724 241 DMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPR 320 (419)
Q Consensus 241 d~Le~~l~~~~pklIi~~~s~~p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~~~Div~~S~hK~l~Gpr 320 (419)
++|++.+++.++++|+++.++++...|+++|.++|++||++||+|++|..|....+.....+++.|++++|+||+|.||.
T Consensus 153 ~~l~~~i~~~~~~~v~~~~~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~~~g~~ 232 (405)
T 2vi8_A 153 DDVREKARLHRPKLIVAAAAAYPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRGPR 232 (405)
T ss_dssp HHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTCSEEEEESSSTTCCCS
T ss_pred HHHHHHHHhcCCeEEEEeCCCCCccCCHHHHHHHHHHcCCEEEEEccccccccccCcCCCccccCCEEEEeccccCCCCC
Confidence 99999997657899988767778777999999999999999999999987655443333333468999999999998888
Q ss_pred eeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecC
Q 014724 321 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSG 400 (419)
Q Consensus 321 gG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~ 400 (419)
||++++++ ++.+.+.....++..++++...++++..++......++++..+++.++++++.+.|++.|+++...
T Consensus 233 gG~~~~~~------~~~~~l~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 306 (405)
T 2vi8_A 233 GGMILCQE------QFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNEGFTLVSG 306 (405)
T ss_dssp CEEEEECH------HHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGG
T ss_pred CeEEEEcH------HHHHHHHhhhcccccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCCCeEecC
Confidence 99999986 677776655445555666777777766677766555668889999999999999999999988753
Q ss_pred CCcceeEEEEeCC
Q 014724 401 GSDNHLVLVDLRP 413 (419)
Q Consensus 401 ~t~~hlv~vd~~~ 413 (419)
....+++|+++..
T Consensus 307 ~~~~~~~~~~~~~ 319 (405)
T 2vi8_A 307 GTDNHLLLVDLRP 319 (405)
T ss_dssp SCSSSEEEEECGG
T ss_pred CCCceEEEEEccC
Confidence 3457889999864
No 9
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=100.00 E-value=1.8e-34 Score=289.26 Aligned_cols=316 Identities=52% Similarity=0.857 Sum_probs=251.2
Q ss_pred cccChhHHHHHHHHHHHhhhcccccccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCC
Q 014724 84 GEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL 163 (419)
Q Consensus 84 ~~~~~~~~~~~~~e~~r~~~~i~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~ 163 (419)
.+.||+++..+.++..++.+.|++..+++++++.|++++.+.+.+.+..+|++.++..|......+|+.+++++++++|.
T Consensus 5 ~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g~ 84 (407)
T 2dkj_A 5 LKRDEALFELIALEEKRQREGLELIASENFVSKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFGA 84 (407)
T ss_dssp -CCCHHHHHHHHHHHHHHHTSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTC
T ss_pred cccCHHHHHHHHHHHHHhhcceeeccCCCCCCHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHhCC
Confidence 35789999999998888888999999999999999999999886555557777666667666667887788899999998
Q ss_pred CCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHH
Q 014724 164 DENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDML 243 (419)
Q Consensus 164 ~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~L 243 (419)
++ .++++++|+.|+..++.++++|||+|+++++.|++++... ..+...|..+..++++++++++.+|+++|
T Consensus 85 ~~----~~i~~~sGt~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~-----~~~~~~g~~~~~~~~~~~~~~~~~d~~~l 155 (407)
T 2dkj_A 85 AW----ANVQPHSGSQANMAVYMALMEPGDTLMGMDLAAGGHLTHG-----SRVNFSGKLYKVVSYGVRPDTELIDLEEV 155 (407)
T ss_dssp SE----EECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGT-----CTTSHHHHHSEEEEECCCTTTSSCCHHHH
T ss_pred Cc----ceEEecchHHHHHHHHHHhcCCCCEEEEecccccCccchH-----HHHHhcCceEEEEecCCCcccCccCHHHH
Confidence 76 3577899999999999999999999999999887764211 12334555556667665544678999999
Q ss_pred HHHhhhcCCeEEEEcCCCCCCcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCCCCcEEEeCCCCcCCCCCeeE
Q 014724 244 EKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGM 323 (419)
Q Consensus 244 e~~l~~~~pklIi~~~s~~p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~~~Div~~S~hK~l~GprgG~ 323 (419)
++.+++.++++|+++.|+||...|+++|.++|++||++||+|++|..|....+....+++..|++++|+||+++|+++|+
T Consensus 156 ~~~l~~~~~~~v~~~~p~~~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~l~g~~~G~ 235 (407)
T 2dkj_A 156 RRLALEHRPKVIVAGASAYPRFWDFKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPLPYAHVVTSTTHKTLRGPRGGL 235 (407)
T ss_dssp HHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCTTTCSEEEEESSGGGCCCSCEE
T ss_pred HHHHhhcCCeEEEEeccccCCCCCHHHHHHHHHHcCCEEEEEccccccccccCccCCccccccEEEEeccccCCCCCceE
Confidence 99997558999999889999888999999999999999999999987776555433334468999999999999999999
Q ss_pred EEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCc
Q 014724 324 IFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSD 403 (419)
Q Consensus 324 i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~ 403 (419)
++++++ ++.+.+.....++..++++...++++..++......+++++.+++.++++++.+.|++.|++++.+.+.
T Consensus 236 ~~~~~~-----~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 310 (407)
T 2dkj_A 236 ILSNDP-----ELGKRIDKLIFPGIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELARRGYRIVTGGTD 310 (407)
T ss_dssp EEESCH-----HHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCS
T ss_pred EEECCH-----HHHHHHHhhhcccccCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhCCceeecCCCC
Confidence 999842 677777655445555666666665666677765555678889999999999999999999988753346
Q ss_pred ceeEEEEeCC
Q 014724 404 NHLVLVDLRP 413 (419)
Q Consensus 404 ~hlv~vd~~~ 413 (419)
.+++++++..
T Consensus 311 ~~~~~~~~~~ 320 (407)
T 2dkj_A 311 NHLFLVDLRP 320 (407)
T ss_dssp SSEEEEECGG
T ss_pred ceEEEEECcc
Confidence 7889998864
No 10
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.95 E-value=6e-26 Score=230.54 Aligned_cols=292 Identities=16% Similarity=0.133 Sum_probs=204.5
Q ss_pred ccChhHH---HHHHHHHHHhhhcccccccCCCChHHHHHHHhhhhhccC----CCCCCCCCCCCchhHHHHHHHHHHHHH
Q 014724 85 EADPEVC---EIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKY----SEGLPGKRYYGGNEYIDELETLCQKRA 157 (419)
Q Consensus 85 ~~~~~~~---~~~~~e~~r~~~~i~L~~sen~~~~~V~eal~~~l~~~y----~~g~p~~r~~~g~~~~~~lE~~~~~~l 157 (419)
.+++++. +.+++|.+||...++.++++|. ++|++++.+...... .+||+..+ ...+++| +++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~n~--~~Vl~a~~~~~~~~~~~~~~~gy~Y~~-----~g~~~Le----~~l 83 (427)
T 3hvy_A 15 NINERVLELYERALNDVEKEFKYYDEIREYNQ--LKVLKAFQEERISESHFTNSSGYGYND-----IGRDSLD----RVY 83 (427)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHTTCCGGGSCCCCTTCTTC-----HHHHHHH----HHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhH--HHHHHHHHHHHHHHHhcccCcCCCCCc-----hhHHHHH----HHH
Confidence 5678877 5556777888899999999986 899999988644322 23443322 2245665 678
Q ss_pred HHHcCCCCCCCceeEe--cCChHHHHHHHHHHccCCCCEEEEeC-CCCCcccc--Cccccc-cccccccccccEEEeccc
Q 014724 158 LAAFNLDENKWGVNVQ--PLSGSPANFEVYTAILKPHDRIMGLD-LPHGGHLS--HGFMTP-KRRVSGTSIYFESMPYRL 231 (419)
Q Consensus 158 a~~~g~~~~~~~v~V~--~~sGt~A~~~~~~all~pGD~Vl~~~-~~~~g~~s--~~~~~~-~~~i~~~g~~~~~v~~~~ 231 (419)
++++|.+. +.++ ++||++||..++.++++|||+|++.+ +.|+++.. ++.... ...+...|. ++..++.
T Consensus 84 A~l~g~e~----alv~p~~~sGt~A~~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~--~~~~v~~ 157 (427)
T 3hvy_A 84 ANIFNTES----AFVRPHFVNGTHAIGAALFGNLRPNDTMMSICGMPYDTLHDIIGMDDSKKVGSLREYGV--KYKMVDL 157 (427)
T ss_dssp HHHHTCSE----EEEETTCCSHHHHHHHHHHHTCCTTCEEEECSSSCCGGGHHHHTCCTTCCSCCTGGGTC--EEEECCC
T ss_pred HHHhCCCc----eEEeCCCCcHHHHHHHHHHHhcCCCCEEEEeCCCCchhHHHHhccccchhhhHHHHcCC--EEEEecC
Confidence 89999886 3343 78999999999999999999999998 87766531 000000 001223454 4555544
Q ss_pred CCCCCCCCHHHHHHHhhh-cCCeEEEEcC----CCCCC--cCChHHHHHHHHH--hCCEEEEeccccccccccCCcCCCC
Q 014724 232 DESTGLVDYDMLEKTAIL-FRPKLIIAGA----SAYPR--DFDYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPF 302 (419)
Q Consensus 232 ~~~~~~iD~d~Le~~l~~-~~pklIi~~~----s~~p~--~~dl~~I~~ia~~--~ga~livD~ah~~Gl~~~g~~~~~~ 302 (419)
+++.+|+|++++++++ .++|+|++++ |+||+ ..|+++|+++|++ +|++|++|++|..+... ..|+
T Consensus 158 --~~~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg~v~dl~~i~~ia~~~~~g~~livD~a~~~~~~~----~~p~ 231 (427)
T 3hvy_A 158 --KDGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSLRIAEIAEIIKSIREVNENVIVFVDNCYGEFVEE----KEPT 231 (427)
T ss_dssp --BTTBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCCCHHHHHHHHHHHHHHCSSSEEEEECTTCTTTSS----SCGG
T ss_pred --CCCCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCccccHHHHHHHHHHHHHhCCCCEEEEECCccccccC----CCCc
Confidence 3688999999999974 4899999988 77873 5689999999999 89999999998665421 2344
Q ss_pred C-CCcEEEeCCCCcCCC---CCeeEEEEeCCCcchhhHHHHhhhcc-cCCCC--CCChHHHHHHHHHHHHHhcChHHHHH
Q 014724 303 K-YCDVVTTTTHKSLRG---PRGGMIFFKKDPVLGVELESAINNAV-FPGLQ--GGPHNHTIGGLAVCLKHAQSPEFKVY 375 (419)
Q Consensus 303 ~-~~Div~~S~hK~l~G---prgG~i~~~~~~~~~~~l~~~i~~~~-~~~~~--g~p~~~~iaala~al~~~~~~~~~~~ 375 (419)
+ ++|++++|+||+++| ++||++++++ ++.+++.... .+++. .++..... ..++..+. ....+
T Consensus 232 ~~gaDiv~~S~sK~lgg~g~~~GG~i~~~~------~li~~l~~~~~~~~~g~~~~~~~~~a---~~~~~gl~--~~~~r 300 (427)
T 3hvy_A 232 DVGADIIAGSLIKNIGGGIATTGGYIAGKE------EYVTQATFRVTVPGIGGECGSTFGVM---RSLYEGLF--MAPHV 300 (427)
T ss_dssp GGTCSEEEEETTSGGGTTTCCSCEEEEECH------HHHHHHHHHHSCTTTGGGCCCCTTCH---HHHHHHHH--HHHHH
T ss_pred ccCCeEEEECCcccccccccceEEEEEECH------HHHHHHHHHhhcCCcccccCCCHHHH---HHHHHhHh--HHHHH
Confidence 4 789999999999977 8899999987 6777776532 23321 12322211 11122221 23567
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEecCCCcce-----eEEEEeC
Q 014724 376 QNKVVSNCRALASRLVELGYKLVSGGSDNH-----LVLVDLR 412 (419)
Q Consensus 376 ~~~v~~n~~~l~~~L~~~G~~v~~~~t~~h-----lv~vd~~ 412 (419)
.++..+|+.++++.|+++|+++.++ .+| ++.+.+.
T Consensus 301 ~~~~~~~a~~la~~L~~~g~~V~p~--~~~~~~~li~~~~l~ 340 (427)
T 3hvy_A 301 TIEAVKGAVFCARIMELAGFDVLPK--YNDKRTDIIQAIKFN 340 (427)
T ss_dssp HHHHHHHHHHHHHHHHHTTCEEESC--TTSCCSSSEEEEECS
T ss_pred HHHHHHHHHHHHHHHHhCCCeecCC--CCCCCceEEEEEeCC
Confidence 8889999999999999999998653 555 7777764
No 11
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.94 E-value=2.4e-25 Score=226.15 Aligned_cols=290 Identities=15% Similarity=0.124 Sum_probs=200.0
Q ss_pred hhHHHHHHHHHHHhhhcccccccCCCChHHHHHHHhhhhhc--cC--CCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCC
Q 014724 88 PEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTN--KY--SEGLPGKRYYGGNEYIDELETLCQKRALAAFNL 163 (419)
Q Consensus 88 ~~~~~~~~~e~~r~~~~i~L~~sen~~~~~V~eal~~~l~~--~y--~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~ 163 (419)
.++++.++++.+++...|+.++.+|. ++|++|+.+.... .+ +.||. .+....+++| +++++++|.
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~a~~n~--~~Vl~A~~~~~~~~~~~~~~~gy~-----y~~~~~~~Le----~~lA~l~g~ 88 (427)
T 3i16_A 20 LKLYETAMNDIQNQFKILDDIREFNQ--LKVLNAFQEERISEAHFTNSSGYG-----YGDIGRDSLD----AVYARVFNT 88 (427)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHH--HHHHHHHHHTTCCGGGSCCCCTTC-----TTCHHHHHHH----HHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCH--HHHHHHHHHhchhHHhcCCCCCCC-----CCHHHHHHHH----HHHHHHhCC
Confidence 34566667777778888999888876 7799998764211 11 12222 1223345666 678899999
Q ss_pred CCCCCceeEe--cCChHHHHHHHHHHccCCCCEEEEeC-CCCCccccC-ccccc--cccccccccccEEEecccCCCCCC
Q 014724 164 DENKWGVNVQ--PLSGSPANFEVYTAILKPHDRIMGLD-LPHGGHLSH-GFMTP--KRRVSGTSIYFESMPYRLDESTGL 237 (419)
Q Consensus 164 ~~~~~~v~V~--~~sGt~A~~~~~~all~pGD~Vl~~~-~~~~g~~s~-~~~~~--~~~i~~~g~~~~~v~~~~~~~~~~ 237 (419)
+. +.++ ++||++||..++.++++|||+|++.+ +.|+++... +.... ...+...|. ++..++.+ +++.
T Consensus 89 e~----alv~p~~~sGt~Ai~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~--~~~~v~~~-~~g~ 161 (427)
T 3i16_A 89 ES----ALVRPHFVNGTHALGAALFGNLRPGNTMLSVCGEPYDTLHDVIGITENSNMGSLKEFGI--NYKQVDLK-EDGK 161 (427)
T ss_dssp SE----EEEETTCCSHHHHHHHHHHHHCCTTCEEEESSSSCCGGGHHHHTCSCCCSSCCTGGGTC--EEEECCCC-TTSS
T ss_pred cc----eEEeCCCccHHHHHHHHHHHHhCCCCEEEEeCCCccHHHHHHHhccccchHHHHHHcCC--EEEEecCc-cCCC
Confidence 86 3343 78999999999999999999999998 887765310 00000 001223344 55555555 3678
Q ss_pred CCHHHHHHHhhh-cCCeEEEEcC----CCCCC--cCChHHHHHHHHH--hCCEEEEeccccccccccCCcCCCCC-CCcE
Q 014724 238 VDYDMLEKTAIL-FRPKLIIAGA----SAYPR--DFDYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPFK-YCDV 307 (419)
Q Consensus 238 iD~d~Le~~l~~-~~pklIi~~~----s~~p~--~~dl~~I~~ia~~--~ga~livD~ah~~Gl~~~g~~~~~~~-~~Di 307 (419)
+|++++++.+++ .++|+|++++ |+||+ ..|+++|+++|++ +|+++++|++|..+... ..+++ ++|+
T Consensus 162 ~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg~i~dl~~i~~la~~~~~g~~livD~a~~~~~~~----~~p~~~gaDi 237 (427)
T 3i16_A 162 PNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLIEDIKSIVDCVKNIRKDIICFVDNCYGEFMDT----KEPTDVGADL 237 (427)
T ss_dssp CCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCCCHHHHHHHHHHHHHHCTTSEEEEECTTTTTSSS----SCGGGGTCSE
T ss_pred cCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcccHHHHHHHHHHHHHhCCCCEEEEECCCcccccc----CCccccCCeE
Confidence 999999999974 4799999988 77774 5689999999999 99999999998655421 23344 7899
Q ss_pred EEeCCCCcCCC---CCeeEEEEeCCCcchhhHHHHhhhccc-CCCC--CCChHHHHHHHHHHHHHhcChHHHHHHHHHHH
Q 014724 308 VTTTTHKSLRG---PRGGMIFFKKDPVLGVELESAINNAVF-PGLQ--GGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVS 381 (419)
Q Consensus 308 v~~S~hK~l~G---prgG~i~~~~~~~~~~~l~~~i~~~~~-~~~~--g~p~~~~iaala~al~~~~~~~~~~~~~~v~~ 381 (419)
+++|+||+++| ++||++++++ ++.+++..... +++. .+|.... + ..+++.+ .....+.++..+
T Consensus 238 v~~S~sK~lgg~g~~~gG~i~~~~------~li~~l~~~~~~~~~g~~~~~~~~~--a-~~~l~gl--~~~~~r~~~~~~ 306 (427)
T 3i16_A 238 IAGSLIKNIGGGIAPTGGYLAGTK------DCIEKTSYRLTVPGIGGECGSTFGV--V-RSMYQGL--FLAPHISMEALK 306 (427)
T ss_dssp EEEETTSGGGTTTCCSCEEEEECH------HHHHHHHHHHSCTTTGGGCCCCTTC--H-HHHHHHH--HHHHHHHHHHHH
T ss_pred EEecCcccCCCCCCceEEEEEECH------HHHHHHHHhcccCccCccCCccHHH--H-HHHHHHH--HHHHHHHHHHHH
Confidence 99999999977 8899999987 67777765322 2211 1221110 1 1122222 123567889999
Q ss_pred HHHHHHHHHHhCCcEEecCCCcce-----eEEEEeC
Q 014724 382 NCRALASRLVELGYKLVSGGSDNH-----LVLVDLR 412 (419)
Q Consensus 382 n~~~l~~~L~~~G~~v~~~~t~~h-----lv~vd~~ 412 (419)
|+.++++.|+++|++++++ .+| ++.|.+.
T Consensus 307 ~a~~la~~L~~~g~~V~p~--~~~~~~~~i~~i~l~ 340 (427)
T 3i16_A 307 GAILCSRIMELAGFEVMPK--YDEKRSDIIQSIKFN 340 (427)
T ss_dssp HHHHHHHHHHHTTCEEESC--TTSCCSSSCEEEECS
T ss_pred HHHHHHHHHHhCCCeecCC--CCCCCccEEEEEEEC
Confidence 9999999999999998653 566 7777774
No 12
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.93 E-value=1.7e-24 Score=214.27 Aligned_cols=275 Identities=17% Similarity=0.101 Sum_probs=192.4
Q ss_pred ccccccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHH
Q 014724 105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEV 184 (419)
Q Consensus 105 i~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~ 184 (419)
+.+.+++..+++.|++++.+.+...+ +.. ..++.+.+++++++++|++.+ +...+++++|++|+. +
T Consensus 4 ~~~~~gp~~~~~~v~~a~~~~~~~~~-----------~~~-~~~~~~~~~~~la~~~~~~~~-~~~v~~~~g~t~al~-~ 69 (384)
T 3zrp_A 4 LLLHVGPTTIKEDVLVAGLENNVGFT-----------SKE-FVEALAYSLKGLRYVMGASKN-YQPLIIPGGGTSAME-S 69 (384)
T ss_dssp --CCSSCSCCCHHHHHHTTCCSCCTT-----------SHH-HHHHHHHHHHHHHHHHTCCTT-SEEEEEESCHHHHHH-H
T ss_pred eeccCCCCCCCHHHHHHhhccccccc-----------cHH-HHHHHHHHHHHHHHHhCCCCC-CcEEEEcCCcHHHHH-H
Confidence 56778888899999999987653221 111 123444567899999999862 112355566788999 9
Q ss_pred HHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC
Q 014724 185 YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR 264 (419)
Q Consensus 185 ~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~ 264 (419)
+.++++|||+|++++++|.+.. +. ..+...|. +++.++++ .++.+|+++|++.++++++++|++++++||+
T Consensus 70 ~~~~~~~gd~vi~~~~~~~~~~---~~---~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~npt 140 (384)
T 3zrp_A 70 VTSLLKPNDKILVVSNGVFGDR---WE---QIFKRYPV--NVKVLRPS-PGDYVKPGEVEEEVRKSEYKLVALTHVETST 140 (384)
T ss_dssp GGGGCCTTCEEEEECSSHHHHH---HH---HHHTTSSC--EEEEECCS-TTCCCCHHHHHHHHHHSCEEEEEEESEETTT
T ss_pred HHhhcCCCCEEEEecCCcchHH---HH---HHHHHcCC--cEEEecCC-CCCCCCHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 9999999999999988654321 10 01133455 45555555 3678999999999987679999999888774
Q ss_pred --cCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcCCCCC-eeEEEEeCCCcchhhHHHH
Q 014724 265 --DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPR-GGMIFFKKDPVLGVELESA 339 (419)
Q Consensus 265 --~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l~Gpr-gG~i~~~~~~~~~~~l~~~ 339 (419)
..|+++|.++|++||++||+|++|..|.. +..+. ++|++++|+||+|.|+. .|+++.++ ++.+.
T Consensus 141 G~~~~l~~i~~l~~~~~~~li~D~a~~~~~~-----~~~~~~~~~d~~~~s~~K~~~~~~g~g~~~~~~------~~~~~ 209 (384)
T 3zrp_A 141 GVREPVKDVINKIRKYVELIVVDGVSSVGAE-----EVKAEEWNVDVYLTASQKALGSAAGLGLLLLSP------KALSI 209 (384)
T ss_dssp TEECCHHHHHHHHGGGEEEEEEECTTTTTTS-----CCCTTTTTCSEEEEETTSTTCCCSSEEEEEECH------HHHHH
T ss_pred ceECcHHHHHHHHHhcCCEEEEECcccccCc-----cccccccCCCEEEecCcccccCCCceEEEEECH------HHHHH
Confidence 67899999999999999999999876533 12232 68999999999997665 59998887 45444
Q ss_pred h-------------hhc-----c----cCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEE
Q 014724 340 I-------------NNA-----V----FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKL 397 (419)
Q Consensus 340 i-------------~~~-----~----~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v 397 (419)
+ ... . .....|+++...++++..++......++++..+++.++++++.+.|++.|+++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~ 289 (384)
T 3zrp_A 210 LDSQNSIAGYYLDLRNWLPVMRGAEEGKAAYFATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAIRAGLEALGLEI 289 (384)
T ss_dssp HHHCCCSCCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCB
T ss_pred hcCCCCCCcccccHHHHHHHHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHCCCeE
Confidence 4 100 0 11112456666666766677765534467888999999999999999999887
Q ss_pred ecCC---CcceeEEEEeCC
Q 014724 398 VSGG---SDNHLVLVDLRP 413 (419)
Q Consensus 398 ~~~~---t~~hlv~vd~~~ 413 (419)
.... ...+++++++..
T Consensus 290 ~~~~~~~~~~~~~~~~~~~ 308 (384)
T 3zrp_A 290 VARRPESYSNTVTGVILKV 308 (384)
T ss_dssp SCSSGGGBCSSEEEEECSS
T ss_pred ccCcccccCccEEEEECCC
Confidence 6532 135677787754
No 13
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.93 E-value=3.3e-24 Score=214.58 Aligned_cols=276 Identities=15% Similarity=0.115 Sum_probs=195.8
Q ss_pred hcccccccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHH
Q 014724 103 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF 182 (419)
Q Consensus 103 ~~i~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~ 182 (419)
..+.+.+++..+++.|++++.+.+...+ +..+ .++.+.+++++++++|.+.++ ..++++||++|+.
T Consensus 13 ~~~~~~pgp~~~~~~v~~a~~~~~~~~~-----------~~~~-~~~~~~~~~~la~~~~~~~~~--~v~~~~sgt~al~ 78 (411)
T 3nnk_A 13 SRLLMGPGPINADPRVLRAMSSQLIGQY-----------DPAM-THYMNEVMALYRGVFRTENRW--TMLVDGTSRAGIE 78 (411)
T ss_dssp CCEEESSSCCCCCHHHHHHHTSCCCCTT-----------CHHH-HHHHHHHHHHHHHHHTCCCSE--EEEEESCHHHHHH
T ss_pred cceeecCCCCCCCHHHHHHhhccccccc-----------cHHH-HHHHHHHHHHHHHHhCCCCCc--EEEECCCcHHHHH
Confidence 3466778888899999999976542211 1122 233445678999999998642 2244557789999
Q ss_pred HHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC
Q 014724 183 EVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 262 (419)
Q Consensus 183 ~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~ 262 (419)
.++.++++|||+|++.++.|.+.. .. ..+...|. +++.++++ +++.+|+++|++.+++.++++|++++++|
T Consensus 79 ~~~~~~~~~gd~Vl~~~~~~~~~~-~~-----~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~n 149 (411)
T 3nnk_A 79 AILVSAIRPGDKVLVPVFGRFGHL-LC-----EIARRCRA--EVHTIEVP-WGEVFTPDQVEDAVKRIRPRLLLTVQGDT 149 (411)
T ss_dssp HHHHHHCCTTCEEEEEECSHHHHH-HH-----HHHHHTTC--EEEEEECC-TTCCCCHHHHHHHHHHHCCSEEEEESEET
T ss_pred HHHHHhcCCCCEEEEecCCchHHH-HH-----HHHHHcCC--eEEEEecC-CCCCCCHHHHHHHHhhCCCeEEEEeCCCC
Confidence 999999999999999998765421 00 12234455 44444454 46789999999999866899999998887
Q ss_pred CC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcCCCCCe-eEEEEeCCCcchhhHH
Q 014724 263 PR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELE 337 (419)
Q Consensus 263 p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~ 337 (419)
|+ ..|+++|+++|++||++||+|++|..|.. +..+. ++|++++|+||++.||.| |+++.++ ++.
T Consensus 150 ptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~-----~~~~~~~~~d~~~~s~~K~l~~~~g~g~~~~~~------~~~ 218 (411)
T 3nnk_A 150 STTMLQPLAELGEICRRYDALFYTDATASLGGN-----PLETDVWGLDAVSAGMQKCLGGPSGTSPITLSA------RME 218 (411)
T ss_dssp TTTEECCCTTHHHHHHHHTCEEEEECTTTBTTB-----CCCTTTTTCSEEECCSTTTTCCCSSEEEEEECH------HHH
T ss_pred CcceeccHHHHHHHHHHcCCEEEEECCcccCCc-----ccchhccCCcEEEecCccccCCCCceEEEEECH------HHH
Confidence 74 57899999999999999999999876532 12222 689999999999767655 8988887 565
Q ss_pred HHhhhcc-----------------------------------cCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHH
Q 014724 338 SAINNAV-----------------------------------FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN 382 (419)
Q Consensus 338 ~~i~~~~-----------------------------------~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n 382 (419)
+.+.... .....++++...++++..++......++++..+++.++
T Consensus 219 ~~~~~~~~~~~~~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~ 298 (411)
T 3nnk_A 219 EAIRRRKCVEEGIRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARLILQEGLDYGIARHKLH 298 (411)
T ss_dssp HHHHTTCCCCGGGCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred HHHhhcccccccccccccccccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 5554321 00122455666666766677766533467888999999
Q ss_pred HHHHHHHHHhCCcEEecCC--CcceeEEEEeC
Q 014724 383 CRALASRLVELGYKLVSGG--SDNHLVLVDLR 412 (419)
Q Consensus 383 ~~~l~~~L~~~G~~v~~~~--t~~hlv~vd~~ 412 (419)
++++.+.|++.|+++..+. ...+++++.+.
T Consensus 299 ~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~ 330 (411)
T 3nnk_A 299 GDALVKGIQAMGLETFGDLKHKMNNVLGVVIP 330 (411)
T ss_dssp HHHHHHHHHHTTCCBCSCGGGBCSSEEEEECC
T ss_pred HHHHHHHHHHcCCEeCCCcccccccEEEEECC
Confidence 9999999999998877422 13567777763
No 14
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.93 E-value=6.3e-24 Score=212.88 Aligned_cols=276 Identities=11% Similarity=0.098 Sum_probs=194.7
Q ss_pred hcccccccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHH
Q 014724 103 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF 182 (419)
Q Consensus 103 ~~i~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~ 182 (419)
..+.+.+++..++++|++++.+.....+ ... ..++.+.+++++++++|.+.+ + +.++++||++|+.
T Consensus 11 ~~~~~~p~p~~~~~~v~~a~~~~~~~~~-----------~~~-~~~~~~~l~~~la~~~g~~~~-~-~~~~~~s~t~al~ 76 (416)
T 3isl_A 11 LRTIMTPGPVEVDPRVLRVMSTPVVGQF-----------DPA-FTGIMNETMEMLRELFQTKNR-W-AYPIDGTSRAGIE 76 (416)
T ss_dssp CCEECSSSSCCCCHHHHHHTTSCCCCTT-----------SHH-HHHHHHHHHHHHHHHTTCCCS-E-EEEEESCHHHHHH
T ss_pred cceeecCCCcCcCHHHHHHhcccCCCCc-----------cHH-HHHHHHHHHHHHHHHhCCCCC-c-EEEecCcHHHHHH
Confidence 4466788888899999999865321111 111 234444667899999998874 2 2235667889999
Q ss_pred HHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC
Q 014724 183 EVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 262 (419)
Q Consensus 183 ~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~ 262 (419)
.++.++++|||+|+++++.|.++. +. ..+...|. +++.++++ .++.+|+++|++.+++.++++|++++++|
T Consensus 77 ~~~~~l~~~gd~Vl~~~~~~~~~~---~~---~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~n 147 (416)
T 3isl_A 77 AVLASVIEPEDDVLIPIYGRFGYL---LT---EIAERYGA--NVHMLECE-WGTVFDPEDIIREIKKVKPKIVAMVHGET 147 (416)
T ss_dssp HHHHHHCCTTCEEEEEESSHHHHH---HH---HHHHHTTC--EEEEEECC-TTCCCCHHHHHHHHHHHCCSEEEEESEET
T ss_pred HHHHHhcCCCCEEEEecCCcccHH---HH---HHHHhcCC--eeEEEecC-CCCCCCHHHHHHHHhhCCCcEEEEEccCC
Confidence 999999999999999998765421 10 12234565 44444454 35789999999999856899999998888
Q ss_pred CC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcCCCCCe-eEEEEeCCCcchhhHH
Q 014724 263 PR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELE 337 (419)
Q Consensus 263 p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~ 337 (419)
|+ ..|+++|.++|++||++||+|++|..|.. +..+. ++|++++|+||++.||.| |+++.++ ++.
T Consensus 148 ptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~-----~~~~~~~~~d~~~~s~~K~l~g~~g~g~~~~~~------~~~ 216 (416)
T 3isl_A 148 STGRIHPLKAIGEACRTEDALFIVDAVATIGGC-----EVKVDEWKIDAAIGGTQKCLSVPSGMAPITYNE------RVA 216 (416)
T ss_dssp TTTEECCCHHHHHHHHHTTCEEEEECTTTTTTS-----CCCTTTTTCSEEECCSSSTTCCCSSEEEEEECH------HHH
T ss_pred CCceecCHHHHHHHHHHcCCEEEEECCccccCC-----CcchhhcCCCEEEecCccccCCCCCeEEEEECH------HHH
Confidence 74 67899999999999999999999876543 12222 689999999999777755 8888887 455
Q ss_pred HHhhhc-------------------------------------ccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHH
Q 014724 338 SAINNA-------------------------------------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVV 380 (419)
Q Consensus 338 ~~i~~~-------------------------------------~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~ 380 (419)
+.+... ......++++...++++..++......++++..+++.
T Consensus 217 ~~~~~~~~~~~Gw~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~ 296 (416)
T 3isl_A 217 DVIAARKKVERGIATQADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLVLEEGLETRFERHR 296 (416)
T ss_dssp HHHHTC------------------CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred HHhhccccccccccccccchhccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 544321 0111234556666666666777655333788899999
Q ss_pred HHHHHHHHHHHhCCcEEecCCC--cceeEEEEeC
Q 014724 381 SNCRALASRLVELGYKLVSGGS--DNHLVLVDLR 412 (419)
Q Consensus 381 ~n~~~l~~~L~~~G~~v~~~~t--~~hlv~vd~~ 412 (419)
++++++.+.|++.|+++..... ..+++++.+.
T Consensus 297 ~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~ 330 (416)
T 3isl_A 297 HHEAALAAGIKAMGLRLFGDDSCKMPVVTCVEIP 330 (416)
T ss_dssp HHHHHHHHHHHHTTCCBCSCGGGBCTTEEEEECC
T ss_pred HHHHHHHHHHHHcCCEeccCccccCCcEEEEeCC
Confidence 9999999999999988775311 2466777763
No 15
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.93 E-value=9.1e-24 Score=209.41 Aligned_cols=273 Identities=12% Similarity=0.080 Sum_probs=192.1
Q ss_pred ccccccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCC-CCCCceeEecCChHHHHHH
Q 014724 105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGSPANFE 183 (419)
Q Consensus 105 i~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~-~~~~~v~V~~~sGt~A~~~ 183 (419)
....+++..+++.|++++.+.+.++| . .. ...+.+.+++++++++|.+ .+ ..+++++|++|+..
T Consensus 22 ~l~~~~~~~~~~~v~~a~~~~~~~~~----------~-~~-~~~~~~~~~~~la~~~g~~~~~---~v~~~~g~t~a~~~ 86 (386)
T 2dr1_A 22 KLFTAGPVACFPEVLEIMKVQMFSHR----------S-KE-YRKVHMDTVERLREFLEVEKGE---VLLVPSSGTGIMEA 86 (386)
T ss_dssp EECCSSSCCCCHHHHHHTTSCCCCTT----------S-HH-HHHHHHHHHHHHHHHHTCSSSE---EEEESSCHHHHHHH
T ss_pred eeecCCCcCCcHHHHHHHhccccccc----------C-HH-HHHHHHHHHHHHHHHhCCCCCc---EEEEeCChHHHHHH
Confidence 33445667789999999987654322 1 11 2345556778999999997 32 22455667889999
Q ss_pred HHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhh-cCCeEEEEcCCCC
Q 014724 184 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL-FRPKLIIAGASAY 262 (419)
Q Consensus 184 ~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~-~~pklIi~~~s~~ 262 (419)
++.++++|||+|+++++.|.++. .. ..+...|. +++.++.+ .++.+|+++|++.+++ .++++|++++++|
T Consensus 87 ~~~~l~~~gd~vl~~~~~~~~~~-~~-----~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~n 157 (386)
T 2dr1_A 87 SIRNGVSKGGKVLVTIIGAFGKR-YK-----EVVESNGR--KAVVLEYE-PGKAVKPEDLDDALRKNPDVEAVTITYNET 157 (386)
T ss_dssp HHHHHSCTTCEEEEEESSHHHHH-HH-----HHHHHTTC--EEEEEECC-TTCCCCHHHHHHHHHHCTTCCEEEEESEET
T ss_pred HHHHhhcCCCeEEEEcCCchhHH-HH-----HHHHHhCC--ceEEEecC-CCCCCCHHHHHHHHhcCCCCcEEEEEeecC
Confidence 99999999999999998876521 00 12234454 45555555 3578999999999964 4789999888777
Q ss_pred CC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcCCCCC-eeEEEEeCCCcchhhHH
Q 014724 263 PR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPR-GGMIFFKKDPVLGVELE 337 (419)
Q Consensus 263 p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l~Gpr-gG~i~~~~~~~~~~~l~ 337 (419)
|+ ..|+++|.++|++||++||+|++|..|.. +.++. ++|++++|+||+|.+|. .|++++++ ++.
T Consensus 158 ptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~-----~~~~~~~~~di~~~s~sK~~~~~~g~G~~~~~~------~~~ 226 (386)
T 2dr1_A 158 STGVLNPLPELAKVAKEHDKLVFVDAVSAMGGA-----DIKFDKWGLDVVFSSSQKAFGVPPGLAIGAFSE------RFL 226 (386)
T ss_dssp TTTEECCHHHHHHHHHHTTCEEEEECTTTBTTB-----CCCTTTTTCSEEEEETTSTTCCCSSCEEEEECH------HHH
T ss_pred CcchhCCHHHHHHHHHHcCCeEEEEccccccCc-----cccccccCCcEEEEeccccccCCCceEEEEECH------HHH
Confidence 64 57899999999999999999999876643 11232 67999999999998774 59999987 555
Q ss_pred HHhhh----------------cc-cCCCCCCChHHHHHHHHHHHHHhcCh-HHHHHHHHHHHHHHHHHHHHHhCCcEEec
Q 014724 338 SAINN----------------AV-FPGLQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVELGYKLVS 399 (419)
Q Consensus 338 ~~i~~----------------~~-~~~~~g~p~~~~iaala~al~~~~~~-~~~~~~~~v~~n~~~l~~~L~~~G~~v~~ 399 (419)
+.+.. .. .....++++...++++..+++..... ++++..+++.++++++.+.|++.|+++..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 306 (386)
T 2dr1_A 227 EIAEKMPERGWYFDIPLYVKYLKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMVREGVREIGLDILA 306 (386)
T ss_dssp HHHTTCTTCCSTTCHHHHHHHHHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCCBSS
T ss_pred HHHhcCCCCceEEeHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeeCc
Confidence 54421 00 01122345555566666677765432 36788899999999999999998988765
Q ss_pred CC--CcceeEEEEeC
Q 014724 400 GG--SDNHLVLVDLR 412 (419)
Q Consensus 400 ~~--t~~hlv~vd~~ 412 (419)
.. ...+++++++.
T Consensus 307 ~~~~~~~~~~~~~~~ 321 (386)
T 2dr1_A 307 EPGHESPTITAVLTP 321 (386)
T ss_dssp CTTCBCSSEEEEECC
T ss_pred CccccCCceEEEEcC
Confidence 31 13677888874
No 16
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.92 E-value=5.6e-24 Score=212.12 Aligned_cols=277 Identities=20% Similarity=0.248 Sum_probs=195.4
Q ss_pred hcccccccCC---CChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHH
Q 014724 103 KSLELIASEN---FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP 179 (419)
Q Consensus 103 ~~i~L~~sen---~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~ 179 (419)
+.|++..+.. ..++.+++++.+.+.. +..++++.++..|.. .....+++++++++|.+. .+++++|++
T Consensus 44 ~~id~~~~~~~g~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~g~~---~~~~~l~~~la~~~~~~~-----~i~~~sGt~ 114 (399)
T 3tqx_A 44 EVLNFCANNYLGLADHPALIKTAQTVVEQ-YGFGMASVRFICGTQ---TIHKELEKDISEFLGTDD-----TILYSSCFD 114 (399)
T ss_dssp EEEECSSCCTTSCTTCHHHHHHHHHHHHH-HCSCCCSCCCCCCCB---HHHHHHHHHHHHHHTCSE-----EEEESCHHH
T ss_pred eEEEeeccCcccccCCHHHHHHHHHHHHH-hCCCCCCcCccccCc---hHHHHHHHHHHHHHCCCc-----EEEECchHH
Confidence 3466766632 1369999999888754 444555555544432 222234578888999764 478899999
Q ss_pred HHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhc-----CCeE
Q 014724 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-----RPKL 254 (419)
Q Consensus 180 A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~-----~pkl 254 (419)
|+..++.++++|||+|++..|.|+++.. .+...|. ++++++. +|+++|++.+++. ++++
T Consensus 115 a~~~~l~~~~~~gd~v~~~~~~~~~~~~--------~~~~~g~--~~~~~~~------~d~~~l~~~l~~~~~~~~~~~~ 178 (399)
T 3tqx_A 115 ANGGLFETLLGPEDAIISDELNHASIID--------GIRLCKA--QRYRYKN------NAMGDLEAKLKEADEKGARFKL 178 (399)
T ss_dssp HHHTTHHHHCCTTCEEEEETTCCHHHHH--------HHHSCCS--EEEEECT------TCTTHHHHHHHHHHTTTCSSEE
T ss_pred HHHHHHHHhcCCCCEEEECCcccHHHHH--------HHHHcCC--ceeEeCC------CCHHHHHHHHHhhhccCCCceE
Confidence 9999999999999999999998877542 2344555 4444432 5788999988753 7899
Q ss_pred EEEcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcC--C--C-CCCCcEEEeCCCCcCCCCCeeEEEEe
Q 014724 255 IIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--D--P-FKYCDVVTTTTHKSLRGPRGGMIFFK 327 (419)
Q Consensus 255 Ii~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~--~--~-~~~~Div~~S~hK~l~GprgG~i~~~ 327 (419)
|++++++||+ ..|+++|.++|++||++||+|++|..|........ . . .++.|++++|+||+|.|++||+++.+
T Consensus 179 v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~gG~~~~~ 258 (399)
T 3tqx_A 179 IATDGVFSMDGIIADLKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTLGKALGGASGGYTSGH 258 (399)
T ss_dssp EEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSCSSCCEEEEEC
T ss_pred EEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEecchHhcccCceEEEEcC
Confidence 9999888874 57899999999999999999999866653221100 0 0 12568999999999988999999998
Q ss_pred CCCcchhhHHHHhhhcccCC-CCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCccee
Q 014724 328 KDPVLGVELESAINNAVFPG-LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHL 406 (419)
Q Consensus 328 ~~~~~~~~l~~~i~~~~~~~-~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hl 406 (419)
+ ++.+.+.....+. ..++++...++++..+++... .+.++..+++.++++++.+.|++.|+++.. ...++
T Consensus 259 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~--~~~~~ 329 (399)
T 3tqx_A 259 K------EIIEWLRNRSRPYLFSNTVAPVIVATSLKVLELLK-TEGPQLRKQLQENSRYFRAGMEKLGFQLVP--GNHPI 329 (399)
T ss_dssp H------HHHHHHHHHCHHHHSSCCCCHHHHHHHHHHHHHHH-HTHHHHHHHHHHHHHHHHHHHHHHTCCBCC--CSSSE
T ss_pred H------HHHHHHHHhCcceeccCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHcCCCcCC--CCCCE
Confidence 7 5666655431111 123344444555555666543 346788899999999999999999998764 45677
Q ss_pred EEEEeCC
Q 014724 407 VLVDLRP 413 (419)
Q Consensus 407 v~vd~~~ 413 (419)
+|+++..
T Consensus 330 ~~~~~~~ 336 (399)
T 3tqx_A 330 IPVMLGD 336 (399)
T ss_dssp EEEEEEC
T ss_pred EEEEeCC
Confidence 8887743
No 17
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.92 E-value=1.1e-23 Score=212.78 Aligned_cols=292 Identities=17% Similarity=0.157 Sum_probs=194.2
Q ss_pred hHHHHHHHHHHHhhhcccccccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCC
Q 014724 89 EVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKW 168 (419)
Q Consensus 89 ~~~~~~~~e~~r~~~~i~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~ 168 (419)
++++.++++.+++...++.++..|. .+|++++..........+ +...|..+....+++| +.+++++|.+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~n~--~~vl~a~~~~~~~~~~~~-~~~~~~y~~~~~~~Le----~~lA~l~g~e~--- 76 (409)
T 3jzl_A 7 AIRKKVETQIDDLQNKTDEIAEFNQ--AKVLDAFQENKVSDFHFH-PSTGYGYDDEGRDTLE----RVYATVFKTEA--- 76 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHTTCCGGGGC-CCCTTCTTCHHHHHHH----HHHHHHHTCSE---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhH--HHHHHHHHHhhhhhhccC-CCcCCCCChhHHHHHH----HHHHHHhCCCc---
Confidence 3456666666667777777777763 678888877542111001 1111222233345555 57889999876
Q ss_pred ceeEe--cCChHHHHHHHHHHccCCCCEEEEeC-CCCCccccCccc-c-ccccccccccccEEEecccCCCCCCCCHHHH
Q 014724 169 GVNVQ--PLSGSPANFEVYTAILKPHDRIMGLD-LPHGGHLSHGFM-T-PKRRVSGTSIYFESMPYRLDESTGLVDYDML 243 (419)
Q Consensus 169 ~v~V~--~~sGt~A~~~~~~all~pGD~Vl~~~-~~~~g~~s~~~~-~-~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~L 243 (419)
+.++ ++||++|+..++.++++|||+|++.+ +.|++.....-. + ....+...|. ++..++.+ +++.+|++++
T Consensus 77 -alv~p~~~sGt~Ai~~al~all~~GD~Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G~--~~~~v~~~-~~g~~d~e~l 152 (409)
T 3jzl_A 77 -ALVRPQIISGTHAISTVLFGILRPDDELLYITGQPYDTLEEIVGIRKQGQGSLKDFHI--GYSSVPLL-ENGDVDFPRI 152 (409)
T ss_dssp -EEEETTSCSHHHHHHHHHHHHCCTTCEEEECSSSCCTTHHHHHTSSSSSSSCTGGGTC--EEEECCCC-TTSCCCHHHH
T ss_pred -EEEECCCccHHHHHHHHHHHhcCCCCEEEEeCCCCcHhHHHHHhcccchhhHHHHcCC--EEEEeCCC-CCCCcCHHHH
Confidence 3343 78999999999999999999999998 777665310000 0 0001223344 55555555 3688999999
Q ss_pred HHHhhhcCCeEEEEcC----CCCCC--cCChHHHHHHHHH--hCCEEEEeccccccccccCCcCCCCC-CCcEEEeCCCC
Q 014724 244 EKTAILFRPKLIIAGA----SAYPR--DFDYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHK 314 (419)
Q Consensus 244 e~~l~~~~pklIi~~~----s~~p~--~~dl~~I~~ia~~--~ga~livD~ah~~Gl~~~g~~~~~~~-~~Div~~S~hK 314 (419)
++.+++ ++|+|++++ ++|++ ..|+++|+++|++ +|+++++|++|..+... ..+.+ ++|++++|+||
T Consensus 153 ~~ai~~-~tklV~i~~s~g~p~nptg~v~~l~~I~~la~~~~~~~~livD~a~~~~~~~----~~p~~~g~Div~~S~sK 227 (409)
T 3jzl_A 153 AKKMTP-KTKMIGIQRSRGYADRPSFTIEKIKEMIVFVKNINPEVIVFVDNCYGEFVEY----QEPPEVGADIIAGSLIK 227 (409)
T ss_dssp HHHCCT-TEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTTSS----CCSGGGTCSEEEEETTS
T ss_pred HHhccC-CCeEEEEECCCCCCCCCcCccccHHHHHHHHHhhCCCCEEEEeCCccccccc----CCccccCCeEEEECccc
Confidence 999975 789999988 77774 5689999999999 99999999998655321 13344 78999999999
Q ss_pred cCCC---CCeeEEEEeCCCcchhhHHHHhhhcc-cCCC--CCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHH
Q 014724 315 SLRG---PRGGMIFFKKDPVLGVELESAINNAV-FPGL--QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALAS 388 (419)
Q Consensus 315 ~l~G---prgG~i~~~~~~~~~~~l~~~i~~~~-~~~~--~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~ 388 (419)
++.| +.||++++++ ++.+++.... .+++ ..++......++..+++ ....+.+++.+|++++++
T Consensus 228 ~lgg~~~~~GG~v~~~~------~li~~l~~~~~~~~~g~~~g~~~~~~~~~l~gl~-----~~~~r~~~~~~~a~~la~ 296 (409)
T 3jzl_A 228 NPGGGLAKTGGYIAGKE------ALVDLCGYRLTTPGIGREAGASLYSLLEMYQGFF-----LAPHVTAQAIKGARFTAA 296 (409)
T ss_dssp GGGTTTCSSCEEEEECH------HHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHH-----HHHHHHHHHHHHHHHHHH
T ss_pred cCCccCCceEEEEEeCH------HHHHHHHHHhccccccccccccHHHHHHHHHHHh-----hHHHHHHHHHHHHHHHHH
Confidence 9966 5689999987 6777765422 2222 12232211112222222 235678889999999999
Q ss_pred HHHhCCcEEecCCCcce-----eEEEEeC
Q 014724 389 RLVELGYKLVSGGSDNH-----LVLVDLR 412 (419)
Q Consensus 389 ~L~~~G~~v~~~~t~~h-----lv~vd~~ 412 (419)
.|+++|+++.++ .+| ++.|.+.
T Consensus 297 ~L~~~g~~v~p~--~~~~~~~~i~~i~l~ 323 (409)
T 3jzl_A 297 MLAEFGVEADPV--WDAPRTDLIQSVSFH 323 (409)
T ss_dssp HHHHTTCEEESC--TTSCCSSSCCEEECS
T ss_pred HHHhCCCcccCC--CCCCCccEEEEEEeC
Confidence 999999998653 455 6777664
No 18
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.92 E-value=5.3e-24 Score=212.03 Aligned_cols=276 Identities=12% Similarity=0.086 Sum_probs=193.8
Q ss_pred hcccccccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHH
Q 014724 103 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF 182 (419)
Q Consensus 103 ~~i~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~ 182 (419)
..+.+.+++..+++.|++++.+.+...| + .......+.+++++++++|+++++ ..+++++|++|+.
T Consensus 19 ~~~~~~~g~~~~~~~v~~a~~~~~~~~~-----------~-~~~~~~~~~l~~~la~~~g~~~~~--~i~~~~g~t~a~~ 84 (393)
T 2huf_A 19 NKLLMGPGPSNAPQRVLDAMSRPILGHL-----------H-PETLKIMDDIKEGVRYLFQTNNIA--TFCLSASGHGGME 84 (393)
T ss_dssp CCEECSSSCCCCCHHHHHHTTSCCCCTT-----------S-HHHHHHHHHHHHHHHHHHTCCCSE--EEEESSCHHHHHH
T ss_pred CeEEecCCCCCCCHHHHHHHHhhhccCC-----------C-HHHHHHHHHHHHHHHHHhCCCCCc--EEEEcCcHHHHHH
Confidence 3466777877789999999987654322 0 112233345678899999987631 1244566789999
Q ss_pred HHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC
Q 014724 183 EVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 262 (419)
Q Consensus 183 ~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~ 262 (419)
.++.++++|||+|+++++.|.++. .. ..+...|. +++.++++ .++.+|+++|++.+++.++++|++++++|
T Consensus 85 ~~~~~~~~~gd~vl~~~~~~~~~~--~~----~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~n 155 (393)
T 2huf_A 85 ATLCNLLEDGDVILIGHTGHWGDR--SA----DMATRYGA--DVRVVKSK-VGQSLSLDEIRDALLIHKPSVLFLTQGDS 155 (393)
T ss_dssp HHHHHHCCTTCEEEEEESSHHHHH--HH----HHHHHTTC--EEEEEECC-TTCCCCHHHHHHHHHHHCCSEEEEESEET
T ss_pred HHHHHHhCCCCEEEEECCCcchHH--HH----HHHHHcCC--eeEEEeCC-CCCCCCHHHHHHHHhccCCcEEEEEccCC
Confidence 999999999999999998775531 00 01123454 44445454 35689999999999754789999988887
Q ss_pred CC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcCCCCCe-eEEEEeCCCcchhhHH
Q 014724 263 PR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELE 337 (419)
Q Consensus 263 p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~ 337 (419)
|+ ..|+++|.++|++||++||+|++|..|.. +..+. ++|++++|+||+|.||.| |++++++ ++.
T Consensus 156 ptG~~~~l~~i~~~~~~~~~~li~D~a~~~~~~-----~~~~~~~~~d~~~~s~sK~l~g~~G~G~~~~~~------~~~ 224 (393)
T 2huf_A 156 STGVLQGLEGVGALCHQHNCLLIVDTVASLGGA-----PMFMDRWEIDAMYTGSQKVLGAPPGITPVSFSH------RAV 224 (393)
T ss_dssp TTTEECCCTTHHHHHHHTTCEEEEECTTTBTTB-----CCCTTTTTCSEEECCSSSTTCCCSSCEEEEECH------HHH
T ss_pred CccccCCHHHHHHHHHHcCCEEEEEcccccCCC-----CcchhhcCccEEEECCCcccccCCCeEEEEECH------HHH
Confidence 74 57899999999999999999999876532 11232 589999999999877766 8999886 566
Q ss_pred HHhhhc---ccC-------------------CCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCc
Q 014724 338 SAINNA---VFP-------------------GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGY 395 (419)
Q Consensus 338 ~~i~~~---~~~-------------------~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~ 395 (419)
+.+... ..+ ...++++...++++..+++.....++++..+++.++++++.+.|++.|+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 304 (393)
T 2huf_A 225 ERYKRRNTKVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMACEEGLPALIARHEDCAKRLYRGLQDAGF 304 (393)
T ss_dssp HHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHhhcCCCCceEEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 665432 111 1124556666666666777654334677888999999999999999898
Q ss_pred EEecCC-C-cceeEEEEeC
Q 014724 396 KLVSGG-S-DNHLVLVDLR 412 (419)
Q Consensus 396 ~v~~~~-t-~~hlv~vd~~ 412 (419)
+++... + ..+++++++.
T Consensus 305 ~~~~~~~~~~~~~~~~~~~ 323 (393)
T 2huf_A 305 ELYADPKDRLSTVTTIKVP 323 (393)
T ss_dssp CBSSCGGGBCTTEEEEECC
T ss_pred eeccCccccCCcEEEEEcC
Confidence 876431 1 2357777764
No 19
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.92 E-value=1.5e-23 Score=209.06 Aligned_cols=272 Identities=12% Similarity=0.055 Sum_probs=191.6
Q ss_pred cccccccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHH
Q 014724 104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 183 (419)
Q Consensus 104 ~i~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~ 183 (419)
.+.+.+++..+++.|++++.+.+.+.| . .. ..++.+.+++++++++|++++ + ..+++++|++|+..
T Consensus 35 ~~l~~~~~~~~~~~v~~a~~~~~~~~~----------~-~~-~~~~~~~~~~~la~~~g~~~~-~-~v~~t~g~t~al~~ 100 (393)
T 1vjo_A 35 RLLLGPGPSNAHPSVLQAMNVSPVGHL----------D-PA-FLALMDEIQSLLRYVWQTENP-L-TIAVSGTGTAAMEA 100 (393)
T ss_dssp CEECSSSCCCCCHHHHHHHSSCCCCTT----------S-HH-HHHHHHHHHHHHHHHHTCCCS-C-EEEESSCHHHHHHH
T ss_pred ceeccCCCCCCCHHHHHHHhccccccc----------C-HH-HHHHHHHHHHHHHHHhCCCCC-c-EEEEeCchHHHHHH
Confidence 345556677789999999987664322 1 11 234555677899999999753 1 12445566889999
Q ss_pred HHHHccCCCCEEEEeCCCCCc--cccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCC
Q 014724 184 VYTAILKPHDRIMGLDLPHGG--HLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 261 (419)
Q Consensus 184 ~~~all~pGD~Vl~~~~~~~g--~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~ 261 (419)
++.++++|||+|++++|.|.+ +. ..+...|. +++.++.+ .++.+|+++|++.+++.++++|++++++
T Consensus 101 ~~~~~~~~gd~Vl~~~~~~~~~~~~--------~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~l~~~~~~~v~~~~~~ 169 (393)
T 1vjo_A 101 TIANAVEPGDVVLIGVAGYFGNRLV--------DMAGRYGA--DVRTISKP-WGEVFSLEELRTALETHRPAILALVHAE 169 (393)
T ss_dssp HHHHHCCTTCEEEEEESSHHHHHHH--------HHHHHTTC--EEEEEECC-TTCCCCHHHHHHHHHHHCCSEEEEESEE
T ss_pred HHHhccCCCCEEEEEcCChhHHHHH--------HHHHHcCC--ceEEEecC-CCCCCCHHHHHHHHhhCCceEEEEeccC
Confidence 999999999999999987765 21 12234455 44555555 3578999999999975478999999888
Q ss_pred CCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcCCCCC-eeEEEEeCCCcchhhH
Q 014724 262 YPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPR-GGMIFFKKDPVLGVEL 336 (419)
Q Consensus 262 ~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l~Gpr-gG~i~~~~~~~~~~~l 336 (419)
||+ ..|+++|.++|+++|++||+|++|..|.. +..+. +.|++++|+||+|.+|. .|++++++ ++
T Consensus 170 nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~-----~~~~~~~~~di~~~s~sK~l~~~~~~G~l~~~~------~~ 238 (393)
T 1vjo_A 170 TSTGARQPLEGVGELCREFGTLLLVDTVTSLGGV-----PIFLDAWGVDLAYSCSQKGLGCSPGASPFTMSS------RA 238 (393)
T ss_dssp TTTTEECCCTTHHHHHHHHTCEEEEECTTTTTTS-----CCCTTTTTCSEEECCSSSTTCSCSSCEEEEECH------HH
T ss_pred CCcceeccHHHHHHHHHHcCCEEEEECCccccCc-----CCcccccCccEEEEcCcccccCCCceEEEEECH------HH
Confidence 774 57899999999999999999999875532 22232 67999999999987664 49999987 56
Q ss_pred HHHhhhc-------cc----------C-CCC-CCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEE
Q 014724 337 ESAINNA-------VF----------P-GLQ-GGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKL 397 (419)
Q Consensus 337 ~~~i~~~-------~~----------~-~~~-g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v 397 (419)
.+.+... .+ . ... ++++...++++..+++.....++++..+++.++++++.+.|++.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~ 318 (393)
T 1vjo_A 239 IEKLQRRRTKVANWYLDMNLLGKYWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDIGLSL 318 (393)
T ss_dssp HHHHHTCSSCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCB
T ss_pred HHHHhccCCCCCceecCcHhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 6655321 00 0 111 255555666666677765433467888999999999999999989887
Q ss_pred ecCCC--cceeEEEEe
Q 014724 398 VSGGS--DNHLVLVDL 411 (419)
Q Consensus 398 ~~~~t--~~hlv~vd~ 411 (419)
..... ..+++++.+
T Consensus 319 ~~~~~~~~~~~~~~~~ 334 (393)
T 1vjo_A 319 HVEKEYRLPTLTTVCI 334 (393)
T ss_dssp SSCGGGBCSSEEEEEC
T ss_pred cCCccccCCcEEEEEc
Confidence 65211 235677776
No 20
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.92 E-value=6.1e-23 Score=203.53 Aligned_cols=280 Identities=16% Similarity=0.065 Sum_probs=190.6
Q ss_pred cccccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHH
Q 014724 106 ELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVY 185 (419)
Q Consensus 106 ~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~ 185 (419)
.+......+++.|++++.+.+.+.+ +++. .+ ....++++.+++++++++|++.+ ..+++++|++|+..++
T Consensus 34 ~~~~~~~~~~~~v~~a~~~~~~~~~--~~~~--~~---~~~~~~~~~l~~~la~~~~~~~~---~i~~~~ggt~a~~~~~ 103 (397)
T 3f9t_A 34 IFGSMCSNVLPITRKIVDIFLETNL--GDPG--LF---KGTKLLEEKAVALLGSLLNNKDA---YGHIVSGGTEANLMAL 103 (397)
T ss_dssp BCSCSCCCCCTHHHHHHHHHTTCCT--TSGG--GB---HHHHHHHHHHHHHHHHHTTCTTC---EEEEESCHHHHHHHHH
T ss_pred eEEEecCCCcHHHHHHHHHHHhhcC--CCcc--cC---hhHHHHHHHHHHHHHHHhCCCCC---CEEEecCcHHHHHHHH
Confidence 3333445568899999988875433 2221 11 22356666788999999999874 1255667789999999
Q ss_pred HHccCC-------------CCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCC
Q 014724 186 TAILKP-------------HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRP 252 (419)
Q Consensus 186 ~all~p-------------GD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~p 252 (419)
.++.++ ||+|++.++.|.++.. .+...|. +++.++.+ +++.+|+++|++.+++.++
T Consensus 104 ~~~~~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~~~~ 172 (397)
T 3f9t_A 104 RCIKNIWREKRRKGLSKNEHPKIIVPITAHFSFEK--------GREMMDL--EYIYAPIK-EDYTIDEKFVKDAVEDYDV 172 (397)
T ss_dssp HHHHHHHHHHHHTTCCCCSSCEEEEETTCCTHHHH--------HHHHHTC--EEEEECBC-TTSSBCHHHHHHHHHHSCC
T ss_pred HHHHHHHHhhhhhcccCCCCeEEEECCcchhHHHH--------HHHHcCc--eeEEEeeC-CCCcCCHHHHHHHHhhcCC
Confidence 998776 9999999998877532 2334455 45555555 3688999999999976578
Q ss_pred eEEEEcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCc-------CCCCC---CCcEEEeCCCCcCC-CC
Q 014724 253 KLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV-------ADPFK---YCDVVTTTTHKSLR-GP 319 (419)
Q Consensus 253 klIi~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~-------~~~~~---~~Div~~S~hK~l~-Gp 319 (419)
++|++++++||+ ..|+++|.++|++||++||+|++|..+....... ..+++ ++|++++|+||++. +.
T Consensus 173 ~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~~ 252 (397)
T 3f9t_A 173 DGIIGIAGTTELGTIDNIEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSLGVDSITIDPHKMGHCPI 252 (397)
T ss_dssp CEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGGTCSEEECCTTTTTCCCS
T ss_pred eEEEEECCCCCCCCCCCHHHHHHHHHHhCCeEEEEccccchhhhhcccccccccccccccccccCCeEEEccccccCCCC
Confidence 898888888774 6799999999999999999999986543311100 01222 67999999999984 44
Q ss_pred CeeEEEEeCCCcchhhHHHHhhhcccCCC--------CCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHH
Q 014724 320 RGGMIFFKKDPVLGVELESAINNAVFPGL--------QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLV 391 (419)
Q Consensus 320 rgG~i~~~~~~~~~~~l~~~i~~~~~~~~--------~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~ 391 (419)
+.|+++.+++ .+.+.+... .+.. .+++......++..++..+...++++..+++.++++++.+.|+
T Consensus 253 ~~g~~~~~~~-----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 326 (397)
T 3f9t_A 253 PSGGILFKDI-----GYKRYLDVD-APYLTETRQATILGTRVGFGGACTYAVLRYLGREGQRKIVNECMENTLYLYKKLK 326 (397)
T ss_dssp SCEEEEESSG-----GGGGGTCEE-CTTSSSSEECSSCSSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEeCH-----HHHHhhccC-CccccCCCccccccccccchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7788888764 343333221 1111 1222222233444445444444567888999999999999999
Q ss_pred hCCcEEecCCCcceeEEEEeCC
Q 014724 392 ELGYKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 392 ~~G~~v~~~~t~~hlv~vd~~~ 413 (419)
+.|++++.. ...+++++++..
T Consensus 327 ~~g~~~~~~-~~~~~~~~~~~~ 347 (397)
T 3f9t_A 327 ENNFKPVIE-PILNIVAIEDED 347 (397)
T ss_dssp HTTCCBSSC-CSSSEEEEECTT
T ss_pred HCCCEEEcC-CCccEEEEEeCC
Confidence 999886643 456778887643
No 21
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.92 E-value=1.1e-23 Score=206.16 Aligned_cols=268 Identities=12% Similarity=0.002 Sum_probs=188.0
Q ss_pred ccccccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHH
Q 014724 105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEV 184 (419)
Q Consensus 105 i~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~ 184 (419)
+.+++++..+++.|++++.+.+...+ +... ......+++++++++|++++ ..+++++|++|+..+
T Consensus 3 ~l~~~~p~~~~~~v~~a~~~~~~~~~-----------~~~~-~~~~~~l~~~la~~~g~~~~---~i~~~~g~t~a~~~~ 67 (352)
T 1iug_A 3 WLLTPGPVRLHPKALEALARPQLHHR-----------TEAA-REVFLKARGLLREAFRTEGE---VLILTGSGTLAMEAL 67 (352)
T ss_dssp EECSSSSCCCCHHHHHHHHSCCCCTT-----------SHHH-HHHHHHHHHHHHHHHTCSSE---EEEEESCHHHHHHHH
T ss_pred ccccCCCCCCCHHHHHHhccCCCCcc-----------CHHH-HHHHHHHHHHHHHHhCCCCc---eEEEcCchHHHHHHH
Confidence 56788998899999999987764211 1111 12233466889999999753 224555778899999
Q ss_pred HHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC
Q 014724 185 YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR 264 (419)
Q Consensus 185 ~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~ 264 (419)
+.++++|||+|+++++.|.++. .. ..+...|. +++.++++ +++.+|+++|++ .++++|++++++||+
T Consensus 68 ~~~~~~~gd~vl~~~~~~~~~~-~~-----~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~----~~~~~v~~~~~~npt 134 (352)
T 1iug_A 68 VKNLFAPGERVLVPVYGKFSER-FY-----EIALEAGL--VVERLDYP-YGDTPRPEDVAK----EGYAGLLLVHSETST 134 (352)
T ss_dssp HHHHCCTTCEEEEEECSHHHHH-HH-----HHHHHTTC--EEEEEECC-TTCCCCTTTSCC----SSCSEEEEESEETTT
T ss_pred HHhccCCCCeEEEEeCCchhHH-HH-----HHHHHcCC--ceEEEeCC-CCCCCCHHHHhc----cCCcEEEEEEecCCc
Confidence 9999999999999998776642 10 01122454 44455454 356789988876 378999999888874
Q ss_pred --cCChHHHHHHHHHh--CCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcCCCCCe-eEEEEeCCCcchhhHH
Q 014724 265 --DFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELE 337 (419)
Q Consensus 265 --~~dl~~I~~ia~~~--ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~ 337 (419)
..|+++|.++|++| |++||+|++|..|.. +..+. ++|++++|+||++.||.| |++++++ ++.
T Consensus 135 G~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~-----~~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~------~~~ 203 (352)
T 1iug_A 135 GALADLPALARAFKEKNPEGLVGADMVTSLLVG-----EVALEAMGVDAAASGSQKGLMCPPGLGFVALSP------RAL 203 (352)
T ss_dssp TEECCHHHHHHHHHHHCTTCEEEEECTTTBTTB-----CCCSGGGTCSEEEEESSSTTCCCSCEEEEEECH------HHH
T ss_pred ceecCHHHHHHHHHhhCCCCEEEEECCccccCc-----ceeccccCeeEEEecCcccccCCCceeEEEECH------HHH
Confidence 67899999999999 999999999875532 11222 579999999998888765 9998877 333
Q ss_pred HH---------hh----hcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcc
Q 014724 338 SA---------IN----NAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDN 404 (419)
Q Consensus 338 ~~---------i~----~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~ 404 (419)
++ +. ........++++...++++..++..... ++++..+++.++++++.+.|++.|+++..+....
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~ 282 (352)
T 1iug_A 204 ERLKPRGYYLDLARELKAQKEGESAWTPAINLVLAVAAVLEEVLP-RLEEHLALKAWQNALLYGVGEEGGLRPVPKRFSP 282 (352)
T ss_dssp HTCCCCSSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHGG-GHHHHHHHHHHHHHHHHHHHHHTTCEESCSSBCT
T ss_pred HHhhCCCceeeHHHHHhhcccCCCCCCCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCcccccccCC
Confidence 32 11 1101112345556666666667776543 3778889999999999999999899876532245
Q ss_pred eeEEEEeC
Q 014724 405 HLVLVDLR 412 (419)
Q Consensus 405 hlv~vd~~ 412 (419)
+++++++.
T Consensus 283 ~~~~~~~~ 290 (352)
T 1iug_A 283 AVAAFYLP 290 (352)
T ss_dssp TCEEEECC
T ss_pred eEEEEEcC
Confidence 67888875
No 22
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.92 E-value=1.5e-23 Score=207.59 Aligned_cols=275 Identities=13% Similarity=0.073 Sum_probs=187.2
Q ss_pred hhcccccccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHH
Q 014724 102 FKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPAN 181 (419)
Q Consensus 102 ~~~i~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~ 181 (419)
....++.+++..++++|++++.+.+..++ +..+ .++.+.+++++++++|++.+. .+.++++||++|+
T Consensus 18 ~~~~~~~pgp~~~~~~v~~a~~~~~~~~~-----------~~~~-~~~~~~~~~~la~~~g~~~~~-~~i~~~~ggt~al 84 (376)
T 3f0h_A 18 QGMLNFTVGPVMSSEEVRAIGAEQVPYFR-----------TTEF-SSTMLENEKFMLEYAKAPEGS-KAVFMTCSSTGSM 84 (376)
T ss_dssp SSCEECSSSSCCCCHHHHHHHTSCCCCCS-----------SHHH-HHHHHHHHHHHHHHHTCCTTC-EEEEESSCHHHHH
T ss_pred cCceeecCCCCCCcHHHHHHhcCCCCCCC-----------CHHH-HHHHHHHHHHHHHHhCCCCCc-eEEEEcCChhHHH
Confidence 34688899998899999999977553211 1122 234445678999999997531 1223345679999
Q ss_pred HHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCC
Q 014724 182 FEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 261 (419)
Q Consensus 182 ~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~ 261 (419)
..++.++++|||+|+++++.+.++... ......|..+..++ .+ .++.+|+++|++.+. .++++|++++++
T Consensus 85 ~~~~~~~~~~gd~vi~~~~~~~~~~~~------~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~~~-~~~~~v~~~~~~ 154 (376)
T 3f0h_A 85 EAVVMNCFTKKDKVLVIDGGSFGHRFV------QLCEIHEIPYVALK--LE-HGKKLTKEKLYEYDN-QNFTGLLVNVDE 154 (376)
T ss_dssp HHHHHHHCCTTCCEEEEESSHHHHHHH------HHHHHTTCCEEEEE--CC-TTCCCCHHHHHTTTT-SCCCEEEEESEE
T ss_pred HHHHHhccCCCCeEEEEeCChhhHHHH------HHHHHcCCceEEEe--CC-CCCCCCHHHHHHhhc-cCceEEEEeccc
Confidence 999999999999999998754333210 01223455444444 44 357899999999775 479999998777
Q ss_pred CC--CcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcCCCCCe-eEEEEeCCCcchhhH
Q 014724 262 YP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVEL 336 (419)
Q Consensus 262 ~p--~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l~Gprg-G~i~~~~~~~~~~~l 336 (419)
|| ...|+++|+++|++||++||+|++|..|.. +..++ ++|++++|+||+|.|+.| |+++.++ ++
T Consensus 155 nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~-----~~~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~------~~ 223 (376)
T 3f0h_A 155 TSTAVLYDTMMIGEFCKKNNMFFVCDCVSAFLAD-----PFNMNECGADVMITGSQKVLACPPGISVIVLAP------RG 223 (376)
T ss_dssp TTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTS-----CCCHHHHTCSEEEEETTTTTCCCSSCEEEEECH------HH
T ss_pred CCcceecCHHHHHHHHHHcCCEEEEEcCccccCc-----cccccccCccEEEecCcccccCCCceEEEEECH------HH
Confidence 76 467899999999999999999999865432 11222 589999999999985655 8888877 56
Q ss_pred HHHhhhcccC----------------CCCCCChHHHHHHHHHHHHHhcCh-HHHHHHHHHHHHHHHHHHHHHhCCcEEec
Q 014724 337 ESAINNAVFP----------------GLQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVELGYKLVS 399 (419)
Q Consensus 337 ~~~i~~~~~~----------------~~~g~p~~~~iaala~al~~~~~~-~~~~~~~~v~~n~~~l~~~L~~~G~~v~~ 399 (419)
.+.+...... +...++....++++..++..+... ++++..++..++++++.+.|++.|+++..
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 303 (376)
T 3f0h_A 224 VERVEKSKVRTMYFDLKDALKNQERGQTPFTPAVGILLQINERLKEIKKHGGADAEVARIASQAADFRAKIKDLPFELVS 303 (376)
T ss_dssp HHHHHTCCCCCSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTTSSEEECC
T ss_pred HHHhhcCCCCceeecHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCccCc
Confidence 5555432111 112244444456666667665533 46788889999999999999999988765
Q ss_pred CCCcceeEEEE
Q 014724 400 GGSDNHLVLVD 410 (419)
Q Consensus 400 ~~t~~hlv~vd 410 (419)
......++.+.
T Consensus 304 ~~~~~~~~~~~ 314 (376)
T 3f0h_A 304 ESPANGVTSVH 314 (376)
T ss_dssp SSBBTTEEEEE
T ss_pred cccCceEEEEe
Confidence 33333444333
No 23
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.92 E-value=1e-23 Score=209.34 Aligned_cols=276 Identities=13% Similarity=0.065 Sum_probs=191.6
Q ss_pred hcccccccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHH
Q 014724 103 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF 182 (419)
Q Consensus 103 ~~i~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~ 182 (419)
..+.+.+++..+++.|++++.+.+...+ + .. ...+...+++++++++|.+..++ .+++++|++|+.
T Consensus 23 ~~~~~~p~p~~~~~~v~~a~~~~~~~~~---~--------~~-~~~~~~~l~~~la~~~~~~~~~~--v~~~~gg~~al~ 88 (393)
T 3kgw_A 23 TRLLLGPGPSNLAPRVLAAGSLRMIGHM---Q--------KE-MLQIMEEIKQGIQYVFQTRNPLT--LVVSGSGHCAME 88 (393)
T ss_dssp CCEECSSSCCCCCHHHHHHTTCCCCCTT---S--------HH-HHHHHHHHHHHHHHHHTCCCSEE--EEESCCTTTHHH
T ss_pred cceeccCCCCCCCHHHHHHhcccccCcc---c--------HH-HHHHHHHHHHHHHHHhCCCCCcE--EEEeCCcHHHHH
Confidence 4466888888899999999976442211 1 11 12344456788999999876421 245567789999
Q ss_pred HHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC
Q 014724 183 EVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 262 (419)
Q Consensus 183 ~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~ 262 (419)
.++.++++|||+|+++.+.+.++. +. ..+...|. +++.++.+ .++.+|+++|++.+++.++++|++++++|
T Consensus 89 ~~~~~~~~~gd~vl~~~~~~~~~~---~~---~~~~~~g~--~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~n 159 (393)
T 3kgw_A 89 TALFNLLEPGDSFLTGTNGIWGMR---AA---EIADRIGA--RVHQMIKK-PGEHYTLQEVEEGLAQHKPVLLFLVHGES 159 (393)
T ss_dssp HHHHHHCCTTCEEEEEESSHHHHH---HH---HHHHHTTC--EEEEEECC-TTCCCCHHHHHHHHHHHCCSEEEEESEET
T ss_pred HHHHhcCCCCCEEEEEeCCchhHH---HH---HHHHHcCC--ceEEEeCC-CCCCCCHHHHHHHHhhCCCcEEEEeccCC
Confidence 999999999999999876542210 00 12234455 44444444 35689999999999866899999998888
Q ss_pred CC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcCCCCCe-eEEEEeCCCcchhhHH
Q 014724 263 PR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELE 337 (419)
Q Consensus 263 p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~ 337 (419)
|+ ..|+++|.++|++||++||+|++|..|.. +..++ ++|++++|+||++.|+.| |++++++ ++.
T Consensus 160 ptG~~~~l~~i~~l~~~~~~~li~De~~~~g~~-----~~~~~~~~~d~~~~s~sK~~~~~~g~g~~~~~~------~~~ 228 (393)
T 3kgw_A 160 STGVVQPLDGFGELCHRYQCLLLVDSVASLGGV-----PIYMDQQGIDIMYSSSQKVLNAPPGISLISFND------KAK 228 (393)
T ss_dssp TTTEECCCTTHHHHHHHTTCEEEEECTTTTTTS-----CCCTTTTTCCEEEEESSSTTCCCSSCEEEEECH------HHH
T ss_pred cchhhccHHHHHHHHHHcCCEEEEECCccccCc-----ccchhhcCCCEEEecCcccccCCCceeEEEECH------HHH
Confidence 74 56899999999999999999999875532 11222 679999999999976655 9998887 565
Q ss_pred HHhhhcccC----------------------CCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCc
Q 014724 338 SAINNAVFP----------------------GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGY 395 (419)
Q Consensus 338 ~~i~~~~~~----------------------~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~ 395 (419)
+.+.....+ ...++++...++++..++......++++..+++.++++++.+.|++.|+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 308 (393)
T 3kgw_A 229 YKVYSRKTKPVSFYTDITYLAKLWGCEGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWRRHREATAHLHKHLQEMGL 308 (393)
T ss_dssp HHHHTCSSCCSCSTTCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHhccCCCCCceeecHHHHHHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 555432110 1123555666666666776654444688899999999999999999998
Q ss_pred EEecCC--C-cceeEEEEeC
Q 014724 396 KLVSGG--S-DNHLVLVDLR 412 (419)
Q Consensus 396 ~v~~~~--t-~~hlv~vd~~ 412 (419)
++.... . ..+++++.+.
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~ 328 (393)
T 3kgw_A 309 KFFVKDPEIRLPTITTVTVP 328 (393)
T ss_dssp CBSSSSGGGBCSSEEEEECC
T ss_pred eeccCChhhcCCeEEEEeCC
Confidence 876321 1 2345666653
No 24
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.92 E-value=2e-23 Score=203.98 Aligned_cols=273 Identities=14% Similarity=0.061 Sum_probs=189.3
Q ss_pred ccccccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHH
Q 014724 105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEV 184 (419)
Q Consensus 105 i~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~ 184 (419)
+.+++++..+++.|++++.+.+.+.+ +.. ..+..+.+++++++++|.+.+ ....+++++|++|+..+
T Consensus 2 ~~~~~gp~~~~~~v~~a~~~~~~~~~-----------~~~-~~~~~~~l~~~la~~~g~~~~-~~~v~~t~g~t~a~~~~ 68 (353)
T 2yrr_A 2 LLLTPGPTPIPERVQKALLRPMRGHL-----------DPE-VLRVNRAIQERLAALFDPGEG-ALVAALAGSGSLGMEAG 68 (353)
T ss_dssp EECSSSSCCCCHHHHGGGGSCCCCTT-----------CHH-HHHHHHHHHHHHHHHHCCCTT-CEEEEESSCHHHHHHHH
T ss_pred ccCCCCCCCCCHHHHHHHhccccccc-----------CHH-HHHHHHHHHHHHHHHhCCCCC-CceEEEcCCcHHHHHHH
Confidence 56788998899999999987664311 111 123344567899999998621 11224445568899999
Q ss_pred HHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC
Q 014724 185 YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR 264 (419)
Q Consensus 185 ~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~ 264 (419)
+.++++ |+|++++++|.++ ... ..+...|.. ++.++.+ +++.+|+++|++.+++.++++|++++++||+
T Consensus 69 ~~~~~~--d~vl~~~~~~~~~-~~~-----~~~~~~g~~--~~~v~~~-~~~~~d~~~l~~~l~~~~~~~v~~~~~~npt 137 (353)
T 2yrr_A 69 LANLDR--GPVLVLVNGAFSQ-RVA-----EMAALHGLD--PEVLDFP-PGEPVDPEAVARALKRRRYRMVALVHGETST 137 (353)
T ss_dssp HHTCSC--CCEEEEECSHHHH-HHH-----HHHHHTTCC--EEEEECC-TTSCCCHHHHHHHHHHSCCSEEEEESEETTT
T ss_pred HHHhcC--CcEEEEcCCCchH-HHH-----HHHHHcCCc--eEEEeCC-CCCCCCHHHHHHHHHhCCCCEEEEEccCCCc
Confidence 999987 8999998776553 100 112334554 4444454 3578999999999975478999999888874
Q ss_pred --cCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcCCCCCe-eEEEEeCCCcchhhHHHH
Q 014724 265 --DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESA 339 (419)
Q Consensus 265 --~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~ 339 (419)
..|+++|.++|++||++||+|++|..|.. +.++. ++|++++|+||++.||.| |++++++ ++.++
T Consensus 138 G~~~~~~~i~~l~~~~~~~li~D~a~~~~~~-----~~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~------~~~~~ 206 (353)
T 2yrr_A 138 GVLNPAEAIGALAKEAGALFFLDAVTTLGML-----PFSMRAMGVDYAFTGSQKCLSAPPGLAPIAASL------EARKA 206 (353)
T ss_dssp TEECCHHHHHHHHHHHTCEEEEECTTTTTTS-----CCCHHHHTCSEEECCTTSTTCCCSSCEEEEECH------HHHHH
T ss_pred ceecCHHHHHHHHHHcCCeEEEEcCcccccc-----cccccccCceEEEecCcccccCCCceEEEEECH------HHHHH
Confidence 57899999999999999999999864422 12222 579999999999877665 9999987 55555
Q ss_pred hhh---c----------c-cCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCC-Ccc
Q 014724 340 INN---A----------V-FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGG-SDN 404 (419)
Q Consensus 340 i~~---~----------~-~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~-t~~ 404 (419)
+.. . . .....++++...++++..+++.....++++..+++.++++++.+.|++.|+++..+. ..+
T Consensus 207 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~ 286 (353)
T 2yrr_A 207 FTGKRGWYLDLARVAEHWERGGYHHTTPVLLHYALLEALDLVLEEGVAARERRAREVYAWVLEELKARGFRPYPKASPLP 286 (353)
T ss_dssp CCCCSCSTTCHHHHHHHHTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCEESCSSSBCT
T ss_pred hccCCCccccHHHHhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCCccccCccCCC
Confidence 431 0 0 011234555556666666676654334678889999999999999998899887532 246
Q ss_pred eeEEEEeC
Q 014724 405 HLVLVDLR 412 (419)
Q Consensus 405 hlv~vd~~ 412 (419)
+++++++.
T Consensus 287 ~~~~~~~~ 294 (353)
T 2yrr_A 287 TVLVVRPP 294 (353)
T ss_dssp TEEEEECC
T ss_pred eEEEEECC
Confidence 67778773
No 25
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.91 E-value=4.9e-23 Score=205.10 Aligned_cols=303 Identities=12% Similarity=0.106 Sum_probs=203.8
Q ss_pred ccccccChhHHHHHHHHHHHhhhcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 014724 81 YSLGEADPEVCEIITKEKERQFKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRAL 158 (419)
Q Consensus 81 ~~l~~~~~~~~~~~~~e~~r~~~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la 158 (419)
+++..+++.++..+..... ..+.|+|..+.+. .++.|++++.+.+.+. ..+|+.. .| ..++++.+.+++.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~-~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~---~g---~~~l~~~la~~l~ 81 (386)
T 1u08_A 10 SKLPQLGTTIFTQMSALAQ-QHQAINLSQGFPDFDGPRYLQERLAHHVAQG-ANQYAPM---TG---VQALREAIAQKTE 81 (386)
T ss_dssp CSCCCCCCCHHHHHHHHHH-HTTCEECCCSSCSSCCCHHHHHHHHHHHHTT-CCSCCCT---TC---CHHHHHHHHHHHH
T ss_pred hhhhcCCccHHHHHHHHHh-cCCeEEecCCCCCCCCCHHHHHHHHHHHHhh-ccCCCCC---CC---CHHHHHHHHHHHH
Confidence 4455566666665544322 3456888877642 5799999998887542 1234321 12 2367777778888
Q ss_pred HHcCCCCC-CCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCC
Q 014724 159 AAFNLDEN-KWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGL 237 (419)
Q Consensus 159 ~~~g~~~~-~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~ 237 (419)
+.+|.+.+ ++.+ +++++|++|+..++.++++|||+|++.+|.|.++.. .+...|. +++.++++++++.
T Consensus 82 ~~~g~~~~~~~~v-~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~--~~~~v~~~~~~~~ 150 (386)
T 1u08_A 82 RLYGYQPDADSDI-TVTAGATEALYAAITALVRNGDEVICFDPSYDSYAP--------AIALSGG--IVKRMALQPPHFR 150 (386)
T ss_dssp HHHSCCCCTTTTE-EEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTC--EEEEEECCTTTCC
T ss_pred HHhCCCCCCCCCE-EEcCChHHHHHHHHHHhCCCCCEEEEeCCCchhHHH--------HHHHcCC--EEEEeecCcccCc
Confidence 77886421 2012 445556789999999999999999999998876532 2234555 4455555544578
Q ss_pred CCHHHHHHHhhhcCCeEEEEcCCCCCC--cC---ChHHHHHHHHHhCCEEEEeccccccccccCCcCCC---CC---CCc
Q 014724 238 VDYDMLEKTAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADP---FK---YCD 306 (419)
Q Consensus 238 iD~d~Le~~l~~~~pklIi~~~s~~p~--~~---dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~---~~---~~D 306 (419)
+|+++|++.+. .++++|++++++||+ .. ++++|+++|++||++||+|++|. ++.+.+....+ ++ +.|
T Consensus 151 ~d~~~l~~~l~-~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~~~~~ 228 (386)
T 1u08_A 151 VDWQEFAALLS-ERTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYE-HINFSQQGHASVLAHPQLRERA 228 (386)
T ss_dssp CCHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTT-TCBCCSSCCCCGGGSHHHHTTE
T ss_pred CCHHHHHHhhc-ccCEEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEcccc-ccccCCCCCcChhcccCccCcE
Confidence 99999999986 478999998888874 33 46899999999999999999975 33333321111 21 568
Q ss_pred EEEeCCCCcC--CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHH
Q 014724 307 VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCR 384 (419)
Q Consensus 307 iv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~ 384 (419)
++++|+||+| +|.|.|++++++ ++.+.+.........+. +....+++..+++.. ...+++..+++.++++
T Consensus 229 i~~~s~sK~~~~~G~r~G~~~~~~------~~~~~l~~~~~~~~~~~-~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~ 300 (386)
T 1u08_A 229 VAVSSFGKTYHMTGWKVGYCVAPA------PISAEIRKVHQYLTFSV-NTPAQLALADMLRAE-PEHYLALPDFYRQKRD 300 (386)
T ss_dssp EEEEEHHHHTTCGGGCCEEEECCH------HHHHHHHHHHHHHTSSC-CHHHHHHHHHHHHHC-THHHHTHHHHHHHHHH
T ss_pred EEEecchhhcCCcccceEEEEcCH------HHHHHHHHHHHhhccCC-ChHHHHHHHHHHhCC-cHHHHHHHHHHHHHHH
Confidence 9999999998 467889999886 56666544321111122 222344445566654 3456778888999999
Q ss_pred HHHHHHHhCCcEEecCCCcceeEEEEeCC
Q 014724 385 ALASRLVELGYKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 385 ~l~~~L~~~G~~v~~~~t~~hlv~vd~~~ 413 (419)
++.+.|++.|+++... ...+++|+++..
T Consensus 301 ~l~~~L~~~g~~~~~~-~~g~~~~~~~~~ 328 (386)
T 1u08_A 301 ILVNALNESRLEILPC-EGTYFLLVDYSA 328 (386)
T ss_dssp HHHHHTTSSSCEECCC-CBSSEEEEECTT
T ss_pred HHHHHHHHCCCeecCC-CceEEEEEecCC
Confidence 9999999989987653 345789999864
No 26
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.91 E-value=7e-23 Score=204.17 Aligned_cols=283 Identities=16% Similarity=0.119 Sum_probs=193.5
Q ss_pred cccccccC-CCChHHHHHHHhhhhhccCCCCCCCC-CCCCchhHHHHHHHHHHHHHHHHcCC-CCCCCceeEecCChHHH
Q 014724 104 SLELIASE-NFTSRAVMEAVGSCLTNKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNL-DENKWGVNVQPLSGSPA 180 (419)
Q Consensus 104 ~i~L~~se-n~~~~~V~eal~~~l~~~y~~g~p~~-r~~~g~~~~~~lE~~~~~~la~~~g~-~~~~~~v~V~~~sGt~A 180 (419)
.+.|..+. ...|+.|++++.+.+.+.+ +.+.. .+..+... ......+++++++++|. +++ ..+++++|++|
T Consensus 24 ~i~l~~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~l~~~la~~~~~~~~~---~v~~~~g~t~a 97 (406)
T 1kmj_A 24 LAYLDSAASAQKPSQVIDAEAEFYRHGY--AAVHRGIHTLSAQA-TEKMENVRKRASLFINARSAE---ELVFVRGTTEG 97 (406)
T ss_dssp CEECCTTTCCCCCHHHHHHHHHHHHHTC--CCCSSCSSHHHHHH-HHHHHHHHHHHHHHTTCSCGG---GEEEESSHHHH
T ss_pred eEEecCCccCCCCHHHHHHHHHHHHhhc--CCCCCCcchHHHHH-HHHHHHHHHHHHHHcCCCCCC---eEEEeCChhHH
Confidence 45665544 3578999999998886532 22221 01111111 22333466889999998 443 22445566789
Q ss_pred HHHHHHHc----cCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEE
Q 014724 181 NFEVYTAI----LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLII 256 (419)
Q Consensus 181 ~~~~~~al----l~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi 256 (419)
+..++.++ ++|||+|+++++.|.+.+.. +. ..+...|. +++.++.+ +++.+|+++|++.+.+ ++++|+
T Consensus 98 ~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~-~~---~~~~~~g~--~~~~~~~~-~~~~~d~~~l~~~l~~-~~~~v~ 169 (406)
T 1kmj_A 98 INLVANSWGNSNVRAGDNIIISQMEHHANIVP-WQ---MLCARVGA--ELRVIPLN-PDGTLQLETLPTLFDE-KTRLLA 169 (406)
T ss_dssp HHHHHHHTHHHHCCTTCEEEEETTCCGGGTHH-HH---HHHHHHTC--EEEEECBC-TTSCBCGGGHHHHCCT-TEEEEE
T ss_pred HHHHHHHhhhhcCCCCCEEEEecccchHHHHH-HH---HHHHhCCC--EEEEEecC-CCCCcCHHHHHHHhcc-CCeEEE
Confidence 99999999 89999999999988775421 10 01123354 44555555 3578999999999975 789999
Q ss_pred EcCCCCC--CcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcCCCCCe-eEEEEeCCCc
Q 014724 257 AGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPV 331 (419)
Q Consensus 257 ~~~s~~p--~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l~Gprg-G~i~~~~~~~ 331 (419)
+++++|| ...|+++|.++|++||++||+|++|..|.. +..+. +.|++++|+||+| ||.| |++++++
T Consensus 170 ~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~g~~-----~~~~~~~~~d~~~~s~~K~~-g~~G~G~~~~~~--- 240 (406)
T 1kmj_A 170 ITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHH-----PVDVQALDCDFYVFSGHKLY-GPTGIGILYVKE--- 240 (406)
T ss_dssp EESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTS-----CCCHHHHTCSEEEEEGGGTT-SCTTCEEEEECH---
T ss_pred EeCCCccccCcCCHHHHHHHHHHcCCEEEEEchhhcCCC-----CCcccccCCCEEEEEchhcc-CCCCcEEEEEeH---
Confidence 9888876 467899999999999999999999876532 11122 6899999999988 7776 9999986
Q ss_pred chhhHHHHhhhcccC---------------------CCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHH
Q 014724 332 LGVELESAINNAVFP---------------------GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRL 390 (419)
Q Consensus 332 ~~~~l~~~i~~~~~~---------------------~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L 390 (419)
++.+.+...... ...+++....++++..+++.+...++++..+++.++++++.+.|
T Consensus 241 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L 317 (406)
T 1kmj_A 241 ---ALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQL 317 (406)
T ss_dssp ---HHHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred ---HHHhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH
Confidence 676666533211 11245556666666556666543346778888899999999999
Q ss_pred HhC-CcEEecCCCcceeEEEEeC
Q 014724 391 VEL-GYKLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 391 ~~~-G~~v~~~~t~~hlv~vd~~ 412 (419)
++. |+++..+....+++++++.
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~ 340 (406)
T 1kmj_A 318 ESVPDLTLYGPQNRLGVIAFNLG 340 (406)
T ss_dssp TTSTTEEEESCTTCCSEEEEEET
T ss_pred hcCCCeEEecCCCcCCEEEEEEC
Confidence 987 8888753214566777764
No 27
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.91 E-value=2.8e-23 Score=206.57 Aligned_cols=275 Identities=15% Similarity=0.136 Sum_probs=190.0
Q ss_pred hcccccccCC---CChHHHHHHHhhhhhccCCCCCCCCCCCCc-hhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChH
Q 014724 103 KSLELIASEN---FTSRAVMEAVGSCLTNKYSEGLPGKRYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS 178 (419)
Q Consensus 103 ~~i~L~~sen---~~~~~V~eal~~~l~~~y~~g~p~~r~~~g-~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt 178 (419)
..|++..+++ +.++.+++++.+.+.+ +..+++..+|..| .+...+ +++.+++++|++. .+++++|+
T Consensus 40 ~~id~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~g~~~~~~~----l~~~la~~~g~~~-----~i~~~sGt 109 (384)
T 1bs0_A 40 QYLNFSSNDYLGLSHHPQIIRAWQQGAEQ-FGIGSGGSGHVSGYSVVHQA----LEEELAEWLGYSR-----ALLFISGF 109 (384)
T ss_dssp EEEECSCCCTTSGGGCHHHHHHHHHHHHH-HCSCCCSBTTTTCCCHHHHH----HHHHHHHHHTCSE-----EEEESCHH
T ss_pred eEEEeeccCccCCCCCHHHHHHHHHHHHH-hCCCCCCcCcccCChHHHHH----HHHHHHHHhCCCc-----EEEeCCcH
Confidence 4577777664 3689999999888754 2223333333222 222233 4577888889853 47889999
Q ss_pred HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhc--CCeEEE
Q 014724 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF--RPKLII 256 (419)
Q Consensus 179 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~--~pklIi 256 (419)
+|+..++.++++|||.|++.++.|+++.. .+...|. +++.++ .+|+++|++.+++. ++++|+
T Consensus 110 ~a~~~~~~~~~~~gd~v~~~~~~~~~~~~--------~~~~~g~--~~~~~~------~~d~~~l~~~l~~~~~~~~~v~ 173 (384)
T 1bs0_A 110 AANQAVIAAMMAKEDRIAADRLSHASLLE--------AASLSPS--QLRRFA------HNDVTHLARLLASPCPGQQMVV 173 (384)
T ss_dssp HHHHHHHHHHCCTTCEEEEETTCCHHHHH--------HHHTSSS--EEEEEC------TTCHHHHHHHHHSCCSSCEEEE
T ss_pred HHHHHHHHHhCCCCcEEEEcccccHHHHH--------HHHHcCC--CEEEeC------CCCHHHHHHHHHhcCCCCeEEE
Confidence 99999999999999999999998876531 2334554 444443 25899999998754 267888
Q ss_pred EcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccc-cCC-cCCCCC-CCcEEEeCCCCcCCCCCeeEEEEeCCCc
Q 014724 257 AGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVA-ASV-VADPFK-YCDVVTTTTHKSLRGPRGGMIFFKKDPV 331 (419)
Q Consensus 257 ~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~-~g~-~~~~~~-~~Div~~S~hK~l~GprgG~i~~~~~~~ 331 (419)
+++++||+ ..|+++|.++|++||++||+|++|..|... .+. ....++ +.|++++|+||++ ||.||++++++
T Consensus 174 ~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~-~~~GG~~~~~~--- 249 (384)
T 1bs0_A 174 TEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGF-GVSGAAVLCSS--- 249 (384)
T ss_dssp EESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTCCCSEEEEESSSTT-SSCCEEEEECH---
T ss_pred EeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCcccceecCCCCchHHhcCCCCcEEEeeccchh-hccCcEEEeCH---
Confidence 88888874 678999999999999999999998766432 111 011122 5789999999998 48889999986
Q ss_pred chhhHHHHhhhcccCCC-CCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeEEEE
Q 014724 332 LGVELESAINNAVFPGL-QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVD 410 (419)
Q Consensus 332 ~~~~l~~~i~~~~~~~~-~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~vd 410 (419)
++.+.+.....+.. .++++....+++..+++.....+.++..+++.++++++.+.|++.|+++.+ ...+++|++
T Consensus 250 ---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~--~~~~~~~~~ 324 (384)
T 1bs0_A 250 ---TVADYLLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLPFTLAD--SCSAIQPLI 324 (384)
T ss_dssp ---HHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTSSCEECS--CCSSBCCEE
T ss_pred ---HHHHHHHHhchhhhcCCCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhcCCcccC--CCCCEEEEE
Confidence 56666544211111 113344444444556666542245678888999999999999999998764 356777887
Q ss_pred eC
Q 014724 411 LR 412 (419)
Q Consensus 411 ~~ 412 (419)
+.
T Consensus 325 ~~ 326 (384)
T 1bs0_A 325 VG 326 (384)
T ss_dssp EE
T ss_pred eC
Confidence 74
No 28
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.91 E-value=5e-23 Score=204.89 Aligned_cols=269 Identities=14% Similarity=0.090 Sum_probs=186.6
Q ss_pred ccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHc
Q 014724 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI 188 (419)
Q Consensus 109 ~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~al 188 (419)
++...+++.|++++.+.+.+.+ +... ....+.+++++++++|++++ ..+++++|++|+..++.++
T Consensus 15 ~~~~~~~~~v~~a~~~~~~~~~-----------~~~~-~~~~~~l~~~la~~~g~~~~---~v~~t~g~t~a~~~~~~~~ 79 (392)
T 2z9v_A 15 AGPVNAYPEVLRGLGRTVLYDY-----------DPAF-QLLYEKVVDKAQKAMRLSNK---PVILHGEPVLGLEAAAASL 79 (392)
T ss_dssp SSCCCCCHHHHHHTTSCCCCTT-----------SHHH-HHHHHHHHHHHHHHTTCSSC---CEEESSCTHHHHHHHHHHH
T ss_pred CCCcCCCHHHHHHHhccccccc-----------cHHH-HHHHHHHHHHHHHHhCCCCC---EEEEeCCchHHHHHHHHHh
Confidence 4556689999999987664311 1111 12233466889999999753 2245566789999999999
Q ss_pred cCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhh-cCCeEEEEcCCCCCC--c
Q 014724 189 LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL-FRPKLIIAGASAYPR--D 265 (419)
Q Consensus 189 l~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~-~~pklIi~~~s~~p~--~ 265 (419)
++|||+|++++++|.++. .. ..+...|.. ++.+++++ ++.+|+++|++.+++ .++++|++++++||+ .
T Consensus 80 ~~~gd~Vl~~~~~~~~~~--~~----~~~~~~g~~--~~~v~~~~-~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~ 150 (392)
T 2z9v_A 80 ISPDDVVLNLASGVYGKG--FG----YWAKRYSPH--LLEIEVPY-NEAIDPQAVADMLKAHPEITVVSVCHHDTPSGTI 150 (392)
T ss_dssp CCTTCCEEEEESSHHHHH--HH----HHHHHHCSC--EEEEECCT-TSCCCHHHHHHHHHHCTTCCEEEEESEEGGGTEE
T ss_pred cCCCCEEEEecCCcccHH--HH----HHHHHcCCc--eEEeeCCC-CCCCCHHHHHHHHhcCCCCcEEEEeccCCCCcee
Confidence 999999999998775541 10 011223543 44444543 567999999999964 378999998888764 6
Q ss_pred CChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcCCCCCe-eEEEEeCCCcchhhHHHHhhh
Q 014724 266 FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINN 342 (419)
Q Consensus 266 ~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~~ 342 (419)
.|+++|.++|++||++||+|++|..|.. +.++. ++|++++|+||++.||.| |++++++ ++.+++..
T Consensus 151 ~~l~~i~~l~~~~~~~li~D~a~~~g~~-----~~~~~~~~~d~~~~s~sK~~~~~~g~G~l~~~~------~~~~~l~~ 219 (392)
T 2z9v_A 151 NPIDAIGALVSAHGAYLIVDAVSSFGGM-----KTHPEDCKADIYVTGPNKCLGAPPGLTMMGVSE------RAWAKMKA 219 (392)
T ss_dssp CCHHHHHHHHHHTTCEEEEECTTTBTTB-----SCCGGGGTCSEEEECSSSTTCCCSCCEEEEECH------HHHHHHHT
T ss_pred ccHHHHHHHHHHcCCeEEEEcccccCCc-----ccccccccceEEEecCcccccCCCceeEEEECH------HHHHHhhh
Confidence 7899999999999999999999875532 11222 579999999999877766 9999887 56555532
Q ss_pred cc-------------------cCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEec-CC-
Q 014724 343 AV-------------------FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS-GG- 401 (419)
Q Consensus 343 ~~-------------------~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~-~~- 401 (419)
.. .....++++...++++..+++.....++++..+++.++++++.+.|++.|+++.. ..
T Consensus 220 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 299 (392)
T 2z9v_A 220 NPLAPRASMLSIVDWENAWSRDKPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHALTAKAMRAGVTAMGLSVWAASDS 299 (392)
T ss_dssp CTTSCCSSTTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSSSGG
T ss_pred ccCCCCceeccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHcCCeeccCCcc
Confidence 10 0112345555556666666766543336778889999999999999988888764 21
Q ss_pred -CcceeEEEEeC
Q 014724 402 -SDNHLVLVDLR 412 (419)
Q Consensus 402 -t~~hlv~vd~~ 412 (419)
...+++++.+.
T Consensus 300 ~~~~~~~~~~~~ 311 (392)
T 2z9v_A 300 IASPTTTAVRTP 311 (392)
T ss_dssp GBCTTEEEEECC
T ss_pred ccCCceEEEECC
Confidence 14677888773
No 29
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.91 E-value=3.4e-23 Score=206.32 Aligned_cols=303 Identities=12% Similarity=0.055 Sum_probs=201.3
Q ss_pred hccccccChhHHHHHHHHHHHhhhcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q 014724 80 DYSLGEADPEVCEIITKEKERQFKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRA 157 (419)
Q Consensus 80 ~~~l~~~~~~~~~~~~~e~~r~~~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~l 157 (419)
++++..+++..+..+.+...+..+.|+|..+++. .++.|++++.+.+.... .+|+.. .| ..++++.+.+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~~~---~g---~~~l~~~la~~~ 76 (389)
T 1gd9_A 4 SDRLELVSASEIRKLFDIAAGMKDVISLGIGEPDFDTPQHIKEYAKEALDKGL-THYGPN---IG---LLELREAIAEKL 76 (389)
T ss_dssp HHHHHHSCCCHHHHHHHHHHTCSSCEECCCCSCSSCCCHHHHHHHHHHHHTTC-CSCCCT---TC---CHHHHHHHHHHH
T ss_pred hhHhHhCChhHHHHHHHHHhhhcCeEecCCCCCCCCCCHHHHHHHHHHHhCCC-CCCCCC---CC---cHHHHHHHHHHH
Confidence 3455566666544444433323467888877753 57999999988875422 234321 12 236776777777
Q ss_pred HHHcCCC--CCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCC-C
Q 014724 158 LAAFNLD--ENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-S 234 (419)
Q Consensus 158 a~~~g~~--~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~-~ 234 (419)
.+.+|.+ +++ ..+++++|++|+..++.++++|||+|++.+|.|.++.. .+...|. +++.++.++ +
T Consensus 77 ~~~~g~~~~~~~--~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~--~~~~v~~~~~~ 144 (389)
T 1gd9_A 77 KKQNGIEADPKT--EIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAP--------AVILAGG--KPVEVPTYEED 144 (389)
T ss_dssp HHHHCCCCCTTT--SEEEESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHH--------HHHHHTC--EEEEEECCGGG
T ss_pred HHHhCCCCCCCC--eEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHCCC--EEEEeccCCcc
Confidence 7777853 321 02455667899999999999999999999998877531 2234455 444444443 2
Q ss_pred CCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cC---ChHHHHHHHHHhCCEEEEeccccccccccCC-cCC--CCC---
Q 014724 235 TGLVDYDMLEKTAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASV-VAD--PFK--- 303 (419)
Q Consensus 235 ~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~---dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~-~~~--~~~--- 303 (419)
++.+|+++|++.+++ ++++|++++++||+ .. ++++|+++|++||++||+|++|..+ ...+. ..+ .++
T Consensus 145 ~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~-~~~~~~~~~~~~~~~~~ 222 (389)
T 1gd9_A 145 EFRLNVDELKKYVTD-KTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHF-IYDDARHYSIASLDGMF 222 (389)
T ss_dssp TTCCCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTC-BCTTCCCCCGGGSTTCG
T ss_pred CCCCCHHHHHHhcCc-CceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhc-ccCCCCCCCHhhccCCC
Confidence 467999999999975 78999888888874 33 5899999999999999999997644 33222 111 111
Q ss_pred CCcEEEeCCCCcC--CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcCh--HHHHHHHHH
Q 014724 304 YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSP--EFKVYQNKV 379 (419)
Q Consensus 304 ~~Div~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~--~~~~~~~~v 379 (419)
+.|++++|+||+| +|.|.|++++++ ++.+.+......... +++....+++..+++... . .+++..+++
T Consensus 223 ~~~i~~~s~sK~~~~~G~r~G~~~~~~------~~~~~l~~~~~~~~~-~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~ 294 (389)
T 1gd9_A 223 ERTITVNGFSKTFAMTGWRLGFVAAPS------WIIERMVKFQMYNAT-CPVTFIQYAAAKALKDER-SWKAVEEMRKEY 294 (389)
T ss_dssp GGEEEEEESTTTTTCGGGCCEEEECCH------HHHHHHHHHHTTTTC-SCCHHHHHHHHHHHTCHH-HHHHHHHHHHHH
T ss_pred CCEEEEecChhhcCCcccceEEEEECH------HHHHHHHHHHhhhcc-CCCHHHHHHHHHHHhCCC-cchHHHHHHHHH
Confidence 4579999999998 567789999986 677766554333222 233333333344454321 2 356777888
Q ss_pred HHHHHHHHHHHHhCCcEEecCCCcceeEEEEeC
Q 014724 380 VSNCRALASRLVELGYKLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 380 ~~n~~~l~~~L~~~G~~v~~~~t~~hlv~vd~~ 412 (419)
.++++++.+.|++.|+++..+ ..+.++|+++.
T Consensus 295 ~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~~~~ 326 (389)
T 1gd9_A 295 DRRRKLVWKRLNEMGLPTVKP-KGAFYIFPRIR 326 (389)
T ss_dssp HHHHHHHHHHHHHTTCCCCCC-CBTTEECCBCG
T ss_pred HHHHHHHHHHHHHcCCeecCC-CeeeEEEEecc
Confidence 999999999999989887642 33556787875
No 30
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.91 E-value=5.6e-23 Score=205.68 Aligned_cols=284 Identities=13% Similarity=0.054 Sum_probs=192.1
Q ss_pred cccccccC-CCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHH
Q 014724 104 SLELIASE-NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF 182 (419)
Q Consensus 104 ~i~L~~se-n~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~ 182 (419)
.+.|..+. ..+++.|++++.+.+.+.+ +++...|..|... ....+.+++++++++|++++ ..+++++|++++.
T Consensus 27 ~~~ld~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~l~~~la~~~g~~~~---~v~~~~g~t~al~ 100 (406)
T 3cai_A 27 WVHFDAPAGMLIPDSVATTVSTAFRRSG--ASTVGAHPSARRS-AAVLDAAREAVADLVNADPG---GVVLGADRAVLLS 100 (406)
T ss_dssp CEECBGGGCCCCCHHHHHHHHHHHHHCC--SSSCSSSHHHHHH-HHHHHHHHHHHHHHHTCCGG---GEEEESCHHHHHH
T ss_pred eEEEeCCCcCCCCHHHHHHHHHHHHhcC--CCCCCccHHHHHH-HHHHHHHHHHHHHHhCCCCC---eEEEeCChHHHHH
Confidence 35555444 3578999999998886433 2333233222111 22333567889999999753 1244445578999
Q ss_pred HHHHHc---cCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcC
Q 014724 183 EVYTAI---LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 259 (419)
Q Consensus 183 ~~~~al---l~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~ 259 (419)
+++.++ +++||+|++++++|.++..... ......|. +++.++++++++.+|+++|++.+++ ++++|++++
T Consensus 101 ~~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~----~~~~~~g~--~v~~v~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~ 173 (406)
T 3cai_A 101 LLAEASSSRAGLGYEVIVSRLDDEANIAPWL----RAAHRYGA--KVKWAEVDIETGELPTWQWESLISK-STRLVAVNS 173 (406)
T ss_dssp HHHHHTGGGGBTTCEEEEETTSCGGGTHHHH----HHHHHHBC--EEEEECCCTTTCCCCGGGHHHHCCT-TEEEEEEES
T ss_pred HHHHHHhhccCCCCEEEEcCCccHHHHHHHH----HHHHhcCC--eEEEEecCcccCCcCHHHHHHHhCC-CceEEEEeC
Confidence 888888 7999999999998876542110 00011344 5555556545688999999999974 789999998
Q ss_pred CCCC--CcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcCCCCCee-EEEEeCCCcchh
Q 014724 260 SAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRGG-MIFFKKDPVLGV 334 (419)
Q Consensus 260 s~~p--~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l~GprgG-~i~~~~~~~~~~ 334 (419)
++|| ...|+++|.++|+++|++||+|++|..|.. +.++. ++|++++|+||++ ||++| ++++++
T Consensus 174 ~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~-----~~~~~~~~~d~~~~s~~K~~-g~~~G~~~~~~~------ 241 (406)
T 3cai_A 174 ASGTLGGVTDLRAMTKLVHDVGALVVVDHSAAAPYR-----LLDIRETDADVVTVNAHAWG-GPPIGAMVFRDP------ 241 (406)
T ss_dssp BCTTTCBBCCCHHHHHHHHHTTCEEEEECTTTTTTC-----CCCHHHHCCSEEEEEGGGGT-SCSCEEEEESCH------
T ss_pred CcCCccccCCHHHHHHHHHHcCCEEEEEcccccCCC-----CCCchhcCCCEEEeehhhhc-CCCcCeEEEEeh------
Confidence 8877 467899999999999999999999876532 11122 6899999999976 67788 998887
Q ss_pred hHHHHhhhccc--C------CCCCCChHHHHHHHHHHHHHhcCh--------------HHHHHHHHHHHHHHHHHHHHHh
Q 014724 335 ELESAINNAVF--P------GLQGGPHNHTIGGLAVCLKHAQSP--------------EFKVYQNKVVSNCRALASRLVE 392 (419)
Q Consensus 335 ~l~~~i~~~~~--~------~~~g~p~~~~iaala~al~~~~~~--------------~~~~~~~~v~~n~~~l~~~L~~ 392 (419)
++.+++..... . ...++++...++++..+++..... .+++..+++.++++++.+.|++
T Consensus 242 ~~~~~l~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 321 (406)
T 3cai_A 242 SVMNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDYLMVSLRS 321 (406)
T ss_dssp HHHHTSCCCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHhhcCCcccCCCCCccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHhc
Confidence 66666644321 0 113455666666666667655431 3577888889999999999998
Q ss_pred C-CcEEecCC-CcceeEEEEeC
Q 014724 393 L-GYKLVSGG-SDNHLVLVDLR 412 (419)
Q Consensus 393 ~-G~~v~~~~-t~~hlv~vd~~ 412 (419)
. |+++.... ....++++.+.
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~ 343 (406)
T 3cai_A 322 LPLVMLIGRPEAQIPVVSFAVH 343 (406)
T ss_dssp CTTEEECCCCSSBCSEEEEEET
T ss_pred CCCeEEcCCccccCCEEEEEEC
Confidence 6 88876431 22346777664
No 31
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.91 E-value=3.9e-23 Score=205.98 Aligned_cols=274 Identities=12% Similarity=0.070 Sum_probs=188.3
Q ss_pred cccccccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeE-ecCChHHHHH
Q 014724 104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNV-QPLSGSPANF 182 (419)
Q Consensus 104 ~i~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V-~~~sGt~A~~ 182 (419)
.+.+.+++..+++.|++++.+.+.+.|. ...+.....+++++++++|.+++. +| ++++|++|+.
T Consensus 19 ~~~~~~~p~~~~~~v~~a~~~~~~~~~~------------~~~~~~~~~l~~~la~~~~~~~~~---~v~~~~g~t~al~ 83 (396)
T 2ch1_A 19 KIMMGPGPSNCSKRVLTAMTNTVLSNFH------------AELFRTMDEVKDGLRYIFQTENRA---TMCVSGSAHAGME 83 (396)
T ss_dssp CBCCSSSSCCCCHHHHHHTTSCCCCTTC------------HHHHHHHHHHHHHHHHHHTCCCSC---EEEESSCHHHHHH
T ss_pred ceeecCCCCCCCHHHHHHhccccccCCC------------hhHHHHHHHHHHHHHHHhCCCCCc---EEEECCcHHHHHH
Confidence 3556666667899999998775532220 111222334568899999987631 34 4455788999
Q ss_pred HHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC
Q 014724 183 EVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 262 (419)
Q Consensus 183 ~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~ 262 (419)
.++.++++|||+|+++++.|.++... ..+...|. +++.++.+ .++.+|+++|++.+++.++++|++++++|
T Consensus 84 ~~~~~~~~~gd~vl~~~~~~~~~~~~------~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~l~~~~~~~v~~~~~~n 154 (396)
T 2ch1_A 84 AMLSNLLEEGDRVLIAVNGIWAERAV------EMSERYGA--DVRTIEGP-PDRPFSLETLARAIELHQPKCLFLTHGDS 154 (396)
T ss_dssp HHHHHHCCTTCEEEEEESSHHHHHHH------HHHHHTTC--EEEEEECC-TTSCCCHHHHHHHHHHHCCSEEEEESEET
T ss_pred HHHHHhcCCCCeEEEEcCCcccHHHH------HHHHHcCC--ceEEecCC-CCCCCCHHHHHHHHHhCCCCEEEEECCCC
Confidence 99999999999999999987664200 01234455 44444454 36789999999999755789999988887
Q ss_pred CC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcCCCCCe-eEEEEeCCCcchhhHH
Q 014724 263 PR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELE 337 (419)
Q Consensus 263 p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~ 337 (419)
|+ ..|+++|.++|+++|++||+|++|..|.. +.++. ++|++++|+||++.|+.| |+++.++ ++.
T Consensus 155 ptG~~~~~~~i~~l~~~~~~~li~Dea~~~g~~-----~~~~~~~~~d~~~~s~~K~~~~~~g~g~~~~~~------~~~ 223 (396)
T 2ch1_A 155 SSGLLQPLEGVGQICHQHDCLLIVDAVASLCGV-----PFYMDKWEIDAVYTGAQKVLGAPPGITPISISP------KAL 223 (396)
T ss_dssp TTTEECCCTTHHHHHHHTTCEEEEECTTTBTTB-----CCCTTTTTCCEEECCCC-CCCCCSSCEEEEECH------HHH
T ss_pred CCceecCHHHHHHHHHHcCCEEEEEccccccCC-----ccchhhcCcCEEEEcCCccccCCCCeEEEEECH------HHH
Confidence 74 56899999999999999999999875522 22233 579999999999877655 8988877 455
Q ss_pred HHhhhc-------c---------c------CCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCc
Q 014724 338 SAINNA-------V---------F------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGY 395 (419)
Q Consensus 338 ~~i~~~-------~---------~------~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~ 395 (419)
+.+... . + ....++++...++++..+++.....++++..+++.++++++.+.|++.|+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 303 (396)
T 2ch1_A 224 DVIRNRRTKSKVFYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGKMGL 303 (396)
T ss_dssp HHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HhhhhccCcccceEechHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 544221 0 0 11224455555556666776654345678888999999999999998898
Q ss_pred EEecCCC---cceeEEEEeC
Q 014724 396 KLVSGGS---DNHLVLVDLR 412 (419)
Q Consensus 396 ~v~~~~t---~~hlv~vd~~ 412 (419)
+++.... ..+++++++.
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~ 323 (396)
T 2ch1_A 304 DIFVKDPRHRLPTVTGIMIP 323 (396)
T ss_dssp CBSSCSGGGBCTTEEEEECC
T ss_pred eeccCCccccCCceEEEEcC
Confidence 8775321 1236777763
No 32
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.91 E-value=4.9e-23 Score=205.53 Aligned_cols=304 Identities=17% Similarity=0.101 Sum_probs=197.5
Q ss_pred hccccccChhHHHHHHHHHHH----hhhcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHH
Q 014724 80 DYSLGEADPEVCEIITKEKER----QFKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLC 153 (419)
Q Consensus 80 ~~~l~~~~~~~~~~~~~e~~r----~~~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~ 153 (419)
+.++..+.+..+.-+.....+ ..+.|+|..+++. +++.+++++.+.+.... .+|+.. .|. .++++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~~~---~g~---~~lr~~i 77 (385)
T 1b5p_A 5 SRRVQAMKPSATVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQGK-TKYAPP---AGI---PELREAL 77 (385)
T ss_dssp CHHHHHCCCCHHHHHHHHHHHHHHTTCCCEECCCSSCSSCCCHHHHHHHHHHHHTTC-CSCCCT---TCC---HHHHHHH
T ss_pred hhHHhhcCcchHHHHHHHHHHHHhcCCCEEEecCCCCCCCCCHHHHHHHHHHHhcCC-CCCCCC---CCC---HHHHHHH
Confidence 344555555543323222221 1356788777753 57899999888775432 234321 122 3666677
Q ss_pred HHHHHHHcCCCCCCCceeEecCC-hHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccC
Q 014724 154 QKRALAAFNLDENKWGVNVQPLS-GSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD 232 (419)
Q Consensus 154 ~~~la~~~g~~~~~~~v~V~~~s-Gt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~ 232 (419)
.+++.+.+|++.+ . .+|++++ |++|+..++.++++|||+|++++|.|.++.. .+...|. +++.++++
T Consensus 78 a~~~~~~~g~~~~-~-~~i~~t~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~g~--~~~~v~~~ 145 (385)
T 1b5p_A 78 AEKFRRENGLSVT-P-EETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPE--------MVRFAGG--VVVEVETL 145 (385)
T ss_dssp HHHHHHTTCCCCC-G-GGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHH--------HHHHTTC--EEEEEECC
T ss_pred HHHHHHHhCCCCC-h-HHEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCchhHHH--------HHHHcCC--EEEEeecC
Confidence 7777777776431 1 1355555 5789999999999999999999998866531 2234565 44555554
Q ss_pred C-CCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--c---CChHHHHHHHHHhCCEEEEeccccccccccCCcCCC--CC-
Q 014724 233 E-STGLVDYDMLEKTAILFRPKLIIAGASAYPR--D---FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADP--FK- 303 (419)
Q Consensus 233 ~-~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~---~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~--~~- 303 (419)
+ +++.+|+++|++.+++ ++|+|++++|+||+ . .++++|.++|++||++||+|++|. .+.+.+...+. ++
T Consensus 146 ~~~~~~~d~~~l~~~l~~-~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~ 223 (385)
T 1b5p_A 146 PEEGFVPDPERVRRAITP-RTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYE-HLLYEGEHFSPGRVAP 223 (385)
T ss_dssp GGGTTCCCHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTT-TCBSSSCCCCGGGTCT
T ss_pred cccCCCCCHHHHHHhcCC-CCEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccch-hcccCCCCCCHHHcCC
Confidence 3 3568999999999864 68999998999985 3 348999999999999999999964 44433311111 11
Q ss_pred CCcEEEeCCCCcC--CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHH---hcChHHHHHHHH
Q 014724 304 YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKH---AQSPEFKVYQNK 378 (419)
Q Consensus 304 ~~Div~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~---~~~~~~~~~~~~ 378 (419)
..+++++|+||++ +|.|.|++++++ ++.+.+......+..+.+.. ...+...+++. .. ..+++..++
T Consensus 224 ~~~i~~~s~SK~~~~~G~RiG~~~~~~------~~~~~l~~~~~~~~~~~~~~-~~~a~~~~l~~~~~~~-~~~~~~~~~ 295 (385)
T 1b5p_A 224 EHTLTVNGAAKAFAMTGWRIGYACGPK------EVIKAMASVSRQSTTSPDTI-AQWATLEALTNQEASR-AFVEMAREA 295 (385)
T ss_dssp TTEEEEEESTTTTTCGGGCCEEEECCH------HHHHHHHHHHHTTTCSCCHH-HHHHHHHHHHCHHHHH-HHHHHHHHH
T ss_pred CCEEEEEechhhcCCcccceEEEEeCH------HHHHHHHHHHhhccCCCCHH-HHHHHHHHHhCCCcch-HHHHHHHHH
Confidence 3468899999987 578899999876 56666654333332223322 23333335532 21 345677788
Q ss_pred HHHHHHHHHHHHHhCCcEEecCCCcceeEEEEeCC
Q 014724 379 VVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 379 v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~vd~~~ 413 (419)
+.++++++.+.|++.|+++... ..+.++|++++.
T Consensus 296 ~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~~~~~ 329 (385)
T 1b5p_A 296 YRRRRDLLLEGLTALGLKAVRP-SGAFYVLMDTSP 329 (385)
T ss_dssp HHHHHHHHHHHHHHHTCCBCCC-SBTTEEEEECTT
T ss_pred HHHHHHHHHHHHHHCCCeecCC-CeeEEEEEecCC
Confidence 8899999999998888887643 345567888853
No 33
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.91 E-value=2.9e-23 Score=207.65 Aligned_cols=274 Identities=19% Similarity=0.231 Sum_probs=190.9
Q ss_pred hcccccccCCC---ChHHHHHHHhhhhhccCCCCCCCCCCCCc-hhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChH
Q 014724 103 KSLELIASENF---TSRAVMEAVGSCLTNKYSEGLPGKRYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS 178 (419)
Q Consensus 103 ~~i~L~~sen~---~~~~V~eal~~~l~~~y~~g~p~~r~~~g-~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt 178 (419)
..|++..+..+ .++.|++++.+.+.. |..++.+.+|..| .+...+ +++.+++++|++. .+++++|+
T Consensus 46 ~~id~~~~~~~g~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~g~~~~~~~----l~~~la~~~g~~~-----~i~~~sGs 115 (401)
T 1fc4_A 46 HVINFCANNYLGLANHPDLIAAAKAGMDS-HGFGMASVRFICGTQDSHKE----LEQKLAAFLGMED-----AILYSSCF 115 (401)
T ss_dssp EEEECCCSCTTSCTTCHHHHHHHHHHHHH-HCSCCCSCHHHHCCBHHHHH----HHHHHHHHHTCSE-----EEEESCHH
T ss_pred cEEEeeccCcccccCCHHHHHHHHHHHHH-hCCCCCCCCcccCCcHHHHH----HHHHHHHHhCCCc-----EEEeCChH
Confidence 34667666332 379999999888753 4334433333222 222233 4577888899872 37889999
Q ss_pred HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhc-----CCe
Q 014724 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-----RPK 253 (419)
Q Consensus 179 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~-----~pk 253 (419)
+|+..++.++++|||+|++.++.|+++.. .+...|. +++.++ .+|+++|++.+++. +++
T Consensus 116 ~a~~~~~~~~~~~gd~v~~~~~~~~~~~~--------~~~~~g~--~~~~~~------~~d~~~l~~~l~~~~~~~~~~~ 179 (401)
T 1fc4_A 116 DANGGLFETLLGAEDAIISDALNHASIID--------GVRLCKA--KRYRYA------NNDMQELEARLKEAREAGARHV 179 (401)
T ss_dssp HHHHTTHHHHCCTTCEEEEETTCCHHHHH--------HHHTSCS--EEEEEC------TTCHHHHHHHHHHHHHTTCSSE
T ss_pred HHHHHHHHHHcCCCCEEEEcchhHHHHHH--------HHHHcCC--ceEEEC------CCCHHHHHHHHHHhhccCCCce
Confidence 99999999999999999999998866531 2334554 444543 25899999988752 689
Q ss_pred EEEEcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccc-cCCc-C--CCCC-CCcEEEeCCCCcCCCCCeeEEEE
Q 014724 254 LIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVA-ASVV-A--DPFK-YCDVVTTTTHKSLRGPRGGMIFF 326 (419)
Q Consensus 254 lIi~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~-~g~~-~--~~~~-~~Div~~S~hK~l~GprgG~i~~ 326 (419)
+|++++++||+ ..++++|.++|++||++||+|++|..|+.+ .+.. + ..+. +.|++++|+||+|.|+.||++++
T Consensus 180 ~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~di~~~s~sK~~~~~~gG~~~~ 259 (401)
T 1fc4_A 180 LIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKALGGASGGYTAA 259 (401)
T ss_dssp EEEEESEETTTTEECCHHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSSSCEEEEE
T ss_pred EEEEeCCcCCCCCCCCHHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCcCCcEEEecchhhccCCCCEEEEc
Confidence 99999888874 578999999999999999999998667653 2211 1 1122 57999999999996666999999
Q ss_pred eCCCcchhhHHHHhhhcccCC-CCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcce
Q 014724 327 KKDPVLGVELESAINNAVFPG-LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNH 405 (419)
Q Consensus 327 ~~~~~~~~~l~~~i~~~~~~~-~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~h 405 (419)
++ ++.+.+.....+. ..++++....+++..+++.... .++..+++.++++++.+.|++.|+++.+ +..+
T Consensus 260 ~~------~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~L~~~g~~~~~--~~~~ 329 (401)
T 1fc4_A 260 RK------EVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVEA--GSELRDRLWANARQFREQMSAAGFTLAG--ADHA 329 (401)
T ss_dssp CH------HHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHHHHHHHHTTCCBCC--SSSS
T ss_pred CH------HHHHHHHHhCcCceeCCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHcCCcccC--CCCC
Confidence 76 6666665432111 1223344444454556665432 3567888999999999999999988763 4678
Q ss_pred eEEEEeC
Q 014724 406 LVLVDLR 412 (419)
Q Consensus 406 lv~vd~~ 412 (419)
++|+++.
T Consensus 330 ~~~~~~~ 336 (401)
T 1fc4_A 330 IIPVMLG 336 (401)
T ss_dssp EEEEEEE
T ss_pred EEEEEcC
Confidence 8899874
No 34
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.91 E-value=4e-23 Score=202.83 Aligned_cols=275 Identities=16% Similarity=0.120 Sum_probs=185.0
Q ss_pred cccccccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHH
Q 014724 104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 183 (419)
Q Consensus 104 ~i~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~ 183 (419)
.+++.+++..+++.|++++.+.+. + +.+ .+.......+++++++++| .+.++...+++++|++|+..
T Consensus 5 ~~~~~~gp~~~~~~v~~a~~~~~~------~-----~~~-~~~~~~~~~l~~~la~~~g-~~~~~~~v~~~~g~t~a~~~ 71 (366)
T 1m32_A 5 YLLLTPGPLTTSRTVKEAMLFDSC------T-----WDD-DYNIGVVEQIRQQLTALAT-ASEGYTSVLLQGSGSYAVEA 71 (366)
T ss_dssp CEECSSSSCCCCHHHHHTTCCCCC------T-----TSH-HHHTTTHHHHHHHHHHHHC-SSSSEEEEEEESCHHHHHHH
T ss_pred cccccCCCcCCCHHHHHHHhhhhc------C-----CCH-HHHHHHHHHHHHHHHHHhC-CCCcCcEEEEecChHHHHHH
Confidence 578888877789999999876431 1 111 1110111234578888999 33222123556677899999
Q ss_pred HHHHccCCCCEEEEeC-CCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhc-CCeEEEEcCCC
Q 014724 184 VYTAILKPHDRIMGLD-LPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-RPKLIIAGASA 261 (419)
Q Consensus 184 ~~~all~pGD~Vl~~~-~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~-~pklIi~~~s~ 261 (419)
++.+++++||+|++++ +.|++.+. ..+...|.. ++.++++ .++.+|+++|++.+++. ++++|++.+++
T Consensus 72 ~~~~~~~~gd~vi~~~~~~~~~~~~-------~~~~~~g~~--~~~v~~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~ 141 (366)
T 1m32_A 72 VLGSALGPQDKVLIVSNGAYGARMV-------EMAGLMGIA--HHAYDCG-EVARPDVQAIDAILNADPTISHIAMVHSE 141 (366)
T ss_dssp HHHHSCCTTCCEEEEESSHHHHHHH-------HHHHHHTCC--EEEEECC-TTSCCCHHHHHHHHHHCTTCCEEEEESEE
T ss_pred HHHHhcCCCCeEEEEeCCCccHHHH-------HHHHHhCCc--eEEEeCC-CCCCCCHHHHHHHHhcCCCeEEEEEeccc
Confidence 9999999999988775 43433211 012234554 3444444 35779999999999864 58898888877
Q ss_pred CC--CcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcCCCCCe-eEEEEeCCCcchhhH
Q 014724 262 YP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVEL 336 (419)
Q Consensus 262 ~p--~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l~Gprg-G~i~~~~~~~~~~~l 336 (419)
|| ...|+++|.++|++||++||+|++|..|.. +..+. +.|++++|+||++.||.| |++++++ ++
T Consensus 142 nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~-----~~~~~~~~~di~~~s~~K~~~~~~g~G~~~~~~------~~ 210 (366)
T 1m32_A 142 TTTGMLNPIDEVGALAHRYGKTYIVDAMSSFGGI-----PMDIAALHIDYLISSANKCIQGVPGFAFVIARE------QK 210 (366)
T ss_dssp TTTTEECCHHHHHHHHHHHTCEEEEECTTTTTTS-----CCCTTTTTCSEEEEESSSTTCCCSSEEEEEEEH------HH
T ss_pred CCcceecCHHHHHHHHHHcCCEEEEECCccccCc-----CccccccCccEEEecCcccccCCCceEEEEECH------HH
Confidence 75 467899999999999999999999875533 11232 589999999999977766 9999987 55
Q ss_pred HHHhhhcccC----------------C-CCCCChHHHHHHHHHHHHHhcChH-HHHHHHHHHHHHHHHHHHHHhCCcEEe
Q 014724 337 ESAINNAVFP----------------G-LQGGPHNHTIGGLAVCLKHAQSPE-FKVYQNKVVSNCRALASRLVELGYKLV 398 (419)
Q Consensus 337 ~~~i~~~~~~----------------~-~~g~p~~~~iaala~al~~~~~~~-~~~~~~~v~~n~~~l~~~L~~~G~~v~ 398 (419)
.+++.....+ + ..++++...++++..+++.....+ +++..+++.++++++.+.|++.|+++.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 290 (366)
T 1m32_A 211 LAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRALGFNTL 290 (366)
T ss_dssp HTTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHTTCCBS
T ss_pred HHhhcCCCCCccccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHHCCCeec
Confidence 5544321100 0 013455555656666776654333 577888999999999999999888776
Q ss_pred cCC--CcceeEEEEeC
Q 014724 399 SGG--SDNHLVLVDLR 412 (419)
Q Consensus 399 ~~~--t~~hlv~vd~~ 412 (419)
... ...+++++++.
T Consensus 291 ~~~~~~~~~~~~~~~~ 306 (366)
T 1m32_A 291 LDDELHSPIITAFYSP 306 (366)
T ss_dssp SCGGGBCSSEEEEECC
T ss_pred cCchhcCceEEEEEcC
Confidence 421 23457888875
No 35
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.91 E-value=2.3e-23 Score=212.03 Aligned_cols=297 Identities=17% Similarity=0.141 Sum_probs=193.7
Q ss_pred ccChhHHHHHHHHHHHhhhcccccccCCCChHHHHHHHhhhhhccC-CCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCC
Q 014724 85 EADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKY-SEGLPGKRYYGGNEYIDELETLCQKRALAAFNL 163 (419)
Q Consensus 85 ~~~~~~~~~~~~e~~r~~~~i~L~~sen~~~~~V~eal~~~l~~~y-~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~ 163 (419)
+-.+++.+.++++.+++...++.+..+| .+.|++++.+...... ..+..+ |..+....++ +++++++++|.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~n--~~~vl~A~~~~~~~~~~~~~~~g--~~y~~~~~~~----l~~~la~~~g~ 80 (431)
T 3ht4_A 9 EKIAPIVKEVESQITEVHKRADEVIESN--QFRVLESFGKHKISDSHFIPTTG--YGYDDIGRDT----LEKVYADVFGA 80 (431)
T ss_dssp TTSHHHHHHHHHHTHHHHHHHHHHHHHH--HHHHHHHHHHTTCCGGGSCCCCT--TCCSCHHHHH----HHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHhchhhhhcCCCCC--CCCChhhHHH----HHHHHHHHhCC
Confidence 3344555555567677778888877766 5788888876532111 111112 2222232333 44788999999
Q ss_pred CCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeC-CCCCccccCcccc--ccccccccccccEEEecccCCCCCCCCH
Q 014724 164 DENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLD-LPHGGHLSHGFMT--PKRRVSGTSIYFESMPYRLDESTGLVDY 240 (419)
Q Consensus 164 ~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~-~~~~g~~s~~~~~--~~~~i~~~g~~~~~v~~~~~~~~~~iD~ 240 (419)
+.+. +.++++||++|+..++.++++|||+|++++ +.|+++......+ ....+...|. +++.++.++ ++.+|+
T Consensus 81 ~~~~--~~i~~~sGt~Ai~~al~al~~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~--~~~~v~~~~-~~~~d~ 155 (431)
T 3ht4_A 81 EAGL--VRPQIISGTHAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNI--GYNAVPLTE-GGLVDF 155 (431)
T ss_dssp SEEC--CBTTSCSHHHHHHHHHHTTCCTTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTC--EEEECCBCT-TSSBCH
T ss_pred Cccc--ccceeeCHHHHHHHHHHHhCCCCCEEEEeCCCCchhHHHHHhhcccccchHHHcCC--EEEEeCCCC-CCCcCH
Confidence 8641 234578999999999999999999999998 8877654210000 0001122344 556666653 588999
Q ss_pred HHHHHHhhhcCCeEEEEcC-CCCCC-----cCChHHHHHHHHH--hCCEEEEeccccccccccCCcCCCCC-CCcEEEeC
Q 014724 241 DMLEKTAILFRPKLIIAGA-SAYPR-----DFDYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPFK-YCDVVTTT 311 (419)
Q Consensus 241 d~Le~~l~~~~pklIi~~~-s~~p~-----~~dl~~I~~ia~~--~ga~livD~ah~~Gl~~~g~~~~~~~-~~Div~~S 311 (419)
++|++.+++ ++|+|++++ ++||+ ..|+++|+++|++ +|++|++|++|..+... ..++. ++|++++|
T Consensus 156 e~l~~~l~~-~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~----~~~~~~g~Di~~~S 230 (431)
T 3ht4_A 156 EAVAAAIHS-NTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEE----QEPCHVGADLMAGS 230 (431)
T ss_dssp HHHHHHCCT-TEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSS----CCGGGTTCSEEEEE
T ss_pred HHHHhhcCC-CCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccC----CCccccCCeEEEcC
Confidence 999999975 899999885 56553 3478999999999 99999999997655321 12333 78999999
Q ss_pred CCCcCCC---CCeeEEEEeCCCcchhhHHHHhhhcccC-CC--CCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHH
Q 014724 312 THKSLRG---PRGGMIFFKKDPVLGVELESAINNAVFP-GL--QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRA 385 (419)
Q Consensus 312 ~hK~l~G---prgG~i~~~~~~~~~~~l~~~i~~~~~~-~~--~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~ 385 (419)
+||++.| +.||++++++ ++.+++...... +. ..++.......+..++.. ...+.++..+++++
T Consensus 231 ~sK~lgg~~~~~GG~v~~~~------~li~~l~~~~~~~~~g~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~a~~ 299 (431)
T 3ht4_A 231 LIKNPGGGIVKTGGYIVGKE------QYVEACAYRLTSPGIGAEAGASLYSLQEMYQGFFL-----APHVAGQALKGAIF 299 (431)
T ss_dssp TTSGGGTTTCSSCEEEEECH------HHHHHHHHHHSCTTTTTSCSCCCSCSHHHHHHHHH-----HHHHHHHHHHHHHH
T ss_pred ccccCCCCCCCceEEEEecH------HHHHHHHHHhccCCcccccCccHHHHHHHHhHhhh-----HHHHHHHHHHHHHH
Confidence 9999865 7899999987 677766542221 11 112211111111222222 35667889999999
Q ss_pred HHHHHHhCCcEEecCCCcce-----eEEEEeC
Q 014724 386 LASRLVELGYKLVSGGSDNH-----LVLVDLR 412 (419)
Q Consensus 386 l~~~L~~~G~~v~~~~t~~h-----lv~vd~~ 412 (419)
+++.|+++|+++.+. .+| ++.|.+.
T Consensus 300 l~~~L~~~g~~v~p~--~~~~~~~li~~i~l~ 329 (431)
T 3ht4_A 300 TAAFLEKLGMNTSPA--WNAPRTDLIQSVQFD 329 (431)
T ss_dssp HHHHHHHHTCCEESC--TTSCCSSSCCEEECC
T ss_pred HHHHHHhCcCEecCC--CCCCCccEEEEEEeC
Confidence 999999999988653 444 6666664
No 36
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.91 E-value=6.4e-23 Score=206.51 Aligned_cols=307 Identities=11% Similarity=0.059 Sum_probs=208.0
Q ss_pred hhccccccChhHHHHHHHHHHHhhhcccccccCCC--ChHHHHHHHhhhhhccC-CCCCCCCCCCCchhHHHHHHHHHHH
Q 014724 79 VDYSLGEADPEVCEIITKEKERQFKSLELIASENF--TSRAVMEAVGSCLTNKY-SEGLPGKRYYGGNEYIDELETLCQK 155 (419)
Q Consensus 79 ~~~~l~~~~~~~~~~~~~e~~r~~~~i~L~~sen~--~~~~V~eal~~~l~~~y-~~g~p~~r~~~g~~~~~~lE~~~~~ 155 (419)
+.+++..+++..+..+.+.. ...+.|+|..+++. +++.|++++.+.+.... ..+|+.. .| ..++++.+.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~-~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~---~g---~~~lr~~la~ 78 (422)
T 3fvs_A 6 QARRLDGIDYNPWVEFVKLA-SEHDVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKT---FG---YPPLTKILAS 78 (422)
T ss_dssp SCGGGTTCCCCHHHHHHHHH-HTSCCEECCCSSCSSCCCHHHHHHHHHHHHSCGGGGSCCCT---TC---CHHHHHHHHH
T ss_pred HHHHhhccCccHHHHHHHHh-hcCCceEeCCCCCCCCCCHHHHHHHHHHHhCCCccCCCCCC---CC---CHHHHHHHHH
Confidence 45667778877655444332 23567888887753 68999999998876432 1244331 12 2356667778
Q ss_pred HHHHHcCCCCCCCceeEecCC-hHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCC-
Q 014724 156 RALAAFNLDENKWGVNVQPLS-GSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE- 233 (419)
Q Consensus 156 ~la~~~g~~~~~~~v~V~~~s-Gt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~- 233 (419)
++.+.+|.+.+. ..+|++++ |++|+..++.++++|||+|++..|.|.++.. .+...|. +++.+++++
T Consensus 79 ~~~~~~g~~~~~-~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~--~~~~~~~~~~ 147 (422)
T 3fvs_A 79 FFGELLGQEIDP-LRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEP--------MTMMAGG--RPVFVSLKPG 147 (422)
T ss_dssp HHHHHHTCCCCH-HHHEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTC--EEEEEECBCC
T ss_pred HHHHhhCCCCCC-CCcEEEECChHHHHHHHHHHHcCCCCEEEEcCCCchhhHH--------HHHHcCC--EEEEEecccc
Confidence 888888876421 01244454 5789999999999999999999998876531 2234555 344444442
Q ss_pred ----------CCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cC---ChHHHHHHHHHhCCEEEEeccccccccccCCc
Q 014724 234 ----------STGLVDYDMLEKTAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVV 298 (419)
Q Consensus 234 ----------~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~---dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~ 298 (419)
+++.+|+++|++.+++ ++++|++++++||+ .. ++++|+++|++||++||+|++|. ++.+.+..
T Consensus 148 ~~~~G~~~~~~~~~~d~~~l~~~~~~-~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~-~~~~~~~~ 225 (422)
T 3fvs_A 148 PIQNGELGSSSNWQLDPMELAGKFTS-RTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQ-WMVYDGHQ 225 (422)
T ss_dssp CCCSSSCCBGGGSBCCHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTT-TCBCTTCC
T ss_pred cccccccccccCCCCCHHHHHhhcCC-CceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccch-hhccCCCC
Confidence 2457999999999874 78999999999885 33 58999999999999999999974 44444322
Q ss_pred CCCC---C---CCcEEEeCCCCcC--CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHh---
Q 014724 299 ADPF---K---YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHA--- 367 (419)
Q Consensus 299 ~~~~---~---~~Div~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~--- 367 (419)
+.++ . +.+++++|+||+| +|+|.|++++++ ++.+.+......... +++....+++..++...
T Consensus 226 ~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~------~~~~~~~~~~~~~~~-~~~~~~~~a~~~~l~~~~~~ 298 (422)
T 3fvs_A 226 HISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPD------HIMKHLRTVHQNSVF-HCPTQSQAAVAESFEREQLL 298 (422)
T ss_dssp CCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEECCH------HHHHHHHHHHHTTTC-CCCHHHHHHHHHHHHHHHHT
T ss_pred CCChhhcccccCcEEEEecchhccCCccceEEEEEeCH------HHHHHHHHHHhhccC-CCCcHHHHHHHHHHhhcccc
Confidence 2122 1 2348899999987 578889999887 566666543322222 22333444445556541
Q ss_pred ---cChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeEEEEeCC
Q 014724 368 ---QSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 368 ---~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~vd~~~ 413 (419)
....+++..+++.++++++.+.|++.|+++... ...+++|++++.
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~~~~~ 346 (422)
T 3fvs_A 299 FRQPSSYFVQFPQAMQRCRDHMIRSLQSVGLKPIIP-QGSYFLITDISD 346 (422)
T ss_dssp TTCTTCHHHHHHHHHHHHHHHHHHHHHTTTCEEEBC-SBSSEEEEECHH
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHcCCeecCC-CeeeEEEEechh
Confidence 234567888899999999999999999987653 456789998864
No 37
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.91 E-value=8.8e-23 Score=206.83 Aligned_cols=274 Identities=19% Similarity=0.209 Sum_probs=191.7
Q ss_pred cccccccCC---CChHHHHHHHhhhhhccCCCCCCCCCCCCch-hHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHH
Q 014724 104 SLELIASEN---FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGN-EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP 179 (419)
Q Consensus 104 ~i~L~~sen---~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~-~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~ 179 (419)
.|+|..++. ..++.|++++.+.+.. |..++++.++..|. +...++ ++++++++|.+. .++++||++
T Consensus 66 ~id~~~~~~lg~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~G~~~~~~~l----~~~la~~~g~~~-----~i~~~sGs~ 135 (427)
T 2w8t_A 66 TILLGTYNYMGMTFDPDVIAAGKEALEK-FGSGTCGSRMLNGTFHDHMEV----EQALRDFYGTTG-----AIVFSTGYM 135 (427)
T ss_dssp EEECSCCCTTCGGGCHHHHHHHHHHHHH-HCSCCCSCTTTTCCCHHHHHH----HHHHHHHHTCSE-----EEEESCHHH
T ss_pred EEEEECcccccCCCCHHHHHHHHHHHHH-hCCCCcccccccCCcHHHHHH----HHHHHHHhCCCc-----eEEecCcHH
Confidence 466766642 2579999999888754 33456555555553 333344 477888888763 478899999
Q ss_pred HHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhc---CCeEEE
Q 014724 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF---RPKLII 256 (419)
Q Consensus 180 A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~---~pklIi 256 (419)
|+..++.+++++||.|++..+.|+++.. .+...|. +++.++ .+|+++|++.+++. ++++|+
T Consensus 136 a~~~al~~l~~~gd~vl~~~~~h~~~~~--------~~~~~g~--~~~~~~------~~d~~~le~~l~~~~~~~~~~v~ 199 (427)
T 2w8t_A 136 ANLGIISTLAGKGEYVILDADSHASIYD--------GCQQGNA--EIVRFR------HNSVEDLDKRLGRLPKEPAKLVV 199 (427)
T ss_dssp HHHHHHHHHSCTTCEEEEETTCCHHHHH--------HHHHSCS--EEEEEC------TTCHHHHHHHHHTSCSSSCEEEE
T ss_pred HHHHHHHHhcCCCCEEEECCcccHHHHH--------HHHHcCC--eeEEeC------CCCHHHHHHHHHhccCCCCeEEE
Confidence 9999999999999999999998876542 2334554 445543 26999999999764 688999
Q ss_pred EcCCCCC--CcCChHHHHHHHHHhCCEEEEecccccccccc-CC-cC--CCCC-CCcEEEeCCCCcCCCCCeeEEEEeCC
Q 014724 257 AGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAA-SV-VA--DPFK-YCDVVTTTTHKSLRGPRGGMIFFKKD 329 (419)
Q Consensus 257 ~~~s~~p--~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~-g~-~~--~~~~-~~Div~~S~hK~l~GprgG~i~~~~~ 329 (419)
+++++|+ ...++++|+++|++||++||+|++|..|.... +. .. ..+. ++|++++|+||+| |++||++++++
T Consensus 200 ~~~~~n~tG~~~~l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~~-g~~gG~v~~~~- 277 (427)
T 2w8t_A 200 LEGVYSMLGDIAPLKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSV-GTVGGFVVSNH- 277 (427)
T ss_dssp EESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTT-CSCCEEEEECC-
T ss_pred EcCCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecchhhh-ccCCCEEEeCH-
Confidence 9887776 36789999999999999999999987665431 11 00 1122 5799999999998 58889999987
Q ss_pred CcchhhHHHHhhhcccCC-CCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeEE
Q 014724 330 PVLGVELESAINNAVFPG-LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVL 408 (419)
Q Consensus 330 ~~~~~~l~~~i~~~~~~~-~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~ 408 (419)
++.+.+.....++ ..++++...++++..+++.+. +.++..+++.+++++|.+.|++.|+++.......++++
T Consensus 278 -----~l~~~l~~~~~~~~~~~~~~~~~~aa~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~ 350 (427)
T 2w8t_A 278 -----PKFEAVRLACRPYIFTASLPPSVVATATTSIRKLM--TAHEKRERLWSNARALHGGLKAMGFRLGTETCDSAIVA 350 (427)
T ss_dssp -----TTGGGGGGTCHHHHSSCCCCHHHHHHHHHHHHHHT--SCHHHHHHHHHHHHHHHHHHHHHTCEESCSSCCSSEEE
T ss_pred -----HHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHcCCcccCCCCCCCEEE
Confidence 3444443321111 122344445555555676653 24677888999999999999988998762222457888
Q ss_pred EEeC
Q 014724 409 VDLR 412 (419)
Q Consensus 409 vd~~ 412 (419)
+++.
T Consensus 351 ~~~~ 354 (427)
T 2w8t_A 351 VMLE 354 (427)
T ss_dssp EEES
T ss_pred EEEC
Confidence 8875
No 38
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.91 E-value=2.8e-23 Score=206.50 Aligned_cols=280 Identities=15% Similarity=0.117 Sum_probs=192.0
Q ss_pred hcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCC--CCCCCceeEecC-Ch
Q 014724 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPL-SG 177 (419)
Q Consensus 103 ~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~--~~~~~~v~V~~~-sG 177 (419)
+.|+|..+++. .++.|++++.+.+.+. ..+|+.. ..++++.+++++++.+|. +++ +|+++ +|
T Consensus 28 ~~i~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~--------~~~l~~~la~~l~~~~g~~~~~~----~i~~~~g~ 94 (391)
T 3dzz_A 28 KELPMWIAEMDFKIAPEIMASMEEKLKVA-AFGYESV--------PAEYYKAVADWEEIEHRARPKED----WCVFASGV 94 (391)
T ss_dssp TCEECCSSCCSSCCCHHHHHHHHHHHTTC-CCCCBCC--------CHHHHHHHHHHHHHHHSCCCCGG----GEEEESCH
T ss_pred CceeccccCCCCCCCHHHHHHHHHHHhcC-cCCCCCC--------CHHHHHHHHHHHHHHhCCCCCHH----HEEECCCH
Confidence 56777766642 5899999999887542 2234321 236666778899999884 443 34455 45
Q ss_pred HHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccC--CCCCCCCHHHHHHHhhhcCCeEE
Q 014724 178 SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD--ESTGLVDYDMLEKTAILFRPKLI 255 (419)
Q Consensus 178 t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~--~~~~~iD~d~Le~~l~~~~pklI 255 (419)
++|+.+++.++++|||+|++..|.|.++.. .+...|. +++.++++ ..++.+|+++|++.+++.++|+|
T Consensus 95 ~~a~~~~~~~l~~~gd~vl~~~~~~~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v 164 (391)
T 3dzz_A 95 VPAISAMVRQFTSPGDQILVQEPVYNMFYS--------VIEGNGR--RVISSDLIYENSKYSVNWADLEEKLATPSVRMM 164 (391)
T ss_dssp HHHHHHHHHHHSCTTCEEEECSSCCHHHHH--------HHHHTTC--EEEECCCEEETTEEECCHHHHHHHHTSTTEEEE
T ss_pred HHHHHHHHHHhCCCCCeEEECCCCcHHHHH--------HHHHcCC--EEEEeeeeecCCceeecHHHHHHHHhccCceEE
Confidence 789999999999999999999998876531 2234555 44555553 23345999999999975689999
Q ss_pred EEcCCCCCC--c---CChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC-----CCc--EEEeCCCCcC--CCCCe
Q 014724 256 IAGASAYPR--D---FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-----YCD--VVTTTTHKSL--RGPRG 321 (419)
Q Consensus 256 i~~~s~~p~--~---~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~-----~~D--iv~~S~hK~l--~Gprg 321 (419)
++++++||+ . .++++|+++|++||++||+|++|. ++...+....++. ..| ++++|+||++ +|+|.
T Consensus 165 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~ 243 (391)
T 3dzz_A 165 VFCNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHG-DLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHA 243 (391)
T ss_dssp EEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTT-TCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCC
T ss_pred EEECCCCCCCcccCHHHHHHHHHHHHHCCCEEEEecccc-cccCCCCCceehhhcCccccCcEEEEEeChhhccccchhh
Confidence 999888885 3 468999999999999999999974 4343332122221 256 8999999986 67889
Q ss_pred eEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC--CcEEec
Q 014724 322 GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLVS 399 (419)
Q Consensus 322 G~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~--G~~v~~ 399 (419)
|+++++++ ++.+.+..........+++....+++..++... ....++..+++.++++++.+.|++. |+++..
T Consensus 244 G~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 317 (391)
T 3dzz_A 244 ACAIIPNP-----DLRARAEESFFLAGIGEPNLLAIPAAIAAYEEG-HDWLRELKQVLRDNFAYAREFLAKEVPEVKVLD 317 (391)
T ss_dssp EEEECCSH-----HHHHHHHHHHHHHTCSSCCTTHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECC
T ss_pred eEEEECCH-----HHHHHHHHHHHhhccCCCCHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEec
Confidence 99999743 666666543211111122333344444456552 2345778888999999999999984 898775
Q ss_pred CCCcceeEEEEeCC
Q 014724 400 GGSDNHLVLVDLRP 413 (419)
Q Consensus 400 ~~t~~hlv~vd~~~ 413 (419)
+ ..+.++|+++..
T Consensus 318 ~-~~~~~~~~~~~~ 330 (391)
T 3dzz_A 318 S-NASYLAWVDISA 330 (391)
T ss_dssp C-CBSSEEEEECGG
T ss_pred c-CceEEEEEehhh
Confidence 3 345667888864
No 39
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.91 E-value=4.5e-23 Score=206.66 Aligned_cols=308 Identities=12% Similarity=0.020 Sum_probs=202.7
Q ss_pred ccccccChhHHHHHHHHHHHhhhcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 014724 81 YSLGEADPEVCEIITKEKERQFKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRAL 158 (419)
Q Consensus 81 ~~l~~~~~~~~~~~~~e~~r~~~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la 158 (419)
+++..++++.+..+.+. ....+.|+|..+++. +++.|++++.+.+......+|+.. .| ..++++.+.+++.
T Consensus 3 ~~~~~~~~~~~~~~~~~-~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~---~g---~~~l~~~la~~~~ 75 (410)
T 3e2y_A 3 KRIEGLDSNVWVEFTKL-AADPSVVNLGQGFPDISPPSYVKEELSKAAFIDNMNQYTRG---FG---HPALVKALSCLYG 75 (410)
T ss_dssp GGGTTCCCCHHHHTTTT-TTSTTSEECSSCCCCSCCCHHHHHHHHHHHTCGGGGSCCCT---TC---CHHHHHHHHHHHH
T ss_pred hhhccCCccHHHHHHHH-hcCCCeEEecCCCCCCCCCHHHHHHHHHHHhCccccCCCCC---CC---hHHHHHHHHHHHH
Confidence 34555666654433221 112456888877643 689999999988764322344431 12 2366666777777
Q ss_pred HHcCCCCCCCceeEecCC-hHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccC-----
Q 014724 159 AAFNLDENKWGVNVQPLS-GSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD----- 232 (419)
Q Consensus 159 ~~~g~~~~~~~v~V~~~s-Gt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~----- 232 (419)
+.+|.+.+. ..+|++++ |++|+..++.++++|||+|++..|.|.++.. .+...|..+..++++..
T Consensus 76 ~~~~~~~~~-~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~~~~~~~~~~g~ 146 (410)
T 3e2y_A 76 KIYQRQIDP-NEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEP--------MVRMAGAVPVFIPLRSKPTDGM 146 (410)
T ss_dssp HHHTSCCCT-TTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTCEEEEEECEECCCCSS
T ss_pred HHhCCCCCC-CCCEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHH--------HHHHcCCEEEEEeccccccccc
Confidence 777765321 01244555 5789999999999999999999998876531 22345554444443210
Q ss_pred ---CCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--c---CChHHHHHHHHHhCCEEEEeccccccccccCCcCCCC--
Q 014724 233 ---ESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--D---FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-- 302 (419)
Q Consensus 233 ---~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~---~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~-- 302 (419)
.+++.+|++++++.+++ ++++|++++++||+ . .++++|+++|++||++||+|++|. ++.+.+....++
T Consensus 147 ~~~~~~~~~d~~~l~~~~~~-~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~-~~~~~~~~~~~~~~ 224 (410)
T 3e2y_A 147 KWTSSDWTFDPRELESKFSS-KTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYE-WLVYTGHTHVKIAT 224 (410)
T ss_dssp CCBGGGEECCHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTT-TCBCTTCCCCCGGG
T ss_pred cccccCCcCCHHHHHhhcCC-CceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhh-hcccCCCCCCCHHH
Confidence 12456899999999864 78999999999885 2 368999999999999999999974 444433221111
Q ss_pred -C---CCcEEEeCCCCcC--CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHH------hcCh
Q 014724 303 -K---YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKH------AQSP 370 (419)
Q Consensus 303 -~---~~Div~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~------~~~~ 370 (419)
. ..++++.|+||+| +|+|.|++++++ ++.+.+.........+. +....+++..++.. ....
T Consensus 225 ~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~------~~~~~~~~~~~~~~~~~-~~~~~~a~~~~l~~~~~~~~~~~~ 297 (410)
T 3e2y_A 225 LPGMWERTITIGSAGKTFSVTGWKLGWSIGPA------HLIKHLQTVQQNSFYTC-ATPLQAALAEAFWIDIKRMDDPEC 297 (410)
T ss_dssp STTCGGGEEEEEEHHHHSSCGGGCCEEEECCH------HHHHHHHHHHHTTTCCC-CHHHHHHHHHHHHHHHTTTTSTTS
T ss_pred cCCccCeEEEEecchhhcCCCCceEEEEEECH------HHHHHHHHHHHhhccCC-ChHHHHHHHHHHHhhhccccchHH
Confidence 1 2348899999987 578889999887 56666654332222222 33334444445553 1234
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeEEEEeCCc
Q 014724 371 EFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRPM 414 (419)
Q Consensus 371 ~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~vd~~~~ 414 (419)
.+++..+++.++++++.+.|++.|+++... ...+++|+++...
T Consensus 298 ~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~~~~~~ 340 (410)
T 3e2y_A 298 YFNSLPKELEVKRDRMVRLLNSVGLKPIVP-DGGYFIIADVSSL 340 (410)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCEEEBC-SBSSEEEEECGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCeecCC-CccEEEEEEchhh
Confidence 467888889999999999999999987653 4567899998653
No 40
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.91 E-value=1.1e-22 Score=199.88 Aligned_cols=270 Identities=10% Similarity=0.035 Sum_probs=190.9
Q ss_pred hhcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecC-ChH
Q 014724 102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPL-SGS 178 (419)
Q Consensus 102 ~~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~-sGt 178 (419)
.+.|+|..+++. +++.|++++.+.+... .+||. ....+ .++++++++|++++ +++++ +|+
T Consensus 16 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~--~~y~~-------~~~~~----l~~~la~~~~~~~~----~i~~~~g~~ 78 (354)
T 3ly1_A 16 DNPIRINFNENPLGMSPKAQAAARDAVVKA--NRYAK-------NEILM----LGNKLAAHHQVEAP----SILLTAGSS 78 (354)
T ss_dssp SSCEECSSCCCSSCCCHHHHHHHHHTGGGT--TSCCH-------HHHHH----HHHHHHHHTTSCGG----GEEEESHHH
T ss_pred CceEEccCCCCCCCCCHHHHHHHHHHHhhC--cCCCC-------CchHH----HHHHHHHHhCCChH----HEEEeCChH
Confidence 356888888765 5899999999887532 23431 22233 45788899998764 24454 457
Q ss_pred HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhh-cCCeEEEE
Q 014724 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL-FRPKLIIA 257 (419)
Q Consensus 179 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~-~~pklIi~ 257 (419)
+|+..++.++++|||+|++..|.|.++.. .+...|. ++++++.+ +++.+|+++|++.+++ .++++|++
T Consensus 79 ~a~~~~~~~l~~~gd~vl~~~~~~~~~~~--------~~~~~g~--~~~~~~~~-~~~~~d~~~l~~~l~~~~~~~~v~l 147 (354)
T 3ly1_A 79 EGIRAAIEAYASLEAQLVIPELTYGDGEH--------FAKIAGM--KVTKVKML-DNWAFDIEGLKAAVAAYSGPSIVYL 147 (354)
T ss_dssp HHHHHHHHHHCCTTCEEEEESSSCTHHHH--------HHHHTTC--EEEEECCC-TTSCCCHHHHHHHHHTCSSCEEEEE
T ss_pred HHHHHHHHHHhCCCCeEEECCCCchHHHH--------HHHHcCC--EEEEecCC-CCCCCCHHHHHHHhccCCCCCEEEE
Confidence 89999999999999999999998876532 2234555 55555555 3588999999999974 47999999
Q ss_pred cCCCCCC--cCChHHHHHHHHH--hCCEEEEeccccccccccCCcCCCCC------CCcEEEeCCCCcC--CCCCeeEEE
Q 014724 258 GASAYPR--DFDYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPFK------YCDVVTTTTHKSL--RGPRGGMIF 325 (419)
Q Consensus 258 ~~s~~p~--~~dl~~I~~ia~~--~ga~livD~ah~~Gl~~~g~~~~~~~------~~Div~~S~hK~l--~GprgG~i~ 325 (419)
++++||+ ..+.+++.++++. +|+++|+|++|. ++...+.....+. +.+++++|+||++ +|.|.|+++
T Consensus 148 ~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~ 226 (354)
T 3ly1_A 148 VNPNNPTGTITPADVIEPWIASKPANTMFIVDEAYA-EFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAV 226 (354)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHTCCTTEEEEEECTTG-GGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEE
T ss_pred eCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEeccHH-HhccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeee
Confidence 8888874 5677888888777 999999999975 4444332222221 3348899999997 577889999
Q ss_pred EeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcce
Q 014724 326 FKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNH 405 (419)
Q Consensus 326 ~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~h 405 (419)
.++ ++.+.+.....++ +++....+++..+++.. ..+++..+++.++++++.+.|++.|+++.++ ..+
T Consensus 227 ~~~------~~~~~~~~~~~~~---~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~--~~~ 293 (354)
T 3ly1_A 227 AHP------TVIALMGRYVAGE---KINFSGVDAALASMNDS--AFITYSKKSNDVSRQILLKALEDLKLPYLPS--EGN 293 (354)
T ss_dssp CCH------HHHHHHGGGTTCS---CCCHHHHHHHHHHTTCH--HHHHHHHHHHHHHHHHHHHHHHHHTCCBCCC--CSS
T ss_pred cCH------HHHHHHHHhcCCC---CCCHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHHHHHHHCCCeECCC--Cce
Confidence 876 6777776654432 33444444444444422 3457788889999999999999888887642 445
Q ss_pred eEEEEeCC
Q 014724 406 LVLVDLRP 413 (419)
Q Consensus 406 lv~vd~~~ 413 (419)
++|+++..
T Consensus 294 ~~~~~~~~ 301 (354)
T 3ly1_A 294 FVFHQLVV 301 (354)
T ss_dssp EEEEECSS
T ss_pred EEEEECCC
Confidence 68988864
No 41
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.91 E-value=1.1e-22 Score=204.64 Aligned_cols=303 Identities=15% Similarity=0.127 Sum_probs=202.4
Q ss_pred hccccccChhHHHHHHHHHHHhhhcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q 014724 80 DYSLGEADPEVCEIITKEKERQFKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRA 157 (419)
Q Consensus 80 ~~~l~~~~~~~~~~~~~e~~r~~~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~l 157 (419)
++++..+++.++..+.+... ....|+|..+++. .++.+++++.+.+.+. ..+|+.. .| ..++++.+.+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~-~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~---~g---~~~l~~~la~~~ 75 (411)
T 2o0r_A 4 VSRLRPYATTVFAEMSALAT-RIGAVNLGQGFPDEDGPPKMLQAAQDAIAGG-VNQYPPG---PG---SAPLRRAIAAQR 75 (411)
T ss_dssp CGGGGGGSSCHHHHHHHHHH-TTTCEESSCSSCSSCCCHHHHHHHHHHHHTT-CCSCCCT---TC---CHHHHHHHHHHH
T ss_pred hhHhHhcCccHHHHHHHHhh-cCCeeeccCcCCCCCCCHHHHHHHHHHHhcC-CCCCCCC---CC---CHHHHHHHHHHH
Confidence 45566777777766654332 3456888877643 5799999999888542 2234321 12 236777777888
Q ss_pred HHHcCCCCC-CCceeEecC-ChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCC-
Q 014724 158 LAAFNLDEN-KWGVNVQPL-SGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES- 234 (419)
Q Consensus 158 a~~~g~~~~-~~~v~V~~~-sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~- 234 (419)
.+.+|.+.+ +. +|+++ +|++|+..++.++++|||+|++.+|.|.++.. .+...|.. ++.++++++
T Consensus 76 ~~~~g~~~~~~~--~v~~t~g~~~al~~~~~~~~~~gd~Vl~~~~~y~~~~~--------~~~~~g~~--~~~v~~~~~~ 143 (411)
T 2o0r_A 76 RRHFGVDYDPET--EVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSP--------VVAMAGAH--RVTVPLVPDG 143 (411)
T ss_dssp HHHHCCCCCTTT--SEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTCE--EEEEECEEET
T ss_pred HHHcCCCCCCCc--eEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHH--------HHHHcCCE--EEEeeccccc
Confidence 887886431 10 24444 55789999999999999999999998877531 22345554 444444432
Q ss_pred -CCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCC---hHHHHHHHHHhCCEEEEeccccccccccCCcCCC---CC--
Q 014724 235 -TGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP---FK-- 303 (419)
Q Consensus 235 -~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~d---l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~---~~-- 303 (419)
++.+|+++|++.+++ ++++|++++++||+ ..+ +++|+++|+++|++||+|++|.. +.+.+..+.+ ++
T Consensus 144 ~~~~~d~~~l~~~l~~-~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~g~~~~~~~~~~~~ 221 (411)
T 2o0r_A 144 RGFALDADALRRAVTP-RTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEH-LVFDHARHLPLAGFDGM 221 (411)
T ss_dssp TEEECCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTT-CBCTTCCCCCGGGSTTT
T ss_pred cCCCCCHHHHHHhhcc-CceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccc-cccCCCCCcChhhccCC
Confidence 356999999999874 78999988888874 333 58999999999999999999754 3333321111 11
Q ss_pred -CCcEEEeCCCCcC--CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHH
Q 014724 304 -YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVV 380 (419)
Q Consensus 304 -~~Div~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~ 380 (419)
+.|++++|+||+| +|.|.|++++++ ++.+.+.........+.+. ...+++..+++.. ...+++..+++.
T Consensus 222 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~------~~~~~l~~~~~~~~~~~~~-~~~~a~~~~l~~~-~~~~~~~~~~~~ 293 (411)
T 2o0r_A 222 AERTITISSAAKMFNCTGWKIGWACGPA------ELIAGVRAAKQYLSYVGGA-PFQPAVALALDTE-DAWVAALRNSLR 293 (411)
T ss_dssp GGGEEEEEEHHHHTTCTTTCEEEEECCH------HHHHHHHHHHHHHTSCCCT-THHHHHHHHHHHC-HHHHHHHHHHHH
T ss_pred CCCEEEEeechhhcCCccceEEEEeeCH------HHHHHHHHHHhhccCCCCh-HHHHHHHHHHhCC-hHHHHHHHHHHH
Confidence 4689999999987 577899999876 5666554322111111222 2233444456543 234577888899
Q ss_pred HHHHHHHHHHHhCCcEEecCCCcceeEEEEeCC
Q 014724 381 SNCRALASRLVELGYKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 381 ~n~~~l~~~L~~~G~~v~~~~t~~hlv~vd~~~ 413 (419)
++++++.+.|++.|+++... ..+.++|+++..
T Consensus 294 ~~~~~l~~~L~~~g~~~~~~-~~g~~~~~~~~~ 325 (411)
T 2o0r_A 294 ARRDRLAAGLTEIGFAVHDS-YGTYFLCADPRP 325 (411)
T ss_dssp HHHHHHHHHHHHHTCEECCC-CBSSEEEEECGG
T ss_pred HHHHHHHHHHHHcCCEecCC-CeeEEEEEecCC
Confidence 99999999999889987653 345678988864
No 42
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.91 E-value=1e-22 Score=203.16 Aligned_cols=280 Identities=13% Similarity=0.073 Sum_probs=184.9
Q ss_pred hhcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHH
Q 014724 102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP 179 (419)
Q Consensus 102 ~~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~ 179 (419)
++.|+|..+++. +++.|++++.+.+.+.. .+|+.. .| ..++++.+.+++.+.+|.+.+.- ..+++++|++
T Consensus 31 ~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~-~~y~~~---~g---~~~lr~~ia~~~~~~~g~~~~~~-~v~~t~g~~~ 102 (391)
T 3h14_A 31 RRIIHMEVGQPGTGAPRGAVEALAKSLETDA-LGYTVA---LG---LPALRQRIARLYGEWYGVDLDPG-RVVITPGSSG 102 (391)
T ss_dssp CCCEECCCSSCSSCSCHHHHHHHHHHHC--------------C---CHHHHHHHHHHHHHHHCCCCCGG-GEEEESSHHH
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhcCC-CCCCCC---CC---hHHHHHHHHHHHHHHhCCCCCHH-HEEEecChHH
Confidence 567889888754 47899999988875422 234321 12 23666677777777778543211 2244555678
Q ss_pred HHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCC-CCCCCHHHHHHHhhhcCCeEEEEc
Q 014724 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAG 258 (419)
Q Consensus 180 A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~-~~~iD~d~Le~~l~~~~pklIi~~ 258 (419)
|+..++.++++|||+|++.+|.|.++.. .+...|. +++.++++++ ++.+|+++|++. ++++|+++
T Consensus 103 al~~~~~~l~~~gd~vl~~~p~~~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~----~~~~v~i~ 168 (391)
T 3h14_A 103 GFLLAFTALFDSGDRVGIGAPGYPSYRQ--------ILRALGL--VPVDLPTAPENRLQPVPADFAGL----DLAGLMVA 168 (391)
T ss_dssp HHHHHHHHHCCTTCEEEEEESCCHHHHH--------HHHHTTC--EEEEEECCGGGTTSCCHHHHTTS----CCSEEEEE
T ss_pred HHHHHHHHhcCCCCEEEEcCCCCccHHH--------HHHHcCC--EEEEeecCcccCCCCCHHHHHhc----CCeEEEEC
Confidence 9999999999999999999998866531 2334565 4444445432 457899999875 78999998
Q ss_pred CCCCCC--cCC---hHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcC--CCCCeeEEEEeCC
Q 014724 259 ASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSL--RGPRGGMIFFKKD 329 (419)
Q Consensus 259 ~s~~p~--~~d---l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l--~GprgG~i~~~~~ 329 (419)
+++||+ ..+ +++|+++|++||++||+|++|. ++.+.+....... ..+++++|+||++ +|.|.|++++++
T Consensus 169 ~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~- 246 (391)
T 3h14_A 169 SPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYH-GIEYEAKAVTALELTDECYVINSFSKYFSMTGWRVGWMVVPE- 246 (391)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTT-TCBSSSCCCCGGGTCSSSEEEEESSSTTCCTTSCCEEEECCG-
T ss_pred CCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcch-hcccCCCCcChhhcCCCEEEEEechhccCCccceeEEEEeCH-
Confidence 999885 344 8899999999999999999974 4444332222122 3458899999997 677889999887
Q ss_pred CcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeEEE
Q 014724 330 PVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLV 409 (419)
Q Consensus 330 ~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~v 409 (419)
++.+.+......... +++....+++..++. ..+.+++..+++.++++++.+.|++.|+..+..+..+.++|+
T Consensus 247 -----~~~~~~~~~~~~~~~-~~~~~~~~a~~~~l~--~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 318 (391)
T 3h14_A 247 -----DQVRVVERIAQNMFI-CAPHASQVAALAALD--CDAELQANLDVYKANRKLMLERLPKAGFTRIAPPDGAFYVYA 318 (391)
T ss_dssp -----GGHHHHHHHHHHTTC-CCCHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHHHHHHHHTCCCBCCCCBTTEEEE
T ss_pred -----HHHHHHHHHHhhhcc-CCCHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCeeEEEEE
Confidence 455555443222222 233333333333444 223457788889999999999999888765433345577888
Q ss_pred EeCC
Q 014724 410 DLRP 413 (419)
Q Consensus 410 d~~~ 413 (419)
++..
T Consensus 319 ~~~~ 322 (391)
T 3h14_A 319 DVSD 322 (391)
T ss_dssp ECTT
T ss_pred ecCc
Confidence 8864
No 43
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.91 E-value=5.7e-23 Score=202.94 Aligned_cols=271 Identities=11% Similarity=0.031 Sum_probs=189.8
Q ss_pred hhcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHH
Q 014724 102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP 179 (419)
Q Consensus 102 ~~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~ 179 (419)
.+.|+|..+++. +++.|++++.+.+... .+|+... + .+++ +++++++|+++++ .+++++|++
T Consensus 30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~--~~y~~~~---~----~~lr----~~la~~~~~~~~~---v~~~~g~~~ 93 (365)
T 3get_A 30 KEVIKLASNENPFGTPPKAIECLRQNANKA--HLYPDDS---M----IELK----STLAQKYKVQNEN---IIIGAGSDQ 93 (365)
T ss_dssp SCCEECSSCCCTTCSCHHHHHHHHHHGGGT--TSCCCTT---C----HHHH----HHHHHHHTCCGGG---EEEESSHHH
T ss_pred CceEEecCCCCCCCCCHHHHHHHHHHHHhh--ccCCCCC---h----HHHH----HHHHHHhCCCcce---EEECCCHHH
Confidence 456889888765 5899999999887532 2454321 1 2444 6778888987641 244455678
Q ss_pred HHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcC
Q 014724 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 259 (419)
Q Consensus 180 A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~ 259 (419)
|+..++.++++|||+|++.+|.|.++.. .+...|. +++.++++.+++ +|+++|++.++ .++++|++++
T Consensus 94 a~~~~~~~l~~~gd~vl~~~~~~~~~~~--------~~~~~g~--~~~~v~~~~~~~-~d~~~l~~~l~-~~~~~v~~~~ 161 (365)
T 3get_A 94 VIEFAIHSKLNSKNAFLQAGVTFAMYEI--------YAKQCGA--KCYKTQSITHNL-DEFKKLYETHK-DEIKLIFLCL 161 (365)
T ss_dssp HHHHHHHHHCCTTCEEEECSSCCTHHHH--------HHHHHTC--EEEECSSSSCCH-HHHHHHHHHTT-TTEEEEEEES
T ss_pred HHHHHHHHHhCCCCEEEEeCCChHHHHH--------HHHHcCC--EEEEEecCCCCC-CCHHHHHHHhC-CCCCEEEEcC
Confidence 9999999999999999999998766531 2234454 455555533567 99999999997 4899999988
Q ss_pred CCCCC--cCChHHHHHHHH--HhCCEEEEecccccccc--ccCCcCCCCC-----CCcEEEeCCCCcC--CCCCeeEEEE
Q 014724 260 SAYPR--DFDYPRMRQIAD--AVGALLMMDMAHISGLV--AASVVADPFK-----YCDVVTTTTHKSL--RGPRGGMIFF 326 (419)
Q Consensus 260 s~~p~--~~dl~~I~~ia~--~~ga~livD~ah~~Gl~--~~g~~~~~~~-----~~Div~~S~hK~l--~GprgG~i~~ 326 (419)
|+||+ ..+.+++.++++ ++|+++|+|++|..+.. ..+.....+. ..+++++|+||++ +|.|.|++++
T Consensus 162 p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 241 (365)
T 3get_A 162 PNNPLGECLDASEATEFIKGVNEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIA 241 (365)
T ss_dssp SCTTTCCCCCHHHHHHHHHTSCTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEEE
T ss_pred CCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcchheEEEEc
Confidence 88874 678888888887 67999999999753321 1111111111 3568899999996 6778899999
Q ss_pred eCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCccee
Q 014724 327 KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHL 406 (419)
Q Consensus 327 ~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hl 406 (419)
++ ++.+.+.....++ +++....+++..+++.. +.+++..+++.++++++.+.|++.|+++..+ ..++
T Consensus 242 ~~------~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~--~~~~ 308 (365)
T 3get_A 242 NA------NIISAFYKLRAPF---NVSNLALKAAVAAMDDD--EFTEKTLENNFSQMELYKEFAKKHNIKIIDS--YTNF 308 (365)
T ss_dssp CH------HHHHHHHHHSCTT---CSCHHHHHHHHHHHTCH--HHHHHHHHHHHHHHHHHHHHHHHTTCEECCC--SSSE
T ss_pred CH------HHHHHHHHhcCCC---CcCHHHHHHHHHHhCCH--HHHHHHHHHHHHHHHHHHHHHHhCCCEECCC--CCeE
Confidence 76 6777776544332 23444444444455432 3457888899999999999999999987653 3455
Q ss_pred EEEEeCC
Q 014724 407 VLVDLRP 413 (419)
Q Consensus 407 v~vd~~~ 413 (419)
+|+++..
T Consensus 309 ~~~~~~~ 315 (365)
T 3get_A 309 ITYFFDE 315 (365)
T ss_dssp EEEECSS
T ss_pred EEEECCC
Confidence 8998864
No 44
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.91 E-value=9.8e-23 Score=202.56 Aligned_cols=297 Identities=16% Similarity=0.156 Sum_probs=197.0
Q ss_pred hccccccChhHHHHHHHHHHHhhhcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHH
Q 014724 80 DYSLGEADPEVCEIITKEKERQFKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRA 157 (419)
Q Consensus 80 ~~~l~~~~~~~~~~~~~e~~r~~~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~l 157 (419)
++++..+++..+..+..... ....|+|..+++. .++.+++++.+.+.. ...|+.. .| ..+++ +.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~-~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~--~~~y~~~---~~---~~~l~----~~l 70 (381)
T 1v2d_A 4 HPRTEAAKESIFPRMSGLAQ-RLGAVNLGQGFPSNPPPPFLLEAVRRALGR--QDQYAPP---AG---LPALR----EAL 70 (381)
T ss_dssp CGGGGGC---CHHHHHHHHH-HHTCEECCCCSCSSCCCHHHHHHHHHHTTT--SCSCCCT---TC---CHHHH----HHH
T ss_pred hhhhhhcCccHHHHHHHHHh-cCCeEEecCCCCCCCCCHHHHHHHHHHHHH--hcCCCCC---CC---CHHHH----HHH
Confidence 34556666666655554332 3556888877653 579999999887753 2233321 11 12444 567
Q ss_pred HHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccC--CCC
Q 014724 158 LAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD--EST 235 (419)
Q Consensus 158 a~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~--~~~ 235 (419)
++++++++++ .+++++|++|+..++.++++|||+|++++|.|.++.. .+...|. +++.++.+ +++
T Consensus 71 a~~~~~~~~~---v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~--------~~~~~g~--~~~~v~~~~~~~~ 137 (381)
T 1v2d_A 71 AEEFAVEPES---VVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLP--------DAFLAGA--KARLVRLDLTPEG 137 (381)
T ss_dssp HHHHTSCGGG---EEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTC--EEEEEECEEETTE
T ss_pred HHhcCCChhh---EEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHcCC--EEEEEeCCCCCcc
Confidence 7788987642 2455567889999999999999999999998876531 2234555 44444444 345
Q ss_pred CCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cC---ChHHHHHHHHHhCCEEEEeccccccccccCCcCCCC----CCCc
Q 014724 236 GLVDYDMLEKTAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF----KYCD 306 (419)
Q Consensus 236 ~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~---dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~----~~~D 306 (419)
+.+|+++|++.+++ ++++|++++++||+ .. ++++|.++|++||++||+|++|.. +.+ +....++ .+.|
T Consensus 138 ~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~-g~~~~~~~~~~~~~~ 214 (381)
T 1v2d_A 138 FRLDLSALEKALTP-RTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDE-LYY-GERPRRLREFAPERT 214 (381)
T ss_dssp EECCHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTT-CBS-SSCCCCHHHHCTTTE
T ss_pred CCcCHHHHHHhcCc-CCEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCccc-ccc-CCCCCCHHHhcCCCE
Confidence 78999999998864 78999988888874 33 489999999999999999999753 332 2111111 2578
Q ss_pred EEEeCCCCcC--CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhc-ChHHHHHHHHHHHHH
Q 014724 307 VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ-SPEFKVYQNKVVSNC 383 (419)
Q Consensus 307 iv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~-~~~~~~~~~~v~~n~ 383 (419)
++++|+||+| +|+|.|++++++ ++.+.+......... +++....+++..+++... .+.+++..+++.+++
T Consensus 215 ~~~~s~sK~~~~~G~r~G~~~~~~------~~~~~~~~~~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 287 (381)
T 1v2d_A 215 FTVGSAGKRLEATGYRVGWIVGPK------EFMPRLAGMRQWTSF-SAPTPLQAGVAEALKLARREGFYEALREGYRRRR 287 (381)
T ss_dssp EEEEEHHHHTTCGGGCCEEEECCT------TTHHHHHHHHHHHTS-SCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred EEEeechhhcCCcccceEEEEeCH------HHHHHHHHHHhhccc-CCCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHH
Confidence 9999999987 577889999977 344444332111111 223333444455665442 345678889999999
Q ss_pred HHHHHHHHhCCcEEecCCCcceeEEEEeCC
Q 014724 384 RALASRLVELGYKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 384 ~~l~~~L~~~G~~v~~~~t~~hlv~vd~~~ 413 (419)
+++.+.|++.|+++..+ ...+++|+++..
T Consensus 288 ~~l~~~L~~~g~~~~~~-~~~~~~~~~~~~ 316 (381)
T 1v2d_A 288 DLLAGGLRAMGLRVYVP-EGTYFLMAELPG 316 (381)
T ss_dssp HHHHHHHHHTTCCEECC-SBSSEEEEECTT
T ss_pred HHHHHHHHHCCCEecCC-CcceEEEEecCh
Confidence 99999999999988753 335678888753
No 45
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.91 E-value=1.3e-22 Score=204.08 Aligned_cols=284 Identities=14% Similarity=0.126 Sum_probs=191.8
Q ss_pred hhhccccccc-CCCChHHHHHHHhhhhh--ccCCCCCCCC-CCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCC
Q 014724 101 QFKSLELIAS-ENFTSRAVMEAVGSCLT--NKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLS 176 (419)
Q Consensus 101 ~~~~i~L~~s-en~~~~~V~eal~~~l~--~~y~~g~p~~-r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~s 176 (419)
..+.+-|..+ ...+++.|++++.+.+. +.| ++|.. .+..+.. ..+..+.+++++++++|+++++ .+++++
T Consensus 20 ~~~~iyld~~~~~~~~~~v~~a~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~l~~~la~~~~~~~~~---v~~~~g 93 (423)
T 3lvm_A 20 MKLPIYLDYSATTPVDPRVAEKMMQFMTMDGTF--GNPASRSHRFGWQ-AEEAVDIARNQIADLVGADPRE---IVFTSG 93 (423)
T ss_dssp CCSSEECBTTTCCCCCHHHHHHHTTSSSTTSCC--SCTTCTTSHHHHH-HHHHHHHHHHHHHHHHTCCGGG---EEEESS
T ss_pred cCCCEeecCCCcCCCCHHHHHHHHHHHhhcccc--cCCCccccchhHH-HHHHHHHHHHHHHHHcCCCCCe---EEEeCC
Confidence 3455555543 35689999999998886 444 34433 2222222 2334445778999999998641 245566
Q ss_pred hHHHHHHHHHHccC----CCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCC
Q 014724 177 GSPANFEVYTAILK----PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRP 252 (419)
Q Consensus 177 Gt~A~~~~~~all~----pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~p 252 (419)
|++|+.+++.++.+ |||+|+++++.|.++.... ..+...|. +++.++.++ ++.+|+++|++.+++ ++
T Consensus 94 gt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~-----~~~~~~g~--~~~~v~~~~-~~~~d~~~l~~~i~~-~~ 164 (423)
T 3lvm_A 94 ATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTC-----RQLEREGF--EVTYLAPQR-NGIIDLKELEAAMRD-DT 164 (423)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHH-----HHHHHTTC--EEEEECCCT-TSCCCHHHHHHHCCT-TE
T ss_pred hHHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHH-----HHHHHcCC--EEEEeccCC-CCccCHHHHHHhcCC-Cc
Confidence 78999999988874 8999999999887653211 01122354 455555553 688999999999975 78
Q ss_pred eEEEEcCCCCC--CcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcCCCCCeeEEEEeC
Q 014724 253 KLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRGGMIFFKK 328 (419)
Q Consensus 253 klIi~~~s~~p--~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l~GprgG~i~~~~ 328 (419)
++|++++++|| ...|+++|.++|++||++||+|++|..|.. +..+. +.|++++|+||+++++..|++++++
T Consensus 165 ~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~-----~~~~~~~~~di~~~s~sK~~g~~g~G~~~~~~ 239 (423)
T 3lvm_A 165 ILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKL-----PIDLSQLKVDLMSFSGHKIYGPKGIGALYVRR 239 (423)
T ss_dssp EEEECCSBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTS-----CCCTTTSCCSEEEEESTTTTSCSSCEEEEECB
T ss_pred EEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEEhhhhcCCC-----CcChhhcCCCEEEechHHhcCCCCeEEEEEec
Confidence 99999888877 467899999999999999999999876533 11222 6799999999966433459998887
Q ss_pred CCcchhhHHHHhhhccc------CCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEEecCC
Q 014724 329 DPVLGVELESAINNAVF------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGG 401 (419)
Q Consensus 329 ~~~~~~~l~~~i~~~~~------~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~~~~ 401 (419)
+ +.+.+..... ....++++...++++..++.... ..++++.+++.+++++|.+.|++. |+++....
T Consensus 240 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 312 (423)
T 3lvm_A 240 K------PRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAK-EEMATEMERLRGLRNRLWNGIKDIEEVYLNGDL 312 (423)
T ss_dssp T------TBCCCCCSSCSSCTTTTTCCSCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTTSTTEEEESCS
T ss_pred c------ccCCCCccccCCcccccccCCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCc
Confidence 4 2222222111 11224555566666666666554 346788899999999999999887 88887532
Q ss_pred C--cceeEEEEe
Q 014724 402 S--DNHLVLVDL 411 (419)
Q Consensus 402 t--~~hlv~vd~ 411 (419)
. ..+++.+.+
T Consensus 313 ~~~~~~~~~~~~ 324 (423)
T 3lvm_A 313 EHGAPNILNVSF 324 (423)
T ss_dssp TTBCTTEEEEEE
T ss_pred cccCCCeEEEEe
Confidence 1 134566555
No 46
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.90 E-value=6.9e-23 Score=203.01 Aligned_cols=278 Identities=16% Similarity=0.093 Sum_probs=186.5
Q ss_pred hcccccccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCC-CCceeEecCChHHHH
Q 014724 103 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDEN-KWGVNVQPLSGSPAN 181 (419)
Q Consensus 103 ~~i~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~-~~~v~V~~~sGt~A~ 181 (419)
+.+.+.+++..+++.|++++.+.+.+. ++| ... ......+++++++++.... +....+++++|++|+
T Consensus 5 ~~~~~~p~p~~~~~~v~~a~~~~~~~~---~~~--------~~~-~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~t~al 72 (385)
T 2bkw_A 5 VDTLLIPGPIILSGAVQKALDVPSLGH---TSP--------EFV-SIFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGW 72 (385)
T ss_dssp CCEECSSSSCCCCHHHHHTTSCCCCCT---TSH--------HHH-HHHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHH
T ss_pred cceeecCCCcCchHHHHHHHhcccccc---CCH--------HHH-HHHHHHHHHHHHHhCCCCCCCCceEEEcCchHHHH
Confidence 457888898889999999987654321 111 111 1222345677777766420 011224556678999
Q ss_pred HHHHHHcc---CCCCEEEEeCCCCCccccCccccccccccccccccEEEeccc-CCCCCCCCHHHHHHHhhhcCCeEEEE
Q 014724 182 FEVYTAIL---KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL-DESTGLVDYDMLEKTAILFRPKLIIA 257 (419)
Q Consensus 182 ~~~~~all---~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~-~~~~~~iD~d~Le~~l~~~~pklIi~ 257 (419)
..++.++. +|||+|+++++++.+.... ..+...|. +++.+++ + +++.+|+++|++.+++.++++|++
T Consensus 73 ~~~~~~~~~~~~~gd~vlv~~~~~~~~~~~------~~~~~~g~--~~~~v~~~~-~~~~~d~~~l~~~l~~~~~~~v~~ 143 (385)
T 2bkw_A 73 DIFASNFILSKAPNKNVLVVSTGTFSDRFA------DCLRSYGA--QVDVVRPLK-IGESVPLELITEKLSQNSYGAVTV 143 (385)
T ss_dssp HHHHHHHSCTTCSCCEEEEECSSHHHHHHH------HHHHHTTC--EEEEECCSS-TTSCCCHHHHHHHHHHSCCSEEEE
T ss_pred HHHHHHHhccCCCCCeEEEEcCCcchHHHH------HHHHHcCC--ceEEEecCC-CCCCCCHHHHHHHHhcCCCCEEEE
Confidence 99999997 9999998885432111100 11233455 4455555 4 467899999999997657899999
Q ss_pred cCCCCCC--cCChHHHHHHHHHh--CCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcCCCCCe-eEEEEeCCC
Q 014724 258 GASAYPR--DFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDP 330 (419)
Q Consensus 258 ~~s~~p~--~~dl~~I~~ia~~~--ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l~Gprg-G~i~~~~~~ 330 (419)
++++||+ ..|+++|.++|++| |++||+|++|..|.. +.++. ++|++++|+||++.||.| |++++++
T Consensus 144 ~~~~nptG~~~~l~~i~~~~~~~~~~~~li~D~a~~~~~~-----~~~~~~~~~d~~~~s~~K~~~~~~G~G~~~~~~-- 216 (385)
T 2bkw_A 144 THVDTSTAVLSDLKAISQAIKQTSPETFFVVDAVCSIGCE-----EFEFDEWGVDFALTASQKAIGAPAGLSISLCSS-- 216 (385)
T ss_dssp ESEETTTTEECCHHHHHHHHHHHCTTSEEEEECTTTTTTS-----CCCTTTTTCSEEEEESSSTTCCCSCEEEEEECH--
T ss_pred EccCCCcCeEcCHHHHHHHHHhhCCCCEEEEECccccCCc-----cccccccCceEEEecCccccccCCcceEEEEcH--
Confidence 8888774 67999999999999 999999999875532 11232 579999999999988776 9999887
Q ss_pred cchhhHHH-Hhhh---------------------cccCC---CCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHH
Q 014724 331 VLGVELES-AINN---------------------AVFPG---LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRA 385 (419)
Q Consensus 331 ~~~~~l~~-~i~~---------------------~~~~~---~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~ 385 (419)
++.+ ++.. ....+ ..++++...++++..+++.+...++++..+++.+++++
T Consensus 217 ----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~ 292 (385)
T 2bkw_A 217 ----RFMDYALNDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDW 292 (385)
T ss_dssp ----HHHHHHTCHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHhhccCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHH
Confidence 3433 3310 00000 12345555666666677665433367788889999999
Q ss_pred HHHHH-HhCCcEEecC-C---CcceeEEEEeC
Q 014724 386 LASRL-VELGYKLVSG-G---SDNHLVLVDLR 412 (419)
Q Consensus 386 l~~~L-~~~G~~v~~~-~---t~~hlv~vd~~ 412 (419)
+.+.| ++.|+++..+ + ...+++++++.
T Consensus 293 l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~ 324 (385)
T 2bkw_A 293 FKDSLVNGLQLTSVSRYPSNMSAHGLTAVYVA 324 (385)
T ss_dssp HHHHHHTTTCCEESSCSSSTTBCSSCEEEECS
T ss_pred HHHHHHHhcCceecccCcccccCCceEEEecC
Confidence 99999 8889988742 1 24678888874
No 47
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.90 E-value=1.5e-22 Score=200.05 Aligned_cols=270 Identities=14% Similarity=0.067 Sum_probs=188.2
Q ss_pred hhcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCC-CCCCCceeEecCC-h
Q 014724 102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL-DENKWGVNVQPLS-G 177 (419)
Q Consensus 102 ~~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~-~~~~~~v~V~~~s-G 177 (419)
.+.|+|..+++. +++.|++++.+.+.+....+|+.. + ..++ ++++++++|+ +++ +|++++ |
T Consensus 30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~----~---~~~l----~~~la~~~g~~~~~----~i~~~~g~ 94 (367)
T 3euc_A 30 HGLVKLDAMENPYRLPPALRSELAARLGEVALNRYPVP----S---SEAL----RAKLKEVMQVPAGM----EVLLGNGS 94 (367)
T ss_dssp TTCEECCSSCCCCCCCHHHHHHHHHHHHHHHTTCSCCC----C---HHHH----HHHHHHHHTCCTTC----EEEEEEHH
T ss_pred CCeeEccCCCCCCCCCHHHHHHHHHHhhhhhhhcCCCC----c---HHHH----HHHHHHHhCCCCcc----eEEEcCCH
Confidence 356888888865 589999999888764222344431 1 2344 4678888998 442 355555 5
Q ss_pred HHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEE
Q 014724 178 SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIA 257 (419)
Q Consensus 178 t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~ 257 (419)
++|+..++.++++|||+|++.+|.|.++.. .+...|. +++.+++++ ++.+|+++|++.++++++|+|++
T Consensus 95 t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~--------~~~~~g~--~~~~v~~~~-~~~~d~~~l~~~l~~~~~~~v~~ 163 (367)
T 3euc_A 95 DEIISMLALAAARPGAKVMAPVPGFVMYAM--------SAQFAGL--EFVGVPLRA-DFTLDRGAMLAAMAEHQPAIVYL 163 (367)
T ss_dssp HHHHHHHHHHTCCTTCEEEEEESCSCCSCH--------HHHTTTC--EEEEEECCT-TSCCCHHHHHHHHHHHCCSEEEE
T ss_pred HHHHHHHHHHHcCCCCEEEEcCCCHHHHHH--------HHHHcCC--eEEEecCCC-CCCCCHHHHHHHhhccCCCEEEE
Confidence 789999999999999999999998866531 2334555 455555553 67899999999998668999999
Q ss_pred cCCCCCC--c---CChHHHHHHHHHh--CCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcC-CCCCeeEEEEe
Q 014724 258 GASAYPR--D---FDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSL-RGPRGGMIFFK 327 (419)
Q Consensus 258 ~~s~~p~--~---~dl~~I~~ia~~~--ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l-~GprgG~i~~~ 327 (419)
++++||+ . .++++|+++|++| |+++|+|++|. ++...+..+ .++ +.+++++|+||+. +|.|.|+++++
T Consensus 164 ~~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~-~~~~~~~~~-~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~ 241 (367)
T 3euc_A 164 AYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQ-PFAQESWMS-RLTDFGNLLVMRTVSKLGLAGIRLGYVAGD 241 (367)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTC-CSSSCCSGG-GGGTCTTEEEEEECCCTTSCSCCEEEEEEC
T ss_pred cCCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcch-hhcccchHH-HHhhCCCEEEEecchhhcccccCceeeeeC
Confidence 8888885 3 2578888889999 99999999974 333222111 111 3458899999973 67788999997
Q ss_pred CCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEEecCCCccee
Q 014724 328 KDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHL 406 (419)
Q Consensus 328 ~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~~~~t~~hl 406 (419)
+ ++.+.+.....++ +++....+++..+++. .+.+++..+++.++++++.+.|++. |+++.+ ...++
T Consensus 242 ~------~~~~~~~~~~~~~---~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~--~~~~~ 308 (367)
T 3euc_A 242 P------QWLEQLDKVRPPY---NVNVLTEATALFALEH--VAVLDEQAAQLRAERSRVAEGMAAHGGVTVFP--SAANF 308 (367)
T ss_dssp H------HHHHHHGGGCCSS---CCCHHHHHHHHHHHTT--HHHHHHHHHHHHHHHHHHHHHHHTSTTCEECC--CSSSE
T ss_pred H------HHHHHHHHhCCCC---CCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHhCCCcEECC--CCCeE
Confidence 6 6777776554332 2333344444445544 2345788889999999999999997 998654 34456
Q ss_pred EEEEeC
Q 014724 407 VLVDLR 412 (419)
Q Consensus 407 v~vd~~ 412 (419)
+|+++.
T Consensus 309 ~~~~~~ 314 (367)
T 3euc_A 309 LLARVP 314 (367)
T ss_dssp EEEECS
T ss_pred EEEECC
Confidence 788874
No 48
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.90 E-value=3.3e-22 Score=200.38 Aligned_cols=283 Identities=17% Similarity=0.116 Sum_probs=192.4
Q ss_pred cccccccC-CCChHHHHHHHhhhhhccCCCCCCCC-CCCCchhHHHHHHHHHHHHHHHHcCC-CCCCCceeEecCChHHH
Q 014724 104 SLELIASE-NFTSRAVMEAVGSCLTNKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNL-DENKWGVNVQPLSGSPA 180 (419)
Q Consensus 104 ~i~L~~se-n~~~~~V~eal~~~l~~~y~~g~p~~-r~~~g~~~~~~lE~~~~~~la~~~g~-~~~~~~v~V~~~sGt~A 180 (419)
.|.|..++ ...|+.|++++.+.+.+.+ +++.. .+..+......++ .+++++++++|. +++ ..+++++|++|
T Consensus 29 ~i~l~~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~y~~~~~~~~~-~l~~~la~~~~~~~~~---~v~~~~g~t~a 102 (420)
T 1t3i_A 29 LVYLDNAATSQKPRAVLEKLMHYYENDN--ANVHRGAHQLSVRATDAYE-AVRNKVAKFINARSPR---EIVYTRNATEA 102 (420)
T ss_dssp CEECBTTTCCCCCHHHHHHHHHHHHHTC--CCC--CCSHHHHHHHHHHH-HHHHHHHHHTTCSCGG---GEEEESSHHHH
T ss_pred eEEecCCccCCCCHHHHHHHHHHHHhcc--CCCCcccchHHHHHHHHHH-HHHHHHHHHcCCCCCC---eEEEcCChHHH
Confidence 46776655 3578999999998876432 22221 1111211112233 456889999998 443 22555667899
Q ss_pred HHHHHHHc----cCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEE
Q 014724 181 NFEVYTAI----LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLII 256 (419)
Q Consensus 181 ~~~~~~al----l~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi 256 (419)
+.+++.++ ++|||+|+++++.|.+.... +. ..+...|. +++.++++ +++.+|+++|++.+++ ++++|+
T Consensus 103 ~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~-~~---~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~l~~-~~~~v~ 174 (420)
T 1t3i_A 103 INLVAYSWGMNNLKAGDEIITTVMEHHSNLVP-WQ---MVAAKTGA--VLKFVQLD-EQESFDLEHFKTLLSE-KTKLVT 174 (420)
T ss_dssp HHHHHHHTHHHHCCTTCEEEEETTCCGGGTHH-HH---HHHHHHCC--EEEEECBC-TTSSBCHHHHHHHCCT-TEEEEE
T ss_pred HHHHHHHhhhcccCCCCEEEECcchhHHHHHH-HH---HHHHhcCc--EEEEeccC-CCCCcCHHHHHHhhCC-CceEEE
Confidence 99999999 99999999999988774210 00 01123354 44555555 4678999999999975 789999
Q ss_pred EcCCCCC--CcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcCCCCC-eeEEEEeCCCc
Q 014724 257 AGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPR-GGMIFFKKDPV 331 (419)
Q Consensus 257 ~~~s~~p--~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l~Gpr-gG~i~~~~~~~ 331 (419)
+++++|| ...|+++|.++|++||++||+|++|..|.. +..+. +.|++++|+||.+ ||. +|+++.++
T Consensus 175 ~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~-----~~~~~~~~~di~~~s~sK~~-~~~g~G~~~~~~--- 245 (420)
T 1t3i_A 175 VVHISNTLGCVNPAEEIAQLAHQAGAKVLVDACQSAPHY-----PLDVQLIDCDWLVASGHKMC-APTGIGFLYGKE--- 245 (420)
T ss_dssp EESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTS-----CCCHHHHTCSEEEEEGGGTT-SCTTCEEEEECH---
T ss_pred EeCCcccccCcCCHHHHHHHHHHcCCEEEEEhhhccCCc-----cCchhhcCCCEEEEehhhhc-CCCceEEEEEch---
Confidence 9988876 467899999999999999999999876532 11121 6899999999965 554 59999887
Q ss_pred chhhHHHHhhhcccCC--------------------CCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHH
Q 014724 332 LGVELESAINNAVFPG--------------------LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLV 391 (419)
Q Consensus 332 ~~~~l~~~i~~~~~~~--------------------~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~ 391 (419)
++.+++......+ ..+++.....+++..+++.+...++++..+++.++++++.+.|+
T Consensus 246 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~ 322 (420)
T 1t3i_A 246 ---EILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVELTHYLWQGLG 322 (420)
T ss_dssp ---HHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred ---HHHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 6777665432211 12455555566655566655433467788889999999999999
Q ss_pred hC-CcEEecCC----CcceeEEEEeC
Q 014724 392 EL-GYKLVSGG----SDNHLVLVDLR 412 (419)
Q Consensus 392 ~~-G~~v~~~~----t~~hlv~vd~~ 412 (419)
+. |+++.... ...+++++++.
T Consensus 323 ~~~g~~~~~~~~~~~~~~~~~~~~~~ 348 (420)
T 1t3i_A 323 QIPQLRLYGPNPKHGDRAALASFNVA 348 (420)
T ss_dssp TCTTEEEESCCGGGSCBCSEEEEEET
T ss_pred hCCCeEEeCCCccccccCCEEEEEEC
Confidence 97 89887532 13567777765
No 49
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.90 E-value=3.8e-22 Score=196.85 Aligned_cols=269 Identities=16% Similarity=0.096 Sum_probs=188.5
Q ss_pred hhcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHH
Q 014724 102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP 179 (419)
Q Consensus 102 ~~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~ 179 (419)
.+.|+|..++++ +++.|++++.+.+... .+||. ....++ ++++++++|+++++ .+++++|++
T Consensus 32 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~--~~y~~-------~~~~~l----r~~la~~~~~~~~~---v~~~~g~t~ 95 (363)
T 3ffh_A 32 TKITKLSSNENPLGTSKKVAAIQANSSVET--EIYPD-------GWASSL----RKEVADFYQLEEEE---LIFTAGVDE 95 (363)
T ss_dssp SCCEECSSCSCTTCCCHHHHHHHHTCBSCC--CBC-----------CHHH----HHHHHHHHTCCGGG---EEEESSHHH
T ss_pred CceEEccCCCCCCCCCHHHHHHHHHHHHHh--hcCCC-------cchHHH----HHHHHHHhCCChhh---EEEeCCHHH
Confidence 456889888765 5899999998876431 23432 111233 46788889987641 244555678
Q ss_pred HHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcC
Q 014724 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 259 (419)
Q Consensus 180 A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~ 259 (419)
|+..++.+++++||+|++++|.|.++.. .+...|. +++.+++++ ++.+|++++++.+++ ++++|++++
T Consensus 96 a~~~~~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~--~~~~v~~~~-~~~~d~~~l~~~i~~-~~~~v~~~~ 163 (363)
T 3ffh_A 96 LIELLTRVLLDTTTNTVMATPTFVQYRQ--------NALIEGA--EVREIPLLQ-DGEHDLEGMLNAIDE-KTTIVWICN 163 (363)
T ss_dssp HHHHHHHHHCSTTCEEEEEESSCHHHHH--------HHHHHTC--EEEEEECCT-TSCCCHHHHHHHCCT-TEEEEEEES
T ss_pred HHHHHHHHHccCCCEEEEcCCChHHHHH--------HHHHcCC--EEEEecCCC-CCCcCHHHHHHhccc-CCCEEEEeC
Confidence 9999999999999999999988765431 2234455 455555553 688999999999975 789999998
Q ss_pred CCCCC--cCChHHHHHHHHHh--CCEEEEeccccccccccCCcCCCCC-----CCcEEEeCCCCcC--CCCCeeEEEEeC
Q 014724 260 SAYPR--DFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFK-----YCDVVTTTTHKSL--RGPRGGMIFFKK 328 (419)
Q Consensus 260 s~~p~--~~dl~~I~~ia~~~--ga~livD~ah~~Gl~~~g~~~~~~~-----~~Div~~S~hK~l--~GprgG~i~~~~ 328 (419)
++||+ ..|.+++.++++.+ |+++|+|++|. ++.. +.....+. ..+++++|+||++ +|.|.|++++++
T Consensus 164 p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~-~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~ 241 (363)
T 3ffh_A 164 PNNPTGNYIELADIQAFLDRVPSDVLVVLDEAYI-EYVT-PQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIADK 241 (363)
T ss_dssp SCTTTCCCCCHHHHHHHHTTSCTTSEEEEECTTG-GGCS-SCCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEECH
T ss_pred CCCCcCCCcCHHHHHHHHHhCCCCcEEEEeCchH-hhcC-ccccCHHHHhhcCCCEEEEeechhhhcCchhceeeeecCH
Confidence 88874 67889999998877 99999999975 3333 22222221 2348899999987 577889999976
Q ss_pred CCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHh-CCcEEecCCCcceeE
Q 014724 329 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-LGYKLVSGGSDNHLV 407 (419)
Q Consensus 329 ~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~-~G~~v~~~~t~~hlv 407 (419)
++.+.+.....++ +++....+++..+++.. ..+++..+++.++++++.+.|++ .|+++.++ ..+++
T Consensus 242 ------~~~~~l~~~~~~~---~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~--~~~~~ 308 (363)
T 3ffh_A 242 ------EIIRQLNIVRPPF---NTTSIGQKLAIEAIKDQ--AFIGECRTSNANGIKQYEAFAKRFEKVKLYPA--NGNFV 308 (363)
T ss_dssp ------HHHHHHHHTCCSC---CCBHHHHHHHHHHHHCH--HHHHHHHHHHHHHHHHHHHHHHHCTTCEECCC--CSSEE
T ss_pred ------HHHHHHHHhCCCC---CCCHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHHHHHhhCCCceECCC--CCeEE
Confidence 6777776544332 33444444444455432 34578888899999999999999 79988753 34568
Q ss_pred EEEeCC
Q 014724 408 LVDLRP 413 (419)
Q Consensus 408 ~vd~~~ 413 (419)
|+++..
T Consensus 309 ~~~~~~ 314 (363)
T 3ffh_A 309 LIDLGI 314 (363)
T ss_dssp EEECSS
T ss_pred EEECCC
Confidence 888753
No 50
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.90 E-value=8.6e-23 Score=205.23 Aligned_cols=291 Identities=15% Similarity=0.163 Sum_probs=194.2
Q ss_pred cccChhHHHHHHHHHHHh----hh-------------cccccccCCC----ChHHHHHHHhhhhhccCCCCCCCCCCCCc
Q 014724 84 GEADPEVCEIITKEKERQ----FK-------------SLELIASENF----TSRAVMEAVGSCLTNKYSEGLPGKRYYGG 142 (419)
Q Consensus 84 ~~~~~~~~~~~~~e~~r~----~~-------------~i~L~~sen~----~~~~V~eal~~~l~~~y~~g~p~~r~~~g 142 (419)
+.+++.++..+++.+.+. .. .|++. ++++ .+|.|++++.+.+. +|..++.+.+...|
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ld~~-s~~~l~~~~~p~v~~a~~~~l~-~~~~~~~~~~~~~g 101 (409)
T 3kki_A 24 PQLPDFIQNKIDHYIENYFDINKNGKHLVLGKQASPDDIILQ-SNDYLALANHPLIKARLAKSLL-EEQQSLFMSASFLQ 101 (409)
T ss_dssp CCCCHHHHHHHHHHHHHHTTTSTTSSCTTCCCCCCTTSEECC-CSCTTCCTTCHHHHHHHHHHHH-SCCCCCCSBGGGGC
T ss_pred ccchHHHHHHHHHHHHHHhhhccCCCeeeeCCCCCCceEEee-ccCccCCcCCHHHHHHHHHHHH-HcCCCCCccccccC
Confidence 467788888776554332 11 13333 3343 37999999998885 44333333322223
Q ss_pred h-hHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccc
Q 014724 143 N-EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (419)
Q Consensus 143 ~-~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g 221 (419)
. +...++ ++++++++|.+. .+++++|++|+..++.++++|||.|++.++.|+++.. .+...|
T Consensus 102 ~~~~~~~l----~~~la~~~g~~~-----~i~~~sGt~a~~~~l~~~~~~gd~Vl~~~~~~~~~~~--------~~~~~g 164 (409)
T 3kki_A 102 NDYDKPMI----EKRLAKFTGFDE-----CLLSQSGWNANVGLLQTICQPNTNVYIDFFAHMSLWE--------GARYAN 164 (409)
T ss_dssp STTTSCHH----HHHHHHHHTCSE-----EEEESCHHHHHHHHHHHHCCTTCEEEEETTSCHHHHH--------HHHHTT
T ss_pred CcHHHHHH----HHHHHHHhCCCe-----EEEecchHHHHHHHHHHhcCCCCEEEECCCcCHHHHH--------HHHHcC
Confidence 2 222334 467888899875 3778999999999999999999999999998876542 223445
Q ss_pred cccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CcCChHHHHHHHHHhCCEEEEecccccccccc-CC-
Q 014724 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAA-SV- 297 (419)
Q Consensus 222 ~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p--~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~-g~- 297 (419)
. ++++++ .+|+++|++.+++.++++|++++++|| ...++++|+++|++||++||+|++|..|.... +.
T Consensus 165 ~--~~~~~~------~~d~~~le~~l~~~~~~~vi~~~~~nptG~~~~l~~l~~la~~~~~~li~De~~~~g~~g~~g~~ 236 (409)
T 3kki_A 165 A--QAHPFM------HNNCDHLRMLIQRHGPGIIVVDSIYSTLGTIAPLAELVNISKEFGCALLVDESHSLGTHGPNGAG 236 (409)
T ss_dssp C--EEEEEC------TTCHHHHHHHHHHHCSCEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCC
T ss_pred C--eEEEec------CCCHHHHHHHHHhcCCeEEEECCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCCCCc
Confidence 4 455543 278999999998767899999988876 46789999999999999999999986554321 11
Q ss_pred -c-CCCC-CCCcEEEeCCCCcCCCCCeeEEEEeCCCcchhhHHHHhhhcccCC-CCCCChHHHHHHHHHHHHHhcChHHH
Q 014724 298 -V-ADPF-KYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPG-LQGGPHNHTIGGLAVCLKHAQSPEFK 373 (419)
Q Consensus 298 -~-~~~~-~~~Div~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~-~~g~p~~~~iaala~al~~~~~~~~~ 373 (419)
. ...+ +..|++++|+||+|.++ ||+++++++ +.+.+.....+. ..++++...++++..+++... +.+
T Consensus 237 ~~~~~~~~~~~di~~~s~sK~~~~~-gg~v~~~~~------~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~--~~~ 307 (409)
T 3kki_A 237 LLAELGLTREVHFMTASLAKTFAYR-AGAIWCNNE------VNRCVPFISYPAIFSSTLLPYEAAGLETTLEIIE--SAD 307 (409)
T ss_dssp HHHHHTCGGGCSEEEEESSSTTCSS-CEEEEESSS------GGGTHHHHCHHHHHSBCCCHHHHHHHHHHHHHHH--HCH
T ss_pred chhhcCCCCCCCEEEeecchhhCCC-ceEEEECHH------HHHHHHHhCcCccccCCCcHHHHHHHHHHHHHHh--cCH
Confidence 0 0011 15789999999999665 899999884 322222211111 011233334445445665543 225
Q ss_pred HHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeEEEEeCC
Q 014724 374 VYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 374 ~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~vd~~~ 413 (419)
++.+++.+++++|.+.|++.|+++.. ..+++|+++..
T Consensus 308 ~~~~~~~~~~~~l~~~L~~~g~~~~~---~~~~~~~~~~~ 344 (409)
T 3kki_A 308 NRRQHLDRMARKLRIGLSQLGLTIRS---ESQIIGLETGD 344 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCCCCC---SSSEEEEEEES
T ss_pred HHHHHHHHHHHHHHHHHHHcCCccCC---CCCEEEEEeCC
Confidence 67788889999999999999988762 56778887753
No 51
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.90 E-value=7.9e-23 Score=205.69 Aligned_cols=304 Identities=15% Similarity=0.105 Sum_probs=188.5
Q ss_pred hccccccChhHHHHHHHHHHH----hhhcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHH
Q 014724 80 DYSLGEADPEVCEIITKEKER----QFKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLC 153 (419)
Q Consensus 80 ~~~l~~~~~~~~~~~~~e~~r----~~~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~ 153 (419)
++++.++++..+..+.....+ ..+.|+|..+++. .++.|++++.+.+......+|+.. .| ..++++.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~---~g---~~~l~~~i 84 (412)
T 2x5d_A 11 FARIDRLPPYVFNITAELKMAARRRGEDIIDLSMGNPDGPTPPHIVEKLCTVAQREDTHGYSTS---RG---IPRLRRAI 84 (412)
T ss_dssp ----------CHHHHHHHHHHHHHTTCCCEECSSCCCCSCCCHHHHHHHHHTC---------CT---TC---CHHHHHHH
T ss_pred hHHHhhcCchHHHHHHHHHHHHhhcCCCEEecCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCC---CC---cHHHHHHH
Confidence 344455555544433332221 1345888877753 579999999887754212234321 12 23677666
Q ss_pred HHHHHHHcCCCCC--CCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEeccc
Q 014724 154 QKRALAAFNLDEN--KWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 231 (419)
Q Consensus 154 ~~~la~~~g~~~~--~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~ 231 (419)
.+++.+.+|.+.+ +. .+++++|++|+..++.++++|||+|++.+|.|.++.. .+...|. +++.++.
T Consensus 85 a~~~~~~~g~~~~~~~~--v~~t~g~~~a~~~~~~~~~~~gd~Vl~~~p~~~~~~~--------~~~~~g~--~~~~~~~ 152 (412)
T 2x5d_A 85 SHWYRDRYDVQIDPESE--AIVTIGSKEGLAHLMLATLDHGDTILVPNPSYPIHIY--------GAVIAGA--QVRSVPL 152 (412)
T ss_dssp HHHHHHHHCCCCCTTTS--EEEESCHHHHHHHHHHHHCCTTCEEEEEESCCHHHHH--------HHHHHTC--EEEEEEC
T ss_pred HHHHHHHhCCCCCCCcC--EEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHcCC--EEEEeec
Confidence 6777776786321 11 2455566889999999999999999999998876532 1233454 4445555
Q ss_pred CCC-CCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cC---ChHHHHHHHHHhCCEEEEeccccccccccCC-cCC--CC
Q 014724 232 DES-TGLVDYDMLEKTAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASV-VAD--PF 302 (419)
Q Consensus 232 ~~~-~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~---dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~-~~~--~~ 302 (419)
+++ ++.+|+++|++.+. .++++|++++|+||+ .. ++++|+++|++||++||+|++|..+ .+.+. ..+ .+
T Consensus 153 ~~~~~~~~d~~~l~~~i~-~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~-~~~g~~~~~~~~~ 230 (412)
T 2x5d_A 153 VPGIDFFNELERAIRESI-PKPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADI-VYDGWKAPSIMQV 230 (412)
T ss_dssp STTSCHHHHHHHHHHTEE-SCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTC-BCTTCCCCCGGGS
T ss_pred CCccCCCCCHHHHHHhcc-cCceEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCCCCCCChhhc
Confidence 543 33589999999887 478999998888885 33 4688999999999999999997543 33221 111 12
Q ss_pred C---CCcEEEeCCCCcC--CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHH
Q 014724 303 K---YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQN 377 (419)
Q Consensus 303 ~---~~Div~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~ 377 (419)
+ +.+++++|+||+| +|+|.|++++++ ++.+.+......... +++....+++..+++.. ...+++..+
T Consensus 231 ~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~------~~~~~l~~~~~~~~~-~~~~~~~~a~~~~l~~~-~~~~~~~~~ 302 (412)
T 2x5d_A 231 PGAKDIAVEFFTLSKSYNMAGWRIGFMVGNP------ELVSALARIKSYHDY-GTFTPLQVAAIAALEGD-QQCVRDIAR 302 (412)
T ss_dssp TTGGGTEEEEEECC-CCSCTTSCCEEEEECH------HHHHHHHHHHHHHCC-CCCHHHHHHHHHHHHSC-SHHHHHHHH
T ss_pred cCccCcEEEEecCccccCCcccceEEEEcCH------HHHHHHHHHHhhhcc-CCCHHHHHHHHHHHhCC-HHHHHHHHH
Confidence 1 4578999999998 577889999976 566665443221112 22333334444455432 344677888
Q ss_pred HHHHHHHHHHHHHHhCCcEEecCCCcceeEEEEeC
Q 014724 378 KVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 378 ~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~vd~~ 412 (419)
++.++++++.+.|++.|+++..+ ..++++|+++.
T Consensus 303 ~~~~~~~~l~~~L~~~g~~~~~~-~~g~~~~~~~~ 336 (412)
T 2x5d_A 303 QYQQRRDVLVKGLREAGWMVENP-KASMYVWAKIP 336 (412)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCCC-SBSSEEEEECC
T ss_pred HHHHHHHHHHHHHHHCCCEecCC-CeeeEEEEEcC
Confidence 89999999999999888887642 34567888884
No 52
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.90 E-value=1.3e-22 Score=201.67 Aligned_cols=280 Identities=13% Similarity=0.102 Sum_probs=193.2
Q ss_pred hhcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcC--CCCCCCceeEecCCh
Q 014724 102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN--LDENKWGVNVQPLSG 177 (419)
Q Consensus 102 ~~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g--~~~~~~~v~V~~~sG 177 (419)
.+.|+|..+++. .++.|++++.+.+.+. ..+|+. +. .++++.+++++++.+| ++++ ..+++++|
T Consensus 32 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~-----~~---~~~~~~l~~~l~~~~g~~~~~~---~v~~~~g~ 99 (391)
T 4dq6_A 32 NDLLPMWVADMDFKAAPCIIDSLKNRLEQE-IYGYTT-----RP---DSYNESIVNWLYRRHNWKIKSE---WLIYSPGV 99 (391)
T ss_dssp SCSEECCSSSCSSCCCHHHHHHHHHHHTTC-CCCCBC-----CC---HHHHHHHHHHHHHHHCCCCCGG---GEEEESCH
T ss_pred CCceeccccCCCCCCCHHHHHHHHHHHhCC-CCCCCC-----CC---HHHHHHHHHHHHHHhCCCCcHH---HeEEcCCh
Confidence 456888877753 5799999999887542 223321 11 3566677789999999 4443 12444556
Q ss_pred HHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccC---CCCCCCCHHHHHHHhhhcCCeE
Q 014724 178 SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD---ESTGLVDYDMLEKTAILFRPKL 254 (419)
Q Consensus 178 t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~---~~~~~iD~d~Le~~l~~~~pkl 254 (419)
++|+..++.++++|||+|++..|.|.++.. .+...|. +++.++++ ..++.+|+++|++.+++ +++
T Consensus 100 ~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~~~d~~~l~~~l~~--~~~ 167 (391)
T 4dq6_A 100 IPAISLLINELTKANDKIMIQEPVYSPFNS--------VVKNNNR--ELIISPLQKLENGNYIMDYEDIENKIKD--VKL 167 (391)
T ss_dssp HHHHHHHHHHHSCTTCEEEECSSCCTHHHH--------HHHHTTC--EEEECCCEECTTSCEECCHHHHHHHCTT--EEE
T ss_pred HHHHHHHHHHhCCCCCEEEEcCCCCHHHHH--------HHHHcCC--eEEeeeeeecCCCceEeeHHHHHHHhhc--CCE
Confidence 789999999999999999999998877532 2234555 45555554 23456999999999975 899
Q ss_pred EEEcCCCCCC--c---CChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--CC-----cEEEeCCCCcC--CCCC
Q 014724 255 IIAGASAYPR--D---FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YC-----DVVTTTTHKSL--RGPR 320 (419)
Q Consensus 255 Ii~~~s~~p~--~---~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~-----Div~~S~hK~l--~Gpr 320 (419)
|++++++||+ . .++++|+++|++||++||+|++|. ++...+....++. .. .++++|+||++ +|.|
T Consensus 168 v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r 246 (391)
T 4dq6_A 168 FILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHS-DIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQ 246 (391)
T ss_dssp EEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTT-TCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHHTCGGGC
T ss_pred EEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEeecccc-ccccCCCCccCHHHcCccccCcEEEEEechhhccCcccc
Confidence 9998898884 3 468899999999999999999974 4443332222222 12 28899999987 6778
Q ss_pred eeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC--CcEEe
Q 014724 321 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLV 398 (419)
Q Consensus 321 gG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~--G~~v~ 398 (419)
.|+++++++ ++.+.+.........++++....+++..++... ....++..+++.++++++.+.|++. |+++.
T Consensus 247 ~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 320 (391)
T 4dq6_A 247 SSYVVLPDE-----KDYKLLDDAFTRIDIKRNNCFSLVATEASYNNG-ESWLESFLEYLESNIDFAIKYINENMPKLKVR 320 (391)
T ss_dssp CEEEECCSH-----HHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEC
T ss_pred eEEEEeCCH-----HHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhch-HHHHHHHHHHHHHHHHHHHHHHHhhCCCCEec
Confidence 899998763 566665543222223344444455555556552 2335778888999999999999883 88887
Q ss_pred cCCCcceeEEEEeCC
Q 014724 399 SGGSDNHLVLVDLRP 413 (419)
Q Consensus 399 ~~~t~~hlv~vd~~~ 413 (419)
.+ ..+.++|+++..
T Consensus 321 ~~-~~~~~~~~~~~~ 334 (391)
T 4dq6_A 321 KP-EGTYLLWVDFSA 334 (391)
T ss_dssp CC-SBSSEEEEECGG
T ss_pred CC-CccEEEEEEhhh
Confidence 53 445667788864
No 53
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.90 E-value=5.1e-22 Score=205.90 Aligned_cols=279 Identities=13% Similarity=0.029 Sum_probs=192.6
Q ss_pred CCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCC--CCCCceeEecCChHHHHHHHHHHcc
Q 014724 112 NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD--ENKWGVNVQPLSGSPANFEVYTAIL 189 (419)
Q Consensus 112 n~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~--~~~~~v~V~~~sGt~A~~~~~~all 189 (419)
.++++.+.+++.+.+...+. ++ .......++|+.+++++++++|++ +++....+.+++|++||+.++.++.
T Consensus 66 ~~~~~~v~~~l~~~~~~~~~--~~-----~~~p~~~~le~~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~~~a~~a~~ 138 (502)
T 3hbx_A 66 TWMEPECDKLIMSSINKNYV--DM-----DEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFK 138 (502)
T ss_dssp CCCCHHHHHHHHHTTTCBTT--CT-----TTCHHHHHHHHHHHHHHHHHTTCCCCSSCCCEEEEESSHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhccCCC--Ch-----hcChhHHHHHHHHHHHHHHHhCCCcccccCCcceecCcHHHHHHHHHHHHH
Confidence 45689999999888754332 11 112346789989999999999998 4332233456788999999988886
Q ss_pred CC--------CC-----EEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEE
Q 014724 190 KP--------HD-----RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLII 256 (419)
Q Consensus 190 ~p--------GD-----~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi 256 (419)
++ || +|+++++.|.++. +.+...|..+. .++++++++.+|+++|++.+.+ +|++|+
T Consensus 139 ~~~~~~~~~~G~~~~~~~vi~~~~~h~s~~--------~~~~~~G~~~~--~v~~~~~~~~~d~~~l~~~i~~-~t~~v~ 207 (502)
T 3hbx_A 139 RKWQNKRKAEGKPVDKPNIVTGANVQVCWE--------KFARYFEVELK--EVKLSEGYYVMDPQQAVDMVDE-NTICVA 207 (502)
T ss_dssp HHHHHHHHHTTCCCSCCEEEEETTCCHHHH--------HHHHHTTCEEE--EECCBTTBCSCCHHHHHHHCCT-TEEEEE
T ss_pred HHHhHHHHhcCCCCCCcEEEEcCCchHHHH--------HHHHHcCceeE--EEecCCCcCcCCHHHHHHHHhh-CCEEEE
Confidence 65 87 8999988765532 12345666444 4445544589999999999975 788888
Q ss_pred EcCCCCC--CcCChHHHHHHHHHh------CCEEEEecccccccc--ccCCcCCCC--CCCcEEEeCCCCcCCCCC-eeE
Q 014724 257 AGASAYP--RDFDYPRMRQIADAV------GALLMMDMAHISGLV--AASVVADPF--KYCDVVTTTTHKSLRGPR-GGM 323 (419)
Q Consensus 257 ~~~s~~p--~~~dl~~I~~ia~~~------ga~livD~ah~~Gl~--~~g~~~~~~--~~~Div~~S~hK~l~Gpr-gG~ 323 (419)
+..++|+ ...|+++|.++|+++ |++|++|+||..+.. ..+..+..+ .++|++++++||++.+|. .|+
T Consensus 208 ~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~~~~~D~v~~s~hK~l~~p~g~G~ 287 (502)
T 3hbx_A 208 AILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGW 287 (502)
T ss_dssp EEBSCTTTCCBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTCCCSSCEE
T ss_pred EecCCCCCCcccCHHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCcccccccCCCCceEEEECcccccCCCCCeEE
Confidence 8777766 467999999999999 999999999864432 112222222 378999999999986665 488
Q ss_pred EEEeCCCcchhhHH-HHhhhc-cc-------CCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCC
Q 014724 324 IFFKKDPVLGVELE-SAINNA-VF-------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG 394 (419)
Q Consensus 324 i~~~~~~~~~~~l~-~~i~~~-~~-------~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G 394 (419)
++++++ ++. +.+... .+ ..+.++.....++++..++..+..+++.++.++..+++++|++.|++.|
T Consensus 288 ~~~~~~-----~~l~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~ 362 (502)
T 3hbx_A 288 VIWRNK-----EDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGHEGYRNVMENCRENMIVLREGLEKTE 362 (502)
T ss_dssp EEESSG-----GGSCGGGCEEECSSSSCEEECCSCCSCBSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred EEEeCH-----HHhhHHhccCcccccCCCCCccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 887763 221 111100 00 1112333333455555566665556678889999999999999999985
Q ss_pred -cEEecCCCcceeEEEEeCC
Q 014724 395 -YKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 395 -~~v~~~~t~~hlv~vd~~~ 413 (419)
++++......+++.+++.+
T Consensus 363 ~~~~~~~~~~~~~v~f~~~~ 382 (502)
T 3hbx_A 363 RFNIVSKDEGVPLVAFSLKD 382 (502)
T ss_dssp CEEECSCSSSSSEEEEEESS
T ss_pred CEEEEeCCCCceEEEEEecC
Confidence 9887643567888888754
No 54
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.90 E-value=2.7e-22 Score=199.72 Aligned_cols=281 Identities=13% Similarity=0.059 Sum_probs=189.7
Q ss_pred hhcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCC-hH
Q 014724 102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLS-GS 178 (419)
Q Consensus 102 ~~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~s-Gt 178 (419)
++.|+|..+++. .++.+++++.+.+.+. ..+|+.. .| ..++++.+.+++.+.+|++.+. .+|++++ |+
T Consensus 30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~---~g---~~~l~~~la~~~~~~~g~~~~~--~~v~~~~g~~ 100 (388)
T 1j32_A 30 IDVCSFSAGEPDFNTPKHIVEAAKAALEQG-KTRYGPA---AG---EPRLREAIAQKLQRDNGLCYGA--DNILVTNGGK 100 (388)
T ss_dssp CCCEECCCSSCSSCCCHHHHHHHHHHHHTT-CCSCCCT---TC---CHHHHHHHHHHHHHHHCCCCCG--GGEEEESHHH
T ss_pred CCEEECCCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCC---CC---CHHHHHHHHHHHHHhcCCCCCh--hhEEEcCCHH
Confidence 456888877753 5799999998877542 1234321 12 2467777778888888864321 1355555 57
Q ss_pred HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCC-CCCCCCHHHHHHHhhhcCCeEEEE
Q 014724 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKLIIA 257 (419)
Q Consensus 179 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~-~~~~iD~d~Le~~l~~~~pklIi~ 257 (419)
+|+..++.++++|||+|++.+|.|.++.. .+...|. +++.++.++ +++.+|+++|++.+++ ++++|++
T Consensus 101 ~a~~~~~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~v~~ 169 (388)
T 1j32_A 101 QSIFNLMLAMIEPGDEVIIPAPFWVSYPE--------MVKLAEG--TPVILPTTVETQFKVSPEQIRQAITP-KTKLLVF 169 (388)
T ss_dssp HHHHHHHHHHCCTTCEEEEESSCCTHHHH--------HHHHTTC--EEEEECCCGGGTTCCCHHHHHHHCCT-TEEEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEcCCCChhHHH--------HHHHcCC--EEEEecCCcccCCCCCHHHHHHhcCc-CceEEEE
Confidence 89999999999999999999998876531 2234555 444444443 2467999999999875 7899998
Q ss_pred cCCCCCC--c---CChHHHHHHHHHhCCEEEEeccccccccccCC-cCCC--CC----CCcEEEeCCCCcC--CCCCeeE
Q 014724 258 GASAYPR--D---FDYPRMRQIADAVGALLMMDMAHISGLVAASV-VADP--FK----YCDVVTTTTHKSL--RGPRGGM 323 (419)
Q Consensus 258 ~~s~~p~--~---~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~-~~~~--~~----~~Div~~S~hK~l--~GprgG~ 323 (419)
++++||+ . .++++|+++|++||+++|+|++|. ++.+.+. ..+. ++ +.|++++|+||+| +|+|.|+
T Consensus 170 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~ 248 (388)
T 1j32_A 170 NTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYE-KILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGF 248 (388)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTT-TCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCCEE
T ss_pred eCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccch-hcccCCCCCCCHHHccccccCCEEEEeechhccCCcccceEE
Confidence 8888874 3 258999999999999999999975 3333321 1111 11 3679999999997 5678899
Q ss_pred EEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEEecCCC
Q 014724 324 IFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGS 402 (419)
Q Consensus 324 i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~~~~t 402 (419)
+++++ ++.+.+......+..+.+... ..+...++... .+.+++..+++.++++++.+.|++. |+++..+ .
T Consensus 249 ~~~~~------~~~~~l~~~~~~~~~~~~~~~-~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~-~ 319 (388)
T 1j32_A 249 LAGPV------PLVKAATKIQGHSTSNVCTFA-QYGAIAAYENS-QDCVQEMLAAFAERRRYMLDALNAMPGLECPKP-D 319 (388)
T ss_dssp EECCH------HHHHHHHHHHHTTTCSCCHHH-HHHHHHHHHSC-SHHHHHHHHHHHHHHHHHHHHHHTCTTCBCCCC-C
T ss_pred EEeCH------HHHHHHHHHHhhcccCCCHHH-HHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCC-C
Confidence 99887 566666543333323333322 22223345432 3446778888999999999999987 8887643 3
Q ss_pred cceeEEEEeC
Q 014724 403 DNHLVLVDLR 412 (419)
Q Consensus 403 ~~hlv~vd~~ 412 (419)
.+.++|+++.
T Consensus 320 ~~~~~~~~~~ 329 (388)
T 1j32_A 320 GAFYMFPSIA 329 (388)
T ss_dssp BTTEECCBCG
T ss_pred eeEEEEEecC
Confidence 3556777764
No 55
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.90 E-value=5.2e-23 Score=203.05 Aligned_cols=274 Identities=12% Similarity=0.047 Sum_probs=180.3
Q ss_pred cccccc--cCCCChHHHHHHHhhhhhccCCCCCC--CCCCCCchhHHHHHHHHHHHH-HHHHcCCCCCCCceeEecCChH
Q 014724 104 SLELIA--SENFTSRAVMEAVGSCLTNKYSEGLP--GKRYYGGNEYIDELETLCQKR-ALAAFNLDENKWGVNVQPLSGS 178 (419)
Q Consensus 104 ~i~L~~--sen~~~~~V~eal~~~l~~~y~~g~p--~~r~~~g~~~~~~lE~~~~~~-la~~~g~~~~~~~v~V~~~sGt 178 (419)
.+.|.. +...+++.|++++.+.+......++. ....+...+...+ ++++ +++++|.+ . + +++++|+
T Consensus 9 ~i~ld~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l~~~~la~~~~~~-~---v-~~~~g~t 79 (371)
T 2e7j_A 9 FINIDPLQTGGKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHD----FIHNQLPKFLGCD-V---A-RVTNGAR 79 (371)
T ss_dssp CEECCHHHHTCCCCHHHHHHHHHC--------------------CCHHH----HHHTHHHHHTTSS-E---E-EEESSHH
T ss_pred cEEecccccCCCCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHH----HHHHHHHHHcCCC-E---E-EEeCChH
Confidence 344544 34567899999998877543211111 0000111122233 4477 88999986 2 2 3444457
Q ss_pred HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecc--cCCCCCCCCHHHHHHHhhh----cCC
Q 014724 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR--LDESTGLVDYDMLEKTAIL----FRP 252 (419)
Q Consensus 179 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~--~~~~~~~iD~d~Le~~l~~----~~p 252 (419)
+|+..++.++++|||+|+++++.|.++.. .+...|. +++.++ .+ +++.+|+++|++.+++ .++
T Consensus 80 ~a~~~~~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~--~~~~v~~~~~-~~~~~d~~~l~~~l~~~~~~~~~ 148 (371)
T 2e7j_A 80 EAKFAVMHSLAKKDAWVVMDENCHYSSYV--------AAERAGL--NIALVPKTDY-PDYAITPENFAQTIEETKKRGEV 148 (371)
T ss_dssp HHHHHHHHHHCCTTCEEEEETTCCHHHHH--------HHHHTTC--EEEEECCCCT-TTCCCCHHHHHHHHHHHTTTSCE
T ss_pred HHHHHHHHHHhCCCCEEEEccCcchHHHH--------HHHHcCC--eEEEeecccC-CCCCcCHHHHHHHHHhhcccCCe
Confidence 89999999999999999999998876542 2334565 444444 54 3578999999999974 378
Q ss_pred eEEEEcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcCCCC-CeeEEEEe
Q 014724 253 KLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGP-RGGMIFFK 327 (419)
Q Consensus 253 klIi~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l~Gp-rgG~i~~~ 327 (419)
++|++++++||+ ..|+++|.++|++||++||+|++|..|.. +..+. +.|++++|+||+|.+| ++|+++++
T Consensus 149 ~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~-----~~~~~~~~~di~~~s~sK~~~~~~~~G~~~~~ 223 (371)
T 2e7j_A 149 VLALITYPDGNYGNLPDVKKIAKVCSEYDVPLLVNGAYAIGRM-----PVSLKEIGADFIVGSGHKSMAASGPIGVMGMK 223 (371)
T ss_dssp EEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTTBTTB-----CCCHHHHTCSEEEEEHHHHSSCCSSCEEEEEC
T ss_pred EEEEEECCCCCCcccCCHHHHHHHHHHcCCeEEEECccccCCC-----CCChhhcCCCEEEecCCcCCCCCCCcEEEEEe
Confidence 999999888774 67899999999999999999999876532 11122 5799999999998665 66999998
Q ss_pred CCCcchhhHHHH-hhhcccCCC------CCCChHHHHHHHHHHHHHhcChHHHHHHHHH--HHHHHHHHHHHHhCCcEEe
Q 014724 328 KDPVLGVELESA-INNAVFPGL------QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKV--VSNCRALASRLVELGYKLV 398 (419)
Q Consensus 328 ~~~~~~~~l~~~-i~~~~~~~~------~g~p~~~~iaala~al~~~~~~~~~~~~~~v--~~n~~~l~~~L~~~G~~v~ 398 (419)
++ +.+. +......+. .++++...++++..+++.+.. ++.+++ .++++++.+.|++.|+++.
T Consensus 224 ~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~l~~~L~~~~~~~~ 293 (371)
T 2e7j_A 224 EE------WAEIVLRRSEKYKNKEVELLGCTARGATIITLMASFPHVRE----RIKRWDEEVEKARRFAAEMEKLGIKQL 293 (371)
T ss_dssp TT------TTTTTTCBCSSCTTSBGGGTTCCCCSHHHHHHHHHHHHHHH----HGGGHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred ch------hhhhhccccccCcccccccccCCcCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHcCcEEe
Confidence 84 4444 433222111 234455555555556655431 556667 8889999999998899887
Q ss_pred cCC-CcceeEEEEeC
Q 014724 399 SGG-SDNHLVLVDLR 412 (419)
Q Consensus 399 ~~~-t~~hlv~vd~~ 412 (419)
... ...+++|+++.
T Consensus 294 ~~~~~~~~~~~~~~~ 308 (371)
T 2e7j_A 294 GDNPHNHDLMFFHAE 308 (371)
T ss_dssp SSSSCCSSEEEEECH
T ss_pred cCCCccCceEEEECC
Confidence 531 14678898863
No 56
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.90 E-value=7.7e-23 Score=202.70 Aligned_cols=281 Identities=11% Similarity=0.145 Sum_probs=189.3
Q ss_pred hcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcC--CCCCCCceeEecCChH
Q 014724 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN--LDENKWGVNVQPLSGS 178 (419)
Q Consensus 103 ~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g--~~~~~~~v~V~~~sGt 178 (419)
+.|+|..+++. +++.|++++.+.+.+. ..+|+.. ..++++.+++++++.+| ++++ ..+++++|+
T Consensus 25 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~--------~~~~~~~l~~~l~~~~g~~~~~~---~v~~~~g~~ 92 (383)
T 3kax_A 25 ELIHAWIADMDFEVPQPIQTALKKRIEHP-IFGYTLP--------PENIGDIICNWTKKQYNWDIQKE---WIVFSAGIV 92 (383)
T ss_dssp CCEECCCSSCSSCCCHHHHHHHHHHHHSC-CCCCCCC--------CTTHHHHHHHHHHHHHCCCCCGG---GEEEESCHH
T ss_pred CeeecccccCCCCCCHHHHHHHHHHHhcC-CCCCCCC--------CHHHHHHHHHHHHHHhCCCCChh---hEEEcCCHH
Confidence 45778777654 5899999999888643 2244331 12455567788999999 4443 224445567
Q ss_pred HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCC--CCCCCHHHHHHHhhhcCCeEEE
Q 014724 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES--TGLVDYDMLEKTAILFRPKLII 256 (419)
Q Consensus 179 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~--~~~iD~d~Le~~l~~~~pklIi 256 (419)
+|+..++.++++|||+|++..|.|.++.. .+...|. +++.++++++ ++.+|+++|++.+. .++++|+
T Consensus 93 ~a~~~~~~~l~~~gd~vl~~~~~~~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~ 161 (383)
T 3kax_A 93 PALSTSIQAFTKENESVLVQPPIYPPFFE--------MVTTNNR--QLCVSPLQKQNDTYAIDFEHLEKQFQ-QGVKLML 161 (383)
T ss_dssp HHHHHHHHHHCCTTCEEEECSSCCHHHHH--------HHHHTTC--EEEECCCEEETTEEECCHHHHHHHHT-TTCCEEE
T ss_pred HHHHHHHHHhCCCCCEEEEcCCCcHHHHH--------HHHHcCC--EEEeccceecCCcEEEcHHHHHHHhC-cCCeEEE
Confidence 89999999999999999999998876531 2234555 4455544422 34699999999994 5899999
Q ss_pred EcCCCCCC--cC---ChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC-------CCcEEEeCCCCcC--CCCCee
Q 014724 257 AGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-------YCDVVTTTTHKSL--RGPRGG 322 (419)
Q Consensus 257 ~~~s~~p~--~~---dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~-------~~Div~~S~hK~l--~GprgG 322 (419)
+++++||+ .. ++++|.++|++||++||+|++|. ++...+....++. ..+++++|+||++ +|.|.|
T Consensus 162 i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G 240 (383)
T 3kax_A 162 LCSPHNPIGRVWKKEELTKLGSLCTKYNVIVVADEIHS-DIIYADHTHTPFASLSEELAARTITCMAPSKTFNIAGLQAS 240 (383)
T ss_dssp EESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTT-TCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCE
T ss_pred EeCCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEEcccc-ccccCCCCceeHhhcCccccCcEEEEEEChhhccCcchhhe
Confidence 99899885 33 36777788999999999999974 4444332122221 2348899999987 677889
Q ss_pred EEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC--CcEEecC
Q 014724 323 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLVSG 400 (419)
Q Consensus 323 ~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~--G~~v~~~ 400 (419)
+++++++ ++.+.+.........++++....+++..++... .+..++..+++.++++++.+.|++. |+++..+
T Consensus 241 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 314 (383)
T 3kax_A 241 IIIIPNE-----KLRQAFTSIQYRQGFHGLNIFAYTAMQSAYTEC-NDWLNEIRFYIEDNAKFACEYIKDHIPTLSVMKP 314 (383)
T ss_dssp EEECCCH-----HHHHHHHHHHHHTTCCCCCHHHHHHHHHHTTTC-HHHHHHHHHHHHHHHHHHHHHHHHHCTTCEECCC
T ss_pred EEEeCCH-----HHHHHHHHHHhhcccCCCCHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecC
Confidence 9988543 566666543322222344444444444444432 1235777888999999999999884 8888753
Q ss_pred CCcceeEEEEeCCc
Q 014724 401 GSDNHLVLVDLRPM 414 (419)
Q Consensus 401 ~t~~hlv~vd~~~~ 414 (419)
..+.++|+++...
T Consensus 315 -~~~~~~~~~~~~~ 327 (383)
T 3kax_A 315 -EGSFLLWIDCSAL 327 (383)
T ss_dssp -SBSSEEEEECGGG
T ss_pred -CceEEEEEEcccc
Confidence 3456677888653
No 57
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.90 E-value=5.5e-22 Score=200.44 Aligned_cols=305 Identities=12% Similarity=0.057 Sum_probs=204.2
Q ss_pred hccccccChhHHHHHHHHHHHhhhcccccccCCC--ChHHHHHHHhhhhhcc--CCCCCCCCCCCCchhHHHHHHHHHHH
Q 014724 80 DYSLGEADPEVCEIITKEKERQFKSLELIASENF--TSRAVMEAVGSCLTNK--YSEGLPGKRYYGGNEYIDELETLCQK 155 (419)
Q Consensus 80 ~~~l~~~~~~~~~~~~~e~~r~~~~i~L~~sen~--~~~~V~eal~~~l~~~--y~~g~p~~r~~~g~~~~~~lE~~~~~ 155 (419)
++++...++.++..+.+... +...|+|..+.+. .++.|++++.+.+... ...+|+.. .|. .++++.+.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~-~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~---~g~---~~l~~~la~ 88 (429)
T 1yiz_A 16 PKRYQGSTKSVWVEYIQLAA-QYKPLNLGQGFPDYHAPKYALNALAAAANSPDPLANQYTRG---FGH---PRLVQALSK 88 (429)
T ss_dssp SSSCCCCTTCHHHHHHHHHH-HHCCEECCSSSCSSCCCHHHHHHHHHHHTCSCGGGGSCCCS---SCC---HHHHHHHHH
T ss_pred hHHhhhCCchHHHHHHHHhc-cCCEEEecCCCCCCCCCHHHHHHHHHHHhccccCccCCCCC---CCc---HHHHHHHHH
Confidence 45566677777766654332 3566888877642 5799999998887541 11233321 122 366666777
Q ss_pred HHHHHcCCCCC-CCceeEecCC-hHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCC
Q 014724 156 RALAAFNLDEN-KWGVNVQPLS-GSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE 233 (419)
Q Consensus 156 ~la~~~g~~~~-~~~v~V~~~s-Gt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~ 233 (419)
++.+.+|.+.+ ++ +|++++ |++|+..++.++++|||+|++.+|.|.++.. .+...|. +++.+++++
T Consensus 89 ~l~~~~g~~~~~~~--~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~p~y~~~~~--------~~~~~g~--~~~~~~~~~ 156 (429)
T 1yiz_A 89 LYSQLVDRTINPMT--EVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEP--------MVKAAGG--IPRFIPLKP 156 (429)
T ss_dssp HHHHHHTSCCCTTT--SEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTC--EEEEEECBC
T ss_pred HHHHHhCCCCCCcC--CEEEecChHHHHHHHHHHhcCCCCEEEEcCCCchhHHH--------HHHHcCC--EEEEEeCCc
Confidence 77777785421 21 244455 5789999999999999999999998876531 2234455 444444543
Q ss_pred C---------CCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cC---ChHHHHHHHHHhCCEEEEeccccccccccCC-c
Q 014724 234 S---------TGLVDYDMLEKTAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASV-V 298 (419)
Q Consensus 234 ~---------~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~---dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~-~ 298 (419)
+ ++.+|+++|++.++ .++++|++++++||+ .. ++++|+++|++||++||+|++|. ++.+.+. .
T Consensus 157 ~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~-~~~~~g~~~ 234 (429)
T 1yiz_A 157 NKTGGTISSADWVLDNNELEALFN-EKTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYE-HMVFEPFEH 234 (429)
T ss_dssp CCSSSSEEGGGCBCCHHHHHHHCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTT-TCBCTTSCC
T ss_pred ccccccccccCcccCHHHHHHHhc-cCceEEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEecccc-ccccCCCCC
Confidence 3 45799999999986 478999988888874 33 48999999999999999999974 4433321 1
Q ss_pred CC--CCC---CCcEEEeCCCCcC--CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHH-----
Q 014724 299 AD--PFK---YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKH----- 366 (419)
Q Consensus 299 ~~--~~~---~~Div~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~----- 366 (419)
.. .++ +.|++++|+||+| +|.|.|++++++ ++.+.+......... +.+....+++..+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~------~~~~~l~~~~~~~~~-~~~~~~~~a~~~~l~~~~~~~ 307 (429)
T 1yiz_A 235 IRICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGPE------ALLKNLQMVHQNCVY-TCATPIQEAIAVGFETELKRL 307 (429)
T ss_dssp CCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEESCH------HHHHHHHHHHHTTTC-CCCHHHHHHHHHHHHHHHTTT
T ss_pred cChhhccCCcCceEEEecchhccCCCCcceEEEEeCH------HHHHHHHHHHhhccc-CCChHHHHHHHHHHhcccccc
Confidence 11 121 4689999999987 467789999986 666666543211112 2233334445556665
Q ss_pred hc-ChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeEEEEeCC
Q 014724 367 AQ-SPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 367 ~~-~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~vd~~~ 413 (419)
.. ...+++..+++.++++++.+.|++.|+++..+ ...+++|+++..
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~g~~~~~~~~~ 354 (429)
T 1yiz_A 308 KSPECYFNSISGELMAKRDYMASFLAEVGMNPTVP-QGGYFMVADWSS 354 (429)
T ss_dssp TSTTSHHHHHHHHHHHHHHHHHHHHHHHTCEEEEC-SBSSEEEEECCS
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC-CcceEEEEEccc
Confidence 21 23457788889999999999999889987653 346789999865
No 58
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.90 E-value=1.4e-22 Score=206.65 Aligned_cols=300 Identities=14% Similarity=0.133 Sum_probs=201.1
Q ss_pred cChhHHHHHHHHHH--------HhhhcccccccCC-C-ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHH
Q 014724 86 ADPEVCEIITKEKE--------RQFKSLELIASEN-F-TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQK 155 (419)
Q Consensus 86 ~~~~~~~~~~~e~~--------r~~~~i~L~~sen-~-~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~ 155 (419)
+++.++..+.+... ...+.|+|..+.. + .++.|++++.+.+......+|+.. .|. .++++.+.+
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~---~g~---~~lr~~ia~ 106 (447)
T 3b46_A 33 TAKDVWSLTNEAAAKAANNSKNQGRELINLGQGFFSYSPPQFAIKEAQKALDIPMVNQYSPT---RGR---PSLINSLIK 106 (447)
T ss_dssp CCCCHHHHHHHHHHHHCCC---TTSCCEECCCCSCSSCCCHHHHHHHHHHTTSGGGGSCCCT---TCC---HHHHHHHHH
T ss_pred cCccHHHHHHHHHHhhccchhccCCCeEEccCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCC---CCC---HHHHHHHHH
Confidence 66677766655432 2345688887763 2 579999999887754111234321 122 366666677
Q ss_pred HHHHHcCCCCCCCceeEecCCh-HHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCC
Q 014724 156 RALAAFNLDENKWGVNVQPLSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES 234 (419)
Q Consensus 156 ~la~~~g~~~~~~~v~V~~~sG-t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~ 234 (419)
++.+.+|.+.+ .+ +|++++| ++|+..++.++++|||+|++.+|.|.++.. .+...|.. ++.++.+++
T Consensus 107 ~l~~~~g~~~~-~~-~v~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~g~~--~~~v~~~~~ 174 (447)
T 3b46_A 107 LYSPIYNTELK-AE-NVTVTTGANEGILSCLMGLLNAGDEVIVFEPFFDQYIP--------NIELCGGK--VVYVPINPP 174 (447)
T ss_dssp HHTTTTTSCCC-GG-GEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTCE--EEEEEEECC
T ss_pred HHHHhcCCCCC-hh-hEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhHHH--------HHHHcCCE--EEEEeCCCc
Confidence 77777776432 11 3555555 789999999999999999999998876542 23345654 444444433
Q ss_pred -----------CCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--c---CChHHHHHHHHHhCCEEEEeccccccccccCCc
Q 014724 235 -----------TGLVDYDMLEKTAILFRPKLIIAGASAYPR--D---FDYPRMRQIADAVGALLMMDMAHISGLVAASVV 298 (419)
Q Consensus 235 -----------~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~---~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~ 298 (419)
++.+|+++|++.+. .++|+|++++|+||+ . .++++|+++|++||++||+|++|. ++.+.+..
T Consensus 175 ~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~-~~~~~g~~ 252 (447)
T 3b46_A 175 KELDQRNTRGEEWTIDFEQFEKAIT-SKTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYE-HLYFTDSF 252 (447)
T ss_dssp GGGGTSCBCSTTSEECHHHHHTTCC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTT-TCBCSSCC
T ss_pred cccccccccccCcccCHHHHHHhhc-cCCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccch-hcccCCCC
Confidence 46799999999986 478999999999885 2 368999999999999999999964 44443321
Q ss_pred CC--CC-C---CCcEEEeCCCCcC--CCCCeeEEEE-eCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhc-
Q 014724 299 AD--PF-K---YCDVVTTTTHKSL--RGPRGGMIFF-KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ- 368 (419)
Q Consensus 299 ~~--~~-~---~~Div~~S~hK~l--~GprgG~i~~-~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~- 368 (419)
.+ .+ . +.+++++|+||+| +|+|.|++++ ++ ++.+.+.........+.+ ....+++..+++...
T Consensus 253 ~~~~~~~~~~~~~~i~i~S~sK~~~~~G~riG~~~~~~~------~l~~~l~~~~~~~~~~~~-~~~~~a~~~aL~~~~~ 325 (447)
T 3b46_A 253 TRIATLSPEIGQLTLTVGSAGKSFAATGWRIGWVLSLNA------ELLSYAAKAHTRICFASP-SPLQEACANSINDALK 325 (447)
T ss_dssp CCGGGSCHHHHTTEEEEEEHHHHTTCTTSCCEEEECSCH------HHHHHHHHHHHHHTSSCC-HHHHHHHHHHHHHHHH
T ss_pred cCHHHcCCCCCCcEEEEecCchhcCCcchhhEEEEeCCH------HHHHHHHHHHhhccCCCC-hHHHHHHHHHHhCCcc
Confidence 11 12 1 5689999999987 5889999999 65 566655432111111222 333444455665542
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeEEEEeCC
Q 014724 369 SPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 369 ~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~vd~~~ 413 (419)
...+++..+++.++++++.+.|++.|+++.. .....++|+++..
T Consensus 326 ~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~g~~~~~~~~~ 369 (447)
T 3b46_A 326 IGYFEKMRQEYINKFKIFTSIFDELGLPYTA-PEGTYFVLVDFSK 369 (447)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHHHHHTCCEEC-CSBSSEEEEECTT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHCCCeecC-CCeeEEEEEeccc
Confidence 1235777888999999999999998988764 2346788999864
No 59
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.90 E-value=1.5e-22 Score=200.79 Aligned_cols=296 Identities=13% Similarity=0.096 Sum_probs=193.6
Q ss_pred cCh-hHHHHHHHHHHHh----hhcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHH
Q 014724 86 ADP-EVCEIITKEKERQ----FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRAL 158 (419)
Q Consensus 86 ~~~-~~~~~~~~e~~r~----~~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la 158 (419)
+++ ..+..+.+...+. .+.|+|..+++. .++.|++++.+.+.+....+|+ ......++++.+.+++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~g~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~------~~~~~~~l~~~ia~~~~ 77 (376)
T 2dou_A 4 VPEPSVFLVVDEAKRKARERGVGLIDLSIGSTDLPPPEAPLKALAEALNDPTTYGYC------LKSCTLPFLEEAARWYE 77 (376)
T ss_dssp CCCTHHHHHHHHHHHHHHHTTCCCEECSSCCCCCCCCHHHHHHHHHHTTCGGGSSCC------CHHHHHHHHHHHHHHHH
T ss_pred CCccchHHHHHHHHHHhhccCCCEEeccCCCCCCCCCHHHHHHHHHHHhCCCcCCCC------CCCCCHHHHHHHHHHHH
Confidence 444 5555444333322 346888887754 5799999998887532122332 22234567767777777
Q ss_pred HHcCCCCC-CCceeEecC-ChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCC
Q 014724 159 AAFNLDEN-KWGVNVQPL-SGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG 236 (419)
Q Consensus 159 ~~~g~~~~-~~~v~V~~~-sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~ 236 (419)
+.+|++.+ +. +|+++ +|++|+..++.++++|||+|++.+|.|.++.. .+...|. +++.+++ ++++
T Consensus 78 ~~~g~~~~~~~--~v~~~~g~~~a~~~~~~~l~~~gd~vl~~~p~y~~~~~--------~~~~~g~--~~~~~~~-~~~~ 144 (376)
T 2dou_A 78 GRYGVGLDPRR--EALALIGSQEGLAHLLLALTEPEDLLLLPEVAYPSYFG--------AARVASL--RTFLIPL-REDG 144 (376)
T ss_dssp HHHSCCCCTTT--SEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHH--------HHHHTTC--EEEEECB-CTTS
T ss_pred HHhCCCCCCCc--cEEEcCCcHHHHHHHHHHhcCCCCEEEECCCCcHhHHH--------HHHHcCC--EEEEeeC-CCCC
Confidence 77798621 11 24444 45789999999999999999999998766531 1234455 4445555 3456
Q ss_pred CCCHHHHHHHhhhcCCeEEEEcCCCCCC--cC---ChHHHHHHHHHhCCEEEEeccccccccccCCcCCCC---C--CCc
Q 014724 237 LVDYDMLEKTAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K--YCD 306 (419)
Q Consensus 237 ~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~---dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~---~--~~D 306 (419)
.+|+++|++.+.+ ++++|++++|+||+ .. ++++|+++|++||++||+|++|.. +...+...+.+ + +.+
T Consensus 145 ~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~~~ 222 (376)
T 2dou_A 145 LADLKAVPEGVWR-EAKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVD-QVYEGEAPSPLALPGAKERV 222 (376)
T ss_dssp SBCGGGSCHHHHH-HEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGG-GBSSSCCCCGGGSTTGGGTE
T ss_pred CCCHHHHHHhhcc-CceEEEECCCCCCcCccCCHHHHHHHHHHHHHcCCEEEEEccchh-cccCCCCCChhhcCCCCCcE
Confidence 7999999998864 78999998888875 33 368899999999999999999753 33332211212 1 346
Q ss_pred EEEeCCCCcC--CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHH
Q 014724 307 VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCR 384 (419)
Q Consensus 307 iv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~ 384 (419)
++++|+||+| +|+|.|++++++ ++.+.+.........+. +....+++..+++.. ...+++..+++.++++
T Consensus 223 i~~~s~sK~~~~~G~r~G~~~~~~------~~~~~l~~~~~~~~~~~-~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~ 294 (376)
T 2dou_A 223 VELFSLSKSYNLAGFRLGFALGSE------EALARLERVKGVIDFNQ-YAGVLRMGVEALKTP-KEVVRGYARVYRERAL 294 (376)
T ss_dssp EEEEEHHHHHTCGGGCCEEEEECH------HHHHHHHHHHHHHCCCS-CHHHHHHHHHHHTSC-HHHHHHHHHHHHHHHH
T ss_pred EEEecchhhcCChhheeEEEecCH------HHHHHHHHHHHhcccCC-CHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHH
Confidence 8899999987 577899999887 66666654322222222 333333444445432 2345677888889999
Q ss_pred HHHHHHHhCCcEEecCCCcceeEEEEeC
Q 014724 385 ALASRLVELGYKLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 385 ~l~~~L~~~G~~v~~~~t~~hlv~vd~~ 412 (419)
++.+.|++. +++..+ ..++++|+++.
T Consensus 295 ~l~~~L~~~-~~~~~~-~~~~~~~~~~~ 320 (376)
T 2dou_A 295 GMAEALKGV-LSLLPP-RATMYLWGRLP 320 (376)
T ss_dssp HHHHHHTTT-SEECCC-CBSSEEEEECC
T ss_pred HHHHHHHHh-cCccCC-CeeEEEEEECC
Confidence 999999988 776642 34567888885
No 60
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.90 E-value=1.5e-22 Score=202.18 Aligned_cols=276 Identities=15% Similarity=0.094 Sum_probs=186.4
Q ss_pred hhcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCC--CCCCceeEecC-C
Q 014724 102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD--ENKWGVNVQPL-S 176 (419)
Q Consensus 102 ~~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~--~~~~~v~V~~~-s 176 (419)
+..|+|..+++. .++.+++++.+.+... ..+|+.. .| ..++++.+.+++.+.+|++ ++ +++++ +
T Consensus 41 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~---~g---~~~lr~~la~~~~~~~g~~~~~~----~v~~~~g 109 (389)
T 1o4s_A 41 EDVINLTAGEPDFPTPEPVVEEAVRFLQKG-EVKYTDP---RG---IYELREGIAKRIGERYKKDISPD----QVVVTNG 109 (389)
T ss_dssp CCCEECCCSSCSSCCCHHHHHHHHHHHTTC-CCCCCCT---TC---CHHHHHHHHHHHHHHHTCCCCGG----GEEEESH
T ss_pred CCEEEccCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCC---CC---CHHHHHHHHHHHHHHhCCCCCHH----HEEEecC
Confidence 356888877653 5789999998887542 2234321 12 2467777777777777874 32 24444 5
Q ss_pred hHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCC-CCCCCCHHHHHHHhhhcCCeEE
Q 014724 177 GSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKLI 255 (419)
Q Consensus 177 Gt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~-~~~~iD~d~Le~~l~~~~pklI 255 (419)
|++|+..++.++++|||+|++++|.|.++.. .+...|. +++.++.++ +++.+|+++|++.+++ ++++|
T Consensus 110 ~t~al~~~~~~l~~~gd~Vl~~~~~~~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~v 178 (389)
T 1o4s_A 110 AKQALFNAFMALLDPGDEVIVFSPVWVSYIP--------QIILAGG--TVNVVETFMSKNFQPSLEEVEGLLVG-KTKAV 178 (389)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTC--EEEEEECCGGGTTCCCHHHHHHTCCT-TEEEE
T ss_pred HHHHHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHcCC--EEEEEecCCccCCCCCHHHHHHhccc-CceEE
Confidence 5789999999999999999999998876531 2234555 444444443 2567999999999875 78999
Q ss_pred EEcCCCCCC--cCC---hHHHHHHHHHhCCEEEEeccccccccccCCcCCC--C---CCCcEEEeCCCCcC--CCCCeeE
Q 014724 256 IAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP--F---KYCDVVTTTTHKSL--RGPRGGM 323 (419)
Q Consensus 256 i~~~s~~p~--~~d---l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~--~---~~~Div~~S~hK~l--~GprgG~ 323 (419)
++++++||+ ..+ +++|+++|+++|++||+|++|..+ ...+...+. + .+.|++++|+||+| +|.|.|+
T Consensus 179 ~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~-~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~ 257 (389)
T 1o4s_A 179 LINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSL-VYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGY 257 (389)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTS-BCSSCCCCHHHHCSSSTTEEEEEESTTTTTCGGGCCEE
T ss_pred EEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccccc-ccCCCCCCHhhcCCCCCcEEEEeechhhcCCcccceEE
Confidence 888888874 334 899999999999999999997643 332211111 1 25689999999998 5667899
Q ss_pred EEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCc
Q 014724 324 IFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSD 403 (419)
Q Consensus 324 i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~ 403 (419)
+++++ ++.+.+......+..+.+... ..+...++. .+.++..+++.++++++.+.|++.|+++..+ ..
T Consensus 258 l~~~~------~~~~~l~~~~~~~~~~~~~~~-~~a~~~~l~----~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~ 325 (389)
T 1o4s_A 258 LISSE------KVATAVSKIQSHTTSCINTVA-QYAALKALE----VDNSYMVQTFKERKNFVVERLKKMGVKFVEP-EG 325 (389)
T ss_dssp EECCH------HHHHHHHHHHHHHTCSCCHHH-HHHHHHHTT----CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCC-SB
T ss_pred EEeCH------HHHHHHHHHhhhcccCCCHHH-HHHHHHHHh----ccHHHHHHHHHHHHHHHHHHHHhcCCeeecC-Cc
Confidence 99977 566665543222222233222 222222332 2256778888899999999999989887642 34
Q ss_pred ceeEEEEeC
Q 014724 404 NHLVLVDLR 412 (419)
Q Consensus 404 ~hlv~vd~~ 412 (419)
+.++|+++.
T Consensus 326 ~~~~~~~~~ 334 (389)
T 1o4s_A 326 AFYLFFKVR 334 (389)
T ss_dssp SSEEEEECS
T ss_pred ceEEEEeCC
Confidence 567888774
No 61
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.90 E-value=2.3e-22 Score=198.40 Aligned_cols=272 Identities=13% Similarity=0.136 Sum_probs=187.8
Q ss_pred cCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHcc
Q 014724 110 SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL 189 (419)
Q Consensus 110 sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all 189 (419)
+..++++.|++++.+.+.+.+ ++|...+..+.. ..++.+.+++++++++|++++ ..+++++|++|+..++.++.
T Consensus 8 ~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~la~~~~~~~~---~i~~~~g~~~a~~~~~~~~~ 81 (382)
T 4hvk_A 8 SAKPVDERILEAMLPYMTESF--GNPSSVHSYGFK-AREAVQEAREKVAKLVNGGGG---TVVFTSGATEANNLAIIGYA 81 (382)
T ss_dssp TCCCCCHHHHHHHHHHHHTSC--CCTTCSSHHHHH-HHHHHHHHHHHHHHHTTCTTE---EEEEESSHHHHHHHHHHHHH
T ss_pred CcCCCCHHHHHHHHHHHHhhc--CCCcccchHHHH-HHHHHHHHHHHHHHHcCCCcC---eEEEECCchHHHHHHHHHhh
Confidence 345688999999999886644 455443322222 234444677899999999763 12445556789999999987
Q ss_pred ----CCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC-
Q 014724 190 ----KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR- 264 (419)
Q Consensus 190 ----~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~- 264 (419)
+|||+|++++++|.++.... ..+...|. +++.++++ +++.+|+++|++.+++ ++++|++++++||+
T Consensus 82 ~~~~~~gd~vi~~~~~~~~~~~~~-----~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~-~~~~v~~~~~~nptG 152 (382)
T 4hvk_A 82 MRNARKGKHILVSAVEHMSVINPA-----KFLQKQGF--EVEYIPVG-KYGEVDVSFIDQKLRD-DTILVSVQHANNEIG 152 (382)
T ss_dssp HHHGGGCCEEEEETTCCHHHHHHH-----HHHHHTTC--EEEEECBC-TTSCBCHHHHHHHCCT-TEEEEECCSBCTTTC
T ss_pred hhhcCCCCEEEECCCCcHHHHHHH-----HHHHhcCC--EEEEeccC-CCCCcCHHHHHHHhcc-CceEEEEECCCCCce
Confidence 99999999999887764211 01112354 45555555 4678999999999975 78999999988874
Q ss_pred -cCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcCCCCC-eeEEEEeCCCcchhhHHHHh
Q 014724 265 -DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPR-GGMIFFKKDPVLGVELESAI 340 (419)
Q Consensus 265 -~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l~Gpr-gG~i~~~~~~~~~~~l~~~i 340 (419)
..|+++|.++|++||+ |++|++|..|.. +.++. ++|++++|+||++ ||. .|+++.+++. .+
T Consensus 153 ~~~~~~~i~~l~~~~~~-li~D~a~~~~~~-----~~~~~~~~~d~~~~s~~K~~-g~~g~g~~~~~~~~--------~~ 217 (382)
T 4hvk_A 153 TIQPVEEISEVLAGKAA-LHIDATASVGQI-----EVDVEKIGADMLTISSNDIY-GPKGVGALWIRKEA--------KL 217 (382)
T ss_dssp BBCCHHHHHHHHSSSSE-EEEECTTTBTTB-----CCCHHHHTCSEEEEESGGGT-SCTTCEEEEEETTC--------CC
T ss_pred eeCCHHHHHHHHHHcCE-EEEEhHHhcCCC-----CCCchhcCCCEEEEeHHHhc-CCCceEEEEEcCcc--------Cc
Confidence 6799999999999999 999999876533 11222 6899999999965 665 4888888741 11
Q ss_pred hhcccC------CCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEEecCC--CcceeEEEEe
Q 014724 341 NNAVFP------GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGG--SDNHLVLVDL 411 (419)
Q Consensus 341 ~~~~~~------~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~~~~--t~~hlv~vd~ 411 (419)
...... ...++++...++++..++.... .++++..+++.++++++.+.|++. |+++.... .-.+++++.+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 296 (382)
T 4hvk_A 218 QPVILGGGQENGLRSGSENVPSIVGFGKAAEITA-MEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRF 296 (382)
T ss_dssp CCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEE
T ss_pred CcccccCCCcCccccCCcCHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCCEEEEEE
Confidence 111110 1123445566666666666543 456888899999999999999986 88876422 1135666666
Q ss_pred C
Q 014724 412 R 412 (419)
Q Consensus 412 ~ 412 (419)
.
T Consensus 297 ~ 297 (382)
T 4hvk_A 297 S 297 (382)
T ss_dssp T
T ss_pred C
Confidence 4
No 62
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.90 E-value=2.6e-22 Score=200.56 Aligned_cols=281 Identities=14% Similarity=0.134 Sum_probs=190.3
Q ss_pred hcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcC--CCCCCCceeEecCChH
Q 014724 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN--LDENKWGVNVQPLSGS 178 (419)
Q Consensus 103 ~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g--~~~~~~~v~V~~~sGt 178 (419)
+.|+|..+++. .++.|++++.+.+.+. ..+|+. + ..++++.+.+++.+.+| ++++ ..+++++|+
T Consensus 32 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~-----~---~~~l~~~la~~l~~~~g~~~~~~---~v~~t~g~~ 99 (399)
T 1c7n_A 32 EVVPLSVADMEFKNPPELIEGLKKYLDET-VLGYTG-----P---TEEYKKTVKKWMKDRHQWDIQTD---WIINTAGVV 99 (399)
T ss_dssp TCCCCCSSSCSSCCCHHHHHHHHHHHHHC-CCSSBC-----C---CHHHHHHHHHHHHHHHCCCCCGG---GEEEESSHH
T ss_pred CceeeeecCCCCCCCHHHHHHHHHHHhcC-CCCCCC-----C---cHHHHHHHHHHHHHHhCCCCChh---hEEEcCCHH
Confidence 56788777753 5799999998887532 123332 1 24677677777777788 4443 124444557
Q ss_pred HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCC--CCCCCHHHHHHHhhhcCCeEEE
Q 014724 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES--TGLVDYDMLEKTAILFRPKLII 256 (419)
Q Consensus 179 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~--~~~iD~d~Le~~l~~~~pklIi 256 (419)
+|+..++.++++|||+|++.+|.|.++.. .+...|. +++.++.+++ ++.+|+++|++.+++.++++|+
T Consensus 100 ~a~~~~~~~l~~~gd~vl~~~p~~~~~~~--------~~~~~g~--~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~ 169 (399)
T 1c7n_A 100 PAVFNAVREFTKPGDGVIIITPVYYPFFM--------AIKNQER--KIIECELLEKDGYYTIDFQKLEKLSKDKNNKALL 169 (399)
T ss_dssp HHHHHHHHHHCCTTCEEEECSSCCTHHHH--------HHHTTTC--EEEECCCEEETTEEECCHHHHHHHHTCTTEEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEcCCCcHhHHH--------HHHHcCC--EEEecccccCCCCEEEcHHHHHHHhccCCCcEEE
Confidence 89999999999999999999998877542 2234454 4555554322 2469999999999745789999
Q ss_pred EcCCCCCC--cCC---hHHHHHHHHHhCCEEEEeccccccccccCCcCCCC---C----CCcEEEeCCCCcC--CCCCee
Q 014724 257 AGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K----YCDVVTTTTHKSL--RGPRGG 322 (419)
Q Consensus 257 ~~~s~~p~--~~d---l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~---~----~~Div~~S~hK~l--~GprgG 322 (419)
+++++||+ ..+ +++|+++|++||++||+|++|.. +...+....++ . ..+++++|+||+| +|+|.|
T Consensus 170 ~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G 248 (399)
T 1c7n_A 170 FCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFD-LIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMS 248 (399)
T ss_dssp EESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTT-CBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCE
T ss_pred EcCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccc-cccCCCCcccHHHcCccccCcEEEEEeChhhccccchheE
Confidence 88889884 445 89999999999999999999753 33333211122 1 2358899999987 677889
Q ss_pred EEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHh-C-CcEEecC
Q 014724 323 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-L-GYKLVSG 400 (419)
Q Consensus 323 ~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~-~-G~~v~~~ 400 (419)
+++++++ ++.+.+.........++++....+++..++... .+.+++..+++.++++++.+.|++ . |+++..+
T Consensus 249 ~~~~~~~-----~~~~~l~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 322 (399)
T 1c7n_A 249 NIIIKNP-----DIRERFTKSRDATSGMPFTTLGYKACEICYKEC-GKWLDGCIKVIDKNQRIVKDFFEVNHPEIKAPLI 322 (399)
T ss_dssp EEECCCH-----HHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHCTTSBCCCC
T ss_pred EEEECCH-----HHHHHHHHHHhhcccCCCCHHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEecC
Confidence 9998753 566666543333222233444444444456542 234577788889999999999988 5 8877642
Q ss_pred CCcceeEEEEeCC
Q 014724 401 GSDNHLVLVDLRP 413 (419)
Q Consensus 401 ~t~~hlv~vd~~~ 413 (419)
..+.++|+++..
T Consensus 323 -~~~~~~~~~~~~ 334 (399)
T 1c7n_A 323 -EGTYLQWIDFRA 334 (399)
T ss_dssp -SBSSEEEEECGG
T ss_pred -CceEEEEEEccc
Confidence 345567888864
No 63
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.90 E-value=1.7e-22 Score=204.08 Aligned_cols=283 Identities=12% Similarity=0.113 Sum_probs=195.1
Q ss_pred hhcccccccCC-C-ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCC--CCCCCceeEecC-C
Q 014724 102 FKSLELIASEN-F-TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPL-S 176 (419)
Q Consensus 102 ~~~i~L~~sen-~-~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~--~~~~~~v~V~~~-s 176 (419)
++.|+|..+++ + .+|.|++++.+.+... ..+|+.. ..++++.+++++++.+|. +++ .|+++ +
T Consensus 61 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~--------~~~l~~~l~~~l~~~~g~~~~~~----~v~~~~g 127 (421)
T 3l8a_A 61 PELLQMWVADMDFLPVPEIKEAIINYGREH-IFGYNYF--------NDDLYQAVIDWERKEHDYAVVKE----DILFIDG 127 (421)
T ss_dssp TTCEECCSSCCCSCCCHHHHHHHHHHHHHC-CSSCBCC--------CHHHHHHHHHHHHHHHCCCCCGG----GEEEESC
T ss_pred CCeeecccCCCCCCCCHHHHHHHHHHHhcC-CcCCCCC--------CHHHHHHHHHHHHHHhCCCCCHH----HEEEcCC
Confidence 45677776663 3 5899999999887542 2244321 135666777899999884 442 24445 5
Q ss_pred hHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEE
Q 014724 177 GSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLII 256 (419)
Q Consensus 177 Gt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi 256 (419)
|++|+..++.+++++||+|++..|.|.++.. .+...|..+..++++....++.+|+++|++.+++.++++|+
T Consensus 128 ~~ea~~~a~~~~~~~gd~Vi~~~~~y~~~~~--------~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vi 199 (421)
T 3l8a_A 128 VVPAISIALQAFSEKGDAVLINSPVYYPFAR--------TIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYL 199 (421)
T ss_dssp HHHHHHHHHHHHSCTEEEEEEEESCCHHHHH--------HHHHTTEEEEEEECEEETTEEECCHHHHHHHHHHTTEEEEE
T ss_pred HHHHHHHHHHHhcCCCCEEEECCCCcHHHHH--------HHHHCCCEEEeccccccCCCeeeCHHHHHHHhhccCCeEEE
Confidence 5679999999999999999999998866531 23345654444443312234579999999999755899999
Q ss_pred EcCCCCCC--c---CChHHHHHHHHHhCCEEEEeccccccccccCCcCCCC-----C--CCcEEEeCCCCcC--CCCCee
Q 014724 257 AGASAYPR--D---FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-----K--YCDVVTTTTHKSL--RGPRGG 322 (419)
Q Consensus 257 ~~~s~~p~--~---~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~-----~--~~Div~~S~hK~l--~GprgG 322 (419)
+++++||+ . .++++|+++|++||++||+|++| .++...+....++ + ..++++.|+||+| +|.+.|
T Consensus 200 l~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~De~~-~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G 278 (421)
T 3l8a_A 200 LCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIH-QDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNS 278 (421)
T ss_dssp EESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTT-TTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCE
T ss_pred ECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccc-cccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheE
Confidence 99998874 3 46899999999999999999997 4555443222222 1 2348899999987 577889
Q ss_pred EEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEEecCC
Q 014724 323 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGG 401 (419)
Q Consensus 323 ~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~~~~ 401 (419)
+++.+++ ++.+.+.........++++...++++..++... .+..++..+++.++++++.+.|++. |++++.+
T Consensus 279 ~~~~~~~-----~l~~~~~~~~~~~~~~~~n~~~~~a~~aal~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~i~~~~~- 351 (421)
T 3l8a_A 279 FAIIQNE-----SLRRKFQYRQLANNQHEVPTVGMIATQAAFQYG-KPWLEELKTVIEGNIKLVIKELEAKTKIKVMEP- 351 (421)
T ss_dssp EEECCSH-----HHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHCSCEEECC-
T ss_pred eEEcCCH-----HHHHHHHHHHHhcccCCCCHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHhCCCceEeCC-
Confidence 9998843 676666543322222344445555555566643 2335778888999999999999884 8888753
Q ss_pred CcceeEEEEeCC
Q 014724 402 SDNHLVLVDLRP 413 (419)
Q Consensus 402 t~~hlv~vd~~~ 413 (419)
..+.++|++++.
T Consensus 352 ~~~~~~~v~~~~ 363 (421)
T 3l8a_A 352 EGTYLVWLDFSA 363 (421)
T ss_dssp SBSSEEEEECGG
T ss_pred CeeEEEEEeccc
Confidence 456778899875
No 64
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.90 E-value=1e-22 Score=202.15 Aligned_cols=284 Identities=15% Similarity=0.094 Sum_probs=189.0
Q ss_pred cccccccC-CCChHHHHHHHhhhhhccCCCCCCCC-CCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHH
Q 014724 104 SLELIASE-NFTSRAVMEAVGSCLTNKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPAN 181 (419)
Q Consensus 104 ~i~L~~se-n~~~~~V~eal~~~l~~~y~~g~p~~-r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~ 181 (419)
.+.|..+. ...|+.|++++.+.+.+.. ...+.. +.|.. +. .....+++.+++++|++++ ..+++.+|++|+
T Consensus 17 ~i~l~~~~~~~~~~~v~~a~~~~~~~~~-~~~~~~~~~y~~--~~-~~~~~l~~~la~~~g~~~~---~v~~~~g~t~a~ 89 (390)
T 1elu_A 17 KTYFNFGGQGILPTVALEAITAMYGYLQ-ENGPFSIAANQH--IQ-QLIAQLRQALAETFNVDPN---TITITDNVTTGC 89 (390)
T ss_dssp SEECCTTTCCCCCHHHHHHHHHHHHHHH-HHCSSSHHHHHH--HH-HHHHHHHHHHHHHTTSCGG---GEEEESSHHHHH
T ss_pred eEEecCCccCCCCHHHHHHHHHHHHHHh-ccCCcchhhHHH--HH-HHHHHHHHHHHHHcCCCHH---HEEEeCChHHHH
Confidence 35555444 3467889999988875421 111110 01111 11 2223456888999998764 125556778999
Q ss_pred HHHHHHc-cCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCC-CCCCCCHHHHHHHhhhcCCeEEEEcC
Q 014724 182 FEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKLIIAGA 259 (419)
Q Consensus 182 ~~~~~al-l~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~-~~~~iD~d~Le~~l~~~~pklIi~~~ 259 (419)
..++.++ ++|||+|+++++.|.++..... ..+...|. +++.++.++ +++.+|+++|++.+++ ++++|++++
T Consensus 90 ~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~----~~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~ 162 (390)
T 1elu_A 90 DIVLWGLDWHQGDEILLTDCEHPGIIAIVQ----AIAARFGI--TYRFFPVAATLNQGDAAAVLANHLGP-KTRLVILSH 162 (390)
T ss_dssp HHHHHHSCCCTTCEEEEETTCCHHHHHHHH----HHHHHHCC--EEEEECCGGGSSSSCHHHHHHTTCCT-TEEEEEEES
T ss_pred HHHHhCCCCCCCCEEEEecCcccHHHHHHH----HHHHHhCc--EEEEEcCCCCCCccchHHHHHHhcCC-CceEEEEec
Confidence 9999999 8999999999998877531100 00123354 444444432 3578999999999874 789999999
Q ss_pred CCCCC--cCChHHHHHHHH----HhCCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcCCCCCe-eEEEEeCCC
Q 014724 260 SAYPR--DFDYPRMRQIAD----AVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDP 330 (419)
Q Consensus 260 s~~p~--~~dl~~I~~ia~----~~ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l~Gprg-G~i~~~~~~ 330 (419)
++||+ ..|+++|.++|+ ++|+++|+|++|..|.. +..+. +.|++++|+||++.|+.| |+++++++
T Consensus 163 ~~nptG~~~~~~~i~~l~~~~~~~~~~~li~Dea~~~g~~-----~~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~- 236 (390)
T 1elu_A 163 LLWNTGQVLPLAEIMAVCRRHQGNYPVRVLVDGAQSAGSL-----PLDFSRLEVDYYAFTGHKWFAGPAGVGGLYIHGD- 236 (390)
T ss_dssp BCTTTCCBCCHHHHHHHHHHCCSSSCCEEEEECTTTBTTB-----CCCTTTSCCSEEEEESSSTTCCCTTCEEEEECTT-
T ss_pred cccCCceecCHHHHHHHHhhhhhhcCcEEEEEcccccCCc-----CCChhhcCCCEEEccccccccCCCceEEEEECHH-
Confidence 88874 678999999999 99999999999876532 12222 679999999997656554 99999873
Q ss_pred cchhhHHHHhhhccc---------------------CCCCCCChHHHHHHHHHHHHHhcChH-HHHHHHHHHHHHHHHHH
Q 014724 331 VLGVELESAINNAVF---------------------PGLQGGPHNHTIGGLAVCLKHAQSPE-FKVYQNKVVSNCRALAS 388 (419)
Q Consensus 331 ~~~~~l~~~i~~~~~---------------------~~~~g~p~~~~iaala~al~~~~~~~-~~~~~~~v~~n~~~l~~ 388 (419)
+.+.+..... ....++++...++++..+++.+...+ +++..+++.++++++.+
T Consensus 237 -----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~~~~~l~~ 311 (390)
T 1elu_A 237 -----CLGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWR 311 (390)
T ss_dssp -----TGGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred -----hHhhcCCccccCCcccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 4444332110 01124455555555556666554333 67888999999999999
Q ss_pred HHHhC-CcEEecC-CCcceeEEEEeC
Q 014724 389 RLVEL-GYKLVSG-GSDNHLVLVDLR 412 (419)
Q Consensus 389 ~L~~~-G~~v~~~-~t~~hlv~vd~~ 412 (419)
.|++. |++++.. ....+++++++.
T Consensus 312 ~L~~~~g~~~~~~~~~~~~~~~~~~~ 337 (390)
T 1elu_A 312 GLNQLPHVHCLATSAPQAGLVSFTVD 337 (390)
T ss_dssp HHHHSTTEEESCSSCCSSSEEEEEEC
T ss_pred HHHhcCCcEEecCccccccEEEEEcC
Confidence 99997 9988742 235567777874
No 65
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.89 E-value=4.6e-22 Score=196.86 Aligned_cols=275 Identities=14% Similarity=0.137 Sum_probs=186.1
Q ss_pred CCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHcc-
Q 014724 111 ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL- 189 (419)
Q Consensus 111 en~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all- 189 (419)
...+++.|++++.+.+.+.+ +++.+.|..+... ....+.+++++++++|++++ ..+++++|++|+.+++.++.
T Consensus 9 ~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~l~~~la~~~g~~~~---~v~~~~g~t~a~~~~~~~l~~ 82 (382)
T 4eb5_A 9 AKPVDERILEAMLPYMTESF--GNPSSVHSYGFKA-REAVQEAREKVAKLVNGGGG---TVVFTSGATEANNLAIIGYAM 82 (382)
T ss_dssp CCCCCHHHHHHHHHHHHTSC--CCTTCSSHHHHHH-HHHHHHHHHHHHHHHTCTTE---EEEEESSHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhcc--CCCCCCcHHHHHH-HHHHHHHHHHHHHHhCCCCC---eEEEcCchHHHHHHHHHHHHh
Confidence 34689999999999886533 3444333322222 23334567889999998753 22455567889999999998
Q ss_pred ---CCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--
Q 014724 190 ---KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR-- 264 (419)
Q Consensus 190 ---~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~-- 264 (419)
+|||+|++++++|.++.... ..+...|. +++.++++ +++.+|+++|++.+++ ++++|++++++||+
T Consensus 83 ~~~~~gd~Vl~~~~~~~~~~~~~-----~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~-~~~~v~~~~~~nptG~ 153 (382)
T 4eb5_A 83 RNARKGKHILVSAVEHMSVINPA-----KFLQKQGF--EVEYIPVG-KYGEVDVSFIDQKLRD-DTILVSVQHANNEIGT 153 (382)
T ss_dssp HHGGGCCEEEEETTCCHHHHHHH-----HHHTTTTC--EEEEECBC-TTSCBCHHHHHHHCCT-TEEEEECCSBCTTTCB
T ss_pred hccCCCCEEEECCCcchHHHHHH-----HHHHhCCc--EEEEeccC-CCCccCHHHHHHHhcC-CCeEEEEeccCCCccc
Confidence 89999999999886653211 01112354 55555565 3678999999999875 78999999888874
Q ss_pred cCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcCCCCCe-eEEEEeCCCcchhhHHHHhh
Q 014724 265 DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAIN 341 (419)
Q Consensus 265 ~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~ 341 (419)
..|+++|.++|++||++ |+|++|..|.. +.++. +.|++++|+||++ ||.| |+++++++. .+...+.
T Consensus 154 ~~~l~~i~~l~~~~~~~-i~D~a~~~g~~-----~~~~~~~~~di~~~s~sK~~-g~~g~G~~~~~~~~----~l~~~~~ 222 (382)
T 4eb5_A 154 IQPVEEISEVLAGKAAL-HIDATASVGQI-----EVDVEKIGADMLTISSNDIY-GPKGVGALWIRKEA----KLQPVIL 222 (382)
T ss_dssp BCCHHHHHHHHTTSSEE-EEECTTTBTTB-----CCCHHHHTCSEEEEETGGGT-CCSSCEEEEEETTC----CCCCSSC
T ss_pred cCCHHHHHHHHHHCCCE-EEEcchhcCCc-----ccCccccCCCEEEeehHHhc-CCCceEEEEEcccc----ccCceec
Confidence 67999999999999999 99999875522 11222 6799999999974 6764 888888741 0111010
Q ss_pred h--cccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEEecCC--CcceeEEEEeC
Q 014724 342 N--AVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGG--SDNHLVLVDLR 412 (419)
Q Consensus 342 ~--~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~~~~--t~~hlv~vd~~ 412 (419)
. .......++++...++++..+++... +++++..+++.++++++.+.|++. |+++.... ...+++++.+.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (382)
T 4eb5_A 223 GGGQENGLRSGSENVPSIVGFGKAAEITA-MEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFS 297 (382)
T ss_dssp SSCTGGGTSCSCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEET
T ss_pred CCCccccccCCCccHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCcccCCCCEEEEEeC
Confidence 0 00001124455555666666676654 356788899999999999999987 88876421 11456777764
No 66
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.89 E-value=7.5e-23 Score=205.74 Aligned_cols=283 Identities=13% Similarity=0.079 Sum_probs=188.2
Q ss_pred hcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHH
Q 014724 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 180 (419)
Q Consensus 103 ~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A 180 (419)
+.|+|..+++. .++.|++++.+.+......+|+.. .| ..++++.+.+++++.+|.+.+.....+++++|++|
T Consensus 48 ~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~---~g---~~~lr~~ia~~~~~~~g~~~~~~~~v~~t~G~~~a 121 (404)
T 2o1b_A 48 PLINMAVGIPDGPTPQGIIDHFQKALTIPENQKYGAF---HG---KEAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKNG 121 (404)
T ss_dssp CCEECCCCSCSSCCCHHHHHHHHHHTTCHHHHSCCCT---TC---CHHHHHHHHHHHHHHHCCCCCTTTSEEEESSHHHH
T ss_pred CEEecCCcCCCCCCCHHHHHHHHHHHhCCCCCCCCCC---CC---CHHHHHHHHHHHHHHhCCCCCCcccEEEcCCcHHH
Confidence 35788877754 579999999887743211134321 12 23677677777777779762100012444455789
Q ss_pred HHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCC
Q 014724 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS 260 (419)
Q Consensus 181 ~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s 260 (419)
+..++.++++|||+|++.+|.|.++.. .+...|. +++.++.+++++.+|+++|++.++. ++++|+++++
T Consensus 122 l~~~~~~l~~~gd~Vl~~~p~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p 190 (404)
T 2o1b_A 122 LVAVPTCVINPGDYVLLPDPGYTDYLA--------GVLLADG--KPVPLNLEPPHYLPDWSKVDSQIID-KTKLIYLTYP 190 (404)
T ss_dssp HHHHHHHHCCTTCEEEEEESCCSSHHH--------HHHHTTC--EEEEEECCTTTCCCCGGGSCHHHHH-HEEEEEECSS
T ss_pred HHHHHHHhcCCCCEEEEcCCCchhHHH--------HHHHCCC--EEEEeccCcccCcCCHHHHHHhhcc-CceEEEEcCC
Confidence 999999999999999999998877542 2234455 4445555543456899999998864 7899999888
Q ss_pred CCCC--cC---ChHHHHHHHHHhCCEEEEeccccccccccCCcCCC--CC---CCcEEEeCCCCcC--CCCCeeEEEEeC
Q 014724 261 AYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADP--FK---YCDVVTTTTHKSL--RGPRGGMIFFKK 328 (419)
Q Consensus 261 ~~p~--~~---dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~--~~---~~Div~~S~hK~l--~GprgG~i~~~~ 328 (419)
+||+ .. ++++|+++|+++|++||+|++|.. +.+.+...+. +. +.+++++|+||+| +|+|.|++++++
T Consensus 191 ~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~-~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~ 269 (404)
T 2o1b_A 191 NNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGA-FGFDAKNPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAVGNK 269 (404)
T ss_dssp CTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTT-CBSSSCCCCGGGSTTHHHHEEEEEESTTTTTCGGGCCEEEEECH
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchh-cccCCCCCChhhcCCCCCCEEEEEecchhccCchhheEeEecCH
Confidence 8874 33 478899999999999999999754 3332321111 11 3468999999998 577889999876
Q ss_pred CCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeEE
Q 014724 329 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVL 408 (419)
Q Consensus 329 ~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~ 408 (419)
++.+.+......... +++....+++..++... ...+++..+++.++++++.+.|++.|+++..+ ..+.++|
T Consensus 270 ------~~~~~l~~~~~~~~~-~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~g~~~~ 340 (404)
T 2o1b_A 270 ------DMIQALKKYQTHTNA-GMFGALQDAAIYALNHY-DDFLEEQSNVFKTRRDRFEAMLAKADLPFVHA-KGGIYVW 340 (404)
T ss_dssp ------HHHHHHHHHHHHHCC-CCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHTTCCEECC-CBSSEEE
T ss_pred ------HHHHHHHHHHhhccC-CCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHhcCCeecCC-CcceEEE
Confidence 566666543221111 23333344444455543 23457778888999999999999989887653 2345688
Q ss_pred EEeC
Q 014724 409 VDLR 412 (419)
Q Consensus 409 vd~~ 412 (419)
+++.
T Consensus 341 ~~~~ 344 (404)
T 2o1b_A 341 LETP 344 (404)
T ss_dssp EECC
T ss_pred EeCC
Confidence 8885
No 67
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.89 E-value=1.1e-22 Score=203.02 Aligned_cols=273 Identities=17% Similarity=0.136 Sum_probs=180.0
Q ss_pred hhcccccccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHH
Q 014724 102 FKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPAN 181 (419)
Q Consensus 102 ~~~i~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~ 181 (419)
.+.++|..++..+++.+++++.+.+...+ |+ ...+...+++ +.+++++|.+. .++++||++|+
T Consensus 22 ~~~~~l~~~~p~~~~~~~~a~~~~~~~~~---~~-----~~~~~~~~l~----~~la~~~~~~~-----~i~~~~gt~al 84 (391)
T 3dr4_A 22 SDLPRISVAAPRLDGNERDYVLECMDTTW---IS-----SVGRFIVEFE----KAFADYCGVKH-----AIACNNGTTAL 84 (391)
T ss_dssp ------CCCCCCCCSSHHHHHHHHHHHTC---CS-----SCSHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHH
T ss_pred CCCceeccCCCCCCHHHHHHHHHHHHcCC---cc-----CCChHHHHHH----HHHHHHhCCCc-----EEEeCCHHHHH
Confidence 44566666776778899999988775432 11 0123334444 67888888874 37788999999
Q ss_pred HHHHHHc-cCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCC
Q 014724 182 FEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS 260 (419)
Q Consensus 182 ~~~~~al-l~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s 260 (419)
..++.++ +++||+|++++++|.++.. .+...|. +++.++++++++.+|+++|++.+++ ++++|++++
T Consensus 85 ~~~l~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~--~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~v~~~n- 152 (391)
T 3dr4_A 85 HLALVAMGIGPGDEVIVPSLTYIASAN--------SVTYCGA--TPVLVDNDPRTFNLDAAKLEALITP-RTKAIMPVH- 152 (391)
T ss_dssp HHHHHHHTCCTTCEEEEESSSCTHHHH--------HHHHTTC--EEEEECBCTTTCSBCGGGSGGGCCT-TEEEECCBC-
T ss_pred HHHHHHcCCCCcCEEEECCCchHHHHH--------HHHHCCC--EEEEEecCccccCcCHHHHHHhcCC-CceEEEEEC-
Confidence 9999999 9999999999998877642 2234454 5556666656789999999999874 788888654
Q ss_pred CCCCcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCCCCcEEEeC--CCCcCCCCCeeEEEEeCCCcchhhHHH
Q 014724 261 AYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTT--THKSLRGPRGGMIFFKKDPVLGVELES 338 (419)
Q Consensus 261 ~~p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~~~Div~~S--~hK~l~GprgG~i~~~~~~~~~~~l~~ 338 (419)
.++...|+++|.++|+++|++||+|++|..|....+..... ..|+++.| .||+++|++||+++++++ ++.+
T Consensus 153 ~tG~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~--~~di~~~S~s~~K~l~~g~gg~~~~~~~-----~~~~ 225 (391)
T 3dr4_A 153 LYGQICDMDPILEVARRHNLLVIEDAAEAVGATYRGKKSGS--LGDCATFSFFGNAIITTGEGGMITTNDD-----DLAA 225 (391)
T ss_dssp GGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTS--SSSEEEEECBTTSSSCCBSCEEEEESCH-----HHHH
T ss_pred CCCChhhHHHHHHHHHHcCCEEEEECcccccceECCeeecc--cCCEEEEECCCCCcCCcCCeEEEEECCH-----HHHH
Confidence 23456799999999999999999999998776644321111 23666666 669998888999988874 4555
Q ss_pred HhhhcccCCCC----------CC-ChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecC------C
Q 014724 339 AINNAVFPGLQ----------GG-PHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSG------G 401 (419)
Q Consensus 339 ~i~~~~~~~~~----------g~-p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~------~ 401 (419)
.+......+.. |. .....+.+ +.++... .+++++.++..++++++.+.|.+.|+++... .
T Consensus 226 ~~~~~~~~g~~~~~~~~~~~~g~~~~~~~l~a-a~~~~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~ 302 (391)
T 3dr4_A 226 KMRLLRGQGMDPNRRYWFPIVGFNYRMTNIQA-AIGLAQL--ERVDEHLAARERVVGWYEQKLARLGNRVTKPHVALTGR 302 (391)
T ss_dssp HHHHHHBTTCCTTSTTCCSSCCCBCBCCHHHH-HHHHHHH--HTHHHHHHHHHHHHHHHHHHHGGGTTSEECCCCCTTSC
T ss_pred HHHHHHhcCCCCCCcccccccccccCCCHHHH-HHHHHHH--HHHHHHHHHHHHHHHHHHHHhhcCCccccCcCCCCCCc
Confidence 54332211110 10 11111211 1122222 3467788888999999999999888877643 1
Q ss_pred CcceeEEEEeCC
Q 014724 402 SDNHLVLVDLRP 413 (419)
Q Consensus 402 t~~hlv~vd~~~ 413 (419)
...|++++.+..
T Consensus 303 ~~~~~~~i~~~~ 314 (391)
T 3dr4_A 303 HVFWMYTVRLGE 314 (391)
T ss_dssp CCCSSEEEEECS
T ss_pred ceeEEEEEEECC
Confidence 233456776643
No 68
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.89 E-value=5.2e-22 Score=198.49 Aligned_cols=274 Identities=16% Similarity=0.215 Sum_probs=187.6
Q ss_pred hcccccccCC--C-ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHH
Q 014724 103 KSLELIASEN--F-TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP 179 (419)
Q Consensus 103 ~~i~L~~sen--~-~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~ 179 (419)
..|+|..+++ + .++.+++++.+.+.. +..++.+.++..|.. ++.+.+++++++++|.+. .+++++|++
T Consensus 44 ~~idl~~~~~~~~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~g~~---~~~~~l~~~la~~~g~~~-----v~~~~ggt~ 114 (398)
T 3a2b_A 44 RVLMFGSNSYLGLTTDTRIIKAAQDALEK-YGTGCAGSRFLNGTL---DIHVELEEKLSAYVGKEA-----AILFSTGFQ 114 (398)
T ss_dssp EEEECSCSCTTCGGGCHHHHHHHHHHHHH-HCSCCCSBTTTTCCC---HHHHHHHHHHHHHHTCSE-----EEEESSHHH
T ss_pred eEEEeecccccCCCCCHHHHHHHHHHHHH-cCCCCCCcCcccCCc---HHHHHHHHHHHHHhCCCc-----EEEECCHHH
Confidence 4567777654 3 679999999887753 222333222223322 333455688889999752 366778899
Q ss_pred HHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhc---CCeEEE
Q 014724 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF---RPKLII 256 (419)
Q Consensus 180 A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~---~pklIi 256 (419)
|+..++.++++|||+|++.+|.|+++.. .+...|. +++.++. +|+++|++.+++. ++++|+
T Consensus 115 a~~~~~~~~~~~gd~V~~~~p~~~~~~~--------~~~~~g~--~~~~v~~------~d~~~l~~~l~~~~~~~~~~v~ 178 (398)
T 3a2b_A 115 SNLGPLSCLMGRNDYILLDERDHASIID--------GSRLSFS--KVIKYGH------NNMEDLRAKLSRLPEDSAKLIC 178 (398)
T ss_dssp HHHHHHHHSSCTTCEEEEETTCCHHHHH--------HHHHSSS--EEEEECT------TCHHHHHHHHHTSCSSSCEEEE
T ss_pred HHHHHHHHHhCCCCEEEECCccCHHHHH--------HHHHcCC--ceEEeCC------CCHHHHHHHHHhhccCCceEEE
Confidence 9999999999999999999998877642 2334555 4455432 6899999998764 689999
Q ss_pred EcCCCCCC--cCChHHHHHHHHHhCCEEEEecccccccccc-CCcC-C--CCC-CCcEEEeCCCCcCCCCCeeEEEEeCC
Q 014724 257 AGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAA-SVVA-D--PFK-YCDVVTTTTHKSLRGPRGGMIFFKKD 329 (419)
Q Consensus 257 ~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~-g~~~-~--~~~-~~Div~~S~hK~l~GprgG~i~~~~~ 329 (419)
+++++||+ ..++++|.++|++||++||+|++|..|.... +... . .+. ++|++++|+||+|. |.||++++++
T Consensus 179 ~~~~~nptG~~~~~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~-~~GG~~~~~~- 256 (398)
T 3a2b_A 179 TDGIFSMEGDIVNLPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLA-SLGGFVAGDA- 256 (398)
T ss_dssp EESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTC-SSCEEEEECH-
T ss_pred EeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEeccccccc-CCCcEEEeCH-
Confidence 99888874 6789999999999999999999986553311 1100 0 011 36999999999984 6679999987
Q ss_pred CcchhhHHHHhhhcccC-CCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeEE
Q 014724 330 PVLGVELESAINNAVFP-GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVL 408 (419)
Q Consensus 330 ~~~~~~l~~~i~~~~~~-~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~ 408 (419)
++.+.+.....+ ...++++....+++..+++.. .+.++..+++.++++++.+.|++.|+++..+ +.+++|
T Consensus 257 -----~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~--~g~~~~ 327 (398)
T 3a2b_A 257 -----DVIDFLKHNARSVMFSASMTPASVASTLKALEII--QNEPEHIEKLWKNTDYAKAQLLDHGFDLGAT--ESPILP 327 (398)
T ss_dssp -----HHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHH--HHCTHHHHHHHHHHHHHHHHHHHTTCCBCSC--CSSEEE
T ss_pred -----HHHHHHHHhcccceecCCCCHHHHHHHHHHHHHH--hhCHHHHHHHHHHHHHHHHHHHhcCCCcCCC--CCCEEE
Confidence 566665542111 112233333343444456553 2345677888899999999999999887643 357888
Q ss_pred EEeC
Q 014724 409 VDLR 412 (419)
Q Consensus 409 vd~~ 412 (419)
+++.
T Consensus 328 ~~~~ 331 (398)
T 3a2b_A 328 IFIR 331 (398)
T ss_dssp EECC
T ss_pred EEcC
Confidence 8874
No 69
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.89 E-value=3.7e-22 Score=197.58 Aligned_cols=275 Identities=13% Similarity=0.045 Sum_probs=184.5
Q ss_pred hhcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHH
Q 014724 102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP 179 (419)
Q Consensus 102 ~~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~ 179 (419)
++.|+|..+++. .++.+++++.+.+... ..+|+.. .| ..++++.+.+++.+.+|.+.+.. ..+++++|++
T Consensus 29 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~---~~---~~~l~~~la~~~~~~~g~~~~~~-~v~~~~g~~~ 100 (370)
T 2z61_A 29 KKVIHLEIGEPDFNTPKPIVDEGIKSLKEG-KTHYTDS---RG---ILELREKISELYKDKYKADIIPD-NIIITGGSSL 100 (370)
T ss_dssp CCCEECCCCSCSSCCCHHHHHHHHHHHHTT-CCSCCCT---TC---CHHHHHHHHHHHHHHSSCCCCGG-GEEEESSHHH
T ss_pred CCEEEccCCCCCCCCCHHHHHHHHHHHHcC-ccCCCCC---CC---CHHHHHHHHHHHHHHhCCCCChh-hEEECCChHH
Confidence 356788877753 5789999998887542 1234321 12 23677777777777777543211 2245556688
Q ss_pred HHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcC
Q 014724 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 259 (419)
Q Consensus 180 A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~ 259 (419)
|+..++.++++|||+|++.+|.|.++.. .+...|. +++.++ +|+++|++.+++ ++++|++++
T Consensus 101 a~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~--~~~~v~-------~d~~~l~~~l~~-~~~~v~~~~ 162 (370)
T 2z61_A 101 GLFFALSSIIDDGDEVLIQNPCYPCYKN--------FIRFLGA--KPVFCD-------FTVESLEEALSD-KTKAIIINS 162 (370)
T ss_dssp HHHHHHHHHCCTTCEEEEESSCCTHHHH--------HHHHTTC--EEEEEC-------SSHHHHHHHCCS-SEEEEEEES
T ss_pred HHHHHHHHhcCCCCEEEEeCCCchhHHH--------HHHHcCC--EEEEeC-------CCHHHHHHhccc-CceEEEEcC
Confidence 9999999999999999999998877532 1233454 444432 789999999875 789998888
Q ss_pred CCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcCC--CC---CCCcEEEeCCCCcC--CCCCeeEEEEeCCC
Q 014724 260 SAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PF---KYCDVVTTTTHKSL--RGPRGGMIFFKKDP 330 (419)
Q Consensus 260 s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~--~~---~~~Div~~S~hK~l--~GprgG~i~~~~~~ 330 (419)
++||+ ..+.+ |.++|++||++||+|++|..+ ...+...+ .+ .+.|++++|+||++ +|.|.|++++++
T Consensus 163 p~nptG~~~~~~-l~~~~~~~~~~li~De~~~~~-~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~-- 238 (370)
T 2z61_A 163 PSNPLGEVIDRE-IYEFAYENIPYIISDEIYNGL-VYEGKCYSAIEFDENLEKTILINGFSKLYAMTGWRIGYVISND-- 238 (370)
T ss_dssp SCTTTCCCCCHH-HHHHHHHHCSEEEEECTTTTC-BSSSCCCCGGGTCTTCSSEEEEEESTTTTTCGGGCCEEEECCH--
T ss_pred CCCCcCcccCHH-HHHHHHHcCCEEEEEcchhhc-ccCCCCcCHHHccCCCCcEEEEecChhccCCccceEEEEEECH--
Confidence 88874 67888 999999999999999998643 33222111 12 15689999999998 567789999987
Q ss_pred cchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeEEEE
Q 014724 331 VLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVD 410 (419)
Q Consensus 331 ~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~vd 410 (419)
++.+.+......... +++....+++..+++......+++..+++.++++++.+.|++.|+++..+ ..++++|++
T Consensus 239 ----~~~~~~~~~~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~~ 312 (370)
T 2z61_A 239 ----EIIEAILKLQQNLFI-SAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDFGWEVNNP-IGAYYVFPN 312 (370)
T ss_dssp ----HHHHHHHHHHHHHTS-SSCHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCBCCCC-CBTTEECCB
T ss_pred ----HHHHHHHHHHhhccc-CCCHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHcCCeecCC-CcceEEEEe
Confidence 566665543222212 22333333333344331123456778888999999999999989887642 335667777
Q ss_pred eC
Q 014724 411 LR 412 (419)
Q Consensus 411 ~~ 412 (419)
+.
T Consensus 313 ~~ 314 (370)
T 2z61_A 313 IG 314 (370)
T ss_dssp CS
T ss_pred cC
Confidence 64
No 70
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.89 E-value=1.7e-21 Score=192.70 Aligned_cols=275 Identities=17% Similarity=0.152 Sum_probs=184.3
Q ss_pred CCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHcc--
Q 014724 112 NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL-- 189 (419)
Q Consensus 112 n~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all-- 189 (419)
..+++.|++++.+.+.+.|. .+...+..+... ......+++++++++|++++ ..+++++|++|+..++.++.
T Consensus 11 ~~~~~~v~~a~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~l~~~la~~~g~~~~---~v~~~~g~t~a~~~~~~~~~~~ 84 (384)
T 1eg5_A 11 TRVDDRVLEEMIVFYREKYG--NPNSAHGMGIEA-NLHMEKAREKVAKVLGVSPS---EIFFTSCATESINWILKTVAET 84 (384)
T ss_dssp CCCCHHHHHHHHHHHHTCCC--CTTCSSHHHHHH-HHHHHHHHHHHHHHHTSCGG---GEEEESCHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcCC--CCccccHHHHHH-HHHHHHHHHHHHHHcCCCCC---eEEEECCHHHHHHHHHHhhhhh
Confidence 46899999999998876542 232212112111 22333466889999998764 12455567889999999997
Q ss_pred --CCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--c
Q 014724 190 --KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--D 265 (419)
Q Consensus 190 --~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~ 265 (419)
+|||+|+++++.|.++.... ..+...|. +++.++.+ +++.+|+++|++.+++ ++++|++++++||+ .
T Consensus 85 ~~~~gd~vl~~~~~~~~~~~~~-----~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~-~~~~v~~~~~~nptG~~ 155 (384)
T 1eg5_A 85 FEKRKRTIITTPIEHKAVLETM-----KYLSMKGF--KVKYVPVD-SRGVVKLEELEKLVDE-DTFLVSIMAANNEVGTI 155 (384)
T ss_dssp TTTTCCEEEECTTSCHHHHHHH-----HHHHHTTC--EEEECCBC-TTSCBCHHHHHHHCCT-TEEEEEEESBCTTTCBB
T ss_pred ccCCCCEEEECCCCchHHHHHH-----HHHHhcCC--EEEEEccC-CCCccCHHHHHHHhCC-CCeEEEEECCCCCcccc
Confidence 89999999998876653211 01123454 55556565 3678999999999975 78999998888874 6
Q ss_pred CChHHHHHHHHHhC--CEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcCCCCCe-eEEEEeCCCcchhhHHHHh
Q 014724 266 FDYPRMRQIADAVG--ALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAI 340 (419)
Q Consensus 266 ~dl~~I~~ia~~~g--a~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i 340 (419)
.|+++|.++|+++| ++||+|++|..|.. +..+. +.|++++|+||++ ||.| |+++++++. .+...+
T Consensus 156 ~~~~~i~~l~~~~~~~~~li~Dea~~~~~~-----~~~~~~~~~di~~~s~sK~~-g~~G~G~~~~~~~~----~~~~~~ 225 (384)
T 1eg5_A 156 QPVEDVTRIVKKKNKETLVHVDAVQTIGKI-----PFSLEKLEVDYASFSAHKFH-GPKGVGITYIRKGV----PIRPLI 225 (384)
T ss_dssp CCHHHHHHHHHHHCTTCEEEEECTTTTTTS-----CCCCTTTCCSEEEEEGGGGT-SCTTCEEEEECTTS----CCCCSB
T ss_pred cCHHHHHHHHHhcCCceEEEEEhhhhcCCc-----ccCchhcCCCEEEecHHHhc-CCCceEEEEEcCCC----cccccc
Confidence 78999999999999 99999999875432 11232 5899999999975 6665 999998741 011111
Q ss_pred hhcc--cCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCC--CcceeEEEEeC
Q 014724 341 NNAV--FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGG--SDNHLVLVDLR 412 (419)
Q Consensus 341 ~~~~--~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~--t~~hlv~vd~~ 412 (419)
.... .....++++...++++..+++... +++++..+++.++++++.+.|++.|+++.... ...+.+++.+.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~ 300 (384)
T 1eg5_A 226 HGGGQERGLRSGTQNVPGIVGAARAMEIAV-EELSEAAKHMEKLRSKLVSGLMNLGAHIITPLEISLPNTLSVSFP 300 (384)
T ss_dssp CSSCTTTTTBCSCCCHHHHHHHHHHHHHHH-HTHHHHHHHHHHHHHHHHHHHHTTTCEECSCTTSBCTTEEEEECT
T ss_pred ccCcccccccCCCCChHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHhCCCCeEEeCCcccCCCCEEEEEeC
Confidence 1100 001223455555555566676643 35678889999999999999998899876421 12344555553
No 71
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.89 E-value=1.9e-21 Score=189.57 Aligned_cols=266 Identities=17% Similarity=0.213 Sum_probs=181.7
Q ss_pred HHHhhhcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecC
Q 014724 98 KERQFKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPL 175 (419)
Q Consensus 98 ~~r~~~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~ 175 (419)
....++.|.|..++|+ +++.|++++.+.+.. + .+||. ....++ ++.+++++|++++ +|+++
T Consensus 12 ~~~~~~~i~l~~n~~~~~~~~~v~~a~~~~~~~-~-~~y~~-------~~~~~l----r~~la~~~~~~~~----~i~~t 74 (337)
T 3p1t_A 12 VRAAAQAVCLAFNENPEAVEPRVQAAIAAAAAR-I-NRYPF-------DAEPRV----MRKLAEHFSCPED----NLMLV 74 (337)
T ss_dssp --CCCCCEECSSCCCCSCCCHHHHHHHHHHGGG-T-TSCCT-------THHHHH----HHHHHHHHTSCGG----GEEEE
T ss_pred ccCCCCceEeeCCCCCCCCCHHHHHHHHHhhhh-h-ccCCC-------CchHHH----HHHHHHHhCcCHH----HEEEe
Confidence 3334667999999876 589999999887643 1 23432 222344 4677888898764 36666
Q ss_pred Ch-HHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeE
Q 014724 176 SG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKL 254 (419)
Q Consensus 176 sG-t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pkl 254 (419)
+| ++++..++.++ |||+|++.+|.|.++.. .+...|. ++++++.+ +++.+|++++++. .++++
T Consensus 75 ~G~~~~l~~~~~~~--~gd~vl~~~p~~~~~~~--------~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~---~~~~~ 138 (337)
T 3p1t_A 75 RGIDECFDRISAEF--SSMRFVTAWPGFDGYRA--------RIAVSGL--RHFEIGLT-DDLLLDPNDLAQV---SRDDC 138 (337)
T ss_dssp SHHHHHHHHHHHHS--TTSEEEEESSSCSHHHH--------HHTTSCC--EEEEECBC-TTSSBCHHHHTTC---CTTEE
T ss_pred CCHHHHHHHHHHhc--CCCeEEEeCCCcHHHHH--------HHHHcCC--EEEEecCC-CCCCCCHHHHHhh---cCCCE
Confidence 66 56888888877 99999999998877542 2334555 55555555 3578999999875 36899
Q ss_pred EEEcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCCCCcEEEeCCCCcC--CCCCeeEEEEeCCC
Q 014724 255 IIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSL--RGPRGGMIFFKKDP 330 (419)
Q Consensus 255 Ii~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~~~Div~~S~hK~l--~GprgG~i~~~~~~ 330 (419)
|++++++||+ ..|++++.++|+++++ +++|++|. ++...+.........+++++|+||+| +|+|.|+++.++
T Consensus 139 v~i~~p~nptG~~~~~~~l~~l~~~~~~-~ivDea~~-~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~-- 214 (337)
T 3p1t_A 139 VVLANPSNPTGQALSAGELDQLRQRAGK-LLIDETYV-DYSSFRARGLAYGENELVFRSFSKSYGLAGLRLGALFGPS-- 214 (337)
T ss_dssp EEEESSCTTTCCCCCHHHHHHHHHHCSE-EEEECTTG-GGSSCSSSCCCCBTTEEEEEESSSTTCCTTTCCEEEECCH--
T ss_pred EEEeCCCCCCCCCCCHHHHHHHHHhCCc-EEEECCCh-hhccccccccccCCCEEEEeeCchhccCcchheEEEEeCH--
Confidence 9999999884 6799999999999997 56699974 33322211111125679999999998 588999999887
Q ss_pred cchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeEEEE
Q 014724 331 VLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVD 410 (419)
Q Consensus 331 ~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~vd 410 (419)
++.+.+.....++ +++...++++..+++.. ..+++..+++.++++++.+.|++.|+++..+ +..++|+.
T Consensus 215 ----~~~~~l~~~~~~~---~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~--~~~~~~~~ 283 (337)
T 3p1t_A 215 ----ELIAAMKRKQWFC---NVGTLDLHALEAALDND--RAREAHIAKTLAQRRRVADALRGLGYRVASS--EANFVLVE 283 (337)
T ss_dssp ----HHHHHHHTTSCTT---CSCHHHHHHHHHHHTCH--HHHHHHHHHHHHHHHHHHHHHHHTTCCBCCC--SSSEEEEE
T ss_pred ----HHHHHHHhhcCCC---CCCHHHHHHHHHHhCCH--HHHHHHHHHHHHHHHHHHHHHHHCcCEECCC--CCeEEEEE
Confidence 6777776543322 33333344444344321 2356777888888999999999999887653 34566665
Q ss_pred e
Q 014724 411 L 411 (419)
Q Consensus 411 ~ 411 (419)
.
T Consensus 284 ~ 284 (337)
T 3p1t_A 284 N 284 (337)
T ss_dssp C
T ss_pred c
Confidence 5
No 72
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.89 E-value=2.6e-22 Score=201.84 Aligned_cols=280 Identities=18% Similarity=0.105 Sum_probs=185.5
Q ss_pred hhcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHH
Q 014724 102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP 179 (419)
Q Consensus 102 ~~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~ 179 (419)
++.|+|..+++. .++.|++++ +.+.+. ..+|+.. .| ..++++.+.+++.+.+|.+.+.. ..+++++|++
T Consensus 43 ~~~i~l~~~~~~~~~~~~v~~a~-~~l~~~-~~~y~~~---~g---~~~l~~~la~~~~~~~g~~~~~~-~v~~~~g~t~ 113 (409)
T 2gb3_A 43 VRIHHLNIGQPDLKTPEVFFERI-YENKPE-VVYYSHS---AG---IWELREAFASYYKRRQRVDVKPE-NVLVTNGGSE 113 (409)
T ss_dssp CEEEECSSCCCCSCCCTHHHHHH-HHTCCS-SCCCCCT---TC---CHHHHHHHHHHHHHTSCCCCCGG-GEEEESHHHH
T ss_pred CCEEeccCCCCCCCCCHHHHHHH-HHHhcC-CCCCCCC---CC---cHHHHHHHHHHHHHHhCCCCCHH-HEEEeCCHHH
Confidence 456888877653 578999999 877532 2234321 11 24677677777777677543211 1244455688
Q ss_pred HHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCC-CCCCCCHHHHHHHhhhcCCeEEEEc
Q 014724 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKLIIAG 258 (419)
Q Consensus 180 A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~-~~~~iD~d~Le~~l~~~~pklIi~~ 258 (419)
|+..++.++++|||+|++++|.|.++.. .+...|. +++.++.++ +++.+ +++|++.+++ ++++|+++
T Consensus 114 a~~~~~~~~~~~gd~Vl~~~~~~~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~-~~~l~~~l~~-~~~~v~~~ 181 (409)
T 2gb3_A 114 AILFSFAVIANPGDEILVLEPFYANYNA--------FAKIAGV--KLIPVTRRMEEGFAI-PQNLESFINE-RTKGIVLS 181 (409)
T ss_dssp HHHHHHHHHCCTTCEEEEEESCCTHHHH--------HHHHHTC--EEEEEECCGGGTSCC-CTTGGGGCCT-TEEEEEEE
T ss_pred HHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHcCC--EEEEeccCCCCCCcc-HHHHHHhhCc-CCeEEEEC
Confidence 9999999999999999999998876532 2234455 444444543 23445 8889888865 78999988
Q ss_pred CCCCCC--c---CChHHHHHHHHHhCCEEEEeccccccccccCCcCCCC---CCCcEEEeCCCCcC--CCCCeeEEEEeC
Q 014724 259 ASAYPR--D---FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KYCDVVTTTTHKSL--RGPRGGMIFFKK 328 (419)
Q Consensus 259 ~s~~p~--~---~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~---~~~Div~~S~hK~l--~GprgG~i~~~~ 328 (419)
+++||+ . .++++|+++|+++|++||+|++|..+ ...+.....+ .+.|++++|+||+| +|.|.|++++++
T Consensus 182 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~-~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~ 260 (409)
T 2gb3_A 182 NPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEI-VFRGEFASALSIESDKVVVIDSVSKKFSACGARVGCLITRN 260 (409)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTC-BCSSCCCCGGGSCCTTEEEEEESTTTTTCGGGCCEEEECSC
T ss_pred CCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECccccc-ccCCCCCCccccCCCCEEEEecchhccCCccceEEEEEECc
Confidence 888874 2 25899999999999999999997643 3322211112 25689999999998 566789999887
Q ss_pred CCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEE-ecCCCcceeE
Q 014724 329 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKL-VSGGSDNHLV 407 (419)
Q Consensus 329 ~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v-~~~~t~~hlv 407 (419)
+ ++.+.+......+. +++....+++..+++.. ...+++..+++.++++++.+.|++.|+++ .. .....++
T Consensus 261 ~-----~l~~~l~~~~~~~~--~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~ 331 (409)
T 2gb3_A 261 E-----ELISHAMKLAQGRL--APPLLEQIGSVGLLNLD-DSFFDFVRETYRERVETVLKKLEEHGLKRFTK-PSGAFYI 331 (409)
T ss_dssp H-----HHHHHHHHHHHHSC--CCCHHHHHHHHHHHTCC-HHHHHHHHHHHHHHHHHHHHHHHHTTCCCBCC-CSBSSEE
T ss_pred H-----HHHHHHHHHHhccC--CCCHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHHcCceeeeC-CCeeEEE
Confidence 3 45555544322222 23333333444445331 23457778888999999999999989887 43 2345678
Q ss_pred EEEeC
Q 014724 408 LVDLR 412 (419)
Q Consensus 408 ~vd~~ 412 (419)
|+++.
T Consensus 332 ~~~~~ 336 (409)
T 2gb3_A 332 TAELP 336 (409)
T ss_dssp EEECS
T ss_pred EEEeC
Confidence 88875
No 73
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.89 E-value=8.2e-22 Score=199.28 Aligned_cols=285 Identities=16% Similarity=0.132 Sum_probs=192.1
Q ss_pred hhcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCC-hH
Q 014724 102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLS-GS 178 (419)
Q Consensus 102 ~~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~s-Gt 178 (419)
.+.|+|..+++. +++.|++++.+.+.+....+|+.. .| ..++++.+.+++.+.+|.+.+. .+|++++ |+
T Consensus 44 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~---~g---~~~lr~~la~~~~~~~g~~~~~--~~i~~t~g~t 115 (437)
T 3g0t_A 44 TKFCRMEMGVPGLPAPQIGIETEIQKLREGVASIYPNL---DG---LPELKQEASRFAKLFVNIDIPA--RACVPTVGSM 115 (437)
T ss_dssp CCCEECCCCSCCSCCCHHHHHHHHHHHHHTGGGSCCCT---TC---CHHHHHHHHHHHHHHHCCCCCG--GGEEEESHHH
T ss_pred CCEEeccCcCCCCCCCHHHHHHHHHHHhCCcCcCCCCC---CC---hHHHHHHHHHHHHHhhCCCCCc--ccEEEeCCHH
Confidence 456888887754 589999999888764321345431 12 2366666667777777755321 1344555 57
Q ss_pred HHHHHHHHHcc--CCCC--EEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeE
Q 014724 179 PANFEVYTAIL--KPHD--RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKL 254 (419)
Q Consensus 179 ~A~~~~~~all--~pGD--~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pkl 254 (419)
+|+..++.+++ +||| +|++.+|.|.++.. .+...|..+..++ ++++++.+|+++|++.++..++++
T Consensus 116 ~al~~~~~~l~~~~~gd~~~Vl~~~p~~~~~~~--------~~~~~g~~~~~v~--~~~~~~~~d~~~l~~~l~~~~~~~ 185 (437)
T 3g0t_A 116 QGCFVSFLVANRTHKNREYGTLFIDPGFNLNKL--------QCRILGQKFESFD--LFEYRGEKLREKLESYLQTGQFCS 185 (437)
T ss_dssp HHHHHHHHHHTTSCTTCSCCEEEEESCCHHHHH--------HHHHHTCCCEEEE--GGGGCTTHHHHHHHHHHTTTCCCE
T ss_pred HHHHHHHHHHhcCCCCCccEEEEeCCCcHhHHH--------HHHHcCCEEEEEe--ecCCCCccCHHHHHHHHhcCCceE
Confidence 89999999998 9999 99999998766531 2334565555555 444466899999999995568999
Q ss_pred EEEcCCCCCC--cC---ChHHHHHHHHHhCCEEEEeccccccccccCCcCC--------CC---CCCcEEEeCCCCcC--
Q 014724 255 IIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--------PF---KYCDVVTTTTHKSL-- 316 (419)
Q Consensus 255 Ii~~~s~~p~--~~---dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~--------~~---~~~Div~~S~hK~l-- 316 (419)
|++++|+||+ .. ++++|+++|++||++||+|++|. ++.+.+..+. .+ .+.+++++|+||++
T Consensus 186 v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~ 264 (437)
T 3g0t_A 186 IIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYF-GMDFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSY 264 (437)
T ss_dssp EEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTT-TCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSC
T ss_pred EEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchh-hcccCCCcCcccccchhhccCCCCCcEEEEEcCccCCCC
Confidence 9998889885 33 47889999999999999999975 3333221111 11 13458899999986
Q ss_pred CCCCeeEEEEeCCCcchhhHHH-H-----------------hhhcccCCCCCCChHHHHHHHHHHHHHhcC--hHHHHHH
Q 014724 317 RGPRGGMIFFKKDPVLGVELES-A-----------------INNAVFPGLQGGPHNHTIGGLAVCLKHAQS--PEFKVYQ 376 (419)
Q Consensus 317 ~GprgG~i~~~~~~~~~~~l~~-~-----------------i~~~~~~~~~g~p~~~~iaala~al~~~~~--~~~~~~~ 376 (419)
+|+|.|++++++ ++.+ . +........ .+++....+++..++..... ..+++..
T Consensus 265 ~G~r~G~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 337 (437)
T 3g0t_A 265 AGQRIGVLMISG------KLYEREYPDLEESFGRLRFGEALSSSALYALS-SGATHSAQWGMAAMLKACNDGEYNFRDSV 337 (437)
T ss_dssp GGGCCEEEEECH------HHHHCBCGGGHHHHSCSBHHHHHHTTHHHHHH-SSSCHHHHHHHHHHHHHHHTTSCCHHHHH
T ss_pred ccceeEEEEECH------HHhhhhhhcccccccccchhHHHHHHHHhhhc-CCCCHHHHHHHHHHHhCcHhHHHHHHHHH
Confidence 677889999987 5655 4 433221111 12333334444445555321 1167888
Q ss_pred HHHHHHHHHHHHHHHhCCcEEe------cCCCcceeEEEEeC
Q 014724 377 NKVVSNCRALASRLVELGYKLV------SGGSDNHLVLVDLR 412 (419)
Q Consensus 377 ~~v~~n~~~l~~~L~~~G~~v~------~~~t~~hlv~vd~~ 412 (419)
+++.++++++.+.|++.|+++. ......+++|+++.
T Consensus 338 ~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 379 (437)
T 3g0t_A 338 IEYGRKARIMKKMFLDNGFNIVYDKDGNEPLADGFYFTVGYK 379 (437)
T ss_dssp HHHHHHHHHHHHHHHTTTEEESSCEETTEECCSSSEEEEEET
T ss_pred HHHHHHHHHHHHHHHHcCCEEeccccCCCCCceeEEEEEecC
Confidence 9999999999999999999887 22245678899886
No 74
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.89 E-value=2.2e-22 Score=201.30 Aligned_cols=283 Identities=12% Similarity=0.037 Sum_probs=186.9
Q ss_pred cccccccC-C--CChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHH
Q 014724 104 SLELIASE-N--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 180 (419)
Q Consensus 104 ~i~L~~se-n--~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A 180 (419)
.|+|..+. + ..++.|++++.+.+.+....+|+.. .|. .++++.+++++++++|.+.+.....+++++|++|
T Consensus 41 ~id~~~g~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~---~g~---~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a 114 (407)
T 3nra_A 41 PVDFSHGDVDAHEPTPGAFDLFSAGVQSGGVQAYTEY---RGD---LGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGA 114 (407)
T ss_dssp CEETTSCCTTTSCCCTTHHHHHHHHHHHTHHHHSCCT---TCC---HHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHH
T ss_pred eeeecCcCCCCCCCcHHHHHHHHHHHhcCCCCCcCCC---CCC---HHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHH
Confidence 46776543 3 3678999999888754211123221 122 2556667788999999853100012444556789
Q ss_pred HHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccC-----CCCCCCCHHHHHHHhhhcCCeEE
Q 014724 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD-----ESTGLVDYDMLEKTAILFRPKLI 255 (419)
Q Consensus 181 ~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~-----~~~~~iD~d~Le~~l~~~~pklI 255 (419)
+..++.+++++||+|++..|.|.++.. .+...|. ++++++++ ++++.+|+++|++.+++ ++++|
T Consensus 115 ~~~~~~~l~~~gd~vl~~~~~~~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v 183 (407)
T 3nra_A 115 LFLAVAATVARGDKVAIVQPDYFANRK--------LVEFFEG--EMVPVQLDYVSADETRAGLDLTGLEEAFKA-GARVF 183 (407)
T ss_dssp HHHHHHTTCCTTCEEEEEESCCTHHHH--------HHHHTTC--EEEEEEBCCCSSCCSSCCBCHHHHHHHHHT-TCCEE
T ss_pred HHHHHHHhCCCCCEEEEcCCcccchHH--------HHHHcCC--EEEEeecccccccCcCCCcCHHHHHHHHhh-CCcEE
Confidence 999999999999999999998876541 2334565 44444442 24678999999999976 88999
Q ss_pred EEcCCCCCC--cCC---hHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC-------CCcEEEeCCCCcC--CCCCe
Q 014724 256 IAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-------YCDVVTTTTHKSL--RGPRG 321 (419)
Q Consensus 256 i~~~s~~p~--~~d---l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~-------~~Div~~S~hK~l--~Gprg 321 (419)
++++|+||+ ..+ +++|+++|++||++||+|++|..+ .+.+....++. ..+++++|+||+| +|.|.
T Consensus 184 ~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~-~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~ 262 (407)
T 3nra_A 184 LFSNPNNPAGVVYSAEEIGQIAALAARYGATVIADQLYSRL-RYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRL 262 (407)
T ss_dssp EEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTS-BCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCC
T ss_pred EEcCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEcccccc-ccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeE
Confidence 988889875 445 899999999999999999997543 33322111111 3458999999997 57788
Q ss_pred eEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEEecC
Q 014724 322 GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSG 400 (419)
Q Consensus 322 G~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~~~ 400 (419)
|++++++ ++.+.+.........+++ ....+++..++.. ....+++..+++.+++++|.+.|++. |+++..+
T Consensus 263 G~~~~~~------~~~~~l~~~~~~~~~~~~-~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 334 (407)
T 3nra_A 263 GVAFGSR------AIIARMEKLQAIVSLRAA-GYSQAVLRGWFDE-APGWMEDRIARHQAIRDELLHVLRGCEGVFARTP 334 (407)
T ss_dssp EEEEECH------HHHHHHHHHHHHHTSSSC-HHHHGGGGGTTCC-CTTHHHHHHHHHHHHHHHHHHHHHTSTTCBCCCC
T ss_pred EEEEcCH------HHHHHHHHHHhhhccCCC-hHHHHHHHHHHhc-cchHHHHHHHHHHHHHHHHHHHHhcCCCceeccC
Confidence 9999876 666665543222222222 2222222222321 12345778888999999999999987 8887642
Q ss_pred CCcceeEEEEeCC
Q 014724 401 GSDNHLVLVDLRP 413 (419)
Q Consensus 401 ~t~~hlv~vd~~~ 413 (419)
...+++|+++..
T Consensus 335 -~~~~~~~~~~~~ 346 (407)
T 3nra_A 335 -QAGSYLFPRLPK 346 (407)
T ss_dssp -SBSSEECCBCCC
T ss_pred -CeeEEEEEeCCC
Confidence 345678888765
No 75
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.89 E-value=1.1e-21 Score=198.64 Aligned_cols=282 Identities=16% Similarity=0.122 Sum_probs=186.8
Q ss_pred hcccccccC-C-----CChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcC-----CCCCCCcee
Q 014724 103 KSLELIASE-N-----FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN-----LDENKWGVN 171 (419)
Q Consensus 103 ~~i~L~~se-n-----~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g-----~~~~~~~v~ 171 (419)
+.|+|..+. + ++++.|++++.+.+......+|+.. .| ..+++ +.++++++ ++.+ ..
T Consensus 55 ~~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~~~~~~y~~~---~g---~~~lr----~~la~~~~~~~~~~~~~---~v 121 (427)
T 3dyd_A 55 TMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPS---IG---FLSSR----EEIASYYHCPEAPLEAK---DV 121 (427)
T ss_dssp CCEECCCSCTTTTSSSCCCHHHHHHHHHHHHHCCSSSCCCT---TC---CHHHH----HHHHHHHCBTTBCCCGG---GE
T ss_pred CEEeCCCcCCCccCCCCCCHHHHHHHHHHHhcCcCCCCCCC---CC---cHHHH----HHHHHHHhhcCCCCChH---HE
Confidence 348887665 2 4689999999988765333344321 12 22444 45666666 4443 12
Q ss_pred EecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCC-CCCCCCHHHHHHHhhhc
Q 014724 172 VQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILF 250 (419)
Q Consensus 172 V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~-~~~~iD~d~Le~~l~~~ 250 (419)
+++++|++|+..++.++++|||+|++++|.|.++.. .+...|..+ +.+++++ +++.+|+++|++.+++
T Consensus 122 ~~t~g~t~al~~~~~~l~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~--~~~~~~~~~~~~~d~~~l~~~l~~- 190 (427)
T 3dyd_A 122 ILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKT--------LAESMGIEV--KLYNLLPEKSWEIDLKQLEYLIDE- 190 (427)
T ss_dssp EEESSHHHHHHHHHHHHCCTTCEEEEEESCCTHHHH--------HHHHTTCEE--EEEEEEGGGTTEECHHHHHSSCCT-
T ss_pred EEecCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHH--------HHHHcCCEE--EEEecccccCCCCCHHHHHHHhcc-
Confidence 555566889999999999999999999998876532 223456544 4444432 3568999999999875
Q ss_pred CCeEEEEcCCCCCC--cCC---hHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--CCc---EEEeCCCCcC--CC
Q 014724 251 RPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCD---VVTTTTHKSL--RG 318 (419)
Q Consensus 251 ~pklIi~~~s~~p~--~~d---l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~D---iv~~S~hK~l--~G 318 (419)
++++|++.+++||+ ..+ +++|+++|+++|+++|+|++| .++.+.+....++. ..+ ++++|+||+| +|
T Consensus 191 ~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay-~~~~~~g~~~~~~~~~~~~~~vi~~~S~sK~~~~~G 269 (427)
T 3dyd_A 191 KTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIY-GDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPG 269 (427)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTT-TTCBCSSCCCCCGGGGCSSCCEEEEEESTTTSSCGG
T ss_pred CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCc-hhhccCCCcCccHHHhCCCCcEEEEeeccccCCCcC
Confidence 68899998888885 456 899999999999999999996 45444332222221 222 6789999985 67
Q ss_pred CCeeEEEEeCCCcch-hhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcE
Q 014724 319 PRGGMIFFKKDPVLG-VELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYK 396 (419)
Q Consensus 319 prgG~i~~~~~~~~~-~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~ 396 (419)
+|.|+++++++.... .++.+.+....... .+++....+++..++.....+.+++..+++.++++++.+.|++. |++
T Consensus 270 ~riG~~~~~~~~~~~~~~i~~~l~~~~~~~--~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 347 (427)
T 3dyd_A 270 WRLGWILIHDRRDIFGNEIRDGLVKLSQRI--LGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAAIPGLR 347 (427)
T ss_dssp GCCEEEEEECSTTSSHHHHHHHHHHHHHHH--CCSCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHSTTEE
T ss_pred cceEEEEecCcchhhHHHHHHHHHHHHhcc--CCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhcCCCce
Confidence 888999988531100 13444443321111 13344445555556664333446788888999999999999997 888
Q ss_pred EecCCCcceeEEEEeC
Q 014724 397 LVSGGSDNHLVLVDLR 412 (419)
Q Consensus 397 v~~~~t~~hlv~vd~~ 412 (419)
+..+ ....++|+++.
T Consensus 348 ~~~p-~~g~~~~~~l~ 362 (427)
T 3dyd_A 348 PVRP-SGAMYLMVGIE 362 (427)
T ss_dssp EECC-SBTTEEEEEEC
T ss_pred ecCC-CeeEEEEEecC
Confidence 7642 34567887775
No 76
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.89 E-value=4e-22 Score=195.61 Aligned_cols=278 Identities=8% Similarity=-0.001 Sum_probs=186.3
Q ss_pred hcccccccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHH
Q 014724 103 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF 182 (419)
Q Consensus 103 ~~i~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~ 182 (419)
+.+++.+++..+++.|++++.+.+.+... ++.. .+..+. ++.+.+++++++++|.+..++ .+++.+|++|+.
T Consensus 4 ~~~~~~p~p~~~~~~v~~~~~~~~~~~~~-~~~~----~~~~~~-~~~~~~~~~la~~~g~~~~~~--v~~~~g~t~al~ 75 (362)
T 3ffr_A 4 NKIYFTPGPSELYPTVRQHMITALDEKIG-VISH----RSKKFE-EVYKTASDNLKTLLELPSNYE--VLFLASATEIWE 75 (362)
T ss_dssp CCEEECSSSCCCCTTHHHHHHHHHHTTTT-TSCT----TSHHHH-HHHHHHHHHHHHHTTCCTTEE--EEEESCHHHHHH
T ss_pred cceeccCCCcCCCHHHHHHHHHHhcCCcc-CcCC----CCHHHH-HHHHHHHHHHHHHhCCCCCcE--EEEeCCchHHHH
Confidence 35778889888999999888877754321 1111 122332 344467789999999864322 245566788999
Q ss_pred HHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC
Q 014724 183 EVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 262 (419)
Q Consensus 183 ~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~ 262 (419)
+++.++++| .+++..+++.++. +. ..+...|. +++.++.+ .++.+|+++|+ +. .++|+|++++++|
T Consensus 76 ~~~~~l~~~--~~i~~~~~~~~~~---~~---~~~~~~g~--~~~~v~~~-~~~~~d~~~l~--~~-~~~~~v~~~~~~n 141 (362)
T 3ffr_A 76 RIIQNCVEK--KSFHCVNGSFSKR---FY---EFAGELGR--EAYKEEAA-FGKGFYPADIT--VP-ADAEIICLTHNET 141 (362)
T ss_dssp HHHHHHCSS--EEEEEECSHHHHH---HH---HHHHHTTC--EEEEEECC-TTCCCCGGGCC--CC-TTCCEEEEESEET
T ss_pred HHHHhccCC--cEEEEcCcHHHHH---HH---HHHHHhCC--CeEEEecC-CCCCCCHHHHh--cc-CCccEEEEEcCCC
Confidence 999999988 4444443332211 10 11223455 44444444 35789999998 44 4899999998888
Q ss_pred CC--cCChHHHHHHHHHh-CCEEEEeccccccccccCCcCCCCCCCcEEEeCCCCcCCCCCe-eEEEEeCCCcchhhHHH
Q 014724 263 PR--DFDYPRMRQIADAV-GALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELES 338 (419)
Q Consensus 263 p~--~~dl~~I~~ia~~~-ga~livD~ah~~Gl~~~g~~~~~~~~~Div~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~ 338 (419)
|+ ..|+++|.++|++| |+++++|++|..|.. +.++..+|++++|+||+|.||.| |+++.++ ++.+
T Consensus 142 ptG~~~~l~~i~~la~~~p~~~li~D~a~~~~~~-----~~~~~~~d~~~~s~~K~~~~~~G~g~~~~~~------~~~~ 210 (362)
T 3ffr_A 142 SSGVSMPVEDINTFRDKNKDALIFVDAVSSLPYP-----KFDWTKIDSVFFSVQKCFGLPAGLGVWILND------RVIE 210 (362)
T ss_dssp TTTEECCHHHHTTSGGGSTTSEEEEECTTTTTSS-----CCCTTSCSEEEEETTSTTCCCSCCEEEEEEH------HHHH
T ss_pred CcceeCCHHHHHHHHHhCCCCEEEEecccccCCc-----ccChhHCcEEEEecccccCCCCceEEEEECH------HHHH
Confidence 74 67999999999999 999999999876532 12233489999999999986766 8888877 4544
Q ss_pred Hhhhccc--------------------CCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEE
Q 014724 339 AINNAVF--------------------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKL 397 (419)
Q Consensus 339 ~i~~~~~--------------------~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v 397 (419)
++..... ....++++...+.++..+++.+...+++++.+++.++++++.+.|++. |+++
T Consensus 211 ~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~ 290 (362)
T 3ffr_A 211 KSKALLAKRKSIGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAALINTYIESSKVFSF 290 (362)
T ss_dssp HHHHHHHTTCCCCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCSSEEE
T ss_pred HhhhccccCCCCcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccCcee
Confidence 4432211 111345556666666667765543446788899999999999999998 9988
Q ss_pred ec-CC--CcceeEEEEeCC
Q 014724 398 VS-GG--SDNHLVLVDLRP 413 (419)
Q Consensus 398 ~~-~~--t~~hlv~vd~~~ 413 (419)
.. .. ...+++++++..
T Consensus 291 ~~~~~~~~~~~~~~~~~~~ 309 (362)
T 3ffr_A 291 GVEDAKLRSMTTIVANTTM 309 (362)
T ss_dssp SSSCGGGBCSSEEEEEESS
T ss_pred ccCChhhcCCceEEEecCC
Confidence 75 21 234567777653
No 77
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.89 E-value=2.2e-21 Score=193.31 Aligned_cols=264 Identities=13% Similarity=0.107 Sum_probs=173.6
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHc-cCCC
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPH 192 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~al-l~pG 192 (419)
+++.+++++.+.+.... .+ |+.+ ....+++ +.+++++|.+. .|+++||++|+..++.++ ++||
T Consensus 15 ~~~~~~~a~~~~l~~~~-~~-----~~~~-~~~~~l~----~~la~~~~~~~-----~i~~~sGt~al~~~l~~l~~~~g 78 (388)
T 1b9h_A 15 YDDAERNGLVRALEQGQ-WW-----RMGG-DEVNSFE----REFAAHHGAAH-----ALAVTNGTHALELALQVMGVGPG 78 (388)
T ss_dssp CCHHHHHHHHHHHHTSC-CB-----TTTC-SHHHHHH----HHHHHHTTCSE-----EEEESCHHHHHHHHHHHTTCCTT
T ss_pred CCHHHHHHHHHHHHcCC-ee-----ecCC-HHHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHHHcCCCCc
Confidence 34899999988876421 11 1222 2234444 67888999863 478899999999999999 8999
Q ss_pred CEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCCcCChHHHH
Q 014724 193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMR 272 (419)
Q Consensus 193 D~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~~~dl~~I~ 272 (419)
|+|++++++|.++.. .+...|. +++.++++++++.+|+++|++.+++ ++++|+.+++ ++...|+++|.
T Consensus 79 d~Vi~~~~~~~~~~~--------~~~~~g~--~~~~v~~~~~~~~~d~~~l~~~i~~-~~~~v~~~n~-tG~~~~l~~i~ 146 (388)
T 1b9h_A 79 TEVIVPAFTFISSSQ--------AAQRLGA--VTVPVDVDAATYNLDPEAVAAAVTP-RTKVIMPVHM-AGLMADMDALA 146 (388)
T ss_dssp CEEEEESSSCTHHHH--------HHHHTTC--EEEEECBCTTTCCBCHHHHHHHCCT-TEEEECCBCG-GGCCCCHHHHH
T ss_pred CEEEECCCccHHHHH--------HHHHcCC--EEEEEecCCCcCCCCHHHHHHhcCc-CceEEEEeCC-ccCcCCHHHHH
Confidence 999999998877642 2334454 5566666655688999999999864 7888873322 34568999999
Q ss_pred HHHHHhCCEEEEeccccccccccCCcCCCCCCCcEEEeCCCCcCCCCCeeEEEEeCCCcchhhH--HHHhhhcccC----
Q 014724 273 QIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVEL--ESAINNAVFP---- 346 (419)
Q Consensus 273 ~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~~~Div~~S~hK~l~GprgG~i~~~~~~~~~~~l--~~~i~~~~~~---- 346 (419)
++|++||++||+|++|..|....+.....+..+++.++|.||+++|++||+++++++ .+ .+.+......
T Consensus 147 ~la~~~~~~li~D~a~~~g~~~~~~~~~~~~~i~~~S~s~~K~l~g~~~G~~~~~~~-----~~~~~~~~~~~~~~~~~~ 221 (388)
T 1b9h_A 147 KISADTGVPLLQDAAHAHGARWQGKRVGELDSIATFSFQNGKLMTAGEGGAVVFPDG-----ETEKYETAFLRHSCGRPR 221 (388)
T ss_dssp HHHHHHTCCBCEECTTCTTCEETTEEGGGSSSCEEEECCTTSSSCSSSCEEEEECTT-----CHHHHHHHHHHTBTTCCT
T ss_pred HHHHHcCCEEEEecchhcCCccCCeecccccceEEEEccCCCcccCCCeEEEEECCH-----HHHHHHHHHHHHhCCCCc
Confidence 999999999999999987765433211111123444555668898899999999874 34 3443221110
Q ss_pred -------CCCCCC-hHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEEecC-----CCcceeEEEEeC
Q 014724 347 -------GLQGGP-HNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSG-----GSDNHLVLVDLR 412 (419)
Q Consensus 347 -------~~~g~p-~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~~~-----~t~~hlv~vd~~ 412 (419)
...|.+ ..+.+.+ +..+... +.+++..+++.++++++.+.|++. |+++... ....+++|+++.
T Consensus 222 ~~~~~~~~~~g~~~~~~~~~~-a~~~~~~--~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (388)
T 1b9h_A 222 DDRRYFHKIAGSNMRLNEFSA-SVLRAQL--ARLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIP 298 (388)
T ss_dssp TCSSCCCCSCCCBCBCBHHHH-HHHHHHH--TTHHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECT
T ss_pred cCccceeecccccCCcCHHHH-HHHHHHH--HHHHHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCccceEEEEEEeC
Confidence 001111 0111211 1112222 235667788888999999999987 8887642 123578999886
Q ss_pred C
Q 014724 413 P 413 (419)
Q Consensus 413 ~ 413 (419)
.
T Consensus 299 ~ 299 (388)
T 1b9h_A 299 G 299 (388)
T ss_dssp T
T ss_pred C
Confidence 4
No 78
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.89 E-value=3.2e-21 Score=192.22 Aligned_cols=279 Identities=15% Similarity=0.142 Sum_probs=185.6
Q ss_pred hcccccccCC-C-ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHH-HHHHHHHHHHHHcC--CCCCCCceeEecCC-
Q 014724 103 KSLELIASEN-F-TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDE-LETLCQKRALAAFN--LDENKWGVNVQPLS- 176 (419)
Q Consensus 103 ~~i~L~~sen-~-~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~-lE~~~~~~la~~~g--~~~~~~~v~V~~~s- 176 (419)
+.|+|..+++ + .++.|++++.+.+... ..+|+.. ..+ +++.+.+++.+.+| ++++ +|++++
T Consensus 29 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~--------~~~~lr~~la~~l~~~~g~~~~~~----~v~~t~g 95 (390)
T 1d2f_A 29 DLLPFTISDMDFATAPCIIEALNQRLMHG-VFGYSRW--------KNDEFLAAIAHWFSTQHYTAIDSQ----TVVYGPS 95 (390)
T ss_dssp -CEECCSSSCSSCCCHHHHHHHHHHHTTC-CCCCCCS--------CCHHHHHHHHHHHHHHSCCCCCGG----GEEEESC
T ss_pred CeeEeeecCCCCCCCHHHHHHHHHHHhCC-CCCCCCC--------ChHHHHHHHHHHHHHhcCCCCCHH----HEEEcCC
Confidence 4577776664 2 5799999998887532 2234321 125 77677778877788 4443 244554
Q ss_pred hHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCC--CCCCCHHHHHHHhhhcCCeE
Q 014724 177 GSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES--TGLVDYDMLEKTAILFRPKL 254 (419)
Q Consensus 177 Gt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~--~~~iD~d~Le~~l~~~~pkl 254 (419)
|++|+.+++.++++|||+|++..|.|.++.. .+...|. +++.++++++ ++.+|+++|++.+++.++++
T Consensus 96 ~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~ 165 (390)
T 1d2f_A 96 VIYMVSELIRQWSETGEGVVIHTPAYDAFYK--------AIEGNQR--TVMPVALEKQADGWFCDMGKLEAVLAKPECKI 165 (390)
T ss_dssp HHHHHHHHHHHSSCTTCEEEEEESCCHHHHH--------HHHHTTC--EEEEEECEECSSSEECCHHHHHHHHTSTTEEE
T ss_pred HHHHHHHHHHHhcCCCCEEEEcCCCcHHHHH--------HHHHCCC--EEEEeecccCCCccccCHHHHHHHhccCCCeE
Confidence 5789999999999999999999998876531 2234455 4444444422 24699999999997557899
Q ss_pred EEEcCCCCCC--cCC---hHHHHHHHHHhCCEEEEeccccccccccCCcCCC---CC-C-CcEEEeCCCCcC--CCCCee
Q 014724 255 IIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP---FK-Y-CDVVTTTTHKSL--RGPRGG 322 (419)
Q Consensus 255 Ii~~~s~~p~--~~d---l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~---~~-~-~Div~~S~hK~l--~GprgG 322 (419)
|++++|+||+ ..+ +++|+++|++||++||+|++|.. +...+....+ +. . .|. ++|+||+| +|.|.|
T Consensus 166 v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~-~~~~g~~~~~~~~~~~~~~d~-~~s~sK~~~~~G~r~G 243 (390)
T 1d2f_A 166 MLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMD-MVWGEQPHIPWSNVARGDWAL-LTSGSKSFNIPALTGA 243 (390)
T ss_dssp EEEESSCTTTCCCCCTTHHHHHHHHHHHTTCEEEEECTTTT-CBCSSSCCCCGGGTCCSSEEE-EECSHHHHTCGGGCCE
T ss_pred EEEeCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccc-cccCCCCCcCHHHcchhhHhh-ccCccHhhcccChhhe
Confidence 9888888874 333 89999999999999999999753 3333321111 21 2 277 99999987 677889
Q ss_pred EEEEeCCCcchhhHHHHhhhccc-CCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHh-C-CcEEec
Q 014724 323 MIFFKKDPVLGVELESAINNAVF-PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-L-GYKLVS 399 (419)
Q Consensus 323 ~i~~~~~~~~~~~l~~~i~~~~~-~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~-~-G~~v~~ 399 (419)
+++++++ ++.+.+..... ....++++....++...+++.. .+.+++..+++.++++++.+.|++ . |+++..
T Consensus 244 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 317 (390)
T 1d2f_A 244 YGIIENS-----SSRDAYLSALKGRDGLSSPSVLALTAHIAAYQQG-APWLDALRIYLKDNLTYIADKMNAAFPELNWQI 317 (390)
T ss_dssp EEEECSH-----HHHHHHHHHHHTTSCCCSCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCCC
T ss_pred EEEECCH-----HHHHHHHHHHhhhcccCCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHhhCCCCEEec
Confidence 9998643 56666554332 1112233444444444456542 234577788889999999999988 4 887654
Q ss_pred CCCcceeEEEEeCC
Q 014724 400 GGSDNHLVLVDLRP 413 (419)
Q Consensus 400 ~~t~~hlv~vd~~~ 413 (419)
+ ..+.++|+++..
T Consensus 318 ~-~~~~~~~~~~~~ 330 (390)
T 1d2f_A 318 P-QSTYLAWLDLRP 330 (390)
T ss_dssp C-SBCSEEEEECGG
T ss_pred C-CccEEEEEEccc
Confidence 2 345567888864
No 79
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.89 E-value=3e-22 Score=199.84 Aligned_cols=283 Identities=15% Similarity=0.151 Sum_probs=188.4
Q ss_pred hcccccccC-CCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHH
Q 014724 103 KSLELIASE-NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPAN 181 (419)
Q Consensus 103 ~~i~L~~se-n~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~ 181 (419)
..|-|..+. .++++.|++++.+.+.+.+ +++...+..+.. ..++.+.+++++++++|++++ ..+++++|++|+
T Consensus 20 ~~iyld~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~l~~~la~~~~~~~~---~v~~~~g~t~al 93 (400)
T 3vax_A 20 HMTYLDAAATTRVDQRVADIVLHWMTAEF--GNAGSRHEYGIR-AKRGVERAREYLASTVSAEPD---ELIFTSGATESN 93 (400)
T ss_dssp --CCCCCCCCSSSCHHHHHHHHHHHHHHH--SCSSCHHHHHHH-HHHHHHHHHHHHHHHTTCCGG---GEEEESCHHHHH
T ss_pred CcEEecCCCCCCCCHHHHHHHHHHHHhcc--CCCcccchhHHH-HHHHHHHHHHHHHHHcCCCCC---cEEEeCCHHHHH
Confidence 345454333 4689999999999886544 333332222221 233444567899999999864 124455567899
Q ss_pred HHHHHHcc----CCCC-EEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEE
Q 014724 182 FEVYTAIL----KPHD-RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLII 256 (419)
Q Consensus 182 ~~~~~all----~pGD-~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi 256 (419)
..++.+++ +||| +|++++++|.++.... ..+...|. +++.++++ +++.+|+++|++.+++ ++++|+
T Consensus 94 ~~~~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~-----~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~-~~~~v~ 164 (400)
T 3vax_A 94 NIALLGLAPYGERTGRRHIITSAIEHKAVLEPL-----EHLAGRGF--EVDFLTPG-PSGRISVEGVMERLRP-DTLLVS 164 (400)
T ss_dssp HHHHHTTHHHHHHHTCCEEEEETTSCHHHHHHH-----HHHHTTTC--EEEEECCC-TTCCCCHHHHHTTCCT-TEEEEE
T ss_pred HHHHHHHHHhhccCCCCEEEECccccHhHHHHH-----HHHHhcCC--eEEEEccC-CCCCcCHHHHHHhcCC-CceEEE
Confidence 99999998 8999 9999998887654211 11122354 55555555 3688999999999875 789999
Q ss_pred EcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCCC-CcEEEeCCCCcCCCCCe-eEEE-EeCCCc
Q 014724 257 AGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKY-CDVVTTTTHKSLRGPRG-GMIF-FKKDPV 331 (419)
Q Consensus 257 ~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~~-~Div~~S~hK~l~Gprg-G~i~-~~~~~~ 331 (419)
+++++||+ ..|+++|.++|++||++||+|++|..|.... .+.. +|++++|+|| +.||.| |+++ .+++
T Consensus 165 ~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~-----~~~~~~d~~~~s~~K-~~g~~g~g~~~~~~~~-- 236 (400)
T 3vax_A 165 LMHVNNETGVIQPVAELAQQLRATPTYLHVDAAQGYGKVPG-----DLTTPIDMISISGHK-IGAPKGVGALVTRRRE-- 236 (400)
T ss_dssp CCSBCTTTCBBCCHHHHHHHHTTSSCEEEEECTTTTTTSGG-----GGGSCCSEEEEETGG-GTSCSSCEEEEECBCS--
T ss_pred EECCCCCceeeCcHHHHHHHHHhcCCEEEEEhhhhcCCCCc-----ChhhcCcEEEEeHHH-hCCCCceEEEEEecch--
Confidence 99988874 6789999999999999999999987654311 1111 7999999999 456664 8888 7762
Q ss_pred chhhHH---HHhhhccc------CCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCC
Q 014724 332 LGVELE---SAINNAVF------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGS 402 (419)
Q Consensus 332 ~~~~l~---~~i~~~~~------~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t 402 (419)
++. ..+..... ....++++...++++..+++... .+++++.+++.++++++.+.|+..|+++.....
T Consensus 237 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 312 (400)
T 3vax_A 237 ---EMDDERVPLEPIMFGGGQERKLRPGTLPVPLIMGLAEAAKIFE-AEHAQWQVAAQDLRSRLLAGLASTSFQVNGDQD 312 (400)
T ss_dssp ---SSTTCBCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHH-HSHHHHHHHHHHHHHHHHHHHTTTTCEECSCTT
T ss_pred ---hccccccccCceecCCCceeeeecCCCCHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHhhCCCCEEEeCCcc
Confidence 111 11111111 01123455556666666666554 356788899999999999999955888875321
Q ss_pred --cceeEEEEeC
Q 014724 403 --DNHLVLVDLR 412 (419)
Q Consensus 403 --~~hlv~vd~~ 412 (419)
..+++++.+.
T Consensus 313 ~~~~~~~~~~~~ 324 (400)
T 3vax_A 313 HVVPHILNLSFE 324 (400)
T ss_dssp SBCTTEEEEECT
T ss_pred cCCCCEEEEEeC
Confidence 2356776654
No 80
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.89 E-value=1.9e-21 Score=192.53 Aligned_cols=280 Identities=13% Similarity=0.072 Sum_probs=188.7
Q ss_pred hhcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHH
Q 014724 102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP 179 (419)
Q Consensus 102 ~~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~ 179 (419)
++.|+|..+++. +++.|++++.+.+.+. ..+|+. . |. ++++.+.+++.+.+|.+.+ ....+++++|++
T Consensus 23 ~~~idl~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~-~---~~----~lr~~la~~~~~~~~~~~~-~~~i~~t~g~~~ 92 (377)
T 3fdb_A 23 QGVLPLWVAESDFSTCPAVLQAITDAVQRE-AFGYQP-D---GS----LLSQATAEFYADRYGYQAR-PEWIFPIPDVVR 92 (377)
T ss_dssp TTSEECCSSCCCSCCCHHHHHHHHHHHHTT-CCSSCC-S---SC----CHHHHHHHHHHHHHCCCCC-GGGEEEESCHHH
T ss_pred CCeeeecccCCCCCCCHHHHHHHHHHHHcC-CCCCCC-C---CH----HHHHHHHHHHHHHhCCCCC-HHHEEEeCChHH
Confidence 456888877754 5899999999887642 224443 1 22 4555666777777775432 112244455678
Q ss_pred HHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcC
Q 014724 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 259 (419)
Q Consensus 180 A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~ 259 (419)
|+..++.++++|||+|++..|.|.++.. .+...|. +++.+++++ + +|+++|++.+++ ++++|++++
T Consensus 93 a~~~~~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~--~~~~~~~~~-~--~d~~~l~~~l~~-~~~~v~i~~ 158 (377)
T 3fdb_A 93 GLYIAIDHFTPAQSKVIVPTPAYPPFFH--------LLSATQR--EGIFIDATG-G--INLHDVEKGFQA-GARSILLCN 158 (377)
T ss_dssp HHHHHHHHHSCTTCCEEEEESCCTHHHH--------HHHHHTC--CEEEEECTT-S--CCHHHHHHHHHT-TCCEEEEES
T ss_pred HHHHHHHHhcCCCCEEEEcCCCcHhHHH--------HHHHcCC--EEEEccCCC-C--CCHHHHHHHhcc-CCCEEEEeC
Confidence 9999999999999999999998877542 2234455 444444543 2 999999999975 689999999
Q ss_pred CCCCC--cC---ChHHHHHHHHHhCCEEEEeccccccccccC-CcCCCCC-----CCcEEEeCCCCcC--CCCCeeEEEE
Q 014724 260 SAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAAS-VVADPFK-----YCDVVTTTTHKSL--RGPRGGMIFF 326 (419)
Q Consensus 260 s~~p~--~~---dl~~I~~ia~~~ga~livD~ah~~Gl~~~g-~~~~~~~-----~~Div~~S~hK~l--~GprgG~i~~ 326 (419)
|+||+ .. ++++|+++|++||+++|+|++|. ++...+ ....++. ..+++++|+||++ +|.|.|+++.
T Consensus 159 p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~ 237 (377)
T 3fdb_A 159 PYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHA-PLVFDGQHTVAAGVSDTAASVCITITAPSKAWNIAGLKCAQIIF 237 (377)
T ss_dssp SBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTG-GGBSSSCCCCGGGSCHHHHHHEEEEECSTTTTTCGGGCCEEEEC
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccc-hhhcCCCCCcccHHHccCCCcEEEEEeChHhccCcchhheEEEe
Confidence 99885 33 47788888999999999999975 444433 1111221 2348899999998 6778898877
Q ss_pred eCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC--CcEEecCCCcc
Q 014724 327 KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLVSGGSDN 404 (419)
Q Consensus 327 ~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~--G~~v~~~~t~~ 404 (419)
.++ ++.+.+....... ..+++....++...++... .+.+++..+++.++++++.+.|++. |+++..+ ..+
T Consensus 238 ~~~-----~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~ 309 (377)
T 3fdb_A 238 SNP-----SDAEHWQQLSPVI-KDGASTLGLIAAEAAYRYG-TDFLNQEVAYLKNNHDFLLHEIPKRIPGAKITPM-QAT 309 (377)
T ss_dssp CSH-----HHHHHHHHSCHHH-HCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHSTTCEECCC-SBC
T ss_pred CCH-----HHHHHHHHHHHhh-cCCCCHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecC-Cee
Confidence 543 6666665432111 1233344444444456543 2345778889999999999999985 8988753 345
Q ss_pred eeEEEEeCCc
Q 014724 405 HLVLVDLRPM 414 (419)
Q Consensus 405 hlv~vd~~~~ 414 (419)
.++|+++...
T Consensus 310 ~~~~~~~~~~ 319 (377)
T 3fdb_A 310 YLMWIDFRDT 319 (377)
T ss_dssp SEEEEECTTS
T ss_pred EEEEEECccc
Confidence 5678888753
No 81
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.88 E-value=5.2e-21 Score=198.72 Aligned_cols=254 Identities=15% Similarity=0.093 Sum_probs=175.4
Q ss_pred hHHHHHHHHHHHHHHHHcCCCCC-CCceeEecCChHHHHHHHHHHccC--------------CCCEEEEeCCCCCccccC
Q 014724 144 EYIDELETLCQKRALAAFNLDEN-KWGVNVQPLSGSPANFEVYTAILK--------------PHDRIMGLDLPHGGHLSH 208 (419)
Q Consensus 144 ~~~~~lE~~~~~~la~~~g~~~~-~~~v~V~~~sGt~A~~~~~~all~--------------pGD~Vl~~~~~~~g~~s~ 208 (419)
+...++|+.+.+|+++++|++.+ ++ .+++++||+||..++.++.+ |++.|+++++.|.++.
T Consensus 131 p~~~~le~~~~~~l~~~~g~~~~~~~--~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s~~~H~s~~-- 206 (511)
T 3vp6_A 131 PVFVLMEQITLKKMREIVGWSSKDGD--GIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIK-- 206 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCSSSCE--EEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCCEEEEEETTSCTHHH--
T ss_pred chHHHHHHHHHHHHHHHhCCCCCCCc--eEECCchHHHHHHHHHHHHHHhhhhhhhcCcccCCCeEEEECCCchHHHH--
Confidence 55678999999999999999852 22 36677889999988877754 5788999988776643
Q ss_pred cccccccccccccccc-EEEecccCCCCCCCCHHHHHHHhhhcC-----CeEEEEcCCCCC--CcCChHHHHHHHHHhCC
Q 014724 209 GFMTPKRRVSGTSIYF-ESMPYRLDESTGLVDYDMLEKTAILFR-----PKLIIAGASAYP--RDFDYPRMRQIADAVGA 280 (419)
Q Consensus 209 ~~~~~~~~i~~~g~~~-~~v~~~~~~~~~~iD~d~Le~~l~~~~-----pklIi~~~s~~p--~~~dl~~I~~ia~~~ga 280 (419)
+.+...|.+. +++.++++ +++.+|+++|++++++.+ |++|+++.++|+ ...|+++|+++|++||+
T Consensus 207 ------~~~~~~g~g~~~~~~v~~d-~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~l~~I~~ia~~~~~ 279 (511)
T 3vp6_A 207 ------KAGAALGFGTDNVILIKCN-ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNL 279 (511)
T ss_dssp ------HHHHHTTSCGGGEEEECBC-TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCCHHHHHHHHHHHTC
T ss_pred ------HHHHHcCCCCCcEEEeecC-CCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCcccccHHHHHHHHHHcCC
Confidence 2344556522 34444455 468999999999997532 788888776655 56799999999999999
Q ss_pred EEEEeccccccccccCCcCCCC---CCCcEEEeCCCCcCCCCCe-eEEEEeCCCcchhhHHHHhhhcccC----------
Q 014724 281 LLMMDMAHISGLVAASVVADPF---KYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAVFP---------- 346 (419)
Q Consensus 281 ~livD~ah~~Gl~~~g~~~~~~---~~~Div~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~~~~~~---------- 346 (419)
++++|++|..|......+...+ .++|++++++||+|.+|.+ |+++.+++ ++.........+
T Consensus 280 ~lhvD~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p~g~g~l~~~~~-----~~~~~~~~~~~~yl~~~~~~~~ 354 (511)
T 3vp6_A 280 WLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEK-----GILQGCNQMHASYLFQQDKHYD 354 (511)
T ss_dssp EEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESST-----THHHHHHCCCCTTTCCSSCSSC
T ss_pred EEEEEccchhhHhhChhhhhhccCCccCCEEEECcccccCCCcCeEEEEEeCH-----HHHHHHhccCCccccCcccccc
Confidence 9999999877765332222112 2679999999999988865 88888775 443332111000
Q ss_pred --------CCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEEecC-CCcceeEEEEeCCc
Q 014724 347 --------GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSG-GSDNHLVLVDLRPM 414 (419)
Q Consensus 347 --------~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~~~-~t~~hlv~vd~~~~ 414 (419)
.++++.... ..++..+++....++++++.++..++++++++.|++. ||+++.+ .....++.+.+.|.
T Consensus 355 ~~~~~~~~~~~~~r~~~-al~~~~al~~~g~~gl~~~~~~~~~~a~~l~~~L~~~pg~~l~~~~~p~~~~v~f~~~p~ 431 (511)
T 3vp6_A 355 VSYDTGDKAIQCGRHVD-IFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFWYIPQ 431 (511)
T ss_dssp GGGCCGGGSSCSSCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTEEESSSSCCSSSCEEEEECCG
T ss_pred cccCccCCCCCCCCchH-HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEEEEeCc
Confidence 111121111 2334445555554567889999999999999999986 9998762 23455566666544
No 82
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.88 E-value=2.5e-21 Score=193.00 Aligned_cols=300 Identities=12% Similarity=0.068 Sum_probs=197.4
Q ss_pred ccccccChhHHHHHHHHHHHh-----hhcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHH
Q 014724 81 YSLGEADPEVCEIITKEKERQ-----FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLC 153 (419)
Q Consensus 81 ~~l~~~~~~~~~~~~~e~~r~-----~~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~ 153 (419)
.++..+.+..+..+.....+. ++.|+|..+++. +++.|++++.+.+... .+|+.. .|. .++++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~--~~y~~~---~g~---~~lr~~l 75 (396)
T 3jtx_A 4 TLLKQLKPYPFARLHEAMQGISAPEGMEAVPLHIGEPKHPTPKVITDALTASLHEL--EKYPLT---AGL---PELRQAC 75 (396)
T ss_dssp HHHHHCCSCHHHHHHHHTTTCCCCTTCCCEECSCCSCCSCCCHHHHHHHHHTGGGG--GSCCCT---TCC---HHHHHHH
T ss_pred hhhccCCCChHHHHHHHHHhhhhccCCCeEEeCCcCCCCCCCHHHHHHHHHHhhhc--cCCCCC---CCc---HHHHHHH
Confidence 345566666655554432221 356888887753 5799999998877422 244431 122 3666677
Q ss_pred HHHHHHHcCCC---CCCCceeEecCChHHHHHHHHHHccCCC-----CEEEEeCCCCCccccCccccccccccccccccE
Q 014724 154 QKRALAAFNLD---ENKWGVNVQPLSGSPANFEVYTAILKPH-----DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFE 225 (419)
Q Consensus 154 ~~~la~~~g~~---~~~~~v~V~~~sGt~A~~~~~~all~pG-----D~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~ 225 (419)
.+++.+.+|.+ +++. + +++++|++|+..++.++++|| |+|++..|.|.++.. .+...|. +
T Consensus 76 a~~l~~~~g~~~~~~~~~-i-~~t~g~~~al~~~~~~~~~~g~~~~~d~vl~~~p~~~~~~~--------~~~~~g~--~ 143 (396)
T 3jtx_A 76 ANWLKRRYDGLTVDADNE-I-LPVLGSREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEG--------ATLLGGG--E 143 (396)
T ss_dssp HHHHHHHTTTCCCCTTTS-E-EEESSHHHHHHHHHHHHCCC---CCCCEEEEEESCCHHHHH--------HHHHTTC--E
T ss_pred HHHHHHhcCCCCCCCCCe-E-EEcCCcHHHHHHHHHHHhCCCCccCCCEEEEcCCCcHhHHH--------HHHHcCC--E
Confidence 78888888864 4211 2 444455789999999999997 799999998766531 2234555 4
Q ss_pred EEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCC---hHHHHHHHHHhCCEEEEeccccccccccCCcCC
Q 014724 226 SMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVAD 300 (419)
Q Consensus 226 ~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~d---l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~ 300 (419)
++.++++++++.+|+++|++.+.+ ++++|++++|+||+ ..+ +++|+++|++||++||+|++|. ++...+..+.
T Consensus 144 ~~~v~~~~~g~~~d~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~-~~~~~~~~~~ 221 (396)
T 3jtx_A 144 IHFANCPAPSFNPDWRSISEEVWK-RTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYS-EIYFDGNKPL 221 (396)
T ss_dssp EEEEECCTTTCCCCGGGSCHHHHH-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTT-TCCSTTCCCC
T ss_pred EEEeecCCCCCccCHHHHHHhhcc-CcEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEcccc-ccccCCCCCc
Confidence 445555544567999999999875 89999998899885 334 5669999999999999999974 4444331111
Q ss_pred C-C---------CCCcEEEeCCCCcC--CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhc
Q 014724 301 P-F---------KYCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ 368 (419)
Q Consensus 301 ~-~---------~~~Div~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~ 368 (419)
. + .+.++++.|+||++ +|.|.|+++.++ ++.+.+........ .+++....+++..++..
T Consensus 222 ~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~------~~~~~~~~~~~~~~-~~~~~~~~~a~~~~l~~-- 292 (396)
T 3jtx_A 222 GCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAGDA------ELLKNFLLYRTYHG-SAMSIPVQRASIAAWDD-- 292 (396)
T ss_dssp CHHHHHHHTTCCCTTEEEEEESTTTSSCGGGCCEEEEECH------HHHHHHHHHHHHHT-CCCCHHHHHHHHHHHHC--
T ss_pred hHHhhhhhcccccCcEEEEeccccccCCcccceEEEEeCH------HHHHHHHHHHhhcc-cCCCHHHHHHHHHHhCC--
Confidence 1 0 14568999999975 678889998877 56666554322111 12333334444445543
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeEEEEeCC
Q 014724 369 SPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 369 ~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~vd~~~ 413 (419)
...+++..+++.++++++.+.|++. +.+.. ....+++|+++..
T Consensus 293 ~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~-~~~~~~~~~~~~~ 335 (396)
T 3jtx_A 293 EQHVIDNRRLYQEKFERVIPILQQV-FDVKL-PDASFYIWLKVPD 335 (396)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTT-SCCCC-CSSSSEEEEECTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc-CCccC-CCeeEEEEEECCC
Confidence 3456788888999999999999876 44433 2346778998864
No 83
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.88 E-value=2.9e-21 Score=192.88 Aligned_cols=283 Identities=14% Similarity=0.107 Sum_probs=181.7
Q ss_pred hhcccccccCC--CChHHHHHHHhhhhhccC---CCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecC-
Q 014724 102 FKSLELIASEN--FTSRAVMEAVGSCLTNKY---SEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPL- 175 (419)
Q Consensus 102 ~~~i~L~~sen--~~~~~V~eal~~~l~~~y---~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~- 175 (419)
.+.|+|..+.. .+++.|++++.+.+.... ..+|+. ..|. .++++.+.+++.+.+|.+.+ . .+|+++
T Consensus 35 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~y~~---~~g~---~~lr~~la~~l~~~~g~~~~-~-~~i~~~~ 106 (398)
T 3ele_A 35 ENVYDFSIGNPSIPAPQIVNDTIKELVTDYDSVALHGYTS---AQGD---VETRAAIAEFLNNTHGTHFN-A-DNLYMTM 106 (398)
T ss_dssp GGCEECCSCCCCSCCCHHHHHHHHHHHHHSCHHHHHSCCC---TTCC---HHHHHHHHHHHHHHHCCCCC-G-GGEEEES
T ss_pred CCeEEeecCCCCCCCCHHHHHHHHHHHhcCCccccCCcCC---CCCc---HHHHHHHHHHHHHHhCCCCC-h-HHEEEcc
Confidence 35688887653 257999999988875421 123432 1122 36666777888888885432 1 124444
Q ss_pred ChHHHHHHHHHHccCCC-CEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeE
Q 014724 176 SGSPANFEVYTAILKPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKL 254 (419)
Q Consensus 176 sGt~A~~~~~~all~pG-D~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pkl 254 (419)
+|++|+..++.++++|| |+|++.+|.|.++.. .+...|. +++.++++++++.+|+|+|++.+++ ++++
T Consensus 107 g~~~al~~~~~~l~~~g~d~vl~~~p~~~~~~~--------~~~~~g~--~~~~v~~~~~~~~~d~~~l~~~l~~-~~~~ 175 (398)
T 3ele_A 107 GAAASLSICFRALTSDAYDEFITIAPYFPEYKV--------FVNAAGA--RLVEVPADTEHFQIDFDALEERINA-HTRG 175 (398)
T ss_dssp SHHHHHHHHHHHHCCSTTCEEEEESSCCTHHHH--------HHHHTTC--EEEEECCCTTTSSCCHHHHHHTCCT-TEEE
T ss_pred CHHHHHHHHHHHHcCCCCCEEEEeCCCchhhHH--------HHHHcCC--EEEEEecCCcCCcCCHHHHHHHhCc-CCCE
Confidence 55789999999999999 999999998876532 2234555 5555556555678999999999875 7899
Q ss_pred EEEcCCCCCC--cCC---hHHHHHHHHH------hCCEEEEeccccccccccCC-cCCCCC--CCcEEEeCCCCcC--CC
Q 014724 255 IIAGASAYPR--DFD---YPRMRQIADA------VGALLMMDMAHISGLVAASV-VADPFK--YCDVVTTTTHKSL--RG 318 (419)
Q Consensus 255 Ii~~~s~~p~--~~d---l~~I~~ia~~------~ga~livD~ah~~Gl~~~g~-~~~~~~--~~Div~~S~hK~l--~G 318 (419)
|++++|+||+ ..+ +++|+++|++ ||++||+|++|. ++.+.+. .+...+ ..+++++|+||+| +|
T Consensus 176 v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 254 (398)
T 3ele_A 176 VIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYR-EIVYDGIKVPFVTKYYDNTLVCYSYSKSLSLPG 254 (398)
T ss_dssp EEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTT-TCBCTTCCCCCGGGTCSSEEEEEESTTTSSCTT
T ss_pred EEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEecccc-ccccCCCCcCChHhhcCCeEEEEehhhcCCCcc
Confidence 9999999985 344 6778899999 999999999974 4443331 222112 4568999999997 67
Q ss_pred CCeeEEEEeCCCcchhhHHHHhhhcc-cCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEE
Q 014724 319 PRGGMIFFKKDPVLGVELESAINNAV-FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKL 397 (419)
Q Consensus 319 prgG~i~~~~~~~~~~~l~~~i~~~~-~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v 397 (419)
+|.|+++++++.....++.+.+.... ..+.. +++.....++..++. .. ...+++.++++++.+.|++.|+++
T Consensus 255 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~a~~~~l~---~~---~~~~~~~~~~~~l~~~L~~~g~~~ 327 (398)
T 3ele_A 255 ERIGYVLVPDEVYDKAELYAAVCGAGRALGYV-CAPSLFQKMIVKCQG---AT---GDINAYKENRDLLYEGLTRIGYHC 327 (398)
T ss_dssp TCCEEEECCTTSTTHHHHHHHHHHHHHHTTCC-CSCHHHHHHHTTCTT---CC---CCHHHHHHHHHHHHHHHHHHTCCE
T ss_pred ceeEEEEEcchhhhHHHHHHHHHHHhhhcccc-CCCHHHHHHHHHHhc---CH---HHHHHHHHHHHHHHHHHHHcCCee
Confidence 88999999875321001222222111 11111 222222222221221 11 135667788899999999889887
Q ss_pred ecCCCcceeEEEEeC
Q 014724 398 VSGGSDNHLVLVDLR 412 (419)
Q Consensus 398 ~~~~t~~hlv~vd~~ 412 (419)
..+ ..+.++|+++.
T Consensus 328 ~~~-~~~~~~~~~~~ 341 (398)
T 3ele_A 328 FKP-DGAFYMFVKAL 341 (398)
T ss_dssp ECC-SBSSEEEEECS
T ss_pred cCC-CeeEEEEEEcC
Confidence 753 34555888875
No 84
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.88 E-value=4.9e-22 Score=199.49 Aligned_cols=285 Identities=17% Similarity=0.114 Sum_probs=185.1
Q ss_pred hhcccccccCC-----CChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCC
Q 014724 102 FKSLELIASEN-----FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLS 176 (419)
Q Consensus 102 ~~~i~L~~sen-----~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~s 176 (419)
++.|+|..+++ ..++.+++++.+.+.+.. .+|+.. .| ..++++.+.+++.+.+|++.+ . .+|++++
T Consensus 38 ~~~i~l~~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~~~---~g---~~~l~~~la~~l~~~~g~~~~-~-~~v~~t~ 108 (406)
T 1xi9_A 38 IKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEGH-NYYGDS---EG---LPELRKAIVEREKRKNGVDIT-P-DDVRVTA 108 (406)
T ss_dssp CCCEECCCCCGGGTTCCCCHHHHHHHHHHHHTTC-CSCCCT---TC---CHHHHHHHHHHHHHHHCCCCC-G-GGEEEES
T ss_pred CCEEEecCCCCCcCCCCCCHHHHHHHHHHHhcCC-CCCCCC---CC---cHHHHHHHHHHHHHhcCCCCC-H-HHEEEcC
Confidence 45678877665 357899999988875432 234321 12 236776777777777765432 1 1344554
Q ss_pred -hHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCC-CCCCCCHHHHHHHhhhcCCeE
Q 014724 177 -GSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKL 254 (419)
Q Consensus 177 -Gt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~-~~~~iD~d~Le~~l~~~~pkl 254 (419)
|++|+..++.++++|||+|++.+|.|.++.. .+...|. +++.++.++ +++.+|+++|++.+++ ++++
T Consensus 109 g~~~al~~~~~~l~~~gd~Vl~~~~~~~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~ 177 (406)
T 1xi9_A 109 AVTEALQLIFGALLDPGDEILVPGPSYPPYTG--------LVKFYGG--KPVEYRTIEEEDWQPDIDDIRKKITD-RTKA 177 (406)
T ss_dssp HHHHHHHHHHHHHCCTTCEEEEEESCCHHHHH--------HHHHTTC--EEEEEEEEGGGTSEECHHHHHHHCCT-TEEE
T ss_pred ChHHHHHHHHHHhCCCCCEEEEcCCCCccHHH--------HHHHcCC--EEEEeecCCCcCCcCCHHHHHHhhCc-CceE
Confidence 5789999999999999999999998866431 2234555 444444543 3467899999999975 7899
Q ss_pred EEEcCCCCCC--cC---ChHHHHHHHHHhCCEEEEeccccccccccCCcCCC--C-CCC-cEEEeCCCCcC--CCCCeeE
Q 014724 255 IIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADP--F-KYC-DVVTTTTHKSL--RGPRGGM 323 (419)
Q Consensus 255 Ii~~~s~~p~--~~---dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~--~-~~~-Div~~S~hK~l--~GprgG~ 323 (419)
|++++++||+ .. ++++|+++|++||++||+|++|..+ .+.+...+. + .+. |++++|+||++ +|+|.|+
T Consensus 178 v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~ 256 (406)
T 1xi9_A 178 IAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLM-TYEGEHISPGSLTKDVPVIVMNGLSKVYFATGWRLGY 256 (406)
T ss_dssp EEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTC-BSSSCCCCHHHHCSSSCEEEEEESTTTTCCGGGCCEE
T ss_pred EEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCcccc-ccCCCCCCHHHcCCCceEEEEeccccccCCCccEEEE
Confidence 9888888874 33 4899999999999999999997543 332211110 1 245 78999999998 4778899
Q ss_pred EE--EeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEEecC
Q 014724 324 IF--FKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSG 400 (419)
Q Consensus 324 i~--~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~~~ 400 (419)
++ .+++.. .++.+.+....... . +++....+++..+++.. .+.+++..+++.++++++.+.|++. |+++..+
T Consensus 257 ~~~~~~~~~~--~~l~~~l~~~~~~~-~-~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 331 (406)
T 1xi9_A 257 MYFVDPENKL--SEVREAIDRLARIR-L-CPNTPAQFAAIAGLTGP-MDYLKEYMKKLKERRDYIYKRLNEIPGISTTKP 331 (406)
T ss_dssp EEEECTTCTT--HHHHHHHHHHHHHT-C-CSCSHHHHHHHHHHHSC-CHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCC
T ss_pred EEEecCchhH--HHHHHHHHHHHHhh-c-CCCHHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHHHHhCCCCeeecC
Confidence 88 655100 02444443321111 1 22223344444455432 3346777888999999999999987 8877642
Q ss_pred CCcceeEEEEeCC
Q 014724 401 GSDNHLVLVDLRP 413 (419)
Q Consensus 401 ~t~~hlv~vd~~~ 413 (419)
..+.++|+++..
T Consensus 332 -~~~~~~~~~~~~ 343 (406)
T 1xi9_A 332 -QGAFYIFPKIEV 343 (406)
T ss_dssp -CBSSEECCEECS
T ss_pred -CeeEEEEEecCc
Confidence 335567777753
No 85
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.88 E-value=3.8e-21 Score=196.33 Aligned_cols=278 Identities=10% Similarity=0.019 Sum_probs=185.9
Q ss_pred CCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCC--CceeEecCChHHHHHHHHHHcc
Q 014724 112 NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENK--WGVNVQPLSGSPANFEVYTAIL 189 (419)
Q Consensus 112 n~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~--~~v~V~~~sGt~A~~~~~~all 189 (419)
.+.++.+.+++.+.+..... .+ ...+...++|+.+++++++++|++.++ +...+++++||+|++.++.++.
T Consensus 52 ~~~~~~v~e~~~~a~~~~~~-~~------~~~~~~~~l~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~ 124 (452)
T 2dgk_A 52 TWDDENVHKLMDLSINKNWI-DK------EEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMK 124 (452)
T ss_dssp CCCCHHHHHHHHHTTTCBTT-CT------TTCHHHHHHHHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHhccCCC-Ch------hhChhHHHHHHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHH
Confidence 35678899999877643211 11 111345688888999999999998743 1123566777899999988875
Q ss_pred C--------CC-----CEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEE
Q 014724 190 K--------PH-----DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLII 256 (419)
Q Consensus 190 ~--------pG-----D~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi 256 (419)
+ +| |+|++++ .|.++. +.+...|. +++.++++++++.+|+++|++.+++ +|++|+
T Consensus 125 ~~~~~~~~~~G~~~~~~~vi~~~-~h~~~~--------~~~~~~G~--~v~~v~~~~~~~~~d~~~l~~~i~~-~t~~v~ 192 (452)
T 2dgk_A 125 WRWRKRMEAAGKPTDKPNLVCGP-VQICWH--------KFARYWDV--ELREIPMRPGQLFMDPKRMIEACDE-NTIGVV 192 (452)
T ss_dssp HHHHHHHHHTTCCCSCCEEEESS-CCHHHH--------HHHHHTTC--EEEECCCBTTBCSCCHHHHHHHCCT-TEEEEE
T ss_pred HHHHHHHHhcCCCCCCcEEEECC-CcHHHH--------HHHHHcCc--eEEEEecCCCCCeECHHHHHHHHhh-CCEEEE
Confidence 4 55 5898887 654332 12345565 5555556544689999999999975 789999
Q ss_pred EcCCCCC--CcCChHHHHHHHHHh------CCEEEEecccccccc--ccCCcCCC--CCCCcEEEeCCCCcC-CCCCeeE
Q 014724 257 AGASAYP--RDFDYPRMRQIADAV------GALLMMDMAHISGLV--AASVVADP--FKYCDVVTTTTHKSL-RGPRGGM 323 (419)
Q Consensus 257 ~~~s~~p--~~~dl~~I~~ia~~~------ga~livD~ah~~Gl~--~~g~~~~~--~~~~Div~~S~hK~l-~GprgG~ 323 (419)
++.++|+ ...|+++|+++|+++ |+++++|++|..+.. ..+..+.. ++++|++++++||++ .+++.|+
T Consensus 193 ~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~hK~~~~~~~~G~ 272 (452)
T 2dgk_A 193 PTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGW 272 (452)
T ss_dssp CBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTCCCSSCEE
T ss_pred EEcCCcCCcccCCHHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccchhhcCCCCCcEEEECcccccCCCCCeEE
Confidence 8888776 467999999999996 999999999765432 12211122 237899999999987 4557799
Q ss_pred EEEeCCCcchhhHH-HHhhhc-ccC-------CCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-
Q 014724 324 IFFKKDPVLGVELE-SAINNA-VFP-------GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL- 393 (419)
Q Consensus 324 i~~~~~~~~~~~l~-~~i~~~-~~~-------~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~- 393 (419)
++++++ ++. +.+... .+. ..+++.......++..++..+..++++++.++..++++++.+.|++.
T Consensus 273 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~aal~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~ 347 (452)
T 2dgk_A 273 VIWRDE-----EALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLG 347 (452)
T ss_dssp EEESSG-----GGSCGGGCEEECCTTCCEEECCSCCSCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred EEEcCH-----HHHHHHhccCccccCCCCCCcccCCCChhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999764 221 222110 010 12233333233444445555444567888999999999999999997
Q ss_pred CcEEecCC---CcceeEEEEeCC
Q 014724 394 GYKLVSGG---SDNHLVLVDLRP 413 (419)
Q Consensus 394 G~~v~~~~---t~~hlv~vd~~~ 413 (419)
|++++..+ ...+++.+.+.+
T Consensus 348 ~~~~~~~~~~~~~~~~v~f~~~~ 370 (452)
T 2dgk_A 348 PYEFICTGRPDEGIPAVCFKLKD 370 (452)
T ss_dssp SEEEEEECCTTTBSSEEEEEECT
T ss_pred CeEEecCCCCCCCeEEEEEEecC
Confidence 58887532 356778777754
No 86
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.88 E-value=7.2e-21 Score=188.58 Aligned_cols=274 Identities=17% Similarity=0.163 Sum_probs=188.3
Q ss_pred ccccccCCC--ChHHHHHHHhhhhhccC--CCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCCh-HH
Q 014724 105 LELIASENF--TSRAVMEAVGSCLTNKY--SEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-SP 179 (419)
Q Consensus 105 i~L~~sen~--~~~~V~eal~~~l~~~y--~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sG-t~ 179 (419)
|+|..+++. .++.+++++.+.+.+.. ..+|+.. .+ .++++.+.+++.+.+|...+ . .+|++++| ++
T Consensus 33 idl~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~---~~----~~l~~~la~~l~~~~g~~~~-~-~~v~~~~G~~~ 103 (369)
T 3cq5_A 33 IRLNTNENPYPPSEALVADLVATVDKIATELNRYPER---DA----VELRDELAAYITKQTGVAVT-R-DNLWAANGSNE 103 (369)
T ss_dssp EECSSCCCCSCCCHHHHHHHHHHHHHHGGGTTSCCCT---TC----HHHHHHHHHHHHHHHCCCCC-G-GGEEEESHHHH
T ss_pred eeccCCCCCCCCCHHHHHHHHHHHHhcccccccCCCc---cH----HHHHHHHHHhhhhcccCCCC-h-HhEEECCChHH
Confidence 778777763 57999999988775421 1233321 11 36776666777776665421 1 13566666 57
Q ss_pred HHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcC
Q 014724 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 259 (419)
Q Consensus 180 A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~ 259 (419)
|+..++.++++|||+|++.+|.|.++.. .+...|. +++.++.+ +++.+|++++++.+++.++++|++++
T Consensus 104 al~~~~~~l~~~gd~Vl~~~~~y~~~~~--------~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~v~~~~ 172 (369)
T 3cq5_A 104 ILQQLLQAFGGPGRTALGFQPSYSMHPI--------LAKGTHT--EFIAVSRG-ADFRIDMDVALEEIRAKQPDIVFVTT 172 (369)
T ss_dssp HHHHHHHHHCSTTCEEEEEESSCTHHHH--------HHHHTTC--EEEEEECC-TTSSCCHHHHHHHHHHHCCSEEEEES
T ss_pred HHHHHHHHhcCCCCEEEEcCCChHHHHH--------HHHHcCC--EEEEecCC-cCCCCCHHHHHHHhhccCCCEEEEeC
Confidence 8999999999999999999998876532 2234455 44445444 35689999999998755789999988
Q ss_pred CCCC--CcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--C-CcEEEeCCCCcC--CCCCeeEEEEeCCCcc
Q 014724 260 SAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--Y-CDVVTTTTHKSL--RGPRGGMIFFKKDPVL 332 (419)
Q Consensus 260 s~~p--~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~-~Div~~S~hK~l--~GprgG~i~~~~~~~~ 332 (419)
++|| ...|.+++.++|+.++++||+|++|..+. ........++ + .+++++|+||+| +|+|.|++++++
T Consensus 173 ~~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~---- 247 (369)
T 3cq5_A 173 PNNPTGDVTSLDDVERIINVAPGIVIVDEAYAEFS-PSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANP---- 247 (369)
T ss_dssp SCTTTCCCCCHHHHHHHHHHCSSEEEEECTTGGGC-CSCCGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEECT----
T ss_pred CCCCCCCCCCHHHHHHHHHhCCCEEEEECCchhhc-CCcchHHHHhhCCCCEEEEEechHhcCCcccceEEEEeCH----
Confidence 8887 46799999999999999999999986442 2110001112 3 558999999998 567889999987
Q ss_pred hhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeEEEEeC
Q 014724 333 GVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 333 ~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~vd~~ 412 (419)
++.+.+.....++ +++....++...+++.. +.+++..+++.++++++.+.|++.|+++.. ...+++|+++.
T Consensus 248 --~~~~~l~~~~~~~---~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~--~~~~~~~~~~~ 318 (369)
T 3cq5_A 248 --AFIDAVMLVRLPY---HLSALSQAAAIVALRHS--ADTLGTVEKLSVERVRVAARLEELGYAVVP--SESNFVFFGDF 318 (369)
T ss_dssp --HHHHHHHTTSCTT---CSCHHHHHHHHHHHHTH--HHHHTHHHHHHHHHHHHHHHHHHHTCEEEC--CSSSEEEEECC
T ss_pred --HHHHHHHHcCCCC---CCCHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHHHHHHhCCCEECC--CCCeEEEEECC
Confidence 6777776543332 23333344444455431 245677888899999999999988998874 34567888874
No 87
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.88 E-value=2.9e-21 Score=195.69 Aligned_cols=281 Identities=17% Similarity=0.124 Sum_probs=179.7
Q ss_pred cccccccCCC-ChHHHHHHHhhhhhccCC-----------CCCCCCCCCCchhHHHHHHHHHHHHHHHHcC----CCCCC
Q 014724 104 SLELIASENF-TSRAVMEAVGSCLTNKYS-----------EGLPGKRYYGGNEYIDELETLCQKRALAAFN----LDENK 167 (419)
Q Consensus 104 ~i~L~~sen~-~~~~V~eal~~~l~~~y~-----------~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g----~~~~~ 167 (419)
.|+|..++|. ..+.+.+++.+....... .+|+. ..| ..++++.+.+++.+.++ ++.+
T Consensus 40 ~i~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~---~~g---~~~l~~~la~~~~~~~~~~~~~~~~- 112 (435)
T 3piu_A 40 IIQMGLAENQLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQD---YHG---LPAFKKAMVDFMAEIRGNKVTFDPN- 112 (435)
T ss_dssp BEECSSCCCCSSHHHHHHHHHHCTTGGGTEETTEECHHHHHHCCC---TTC---CHHHHHHHHHHHHHHTTTSSCCCGG-
T ss_pred eEEeccccccccHHHHHHHHHhCccccccccccccccccccccCC---CCC---cHHHHHHHHHHHHHhhCCCCCCCHH-
Confidence 4688778876 567777777664331110 12221 112 23677666666655544 4443
Q ss_pred CceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCcccccccccc-ccccccEEEecccCCC-CCCCCHHHHHH
Q 014724 168 WGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVS-GTSIYFESMPYRLDES-TGLVDYDMLEK 245 (419)
Q Consensus 168 ~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~-~~g~~~~~v~~~~~~~-~~~iD~d~Le~ 245 (419)
..+++++|++|+..++.++++|||+|++..|.|.++.. .+. ..|. ++++++++++ ++.+|+++|++
T Consensus 113 --~v~~~~gg~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~--------~~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~ 180 (435)
T 3piu_A 113 --HLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDR--------DLKWRTGV--EIVPIHCTSSNGFQITETALEE 180 (435)
T ss_dssp --GEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HTTTTTCC--EEEEEECCGGGTSCCCHHHHHH
T ss_pred --HEEEcCChHHHHHHHHHHhcCCCCeEEECCCccccHHH--------HHHHhcCC--EEEEeeCCCccCCcCCHHHHHH
Confidence 12444556789999999999999999999998877642 122 3455 4455555432 35799999999
Q ss_pred Hhhhc-----CCeEEEEcCCCCCC--cC---ChHHHHHHHHHhCCEEEEeccccccccccCCcCCCC-C---C-------
Q 014724 246 TAILF-----RPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-K---Y------- 304 (419)
Q Consensus 246 ~l~~~-----~pklIi~~~s~~p~--~~---dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~-~---~------- 304 (419)
.+++. ++++|++++|+||+ .. ++++|+++|++||++||+|++|. ++.+.+....++ . .
T Consensus 181 ~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~-~~~~~~~~~~~~~~~~~~~~~d~~~ 259 (435)
T 3piu_A 181 AYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYS-GTAFSSPSFISVMEVLKDRNCDENS 259 (435)
T ss_dssp HHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTG-GGCCSSSCCCCHHHHHHC-------
T ss_pred HHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEecccc-ccccCCCCCcCHHHhcccccccccc
Confidence 99752 78999999888875 33 46889999999999999999975 433333211111 0 1
Q ss_pred --Cc--EEEeCCCCcC--CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhc--ChHHHHHH
Q 014724 305 --CD--VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ--SPEFKVYQ 376 (419)
Q Consensus 305 --~D--iv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~--~~~~~~~~ 376 (419)
.| ++++|+||+| +|.|.|+++++++ ++.+.+......+. . +....++++.++.... ....++..
T Consensus 260 ~~~~~~i~i~s~sK~~g~~G~r~G~~~~~~~-----~~~~~~~~~~~~~~-~--~~~~~~~~~~~l~~~~~~~~~~~~~~ 331 (435)
T 3piu_A 260 EVWQRVHVVYSLSKDLGLPGFRVGAIYSNDD-----MVVAAATKMSSFGL-V--SSQTQHLLSAMLSDKKLTKNYIAENH 331 (435)
T ss_dssp CGGGGEEEEEESSSSSCCGGGCEEEEEESCH-----HHHHHHHHHGGGSC-C--CHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred CCCCCEEEEEeeecccCCCceeEEEEEeCCH-----HHHHHHHHHhhcCC-C--CHHHHHHHHHHhcChHHHHHHHHHHH
Confidence 22 8899999998 6778999999653 56555554322221 1 2222223333333211 12235667
Q ss_pred HHHHHHHHHHHHHHHhCCcEEecCCCcceeEEEEeCC
Q 014724 377 NKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 377 ~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~vd~~~ 413 (419)
+++.++++++.+.|++.|+++..+ ...+++|+++..
T Consensus 332 ~~~~~~~~~l~~~L~~~g~~~~~~-~~g~~~~~~l~~ 367 (435)
T 3piu_A 332 KRLKQRQKKLVSGLQKSGISCLNG-NAGLFCWVDMRH 367 (435)
T ss_dssp HHHHHHHHHHHHHHHTTTCEECCC-CSSSEEEEECGG
T ss_pred HHHHHHHHHHHHHHHhcCCcccCC-CeeEEEEEEccc
Confidence 788889999999999999987753 344789999865
No 88
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.88 E-value=1e-21 Score=198.52 Aligned_cols=273 Identities=15% Similarity=0.168 Sum_probs=171.0
Q ss_pred cccccccC-CCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecC-ChHHHH
Q 014724 104 SLELIASE-NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPL-SGSPAN 181 (419)
Q Consensus 104 ~i~L~~se-n~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~-sGt~A~ 181 (419)
.+.|..++ ..+|+.|++++.+.+.+.+ +||...|..+... .++.+.+++++++++|++++ +|+++ +|++|+
T Consensus 19 ~~~Ld~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~l~~~la~~~g~~~~----~v~~~~g~t~a~ 91 (432)
T 3a9z_A 19 KVYMDYNATTPLEPEVIQAVTEAMKEAW--GNPSSSYVAGRKA-KDIINTARASLAKMIGGKPQ----DIIFTSGGTESN 91 (432)
T ss_dssp CEECBTTTCCCCCHHHHHHHHHHHHHCC--SCTTCSSHHHHHH-HHHHHHHHHHHHHHHTCCGG----GEEEESCHHHHH
T ss_pred cEEeeCCccCCCCHHHHHHHHHHHHHhc--CCCccCcHHHHHH-HHHHHHHHHHHHHHcCCCcC----eEEEeCChHHHH
Confidence 45555544 3579999999998886533 5665444333222 23334567899999999764 24444 558899
Q ss_pred HHHHHHcc--------CCCCEEEEeCCCCCccc-------cCccc-ccccc-ccccccccEEEecccCCCCCCCCHHHHH
Q 014724 182 FEVYTAIL--------KPHDRIMGLDLPHGGHL-------SHGFM-TPKRR-VSGTSIYFESMPYRLDESTGLVDYDMLE 244 (419)
Q Consensus 182 ~~~~~all--------~pGD~Vl~~~~~~~g~~-------s~~~~-~~~~~-i~~~g~~~~~v~~~~~~~~~~iD~d~Le 244 (419)
..++.+++ +|||+|++++|.+.++. .|... ..... ....|. +++.++++++++.+|+++|+
T Consensus 92 ~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~--~v~~v~~~~~~~~~d~~~l~ 169 (432)
T 3a9z_A 92 NLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVA--EVTFVPVSKVNGQVEVEDIL 169 (432)
T ss_dssp HHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSC--EEEEECCCTTTSSCCHHHHH
T ss_pred HHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCc--EEEEEecCcccCCcCHHHHH
Confidence 99998886 58999999988775431 00000 00000 012344 45555555446789999999
Q ss_pred HHhhhcCCeEEEEcCCCCC--CcCChHHHHHHHHHhC----------CEEEEeccccccccccCCcCCCCC--CCcEEEe
Q 014724 245 KTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVG----------ALLMMDMAHISGLVAASVVADPFK--YCDVVTT 310 (419)
Q Consensus 245 ~~l~~~~pklIi~~~s~~p--~~~dl~~I~~ia~~~g----------a~livD~ah~~Gl~~~g~~~~~~~--~~Div~~ 310 (419)
+.+++ ++++|++++++|| ...|+++|.++|+++| ++||+|++|..|.. +..+. +.|++++
T Consensus 170 ~~i~~-~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~~-----~~~~~~~~~d~~~~ 243 (432)
T 3a9z_A 170 AAVRP-TTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKR-----RVDVEDLGVDFLTI 243 (432)
T ss_dssp HTCCT-TEEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTTS-----CCCHHHHCCSEEEE
T ss_pred HhccC-CceEEEEECcccCcccccCHHHHHHHHHhcCcccccccCCceEEEEEchhhhCCc-----ccChhhcCCCEEEE
Confidence 99874 7899999998887 4679999999999999 99999999865521 11121 6899999
Q ss_pred CCCCcCCCCCeeEEEEeCCCcchhhHHHHhhhcccC------CCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHH
Q 014724 311 TTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFP------GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCR 384 (419)
Q Consensus 311 S~hK~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~~------~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~ 384 (419)
|+||++ ||+.|+++++++. ....+....+. ...++++...++++..+++... +++++..+++.++++
T Consensus 244 s~~K~~-g~~~G~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aal~~~~-~~~~~~~~~~~~~~~ 316 (432)
T 3a9z_A 244 VGHKFY-GPRIGALYVRGVG-----KLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLVS-ENCETYEAHMRDIRD 316 (432)
T ss_dssp EGGGTT-CCSCEEEEETTBT-----TTBCCCCSCCSSCGGGGTSCSCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred ehhHhc-CCcceEEEEcccc-----ccCCcCceeecCCccccccCCCcCHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHH
Confidence 999986 7999999998741 01122211110 1123455555666666676554 356788889999999
Q ss_pred HHHHHHHhC-CcEEe
Q 014724 385 ALASRLVEL-GYKLV 398 (419)
Q Consensus 385 ~l~~~L~~~-G~~v~ 398 (419)
++.+.|++. |+++.
T Consensus 317 ~l~~~L~~~~g~~~~ 331 (432)
T 3a9z_A 317 YLEERLEAEFGKRIH 331 (432)
T ss_dssp HHHHHHHHHHGGGEE
T ss_pred HHHHHHHhccCCcEE
Confidence 999999884 76543
No 89
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.88 E-value=3.2e-21 Score=192.06 Aligned_cols=265 Identities=15% Similarity=0.163 Sum_probs=179.9
Q ss_pred cccccccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHH
Q 014724 104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 183 (419)
Q Consensus 104 ~i~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~ 183 (419)
.|+|.. + ..++.+++++.+.+.+.+ + ..+ ....+++ +.+++++|.+. .+++++|++|+..
T Consensus 10 ~i~~~~-p-~~~~~~~~a~~~~~~~~~---~-----~~~-~~~~~l~----~~la~~~~~~~-----~~~~~~gt~al~~ 69 (393)
T 1mdo_A 10 FLPFSR-P-AMGAEELAAVKTVLDSGW---I-----TTG-PKNQELE----AAFCRLTGNQY-----AVAVSSATAGMHI 69 (393)
T ss_dssp CBCSCC-C-CCCHHHHHHHHHHHHHTC---C-----SSS-HHHHHHH----HHHHHHHCCSE-----EEEESCHHHHHHH
T ss_pred ccccCC-C-CCCHHHHHHHHHHHhcCC---c-----CCC-hHHHHHH----HHHHHHhCCCc-----EEEecChHHHHHH
Confidence 455543 3 366888999988876532 1 111 2234444 67888888763 3677888999999
Q ss_pred HHHHc-cCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC
Q 014724 184 VYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 262 (419)
Q Consensus 184 ~~~al-l~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~ 262 (419)
++.++ ++|||+|++++++|.++.. .+...|. +++.++++++++.+|+++|++.+++ ++++|++++ .+
T Consensus 70 ~~~~~~~~~gd~Vl~~~~~~~~~~~--------~~~~~g~--~~~~v~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~-~~ 137 (393)
T 1mdo_A 70 ALMALGIGEGDEVITPSMTWVSTLN--------MIVLLGA--NPVMVDVDRDTLMVTPEHIEAAITP-QTKAIIPVH-YA 137 (393)
T ss_dssp HHHHTTCCTTCEEEEESSSCHHHHH--------HHHHTTC--EEEEECBCTTTCCBCHHHHHHHCCT-TEEEECCBC-GG
T ss_pred HHHHcCCCCCCEEEeCCCccHhHHH--------HHHHCCC--EEEEEeccCCcCCCCHHHHHHhcCC-CceEEEEeC-CC
Confidence 99999 9999999999998876531 2334565 5555556655578999999999975 789888775 34
Q ss_pred CCcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCCC-CcEEEeCCC--CcCCCCCeeEEEEeCCCcchhhHHHH
Q 014724 263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKY-CDVVTTTTH--KSLRGPRGGMIFFKKDPVLGVELESA 339 (419)
Q Consensus 263 p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~~-~Div~~S~h--K~l~GprgG~i~~~~~~~~~~~l~~~ 339 (419)
+...|+++|.++|+++|++||+|++|..|..+.+. ++ + .|++++|+| |+++|+++|+++++++ ++.+.
T Consensus 138 G~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~---~~-~~~d~~~~S~~k~K~l~~~~~g~~~~~~~-----~~~~~ 208 (393)
T 1mdo_A 138 GAPADLDAIYALGERYGIPVIEDAAHATGTSYKGR---HI-GARGTAIFSFHAIKNITCAEGGIVVTDNP-----QFADK 208 (393)
T ss_dssp GCCCCHHHHHHHHHHHTCCBCEECTTCTTCEETTE---ET-TSSSEEEEECCTTSSSCSSSCEEEEESCH-----HHHHH
T ss_pred CCcCCHHHHHHHHHHcCCeEEEECccccCCeECCe---ec-CCCCeEEEeCCCCCccccccceEEEeCCH-----HHHHH
Confidence 55679999999999999999999999877554321 11 3 799999999 9998889999999743 55555
Q ss_pred hhhcccCC--------------------CCCC-ChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEe
Q 014724 340 INNAVFPG--------------------LQGG-PHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLV 398 (419)
Q Consensus 340 i~~~~~~~--------------------~~g~-p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~ 398 (419)
+......+ ..|. ...+.+.+ +.++..+ ..+++..++..++++++.+.|.+.++++.
T Consensus 209 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-a~~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 285 (393)
T 1mdo_A 209 LRSLKFHGLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLNA-AIALAQL--QKLDALNARRAAIAAQYHQAMADLPFQPL 285 (393)
T ss_dssp HHHHTBTTEECC-----------CCEESSCCCBCCCCHHHH-HHHHHHH--HTHHHHHHHHHHHHHHHHHHHHTSSCEEC
T ss_pred HHHHHhcCCcccchhhhcccccccccccccCccCCCCHHHH-HHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcCCcccc
Confidence 43321111 0111 01111211 1122222 23566777788899999999999887765
Q ss_pred cCC-----CcceeEEEEeC
Q 014724 399 SGG-----SDNHLVLVDLR 412 (419)
Q Consensus 399 ~~~-----t~~hlv~vd~~ 412 (419)
... ...+++|+++.
T Consensus 286 ~~~~~~~~~~~~~~~v~~~ 304 (393)
T 1mdo_A 286 SLPSWEHIHAWHLFIIRVD 304 (393)
T ss_dssp CCCSSCEECCCSCEEEECC
T ss_pred cCCCCCCCceeEEEEEEec
Confidence 211 34567888875
No 90
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.87 E-value=1.1e-21 Score=196.02 Aligned_cols=242 Identities=10% Similarity=0.084 Sum_probs=165.7
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHH-HHHcCCCCCCCceeEecCChHHHHHHHHHHc-cCC
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRA-LAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKP 191 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~l-a~~~g~~~~~~~v~V~~~sGt~A~~~~~~al-l~p 191 (419)
.++.+++++.+.+.+.+. .. + | +...++| +.+ ++++|... ..+.++||+.|+..++.++ ++|
T Consensus 14 ~~~~i~~a~~~~~~~~~~---~~---~-~-~~~~~l~----~~~~a~~~g~~~----~~v~~~sgt~al~~al~~l~~~~ 77 (377)
T 3ju7_A 14 PVIEYLDELKEIDASHIY---TN---Y-G-PINQRFE----QTIMSGFFQNRG----AVTTVANATLGLMAAIQLKKRKK 77 (377)
T ss_dssp CGGGGHHHHHHHHHHTCC---SS---S-C-HHHHHHH----HHHHHHTSTTCS----EEEEESCHHHHHHHHHHHHSCTT
T ss_pred CcHHHHHHHHHHHHcCCc---cc---C-C-HHHHHHH----HHHHHHHhCCCC----eEEEeCCHHHHHHHHHHHcCCCC
Confidence 578888888888765431 10 1 2 3345665 567 88999322 1478899999999999998 999
Q ss_pred CCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcC--CeEEEEcCCCCCCcCChH
Q 014724 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFR--PKLIIAGASAYPRDFDYP 269 (419)
Q Consensus 192 GD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~--pklIi~~~s~~p~~~dl~ 269 (419)
||+|++++++|.++.. .+...|. +++.++++++++.+|++++++.+...+ +|+|+..++ ++...|++
T Consensus 78 Gd~Vi~~~~~~~~~~~--------~~~~~G~--~~~~v~~~~~~~~~d~~~l~~~i~~~~~~tk~v~~~~~-~G~~~~~~ 146 (377)
T 3ju7_A 78 GKYALMPSFTFPATPL--------AAIWCGL--EPYFIDISIDDWYMDKTVLWDKIEELKEEVAIVVPYAT-FGSWMNLE 146 (377)
T ss_dssp CCEEEEESSSCTHHHH--------HHHHTTC--EEEEECBCTTTCSBCHHHHHHHHHHHGGGEEEECCBCG-GGBCCCCH
T ss_pred cCEEEECCCCcHHHHH--------HHHHcCC--EEEEEecCCccCCcCHHHHHHHHhcCCCCceEEEEECC-CCCccCHH
Confidence 9999999998877542 2334565 556666666678999999999884335 888886543 45678999
Q ss_pred HHHHHHHHhCCEEEEeccccccccccCCcC-CCCCCCcEEEeC--CCCcCCCCCeeEEEEeCCCcchhhHHHHhhhcccC
Q 014724 270 RMRQIADAVGALLMMDMAHISGLVAASVVA-DPFKYCDVVTTT--THKSLRGPRGGMIFFKKDPVLGVELESAINNAVFP 346 (419)
Q Consensus 270 ~I~~ia~~~ga~livD~ah~~Gl~~~g~~~-~~~~~~Div~~S--~hK~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~~ 346 (419)
+|.++|+ ||++||+|++|..|....+... .. ..|+.++| .||+++++.||+++++++ ++.+++......
T Consensus 147 ~i~~la~-~~~~vi~D~a~a~g~~~~~~~~g~~--~~d~~~~S~~~~K~l~~g~gG~~~~~~~-----~l~~~~~~~~~~ 218 (377)
T 3ju7_A 147 EYEELEK-KGVPVVVDAAPGFGLMNGGMHYGQD--FSGMIIYSFHATKPFGIGEGGLIYSKNE-----EDIQRIKRMGNF 218 (377)
T ss_dssp HHHHHHH-TTCCBEEECTTCTTCEETTEETTTT--CSSEEEEECBTTSSSCCBSCEEEEESCH-----HHHHHHHHHTBT
T ss_pred HHHHHHh-cCCEEEEECCCccCCeECCEeccCC--CCcEEEEECCCCCcCCCCCcEEEEECCH-----HHHHHHHHHHhc
Confidence 9999999 9999999999988865433211 11 35655555 579998788999998875 666665543222
Q ss_pred CCC--------C-CChH-HHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCC
Q 014724 347 GLQ--------G-GPHN-HTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG 394 (419)
Q Consensus 347 ~~~--------g-~p~~-~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G 394 (419)
+.. | +..+ ...+++ ++.++ +.++.+.++..++++++.+.|++.+
T Consensus 219 g~~~~~~~~~~g~~~~~~~~~aa~--~~~~l--~~l~~~~~~~~~~~~~~~~~L~~~~ 272 (377)
T 3ju7_A 219 GFDTNRECTMMGFNCKMSEYAAAI--GIATM--KKWDDKLKERTRISEWYKQLLQSNG 272 (377)
T ss_dssp TBCTTSCBCSSCCBCCCCHHHHHH--HHHHH--HTHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCCCceeeccccCCCCHHHHHH--HHHHH--HHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 210 1 1111 222222 23333 3467788889999999999999875
No 91
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.87 E-value=1.1e-20 Score=189.35 Aligned_cols=262 Identities=14% Similarity=0.125 Sum_probs=175.1
Q ss_pred CCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHc-cC
Q 014724 112 NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LK 190 (419)
Q Consensus 112 n~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~al-l~ 190 (419)
..+++++++++.+.+.+.|. +. .| +...+++ +.+++++|.+. .+++++|++|+..++.++ ++
T Consensus 8 p~~~~~v~~a~~~~~~~~~~---~~----~g-~~~~~l~----~~la~~~~~~~-----v~~~~ggt~al~~~~~~l~~~ 70 (394)
T 1o69_A 8 PHMGGNELKYIEEVFKSNYI---AP----LG-EFVNRFE----QSVKDYSKSEN-----ALALNSATAALHLALRVAGVK 70 (394)
T ss_dssp ----CCHHHHHHHHHHHTTT---SC----TT-HHHHHHH----HHHHHHHCCSE-----EEEESCHHHHHHHHHHHTTCC
T ss_pred CCCCHHHHHHHHHHHHcCCc---cC----CC-hHHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHcCCC
Confidence 34677888888888765432 10 12 2234444 67788888743 266777899999999999 99
Q ss_pred CCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhc--CCeEEEEcCCCCCCcCCh
Q 014724 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAGASAYPRDFDY 268 (419)
Q Consensus 191 pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~--~pklIi~~~s~~p~~~dl 268 (419)
|||+|++++++|.++.. .+...|. +++.++++ +++.+|+++|++.+++. ++++|++++ .++...|+
T Consensus 71 ~gd~Vl~~~~~~~~~~~--------~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~~~v~~~~-~~G~~~~l 138 (394)
T 1o69_A 71 QDDIVLASSFTFIASVA--------PICYLKA--KPVFIDCD-ETYNIDVDLLKLAIKECEKKPKALILTH-LYGNAAKM 138 (394)
T ss_dssp TTCEEEEESSSCGGGTH--------HHHHTTC--EEEEECBC-TTSSBCHHHHHHHHHHCSSCCCEEEEEC-GGGCCCCH
T ss_pred CCCEEEECCCccHHHHH--------HHHHcCC--EEEEEEeC-CCCCcCHHHHHHHHhcccCCceEEEEEC-CCCChhhH
Confidence 99999999998877642 2334555 45555565 56889999999998754 689988876 34567899
Q ss_pred HHHHHHHHHhCCEEEEeccccccccccCCcCCCCCCCcEEEeCCCCcCCCCCeeEEEEeCCCcchhhHHHHhhhcccCC-
Q 014724 269 PRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPG- 347 (419)
Q Consensus 269 ~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~~~Div~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~- 347 (419)
++|.++|+++|++||+|++|..|..+.+.....+..+|+.++|.||.++|+++|+++++++ ++.+.+......+
T Consensus 139 ~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~~~~s~s~~K~l~~~~~G~~~~~~~-----~l~~~l~~~~~~~~ 213 (394)
T 1o69_A 139 DEIVEICKENDIVLIEDAAEALGSFYKNKALGTFGEFGVYSYNGNKIITTSGGGMLIGKNK-----EKIEKARFYSTQAR 213 (394)
T ss_dssp HHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCCSSCEEEEESCH-----HHHHHHHHHTBTCC
T ss_pred HHHHHHHHHcCCEEEEECcCcccceeCCcccccccCcEEEEEeCCccCCCCCceEEEECCH-----HHHHHHHHHHHhcc
Confidence 9999999999999999999977766544211122356788888899998889999999643 5665554322111
Q ss_pred -----CCCCC------hHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCC----CcceeEEEEeC
Q 014724 348 -----LQGGP------HNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGG----SDNHLVLVDLR 412 (419)
Q Consensus 348 -----~~g~p------~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~----t~~hlv~vd~~ 412 (419)
.+... ..+..+++ ++..+ +.+++..+++.++++++.+.|++. +++.... ...|++++.+.
T Consensus 214 ~~~~~~~~~~~g~~~~~~~~~aa~--~l~~l--~~l~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~i~~~ 288 (394)
T 1o69_A 214 ENCLHYEHLDYGYNYRLSNVLGAI--GVAQM--EVLEQRVLKKREIYEWYKEFLGEY-FSFLDELENSRSNRWLSTALIN 288 (394)
T ss_dssp CSSSSCCCSSCCCBCBCCHHHHHH--HHHHH--TTHHHHHHHHHHHHHHHHHHHTTT-EECCCCCTTEECCCSSEEEEES
T ss_pred ccCccccccccCcccCcCHHHHHH--HHHHH--HHHHHHHHHHHHHHHHHHHHhccc-ccccCCCCCCcceeEEEEEEec
Confidence 11000 01112222 23332 235667888999999999999988 7665431 12246777775
No 92
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.87 E-value=8.7e-21 Score=189.99 Aligned_cols=304 Identities=15% Similarity=0.036 Sum_probs=188.7
Q ss_pred hccccccChhHHHHHHHHHHH--hh--hcccccccC-C---CChHHHHHHHhhhhhccC--CCCCCCCCCCCchhHHHHH
Q 014724 80 DYSLGEADPEVCEIITKEKER--QF--KSLELIASE-N---FTSRAVMEAVGSCLTNKY--SEGLPGKRYYGGNEYIDEL 149 (419)
Q Consensus 80 ~~~l~~~~~~~~~~~~~e~~r--~~--~~i~L~~se-n---~~~~~V~eal~~~l~~~y--~~g~p~~r~~~g~~~~~~l 149 (419)
++++..+.+..+..+.+...+ .. +.|+|..+. + +.++.+++++.+.+.+.. .. |+. .....++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~-y~~------~~~~~~l 80 (407)
T 2zc0_A 8 AGRANWIKGSALADVMKKASELQKKGVKLISLAAGDPDPELIPRAVLGEIAKEVLEKEPKSVM-YTP------ANGIPEL 80 (407)
T ss_dssp CGGGGGCCCCHHHHHHHHHHHHHHSSCCCEECCSCCCCTTTSCHHHHHHHHHHHHHHCGGGGS-CCC------TTCCHHH
T ss_pred hhhhccCCchHHHHHHHhhhcccCCCCceEeCCCCCCCchhCCHHHHHHHHHHHHhhcccccc-CCC------CCCCHHH
Confidence 445555665543333222221 23 567886553 2 257889999888775421 11 221 1112467
Q ss_pred HHHHHHHHHHHcCCCCCCCceeEecCCh-HHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEe
Q 014724 150 ETLCQKRALAAFNLDENKWGVNVQPLSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMP 228 (419)
Q Consensus 150 E~~~~~~la~~~g~~~~~~~v~V~~~sG-t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~ 228 (419)
++.+.+++.+.+|.+.+. .+|++++| ++|+..++.++++|||+|++.+|.|.++.. .+...|. +++.
T Consensus 81 ~~~la~~~~~~~g~~~~~--~~v~~t~g~t~a~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~--~~~~ 148 (407)
T 2zc0_A 81 REELAAFLKKYDHLEVSP--ENIVITIGGTGALDLLGRVLIDPGDVVITENPSYINTLL--------AFEQLGA--KIEG 148 (407)
T ss_dssp HHHHHHHHHHHSCCCCCG--GGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHH--------HHHTTTC--EEEE
T ss_pred HHHHHHHHHHhcCCCCCc--ceEEEecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHH--------HHHHcCC--EEEE
Confidence 766667777767853211 13555555 789999999999999999999998766531 2334555 4444
Q ss_pred cccCCCCCCCCHHHHHHHhh----h-cCCeEE-EEcCCCCCC--cCChH---HHHHHHHHhCCEEEEeccccccccccCC
Q 014724 229 YRLDESTGLVDYDMLEKTAI----L-FRPKLI-IAGASAYPR--DFDYP---RMRQIADAVGALLMMDMAHISGLVAASV 297 (419)
Q Consensus 229 ~~~~~~~~~iD~d~Le~~l~----~-~~pklI-i~~~s~~p~--~~dl~---~I~~ia~~~ga~livD~ah~~Gl~~~g~ 297 (419)
++.++ ++ +|+++|++.++ + .++++| ++++++||+ ..+.+ +|+++|++||++||+|++|..+ ...+.
T Consensus 149 v~~~~-~~-~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~-~~~~~ 225 (407)
T 2zc0_A 149 VPVDN-DG-MRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFM-RYEGG 225 (407)
T ss_dssp EEEET-TE-ECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTS-BSSCS
T ss_pred cccCC-CC-CCHHHHHHHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCccc-ccCCC
Confidence 44543 33 99999999987 4 367887 467777774 45554 9999999999999999997543 33222
Q ss_pred cCCCC---C--CCcEEEeCCCCcCC-CCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhc-C-
Q 014724 298 VADPF---K--YCDVVTTTTHKSLR-GPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ-S- 369 (419)
Q Consensus 298 ~~~~~---~--~~Div~~S~hK~l~-GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~-~- 369 (419)
...++ + +.+++++|+||+|. |.|+|++++++ ++.+.+.........+++... ..++..+++... .
T Consensus 226 ~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~ 298 (407)
T 2zc0_A 226 DIVPLKALDNEGRVIVAGTLSKVLGTGFRIGWIIAEG------EILKKVLMQKQPIDFCAPAIS-QYIALEYLKRGYFEK 298 (407)
T ss_dssp SCCCGGGGCSSCCEEEEEESTTTTCTTSCCEEEECCH------HHHHHHHHHHTTTTSSSCHHH-HHHHHHHHHTTHHHH
T ss_pred CCCChhhcCCCCCEEEEcccccccCCCcceEEEecCH------HHHHHHHHHHHhhcCCCCHHH-HHHHHHHHHcCCchH
Confidence 11111 1 24578999999984 56899999976 677766654333323333222 333333443320 1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhC--CcEEecCCCcceeEEEEeCC
Q 014724 370 PEFKVYQNKVVSNCRALASRLVEL--GYKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 370 ~~~~~~~~~v~~n~~~l~~~L~~~--G~~v~~~~t~~hlv~vd~~~ 413 (419)
..+++..+++.++++++.+.|++. |+++.. ....+++|+++..
T Consensus 299 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~~~~~~~~~~~ 343 (407)
T 2zc0_A 299 YHLEGALLGYKEKRDIMLKALENHLPNAEFTK-PIAGMFVMFFLPE 343 (407)
T ss_dssp HTTTTHHHHHHHHHHHHHHHHHHHCTTSCBCC-CSBSSEEEEECST
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCEEec-CCCcEEEEEEcCC
Confidence 223556777888899999999873 677653 2345678998853
No 93
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.87 E-value=1.4e-21 Score=193.71 Aligned_cols=251 Identities=20% Similarity=0.175 Sum_probs=171.9
Q ss_pred cccccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHH
Q 014724 106 ELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVY 185 (419)
Q Consensus 106 ~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~ 185 (419)
++..+...+++++++++.+.+...+ |+.+ +...++| +.+++++|.+. .++++||++|++.++
T Consensus 6 ~~~~~~~~~~~~v~~a~~~~~~~~~--------~~~~-~~~~~l~----~~la~~~~~~~-----~~~~~sGt~al~~al 67 (367)
T 3nyt_A 6 DLKNQQARIKDKIDAGIQRVLRHGQ--------YILG-PEVTELE----DRLADFVGAKY-----CISCANGTDALQIVQ 67 (367)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHCC--------CSSC-HHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHH
T ss_pred cccccccccCHHHHHHHHHHHhcCC--------ccCC-hHHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHH
Confidence 3444444567889999888775432 1112 3344554 67888889874 377889999999999
Q ss_pred HHc-cCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC
Q 014724 186 TAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR 264 (419)
Q Consensus 186 ~al-l~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~ 264 (419)
.++ ++|||+|+++.++|.++.. .+...|. +++.++++++++.+|+++|++.+++ ++++|+.+++ ++.
T Consensus 68 ~~~~~~~gd~Vi~~~~~~~~~~~--------~~~~~G~--~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~-~G~ 135 (367)
T 3nyt_A 68 MALGVGPGDEVITPGFTYVATAE--------TVALLGA--KPVYVDIDPRTYNLDPQLLEAAITP-RTKAIIPVSL-YGQ 135 (367)
T ss_dssp HHTTCCTTCEEEEESSSCTHHHH--------HHHHTTC--EEEEECBCTTTCSBCGGGTGGGCCT-TEEEECCBCG-GGC
T ss_pred HHhCCCCcCEEEECCCccHHHHH--------HHHHcCC--EEEEEecCCccCCcCHHHHHHhcCc-CCcEEEeeCC-ccC
Confidence 999 8999999999998876542 2334454 5666667766689999999999864 7888885442 345
Q ss_pred cCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCCCCcEEEeCC--CCcCCC-CCeeEEEEeCCCcchhhHHHHhh
Q 014724 265 DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTT--HKSLRG-PRGGMIFFKKDPVLGVELESAIN 341 (419)
Q Consensus 265 ~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~~~Div~~S~--hK~l~G-prgG~i~~~~~~~~~~~l~~~i~ 341 (419)
..|+++|.++|+++|++||+|++|..|....+..... ..|++++|+ ||++++ ..||+++++++ ++.+++.
T Consensus 136 ~~~~~~i~~la~~~~~~li~D~a~~~g~~~~~~~~~~--~~di~~~Sf~~~K~l~~~g~gg~~~~~~~-----~l~~~~~ 208 (367)
T 3nyt_A 136 CADFDAINAIASKYGIPVIEDAAQSFGASYKGKRSCN--LSTVACTSFFPSAPLGCYGDGGAIFTNDD-----ELATAIR 208 (367)
T ss_dssp CCCHHHHHHHHHHTTCCBEEECTTTTTCEETTEETTS--SSSEEEEECCTTSSSCCSSCCEEEEESCH-----HHHHHHH
T ss_pred hhhHHHHHHHHHHcCCEEEEECccccCCeECCeeccC--CCCEEEEECCCCCcCCCcCceeEEEeCCH-----HHHHHHH
Confidence 6799999999999999999999998776644321111 239999996 899966 46899998764 5666554
Q ss_pred hcccCC-----------CCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEe
Q 014724 342 NAVFPG-----------LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLV 398 (419)
Q Consensus 342 ~~~~~~-----------~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~ 398 (419)
.....+ .....+ ...+++ ++..+ +.++++.++..++++++.+.|.+.|+.+.
T Consensus 209 ~~~~~g~~~~~~~~~~g~~~~~~-~~~aa~--~~~~l--~~~~~~~~~~~~~~~~~~~~L~~~~~~~~ 271 (367)
T 3nyt_A 209 QIARHGQDRRYHHIRVGVNSRLD-TLQAAI--LLPKL--EIFEEEIALRQKVAAEYDLSLKQVGIGTP 271 (367)
T ss_dssp HHTBTTEEETTEECSCCCBCCCC-HHHHHH--HHHHH--HTHHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred HHHhcCCCcCceeeccCcCCCcc-HHHHHH--HHHHH--HHHHHHHHHHHHHHHHHHHHhccCCeecc
Confidence 322211 111111 112222 22222 23466778888899999999999887654
No 94
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.87 E-value=2.9e-21 Score=199.25 Aligned_cols=275 Identities=14% Similarity=0.107 Sum_probs=186.0
Q ss_pred hHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCC-CCCCceeEecCChHHHHHHHHHHccC---
Q 014724 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGSPANFEVYTAILK--- 190 (419)
Q Consensus 115 ~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~-~~~~~v~V~~~sGt~A~~~~~~all~--- 190 (419)
++.+.+++.+.+.. +...++. .+.......++|+.+++++++++|++ ..++ .+++++|++|+..++.++.+
T Consensus 77 ~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~--~~~~~ggt~a~~~a~~a~~~~~~ 151 (497)
T 3mc6_A 77 GDDLIHLQTIAYEK-YCVANQL--HPDVFPAVRKMESEVVSMVLRMFNAPSDTGC--GTTTSGGTESLLLACLSAKMYAL 151 (497)
T ss_dssp CHHHHHHHHHHHHH-TSSCBTT--CTTTCHHHHHHHHHHHHHHHHHTTCCTTTCC--EEEESSHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHH-HhhcCCC--CcccChHHHHHHHHHHHHHHHHhCCCCCCCe--EEEcCcHHHHHHHHHHHHHHHHH
Confidence 46677777666543 2111111 12223445688888999999999998 2222 36667788999999998865
Q ss_pred --CC---CEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--
Q 014724 191 --PH---DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP-- 263 (419)
Q Consensus 191 --pG---D~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p-- 263 (419)
+| |+|+++.+.|.++. +.+...|.. ++.++++++++.+|+++|++++++ ++++|++++++||
T Consensus 152 ~~~g~~~~~Vi~~~~~h~~~~--------~~~~~~G~~--~~~v~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG 220 (497)
T 3mc6_A 152 HHRGITEPEIIAPVTAHAGFD--------KAAYYFGMK--LRHVELDPTTYQVDLGKVKKFINK-NTVLLVGSAPNFPHG 220 (497)
T ss_dssp HHSCCSSCEEEEETTSCHHHH--------HHHHHSCCE--EEEECBCTTTCSBCTTTTGGGCCS-SEEEEEEETTCTTTC
T ss_pred hcCCCCCceEEEeCCccHHHH--------HHHHHcCCe--EEEEecCcccCcCCHHHHHHHHhh-CCEEEEEECCCCCCC
Confidence 56 89999998876643 133455664 444445544688999999999975 7899999988876
Q ss_pred CcCChHHHHHHHHHhCCEEEEeccccccccc----c--CCc-CCCC--CCCcEEEeCCCCcCCCC-CeeEEEEeCCCcch
Q 014724 264 RDFDYPRMRQIADAVGALLMMDMAHISGLVA----A--SVV-ADPF--KYCDVVTTTTHKSLRGP-RGGMIFFKKDPVLG 333 (419)
Q Consensus 264 ~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~----~--g~~-~~~~--~~~Div~~S~hK~l~Gp-rgG~i~~~~~~~~~ 333 (419)
...|+++|+++|++||++||+|++|..+... . +.. +..+ .++|++++|+||++.|| +.|+++++++
T Consensus 221 ~~~~l~~i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~---- 296 (497)
T 3mc6_A 221 IADDIEGLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVPGVTSISCDTHKYGFAPKGSSVIMYRNS---- 296 (497)
T ss_dssp CCCSCTTTTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCSTTSTTCCEEEEETTTTTCCCSSCEEEECSSH----
T ss_pred cCCCHHHHHHHHHHhCCEEEEECcchhhhhhhhhhhcccCCccccccCCCCcEEEECchhhcCCCCCceeEEecCH----
Confidence 4679999999999999999999998644321 0 111 1111 27899999999997555 5699988873
Q ss_pred hhHHHHhhhcccCC----------CCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC--CcEEecCC
Q 014724 334 VELESAINNAVFPG----------LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLVSGG 401 (419)
Q Consensus 334 ~~l~~~i~~~~~~~----------~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~--G~~v~~~~ 401 (419)
..........+. ..++.....++++.+++..+...+++++.+++.++++++++.|++. |++++..
T Consensus 297 --~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~- 373 (497)
T 3mc6_A 297 --DLRMHQYYVNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMGENGYIESCQEIVGAAMKFKKYIQENIPDLDIMGN- 373 (497)
T ss_dssp --HHHTTTSCCBTTCTTSCBCCSSSCSSCBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCEECSC-
T ss_pred --HHHhhhhcccccccCCCcCCcCcccCCcchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecC-
Confidence 333222111111 1223333335556666766655667888999999999999999994 9998753
Q ss_pred CcceeEEEEeC
Q 014724 402 SDNHLVLVDLR 412 (419)
Q Consensus 402 t~~hlv~vd~~ 412 (419)
....++.++..
T Consensus 374 ~~~~~v~~~~~ 384 (497)
T 3mc6_A 374 PRYSVISFSSK 384 (497)
T ss_dssp CCSSEEEEECT
T ss_pred CCeeEEEEeCC
Confidence 34455666543
No 95
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.87 E-value=8.2e-21 Score=193.89 Aligned_cols=304 Identities=13% Similarity=0.021 Sum_probs=190.5
Q ss_pred hhccccccChhHHHHHHHHHHHhhhcccccccC-C---CChHHHHHHHhhhhhccC--CCCCCCCCCCCchhHHHHHHHH
Q 014724 79 VDYSLGEADPEVCEIITKEKERQFKSLELIASE-N---FTSRAVMEAVGSCLTNKY--SEGLPGKRYYGGNEYIDELETL 152 (419)
Q Consensus 79 ~~~~l~~~~~~~~~~~~~e~~r~~~~i~L~~se-n---~~~~~V~eal~~~l~~~y--~~g~p~~r~~~g~~~~~~lE~~ 152 (419)
++++.....+..+..+.+... ..+.|+|..+. + +.++.+.+++.+.+.+.. ..+|+.. .| ..++++.
T Consensus 54 ~s~~~~~~~~s~~~~~~~~~~-~~~~i~l~~g~p~~~~~p~~~v~~a~~~~l~~~~~~~~~Y~~~---~g---~~~lr~~ 126 (448)
T 3aow_A 54 FSKKALEMRASEVRELLKLVE-TSDIISLAGGLPNPKTFPKEIIRDILVEIMEKYADKALQYGTT---KG---FTPLRET 126 (448)
T ss_dssp CCHHHHHCCCCHHHHHHHHHH-TSSSEECCCCCCCGGGSCHHHHHHHHHHHHHHSHHHHHSCCCT---TC---CHHHHHH
T ss_pred hhHHHhcCCCcHHHHHHHhcc-CCCcEeCCCCCCCchhCCHHHHHHHHHHHHHhhhHHHhCCCCC---CC---cHHHHHH
Confidence 445555555554333332222 34567886553 2 257889998887765321 1133221 12 2366666
Q ss_pred HHHHHHHHcCCCCCCCceeEecCC-hHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEeccc
Q 014724 153 CQKRALAAFNLDENKWGVNVQPLS-GSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 231 (419)
Q Consensus 153 ~~~~la~~~g~~~~~~~v~V~~~s-Gt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~ 231 (419)
+.+++.+.+|.+ +.+ +|++++ |++|+..++.++++|||+|++.+|.|.++.. .+...|. +++.++.
T Consensus 127 ia~~~~~~~g~~-~~~--~v~~t~G~~~al~~~~~~l~~~Gd~Vlv~~p~y~~~~~--------~~~~~g~--~~~~v~~ 193 (448)
T 3aow_A 127 LMKWLGKRYGIS-QDN--DIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQ--------AFNFYEP--QYIQIPL 193 (448)
T ss_dssp HHHHHHHHHCCC-TTS--EEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHH--------HHHTTCC--EEEEEEE
T ss_pred HHHHHHHhcCcC-Chh--hEEEeCcHHHHHHHHHHHHcCCCCEEEEeCCChHHHHH--------HHHHcCC--EEEEecc
Confidence 666666667984 212 344454 5789999999999999999999998876542 2234555 4455555
Q ss_pred CCCCCCCCHHHHHHHhh----h-cCCeEEE-EcCCCCCC--cC---ChHHHHHHHHHhCCEEEEeccccccccccCCcCC
Q 014724 232 DESTGLVDYDMLEKTAI----L-FRPKLII-AGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVAD 300 (419)
Q Consensus 232 ~~~~~~iD~d~Le~~l~----~-~~pklIi-~~~s~~p~--~~---dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~ 300 (419)
++ + .+|+++|++.++ + .++|+|+ +.+++||+ .. ++++|.++|++||++||+|++|.. +.+.+....
T Consensus 194 ~~-~-g~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~-~~~~g~~~~ 270 (448)
T 3aow_A 194 DD-E-GMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGE-LRYSGNPEK 270 (448)
T ss_dssp ET-T-EECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTT-CBCSSCCCC
T ss_pred CC-C-CCCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCcc-ccCCCCCCc
Confidence 53 3 399999999986 3 3788874 67778875 33 367899999999999999999753 444332111
Q ss_pred CC---C--CCcEEEeCCCCcC-CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHh-cChHHH
Q 014724 301 PF---K--YCDVVTTTTHKSL-RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHA-QSPEFK 373 (419)
Q Consensus 301 ~~---~--~~Div~~S~hK~l-~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~-~~~~~~ 373 (419)
++ + +.+++++|++|+| +|+|.|++++++ ++.+.+.........+. +....+++..+|+.. .....+
T Consensus 271 ~~~~~~~~~~vi~~~S~SK~~~~GlriG~v~~~~------~l~~~l~~~~~~~~~~~-~~~~q~a~~~~L~~~~~~~~~~ 343 (448)
T 3aow_A 271 KIKALDNEGRVIYLGTFSKILAPGFRIGWMVGDP------GIIRKMEIAKQSTDLCT-NVFGQVVAWRYVDGGYLEKHIP 343 (448)
T ss_dssp CTGGGCTTSCEEEEEESTTTTCGGGCCEEEEECH------HHHHHHHHHHHHHHSSC-CHHHHHHHHHHHHTTHHHHHHH
T ss_pred CHHhcCCCCCEEEEccchhhccccccEEEEEeCH------HHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHhCCHHHHHH
Confidence 12 2 3468899999998 467889999987 66666554322222222 222333333344431 012345
Q ss_pred HHHHHHHHHHHHHHHHHHhC---CcEEecCCCcceeEEEEeCC
Q 014724 374 VYQNKVVSNCRALASRLVEL---GYKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 374 ~~~~~v~~n~~~l~~~L~~~---G~~v~~~~t~~hlv~vd~~~ 413 (419)
+..+++.++++++.+.|++. |+++..+ ....++|+++..
T Consensus 344 ~~~~~~~~~~~~l~~~L~~~~~~g~~~~~p-~~g~~~~v~~~~ 385 (448)
T 3aow_A 344 EIRKFYKPRRDAMLEALEEFMPEGVKWTKP-EGGMFIWVTLPD 385 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCTTCEECCC-SBSSEEEEECST
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCeEEeCC-CccEEEEEEcCC
Confidence 66677778899999999874 7887542 345678999853
No 96
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.87 E-value=1.4e-20 Score=190.15 Aligned_cols=281 Identities=15% Similarity=0.109 Sum_probs=180.4
Q ss_pred cccccccCCC-ChHHHHHHHhhhhhcc----------CCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcC----CCCCCC
Q 014724 104 SLELIASENF-TSRAVMEAVGSCLTNK----------YSEGLPGKRYYGGNEYIDELETLCQKRALAAFN----LDENKW 168 (419)
Q Consensus 104 ~i~L~~sen~-~~~~V~eal~~~l~~~----------y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g----~~~~~~ 168 (419)
.|+|..++|. .++.|.+++.+..... ....|+.. .| ..++++.+.+++.+.+| ++++
T Consensus 38 ~i~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~---~g---~~~lr~~la~~~~~~~g~~~~~~~~-- 109 (428)
T 1iay_A 38 VIQMGLAENQLCLDLIEDWIKRNPKGSICSEGIKSFKAIANFQDY---HG---LPEFRKAIAKFMEKTRGGRVRFDPE-- 109 (428)
T ss_dssp BEECSSCCCCSSHHHHHHHHHHCTTSSTTC----CHHHHHHCCCT---TC---CHHHHHHHHHHHHHHTTTCSCCCTT--
T ss_pred eeeeccccchhhHHHHHHHHHhccccccccccccccHhhcCCCCC---CC---cHHHHHHHHHHHHHhcCCCCCCChh--
Confidence 4677777765 4567777776432100 00123221 12 23677666677777777 4443
Q ss_pred ceeEecCCh-HHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCC-CCCCCHHHHHHH
Q 014724 169 GVNVQPLSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKT 246 (419)
Q Consensus 169 ~v~V~~~sG-t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~-~~~iD~d~Le~~ 246 (419)
+|++++| ++|+..++.++++|||+|++++|.|.++.. . .....|. ++++++.+++ ++.+|+++|++.
T Consensus 110 --~i~~~~G~~~ai~~~~~~~~~~gd~Vl~~~p~y~~~~~-~------~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~ 178 (428)
T 1iay_A 110 --RVVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNR-D------LRWRTGV--QLIPIHCESSNNFKITSKAVKEA 178 (428)
T ss_dssp --SCEEEEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHH-H------TTTTTCC--EEEEECCCTTTTTCCCHHHHHHH
T ss_pred --hEEEccChHHHHHHHHHHhCCCCCeEEEccCCCcchHH-H------HHHhcCC--EEEEeecCCccCCcCCHHHHHHH
Confidence 2455555 679999999999999999999999877531 1 0123455 4455555432 457999999999
Q ss_pred hhh-----cCCeEEEEcCCCCCC--cCC---hHHHHHHHHHhCCEEEEeccccccccccCC-cCCC--CC-C-------C
Q 014724 247 AIL-----FRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASV-VADP--FK-Y-------C 305 (419)
Q Consensus 247 l~~-----~~pklIi~~~s~~p~--~~d---l~~I~~ia~~~ga~livD~ah~~Gl~~~g~-~~~~--~~-~-------~ 305 (419)
+++ .++++|++++|+||+ ..+ +++|.++|+++|++||+|++|.. +.+.+. ..+. +. . .
T Consensus 179 l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (428)
T 1iay_A 179 YENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAA-TVFDTPQFVSIAEILDEQEMTYCNK 257 (428)
T ss_dssp HHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGG-GCCSSSCCCCHHHHHTSGGGTTSCT
T ss_pred HHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccc-cccCCCCccCHHHhccccccccCCC
Confidence 864 268888888888874 556 89999999999999999999753 333321 1111 11 2 5
Q ss_pred c--EEEeCCCCcC--CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHh--cChHHHHHHHHH
Q 014724 306 D--VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHA--QSPEFKVYQNKV 379 (419)
Q Consensus 306 D--iv~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~--~~~~~~~~~~~v 379 (419)
| +++.|+||+| +|.|.|+++++++ ++.+.+.....++ +. +....+++..++... ....+++..+++
T Consensus 258 d~viv~~s~sK~~g~~Glr~G~~~~~~~-----~~~~~~~~~~~~~--~~-~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 329 (428)
T 1iay_A 258 DLVHIVYSLSKDMGLPGFRVGIIYSFND-----DVVNCARKMSSFG--LV-STQTQYFLAAMLSDEKFVDNFLRESAMRL 329 (428)
T ss_dssp TSEEEEEESTTTSSCGGGCEEEEEESCH-----HHHHHHHHHHTTS--CC-CHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred CcEEEEecchhhcCCCCceEEEEEeCCH-----HHHHHHHHHHhcc--cC-CHHHHHHHHHHhcChHHHHHHHHHHHHHH
Confidence 7 8899999998 6788999998543 5666665433222 12 222233333233221 111346677888
Q ss_pred HHHHHHHHHHHHhCCcEEecCCCcceeEEEEeCC
Q 014724 380 VSNCRALASRLVELGYKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 380 ~~n~~~l~~~L~~~G~~v~~~~t~~hlv~vd~~~ 413 (419)
.+++++|.+.|++.|+++..+ ...+++|+++..
T Consensus 330 ~~~~~~l~~~L~~~g~~~~~~-~~g~~~~~~~~~ 362 (428)
T 1iay_A 330 GKRHKHFTNGLEVVGIKCLKN-NAGLFCWMDLRP 362 (428)
T ss_dssp HHHHHHHHHHHHHTTCCBCCC-SSSSEEEEECGG
T ss_pred HHHHHHHHHHHHhcCCcccCC-CeeEEEEEechh
Confidence 899999999999989887642 346678999864
No 97
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.87 E-value=7.9e-20 Score=189.61 Aligned_cols=249 Identities=12% Similarity=0.080 Sum_probs=175.6
Q ss_pred hHHHHHHHHHHHHHHHHcCCCC--CCCceeEecCChHHHHHHHHHHccCCC--------CEEEEeCCCCCccccCccccc
Q 014724 144 EYIDELETLCQKRALAAFNLDE--NKWGVNVQPLSGSPANFEVYTAILKPH--------DRIMGLDLPHGGHLSHGFMTP 213 (419)
Q Consensus 144 ~~~~~lE~~~~~~la~~~g~~~--~~~~v~V~~~sGt~A~~~~~~all~pG--------D~Vl~~~~~~~g~~s~~~~~~ 213 (419)
....++|+.+++++++++|++. ++. ..+++++|++|+..++.++.++| |+|++..+.|.++.
T Consensus 135 p~~~~le~~l~~~la~~~g~~~~~~~v-~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~------- 206 (514)
T 3mad_A 135 PSTAKFEAEVVAMTAHMLGGDAAGGTV-CGTVTSGGTESLLLAMKTYRDWARATKGITAPEAVVPVSAHAAFD------- 206 (514)
T ss_dssp HHHHHHHHHHHHHHHHHTTGGGGTSCC-EEEEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCTHHH-------
T ss_pred hHHHHHHHHHHHHHHHHcCCCCccCCc-ceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccchHHH-------
Confidence 3456788888899999999984 211 12566677899999999998877 99999999887753
Q ss_pred cccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CcCChHHHHHHHHHhCCEEEEecccccc
Q 014724 214 KRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISG 291 (419)
Q Consensus 214 ~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p--~~~dl~~I~~ia~~~ga~livD~ah~~G 291 (419)
+.+...|.. ++.+++++ ++.+|+++|++++++ ++++|++++++|| ...|+++|+++|++||++||+|++|..+
T Consensus 207 -~~~~~~G~~--v~~v~~~~-~~~~d~~~Le~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~la~~~~i~livDea~~~~ 281 (514)
T 3mad_A 207 -KAAQYFGIK--LVRTPLDA-DYRADVAAMREAITP-NTVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACLGGF 281 (514)
T ss_dssp -HHHHHHTCE--EEEECBCT-TSCBCHHHHHHHCCT-TEEEEEEETTCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTTT
T ss_pred -HHHHHcCCe--eEEeeeCC-CCCCCHHHHHHHhcc-CCEEEEEeCCCCCCccccCHHHHHHHHHHhCCeEEEecccccc
Confidence 123445654 44445553 788999999999975 7899999988876 4678999999999999999999997643
Q ss_pred ccc----cCCcCCCC----CCCcEEEeCCCCcCCCC-CeeEEEEeCCCcchhhHHHHhhh---------cccCCCCCCCh
Q 014724 292 LVA----ASVVADPF----KYCDVVTTTTHKSLRGP-RGGMIFFKKDPVLGVELESAINN---------AVFPGLQGGPH 353 (419)
Q Consensus 292 l~~----~g~~~~~~----~~~Div~~S~hK~l~Gp-rgG~i~~~~~~~~~~~l~~~i~~---------~~~~~~~g~p~ 353 (419)
... .|....++ .++|++++|+||++.|+ +.|+++++++ .+...... ...+...|++.
T Consensus 282 ~~~~~~~~g~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~gs~~ 356 (514)
T 3mad_A 282 ILPWAERLGYPVPPFDFRLEGVTSVSADTHKYGYGAKGTSVILYRRP-----DLLHYQYFIAADWPGGLYFSPTFAGSRP 356 (514)
T ss_dssp THHHHHHTTCCCCCCSTTSTTCCEEEECTTTTTCCCSSCEEEEESSH-----HHHTTTCEEESSCTTCSEEESSSCSSCC
T ss_pred cchhHHhcCCCCCcccccCCCCcEEEECchhccCCCCCeEEEEEeCH-----HHhccccccccccCCCcccCCccCCCCc
Confidence 321 11100112 27899999999996554 5699888873 22221100 11122344555
Q ss_pred HHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEEecCCCcceeEEEEeC
Q 014724 354 NHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 354 ~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~~~~t~~hlv~vd~~ 412 (419)
...++++..++..+...++++..+++.++++++.+.|++. |++++.. ...+++++..
T Consensus 357 ~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~--~~~~~~~~~~ 414 (514)
T 3mad_A 357 GALSATAWAAMLSLGEEGYLDATRRILQAADRLKAGVRAIPSLKILGD--PLWVIAVASD 414 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCEESSC--CSSEEEEECS
T ss_pred hHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEeCC--CeEEEEEeCC
Confidence 5555556666666554567888999999999999999996 8888753 2446776653
No 98
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.87 E-value=1.4e-20 Score=187.72 Aligned_cols=234 Identities=12% Similarity=0.123 Sum_probs=163.9
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccc
Q 014724 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (419)
Q Consensus 142 g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g 221 (419)
+.++.+.++ .+++++++++|.+. ..+++.|||+|+++++. +++|||+|+++++.|.++. +. ......|
T Consensus 30 ~~~~~~~~~-~~~~~l~~~~~~~~----~v~~~~sgt~a~~~~~~-~~~~gd~vi~~~~~~~~~~---~~---~~~~~~g 97 (379)
T 3ke3_A 30 SKAFQEVMN-DLLSNLKTVYNAEA----AVIIPGSGTYGMEAVAR-QLTIDEDCLIIRNGWFSYR---WT---QILEKGK 97 (379)
T ss_dssp SHHHHHHHH-HHHHHHHHHHTCSE----EEEEESCHHHHHHHHHH-HHCTTCEEEEEECSHHHHH---HH---HHHHHHC
T ss_pred CHHHHHHHH-HHHHHHHHHhCCCC----EEEEcCChhHHHHHHHH-hCCCCCeEEEEeCCchhHH---HH---HHHHHhC
Confidence 455554444 67889999999873 33555688999998875 4579999999987654421 00 0112234
Q ss_pred cccEEEecccCCC-------C-CCCCHHHHHHHhhhcCCeEEEEcCCCCC--CcCC---hHHHHHHHHHhCCEEEEeccc
Q 014724 222 IYFESMPYRLDES-------T-GLVDYDMLEKTAILFRPKLIIAGASAYP--RDFD---YPRMRQIADAVGALLMMDMAH 288 (419)
Q Consensus 222 ~~~~~v~~~~~~~-------~-~~iD~d~Le~~l~~~~pklIi~~~s~~p--~~~d---l~~I~~ia~~~ga~livD~ah 288 (419)
..++++.++.+.. . +.+|++++++.+++.++++|++.+++++ ...| +++|+++|++||+++++|++|
T Consensus 98 ~~~~~~~~~~~~~g~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~ 177 (379)
T 3ke3_A 98 FAKSSTVLTAERTEDTEAPKPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIA 177 (379)
T ss_dssp CSSEEEEEECEESSCCSSCCCEECCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCceEEEeccccccccccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEecc
Confidence 3234444333210 1 2689999999996558999888765544 4667 999999999999999999998
Q ss_pred cccccccCCcCCCCC--CCcEEEeCCCCcCCCCCe-eEEEEeCCCcchhhHHHHhhhcc---c---------------CC
Q 014724 289 ISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAV---F---------------PG 347 (419)
Q Consensus 289 ~~Gl~~~g~~~~~~~--~~Div~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~~~~---~---------------~~ 347 (419)
. |.. +..+. ++|++++|+||+|.||.| |+++.++ ++.+.+.... + .+
T Consensus 178 ~-g~~-----~~~~~~~~~d~~~~s~~K~l~~~~g~g~~~~~~------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g 245 (379)
T 3ke3_A 178 S-GCV-----WLDMKELGIDVLISAPQKGWSSTPCAGLVMLSA------AAIKKVESTESNCFSLDLKQWLTIMRAYENG 245 (379)
T ss_dssp C-TTC-----CCCHHHHTCSEEEECTTTTTCSCCCEEEEEECH------HHHHHHHTCCCSCSTTCHHHHHHHHHHHHTT
T ss_pred c-CCc-----cccccccCCCEEEecchhhcCCCCceEEEEECH------HHHHhhhcCCCCceeecHHHHHHHHHhhhcc
Confidence 6 521 22222 789999999999988875 8888887 4544443210 0 01
Q ss_pred ---CCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEec
Q 014724 348 ---LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS 399 (419)
Q Consensus 348 ---~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~ 399 (419)
+.++++...++++..+++.+...+++++.++..+++++|++.|++.|+++..
T Consensus 246 ~~~~~~t~~~~~~~a~~aal~~~~~~g~~~~~~~~~~l~~~l~~~l~~~g~~~~~ 300 (379)
T 3ke3_A 246 GHAYHATMPTDSLRQFRDAILEAKEIGFDILRDAQWELGNRVRKVLTDKGIESVA 300 (379)
T ss_dssp SCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSB
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCEecC
Confidence 1246777778888888887764457888899999999999999999998875
No 99
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.87 E-value=1.2e-21 Score=191.85 Aligned_cols=271 Identities=20% Similarity=0.204 Sum_probs=168.8
Q ss_pred cccccccCC-CChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHH
Q 014724 104 SLELIASEN-FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF 182 (419)
Q Consensus 104 ~i~L~~sen-~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~ 182 (419)
.|.|..+++ ++++.+++++........ .|.......+++ +++++++|.+. .+++++|++|+.
T Consensus 5 ~i~~~~~~~~~p~~~~~~a~~~~~~~~~--------~y~~~~~~~~l~----~~la~~~g~~~-----~~~~~~gt~a~~ 67 (347)
T 1jg8_A 5 MIDLRSDTVTKPTEEMRKAMAQAEVGDD--------VYGEDPTINELE----RLAAETFGKEA-----ALFVPSGTMGNQ 67 (347)
T ss_dssp CEECSCGGGCCCCHHHHHHHHTCCCCCG--------GGTCCHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHH
T ss_pred EEEeccccCCCCCHHHHHHHhcCCCCCc--------ccCCChHHHHHH----HHHHHHhCCce-----EEEecCcHHHHH
Confidence 466766665 467899999865432110 122223334554 67888899864 377889999999
Q ss_pred HHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhc-----CCeEEEE
Q 014724 183 EVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-----RPKLIIA 257 (419)
Q Consensus 183 ~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~-----~pklIi~ 257 (419)
+++.++++|||+|++++|.|.+.+... ..+...|. +++++ .+ +++.+|+++|++.+++. ++|+|++
T Consensus 68 ~~~~~~~~~gd~Vl~~~~~~~~~~~~~-----~~~~~~g~--~~~~v-~~-~~~~~d~~~l~~~i~~~~~~~~~~~~v~~ 138 (347)
T 1jg8_A 68 VSIMAHTQRGDEVILEADSHIFWYEVG-----AMAVLSGV--MPHPV-PG-KNGAMDPDDVRKAIRPRNIHFPRTSLIAI 138 (347)
T ss_dssp HHHHHHCCTTCEEEEETTCHHHHSSTT-----HHHHHTCC--EEEEE-CE-ETTEECHHHHHHHSCCSCTTSCCEEEEEE
T ss_pred HHHHHhcCCCCEEEEcCcchhhhcccc-----chhhccCe--EEEEe-cC-CCCccCHHHHHHHhccccccccCceEEEE
Confidence 999999999999999998875533111 01123454 44444 22 35678999999998742 5899999
Q ss_pred cCCCCCC---cC---ChHHHHHHHHHhCCEEEEecccccccc-ccCCcCCCC-CCCcEEEeCCCCcCCCCCeeEEEEeCC
Q 014724 258 GASAYPR---DF---DYPRMRQIADAVGALLMMDMAHISGLV-AASVVADPF-KYCDVVTTTTHKSLRGPRGGMIFFKKD 329 (419)
Q Consensus 258 ~~s~~p~---~~---dl~~I~~ia~~~ga~livD~ah~~Gl~-~~g~~~~~~-~~~Div~~S~hK~l~GprgG~i~~~~~ 329 (419)
++++||+ .. ++++|.++|++||++|++|++|..+.. ..+....++ .++|.++.|+||+|++|.|++++.++
T Consensus 139 ~~~~npt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~~G~~~~~~~- 217 (347)
T 1jg8_A 139 ENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYADSVMFCLSKGLCAPVGSVVVGDR- 217 (347)
T ss_dssp ESSBTTTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHTCSEEEEESSSTTCCSSCEEEEECH-
T ss_pred eccccccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhcccccEEEEecccccCCCceEEEEcCH-
Confidence 9888765 23 467899999999999999999854321 112111111 16788888999999877766676665
Q ss_pred CcchhhHHHHhhhcccCCCCCCCh-HHHHHHH-HHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeE
Q 014724 330 PVLGVELESAINNAVFPGLQGGPH-NHTIGGL-AVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLV 407 (419)
Q Consensus 330 ~~~~~~l~~~i~~~~~~~~~g~p~-~~~iaal-a~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv 407 (419)
++.+++....... .++.. ....+++ ..+++... .. .++..++++++.+.|++.|+++.......+++
T Consensus 218 -----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-~~----~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~ 286 (347)
T 1jg8_A 218 -----DFIERARKARKML-GGGMRQAGVLAAAGIIALTKMV-DR----LKEDHENARFLALKLKEIGYSVNPEDVKTNMV 286 (347)
T ss_dssp -----HHHHHHHHHHHHH-TCCCSSTHHHHHHHHHHHHHSS-TT----HHHHHHHHHHHHHHHHHHTCBCCGGGCCSSEE
T ss_pred -----HHHHHHHHHHHHc-CCchhHHHHHHHHHHHHHHHHH-HH----HHHHHHHHHHHHHHHHhcCceeccCCCcceEE
Confidence 5555443211111 01111 1111111 22444432 12 23344567888999988788753222356778
Q ss_pred EEEeC
Q 014724 408 LVDLR 412 (419)
Q Consensus 408 ~vd~~ 412 (419)
|+++.
T Consensus 287 ~~~~~ 291 (347)
T 1jg8_A 287 ILRTD 291 (347)
T ss_dssp EEECT
T ss_pred EEEcc
Confidence 99885
No 100
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.87 E-value=4.2e-21 Score=194.24 Aligned_cols=307 Identities=14% Similarity=0.163 Sum_probs=182.8
Q ss_pred hhccccccChh-HHHHHHHHHHHh------hhcccccccCCC--ChHHHHHHHhhhhhccCC-CCCCCCCCCCchhHHHH
Q 014724 79 VDYSLGEADPE-VCEIITKEKERQ------FKSLELIASENF--TSRAVMEAVGSCLTNKYS-EGLPGKRYYGGNEYIDE 148 (419)
Q Consensus 79 ~~~~l~~~~~~-~~~~~~~e~~r~------~~~i~L~~sen~--~~~~V~eal~~~l~~~y~-~g~p~~r~~~g~~~~~~ 148 (419)
.+.++..+++. .++-+.+..... ++.|+|..++.. +++.|++++.+.+..... .++. . |+......+
T Consensus 26 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~--~-y~~~~g~~~ 102 (432)
T 3ei9_A 26 RNSNMSKLQAGYLFPEIARRRSAHLLKYPDAQVISLGIGDTTEPIPEVITSAMAKKAHELSTIEGYS--G-YGAEQGAKP 102 (432)
T ss_dssp CCHHHHHCCSSCHHHHHHHHHHHHHHHCTTCCCEECSSCCCCSCCCHHHHHHHHHHHHHTTSTTTCC--C-CCCTTCCHH
T ss_pred cChHHHhCCCCccHHHHHHHHHhhhhcCCCCCeEEccCCCCCCCCCHHHHHHHHHHHhcccccCCcc--C-CCCCCCCHH
Confidence 34556677764 444332221111 245888877632 689999999888753111 1111 1 211112246
Q ss_pred HHHHHHHHHHHHcCCCCCCCceeEecCChH-HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccc------
Q 014724 149 LETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS------ 221 (419)
Q Consensus 149 lE~~~~~~la~~~g~~~~~~~v~V~~~sGt-~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g------ 221 (419)
+++.+.+++.+.++++++ +|++++|+ +++.. +.++++|||+|++.+|.|.++... +...|
T Consensus 103 l~~~ia~~~~~~~~~~~~----~i~~t~G~~~al~~-l~~l~~~gd~Vl~~~p~y~~~~~~--------~~~~g~~~~~~ 169 (432)
T 3ei9_A 103 LRAAIAKTFYGGLGIGDD----DVFVSDGAKCDISR-LQVMFGSNVTIAVQDPSYPAYVDS--------SVIMGQTGQFN 169 (432)
T ss_dssp HHHHHHHHHHTTTTCCGG----GEEEESCHHHHHHH-HHHHHCTTCCEEEEESCCTHHHHH--------HHHHTCSCCEE
T ss_pred HHHHHHHHHHccCCCCcc----eEEECCChHHHHHH-HHHHcCCCCEEEEeCCCCHHHHHH--------HHHcCCccccc
Confidence 766666666554566653 36666665 56665 688899999999999998776421 11122
Q ss_pred ------cccEEEecccCCC-CCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cC---ChHHHHHHHHHhCCEEEEecccc
Q 014724 222 ------IYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHI 289 (419)
Q Consensus 222 ------~~~~~v~~~~~~~-~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~---dl~~I~~ia~~~ga~livD~ah~ 289 (419)
..+..++ ++++ +...|+++ ..++|+|++++|+||+ .. ++++|+++|++||++||+|++|.
T Consensus 170 ~~~~~~~~~~~~~--~~~~~~~~~~l~~------~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~ 241 (432)
T 3ei9_A 170 TDVQKYGNIEYMR--CTPENGFFPDLST------VGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYA 241 (432)
T ss_dssp TTTTEETTCEEEE--CCGGGTTSCCGGG------CCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTG
T ss_pred ccccccCceEEec--cCcccCCcCChhh------CCCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchH
Confidence 1233333 4322 33555432 2478999998999985 33 46788888999999999999975
Q ss_pred ccccccCCcCCC--CC---CCcEEEeCCCCcC--CCCCeeEEEEeCCCc--chhhHHHHhhhcccCCCCCCChHHHHHHH
Q 014724 290 SGLVAASVVADP--FK---YCDVVTTTTHKSL--RGPRGGMIFFKKDPV--LGVELESAINNAVFPGLQGGPHNHTIGGL 360 (419)
Q Consensus 290 ~Gl~~~g~~~~~--~~---~~Div~~S~hK~l--~GprgG~i~~~~~~~--~~~~l~~~i~~~~~~~~~g~p~~~~iaal 360 (419)
. ++..+..... ++ ..+++++|+||+| +|+|.|+++++++.+ ....+.+.+........ ++++....++.
T Consensus 242 ~-~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~ 319 (432)
T 3ei9_A 242 M-YMSDDNPRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTVIPKKLLYSDGFPVAKDFNRIICTCF-NGASNISQAGA 319 (432)
T ss_dssp G-GCCSSCCSSGGGSTTGGGTEEEEEESHHHHCTTTTCCEEEECCTTCBCTTSCBHHHHHHHHHHHSC-CCSCHHHHHHH
T ss_pred h-hccCCCCCChhhcCCCCCeEEEEecchhccCCcccceEEEEEChHHhhcchHHHHHHHHHHhcccc-CCCCHHHHHHH
Confidence 3 3333221111 11 3458999999987 788899999987521 00011333332211111 22333333333
Q ss_pred HHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeEEEEeC
Q 014724 361 AVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 361 a~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~vd~~ 412 (419)
..++.....+..++..+++.++++++.+.|++.|+++..+ ..++++|+++.
T Consensus 320 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~~~~ 370 (432)
T 3ei9_A 320 LACLTPEGLEAMHKVIGFYKENTNIIIDTFTSLGYDVYGG-KNAPYVWVHFP 370 (432)
T ss_dssp HHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEC-SSSSEEEEECT
T ss_pred HHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHCCceecCC-CcceEEEEECC
Confidence 3343221113457778889999999999999999988753 45677999986
No 101
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.87 E-value=1.7e-21 Score=191.72 Aligned_cols=272 Identities=12% Similarity=0.052 Sum_probs=174.9
Q ss_pred HhhhcccccccCCCC--hHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCCh
Q 014724 100 RQFKSLELIASENFT--SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG 177 (419)
Q Consensus 100 r~~~~i~L~~sen~~--~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sG 177 (419)
++...+.+..++|+. +|.|++++.+.+... . |+..+...+++ +++++++|.+. .+++++|
T Consensus 11 ~~~~~~~~~~~~~~~g~~p~v~~ai~~~~~~~---~------~~~~~~~~~l~----~~la~~~~~~~-----~i~~~~g 72 (359)
T 3pj0_A 11 QKTPYKLGGNGPRNVGVLTEALQNIDDNLESD---I------YGNGAVIEDFE----TKIAKILGKQS-----AVFFPSG 72 (359)
T ss_dssp HTCSEESSSSSCCBHHHHHHHTTTSCTTCBCC---B------TTBSHHHHHHH----HHHHHHHTCSE-----EEEESCH
T ss_pred HhcchhhcCCCccccCCCHHHHHHHHhhcccC---c------ccCCHHHHHHH----HHHHHHhCCCc-----EEEeCCH
Confidence 456668888899886 899999987744211 1 22223334444 67888899875 2667899
Q ss_pred HHHHHHHHHHccCCCCE--EEEeCCCCCccccCccccccccc-cccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeE
Q 014724 178 SPANFEVYTAILKPHDR--IMGLDLPHGGHLSHGFMTPKRRV-SGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKL 254 (419)
Q Consensus 178 t~A~~~~~~all~pGD~--Vl~~~~~~~g~~s~~~~~~~~~i-~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pkl 254 (419)
++|+..++.+++++||+ |++..+.|....... .+ ...|. ++++++. +++.+|+++|++. ..++|+
T Consensus 73 ~~a~~~a~~~~~~~g~~~vvi~~~~~~~~~~~~~------~~~~~~g~--~~~~v~~--~~~~~d~~~l~~~--~~~~~~ 140 (359)
T 3pj0_A 73 TMAQQIALRIWADRKENRRVAYHPLSHLEIHEQD------GLKELQQI--TPLLLGT--ANQLLTIDDIKSL--REPVSS 140 (359)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEECTTCHHHHSSTT------HHHHHHCC--EEEECSC--TTSCCCHHHHHTC--SSCCSE
T ss_pred HHHHHHHHHHHHhcCCCcEEEEeccceeeehhcc------hHHHhcCc--eEEecCC--cCCCcCHHHHHhc--cCCceE
Confidence 99999999999999997 444433332221100 11 12343 5555554 3678999999988 358999
Q ss_pred EEEcCCCCCC---cCC---hHHHHHHHHHhCCEEEEecccccccc-ccCCcCCCC-CCCcEEEeCCCCcCCCCCeeEEEE
Q 014724 255 IIAGASAYPR---DFD---YPRMRQIADAVGALLMMDMAHISGLV-AASVVADPF-KYCDVVTTTTHKSLRGPRGGMIFF 326 (419)
Q Consensus 255 Ii~~~s~~p~---~~d---l~~I~~ia~~~ga~livD~ah~~Gl~-~~g~~~~~~-~~~Div~~S~hK~l~GprgG~i~~ 326 (419)
|++++|+||+ ..+ +++|.++|++||++||+|++|..+.. ..+....++ .+.|+++.|+||+|.+|.||+++.
T Consensus 141 v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~gg~~~~ 220 (359)
T 3pj0_A 141 VLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSAEEICALFDSVYVSFYKGIGGIAGAILAG 220 (359)
T ss_dssp EEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCHHHHHTTCSEEEEESSSTTCCSSCEEEEE
T ss_pred EEEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCCHHHhhccCCEEEEeccccCCCcceEEEEC
Confidence 9998887653 345 45569999999999999999765432 111111111 267999999999998887788877
Q ss_pred eCCCcchhhHHHHhhhc--ccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEEecCCCc
Q 014724 327 KKDPVLGVELESAINNA--VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSD 403 (419)
Q Consensus 327 ~~~~~~~~~l~~~i~~~--~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~~~~t~ 403 (419)
++ ++.+.+... .+.+..........+++ .+++... +..+++.++++++.+.|++. |+++......
T Consensus 221 ~~------~l~~~~~~~~~~~~~~~~~~~~~~~a~~-~~l~~~~-----~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~ 288 (359)
T 3pj0_A 221 ND------DFVQEAKIWKRRYGGDLISLYPYILSAD-YYFEKRI-----GKMAEYFEAAKGLAERFNSCSGVKTVPEVPV 288 (359)
T ss_dssp CH------HHHHHHHHHHHHTTCCCSCCHHHHHHHH-HHHHHHG-----GGHHHHHHHHHHHHHHHHTSTTEEEESSSCS
T ss_pred CH------HHHHHHHHHHHHhCCCcchhHHHHHHHH-HHHHHHH-----HHhHHHHHHHHHHHHHHhhCCCceeeccCCc
Confidence 76 676666532 11111111122222222 2444322 33455677889999999997 9988533456
Q ss_pred ceeEEEEeCC
Q 014724 404 NHLVLVDLRP 413 (419)
Q Consensus 404 ~hlv~vd~~~ 413 (419)
++++|+++..
T Consensus 289 ~~~~~~~~~~ 298 (359)
T 3pj0_A 289 SNMFHVYFEN 298 (359)
T ss_dssp SSEEEEEESS
T ss_pred ceEEEEEecC
Confidence 7889988864
No 102
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.87 E-value=1.5e-20 Score=186.06 Aligned_cols=271 Identities=13% Similarity=0.033 Sum_probs=180.5
Q ss_pred hcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCC--CCCCCceeEecCChH
Q 014724 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPLSGS 178 (419)
Q Consensus 103 ~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~--~~~~~~v~V~~~sGt 178 (419)
+.|+|..+++. .|+.|++++.+.+.. ..+|+.. .|. .++++.+.+++.+.+|+ +++ ..+++++|+
T Consensus 24 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~--~~~y~~~---~g~---~~lr~~la~~l~~~~g~~~~~~---~i~~t~g~~ 92 (376)
T 3ezs_A 24 RGLDLGIGEPQFETPKFIQDALKNHTHS--LNIYPKS---AFE---ESLRAAQRGFFKRRFKIELKEN---ELISTLGSR 92 (376)
T ss_dssp CCCBCSSCCCCSCCCHHHHHHHHTTGGG--GGSCCCT---TCC---HHHHHHHHHHHHHHHSCCCCGG---GEEEESSSH
T ss_pred CEEEeCCCCCCCCCCHHHHHHHHHhhhh--cCCCCCC---CCC---HHHHHHHHHHHHHHhCCCCCHH---HEEECcCcH
Confidence 45888877754 579999999887632 1234431 122 36676777888888898 443 224555668
Q ss_pred HHHHHHHHHccCC--CCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEE
Q 014724 179 PANFEVYTAILKP--HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLII 256 (419)
Q Consensus 179 ~A~~~~~~all~p--GD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi 256 (419)
+|+..++.++++| ||+|++..|.|.++.. .+...|. +++.++++++ +.+++ ++++.+.+ ++++|+
T Consensus 93 ~al~~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~--~~~~~~~~~~-~~~~~-~l~~~~~~-~~~~v~ 159 (376)
T 3ezs_A 93 EVLFNFPSFVLFDYQNPTIAYPNPFYQIYEG--------AAKFIKA--KSLLMPLTKE-NDFTP-SLNEKELQ-EVDLVI 159 (376)
T ss_dssp HHHHHHHHHHTTTCSSCEEEEEESCCTHHHH--------HHHHTTC--EEEEEECCGG-GTSCC-CCCHHHHH-HCSEEE
T ss_pred HHHHHHHHHHcCCCCCCEEEEecCCcHhHHH--------HHHHcCC--EEEEcccCCC-CCcch-hHHhhhcc-CCCEEE
Confidence 8999999999999 9999999998876532 2234555 4444444432 23444 66666654 789999
Q ss_pred EcCCCCCC--cCC---hHHHHHHHHHhCCEEEEeccccccccccCCcCCC----------CCCCcEEEeCCCCcC--CCC
Q 014724 257 AGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP----------FKYCDVVTTTTHKSL--RGP 319 (419)
Q Consensus 257 ~~~s~~p~--~~d---l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~----------~~~~Div~~S~hK~l--~Gp 319 (419)
+++|+||+ ..+ +++|+++|++||++||+|++|. ++...+..... -.+.++++.|+||++ +|.
T Consensus 160 ~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~ 238 (376)
T 3ezs_A 160 LNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYS-EIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGL 238 (376)
T ss_dssp ECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTT-TCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGGG
T ss_pred EcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccch-hhccCCCCCCHHHccccccccccCcEEEEecchhccCCccc
Confidence 99899885 333 6788888999999999999975 34433311111 114568999999998 677
Q ss_pred CeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEec
Q 014724 320 RGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS 399 (419)
Q Consensus 320 rgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~ 399 (419)
|.|+++.++ ++.+.+......... +++....+++..++.. .+.+++..+++.++++++.+.|+ |+. .
T Consensus 239 r~G~~~~~~------~~~~~~~~~~~~~~~-~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~--~~~-~- 305 (376)
T 3ezs_A 239 RSGFIAGDS------RLLEKYKAFRAYLGY-TSANAIQKASEAAWLD--DRHAEFFRNIYANNLKLARKIFK--NTL-I- 305 (376)
T ss_dssp CCEEEEECH------HHHHHHHHHHTTTCC-CCCHHHHHHHHHHHHC--SHHHHHHHHHHHHHHHHHHHHST--TCC-C-
T ss_pred eeEEEeeCH------HHHHHHHHHHhhhcC-CCChHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHhc--CCC-C-
Confidence 889999877 677766554332222 2333344444445543 24467788888999999999987 665 2
Q ss_pred CCCcceeEEEEeC
Q 014724 400 GGSDNHLVLVDLR 412 (419)
Q Consensus 400 ~~t~~hlv~vd~~ 412 (419)
....+++|+++.
T Consensus 306 -~~~~~~~~~~~~ 317 (376)
T 3ezs_A 306 -YPYSFYVYLPVQ 317 (376)
T ss_dssp -CSBSSEEEEECS
T ss_pred -CCcceEEEEECC
Confidence 245677888875
No 103
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.86 E-value=1.9e-20 Score=187.29 Aligned_cols=272 Identities=18% Similarity=0.191 Sum_probs=180.9
Q ss_pred ccccccCC--C-ChHHHHHHHhhhhhccCCCCCCCCC-CCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHH
Q 014724 105 LELIASEN--F-TSRAVMEAVGSCLTNKYSEGLPGKR-YYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 180 (419)
Q Consensus 105 i~L~~sen--~-~~~~V~eal~~~l~~~y~~g~p~~r-~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A 180 (419)
+++..+++ + .+|.|++++.+.+.+ +..+..+.+ .|+..+...+ +++.+++++|.+. .|++++|+.+
T Consensus 49 i~~~~~~~~~~~~~p~v~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~----l~~~la~~~~~~~-----~i~~~sG~~a 118 (401)
T 2bwn_A 49 TVWCGNDYLGMGQHPVVLAAMHEALEA-VGAGSGGTRNISGTTAYHRR----LEAEIAGLHQKEA-----ALVFSSAYNA 118 (401)
T ss_dssp EECSCSCTTSGGGCHHHHHHHHHHHHH-HCSCCCSBTTTBCCBHHHHH----HHHHHHHHTTCSE-----EEEESCHHHH
T ss_pred EEeeCCCcccCCCCHHHHHHHHHHHHH-cCCCCCCcCcccCChHHHHH----HHHHHHHHhCCCc-----EEEECCcHHH
Confidence 44544443 1 367899999888754 211111111 1222233334 4477888998742 4778999888
Q ss_pred HHHHHHHcc--CCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhh---cCCeEE
Q 014724 181 NFEVYTAIL--KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---FRPKLI 255 (419)
Q Consensus 181 ~~~~~~all--~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~---~~pklI 255 (419)
+..++.++. +|||+|++..+.|+++.. .+...|. +++.++.+ |++++++.+++ .++++|
T Consensus 119 ~~~~~~~l~~~~~gd~Vl~~~~~~~~~~~--------~~~~~g~--~~~~v~~~------d~~~le~~l~~~~~~~~~~v 182 (401)
T 2bwn_A 119 NDATLSTLRVLFPGLIIYSDSLNHASMIE--------GIKRNAG--PKRIFRHN------DVAHLRELIAADDPAAPKLI 182 (401)
T ss_dssp HHHHHHHHHHHSTTCEEEEETTCCHHHHH--------HHHHSCC--CEEEECTT------CHHHHHHHHHHSCTTSCEEE
T ss_pred HHHHHHHHhcCCCCCEEEECchhhHHHHH--------HHHHcCC--eEEEEcCC------CHHHHHHHHHhhccCCceEE
Confidence 888877653 699999999998876542 2234455 34444332 78999998863 368899
Q ss_pred EEcCCCCCC--cCChHHHHHHHHHhCCEEEEecccccccccc-CC--cC-CCC-CCCcEEEeCCCCcCCCCCeeEEEEeC
Q 014724 256 IAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAA-SV--VA-DPF-KYCDVVTTTTHKSLRGPRGGMIFFKK 328 (419)
Q Consensus 256 i~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~-g~--~~-~~~-~~~Div~~S~hK~l~GprgG~i~~~~ 328 (419)
++++++||+ ..|+++|.++|++||+++|+|++|..|..+. +. .. ..+ +..|++++|++|+|++ .||+++.++
T Consensus 183 ~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~-~GG~~~~~~ 261 (401)
T 2bwn_A 183 AFESVYSMDGDFGPIKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGV-FGGYIAASA 261 (401)
T ss_dssp EEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCS-CCEEEEECH
T ss_pred EEecCcCCCCCcCCHHHHHHHHHHcCCEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhccC-CCCEEecCH
Confidence 999888874 6799999999999999999999998665421 11 00 011 1358999999999854 569998876
Q ss_pred CCcchhhHHHHhhhcc--cCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCccee
Q 014724 329 DPVLGVELESAINNAV--FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHL 406 (419)
Q Consensus 329 ~~~~~~~l~~~i~~~~--~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hl 406 (419)
++.+.+.... +....+++. ..++++..+++.+...++++..+++.++++++.+.|++.|+++... +.++
T Consensus 262 ------~~~~~l~~~~~~~~~~~~~~~-~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~--~~~~ 332 (401)
T 2bwn_A 262 ------RMVDAVRSYAPGFIFSTSLPP-AIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKALGMPIIDH--GSHI 332 (401)
T ss_dssp ------HHHHHHHHHCHHHHTSBCCCH-HHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHTCCBCCC--SSSC
T ss_pred ------HHHHHHHHhCcCceecCCCCH-HHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHCCCcccCC--CCCe
Confidence 5655554311 111122333 4455556677776544457888899999999999999888887642 3468
Q ss_pred EEEEeC
Q 014724 407 VLVDLR 412 (419)
Q Consensus 407 v~vd~~ 412 (419)
+++++.
T Consensus 333 ~~~~~~ 338 (401)
T 2bwn_A 333 VPVVIG 338 (401)
T ss_dssp EEEECC
T ss_pred EEEEeC
Confidence 898875
No 104
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.86 E-value=6.7e-21 Score=191.04 Aligned_cols=253 Identities=19% Similarity=0.166 Sum_probs=172.5
Q ss_pred hcccccccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHH
Q 014724 103 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF 182 (419)
Q Consensus 103 ~~i~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~ 182 (419)
..|+|..+++..++.|++++.+.+... .| ..+ ....+++ +.+++++|.+. .+++++|++|+.
T Consensus 31 ~~id~~~~~~~~~~~v~~a~~~~~~~~---~y-----~~~-~~~~~l~----~~la~~~~~~~-----~v~~~~Gt~a~~ 92 (399)
T 2oga_A 31 PFLDLKAAYEELRAETDAAIARVLDSG---RY-----LLG-PELEGFE----AEFAAYCETDH-----AVGVNSGMDALQ 92 (399)
T ss_dssp CSCCHHHHHHHTHHHHHHHHHHHHHHT---CC-----SSS-HHHHHHH----HHHHHHTTSSE-----EEEESCHHHHHH
T ss_pred cccccCcCCCCCCHHHHHHHHHHHhcC---CC-----CCc-hhHHHHH----HHHHHHHCCCe-----EEEecCHHHHHH
Confidence 456777777666799999998887531 12 112 3234444 67888998863 377889999999
Q ss_pred HHHHHc-cCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCC
Q 014724 183 EVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 261 (419)
Q Consensus 183 ~~~~al-l~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~ 261 (419)
.++.++ ++|||+|+++++.|.++.. .+...|. +++.++++++++.+|+++|++.+++ ++++|+++++
T Consensus 93 ~~l~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~--~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~n~- 160 (399)
T 2oga_A 93 LALRGLGIGPGDEVIVPSHTYIASWL--------AVSATGA--TPVPVEPHEDHPTLDPLLVEKAITP-RTRALLPVHL- 160 (399)
T ss_dssp HHHHHTTCCTTCEEEEESSSCTHHHH--------HHHHTTC--EEEEECBCSSSSSBCHHHHHHHCCT-TEEEECCBCG-
T ss_pred HHHHHhCCCCcCEEEECCCccHHHHH--------HHHHCCC--EEEEEecCCCCCCcCHHHHHHhcCC-CCeEEEEeCC-
Confidence 999999 9999999999998876532 2334555 4555556544678999999999975 7888886543
Q ss_pred CCCcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC-CCcEEEeCC--CCcCCCC-CeeEEEEeCCCcchhhHH
Q 014724 262 YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTT--HKSLRGP-RGGMIFFKKDPVLGVELE 337 (419)
Q Consensus 262 ~p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~-~~Div~~S~--hK~l~Gp-rgG~i~~~~~~~~~~~l~ 337 (419)
++...|+++|.++|+++|++||+|++|..|....+. ++. ..|++++|+ +|+|+++ ++|+++++++ ++.
T Consensus 161 tG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~---~~~~~~di~~~S~~~sK~~~~~G~~g~~~~~~~-----~~~ 232 (399)
T 2oga_A 161 YGHPADMDALRELADRHGLHIVEDAAQAHGARYRGR---RIGAGSSVAAFSFYPGKNLGCFGDGGAVVTGDP-----ELA 232 (399)
T ss_dssp GGCCCCHHHHHHHHHHHTCEECEECTTCTTCEETTE---ETTCTTCEEEEECCTTSSSCCSSCCEEEEESCH-----HHH
T ss_pred cCCccCHHHHHHHHHHcCCEEEEECcccccCccCCe---ecccccCEEEEeCCCCccCCcCCceEEEEeCCH-----HHH
Confidence 455679999999999999999999999766443321 122 369999999 4998553 8899998743 565
Q ss_pred HHhhhcccCCC--------CC---CChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEEe
Q 014724 338 SAINNAVFPGL--------QG---GPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLV 398 (419)
Q Consensus 338 ~~i~~~~~~~~--------~g---~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~ 398 (419)
+.+......+. .+ ..+....++...+++ .++.+.++..++++++.+.|.+. |+++.
T Consensus 233 ~~l~~~~~~g~~~~~~~~~~g~~~~~~~~~~a~~~~~l~-----~~~~~~~~~~~~~~~l~~~L~~~~g~~~~ 300 (399)
T 2oga_A 233 ERLRMLRNYGSRQKYSHETKGTNSRLDEMQAAVLRIRLA-----HLDSWNGRRSALAAEYLSGLAGLPGIGLP 300 (399)
T ss_dssp HHHHHHHBTTCSSTTCCCSCCCBCCCCHHHHHHHHHHHH-----THHHHHHHHHHHHHHHHHHTTTCTTCBCC
T ss_pred HHHHHHHhcCccccccccccccCCCcCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHhccCCCcccc
Confidence 55543222110 01 122222222222332 24456777788899999999886 87764
No 105
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.86 E-value=7.7e-21 Score=191.35 Aligned_cols=301 Identities=11% Similarity=0.130 Sum_probs=185.3
Q ss_pred ccccChhHHHHHHHHHHHh-----hhcccccccC------C-CChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHH
Q 014724 83 LGEADPEVCEIITKEKERQ-----FKSLELIASE------N-FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELE 150 (419)
Q Consensus 83 l~~~~~~~~~~~~~e~~r~-----~~~i~L~~se------n-~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE 150 (419)
....++.++.++++.+... .+.|+|..++ + .+++.|.+++.+..... ..+|+. ..|. .+++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~---~~g~---~~lr 86 (418)
T 3rq1_A 14 GKKLKDVIFVTAGQAQADAKENGRENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSDSE-HVGYAP---IAGI---PDFL 86 (418)
T ss_dssp TCCCCCHHHHHHHHHHHHHHHHCGGGCEECCSSCCBCTTSCBCCCHHHHHHHHTCCHHH-HHSCCC---TTCC---HHHH
T ss_pred CCCCCchHHHHHHHHHhhhhhhcCCCeEECCCCcccCCCCCccccHHHHHHHHHhcccc-cCCCCC---CCCh---HHHH
Confidence 4456666777776544433 2458888773 3 36889999987654321 113332 1232 2566
Q ss_pred HHHHHHHHHHcCCCCCCCceeEecCC-hHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEec
Q 014724 151 TLCQKRALAAFNLDENKWGVNVQPLS-GSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPY 229 (419)
Q Consensus 151 ~~~~~~la~~~g~~~~~~~v~V~~~s-Gt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~ 229 (419)
+.+.+++....+.+.. .+|++++ |++|+..++.++++|||+|++++|.|.++.. .+...|. +++.+
T Consensus 87 ~~ia~~~~~~~~~~~~---~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~--------~~~~~g~--~~~~v 153 (418)
T 3rq1_A 87 CAAEKECFGNFRPEGH---IRSIATAGGTGGIHHLIHNYTEPGDEVLTADWYWGAYRV--------ICSDTGR--TLVTY 153 (418)
T ss_dssp HHHHHHHHGGGCCSSE---EEEEEESHHHHHHHHHHHHHSCTTCEEEEESSCCTHHHH--------HHHHTTC--EEEEE
T ss_pred HHHHHHHhcccCcccc---ccEEECCchHHHHHHHHHHhcCCCCEEEECCCCchhHHH--------HHHHcCC--EEEEE
Confidence 5566666665554421 2355555 5789999999999999999999998876542 2334565 45555
Q ss_pred ccCCCCCCCCHHHHHHHhhhc---CCe-EEEEcCC-CCCC--cCC---hHHHHHHHH------HhCCEEEEecccccccc
Q 014724 230 RLDESTGLVDYDMLEKTAILF---RPK-LIIAGAS-AYPR--DFD---YPRMRQIAD------AVGALLMMDMAHISGLV 293 (419)
Q Consensus 230 ~~~~~~~~iD~d~Le~~l~~~---~pk-lIi~~~s-~~p~--~~d---l~~I~~ia~------~~ga~livD~ah~~Gl~ 293 (419)
+++++++.+|+++|++.+++. +++ +|++++| +||+ ..+ +++|+++|+ +||++||+|++| .++.
T Consensus 154 ~~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y-~~~~ 232 (418)
T 3rq1_A 154 SLFDEHNNFNHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAY-LDYS 232 (418)
T ss_dssp CSBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTT-GGGS
T ss_pred eeeCCCCCcCHHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccc-cccc
Confidence 554445789999999998752 566 7888888 8885 445 455666666 899999999996 4555
Q ss_pred ccCCcC----CCCC--CCc---EEEeCCCCcC--CCCCeeEEEE---eCCCcchhhHHHHhhhcccC---CCCCCChHHH
Q 014724 294 AASVVA----DPFK--YCD---VVTTTTHKSL--RGPRGGMIFF---KKDPVLGVELESAINNAVFP---GLQGGPHNHT 356 (419)
Q Consensus 294 ~~g~~~----~~~~--~~D---iv~~S~hK~l--~GprgG~i~~---~~~~~~~~~l~~~i~~~~~~---~~~g~p~~~~ 356 (419)
+.+... ..++ ..| ++++|+||++ +|+|.|++++ ++ ++.+.+...... +...+++...
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (418)
T 3rq1_A 233 GEKDEVRAFFNKFSHLPKEILTCVCYSLSKGFTMYGQRVGAMIGISDDE------EIADEFFEVNKSTSRATWSNICRPA 306 (418)
T ss_dssp SCHHHHHGGGGGGTTCCTTEEEEEEEESTTTTTCCSSCCEEEEEEESSH------HHHHHHHHHHHHHHHHHTSSCCHHH
T ss_pred CChHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCcCCcceEEEEEeCCH------HHHHHHHHHHHHHHhhccCCCchHH
Confidence 432110 1111 123 7889999987 6889999988 54 566555432110 0011122222
Q ss_pred HHHHHHHHHHh-----cChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeEEEEe
Q 014724 357 IGGLAVCLKHA-----QSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDL 411 (419)
Q Consensus 357 iaala~al~~~-----~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~vd~ 411 (419)
..++..++... ...+.+++.+++.++++++.+.|++.|+++..+ ..+.++|+++
T Consensus 307 ~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~~~ 365 (418)
T 3rq1_A 307 MRTMANIVADPAKFKEYEAERNCYYQLIRDRADIFKQEAAQVGLPMLPY-RGGFFITIPT 365 (418)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCC-CSSSEEEEEC
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC-CceEEEEcCC
Confidence 33323233211 001223556778888899999999889887653 3345677776
No 106
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.86 E-value=5.4e-20 Score=186.07 Aligned_cols=245 Identities=13% Similarity=0.089 Sum_probs=163.7
Q ss_pred HHHHHHHHHHHHHcCCCCCC------CceeEecCCh-HHHHHHHHHHccCCCCEEEEeCCCCCccccCcccccccccccc
Q 014724 148 ELETLCQKRALAAFNLDENK------WGVNVQPLSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGT 220 (419)
Q Consensus 148 ~lE~~~~~~la~~~g~~~~~------~~v~V~~~sG-t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~ 220 (419)
++.+.+.+++++.+|.+..+ . .+|++++| ++|+..++.++++|||+|++.+|.|.++.. .+...
T Consensus 82 ~lr~~ia~~l~~~~g~~~~~~~~~~~~-~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~ 152 (425)
T 2r2n_A 82 ELLSWLKQLQIKLHNPPTIHYPPSQGQ-MDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQ--------SLHPL 152 (425)
T ss_dssp HHHHHHHHHHHHHHCCTTTTSCGGGTC-EEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHH--------HHGGG
T ss_pred HHHHHHHHHHHHhcCCCCccccccCCc-CcEEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHH--------HHHHc
Confidence 56666778888888987521 1 13556655 679999999999999999999998866532 23345
Q ss_pred ccccEEEecccCCCCCCCCHHHHHHHhhh-----------cCCeEEEE-cCCCCCC--cCC---hHHHHHHHHHhCCEEE
Q 014724 221 SIYFESMPYRLDESTGLVDYDMLEKTAIL-----------FRPKLIIA-GASAYPR--DFD---YPRMRQIADAVGALLM 283 (419)
Q Consensus 221 g~~~~~v~~~~~~~~~~iD~d~Le~~l~~-----------~~pklIi~-~~s~~p~--~~d---l~~I~~ia~~~ga~li 283 (419)
|. +++++++++ + .+|+++|++.+++ .++|+|++ .+++||+ ..+ +++|.++|++||++||
T Consensus 153 g~--~~~~v~~~~-~-~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li 228 (425)
T 2r2n_A 153 GC--NIINVASDE-S-GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLII 228 (425)
T ss_dssp TC--EEEEECEET-T-EECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEE
T ss_pred CC--EEEEeCcCC-C-CCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEE
Confidence 55 455555543 2 4899999999863 35788876 5778874 444 4599999999999999
Q ss_pred EeccccccccccCCcCCCC---C--CCcEEEeCCCCcC-CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHH
Q 014724 284 MDMAHISGLVAASVVADPF---K--YCDVVTTTTHKSL-RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTI 357 (419)
Q Consensus 284 vD~ah~~Gl~~~g~~~~~~---~--~~Div~~S~hK~l-~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~i 357 (419)
+|++|. ++.+.+....++ + +.+++++|+||+| +|+|.|++++++ ++.+.+......... +++....
T Consensus 229 ~De~~~-~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~~GlRiG~~~~~~------~l~~~l~~~~~~~~~-~~~~~~q 300 (425)
T 2r2n_A 229 EDDPYY-FLQFNKFRVPTFLSMDVDGRVIRADSFSKIISSGLRIGFLTGPK------PLIERVILHIQVSTL-HPSTFNQ 300 (425)
T ss_dssp EECTTG-GGBSSSSCCCCTGGGCTTSCEEEEEESTTTTCSTTCCEEEEEEH------HHHHHHHHHHHTTTC-SSCHHHH
T ss_pred EECCcc-cccCCCCCCCCccccCCCCCEEEEccchhhccCccceEEEecCH------HHHHHHHHHHHHhcC-CCCHHHH
Confidence 999964 444443211112 2 3458899999998 577889999987 666666543222222 2333334
Q ss_pred HHHHHHHHHhcC----hHHHHHHHHHHHHHHHHHHHHHhC--CcEEecCCCcceeEEEEeCC
Q 014724 358 GGLAVCLKHAQS----PEFKVYQNKVVSNCRALASRLVEL--GYKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 358 aala~al~~~~~----~~~~~~~~~v~~n~~~l~~~L~~~--G~~v~~~~t~~hlv~vd~~~ 413 (419)
.++..++..... ...++..+++.++++++.+.|++. |+..+......+++|+++..
T Consensus 301 ~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p~~g~~~~~~~~~ 362 (425)
T 2r2n_A 301 LMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIKVKG 362 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCSBSSEEEEEETT
T ss_pred HHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCCCceEEEEEEeCC
Confidence 444445554211 234556677888899999999884 77422223456789999864
No 107
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.86 E-value=3.1e-21 Score=195.10 Aligned_cols=281 Identities=18% Similarity=0.127 Sum_probs=183.1
Q ss_pred hhcccccccC-C---CChHHHHHHHhhhhhccC--CCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCC---CCCCCceeE
Q 014724 102 FKSLELIASE-N---FTSRAVMEAVGSCLTNKY--SEGLPGKRYYGGNEYIDELETLCQKRALAAFNL---DENKWGVNV 172 (419)
Q Consensus 102 ~~~i~L~~se-n---~~~~~V~eal~~~l~~~y--~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~---~~~~~~v~V 172 (419)
.+.|+|..+. + +.++.+++++.+.+.... ..+|+.. .| ..++++.+.+++.+.+|. +++ +|
T Consensus 43 ~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~---~g---~~~lr~~la~~l~~~~g~~~~~~~----~v 112 (425)
T 1vp4_A 43 KDAISFGGGVPDPETFPRKELAEIAKEIIEKEYHYTLQYSTT---EG---DPVLKQQILKLLERMYGITGLDED----NL 112 (425)
T ss_dssp TTCEECCCCSCCGGGSCHHHHHHHHHHHHHHSHHHHTSCCCT---TC---CHHHHHHHHHHHHHHHCCCSCCGG----GE
T ss_pred CCceeCCCCCCCcccCCHHHHHHHHHHHHhhcchhhcCCCCC---CC---CHHHHHHHHHHHHhccCCCCCCcc----cE
Confidence 4567886554 2 257889999888775321 1233321 12 236666666777666684 443 35
Q ss_pred ecCCh-HHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhh--
Q 014724 173 QPLSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL-- 249 (419)
Q Consensus 173 ~~~sG-t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~-- 249 (419)
++++| ++|+..++.++++|||+|++.+|.|.++.. .+...|. +++.++.++ ++ +|+++|++.+++
T Consensus 113 ~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~--------~~~~~g~--~~~~v~~~~-~~-~d~~~l~~~l~~~~ 180 (425)
T 1vp4_A 113 IFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAIN--------AFRQYLA--NFVVVPLED-DG-MDLNVLERKLSEFD 180 (425)
T ss_dssp EEEEHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHH--------HHHTTTC--EEEEEEEET-TE-ECHHHHHHHHHHHH
T ss_pred EEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHH--------HHHHcCC--EEEEeccCC-CC-CCHHHHHHHHHhhh
Confidence 55655 679999999999999999999998866531 2234555 444455553 33 999999999875
Q ss_pred -----cCCeEE-EEcCCCCCC--cC---ChHHHHHHHHHhCCEEEEeccccccccccCCcCCCC---C--CCcEEEeCCC
Q 014724 250 -----FRPKLI-IAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K--YCDVVTTTTH 313 (419)
Q Consensus 250 -----~~pklI-i~~~s~~p~--~~---dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~---~--~~Div~~S~h 313 (419)
.++++| ++++++||+ .. ++++|+++|+++|++||+|++|. ++.+.+....++ + +.+++++|+|
T Consensus 181 ~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~~~~i~~~s~s 259 (425)
T 1vp4_A 181 KNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYG-ALRYEGETVDPIFKIGGPERVVLLNTFS 259 (425)
T ss_dssp HTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSST-TCBCSSCCCCCHHHHHCTTTEEEEEEST
T ss_pred hcccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCc-cccCCCCCCcCHHHhCCCCCEEEEeccc
Confidence 368887 578888875 33 36789999999999999999975 333333211122 1 3568899999
Q ss_pred CcCC-CCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhc-ChHHHHHHHHHHHHHHHHHHHHH
Q 014724 314 KSLR-GPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ-SPEFKVYQNKVVSNCRALASRLV 391 (419)
Q Consensus 314 K~l~-GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~-~~~~~~~~~~v~~n~~~l~~~L~ 391 (419)
|+|+ |.|.|++++++ ++.+.+.........+. +....+++..+++... ....++..+++.++++++.+.|+
T Consensus 260 K~~~~G~r~G~~~~~~------~~~~~l~~~~~~~~~~~-~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 332 (425)
T 1vp4_A 260 KVLAPGLRIGMVAGSK------EFIRKIVQAKQSADLCS-PAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALE 332 (425)
T ss_dssp TTTCGGGCEEEEECCH------HHHHHHHHHHHHHHSSC-CHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccceEEEeeCH------HHHHHHHHHhhhhcCCC-CHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9984 67889999986 66666544322211122 2333344444555431 12346667778889999999998
Q ss_pred hC-----CcEEecCCCcceeEEEEeCC
Q 014724 392 EL-----GYKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 392 ~~-----G~~v~~~~t~~hlv~vd~~~ 413 (419)
+. |+++... ...+++|+++..
T Consensus 333 ~~~~~~~g~~~~~~-~~g~~~~~~~~~ 358 (425)
T 1vp4_A 333 EYFSDIPGVKWVKS-EGGLFIWLTLPE 358 (425)
T ss_dssp HHSTTSTTCEECCC-SBSSEEEEECCT
T ss_pred HhCCCCCceEEecC-CccEEEEEEcCC
Confidence 75 7887642 346789998853
No 108
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.86 E-value=1.1e-20 Score=189.86 Aligned_cols=284 Identities=16% Similarity=0.130 Sum_probs=181.1
Q ss_pred hcccccccC------CCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHH------cC--CCCCCC
Q 014724 103 KSLELIASE------NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAA------FN--LDENKW 168 (419)
Q Consensus 103 ~~i~L~~se------n~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~------~g--~~~~~~ 168 (419)
+.|+|..+. ..+++.|++++.+.+......+|+.. .| ..++++.+.+++.+. .| ++.+
T Consensus 34 ~~i~l~~g~p~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~---~~---~~~lr~~la~~~~~~~~~~~~~~~~~~~~-- 105 (416)
T 1bw0_A 34 PIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPT---VG---SPEAREAVATWWRNSFVHKEELKSTIVKD-- 105 (416)
T ss_dssp CCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSSCCCT---TC---CHHHHHHHHHHHHHHHCCSTTTGGGCCGG--
T ss_pred CeEEecCcCCCcccCCCCCHHHHHHHHHHhhCCccCCcCCC---CC---CHHHHHHHHHHHHhhhcccccCCCCCCcc--
Confidence 457776654 23689999999888754322234321 12 235665555555422 12 3332
Q ss_pred ceeEecCC-hHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCC-CCCCCHHHHHHH
Q 014724 169 GVNVQPLS-GSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKT 246 (419)
Q Consensus 169 ~v~V~~~s-Gt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~-~~~iD~d~Le~~ 246 (419)
+|++++ |++|+..++.++++|||+|++.+|.|.++.. .+...|. +++.++++++ ++.+|+++|++.
T Consensus 106 --~v~~~~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~ 173 (416)
T 1bw0_A 106 --NVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYET--------VCKAYGI--GMHFYNCRPENDWEADLDEIRRL 173 (416)
T ss_dssp --GEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHH--------HHHHTTC--EEEEEEEEGGGTTEECHHHHHHH
T ss_pred --eEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCcHhHHH--------HHHHcCc--EEEEeecCcccCCCCCHHHHHHH
Confidence 244555 5789999999999999999999998876531 2234555 3444444432 467999999999
Q ss_pred hhhcCCeEEEEcCCCCCC--cCC---hHHHHHHHHHhCCEEEEeccccccccccCC----cCCCC---C--CCcEEEeCC
Q 014724 247 AILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASV----VADPF---K--YCDVVTTTT 312 (419)
Q Consensus 247 l~~~~pklIi~~~s~~p~--~~d---l~~I~~ia~~~ga~livD~ah~~Gl~~~g~----~~~~~---~--~~Div~~S~ 312 (419)
+++ ++++|++++|+||+ ..+ +++|+++|++||++||+|++|. ++.+.+. ...++ + ..+++++|+
T Consensus 174 l~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~~~~~~~~i~~~s~ 251 (416)
T 1bw0_A 174 KDD-KTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYA-GMVFKGKDPNATFTSVADFETTVPRVILGGT 251 (416)
T ss_dssp CCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTT-TCBCCSSCTTCCCCCTTSSCCSCCEEEEEES
T ss_pred hcc-CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEcccc-ccccCCCCCCCCccCHHHccCCCcEEEEecc
Confidence 874 68888888888874 455 8999999999999999999975 3444332 11122 1 124788999
Q ss_pred CCcC--CCCCeeEEEEeCC-CcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHH
Q 014724 313 HKSL--RGPRGGMIFFKKD-PVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASR 389 (419)
Q Consensus 313 hK~l--~GprgG~i~~~~~-~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~ 389 (419)
||+| +|.|.|+++++++ ... ..+...+...... ..+++....+++..+++......+++..+++.++++++.+.
T Consensus 252 sK~~~~~Glr~G~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 328 (416)
T 1bw0_A 252 AKNLVVPGWRLGWLLYVDPHGNG-PSFLEGLKRVGML--VCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNH 328 (416)
T ss_dssp TTTTSCGGGCCEEEEEECTTCSC-HHHHHHHHHHHHH--HTCSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCCCCceEEEEEeeCchhhH-HHHHHHHHHHhcc--ccCCCcHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 9986 6778999998773 110 1233222221100 11233444455555565332234577888899999999999
Q ss_pred HHhC-CcEEecCCCcceeEEEEeC
Q 014724 390 LVEL-GYKLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 390 L~~~-G~~v~~~~t~~hlv~vd~~ 412 (419)
|++. |+++..+ ...+++|+++.
T Consensus 329 L~~~~g~~~~~~-~~~~~~~~~~~ 351 (416)
T 1bw0_A 329 IGECIGLAPTMP-RGAMYLMSRID 351 (416)
T ss_dssp HTTSTTEEECCC-CBTTEEEEEEC
T ss_pred HHhCCCCcccCC-CeeEEEEEeCC
Confidence 9987 8887642 34566788774
No 109
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.86 E-value=8e-21 Score=193.16 Aligned_cols=280 Identities=13% Similarity=0.117 Sum_probs=172.5
Q ss_pred hcccccccCCC--ChHHHHHHHhhhhhccC----CCCCCCCCCCCchhHHHHHHHHHHHHHHHHcC--CCCCCCceeEec
Q 014724 103 KSLELIASENF--TSRAVMEAVGSCLTNKY----SEGLPGKRYYGGNEYIDELETLCQKRALAAFN--LDENKWGVNVQP 174 (419)
Q Consensus 103 ~~i~L~~sen~--~~~~V~eal~~~l~~~y----~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g--~~~~~~~v~V~~ 174 (419)
+.|+|..+++. +++.|++++.+.+.+.. ..+|+ ......++++.+.+++. +| ++++ +|++
T Consensus 70 ~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~------~~~g~~~lr~~ia~~~~--~g~~~~~~----~i~~ 137 (449)
T 3qgu_A 70 KIISLGIGDTTEPLPKYIADAMAKAAAGLATREGYSGYG------AEQGQGALREAVASTFY--GHAGRAAD----EIFI 137 (449)
T ss_dssp CCEECSSCCCCCCCCHHHHHHHHHHHHGGGGSCCCCCST------TTTCCHHHHHHHHHHHH--TTTTCCGG----GEEE
T ss_pred CEEEeeCCCCCCCCCHHHHHHHHHHHHhhccccCCCCCC------CCCCcHHHHHHHHHHHH--cCCCCCHH----HEEE
Confidence 46888877642 68999999988876321 11232 11112356654444443 33 4443 3555
Q ss_pred CCh-HHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccc--------cEEEecccCCC-CCCCCHHHHH
Q 014724 175 LSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY--------FESMPYRLDES-TGLVDYDMLE 244 (419)
Q Consensus 175 ~sG-t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~--------~~~v~~~~~~~-~~~iD~d~Le 244 (419)
++| ++++..+ .++++|||+|++.+|.|.++.. .+...|.. ++++.++++++ +...|++++
T Consensus 138 t~G~~~al~~~-~~l~~~gd~Vl~~~p~~~~~~~--------~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 207 (449)
T 3qgu_A 138 SDGSKCDIARI-QMMFGSKPTVAVQDPSYPVYVD--------TSVMMGMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKA- 207 (449)
T ss_dssp ESCHHHHHHHH-HHHHCSSSCEEEEESCCTHHHH--------HHHHHTCSCCBCSSSBTTEEEEECCGGGTTCCCGGGC-
T ss_pred ccCHHHHHHHH-HHHhCCCCEEEEcCCCChhHHH--------HHHHcCCcccccccccceeEEEecccccCCcCChhHc-
Confidence 655 5677777 8899999999999999877642 12233432 11444444432 345554331
Q ss_pred HHhhhcCCeEEEEcCCCCCC--cC---ChHHHHHHHHHhCCEEEEeccccccccccCCcCCC---CC---CCcEEEeCCC
Q 014724 245 KTAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADP---FK---YCDVVTTTTH 313 (419)
Q Consensus 245 ~~l~~~~pklIi~~~s~~p~--~~---dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~---~~---~~Div~~S~h 313 (419)
.++++|++++|+||+ .. ++++|+++|++||++||+|++|. ++...+..+.+ ++ +.+++++|+|
T Consensus 208 -----~~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~-~~~~~~~~~~~~~~~~~~~~~~i~~~s~s 281 (449)
T 3qgu_A 208 -----KRTDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYA-LYISNPDCPKTIYEIPGADEVAIETCSFS 281 (449)
T ss_dssp -----CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTG-GGCCCTTSCSSGGGSTTGGGTEEEEEECS
T ss_pred -----CCCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchH-hhhcCCCCCCCHhhccCCCCcEEEEecch
Confidence 478999998999985 23 47889999999999999999975 44443322211 11 3468999999
Q ss_pred CcC--CCCCeeEEEEeCCCcc--hhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHH
Q 014724 314 KSL--RGPRGGMIFFKKDPVL--GVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASR 389 (419)
Q Consensus 314 K~l--~GprgG~i~~~~~~~~--~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~ 389 (419)
|+| +|+|.|+++++++.+. ...+...+.........+. +....++...++.....+..++..+++.+++++|.+.
T Consensus 282 K~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 360 (449)
T 3qgu_A 282 KYAGFTGVRLGWTVVPKALKYANGEPVHADWNRVMTTCFNGA-SNIVQAGGLACLQPEGLKEMNAMIKFYKENAQILKTT 360 (449)
T ss_dssp GGGTCTTCCCEEEECCTTCBCTTSCBHHHHHHHHHHHSCCCC-CHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhcCCccceeEEEecCHHHHhhhhhhHHHHHHHHhhcccCCC-CHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 997 5889999999875321 0001112221111111222 3333333333443311134577888899999999999
Q ss_pred HHhCCcEEecCCCcceeEEEEeC
Q 014724 390 LVELGYKLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 390 L~~~G~~v~~~~t~~hlv~vd~~ 412 (419)
|++.|+++..+ ...+++|+++.
T Consensus 361 L~~~g~~~~~~-~~~~~~~~~~~ 382 (449)
T 3qgu_A 361 FTEMGFSVYGG-DDAPYIWVGFP 382 (449)
T ss_dssp HHHTTCCEEES-SSSSEEEEECT
T ss_pred HHHCCCeeeCC-CCeeEEEEECC
Confidence 99999988753 34678999986
No 110
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.86 E-value=1.7e-21 Score=193.20 Aligned_cols=251 Identities=14% Similarity=0.089 Sum_probs=170.7
Q ss_pred cccccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHH
Q 014724 106 ELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVY 185 (419)
Q Consensus 106 ~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~ 185 (419)
++..+...+++.+++++.+.+...+ | + ..+...++| +.+++++|.+. .++++||++|+..++
T Consensus 7 ~l~~~~~~~~~~~~~a~~~~~~~~~---~-----~-~~~~~~~l~----~~la~~~~~~~-----~i~~~sgt~al~~~l 68 (373)
T 3frk_A 7 SFKPMHDEIEYEIKFKFEEIYKRNW---F-----I-LGDEDKKFE----QEFADYCNVNY-----CIGCGNGLDALHLIL 68 (373)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTC---C-----S-SSHHHHHHH----HHHHHHHTSSE-----EEEESCHHHHHHHHH
T ss_pred CCCcccCCCCHHHHHHHHHHHHCCC---c-----c-CCchHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHH
Confidence 3333334467888999888775432 1 1 123334454 67888899864 377889999999999
Q ss_pred HHc-cCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC
Q 014724 186 TAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR 264 (419)
Q Consensus 186 ~al-l~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~ 264 (419)
.++ ++|||+|+++.++|.++.. .+...|. +++.++++++++.+|+++|++.+++ ++++|++++ .++.
T Consensus 69 ~~l~~~~gd~Vi~~~~~~~~~~~--------~~~~~g~--~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~n-~~G~ 136 (373)
T 3frk_A 69 KGYDIGFGDEVIVPSNTFIATAL--------AVSYTGA--KPIFVEPDIRTYNIDPSLIESAITE-KTKAIIAVH-LYGQ 136 (373)
T ss_dssp HHTTCCTTCEEEEETTSCTHHHH--------HHHHHSC--EEEEECEETTTTEECGGGTGGGCCT-TEEEEEEEC-CTTC
T ss_pred HHcCCCCcCEEEECCCCcHHHHH--------HHHHcCC--EEEEEeccccccCcCHHHHHHhcCC-CCeEEEEEC-CCcC
Confidence 999 9999999999998877542 2334455 5556666656789999999999875 788888654 3456
Q ss_pred cCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC-CCcEEEeCCC--CcCCC-CCeeEEEEeCCCcchhhHHHHh
Q 014724 265 DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTH--KSLRG-PRGGMIFFKKDPVLGVELESAI 340 (419)
Q Consensus 265 ~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~-~~Div~~S~h--K~l~G-prgG~i~~~~~~~~~~~l~~~i 340 (419)
..|+++|.++|+++|++||+|++|..|....+. ++. ..|++++|+| |++++ +.||+++++++ ++.+++
T Consensus 137 ~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~---~~~~~~d~~~~S~~~~K~l~~~g~gg~~~~~~~-----~~~~~~ 208 (373)
T 3frk_A 137 PADMDEIKRIAKKYNLKLIEDAAQAHGSLYKGM---KVGSLGDAAGFSFYPAKNLGSLGDGGAVVTNDK-----DLAEKI 208 (373)
T ss_dssp CCCHHHHHHHHHHHTCEEEEECTTCTTCEETTE---ETTSSSSEEEEECCTTSSSCCSSSCEEEEESCH-----HHHHHH
T ss_pred cccHHHHHHHHHHcCCEEEEECCcccCCEECCE---eccccccEEEEeCcCCCccCccceeEEEEeCCH-----HHHHHH
Confidence 789999999999999999999999877654322 111 3689888855 99977 67899998774 455554
Q ss_pred hhcccCCC--------CCC-Ch-HHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEe
Q 014724 341 NNAVFPGL--------QGG-PH-NHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLV 398 (419)
Q Consensus 341 ~~~~~~~~--------~g~-p~-~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~ 398 (419)
......+. .|. .. ....+++ ++... ..++++.++..++++++.+.|.+.++.+.
T Consensus 209 ~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~--~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 272 (373)
T 3frk_A 209 KALSNYGSEKKYHHIYKGFNSRLDELQAGF--LRVKL--KYLDKWNEERRKIAQKYIAGINNPNVIIP 272 (373)
T ss_dssp HHHHBTTCSBTTBCCSCCCBCCCCHHHHHH--HHHHH--HTHHHHHHHHHHHHHHHHHHCCCTTEECC
T ss_pred HHHHhcCcccCCccccccccCCCCHHHHHH--HHHHH--HHHHHHHHHHHHHHHHHHHHhccCceEec
Confidence 43221111 110 01 1112222 22222 34567788888999999999988775543
No 111
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.86 E-value=1.5e-20 Score=185.46 Aligned_cols=266 Identities=14% Similarity=0.115 Sum_probs=180.3
Q ss_pred hhcccccccCCC--ChHHHHHHHhhhhhccC--CCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCCh
Q 014724 102 FKSLELIASENF--TSRAVMEAVGSCLTNKY--SEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG 177 (419)
Q Consensus 102 ~~~i~L~~sen~--~~~~V~eal~~~l~~~y--~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sG 177 (419)
.+.|+|..+++. +++.|++++.+.+.+.. ..+|+.. + ..+++ +++++++|+++++ .+++++|
T Consensus 26 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~----~---~~~lr----~~la~~~g~~~~~---i~~t~g~ 91 (360)
T 3hdo_A 26 ASWIKLNTNENPYPPSPEVVKAILEELGPDGAALRIYPSA----S---SQKLR----EVAGELYGFDPSW---IIMANGS 91 (360)
T ss_dssp TTSEECSSCCCSSCCCHHHHHHHHHHHTTTCGGGGSCCCS----S---CHHHH----HHHHHHHTCCGGG---EEEESSH
T ss_pred cceeeccCCCCCCCCCHHHHHHHHHHHhcccchhhcCCCC----c---hHHHH----HHHHHHhCcCcce---EEEcCCH
Confidence 356888887764 57999999998876530 1244431 1 12444 6778888987641 2455566
Q ss_pred HHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEE
Q 014724 178 SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIA 257 (419)
Q Consensus 178 t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~ 257 (419)
++|+..++.++++|||+|++.+|.|.++.. .+...|. +++.+++++ ++.+ +++ .+..++|+|++
T Consensus 92 ~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~--------~~~~~g~--~~~~v~~~~-~~~~--~~l---~~~~~~~~v~i 155 (360)
T 3hdo_A 92 DEVLNNLIRAFAAEGEEIGYVHPSYSYYGT--------LAEVQGA--RVRTFGLTG-DFRI--AGF---PERYEGKVFFL 155 (360)
T ss_dssp HHHHHHHHHHHCCTTCEEEEESSSCTHHHH--------HHHHHTC--EEEEECBCT-TSSB--TTC---CSSBCSSEEEE
T ss_pred HHHHHHHHHHHhCCCCEEEEcCCChHHHHH--------HHHHCCC--EEEEeeCCC-CCCH--HHH---HhhcCCCEEEE
Confidence 789999999999999999999998876531 2234454 455555542 3444 333 33346789999
Q ss_pred cCCCCC--CcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcC--CCCCeeEEEEeCCCc
Q 014724 258 GASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSL--RGPRGGMIFFKKDPV 331 (419)
Q Consensus 258 ~~s~~p--~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l--~GprgG~i~~~~~~~ 331 (419)
++++|| ...|.++|.++|+++|++||+|++|. ++...+... ..+ ..+++++|+||++ +|.|.|++++++
T Consensus 156 ~~p~nptG~~~~~~~l~~l~~~~~~~li~De~~~-~~~~~~~~~-~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~--- 230 (360)
T 3hdo_A 156 TTPNAPLGPSFPLEYIDELARRCAGMLVLDETYA-EFAESNALE-LVRRHENVVVTRTLSKSYSLAGMRIGLAIARP--- 230 (360)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHBSSEEEEECTTG-GGSSCCCTH-HHHHCSSEEEEEESTTTTSCTTSCCEEEECCH---
T ss_pred eCCCCCCCCCcCHHHHHHHHHHCCCEEEEECChH-hhCCcchhH-HhccCCCEEEEecchHhhcCCccceeeEeeCH---
Confidence 988887 46799999999999999999999975 332111000 011 3458899999996 678889999876
Q ss_pred chhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeEEEEe
Q 014724 332 LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDL 411 (419)
Q Consensus 332 ~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~vd~ 411 (419)
++.+.+.....++ +++....+++..+++. .+.+++..+++.++++++.+.|++.|+++.. ...+++|+++
T Consensus 231 ---~~~~~~~~~~~~~---~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~--~~~~~~~~~~ 300 (360)
T 3hdo_A 231 ---EVIAALDKIRDHY---NLDRLAQAACVAALRD--QAYLSECCRRIRETREWFTTELRSIGYDVIP--SQGNYLFATP 300 (360)
T ss_dssp ---HHHHHHHHHSCSC---CSCHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHHHHHHHHTTCEECC--CSSSEEEEEC
T ss_pred ---HHHHHHHHhCCCC---CCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCEEcC--CCccEEEEEC
Confidence 6777776544332 2334444444445553 1345788888999999999999999998764 3456678776
Q ss_pred C
Q 014724 412 R 412 (419)
Q Consensus 412 ~ 412 (419)
.
T Consensus 301 ~ 301 (360)
T 3hdo_A 301 P 301 (360)
T ss_dssp T
T ss_pred C
Confidence 5
No 112
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.86 E-value=1.1e-20 Score=186.62 Aligned_cols=261 Identities=14% Similarity=0.096 Sum_probs=172.4
Q ss_pred cCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHc-
Q 014724 110 SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI- 188 (419)
Q Consensus 110 sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~al- 188 (419)
+...+++.|++++.+.+.+.+ .++ + ....+ +++.+++++|.+. + ++++||++|+..++.++
T Consensus 7 ~~~~~~~~v~~a~~~~~~~~~--~~~------~-~~~~~----l~~~la~~~~~~~----v-~~~~ggt~al~~~~~~~~ 68 (375)
T 2fnu_A 7 SEPCLDKEDKKAVLEVLNSKQ--LTQ------G-KRSLL----FEEALCEFLGVKH----A-LVFNSATSALLTLYRNFS 68 (375)
T ss_dssp CCCCCCHHHHHHHHHHHTSSC--CSS------S-HHHHH----HHHHHHHHHTCSE----E-EEESCHHHHHHHHHHHSS
T ss_pred CCCCCCHHHHHHHHHHHHcCc--ccC------C-hHHHH----HHHHHHHHhCCCe----E-EEeCCHHHHHHHHHHHhc
Confidence 456789999999998885432 122 2 22334 4467888999862 3 66778899999999999
Q ss_pred --cCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCCcC
Q 014724 189 --LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDF 266 (419)
Q Consensus 189 --l~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~~~ 266 (419)
++|||+|++++++|.++.. .+...|. +++.+++++ ++.+|+++|++.+++ ++++|+++++ ++...
T Consensus 69 ~~~~~gd~Vl~~~~~~~~~~~--------~~~~~g~--~~~~~~~~~-~~~~d~~~l~~~i~~-~~~~v~~~~~-tG~~~ 135 (375)
T 2fnu_A 69 EFSADRNEIITTPISFVATAN--------MLLESGY--TPVFAGIKN-DGNIDELALEKLINE-RTKAIVSVDY-AGKSV 135 (375)
T ss_dssp CCCTTSCEEEECSSSCTHHHH--------HHHHTTC--EEEECCBCT-TSSBCGGGSGGGCCT-TEEEEEEECG-GGCCC
T ss_pred ccCCCCCEEEECCCccHhHHH--------HHHHCCC--EEEEeccCC-CCCCCHHHHHhhcCc-CceEEEEeCC-cCCcc
Confidence 8999999999998877642 2234454 556666654 358999999998864 7888877776 77778
Q ss_pred ChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC-CCcEEEeCC--CCcCCCCCeeEEEE-eCCCcchhhHHHHhhh
Q 014724 267 DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTT--HKSLRGPRGGMIFF-KKDPVLGVELESAINN 342 (419)
Q Consensus 267 dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~-~~Div~~S~--hK~l~GprgG~i~~-~~~~~~~~~l~~~i~~ 342 (419)
|+++|.++|++||++||+|++|..|....+. .+. ..|+++.|+ ||++ |+..|+++. +++ ++.+++..
T Consensus 136 ~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~---~~~~~~~i~~~s~s~~K~~-~~g~g~~~~~~~~-----~~~~~~~~ 206 (375)
T 2fnu_A 136 EVESVQKLCKKHSLSFLSDSSHALGSEYQNK---KVGGFALASVFSFHAIKPI-TTAEGGAVVTNDS-----ELHEKMKL 206 (375)
T ss_dssp CHHHHHHHHHHHTCEEEEECTTCTTCEETTE---ETTSSSSEEEEECCTTSSS-CCSSCEEEEESCH-----HHHHHHHH
T ss_pred CHHHHHHHHHHcCCEEEEECccccCCeECCe---eccccCCeEEEeCCCCCCc-cccCceEEEeCCH-----HHHHHHHH
Confidence 9999999999999999999999776543221 122 235665555 5998 443366665 433 56555543
Q ss_pred cccCCC------------CCCC-hHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEEecC--C--Ccc
Q 014724 343 AVFPGL------------QGGP-HNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSG--G--SDN 404 (419)
Q Consensus 343 ~~~~~~------------~g~p-~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~~~--~--t~~ 404 (419)
....+. .+.+ ....+.+ +.++... ..+++..+++.++++++.+.|++. |+++... + ...
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-a~~~~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~ 283 (375)
T 2fnu_A 207 FRSHGMLKKDFFEGEVKSIGHNFRLNEIQS-ALGLSQL--KKAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSN 283 (375)
T ss_dssp HTBTTEEESSSSCEEESSCCCBCCCCHHHH-HHHHHHH--TTHHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCC
T ss_pred HHhcCCccccccccccccccccCCCCHHHH-HHHHHHH--HHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCCCcce
Confidence 221110 1110 1111211 1222222 346778888999999999999997 8887643 1 234
Q ss_pred eeEEEEeCC
Q 014724 405 HLVLVDLRP 413 (419)
Q Consensus 405 hlv~vd~~~ 413 (419)
+++++.+..
T Consensus 284 ~~~~~~~~~ 292 (375)
T 2fnu_A 284 HLYPILMHQ 292 (375)
T ss_dssp SCEEEEECG
T ss_pred EEEEEEeCc
Confidence 666777754
No 113
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.86 E-value=1.3e-20 Score=190.07 Aligned_cols=267 Identities=16% Similarity=0.125 Sum_probs=173.9
Q ss_pred CCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHc-cC
Q 014724 112 NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LK 190 (419)
Q Consensus 112 n~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~al-l~ 190 (419)
..+++.+++++.+.+.+.....|+. ..|.. ++.+.+++++++++|.+. .+++++|++|+..++.++ ++
T Consensus 12 ~~~~~~~~~a~~~~~~~~~~~~~~~---~~g~~---~l~~~l~~~la~~~g~~~-----~i~~~~gt~al~~~~~~~~~~ 80 (418)
T 2c81_A 12 PQHSDRTRRKIEEVFQSNRWAISGY---WTGEE---SMERKFAKAFADFNGVPY-----CVPTTSGSTALMLALEALGIG 80 (418)
T ss_dssp SCCCHHHHHHHHHHHHHTCCSTTSB---CCSSC---CHHHHHHHHHHHHHTCSE-----EEEESCHHHHHHHHHHHTTCC
T ss_pred CCCCHHHHHHHHHHHhcCCccccCc---ccCCH---HHHHHHHHHHHHHhCCCc-----EEEeCCHHHHHHHHHHHcCCC
Confidence 3468999999988876432111321 12221 222234577888999873 377889999999999999 89
Q ss_pred CCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCCcCChHH
Q 014724 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPR 270 (419)
Q Consensus 191 pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~~~dl~~ 270 (419)
|||+|+++.++|.++.. .+...|. +++.++++++++.+|+++|++.+++ ++++|+++++ ++...|+++
T Consensus 81 ~gd~Vl~~~~~~~~~~~--------~~~~~g~--~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~-~G~~~~~~~ 148 (418)
T 2c81_A 81 EGDEVIVPSLTWIATAT--------AVLNVNA--LPVFVDVEADTYCIDPQLIKSAITD-KTKAIIPVHL-FGSMANMDE 148 (418)
T ss_dssp TTCEEEEESSSCTHHHH--------HHHHTTC--EEEEECBCTTTCSBCHHHHGGGCCT-TEEEECCBCC-TTCCCCHHH
T ss_pred CcCEEEECCCccHhHHH--------HHHHcCC--EEEEEecCCCCCCcCHHHHHHhhCC-CCeEEEEeCC-cCCcccHHH
Confidence 99999999998877642 2334555 5555666655788999999999874 7898888764 456789999
Q ss_pred HHHHHHHhCCEEEEeccccccccccCCcCCCCCCCcEEEeCC--CCcCCCCCeeEEEEeCCCcchhhHHHHhhhcccCC-
Q 014724 271 MRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTT--HKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPG- 347 (419)
Q Consensus 271 I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~~~Div~~S~--hK~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~- 347 (419)
|.++|+++|++||+|++|..|..+.+..... ..|+++.|+ ||++++++||+++++++ ++.+++......+
T Consensus 149 i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~--~~~~~~~s~s~~K~~~~g~~g~~~~~~~-----~l~~~~~~~~~~~~ 221 (418)
T 2c81_A 149 INEIAQEHNLFVIEDCAQSHGSVWNNQRAGT--IGDIGAFSCQQGKVLTAGEGGIIVTKNP-----RLFELIQQLRADSR 221 (418)
T ss_dssp HHHHHHHTTCEEEEECTTCTTCEETTEETTS--SSSEEEEECCTTSSSCSSSCEEEEESCH-----HHHHHHHHHHBTTE
T ss_pred HHHHHHHCCCEEEEECcccccCccCCEeccc--ccceEEEeccCCcccCCCCeEEEEECCH-----HHHHHHHHHHHhCc
Confidence 9999999999999999987764332211111 235666666 99985558899998643 5555443211111
Q ss_pred -------------C--------CCC--ChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEEecCCCc
Q 014724 348 -------------L--------QGG--PHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSD 403 (419)
Q Consensus 348 -------------~--------~g~--p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~~~~t~ 403 (419)
. .|- ......+++ .+... +.++++.++..++++++.+.|.+. |+++......
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~--~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~ 297 (418)
T 2c81_A 222 VYCDDSSELMHGDMQLVKKGDIQGSNYCLSEFQSAI--LLDQL--QELDDKNAIREKNAMFLNDALSKIDGIKVMKRPPQ 297 (418)
T ss_dssp EECSCGGGCCTTCBSEEECCSSCCCBCCCCHHHHHH--HHHHH--TTHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCTT
T ss_pred cccccccccccchhhccccccccCcCCCcCHHHHHH--HHHHH--HHHHHHHHHHHHHHHHHHHHhccCCCcccCCCCCC
Confidence 0 000 000111222 22222 235677888888999999999887 8887631111
Q ss_pred ----c-eeEEEEeC
Q 014724 404 ----N-HLVLVDLR 412 (419)
Q Consensus 404 ----~-hlv~vd~~ 412 (419)
. |++.+++.
T Consensus 298 ~~~~~~~~~~~~~~ 311 (418)
T 2c81_A 298 VSRQTYYGYVFRFD 311 (418)
T ss_dssp EEECCCSEEEEEEC
T ss_pred CcccccEEEEEEEc
Confidence 2 45557765
No 114
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.86 E-value=1.6e-21 Score=192.38 Aligned_cols=278 Identities=13% Similarity=0.068 Sum_probs=178.0
Q ss_pred hcccccccCCCChHHHHHHHhhhhhccCCCCCC--CCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEec-CChHH
Q 014724 103 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLP--GKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQP-LSGSP 179 (419)
Q Consensus 103 ~~i~L~~sen~~~~~V~eal~~~l~~~y~~g~p--~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~-~sGt~ 179 (419)
..+.+.+++..+|+.|++++.+.+.+.+..|.. ...++ +... .++.+.+++++++++|++.+ +.+ +++ ++|++
T Consensus 4 ~~~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~la~~~g~~~~-~~~-i~~t~g~t~ 79 (362)
T 2c0r_A 4 RAYNFNAGPAALPLEVLERAQAEFVDYQHTGMSIMEMSHR-GAVY-EAVHNEAQARLLALLGNPTG-YKV-LFIQGGAST 79 (362)
T ss_dssp CCEECCSSSCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTT-SHHH-HHHHHHHHHHHHHHTTCCSS-EEE-EEESSHHHH
T ss_pred ceeeccCCCCCCCHHHHHHHHHHHhhhhhcCccccccCCC-cHHH-HHHHHHHHHHHHHHhCCCCC-cEE-EEECCCchH
Confidence 346788888889999999999887543221111 00111 2232 34444678999999999752 112 445 45688
Q ss_pred HHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCC-CCCCCCHHHHHHHhhhcCCeEEEEc
Q 014724 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKLIIAG 258 (419)
Q Consensus 180 A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~-~~~~iD~d~Le~~l~~~~pklIi~~ 258 (419)
|+..++.++++|||+|+++++.+.++. .. ..+...| .+..++++.+. .+..+|.++++ +. .++|+|+++
T Consensus 80 a~~~~~~~l~~~gd~vl~~~~~~~~~~--~~----~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i~-~~t~~v~~~ 149 (362)
T 2c0r_A 80 QFAMIPMNFLKEGQTANYVMTGSWASK--AL----KEAKLIG-DTHVAASSEASNYMTLPKLQEIQ--LQ-DNAAYLHLT 149 (362)
T ss_dssp HHHHHHHHHCCTTCEEEEEECSHHHHH--HH----HHHHHHS-CEEEEEECGGGTTCSCCCGGGCC--CC-TTEEEEEEE
T ss_pred HHHHHHHhcCCCCCeEEEEecCcHhHH--HH----HHHHHhC-CeEEEecccccccccCCCHHHcc--cC-CCcCEEEEe
Confidence 999999999999999998865433321 00 0122345 55555543211 12246776654 44 378999998
Q ss_pred CCCCCC---cCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCCCCcEEEeCCCCcCCCCCe-eEEEEeCCCcchh
Q 014724 259 ASAYPR---DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGV 334 (419)
Q Consensus 259 ~s~~p~---~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~~~Div~~S~hK~l~Gprg-G~i~~~~~~~~~~ 334 (419)
+++||+ ..|+++| +|+++++|++|..|.. +.++...|++++|+||++ ||.| |+++++++
T Consensus 150 ~~~n~tG~~~~~l~~i------~~~~vivD~a~~~~~~-----~~~~~~~d~~~~s~~K~~-g~~G~G~l~~~~~----- 212 (362)
T 2c0r_A 150 SNETIEGAQFKAFPDT------GSVPLIGDMSSDILSR-----PFDLNQFGLVYAGAQKNL-GPSGVTVVIVRED----- 212 (362)
T ss_dssp SEETTTTEECSSCCCC------TTSCEEEECTTTTTSS-----CCCGGGCSEEEEETTTTT-CCSSCEEEEEEGG-----
T ss_pred CCcCccceeccccccc------CCCEEEEEChhhccCC-----ccchhHCcEEEEeccccc-cCcCcEEEEEcHH-----
Confidence 888774 2456665 8999999999876632 222333499999999998 6777 99999874
Q ss_pred hHHHHhhhc---c--------cCCCCCCChHHHHHHHHHHHHHhcCh-HHHHHHHHHHHHHHHHHHHHHhCC-c-EEecC
Q 014724 335 ELESAINNA---V--------FPGLQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVELG-Y-KLVSG 400 (419)
Q Consensus 335 ~l~~~i~~~---~--------~~~~~g~p~~~~iaala~al~~~~~~-~~~~~~~~v~~n~~~l~~~L~~~G-~-~v~~~ 400 (419)
+.+.+... . .....++++...++++..+++.+... ++++..+++.++++++.+.|++.| + ++...
T Consensus 213 -~~~~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 291 (362)
T 2c0r_A 213 -LVAESPKHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVD 291 (362)
T ss_dssp -GSSSCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESSC
T ss_pred -HHhhccccCchHHhHHHHhhccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcCCccccCCC
Confidence 32222210 0 00123456666677777788765433 568889999999999999999987 6 77532
Q ss_pred C--CcceeEEEEeC
Q 014724 401 G--SDNHLVLVDLR 412 (419)
Q Consensus 401 ~--t~~hlv~vd~~ 412 (419)
. ...+.+++.+.
T Consensus 292 ~~~~~~~~~~~~~~ 305 (362)
T 2c0r_A 292 VDSRSDMNITFRLA 305 (362)
T ss_dssp GGGBCSSEEEEECS
T ss_pred hHHcCCcEEEEEcC
Confidence 1 12345777764
No 115
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.86 E-value=2.1e-20 Score=183.16 Aligned_cols=274 Identities=15% Similarity=0.127 Sum_probs=174.6
Q ss_pred hcccccccC-CCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHH
Q 014724 103 KSLELIASE-NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPAN 181 (419)
Q Consensus 103 ~~i~L~~se-n~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~ 181 (419)
..|.|..+. ...++.|++++.+.+.. |..+ |+..+ +.+.+++++++++| .. + ..+++++|++|+
T Consensus 8 ~~id~~~~~~~~~~~~v~~a~~~~~~~-~~~~------~~~~~----~~~~l~~~la~~~g-~~--~-~v~~~~~gt~a~ 72 (356)
T 1v72_A 8 PALGFSSDNIAGASPEVAQALVKHSSG-QAGP------YGTDE----LTAQVKRKFCEIFE-RD--V-EVFLVPTGTAAN 72 (356)
T ss_dssp CCCBCSCGGGCCCCHHHHHHHHHTTSS-CCCS------TTCSH----HHHHHHHHHHHHHT-SC--C-EEEEESCHHHHH
T ss_pred ceEeeccCCccCCCHHHHHHHHhhccC-cccc------cccch----HHHHHHHHHHHHhC-CC--C-cEEEeCCccHHH
Confidence 345665543 24689999999876532 2222 22222 33345578899999 32 2 126667889999
Q ss_pred HHHHHHccCCCCEEEEeCCCCCccccCcccccccccccc--ccccEEEecccCCCCCCCCHHHHHH-Hhhhc------CC
Q 014724 182 FEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGT--SIYFESMPYRLDESTGLVDYDMLEK-TAILF------RP 252 (419)
Q Consensus 182 ~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~--g~~~~~v~~~~~~~~~~iD~d~Le~-~l~~~------~p 252 (419)
..++.++++|||+|++.++.|+++...+ .+... |. ++++++.+ ++.+|+++|++ .+++. ++
T Consensus 73 ~~al~~~~~~gd~vi~~~~~~~~~~~~~------~~~~~~~g~--~~~~v~~~--~~~~d~~~l~~~~i~~~~~~~~~~~ 142 (356)
T 1v72_A 73 ALCLSAMTPPWGNIYCHPASHINNDECG------APEFFSNGA--KLMTVDGP--AAKLDIVRLRERTREKVGDVHTTQP 142 (356)
T ss_dssp HHHHHTSCCTTEEEEECTTSHHHHSSTT------HHHHHTTSC--EEEECCCG--GGCCCHHHHHHHTTSSTTCTTSCEE
T ss_pred HHHHHHhcCCCCEEEEcCccchhhhhch------HHHHHhCCc--EEEEecCC--CCeEcHHHHHHHhhhcchhhccCCc
Confidence 9999999999999999988765543210 02233 54 45555443 46899999999 88642 57
Q ss_pred eEEEEcCCCC-CC---cCChHHHHHHHHHhCCEEEEecccccccc-ccCCcCCCC--C-CCcEEEeCCCCcCCCCCe-eE
Q 014724 253 KLIIAGASAY-PR---DFDYPRMRQIADAVGALLMMDMAHISGLV-AASVVADPF--K-YCDVVTTTTHKSLRGPRG-GM 323 (419)
Q Consensus 253 klIi~~~s~~-p~---~~dl~~I~~ia~~~ga~livD~ah~~Gl~-~~g~~~~~~--~-~~Div~~S~hK~l~Gprg-G~ 323 (419)
++|+++++++ +. ..++++|+++|++||++||+|++|..+.. ..+..+..+ + ++|+++.|+||+ .+|.| |+
T Consensus 143 ~~v~~~~~~~tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~-g~~~G~g~ 221 (356)
T 1v72_A 143 ACVSITQATEVGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKN-GVLAAEAI 221 (356)
T ss_dssp EEEEEESSCTTSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGGGTCCEEEECCGGG-TCSSCEEE
T ss_pred eEEEEEcCCCCCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHhhhhhcCCEEEEecccC-CCcCccEE
Confidence 8888887654 34 34688999999999999999999854321 222222222 2 678999999998 55666 68
Q ss_pred EEEeCCCcchhhHHHHhhhcc-cCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEEecCC
Q 014724 324 IFFKKDPVLGVELESAINNAV-FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGG 401 (419)
Q Consensus 324 i~~~~~~~~~~~l~~~i~~~~-~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~~~~ 401 (419)
+++++ ++.+++.... ..+....+ ... +...++..+....+.++.+++.++++++.+.|++. |+++..+
T Consensus 222 ~~~~~------~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~- 291 (356)
T 1v72_A 222 VLFNT------SLATEMSYRRKRAGHLSSK--MRF-LSAQIDAYLTDDLWLRNARKANAAAQRLAQGLEGLGGVEVLGG- 291 (356)
T ss_dssp EESSG------GGHHHHHHHHHHTTCCCSS--THH-HHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEESC-
T ss_pred EEECH------HHHhhHHHHhhccCchhhh--HHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhCCCcEEccC-
Confidence 87766 4444433211 11111111 112 22223334433345667788889999999999985 9987642
Q ss_pred CcceeEEEEeC
Q 014724 402 SDNHLVLVDLR 412 (419)
Q Consensus 402 t~~hlv~vd~~ 412 (419)
...+++|+++.
T Consensus 292 ~~~~~~~~~~~ 302 (356)
T 1v72_A 292 TEANILFCRLD 302 (356)
T ss_dssp CCSSEEEEEEC
T ss_pred CCccEEEEEcC
Confidence 45678888864
No 116
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.86 E-value=8.6e-21 Score=190.39 Aligned_cols=274 Identities=15% Similarity=0.122 Sum_probs=178.1
Q ss_pred ccccccC-CCChHHHHHHHhhhhhccCCCCCCCC--CCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHH
Q 014724 105 LELIASE-NFTSRAVMEAVGSCLTNKYSEGLPGK--RYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPAN 181 (419)
Q Consensus 105 i~L~~se-n~~~~~V~eal~~~l~~~y~~g~p~~--r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~ 181 (419)
+.|..+. .+.|+.|++++.+.+.+.+ +++.. ++..|. ...++ .+++++++++|+++++ + +++++|++++
T Consensus 30 ~yld~~~~~~~~~~v~~a~~~~l~~~~--~~~~~~~~~~~~~--~~~~~-~l~~~la~~~g~~~~~--v-~~~~g~t~al 101 (416)
T 1qz9_A 30 IYLDGNSLGARPVAALARAQAVIAEEW--GNGLIRSWNSAGW--RDLSE-RLGNRLATLIGARDGE--V-VVTDTTSINL 101 (416)
T ss_dssp EECCTTTSCCCBTTHHHHHHHHHHTCC--CCCGGGHHHHTSG--GGHHH-HHHHHHHTTTTCCTTS--E-EECSCHHHHH
T ss_pred EeecCCCcCCCcHHHHHHHHHHHHHHH--hccCccccchhhH--HHHHH-HHHHHHHHHcCCCccc--E-EEeCChhHHH
Confidence 4444333 4578899999988886543 22211 111111 11222 3567899999997531 2 3445567788
Q ss_pred HHHHHHcc------CCCCEEE-EeCCCCCccccCcccccccccccc--ccccEEEecccCCCCCCCCHHHHHHHhhhcCC
Q 014724 182 FEVYTAIL------KPHDRIM-GLDLPHGGHLSHGFMTPKRRVSGT--SIYFESMPYRLDESTGLVDYDMLEKTAILFRP 252 (419)
Q Consensus 182 ~~~~~all------~pGD~Vl-~~~~~~~g~~s~~~~~~~~~i~~~--g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~p 252 (419)
..++.+++ +|||+|+ +..+.|+++..... ...... |. +++.++. +++|++.+++ ++
T Consensus 102 ~~al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~----~~~~~~~~g~--~~~~v~~--------~~~l~~~i~~-~~ 166 (416)
T 1qz9_A 102 FKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAE----GLADMLQQGY--TLRLVDS--------PEELPQAIDQ-DT 166 (416)
T ss_dssp HHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHH----HHHHHHCSSC--EEEEESS--------GGGHHHHCST-TE
T ss_pred HHHHHhhcccccccCCCCcEEEEcCCCCCchHHHHH----HHHHHhcCCc--eEEEeCc--------HHHHHHHhCC-Cc
Confidence 88888776 8999755 44456654421100 000111 43 4444332 7888888864 78
Q ss_pred eEEEEcCCCCC--CcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcC-CCCCe-eEEEE
Q 014724 253 KLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSL-RGPRG-GMIFF 326 (419)
Q Consensus 253 klIi~~~s~~p--~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l-~Gprg-G~i~~ 326 (419)
++|++++++|| ...|+++|.++|++||++||+|++|..|.. +.++. ++|++++|+||++ +|+++ |+++.
T Consensus 167 ~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~-----~~~~~~~~~d~~~~s~~K~l~~g~~~~g~l~~ 241 (416)
T 1qz9_A 167 AVVMLTHVNYKTGYMHDMQALTALSHECGALAIWDLAHSAGAV-----PVDLHQAGADYAIGCTYKYLNGGPGSQAFVWV 241 (416)
T ss_dssp EEEEEESBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTS-----CCCHHHHTCSEEEECSSSTTCCCTTCCCEEEE
T ss_pred eEEEEeccccCcccccCHHHHHHHHHHcCCEEEEEccccccCc-----CCChhhcCCCEEEecCcccCCCCCCCeEEEEE
Confidence 99999988886 467899999999999999999999875532 11222 5899999999997 67888 99999
Q ss_pred eCCCcchhhHHHHhhhccc----------------------CCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHH
Q 014724 327 KKDPVLGVELESAINNAVF----------------------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCR 384 (419)
Q Consensus 327 ~~~~~~~~~l~~~i~~~~~----------------------~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~ 384 (419)
+++ +.+.+..... ....++++...++++..+++.....++++..+++.++++
T Consensus 242 ~~~------~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~ 315 (416)
T 1qz9_A 242 SPQ------LCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTD 315 (416)
T ss_dssp CTT------TTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHH
T ss_pred CHH------HHhccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 874 3232322100 011235566666666667877654567888999999999
Q ss_pred HHHHHHHhC----CcEEecCC---CcceeEEEEeC
Q 014724 385 ALASRLVEL----GYKLVSGG---SDNHLVLVDLR 412 (419)
Q Consensus 385 ~l~~~L~~~----G~~v~~~~---t~~hlv~vd~~ 412 (419)
++.+.|++. |+++.... ...+++++++.
T Consensus 316 ~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 350 (416)
T 1qz9_A 316 LFIELVEQRCAAHELTLVTPREHAKRGSHVSFEHP 350 (416)
T ss_dssp HHHHHHHHHHTTSCCEECSCSSGGGBCSEEEEECT
T ss_pred HHHHHHHhhccCCCeEEeCCCCHHHcCCEEEEecC
Confidence 999999886 89887532 13567888764
No 117
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.86 E-value=6.7e-20 Score=188.89 Aligned_cols=252 Identities=13% Similarity=0.008 Sum_probs=171.9
Q ss_pred hHHHHHHHHHHHHHHHHcCCCCCCC-------ceeEecCChHHHHHHHHHHccC-------------------CCCEEEE
Q 014724 144 EYIDELETLCQKRALAAFNLDENKW-------GVNVQPLSGSPANFEVYTAILK-------------------PHDRIMG 197 (419)
Q Consensus 144 ~~~~~lE~~~~~~la~~~g~~~~~~-------~v~V~~~sGt~A~~~~~~all~-------------------pGD~Vl~ 197 (419)
+...++|+.+.+|+++++|++...+ +..+++++||+||+.++.+..+ |++.|++
T Consensus 114 p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~v~~ 193 (481)
T 4e1o_A 114 PACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESSLNARLVAYA 193 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHTTEEEEE
T ss_pred cHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHHHhhhcCcccccccccCCeEEEE
Confidence 5567899999999999999986320 1236778889999988876632 5789999
Q ss_pred eCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcC-----CeEEEEcCCCC--CCcCChHH
Q 014724 198 LDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFR-----PKLIIAGASAY--PRDFDYPR 270 (419)
Q Consensus 198 ~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~-----pklIi~~~s~~--p~~~dl~~ 270 (419)
....|.++. +.+.+.|. +++.++++ +++.+|+++|++++++.+ |++|++..+++ +...|+++
T Consensus 194 s~~~H~s~~--------~~~~~~g~--~~~~v~~~-~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~l~~ 262 (481)
T 4e1o_A 194 SDQAHSSVE--------KAGLISLV--KMKFLPVD-DNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCLSE 262 (481)
T ss_dssp ETTSCHHHH--------HHHHHHTC--EEEEECCC-TTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHH
T ss_pred cCcchHHHH--------HHHHhCCC--ceEEEEcC-CCCcCCHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCCHHH
Confidence 988776543 22334555 44555555 478999999999997532 66666654443 46789999
Q ss_pred HHHHHHHhCCEEEEeccccccccccCCcCCCC---CCCcEEEeCCCCcCCCCCe-eEEEEeCCCcchhhHHHH-hhh---
Q 014724 271 MRQIADAVGALLMMDMAHISGLVAASVVADPF---KYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESA-INN--- 342 (419)
Q Consensus 271 I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~---~~~Div~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~-i~~--- 342 (419)
|+++|++||+++++|+||..+..........+ +.+|++++++||+|.+|.+ |+++.+++ ++..+ +..
T Consensus 263 I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~g~g~l~~~~~-----~~l~~~~~~~~~ 337 (481)
T 4e1o_A 263 LGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHFDCTGFWVKDK-----YKLQQTFSVNPI 337 (481)
T ss_dssp HHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESBH-----HHHHTTTCCCCG
T ss_pred HHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCCCCceEEEEEeCH-----HHHHHHhcCCch
Confidence 99999999999999999876643322211112 2469999999999988866 77777764 33221 110
Q ss_pred cccC------------CCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEEecCCCcceeEEE
Q 014724 343 AVFP------------GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLVLV 409 (419)
Q Consensus 343 ~~~~------------~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~~~~t~~hlv~v 409 (419)
+.+. ..+++.... ..++..+++.+..++++++.++..++++++++.|++. ||+++. ....+++++
T Consensus 338 yl~~~~~~~~~~~~~~~~~~~r~~~-~l~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~-~~~~~~v~f 415 (481)
T 4e1o_A 338 YLRHANSGVATDFMHWQIPLSRRFR-SVKLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVRNDPSFEIPA-KRHLGLVVF 415 (481)
T ss_dssp GGCCTTTTTSCCGGGGSSSSCCCCT-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEECCS-CCCSSEEEE
T ss_pred hccCcccCCCCCcccccccCCCCcc-HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec-CCceeEEEE
Confidence 0000 111221111 2233445555444567888999999999999999997 999875 346788888
Q ss_pred EeCC
Q 014724 410 DLRP 413 (419)
Q Consensus 410 d~~~ 413 (419)
++.+
T Consensus 416 ~~~~ 419 (481)
T 4e1o_A 416 RLKG 419 (481)
T ss_dssp EESS
T ss_pred EeCC
Confidence 8854
No 118
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.86 E-value=1.9e-20 Score=189.30 Aligned_cols=265 Identities=17% Similarity=0.219 Sum_probs=177.2
Q ss_pred ccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHH
Q 014724 107 LIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEV 184 (419)
Q Consensus 107 L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~ 184 (419)
|..+++. .|+.+++++.+.+... .|+. ......+++ +.+++++|.+. + +++++|++|+.++
T Consensus 21 l~~~~p~~~~p~~~~~a~~~~~~~~---~y~~-----~~~~~~~l~----~~la~~~~~~~----v-~~~~ggt~al~~~ 83 (424)
T 2po3_A 21 LLVGRPNRIDRARLYERLDRALDSQ---WLSN-----GGPLVREFE----ERVAGLAGVRH----A-VATCNATAGLQLL 83 (424)
T ss_dssp EETTCCCCCCHHHHHHHHHHHHHHT---CCSS-----SCHHHHHHH----HHHHHHHTSSE----E-EEESCHHHHHHHH
T ss_pred ccccCCCCCChHHHHHHHHHHHhcC---Cccc-----CCHHHHHHH----HHHHHHhCCCe----E-EEeCCHHHHHHHH
Confidence 4444433 4678999988877532 1221 023334554 66788888753 3 6667788999999
Q ss_pred HHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC
Q 014724 185 YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR 264 (419)
Q Consensus 185 ~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~ 264 (419)
+.++. +||+|++++++|.++.. .+...|. +++.++++++++.+|+++|++.+++ ++++|++++ .++.
T Consensus 84 l~~l~-~gd~Vlv~~~~~~~~~~--------~~~~~G~--~~~~v~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~-~tG~ 150 (424)
T 2po3_A 84 AHAAG-LTGEVIMPSMTFAATPH--------ALRWIGL--TPVFADIDPDTGNLDPDQVAAAVTP-RTSAVVGVH-LWGR 150 (424)
T ss_dssp HHHHT-CCSEEEEESSSCTHHHH--------HHHHTTC--EEEEECBCTTTSSBCHHHHGGGCCT-TEEEEEEEC-GGGC
T ss_pred HHHcC-CCCEEEECCCccHHHHH--------HHHHcCC--EEEEEecCCCcCCcCHHHHHHhhCc-CCcEEEEEC-CCCC
Confidence 99885 89999999998877642 2334555 5555666655678999999998875 789888765 3455
Q ss_pred cCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC-CCcEEEeCCC--CcCCCCCeeEEEEeCCCcchhhHHHHhh
Q 014724 265 DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTH--KSLRGPRGGMIFFKKDPVLGVELESAIN 341 (419)
Q Consensus 265 ~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~-~~Div~~S~h--K~l~GprgG~i~~~~~~~~~~~l~~~i~ 341 (419)
..++++|.++|+++|++||+|++|..|..+.+. ++. ..|++++|+| |+++|+++|+++.+++ ++.+.+.
T Consensus 151 ~~~l~~i~~la~~~~~~li~Dea~~~g~~~~~~---~~~~~~di~~~S~sk~K~l~~~~~G~~v~~~~-----~l~~~l~ 222 (424)
T 2po3_A 151 PCAADQLRKVADEHGLRLYFDAAHALGCAVDGR---PAGSLGDAEVFSFHATKAVNAFEGGAVVTDDA-----DLAARIR 222 (424)
T ss_dssp CCCHHHHHHHHHHTTCEEEEECTTCTTCEETTE---ETTSSSSEEEEECCTTSSSCCSSCEEEEESCH-----HHHHHHH
T ss_pred cCCHHHHHHHHHHcCCEEEEECccccCCeECCe---ecccccCEEEEeCCCCCCccCCCCeEEEeCCH-----HHHHHHH
Confidence 689999999999999999999998777664432 222 4689999988 8888889999999843 5655554
Q ss_pred hcccCCCC--------CCC-hHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEEec--CCCc--ceeE
Q 014724 342 NAVFPGLQ--------GGP-HNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVS--GGSD--NHLV 407 (419)
Q Consensus 342 ~~~~~~~~--------g~p-~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~~--~~t~--~hlv 407 (419)
.....+.. |.+ ....+++ +.++... ..++++.++..++++++.+.|.+. |+++.. .++. .+++
T Consensus 223 ~~~~~~~~~~~~~~~~g~~~~~~~~~a-a~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~ 299 (424)
T 2po3_A 223 ALHNFGFDLPGGSPAGGTNAKMSEAAA-AMGLTSL--DAFPEVIDRNRRNHAAYREHLADLPGVLVADHDRHGLNNHQYV 299 (424)
T ss_dssp HHHBTTTTCTTCCTTCCCBCCCCHHHH-HHHHHHH--HHHHHHHHHHHHHHHHHHHHTCSCTTEEECCGGGGSCCCCCCE
T ss_pred HHHhcCccccccccccCcCCCcCHHHH-HHHHHHH--HHHHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCccccEEE
Confidence 32221111 111 1111221 2233322 345778888889999999999886 888764 1222 2566
Q ss_pred EEEeC
Q 014724 408 LVDLR 412 (419)
Q Consensus 408 ~vd~~ 412 (419)
++++.
T Consensus 300 ~i~~~ 304 (424)
T 2po3_A 300 IVEID 304 (424)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 67764
No 119
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.85 E-value=1.1e-20 Score=188.90 Aligned_cols=298 Identities=15% Similarity=0.052 Sum_probs=184.3
Q ss_pred hccccccChhHHHHHHHHHHHhhhcccccccC-CC---ChHHHHHHHhhhhhccC--CCCCCCCCCCCchhHHHHHHHHH
Q 014724 80 DYSLGEADPEVCEIITKEKERQFKSLELIASE-NF---TSRAVMEAVGSCLTNKY--SEGLPGKRYYGGNEYIDELETLC 153 (419)
Q Consensus 80 ~~~l~~~~~~~~~~~~~e~~r~~~~i~L~~se-n~---~~~~V~eal~~~l~~~y--~~g~p~~r~~~g~~~~~~lE~~~ 153 (419)
+++...+.+..+..+... ...++.|+|..+. ++ .++.+++++.+.+.... ..+|+.. .| ..+++
T Consensus 11 ~~~~~~~~~~~~~~~~~~-~~~~~~i~l~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~---~~---~~~l~--- 80 (397)
T 2zyj_A 11 GKGAGRIQASTIRELLKL-TQRPGILSFAGGLPAPELFPKEEAAEAAARILREKGEVALQYSPT---EG---YAPLR--- 80 (397)
T ss_dssp CGGGGGCCCCHHHHHHHH-HTSTTCEEESSCCCCGGGCCHHHHHHHHHHHHHHHHHHHTSCCCT---TC---CHHHH---
T ss_pred hhhhcccCchHHHHHHhh-ccCCCceecCCCCCCchhCCHHHHHHHHHHHHHhcchhhhCCCCC---CC---CHHHH---
Confidence 344444555433322222 1134567786553 22 57889999887765311 1133321 12 12444
Q ss_pred HHHHHHHcCCCCCCCceeEecCCh-HHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccC
Q 014724 154 QKRALAAFNLDENKWGVNVQPLSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD 232 (419)
Q Consensus 154 ~~~la~~~g~~~~~~~v~V~~~sG-t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~ 232 (419)
+.+++++|++++ +|++++| ++|+..++.++++|||+|++.+|.|.++.. .+...|. +++.++.+
T Consensus 81 -~~la~~~g~~~~----~v~~~~g~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~--------~~~~~g~--~~~~~~~~ 145 (397)
T 2zyj_A 81 -AFVAEWIGVRPE----EVLITTGSQQALDLVGKVFLDEGSPVLLEAPSYMGAIQ--------AFRLQGP--RFLTVPAG 145 (397)
T ss_dssp -HHHHHHHTSCGG----GEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHH--------HHHTTCC--EEEEEEEE
T ss_pred -HHHHHHhCCChh----hEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHH--------HHHHcCC--EEEecCcC
Confidence 566777787653 3555655 679999999999999999999998876531 2234455 44444454
Q ss_pred CCCCCCCHHHHHHHhhhcCCeEE-EEcCCCCCC--cCC---hHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--C
Q 014724 233 ESTGLVDYDMLEKTAILFRPKLI-IAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--Y 304 (419)
Q Consensus 233 ~~~~~iD~d~Le~~l~~~~pklI-i~~~s~~p~--~~d---l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~ 304 (419)
+ ++ +|+++|++.+++.++++| ++++++||+ ..+ +++|+++|++||++||+|++|.. +...+..+.++. +
T Consensus 146 ~-~~-~d~~~l~~~l~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~-~~~~g~~~~~~~~~~ 222 (397)
T 2zyj_A 146 E-EG-PDLDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRE-LYFGEARLPSLFELA 222 (397)
T ss_dssp T-TE-ECHHHHHHHHHHCCCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTT-CBCSSCCCCCHHHHH
T ss_pred C-CC-CCHHHHHHHHhhcCCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCccc-ccCCCCCCCchhhhC
Confidence 3 33 999999999976578887 467778874 344 55899999999999999999754 333332111121 1
Q ss_pred C------cEEEeCCCCcCC-CCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHH
Q 014724 305 C------DVVTTTTHKSLR-GPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQN 377 (419)
Q Consensus 305 ~------Div~~S~hK~l~-GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~ 377 (419)
. .++++|+||+|. |.|.|++++++ ++.+.+.........+++.. ..+++..+++....+..++..+
T Consensus 223 ~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~------~~~~~l~~~~~~~~~~~~~~-~~~a~~~~l~~~~~~~~~~~~~ 295 (397)
T 2zyj_A 223 REAGYPGVIYLGSFSKVLSPGLRVAFAVAHP------EALQKLVQAKQGADLHTPML-NQMLVHELLKEGFSERLERVRR 295 (397)
T ss_dssp HHHTCCCEEEEEESTTTTCGGGCCEEEECCH------HHHHHHHHHHHHHHSSCCHH-HHHHHHHHHTTTHHHHHHHHHH
T ss_pred cccCCCeEEEEecccccccccceeEEEecCH------HHHHHHHHHHHhhcCCCCHH-HHHHHHHHHHhCCHHHHHHHHH
Confidence 2 288999999984 56789999986 66666554322222223222 2333333443210023466777
Q ss_pred HHHHHHHHHHHHHHhC---CcEEecCCCcceeEEEEeCC
Q 014724 378 KVVSNCRALASRLVEL---GYKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 378 ~v~~n~~~l~~~L~~~---G~~v~~~~t~~hlv~vd~~~ 413 (419)
++.++++++.+.|++. |+++... ...+++|+++..
T Consensus 296 ~~~~~~~~l~~~L~~~~~~g~~~~~~-~~g~~~~~~~~~ 333 (397)
T 2zyj_A 296 VYREKAQAMLHALDREVPKEVRYTRP-KGGMFVWMELPK 333 (397)
T ss_dssp HHHHHHHHHHHHHHHHSCTTSEECCC-SBSSEEEEECST
T ss_pred HHHHHHHHHHHHHHHHCCCCeEEccC-CccEEEEEEcCC
Confidence 8888999999999875 7887542 345678998853
No 120
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.85 E-value=2.3e-20 Score=187.63 Aligned_cols=298 Identities=10% Similarity=0.052 Sum_probs=181.6
Q ss_pred cChhHHHHHHHHHHHh-----hhcccccccC------CC-ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHH
Q 014724 86 ADPEVCEIITKEKERQ-----FKSLELIASE------NF-TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLC 153 (419)
Q Consensus 86 ~~~~~~~~~~~e~~r~-----~~~i~L~~se------n~-~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~ 153 (419)
.+..++.+++..+... .+.|+|..++ ++ +++.|.+++....... ..+|+. ..|. .++++.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~Y~~---~~g~---~~lr~~l 88 (413)
T 3t18_A 16 GPDLAFDINNKANAAIEKYGREAVINAALGTLLDDKGKIIALPSVYDRLDEMDRSH-IASYAP---IEGE---KDYRKIV 88 (413)
T ss_dssp CCCHHHHHHHHHHHHHHHHCGGGCEECCSCCCBCTTSCBCCCHHHHHHHHHSCHHH-HHSCCC---TTCC---HHHHHHH
T ss_pred CCChHHHHHHHHhhhhhhccccceEeccccCccCCCCCcCChHHHHHHHHhcCccc-ccCcCC---CCCC---HHHHHHH
Confidence 4445666665533222 2567887664 33 6789999887643211 123332 1122 2555555
Q ss_pred HHHHHHHcCCCCCCCceeEecCC-hHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccC
Q 014724 154 QKRALAAFNLDENKWGVNVQPLS-GSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD 232 (419)
Q Consensus 154 ~~~la~~~g~~~~~~~v~V~~~s-Gt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~ 232 (419)
.+++....+.+.. .++++++ |++|+..++.++++|||+|++++|.|.++.. .+...|. +++.++++
T Consensus 89 a~~~~~~~~~~~~---~~i~~t~g~~~al~~~~~~~~~~gd~Vl~~~p~~~~~~~--------~~~~~g~--~~~~~~~~ 155 (413)
T 3t18_A 89 IDTLFGPYKPEGY---ISAIATPGGTGAIRSAIFSYLDEGDPLICHDYYWAPYRK--------ICEEFGR--NFKTFEFF 155 (413)
T ss_dssp HHHHHGGGCCSSE---EEEEEESHHHHHHHHHHHHHCCSSCEEEEESSCCTHHHH--------HHHHHTC--EEEEECCB
T ss_pred HHHHhcccCcccc---CcEEEcCccHHHHHHHHHHhcCCCCEEEECCCCcccHHH--------HHHHhCC--eEEEeecc
Confidence 5666555554321 1344554 5789999999999999999999998876542 2234555 45555553
Q ss_pred CCCCCCCHHHHHHHhhhc---CCe-EEEEcCC-CCCC--cCCh---HHHHHHHH------HhCCEEEEeccccccccccC
Q 014724 233 ESTGLVDYDMLEKTAILF---RPK-LIIAGAS-AYPR--DFDY---PRMRQIAD------AVGALLMMDMAHISGLVAAS 296 (419)
Q Consensus 233 ~~~~~iD~d~Le~~l~~~---~pk-lIi~~~s-~~p~--~~dl---~~I~~ia~------~~ga~livD~ah~~Gl~~~g 296 (419)
++++.+|+++|++.+++. +++ ++++++| +||+ ..+. ++|+++|+ +||++||+|++| .++.+.+
T Consensus 156 ~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y-~~~~~~~ 234 (413)
T 3t18_A 156 TDDFAFNIDVYKEAIDEGIRDSDRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAY-LEFAGDG 234 (413)
T ss_dssp CTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTT-GGGSSSS
T ss_pred CCCCCcCHHHHHHHHHHHhhcCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEeccc-ccccCCh
Confidence 345789999999998753 677 7888888 8885 4454 55666666 899999999996 5666544
Q ss_pred CcCCCC----C--CCc---EEEeCCCCcC--CCCCeeEEEE---eCCCcchhhHHHHhhhcccCC---CCCCChHHHHHH
Q 014724 297 VVADPF----K--YCD---VVTTTTHKSL--RGPRGGMIFF---KKDPVLGVELESAINNAVFPG---LQGGPHNHTIGG 359 (419)
Q Consensus 297 ~~~~~~----~--~~D---iv~~S~hK~l--~GprgG~i~~---~~~~~~~~~l~~~i~~~~~~~---~~g~p~~~~iaa 359 (419)
....++ + ..+ ++++|+||+| +|+|.|++++ ++ ++.+.+....... ..++++....++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~riG~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~a 308 (413)
T 3t18_A 235 DQQRKFFEKFSNLPRNLFVVVAFSMSKSHTAYGLRSGAAVGISSSK------EIIEEFEASLAHSARCNWSNGTHAAQNI 308 (413)
T ss_dssp STTTGGGGGGTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEEESCH------HHHHHHHHHHHHHHHHHTSSCCHHHHHH
T ss_pred hhHHHHHHHHhhcCCCeeEEEEEecCccCCCcCcCcEEEEEecCCH------HHHHHHHHHHHHhhhccccCCChHHHHH
Confidence 311111 1 123 7789999987 5788899998 54 5665554321100 011122222333
Q ss_pred HHHHHHHh----cChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeEEEEe
Q 014724 360 LAVCLKHA----QSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDL 411 (419)
Q Consensus 360 la~al~~~----~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~vd~ 411 (419)
+..++... ...+.+++.+++.++++++.+.|++.|+++..+ ..+.++|+++
T Consensus 309 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~-~~~~~~~~~~ 363 (413)
T 3t18_A 309 LIELERAENKKIYEQELVDLRNMLKSRADVFVTAAKENKLTMIPY-FGGFFTFIPT 363 (413)
T ss_dssp HHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCBCC-CSSSCEEEEC
T ss_pred HHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccCC-CceEEEEeCC
Confidence 33233221 011234566778888999999999999887653 3345677776
No 121
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.85 E-value=1.8e-20 Score=186.93 Aligned_cols=259 Identities=18% Similarity=0.123 Sum_probs=164.6
Q ss_pred hccccccc--CCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHH
Q 014724 103 KSLELIAS--ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 180 (419)
Q Consensus 103 ~~i~L~~s--en~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A 180 (419)
+.+++..+ ...++++|++++. .| + +. ..+++.+++.+++++|.+..+ ..+++++|++|
T Consensus 29 ~v~~~~~~~~~~~~~~~v~~a~~-----~~--~--------~~---~~~~~~~~~~~a~~~g~~~~~--~~~~~~ggt~a 88 (374)
T 2aeu_A 29 ALYDLSGLSGGFLIDEKDKALLN-----TY--I--------GS---SYFAEKVNEYGLKHLGGDEND--KCVGFNRTSSA 88 (374)
T ss_dssp GCEECSSCCCCCCCCHHHHHHHT-----ST--T--------HH---HHHHHHHHHHHHHHHTCCTTE--EEEEESSHHHH
T ss_pred ceeeecccCCCCCCCHHHHHHHH-----Hh--c--------Cc---hHHHHHHHHHHHHHhCCCCcc--eEEEEcChHHH
Confidence 45666654 3568999999985 12 1 11 134445667778889984211 23677888999
Q ss_pred HHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeE-EEEcC
Q 014724 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKL-IIAGA 259 (419)
Q Consensus 181 ~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pkl-Ii~~~ 259 (419)
+..++.++ |||+|++++|.|++|+... ..+...|. +++.+ .|++++++. . .++|+ |++++
T Consensus 89 ~~~~~~~~--~gd~Vl~~~~~y~~~~~~~-----~~~~~~g~--~~~~v--------~d~~~l~~~-~-~~~~~~v~~~~ 149 (374)
T 2aeu_A 89 ILATILAL--KPKKVIHYLPELPGHPSIE-----RSCKIVNA--KYFES--------DKVGEILNK-I-DKDTLVIITGS 149 (374)
T ss_dssp HHHHHHHH--CCSEEEEECSSSSCCTHHH-----HHHHHTTC--EEEEE--------SCHHHHHTT-C-CTTEEEEEECB
T ss_pred HHHHHHhC--CCCEEEEecCCCCccHHHH-----HHHHHcCc--EEEEe--------CCHHHHHhc-C-CCccEEEEEcc
Confidence 99999988 9999999999887765311 01223454 44443 388999887 4 57899 99998
Q ss_pred CCCCC---cCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC-CCcEEEeCCCCcCCCCCeeEEEEeCCCcchhh
Q 014724 260 SAYPR---DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVE 335 (419)
Q Consensus 260 s~~p~---~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~-~~Div~~S~hK~l~GprgG~i~~~~~~~~~~~ 335 (419)
|+||+ ..++++|.++|++||++||+|++|..+........+++. +.|++++|+||+++||++|++++++ +
T Consensus 150 p~nptG~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~di~~~S~sK~l~g~~~G~~~~~~------~ 223 (374)
T 2aeu_A 150 TMDLKVIELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPALKLGADLVVTSTDKLMEGPRGGLLAGKK------E 223 (374)
T ss_dssp CTTSCBCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHHHHTCSEEEEETTSSSSSCSCEEEEEEH------H
T ss_pred CCCCCCCCcccHHHHHHHHHHcCCEEEEECCcccccccccccCCccccCCcEEEecCcccccCcceEEEEECH------H
Confidence 98885 468999999999999999999997655310110011222 6799999999999999999999987 6
Q ss_pred HHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHH--------HHHHHHHh----CCcEEecCCCc
Q 014724 336 LESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCR--------ALASRLVE----LGYKLVSGGSD 403 (419)
Q Consensus 336 l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~--------~l~~~L~~----~G~~v~~~~t~ 403 (419)
+.+.+....... .++++....+++..++.... . +..+++.++++ .|.+.|.+ .|+.+...++.
T Consensus 224 ~~~~l~~~~~~~-~~~~~~~~~~a~~~al~~~~-~---~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g 298 (374)
T 2aeu_A 224 LVDKIYIEGTKF-GLEAQPPLLAGIYRALKNFN-L---ERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPTG 298 (374)
T ss_dssp HHHHHHHHHHTT-TCBCCHHHHHHHHHHHHHCC-H---HHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSSE
T ss_pred HHHHHHHhhccc-cCCCCHHHHHHHHHHHHHHh-H---HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcceeeCCce
Confidence 766665433222 12233334444445665542 1 12333444444 44444444 25665443344
Q ss_pred ceeEEEEe
Q 014724 404 NHLVLVDL 411 (419)
Q Consensus 404 ~hlv~vd~ 411 (419)
..+.|++.
T Consensus 299 ~~~~~~~~ 306 (374)
T 2aeu_A 299 FVIKRVYK 306 (374)
T ss_dssp EEEEEEES
T ss_pred EEEEeecc
Confidence 44455554
No 122
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.85 E-value=1.5e-19 Score=180.48 Aligned_cols=262 Identities=15% Similarity=0.129 Sum_probs=174.1
Q ss_pred ccccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHH
Q 014724 107 LIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYT 186 (419)
Q Consensus 107 L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~ 186 (419)
+-.+...+++++++++.+.+...+ | +. .+...++| +.+++++|.+. .++++||++|+..++.
T Consensus 6 ~~~~~~~~~~~~~~a~~~~~~~~~---~-----~~-~~~~~~l~----~~la~~~~~~~-----~i~~~sGt~a~~~al~ 67 (390)
T 3b8x_A 6 YPLASSTWDDLEYKAIQSVLDSKM---F-----TM-GEYVKQYE----TQFAKTFGSKY-----AVMVSSGSTANLLMIA 67 (390)
T ss_dssp BCSCCCCCCHHHHHHHHHHHHHTC---C-----SS-CHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHH
T ss_pred ccCCCCCCCHHHHHHHHHHHHcCC---C-----CC-ChHHHHHH----HHHHHHHCCCc-----EEEECCHHHHHHHHHH
Confidence 334566789999999988875421 1 11 23334444 67888888863 3788999999999999
Q ss_pred Hc-------cCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcC
Q 014724 187 AI-------LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 259 (419)
Q Consensus 187 al-------l~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~ 259 (419)
++ +++||+|+++.++|.++.. .+...|. +++.++++++++.+|+++|++.+++ ++++|++.+
T Consensus 68 ~~~~~~~~~~~~g~~Vi~~~~~~~~~~~--------~~~~~g~--~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~ 136 (390)
T 3b8x_A 68 ALFFTKKPRLKKGDEIIVPAVSWSTTYY--------PLQQYGL--RVKFVDIDINTLNIDIESLKEAVTD-STKAILTVN 136 (390)
T ss_dssp HTTSSSSCSCCTTCEEEEESSSCHHHHH--------HHHHTTC--EEEEECBCTTTCSBCHHHHHHHCCT-TEEEEEEEC
T ss_pred HHHhhhhcCCCCcCEEEECCCCcHHHHH--------HHHHcCC--EEEEEecCccccCcCHHHHHHHhCc-CCeEEEEEC
Confidence 98 8899999999998877642 2234454 5556666655689999999999975 788888764
Q ss_pred CCCCCcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC-CCcEEEeC--CCCcCCCCCeeEEEEeCCCcchhhH
Q 014724 260 SAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTT--THKSLRGPRGGMIFFKKDPVLGVEL 336 (419)
Q Consensus 260 s~~p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~-~~Div~~S--~hK~l~GprgG~i~~~~~~~~~~~l 336 (419)
..+...|+++|.++|+++|++||+|++|..|....+. .+. ..|+.++| .+|.+.+++||+++++++ ++
T Consensus 137 -~~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~---~~g~~~~~~~~s~~~~k~~~~g~gG~~~~~~~-----~l 207 (390)
T 3b8x_A 137 -LLGNPNNFDEINKIIGGRDIILLEDNCESMGATFNNK---CAGTFGLMGTFSSFYSNHIATMEGGCIVTDDE-----EI 207 (390)
T ss_dssp -GGGCCCCHHHHHHHHTTSCCEEEEECTTCTTCEETTE---ETTSSSSEEEEECCTTSSSCSSSCEEEEESCH-----HH
T ss_pred -CccChhhHHHHHHHHHHcCCEEEEECcCcccCEECCc---ccccccceEEEEccCCCCCccCCceEEEeCCH-----HH
Confidence 1233479999999999999999999999877654321 111 23655544 345576678899998873 44
Q ss_pred HHHhhhcccCC--------------------------C-CC----CChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHH
Q 014724 337 ESAINNAVFPG--------------------------L-QG----GPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRA 385 (419)
Q Consensus 337 ~~~i~~~~~~~--------------------------~-~g----~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~ 385 (419)
.+++......+ . .| .+.. .+++ ++..+ +.+++..++..+++++
T Consensus 208 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--~aa~--~l~~l--~~l~~~~~~~~~~~~~ 281 (390)
T 3b8x_A 208 YHILLCIRAHGWTRNLPKKNKVTGVKSDDQFEESFKFVLPGYNVRPLEM--SGAI--GIEQL--KKLPRFISVRRKNAEY 281 (390)
T ss_dssp HHHHHHHTBTTBSTTSCSEETTTEECCSCTTTSSSCBCSCCCBCCCCHH--HHHH--HHHHH--HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCccccccccccccccccccccccceeccccccCcCHH--HHHH--HHHHH--HHHHHHHHHHHHHHHH
Confidence 44332211100 0 11 2222 2222 22222 3456778888999999
Q ss_pred HHHHHHhC-CcEEecCC--CcceeEEEEeC
Q 014724 386 LASRLVEL-GYKLVSGG--SDNHLVLVDLR 412 (419)
Q Consensus 386 l~~~L~~~-G~~v~~~~--t~~hlv~vd~~ 412 (419)
+.+.|++. |+++.... +..++++|.+.
T Consensus 282 l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~ 311 (390)
T 3b8x_A 282 FLDKFKDHPYLDVQQETGESSWFGFSFIIK 311 (390)
T ss_dssp HHHHHTTCSSEEECCCCSBCCCCEEEEEEC
T ss_pred HHHHhcCCCCcccCCCCCCcccEEEEEEec
Confidence 99999986 88776422 23345666665
No 123
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.85 E-value=9.9e-20 Score=187.20 Aligned_cols=268 Identities=16% Similarity=0.124 Sum_probs=172.8
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHc----c
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI----L 189 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~al----l 189 (419)
..|.+.+++.+.+. .|. .|.. ... .....++++.+++++++++|++. +.+++++|++|+..++.++ .
T Consensus 78 ~~p~v~~~~~~~~~-~~~-~~~~--~~~-~~g~~~l~~~l~~~la~~~g~~~----~~~~~~ggt~a~~~al~~~~~~~~ 148 (474)
T 1wyu_B 78 YNPKLHEEAARLFA-DLH-PYQD--PRT-AQGALRLMWELGEYLKALTGMDA----ITLEPAAGAHGELTGILIIRAYHE 148 (474)
T ss_dssp CCCHHHHHHHHTTS-SCC-TTSC--GGG-CHHHHHHHHHHHHHHHHHHTCSE----EECCCSSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH-hcC-CCCc--hhh-ChHHHHHHHHHHHHHHHHHCCCc----eeecChHHHHHHHHHHHHHHHHHH
Confidence 34677777766532 231 1211 000 12234666678899999999876 3345577888998766554 4
Q ss_pred CCCC-----EEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC-C
Q 014724 190 KPHD-----RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY-P 263 (419)
Q Consensus 190 ~pGD-----~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~-p 263 (419)
++|| +|+++++.|+++.. .+...|. +++.++++ +++.+|+++|++.+.+ ++++|++++|++ +
T Consensus 149 ~~Gd~~~r~~Vlv~~~~h~~~~~--------~~~~~G~--~vv~v~~~-~~~~~d~~~L~~~i~~-~t~~v~~~~pn~~G 216 (474)
T 1wyu_B 149 DRGEGRTRRVVLVPDSAHGSNPA--------TASMAGY--QVREIPSG-PEGEVDLEALKRELGP-HVAALMLTNPNTLG 216 (474)
T ss_dssp HTTCTTTCCEEEEETTSCTHHHH--------HHHHTTC--EEEEECBC-TTSSBCHHHHHHHCST-TEEEEEECSSCTTS
T ss_pred hcCCccCCCEEEEeCCcChhhHH--------HHHHCCC--EEEEecCC-CCCCcCHHHHHHhhCC-CceEEEEECCCCCc
Confidence 6888 99999988876642 2345565 45555555 4688999999999974 789999888753 3
Q ss_pred Cc-CChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC-CCcEEEeCCCCcCCCC------CeeEEEEeCCCcchhh
Q 014724 264 RD-FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLRGP------RGGMIFFKKDPVLGVE 335 (419)
Q Consensus 264 ~~-~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~-~~Div~~S~hK~l~Gp------rgG~i~~~~~~~~~~~ 335 (419)
.. .|+++|+++|++||+++|+|++|..+... .. .+.+ ++|++++|+||+|.+| +.|++++++ +
T Consensus 217 ~~~~~l~~i~~l~~~~g~~li~Dea~~~~~~g--~~-~~~~~g~di~~~s~~K~~~~p~g~gG~~~G~~~~~~------~ 287 (474)
T 1wyu_B 217 LFERRILEISRLCKEAGVQLYYDGANLNAIMG--WA-RPGDMGFDVVHLNLHKTFTVPHGGGGPGSGPVGVKA------H 287 (474)
T ss_dssp CCCTTHHHHHHHHHHHTCEEEEEGGGGGGTTT--TC-CHHHHTCSEEECCTTTTTCCCCTTSCCCCCCEEECG------G
T ss_pred ccCCCHHHHHHHHHHcCCEEEEeCchhhhhcc--CC-CcccCCCcEEEEeCccccccCCCCCCCCeEEEEEcH------H
Confidence 34 58999999999999999999998655431 11 1112 6899999999998644 679999987 3
Q ss_pred HHHHhhhc-c------c------C-----CCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEE
Q 014724 336 LESAINNA-V------F------P-----GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKL 397 (419)
Q Consensus 336 l~~~i~~~-~------~------~-----~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v 397 (419)
+.+.+... . + + ...+.++...+++....+.....+++++..+++.++++++.+.|++.|+++
T Consensus 288 l~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~~~l~~~L~~~g~~~ 367 (474)
T 1wyu_B 288 LAPYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLKEKGYRV 367 (474)
T ss_dssp GGGGCCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCBC
T ss_pred HHHhCCCCeeeccCCeeEecccCcccCcccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcEe
Confidence 44443310 0 0 0 000112222222222233333234567778889999999999999989887
Q ss_pred ecCCCcceeEEEEe
Q 014724 398 VSGGSDNHLVLVDL 411 (419)
Q Consensus 398 ~~~~t~~hlv~vd~ 411 (419)
..++...|.+++++
T Consensus 368 ~~~~~~~~~~~~~~ 381 (474)
T 1wyu_B 368 PYDGPSMHEFVAQP 381 (474)
T ss_dssp SSCSSCCSCEEEBC
T ss_pred cCCCCcceEEEEEc
Confidence 44333445466676
No 124
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.85 E-value=3.6e-20 Score=191.78 Aligned_cols=283 Identities=12% Similarity=0.038 Sum_probs=180.1
Q ss_pred hhcccccccCCCChHHHHHHHhhhhhcc---CCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChH
Q 014724 102 FKSLELIASENFTSRAVMEAVGSCLTNK---YSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS 178 (419)
Q Consensus 102 ~~~i~L~~sen~~~~~V~eal~~~l~~~---y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt 178 (419)
...|++..+....|+.++++..+.+.+. ...+|+. ..| ..++++.+.+++.+.+|.+.+ .+..+++++|+
T Consensus 95 p~~i~~~~~~~~~p~~~~~~a~~~l~~~~~~~~~~Y~~---~~G---~~~lr~~ia~~~~~~~g~~~~-~~~i~~t~G~~ 167 (500)
T 3tcm_A 95 PDLLQREEIKTLFSADSISRAKQILAMIPGRATGAYSH---SQG---IHGLRDAIASGIASRDGFPAN-ADDIFLTDGAS 167 (500)
T ss_dssp GGGGGCTTHHHHSCHHHHHHHHHHHTTSTTSCSSSCCC---TTC---CHHHHHHHHHHHHHHHSSCCC-GGGEEEESSSH
T ss_pred cccccCCCCcccCCHHHHHHHHHHHHcCCCCcCCCcCC---CcC---hHHHHHHHHHHHHhhcCCCCC-cccEEEcCCHH
Confidence 3445554443346677777776666542 1123332 123 236776777778777775432 11224445568
Q ss_pred HHHHHHHHHcc-CCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCC-CCCCCHHHHHHHhhhc-----C
Q 014724 179 PANFEVYTAIL-KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILF-----R 251 (419)
Q Consensus 179 ~A~~~~~~all-~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~-~~~iD~d~Le~~l~~~-----~ 251 (419)
+|+..++.+++ ++||+|++++|.|.++.. .+...|. ++++++++++ ++.+|+++|++.+++. +
T Consensus 168 ~al~~~~~~l~~~~gd~Vlv~~p~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 237 (500)
T 3tcm_A 168 PGVHLMMQLLIRNEKDGILVPIPQYPLYSA--------SIALHGG--ALVPYYLNESTGWGLETSDVKKQLEDARSRGIN 237 (500)
T ss_dssp HHHHHHHHHHCCSTTEEEEEEESCCTHHHH--------HHHHTTC--EEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHcCCCCCEEEEeCCCcHhHHH--------HHHHcCC--EEEEEecccccCCCCCHHHHHHHHHHHHhcCCC
Confidence 89999999998 899999999999876642 2344565 4555555543 4689999999999763 6
Q ss_pred CeEEEEcCCCCCC--cC---ChHHHHHHHHHhCCEEEEeccccccccccCC-cCCC-------C---C-CCc-EEEeCCC
Q 014724 252 PKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASV-VADP-------F---K-YCD-VVTTTTH 313 (419)
Q Consensus 252 pklIi~~~s~~p~--~~---dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~-~~~~-------~---~-~~D-iv~~S~h 313 (419)
+|+|++.+|+||+ .. ++++|+++|++||+++++|++|. ++++.+. ...+ + . ..+ ++++|+|
T Consensus 238 ~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~-~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~S 316 (500)
T 3tcm_A 238 VRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQ-ENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVS 316 (500)
T ss_dssp EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTT-TCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESS
T ss_pred ceEEEEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCcc-ccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCC
Confidence 8899888999985 22 46788888999999999999964 3343221 1111 1 1 122 6788999
Q ss_pred CcC---CCCCeeEEEE---eCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHH----------HhcChHHHHHHH
Q 014724 314 KSL---RGPRGGMIFF---KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLK----------HAQSPEFKVYQN 377 (419)
Q Consensus 314 K~l---~GprgG~i~~---~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~----------~~~~~~~~~~~~ 377 (419)
|+| +|.|+|+++. ++ ++.+.+...... ..+++....++++.++. ... .+.+.+.+
T Consensus 317 K~~~g~~G~R~G~~~~~~~~~------~~~~~l~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~ 387 (500)
T 3tcm_A 317 KGYYGECGKRGGYFEITGFSA------PVREQIYKIASV--NLCSNITGQILASLVMNPPKASDESYASYK-AEKDGILA 387 (500)
T ss_dssp STTTCCGGGCCEEEEEESCCT------THHHHHHHHHHT--TCCCCHHHHHHHHHHHSCCCSSSTHHHHHH-HHHHHHHH
T ss_pred ccCCCCCccceEEEEEeCCCH------HHHHHHHHHHhc--ccCCCHHHHHHHHHHhcCccccchhHHHHH-HHHHHHHH
Confidence 998 4889999988 44 565555443221 12233333444443443 111 23456677
Q ss_pred HHHHHHHHHHHHHHhC-CcEEecCCCcceeEEEEeC
Q 014724 378 KVVSNCRALASRLVEL-GYKLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 378 ~v~~n~~~l~~~L~~~-G~~v~~~~t~~hlv~vd~~ 412 (419)
++.++++++.+.|++. |+++... ....++|++++
T Consensus 388 ~l~~~~~~l~~~L~~~~g~~~~~~-~g~~~~~~~~~ 422 (500)
T 3tcm_A 388 SLARRAKALEHAFNKLEGITCNEA-EGAMYVFPQIC 422 (500)
T ss_dssp HHHHHHHHHHHHHHTSTTEECCCC-CBTTEECCEEC
T ss_pred HHHHHHHHHHHHHhcCCCcEEecC-CeEEEEeeeec
Confidence 8889999999999997 9988753 33445665553
No 125
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.85 E-value=2.6e-21 Score=197.96 Aligned_cols=241 Identities=13% Similarity=0.109 Sum_probs=167.1
Q ss_pred HHHHHHHHHcCCCCCCCceeEecCC-hHHHHHHHHHHccCCCCE---EEEeCCCCCccccCccccccccccccccccE--
Q 014724 152 LCQKRALAAFNLDENKWGVNVQPLS-GSPANFEVYTAILKPHDR---IMGLDLPHGGHLSHGFMTPKRRVSGTSIYFE-- 225 (419)
Q Consensus 152 ~~~~~la~~~g~~~~~~~v~V~~~s-Gt~A~~~~~~all~pGD~---Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~-- 225 (419)
.+++++++++|++++ +|++++ ++++++.++.++++|||. |++.+++|.+... .+. ..+...|..+.
T Consensus 115 ~l~~~la~~~g~~~~----~v~~t~g~t~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~-~~~---~~~~~~G~~~~~~ 186 (465)
T 3e9k_A 115 SIVGLMKDIVGANEK----EIALMNALTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHY-AIE---SQLQLHGLNIEES 186 (465)
T ss_dssp HHHGGGHHHHTCCGG----GEEECSCHHHHHHHHHHHHCCCCSSSCEEEEETTCCHHHHH-HHH---HHHHHTTCCHHHH
T ss_pred HHHHHHHHHcCCCcC----CEEEECCHHHHHHHHHHHhccccCCCCEEEEcCCcCCchHH-HHH---HHHHHcCCcceee
Confidence 456889999999864 244554 577999999999877665 9999998876431 110 01223444321
Q ss_pred -EEecccCCCCCCCCHHHHHHHhhh--cCCeEEEEcCCCCC--CcCChHHHHHHHHHhCCEEEEeccccccccccCCcCC
Q 014724 226 -SMPYRLDESTGLVDYDMLEKTAIL--FRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD 300 (419)
Q Consensus 226 -~v~~~~~~~~~~iD~d~Le~~l~~--~~pklIi~~~s~~p--~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~ 300 (419)
+...+.+ +++.+|+++|++.+++ .++++|++++++|+ ...|+++|.++|++||+++++|++|..|.. +.
T Consensus 187 ~v~~~~~~-~~~~~d~~~l~~~i~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a~~~g~~-----~~ 260 (465)
T 3e9k_A 187 MRMIKPRE-GEETLRIEDILEVIEKEGDSIAVILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHAVGNV-----EL 260 (465)
T ss_dssp EEEECCCT-TCSSCCHHHHHHHHHHHGGGEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTS-----CC
T ss_pred eEEEecCC-CCCccCHHHHHHHHHhcCCCeEEEEEeCcccCcceeecHHHHHHHHHHcCCEEEEEhhhhcCCc-----CC
Confidence 1111222 4678999999999974 36889999998887 467999999999999999999999987643 22
Q ss_pred CCC--CCcEEEeCCCCcC-CCCCe-eEEEEeCCCcchhhHHHHhhhcc-----------------cC-------CCCCCC
Q 014724 301 PFK--YCDVVTTTTHKSL-RGPRG-GMIFFKKDPVLGVELESAINNAV-----------------FP-------GLQGGP 352 (419)
Q Consensus 301 ~~~--~~Div~~S~hK~l-~Gprg-G~i~~~~~~~~~~~l~~~i~~~~-----------------~~-------~~~g~p 352 (419)
.+. ++|++++|+||++ .||.+ |+++.+++ +.+.+.... +. ...|+|
T Consensus 261 ~~~~~~~D~~~~s~~K~l~~gp~~~g~l~~~~~------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 334 (465)
T 3e9k_A 261 YLHDWGVDFACWCSYKYLNAGAGGIAGAFIHEK------HAHTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNP 334 (465)
T ss_dssp CHHHHTCCEEEECSSSTTCCCTTCCCEEEECGG------GTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCC
T ss_pred chhhcCCCEEEECcccccccCCCceEEEEEcHH------HHhhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCc
Confidence 222 7899999999999 58876 88888774 222111000 00 112467
Q ss_pred hHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHh-----------CCcEEecCCC---cceeEEEEeC
Q 014724 353 HNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-----------LGYKLVSGGS---DNHLVLVDLR 412 (419)
Q Consensus 353 ~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~-----------~G~~v~~~~t---~~hlv~vd~~ 412 (419)
+...++++..++..+...++++..++..++++++.+.|++ .|++++.... ...++++++.
T Consensus 335 ~~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~~ 408 (465)
T 3e9k_A 335 PILLVCSLHASLEIFKQATMKALRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNIITPSHVEERGCQLTITFS 408 (465)
T ss_dssp CHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC---------CEEECSCSSGGGBCSCEEEEEC
T ss_pred cHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCeEEeCCCCHhhcccEEEEEec
Confidence 7777777777777665434688889999999999999988 6888875321 1456777765
No 126
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.85 E-value=6.3e-21 Score=187.65 Aligned_cols=269 Identities=12% Similarity=0.078 Sum_probs=167.4
Q ss_pred ccccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHH
Q 014724 107 LIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYT 186 (419)
Q Consensus 107 L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~ 186 (419)
|..+.++..+++++++.+.+. +..+...|+..+...+++ +++++++|.+. .+++++|++|+..++.
T Consensus 15 l~~~~~p~~~~~~~~~~~~~~-----~~~~~~~y~~~~~~~~l~----~~la~~~~~~~-----~i~~~~G~~a~~~al~ 80 (357)
T 3lws_A 15 QISGHGKRNVGVLKTAFAAVA-----DEMASDQYGTGAIIEPFE----QKFADVLGMDD-----AVFFPSGTMAQQVALR 80 (357)
T ss_dssp ESSBSSCCBHHHHHHHHTTSC-----TTCBCEETTEETTHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHH
T ss_pred cccCCCCCCHHHHHHHHHHhh-----cccCcccccCChHHHHHH----HHHHHHhCCCc-----EEEecCcHHHHHHHHH
Confidence 455666656666665543221 011112233334445555 67888889854 3677999999999999
Q ss_pred HccCCCC--EEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC
Q 014724 187 AILKPHD--RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR 264 (419)
Q Consensus 187 all~pGD--~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~ 264 (419)
+++++|| .|++.++.|....... ......|. ++++++. +++.+|+++|+++. ++++|++++|+||+
T Consensus 81 ~~~~~gd~~~vi~~~~~~~~~~~~~-----~~~~~~g~--~~~~v~~--~~~~~d~~~l~~~~---~~~~v~~~~p~np~ 148 (357)
T 3lws_A 81 IWSDETDNRTVAYHPLCHLEIHEQD-----GLKELHPI--ETILVGA--ADRLMTLDEIKALP---DIACLLLELPQREI 148 (357)
T ss_dssp HHHHHHTCCEEEECTTCHHHHSSTT-----HHHHHSSC--EEEECSC--TTSCCCHHHHHTCC---SCSEEEEESSBGGG
T ss_pred HHhhcCCCcEEEecccceeeeeccc-----hhhhccCc--EEEEecC--CCCCcCHHHHhcCc---CcceEEEEcccccC
Confidence 9999998 6666655443322110 01122343 5555543 45789999999873 38999999988763
Q ss_pred ---cC---ChHHHHHHHHHhCCEEEEecccccccc-ccCCcCCCC-CCCcEEEeCCCCcCCCCCeeEEEEeCCCcchhhH
Q 014724 265 ---DF---DYPRMRQIADAVGALLMMDMAHISGLV-AASVVADPF-KYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVEL 336 (419)
Q Consensus 265 ---~~---dl~~I~~ia~~~ga~livD~ah~~Gl~-~~g~~~~~~-~~~Div~~S~hK~l~GprgG~i~~~~~~~~~~~l 336 (419)
.. ++++|+++|++||++||+|++|..+.. +.+.....+ .+.|++++|+||+|.||.||+++.++ ++
T Consensus 149 ~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~gg~~~~~~------~~ 222 (357)
T 3lws_A 149 GGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIAGLFDSIYISFYKGLGGIAGAILAGPA------AF 222 (357)
T ss_dssp TSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHHTTSSEEEEESSSTTCCSSCEEEEECH------HH
T ss_pred CceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChHHHHhcCCEEEEeccccCCCCceEEEEcCH------HH
Confidence 33 488999999999999999999763221 111101111 25789999999999899999998877 56
Q ss_pred HHHhhhcc--cCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEEecCCCcceeEEEEeCC
Q 014724 337 ESAINNAV--FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 337 ~~~i~~~~--~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~~~~t~~hlv~vd~~~ 413 (419)
.+.+.... +.+..........++ ..+++... +..++..++++++.+.|++. |+++......++++|+++..
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~-----~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~ 296 (357)
T 3lws_A 223 CQTARIWKRRYGGDLISLYPYIVSA-DYYYELRK-----DRMGQYYEQAKQLAEQFNALPGVHTTPEVPVSNMFHLHFDG 296 (357)
T ss_dssp HHHHHHHHHHTTCCCSCCHHHHHHH-HHHHHHHT-----TCHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEEES
T ss_pred HHHHHHHHHHhcCCcccchHHHHHH-HHHHHHHH-----HHHHHHHHHHHHHHHHHHhCCCCeeccCCCcceEEEEEecC
Confidence 66654321 111111111111222 23444321 22344677788999999997 89885334567899999865
No 127
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.85 E-value=1.9e-19 Score=186.31 Aligned_cols=239 Identities=14% Similarity=0.083 Sum_probs=161.4
Q ss_pred hHHHHHHHHHHHHHHHHcCCCC-CCCceeEecCChHHHHHHHHHHccC--------CC-----C-EEEEeCCCCCccccC
Q 014724 144 EYIDELETLCQKRALAAFNLDE-NKWGVNVQPLSGSPANFEVYTAILK--------PH-----D-RIMGLDLPHGGHLSH 208 (419)
Q Consensus 144 ~~~~~lE~~~~~~la~~~g~~~-~~~~v~V~~~sGt~A~~~~~~all~--------pG-----D-~Vl~~~~~~~g~~s~ 208 (419)
....++|+.+++++++++|++. .+ ..+++++||+||+.++.++.+ +| | +|+++++.|.++.
T Consensus 128 ~~~~~le~~~~~~la~~~g~~~~~~--~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s~~-- 203 (504)
T 2okj_A 128 PVFVLMEQITLKKMREIVGWSSKDG--DGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIK-- 203 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCSSSC--EEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHH--
T ss_pred hHHHHHHHHHHHHHHHHhCCCCCCC--CEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHHHH--
Confidence 4456889888899999999983 12 235666778999999888753 67 7 7888887776543
Q ss_pred cccccccccccccccc-EEEecccCCCCCCCCHHHHHHHhhhc-----CCeEEEEcCCCCC--CcCChHHHHHHHHHhCC
Q 014724 209 GFMTPKRRVSGTSIYF-ESMPYRLDESTGLVDYDMLEKTAILF-----RPKLIIAGASAYP--RDFDYPRMRQIADAVGA 280 (419)
Q Consensus 209 ~~~~~~~~i~~~g~~~-~~v~~~~~~~~~~iD~d~Le~~l~~~-----~pklIi~~~s~~p--~~~dl~~I~~ia~~~ga 280 (419)
+.+...|.+. +++.++++ +++.+|+++|++.+++. +|++|+++.++|+ ...|+++|+++|++||+
T Consensus 204 ------~~~~~~g~g~~~v~~v~~~-~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~g~ 276 (504)
T 2okj_A 204 ------KAGAALGFGTDNVILIKCN-ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNL 276 (504)
T ss_dssp ------HHHHHTTSCGGGEEEECBC-TTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHHHHHHHHHTC
T ss_pred ------HHHHHcCCCcccEEEEecC-CCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCC
Confidence 1223344422 34444455 46899999999999753 5888988877765 46899999999999999
Q ss_pred EEEEeccccccccccCCcCCCC---CCCcEEEeCCCCcCCCCC-eeEEEEeCCCcchhhHHHHhhhcccCCC--------
Q 014724 281 LLMMDMAHISGLVAASVVADPF---KYCDVVTTTTHKSLRGPR-GGMIFFKKDPVLGVELESAINNAVFPGL-------- 348 (419)
Q Consensus 281 ~livD~ah~~Gl~~~g~~~~~~---~~~Div~~S~hK~l~Gpr-gG~i~~~~~~~~~~~l~~~i~~~~~~~~-------- 348 (419)
++++|++|..+......+...+ +++|++++++||++.+|. +|+++++++ ++.+.......+++
T Consensus 277 ~lhvD~a~~~~~~~~~~~~~~~~g~~~~D~i~~~~hK~~~~p~~~g~l~~~~~-----~~~~~~~~~~~~~l~~~~~~~~ 351 (504)
T 2okj_A 277 WLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEK-----GILQGCNQMCAGYLFQPDKQYD 351 (504)
T ss_dssp EEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESST-----THHHHHHCCCCSSSCCSCCSSC
T ss_pred EEEEehhhhhHHHhCHhhHhhcCCcccCCEEEECchhhcCCCcceEEEEEECH-----HHHHHHhcCCCccccCCccccc
Confidence 9999999876654322211122 268999999999998775 599998874 34333111111111
Q ss_pred ----------CCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEEec
Q 014724 349 ----------QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVS 399 (419)
Q Consensus 349 ----------~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~~ 399 (419)
+.+-....+ ++..+++.+..++++++.++..+++++|.+.|++. |++++.
T Consensus 352 ~~~~~~~~~~~~~rr~~~l-~~~a~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~ 412 (504)
T 2okj_A 352 VSYDTGDKAIQCGRHVDIF-KFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVF 412 (504)
T ss_dssp GGGCCGGGSSCSSCBCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEESS
T ss_pred CcCCcccCCCCCCCCccHH-HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEe
Confidence 111001111 12223333333567888899999999999999986 999875
No 128
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.85 E-value=4.9e-20 Score=182.49 Aligned_cols=233 Identities=14% Similarity=0.115 Sum_probs=157.2
Q ss_pred HHHHHHc-CCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCC
Q 014724 155 KRALAAF-NLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE 233 (419)
Q Consensus 155 ~~la~~~-g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~ 233 (419)
+.+++++ +++++ ..+++++|++|+..++.++++|||+|++.+|.|.++.. .+...|.. ++.+++++
T Consensus 70 ~~la~~~~~~~~~---~v~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~--------~~~~~g~~--~~~v~~~~ 136 (375)
T 3op7_A 70 KSVSQLYTGVKPE---QILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYD--------IPKSLGAE--VDLWQIEE 136 (375)
T ss_dssp HHHHTTSSSCCGG---GEEEESHHHHHHHHHHHHHCCTTCEEEEEESSCTHHHH--------HHHHTTCE--EEEEEEEG
T ss_pred HHHHHHhccCChh---hEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHH--------HHHHcCCE--EEEEeccc
Confidence 5566766 45553 12445556889999999999999999999998876532 22345554 44444442
Q ss_pred -CCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCC---hHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--CC
Q 014724 234 -STGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YC 305 (419)
Q Consensus 234 -~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~d---l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~ 305 (419)
+++.+|+++|++.+++ ++|+|++++++||+ ..+ +++|.++|++||++||+|++|. ++...+ .+...+ +.
T Consensus 137 ~~~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~-~~~~~~-~~~~~~~~~~ 213 (375)
T 3op7_A 137 ENGWLPDLEKLRQLIRP-TTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYR-SFSELD-VPSIIEVYDK 213 (375)
T ss_dssp GGTTEECHHHHHHHCCT-TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSC-CCSSSC-CCCHHHHCTT
T ss_pred cCCCCCCHHHHHHhhcc-CCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccc-cccccC-CCchhhhcCC
Confidence 3567899999999974 89999999888874 456 8999999999999999999975 333221 111111 45
Q ss_pred cEEEeCCCCcC--CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHH
Q 014724 306 DVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNC 383 (419)
Q Consensus 306 Div~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~ 383 (419)
+++++|+||++ +|.|+|++++++ ++.+.+.........+++... .++...+++.. ....++..+++.+++
T Consensus 214 ~i~~~s~sK~~~~~G~r~G~v~~~~------~l~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~-~~~~~~~~~~~~~~~ 285 (375)
T 3op7_A 214 GIAVNSLSKTYSLPGIRIGWVAANH------QVTDILRDYRDYTMICAGVFD-DLVAQLALAHY-QEILERNRHILEENL 285 (375)
T ss_dssp EEEEEESSSSSSCGGGCCEEEECCH------HHHHHHTTTGGGTTSCCCHHH-HHHHHHHHHTH-HHHHHHHHHHHHHHH
T ss_pred EEEEeEChhhcCCcccceEEEEeCH------HHHHHHHHHHhhhccCCCcHH-HHHHHHHHhcc-HHHHHHHHHHHHHHH
Confidence 58899999998 577889999866 677777654333323232222 22223344432 123466677778899
Q ss_pred HHHHHHHHhC-CcEEecCCCcceeEEEEeC
Q 014724 384 RALASRLVEL-GYKLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 384 ~~l~~~L~~~-G~~v~~~~t~~hlv~vd~~ 412 (419)
+++.+.|++. |+.+... ...+.+|+.+.
T Consensus 286 ~~l~~~l~~~~~~~~~~~-~~~~~~~~~~~ 314 (375)
T 3op7_A 286 AILDQWIEEEPLVSYIRP-AVVSTSFVKIA 314 (375)
T ss_dssp HHHHHHHHHCTTEEECCC-SSSSCEEEEEC
T ss_pred HHHHHHHhhCCCceEecC-CCeEEEeEEcC
Confidence 9999999885 7776542 33455666664
No 129
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.85 E-value=6.3e-21 Score=195.17 Aligned_cols=278 Identities=14% Similarity=0.151 Sum_probs=176.1
Q ss_pred cCCCChHHHHHHHhhhhhccCCCCCC-CCCC------CCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChH-HHH
Q 014724 110 SENFTSRAVMEAVGSCLTNKYSEGLP-GKRY------YGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PAN 181 (419)
Q Consensus 110 sen~~~~~V~eal~~~l~~~y~~g~p-~~r~------~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt-~A~ 181 (419)
+..+.++.|.+++.......|..+.. ...+ +.+.....++++.+++++++++|++.+ .+++++|| .+|
T Consensus 88 a~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~----~~~t~g~te~a~ 163 (456)
T 2z67_A 88 RIGEREARTYSKIHEELSSGFCHGIGRSGNLVDPQPKASGASIMYALTNKILESFFKQLGLNVH----AIATPISTGMSI 163 (456)
T ss_dssp ECSSCCCCCSCHHHHHHTTTCTTCBSBTTBTTSCCTTBHHHHHHHHHHHHHHHHHHHHTTCCCE----EEEESSCHHHHH
T ss_pred ccccccccccccccCccccccCCCccHHHHHHhhCcccccCcHHHHHHHHHHHHHHHHcCCCCC----EEEeCcHHHHHH
Confidence 33456777777776543222221111 0000 112223567777899999999999862 25555668 467
Q ss_pred HHHHHHccC--CCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHh-hh---cCCeEE
Q 014724 182 FEVYTAILK--PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTA-IL---FRPKLI 255 (419)
Q Consensus 182 ~~~~~all~--pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l-~~---~~pklI 255 (419)
.+++.++.. +||.|++++++|.+.. +.+...|..+..+++....+++.+|+++|++++ +. .++++|
T Consensus 164 ~~al~~~~~~~~~~~vi~~~~~h~s~~--------~~~~~~G~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~v 235 (456)
T 2z67_A 164 SLCLSAARKKYGSNVVIYPYASHKSPI--------KAVSFVGMNMRLVETVLDGDRVYVPVEDIENAIKKEIELGNRPCV 235 (456)
T ss_dssp HHHHHHHHHHHCCCEEEEECCCCHHHH--------HHHHHTTCEEEEECCEEETTEEECCHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHhcCCCEEEEECCCcHHHH--------HHHHHcCCCceEEEEeccCCCCCcCHHHHHHHHHHHhhCCCeEEE
Confidence 666666544 7788998888776643 123445665444443111246789999999999 42 367778
Q ss_pred EEcCCCCC--CcCChHHHHHHHHHhCCEEEEecccccccccc-CCcCCCCC-CCcEEEeCCCCcCCCCC-eeEEEEeCCC
Q 014724 256 IAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAA-SVVADPFK-YCDVVTTTTHKSLRGPR-GGMIFFKKDP 330 (419)
Q Consensus 256 i~~~s~~p--~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~-g~~~~~~~-~~Div~~S~hK~l~Gpr-gG~i~~~~~~ 330 (419)
++..++|+ ...|+++|+++|+++|+++++|+||.....+. ......++ ++|++++|+||++.+|. +|+++++++
T Consensus 236 v~~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~~~~~g~~~~~~~~~~~~~D~~~~s~hK~~~~p~g~G~l~~~~~- 314 (456)
T 2z67_A 236 LSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFKYRVDAVVSSSDKNLLTPIGGGLVYSTDA- 314 (456)
T ss_dssp EEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHTSCCSEEEEEHHHHHCCCSSCEEEEESCH-
T ss_pred EEeCCCCCCCCcCCHHHHHHHHHHcCCcEEEECcchHHHHHhhHHHHHhhCCCCCEEEEcCCCCcCCCCCeEEEEEcCH-
Confidence 77777665 57899999999999999999999864222100 00000011 68999999999876664 599999653
Q ss_pred cchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC----CcEEecCCCccee
Q 014724 331 VLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL----GYKLVSGGSDNHL 406 (419)
Q Consensus 331 ~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~----G~~v~~~~t~~hl 406 (419)
++.+.+... +.+.. +... ..++..++..+...++++..++..+++++|.+.|++. |+.++.. + ++
T Consensus 315 ----~~~~~l~~~-~~g~~--~~~~-~~~~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~v~~~--~-~~ 383 (456)
T 2z67_A 315 ----EFIKEISLS-YPGRA--SATP-VVNTLVSLLSMGSKNYLELVKNQKNSKKLLDELLNDLSKKTGGKFLDV--E-SP 383 (456)
T ss_dssp ----HHHHHHHTT-SCSCB--CSHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCBCCC--C-CS
T ss_pred ----HHHhhcCcC-CCCCC--CCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCEecCC--C-Ce
Confidence 566666432 22221 1122 2333445555444567888899999999999999986 8776642 3 66
Q ss_pred EEEEe
Q 014724 407 VLVDL 411 (419)
Q Consensus 407 v~vd~ 411 (419)
+++++
T Consensus 384 v~~~~ 388 (456)
T 2z67_A 384 IASCI 388 (456)
T ss_dssp SEEEE
T ss_pred EEEEE
Confidence 77777
No 130
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.84 E-value=1.9e-20 Score=188.92 Aligned_cols=309 Identities=15% Similarity=0.153 Sum_probs=185.9
Q ss_pred hccccccChh-HHHHHHHHHHHh-hhccccccc---C-CC---ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHH
Q 014724 80 DYSLGEADPE-VCEIITKEKERQ-FKSLELIAS---E-NF---TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELE 150 (419)
Q Consensus 80 ~~~l~~~~~~-~~~~~~~e~~r~-~~~i~L~~s---e-n~---~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE 150 (419)
.+++..++++ ++.+........ .+.|+|..+ + +. +++.|++++.+.+.+....+|+.. .|. .+++
T Consensus 25 ~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~---~g~---~~lr 98 (420)
T 4f4e_A 25 FSAVELAPRDPILGLNEAFNADTRPTKVNLGVGVYTNEDGKIPLLRAVRDAEKARVEAGLPRGYLPI---DGI---AAYD 98 (420)
T ss_dssp TTTCCCCCCCHHHHHHHHHHHCCCSSCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTCCCCCCCCT---TCC---HHHH
T ss_pred hhcCCcCCCChHHHHHHHHHhcCCCCcEEeeeeeeECCCCCccCcHHHHHHHHHHhccCCCCCCCCC---CCc---HHHH
Confidence 4567778887 455554433322 456888877 2 22 348999999988765333345431 232 2555
Q ss_pred HHHHHHHHHHcCC--CCCCCceeEecC-ChHHHHHHH--HHHccCCCCEEEEeCCCCCccccCccccccccccccccccE
Q 014724 151 TLCQKRALAAFNL--DENKWGVNVQPL-SGSPANFEV--YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFE 225 (419)
Q Consensus 151 ~~~~~~la~~~g~--~~~~~~v~V~~~-sGt~A~~~~--~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~ 225 (419)
+.+.+++....+. +++. ++|+++ +|++|+..+ +.++++|||+|++++|.|.++.. .+...|..+.
T Consensus 99 ~~ia~~l~~~~~~~~~~~~--~~i~~t~G~t~al~~~~~~~~~~~~gd~Vlv~~p~~~~~~~--------~~~~~g~~~~ 168 (420)
T 4f4e_A 99 ASVQKLLLGDDSPLIAAGR--VVTAQALGGTGALKIGADFLRTLNPKAKVAISDPSWENHRA--------LFDMAGFEVV 168 (420)
T ss_dssp HHHHHHHHCTTCHHHHTTC--EEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHH--------HHHHTTCCEE
T ss_pred HHHHHHhcCCCccccccCc--eEEEECCccHHHHHHHHHHHHHhCCCCEEEEeCCCcHhHHH--------HHHHcCCeEE
Confidence 4444554433321 2211 134455 457899988 56778999999999998876532 2344565444
Q ss_pred EEecccCCCCCCCCHHHHHHHhhh--cCCeEEEEcCCCCCC--c---CChHHHHHHHHHhCCEEEEeccccccccccCC-
Q 014724 226 SMPYRLDESTGLVDYDMLEKTAIL--FRPKLIIAGASAYPR--D---FDYPRMRQIADAVGALLMMDMAHISGLVAASV- 297 (419)
Q Consensus 226 ~v~~~~~~~~~~iD~d~Le~~l~~--~~pklIi~~~s~~p~--~---~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~- 297 (419)
.+++. +++++.+|++.|++.+++ .++++|++++++||+ . .++++|+++|++||+++|+|++| .++.+.+.
T Consensus 169 ~v~~~-~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y-~~~~~~~~~ 246 (420)
T 4f4e_A 169 AYPYY-DAKTNGVNFDGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAY-QGFGESIEA 246 (420)
T ss_dssp EEECE-ETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESC-TTSSSCTTG
T ss_pred Eeeee-ccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccc-ccccCCcch
Confidence 44431 334678999999999974 356788999999985 2 24778999999999999999995 55554321
Q ss_pred -cCC--CC---CCCcEEEeCCCCcC--CCCCeeEEEEeCCCcchhhHHH----HhhhcccCCCCCCChHHHHHHHHHHHH
Q 014724 298 -VAD--PF---KYCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELES----AINNAVFPGLQGGPHNHTIGGLAVCLK 365 (419)
Q Consensus 298 -~~~--~~---~~~Div~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~----~i~~~~~~~~~g~p~~~~iaala~al~ 365 (419)
... .+ ...+++++|+||+| +|+|.|+++...... ++.+ .+.........+.+.. ...+.+.++.
T Consensus 247 ~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~ 322 (420)
T 4f4e_A 247 DAAAVRLFAAANLNVFVSSSFSKSFSLYGERVGALSIITDSK---DEAARVLSQLKRVIRTNYSNPPTH-GGAIVAAVLA 322 (420)
T ss_dssp GGHHHHHHHHTTCCEEEEEECTTTTTCGGGCEEEEEEECSSH---HHHHHHHHHHHHHHHTTTSSCCSH-HHHHHHHHHH
T ss_pred hhHHHHHHHhcCCCEEEEEeCCccCcCcCCCcEEEEEEcCCH---HHHHHHHHHHHHHHhcccCCCCHH-HHHHHHHHhc
Confidence 010 01 13458899999998 488999987522100 3332 2222111222222222 2222222232
Q ss_pred Hh-----cChHHHHHHHHHHHHHHHHHHHHHhC----CcEEecCCCcceeEEEEe
Q 014724 366 HA-----QSPEFKVYQNKVVSNCRALASRLVEL----GYKLVSGGSDNHLVLVDL 411 (419)
Q Consensus 366 ~~-----~~~~~~~~~~~v~~n~~~l~~~L~~~----G~~v~~~~t~~hlv~vd~ 411 (419)
.. .....++..+++.++++++.+.|++. |+++... ....++|+++
T Consensus 323 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~-~~g~~~~~~~ 376 (420)
T 4f4e_A 323 SPELRASWVQELGEMRDRIRAMRNGLVERLKAAGIERDFSFINA-QRGMFSYSGL 376 (420)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHHH-SCSSEEECCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeECC-CccEEEEeCC
Confidence 21 11335677888899999999999986 6665532 2334566665
No 131
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.84 E-value=8.8e-20 Score=187.78 Aligned_cols=257 Identities=11% Similarity=-0.014 Sum_probs=170.0
Q ss_pred hhHHHHHHHHHHHHHHHHcCCCCCC------CceeEecCChHHHHHHHHHHcc-------------------CCCCEEEE
Q 014724 143 NEYIDELETLCQKRALAAFNLDENK------WGVNVQPLSGSPANFEVYTAIL-------------------KPHDRIMG 197 (419)
Q Consensus 143 ~~~~~~lE~~~~~~la~~~g~~~~~------~~v~V~~~sGt~A~~~~~~all-------------------~pGD~Vl~ 197 (419)
.+...++|+.+.+|+++++|.+.+. .+..+++++||+||+.++.+.. .|++.|++
T Consensus 108 ~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~vi~ 187 (475)
T 3k40_A 108 SPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLVGYC 187 (475)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEEEEE
T ss_pred CcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCeEEEE
Confidence 3556799999999999999998531 1124677889999988887652 14578999
Q ss_pred eCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcC-----CeEEEEcCCC--CCCcCChHH
Q 014724 198 LDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFR-----PKLIIAGASA--YPRDFDYPR 270 (419)
Q Consensus 198 ~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~-----pklIi~~~s~--~p~~~dl~~ 270 (419)
...+|.+.. +.+...|. +++.++++ +++ +|+++|++.+++.+ |++|++..++ ++...|+++
T Consensus 188 s~~~H~s~~--------~~~~~~g~--~~~~v~~d-~~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~l~~ 255 (475)
T 3k40_A 188 SDQAHSSVE--------RAGLLGGV--KLRSVQSE-NHR-MRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYLDE 255 (475)
T ss_dssp ETTSCHHHH--------HHHHHHTC--EEEEECCB-TTB-CCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHH
T ss_pred CCCchHHHH--------HHHHHcCC--ceEEEECC-CCC-cCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCCHHH
Confidence 988876543 23344565 45555565 467 99999999997532 6666655433 456789999
Q ss_pred HHHHHHHhCCEEEEeccccccccccCCcCCCC---CCCcEEEeCCCCcCCCCCe-eEEEEeCCCcchhhHH---HHhhhc
Q 014724 271 MRQIADAVGALLMMDMAHISGLVAASVVADPF---KYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELE---SAINNA 343 (419)
Q Consensus 271 I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~---~~~Div~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~---~~i~~~ 343 (419)
|+++|++||+++++|+||..+..........+ +.+|++++++||++.+|.| |+++.+++......+. ..+...
T Consensus 256 I~~la~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p~g~g~l~~~~~~~l~~~~~~~~~yl~~~ 335 (475)
T 3k40_A 256 CGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVNFDCSAMWLKDPSWVVNAFNVDPLYLKHD 335 (475)
T ss_dssp HHHHHHHTTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESSGGGC--------------
T ss_pred HHHHHHHhCCeEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccCCCCceEEEEEeCHHHHHHHhcCCccccCCC
Confidence 99999999999999999876644322211112 2579999999999988866 8888876411000000 001000
Q ss_pred --------ccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEEecCCCcceeEEEEeCC
Q 014724 344 --------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 344 --------~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~~~~t~~hlv~vd~~~ 413 (419)
....++++... ...++..+++.+..++++++.++..++++++++.|++. ||+++.. ...+++++++.+
T Consensus 336 ~~~~~~~~~~~~~~~sr~~-~~l~l~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~l~~~-~~~~iv~f~~~~ 412 (475)
T 3k40_A 336 MQGSAPDYRHWQIPLGRRF-RALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVADSRFELAAE-INMGLVCFRLKG 412 (475)
T ss_dssp -------------CCCGGG-THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEESSC-CBTTEEEEEESS
T ss_pred cCCCCCCcccccccCCCcc-cHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecC-CceEEEEEEeCC
Confidence 00011222111 12334445655555567888999999999999999997 9998753 467788888754
No 132
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.84 E-value=9e-20 Score=179.31 Aligned_cols=264 Identities=16% Similarity=0.126 Sum_probs=177.5
Q ss_pred hhcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHH
Q 014724 102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP 179 (419)
Q Consensus 102 ~~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~ 179 (419)
++.|+|..++++ +++.|++++.+.+... .+|+.. + ..++ +++++++++++++ ..+++++|++
T Consensus 26 ~~~idl~~~~~~~~~~~~v~~a~~~~~~~~--~~y~~~----~---~~~l----~~~la~~~~~~~~---~i~~~~g~t~ 89 (361)
T 3ftb_A 26 RELLDYSSNINPLGIPKSFLNNIDEGIKNL--GVYPDV----N---YRRL----NKSIENYLKLKDI---GIVLGNGASE 89 (361)
T ss_dssp --CEETTCCCCTTCSCHHHHTTHHHHHHGG--GSCCCT----T---CHHH----HHHHHHHHTCCSC---EEEEESSHHH
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHHHHh--cCCCCc----c---HHHH----HHHHHHHhCCCcc---eEEEcCCHHH
Confidence 457888888765 5799999998877642 244431 1 1244 4677888898764 2244455678
Q ss_pred HHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcC
Q 014724 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 259 (419)
Q Consensus 180 A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~ 259 (419)
|+..++.++ |+|++..|.|.++.. .+...|. +++.++.++ ++.+|++++++.+++ +++|++++
T Consensus 90 al~~~~~~~----d~vi~~~~~~~~~~~--------~~~~~g~--~~~~~~~~~-~~~~~~~~l~~~l~~--~~~v~i~~ 152 (361)
T 3ftb_A 90 IIELSISLF----EKILIIVPSYAEYEI--------NAKKHGV--SVVFSYLDE-NMCIDYEDIISKIDD--VDSVIIGN 152 (361)
T ss_dssp HHHHHHTTC----SEEEEEESCCTHHHH--------HHHHTTC--EEEEEECCT-TSCCCHHHHHHHTTT--CSEEEEET
T ss_pred HHHHHHHHc----CcEEEecCChHHHHH--------HHHHcCC--eEEEeecCc-ccCCCHHHHHHhccC--CCEEEEeC
Confidence 999998887 999999998876531 2234455 445555553 457888999999975 89999999
Q ss_pred CCCCC--cC---ChHHHHHHHHHhCCEEEEeccccccccccCCcCCCC---C--CCcEEEeCCCCcC--CCCCeeEEE-E
Q 014724 260 SAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K--YCDVVTTTTHKSL--RGPRGGMIF-F 326 (419)
Q Consensus 260 s~~p~--~~---dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~---~--~~Div~~S~hK~l--~GprgG~i~-~ 326 (419)
|+||+ .. ++++|+++|++||+++|+|++|. ++... .....+ . ...++++|+||++ +|.|.|+++ .
T Consensus 153 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~-~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~ 230 (361)
T 3ftb_A 153 PNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFI-EFTGD-PSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITN 230 (361)
T ss_dssp TBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECSSG-GGTCC-TTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEES
T ss_pred CCCCCCCCCCHHHHHHHHHHhhhcCCEEEEECcch-hhcCC-cccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeC
Confidence 99885 33 47788888999999999999974 33332 111111 1 2347899999987 567889988 4
Q ss_pred eCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcE-EecCCCcc
Q 014724 327 KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYK-LVSGGSDN 404 (419)
Q Consensus 327 ~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~-v~~~~t~~ 404 (419)
++ ++.+.+.....++ +++....+++..+++. .+.+++..+++.++++++.+.|++. |++ +.. ...
T Consensus 231 ~~------~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~--~~~ 297 (361)
T 3ftb_A 231 NK------EIAAKIKAKQNPW---NINCFAEMAAINCLKD--TNYIEESLLWIKKERKRFIEELNKIGFIKRVFS--PHA 297 (361)
T ss_dssp CH------HHHHHHHTTSCTT---CSCHHHHHHHHHTSSC--HHHHHHHHHHHHHHHHHHHHHHHHSSSEEEEEC--CSS
T ss_pred CH------HHHHHHHhhCCCC---CCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHhCCCCceecC--CCC
Confidence 54 6777776543332 3333334444434432 1345777888999999999999987 787 654 234
Q ss_pred eeEEEEeCC
Q 014724 405 HLVLVDLRP 413 (419)
Q Consensus 405 hlv~vd~~~ 413 (419)
.++|+++..
T Consensus 298 ~~~~~~~~~ 306 (361)
T 3ftb_A 298 NFVLCRLEN 306 (361)
T ss_dssp SEEEEEESS
T ss_pred eEEEEEcCC
Confidence 568888764
No 133
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.84 E-value=3.1e-20 Score=183.71 Aligned_cols=254 Identities=12% Similarity=0.091 Sum_probs=170.6
Q ss_pred cccccccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHH
Q 014724 104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 183 (419)
Q Consensus 104 ~i~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~ 183 (419)
.+++..+.+..++ +++++.+.+.... | + ..+...+++ +.+++++|.+. .+++++|++|+..
T Consensus 8 ~~~l~~~~~~~~~-~~~~~~~~~~~~~---~-----~-~~~~~~~l~----~~la~~~~~~~-----~~~~~~gt~a~~~ 68 (374)
T 3uwc_A 8 YSYLERQFADIEP-YLNDLREFIKTAD---F-----T-LGAELEKFE----KRFAALHNAPH-----AIGVGTGTDALAM 68 (374)
T ss_dssp SCCHHHHTSSCHH-HHHHHHHHHHHTC---C-----S-SCHHHHHHH----HHHHHHTTCSE-----EEEESCHHHHHHH
T ss_pred eeccccCCCCchH-HHHHHHHHHHcCC---c-----c-cChhHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHH
Confidence 4566666666667 9999888775421 1 1 123334444 67888998873 3778899999999
Q ss_pred HHHHc-cCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC
Q 014724 184 VYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 262 (419)
Q Consensus 184 ~~~al-l~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~ 262 (419)
++.++ ++|||+|+++++.|.++.. .+...|. +++.++++ +++.+|++++++.+++ ++++|+.+++ +
T Consensus 69 ~~~~~~~~~gd~v~~~~~~~~~~~~--------~~~~~g~--~~~~~~~~-~~~~~d~~~l~~~~~~-~~~~v~~~n~-~ 135 (374)
T 3uwc_A 69 SFKMLNIGAGDEVITCANTFIASVG--------AIVQAGA--TPVLVDSE-NGYVIDPEKIEAAITD-KTKAIMPVHY-T 135 (374)
T ss_dssp HHHHTTCCTTCEEEEESSSCHHHHH--------HHHHTTC--EEEEECBC-TTSSBCGGGTGGGCCT-TEEEECCBCG-G
T ss_pred HHHHcCCCCCCEEEECCCccHHHHH--------HHHHcCC--EEEEEecC-CCCCcCHHHHHHhCCC-CceEEEEeCC-c
Confidence 99999 9999999999998876541 2334555 45555555 5788999999999875 7888873321 2
Q ss_pred CCcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC-CCcEEEeCCC--CcCCC-CCeeEEEEeCCCcchhhHHH
Q 014724 263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTH--KSLRG-PRGGMIFFKKDPVLGVELES 338 (419)
Q Consensus 263 p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~-~~Div~~S~h--K~l~G-prgG~i~~~~~~~~~~~l~~ 338 (419)
+...|+++|.++|+++|+++|+|++|..|....+. ++. ..|++++|+| |++++ +.+|+++++++ ++.+
T Consensus 136 G~~~~~~~i~~~~~~~~~~li~D~~~~~g~~~~~~---~~~~~~d~~~~s~~~~K~l~~~g~~g~~~~~~~-----~~~~ 207 (374)
T 3uwc_A 136 GNIADMPALAKIAKKHNLHIVEDACQTILGRINDK---FVGSWGQFACFSLHPLKNLNVWSDAGVIITHSD-----EYAE 207 (374)
T ss_dssp GCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTE---ETTSSSSEEEEECSSSSSSCCSSCCEEEEESCH-----HHHH
T ss_pred CCcCCHHHHHHHHHHcCCEEEEeCCCccCceeCCe---eccccccEEEEeCCCCCcCCccceeEEEEeCCH-----HHHH
Confidence 35679999999999999999999999877543321 121 4699999988 99977 46899988774 5555
Q ss_pred HhhhcccCCC-------CCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCC--cEEe
Q 014724 339 AINNAVFPGL-------QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG--YKLV 398 (419)
Q Consensus 339 ~i~~~~~~~~-------~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G--~~v~ 398 (419)
.+......+. ..+... .+.++..++.......++++.++..++++++.+.|.+.+ +++.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 275 (374)
T 3uwc_A 208 KLRLYRNHGLINRDVCVEYGINC-RMDTIQAVIANRLMNQLETITEKRRGIAHLYDQSFVDLSEFIDVP 275 (374)
T ss_dssp HHHHHTBTTEEETTEESSCCCBC-BCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHTGGGTTTEECC
T ss_pred HHHHHHhcCccccCccccccccC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEec
Confidence 5443221110 001100 011122222222224567788889999999999998874 6654
No 134
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=99.84 E-value=5.6e-20 Score=185.55 Aligned_cols=305 Identities=15% Similarity=0.144 Sum_probs=187.1
Q ss_pred ccccccChh-HHHHHHHHHHHh-hhcccccccC----C---CChHHHHHHHhhhh-hccCCCCCCCCCCCCchhHHHHHH
Q 014724 81 YSLGEADPE-VCEIITKEKERQ-FKSLELIASE----N---FTSRAVMEAVGSCL-TNKYSEGLPGKRYYGGNEYIDELE 150 (419)
Q Consensus 81 ~~l~~~~~~-~~~~~~~e~~r~-~~~i~L~~se----n---~~~~~V~eal~~~l-~~~y~~g~p~~r~~~g~~~~~~lE 150 (419)
.++..++|+ ++.+.+..+... .+.|+|..|+ + ++++.|++|+. .+ ......+|+. ..|.. ++.
T Consensus 6 ~~~~~~~~~~i~~~~~~~~~~~~~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~~~~Y~~---~~G~~---~lr 78 (405)
T 3k7y_A 6 SSLENIEVDNILKTAREFKEDTCEEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYKEKPYLL---GNGTE---DFS 78 (405)
T ss_dssp GGCCCCCCCHHHHHHHHHTTSSCSSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCCCCCCCT---TSSCH---HHH
T ss_pred hcCCCCCCChHHHHHHHHhcCCCcCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCCCCCCCC---CCCcH---HHH
Confidence 467778887 577666543322 4568998774 2 35789999876 32 2222234543 12433 666
Q ss_pred HHHHHHHHHHcCCCC-CCCceeEecC-ChHHHHHHHHHHccC--CCCEEEEeCCCCCccccCccccccccccccccccEE
Q 014724 151 TLCQKRALAAFNLDE-NKWGVNVQPL-SGSPANFEVYTAILK--PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFES 226 (419)
Q Consensus 151 ~~~~~~la~~~g~~~-~~~~v~V~~~-sGt~A~~~~~~all~--pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~ 226 (419)
+.+.+++.+..+... +++ ++++.+ +|++|+..++.++++ | |+|++++|.+.++.. .+...|. ++
T Consensus 79 ~aia~~~~~~~~~~~~~~~-i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~~--------~~~~~g~--~~ 146 (405)
T 3k7y_A 79 TLTQNLIFGNNSKYIEDKK-ICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHVN--------MIESRGF--NL 146 (405)
T ss_dssp HHHHHHHHCSSCTTTTTTC-EEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHHH--------HHHTTTC--EE
T ss_pred HHHHHHHcCCCCccccccc-eEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHHH--------HHHHcCC--eE
Confidence 666677655444331 122 334444 456799999988887 9 999999999877642 2345666 44
Q ss_pred Eeccc-CCCCCCCCHHHHHHHhhhc-CCeEEEEcCC-CCCCc-----CChHHHHHHHHHhCCEEEEeccccccccccCCc
Q 014724 227 MPYRL-DESTGLVDYDMLEKTAILF-RPKLIIAGAS-AYPRD-----FDYPRMRQIADAVGALLMMDMAHISGLVAASVV 298 (419)
Q Consensus 227 v~~~~-~~~~~~iD~d~Le~~l~~~-~pklIi~~~s-~~p~~-----~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~ 298 (419)
+++++ +++++.+|+++|++.+++. ++++|+++.| +||+- .++++|.++|++||+++|+|++| .++.+.+..
T Consensus 147 ~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y-~~l~~~~~~ 225 (405)
T 3k7y_A 147 KYINFFDYNLIDINYDLFLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAY-QGFGHTNLE 225 (405)
T ss_dssp EEECCEETTTTEECHHHHHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESC-TTTSSSSTT
T ss_pred EEEeccccccCCcCHHHHHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCc-ccccCCCcc
Confidence 55544 3346789999999998753 4578888765 79862 24678999999999999999994 566543210
Q ss_pred ---C--CCC-C-C-CcEEEeCCCCcC--CCCCeeEEEEe--CCCcchhhHHHHh----hhcccCCCCCCChHHHHHHHHH
Q 014724 299 ---A--DPF-K-Y-CDVVTTTTHKSL--RGPRGGMIFFK--KDPVLGVELESAI----NNAVFPGLQGGPHNHTIGGLAV 362 (419)
Q Consensus 299 ---~--~~~-~-~-~Div~~S~hK~l--~GprgG~i~~~--~~~~~~~~l~~~i----~~~~~~~~~g~p~~~~iaala~ 362 (419)
. ..+ + + .-++++|+||+| +|+|.||+++. ++ ++.+++ ......... .++.....+.+.
T Consensus 226 ~~~~~~~~~~~~~~~~i~~~S~SK~~~l~GlRiG~~~~~~~~~-----~~~~~~~~~l~~~~~~~~~-~~~~~~q~~~~~ 299 (405)
T 3k7y_A 226 EDVLLIRKFEEKNIAFSVCQSFSKNMSLYGERAGALHIVCKNQ-----EEKKIVFNNLCFIVRKFYS-SPVIHTNRILCQ 299 (405)
T ss_dssp GGGHHHHHHHTTTCCEEEEEECTTTSCCTTTTEEEEEEECSSH-----HHHHHHHHHHHHHHHTTTS-SCCHHHHHHHHH
T ss_pred cchHHHHHHHhcCCcEEEEeeCCccCCCccccceEEEEEeCCH-----HHHHHHHHHHHHHHhcccC-CCcHHHHHHHHH
Confidence 0 001 1 2 237899999997 69999998652 22 343332 221111112 222222222233
Q ss_pred HHHHh--c---ChHHHHHHHHHHHHHHHHHHHHH----hCC----cEEecCCCcceeEEEEeC
Q 014724 363 CLKHA--Q---SPEFKVYQNKVVSNCRALASRLV----ELG----YKLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 363 al~~~--~---~~~~~~~~~~v~~n~~~l~~~L~----~~G----~~v~~~~t~~hlv~vd~~ 412 (419)
++..- . .++.+.+++++.++++.+.+.|+ +.| |++... ..+.++|+++.
T Consensus 300 ~l~~~~l~~~~~~~l~~~~~~~~~~R~~l~~~L~~~~~~~g~~~~~~~~~p-~gg~f~~~~l~ 361 (405)
T 3k7y_A 300 LLNNQNLKLNWIKELSQLSQRITNNRILFFNKLETYQKKYNLNYDWNVYKK-QRGLFSFVPLL 361 (405)
T ss_dssp HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCGGGGSS-CCSSEEECGGG
T ss_pred HhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCccccC-CceEEEecCCC
Confidence 33321 0 12345667788999999999999 776 455442 23456777654
No 135
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.84 E-value=3.7e-19 Score=184.79 Aligned_cols=240 Identities=14% Similarity=0.084 Sum_probs=159.9
Q ss_pred hHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHcc-------C-CCC------EEEEeCCCCCccccCc
Q 014724 144 EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL-------K-PHD------RIMGLDLPHGGHLSHG 209 (419)
Q Consensus 144 ~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all-------~-pGD------~Vl~~~~~~~g~~s~~ 209 (419)
+...++|+.+++++++++|++.. ..+++++||+||..++.++. + +|| +|++.+..|.++.
T Consensus 144 ~~~~~le~~~~~~la~l~g~~~~---~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~~--- 217 (515)
T 2jis_A 144 PVFVLMEEEVLRKLRALVGWSSG---DGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQ--- 217 (515)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSSC---EEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHH---
T ss_pred hHHHHHHHHHHHHHHHHhCCCCC---CeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHHHH---
Confidence 44568888899999999999853 23566677899998887763 2 686 7888887776643
Q ss_pred ccccccccccccccc-EEEecccCCCCCCCCHHHHHHHhhhc-----CCeEEEEcCCCCC--CcCChHHHHHHHHHhCCE
Q 014724 210 FMTPKRRVSGTSIYF-ESMPYRLDESTGLVDYDMLEKTAILF-----RPKLIIAGASAYP--RDFDYPRMRQIADAVGAL 281 (419)
Q Consensus 210 ~~~~~~~i~~~g~~~-~~v~~~~~~~~~~iD~d~Le~~l~~~-----~pklIi~~~s~~p--~~~dl~~I~~ia~~~ga~ 281 (419)
+.+...|.+. +++.++++ +++.+|+++|++.+++. +|++|++..++|+ ...|+++|+++|+++|++
T Consensus 218 -----~~~~~~g~g~~~v~~v~~~-~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~g~~ 291 (515)
T 2jis_A 218 -----KGAAFLGLGTDSVRVVKAD-ERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLW 291 (515)
T ss_dssp -----HHHHHTTSCGGGEEEECBC-TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCE
T ss_pred -----HHHHHcCCCCCcEEEEecC-CCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHcCCe
Confidence 1233445422 34444455 36899999999999753 4888888777665 468999999999999999
Q ss_pred EEEeccccccccccCCcCCCCC---CCcEEEeCCCCcCCCCCe-eEEEEeCCCcchhhHHHHhh----hcccC-------
Q 014724 282 LMMDMAHISGLVAASVVADPFK---YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAIN----NAVFP------- 346 (419)
Q Consensus 282 livD~ah~~Gl~~~g~~~~~~~---~~Div~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~----~~~~~------- 346 (419)
+++|++|+.+......+...++ ++|++++++||+|.+|.+ |+++++++. ++.+... ...+.
T Consensus 292 l~vD~a~~~~~~~~~~~~~~~~g~~~aD~v~~s~hK~l~~p~g~G~l~~~~~~----~~~~~~~~~~~~yl~~~~~~~~~ 367 (515)
T 2jis_A 292 LHVDAAWGGSVLLSQTHRHLLDGIQRADSVAWNPHKLLAAGLQCSALLLQDTS----NLLKRCHGSQASYLFQQDKFYDV 367 (515)
T ss_dssp EEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESCCS----CHHHHHHCC---------CCSCG
T ss_pred EEEehhhhhHHHhChhhHhhcCCCccCCEEEECcccccCCCCCeeEEEEeChH----HHHHHHhcCCchhccCCcccccc
Confidence 9999998766543221111232 679999999999988864 999888740 1322210 00000
Q ss_pred -------CCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEEecC
Q 014724 347 -------GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSG 400 (419)
Q Consensus 347 -------~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~~~ 400 (419)
.++.+.....+ ++..+++.+...+++++.++..+++++|.+.|++. |++++..
T Consensus 368 ~~~~~~~~~~~~rr~~al-~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~ 428 (515)
T 2jis_A 368 ALDTGDKVVQCGRRVDCL-KLWLMWKAQGDQGLERRIDQAFVLARYLVEEMKKREGFELVME 428 (515)
T ss_dssp GGCCGGGCSCSSCCCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSC
T ss_pred cCCCCCCCCCCCCcccHH-HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCC
Confidence 00111101111 22223333333567888899999999999999986 9998753
No 136
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.84 E-value=2.2e-19 Score=177.37 Aligned_cols=266 Identities=13% Similarity=0.061 Sum_probs=172.4
Q ss_pred hcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHH
Q 014724 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 180 (419)
Q Consensus 103 ~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A 180 (419)
+.|+|..+++. .++.|++++.+.+.. ..+|+.. | ..+++ +.+++++|++++ ..+++++|++|
T Consensus 25 ~~idl~~~~~~~~~~~~v~~a~~~~~~~--~~~y~~~----~---~~~l~----~~la~~~~~~~~---~v~~~~g~~~a 88 (364)
T 1lc5_A 25 QLLDFSANINPLGMPVSVKRALIDNLDC--IERYPDA----D---YFHLH----QALARHHQVPAS---WILAGNGETES 88 (364)
T ss_dssp GSEECSSCCCTTCCCHHHHHHHHHTGGG--GGSCCCT----T---CHHHH----HHHHHHHTSCGG---GEEEESSHHHH
T ss_pred ceEEeccccCCCCCCHHHHHHHHHHHHH--hhcCCCC----C---HHHHH----HHHHHHHCcCHH---HEEECCCHHHH
Confidence 46888877753 589999999887743 1234321 1 12444 567788888764 12444455789
Q ss_pred HHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCC-CCCCCCHHHHHHHhhhcCCeEEEEcC
Q 014724 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKLIIAGA 259 (419)
Q Consensus 181 ~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~-~~~~iD~d~Le~~l~~~~pklIi~~~ 259 (419)
+..++.++ +||+|++.+|.|.++.. .+...|. +++.++.++ ++..+ ++++.+.+. .++++|++++
T Consensus 89 l~~~~~~~--~gd~vl~~~p~y~~~~~--------~~~~~g~--~~~~v~~~~~~~~~~-l~~~~~~~~-~~~~~v~i~~ 154 (364)
T 1lc5_A 89 IFTVASGL--KPRRAMIVTPGFAEYGR--------ALAQSGC--EIRRWSLREADGWQL-TDAILEALT-PDLDCLFLCT 154 (364)
T ss_dssp HHHHHHHH--CCSEEEEEESCCTHHHH--------HHHHTTC--EEEEEECCGGGTTCC-CTTHHHHCC-TTCCEEEEES
T ss_pred HHHHHHHc--CCCeEEEeCCCcHHHHH--------HHHHcCC--eEEEEeCCcccccch-hHHHHHhcc-CCCCEEEEeC
Confidence 99999888 78999999998876531 2234455 444444442 12222 455555554 4789988888
Q ss_pred CCCCC--cCC---hHHHHHHHHHhCCEEEEeccccccccccCCcC-CCCC--CCcEEEeCCCCcC--CCCCeeEEE-EeC
Q 014724 260 SAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVA-DPFK--YCDVVTTTTHKSL--RGPRGGMIF-FKK 328 (419)
Q Consensus 260 s~~p~--~~d---l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~-~~~~--~~Div~~S~hK~l--~GprgG~i~-~~~ 328 (419)
|+||+ ..+ +++|+++|++||++||+|++|.. +...+... ..++ +.+++++|+||+| +|.|.|+++ .++
T Consensus 155 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~ 233 (364)
T 1lc5_A 155 PNNPTGLLPERPLLQAIADRCKSLNINLILDEAFID-FIPHETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDD 233 (364)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGG-GSTTCCCSGGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCCH
T ss_pred CCCCCCCCCCHHHHHHHHHHhhhcCcEEEEECcChh-hccCccchhhHhccCCCEEEEEECchhhcCCccceEEEEECCH
Confidence 88874 445 89999999999999999999753 33221100 1112 4678999999998 577889999 766
Q ss_pred CCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEEecCCCcceeE
Q 014724 329 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLV 407 (419)
Q Consensus 329 ~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~~~~t~~hlv 407 (419)
++.+.+.....++ +++....+++..+++. ...+++..+++.++++++.+.|++. |+++.. ....++
T Consensus 234 ------~~~~~l~~~~~~~---~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~~g~~~ 300 (364)
T 1lc5_A 234 ------AAMARMRRQQMPW---SVNALAALAGEVALQD--SAWQQATWHWLREEGARFYQALCQLPLLTVYP--GRANYL 300 (364)
T ss_dssp ------HHHHHHHHHSCTT---CSCHHHHHHHHHGGGC--HHHHHHHHHHHHHHHHHHHHHHHTSTTEEECC--CSSSEE
T ss_pred ------HHHHHHHHhCCCC---CCCHHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHhcCCCCEECC--CCCeEE
Confidence 6777666543322 2233333333333332 1235677788889999999999987 888764 334567
Q ss_pred EEEeC
Q 014724 408 LVDLR 412 (419)
Q Consensus 408 ~vd~~ 412 (419)
|+++.
T Consensus 301 ~~~~~ 305 (364)
T 1lc5_A 301 LLRCE 305 (364)
T ss_dssp EEEES
T ss_pred EEECC
Confidence 88875
No 137
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.84 E-value=1.4e-19 Score=181.73 Aligned_cols=248 Identities=17% Similarity=0.168 Sum_probs=156.3
Q ss_pred ccccccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHH
Q 014724 105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEV 184 (419)
Q Consensus 105 i~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~ 184 (419)
..+..+++++.+.+.+++.. +.+. ..+|...|+ +++...++| +++++++|.+. .++++||++|+..+
T Consensus 30 ~p~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~r~--~~~~~~~l~----~~la~~~g~~~-----~i~~~sG~~a~~~~ 96 (398)
T 1gc0_A 30 PPVYQTATFTFPTVEYGAAC-FAGE-QAGHFYSRI--SNPTLNLLE----ARMASLEGGEA-----GLALASGMGAITST 96 (398)
T ss_dssp CCBCCCSCBCCC-------------------------CCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHH
T ss_pred CCccCCCccccCCHHHHHHh-hcCC-cCCCcccCC--CChHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHH
Confidence 44556677777777777642 2222 113332222 344445554 67888898863 37889999999999
Q ss_pred HHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC-
Q 014724 185 YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP- 263 (419)
Q Consensus 185 ~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p- 263 (419)
+.+++++||+|+++++.|+++..... ......|. ++..++. .|++++++.+++ ++++|++++++||
T Consensus 97 l~~~~~~gd~vl~~~~~~~~~~~~~~----~~~~~~g~--~~~~~~~------~d~~~l~~~i~~-~~~~v~~~~~~npt 163 (398)
T 1gc0_A 97 LWTLLRPGDEVLLGNTLYGCTFAFLH----HGIGEFGV--KLRHVDM------ADLQALEAAMTP-ATRVIYFESPANPN 163 (398)
T ss_dssp HHHHCCTTCEEEEESSCCSHHHHHHH----HTGGGGTC--EEEEECT------TCHHHHHHHCCT-TEEEEEEESSCTTT
T ss_pred HHHHhcCCCEEEEeCCCchhHHHHHH----HHHHHcCC--EEEEECC------CCHHHHHHhcCC-CCeEEEEECCCCCC
Confidence 99999999999999999887642110 00123343 4444432 389999999875 7899999988887
Q ss_pred -CcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC-CCcEEEeCCCCcCCCCC---eeEEEEeCCCcchhhHHH
Q 014724 264 -RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELES 338 (419)
Q Consensus 264 -~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~-~~Div~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~ 338 (419)
...|+++|+++|+++|+++|+|++|..+... .++. ++|+++.|+||+|.||. +|+++++++ .+.+
T Consensus 164 G~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~-----~~~~~~~d~~~~S~sK~~~~~~~~~~G~l~~~~~-----~~~~ 233 (398)
T 1gc0_A 164 MHMADIAGVAKIARKHGATVVVDNTYCTPYLQ-----RPLELGADLVVHSATKYLSGHGDITAGIVVGSQA-----LVDR 233 (398)
T ss_dssp CCCCCHHHHHHHHGGGTCEEEEECTTTHHHHC-----CGGGGTCSEEEEETTTTTTCSSSCCCEEEEECHH-----HHHH
T ss_pred cccccHHHHHHHHHHcCCEEEEECCCcccccC-----CchhhCceEEEECCccccCCCCCCeEEEEEEChH-----HHHH
Confidence 4679999999999999999999998766432 2333 68999999999997664 599988873 2332
Q ss_pred HhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC
Q 014724 339 AINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL 393 (419)
Q Consensus 339 ~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~ 393 (419)
.+.........++.+....++...+++ .+..+.++..+|++.+.+.|++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~l~~~L~~~ 283 (398)
T 1gc0_A 234 IRLQGLKDMTGAVLSPHDAALLMRGIK-----TLNLRMDRHCANAQVLAEFLARQ 283 (398)
T ss_dssp HHHTHHHHHTCCCCCHHHHHHHHHHHT-----THHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHhhccCCCCCCHHHHHHHHhccc-----hHHHHHHHHHHHHHHHHHHHhcC
Confidence 443322110112223222222222222 34566778888999999999875
No 138
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.84 E-value=7.7e-20 Score=184.82 Aligned_cols=286 Identities=13% Similarity=0.092 Sum_probs=181.0
Q ss_pred hhcccccccCC-C--ChHHH--HHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHc-CCCCCCCceeEecC
Q 014724 102 FKSLELIASEN-F--TSRAV--MEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAF-NLDENKWGVNVQPL 175 (419)
Q Consensus 102 ~~~i~L~~sen-~--~~~~V--~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~-g~~~~~~~v~V~~~ 175 (419)
.+.|+|..+++ . .++.+ ++++.+.+......+|+.. .|. .++++.+.+++.+.+ +++++++...++++
T Consensus 47 ~~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~---~g~---~~lr~~ia~~~~~~~~~~~~~~~~~i~~t~ 120 (430)
T 2x5f_A 47 STTYNATIGMATNKDGKMFASSLDAMFNDLTPDEIFPYAPP---QGI---EELRDLWQQKMLRDNPELSIDNMSRPIVTN 120 (430)
T ss_dssp TCSEECCCSSCEETTEECCCHHHHTTBSSCCGGGTSSCCCT---TCC---HHHHHHHHHHHHHHCTTCCGGGBCCCEEES
T ss_pred CCcEEeeeeeccCCCCchhhHHHHHHHHhcCcccccccCCC---CCC---HHHHHHHHHHHhccCcccCCCccceEEEcC
Confidence 45678877766 2 35666 7777666533112244321 122 355544444444432 55553200024444
Q ss_pred ChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccc-cccccEEEecccCCCCCCCCHHHHHHHhhhc--CC
Q 014724 176 SGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSG-TSIYFESMPYRLDESTGLVDYDMLEKTAILF--RP 252 (419)
Q Consensus 176 sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~-~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~--~p 252 (419)
+|++|+..++.++++|||+|++.+|.|.++.. .+.. .|. +++.++++++++.+|+++|++.+++. ++
T Consensus 121 g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~--------~~~~~~g~--~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~ 190 (430)
T 2x5f_A 121 ALTHGLSLVGDLFVNQDDTILLPEHNWGNYKL--------VFNTRNGA--NLQTYPIFDKDGHYTTDSLVEALQSYNKDK 190 (430)
T ss_dssp HHHHHHHHHHHHHCCTTCEEEEESSCCTHHHH--------HHTTTTCC--EEEEECCBCTTSCBCSHHHHHHHHHCCSSE
T ss_pred CchHHHHHHHHHHhCCCCEEEEcCCcCccHHH--------HHHHhcCC--eEEEEeccCccCCcCHHHHHHHHHhcCCCC
Confidence 45789999999999999999999998877642 2233 454 45555555434679999999998753 67
Q ss_pred eEEEEcCCCCCC--cCC---hHHHHHHHHH-----hCCEEEEeccccccccccCC-cCC---CC---CCC---cEEEeCC
Q 014724 253 KLIIAGASAYPR--DFD---YPRMRQIADA-----VGALLMMDMAHISGLVAASV-VAD---PF---KYC---DVVTTTT 312 (419)
Q Consensus 253 klIi~~~s~~p~--~~d---l~~I~~ia~~-----~ga~livD~ah~~Gl~~~g~-~~~---~~---~~~---Div~~S~ 312 (419)
++|++++|+||+ ..+ +++|.++|++ ||++||+|++|. ++.+.+. ... .+ ... +++++|+
T Consensus 191 ~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 269 (430)
T 2x5f_A 191 VIMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYY-GLFYEDVYTQSLFTALTNLHSNAILPIRLDGA 269 (430)
T ss_dssp EEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTT-TCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEH
T ss_pred EEEEEcCCCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcc-cccCCcccchHHHHHHhhccCCcceEEEEEec
Confidence 899999999885 445 7899999999 999999999974 3333322 111 11 134 5789999
Q ss_pred CCcC--CCCCeeEEEE---eCCCcchhhHHHHhhhcccC----CCCCCChHHHHHHHHHHHH-Hhc-ChHHHHHHHHHHH
Q 014724 313 HKSL--RGPRGGMIFF---KKDPVLGVELESAINNAVFP----GLQGGPHNHTIGGLAVCLK-HAQ-SPEFKVYQNKVVS 381 (419)
Q Consensus 313 hK~l--~GprgG~i~~---~~~~~~~~~l~~~i~~~~~~----~~~g~p~~~~iaala~al~-~~~-~~~~~~~~~~v~~ 381 (419)
||+| +|.|.|++++ ++ ++.+.+...... ... +++....+++..+++ ... .++.++..+++.+
T Consensus 270 sK~~~~~G~riG~~~~~~~~~------~~~~~l~~~~~~~~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 342 (430)
T 2x5f_A 270 TKEFFAWGFRVGFMTFGTSDQ------TTKEVLEAKVKGLIRSNIS-SGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLKE 342 (430)
T ss_dssp HHHTTCGGGCCEEEEEBCCCH------HHHHHHHHHHHHHHHTTTS-SCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCCCeEEEEEecCCH------HHHHHHHHHHhhhhhcccC-CCChHHHHHHHHHHccChHHHHHHHHHHHHHHH
Confidence 9988 5678899999 65 566655432221 112 233334444444555 310 1223347788889
Q ss_pred HHHHHHHHHH----hCCcEEecCCCcceeEEEEeC
Q 014724 382 NCRALASRLV----ELGYKLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 382 n~~~l~~~L~----~~G~~v~~~~t~~hlv~vd~~ 412 (419)
+++++.+.|+ +.|+++..+ ..+.++|+++.
T Consensus 343 ~~~~l~~~L~~~~~~~g~~~~~~-~~g~~~~~~~~ 376 (430)
T 2x5f_A 343 RYEVTKEVVYADQYHSHWQAYDF-NSGYFMAIKVH 376 (430)
T ss_dssp HHHHHHHHHTCGGGTTTEEECCC-CBSSEEEEEES
T ss_pred HHHHHHHHHHhhCCCCCceeeCC-CceEEEEeCCC
Confidence 9999999998 678877643 33456888886
No 139
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.84 E-value=5.3e-20 Score=182.88 Aligned_cols=272 Identities=11% Similarity=0.027 Sum_probs=183.6
Q ss_pred hcccccccCCCChHHHHHHHhhhhhccCCCCCCCCC---CCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEec--CCh
Q 014724 103 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKR---YYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQP--LSG 177 (419)
Q Consensus 103 ~~i~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r---~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~--~sG 177 (419)
+.++|.|++..+|+.|++++...+.+.+ +++.+. ...+.++.+.++ .+++.+++++|++.+ -+|++ .+|
T Consensus 5 ~~~~f~pgpt~~~~~V~~a~~~~~~~~~--~~~~s~~~~~hr~~~~~~~~~-~~r~~la~ll~~~~~---~~v~f~t~~~ 78 (361)
T 3m5u_A 5 RKINFSAGPSTLPLEILEQAQKELCDYQ--GRGYSIMEISHRTKVFEEVHF-GAQEKAKKLYELNDD---YEVLFLQGGA 78 (361)
T ss_dssp CCEECCSSSCCCCHHHHHHHHHTSSSGG--GSSSCGGGSCSSSHHHHHHHH-HHHHHHHHHHTCCTT---EEEEEESSHH
T ss_pred ceEeecCCCCCCcHHHHHHHHHHHHhcc--cCCceeeccCCCCHHHHHHHH-HHHHHHHHHhCCCCC---ceEEEEcCcH
Confidence 5678999999999999999999886544 233321 123556666666 688999999999642 13444 556
Q ss_pred HHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCC--CCHHHHHHHhhhcCCeEE
Q 014724 178 SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGL--VDYDMLEKTAILFRPKLI 255 (419)
Q Consensus 178 t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~--iD~d~Le~~l~~~~pklI 255 (419)
|+++++++.+++ +||+++...- +++++.+. ......|..++.++ ++. ++. ++++. + +.+ ++++|
T Consensus 79 T~a~n~~~~~~~-~~~~~~~i~~---~~~~~~~~---~~a~~~G~~v~~~~--~~~-~g~~~~~~~~-~--l~~-~t~lv 144 (361)
T 3m5u_A 79 SLQFAMIPMNLA-LNGVCEYANT---GVWTKKAI---KEAQILGVNVKTVA--SSE-ESNFDHIPRV-E--FSD-NADYA 144 (361)
T ss_dssp HHHHHHHHHHHC-CSSCEEEEEC---SHHHHHHH---HHHHHTTCCEEEEE--ECT-TTTSCSCCCC-C--CCT-TSSEE
T ss_pred HHHHHHHHHhcC-CCCeEEEEeC---CHHHHHHH---HHHHHcCCceEEEe--ccc-CcCCCcCChh-h--cCC-CCCEE
Confidence 889999999999 8997754432 23333221 11123455455555 443 332 56666 4 654 78988
Q ss_pred EEcCCCC--CCcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCCCCcEEEeCCCCcCCCCCe-eEEEEeCCCcc
Q 014724 256 IAGASAY--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVL 332 (419)
Q Consensus 256 i~~~s~~--p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~~~Div~~S~hK~l~Gprg-G~i~~~~~~~~ 332 (419)
.+.+..+ ++..|. |++ +|+++++|++|..|.. +.+++..|++++|.||++ ||.| |+++.++
T Consensus 145 ~~~~~e~~tG~~~~~-----i~~-~~~~~~vD~~q~~g~~-----~id~~~~d~~~~s~~K~~-gp~G~g~l~~~~---- 208 (361)
T 3m5u_A 145 YICSNNTIYGTQYQN-----YPK-TKTPLIVDASSDFFSR-----KVDFSNIALFYGGVQKNA-GISGLSCIFIRK---- 208 (361)
T ss_dssp EEESEETTTTEECSS-----CCC-CSSCEEEECGGGTTSS-----CCCCTTEEEEEEETTTTS-SCTTCEEEEEEH----
T ss_pred EEeCCCCCcceeCCc-----ccc-cCCEEEEEcccccCCC-----CCCcccCCEEEEechhcc-CCCccEEEEEcH----
Confidence 8766555 444441 444 4999999999987743 333446899999999999 7998 9999887
Q ss_pred hhhHHHHhhh----c--------ccCCCCCCChHHHHHHHHHHHHHhcCh-HHHHHHHHHHHHHHHHHHHHHhCC-c-EE
Q 014724 333 GVELESAINN----A--------VFPGLQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVELG-Y-KL 397 (419)
Q Consensus 333 ~~~l~~~i~~----~--------~~~~~~g~p~~~~iaala~al~~~~~~-~~~~~~~~v~~n~~~l~~~L~~~G-~-~v 397 (419)
++.+++.. . ......++|+...+.++..|++.+.+. ++++..++..++++++++.|++.| + .+
T Consensus 209 --~~~~~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L~~~~g~~~~ 286 (361)
T 3m5u_A 209 --DMLERSKNKQIPSMLNYLTHAENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECIDLSNGFYKG 286 (361)
T ss_dssp --HHHHHHHTCCCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHTSTTSEEE
T ss_pred --HHHhhhcCCCCCceeehHHHhhcCCCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCeeec
Confidence 34433321 0 011223678888999999999988876 689999999999999999999986 5 55
Q ss_pred ecCC--CcceeEEEEeC
Q 014724 398 VSGG--SDNHLVLVDLR 412 (419)
Q Consensus 398 ~~~~--t~~hlv~vd~~ 412 (419)
..+. ...+++.+.+.
T Consensus 287 ~~~~~~rs~~ivsf~~~ 303 (361)
T 3m5u_A 287 HADKKDRSLMNVSFNIA 303 (361)
T ss_dssp SSCGGGBCSSEEEEEES
T ss_pred cCCHHHcCCeEEEEECC
Confidence 4321 11345666654
No 140
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.83 E-value=6.3e-19 Score=182.12 Aligned_cols=277 Identities=13% Similarity=0.049 Sum_probs=177.6
Q ss_pred CChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHc----
Q 014724 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI---- 188 (419)
Q Consensus 113 ~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~al---- 188 (419)
.+++.|++++.....|.... .+.......++|+.+++++++++|++..++ .+++++||+||+.++.++
T Consensus 111 ~~~~~v~~~~~~~~~n~~~~------~~~~~~~~~~le~~~~~~la~~~g~~~~~~--~~~t~ggt~a~~~al~~ar~~~ 182 (497)
T 2qma_A 111 PLMPAVAAEAMIAALNQSMD------SWDQASSATYVEQKVVNWLCDKYDLSEKAD--GIFTSGGTQSNQMGLMLARDWI 182 (497)
T ss_dssp CBHHHHHHHHHHHHHCCCTT------CGGGCHHHHHHHHHHHHHHHHHTTCCTTCE--EEEESSHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHhhccccc------chhhChHHHHHHHHHHHHHHHHhCCCCCCC--eEEcCCchHHHHHHHHHHHHHH
Confidence 46788988886655443111 122224567899999999999999975222 366677899999888773
Q ss_pred c---------CC------CC-EEEEeCCCCCccccCcccccccccccccccc-EEEecccCCCCCCCCHHHHHHHhhhc-
Q 014724 189 L---------KP------HD-RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYF-ESMPYRLDESTGLVDYDMLEKTAILF- 250 (419)
Q Consensus 189 l---------~p------GD-~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~-~~v~~~~~~~~~~iD~d~Le~~l~~~- 250 (419)
+ ++ || .|++.++.|.++. +.+...|.+. +++.++++ +++.+|+++|++.+++.
T Consensus 183 ~~~~~~~~~~~~G~~~~~g~~~v~~s~~~h~s~~--------~~~~~~g~g~~~v~~v~~~-~~~~~d~~~L~~~i~~~~ 253 (497)
T 2qma_A 183 ADKLSGHSIQKLGLPDYADKLRIVCSKKSHFTVQ--------KSASWMGLGEKAVMTVDAN-ADGTMDITKLDEVIAQAK 253 (497)
T ss_dssp HHHHHCCCHHHHCSCGGGGGEEEEEETTSCTHHH--------HHHHHTTSCGGGEEEECBC-TTSSBCGGGHHHHHHHHH
T ss_pred HHhhcccchhhcccccccCCeEEEECCCchHHHH--------HHHHHcCCCcccEEEEecC-CCCcCCHHHHHHHHHHHH
Confidence 3 13 46 7888887776543 1233444422 34444455 46899999999998753
Q ss_pred --C--CeEEEEcCCCCC--CcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCC---CCCCcEEEeCCCCcCCCCC-
Q 014724 251 --R--PKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADP---FKYCDVVTTTTHKSLRGPR- 320 (419)
Q Consensus 251 --~--pklIi~~~s~~p--~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~---~~~~Div~~S~hK~l~Gpr- 320 (419)
. |.+|++..++|+ ...|+++|+++|++||++|++|++|..+..... .... ++++|++++|+||++.+|.
T Consensus 254 ~~~~~~~~vv~~~~~~~tG~~~~l~~I~~l~~~~~~~l~vD~a~~~~~~~~~-~~~~~~gi~~~D~i~~s~hK~l~~p~~ 332 (497)
T 2qma_A 254 AEGLIPFAIVGTAGTTDHGAIDDLDFIADMAVKHDMWMHVDGAYGGALILSS-HKSRLKGVERAHSISVDFHKLFYQTIS 332 (497)
T ss_dssp HTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGST-TGGGGTTGGGCSEEEEETTTTTCCCSS
T ss_pred HCCCcceEEEEcCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhhHHHHhCc-chHhhcCcccCCEEEEcchhccCCCcc
Confidence 2 346776655554 578999999999999999999999865543222 1111 2267999999999997774
Q ss_pred eeEEEEeCCCcchhhHHHHhhhcccCCCCC----CChHHH----------HHHHHHHHHHhcChHHHHHHHHHHHHHHHH
Q 014724 321 GGMIFFKKDPVLGVELESAINNAVFPGLQG----GPHNHT----------IGGLAVCLKHAQSPEFKVYQNKVVSNCRAL 386 (419)
Q Consensus 321 gG~i~~~~~~~~~~~l~~~i~~~~~~~~~g----~p~~~~----------iaala~al~~~~~~~~~~~~~~v~~n~~~l 386 (419)
.|+++++++ ...+.+... ..++.+ .+.... ..++..+++.+..++++++.+++.+++++|
T Consensus 333 ~G~l~~~~~-----~~~~~~~~~-~~yl~~~~~~~~~~~~~~~~~~r~~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l 406 (497)
T 2qma_A 333 CGALLVNDK-----SNFKFLLHH-ADYLNREHDELPNLVDKSIATTKRFDALKVFMTMQNVGPKALGDMYDHLLAQTLEV 406 (497)
T ss_dssp CEEEEESCG-----GGGGGGCC---------------------CCSCCCTHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCH-----HHHHHhcCC-chhcCCccccCCCccccCCCCCCchhHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 588888764 222222110 001100 011100 112233555554456678889999999999
Q ss_pred HHHHHhC-CcEEecCCCcceeEEEEeCCc
Q 014724 387 ASRLVEL-GYKLVSGGSDNHLVLVDLRPM 414 (419)
Q Consensus 387 ~~~L~~~-G~~v~~~~t~~hlv~vd~~~~ 414 (419)
.+.|++. |++++.. ....++++++.+.
T Consensus 407 ~~~L~~~~~~~~~~~-~~~~~v~f~~~~~ 434 (497)
T 2qma_A 407 ADMIRTNDQFELLAE-PSLSTVLFRATHE 434 (497)
T ss_dssp HHHHHTCTTEEECSC-CSSSEEEEEECCS
T ss_pred HHHHhhCCCeEEEcC-CCceEEEEEEcCC
Confidence 9999986 8988642 3456788887653
No 141
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.83 E-value=1.3e-19 Score=177.43 Aligned_cols=271 Identities=13% Similarity=0.093 Sum_probs=175.1
Q ss_pred cccccccCC-CChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHH
Q 014724 104 SLELIASEN-FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF 182 (419)
Q Consensus 104 ~i~L~~sen-~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~ 182 (419)
.|.|..+.+ .+++.|++++.+.+. .|..+. +.. ++.+.+++++++++|.+++ ..+++++|++|+.
T Consensus 15 ~i~l~~~~~~~~~~~v~~a~~~~~~-~~~~~~------g~~----~~~~~~~~~l~~~~g~~~~---~v~~~~g~t~a~~ 80 (359)
T 1svv_A 15 PYSFVNDYSVGMHPKILDLMARDNM-TQHAGY------GQD----SHCAKAARLIGELLERPDA---DVHFISGGTQTNL 80 (359)
T ss_dssp CEECSCSCSSCCCHHHHHHHHHHTT-CCCCST------TCS----HHHHHHHHHHHHHHTCTTS---EEEEESCHHHHHH
T ss_pred eEEecCCCcCCCCHHHHHHHHHHHh-hccccc------ccc----HHHHHHHHHHHHHhCCCCc---cEEEeCCchHHHH
Confidence 456655443 478999999998875 232211 111 3445567889999997764 2245567789999
Q ss_pred HHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhc------CCeEEE
Q 014724 183 EVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF------RPKLII 256 (419)
Q Consensus 183 ~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~------~pklIi 256 (419)
.++.++++|||+|++.++.|.++.... .+...|. +++.++.+ ++.+|+++|++.+++. ++++|+
T Consensus 81 ~~~~~~~~~gd~vl~~~~~~~~~~~~~------~~~~~g~--~~~~v~~~--~~~~d~~~l~~~l~~~~~~~~~~~~~v~ 150 (359)
T 1svv_A 81 IACSLALRPWEAVIATQLGHISTHETG------AIEATGH--KVVTAPCP--DGKLRVADIESALHENRSEHMVIPKLVY 150 (359)
T ss_dssp HHHHHHCCTTEEEEEETTSHHHHSSTT------HHHHTTC--CEEEECCT--TSCCCHHHHHHHHHHSCSTTSCEEEEEE
T ss_pred HHHHHHhCCCCEEEEcccchHHHHHHH------HHhcCCC--eeEEEeCC--CCeecHHHHHHHHHHHHhccCCCceEEE
Confidence 999999999999999999887664210 1234455 44444443 5789999999999764 288998
Q ss_pred EcCCCC-CCcCC---hHHHHHHHHHhCCEEEEeccc---cccccccCCcCCCC---CCCcEEEeCCCCcCCCCCe-eEEE
Q 014724 257 AGASAY-PRDFD---YPRMRQIADAVGALLMMDMAH---ISGLVAASVVADPF---KYCDVVTTTTHKSLRGPRG-GMIF 325 (419)
Q Consensus 257 ~~~s~~-p~~~d---l~~I~~ia~~~ga~livD~ah---~~Gl~~~g~~~~~~---~~~Div~~S~hK~l~Gprg-G~i~ 325 (419)
+++++. +...+ +++|.++|++||++||+|++| ..|.. +.....+ ..+|+++.|+||+ .+|.+ |+++
T Consensus 151 ~~~~~ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~~~~~~d~~~~s~~K~-g~~~~~g~l~ 227 (359)
T 1svv_A 151 ISNTTEVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSP--VNDLTLADIARLTDMFYIGATKA-GGMFGEALII 227 (359)
T ss_dssp EESSCTTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTST--TCCCCHHHHHHHCSEEEEECTTT-TCSSCEEEEE
T ss_pred EEcCCCCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCC--CcchhhhhhhhcCCEEEEecccC-CCCCceEEEE
Confidence 887731 34555 889999999999999999997 22221 1101111 1478999999996 56766 8888
Q ss_pred EeCCCcchhhHHHHhhhcc--cCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCc
Q 014724 326 FKKDPVLGVELESAINNAV--FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSD 403 (419)
Q Consensus 326 ~~~~~~~~~~l~~~i~~~~--~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~ 403 (419)
.+++ +.+.+.... .....+. .....++++.+ +...++++..+++.++++++.+.|+..|+++..+ ..
T Consensus 228 ~~~~------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~ 296 (359)
T 1svv_A 228 LNDA------LKPNARHLIKQRGALMAK-GWLLGIQFEVL---MKDNLFFELGAHSNKMAAILKAGLEACGIRLAWP-SA 296 (359)
T ss_dssp CSGG------GCTTHHHHHHHTTCCCTT-THHHHHHHHHH---TSTTHHHHHHHHHHHHHHHHHHHHHHTTCCBSSC-CS
T ss_pred Eccc------HHHHHHHHHhcCCccccc-chhhHHHHHHH---HhhhhHHHHHHHHHHHHHHHHHHhccCCeEEccC-Cc
Confidence 8763 333332211 1111111 11222222212 2233467788899999999999996578887642 34
Q ss_pred ceeEEEEeC
Q 014724 404 NHLVLVDLR 412 (419)
Q Consensus 404 ~hlv~vd~~ 412 (419)
.+++|+++.
T Consensus 297 ~~~~~~~~~ 305 (359)
T 1svv_A 297 SNQLFPILE 305 (359)
T ss_dssp SSEECBEEE
T ss_pred cceEEEEcC
Confidence 667777653
No 142
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.83 E-value=1e-19 Score=196.89 Aligned_cols=223 Identities=14% Similarity=0.105 Sum_probs=158.9
Q ss_pred HHHHHHHHcCCCCCCCceeEecCChH-HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEeccc
Q 014724 153 CQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 231 (419)
Q Consensus 153 ~~~~la~~~g~~~~~~~v~V~~~sGt-~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~ 231 (419)
+++.+++++|.+. .+++++|+ .||.+++.++++|||+|+++.+.|.++.. .+...|+. ++.++.
T Consensus 210 ~ee~la~l~G~d~-----~i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~--------~~~~~G~~--~v~v~~ 274 (755)
T 2vyc_A 210 SEKYAARVFGADR-----SWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQ--------GLMLTGAK--PVYMVP 274 (755)
T ss_dssp HHHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHH--------HHHHHCCE--EEEECC
T ss_pred HHHHHHHHhCCCc-----eEEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHH--------HHHHcCCE--EEEEeC
Confidence 4578889999875 25677775 79999999999999999999998876542 23345654 343333
Q ss_pred CCCC----CCC-----CHHHHHHHhhhc-CC--------eEEEEcCCCC-CCcCChHHHHHHHHHhCCEEEEeccccccc
Q 014724 232 DEST----GLV-----DYDMLEKTAILF-RP--------KLIIAGASAY-PRDFDYPRMRQIADAVGALLMMDMAHISGL 292 (419)
Q Consensus 232 ~~~~----~~i-----D~d~Le~~l~~~-~p--------klIi~~~s~~-p~~~dl~~I~~ia~~~ga~livD~ah~~Gl 292 (419)
+.++ +.+ |+++|++++++. ++ +++++++|++ +...|+++|+++|++||++|++|+||+.++
T Consensus 275 ~~~~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~pn~~G~v~dl~~I~~ia~~~~~~livDeA~~~~~ 354 (755)
T 2vyc_A 275 SRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYA 354 (755)
T ss_dssp CBCTTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESSCTTSEEECHHHHHHHHTTTCSEEEEECTTCTTG
T ss_pred CCCccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECCCCCceecCHHHHHHHHHHcCCEEEEECcCchhc
Confidence 3222 235 999999999752 23 4888777753 567899999999999999999999997654
Q ss_pred cccCCc--CCCCCC--CcE------EEeCCCCcCCCCC-eeEEEEeCC--CcchhhHHHHhhhcccCCCCCCChHHHHHH
Q 014724 293 VAASVV--ADPFKY--CDV------VTTTTHKSLRGPR-GGMIFFKKD--PVLGVELESAINNAVFPGLQGGPHNHTIGG 359 (419)
Q Consensus 293 ~~~g~~--~~~~~~--~Di------v~~S~hK~l~Gpr-gG~i~~~~~--~~~~~~l~~~i~~~~~~~~~g~p~~~~iaa 359 (419)
.+.+.. .+++.+ +|+ +++|+||+++||+ +|+++.+++ .. + ...++........++|+...+++
T Consensus 355 ~~~~~~~~~~~~~g~~aD~~~~~~iv~~S~hK~L~g~~~g~~i~~~~~~~~i---~-~~~~~~~~~~~~s~sp~~~~iaa 430 (755)
T 2vyc_A 355 RFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAI---N-FSRFNQAYMMHATTSPLYAICAS 430 (755)
T ss_dssp GGCGGGTTSSSSCSCCCCCSSBEEEEEEETTTSSSCCTTCEEEEEECCBTCC---C-HHHHHHHHHHTSCSSCCHHHHHH
T ss_pred ccCcccCCcchhcCCcCCccCCCeEEEECccccccCcCCeeeeeecCccccc---C-HHHHHHHHHHhCCCCHHHHHHHH
Confidence 433221 122234 565 9999999999997 588888764 11 1 11222221112246788888999
Q ss_pred HHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-C
Q 014724 360 LAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-G 394 (419)
Q Consensus 360 la~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G 394 (419)
+.+|++.+..++.+++.+++.++++++++.|+++ |
T Consensus 431 l~aA~~~l~~~gg~~~~~~~~~~a~~~r~~L~~l~~ 466 (755)
T 2vyc_A 431 NDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYK 466 (755)
T ss_dssp HHHHHHHHSTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccc
Confidence 9988888775546788999999999999999875 5
No 143
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.83 E-value=2.9e-19 Score=176.46 Aligned_cols=229 Identities=13% Similarity=0.097 Sum_probs=154.5
Q ss_pred HHHHHHHcCCCCCCCceeEecCCh-HHHHHHHHHHccCCC-CEEEEeCCCCCccccCccccccccccccccccEEEeccc
Q 014724 154 QKRALAAFNLDENKWGVNVQPLSG-SPANFEVYTAILKPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 231 (419)
Q Consensus 154 ~~~la~~~g~~~~~~~v~V~~~sG-t~A~~~~~~all~pG-D~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~ 231 (419)
++.+++++|++++ +|++++| ++|+..++.++++|| |+|++++|.|.++.. .+...|. +++.++.
T Consensus 64 r~~la~~~~~~~~----~v~~~~G~~~ai~~~~~~~~~~g~d~Vl~~~p~~~~~~~--------~~~~~g~--~~~~v~~ 129 (356)
T 1fg7_A 64 IENYAQYAGVKPE----QVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSV--------SAETIGV--ECRTVPT 129 (356)
T ss_dssp HHHHHHHHTSCGG----GEEEESHHHHHHHHHHHHHCCTTTCEEEECSSSCTHHHH--------HHHHHTC--EEEECCC
T ss_pred HHHHHHHhCCChH----HEEEcCCHHHHHHHHHHHHhCCCCCEEEEeCCChHHHHH--------HHHHcCC--EEEEeeC
Confidence 4667788898764 3666666 679999999999999 999999998877542 1233454 4555555
Q ss_pred CCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCCh---HHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--C
Q 014724 232 DESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDY---PRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--Y 304 (419)
Q Consensus 232 ~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~dl---~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~ 304 (419)
+ +++.+|++++++.++ ++|+|++++|+||+ ..+. ++|+++|+ +|++||+|++|.. +.........++ .
T Consensus 130 ~-~~~~~d~~~l~~~i~--~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~~~~li~De~~~~-~~~~~~~~~~~~~~~ 204 (356)
T 1fg7_A 130 L-DNWQLDLQGISDKLD--GVKVVYVCSPNNPTGQLINPQDFRTLLELTR-GKAIVVADEAYIE-FCPQASLAGWLAEYP 204 (356)
T ss_dssp C-TTSCCCHHHHHTSCT--TEEEEEEESSCTTTCCCCCHHHHHHHHHHHT-TTCEEEEECTTGG-GSGGGCSGGGTTTCT
T ss_pred C-CCCCCCHHHHHHHhc--CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCCEEEEEccchh-hcCCCcHHHHHhhCC
Confidence 5 356899999999886 78999999999985 4454 45555566 8999999999753 221111111112 3
Q ss_pred CcEEEeCCCCcC--CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHH
Q 014724 305 CDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSN 382 (419)
Q Consensus 305 ~Div~~S~hK~l--~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n 382 (419)
.+++++|+||+| +|+|.|++++++ ++.+.+.....++ +++....++...++.....+.+++..+++.++
T Consensus 205 ~~i~~~s~sK~~g~~G~r~G~~~~~~------~~~~~l~~~~~~~---~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 275 (356)
T 1fg7_A 205 HLAILRTLSKAFALAGLRCGFTLANE------EVINLLMKVIAPY---PLSTPVADIAAQALSPQGIVAMRERVAQIIAE 275 (356)
T ss_dssp TEEEEEESSSTTCCGGGCCEEEEECH------HHHHHHHHHSCSS---CSCHHHHHHHHHHTSHHHHHHHHHHHHHHHHH
T ss_pred CEEEEecchHhhcCchhhhEEEEeCH------HHHHHHHHhcCCC---CCCHHHHHHHHHHhcCccHHHHHHHHHHHHHH
Confidence 568999999987 678889999976 6777776543332 22222333333344321101156777888999
Q ss_pred HHHHHHHHHhCC--cEEecCCCcceeEEEEeC
Q 014724 383 CRALASRLVELG--YKLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 383 ~~~l~~~L~~~G--~~v~~~~t~~hlv~vd~~ 412 (419)
++++.+.|++.| +.+.+ ...+++|+++.
T Consensus 276 ~~~l~~~L~~~~~~~~~~~--~~~~~~~~~~~ 305 (356)
T 1fg7_A 276 REYLIAALKEIPCVEQVFD--SETNYILARFK 305 (356)
T ss_dssp HHHHHHHHHHSTTEEEECC--CSSSEEEEEET
T ss_pred HHHHHHHHHhCCCceEECC--CCCeEEEEECC
Confidence 999999999986 44443 34567888874
No 144
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.83 E-value=4e-20 Score=198.82 Aligned_cols=234 Identities=14% Similarity=0.092 Sum_probs=162.5
Q ss_pred HHHHHHHHcCCCCCCCceeEecCChH-HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEeccc
Q 014724 153 CQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 231 (419)
Q Consensus 153 ~~~~la~~~g~~~~~~~v~V~~~sGt-~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~ 231 (419)
+++.++++||.+. . +++++|+ .||.+++.++++|||+|+++.+.|.++.. + .+...|+....++...
T Consensus 178 ~e~~lA~~~gae~----~-i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~-~------~~~l~Ga~~v~v~~~~ 245 (730)
T 1c4k_A 178 AEKHAARVYNADK----T-YFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYN-S------ALAMAGGRPVYLQTNR 245 (730)
T ss_dssp HHHHHHHHTTCSE----E-EEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHH-H------HTTTTCCEEEEECEEE
T ss_pred HHHHHHHHHCCCc----E-EEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHH-H------HHHHCCCEEEEEeCCc
Confidence 4578899999976 2 6677775 79999999999999999999998876642 1 0334565433333221
Q ss_pred CCC--CCCCCHHHH-----HHHhhhcC-----C----eEEEEcCCCC-CCcCChHHHHHHHHHhCCEEEEeccccccccc
Q 014724 232 DES--TGLVDYDML-----EKTAILFR-----P----KLIIAGASAY-PRDFDYPRMRQIADAVGALLMMDMAHISGLVA 294 (419)
Q Consensus 232 ~~~--~~~iD~d~L-----e~~l~~~~-----p----klIi~~~s~~-p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~ 294 (419)
+.- .+.+|+++| ++++++.+ + |+|++++|++ +...|+++|+++|+++|++|++|+||+.++.+
T Consensus 246 ~~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~pn~~G~v~dl~~I~~la~~~g~~livDeAh~~~~~f 325 (730)
T 1c4k_A 246 NPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLGTYDGTIYNAHEVVKRIGHLCDYIEFDSAWVGYEQF 325 (730)
T ss_dssp CTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESBCTTSEEECHHHHHHHHGGGBSEEEEECTTCCGGGS
T ss_pred cccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECCCCCCeecCHHHHHHHHHHcCCeEEEEccccccccc
Confidence 100 134788888 88886531 3 8888887764 46789999999999999999999999766544
Q ss_pred cCCcC--CCCC----CCc----EEEeCCCCcCCCCCe-eEEEEeCCCcc----hhhHHHHhhhcccCCCCCCChHHHHHH
Q 014724 295 ASVVA--DPFK----YCD----VVTTTTHKSLRGPRG-GMIFFKKDPVL----GVELESAINNAVFPGLQGGPHNHTIGG 359 (419)
Q Consensus 295 ~g~~~--~~~~----~~D----iv~~S~hK~l~Gprg-G~i~~~~~~~~----~~~l~~~i~~~~~~~~~g~p~~~~iaa 359 (419)
.+..+ +++. ++| ++++|+||+|+||++ |+++.+++... ..+ ...++........++|+...+++
T Consensus 326 ~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~g~~~gg~I~v~~~~l~g~~~~i~-~~~~~~~~~~~~stsp~~~~iaa 404 (730)
T 1c4k_A 326 IPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFSQTSQIHKKDSHIKGQLRYCD-HKHFNNSFNLFMSTSPFYPMYAA 404 (730)
T ss_dssp SGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCTTCEEEEEECGGGTTSTTCCC-HHHHHHHHHHHSCSSCCHHHHHH
T ss_pred CcccCCcCcccccccCCCCCCEEEEECCCCCCCCCCCEEEEEecchhhcCcccccC-HHHHHHHHHHhCCCCCcHHHHHH
Confidence 32111 2332 577 999999999999875 77777664110 000 12222221112245777888888
Q ss_pred HHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHh--CCcEEec
Q 014724 360 LAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE--LGYKLVS 399 (419)
Q Consensus 360 la~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~--~G~~v~~ 399 (419)
+..|+..+..++..++.++..++++++++.|++ .|++++.
T Consensus 405 l~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~ 446 (730)
T 1c4k_A 405 LDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFV 446 (730)
T ss_dssp HHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESS
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEcc
Confidence 888887765434677889999999999999998 5998864
No 145
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.83 E-value=6.8e-19 Score=179.68 Aligned_cols=233 Identities=17% Similarity=0.098 Sum_probs=160.2
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccc
Q 014724 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (419)
Q Consensus 142 g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g 221 (419)
+++...++| +++++++|.+. .++++||++|+..++.+++++||+|+++++.|++...... ..+...|
T Consensus 112 ~~~~~~~l~----~~lA~l~g~~~-----~v~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~----~~~~~~G 178 (445)
T 1qgn_A 112 GNPTTVVLE----EKISALEGAES-----TLLMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIE----TILPKMG 178 (445)
T ss_dssp CCHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHH----HTGGGGT
T ss_pred CChHHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHH----HHHHHcC
Confidence 344445554 67888899863 4788999999999999999999999999988876532100 0122345
Q ss_pred cccEEEecccCCCCCCCCHHHHHHHhhhcCC-eEEEEcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCc
Q 014724 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRP-KLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV 298 (419)
Q Consensus 222 ~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~p-klIi~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~ 298 (419)
. ++..++. .|+++|++.+++ ++ |+|++++++||+ ..|+++|+++|+++|++|++|++|..+..
T Consensus 179 ~--~v~~v~~------~d~~~l~~ai~~-~tv~lV~le~p~NptG~v~dl~~I~~la~~~g~~livD~a~~~~~~----- 244 (445)
T 1qgn_A 179 I--TATVIDP------ADVGALELALNQ-KKVNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFATPLN----- 244 (445)
T ss_dssp C--EEEEECS------SCHHHHHHHHHH-SCEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTT-----
T ss_pred C--EEEEeCC------CCHHHHHHHhcc-CCCCEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCccccc-----
Confidence 4 4444433 289999999986 67 999999999884 67999999999999999999999876532
Q ss_pred CCCCC-CCcEEEeCCCCcCCCCC---eeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHH
Q 014724 299 ADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKV 374 (419)
Q Consensus 299 ~~~~~-~~Div~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~ 374 (419)
..+++ ++|++++|+||++.|+. +|++++++ ++.+.+....... .+.+.... +. .++..+ +.+..
T Consensus 245 ~~~~~~g~Div~~S~sK~~gg~gd~~~G~l~~~~------~l~~~l~~~~~~~-g~~~~~~~--a~-~~~~~l--~~l~~ 312 (445)
T 1qgn_A 245 QKALALGADLVLHSATKFLGGHNDVLAGCISGPL------KLVSEIRNLHHIL-GGALNPNA--AY-LIIRGM--KTLHL 312 (445)
T ss_dssp CCTTTTTCSEEEECTTTTTTCSSSCCCEEEEECH------HHHHHHHHHHHHH-CCCCCHHH--HH-HHHHHG--GGHHH
T ss_pred CCccccCCEEEEECCcccccccccceEEEEEECH------HHHHHHHHHHHHh-CCCCCHHH--HH-HHHHhH--HHHHH
Confidence 23444 79999999999997764 89999987 5655554322111 11122211 11 122222 23455
Q ss_pred HHHHHHHHHHHHHHHHHhC-Cc-EEecCC---------------CcceeEEEEeCC
Q 014724 375 YQNKVVSNCRALASRLVEL-GY-KLVSGG---------------SDNHLVLVDLRP 413 (419)
Q Consensus 375 ~~~~v~~n~~~l~~~L~~~-G~-~v~~~~---------------t~~hlv~vd~~~ 413 (419)
+.+++.++++++.+.|++. ++ .+...+ ...+++.+++..
T Consensus 313 r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~ 368 (445)
T 1qgn_A 313 RVQQQNSTALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDG 368 (445)
T ss_dssp HHHHHHHHHHHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESS
T ss_pred HHHHHHHHHHHHHHHHhcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEECC
Confidence 6677888899999999986 55 343221 135678888753
No 146
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.83 E-value=8.6e-19 Score=180.46 Aligned_cols=273 Identities=14% Similarity=0.061 Sum_probs=176.1
Q ss_pred hHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCC------CceeEecCChHHHHHHHHHHc
Q 014724 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENK------WGVNVQPLSGSPANFEVYTAI 188 (419)
Q Consensus 115 ~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~------~~v~V~~~sGt~A~~~~~~al 188 (419)
+..+.+++.+.+ +.+..+ |.......++|+.+++++++++|++.+. .+..+++++||+||+.++.++
T Consensus 87 ~~~~~~~~~~~~-n~~~~~------~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~ 159 (486)
T 1js3_A 87 PAMLADMLCGAI-GCIGFS------WAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAA 159 (486)
T ss_dssp HHHHHHHHHHHH-CCCCSS------GGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-CcCccc------cccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHH
Confidence 455667776665 333222 2223446789999999999999998520 012367778899999888776
Q ss_pred cCC---------CC--------E--EEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhh
Q 014724 189 LKP---------HD--------R--IMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL 249 (419)
Q Consensus 189 l~p---------GD--------~--Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~ 249 (419)
.++ || + |+++++.|.++. +.+...|+. ++.++++ +++.+|+++|++.+++
T Consensus 160 ~~~~~~~~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~--------~~~~~~G~~--v~~v~~d-~~~~~d~~~L~~~i~~ 228 (486)
T 1js3_A 160 RTKVVRRLQAASPGLTQGAVLEKLVAYASDQAHSSVE--------RAGLIGGVK--LKAIPSD-GKFAMRASALQEALER 228 (486)
T ss_dssp HHHHHHHHHHHSTTCCHHHHHHHEEEEEETTCCHHHH--------HHHHHHTCE--EEEECCC-TTSCCCHHHHHHHHHH
T ss_pred HHHHhhhhhccCccchhcccCCCEEEEECCCCcHHHH--------HHHHhCCCc--eEEeecC-CCCCCCHHHHHHHHHH
Confidence 421 43 3 777887775542 233455664 4444455 4789999999999975
Q ss_pred cC-----CeEEEEcCCCCC--CcCChHHHHHHHHHhCCEEEEeccccccccccCCcCC---CCCCCcEEEeCCCCcCCCC
Q 014724 250 FR-----PKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD---PFKYCDVVTTTTHKSLRGP 319 (419)
Q Consensus 250 ~~-----pklIi~~~s~~p--~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~---~~~~~Div~~S~hK~l~Gp 319 (419)
.. |.+|+++.++|+ ...|+++|+++|++||+++++|+||..+......+.. .++++|++++++||++.+|
T Consensus 229 ~~~~g~~p~~vv~~~~~n~tG~~~~l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~~p 308 (486)
T 1js3_A 229 DKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVN 308 (486)
T ss_dssp HHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSCC
T ss_pred HHhCCCCceEEEEeCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcCCC
Confidence 32 247777766654 5689999999999999999999998665432211111 1236899999999998766
Q ss_pred -CeeEEEEeCCCcchhhH-HHHhhh---cccC--------------CCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHH
Q 014724 320 -RGGMIFFKKDPVLGVEL-ESAINN---AVFP--------------GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVV 380 (419)
Q Consensus 320 -rgG~i~~~~~~~~~~~l-~~~i~~---~~~~--------------~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~ 380 (419)
++|+++++++ ++ .+.+.. +... .++.+.... ..++..++..+..++++++.++..
T Consensus 309 ~~~G~l~~~~~-----~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~-~~~~~~al~~~g~~g~~~~~~~~~ 382 (486)
T 1js3_A 309 FDCSAMWVKRR-----TDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFR-SLKMWFVFRMYGVKGLQAYIRKHV 382 (486)
T ss_dssp SSCEEEEESCH-----HHHHGGGC------------CCSCCCGGGSSSCSCCCCT-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cceEEEEEeCH-----HHHHHHhcCCchhhCCCcccccCCCCccccCCCCCCchh-HHHHHHHHHHHhHHHHHHHHHHHH
Confidence 5599998774 32 232211 0000 011111111 223344555444456788899999
Q ss_pred HHHHHHHHHHHhC-CcEEecCCCcceeEEEEeC
Q 014724 381 SNCRALASRLVEL-GYKLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 381 ~n~~~l~~~L~~~-G~~v~~~~t~~hlv~vd~~ 412 (419)
++++++.+.|++. |++++.. .+.+++.+.+.
T Consensus 383 ~~a~~l~~~L~~~~~~~~~~~-~~~~~v~f~~~ 414 (486)
T 1js3_A 383 QLSHEFEAFVLQDPRFEVCAE-VTLGLVCFRLK 414 (486)
T ss_dssp HHHHHHHHHHHHCTTEEECSC-CCSSEEEEEES
T ss_pred HHHHHHHHHHhcCCCeEEeCC-CceeEEEEEec
Confidence 9999999999986 8998753 34566666664
No 147
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.83 E-value=2.3e-19 Score=179.86 Aligned_cols=208 Identities=17% Similarity=0.121 Sum_probs=144.7
Q ss_pred HHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccC
Q 014724 153 CQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD 232 (419)
Q Consensus 153 ~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~ 232 (419)
+++++++++|.+. .+++++|++|+..++.++++|||+|+++++.|+++..... ......|. +++.++.
T Consensus 69 l~~~la~~~g~~~-----~i~~~sG~~a~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~----~~~~~~g~--~~~~v~~- 136 (398)
T 2rfv_A 69 LEKKLAVLERGEA-----GLATASGISAITTTLLTLCQQGDHIVSASAIYGCTHAFLS----HSMPKFGI--NVRFVDA- 136 (398)
T ss_dssp HHHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEEESSSCHHHHHHHH----THHHHTTC--EEEEECT-
T ss_pred HHHHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHH----HHHHHcCC--EEEEeCC-
Confidence 4478888999863 3788999999999999999999999999998876542100 00123454 4444433
Q ss_pred CCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC-CCcEEE
Q 014724 233 ESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVT 309 (419)
Q Consensus 233 ~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p--~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~-~~Div~ 309 (419)
.|++++++.+++ ++++|++++++|| ...|+++|+++|++||+++|+|++|..+... .++. ++|+++
T Consensus 137 -----~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~-----~~~~~~~di~~ 205 (398)
T 2rfv_A 137 -----AKPEEIRAAMRP-ETKVVYIETPANPTLSLVDIETVAGIAHQQGALLVVDNTFMSPYCQ-----QPLQLGADIVV 205 (398)
T ss_dssp -----TSHHHHHHHCCT-TEEEEEEESSBTTTTBCCCHHHHHHHHHHTTCEEEEECTTTCTTTC-----CGGGGTCSEEE
T ss_pred -----CCHHHHHHhcCC-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccC-----CchhhCCcEEE
Confidence 289999999875 7899999999887 4679999999999999999999998766431 2233 689999
Q ss_pred eCCCCcCCCC--C-eeEEEEeCCCcchhhHHH-HhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHH
Q 014724 310 TTTHKSLRGP--R-GGMIFFKKDPVLGVELES-AINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRA 385 (419)
Q Consensus 310 ~S~hK~l~Gp--r-gG~i~~~~~~~~~~~l~~-~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~ 385 (419)
+|+||+|.|| | +|++++++ ++.+ .+.......-.++.+....++...+++ .+..+.++..+|++.
T Consensus 206 ~s~sK~~~~~g~~~~G~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~ 274 (398)
T 2rfv_A 206 HSVTKYINGHGDVIGGIIVGKQ------EFIDQARFVGLKDITGGCMSPFNAWLTLRGVK-----TLGIRMERHCENALK 274 (398)
T ss_dssp EETTTTTTCSSCCCCEEEEECH------HHHHHHHHTHHHHTTCCCCCHHHHHHHHHHHT-----THHHHHHHHHHHHHH
T ss_pred EeCcccccCCCCceEEEEEECH------HHHHHHHHHHHHhCCCCCCCHHHHHHHHhhhh-----hHHHHHHHHHHHHHH
Confidence 9999998665 4 49999887 4443 444322211012233322333233332 234556777888899
Q ss_pred HHHHHHhCC
Q 014724 386 LASRLVELG 394 (419)
Q Consensus 386 l~~~L~~~G 394 (419)
+.+.|++.+
T Consensus 275 l~~~l~~~~ 283 (398)
T 2rfv_A 275 IARFLEGHP 283 (398)
T ss_dssp HHHHHHTCT
T ss_pred HHHHHHcCC
Confidence 999998753
No 148
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.82 E-value=2.3e-21 Score=194.41 Aligned_cols=265 Identities=11% Similarity=0.078 Sum_probs=168.9
Q ss_pred hcccccccCCCChHHHHHHHhhhhhccCCCCCCCC---CCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEe-cCChH
Q 014724 103 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGK---RYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQ-PLSGS 178 (419)
Q Consensus 103 ~~i~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~---r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~-~~sGt 178 (419)
+...+.+++..+|+.|++++...+.+.+ +++.+ .+..+.++.+.+| .+++.+++++|++.+ ..+ ++ +.+||
T Consensus 27 ~~yl~~agpt~~p~~V~~a~~~~~~~~~--~n~~s~~~~~h~~~~~~~~~~-~ar~~la~ll~~~~~-~ev-if~t~~~T 101 (386)
T 3qm2_A 27 QVFNFSSGPAMLPAEVLKLAQQELCDWH--GLGTSVMEISHRGKEFIQVAE-EAEQDFRDLLNIPSN-YKV-LFCHGGGR 101 (386)
T ss_dssp CCEECCSSSCCCCHHHHHHHTCC-------------------------CCH-HHHHHHHHHHTCCTT-EEE-EEEESCTT
T ss_pred cCccccCCCCCCCHHHHHHHHHHHHhcc--ccCccccccCCCCHHHHHHHH-HHHHHHHHHhCCCCC-ceE-EEEcCCch
Confidence 4567889999999999999998886544 23322 1123445455555 578999999999642 112 33 35789
Q ss_pred HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCC-CCHHHHHHHhhhcCCeEEEE
Q 014724 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGL-VDYDMLEKTAILFRPKLIIA 257 (419)
Q Consensus 179 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~-iD~d~Le~~l~~~~pklIi~ 257 (419)
+++++++.+++++||+|++....+ +++.+. ......| .++.++.+. ++.+. +|++++++.+.+ ++++|.+
T Consensus 102 ~a~n~ai~~l~~~gd~v~~~~~~~---~~~~~~---~~a~~~G-~v~~v~~~~-~~~G~~~~~~~~~~~l~~-~t~lV~~ 172 (386)
T 3qm2_A 102 GQFAGVPLNLLGDKTTADYVDAGY---WAASAI---KEAKKYC-APQIIDAKI-TVDGKRAVKPMREWQLSD-NAAYLHY 172 (386)
T ss_dssp HHHHHHHHHHCTTCCEEEEEESSH---HHHHHH---HHHTTTS-EEEEEECEE-EETTEEEECCGGGCCCCT-TCSCEEE
T ss_pred HHHHHHHHhccCCCCeEEEEeCCH---HHHHHH---HHHHHhC-CeEEEecCc-ccCCCCCCchHHHhhcCC-CCcEEEE
Confidence 999999999999999988665433 333221 1122345 455555320 11343 788888777764 7898887
Q ss_pred cCCCC--CCc-CChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCCCCcEEEeCCCCcCCCCCe-eEEEEeCCCc--
Q 014724 258 GASAY--PRD-FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPV-- 331 (419)
Q Consensus 258 ~~s~~--p~~-~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~~~Div~~S~hK~l~Gprg-G~i~~~~~~~-- 331 (419)
.+..+ ++. .|+++|. +|+++++|++|..|.. +.+++..|++++|.||++ ||.| |+++.+++..
T Consensus 173 ~h~et~tG~~i~pi~~i~-----~g~~~~vDa~qs~g~~-----pidv~~~~~~~~s~hK~l-GP~G~g~l~v~~~~~~~ 241 (386)
T 3qm2_A 173 CPNETIDGIAIDETPDFG-----PEVVVTADFSSTILSA-----PLDVSRYGVIYAGAQKNI-GPAGLTLVIVREDLLGK 241 (386)
T ss_dssp CSEETTTTEECCCCCCCC-----TTCCEEEECTTTTTSS-----CCCGGGCSEEEEETTTTT-CCTTEEEEEEEGGGCSC
T ss_pred ECCcCCcCEecCchhhhc-----CCCEEEEEcccccCCC-----CCCccccCEEEEeccccc-CCCccEEEEECHHHHhh
Confidence 76555 664 7888875 8999999999987743 223334578889999999 7998 9999987521
Q ss_pred -----c-hhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcCh-HHHHHHHHHHHHHHHHHHHHHhCCc
Q 014724 332 -----L-GVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVELGY 395 (419)
Q Consensus 332 -----~-~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~-~~~~~~~~v~~n~~~l~~~L~~~G~ 395 (419)
. ..++...... ....++|+...+.++..|++.+.+. ++++..++..++++++++.|++.|+
T Consensus 242 ~~~~~p~~~~~~~~~~~---~~~~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~~~l~~~~~ 309 (386)
T 3qm2_A 242 AHESCPSILDYTVLNDN---DSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNSDF 309 (386)
T ss_dssp CCTTSCGGGCHHHHHHC----------CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTCSS
T ss_pred hcccCCcHHHHHHHhhc---CCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 0 0001111111 1123567777888999999888755 5788999999999999999999886
No 149
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.82 E-value=2e-19 Score=179.79 Aligned_cols=306 Identities=15% Similarity=0.147 Sum_probs=178.8
Q ss_pred ccccChh-HHHHHHHHHHHh-hhcccccccC--CC-----ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHH
Q 014724 83 LGEADPE-VCEIITKEKERQ-FKSLELIASE--NF-----TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLC 153 (419)
Q Consensus 83 l~~~~~~-~~~~~~~e~~r~-~~~i~L~~se--n~-----~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~ 153 (419)
+...++. ++.+.+..+... .+.|+|..+. ++ +.+.|++++...+.+....+|+. ..|. .++.+.+
T Consensus 7 ~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~---~~g~---~~lr~~i 80 (401)
T 7aat_A 7 VEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLP---IAGL---ADFTRAS 80 (401)
T ss_dssp CCCCCCCHHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCC---TTCC---HHHHHHH
T ss_pred CCCCCCChhHHHHHHHhhCCCCCceeeeeeeEECCCCCEechHHHHHHHHHhcccccccCCCC---CCCC---HHHHHHH
Confidence 4445554 455555443322 3358887665 22 23578888877654322334443 1232 3555555
Q ss_pred HHHHHHHcCCC--CCCCceeEe-cCChHHHHHHHHHHc---cCCCCEEEEeCCCCCccccCccccccccccccccccEEE
Q 014724 154 QKRALAAFNLD--ENKWGVNVQ-PLSGSPANFEVYTAI---LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESM 227 (419)
Q Consensus 154 ~~~la~~~g~~--~~~~~v~V~-~~sGt~A~~~~~~al---l~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v 227 (419)
.+++.+.+|.+ ++ + +.++ +++|++|+..++.++ ++|||+|++.+|.|.++.. .+...|.. ++
T Consensus 81 a~~~~~~~~~~~~~~-~-i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~--------~~~~~g~~--~~ 148 (401)
T 7aat_A 81 AELALGENSEAFKSG-R-YVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTP--------IFRDAGLQ--LQ 148 (401)
T ss_dssp HHHHHCTTCHHHHTT-C-EEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHH--------HHHHTTCE--EE
T ss_pred HHHhcCCCccccccC-c-eEEEecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchhHHH--------HHHHcCCe--eE
Confidence 55555444432 32 2 2112 445678999887665 4999999999998877642 23445654 44
Q ss_pred ecccC-CCCCCCCHHHHHHHhhh--cCCeEEEEcCCCCCCc-----CChHHHHHHHHHhCCEEEEeccccccccccCCc-
Q 014724 228 PYRLD-ESTGLVDYDMLEKTAIL--FRPKLIIAGASAYPRD-----FDYPRMRQIADAVGALLMMDMAHISGLVAASVV- 298 (419)
Q Consensus 228 ~~~~~-~~~~~iD~d~Le~~l~~--~~pklIi~~~s~~p~~-----~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~- 298 (419)
.++++ ++++.+|++.+++.+++ .++++|++++++||+- .++++|+++|++||+++++|++| .++...+..
T Consensus 149 ~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay-~~~~~~~~~~ 227 (401)
T 7aat_A 149 AYRYYDPKTCSLDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAY-QGFASGDINR 227 (401)
T ss_dssp EEECEETTTTEECHHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESC-TTTTTSCHHH
T ss_pred eeeeeccccCccCHHHHHHHHHhCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEcccc-ccccCCCccc
Confidence 44442 24678999988888764 3568899999999862 35788999999999999999996 344432210
Q ss_pred -CCCC----C--CCcEEEeCCCCcC--CCCCeeEEEEeCCCcchhh----HHHHhhhcccCCCCCCChHHHHHHHHHHHH
Q 014724 299 -ADPF----K--YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVE----LESAINNAVFPGLQGGPHNHTIGGLAVCLK 365 (419)
Q Consensus 299 -~~~~----~--~~Div~~S~hK~l--~GprgG~i~~~~~~~~~~~----l~~~i~~~~~~~~~g~p~~~~iaala~al~ 365 (419)
..++ + ...++++|+||+| +|+|.|+++...... + +.+.+......+..+.+ ....++.+.++.
T Consensus 228 ~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~RiG~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~ 303 (401)
T 7aat_A 228 DAWALRHFIEQGIDVVLSQSYAKNMGLYGERAGAFTVICRDA---EEAKRVESQLKILIRPMYSNPP-MNGARIASLILN 303 (401)
T ss_dssp HTHHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSSH---HHHHHHHHHHHHHHHHHHSSCC-HHHHHHHHHHHH
T ss_pred cHHHHHHHHhcCCcEEEEecCCcccccccCceEEEEEEeCCH---HHHHHHHHHHHHHHHhccCCCC-hHHHHHHHHHhC
Confidence 0001 1 3458899999997 688899988732110 2 33333322222222222 222222222221
Q ss_pred Hh-----cChHHHHHHHHHHHHHHHHHHHHHhCC----cEEecCCCcceeEEEEeC
Q 014724 366 HA-----QSPEFKVYQNKVVSNCRALASRLVELG----YKLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 366 ~~-----~~~~~~~~~~~v~~n~~~l~~~L~~~G----~~v~~~~t~~hlv~vd~~ 412 (419)
.. ...+.++..+++.+++++|.+.|++.| +++... ..+.++|+++.
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~-~~~~~~~~~~~ 358 (401)
T 7aat_A 304 TPELRKEWLVEVKGMADRIISMRTQLVSNLKKEGSSHNWQHITD-QIGMFCFTGLK 358 (401)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHH-CCSSEEECCCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCceecC-CcceEEecCCC
Confidence 10 012346677888899999999999876 544432 23455676653
No 150
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.82 E-value=1.6e-20 Score=187.52 Aligned_cols=261 Identities=11% Similarity=0.055 Sum_probs=177.2
Q ss_pred cCCCChHHHHHHHhhhhhccCCCCCC-CCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEec--CChHHHHHHHHH
Q 014724 110 SENFTSRAVMEAVGSCLTNKYSEGLP-GKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQP--LSGSPANFEVYT 186 (419)
Q Consensus 110 sen~~~~~V~eal~~~l~~~y~~g~p-~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~--~sGt~A~~~~~~ 186 (419)
+..++|+.|++++...+.+.+..+.. ...+..+.++.+.++ .+++.+++++|++.+ . +|++ .+||+++++++.
T Consensus 20 t~~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~-~ar~~la~ll~~~~~-~--evif~t~~~T~a~n~a~~ 95 (377)
T 3e77_A 20 FQSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIIN-NTENLVRELLAVPDN-Y--KVIFLQGGGCGQFSAVPL 95 (377)
T ss_dssp CSCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHH-HHHHHHHHHHTCCTT-E--EEEEESSHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHH-HHHHHHHHHhCCCCC-C--eEEEEcCchHHHHHHHHH
Confidence 34568999999999998765532211 111234556666666 688999999999752 1 3444 457899999999
Q ss_pred HccCC--CCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCC--
Q 014724 187 AILKP--HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY-- 262 (419)
Q Consensus 187 all~p--GD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~-- 262 (419)
+++++ ||+|++....+ +++.+. +.++..|. +...++++ +++.+|++.++..+. .++++|.+.+..+
T Consensus 96 ~l~~~~~Gd~v~~~~~g~---~~~~~~---~~a~~~G~--~~~~~~~~-~~~~~~~~~~~~~i~-~~t~lV~~~h~et~t 165 (377)
T 3e77_A 96 NLIGLKAGRCADYVVTGA---WSAKAA---EEAKKFGT--INIVHPKL-GSYTKIPDPSTWNLN-PDASYVYYCANETVH 165 (377)
T ss_dssp HHGGGSTTCEEEECCCSH---HHHHHH---HHHTTTSE--EEECSCCC-SSSCSCCCGGGCCCC-TTCSCEEEESEETTT
T ss_pred hccCCCCCCeEEEEECCH---HHHHHH---HHHHHhCC--ceEEeccC-CCcCCCCChHHhccC-CCccEEEEeCccCch
Confidence 99875 99998775433 333221 11223343 44444443 244567777766655 3788887765444
Q ss_pred CCcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCCCCcEEEeCCCCcCCCCCe-eEEEEeCCCc-------c-h
Q 014724 263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPV-------L-G 333 (419)
Q Consensus 263 p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~~~Div~~S~hK~l~Gprg-G~i~~~~~~~-------~-~ 333 (419)
++..|+ ||+++|+++++|++|..|.. +.+++..|++++|.||++ ||.| |+++.+++.. . .
T Consensus 166 G~~~pi-----i~~~~~~~~~vD~~q~~g~~-----~id~~~~~~~~~s~~K~~-gp~G~g~l~~~~~~l~~~~~~~p~~ 234 (377)
T 3e77_A 166 GVEFDF-----IPDVKGAVLVCDMSSNFLSK-----PVDVSKFGVIFAGAQKNV-GSAGVTVVIVRDDLLGFALRECPSV 234 (377)
T ss_dssp TEECSS-----CCCCTTCCEEEECTTTTTSS-----CCCGGGCSEEEEEGGGTT-SCTTCEEEEEETTSCSCCCTTSCGG
T ss_pred heEchh-----hhccCCCEEEEEcccccCCC-----CCchhhcCEEEEeccccc-CCCccEEEEEcHHHHhhccCCCCch
Confidence 667787 57889999999999987743 222334568999999999 8988 9998888531 0 0
Q ss_pred hhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcCh-HHHHHHHHHHHHHHHHHHHHHhC-CcEEe
Q 014724 334 VELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVEL-GYKLV 398 (419)
Q Consensus 334 ~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~-~~~~~~~~v~~n~~~l~~~L~~~-G~~v~ 398 (419)
.++..... .....++|+...+.++..|++.+.+. +++++.++..+++++++++|++. |+.+.
T Consensus 235 ~~~~~~~~---~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~~~ 298 (377)
T 3e77_A 235 LEYKVQAG---NSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVC 298 (377)
T ss_dssp GCHHHHHT---TTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSEEC
T ss_pred hhHHHHhh---cCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhcCCceec
Confidence 01111111 12234688888999999999988766 67999999999999999999997 88754
No 151
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.82 E-value=2.3e-19 Score=182.01 Aligned_cols=253 Identities=9% Similarity=-0.041 Sum_probs=150.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCC--------------EEEEe-CCCCCccccCccc
Q 014724 147 DELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHD--------------RIMGL-DLPHGGHLSHGFM 211 (419)
Q Consensus 147 ~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD--------------~Vl~~-~~~~~g~~s~~~~ 211 (419)
.++++.+.+++.+.+|+..+ ....+++++|++|+++++.+++++|| +|+++ +|+|.++......
T Consensus 86 ~~lr~~ia~~l~~~~g~~~~-~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~~~ 164 (444)
T 3if2_A 86 SAFIDALVGFFNRHYDWNLT-SENIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHVE 164 (444)
T ss_dssp HHHHHHHHHHHHHHHCCCCC-GGGEEEESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSSCCGGGTTCCSS
T ss_pred HHHHHHHHHHHHhhcCCCCC-HHHEEEecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCCCCccchhhcccc
Confidence 46776677777776665431 11124445557899999999999998 78876 7877766421100
Q ss_pred cccccccccccccEEEecccCCCC----CCCCHHHHHHHhh--hcCCeEEEEcCCCCCC--cCC---hHHHHHHHHHhCC
Q 014724 212 TPKRRVSGTSIYFESMPYRLDEST----GLVDYDMLEKTAI--LFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGA 280 (419)
Q Consensus 212 ~~~~~i~~~g~~~~~v~~~~~~~~----~~iD~d~Le~~l~--~~~pklIi~~~s~~p~--~~d---l~~I~~ia~~~ga 280 (419)
.. ...+.+..++++++++++ +.+|+++|++.++ ..++++|++++|+||+ ..+ +++|+++|++||+
T Consensus 165 --~~--~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~ 240 (444)
T 3if2_A 165 --GQ--HFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEGRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDI 240 (444)
T ss_dssp --SC--CEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHHTTCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTC
T ss_pred --cc--hhhccCceEEecccccccCccccCCCHHHHHHHHHhcCCCceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCC
Confidence 00 122233455555555322 3799999998842 2478999998888884 455 7889999999999
Q ss_pred EEEEecccccccc---ccCCcCCCCCCCcEEEeCCCCcC-CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHH
Q 014724 281 LLMMDMAHISGLV---AASVVADPFKYCDVVTTTTHKSL-RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHT 356 (419)
Q Consensus 281 ~livD~ah~~Gl~---~~g~~~~~~~~~Div~~S~hK~l-~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~ 356 (419)
+||+|++|..... +.+..+ ...+.+++++|+||++ +|.|.|+++.++ ++.+.+.........+.+...
T Consensus 241 ~li~De~~~~~~~~~~~~~~~~-~~~~~~i~~~S~sK~~~~G~r~G~~~~~~------~l~~~~~~~~~~~~~~~~~~~- 312 (444)
T 3if2_A 241 PLIIDNAYGMPFPNIIYSDAHL-NWDNNTILCFSLSKIGLPGMRTGIIVADA------KVIEAVSAMNAVVNLAPTRFG- 312 (444)
T ss_dssp CEEEECTTCTTTTCCBCSCCCC-CCCTTEEEEEESTTTTCGGGCCEEEECCH------HHHHHHHHHHHHHHSSCCCHH-
T ss_pred EEEEECCCCCcccccccccccc-cCCCCEEEEechhhccCCCCceEEEEECH------HHHHHHHHHHHhccCCCChHH-
Confidence 9999999853211 111100 1125679999999974 677889998876 566665443221111122222
Q ss_pred HHHHHHHHHHhcC-hHHHH-HHHHHHHHHHHHHHHHHh----CCcEEecCCCcceeEEEEeCC
Q 014724 357 IGGLAVCLKHAQS-PEFKV-YQNKVVSNCRALASRLVE----LGYKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 357 iaala~al~~~~~-~~~~~-~~~~v~~n~~~l~~~L~~----~G~~v~~~~t~~hlv~vd~~~ 413 (419)
.+++...+..... ....+ ..+++.++++.+.+.|.+ .|+.+... ....++|+++..
T Consensus 313 ~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~g~~~~~~~~~ 374 (444)
T 3if2_A 313 AAIATPLVANDRIKQLSDNEIKPFYQKQATLAVKLLKQALGDYPLMIHKP-EGAIFLWLWFKD 374 (444)
T ss_dssp HHHHHHHHHTSHHHHHHHHTHHHHHHHHHHHHHHHHHHHSSSSSEEEECC-CBSSEEEEEETT
T ss_pred HHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEecC-CccEEEEEEcCC
Confidence 2222222322110 01112 344455666666666655 36666542 345678888864
No 152
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.82 E-value=3.3e-19 Score=180.51 Aligned_cols=212 Identities=14% Similarity=0.063 Sum_probs=147.1
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccc
Q 014724 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (419)
Q Consensus 142 g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g 221 (419)
+++..+++| +++++++|.+. .++++||++|+++++.++++|||+|++.++.|++.+.... ..+...|
T Consensus 80 ~~p~~~~le----~~lA~l~g~~~-----~i~~ssGt~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~----~~l~~~G 146 (415)
T 2fq6_A 80 GTLTHFSLQ----QAMCELEGGAG-----CVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCS----KILSKLG 146 (415)
T ss_dssp CCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHHH----HTGGGGT
T ss_pred CCchHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHH----HHHHHcC
Confidence 445556666 67888899764 3777999999999999999999999999998877542110 0112234
Q ss_pred cccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CcCChHHHHHHHHH--hCCEEEEeccccccccccCC
Q 014724 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADA--VGALLMMDMAHISGLVAASV 297 (419)
Q Consensus 222 ~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p--~~~dl~~I~~ia~~--~ga~livD~ah~~Gl~~~g~ 297 (419)
. ++..++. .|+++|++++++ ++|+|++++++|| ...|+++|+++|++ +|+++++|++|..+..
T Consensus 147 ~--~v~~v~~------~d~~~le~ai~~-~tklV~~e~~~NptG~v~dl~~I~~la~~~~~g~~livD~a~a~~~~---- 213 (415)
T 2fq6_A 147 V--TTSWFDP------LIGADIVKHLQP-NTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVL---- 213 (415)
T ss_dssp C--EEEEECT------TCGGGGGGGCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECTTTTTTS----
T ss_pred c--EEEEECC------CCHHHHHHhhcc-CCcEEEEECCCCCCCEeecHHHHHHHHHhhcCCCEEEEECCCccccc----
Confidence 4 4444432 288999998875 7899999999987 46799999999999 9999999999876532
Q ss_pred cCCCCC-CCcEEEeCCCCcCCCCC---eeEEEEeCCCcchhhHHHHhhhccc-CCCCCCChHHHHHHHHHHHHHhcChHH
Q 014724 298 VADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVF-PGLQGGPHNHTIGGLAVCLKHAQSPEF 372 (419)
Q Consensus 298 ~~~~~~-~~Div~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~-~~~~g~p~~~~iaala~al~~~~~~~~ 372 (419)
..|++ ++|++++|+||++.|+. +|+++.+++ +.+.+..... .+...+| ...+.+..+++ .+
T Consensus 214 -~~p~~~g~Div~~S~sK~lg~~g~~~~G~l~~~~~------~~~~l~~~~~~~G~~~~~--~~a~~~~~~l~-----~l 279 (415)
T 2fq6_A 214 -FKALDFGIDVSIQAATKYLVGHSDAMIGTAVCNAR------CWEQLRENAYLMGQMVDA--DTAYITSRGLR-----TL 279 (415)
T ss_dssp -SCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECTT------THHHHHHHHHHTTCCCCH--HHHHHHHHHHH-----HH
T ss_pred -CCccccCCeEEEEeCccccCCCCCceEEEEEeCHH------HHHHHHHHHHhcCCCCCH--HHHHHHHhhhh-----HH
Confidence 12344 79999999999997653 799998873 3344432211 1211111 11111111222 34
Q ss_pred HHHHHHHHHHHHHHHHHHHhC
Q 014724 373 KVYQNKVVSNCRALASRLVEL 393 (419)
Q Consensus 373 ~~~~~~v~~n~~~l~~~L~~~ 393 (419)
..+.++..+|++.+++.|++.
T Consensus 280 ~~r~~~~~~n~~~l~~~L~~~ 300 (415)
T 2fq6_A 280 GVRLRQHHESSLKVAEWLAEH 300 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHcC
Confidence 556777888999999999886
No 153
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.82 E-value=9.5e-20 Score=183.01 Aligned_cols=303 Identities=15% Similarity=0.173 Sum_probs=178.4
Q ss_pred ccccccChhHHHHHHHHHHH-h-hhcccccccC----C---CChHHHHHHHhh-hhhccCCCCCCCCCCCCchhHHHHHH
Q 014724 81 YSLGEADPEVCEIITKEKER-Q-FKSLELIASE----N---FTSRAVMEAVGS-CLTNKYSEGLPGKRYYGGNEYIDELE 150 (419)
Q Consensus 81 ~~l~~~~~~~~~~~~~e~~r-~-~~~i~L~~se----n---~~~~~V~eal~~-~l~~~y~~g~p~~r~~~g~~~~~~lE 150 (419)
+++...+++.+..+..+... + .+.|+|..+. + ++++.|++++.+ .+......+|.. ..| ..+++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~---~~g---~~~lr 79 (412)
T 1yaa_A 6 NNIELLPPDALFGIKQRYGQDQRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLG---ITG---LPSLT 79 (412)
T ss_dssp TTCCCCCCCTTHHHHHHHHTCCCSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCC---TTC---CHHHH
T ss_pred ccCcccCCCcHHHHHHHHhcCCCCCeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCcccccCCCC---CCC---cHHHH
Confidence 33455555533323322221 1 3457777654 2 467999999988 764322223422 112 23565
Q ss_pred HHHHHHHHHHcCC--CCCCCceeEe--cCChHHHHHHH--HHHccCCCCEEEEeCCCCCccccCcccccccccccccccc
Q 014724 151 TLCQKRALAAFNL--DENKWGVNVQ--PLSGSPANFEV--YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYF 224 (419)
Q Consensus 151 ~~~~~~la~~~g~--~~~~~~v~V~--~~sGt~A~~~~--~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~ 224 (419)
+.+.+++...+|. +++ . + ++ +.+|++|+.++ +..+++|||+|++++|.|.++.. .+...|..
T Consensus 80 ~~ia~~~~~~~~~~~~~~-~-i-~~~~t~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~~--------~~~~~g~~- 147 (412)
T 1yaa_A 80 SNAAKIIFGTQSDALQED-R-V-ISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMA--------IFENQGLK- 147 (412)
T ss_dssp HHHHHHHHCTTCHHHHTT-C-E-EEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHH--------HHHTTTCC-
T ss_pred HHHHHHHhcCCCCCCCcc-e-E-EEEeccchHhHHHHHHHHHHHhCCCCEEEEeCCCCccHHH--------HHHHcCce-
Confidence 5555555443342 332 1 2 33 45567898887 45556899999999998877542 22344554
Q ss_pred EEEeccc-CCCCCCCCHHHHHHHhhhcC--CeEEEEcCCCCCC--cC---ChHHHHHHHHHhCCEEEEeccccccccccC
Q 014724 225 ESMPYRL-DESTGLVDYDMLEKTAILFR--PKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAAS 296 (419)
Q Consensus 225 ~~v~~~~-~~~~~~iD~d~Le~~l~~~~--pklIi~~~s~~p~--~~---dl~~I~~ia~~~ga~livD~ah~~Gl~~~g 296 (419)
++.++. +++++.+|+++|++.+++.+ .+++++++++||+ .. ++++|.++|++||++||+|++|. ++.+.+
T Consensus 148 -~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~-~~~~~~ 225 (412)
T 1yaa_A 148 -TATYPYWANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQ-GFATGD 225 (412)
T ss_dssp -EEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCT-TTSSSC
T ss_pred -EEEEeeecCCCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccc-cccCCc
Confidence 444444 33467899999999987642 3455558899985 33 46789999999999999999963 443322
Q ss_pred ---Cc-CC-CCC--C----CcEEEeCCCCcCC--CCCeeEEE--E-----eCCCcchhh----HHHHhhhcccCCCCCCC
Q 014724 297 ---VV-AD-PFK--Y----CDVVTTTTHKSLR--GPRGGMIF--F-----KKDPVLGVE----LESAINNAVFPGLQGGP 352 (419)
Q Consensus 297 ---~~-~~-~~~--~----~Div~~S~hK~l~--GprgG~i~--~-----~~~~~~~~~----l~~~i~~~~~~~~~g~p 352 (419)
.. +. .+. + .+++++|+||+|+ |.|.|+++ . ++ + +.+.+......... ++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~GlriG~~~~~~~~~~~~~------~~~~~l~~~l~~~~~~~~~-~~ 298 (412)
T 1yaa_A 226 LDKDAYAVRLGVEKLSTVSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQNK------TIKPAVTSQLAKIIRSEVS-NP 298 (412)
T ss_dssp HHHHTHHHHHHHHHTTTTCCEEEEEECTTTSCCGGGCEEEEEEECCSCTTHH------HHHHHHHHHHHHHHHTTTS-SC
T ss_pred ccchhHHHHHHHhcCCCCcceEEEeccCCCCCCcCCcceEEEEEecCCCCCH------HHHHHHHHHHHHHHhhccC-CC
Confidence 10 00 111 2 3578999999983 67789998 6 33 4 55555542222222 32
Q ss_pred hHHHHHHHHHHHHHhc-----ChHHHHHHHHHHHHHHHHHHHHHhCC----cEEecCCCcceeEEEEe
Q 014724 353 HNHTIGGLAVCLKHAQ-----SPEFKVYQNKVVSNCRALASRLVELG----YKLVSGGSDNHLVLVDL 411 (419)
Q Consensus 353 ~~~~iaala~al~~~~-----~~~~~~~~~~v~~n~~~l~~~L~~~G----~~v~~~~t~~hlv~vd~ 411 (419)
+....+++..++.... ..+.++..+++.++++++.+.|++.| +++..+. .+.++|+++
T Consensus 299 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-~~~~~~~~~ 365 (412)
T 1yaa_A 299 PAYGAKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLGTPGNWDHIVNQ-CGMFSFTGL 365 (412)
T ss_dssp CHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCTHHHHC-CSSEEECCC
T ss_pred ChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeeeccC-ceEEEeeCC
Confidence 3333333344454321 12456778888899999999998876 7665422 234456554
No 154
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.82 E-value=2e-20 Score=183.95 Aligned_cols=273 Identities=12% Similarity=0.075 Sum_probs=172.4
Q ss_pred cccccccCCCChHHHHHHHhhhhhccCCCCCCCCCCCC----chhHHHHHHHHHHHHHHHHcCCCCCCCceeEecC-Ch-
Q 014724 104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYG----GNEYIDELETLCQKRALAAFNLDENKWGVNVQPL-SG- 177 (419)
Q Consensus 104 ~i~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~----g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~-sG- 177 (419)
.+.+.+++..+|+.|++++.+.+.+ +. .++...|. +.. ..++.+.+++++++++|++..+ +|+++ ++
T Consensus 4 ~~~~~~g~~~~p~~v~~a~~~~~~~-~~--~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~g~~~~~---~v~~~~g~g 76 (360)
T 1w23_A 4 VFNFNAGPSALPKPALERAQKELLN-FN--DTQMSVMELSHRSQS-YEEVHEQAQNLLRELLQIPNDY---QILFLQGGA 76 (360)
T ss_dssp CEECCSSSCCCCHHHHHHHHHTSSS-ST--TSSSCGGGSCTTSHH-HHHHHHHHHHHHHHHHTCCTTE---EEEEESSHH
T ss_pred eEeecCCCcCCCHHHHHHHHHHhhh-hc--cccccccccCCCCHH-HHHHHHHHHHHHHHHhCCCCCc---eEEEECCcc
Confidence 4677888888999999999988753 21 11111110 122 2233345678999999996321 34444 44
Q ss_pred HHHHHHHHHHccCC---CCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHH-HhhhcCCe
Q 014724 178 SPANFEVYTAILKP---HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEK-TAILFRPK 253 (419)
Q Consensus 178 t~A~~~~~~all~p---GD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~-~l~~~~pk 253 (419)
++|+.+++.+++.+ ||.|+++.++|... ..+...| .+. .++++++++.+|++++++ .+. .++|
T Consensus 77 t~al~~~~~~l~~~~~~g~~vi~~~~~~~~~---------~~~~~~g-~~~--~v~~~~~~~~~d~~~l~~~~i~-~~~k 143 (360)
T 1w23_A 77 SLQFTMLPMNLLTKGTIGNYVLTGSWSEKAL---------KEAKLLG-ETH--IAASTKANSYQSIPDFSEFQLN-ENDA 143 (360)
T ss_dssp HHHHHHHHHHHCCTTCEEEEEECSHHHHHHH---------HHHHTTS-EEE--EEEECGGGTSCSCCCGGGCCCC-TTEE
T ss_pred hHHHHHHHHHhcCCCCcccEEEecchhHHHH---------HHHHHhC-CeE--EeecccccCcCCccchHhhccC-CCCC
Confidence 67999999999876 55566544332210 0123345 444 444543355689999988 775 4789
Q ss_pred EEEEcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCCCCcEEEeCCCCcCCCCCe-eEEEEeCCC
Q 014724 254 LIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDP 330 (419)
Q Consensus 254 lIi~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~~~Div~~S~hK~l~Gprg-G~i~~~~~~ 330 (419)
+|++++++||+ ..+ +|+++||++|++|++|..|.. +.++...|++++|+||+|+ |.| |++++++
T Consensus 144 ~v~~~~~~nptG~~~~-----~i~~~~~~~li~D~a~~~~~~-----~~~~~~~di~~~s~sK~~~-~~G~G~~~~~~-- 210 (360)
T 1w23_A 144 YLHITSNNTIYGTQYQ-----NFPEINHAPLIADMSSDILSR-----PLKVNQFGMIYAGAQKNLG-PSGVTVVIVKK-- 210 (360)
T ss_dssp EEEEESEETTTTEECS-----SCCCCCSSCEEEECTTTTTSS-----CCCGGGCSEEEEETTTTTS-CTTCEEEEEEH--
T ss_pred EEEEeCCCCCcceecc-----cccccCCceEEEechhhcCCC-----CcCcccCCEEEEEcccccC-CCCcEEEEEcH--
Confidence 99998888875 334 333489999999999876532 1122233899999999884 655 9999987
Q ss_pred cchhhHHHHhhhcc-----------cCCCCCCChHHHHHHHHHHHHHhcCh-HHHHHHHHHHHHHHHHHHHHHhCC-c-E
Q 014724 331 VLGVELESAINNAV-----------FPGLQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKVVSNCRALASRLVELG-Y-K 396 (419)
Q Consensus 331 ~~~~~l~~~i~~~~-----------~~~~~g~p~~~~iaala~al~~~~~~-~~~~~~~~v~~n~~~l~~~L~~~G-~-~ 396 (419)
++.+++.... .....++++...++++..+++.+... ++++..+++.++++++.+.|++.+ + .
T Consensus 211 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 286 (360)
T 1w23_A 211 ----DLLNTKVEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYV 286 (360)
T ss_dssp ----HHHCSCCTTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTTTSSE
T ss_pred ----HHHhhcccCCcchhhhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHccCccc
Confidence 4444443211 01122455555666666677665433 467888999999999999999876 5 5
Q ss_pred Ee--cCCCcceeEEEEeCC
Q 014724 397 LV--SGGSDNHLVLVDLRP 413 (419)
Q Consensus 397 v~--~~~t~~hlv~vd~~~ 413 (419)
+. ++...++++|+++..
T Consensus 287 ~~~~~~~~~~~~~~~~~~~ 305 (360)
T 1w23_A 287 GHAEKGSRSLMNVTFNLRN 305 (360)
T ss_dssp ESSCGGGBCSSEEEEECSS
T ss_pred ccCCchhccCcEEEEEcCC
Confidence 53 211124488888753
No 155
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.82 E-value=1.5e-18 Score=175.64 Aligned_cols=216 Identities=18% Similarity=0.222 Sum_probs=150.0
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccc
Q 014724 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (419)
Q Consensus 142 g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g 221 (419)
+++...++| +++++++|.+. .++++||++|+..++.++++|||+|++.++.|++...... ......|
T Consensus 79 ~~p~~~~l~----~~la~~~g~~~-----~~~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~----~~~~~~g 145 (414)
T 3ndn_A 79 GNPTVSVFE----ERLRLIEGAPA-----AFATASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCS----EILPRWG 145 (414)
T ss_dssp CCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHH----THHHHTT
T ss_pred CChHHHHHH----HHHHHHHCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHH----HHHHHcC
Confidence 445555555 67888888754 3788899999999999999999999999998877542110 0011245
Q ss_pred cccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcC
Q 014724 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (419)
Q Consensus 222 ~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~ 299 (419)
. +++.++.+ |+++|++.+++ ++|+|++++++||+ ..|+++|+++|+++|++||+|++|..|.. .
T Consensus 146 ~--~~~~v~~~------d~~~l~~ai~~-~t~~v~le~p~NptG~~~~l~~i~~la~~~g~~livDe~~~~~~~-----~ 211 (414)
T 3ndn_A 146 V--QTVFVDGD------DLSQWERALSV-PTQAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVLDNVFATPLL-----Q 211 (414)
T ss_dssp C--EEEEECTT------CHHHHHHHTSS-CCSEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHH-----C
T ss_pred c--EEEEeCCC------CHHHHHHhcCC-CCeEEEEECCCCCCCccccHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence 4 44554432 89999999875 79999999999884 67999999999999999999999876643 2
Q ss_pred CCCC-CCcEEEeCCCCcCCC---CCeeEEEEeCCCcchhhHHHHhhhcc-cCCCCCCChHHHHHHHHHHHHHhcChHHHH
Q 014724 300 DPFK-YCDVVTTTTHKSLRG---PRGGMIFFKKDPVLGVELESAINNAV-FPGLQGGPHNHTIGGLAVCLKHAQSPEFKV 374 (419)
Q Consensus 300 ~~~~-~~Div~~S~hK~l~G---prgG~i~~~~~~~~~~~l~~~i~~~~-~~~~~g~p~~~~iaala~al~~~~~~~~~~ 374 (419)
.++. ++|+++.|+||+|.| +++|+++++++ .+.+.+.... ..+. .... ..+ +.++..+ +.+..
T Consensus 212 ~~~~~g~div~~S~sK~l~~~G~~~~G~vv~~~~-----~~~~~l~~~~~~~g~--~~~~--~~a-~~~~~~l--~~l~~ 279 (414)
T 3ndn_A 212 QGFPLGVDVVVYSGTKHIDGQGRVLGGAILGDRE-----YIDGPVQKLMRHTGP--AMSA--FNA-WVLLKGL--ETLAI 279 (414)
T ss_dssp CCGGGTCSEEEEETTTTTTCSSCCCCEEEEECHH-----HHTTHHHHHHHHHCC--CCCH--HHH-HHHHHHG--GGHHH
T ss_pred CchhcCCCeEeccCCccccCCCCceEEEEEECHH-----HHHHHHHHHHHHcCC--CCCH--HHH-HHHHHHH--HHHHH
Confidence 3444 789999999999955 56899999873 2222333211 0111 1111 212 2233333 34566
Q ss_pred HHHHHHHHHHHHHHHHHhC-CcE
Q 014724 375 YQNKVVSNCRALASRLVEL-GYK 396 (419)
Q Consensus 375 ~~~~v~~n~~~l~~~L~~~-G~~ 396 (419)
..+++.+|++++.+.|++. ++.
T Consensus 280 r~~~~~~~a~~l~~~L~~~p~v~ 302 (414)
T 3ndn_A 280 RVQHSNASAQRIAEFLNGHPSVR 302 (414)
T ss_dssp HHHHHHHHHHHHHHHHHTCTTEE
T ss_pred HHHHHHHHHHHHHHHHhcCCCEe
Confidence 7788899999999999886 443
No 156
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.82 E-value=7.2e-19 Score=179.07 Aligned_cols=267 Identities=19% Similarity=0.208 Sum_probs=168.7
Q ss_pred ccccccCC--CChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHH
Q 014724 105 LELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF 182 (419)
Q Consensus 105 i~L~~sen--~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~ 182 (419)
+++.++.+ .+++++++++... .+. |.......+++ +.+++++|.+. .+++++|++|+.
T Consensus 45 lD~~~~~~~~~~~~~~~~a~~~~-~~~----------y~~~~~~~~l~----~~la~~~~~~~-----~~~~~~gt~a~~ 104 (456)
T 2ez2_A 45 IDLLTDSGTNAMSDKQWAGMMMG-DEA----------YAGSENFYHLE----RTVQELFGFKH-----IVPTHQGRGAEN 104 (456)
T ss_dssp EECSCSSSCCCCCHHHHHHHTTC-CCC----------SSSCHHHHHHH----HHHHHHHCCSE-----EEEESSHHHHHH
T ss_pred eeeccccCCccCCHHHHHHhhcc-hhh----------cccChhHHHHH----HHHHHHhCCCc-----EEEeCCcHHHHH
Confidence 44544443 3578888887521 111 22223344554 56788888753 377788999999
Q ss_pred HHHHHccCCCCEEEEeCCCC-CccccCccccccccccccccccEEEecccCC----C-----CCCCCHHHHHHHhhhcC-
Q 014724 183 EVYTAILKPHDRIMGLDLPH-GGHLSHGFMTPKRRVSGTSIYFESMPYRLDE----S-----TGLVDYDMLEKTAILFR- 251 (419)
Q Consensus 183 ~~~~all~pGD~Vl~~~~~~-~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~----~-----~~~iD~d~Le~~l~~~~- 251 (419)
.++.++++||| +++++.| +.+. ..+...|. +++.+++++ + ++.+|+++|++.+++..
T Consensus 105 ~al~~l~~~gd--i~~~~~~~~~~~--------~~~~~~G~--~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~ 172 (456)
T 2ez2_A 105 LLSQLAIKPGQ--YVAGNMYFTTTR--------YHQEKNGA--VFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGA 172 (456)
T ss_dssp HHHHHHCCTTC--EEEESSCCHHHH--------HHHHHTTC--EEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCG
T ss_pred HHHHHhCCCCC--EeccccccchhH--------HHHHHcCC--EEEEecccccccccccccccCCCCHHHHHHHHHhccc
Confidence 99999999999 6677776 4322 12334555 445544442 2 26799999999997532
Q ss_pred --CeEEEEcCCCC-CC--cCC---hHHHHHHHHHhCCEEEEecccccc---------ccccCCcCC----CC-CCCcEEE
Q 014724 252 --PKLIIAGASAY-PR--DFD---YPRMRQIADAVGALLMMDMAHISG---------LVAASVVAD----PF-KYCDVVT 309 (419)
Q Consensus 252 --pklIi~~~s~~-p~--~~d---l~~I~~ia~~~ga~livD~ah~~G---------l~~~g~~~~----~~-~~~Div~ 309 (419)
+++|++++|+| |+ ..+ +++|+++|++||++||+|++|..| +.+.+.... .+ ...|+++
T Consensus 173 ~~~~~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~ 252 (456)
T 2ez2_A 173 ENIAYICLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCT 252 (456)
T ss_dssp GGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEE
T ss_pred cceeEEEEeccCCCCCCccCCHHHHHHHHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhcccCCEEE
Confidence 38888887777 53 444 899999999999999999998765 333332100 01 2468888
Q ss_pred eCCCCcCCCCCeeEEEEeCCCcchhhHHHHhhhccc--CC--CCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHH
Q 014724 310 TTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVF--PG--LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRA 385 (419)
Q Consensus 310 ~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i~~~~~--~~--~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~ 385 (419)
.|+||++..++||+++++++ ++.+.+..... .+ ..++.+...+++++.++.+... +.+.++..++.++
T Consensus 253 ~S~kk~~~~~~gG~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~~~~~~~---~~~~~~~~~~~~~ 324 (456)
T 2ez2_A 253 MSGKKDCLVNIGGFLCMNDD-----EMFSSAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQ---YEYIEHRVKQVRY 324 (456)
T ss_dssp EETTTTTCCSSCEEEEESCH-----HHHHHHHHHHHHHTCCTTTTTCCHHHHHHHHHHHHHHTC---HHHHHHHHHHHHH
T ss_pred EeCcccCCCCceeEEEECCH-----HHHHHHHHHHhhccCcccccCcchhHHHHHHHHHHHHhH---HHHHHHHHHHHHH
Confidence 88999765457999998543 56555432111 01 1122222233333334333221 4567777888899
Q ss_pred HHHHHHhCCcEEecCCCcceeEEEEeC
Q 014724 386 LASRLVELGYKLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 386 l~~~L~~~G~~v~~~~t~~hlv~vd~~ 412 (419)
+.+.|++.|+++... ...+++|+++.
T Consensus 325 l~~~L~~~g~~~~~p-~~~~~~~~~~~ 350 (456)
T 2ez2_A 325 LGDKLKAAGVPIVEP-VGGHAVFLDAR 350 (456)
T ss_dssp HHHHHHHTTCCBCSS-CCSSEEEEEHH
T ss_pred HHHHHhcCCCccccC-CCceEEEEEhH
Confidence 999999888876542 35688898874
No 157
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.82 E-value=9.2e-20 Score=194.86 Aligned_cols=218 Identities=16% Similarity=0.089 Sum_probs=157.6
Q ss_pred HHHHHHHcCCCCCCCceeEecCChH-HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccC
Q 014724 154 QKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD 232 (419)
Q Consensus 154 ~~~la~~~g~~~~~~~v~V~~~sGt-~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~ 232 (419)
+++++++||.+.. +++++|+ .||.+++.++++|||+|+++.+.|.++.. .+.+.|+ +++.++.+
T Consensus 201 E~~lA~~fGa~~a-----~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~~--------~l~lsGa--~pv~v~~~ 265 (715)
T 3n75_A 201 EQYIARVFNADRS-----YMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTH--------LMMMSDV--TPIYFRPT 265 (715)
T ss_dssp HHHHHHHHTCSEE-----EEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHH--------HHHHSCC--EEEEECCC
T ss_pred HHHHHHHhCCCCc-----eEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHHH--------HHHHcCC--EEEEEecc
Confidence 4778999999872 6668885 79999999999999999999998877642 2345666 34443332
Q ss_pred CCCCC----C-----CHHHHHHHhhhc-C---CeEEEEcCCC-CCCcCChHHHHHHHHHhCCEEEEeccccccccccCCc
Q 014724 233 ESTGL----V-----DYDMLEKTAILF-R---PKLIIAGASA-YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVV 298 (419)
Q Consensus 233 ~~~~~----i-----D~d~Le~~l~~~-~---pklIi~~~s~-~p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~ 298 (419)
.+++. + |+++|+++++++ + |++|++++|+ ++...|+++|.++|++++ |++|+||+.++.+.+..
T Consensus 266 ~~~~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~pn~~G~v~dl~~I~ela~~~~--livDEAH~~~~~f~~~~ 343 (715)
T 3n75_A 266 RNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPIY 343 (715)
T ss_dssp BCTTCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESSCTTSEEECHHHHHHHCCCSE--EEEECTTCTTGGGSGGG
T ss_pred ccccccccCcccccCCHHHHHHHHhhCcCccCceEEEEECCCCCCccCCHHHHHHHhCcCc--EEEccccccccccCCcc
Confidence 22332 4 899999999763 2 3477777664 346789999999998664 79999998876544332
Q ss_pred C--CCCC-C--CcEE---EeCCCCcCCCC-CeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcC
Q 014724 299 A--DPFK-Y--CDVV---TTTTHKSLRGP-RGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQS 369 (419)
Q Consensus 299 ~--~~~~-~--~Div---~~S~hK~l~Gp-rgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~ 369 (419)
+ +.+. + +|++ ++|+||+|+|+ .+|++..+++. ..++++........++|+...++++.+|++.+..
T Consensus 344 ~~~~al~~g~~aD~vii~~~S~hKtL~gltqgs~i~v~~~i-----~~~~~~~~~~~~~STSpsy~~~AsldaA~~~~~~ 418 (715)
T 3n75_A 344 EGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDV-----NEETFNEAYMMHTTTSPHYGIVASTETAAAMMKG 418 (715)
T ss_dssp TTSSTTSSSCCTTCEEEEEECHHHHSSCCTTCEEEEEESCC-----CHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHSH
T ss_pred ccccccccCcCCCEEEEEEecccccccCCCCeeEEEeCchh-----hHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHh
Confidence 2 2333 2 6765 99999999998 67999888741 2233443333333567888889999888887753
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhC
Q 014724 370 PEFKVYQNKVVSNCRALASRLVEL 393 (419)
Q Consensus 370 ~~~~~~~~~v~~n~~~l~~~L~~~ 393 (419)
.+.++++++..+++++|++.|++.
T Consensus 419 ~~g~~~~~~l~~~a~~~r~~L~~i 442 (715)
T 3n75_A 419 NAGKRLINGSIERAIKFRKEIKRL 442 (715)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHHHHHHHHHh
Confidence 346778899999999999999875
No 158
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.82 E-value=8.6e-19 Score=176.57 Aligned_cols=215 Identities=19% Similarity=0.124 Sum_probs=148.7
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccc
Q 014724 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (419)
Q Consensus 142 g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g 221 (419)
|++...+++ +++++++|.+. .+++++|++|+..++.++++|||+|++++|.|+++..... ..+...|
T Consensus 60 ~~~~~~~l~----~~ia~~~g~~~-----~i~~~~g~~ai~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~----~~~~~~g 126 (404)
T 1e5e_A 60 GNPTVSNLE----GKIAFLEKTEA-----CVATSSGMGAIAATVLTILKAGDHLISDECLYGCTHALFE----HALTKFG 126 (404)
T ss_dssp CCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHH----THHHHTT
T ss_pred cChHHHHHH----HHHHHHhCCCc-----EEEeCChHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHH----HHHHHcC
Confidence 445445555 67788888863 3778899999999999999999999999999877542110 0123345
Q ss_pred cccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCChHHHHHHHHH-hCCEEEEeccccccccccCCc
Q 014724 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADA-VGALLMMDMAHISGLVAASVV 298 (419)
Q Consensus 222 ~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~dl~~I~~ia~~-~ga~livD~ah~~Gl~~~g~~ 298 (419)
. +++.++.+ |+++|++.+++ ++|+|++++|+||+ ..|+++|+++|++ +|+++++|++|..+..
T Consensus 127 ~--~~~~v~~~------d~~~l~~~i~~-~t~~v~l~~p~NptG~v~~l~~i~~la~~~~~~~li~De~~~~~~~----- 192 (404)
T 1e5e_A 127 I--QVDFINTA------IPGEVKKHMKP-NTKIVYFETPANPTLKIIDMERVCKDAHSQEGVLVIADNTFCSPMI----- 192 (404)
T ss_dssp C--EEEEECTT------STTHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHTSTTCEEEEECTTTCTTT-----
T ss_pred C--EEEEECCC------CHHHHHHhcCC-CCcEEEEECCCCCCCcccCHHHHHHHHHhhcCCEEEEECCCchhhh-----
Confidence 4 44554432 78999999875 78999999999884 6799999999999 9999999999865532
Q ss_pred CCCCC-CCcEEEeCCCCcCCCC--C-eeEEEEeCCCcchhhHHH-HhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHH
Q 014724 299 ADPFK-YCDVVTTTTHKSLRGP--R-GGMIFFKKDPVLGVELES-AINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK 373 (419)
Q Consensus 299 ~~~~~-~~Div~~S~hK~l~Gp--r-gG~i~~~~~~~~~~~l~~-~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~ 373 (419)
..+++ ++|++++|+||+|.+| | +|++++++ ++.+ .+.........++.+.....+...+++ ..+
T Consensus 193 ~~~~~~~~di~~~S~sK~~~~~g~ri~G~~~~~~------~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~l~-----~~~ 261 (404)
T 1e5e_A 193 TNPVDFGVDVVVHSATKYINGHTDVVAGLICGKA------DLLQQIRMVGIKDITGSVISPHDAWLITRGLS-----TLN 261 (404)
T ss_dssp CCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECH------HHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHT-----THH
T ss_pred CCccccCCEEEEEcCccccCCCCCCeEEEEEECH------HHHHHHHHHHHHhCCCCCCCHHHHHHHHHhHh-----HHH
Confidence 12333 6899999999998654 5 49999987 4555 665543322012222222222222332 234
Q ss_pred HHHHHHHHHHHHHHHHHHhCC
Q 014724 374 VYQNKVVSNCRALASRLVELG 394 (419)
Q Consensus 374 ~~~~~v~~n~~~l~~~L~~~G 394 (419)
.+.++..+|++.+.+.|+++.
T Consensus 262 ~~~~~~~~~~~~l~~~l~~~~ 282 (404)
T 1e5e_A 262 IRMKAESENAMKVAEYLKSHP 282 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHTCT
T ss_pred HHHHHHHHHHHHHHHHHHhCC
Confidence 566677888888999988763
No 159
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.82 E-value=5.8e-19 Score=179.48 Aligned_cols=223 Identities=17% Similarity=0.131 Sum_probs=150.2
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccc
Q 014724 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (419)
Q Consensus 142 g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g 221 (419)
+++..+++| +++++++|.+. .++++||++|+..++.++++|||+|++.++.|++...... ..+...|
T Consensus 80 ~~p~~~~le----~~lA~l~g~~~-----~v~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~----~~~~~~G 146 (430)
T 3ri6_A 80 SNPTVEDLE----QRLKNLTGALG-----VLALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQ----KTLPSFG 146 (430)
T ss_dssp CCHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHH----THHHHTT
T ss_pred CCHHHHHHH----HHHHHHHCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHH----HHHHHcC
Confidence 445556666 67888899865 3788899999999999999999999999999877542110 0122345
Q ss_pred cccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcC
Q 014724 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (419)
Q Consensus 222 ~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~ 299 (419)
. +++.++.+ |++++++.+++ ++|+|++++++||+ ..|+++|+++|+++|++||+|++|..+.. .
T Consensus 147 ~--~~~~v~~~------d~~~l~~ai~~-~t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~livD~a~~~~~~-----~ 212 (430)
T 3ri6_A 147 I--EVRFVDVM------DSLAVEHACDE-TTKLLFLETISNPQLQVADLEALSKVVHAKGIPLVVDTTMTPPYL-----L 212 (430)
T ss_dssp C--EEEEECTT------CHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTSCTTT-----C
T ss_pred C--EEEEeCCC------CHHHHHHhhCC-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence 4 45554332 89999999975 78999999999884 67999999999999999999999876543 2
Q ss_pred CCCC-CCcEEEeCCCCcCCCC---CeeEEEEeCCCcc-----hh---------hHHHHhhhcccCCCCCCChHHHHHHHH
Q 014724 300 DPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDPVL-----GV---------ELESAINNAVFPGLQGGPHNHTIGGLA 361 (419)
Q Consensus 300 ~~~~-~~Div~~S~hK~l~Gp---rgG~i~~~~~~~~-----~~---------~l~~~i~~~~~~~~~g~p~~~~iaala 361 (419)
.+.+ ++|++++|+||+|.|+ .||+++.+..... .. ++..++....... .|+.... +.+ .
T Consensus 213 ~~~~~g~div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i~~~~~~~~~~-~g~~~~~-~~a-~ 289 (430)
T 3ri6_A 213 EAKRLGVDIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFLYKARKEVFQN-LGPSLSP-HNA-Y 289 (430)
T ss_dssp CGGGGTCSEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHHHHHHHTHHHH-HCCCCCH-HHH-H
T ss_pred ChHHcCCEEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhchhhHHHHHHHHHHHh-cCCCCCH-HHH-H
Confidence 3344 7899999999999876 6788886543110 00 0111111110000 1111111 211 1
Q ss_pred HHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcE
Q 014724 362 VCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYK 396 (419)
Q Consensus 362 ~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~ 396 (419)
.++..+ +.+..+.+++.+|++++++.|++. +++
T Consensus 290 l~l~~l--~~l~~r~~~~~~na~~la~~L~~~p~v~ 323 (430)
T 3ri6_A 290 LQSLGL--ETMALRIERSCQNAQELAHWLLSIPQVK 323 (430)
T ss_dssp HHHHHH--HHHHHHHHHHHHHHHHHHHHHTTCTTCE
T ss_pred HHHhhh--hhHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 122222 234566788899999999999886 565
No 160
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.70 E-value=9.3e-22 Score=196.54 Aligned_cols=280 Identities=13% Similarity=0.089 Sum_probs=181.6
Q ss_pred hcccccccCC--CChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCC--CCCCCceeEecCC-h
Q 014724 103 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPLS-G 177 (419)
Q Consensus 103 ~~i~L~~sen--~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~--~~~~~~v~V~~~s-G 177 (419)
+.|+|..++. .+++.+++++.+.+.+. ..+|+. . ..++++.+.+++.+.+|. +++ +|++++ |
T Consensus 32 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~-------~-~~~l~~~la~~l~~~~g~~~~~~----~v~~~~g~ 98 (392)
T 3b1d_A 32 QLLPAWIADMDFEVMPEVKQAIHDYAEQL-VYGYTY-------A-SDELLQAVLDWEKSEHQYSFDKE----DIVFVEGV 98 (392)
Confidence 4566766653 25788999998877432 223332 1 335666667777777774 332 355555 4
Q ss_pred HHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCC--CCCCCHHHHHHHhhhcCCeEE
Q 014724 178 SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES--TGLVDYDMLEKTAILFRPKLI 255 (419)
Q Consensus 178 t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~--~~~iD~d~Le~~l~~~~pklI 255 (419)
++|+.+++.+++++||+|++..|.|.++.. .+...|. +++.++.+++ ++.+|+++|++.+++.++++|
T Consensus 99 ~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~--~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v 168 (392)
T 3b1d_A 99 VPAISIAIQAFTKEGEAVLINSPVYPPFAR--------SVRLNNR--KLVSNSLKEENGLFQIDFEQLENDIVENDVKLY 168 (392)
Confidence 789999999999999999999998876542 2233454 3444444322 356999999999874578998
Q ss_pred EEcCCCCCC--c---CChHHHHHHHHHhCCEEEEeccccccccccCCcCCCC-------CCCcEEEeCCCCcC--CCCCe
Q 014724 256 IAGASAYPR--D---FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-------KYCDVVTTTTHKSL--RGPRG 321 (419)
Q Consensus 256 i~~~s~~p~--~---~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~-------~~~Div~~S~hK~l--~Gprg 321 (419)
++++++||+ . .++++|+++|++||++||+|++|. ++...+....++ ...+++++|+||+| +|+|.
T Consensus 169 ~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~ 247 (392)
T 3b1d_A 169 LLCNPHNPGGRVWEREVLEQIGHLCQKHHVILVSDEIHQ-DLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKN 247 (392)
Confidence 888888874 2 258999999999999999999974 444332111111 12348899999997 67889
Q ss_pred eEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHh-C-CcEEec
Q 014724 322 GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE-L-GYKLVS 399 (419)
Q Consensus 322 G~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~-~-G~~v~~ 399 (419)
|+++++++ ++.+.+.........++++....++...++... ...+++..+++.++++++.+.|++ . |+++..
T Consensus 248 G~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 321 (392)
T 3b1d_A 248 SYAIIENP-----TLCAQFKHQQLVNNHHEVSSLGYIATETAYRYG-KPWLVALKAVLEENIQFAVEYFAQEAPRLKVMK 321 (392)
Confidence 99998763 466655544333221222222233333345432 233567778888889999999987 4 777654
Q ss_pred CCCcceeEEEEeCC
Q 014724 400 GGSDNHLVLVDLRP 413 (419)
Q Consensus 400 ~~t~~hlv~vd~~~ 413 (419)
+ ..+.++|+++..
T Consensus 322 ~-~~~~~~~i~~~~ 334 (392)
T 3b1d_A 322 P-QGTYLIWLDFSD 334 (392)
Confidence 2 344556777754
No 161
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.81 E-value=1.6e-19 Score=181.26 Aligned_cols=302 Identities=16% Similarity=0.167 Sum_probs=172.3
Q ss_pred hccccccChh-HHHHHHHHHHHh-hhcccccccC--CC-ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHH
Q 014724 80 DYSLGEADPE-VCEIITKEKERQ-FKSLELIASE--NF-TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQ 154 (419)
Q Consensus 80 ~~~l~~~~~~-~~~~~~~e~~r~-~~~i~L~~se--n~-~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~ 154 (419)
..++..++|+ ++.+.+..+... .+.|+|..+. ++ .++.+.+++.+... ....+|.. ..|. .++++.+.
T Consensus 17 ~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~a~~~a~~-~~~~~y~~---~~g~---~~lr~~ia 89 (409)
T 4eu1_A 17 QGPGSMGKPDPILGLGQDFRMDPAKRKVNLSIGVYRDDADQPFVLECVKQATL-GTNMDYAP---VTGI---ASFVEEAQ 89 (409)
T ss_dssp ----------CHHHHHHHHHHCCCSSCEECCCSSCCCTTSCCCCCHHHHTCCC-CSCCCCCC---TTCC---HHHHHHHH
T ss_pred hhcCCCCCCChHHHHHHHHhhCCCcCceeeeeeEEECCCCCEeecHHHHhcCc-cccccCCC---CCCc---HHHHHHHH
Confidence 3567778887 677777655433 4568887765 33 45667777765522 12223432 1222 35554443
Q ss_pred HHHHHHcCCC-----CCCCcee-EecCChHHHHHHH---HHHccCCCCEEEEeCCCCCccccCccccccccccccccccE
Q 014724 155 KRALAAFNLD-----ENKWGVN-VQPLSGSPANFEV---YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFE 225 (419)
Q Consensus 155 ~~la~~~g~~-----~~~~~v~-V~~~sGt~A~~~~---~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~ 225 (419)
+++ +|.+ +++ +. +++.+|+.|+..+ +.+++++||+|++.+|.|.++.. .+...|. +
T Consensus 90 ~~~---~~~~~~~~~~~~--i~~~~~~~g~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~--------~~~~~g~--~ 154 (409)
T 4eu1_A 90 KLC---FGPTCAALRDGR--IASCQTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPNHES--------IFAKAGM--E 154 (409)
T ss_dssp HHH---HCSSCHHHHTTC--EEEEEESHHHHHHHHHHHHGGGTSSSCCEEEEESSCCTHHHH--------HHHHTTC--E
T ss_pred HHH---cCCCchhhccCc--eeeeecccchHHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHH--------HHHHcCC--e
Confidence 333 3655 221 21 2355667777654 45567899999999999877642 2344565 4
Q ss_pred EEecccC-CCCCCCCHHHHHHHhhhc--CCeEEEEcCCCCCC--cCC---hHHHHHHHHHhCCEEEEeccccccccccCC
Q 014724 226 SMPYRLD-ESTGLVDYDMLEKTAILF--RPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASV 297 (419)
Q Consensus 226 ~v~~~~~-~~~~~iD~d~Le~~l~~~--~pklIi~~~s~~p~--~~d---l~~I~~ia~~~ga~livD~ah~~Gl~~~g~ 297 (419)
+++++++ ++++.+|+++|++.+++. +++++++++|+||+ ..+ +++|+++|++||++||+|++| .++.+.+.
T Consensus 155 ~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y-~~~~~~~~ 233 (409)
T 4eu1_A 155 LTPYSYYDPATKGLNLAGMLECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAY-QGFATGQL 233 (409)
T ss_dssp EEEECCEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESC-TTTTTSCH
T ss_pred EEEEEeecCcCCcCcHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccc-cccccCCc
Confidence 4454442 346789999999999742 45677779999985 334 667999999999999999995 44443321
Q ss_pred ---cCC--CC-C-C-CcEEEeCCCCcC--CCCCeeEE--EEeCCCcchhh----HHHHhhhcccCCCCCCChHHHHHHHH
Q 014724 298 ---VAD--PF-K-Y-CDVVTTTTHKSL--RGPRGGMI--FFKKDPVLGVE----LESAINNAVFPGLQGGPHNHTIGGLA 361 (419)
Q Consensus 298 ---~~~--~~-~-~-~Div~~S~hK~l--~GprgG~i--~~~~~~~~~~~----l~~~i~~~~~~~~~g~p~~~~iaala 361 (419)
... .+ + . ..++++|++|+| +|.|.|++ +..++ + +.+.+.........+.+ .....+..
T Consensus 234 ~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~riG~~~~v~~~~-----~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~ 307 (409)
T 4eu1_A 234 DYDAFVPRHLVDMVPNLIVAQSFSKNFGLYGHRCGALHISTASA-----EEAKRLVSQLALLIRPMYNNPP-LYGAWVVS 307 (409)
T ss_dssp HHHTHHHHHHHTTSSCCEEEEECTTTSSCGGGCCEEEEEECSSH-----HHHHHHHHHHHHHHHHHHSSCC-HHHHHHHH
T ss_pred ccchHHHHHHHhhCCcEEEEecCcccccCccCCceEEEEEeCCH-----HHHHHHHHHHHHHHhhhcCCCC-hHHHHHHH
Confidence 000 01 1 2 237899999987 57888997 55442 4 44444332211222222 22222333
Q ss_pred HHHHHhc-----ChHHHHHHHHHHHHHHHHHHHHHhCC----cEEecCCCcceeEEEEe
Q 014724 362 VCLKHAQ-----SPEFKVYQNKVVSNCRALASRLVELG----YKLVSGGSDNHLVLVDL 411 (419)
Q Consensus 362 ~al~~~~-----~~~~~~~~~~v~~n~~~l~~~L~~~G----~~v~~~~t~~hlv~vd~ 411 (419)
.++.... ....++..+++.++++++.+.|++.| +++... ....++|+++
T Consensus 308 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~-~~~~~~~~~~ 365 (409)
T 4eu1_A 308 SILKDPQLTALWKKELKQMSSRIAEVRKRLVSELKACGSVHDWSHIER-QVGMMAYTGL 365 (409)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHH-SCSSEEECCC
T ss_pred HHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceecC-CceEEEEeCC
Confidence 3443210 12346677889999999999999987 655432 2334566554
No 162
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.81 E-value=1.4e-18 Score=174.38 Aligned_cols=212 Identities=22% Similarity=0.238 Sum_probs=148.3
Q ss_pred hhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCcccccccccccccc
Q 014724 143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 222 (419)
Q Consensus 143 ~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~ 222 (419)
++...+++ +++++++|.+. .++++||++|+..++.+++++||+|++.++.|++...... ......|.
T Consensus 65 ~~~~~~l~----~~la~~~g~~~-----~~~~~sGt~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~~----~~~~~~g~ 131 (392)
T 3qhx_A 65 NPTRTALE----AALAAVEDAAF-----GRAFSSGMAAADCALRAMLRPGDHVVIPDDAYGGTFRLID----KVFTGWNV 131 (392)
T ss_dssp CHHHHHHH----HHHHHHTTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHH----HTGGGGTC
T ss_pred ChHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHH----HHHHhcCc
Confidence 44444554 67888999874 3778899999999999999999999999999876532110 01123343
Q ss_pred ccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcCC
Q 014724 223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD 300 (419)
Q Consensus 223 ~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~ 300 (419)
++..++. .|++++++.+++ ++++|++.+++||+ ..|+++|+++|++||+++|+|++|..+.. ..
T Consensus 132 --~~~~v~~------~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li~D~~~~~~~~-----~~ 197 (392)
T 3qhx_A 132 --EYTPVAL------ADLDAVRAAIRP-TTRLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDNTFASPAL-----QQ 197 (392)
T ss_dssp --EEEEECT------TCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTT-----CC
T ss_pred --EEEEeCC------CCHHHHHHhhCC-CCeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEEEECCCccccc-----CC
Confidence 4555443 289999999975 78999999988874 67999999999999999999999865422 22
Q ss_pred CCC-CCcEEEeCCCCcCCCC---CeeEEEEeCCCcchhhHHHHhhhccc-CCCCCCChHHHHHHHHHHHHHhcChHHHHH
Q 014724 301 PFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDPVLGVELESAINNAVF-PGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 375 (419)
Q Consensus 301 ~~~-~~Div~~S~hK~l~Gp---rgG~i~~~~~~~~~~~l~~~i~~~~~-~~~~g~p~~~~iaala~al~~~~~~~~~~~ 375 (419)
+++ ++|+++.|+||++.|+ ++|+++.+++ ++.+.+..... .+...+| ... ..++..+. .+...
T Consensus 198 ~~~~~~di~~~S~sK~lg~~g~~~~G~v~~~~~-----~~~~~l~~~~~~~g~~~~~--~~~---~~~~~~l~--~l~~~ 265 (392)
T 3qhx_A 198 PLSLGADVVLHSTTKYIGGHSDVVGGALVTNDE-----ELDQSFAFLQNGAGAVPGP--FDA---YLTMRGLK--TLVLR 265 (392)
T ss_dssp GGGGTCSEEEEETTTTTTCSSCCCCEEEEESCH-----HHHHHHHHHHHHHCCCCCH--HHH---HHHHHHHT--THHHH
T ss_pred hHHhCCcEEEEcCccccCCCCCceEEEEEECcH-----HHHHHHHHHHHhcCCCCCH--HHH---HHHHhhhh--HHHHH
Confidence 334 7899999999999653 5899998863 56555543221 1211122 111 11222222 24566
Q ss_pred HHHHHHHHHHHHHHHHhC
Q 014724 376 QNKVVSNCRALASRLVEL 393 (419)
Q Consensus 376 ~~~v~~n~~~l~~~L~~~ 393 (419)
.+++.++++++.+.|++.
T Consensus 266 ~~~~~~~~~~l~~~L~~~ 283 (392)
T 3qhx_A 266 MQRHSENAAAVAEFLAEH 283 (392)
T ss_dssp HHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHhcC
Confidence 788889999999999885
No 163
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.81 E-value=2.2e-19 Score=178.98 Aligned_cols=288 Identities=15% Similarity=0.124 Sum_probs=170.2
Q ss_pred hhcccccccC----CC---ChHHHHHHHhh-hhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCC--CCCCCcee
Q 014724 102 FKSLELIASE----NF---TSRAVMEAVGS-CLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVN 171 (419)
Q Consensus 102 ~~~i~L~~se----n~---~~~~V~eal~~-~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~--~~~~~~v~ 171 (419)
.+.|+|..+. +. +++.|++++.+ .+.+....+|+.. .|. .++++.+.+++....+. +++. ++
T Consensus 26 ~~~i~l~~g~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~---~g~---~~lr~~la~~~~~~~~~~~~~~~--~~ 97 (397)
T 3fsl_A 26 SDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLPM---EGL---NCYRHAIAPLLFGADHPVLKQQR--VA 97 (397)
T ss_dssp SCCEECSSCCCCCTTSCCCCCHHHHHHHHHHHHSCCCCCCCCCT---TCC---HHHHHHHHHHHHCTTCHHHHTTC--EE
T ss_pred CCeEEEeeeEEECCCCCccCcHHHHHHHHhhccCccccccCCCC---Cch---HHHHHHHHHHHhcCCcccccccc--eE
Confidence 3458887772 22 34899999998 7754323344431 232 24554444444333221 2211 13
Q ss_pred EecCC-hHHHHHHH--HHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhh
Q 014724 172 VQPLS-GSPANFEV--YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAI 248 (419)
Q Consensus 172 V~~~s-Gt~A~~~~--~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~ 248 (419)
|++++ |++|+..+ +.++++|||+|++.+|.|.++.. .+...|..+..+++. +++++.+|+++|++.++
T Consensus 98 i~~t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~~~~~-~~~~~~~d~~~l~~~l~ 168 (397)
T 3fsl_A 98 TIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVA--------IFAGAGFEVSTYPWY-DEATNGVRFNDLLATLK 168 (397)
T ss_dssp EEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHH--------HHHHTTCCEEEECCE-ETTTTEECHHHHHHHHT
T ss_pred EEEcCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhHHH--------HHHHcCCceEEEeee-eccCCcCcHHHHHHHHH
Confidence 44555 57799888 45678999999999998876531 233456544444431 22467899999999997
Q ss_pred hc--CCeEEEEcCCCCCC--c---CChHHHHHHHHHhCCEEEEeccccccccccCC--cCC--CC---CCCcEEEeCCCC
Q 014724 249 LF--RPKLIIAGASAYPR--D---FDYPRMRQIADAVGALLMMDMAHISGLVAASV--VAD--PF---KYCDVVTTTTHK 314 (419)
Q Consensus 249 ~~--~pklIi~~~s~~p~--~---~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~--~~~--~~---~~~Div~~S~hK 314 (419)
+. +++++++++++||+ . .++++|+++|++||++||+|++|. ++...+. ... .+ ....++++|+||
T Consensus 169 ~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 247 (397)
T 3fsl_A 169 TLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQ-GFGAGMEEDAYAIRAIASAGLPALVSNSFSK 247 (397)
T ss_dssp TCCTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCT-TSSSCTTGGGHHHHHHHHTTCCEEEEEECTT
T ss_pred hCCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCch-hhccCcccccHHHHHHHhcCCCEEEEecccc
Confidence 42 46788888899885 3 346799999999999999999963 4443210 000 01 134588999999
Q ss_pred cC--CCCCeeEEEEeCCCcchhhHHHHh----hhcccCCCCCCChHHHHHHHHHHHHHh-----cChHHHHHHHHHHHHH
Q 014724 315 SL--RGPRGGMIFFKKDPVLGVELESAI----NNAVFPGLQGGPHNHTIGGLAVCLKHA-----QSPEFKVYQNKVVSNC 383 (419)
Q Consensus 315 ~l--~GprgG~i~~~~~~~~~~~l~~~i----~~~~~~~~~g~p~~~~iaala~al~~~-----~~~~~~~~~~~v~~n~ 383 (419)
++ +|.|.|+++...... ++.+++ .........+.+. ...++++.++... .....++..+++.+++
T Consensus 248 ~~~~~G~riG~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~ 323 (397)
T 3fsl_A 248 IFSLYGERVGGLSVMCEDA---EAAGRVLGQLKATVRRNYSSPPN-FGAQVVAAVLNDEALKASWLKEVEEMRTRILAMR 323 (397)
T ss_dssp TTTCGGGCCEEEEEECSSH---HHHHHHHHHHHHHHHTTTSSCCS-HHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCcCCCeeEEEEecCCH---HHHHHHHHHHHHHHHhccCCCCH-HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 97 588889998632110 333322 2111112222222 2222222222211 1133567788889999
Q ss_pred HHHHHHHHhC----CcEEecCCCcceeEEEEeC
Q 014724 384 RALASRLVEL----GYKLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 384 ~~l~~~L~~~----G~~v~~~~t~~hlv~vd~~ 412 (419)
+++.+.|++. |+++... ....++|+++.
T Consensus 324 ~~l~~~L~~~~~~~~~~~~~~-~~~~~~~~~~~ 355 (397)
T 3fsl_A 324 QELVKVLSTEMPERNFDYLLN-QRGMFSYTGLS 355 (397)
T ss_dssp HHHHHHHHHHCTTSCCTHHHH-CCSSEEECCCC
T ss_pred HHHHHHHHhcCCCCCceeecC-CceEEEecCCC
Confidence 9999999886 6765542 23345676653
No 164
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.81 E-value=5.9e-19 Score=176.80 Aligned_cols=273 Identities=13% Similarity=0.122 Sum_probs=163.9
Q ss_pred hcccccccCC--CChHHHHHHHhhhhhccC----CCCCCCCCCCCchhHHHHHHHHHHHHHHHH--cC-CCCCCCceeEe
Q 014724 103 KSLELIASEN--FTSRAVMEAVGSCLTNKY----SEGLPGKRYYGGNEYIDELETLCQKRALAA--FN-LDENKWGVNVQ 173 (419)
Q Consensus 103 ~~i~L~~sen--~~~~~V~eal~~~l~~~y----~~g~p~~r~~~g~~~~~~lE~~~~~~la~~--~g-~~~~~~~v~V~ 173 (419)
+.|+|..+++ .+++.|++++.+.+.... ..+|+.. .| ..+++ +.++++ +| ++++ +|+
T Consensus 34 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~---~g---~~~lr----~~la~~l~~g~~~~~----~v~ 99 (400)
T 3asa_A 34 TVINLSIGDTTQPLNASVAEAFASSIARLSSPTTCRGYGPD---FG---LPALR----QKLSEDFYRGFVDAK----EIF 99 (400)
T ss_dssp CCEECSSCCCCCCCCHHHHHHHHHHHHHHTSSSCCCCCCCT---TC---CHHHH----HHHHHTTSTTSSCGG----GEE
T ss_pred ceEeccCCCCCCCCCHHHHHHHHHHHhcccccccccCCCCC---CC---CHHHH----HHHHHHHHcCCCCHH----HEE
Confidence 4578877764 368999999988764311 1123211 12 23454 456666 47 5543 355
Q ss_pred cCCh-HHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccc-cEEEecccCCC-CCCCCHHHHHHHhhhc
Q 014724 174 PLSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDES-TGLVDYDMLEKTAILF 250 (419)
Q Consensus 174 ~~sG-t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~-~~~v~~~~~~~-~~~iD~d~Le~~l~~~ 250 (419)
+++| ++++..+. .+++|||+|++.+|.|.++.. .+...|.. +..++ .+++ +...|+++ + .
T Consensus 100 ~~~G~~~al~~~~-~~~~~gd~Vl~~~p~y~~~~~--------~~~~~g~~~~~~~~--~~~~~~~~~~l~~----~--~ 162 (400)
T 3asa_A 100 ISDGAKVDLFRLL-SFFGPNQTVAIQDPSYPAYLD--------IARLTGAKEIIALP--CLQENAFFPEFPE----D--T 162 (400)
T ss_dssp EESCHHHHHHHHH-HHHCSSCEEEEEESCCHHHHH--------HHHHTTCSEEEEEE--CCGGGTTCCCCCT----T--C
T ss_pred EccChHHHHHHHH-HHcCCCCEEEECCCCcHHHHH--------HHHHcCCcceEecc--cchhcCcccChhh----c--c
Confidence 5555 66887754 566899999999998866531 12344553 34444 4322 23344322 1 4
Q ss_pred CCeEEEEcCCCCCC--cCC---hHHHHHHHHHhCCEEEEeccccccccccCCcCCCC---CC---CcEEEeCCCCcC--C
Q 014724 251 RPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KY---CDVVTTTTHKSL--R 317 (419)
Q Consensus 251 ~pklIi~~~s~~p~--~~d---l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~---~~---~Div~~S~hK~l--~ 317 (419)
++++|++++++||+ ..+ +++|+++|+++|++||+|++|. ++...+..+.++ +. .+++++|+||+| +
T Consensus 163 ~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 241 (400)
T 3asa_A 163 HIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYS-TFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFA 241 (400)
T ss_dssp CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTG-GGCCCTTSCSSGGGSTTGGGTEEEEEECCGGGTTT
T ss_pred CccEEEEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhh-hhhcCCCCCCchhhCCCCCCceEEEecchhhcCCc
Confidence 78999988889885 334 6788999999999999999974 343333211112 21 348899999987 6
Q ss_pred CCCeeEEEEeCCCcch--hhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCc
Q 014724 318 GPRGGMIFFKKDPVLG--VELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGY 395 (419)
Q Consensus 318 GprgG~i~~~~~~~~~--~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~ 395 (419)
|.|.|+++++++.... .. .+.+.........++++....+++..+++.. +.++..+++.++++++.+.|++.|+
T Consensus 242 GlriG~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~l~~~L~~~g~ 317 (400)
T 3asa_A 242 GIRLGWTVIPQELTYADGHF-VIQDWERFLSTTFNGASIPAQEAGVAGLSIL---PQLEAIHYYRENSDLLRKALLATGF 317 (400)
T ss_dssp TCCCEEEECCTTCBCTTSCB-HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHT---TTCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred chheeEEeeChhhccchhhh-HHHHHHHHhccCccCCChHHHHHHHHHhCcH---HHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 7888999988742000 00 2222110000011122333344444455543 3456678888899999999999999
Q ss_pred EEecCCCcceeEEEE-eC
Q 014724 396 KLVSGGSDNHLVLVD-LR 412 (419)
Q Consensus 396 ~v~~~~t~~hlv~vd-~~ 412 (419)
++..+ ...+++|++ +.
T Consensus 318 ~~~~~-~~~~~~~~~~~~ 334 (400)
T 3asa_A 318 EVFGG-EHAPYLWVKPTQ 334 (400)
T ss_dssp EEEEC-SSSSEEEEECCC
T ss_pred eeeCC-CCceEEEEeccC
Confidence 88753 345678998 64
No 165
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.81 E-value=8.6e-19 Score=181.43 Aligned_cols=272 Identities=11% Similarity=0.012 Sum_probs=169.5
Q ss_pred CChHHHHHHHhhhhhccC---CCCCCCCCCCCchhHHHHHHHHHHHHHHHHcC-CCCCCCceeEecCC-hHHHHHHHHHH
Q 014724 113 FTSRAVMEAVGSCLTNKY---SEGLPGKRYYGGNEYIDELETLCQKRALAAFN-LDENKWGVNVQPLS-GSPANFEVYTA 187 (419)
Q Consensus 113 ~~~~~V~eal~~~l~~~y---~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g-~~~~~~~v~V~~~s-Gt~A~~~~~~a 187 (419)
..|..+++++.+.+.... ..+|+.. .|. .++++.+.+++.+.+| ++.+ . .+|++++ +++|+..++.+
T Consensus 101 ~~P~~~~~~~~~~l~~~~~~~~~~Y~~~---~G~---~~lr~~ia~~~~~~~gG~~~~-~-~~i~~t~G~~~ai~~~~~~ 172 (498)
T 3ihj_A 101 SFPEDAKKRARRILQACGGNSLGSYSAS---QGV---NCIREDVAAYITRRDGGVPAD-P-DNIYLTTGASDGISTILKI 172 (498)
T ss_dssp SSCHHHHHHHHHHHHHC----------C---CSC---HHHHHHHHHHHHHHTTTCCCC-G-GGEEEESSHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHhccCCCCCCCCCC---CCH---HHHHHHHHHHHHHhcCCCCCC-c-ccEEEcCCHHHHHHHHHHH
Confidence 345666666666554321 1233321 232 3566667778877774 5421 1 1344555 56799999999
Q ss_pred ccCCCC----EEEEeCCCCCccccCccccccccccccccccEEEecccCCC-CCCCCHHHHHHHhhhc----CCeEEEEc
Q 014724 188 ILKPHD----RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILF----RPKLIIAG 258 (419)
Q Consensus 188 ll~pGD----~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~-~~~iD~d~Le~~l~~~----~pklIi~~ 258 (419)
++++|| +|+++.|.|.++.. .+...|. +.++|+++++ ++.+|+++|++.+++. ++|+|++.
T Consensus 173 l~~~gd~~~d~Vlv~~p~y~~~~~--------~~~~~g~--~~v~~~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~l~ 242 (498)
T 3ihj_A 173 LVSGGGKSRTGVMIPIPQYPLYSA--------VISELDA--IQVNYYLDEENCWALNVNELRRAVQEAKDHCDPKVLCII 242 (498)
T ss_dssp HCCCCGGGSEEEEEEESCCTHHHH--------HHHHTTC--EEEEEECBGGGTTBCCHHHHHHHHHHHTTTSEEEEEEEE
T ss_pred HcCCCCCCCCEEEEeCCCchhHHH--------HHHHcCC--EEEEeeccccccCCCCHHHHHHHHHhhhccCCCeEEEEE
Confidence 999986 99999998876542 2334554 5566656543 5689999999999764 58999888
Q ss_pred CCCCCC--c---CChHHHHHHHHHhCCEEEEeccccccccccCC-cCCCCC------------CC-cEEEeCCCCcC---
Q 014724 259 ASAYPR--D---FDYPRMRQIADAVGALLMMDMAHISGLVAASV-VADPFK------------YC-DVVTTTTHKSL--- 316 (419)
Q Consensus 259 ~s~~p~--~---~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~-~~~~~~------------~~-Div~~S~hK~l--- 316 (419)
+|+||+ . .++++|.++|++||++||+|++|. .+++.+. ...++. .. -++++|+||+|
T Consensus 243 np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~-~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~ 321 (498)
T 3ihj_A 243 NPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQ-DNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGE 321 (498)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTT-TCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCC
T ss_pred CCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCcc-ccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccC
Confidence 999985 2 347889999999999999999964 4443321 111111 11 26789999998
Q ss_pred CCCCeeEEEE--eCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHH----------HhcChHHHHHHHHHHHHHH
Q 014724 317 RGPRGGMIFF--KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLK----------HAQSPEFKVYQNKVVSNCR 384 (419)
Q Consensus 317 ~GprgG~i~~--~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~----------~~~~~~~~~~~~~v~~n~~ 384 (419)
+|.|+||++. .++ ++.+.+....... ..++.....++..++. +.. .+.++..+++.++++
T Consensus 322 ~G~R~G~~~~~~~~~-----~l~~~l~~~~~~~--~~~~~~~q~a~~~~l~~~~~g~~~~~~~~-~~~~~~~~~l~~~~~ 393 (498)
T 3ihj_A 322 CGYRGGYMEVINLHP-----EIKGQLVKLLSVR--LCPPVSGQAAMDIVVNPPVAGEESFEQFS-REKESVLGNLAKKAK 393 (498)
T ss_dssp SSSCCEEEEEESCCH-----HHHHHHHHHHHHS--CCCCHHHHHHHHHHTCCCCTTSTTHHHHH-HHHHHHHHHHHHHHH
T ss_pred cccceEEEEEecCCH-----HHHHHHHHHHhcc--CCCCHHHHHHHHHHhcCCccCcccHHHHH-HHHHHHHHHHHHHHH
Confidence 5889999984 222 5666654432211 1222333333333332 111 123455677888999
Q ss_pred HHHHHHHhC-CcEEecCCCcceeEEEEeC
Q 014724 385 ALASRLVEL-GYKLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 385 ~l~~~L~~~-G~~v~~~~t~~hlv~vd~~ 412 (419)
++.+.|++. |+++... ....++|+++.
T Consensus 394 ~l~~~L~~~~g~~~~~p-~gg~~~~~~l~ 421 (498)
T 3ihj_A 394 LTEDLFNQVPGIHCNPL-QGAMYAFPRIF 421 (498)
T ss_dssp HHHHHHHTSTTEECCCC-CBSSEECCEEC
T ss_pred HHHHHHhcCCCcEecCC-CeEEEEEEecc
Confidence 999999997 8887653 33445676664
No 166
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.81 E-value=5.7e-19 Score=177.18 Aligned_cols=308 Identities=14% Similarity=0.112 Sum_probs=178.8
Q ss_pred ccccccChhHHHHHHHHHHH--hhhcccccccC--C-----CChHHHHHHHhhhhhcc-CCCCCCCCCCCCchhHHHHHH
Q 014724 81 YSLGEADPEVCEIITKEKER--QFKSLELIASE--N-----FTSRAVMEAVGSCLTNK-YSEGLPGKRYYGGNEYIDELE 150 (419)
Q Consensus 81 ~~l~~~~~~~~~~~~~e~~r--~~~~i~L~~se--n-----~~~~~V~eal~~~l~~~-y~~g~p~~r~~~g~~~~~~lE 150 (419)
+++..+++..+..+.+.... ..+.|+|..+. + ++++.|++++.+.+... ...+|.. ..| ..+++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~---~~g---~~~lr 80 (412)
T 1ajs_A 7 AEVPQAQPVLVFKLIADFREDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLP---ILG---LAEFR 80 (412)
T ss_dssp TTCCCCCCCHHHHHHHHHHTCCCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCC---TTC---CHHHH
T ss_pred hhCcccCCchHHHHHHHHhhcCCCCceeeccceecCCCCCccccHHHHHHHHHhhhChhhccCCCC---CCC---CHHHH
Confidence 34556666644433333222 14567887765 2 35689999998876221 1223421 112 23555
Q ss_pred HHHHHHHHHHcCC--CCCCCceeEe--cCChHHHHHHHH--HHccCCC-----CEEEEeCCCCCccccCccccccccccc
Q 014724 151 TLCQKRALAAFNL--DENKWGVNVQ--PLSGSPANFEVY--TAILKPH-----DRIMGLDLPHGGHLSHGFMTPKRRVSG 219 (419)
Q Consensus 151 ~~~~~~la~~~g~--~~~~~~v~V~--~~sGt~A~~~~~--~all~pG-----D~Vl~~~~~~~g~~s~~~~~~~~~i~~ 219 (419)
+.+.+++...+|. ++++ + ++ +.+|++|+..++ .++++|| |+|++++|.|.++.. .+..
T Consensus 81 ~~la~~~~~~~~~~~~~~~--v-~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~--------~~~~ 149 (412)
T 1ajs_A 81 TCASRLALGDDSPALQEKR--V-GGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNG--------VFTT 149 (412)
T ss_dssp HHHHHHHHCTTCHHHHTTC--E-EEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHH--------HHHH
T ss_pred HHHHHHHhcCCCCccCCCc--E-EEEECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHH--------HHHH
Confidence 4443433322222 3321 2 33 555678999885 4557899 999999998877532 2234
Q ss_pred cccc-cEEEecccCCCCCCCCHHHHHHHhhhc--CCeEEEEcCCCCCC--c---CChHHHHHHHHHhCCEEEEecccccc
Q 014724 220 TSIY-FESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAGASAYPR--D---FDYPRMRQIADAVGALLMMDMAHISG 291 (419)
Q Consensus 220 ~g~~-~~~v~~~~~~~~~~iD~d~Le~~l~~~--~pklIi~~~s~~p~--~---~dl~~I~~ia~~~ga~livD~ah~~G 291 (419)
.|.. +..+++.. ++++.+|+++|++.+.+. ++++|++++++||+ . .++++|+++|++||++||+|++| .+
T Consensus 150 ~g~~~~~~~~~~~-~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y-~~ 227 (412)
T 1ajs_A 150 AGFKDIRSYRYWD-TEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAY-QG 227 (412)
T ss_dssp TTCSCEEEEECEE-TTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESC-TT
T ss_pred cCCceeEEEeeec-CCCCccCHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccc-cc
Confidence 5554 44444321 145789999999998764 45677789999985 2 24678999999999999999995 34
Q ss_pred ccccC---CcCC--CCC---CCcEEEeCCCCcC--CCCCeeEEEE---eCCCcchhhHHHHhhhcccCCCCCCChHHHHH
Q 014724 292 LVAAS---VVAD--PFK---YCDVVTTTTHKSL--RGPRGGMIFF---KKDPVLGVELESAINNAVFPGLQGGPHNHTIG 358 (419)
Q Consensus 292 l~~~g---~~~~--~~~---~~Div~~S~hK~l--~GprgG~i~~---~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~ia 358 (419)
+...+ .... .+. ..+++++|+||++ +|.|.|++++ +++.. ..+.+.+........ ++++....+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~ 304 (412)
T 1ajs_A 228 FASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSI--LRVLSQMQKIVRVTW-SNPPAQGAR 304 (412)
T ss_dssp TTTSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCEEEEEEECSSHHHH--HHHHHHHHHHHHTTT-SSCCSHHHH
T ss_pred ccCCcccccchHHHHHhccCCcEEEEEecccccCCCCcceEEEEEecCCHHHH--HHHHHHHHHHHhccc-CCCChHHHH
Confidence 44332 1100 011 1238899999987 3678899998 44100 013333433111111 222223333
Q ss_pred HHHHHHHHhc-----ChHHHHHHHHHHHHHHHHHHHHHhCC----cEEecCCCcceeEEEEe
Q 014724 359 GLAVCLKHAQ-----SPEFKVYQNKVVSNCRALASRLVELG----YKLVSGGSDNHLVLVDL 411 (419)
Q Consensus 359 ala~al~~~~-----~~~~~~~~~~v~~n~~~l~~~L~~~G----~~v~~~~t~~hlv~vd~ 411 (419)
++..+++... ....++..+++.++++++.+.|++.| +++..+ ....++|+++
T Consensus 305 a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~-~~~~~~~~~~ 365 (412)
T 1ajs_A 305 IVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTPGTWNHITD-QIGMFSFTGL 365 (412)
T ss_dssp HHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHH-CCSSEEECCC
T ss_pred HHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeEEcC-CCceEEEeCC
Confidence 3344554321 12456778888999999999999886 665532 2334566654
No 167
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.81 E-value=4e-19 Score=179.51 Aligned_cols=300 Identities=14% Similarity=0.036 Sum_probs=175.7
Q ss_pred hhccccccChhHHHHHHHHHHHhhhcccccccCCC-----ChHHHHHHHhhhhh--cc-CCCCCCCCCCCCchhHHHHHH
Q 014724 79 VDYSLGEADPEVCEIITKEKERQFKSLELIASENF-----TSRAVMEAVGSCLT--NK-YSEGLPGKRYYGGNEYIDELE 150 (419)
Q Consensus 79 ~~~~l~~~~~~~~~~~~~e~~r~~~~i~L~~sen~-----~~~~V~eal~~~l~--~~-y~~g~p~~r~~~g~~~~~~lE 150 (419)
..+.|......++....+.+. +...|+|..+++. +++.+++++.+.+. .. ...+|+.. .|. .+++
T Consensus 10 ~~~~l~~~~~~~~~~~~~l~~-~~~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~Y~~~---~G~---~~lr 82 (422)
T 3d6k_A 10 DAARLAQVREEVTAKYAELKA-KNLSLDLTRGKPSAEQLDLSNDLLSLPGGDFRTKDGVDCRNYGGL---LGI---ADIR 82 (422)
T ss_dssp --------CHHHHHHHHHHHH-TTCCEECCCCSCCHHHHHTTGGGGGCSTTCCBCTTCCBTTSSCCS---SCC---HHHH
T ss_pred CHHHHHhhHHHHHHHHHHHhc-cCCeEeCCCCCCChhhCCCcHHHHHHHHHHHhhccchhhhCCCCC---CCC---HHHH
Confidence 345566777777776554433 3446888888763 34577777765421 11 12244431 122 2444
Q ss_pred HHHHHHHHHHcCCCCCCCceeEecCCh-HHHH--HHHHHHccCC------------CCEEEEeCCCCCccccCccccccc
Q 014724 151 TLCQKRALAAFNLDENKWGVNVQPLSG-SPAN--FEVYTAILKP------------HDRIMGLDLPHGGHLSHGFMTPKR 215 (419)
Q Consensus 151 ~~~~~~la~~~g~~~~~~~v~V~~~sG-t~A~--~~~~~all~p------------GD~Vl~~~~~~~g~~s~~~~~~~~ 215 (419)
+.++++++++++ +|++++| ++++ ..++.++.++ +|+|++.+|.|.++..
T Consensus 83 ----~~ia~~~~~~~~----~i~~t~G~~~al~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~-------- 146 (422)
T 3d6k_A 83 ----ELWAEALGLPAD----LVVAQDGSSLNIMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHFT-------- 146 (422)
T ss_dssp ----HHHHHHHTCCGG----GEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHH--------
T ss_pred ----HHHHHHhCCChh----HEEEecchHHHHHHHHHHHHhcCcccccccccccCCCCEEEEeCCccHHHHH--------
Confidence 566777888864 3566666 5676 5666777665 3589999998876542
Q ss_pred cccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEE-EcCCCCCC--cCChH---HHHHHHH-HhCCEEEEeccc
Q 014724 216 RVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLII-AGASAYPR--DFDYP---RMRQIAD-AVGALLMMDMAH 288 (419)
Q Consensus 216 ~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi-~~~s~~p~--~~dl~---~I~~ia~-~~ga~livD~ah 288 (419)
.+...|. +++++++++ ++ +|+++|++.+++.++|+|+ +++++||+ ..+.+ +|.++|+ +||++||+|++|
T Consensus 147 ~~~~~g~--~~~~v~~~~-~g-~d~~~l~~~l~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y 222 (422)
T 3d6k_A 147 ITEHFGF--EMINVPMTD-EG-PDMGVVRELVKDPQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAY 222 (422)
T ss_dssp HHHHHTC--EEEEEEEET-TE-ECHHHHHHHHTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTT
T ss_pred HHHHcCC--EEEecCCCC-CC-CCHHHHHHHHhcCCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCc
Confidence 2234455 455555553 33 9999999998755789888 67888885 44554 7777787 899999999997
Q ss_pred cc-cccccCCcCCCC-------C--CCcEEEeCCCCc-CCCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHH
Q 014724 289 IS-GLVAASVVADPF-------K--YCDVVTTTTHKS-LRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTI 357 (419)
Q Consensus 289 ~~-Gl~~~g~~~~~~-------~--~~Div~~S~hK~-l~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~i 357 (419)
.. ++...+....++ + +.+++++|+||+ ++|+|.||+++++ ++.+.+.........+.+ ....
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~GlriG~~~~~~------~l~~~l~~~~~~~~~~~~-~~~q 295 (422)
T 3d6k_A 223 ALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKITHAGSGVSFFASSK------ENIEWYASHANVRGIGPN-KLNQ 295 (422)
T ss_dssp TTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTTSCTTSSCEEEECCH------HHHHHHHHHHHHHCSCCC-HHHH
T ss_pred cccccCCCCCCCcChhhHhhccCCCCcEEEEcChhhhcCcccceEEEEeCH------HHHHHHHHHHHhhcCCCC-HHHH
Confidence 63 343322111112 1 356889999996 4788999999886 666666543222222222 2223
Q ss_pred HHHHHHHHHh--cChHHHHHHHHHHHHHHHHHHHHHh----CC-cEEecCCCcceeEEEEeCC
Q 014724 358 GGLAVCLKHA--QSPEFKVYQNKVVSNCRALASRLVE----LG-YKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 358 aala~al~~~--~~~~~~~~~~~v~~n~~~l~~~L~~----~G-~~v~~~~t~~hlv~vd~~~ 413 (419)
.+...+++.. .....++..+.+.++++++.+.|.+ .| +++.. ....+++|+++..
T Consensus 296 ~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~-p~~g~~~~~~~~~ 357 (422)
T 3d6k_A 296 LAHAQFFGDVAGLKAHMLKHAASLAPKFERVLEILDSRLSEYGVAKWTS-PTGGYFISVDVVP 357 (422)
T ss_dssp HHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEECC-CSBSSCEEEEEST
T ss_pred HHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCceEEeC-CCcceEEEEECCC
Confidence 3333333220 0112344455566677777777754 34 56543 2456779999864
No 168
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.80 E-value=4e-18 Score=173.02 Aligned_cols=186 Identities=19% Similarity=0.231 Sum_probs=136.6
Q ss_pred cCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHc-
Q 014724 110 SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI- 188 (419)
Q Consensus 110 sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~al- 188 (419)
+.+.+++++++++.+.+...+ |+.+ ....+++ +.+++++|.+. .++++||++|+..++.++
T Consensus 37 ~~~~~~~~~~~a~~~~~~~~~--------~~~~-~~~~~l~----~~la~~~g~~~-----~i~~~sGt~a~~~al~~l~ 98 (437)
T 3bb8_A 37 SGKVIGTKELQLMVEASLDGW--------LTTG-RFNDAFE----KKLGEYLGVPY-----VLTTTSGSSANLLALTALT 98 (437)
T ss_dssp CCCCCCHHHHHHHHHHHHHCC--------CBSC-HHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHHHTT
T ss_pred CCCCCCHHHHHHHHHHHHcCC--------cCCC-hHHHHHH----HHHHHHHCCCc-----EEEeCCHHHHHHHHHHHhh
Confidence 344567889999988775321 1222 2334444 67888999873 378899999999999998
Q ss_pred --------cCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcC-
Q 014724 189 --------LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA- 259 (419)
Q Consensus 189 --------l~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~- 259 (419)
+++||+|+++.++|.++.. .+...|. +++.++++++++.+|+++|++.+.+ ++++|++++
T Consensus 99 ~~~~~~~~~~~gd~Vi~~~~~~~~~~~--------~~~~~g~--~~~~v~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~ 167 (437)
T 3bb8_A 99 SPKLGVRALKPGDEVITVAAGFPTTVN--------PTIQNGL--IPVFVDVDIPTYNVNASLIEAAVSD-KTKAIMIAHT 167 (437)
T ss_dssp CGGGGGGSCCTTCEEEECSSSCHHHHH--------HHHHTTC--EEEECCEETTTTEECGGGHHHHCCT-TEEEEEEECG
T ss_pred hcccccccCCCcCEEEECCCCcHHHHH--------HHHHcCC--EEEEEeccCccCCcCHHHHHHhcCC-CCeEEEEeCC
Confidence 8999999999998877642 2234454 5566666644688999999999864 789888863
Q ss_pred CCCCCcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC-CCcEEEeCCC--CcCCCCCeeEEEEeCC
Q 014724 260 SAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTH--KSLRGPRGGMIFFKKD 329 (419)
Q Consensus 260 s~~p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~-~~Div~~S~h--K~l~GprgG~i~~~~~ 329 (419)
++++ .|+++|.++|+++|++||+|++|..|....+. .+. ..|+++.|++ |.++|++||+++++++
T Consensus 168 ~g~~--~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~---~~~~~~d~~~~s~~~~k~l~~g~gg~~~~~~~ 235 (437)
T 3bb8_A 168 LGNL--FDLAEVRRVADKYNLWLIEDCCDALGSTYDGK---MAGTFGDIGTVSFYPAKHITMGEGGAVFTQSA 235 (437)
T ss_dssp GGCC--CCHHHHHHHHHHHTCEEEEECTTCTTCEETTE---ETTSSSSEEEEECSTTSSSCCSSCEEEEESCH
T ss_pred CCCh--hcHHHHHHHHHHcCCEEEEECccccCceECCe---ecccccCEEEEECcCCcCCCCCCeEEEEeCCH
Confidence 4454 78999999999999999999999877654221 121 3788777764 4478889999998863
No 169
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.80 E-value=1.7e-18 Score=169.13 Aligned_cols=259 Identities=16% Similarity=0.123 Sum_probs=172.6
Q ss_pred hcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcC---CCCCCCceeEecCC-
Q 014724 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN---LDENKWGVNVQPLS- 176 (419)
Q Consensus 103 ~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g---~~~~~~~v~V~~~s- 176 (419)
+.|.|..+++. +++.|++++.+.+......+|+.. + ..+++ +.++++++ ++++ +|++++
T Consensus 20 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~----~---~~~lr----~~la~~~~~~~~~~~----~v~~~~G 84 (335)
T 1uu1_A 20 DKTYLALNENPFPFPEDLVDEVFRRLNSDALRIYYDS----P---DEELI----EKILSYLDTDFLSKN----NVSVGNG 84 (335)
T ss_dssp CSEEESSCCCSSCCCHHHHHHHHHTCCGGGGGSCCCS----S---CHHHH----HHHHHHHTCSSCCGG----GEEEESS
T ss_pred cceECCCCCCCCCCCHHHHHHHHHHhhhhhhhcCCCC----c---hHHHH----HHHHHHcCCCCCCHH----HEEEcCC
Confidence 35778777763 589999999887732112234321 1 12444 56777787 6653 355555
Q ss_pred hHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEE
Q 014724 177 GSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLII 256 (419)
Q Consensus 177 Gt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi 256 (419)
|++|+..++.++ ||+|++. |.|.++.. .+...|. +++.++++ +++.+|++++ .++|+|+
T Consensus 85 ~~~al~~~~~~~---gd~Vl~~-p~y~~~~~--------~~~~~g~--~~~~v~~~-~~~~~d~~~l------~~~~~v~ 143 (335)
T 1uu1_A 85 ADEIIYVMMLMF---DRSVFFP-PTYSCYRI--------FAKAVGA--KFLEVPLT-KDLRIPEVNV------GEGDVVF 143 (335)
T ss_dssp HHHHHHHHHHHS---SEEEECS-SSCHHHHH--------HHHHHTC--EEEECCCC-TTSCCCCCCC------CTTEEEE
T ss_pred hHHHHHHHHHHh---CCcEEEC-CCcHHHHH--------HHHHcCC--eEEEeccC-CCCCCCHHHc------CCCCEEE
Confidence 578999999888 9999999 88766531 1233454 55555554 3467888776 3789999
Q ss_pred EcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC--CCcEEEeCCCCcC--CCCCeeEEEEeCCC
Q 014724 257 AGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSL--RGPRGGMIFFKKDP 330 (419)
Q Consensus 257 ~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--~~Div~~S~hK~l--~GprgG~i~~~~~~ 330 (419)
+++|+||+ ..+.+++.++++.+| ++|+|++|. ++...... ..++ +.+++++|+||++ +|.|.|++++++
T Consensus 144 l~~p~nptG~~~~~~~l~~l~~~~~-~li~De~~~-~~~~~~~~-~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~-- 218 (335)
T 1uu1_A 144 IPNPNNPTGHVFEREEIERILKTGA-FVALDEAYY-EFHGESYV-DFLKKYENLAVIRTFSKAFSLAAQRVGYVVASE-- 218 (335)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHTTC-EEEEECTTH-HHHCCCCG-GGGGTCSSEEEEEESTTTTTCGGGCCEEEEECH--
T ss_pred EeCCCCCCCCCCCHHHHHHHHHhCC-EEEEECcch-hhcchhHH-HHhhhCCCEEEEecchhhcCCcccCeEEEEeCH--
Confidence 88889884 678899999999889 999999975 33221111 1112 3568999999997 577889999976
Q ss_pred cchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeEEEE
Q 014724 331 VLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVD 410 (419)
Q Consensus 331 ~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~vd 410 (419)
++.+.+.....++ +++....+++..+++.. +.+++..+++.++++++.+.|++.|+++.++ ..+++|++
T Consensus 219 ----~~~~~l~~~~~~~---~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~--~~~~~~~~ 287 (335)
T 1uu1_A 219 ----KFIDAYNRVRLPF---NVSYVSQMFAKVALDHR--EIFEERTKFIVEERERMKSALREMGYRITDS--RGNFVFVF 287 (335)
T ss_dssp ----HHHHHHHHHSCTT---CSCHHHHHHHHHHHHTH--HHHHHHHHHHHHHHHHHHHHHHHHTCCBCCC--CSSEEEEE
T ss_pred ----HHHHHHHHhcCCC---CcCHHHHHHHHHHhCCH--HHHHHHHHHHHHHHHHHHHHHHHCCcEEcCC--CCeEEEEE
Confidence 6777666543332 33333444444455431 3457788889999999999998888876543 34568888
Q ss_pred eCC
Q 014724 411 LRP 413 (419)
Q Consensus 411 ~~~ 413 (419)
+..
T Consensus 288 ~~~ 290 (335)
T 1uu1_A 288 MEK 290 (335)
T ss_dssp CCT
T ss_pred CCC
Confidence 753
No 170
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.79 E-value=5.4e-18 Score=172.85 Aligned_cols=289 Identities=16% Similarity=0.177 Sum_probs=170.2
Q ss_pred ccccccChh-HHHHHHHHHHHhh-hcccccccC-------CCChHHHHHHHhhhh--hccCCCCCCCCCCCCchhHHHHH
Q 014724 81 YSLGEADPE-VCEIITKEKERQF-KSLELIASE-------NFTSRAVMEAVGSCL--TNKYSEGLPGKRYYGGNEYIDEL 149 (419)
Q Consensus 81 ~~l~~~~~~-~~~~~~~e~~r~~-~~i~L~~se-------n~~~~~V~eal~~~l--~~~y~~g~p~~r~~~g~~~~~~l 149 (419)
..+...++. ++.+.+..+.... ..|+|..+. .++.++|++++.... ......+|+. ..|. .++
T Consensus 26 ~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y~~---~~G~---~~l 99 (448)
T 3meb_A 26 SGFPASPPDAILNLTVLYNADTNPKKVNLGVGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEYPP---VAGF---PLF 99 (448)
T ss_dssp TTCCCCCCCTTHHHHHHHHHCCCTTCEEESSCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSCCC---TTCC---HHH
T ss_pred hcCCCCCCChHHHHHHHHHhCCCCCeEEeecccccCCCCCEechHHHHHHHHHHhhcccCCCCCCCC---Ccch---HHH
Confidence 446666665 6776655444333 347776543 234578888855443 1122223432 1232 244
Q ss_pred HHHHHHHHHHH-cCCC-----CCCCceeEe--cCChHHHHHH--HHHHccCCCCEEEEeCCCCCccccCcccccccccc-
Q 014724 150 ETLCQKRALAA-FNLD-----ENKWGVNVQ--PLSGSPANFE--VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVS- 218 (419)
Q Consensus 150 E~~~~~~la~~-~g~~-----~~~~~v~V~--~~sGt~A~~~--~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~- 218 (419)
.+ .++++ +|.+ ++ + + ++ +.+|++|+.. .+.++++|||+|++++|.|.++.. .+.
T Consensus 100 r~----~ia~~l~g~~~~~~~~~-~-i-~~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~--------~~~~ 164 (448)
T 3meb_A 100 LE----AAQFLMFGKDSKAAQEG-R-I-ASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYG--------IYDK 164 (448)
T ss_dssp HH----HHHHHHHCTTCHHHHTT-C-E-EEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHH--------HHHH
T ss_pred HH----HHHHHhcCCCccccCcC-c-E-EEEECCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHH--------HHHh
Confidence 43 34444 3776 32 2 2 33 5566889876 567788999999999999877642 233
Q ss_pred ---ccccccEEEeccc-CCC-CCCCCHHHHHHHhhh--cCCeEEEEcCCCCCC--cC---ChHHHHHHHHHhCCEEEEec
Q 014724 219 ---GTSIYFESMPYRL-DES-TGLVDYDMLEKTAIL--FRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDM 286 (419)
Q Consensus 219 ---~~g~~~~~v~~~~-~~~-~~~iD~d~Le~~l~~--~~pklIi~~~s~~p~--~~---dl~~I~~ia~~~ga~livD~ 286 (419)
..|..+. .+++ +++ ++.+|+|+|++.+++ .+++++++++++||+ .. ++++|+++|++||+++++|+
T Consensus 165 ~~~~~G~~v~--~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~De 242 (448)
T 3meb_A 165 VFNKLKVPYK--EYTYLRKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDS 242 (448)
T ss_dssp HHCTTTSCCE--EECCBCTTSCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEE
T ss_pred hHHhCCCeEE--EEeccccccCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEec
Confidence 4565444 4444 444 588999999999975 246788889999986 33 36779999999999999999
Q ss_pred cccccccccCCc--CCC---C-C-CCc-EEEeCCCCcC--CCCCeeEE--EE--------eCCCcchhhHHHHhhhcccC
Q 014724 287 AHISGLVAASVV--ADP---F-K-YCD-VVTTTTHKSL--RGPRGGMI--FF--------KKDPVLGVELESAINNAVFP 346 (419)
Q Consensus 287 ah~~Gl~~~g~~--~~~---~-~-~~D-iv~~S~hK~l--~GprgG~i--~~--------~~~~~~~~~l~~~i~~~~~~ 346 (419)
+| .++...+.. ..+ + + +.+ +++.|+||+| +|+|.|++ +. .++. ...++.+.+......
T Consensus 243 ay-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~-~~~~l~~~l~~~~~~ 320 (448)
T 3meb_A 243 AY-QGFATGSFEADAFAVRMFVDAGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKA-LSAAMVSGMTLQIRK 320 (448)
T ss_dssp SC-TTTSSSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHH-HHHHHHHHHHHHHHT
T ss_pred cc-ccccCCCcccCchhHHHHhhcCCcEEEEecccccCCCccccceeeeeeeccccccccCCHH-HHHHHHHHHHHHHhc
Confidence 95 444433210 000 1 1 233 7799999987 57888997 55 3210 000233333332222
Q ss_pred CCCCCChHHHHHHHHHHHHHh-----cChHHHHHHHHHHHHHHHHHHHHHhCCc
Q 014724 347 GLQGGPHNHTIGGLAVCLKHA-----QSPEFKVYQNKVVSNCRALASRLVELGY 395 (419)
Q Consensus 347 ~~~g~p~~~~iaala~al~~~-----~~~~~~~~~~~v~~n~~~l~~~L~~~G~ 395 (419)
... +++.....+.+.++... ...+.++..+++.+++++|.+.|++.|+
T Consensus 321 ~~~-~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~ 373 (448)
T 3meb_A 321 TWS-MSAIHGAYIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKRKT 373 (448)
T ss_dssp TTS-SCCHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ccC-CccHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 222 23223222323233211 0123467778889999999999998753
No 171
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.79 E-value=2.1e-18 Score=173.81 Aligned_cols=298 Identities=13% Similarity=0.045 Sum_probs=178.2
Q ss_pred cccccChhHHHHHHHHHHHhhhcccccccCCC-----ChHHHHHHHh--hhhhccC-CCCCCCCCCCCchhHHHHHHHHH
Q 014724 82 SLGEADPEVCEIITKEKERQFKSLELIASENF-----TSRAVMEAVG--SCLTNKY-SEGLPGKRYYGGNEYIDELETLC 153 (419)
Q Consensus 82 ~l~~~~~~~~~~~~~e~~r~~~~i~L~~sen~-----~~~~V~eal~--~~l~~~y-~~g~p~~r~~~g~~~~~~lE~~~ 153 (419)
.+.++++.++..+.+.+. ....|+|..+..- +++.+++++. +.+.+.. ..+||+. ..|. .+++
T Consensus 6 ~~~~~~~~~~~~~~~~~~-~~~~i~l~~g~p~~~~~~~~~~v~~a~~~~~~~~~~~~~~~Yp~~--~~g~---~~lr--- 76 (423)
T 3ez1_A 6 ASRPALDLARQAYEAFKA-RGLNLNMQRGQPADADFDLSNGLLTVLGAEDVRMDGLDLRNYPGG--VAGL---PSAR--- 76 (423)
T ss_dssp CCHHHHHHHHHHHHHHHH-HTCCEESCCCCCCHHHHHTTGGGGGSCCGGGCEETTEETTSSCSC--TTCC---HHHH---
T ss_pred HHHHHHHHHHHHHHHhhc-CCceEecCCCCCChHhCCCcHHHHHHHhhhHHhhcchhhhCCCCC--CCCh---HHHH---
Confidence 455667777776655433 3466888877633 4567888875 4433111 1234211 1122 2444
Q ss_pred HHHHHHHcCCCCCCCceeEecCCh-HHHHH--HHHHHccC--C---------CCEEEEeCCCCCccccCccccccccccc
Q 014724 154 QKRALAAFNLDENKWGVNVQPLSG-SPANF--EVYTAILK--P---------HDRIMGLDLPHGGHLSHGFMTPKRRVSG 219 (419)
Q Consensus 154 ~~~la~~~g~~~~~~~v~V~~~sG-t~A~~--~~~~all~--p---------GD~Vl~~~~~~~g~~s~~~~~~~~~i~~ 219 (419)
+.++++++++++ +|++++| ++|+. .++.++++ | ||+|++.+|.|.++.. .+..
T Consensus 77 -~~ia~~~~~~~~----~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~--------~~~~ 143 (423)
T 3ez1_A 77 -ALFAGYLDVKAE----NVLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFL--------LLQT 143 (423)
T ss_dssp -HHHHHHTTSCGG----GEEECSSCHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHH--------HHHH
T ss_pred -HHHHHHhCCChh----hEEEeCCcHHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHHHH--------HHHH
Confidence 667788898874 3555555 67887 88888888 8 5999999998866531 2234
Q ss_pred cccccEEEecccCCCCCCCCHHHHHHHhh-hcCCeEEEEc-CCCCCC--cCCh---HHHHHHH-HHhCCEEEEecccccc
Q 014724 220 TSIYFESMPYRLDESTGLVDYDMLEKTAI-LFRPKLIIAG-ASAYPR--DFDY---PRMRQIA-DAVGALLMMDMAHISG 291 (419)
Q Consensus 220 ~g~~~~~v~~~~~~~~~~iD~d~Le~~l~-~~~pklIi~~-~s~~p~--~~dl---~~I~~ia-~~~ga~livD~ah~~G 291 (419)
.|. +++++++++ + .+|+|+|++.++ ..++|+|++. +++||+ ..+. ++|+++| ++||++||+|++|...
T Consensus 144 ~g~--~~~~v~~~~-~-g~d~~~l~~~l~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~ 219 (423)
T 3ez1_A 144 LGF--ELLTVDMQS-D-GPDVDAVERLAGTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVH 219 (423)
T ss_dssp HTC--EEEEEEEET-T-EECHHHHHHHHHSCTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSC
T ss_pred cCC--EEEeccCCC-C-CCCHHHHHHHHhhCCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchh
Confidence 455 455555553 2 499999999995 3478888754 678874 4454 5888888 8999999999997532
Q ss_pred cccc-CCcC--CC--------CCCCcEEEeCCCCc-CCCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHH
Q 014724 292 LVAA-SVVA--DP--------FKYCDVVTTTTHKS-LRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGG 359 (419)
Q Consensus 292 l~~~-g~~~--~~--------~~~~Div~~S~hK~-l~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaa 359 (419)
.... +..+ +. ..+.+++++|+||+ ++|+|.|+++.++ ++.+.+.........+.+... ..+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~~------~~~~~~~~~~~~~~~~~~~~~-~~a 292 (423)
T 3ez1_A 220 HLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSKITFAGAGLGFVASSE------DNIRWLSKYLGAQSIGPNKVE-QAR 292 (423)
T ss_dssp BCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTTTSCSSSSCEEEEECH------HHHHHHHHHHHHSCSCCCHHH-HHH
T ss_pred hcCCCCCCCCcchhhhhhccCCCCeEEEEeCchhhccCCcceEEEEeCH------HHHHHHHHHHhhhccCCCHHH-HHH
Confidence 2221 1111 11 11456889999996 5888999999987 566666543222222222222 233
Q ss_pred HHHHHHHhc---ChHHHHHHHHHHHHHHHHHHHH----HhCC--cEEecCCCcceeEEEEeCC
Q 014724 360 LAVCLKHAQ---SPEFKVYQNKVVSNCRALASRL----VELG--YKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 360 la~al~~~~---~~~~~~~~~~v~~n~~~l~~~L----~~~G--~~v~~~~t~~hlv~vd~~~ 413 (419)
+..++.... ...+++..+.+.++++.+.+.| .+.| +.+.. ....+++|+++..
T Consensus 293 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~-p~~g~~~~~~~~~ 354 (423)
T 3ez1_A 293 HVKFLTEYPGGLEGLMRDHAAIIAPKFRAVDEVLRAELGEGGEYATWTL-PKGGYFISLDTAE 354 (423)
T ss_dssp HHHHHHHSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSEEECC-CSBSSCEEEEESS
T ss_pred HHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCceEEeC-CCccEEEEEECCC
Confidence 333444311 1223333444444555555554 4455 66543 2456678998864
No 172
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.79 E-value=1.8e-18 Score=174.30 Aligned_cols=212 Identities=19% Similarity=0.149 Sum_probs=146.7
Q ss_pred hhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCcccccccccccccc
Q 014724 143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 222 (419)
Q Consensus 143 ~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~ 222 (419)
++...++| +.+++++|.+. .++++||++|+..++. ++++||+|+++++.|+++..... ..+...|.
T Consensus 66 ~p~~~~l~----~~la~~~g~~~-----~i~~~sG~~ai~~~~~-l~~~gd~Vl~~~~~y~~~~~~~~----~~~~~~G~ 131 (403)
T 3cog_A 66 NPTRNCLE----KAVAALDGAKY-----CLAFASGLAATVTITH-LLKAGDQIICMDDVYGGTNRYFR----QVASEFGL 131 (403)
T ss_dssp CHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHH----HTGGGGTC
T ss_pred CchHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHH-HhCCCCEEEEeCCCcchHHHHHH----HHHHHcCC
Confidence 34445555 67788888763 4788999999999998 89999999999999877532100 01123454
Q ss_pred ccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCChHHHHHHHHHhC-CEEEEeccccccccccCCcC
Q 014724 223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVG-ALLMMDMAHISGLVAASVVA 299 (419)
Q Consensus 223 ~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~dl~~I~~ia~~~g-a~livD~ah~~Gl~~~g~~~ 299 (419)
+++.++.+ |++++++.+++ ++++|++++++||+ ..|+++|+++|+++| +++++|++|..+.. .
T Consensus 132 --~v~~v~~~------d~~~l~~~i~~-~t~~v~~~~p~nptG~~~~l~~i~~la~~~g~~~livD~~~~~~~~-----~ 197 (403)
T 3cog_A 132 --KISFVDCS------KIKLLEAAITP-ETKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILVVDNTFMSPYF-----Q 197 (403)
T ss_dssp --EEEEECTT------SHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHTSSSCCEEEEECTTTCTTT-----C
T ss_pred --EEEEECCC------CHHHHHHhcCc-CCeEEEEECCCCCCCeeeCHHHHHHHHHHcCCCEEEEECCCccccc-----C
Confidence 45554432 89999999875 78999999999884 679999999999999 99999999865532 2
Q ss_pred CCCC-CCcEEEeCCCCcCCCCC---eeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHH
Q 014724 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 375 (419)
Q Consensus 300 ~~~~-~~Div~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~ 375 (419)
.+++ ++|++++|+||+|.||. +|+++++++ ++.+.+......+.. .++....++ ++..+. .+..+
T Consensus 198 ~~~~~~~div~~S~sK~~~g~~~~~~G~v~~~~~-----~l~~~l~~~~~~~g~-~~~~~~~~~---~~~~l~--~l~~r 266 (403)
T 3cog_A 198 RPLALGADISMYSATKYMNGHSDVVMGLVSVNCE-----SLHNRLRFLQNSLGA-VPSPIDCYL---CNRGLK--TLHVR 266 (403)
T ss_dssp CTTTTTCSEEEEETTTTTTCSSCCCCEEEEECCH-----HHHHHHHHHHHHHCC-CCCHHHHHH---HHHHHT--THHHH
T ss_pred CccccCCeEEEEcChhhccCCCCCeEEEEEECcH-----HHHHHHHHHHHhcCC-CCCHHHHHH---HHhhhh--HHHHH
Confidence 3444 78999999999998764 699998653 566666543222211 122222211 122221 24455
Q ss_pred HHHHHHHHHHHHHHHHhC
Q 014724 376 QNKVVSNCRALASRLVEL 393 (419)
Q Consensus 376 ~~~v~~n~~~l~~~L~~~ 393 (419)
.+++.+|+..+.+.|+++
T Consensus 267 ~~~~~~n~~~l~~~l~~~ 284 (403)
T 3cog_A 267 MEKHFKNGMAVAQFLESN 284 (403)
T ss_dssp HHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHhcC
Confidence 677788888888888765
No 173
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.79 E-value=5.8e-19 Score=175.88 Aligned_cols=286 Identities=15% Similarity=0.167 Sum_probs=166.7
Q ss_pred hhcccccccC----C---CChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcC--CCCCCCceeE
Q 014724 102 FKSLELIASE----N---FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN--LDENKWGVNV 172 (419)
Q Consensus 102 ~~~i~L~~se----n---~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g--~~~~~~~v~V 172 (419)
.+.|+|..+. + ++++.|++++.+.+.+....+|... .| ..++++.+.+++....+ +++++ + +
T Consensus 26 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~---~g---~~~lr~~la~~~~~~~~~~~~~~~--v-~ 96 (396)
T 2q7w_A 26 PGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGI---DG---IPEFGRCTQELLFGKGSALINDKR--A-R 96 (396)
T ss_dssp --CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCT---TC---CHHHHHHHHHHHHCTTCHHHHTTC--E-E
T ss_pred CCceecccccccCCCCCccCcHHHHHHHHhhcCcccccCCCCC---CC---CHHHHHHHHHHHhcCCCCcccccc--E-E
Confidence 3567887775 2 3569999999877643222234221 12 23555444444322211 12321 2 3
Q ss_pred e--cCChHHHHHHHHHHc--cCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCC-CCCCCCHHHHHHHh
Q 014724 173 Q--PLSGSPANFEVYTAI--LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTA 247 (419)
Q Consensus 173 ~--~~sGt~A~~~~~~al--l~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~-~~~~iD~d~Le~~l 247 (419)
+ +++|++|+..++.++ ++|||+|++++|.|.++.. .+...|. +++.++.++ +++.+|+++|++.+
T Consensus 97 ~~~~~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~--------~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~l 166 (396)
T 2q7w_A 97 TAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKS--------VFNSAGL--EVREYAYYDAENHTLDFDALINSL 166 (396)
T ss_dssp EEEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHHH--------HHHHTTC--EEEEEECEETTTTEECHHHHHHHH
T ss_pred EEecccchhhHHHHHHHHHHhCCCCEEEEcCCCchhHHH--------HHHHcCC--ceEEEecccCCCCCcCHHHHHHHH
Confidence 2 556688999888665 4799999999998877542 2234455 444444431 35789999999998
Q ss_pred hhc--CCeEEEEcCCCCCC--cC---ChHHHHHHHHHhCCEEEEeccccccccccC--CcC--CCCC---CCcEEEeCCC
Q 014724 248 ILF--RPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAAS--VVA--DPFK---YCDVVTTTTH 313 (419)
Q Consensus 248 ~~~--~pklIi~~~s~~p~--~~---dl~~I~~ia~~~ga~livD~ah~~Gl~~~g--~~~--~~~~---~~Div~~S~h 313 (419)
++. +++++++++++||+ .. ++++|+++|++||++||+|++|. ++...+ ... ..+. ..+++++|+|
T Consensus 167 ~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~s~s 245 (396)
T 2q7w_A 167 NEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQ-GFARGLEEDAEGLRAFAAMHKELIVASSYS 245 (396)
T ss_dssp TTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCT-TSSSCHHHHTHHHHHHHHHCSCEEEEEECT
T ss_pred HhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccc-cccCCccchhHHHHHHHhcCCcEEEEEecc
Confidence 753 35678889999985 22 46789999999999999999964 333221 100 0011 2347899999
Q ss_pred CcC--CCCCeeEEEE---eCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHh-----cChHHHHHHHHHHHHH
Q 014724 314 KSL--RGPRGGMIFF---KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHA-----QSPEFKVYQNKVVSNC 383 (419)
Q Consensus 314 K~l--~GprgG~i~~---~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~-----~~~~~~~~~~~v~~n~ 383 (419)
|+| +|.|.|+++. +++. ..++.+.+........ ++++....++...+++.. ..+..++..+++.+++
T Consensus 246 K~~~~~G~riG~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~ 322 (396)
T 2q7w_A 246 XNFGLYNERVGACTLVAADSET--VDRAFSQMKAAIRANY-SNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMR 322 (396)
T ss_dssp TTTTCGGGCCEEEEEECSSHHH--HHHHHHHHHHHHHTTT-SSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHH
T ss_pred ccccccccccceEEEEcCCHHH--HHHHHHHHHHHHhhcc-CCCCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHH
Confidence 998 4778899987 3310 0023333332211222 222333333333334321 0123456677788899
Q ss_pred HHHHHHHHhCC----cEEecCCCcceeEEEEe
Q 014724 384 RALASRLVELG----YKLVSGGSDNHLVLVDL 411 (419)
Q Consensus 384 ~~l~~~L~~~G----~~v~~~~t~~hlv~vd~ 411 (419)
+++.+.|++.| +++..+ ..+.++|+++
T Consensus 323 ~~l~~~L~~~~~~~~~~~~~~-~~~~~~~~~~ 353 (396)
T 2q7w_A 323 QLFVNTLQEKGANRDFSFIIK-QNGMFSFSGL 353 (396)
T ss_dssp HHHHHHHHHTTCCSCCTHHHH-CCSSEEECCC
T ss_pred HHHHHHHHhcCCCCCcceecC-CCceEEEecC
Confidence 99999999987 665532 2234567665
No 174
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.79 E-value=7.8e-18 Score=169.55 Aligned_cols=213 Identities=18% Similarity=0.136 Sum_probs=146.5
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCcccccccc-cccc
Q 014724 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRR-VSGT 220 (419)
Q Consensus 142 g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~-i~~~ 220 (419)
+++...++| +++++++|.+. .++++||++|+.+ +.++++|||+|++.++.|++.+.... .. ....
T Consensus 65 ~~p~~~~l~----~~la~l~g~~~-----~~~~~sG~~Ai~~-~~~l~~~gd~Vi~~~~~y~~~~~~~~----~~~~~~~ 130 (400)
T 3nmy_A 65 HNPTRFAYE----RCVAALEGGTR-----AFAFASGMAATST-VMELLDAGSHVVAMDDLYGGTFRLFE----RVRRRTA 130 (400)
T ss_dssp CCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHH-HHTTSCTTCEEEEESSCCHHHHHHHH----HTHHHHH
T ss_pred CCHHHHHHH----HHHHHHhCCCC-----EEEecCHHHHHHH-HHHHcCCCCEEEEeCCCchHHHHHHH----HhhHhhc
Confidence 456556666 56788888764 3778999999987 57889999999999998876532110 00 1113
Q ss_pred ccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCc
Q 014724 221 SIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV 298 (419)
Q Consensus 221 g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~ 298 (419)
|. ++..++. .|++++++.+++ ++++|++++++||+ ..|+++|+++|++||+++|+|++|..+...
T Consensus 131 g~--~~~~v~~------~d~~~l~~~i~~-~~~~v~~e~~~np~G~~~~l~~i~~la~~~g~~livDe~~~~~~~~---- 197 (400)
T 3nmy_A 131 GL--DFSFVDL------TDPAAFKAAIRA-DTKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTVVDNTFASPMLQ---- 197 (400)
T ss_dssp CC--EEEEECT------TSHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHC----
T ss_pred Ce--EEEEECC------CCHHHHHHHhcc-CCCEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccC----
Confidence 44 4444433 289999999975 78999999988874 679999999999999999999998755432
Q ss_pred CCCCC-CCcEEEeCCCCcCCCC---Cee-EEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHH
Q 014724 299 ADPFK-YCDVVTTTTHKSLRGP---RGG-MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK 373 (419)
Q Consensus 299 ~~~~~-~~Div~~S~hK~l~Gp---rgG-~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~ 373 (419)
.+++ ++|++++|+||+|.|+ .|| +++.+++ ++.+++........ ...+. ..+ ..++..+. .+.
T Consensus 198 -~~~~~g~div~~S~sK~l~g~g~~~gG~~vv~~~~-----~~~~~l~~~~~~~g-~~~~~--~~a-~~~l~~l~--~l~ 265 (400)
T 3nmy_A 198 -RPLSLGADLVVHSATKYLNGHSDMVGGIAVVGDNA-----ELAEQMAFLQNSIG-GVQGP--FDS-FLALRGLK--TLP 265 (400)
T ss_dssp -CGGGGTCSEEEEETTTTTTCSSSCCCEEEEECSCH-----HHHHHHHHHHHHHC-CBCCH--HHH-HHHHHHHT--THH
T ss_pred -ChhhcCCcEEEecCccccCCCCCcceeEEEEeCCH-----HHHHHHHHHHHhcC-CCCCH--HHH-HHHHHhHh--HHH
Confidence 2344 7999999999999876 467 6666553 56655543221111 11111 211 12233332 356
Q ss_pred HHHHHHHHHHHHHHHHHHhC
Q 014724 374 VYQNKVVSNCRALASRLVEL 393 (419)
Q Consensus 374 ~~~~~v~~n~~~l~~~L~~~ 393 (419)
.+.+++.+|++++.+.|++.
T Consensus 266 ~r~~~~~~~a~~l~~~L~~~ 285 (400)
T 3nmy_A 266 LRMRAHCENALALAQWLETH 285 (400)
T ss_dssp HHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHcC
Confidence 67788899999999999885
No 175
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.79 E-value=5.1e-18 Score=177.07 Aligned_cols=285 Identities=13% Similarity=0.091 Sum_probs=173.0
Q ss_pred cccccccC-CCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHc-C-CCCCCCceeEecCCh-HH
Q 014724 104 SLELIASE-NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAF-N-LDENKWGVNVQPLSG-SP 179 (419)
Q Consensus 104 ~i~L~~se-n~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~-g-~~~~~~~v~V~~~sG-t~ 179 (419)
.|+|..++ .+.++.+++++.+.+... +|+.. ..|. .++++.+.+++.+.+ + +..... .+|++++| ++
T Consensus 105 ~i~l~~g~~~~~~~~~v~a~~~~~~~~---~y~~~--~~g~---~~lr~~ia~~l~~~~~~~~~~~~~-~~i~~t~G~t~ 175 (533)
T 3f6t_A 105 AVNYCHTELGLNRDKVVAEWVNGAVAN---NYPVP--DRCL---VNTEKIINYFLQELSYKDANLAEQ-TDLFPTEGGTA 175 (533)
T ss_dssp HHHHHHHTTCCCHHHHHHHHHHHHHTC---SCCSS--SSCC---HHHHHHHHHHHHHHHTTTCCCGGG-EEEEEEEHHHH
T ss_pred heeccCCCCCcCCcHHHHHHHHHHHhC---CCCCC--cccH---HHHHHHHHHHHHHhcCCCCCCCCc-ceEEEECCHHH
Confidence 45565544 335677777776665421 23211 1122 367766777776652 3 332111 23555555 67
Q ss_pred HHHHHHHH-----ccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccC-CCCCCCCHHHHHHHhhhcCCe
Q 014724 180 ANFEVYTA-----ILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD-ESTGLVDYDMLEKTAILFRPK 253 (419)
Q Consensus 180 A~~~~~~a-----ll~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~-~~~~~iD~d~Le~~l~~~~pk 253 (419)
|+..++.+ +++|||+|++.+|+|.++.. .+...|..+..++++.+ .+++.+|+++|++.+.+ ++|
T Consensus 176 al~~~~~~l~~~~l~~~gd~Viv~~p~~~~~~~--------~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~-~~k 246 (533)
T 3f6t_A 176 AIVYAFHSLAENHLLKKGDKIAINEPIFTPYLR--------IPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDP-SIK 246 (533)
T ss_dssp HHHHHHHHHHHTTSSCTTCEEEEESSCCHHHHT--------SGGGGGSEEEEECCCEETTTTSEECHHHHHHHSCT-TEE
T ss_pred HHHHHHHHhhhhhccCCcCEEEEcCCCcHHHHH--------HHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhCC-CCe
Confidence 99999988 89999999999999877642 23345654555554331 24578999999999864 789
Q ss_pred EEEEcCCCCCC--cCC---hHHHHHHHH-HhCCEEEEeccccccccccCCcCCCC---CCCcEEEeCCCCcC--CCCCee
Q 014724 254 LIIAGASAYPR--DFD---YPRMRQIAD-AVGALLMMDMAHISGLVAASVVADPF---KYCDVVTTTTHKSL--RGPRGG 322 (419)
Q Consensus 254 lIi~~~s~~p~--~~d---l~~I~~ia~-~~ga~livD~ah~~Gl~~~g~~~~~~---~~~Div~~S~hK~l--~GprgG 322 (419)
+|++++|+||+ ..+ +++|+++|+ +||++||+|++|. ++.... .+.. .+.+++++|+||+| +|+|.|
T Consensus 247 ~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~-~~~~~~--~~~~~~~~~~~i~~~S~SK~~g~~G~RiG 323 (533)
T 3f6t_A 247 ALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYG-AFVPNF--KSIYSVVPYNTMLVYSYSKLFGCTGWRLG 323 (533)
T ss_dssp EEEEESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTG-GGSTTC--CCHHHHSGGGEEEEEESHHHHTCGGGCEE
T ss_pred EEEEeCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCcc-ccccCc--cCHhhcCCCCEEEEecCcccCCCcccceE
Confidence 99988899985 334 458888888 5899999999974 444321 1111 13459999999987 688999
Q ss_pred EEEEeCCCcchhhHHHHh--------------------------------hhcccCCCCCCChHHHHHHHHH-HHHHh--
Q 014724 323 MIFFKKDPVLGVELESAI--------------------------------NNAVFPGLQGGPHNHTIGGLAV-CLKHA-- 367 (419)
Q Consensus 323 ~i~~~~~~~~~~~l~~~i--------------------------------~~~~~~~~~g~p~~~~iaala~-al~~~-- 367 (419)
+++++++... ..+.+.+ .... ....++++.....+++. ++..+
T Consensus 324 ~l~~~~~~~~-~~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~-~~~~~~~~~~~q~a~a~~a~~~L~~ 401 (533)
T 3f6t_A 324 VIALNEKNVF-DDNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIG-LYHTAGLSTPQQIMEALFSMTHLLT 401 (533)
T ss_dssp EEEEESSCHH-HHHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTT-TGGGCSCCHHHHHHHHHHHHHHHTT
T ss_pred EEEECcHHHH-HHHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHH-HhcccCCChHHHHHHHHHHHHHHhh
Confidence 9999875110 0011111 1111 11112223222222211 22222
Q ss_pred ------cChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCcceeEEEEeCC
Q 014724 368 ------QSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 368 ------~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~vd~~~ 413 (419)
.....++..+++.+++++|.+.|. .|+.+... ....++|+++..
T Consensus 402 ~~g~~~~~~~~~~~~~~~~~r~~~l~~~L~-~~~~~~~~-~~g~~~~~~l~~ 451 (533)
T 3f6t_A 402 STNGGSDDPYIDIARKLVSERYDQLHDAMQ-APKDETDT-NTHYYSLIDIYR 451 (533)
T ss_dssp CBGGGTBCHHHHHHHHHHHHHHHHHHHHHT-CCCCCSTT-BCCSEEEEEHHH
T ss_pred hccccchHHHHHHHHHHHHHHHHHHHHhcC-CCccccCC-CceEEEEEehHh
Confidence 224456777888889999999997 77765432 334568888753
No 176
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.78 E-value=1.6e-18 Score=173.90 Aligned_cols=287 Identities=10% Similarity=-0.028 Sum_probs=164.8
Q ss_pred hhcccccccCCCCh----HHHHHHHhhhhhccC----CCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEe
Q 014724 102 FKSLELIASENFTS----RAVMEAVGSCLTNKY----SEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQ 173 (419)
Q Consensus 102 ~~~i~L~~sen~~~----~~V~eal~~~l~~~y----~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~ 173 (419)
.+.|+|..+..... +.+.+++.+.+.+.. ..+|+. .....++++.+.+++.+.+|...+ . .+|+
T Consensus 31 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~------~~g~~~lr~~ia~~~~~~~g~~~~-~-~~i~ 102 (417)
T 3g7q_A 31 PGAIMLGGGNPAHIPAMQDYFQTLLTDMVESGKAADALCNYDG------PQGKTALLNALAVLLRETLGWDIE-P-QNIA 102 (417)
T ss_dssp -CCEECSCCCCCCCHHHHHHHHHHHHHHHHHTHHHHHHHSTTC------TTSHHHHHHHHHHHHHHHHCCCCC-G-GGEE
T ss_pred CCceEecCcCCCCCChHHHHHHHHHHHHhhCCcccceeeccCC------CCCcHHHHHHHHHHHHHHhCCCCC-c-ccEE
Confidence 45688887765442 456666665543321 013332 122346776666777666665432 1 1344
Q ss_pred cC-ChHHHHHHHHHHccCCCC-----EEEEe-CCCCCccccCccccccccc-cccccccEEEecccCCCCCCCCHHHHHH
Q 014724 174 PL-SGSPANFEVYTAILKPHD-----RIMGL-DLPHGGHLSHGFMTPKRRV-SGTSIYFESMPYRLDESTGLVDYDMLEK 245 (419)
Q Consensus 174 ~~-sGt~A~~~~~~all~pGD-----~Vl~~-~~~~~g~~s~~~~~~~~~i-~~~g~~~~~v~~~~~~~~~~iD~d~Le~ 245 (419)
++ +|++|+..++.+++++|| +|+++ +|.|.++..... .. ...+....+.+++.+..++.+|+++|+
T Consensus 103 ~t~G~t~al~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~- 176 (417)
T 3g7q_A 103 LTNGSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGL-----EDDLFVSARPNIELLPEGQFKYHVDFEHLH- 176 (417)
T ss_dssp EESCHHHHHHHHHHHHSBC----CCBEEEESSCCCHHHHHC----------CCEEECCCEEEEEGGGEEEEECCGGGCC-
T ss_pred EeCCcHHHHHHHHHHHcCCCccCCcceEEEeCCCccccchhhcc-----chhhhccccCcccccCCcccccccCHHHhc-
Confidence 44 557899999999999988 89987 887766532110 00 011222344443332113568999988
Q ss_pred HhhhcCCeEEEEcCCCCCC--cCC---hHHHHHHHHHhCCEEEEeccccccc---cccCCcCCCCCCCcEEEeCCCCcC-
Q 014724 246 TAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGL---VAASVVADPFKYCDVVTTTTHKSL- 316 (419)
Q Consensus 246 ~l~~~~pklIi~~~s~~p~--~~d---l~~I~~ia~~~ga~livD~ah~~Gl---~~~g~~~~~~~~~Div~~S~hK~l- 316 (419)
+. .++++|++++|+||+ ..+ +++|+++|++||++||+|++|.... .+.+..+ ...+.+++++|+||+.
T Consensus 177 -~~-~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~ 253 (417)
T 3g7q_A 177 -IG-EETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGIIFSEARP-LWNPNIILCMSLSKLGL 253 (417)
T ss_dssp -CC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCCC-CCCTTEEEEEESGGGTC
T ss_pred -cc-cCceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCcccccccccccccc-CCCCCEEEEEechhccC
Confidence 44 478999999999985 445 8899999999999999999975321 1111111 0125678899999953
Q ss_pred CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcC-hHHHH-HHHHHHHHHHHHHHHHHh--
Q 014724 317 RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQS-PEFKV-YQNKVVSNCRALASRLVE-- 392 (419)
Q Consensus 317 ~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~-~~~~~-~~~~v~~n~~~l~~~L~~-- 392 (419)
+|.|.|+++.++ ++.+.+.........+++... .+++...+..... ....+ ..+++.++++.+.+.|.+
T Consensus 254 ~G~r~G~~~~~~------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 326 (417)
T 3g7q_A 254 PGSRCGIIIAND------KTITAIANMNGIISLAPGGMG-PAMMCEMIKRNDLLRLSETVIKPFYYQRVQQTIAIIRRYL 326 (417)
T ss_dssp TTSCCEEEECCH------HHHHHHHHHHHHHCCCCCSHH-HHHHHHHHHTTCHHHHHHHTHHHHHHHHHHHHHHHHHHHC
T ss_pred CCcceEEEEeCH------HHHHHHHHhhcceeeCCCcHH-HHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 677889999877 666665543221112222222 2222323332110 01112 344556667777777765
Q ss_pred --CCcEEecCCCcceeEEEEeCC
Q 014724 393 --LGYKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 393 --~G~~v~~~~t~~hlv~vd~~~ 413 (419)
.|+.+... ....++|+++..
T Consensus 327 ~~~~~~~~~~-~~g~~~~~~~~~ 348 (417)
T 3g7q_A 327 SEERCLIHKP-EGAIFLWLWFKD 348 (417)
T ss_dssp CTTTCEEECC-CBSSEEEEECTT
T ss_pred ccCCceeeCC-CcceEEEEEcCC
Confidence 26777642 456778998865
No 177
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.78 E-value=7e-19 Score=179.62 Aligned_cols=232 Identities=14% Similarity=0.148 Sum_probs=146.1
Q ss_pred HHHHHHHHcCCCCCCCceeEecCCh-HHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEeccc
Q 014724 153 CQKRALAAFNLDENKWGVNVQPLSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 231 (419)
Q Consensus 153 ~~~~la~~~g~~~~~~~v~V~~~sG-t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~ 231 (419)
+++++++ +|.+. .+++++| ++|+.+++.++++|||+|+++.+.|.++.. .+...|.....++...
T Consensus 62 ~~~~la~-~g~~~-----~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~~--------~~~~~G~~~~~v~~~~ 127 (446)
T 2x3l_A 62 SMKQVEK-HSDYD-----GYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVLH--------ALDISQQEGHFIETHQ 127 (446)
T ss_dssp HHHHHCS-CTTEE-----EEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHHH--------HHHHHTCCEEECEEEE
T ss_pred HHHHHHh-cCCCc-----eEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHHH--------HHHHcCCeEEEEeCee
Confidence 4578888 99873 2556665 589999999999999999999998876542 2334555433333322
Q ss_pred CCCC---CCCCHHHHHHHhhhcCCeEEEEcCCCC-CCcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCC-CC-CC
Q 014724 232 DEST---GLVDYDMLEKTAILFRPKLIIAGASAY-PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADP-FK-YC 305 (419)
Q Consensus 232 ~~~~---~~iD~d~Le~~l~~~~pklIi~~~s~~-p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~-~~-~~ 305 (419)
+++. +.+|+++| +. .++|+|+++++++ +...|+++|.++|++||++|++|++|...+.+.+. +.. .. ++
T Consensus 128 ~~~~~~~~~~d~~~l---~~-~~~~~v~~~~~n~~G~~~~l~~I~~l~~~~~~~livDea~~~~~~f~~~-~~~~~~~g~ 202 (446)
T 2x3l_A 128 SPLTNHYNKVNLSRL---NN-DGHKLVVLTYPNYYGETFNVEEVIKSLHQLNIPVLIDEAHGAHFGLQGF-PDSTLNYQA 202 (446)
T ss_dssp CTTTSSEEEEEC-----------CCEEEEESSCTTSCCCCHHHHHHHHHHTTCCEEEECTTCTTTTSTTS-CCCGGGGTC
T ss_pred ccccCcCCCCCHHHH---cC-CCceEEEEECCCCCeEecCHHHHHHHHHhcCCeEEEcchhhhhhccCCC-CCChHHcCC
Confidence 4221 46888887 33 4688888777654 46789999999999999999999998653333332 211 12 68
Q ss_pred cEEEeCCCCcCCCC-CeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHH
Q 014724 306 DVVTTTTHKSLRGP-RGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCR 384 (419)
Q Consensus 306 Div~~S~hK~l~Gp-rgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~ 384 (419)
|++++|+||++.|+ ++|+++.+++.+ + ...+.........++++...++++..+++.+...+.+++.++..++++
T Consensus 203 Di~~~S~~K~l~~~~g~g~l~~~~~~i---~-~~~~~~~~~~~~~~s~~~~~~aal~~a~~~l~~~g~~~~~~~~~~l~~ 278 (446)
T 2x3l_A 203 DYVVQSFHKTLPALTMGSVLYIHKNAP---Y-RENIIEYLSYFQTSSPSYLIMASLESAAQFYKTYDSTLFFAKRAQLIE 278 (446)
T ss_dssp SEEEECHHHHSSSCTTCEEEEEETTCT---T-HHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_pred CEEEECCccccccccccEEEEEcCCcC---C-HHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 99999999988776 559999987532 2 122222111112345666666666666655432222335666666666
Q ss_pred HHHHHHHhCCcEEecCCCcceeEEEEeC
Q 014724 385 ALASRLVELGYKLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 385 ~l~~~L~~~G~~v~~~~t~~hlv~vd~~ 412 (419)
++.+. |++++... +...+++++.
T Consensus 279 ~l~~~----g~~~~~~~-~~~~l~i~~~ 301 (446)
T 2x3l_A 279 CLENK----GFEMLQVD-DPLKLLIKYE 301 (446)
T ss_dssp HHHHH----TCEEEECS-STTEEEEECT
T ss_pred HHHHc----CCEECcCC-CCeEEEEEeC
Confidence 66555 88887532 3335888875
No 178
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.78 E-value=5.7e-18 Score=169.56 Aligned_cols=214 Identities=17% Similarity=0.110 Sum_probs=146.9
Q ss_pred hhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCcccccccccccccc
Q 014724 143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 222 (419)
Q Consensus 143 ~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~ 222 (419)
++...++| +++++++|.+. .++++||++|+..++.+++++||+|+++++.|++...... ..+...|.
T Consensus 58 ~~~~~~l~----~~la~~~g~~~-----~i~~~sG~~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~----~~~~~~g~ 124 (389)
T 3acz_A 58 NPTVEQFE----EMVCSIEGAAG-----SAAFGSGMGAISSSTLAFLQKGDHLIAGDTLYGCTVSLFT----HWLPRFGI 124 (389)
T ss_dssp CHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHTTTCCTTCEEEEESSCCHHHHHHHH----HHHHHTTC
T ss_pred ChHHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHH----HHHHHcCC
Confidence 34445555 67888888863 3778899999999999999999999999998877532100 00123454
Q ss_pred ccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcCC
Q 014724 223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD 300 (419)
Q Consensus 223 ~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~ 300 (419)
++..++. .|++++++.+++ ++++|++++++||+ ..|+++|+++|+++|+++++|++|..+.. ..
T Consensus 125 --~~~~v~~------~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~livD~~~~~~~~-----~~ 190 (389)
T 3acz_A 125 --EVDLIDT------SDVEKVKAAWKP-NTKMVYLESPANPTCKVSDIKGIAVVCHERGARLVVDATFTSPCF-----LK 190 (389)
T ss_dssp --EEEEECT------TCHHHHHHTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTT-----CC
T ss_pred --EEEEECC------CCHHHHHHhcCC-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccc-----cC
Confidence 4444432 589999999875 78999999988874 67999999999999999999999865532 12
Q ss_pred CCC-CCcEEEeCCCCcCCCCC---eeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHH
Q 014724 301 PFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQ 376 (419)
Q Consensus 301 ~~~-~~Div~~S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~ 376 (419)
+++ ++|++++|+||++.||. +|+++++++ ++.+++....... .++.+.. .+ ..++..+. .+..+.
T Consensus 191 ~~~~~~di~~~S~sK~~~~~~~~~~G~v~~~~~-----~~~~~l~~~~~~~-g~~~~~~--~~-~~~~~~l~--~l~~r~ 259 (389)
T 3acz_A 191 PLELGADIALHSVSKYINGHGDVIGGVSSAKTA-----EDIATIKFYRKDA-GSLMAPM--DA-FLCARGMK--TLPIRM 259 (389)
T ss_dssp GGGTTCSEEEEETTTTTTCSSCCCCEEEEESSH-----HHHHHHHHHHHHH-CCCCCHH--HH-HHHHHHHT--THHHHH
T ss_pred ccccCCeEEEECChhhccCCCCceeEEEEECcH-----HHHHHHHHHHHhc-CCCCCHH--HH-HHHHcCcc--HHHHHH
Confidence 333 78999999999997663 499998872 3555544322111 1111111 11 11222222 245566
Q ss_pred HHHHHHHHHHHHHHHhCC
Q 014724 377 NKVVSNCRALASRLVELG 394 (419)
Q Consensus 377 ~~v~~n~~~l~~~L~~~G 394 (419)
++..+|++.+.+.|++.+
T Consensus 260 ~~~~~~~~~l~~~l~~~~ 277 (389)
T 3acz_A 260 QIHMENGLKVAKFLEQHE 277 (389)
T ss_dssp HHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHHcCC
Confidence 778889999999998863
No 179
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.78 E-value=6.8e-18 Score=164.31 Aligned_cols=207 Identities=14% Similarity=0.110 Sum_probs=141.8
Q ss_pred HHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCC
Q 014724 154 QKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE 233 (419)
Q Consensus 154 ~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~ 233 (419)
++++++++|.+. .+++++|++|+..++.++++|||+|+++++.|.++..... ......|. ++..++.
T Consensus 4 ~~~la~~~g~~~-----~i~~~sG~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~~~~~~g~--~~~~~~~-- 70 (331)
T 1pff_A 4 EGKIAKLEHAEA-----CAATASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFE----HQLRKFGV--EVDFIDM-- 70 (331)
T ss_dssp HHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHH----THHHHTTC--EEEEECT--
T ss_pred HHHHHHHhCCCe-----EEEeCChHHHHHHHHHHhcCCCCEEEEcCCCcchHHHHHH----HHHHhcCC--EEEEeCC--
Confidence 467888999863 4788999999999999999999999999998877532110 00112344 4444432
Q ss_pred CCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CcCChHHHHHHHHH-hCCEEEEeccccccccccCCcCCCCC-CCcEEE
Q 014724 234 STGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADA-VGALLMMDMAHISGLVAASVVADPFK-YCDVVT 309 (419)
Q Consensus 234 ~~~~iD~d~Le~~l~~~~pklIi~~~s~~p--~~~dl~~I~~ia~~-~ga~livD~ah~~Gl~~~g~~~~~~~-~~Div~ 309 (419)
+|++++++.+++ ++++|++++++|| ...|+++|.++|++ +|+++++|++|..|... .+++ ++|+++
T Consensus 71 ----~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~~~~~~~-----~~~~~~~d~~~ 140 (331)
T 1pff_A 71 ----AVPGNIEKHLKP-NTRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPILT-----NPLDLGVDIVV 140 (331)
T ss_dssp ----TSTTHHHHTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHHC-----CGGGGTCSEEE
T ss_pred ----CCHHHHHHhhcC-CCeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCCcccccC-----ChhhcCCcEEE
Confidence 588999998874 7899999988887 46799999999999 99999999999776542 1223 689999
Q ss_pred eCCCCcCCCC--C-eeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHH
Q 014724 310 TTTHKSLRGP--R-GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRAL 386 (419)
Q Consensus 310 ~S~hK~l~Gp--r-gG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l 386 (419)
+|+||+|.+| | +|+++++++ ++.+.+......+..++++.....++..+++. .....++..++.+.+
T Consensus 141 ~s~~K~~~~~~~r~~G~~~~~~~-----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~~ 210 (331)
T 1pff_A 141 HSATKYINGHTDVVAGLVCSRAD-----IIAKVKSQGIKDITGAIISPHDAWLITRGTLT-----LDMRVKRAAENAQKV 210 (331)
T ss_dssp EETTTTTSSSSSCCCEEEEECHH-----HHHHHHHTCCCCCCCCCCCHHHHHHHHHHHHH-----HHHHHHHHHHHHHHH
T ss_pred EECccccCCCCCceEEEEEeCcH-----HHHHHHHHHHHhhcCCCCCHHHHHHHHcCcch-----HHHHHHHHHHHHHHH
Confidence 9999998765 4 789998863 46666665443301122332222222223332 233445566677777
Q ss_pred HHHHHhC
Q 014724 387 ASRLVEL 393 (419)
Q Consensus 387 ~~~L~~~ 393 (419)
.+.|++.
T Consensus 211 ~~~l~~~ 217 (331)
T 1pff_A 211 AEFLHEH 217 (331)
T ss_dssp HHHHHHC
T ss_pred HHHHHcC
Confidence 7777653
No 180
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.78 E-value=1.3e-18 Score=173.31 Aligned_cols=303 Identities=15% Similarity=0.165 Sum_probs=175.6
Q ss_pred cccccChhH-HHHHHHHHHHh-hhcccccccC----C---CChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHH
Q 014724 82 SLGEADPEV-CEIITKEKERQ-FKSLELIASE----N---FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETL 152 (419)
Q Consensus 82 ~l~~~~~~~-~~~~~~e~~r~-~~~i~L~~se----n---~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~ 152 (419)
++...++.. +.+.+...... ...|+|..+. + ++++.|++++.+.+.+....+|+.. .|. .++++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~---~g~---~~lr~~ 77 (394)
T 2ay1_A 4 NLKPQAPDKILALMGEFRADPRQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGL---SGE---PEFQKA 77 (394)
T ss_dssp GCCCCCCCSHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCS---SCC---HHHHHH
T ss_pred cCccCCCccHHHHHHHHHhCCCccccccccceeeCCCCCccCcHHHHHHHHHhcCCcccCCCCCC---CCc---HHHHHH
Confidence 355566653 44333332221 3567887765 2 3479999999887643222244321 121 255544
Q ss_pred HHHHHHHHcCC--CCCCCceeEe---cCChHHHHHHHHHHcc--CCCCEEEEeCCCCCccccCccccccccccccccccE
Q 014724 153 CQKRALAAFNL--DENKWGVNVQ---PLSGSPANFEVYTAIL--KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFE 225 (419)
Q Consensus 153 ~~~~la~~~g~--~~~~~~v~V~---~~sGt~A~~~~~~all--~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~ 225 (419)
+.+++. +. +++ +|+ +.+|++|+.+++.++. .|||+|++++|.|.++.. .+...|..+.
T Consensus 78 la~~~~---~~~~~~~----~v~~~~~~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~ 142 (394)
T 2ay1_A 78 MGELIL---GDGLKSE----TTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVS--------IMNFMGLPVQ 142 (394)
T ss_dssp HHHHHH---GGGCCGG----GEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHH--------HHHHHTCCEE
T ss_pred HHHHHh---CCCCCcc----cEEEEecCCchhHHHHHHHHHHhcCCCCEEEEcCCCChhHHH--------HHHHcCCceE
Confidence 333332 33 443 244 5566889999987774 499999999998866531 2233455444
Q ss_pred EEecccCC-CCCCCCHHHHHHHhhhc--CCeEEEEcCCCCCC--cC---ChHHHHHHHHHhCCEEEEeccccccccccC-
Q 014724 226 SMPYRLDE-STGLVDYDMLEKTAILF--RPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAAS- 296 (419)
Q Consensus 226 ~v~~~~~~-~~~~iD~d~Le~~l~~~--~pklIi~~~s~~p~--~~---dl~~I~~ia~~~ga~livD~ah~~Gl~~~g- 296 (419)
.++ .++ +++.+|++++++.+++. +++++++++++||+ .. ++++|+++|++||+++|+|++|. ++...+
T Consensus 143 ~~~--~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~-~~~~~~~ 219 (394)
T 2ay1_A 143 TYR--YFDAETRGVDFEGMKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQ-GFGDGLE 219 (394)
T ss_dssp EEE--CEETTTTEECHHHHHHHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCT-TSSSCHH
T ss_pred EEe--cccccCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCcc-ccccCcc
Confidence 444 421 35789999999998753 25677779999885 33 46789999999999999999974 333211
Q ss_pred -Cc-C-CCCC--CC-cEEEeCCCCcC--CCCCeeEEEE---eCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHH
Q 014724 297 -VV-A-DPFK--YC-DVVTTTTHKSL--RGPRGGMIFF---KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLK 365 (419)
Q Consensus 297 -~~-~-~~~~--~~-Div~~S~hK~l--~GprgG~i~~---~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~ 365 (419)
.. + ..+. +. .++++|+||+| +|.|.|++++ +++.. ..+.+.+......... +++....++...+++
T Consensus 220 ~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~--~~l~~~~~~~~~~~~~-~~~~~~~~a~~~~l~ 296 (394)
T 2ay1_A 220 EDAAGTRLIASRIPEVLIAASCSKNFGIYRERTGCLLALCADAATR--ELAQGAMAFLNRQTYS-FPPFHGAKIVSTVLT 296 (394)
T ss_dssp HHHHHHHHHHHHCSSEEEEEECTTTTTCGGGCEEEEEEECSSHHHH--HHHHHHHHHHHHTTTS-SCCCHHHHHHHHHHH
T ss_pred cchHHHHHHhhcCCCEEEEEeccCCCcCcCCccceEEEEeCCHHHH--HHHHHHHHHHHhhhcC-CCChHHHHHHHHHhc
Confidence 00 0 0111 32 37799999998 5778899988 33100 0122323221112222 222223333333443
Q ss_pred Hh-----cChHHHHHHHHHHHHHHHHHHHHHhCC----cEEecCCCcceeEEEEeC
Q 014724 366 HA-----QSPEFKVYQNKVVSNCRALASRLVELG----YKLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 366 ~~-----~~~~~~~~~~~v~~n~~~l~~~L~~~G----~~v~~~~t~~hlv~vd~~ 412 (419)
.. ..+..++..+++.++++++.+.|++.| +++..+ ....++|+++.
T Consensus 297 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~-~~g~~~~~~~~ 351 (394)
T 2ay1_A 297 TPELRADWMAELEAVRSGMLRLREQLAGELRDLSGSDRFGFVAE-HRGMFSRLGAT 351 (394)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTHHHH-CCSSEEECCCC
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeEEcC-CceEEEeeCCC
Confidence 22 112456777888889999999998864 665432 22455777653
No 181
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.77 E-value=5.6e-17 Score=163.47 Aligned_cols=218 Identities=16% Similarity=0.134 Sum_probs=141.9
Q ss_pred HHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccC
Q 014724 153 CQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD 232 (419)
Q Consensus 153 ~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~ 232 (419)
+++++++++|.+. .++++||++|++.++.+++++||+|+++++.|+++..... ..+...|. +++.++
T Consensus 61 l~~~la~~~g~~~-----~~~~~~gt~a~~~al~~l~~~gd~vi~~~~~~~~~~~~~~----~~~~~~g~--~~~~~~-- 127 (412)
T 2cb1_A 61 LEERLKALEGALE-----AVVLASGQAATFAALLALLRPGDEVVAAKGLFGQTIGLFG----QVLSLMGV--TVRYVD-- 127 (412)
T ss_dssp HHHHHHHHHTCSE-----EEEESSHHHHHHHHHHTTCCTTCEEEEETTCCHHHHHHHH----HTTTTTTC--EEEEEC--
T ss_pred HHHHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHH----HHHHHcCC--EEEEEC--
Confidence 3467888898763 3677889999999999999999999999998876432110 00223344 444443
Q ss_pred CCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC-CCcEEE
Q 014724 233 ESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVT 309 (419)
Q Consensus 233 ~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p--~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~-~~Div~ 309 (419)
+|+++|++.+++ ++++|++++++|| ...|+++|+++|++||+++|+|++|..+.. ...++. ++|+++
T Consensus 128 -----~~~~~l~~~i~~-~~~~v~~~~~~n~~G~~~~l~~i~~l~~~~~~~li~D~~~~~~~~----~~~~~~~~~di~~ 197 (412)
T 2cb1_A 128 -----PEPEAVREALSA-KTRAVFVETVANPALLVPDLEALATLAEEAGVALVVDNTFGAAGA----LCRPLAWGAHVVV 197 (412)
T ss_dssp -----SSHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGTTTT----SCCGGGGTCSEEE
T ss_pred -----CCHHHHHHHhcc-CCeEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCCccccc----cCCccccCCeEEE
Confidence 248999999875 7899999888887 467999999999999999999999865511 012233 689999
Q ss_pred eCCCCcCCCCC--eeEEEEeCCCcc------h----------------hhHHHHhhhcccCCCCCCChHHHHHHHHHHHH
Q 014724 310 TTTHKSLRGPR--GGMIFFKKDPVL------G----------------VELESAINNAVFPGLQGGPHNHTIGGLAVCLK 365 (419)
Q Consensus 310 ~S~hK~l~Gpr--gG~i~~~~~~~~------~----------------~~l~~~i~~~~~~~~~g~p~~~~iaala~al~ 365 (419)
+|+||++.||. .|+++..++... + .++.+.++...... .|..... ..+ +.++.
T Consensus 198 ~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~-~g~~~~~-~~a-~~~~~ 274 (412)
T 2cb1_A 198 ESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWEALRARCFPERVRTLGLSL-CGMALSP-FNA-YLLFQ 274 (412)
T ss_dssp EETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HHHHGGGHHHHHHHHHHTTT-TCCCCCH-HHH-HHHHH
T ss_pred ECCcccccCCCCcEEEEEEeccccccccccccccccccccchhhccchHHHHHHHHHHHHHh-cCCCCCh-HHh-HHHHc
Confidence 99999997763 355554442100 0 02333333322111 1111111 111 11222
Q ss_pred HhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEEe
Q 014724 366 HAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLV 398 (419)
Q Consensus 366 ~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~ 398 (419)
.+ +.+..+.++..+++++|.+.|.+. |+.++
T Consensus 275 ~l--~~l~~~~~~~~~~~~~l~~~L~~~~~v~~v 306 (412)
T 2cb1_A 275 GL--ETVALRVARMSETARFLAERLQGHPKVKAL 306 (412)
T ss_dssp HG--GGHHHHHHHHHHHHHHHHHHHHTCTTCSEE
T ss_pred CC--chHHHHHHHHHHHHHHHHHHHHcCCCeeEE
Confidence 22 235566777888999999999885 78744
No 182
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.77 E-value=1.4e-17 Score=168.64 Aligned_cols=294 Identities=15% Similarity=0.158 Sum_probs=177.4
Q ss_pred cccccChh-HHHHHHHHHHHhhhccccccc----C---CCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHH
Q 014724 82 SLGEADPE-VCEIITKEKERQFKSLELIAS----E---NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLC 153 (419)
Q Consensus 82 ~l~~~~~~-~~~~~~~e~~r~~~~i~L~~s----e---n~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~ 153 (419)
.+...+|+ ++.+.+..+......|+|..| + .++.+.|++|....+.+....+|.. ..|.+ ++.+.+
T Consensus 23 ~v~~~p~d~i~~l~~~~~~d~~~kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~~~~Y~p---~~G~p---~lr~ai 96 (420)
T 4h51_A 23 KIQAQAPDVIFDLAKRAAAAKGPKANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNLDYEYLP---ISGYQ---PFIDEA 96 (420)
T ss_dssp TCCCCCCCHHHHHHHHHHHCCSSCEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTCCCCCCC---TTCCH---HHHHHH
T ss_pred CCCCCCCChHHHHHHHHhcCCCCCEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCCCCCCCC---cCChH---HHHHHH
Confidence 36666665 677766654433457899876 2 2456899999877666555555654 23433 565555
Q ss_pred HHHHHHHcCCCCC-CCceeEecCChHHHHHHHHH----HccCCCCEEEEeCCCCCccccCccccccccccccccc-cEEE
Q 014724 154 QKRALAAFNLDEN-KWGVNVQPLSGSPANFEVYT----AILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESM 227 (419)
Q Consensus 154 ~~~la~~~g~~~~-~~~v~V~~~sGt~A~~~~~~----all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~-~~~v 227 (419)
++++ ||-... +....+++.+||.|+..++. ++++|||+|++++|.+..|.. .+...|.. +...
T Consensus 97 a~~~---~g~~~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~--------i~~~aG~~~V~~~ 165 (420)
T 4h51_A 97 VKII---YGNTVELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYG--------VVKAAGWKNICTY 165 (420)
T ss_dssp HHHH---HC---CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHHH--------HHHHTTCCCEEEE
T ss_pred HHHh---cCCCccccccceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHHH--------HHHHcCCeEEEee
Confidence 4433 443321 11123556677877655543 446799999999999877642 23445543 2223
Q ss_pred ecccCCCCCCCCHHHHHHHhhhc--CCeEEEEcCCCCCCc-----CChHHHHHHHHHhCCEEEEeccccccccccCCcCC
Q 014724 228 PYRLDESTGLVDYDMLEKTAILF--RPKLIIAGASAYPRD-----FDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD 300 (419)
Q Consensus 228 ~~~~~~~~~~iD~d~Le~~l~~~--~pklIi~~~s~~p~~-----~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~ 300 (419)
++ .+++++.+|++.+.+.++.. +.++++++.|+||+- .++++|.++|+++++++++|++ |.|+.+.+....
T Consensus 166 ~~-~~~~~~~~d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~-Y~~~~~~~~~~~ 243 (420)
T 4h51_A 166 AY-YDPKTVSLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSA-YQGYASGSLDTD 243 (420)
T ss_dssp EC-EEGGGTEECHHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEES-CTTTTTSCHHHH
T ss_pred cc-ccccccCCCHHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehh-hhhhccCCcccc
Confidence 33 23356789999998887643 446777888999963 3578999999999999999999 567765432111
Q ss_pred CC------C-C-CcEEEeCCCCcC--CCCCeeEEEEeCCCcc-hhhHHHHhhhcccCCCCCCChHHHHHHHHHHHH----
Q 014724 301 PF------K-Y-CDVVTTTTHKSL--RGPRGGMIFFKKDPVL-GVELESAINNAVFPGLQGGPHNHTIGGLAVCLK---- 365 (419)
Q Consensus 301 ~~------~-~-~Div~~S~hK~l--~GprgG~i~~~~~~~~-~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~---- 365 (419)
.+ + + .-+++.|++|+| +|+|.|++....+... ...+...+......... .|..+.....+..+.
T Consensus 244 ~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~r~~~s-~~p~~~a~~~~~~l~d~~l 322 (420)
T 4h51_A 244 AYAARLFARRGIEVLLAQSFSKNMGLYSERAGTLSLLLKDKTKRADVKSVMDSLIREEYT-CPPAHGARLAHLILSNNEL 322 (420)
T ss_dssp THHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSCHHHHHHHHHHHHHHHHTTTS-SCCHHHHHHHHHHHHSHHH
T ss_pred hHHHHhHHhhCceEEEEeccccccccccCceEEEEecccCHHHHHHHHHHHHHhhhcccC-cchHHHHHHHHHHhcCHHH
Confidence 11 1 1 237889999975 7999999988765220 01122222222222222 233332222222221
Q ss_pred -HhcChHHHHHHHHHHHHHHHHHHHHHhCCc
Q 014724 366 -HAQSPEFKVYQNKVVSNCRALASRLVELGY 395 (419)
Q Consensus 366 -~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~ 395 (419)
.....+.+.+.+++.+.++.|.+.|++.|.
T Consensus 323 ~~~~~~~~~~m~~r~~~~R~~l~~~L~~~g~ 353 (420)
T 4h51_A 323 RKEWEAELSAMAERIRTMRRTVYDELLRLQT 353 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 111234567788889999999999998763
No 183
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.77 E-value=1.1e-17 Score=164.19 Aligned_cols=259 Identities=14% Similarity=0.127 Sum_probs=169.5
Q ss_pred hhcccccccCCC--ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCC-hH
Q 014724 102 FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLS-GS 178 (419)
Q Consensus 102 ~~~i~L~~sen~--~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~s-Gt 178 (419)
+..|+|..++++ +++.|++++.+.+.. + .+|+.. .+ .++ ++++++++|++++ +|++++ |+
T Consensus 15 ~~~id~~~~~~~~~~~~~v~~a~~~~~~~-~-~~y~~~---~~----~~l----r~~la~~~~~~~~----~i~~t~g~~ 77 (350)
T 3fkd_A 15 SEIVNFSTTVWTDGDKDHLEKHLVENLNC-I-RHYPEP---DA----GTL----RQMLAKRNSVDNN----AILVTNGPT 77 (350)
T ss_dssp -CCEECSCCSCCCSCCHHHHHHHHHTGGG-G-GSCCCT---TC----HHH----HHHHHHHTTCCGG----GEEEESHHH
T ss_pred ccEEEccCCCCCCCCCHHHHHHHHHhHhH-H-hcCCCC---cH----HHH----HHHHHHHhCcCHH----HEEEcCCHH
Confidence 466888888765 579999999887732 2 245432 11 234 4678889998764 355555 56
Q ss_pred HHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEeccc-CCCCCCCCHHHHHHHhhhcCCeEEEE
Q 014724 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL-DESTGLVDYDMLEKTAILFRPKLIIA 257 (419)
Q Consensus 179 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~-~~~~~~iD~d~Le~~l~~~~pklIi~ 257 (419)
+|+..++.++. ||+|++.+|.|.++.. .+...|. +++.+++ ++ +..+++ .++|+|++
T Consensus 78 ~al~~~~~~l~--gd~Vi~~~p~~~~~~~--------~~~~~g~--~~~~v~~~~~-~~~~~~---------~~~~~v~i 135 (350)
T 3fkd_A 78 AAFYQIAQAFR--GSRSLIAIPSFAEYED--------ACRMYEH--EVCFYPSNED-IGEADF---------SNMDFCWL 135 (350)
T ss_dssp HHHHHHHHHTT--TCEEEEEESCCHHHHH--------HHHHTTC--EEEEEETTSC-GGGSCC---------TTCSEEEE
T ss_pred HHHHHHHHHHC--CCEEEEeCCCcHHHHH--------HHHHcCC--eEEEEecCCc-cccCcc---------CCCCEEEE
Confidence 79999999888 9999999998766531 2334555 4555555 32 233443 37899999
Q ss_pred cCCCCCC--cCChHHHHHHHHHhC-CEEEEeccccccccccCCcC-CCCC--CCcEEEeCCCCcC--CCCCeeEEEEeCC
Q 014724 258 GASAYPR--DFDYPRMRQIADAVG-ALLMMDMAHISGLVAASVVA-DPFK--YCDVVTTTTHKSL--RGPRGGMIFFKKD 329 (419)
Q Consensus 258 ~~s~~p~--~~dl~~I~~ia~~~g-a~livD~ah~~Gl~~~g~~~-~~~~--~~Div~~S~hK~l--~GprgG~i~~~~~ 329 (419)
++|+||+ ..+.+++.++++.++ .+||+|++|. ++...+... ..++ ..+++++|+||++ +|.|.|++++++
T Consensus 136 ~~p~nptG~~~~~~~l~~l~~~~~~~~li~Dea~~-~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~- 213 (350)
T 3fkd_A 136 CNPNNPDGRLLQRTEILRLLNDHPDTTFVLDQSYV-SFTTEEVIRPADIKGRKNLVMVYSFSHAYGIPGLRIGYIVANK- 213 (350)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHCTTSEEEEECTTT-TSCSSCCCCGGGGTTCSSEEEEEESHHHHSCGGGCCEEEECCH-
T ss_pred eCCCCCcCCCCCHHHHHHHHHhCCCCEEEEECchh-hhccCcchhhHHhhcCCCEEEEecCchhccCcchheEeEEeCH-
Confidence 9999884 678899999998876 7999999974 444332211 1112 3458899999987 577899999966
Q ss_pred CcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEEecCCCcceeEE
Q 014724 330 PVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLVL 408 (419)
Q Consensus 330 ~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~~~~t~~hlv~ 408 (419)
++.+.+.....++ +++....+++..+++... ++.+..+++.++++++.+.|++. |+++.+ ...+++|
T Consensus 214 -----~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~~~~~~~ 281 (350)
T 3fkd_A 214 -----DFMKRVAAFSTPW---AVNALAIEAAKFILIHPA--QFTLPIRKWQRNTVDFITALNRLDGVEVHP--SGTTFFL 281 (350)
T ss_dssp -----HHHHHHHTTCCTT---CSCHHHHHHHHHHHHCTT--TTCCCHHHHHHHHHHHHHHHHHSTTEEECC--CSSSEEE
T ss_pred -----HHHHHHHHhCCCC---CCCHHHHHHHHHHHhCHH--HHHHHHHHHHHHHHHHHHHHhcCCCcEECC--CCCcEEE
Confidence 6777776544332 233333334344454321 13223344448889999999987 888765 3456677
Q ss_pred EEeCC
Q 014724 409 VDLRP 413 (419)
Q Consensus 409 vd~~~ 413 (419)
+++..
T Consensus 282 ~~~~~ 286 (350)
T 3fkd_A 282 LRLKK 286 (350)
T ss_dssp EEESS
T ss_pred EECCC
Confidence 87754
No 184
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.77 E-value=2.9e-17 Score=163.63 Aligned_cols=264 Identities=10% Similarity=0.036 Sum_probs=163.2
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCC--
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKP-- 191 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~p-- 191 (419)
.+|.|++++.+.+.. +..++ . .+ ..+...++ ++++++++|.+. .++++||++|+..++.++..+
T Consensus 53 ~~p~v~~a~~~~~~~-~~~~~--~-~~-~~~~~~~l----~~~la~~~g~~~-----v~~~~~gt~a~~~al~~~~~~~~ 118 (392)
T 3ruy_A 53 RHPKIINALIDQANR-VTLTS--R-AF-HSDQLGPW----YEKVAKLTNKEM-----VLPMNTGAEAVETAIKTARRWAY 118 (392)
T ss_dssp TCHHHHHHHHHHHTT-CSCCC--T-TS-EETTHHHH----HHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-ccccc--c-cc-CCHHHHHH----HHHHHHhcCCCE-----EEEeCcHHHHHHHHHHHHHHhhh
Confidence 579999999887743 32221 1 11 22333344 467888888332 366778899999999877654
Q ss_pred --------CCEEEEeCCCCCccccCccccccccccccc---cccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCC
Q 014724 192 --------HDRIMGLDLPHGGHLSHGFMTPKRRVSGTS---IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS 260 (419)
Q Consensus 192 --------GD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g---~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s 260 (419)
+|+|++..+.|.+................+ .......++ ..|+++|+++++ .++++|+++++
T Consensus 119 ~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~~~l~-~~~~~v~~~~~ 191 (392)
T 3ruy_A 119 DVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIP------YGDLEALKAAIT-PNTAAFILEPI 191 (392)
T ss_dssp HTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEEC------TTCHHHHHHHCC-TTEEEEEECSS
T ss_pred hccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeC------cccHHHHHHHhc-cCeEEEEEeCc
Confidence 789999999876543110000000000000 000112221 238999999997 47899999988
Q ss_pred CCCC--cCC----hHHHHHHHHHhCCEEEEeccccccccccCCcC--CCCC-CCcEEEeCCCCcCCC--CCeeEEEEeCC
Q 014724 261 AYPR--DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLRG--PRGGMIFFKKD 329 (419)
Q Consensus 261 ~~p~--~~d----l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~--~~~~-~~Div~~S~hK~l~G--prgG~i~~~~~ 329 (419)
+||+ ..+ +++|+++|++||++||+|++|. |+...+... ...+ ..|++++ +|+++| .|+|++++++
T Consensus 192 ~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~d~~~~--SK~l~gG~~~~G~~~~~~- 267 (392)
T 3ruy_A 192 QGEAGINIPPAGFLKEALEVCKKENVLFVADEIQT-GLGRTGKVFACDWDNVTPDMYIL--GKALGGGVFPISCAAANR- 267 (392)
T ss_dssp BSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTT-TTTTTSSSSGGGGGTCCCSEEEE--CGGGGTTTSCCEEEEECH-
T ss_pred cCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechh-CCCccccchhhhccCCCCCEEEE--chhhhCChhhhEEEEECH-
Confidence 8873 455 9999999999999999999984 543332211 1111 4577755 599976 7999999987
Q ss_pred CcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCc---EEecCCCccee
Q 014724 330 PVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGY---KLVSGGSDNHL 406 (419)
Q Consensus 330 ~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~---~v~~~~t~~hl 406 (419)
++.+.+......... +++...+++...+++.... ++..+++.++++++.+.|++.+. .... ...++
T Consensus 268 -----~~~~~~~~~~~~~~~-~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~--~~g~~ 336 (392)
T 3ruy_A 268 -----DILGVFEPGSHGSTF-GGNPLACAVSIAALEVLEE---EKLTERSLQLGEKLVGQLKEIDNPMITEVR--GKGLF 336 (392)
T ss_dssp -----HHHTTCCTTSSCCSS-TTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHTTCCCTTEEEEE--EETTE
T ss_pred -----HHHhhhccCCcCCCC-CCCHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHhcCCCceEEE--eeeeE
Confidence 666666543332222 2233334444445655431 46678888899999999998753 3222 24556
Q ss_pred EEEEeCC
Q 014724 407 VLVDLRP 413 (419)
Q Consensus 407 v~vd~~~ 413 (419)
++|.+..
T Consensus 337 ~~~~~~~ 343 (392)
T 3ruy_A 337 IGIELNE 343 (392)
T ss_dssp EEEEESS
T ss_pred EEEEEcc
Confidence 7777653
No 185
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.77 E-value=2.1e-17 Score=166.88 Aligned_cols=235 Identities=11% Similarity=-0.024 Sum_probs=147.7
Q ss_pred HHHHHHHcCCCCCCCceeEecCCh-HHHH--HHHHHHccC--C----------CCEEEEeCCCCCccccCcccccccccc
Q 014724 154 QKRALAAFNLDENKWGVNVQPLSG-SPAN--FEVYTAILK--P----------HDRIMGLDLPHGGHLSHGFMTPKRRVS 218 (419)
Q Consensus 154 ~~~la~~~g~~~~~~~v~V~~~sG-t~A~--~~~~~all~--p----------GD~Vl~~~~~~~g~~s~~~~~~~~~i~ 218 (419)
++.++++++++++ +|++++| ++|+ ..++.++++ | ||+|++.+|.|.++.. .+.
T Consensus 84 r~~ia~~~~~~~~----~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~~--------~~~ 151 (427)
T 3ppl_A 84 RQIWADLLGVPVE----QVLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHFS--------ITE 151 (427)
T ss_dssp HHHHHHHHTSCGG----GEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHH--------HHH
T ss_pred HHHHHHHhCCCcc----eEEEeCCcHHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcCCCcHHHHH--------HHH
Confidence 3567777788874 3556665 6788 478888877 6 9999999998876542 233
Q ss_pred ccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEc-CCCCCC--cCChH---HHHHHH-HHhCCEEEEecccccc
Q 014724 219 GTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG-ASAYPR--DFDYP---RMRQIA-DAVGALLMMDMAHISG 291 (419)
Q Consensus 219 ~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~-~s~~p~--~~dl~---~I~~ia-~~~ga~livD~ah~~G 291 (419)
..|. +++++++++ ++ +|+++|++.++..++|+|++. +++||+ ..+.+ +|+++| ++||++||+|++|. +
T Consensus 152 ~~g~--~~~~v~~~~-~g-~d~~~l~~~l~~~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~-~ 226 (427)
T 3ppl_A 152 RFGF--EMISVPMNE-DG-PDMDAVEELVKNPQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYA-V 226 (427)
T ss_dssp HTTC--EEEEEEEET-TE-ECHHHHHHHTTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTT-T
T ss_pred HcCC--EEEEeCCCC-CC-CCHHHHHHHHhcCCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCc-c
Confidence 4555 455555653 33 999999999964578988866 678884 44554 888888 99999999999964 4
Q ss_pred ccccCCcCCC-----------CCCCcEEEeCCCCcC-CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHH
Q 014724 292 LVAASVVADP-----------FKYCDVVTTTTHKSL-RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGG 359 (419)
Q Consensus 292 l~~~g~~~~~-----------~~~~Div~~S~hK~l-~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaa 359 (419)
+.+.+....+ ..+.+++++|+||++ +|+|.|+++.++ ++.+.+.........+.+.... .+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G~r~G~~~~~~------~l~~~~~~~~~~~~~~~~~~~q-~~ 299 (427)
T 3ppl_A 227 HTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKITLAGAGVSFFLTSA------ENRKWYTGHAGIRGIGPNKVNQ-LA 299 (427)
T ss_dssp CBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTTSCTTSSCEEEECCH------HHHHHHHHHHHHHCSCCCHHHH-HH
T ss_pred cccCCCCCCccchhhhhhccCCCCcEEEEechhhccCcCccEEEEEcCH------HHHHHHHHHhhcccCCCCHHHH-HH
Confidence 3333221111 114568899999975 788999999887 5666654432211122222222 22
Q ss_pred HHHHHHH--hcChHHHHHHHHHHHHHHHHHHHHHh----C-CcEEecCCCcceeEEEEeCC
Q 014724 360 LAVCLKH--AQSPEFKVYQNKVVSNCRALASRLVE----L-GYKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 360 la~al~~--~~~~~~~~~~~~v~~n~~~l~~~L~~----~-G~~v~~~~t~~hlv~vd~~~ 413 (419)
++.++.. .....+++..+.+.++++.+.+.|.+ . ++.+.. ....+++|+++..
T Consensus 300 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~-p~~g~~~~~~~~~ 359 (427)
T 3ppl_A 300 HARYFGDAEGVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTV-PAGGYFISLDVVP 359 (427)
T ss_dssp HHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCEECC-CSBSSCEEEECST
T ss_pred HHHHHhChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEeC-CCccEEEEEECCc
Confidence 2223322 01122344455566666666666654 3 466543 2456778999864
No 186
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.77 E-value=5.4e-17 Score=160.40 Aligned_cols=256 Identities=18% Similarity=0.170 Sum_probs=159.4
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHH---cc-
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTA---IL- 189 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~a---ll- 189 (419)
.++.+++++.+.+.. + +.+..+| . .....++ ++++++++|++ + ..+++++|++|+..++.+ +.
T Consensus 45 ~~~~v~~a~~~~~~~-~--~~~~~~y-~-~~~~~~l----~~~la~~~g~~-~---~v~~~~g~t~a~~~~~~~~~~~~~ 111 (375)
T 2eh6_A 45 AYPKLTEALKEQVEK-L--LHVSNLY-E-NPWQEEL----AHKLVKHFWTE-G---KVFFANSGTESVEAAIKLARKYWR 111 (375)
T ss_dssp SCHHHHHHHHHHHHH-C--SCCCTTB-C-CHHHHHH----HHHHHHTSSSC-E---EEEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-c--cccCccc-C-CHHHHHH----HHHHHhhcCCC-C---eEEEeCchHHHHHHHHHHHHHHhc
Confidence 689999999888753 2 1222222 2 2222333 47788889983 2 125566778899988865 35
Q ss_pred --CCC-CEEEEeCCCCCccccCccccccccccccccc-----cE-----EEecccCCCCCCCCHHHHHHHhhhcCCeEEE
Q 014724 190 --KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-----FE-----SMPYRLDESTGLVDYDMLEKTAILFRPKLII 256 (419)
Q Consensus 190 --~pG-D~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~-----~~-----~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi 256 (419)
+|| |+|++.++.+.++.... ....+.. +. ...++ .+|+++|++.+++ ++++|+
T Consensus 112 ~~~~g~~~vl~~~~~y~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~~~l~~-~~~~v~ 177 (375)
T 2eh6_A 112 DKGKNKWKFISFENSFHGRTYGS-------LSATGQPKFHKGFEPLVPGFSYAK------LNDIDSVYKLLDE-ETAGII 177 (375)
T ss_dssp HTTCCCCEEEEEBTCCCCSSHHH-------HHHCBCGGGTTTTCSCCSSEEEEC------TTCHHHHHTTCCT-TEEEEE
T ss_pred cCCCCCCEEEEECCCcCCCchhh-------hhhcCCccccCCCCCCCCCceeCC------CchHHHHHHHhcC-CeEEEE
Confidence 789 99999999865542111 0111110 11 11111 2689999998874 789999
Q ss_pred EcCCCCCC--cCC----hHHHHHHHHHhCCEEEEeccccccccccCCcC--CCCC-CCcEEEeCCCCcC-CCCCeeEEEE
Q 014724 257 AGASAYPR--DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSL-RGPRGGMIFF 326 (419)
Q Consensus 257 ~~~s~~p~--~~d----l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~--~~~~-~~Div~~S~hK~l-~GprgG~i~~ 326 (419)
+++++||+ ..+ +++|.++|++||++||+|++|. |+...+... ..+. ..|++++| |+| +|++.|++++
T Consensus 178 ~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~d~~s~S--K~~~~g~~~G~~~~ 254 (375)
T 2eh6_A 178 IEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQT-GIGRTGEFYAYQHFNLKPDVIALA--KGLGGGVPIGAILA 254 (375)
T ss_dssp ECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSGGGGGTCCCSEEEEC--GGGGTTSCCEEEEE
T ss_pred EeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEecccc-CCCCCCcchhhhhcCCCCCEEEEc--ccccCCCCeEEEEE
Confidence 98877763 346 8999999999999999999986 433222110 1111 37888554 988 4557799998
Q ss_pred eCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCccee
Q 014724 327 KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVSGGSDNHL 406 (419)
Q Consensus 327 ~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~~~t~~hl 406 (419)
++ ++.+.+.........+++.....++ ..+++.. +++.+++.++++++.+.|++.+..... ...++
T Consensus 255 ~~------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~-----~~~~~~~~~~~~~l~~~L~~~~~~~~~--~~g~~ 320 (375)
T 2eh6_A 255 RE------EVAQSFTPGSHGSTFGGNPLACRAG-TVVVDEV-----EKLLPHVREVGNYFKEKLKELGKGKVK--GRGLM 320 (375)
T ss_dssp EH------HHHTTCCTTSCCCSSTTCHHHHHHH-HHHHHHH-----HHHHHHHHHHHHHHHHHHHHTTSSEEE--EETTE
T ss_pred cH------HHHhhhcCCCCCCCCCCCHHHHHHH-HHHHHHH-----HHHHHHHHHHHHHHHHHHHHHhcCCce--EEEEE
Confidence 87 5666665422222233333222222 2344433 256778888899999999988754433 24577
Q ss_pred EEEEeCC
Q 014724 407 VLVDLRP 413 (419)
Q Consensus 407 v~vd~~~ 413 (419)
+|+++..
T Consensus 321 ~~~~~~~ 327 (375)
T 2eh6_A 321 LGLELER 327 (375)
T ss_dssp EEEECSS
T ss_pred EEEEEcC
Confidence 8888753
No 187
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.77 E-value=2.3e-17 Score=164.55 Aligned_cols=207 Identities=19% Similarity=0.140 Sum_probs=142.3
Q ss_pred HHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCC
Q 014724 154 QKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE 233 (419)
Q Consensus 154 ~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~ 233 (419)
++.+++++|.+. .+++++|++|+..++.+++++||+|++.++.|++...... ......|. ++..++.
T Consensus 58 ~~~la~~~~~~~-----~i~~~sGt~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~----~~~~~~g~--~~~~~~~-- 124 (386)
T 1cs1_A 58 QRALAELEGGAG-----AVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFD----SLAKRGCY--RVLFVDQ-- 124 (386)
T ss_dssp HHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHH----HHHTTTSC--EEEEECT--
T ss_pred HHHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEecCCcHhHHHHHH----HHHHhcCC--EEEEeCC--
Confidence 467888888763 3778999999999999999999999999998876431100 00123344 4444433
Q ss_pred CCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC-CCcEEEe
Q 014724 234 STGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTT 310 (419)
Q Consensus 234 ~~~~iD~d~Le~~l~~~~pklIi~~~s~~p--~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~-~~Div~~ 310 (419)
.|++++++.+++ ++++|++++++|| ...|+++|+++|+++|+++|+|++|..+... .+++ +.|++++
T Consensus 125 ----~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~-----~~~~~~~di~~~ 194 (386)
T 1cs1_A 125 ----GDEQALRAALAE-KPKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPALQ-----NPLALGADLVLH 194 (386)
T ss_dssp ----TCHHHHHHHHHT-CCSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTC-----CGGGGTCSEEEE
T ss_pred ----CCHHHHHHhhcc-CCcEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccC-----CccccCceEEEE
Confidence 389999999974 7899999998887 4679999999999999999999998655321 2233 6899999
Q ss_pred CCCCcCCCCC---eeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHH
Q 014724 311 TTHKSLRGPR---GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALA 387 (419)
Q Consensus 311 S~hK~l~Gpr---gG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~ 387 (419)
|+||+|.||. +|+++++++ ++.+.+......+. ++++....++...+++ .+....++..++++.+.
T Consensus 195 s~sK~~~~~~~~~~G~~~~~~~-----~l~~~l~~~~~~~~-~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~l~ 263 (386)
T 1cs1_A 195 SCTKYLNGHSDVVAGVVIAKDP-----DVVTELAWWANNIG-VTGGAFDSYLLLRGLR-----TLVPRMELAQRNAQAIV 263 (386)
T ss_dssp ETTTTTTCSSCCCCEEEEESSH-----HHHHHHHHHHHHHT-CBCCHHHHHHHHHHHT-----THHHHHHHHHHHHHHHH
T ss_pred cCcccccCCCCceeEEEEeCcH-----HHHHHHHHHHHhcC-CCCCHHHHHHHHhccc-----HHHHHHHHHHHHHHHHH
Confidence 9999986654 399998863 46555544322211 1222222111111221 24556677888899999
Q ss_pred HHHHhCC
Q 014724 388 SRLVELG 394 (419)
Q Consensus 388 ~~L~~~G 394 (419)
+.|++++
T Consensus 264 ~~l~~~~ 270 (386)
T 1cs1_A 264 KYLQTQP 270 (386)
T ss_dssp HHHTTCT
T ss_pred HHHhcCC
Confidence 9998763
No 188
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.77 E-value=1.5e-17 Score=169.72 Aligned_cols=264 Identities=18% Similarity=0.235 Sum_probs=157.6
Q ss_pred HHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccC----C
Q 014724 116 RAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK----P 191 (419)
Q Consensus 116 ~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~----p 191 (419)
++|++++.+.+.... .. |.......+++ ++++++++.+. .++++||++|+++++.++++ |
T Consensus 55 ~~v~~a~~~~~~~~~-~~------y~~~~~~~~l~----~~la~~~~~~~-----v~~t~ggt~A~~~al~~~~~~~~~~ 118 (467)
T 1ax4_A 55 NAMSDHQWAAMITGD-EA------YAGSRNYYDLK----DKAKELFNYDY-----IIPAHQGRGAENILFPVLLKYKQKE 118 (467)
T ss_dssp CCEEHHHHHHHHTCC-CC------SSSCHHHHHHH----HHHHHHHCCCE-----EEEESSHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhhcc-cc------cccCccHHHHH----HHHHHHcCCCc-----EEEcCCcHHHHHHHHHHHHHhhccC
Confidence 566666665543211 12 22223334454 67788888743 25666789999999999988 9
Q ss_pred CCE---EEEeCCCCCccccCccccccccccccccccEEEecc--cCC-----CCCCCCHHHHHHHhhhc---CCeEEEEc
Q 014724 192 HDR---IMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR--LDE-----STGLVDYDMLEKTAILF---RPKLIIAG 258 (419)
Q Consensus 192 GD~---Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~--~~~-----~~~~iD~d~Le~~l~~~---~pklIi~~ 258 (419)
||+ |++. ..|.+... ..+...|.....++.+ ++. .++.+|+++|++.+++. ++++|+++
T Consensus 119 Gd~~~~viv~-~~~~~~~~-------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi~~ 190 (467)
T 1ax4_A 119 GKAKNPVFIS-NFHFDTTA-------AHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVST 190 (467)
T ss_dssp TCCSSCEEEE-SSCCHHHH-------HHHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEE
T ss_pred CCccceEEEe-ccccchhh-------HHHhccCCceecccccccccccccCCcccccCHHHHHHHHHhcCCCCeeEEEEe
Confidence 998 8887 33422110 0122334322222211 111 14579999999999753 58899998
Q ss_pred CCCCCC---c---CChHHHHHHHHHhCCEEEEeccccc-ccc--------ccCCcCCCC-----CCCcEEEeCCCCcCCC
Q 014724 259 ASAYPR---D---FDYPRMRQIADAVGALLMMDMAHIS-GLV--------AASVVADPF-----KYCDVVTTTTHKSLRG 318 (419)
Q Consensus 259 ~s~~p~---~---~dl~~I~~ia~~~ga~livD~ah~~-Gl~--------~~g~~~~~~-----~~~Div~~S~hK~l~G 318 (419)
+++||+ . .++++|+++|++||++||+|++|.. |.. ..+.....+ .++|++++|+||+++.
T Consensus 191 ~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~g~ 270 (467)
T 1ax4_A 191 VTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDPLL 270 (467)
T ss_dssp SSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCSEEEEETTSTTCC
T ss_pred ccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCchhhhhhhhccccceEEEeccccCCC
Confidence 888775 2 3578999999999999999998765 221 111100001 2478999999999865
Q ss_pred CCeeEEEEeCCCcchhhHHHHhhhcc--cCC--CCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCC
Q 014724 319 PRGGMIFFKKDPVLGVELESAINNAV--FPG--LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG 394 (419)
Q Consensus 319 prgG~i~~~~~~~~~~~l~~~i~~~~--~~~--~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G 394 (419)
|-||+++.+++. ++.+.+.... +.+ ..++.....+++++.++..... +++.++..++++++.+.|++.|
T Consensus 271 ~~Gg~~~~~d~~----~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~ 343 (467)
T 1ax4_A 271 NIGGLVAIRDNE----EIFTLARQRCVPMEGFVTYGGLAGRDMAAMVQGLEEGTE---EEYLHYRIGQVKYLGDRLREAG 343 (467)
T ss_dssp SSCEEEEESSCH----HHHHHHHHHHHHHTCSTTTTTCCHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHHHHHHHTT
T ss_pred CcceEEEeCCHH----HHHHHHHhhccccccccccCCccchHHHHHHHHHHHhhh---hhHHHHHHHHHHHHHHHHHhCC
Confidence 558888887320 1333322110 011 1223333334444445665443 2234445577888999998888
Q ss_pred cEEecCCCcceeEEEEe
Q 014724 395 YKLVSGGSDNHLVLVDL 411 (419)
Q Consensus 395 ~~v~~~~t~~hlv~vd~ 411 (419)
+++.. ....+.+|+++
T Consensus 344 ~~~~~-~~~~~~~~~~~ 359 (467)
T 1ax4_A 344 IPIQY-PTGGHAVFVDC 359 (467)
T ss_dssp CCBCS-SCCSSEEEEES
T ss_pred CCccc-CCCceEEEEeh
Confidence 87753 34567899983
No 189
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.76 E-value=2.1e-17 Score=164.80 Aligned_cols=276 Identities=13% Similarity=0.065 Sum_probs=166.7
Q ss_pred cccccccC-----CCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChH
Q 014724 104 SLELIASE-----NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS 178 (419)
Q Consensus 104 ~i~L~~se-----n~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt 178 (419)
.|++..++ .+.++.|++++.+.+.. +..+ .. .|. .+... .++++++++++++.+ ..+++++|+
T Consensus 47 ~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~-~~~~--~~-~~~-~~~~~----~l~~~la~~~~~~~~---~v~~~~gg~ 114 (395)
T 1vef_A 47 YIDCVGGYGVANLGHGNPEVVEAVKRQAET-LMAM--PQ-TLP-TPMRG----EFYRTLTAILPPELN---RVFPVNSGT 114 (395)
T ss_dssp EEESSHHHHTCTTCBTCHHHHHHHHHHHHH-CCCC--CT-TSC-CHHHH----HHHHHHHHTSCTTEE---EEEEESSHH
T ss_pred EEEccCccccccCCCCCHHHHHHHHHHHHh-CCCC--cc-ccC-CHHHH----HHHHHHHHhcCCCcC---EEEEcCcHH
Confidence 35554442 24789999999988754 2211 11 222 22223 345788889987553 225556778
Q ss_pred HHHHHHHHHcc--CCCCEEEEeCCCCCccccCccccccccccccccccE---EEecccCCC-CCCCCHHHHHHHhhhcCC
Q 014724 179 PANFEVYTAIL--KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFE---SMPYRLDES-TGLVDYDMLEKTAILFRP 252 (419)
Q Consensus 179 ~A~~~~~~all--~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~---~v~~~~~~~-~~~iD~d~Le~~l~~~~p 252 (419)
+|+..++.++. .+||+|+++++.+.+.... .+...|.... ..++..+.. -...|+++|++.+++ ++
T Consensus 115 ~a~~~al~~~~~~~~~~~vi~~~~~y~~~~~~-------~~~~~g~~~~~~~~~p~~~~~~~~~~~d~~~l~~~i~~-~~ 186 (395)
T 1vef_A 115 EANEAALKFARAHTGRKKFVAAMRGFSGRTMG-------SLSVTWEPKYREPFLPLVEPVEFIPYNDVEALKRAVDE-ET 186 (395)
T ss_dssp HHHHHHHHHHHHHHSCCEEEEETTCCCCSSHH-------HHHTCCCHHHHGGGCSCSSCEEEECTTCHHHHHHHCCT-TE
T ss_pred HHHHHHHHHHHHHhCCCeEEEEcCCcCCCchh-------hhhhcCCcccccccCCCCCCeeEeCCCcHHHHHHHhcc-CE
Confidence 99999988764 6899999998876443211 1122232100 001100000 012589999999874 78
Q ss_pred eEEEEcCCCCC--CcCC----hHHHHHHHHHhCCEEEEeccccccccccCCcCCCC---C-CCcEEEeCCCCcCC-CCCe
Q 014724 253 KLIIAGASAYP--RDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K-YCDVVTTTTHKSLR-GPRG 321 (419)
Q Consensus 253 klIi~~~s~~p--~~~d----l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~---~-~~Div~~S~hK~l~-Gprg 321 (419)
++|+++.++++ ...+ +++|+++|++||++||+|++|. |+...+.. .++ + ..|++ |+||+|. |++.
T Consensus 187 ~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~-~~~~~g~~-~~~~~~~~~~d~~--s~sK~~~~g~~~ 262 (395)
T 1vef_A 187 AAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQT-GMGRTGKR-FAFEHFGIVPDIL--TLAKALGGGVPL 262 (395)
T ss_dssp EEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSS-STHHHHTCCCSEE--EECGGGGTTSSC
T ss_pred EEEEEeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEeccc-CCccCCch-hHhhhcCCCCCEE--EEcccccCCCce
Confidence 99888765554 3456 9999999999999999999986 54322211 111 2 46877 6699984 4678
Q ss_pred eEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCcEEec-C
Q 014724 322 GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGYKLVS-G 400 (419)
Q Consensus 322 G~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~~v~~-~ 400 (419)
|++++++ ++.+.+......... +++....++...+++.... +.+.+++.++++++.+.|++.+.+++. .
T Consensus 263 G~~~~~~------~~~~~l~~~~~~~~~-~~~~~~~~a~~~al~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 332 (395)
T 1vef_A 263 GVAVMRE------EVARSMPKGGHGTTF-GGNPLAMAAGVAAIRYLER---TRLWERAAELGPWFMEKLRAIPSPKIREV 332 (395)
T ss_dssp EEEEEEH------HHHHTSCTTSSCCSS-TTCHHHHHHHHHHHHHHHH---HTTHHHHHHHHHHHHHHHHTSCCTTEEEE
T ss_pred EEEEehH------HHHhhhccCCcCCCc-CCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHhhcCceEEE
Confidence 9999987 666666542121111 2233334444445655431 346778888899999999987653211 0
Q ss_pred CCcceeEEEEeCC
Q 014724 401 GSDNHLVLVDLRP 413 (419)
Q Consensus 401 ~t~~hlv~vd~~~ 413 (419)
....+++|+++..
T Consensus 333 ~~~g~~~~~~~~~ 345 (395)
T 1vef_A 333 RGMGLMVGLELKE 345 (395)
T ss_dssp EEETTEEEEEESS
T ss_pred EEEEEEEEEEEcC
Confidence 1234678888753
No 190
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.76 E-value=2e-17 Score=169.77 Aligned_cols=203 Identities=18% Similarity=0.167 Sum_probs=137.8
Q ss_pred hccccccc-C-C-CChHHHHHHHhhhh---hccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCC
Q 014724 103 KSLELIAS-E-N-FTSRAVMEAVGSCL---TNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLS 176 (419)
Q Consensus 103 ~~i~L~~s-e-n-~~~~~V~eal~~~l---~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~s 176 (419)
+.|.|..+ + + .+++.|.+++.... ......+|. + .|++...+ +++++++++|.+. .+++++
T Consensus 90 ~~i~l~~g~~~~~~~~~~i~~a~~~~~~~~~~~~~~~Y~--~--~g~~~~~~----l~~~la~~~g~~~-----~i~~~s 156 (464)
T 1ibj_A 90 LLVNLDNKFDPFDAMSTPLYQTATFKQPSAIENGPYDYT--R--SGNPTRDA----LESLLAKLDKADR-----AFCFTS 156 (464)
T ss_dssp HHTCCCCSSCTTCCSSCCCCCCSBCCCSSSSCCCSCSBT--T--TCCHHHHH----HHHHHHHHHTCSE-----EEEESS
T ss_pred eEEECCCCCCCCCCCCccHHhhhhhhhhcccccCCcccc--C--CCCHHHHH----HHHHHHHHhCCCe-----EEEECC
Confidence 34666554 2 2 35677777765321 011111222 1 24443333 4578889999763 377889
Q ss_pred hHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEE
Q 014724 177 GSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLII 256 (419)
Q Consensus 177 Gt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi 256 (419)
|++|+.+++. +++|||+|+++++.|+++..... ..+...|. +++.++. .|+++|++.+++ ++|+|+
T Consensus 157 Gt~al~~~l~-~~~~Gd~Vi~~~~~y~~~~~~~~----~~~~~~G~--~v~~v~~------~d~~~l~~~i~~-~tk~v~ 222 (464)
T 1ibj_A 157 GMAALSAVTH-LIKNGEEIVAGDDVYGGSDRLLS----QVVPRSGV--VVKRVNT------TKLDEVAAAIGP-QTKLVW 222 (464)
T ss_dssp HHHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHH----HTSGGGTC--EEEEECT------TSHHHHHHHCCS-SEEEEE
T ss_pred HHHHHHHHHH-HhCCCCEEEEECCCchhHHHHHH----HHHHHcCC--EEEEeCC------CCHHHHHHHhcc-CceEEE
Confidence 9999987775 88999999999998876531000 01223454 4444433 289999999874 789999
Q ss_pred EcCCCCC--CcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC-CCcEEEeCCCCcCCCC---CeeEEEEeCCC
Q 014724 257 AGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDP 330 (419)
Q Consensus 257 ~~~s~~p--~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~-~~Div~~S~hK~l~Gp---rgG~i~~~~~~ 330 (419)
+++++|| ...|+++|+++|++||++||+|++|+.|.. ..+++ ++|++++|+||+|.|| ++|+++++++
T Consensus 223 l~~p~NptG~v~~l~~i~~la~~~gi~livDea~~~g~~-----~~~~~~~~div~~S~sK~~~g~~Gl~~G~l~~~~~- 296 (464)
T 1ibj_A 223 LESPTNPRQQISDIRKISEMAHAQGALVLVDNSIMSPVL-----SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE- 296 (464)
T ss_dssp ECSSCTTTCCCCCHHHHHHHHHTTTCEEEEECTTTCTTT-----CCGGGTTCSEEEEETTTTTTCSSCCCCEEEEECSH-
T ss_pred EeCCCCCCCEeecHHHHHHHHHHcCCEEEEECCCccccc-----CChhhcCCEEEEECCcccccCCCCCcEEEEEEChH-
Confidence 9999987 467999999999999999999999876532 12333 6899999999999765 6699999863
Q ss_pred cchhhHHHHhhh
Q 014724 331 VLGVELESAINN 342 (419)
Q Consensus 331 ~~~~~l~~~i~~ 342 (419)
++.+.+..
T Consensus 297 ----~l~~~l~~ 304 (464)
T 1ibj_A 297 ----KLAKEVYF 304 (464)
T ss_dssp ----HHHHHHHH
T ss_pred ----HHHHHHHH
Confidence 56565543
No 191
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.76 E-value=6.3e-17 Score=163.75 Aligned_cols=156 Identities=21% Similarity=0.183 Sum_probs=116.8
Q ss_pred hHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccc
Q 014724 144 EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY 223 (419)
Q Consensus 144 ~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~ 223 (419)
+...++| +++++++|.+. .++++||++|+..++.+++++||+|++..+.|+++..... ......|.
T Consensus 58 ~~~~~l~----~~la~~~g~~~-----~v~~~sGt~A~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~----~~~~~~g~- 123 (421)
T 2ctz_A 58 PTVDVLE----KRLAALEGGKA-----ALATASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFK----VTLKRLGI- 123 (421)
T ss_dssp HHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHH----THHHHTTC-
T ss_pred hHHHHHH----HHHHHHhCCCc-----eEEecCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHH----HHHHHcCC-
Confidence 4444554 67888998864 3788999999999999999999999999998877542110 00123344
Q ss_pred cEEEec-ccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CcCChHHHHHHHHHhCCEEEEeccc-cccccccCCcC
Q 014724 224 FESMPY-RLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAH-ISGLVAASVVA 299 (419)
Q Consensus 224 ~~~v~~-~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p--~~~dl~~I~~ia~~~ga~livD~ah-~~Gl~~~g~~~ 299 (419)
++..+ +. .|++++++.+++ ++++|++++++|| ...|+++|+++|+++|+++|+|++| ..|...
T Consensus 124 -~~~~~~~~------~d~~~l~~~i~~-~~~~v~~~~~~n~~G~~~~l~~i~~~a~~~g~~livD~~~~~~g~~~----- 190 (421)
T 2ctz_A 124 -EVRFTSRE------ERPEEFLALTDE-KTRAWWVESIGNPALNIPDLEALAQAAREKGVALIVDNTFGMGGYLL----- 190 (421)
T ss_dssp -EEEECCTT------CCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGGGGTSC-----
T ss_pred -EEEEECCC------CCHHHHHHhhcc-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcccccccC-----
Confidence 55554 43 289999999975 7899999988877 4679999999999999999999998 766321
Q ss_pred CCCC-CCcEEEeCCCCcCCCCC---eeEEEE
Q 014724 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFF 326 (419)
Q Consensus 300 ~~~~-~~Div~~S~hK~l~Gpr---gG~i~~ 326 (419)
.++. ++|++++|+||+|.||. ||+++.
T Consensus 191 ~~~~~~~Di~~~s~~K~l~~~g~~~G~~~~~ 221 (421)
T 2ctz_A 191 RPLAWGAALVTHSLTKWVGGHGAVIAGAIVD 221 (421)
T ss_dssp CGGGGTCSEEEEETTTTTTCSSCCCCEEEEE
T ss_pred CccccCCeEEEECCcccccCCCCcEEEEEEe
Confidence 2333 68999999999997653 455554
No 192
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.75 E-value=1.8e-17 Score=166.35 Aligned_cols=205 Identities=13% Similarity=0.099 Sum_probs=140.5
Q ss_pred HHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccC
Q 014724 153 CQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD 232 (419)
Q Consensus 153 ~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~ 232 (419)
+++++++++|.+. .++++||++|++.++. +++|||+|++.++.|++.+.... ..+...|..+.. ++++
T Consensus 60 lr~~la~~~g~~~-----~i~~~sGt~a~~~al~-~~~~gd~Vi~~~~~y~~~~~~~~----~~~~~~G~~v~~--v~~~ 127 (393)
T 1n8p_A 60 LERAVAALENAQY-----GLAFSSGSATTATILQ-SLPQGSHAVSIGDVYGGTHRYFT----KVANAHGVETSF--TNDL 127 (393)
T ss_dssp HHHHHHHHTTCSE-----EEEESCHHHHHHHHHH-TSCSSCEEEEESSCCHHHHHHHH----HTSTTTCSCCEE--ESSH
T ss_pred HHHHHHHHhCCCc-----EEEECChHHHHHHHHH-HcCCCCEEEEeCCCchHHHHHHH----HHHHHcCcEEEE--eCCC
Confidence 3477889999873 4788999999999999 99999999999998875432100 012234554433 3332
Q ss_pred CCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CcCChHHHHHHHHHh----CCEEEEeccccccccccCCcCCCCC-CC
Q 014724 233 ESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAV----GALLMMDMAHISGLVAASVVADPFK-YC 305 (419)
Q Consensus 233 ~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p--~~~dl~~I~~ia~~~----ga~livD~ah~~Gl~~~g~~~~~~~-~~ 305 (419)
| ++|++.+++ ++++|++++++|| ...|+++|.++|+++ |+++|+|++|..+... .+++ ++
T Consensus 128 ------d-~~l~~~i~~-~t~lv~~~~~~nptG~~~~l~~i~~la~~~~~~~~~~livD~a~~~~~~~-----~~~~~~~ 194 (393)
T 1n8p_A 128 ------L-NDLPQLIKE-NTKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFLSPYIS-----NPLNFGA 194 (393)
T ss_dssp ------H-HHHHHHSCS-SEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEEECTTTHHHHC-----CGGGGTC
T ss_pred ------h-HHHHHhccc-CceEEEEECCCCCcceecCHHHHHHHHHHhCCCCCCEEEEeCCccccccC-----CHHHcCC
Confidence 7 899998864 7899999998887 467999999999999 9999999998766431 2333 78
Q ss_pred cEEEeCCCCcCCCC--Ce-eEEEEeCCCcchhhHHHHhhhcccC-CCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHH
Q 014724 306 DVVTTTTHKSLRGP--RG-GMIFFKKDPVLGVELESAINNAVFP-GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVS 381 (419)
Q Consensus 306 Div~~S~hK~l~Gp--rg-G~i~~~~~~~~~~~l~~~i~~~~~~-~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~ 381 (419)
|++++|+||+++++ |. |+++++++ ++.+.+...... +. .+.....++ ++..+ +.+....++..+
T Consensus 195 di~~~S~sK~~g~~G~rigG~~~~~~~-----~~~~~l~~~~~~~g~--~~~~~~~~~---~~~~l--~~~~~~~~~~~~ 262 (393)
T 1n8p_A 195 DIVVHSATKYINGHSDVVLGVLATNNK-----PLYERLQFLQNAIGA--IPSPFDAWL---THRGL--KTLHLRVRQAAL 262 (393)
T ss_dssp SEEEEETTTTTTCSSCCCCEEEEESCH-----HHHHHHHHHHHHHCC--CCCHHHHHH---HHHHH--TTHHHHHHHHHH
T ss_pred eEEEEECcccccCCCCceeEEEEeCCH-----HHHHHHHHHHHhcCC--CCCHHHHHH---HHhcc--chHHHHHHHHHH
Confidence 99999999988543 33 99988643 566655433211 11 111111111 12222 124556677888
Q ss_pred HHHHHHHHHHhCC
Q 014724 382 NCRALASRLVELG 394 (419)
Q Consensus 382 n~~~l~~~L~~~G 394 (419)
|++.+.+.|++.+
T Consensus 263 ~~~~l~~~L~~~~ 275 (393)
T 1n8p_A 263 SANKIAEFLAADK 275 (393)
T ss_dssp HHHHHHHHHTSCT
T ss_pred HHHHHHHHHHhCC
Confidence 8999999998864
No 193
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.75 E-value=1.6e-17 Score=166.16 Aligned_cols=270 Identities=10% Similarity=-0.030 Sum_probs=167.5
Q ss_pred hhcccccccCCCChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEe-cCChHHH
Q 014724 102 FKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQ-PLSGSPA 180 (419)
Q Consensus 102 ~~~i~L~~sen~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~-~~sGt~A 180 (419)
...+++.+++..+|+.|++++.+.. +.. .++. .+ +..+ .++.+.+++++++++|++..+. + ++ +++|++|
T Consensus 39 ~~~~~~~~~~~~~~~~v~~a~~~~~-~~~-~~~~--~~--~~~~-~~~~~~~~~~la~~~g~~~~~~-i-~~~t~g~t~a 109 (398)
T 2fyf_A 39 PRDGRFGSGPSKVRLEQLQTLTTTA-AAL-FGTS--HR--QAPV-KNLVGRVRSGLAELFSLPDGYE-V-ILGNGGATAF 109 (398)
T ss_dssp CSSCBCCSSSCCCCHHHHHGGGTTT-TTT-TTSC--TT--SHHH-HHHHHHHHHHHHHHTTCCTTCE-E-EEEETCHHHH
T ss_pred cCCccccCCCCCCCHHHHHHHhhcC-CCc-cCcC--cC--CHHH-HHHHHHHHHHHHHHhCCCCCce-E-EEeCCchhHH
Confidence 3567888888889999999997631 010 0100 01 1222 2334457789999999974211 2 33 5667889
Q ss_pred HHHHHHHccCCC-CEEEEeCCCCCccccCcccccccccccc--ccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEE
Q 014724 181 NFEVYTAILKPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGT--SIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIA 257 (419)
Q Consensus 181 ~~~~~~all~pG-D~Vl~~~~~~~g~~s~~~~~~~~~i~~~--g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~ 257 (419)
+.+++.++++|| |.| ....|+.... ...... |..+..++ ++ ++..+|. .+. .++|+|++
T Consensus 110 l~~~~~~l~~~gv~~v--~~~~~~~~~~-------~~~~~~~~g~~~~~v~--~~-~g~~~~~-----~i~-~~~~~v~~ 171 (398)
T 2fyf_A 110 WDAAAFGLIDKRSLHL--TYGEFSAKFA-------SAVSKNPFVGEPIIIT--SD-PGSAPEP-----QTD-PSVDVIAW 171 (398)
T ss_dssp HHHHHHHTCSSCEEEE--ECSHHHHHHH-------HHHHHCTTSCCCEEEE--CC-TTCCCCC-----CCC-TTCSEEEE
T ss_pred HHHHHHHhcCCCeEEE--eCCHHHHHHH-------HHHHHhCCCCceEEEe--cC-CCCCCCc-----ccc-CCCCEEEE
Confidence 999999999998 443 2222211000 011122 44444444 33 2233332 133 47899998
Q ss_pred cCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCCCCcEEEeCCCCcCCCC-CeeEEEEeCCCcchh
Q 014724 258 GASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGP-RGGMIFFKKDPVLGV 334 (419)
Q Consensus 258 ~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~~~Div~~S~hK~l~Gp-rgG~i~~~~~~~~~~ 334 (419)
++++||+ ..|+++|.++ +|++|++|++|..|.. +.+++.+|++++|+||+++++ +.|+++.++
T Consensus 172 ~~~~nptG~~~~~~~i~~~---~~~~vivD~a~~~~~~-----~~~~~~~di~~~s~sK~~~~~gg~g~l~~~~------ 237 (398)
T 2fyf_A 172 AHNETSTGVAVAVRRPEGS---DDALVVIDATSGAGGL-----PVDIAETDAYYFAPQKNFASDGGLWLAIMSP------ 237 (398)
T ss_dssp ESEETTTTEECCCCCCTTC---C-CEEEEECTTTTTTS-----CCCGGGCSEEEECTTSTTCSCSSEEEEEECH------
T ss_pred eCcCCCcceecchHHhhhh---cCCeEEEEeccccCCc-----ccCcccCcEEEEecCcccCCCCceEEEEECH------
Confidence 8887774 5678887777 8999999999865532 112235799999999998665 458888887
Q ss_pred hHHHHhhhc---------cc-----------CCCCCCChHHHHHHHHHHHHHhcChH-HHHHHHHHHHHHHHHHHHHHhC
Q 014724 335 ELESAINNA---------VF-----------PGLQGGPHNHTIGGLAVCLKHAQSPE-FKVYQNKVVSNCRALASRLVEL 393 (419)
Q Consensus 335 ~l~~~i~~~---------~~-----------~~~~g~p~~~~iaala~al~~~~~~~-~~~~~~~v~~n~~~l~~~L~~~ 393 (419)
++.+.+... .+ ....++++...++++..+++.+...+ +++..+++.++++++.+.|++.
T Consensus 238 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~ 317 (398)
T 2fyf_A 238 AALSRIEAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQER 317 (398)
T ss_dssp HHHHHHHHHHHTTCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHhhcccccCCCCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHc
Confidence 455544210 00 11224556666666666777654333 6788899999999999999997
Q ss_pred -CcEEec-CC-Ccce-eEEEEeC
Q 014724 394 -GYKLVS-GG-SDNH-LVLVDLR 412 (419)
Q Consensus 394 -G~~v~~-~~-t~~h-lv~vd~~ 412 (419)
|+++.. +. ...+ ++++++.
T Consensus 318 ~g~~~~~~~~~~~~~~~~~~~~~ 340 (398)
T 2fyf_A 318 PYTTPFVTDPGLRSQVVGTIDFV 340 (398)
T ss_dssp TTEEESCCSGGGBCSSEEEEEEC
T ss_pred CCceeccCChhhcCCcEEEEECC
Confidence 888873 11 1234 8888874
No 194
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.75 E-value=9.8e-18 Score=171.04 Aligned_cols=265 Identities=17% Similarity=0.191 Sum_probs=156.2
Q ss_pred HHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCC----
Q 014724 116 RAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKP---- 191 (419)
Q Consensus 116 ~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~p---- 191 (419)
++|++++.+.+... .. .|+......+++ +++++++|.+. .++++||++|++.++.+++++
T Consensus 53 ~~v~~a~~~~l~~~-~~------~y~~~~~~~~l~----~~la~~~~~~~-----v~~t~~gt~A~~~al~~~~~~~~~~ 116 (467)
T 2oqx_A 53 GAVTQSMQAAMMRG-DE------AYSGSRSYYALA----ESVKNIFGYQY-----TIPTHQGRGAEQIYIPVLIKKREQE 116 (467)
T ss_dssp SCCCHHHHHHTTSC-CC------CSSSCHHHHHHH----HHHHHHHCCSE-----EEEEC--CCSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccC-cc------eeccCchhHHHH----HHHHHHhCcCc-----EEEcCCcHHHHHHHHHHHhcccccc
Confidence 77788877766321 11 132233344554 67788888743 256677889999999999888
Q ss_pred -C----CEEEEeCCCCCccccCccccccccccccccccEE----EecccC---CCCCCCCHHHHHHHhhh---cCCeEEE
Q 014724 192 -H----DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFES----MPYRLD---ESTGLVDYDMLEKTAIL---FRPKLII 256 (419)
Q Consensus 192 -G----D~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~----v~~~~~---~~~~~iD~d~Le~~l~~---~~pklIi 256 (419)
| |+|++. ..|+..... .....+..... .+++.+ +.++.+|+++|++.+++ .++++|+
T Consensus 117 ~G~~~~d~Ii~~-~~h~~t~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~~~~~~~vi 188 (467)
T 2oqx_A 117 KGLDRSKMVAFS-NYFFDTTQG-------HSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIV 188 (467)
T ss_dssp HCCCTTTCEEEE-SSCCHHHHH-------HHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEE
T ss_pred CCCCccceEEec-ccccccchh-------hhhccCcceeeccccccccCCCCCCccCCcCHHHHHHHHHhcCCCceeEEE
Confidence 9 997765 444221000 00011111000 011111 13467999999999975 3689999
Q ss_pred EcCCCCCC---c---CChHHHHHHHHHhCCEEEEeccccc-ccc--------ccCCcCCCC-----CCCcEEEeCCCCcC
Q 014724 257 AGASAYPR---D---FDYPRMRQIADAVGALLMMDMAHIS-GLV--------AASVVADPF-----KYCDVVTTTTHKSL 316 (419)
Q Consensus 257 ~~~s~~p~---~---~dl~~I~~ia~~~ga~livD~ah~~-Gl~--------~~g~~~~~~-----~~~Div~~S~hK~l 316 (419)
+++++|++ . .++++|+++|++||++||+|++|.. +.. ..+.....+ .++|++++|+||++
T Consensus 189 ~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~s~sK~~ 268 (467)
T 2oqx_A 189 ATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDA 268 (467)
T ss_dssp EESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCSEEEEESSSTT
T ss_pred EeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHHHhhhhhccCCeEEEeccccc
Confidence 98888763 2 3578999999999999999988866 331 222110011 24788899999999
Q ss_pred CCCCeeEEEEeCC-CcchhhHHHHhhhcc--cCCC-C-CCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHH
Q 014724 317 RGPRGGMIFFKKD-PVLGVELESAINNAV--FPGL-Q-GGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLV 391 (419)
Q Consensus 317 ~GprgG~i~~~~~-~~~~~~l~~~i~~~~--~~~~-~-g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~ 391 (419)
+.|.||+++++++ .+ +...++.... ..+. + ++.....++++..++..... +...++..++++++.+.|+
T Consensus 269 g~~~Gg~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~l~~~~~---~~~~~~~~~~~~~l~~~L~ 342 (467)
T 2oqx_A 269 MVPMGGLLCMKDDSFF---DVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMN---LDWLAYRIAQVQYLVDGLE 342 (467)
T ss_dssp CCSSCEEEEECSGGGH---HHHHHHHHHHHHTTSSCCCCCCCHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHHHHHH
T ss_pred CCCCceEEEecChhHH---HHHHHHHHhhhccCCcccccchhhhHHHHHHHhhHhhhh---HHHHHHHHHHHHHHHHHHH
Confidence 7676888888763 11 1223332211 1111 1 22222233334333333322 2334556678899999998
Q ss_pred hCCcEEecCCCcceeEEEEeC
Q 014724 392 ELGYKLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 392 ~~G~~v~~~~t~~hlv~vd~~ 412 (419)
+.|+++.+ ...+++|+++.
T Consensus 343 ~~~~~~~~--~~~~~~~~~~~ 361 (467)
T 2oqx_A 343 EIGVVCQQ--AGGHAAFVDAG 361 (467)
T ss_dssp HTTCCEEE--ECSSCEEEEHH
T ss_pred HCCCeeec--CCceEEEEech
Confidence 88887762 34678999884
No 195
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.75 E-value=6.3e-17 Score=169.28 Aligned_cols=205 Identities=14% Similarity=0.105 Sum_probs=133.1
Q ss_pred cccccccCC-CChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCC--CCCCCceeEecCCh-HH
Q 014724 104 SLELIASEN-FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPLSG-SP 179 (419)
Q Consensus 104 ~i~L~~sen-~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~--~~~~~~v~V~~~sG-t~ 179 (419)
.|+|..++. +.++.+++++.+.+.. .+|+... ++.+ ..++.++.++.+.++. +.... .+|++++| ++
T Consensus 106 ~i~l~~g~~~~~~~~~~~al~~~~~~---~~Y~~~~--g~~~---lr~~ia~~~~~~~~~~~~~~~~~-~~I~~t~G~~e 176 (546)
T 2zy4_A 106 SLSYVRDQLGLDPAAFLHEMVDGILG---CNYPVPP--RMLN---ISEKIVRQYIIREMGADAIPSES-VNLFAVEGGTA 176 (546)
T ss_dssp HHHHHHHTSCCCHHHHHHHHHHHHHT---CSCCSSS--SCCH---HHHHHHHHHHHHHTTCTTSCGGG-EEEEEEEHHHH
T ss_pred hhecccCCCCCCChHHHHHHHHhhhc---CCCCCCc--CCHH---HHHHHHHHHHHHhccCCCCCCCc-ceEEEECCHHH
Confidence 456655553 4567788887776531 2454321 1112 2333444555555543 11001 24666776 56
Q ss_pred HHHHHHHH-----ccCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCC-CCCCCHHHHHHHhhhcCCe
Q 014724 180 ANFEVYTA-----ILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPK 253 (419)
Q Consensus 180 A~~~~~~a-----ll~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~-~~~iD~d~Le~~l~~~~pk 253 (419)
|+..++.+ +++|||+|++++|.|.++.. .+...+.+.++++++.+++ ++.+|+++|++.+. .++|
T Consensus 177 al~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~~~~--------~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~-~~~k 247 (546)
T 2zy4_A 177 AMAYIFESLKLNGLLKAGDKVAIGMPVFTPYIE--------IPELAQYALEEVAINADPSLNWQYPDSELDKLKD-PAIK 247 (546)
T ss_dssp HHHHHHHHHHHTTSSCTTCEEEEEESCCHHHHH--------HHHSTTSCCEEEEEECBGGGTTBCCHHHHGGGGS-TTEE
T ss_pred HHHHHHHHhhhhhcCCCCCEEEEeCCCCccHHH--------HHHHcCCCcEEEEEecCcccCCCCCHHHHHHhhC-CCCe
Confidence 88888877 58999999999998876542 1122333345666655543 46799999998764 4789
Q ss_pred EEEEcCCCCCC--cC---ChHHHHHHH--HHhCCEEEEeccccccccccCCcCCCCC---CCcEEEeCCCCcC--CCCCe
Q 014724 254 LIIAGASAYPR--DF---DYPRMRQIA--DAVGALLMMDMAHISGLVAASVVADPFK---YCDVVTTTTHKSL--RGPRG 321 (419)
Q Consensus 254 lIi~~~s~~p~--~~---dl~~I~~ia--~~~ga~livD~ah~~Gl~~~g~~~~~~~---~~Div~~S~hK~l--~Gprg 321 (419)
+|++++|+||+ .. ++++|.++| +++|++||+|++|. ++... ..+.+. +.+++++|+||++ +|+|.
T Consensus 248 ~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~-~~~~~--~~s~~~~~~~~~i~~~S~SK~~g~~GlRi 324 (546)
T 2zy4_A 248 IFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYG-TFADD--FQSLFAICPENTLLVYSFSKYFGATGWRL 324 (546)
T ss_dssp EEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTG-GGSTT--CCCHHHHCGGGEEEEEESTTTTTCGGGCE
T ss_pred EEEEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcch-hhccc--CcCHHHhCCCCEEEEEeCccccCCCCcce
Confidence 99988999985 33 467788998 77999999999964 43321 111111 3568899999987 68899
Q ss_pred eEEEEeCC
Q 014724 322 GMIFFKKD 329 (419)
Q Consensus 322 G~i~~~~~ 329 (419)
|+++++++
T Consensus 325 G~~~~~~~ 332 (546)
T 2zy4_A 325 GVVAAHQQ 332 (546)
T ss_dssp EEEEEESS
T ss_pred EEEEECCH
Confidence 99999874
No 196
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.74 E-value=5.3e-17 Score=165.19 Aligned_cols=271 Identities=14% Similarity=0.074 Sum_probs=164.6
Q ss_pred hcccccccCCC-----ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCCh
Q 014724 103 KSLELIASENF-----TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG 177 (419)
Q Consensus 103 ~~i~L~~sen~-----~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sG 177 (419)
..|++.++.+. .+|.|++|+.+.+.. +.. .... + ..+...+++ +++++++|.+. .++++||
T Consensus 77 ~ylD~~sg~~~~~lgh~~p~v~~Ai~~~~~~-~~~--~~~~-~-~~~~~~~l~----~~la~~~g~~~-----v~~~~sG 142 (439)
T 2oat_A 77 KYFDFLSSYSAVNQGHCHPKIVNALKSQVDK-LTL--TSRA-F-YNNVLGEYE----EYITKLFNYHK-----VLPMNTG 142 (439)
T ss_dssp EEEESSGGGGTTTTCBTCHHHHHHHHHHHTT-CSC--CCTT-S-EESSHHHHH----HHHHHHHTCSE-----EEEESSH
T ss_pred EEEEccCCcccccCCCCCHHHHHHHHHHHHh-cCc--ccCc-c-CCHHHHHHH----HHHHHhcCCCE-----EEEeCCH
Confidence 34677665432 579999999988754 221 1111 2 122233444 66777787432 2667788
Q ss_pred HHHHHHHHHHcc---------CCC-CEEEEeCCCCCccccCcccccccccccccc----------ccEEEecccCCCCCC
Q 014724 178 SPANFEVYTAIL---------KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI----------YFESMPYRLDESTGL 237 (419)
Q Consensus 178 t~A~~~~~~all---------~pG-D~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~----------~~~~v~~~~~~~~~~ 237 (419)
++|+..++.++. +|| |+|++.++.+.+.... .+...+. ...+..++.
T Consensus 143 seA~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~-------~~~~~g~~~~~~~~~p~~~~v~~~~~------ 209 (439)
T 2oat_A 143 VEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLS-------AISSSTDPTSYDGFGPFMPGFDIIPY------ 209 (439)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHH-------HHTTCCCHHHHTTSCSCCTTEEEECS------
T ss_pred HHHHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHh-------HhhcCCChhcccCCCCCCCCeEEeCC------
Confidence 999999988764 467 8999998876543211 1112220 012222222
Q ss_pred CCHHHHHHHhhhcCCeEEEEcCCCC--CCcC----ChHHHHHHHHHhCCEEEEeccccccccccCCcC--CCCC-CCcEE
Q 014724 238 VDYDMLEKTAILFRPKLIIAGASAY--PRDF----DYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVV 308 (419)
Q Consensus 238 iD~d~Le~~l~~~~pklIi~~~s~~--p~~~----dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~--~~~~-~~Div 308 (419)
.|+++|++.++..++++|+++..++ +... ++++|+++|++||++||+|++| .|+...|... ..+. ..|++
T Consensus 210 ~d~~~le~~l~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~-~g~g~~g~~~~~~~~~~~~Di~ 288 (439)
T 2oat_A 210 NDLPALERALQDPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQ-TGLARTGRWLAVDYENVRPDIV 288 (439)
T ss_dssp SCHHHHHHHTTSTTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTT-TTTTTTSSSSGGGGGTCCCSEE
T ss_pred CCHHHHHHHhCCCCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccc-cCCccCCcchhHHHhCCCCcEE
Confidence 4899999999534678888765432 2223 7999999999999999999998 5654333210 1112 46876
Q ss_pred EeCCCCcCC-C-CCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHH
Q 014724 309 TTTTHKSLR-G-PRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRAL 386 (419)
Q Consensus 309 ~~S~hK~l~-G-prgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l 386 (419)
|++|+|+ | .++|++++++ ++.+.+.......+.+++ ....++...+++.+.+ +.+.+++.+++++|
T Consensus 289 --t~sK~l~~G~~~~G~v~~~~------~~~~~l~~~~~~~t~~~~-~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l 356 (439)
T 2oat_A 289 --LLGKALSGGLYPVSAVLCDD------DIMLTIKPGEHGSTYGGN-PLGCRVAIAALEVLEE---ENLAENADKLGIIL 356 (439)
T ss_dssp --EECGGGGTTSSCCEEEEECH------HHHTTSCTTSSCCSSTTC-HHHHHHHHHHHHHHHH---TTHHHHHHHHHHHH
T ss_pred --EecccccCCCCCeEEEEECH------HHHhccCCCCcccCCCcC-HHHHHHHHHHHHHHhh---hhHHHHHHHHHHHH
Confidence 6789985 4 5899999987 666665442222223332 2233333345655432 24577888889999
Q ss_pred HHHHHhCCcEEec-CCCcceeEEEEeCC
Q 014724 387 ASRLVELGYKLVS-GGSDNHLVLVDLRP 413 (419)
Q Consensus 387 ~~~L~~~G~~v~~-~~t~~hlv~vd~~~ 413 (419)
.+.|++.+++++. ......++++++..
T Consensus 357 ~~~L~~l~~~~~~~~~~~g~~~~v~l~~ 384 (439)
T 2oat_A 357 RNELMKLPSDVVTAVRGKGLLNAIVIKE 384 (439)
T ss_dssp HHHHTTSCTTTEEEEEEETTEEEEEECC
T ss_pred HHHHHHhcCCCcEEEEeeeeEEEEEEec
Confidence 9999887664321 01244678888754
No 197
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.74 E-value=4.7e-17 Score=162.57 Aligned_cols=258 Identities=17% Similarity=0.103 Sum_probs=161.8
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccC---
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--- 190 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~--- 190 (419)
.+|.|++++.+.+..... ++ . .+ ..+...+ +++++++++|.+. .+++++|++|+..++.+++.
T Consensus 56 ~~p~v~~a~~~~~~~~~~--~~-~-~~-~~~~~~~----l~~~la~~~~~~~-----v~~~~gg~~a~~~al~~~~~~~~ 121 (406)
T 4adb_A 56 AHPELREALNEQASKFWH--TG-N-GY-TNEPVLR----LAKKLIDATFADR-----VFFCNSGAEANEAALKLARKFAH 121 (406)
T ss_dssp TCHHHHHHHHHHHTTCSC--CC-T-TS-CCHHHHH----HHHHHHHHSSCSE-----EEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhccc--cc-C-Cc-CCHHHHH----HHHHHHhhCCCCe-----EEEeCcHHHHHHHHHHHHHHHHH
Confidence 479999999888754221 11 1 12 2232333 4478888988663 26677889999999988865
Q ss_pred ----CC-CEEEEeCCCCCccccCccccccccccccccc----------cEEEecccCCCCCCCCHHHHHHHhhhcCCeEE
Q 014724 191 ----PH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY----------FESMPYRLDESTGLVDYDMLEKTAILFRPKLI 255 (419)
Q Consensus 191 ----pG-D~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~----------~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklI 255 (419)
+| |+|++.++.+.+..... ....+.. .+...++ ..|+++|++.++ .++++|
T Consensus 122 ~~~~~g~~~vi~~~~~y~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~~~l~-~~~~~v 187 (406)
T 4adb_A 122 DRYGSHKSGIVAFKNAFHGRTLFT-------VSAGGQPAYSQDFAPLPADIRHAA------YNDINSASALID-DSTCAV 187 (406)
T ss_dssp HHTCTTCCEEEEETTCCCCSSHHH-------HHHSSCGGGTGGGCSCCSSEEEEC------TTCHHHHHTTCS-TTEEEE
T ss_pred hcCCCCCcEEEEECCCcCCCcHHH-------hhccCCccccccCCCCCCCceEeC------CCcHHHHHHHhc-CCeEEE
Confidence 66 99999999876653111 0111100 0111111 258999999987 478999
Q ss_pred EEcCCCCCCc-------CChHHHHHHHHHhCCEEEEeccccccccccCCcC--CCCC-CCcEEEeCCCCcC-CCCCeeEE
Q 014724 256 IAGASAYPRD-------FDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSL-RGPRGGMI 324 (419)
Q Consensus 256 i~~~s~~p~~-------~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~--~~~~-~~Div~~S~hK~l-~GprgG~i 324 (419)
+++ |+||+. .++++|.++|++||++||+|++|. |+...+... ..++ ..|+++ +||+| +|.|+|++
T Consensus 188 ~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~d~~t--~sK~~~~G~r~G~~ 263 (406)
T 4adb_A 188 IVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQT-GVGRTGELYAYMHYGVTPDLLT--TAKALGGGFPVGAL 263 (406)
T ss_dssp EEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSHHHHHTCCCSEEE--ECGGGGTTSCCEEE
T ss_pred EEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCccchhHHHHhcCCCCCEEE--echhhcCCCCeEEE
Confidence 998 777742 368999999999999999999985 554333211 0111 457774 59998 56689999
Q ss_pred EEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCc--EEecC-C
Q 014724 325 FFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELGY--KLVSG-G 401 (419)
Q Consensus 325 ~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G~--~v~~~-~ 401 (419)
+.++ ++.+.+.........+. +....++...+++.+.. +++.+++.++++++.+.|++.+. .+... .
T Consensus 264 ~~~~------~~~~~~~~~~~~~~~~~-~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 333 (406)
T 4adb_A 264 LATE------ECARVMTVGTHGTTYGG-NPLASAVAGKVLELINT---PEMLNGVKQRHDWFVERLNTINHRYGLFSEVR 333 (406)
T ss_dssp EECH------HHHHTCCTTSSCCSSTT-CHHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE
T ss_pred EEcH------HHHhhhccCCcCCCCCC-CHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCCceEEE
Confidence 9887 67777665433333322 33334444446665532 56678888889999999887532 11110 1
Q ss_pred CcceeEEEEeCC
Q 014724 402 SDNHLVLVDLRP 413 (419)
Q Consensus 402 t~~hlv~vd~~~ 413 (419)
...+++++++..
T Consensus 334 ~~g~~~~~~~~~ 345 (406)
T 4adb_A 334 GLGLLIGCVLNA 345 (406)
T ss_dssp EETTEEEEEECT
T ss_pred EEEEEEEEEEeC
Confidence 234567777654
No 198
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.73 E-value=7.1e-16 Score=155.74 Aligned_cols=274 Identities=15% Similarity=0.023 Sum_probs=160.6
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHcc---C
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---K 190 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all---~ 190 (419)
.+|.|++|+.+.+.... .++..+| . .+...+ .+++++++++.+.+ + .+++++|++|++.++.++. +
T Consensus 60 ~~p~v~~a~~~~~~~~~--~~~~~~~-~-~~~~~~----l~~~la~~~~~~~~-~--v~~~~ggtea~~~ai~~~~~~~~ 128 (429)
T 1s0a_A 60 NHPQLNAAMKSQIDAMS--HVMFGGI-T-HAPAIE----LCRKLVAMTPQPLE-C--VFLADSGSVAVEVAMKMALQYWQ 128 (429)
T ss_dssp SCHHHHHHHHHHHHHCS--CCCCSSE-E-CHHHHH----HHHHHHHHSCTTCC-E--EEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcc--ccccccc-C-CHHHHH----HHHHHHHhCCCCCC-E--EEEeCCHHHHHHHHHHHHHHHhc
Confidence 58999999998875432 1211111 1 121222 34578889987653 1 2555667899999887653 2
Q ss_pred ----CCCEEEEeCCCCCccccCcccc-c-----cccccccccccEEEecccC---CCCCCCCHHHHHHHhhh--cCCeEE
Q 014724 191 ----PHDRIMGLDLPHGGHLSHGFMT-P-----KRRVSGTSIYFESMPYRLD---ESTGLVDYDMLEKTAIL--FRPKLI 255 (419)
Q Consensus 191 ----pGD~Vl~~~~~~~g~~s~~~~~-~-----~~~i~~~g~~~~~v~~~~~---~~~~~iD~d~Le~~l~~--~~pklI 255 (419)
|||+|++.++.+.+........ . +.........+..++++.. ...+.+|+++|++.+++ .++++|
T Consensus 129 ~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v 208 (429)
T 1s0a_A 129 AKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRHEIAAV 208 (429)
T ss_dssp HHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHHHTTTEEEE
T ss_pred ccCCCCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHHHHHHHHHHhCCCCEEEE
Confidence 6999999998765432100000 0 0000000012344554321 01235899999999874 356677
Q ss_pred EEcCC-CCCC--cCC----hHHHHHHHHHhCCEEEEeccccccccccCCc-C-CCCC-CCcEEEeCCCCcCCC--CCeeE
Q 014724 256 IAGAS-AYPR--DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLRG--PRGGM 323 (419)
Q Consensus 256 i~~~s-~~p~--~~d----l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~-~-~~~~-~~Div~~S~hK~l~G--prgG~ 323 (419)
+++.. ++++ ..+ +++|+++|++||++||+|++|. |+...+.. . ..++ ..|+++ ++|+|+| .+.|+
T Consensus 209 i~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~-~~g~~g~~~~~~~~~~~~d~~t--~sK~l~~G~~~iG~ 285 (429)
T 1s0a_A 209 IIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIAT-GFGRTGKLFACEHAEIAPDILC--LGKALTGGTMTLSA 285 (429)
T ss_dssp EECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSGGGGGTCCCSEEE--ECGGGGTSSSCCEE
T ss_pred EEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhh-CCcccchHHHhhhcCCCCCEEE--ecccccCCCccceE
Confidence 77765 5543 344 8999999999999999999984 43222211 0 1112 467764 6699865 68899
Q ss_pred EEEeCCCcchhhHHHHhhhcc-----cCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC----C
Q 014724 324 IFFKKDPVLGVELESAINNAV-----FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL----G 394 (419)
Q Consensus 324 i~~~~~~~~~~~l~~~i~~~~-----~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~----G 394 (419)
+++++ ++.+.+.... ..+.. +++...+++...+++.+.++ .+.+++.+++++|.+.|++. +
T Consensus 286 ~~~~~------~~~~~l~~~~~~~~~~~~t~-~~n~~~~~a~~aal~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~ 355 (429)
T 1s0a_A 286 TLTTR------EVAETISNGEAGCFMHGPTF-MGNPLACAAANASLAILESG---DWQQQVADIEVQLREQLAPARDAEM 355 (429)
T ss_dssp EEECH------HHHHHHHTSTTSSCSCCCTT-TTCHHHHHHHHHHHHHHHTC---HHHHHHHHHHHHHHHHHGGGGGCTT
T ss_pred EEeCH------HHHHHhhcCCCcccccCCCC-CCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99887 5666665421 11112 22333444445567665432 45677778899999999874 3
Q ss_pred cEEecCCCcceeEEEEeCC
Q 014724 395 YKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 395 ~~v~~~~t~~hlv~vd~~~ 413 (419)
+..+. ....++|+++..
T Consensus 356 ~~~~~--~~g~~~~~~~~~ 372 (429)
T 1s0a_A 356 VADVR--VLGAIGVVETTH 372 (429)
T ss_dssp EEEEE--EETTEEEEEESS
T ss_pred EEEEE--EeeEEEEEEECC
Confidence 43232 133578888753
No 199
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.73 E-value=6.4e-17 Score=164.29 Aligned_cols=236 Identities=13% Similarity=0.054 Sum_probs=147.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCceeEecCCh-HHHHHHHHHHc-cCCCCEEEEeCCCCCccccCcccccccccccccccc
Q 014724 147 DELETLCQKRALAAFNLDENKWGVNVQPLSG-SPANFEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYF 224 (419)
Q Consensus 147 ~~lE~~~~~~la~~~g~~~~~~~v~V~~~sG-t~A~~~~~~al-l~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~ 224 (419)
.++.+.+++++++++|++.+ ++.+++| +.++++++.++ +++||+|+++++.|.++..... ......|.
T Consensus 107 ~~~~~~~~~~la~~~g~~~~----~i~~~~g~taa~ea~~~a~~~~~gd~Viv~~~~h~s~~~~~~----~~a~~~G~-- 176 (438)
T 1wyu_A 107 LQATFEYQTMIAELAGLEIA----NASMYDGATALAEGVLLALRETGRMGVLVSQGVHPEYRAVLR----AYLEAVGA-- 176 (438)
T ss_dssp HHHHHHHHHHHHHHHTSSEE----CSCBSSHHHHHHHHHHHHHHHHTCCEEEEETTSCHHHHHHHH----HHHHHTTC--
T ss_pred HHHHHHHHHHHHHHhCCCcc----ceEEeCcHHHHHHHHHHHHhcCCCCEEEEcCccCHhHHHHHH----HHHHHCCC--
Confidence 34555678999999999863 3445554 53445444443 6899999999998866532110 00122455
Q ss_pred EEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC--CcCChHHHHHHHHHhCCEEEEecc-ccccccccCCcCCC
Q 014724 225 ESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMA-HISGLVAASVVADP 301 (419)
Q Consensus 225 ~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p--~~~dl~~I~~ia~~~ga~livD~a-h~~Gl~~~g~~~~~ 301 (419)
+++.++. +++.+|+++ +. .++++|++++| |+ ...|+++|.++|+++|+++++|.. +..|.. ..+
T Consensus 177 ~v~~v~~--~~~~~d~~~----i~-~~t~~v~i~~p-n~tG~~~~l~~i~~la~~~g~~vivd~d~~a~g~~-----~~~ 243 (438)
T 1wyu_A 177 KLLTLPL--EGGRTPLPE----VG-EEVGAVVVQNP-NFLGALEDLGPFAEAAHGAGALFVAVADPLSLGVL-----KPP 243 (438)
T ss_dssp EEEEECC--BTTBCCCCC----CC-TTEEEEEEESS-CTTSBCCCHHHHHHHHHHTTCEEEEECCTTGGGTB-----CCH
T ss_pred EEEEEcC--cCCccCHHH----hC-CCeEEEEEECC-CCCeEEecHHHHHHHHHHcCCEEEEEechhhccCc-----CCC
Confidence 4444444 356788776 44 37899998888 55 467999999999999999997754 444432 111
Q ss_pred CC-CCcEEEeCCCC-----cCCCCCeeEEEEeCCCcchhhHHHHhhhcc--------------c---------CCCCCCC
Q 014724 302 FK-YCDVVTTTTHK-----SLRGPRGGMIFFKKDPVLGVELESAINNAV--------------F---------PGLQGGP 352 (419)
Q Consensus 302 ~~-~~Div~~S~hK-----~l~GprgG~i~~~~~~~~~~~l~~~i~~~~--------------~---------~~~~g~p 352 (419)
-. ++|++++|.|| ++.||++|+++++++ +.+.+.... + ....+++
T Consensus 244 ~~~g~D~~~~s~kk~~~~~~~~Gp~~G~l~~~~~------~~~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~~~t~ 317 (438)
T 1wyu_A 244 GAYGADIAVGDGQSLGLPMGFGGPHFGFLATKKA------FVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKAKS 317 (438)
T ss_dssp HHHTCSEEEEECTTTTCCCGGGCSCCEEEEECGG------GGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGSSC
T ss_pred ccCCCCEEEECCcccCCCccCCCCCeeEEEEcHH------HHHhCCCceeccccccCCCcceeeeccccccccchhcccC
Confidence 11 68999999777 678998899999873 333221000 0 0001222
Q ss_pred hH---HHHHHHHHH--HHHhcChHHHHHHHHHHHHHHHHHHHHHhC-CcEEecCCCcceeEEEEe
Q 014724 353 HN---HTIGGLAVC--LKHAQSPEFKVYQNKVVSNCRALASRLVEL-GYKLVSGGSDNHLVLVDL 411 (419)
Q Consensus 353 ~~---~~iaala~a--l~~~~~~~~~~~~~~v~~n~~~l~~~L~~~-G~~v~~~~t~~hlv~vd~ 411 (419)
+. ..++++..+ +..+..+++++..+++.++++++.+.|++. |+++.....--+.+.+++
T Consensus 318 ~~~~~~~~~a~~aa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~ 382 (438)
T 1wyu_A 318 NITTNAQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLEVPGVRPFTPKPFFNEFALAL 382 (438)
T ss_dssp CCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCEECSCSSBCSEEEEEC
T ss_pred CccchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCeEECCCCCeEEEEEEeC
Confidence 22 234444333 444443457788899999999999999997 999875322223344443
No 200
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.73 E-value=2.4e-16 Score=160.05 Aligned_cols=270 Identities=13% Similarity=0.083 Sum_probs=157.3
Q ss_pred cccccccC---C--CChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChH
Q 014724 104 SLELIASE---N--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS 178 (419)
Q Consensus 104 ~i~L~~se---n--~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt 178 (419)
.|++.++. + ..+|.|++|+.+.+.. +. +... .+ ..+...+ .++++++++|.+. .++++||+
T Consensus 67 ylD~~~g~~~~~lgh~~p~v~~ai~~~~~~-~~--~~~~-~~-~~~~~~~----l~~~la~~~g~~~-----v~~~~sGs 132 (433)
T 1z7d_A 67 YYDFLSAYSSVNQGHCHPNILNAMINQAKN-LT--ICSR-AF-FSVPLGI----CERYLTNLLGYDK-----VLMMNTGA 132 (433)
T ss_dssp EEESSHHHHTTTTCBTCHHHHHHHHHHHTT-CS--CCCT-TS-EEHHHHH----HHHHHHHHHTCSE-----EEEESSHH
T ss_pred EEEcccchhhcccCCCCHHHHHHHHHHHHh-CC--CccC-Cc-CCHHHHH----HHHHHHhhcCCCe-----EEEeCCHH
Confidence 45665532 2 2579999999988754 22 1111 12 2232233 3467778887532 26677889
Q ss_pred HHHHHHHHHcc---------CCC-CEEEEeCCCCCccccCccccccccccccccc----------cEEEecccCCCCCCC
Q 014724 179 PANFEVYTAIL---------KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY----------FESMPYRLDESTGLV 238 (419)
Q Consensus 179 ~A~~~~~~all---------~pG-D~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~----------~~~v~~~~~~~~~~i 238 (419)
+|++.++.++. +|| |+|++.++.+.+..... +...+.. ..+..++ ..
T Consensus 133 eA~~~al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~-------~~~~g~~~~~~~~~p~~~~v~~~~------~~ 199 (433)
T 1z7d_A 133 EANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGC-------ISASTTKKCTSNFGPFAPQFSKVP------YD 199 (433)
T ss_dssp HHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC---------------------------------CEEEEC------TT
T ss_pred HHHHHHHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhh-------hcccCCccccccCCCCCCCeEEeC------CC
Confidence 99999987753 578 99999998765542111 1122210 1122222 14
Q ss_pred CHHHHHHHhhhcCCeEEEEcCCCC--CCc----CChHHHHHHHHHhCCEEEEeccccccccccCCcC--CCCC-CCcEEE
Q 014724 239 DYDMLEKTAILFRPKLIIAGASAY--PRD----FDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVT 309 (419)
Q Consensus 239 D~d~Le~~l~~~~pklIi~~~s~~--p~~----~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~--~~~~-~~Div~ 309 (419)
|+++|+++++..++++|+++..++ +.. .++++|+++|++||++||+|++|. |+...+... ..++ ..|++
T Consensus 200 d~~~le~~l~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~g~~g~~~~~~~~~~~~di~- 277 (433)
T 1z7d_A 200 DLEALEEELKDPNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQT-GLGRTGKLLCVHHYNVKPDVI- 277 (433)
T ss_dssp CHHHHHHHHTSTTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSGGGGGTCCCSEE-
T ss_pred CHHHHHHHhCCCCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCcc-CCCcCCcchhhHhcCCCCCEE-
Confidence 899999999534678888875432 222 278999999999999999999984 653323210 1112 46876
Q ss_pred eCCCCcCC-C-CCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHH
Q 014724 310 TTTHKSLR-G-PRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALA 387 (419)
Q Consensus 310 ~S~hK~l~-G-prgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~ 387 (419)
|++|+|+ | .++|++++++ ++.+.+.......+.+++ ....++...+++.+.+ +.+.+++.++++++.
T Consensus 278 -t~sK~l~~G~~~~G~v~~~~------~~~~~l~~~~~~~t~~~~-~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~ 346 (433)
T 1z7d_A 278 -LLGKALSGGHYPISAVLAND------DIMLVIKPGEHGSTYGGN-PLAASICVEALNVLIN---EKLCENAEKLGGPFL 346 (433)
T ss_dssp -EECGGGGTTSSCCEEEEECH------HHHTTCCTTCCCCTTTTC-HHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHH
T ss_pred -EECccccCCCCCeEEEEECH------HHHhhhccccccccCCCC-HHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHH
Confidence 6779984 5 5899999987 666665442222222222 2233333345655432 245677888889999
Q ss_pred HHHHhC--CcEEec-CCCcceeEEEEeCC
Q 014724 388 SRLVEL--GYKLVS-GGSDNHLVLVDLRP 413 (419)
Q Consensus 388 ~~L~~~--G~~v~~-~~t~~hlv~vd~~~ 413 (419)
+.|++. ++.... ......++++++..
T Consensus 347 ~~L~~l~~~~~~~~~~~~~g~~~~i~~~~ 375 (433)
T 1z7d_A 347 ENLKRELKDSKIVRDVRGKGLLCAIEFKN 375 (433)
T ss_dssp HHHHHHHTTCTTEEEEEEETTEEEEEECT
T ss_pred HHHHHHHHhCCCeEEEEeeeeEEEEEEcc
Confidence 999875 553221 01244678888754
No 201
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.72 E-value=8.1e-17 Score=160.77 Aligned_cols=258 Identities=15% Similarity=0.112 Sum_probs=158.9
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccC---
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--- 190 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~--- 190 (419)
.+|.|++++.+.+.. +.. .+. .| ..+...+ .++++++++|.+. .+++++|++|+..++.++..
T Consensus 57 ~~~~v~~a~~~~~~~-~~~--~~~-~~-~~~~~~~----l~~~la~~~g~~~-----v~~~~gg~~a~~~al~~~~~~~~ 122 (397)
T 2ord_A 57 SHPRLVEAIKDQAEK-LIH--CSN-LF-WNRPQME----LAELLSKNTFGGK-----VFFANTGTEANEAAIKIARKYGK 122 (397)
T ss_dssp TCHHHHHHHHHHHHH-CSC--CCT-TS-EEHHHHH----HHHHHHHTTTSCE-----EEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-ccc--Ccc-cc-CCHHHHH----HHHHHHHhcCCCe-----EEEeCCHHHHHHHHHHHHHHHhh
Confidence 479999999888754 322 111 12 2232333 4477888888432 25667789999999988763
Q ss_pred ---C-CCEEEEeCCCCCccccCccccccccccccccc-----c-----EEEecccCCCCCCCCHHHHHHHhhhcCCeEEE
Q 014724 191 ---P-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-----F-----ESMPYRLDESTGLVDYDMLEKTAILFRPKLII 256 (419)
Q Consensus 191 ---p-GD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~-----~-----~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi 256 (419)
+ +|+|++.++.+.+.... .+...|.. + .+..++. .|+++|++.+++ ++++|+
T Consensus 123 ~~~~~~~~vi~~~~~yh~~~~~-------~~~~~g~~~~~~~~~p~~~~~~~~~~------~d~~~l~~~l~~-~~~~v~ 188 (397)
T 2ord_A 123 KKSEKKYRILSAHNSFHGRTLG-------SLTATGQPKYQKPFEPLVPGFEYFEF------NNVEDLRRKMSE-DVCAVF 188 (397)
T ss_dssp HHCTTCCEEEEEBTCCCCSSHH-------HHHHSBCHHHHGGGCSCCTTEEEECT------TCHHHHHHHCCT-TEEEEE
T ss_pred cCCCCCceEEEEcCCcCCCchh-------hhhccCChhhccccCCCCCCeeEecC------CCHHHHHHHhhc-CeEEEE
Confidence 5 47899888876443211 11222321 0 0222222 389999999874 789999
Q ss_pred EcCCCCCCc------CChHHHHHHHHHhCCEEEEeccccccccccCCcCC--CCC-CCcEEEeCCCCcCC-CCCeeEEEE
Q 014724 257 AGASAYPRD------FDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK-YCDVVTTTTHKSLR-GPRGGMIFF 326 (419)
Q Consensus 257 ~~~s~~p~~------~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~--~~~-~~Div~~S~hK~l~-GprgG~i~~ 326 (419)
+++++||+- .++++|+++|++||++||+|++|. |+...+.... .++ ..|++ |+||+|. |.|.|++++
T Consensus 189 ~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~G~r~G~~~~ 265 (397)
T 2ord_A 189 LEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQC-GMGRTGKLFAYQKYGVVPDVL--TTAKGLGGGVPIGAVIV 265 (397)
T ss_dssp ECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSHHHHHTCCCSEE--EECGGGGTTSCCEEEEE
T ss_pred EecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEeccc-CCccCccchhhhhhCCCCCee--eeccccCCCcCeEEEEE
Confidence 998888742 478999999999999999999984 6543332110 011 36876 5589984 568899998
Q ss_pred eCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC--CcEEec-CCCc
Q 014724 327 KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL--GYKLVS-GGSD 403 (419)
Q Consensus 327 ~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~--G~~v~~-~~t~ 403 (419)
+++ +. .+......... +++....+++..+++.... ++..+++.++++++.+.|++. +++++. ....
T Consensus 266 ~~~------~~-~l~~~~~~~~~-~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~ 334 (397)
T 2ord_A 266 NER------AN-VLEPGDHGTTF-GGNPLACRAGVTVIKELTK---EGFLEEVEEKGNYLMKKLQEMKEEYDVVADVRGM 334 (397)
T ss_dssp CST------TC-CCCTTSSCCSS-TTCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEE
T ss_pred chH------hc-ccCCCCcCCCC-CCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHHhCCceEEEEEE
Confidence 873 33 44321111112 2233334444456666543 356777888889999999875 343211 0123
Q ss_pred ceeEEEEeCC
Q 014724 404 NHLVLVDLRP 413 (419)
Q Consensus 404 ~hlv~vd~~~ 413 (419)
.+++++++..
T Consensus 335 g~~~~~~~~~ 344 (397)
T 2ord_A 335 GLMIGIQFRE 344 (397)
T ss_dssp TTEEEEEECT
T ss_pred eEEEEEEECC
Confidence 4667888753
No 202
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.72 E-value=1.7e-16 Score=160.26 Aligned_cols=270 Identities=15% Similarity=0.153 Sum_probs=163.1
Q ss_pred hccccccc---CC--CChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCCh
Q 014724 103 KSLELIAS---EN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG 177 (419)
Q Consensus 103 ~~i~L~~s---en--~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sG 177 (419)
..|++..+ .+ +.+|.|++++.+.+.. +.. .... + ..+... .+++++++++|.+. + ++++||
T Consensus 58 ~~lD~~~~~~~~~lG~~~p~v~~ai~~~~~~-~~~--~~~~-~-~~~~~~----~l~~~la~~~g~~~----v-~~~~gg 123 (420)
T 2pb2_A 58 EYIDFAGGIAVTALGHCHPALVEALKSQGET-LWH--TSNV-F-TNEPAL----RLGRKLIDATFAER----V-LFMNSG 123 (420)
T ss_dssp EEEESSHHHHTCTTCBTCHHHHHHHHHHHTT-CCC--CCTT-S-CCHHHH----HHHHHHHHHSSCSE----E-EEESSH
T ss_pred EEEEccccccccccCCCCHHHHHHHHHHHHh-ccc--ccCc-c-CCHHHH----HHHHHHHhhCCCCe----E-EEeCCH
Confidence 34566554 22 2479999999988753 321 1111 2 123223 34577888888532 2 566778
Q ss_pred HHHHHHHHHHccC-------CC-CEEEEeCCCCCccccCccccccccccccccc-----c-----EEEecccCCCCCCCC
Q 014724 178 SPANFEVYTAILK-------PH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-----F-----ESMPYRLDESTGLVD 239 (419)
Q Consensus 178 t~A~~~~~~all~-------pG-D~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~-----~-----~~v~~~~~~~~~~iD 239 (419)
++|+..++.++.. +| |+|++.++.+.+.... .+...|.. + .+..++ ..|
T Consensus 124 teA~~~al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~-------~~~~~g~~~~~~~~~p~~~~~~~~~------~~d 190 (420)
T 2pb2_A 124 TEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLF-------TVSVGGQPKYSDGFGPKPADIIHVP------FND 190 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHH-------HHHHSSCHHHHTTSSSCCSCEEEEC------TTC
T ss_pred HHHHHHHHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHH-------HHHhcCCccccccCCCCCCCeEEec------CCC
Confidence 9999999988865 77 4999998877554211 01122221 0 122221 148
Q ss_pred HHHHHHHhhhcCCeEEEEcCCCCCC------cCChHHHHHHHHHhCCEEEEeccccccccccCCcC--CCCC-CCcEEEe
Q 014724 240 YDMLEKTAILFRPKLIIAGASAYPR------DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTT 310 (419)
Q Consensus 240 ~d~Le~~l~~~~pklIi~~~s~~p~------~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~--~~~~-~~Div~~ 310 (419)
+++|++.+++ ++++|+++.++++. ..++++|+++|++||++||+|++| .|+...|... ..++ ..|++
T Consensus 191 ~~~le~~i~~-~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~-~g~~~~g~~~~~~~~~~~~dii-- 266 (420)
T 2pb2_A 191 LHAVKAVMDD-HTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQ-CGMGRTGDLFAYMHYGVTPDIL-- 266 (420)
T ss_dssp HHHHHHHCCT-TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTT-TTTTTTSSSSHHHHHTCCCSEE--
T ss_pred HHHHHHHhcc-CceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCC-cCcccCCcHHHHHhcCCCCCeE--
Confidence 9999999874 78999988765542 246899999999999999999998 5654333211 0112 46877
Q ss_pred CCCCcC-CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHH
Q 014724 311 TTHKSL-RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASR 389 (419)
Q Consensus 311 S~hK~l-~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~ 389 (419)
|++|+| +|.+.|++++++ ++.+.+.........++ +....++...+++.+.. +.+.+++.+++++|.+.
T Consensus 267 t~sK~l~~G~~iG~~~~~~------~l~~~l~~~~~~~t~~~-~~~~~aa~~a~L~~~~~---~~~~~~~~~~~~~l~~~ 336 (420)
T 2pb2_A 267 TSAKALGGGFPVSAMLTTQ------EIASAFHVGSHGSTYGG-NPLACAVAGAAFDIINT---PEVLQGIHTKRQQFVQH 336 (420)
T ss_dssp EECGGGGTTSCCEEEEECH------HHHTTCC----CCEECC-CHHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHHH
T ss_pred EecccccCCCceEEEEEhH------HHHHhhcCCCcCcccCc-CHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHH
Confidence 468998 456889999887 56555543211122222 22333344446666543 45677888889999999
Q ss_pred HHhC--CcEEec-CCCcceeEEEEeCC
Q 014724 390 LVEL--GYKLVS-GGSDNHLVLVDLRP 413 (419)
Q Consensus 390 L~~~--G~~v~~-~~t~~hlv~vd~~~ 413 (419)
|++. +++.+. ......++++++..
T Consensus 337 L~~~~~~~~~~~~~~~~g~~~~v~~~~ 363 (420)
T 2pb2_A 337 LQAIDEQFDIFSDIRGMGLLIGAELKP 363 (420)
T ss_dssp HHHHHHHHCCEEEEEEETTEEEEEECG
T ss_pred HHHHHhcCCCeEEEEecceEEEEEECC
Confidence 8774 333211 01235678888753
No 203
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.71 E-value=9.7e-16 Score=154.57 Aligned_cols=275 Identities=15% Similarity=0.065 Sum_probs=157.3
Q ss_pred cccccccC--CCC----hHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCC-CCCCceeEecCC
Q 014724 104 SLELIASE--NFT----SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLS 176 (419)
Q Consensus 104 ~i~L~~se--n~~----~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~-~~~~~v~V~~~s 176 (419)
.|++.++. +++ +|.|++|+.+.+... .. +...+| . .+... ..++++++++|.+ ++ + .+++++
T Consensus 44 ~lD~~~~~~~~~lG~~~~p~v~~a~~~~~~~~-~~-~~~~~~-~-~~~~~----~l~~~la~~~~~~~~~-~--v~~~~g 112 (419)
T 2eo5_A 44 YLDFTSGIGVNNLGWPSHPEVIKIGIEQMQKL-AH-AAANDF-Y-NIPQL----ELAKKLVTYSPGNFQK-K--VFFSNS 112 (419)
T ss_dssp EEESSGGGGTTTTCBSCCHHHHHHHHHHHTTS-CC-CSCSCS-C-CHHHH----HHHHHHHHHSSCSSCE-E--EEEESS
T ss_pred EEEccCChhhhccCCCCCHHHHHHHHHHHhhC-cc-cccccc-C-CHHHH----HHHHHHHHhCCCCcCC-E--EEEeCc
Confidence 45665554 333 799999999887532 11 111112 1 12222 2346788999987 42 1 244556
Q ss_pred hHHHHHHHHHHccC-CCCEEEEeCCCCCccccCcccc-----cc-ccccccccccEEEecccCCCCCC------------
Q 014724 177 GSPANFEVYTAILK-PHDRIMGLDLPHGGHLSHGFMT-----PK-RRVSGTSIYFESMPYRLDESTGL------------ 237 (419)
Q Consensus 177 Gt~A~~~~~~all~-pGD~Vl~~~~~~~g~~s~~~~~-----~~-~~i~~~g~~~~~v~~~~~~~~~~------------ 237 (419)
|++|+..++.++.. +||+|++.+|.+.+........ .. .........+..+++ + +++.
T Consensus 113 g~ea~~~ai~~~~~~~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~-~~~~~~~g~~~~~~~~ 189 (419)
T 2eo5_A 113 GTEAIEASIKVVKNTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPY--P-NPYRNPWHINGYENPS 189 (419)
T ss_dssp HHHHHHHHHHHHHTTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECC--C-CSSSCTTCCCTTTCHH
T ss_pred hHHHHHHHHHHHHHhhCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECC--C-ccccccccccccccch
Confidence 78999999887644 4999999998875432110000 00 000001112334443 2 1221
Q ss_pred ----CCHHHHH-HHhhh----cCCeEEEEcCCCCC--CcCC----hHHHHHHHHHhCCEEEEeccccccccccCCc-C-C
Q 014724 238 ----VDYDMLE-KTAIL----FRPKLIIAGASAYP--RDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-D 300 (419)
Q Consensus 238 ----iD~d~Le-~~l~~----~~pklIi~~~s~~p--~~~d----l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~-~-~ 300 (419)
+|+++|+ +.+++ .++++|+++..+++ ...+ +++|+++|++||++||+|++|. |+...+.. . .
T Consensus 190 ~~~~~~~~~l~~~~i~~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~-~~g~~g~~~~~~ 268 (419)
T 2eo5_A 190 ELVNRVIEFIEDYIFVNLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQM-GLGRTGKLFAIE 268 (419)
T ss_dssp HHHHHHHHHHHHTHHHHTCCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSGGG
T ss_pred hhHHHHHHHHHHHHHhhccCCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCccCcchhhHH
Confidence 4789999 88864 35567777654333 2344 8999999999999999999974 44322221 0 1
Q ss_pred CCC-CCcEEEeCCCCcCC-C-CCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHH
Q 014724 301 PFK-YCDVVTTTTHKSLR-G-PRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQN 377 (419)
Q Consensus 301 ~~~-~~Div~~S~hK~l~-G-prgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~ 377 (419)
.+. ..|++ |++|+|. | .|.|++++++ ++. .+ .....+..+. +...+++...+++... +..+
T Consensus 269 ~~~~~~d~~--t~sK~~~~G~~riG~~~~~~------~~~-~~-~~~~~~t~~~-n~~~~~aa~aal~~~~-----~~~~ 332 (419)
T 2eo5_A 269 NFNTVPDVI--TLAKALGGGIMPIGATIFRK------DLD-FK-PGMHSNTFGG-NALACAIGSKVIDIVK-----DLLP 332 (419)
T ss_dssp GGTCCCSEE--EECGGGGTTTSCCEEEEEEG------GGC-CC-------CCCC-CHHHHHHHHHHHHHHH-----HHHH
T ss_pred hcCCCCCEE--EecccccCCccceEEEEEch------Hhh-cC-CcccCCCCCC-CHHHHHHHHHHHHHHH-----HHHH
Confidence 112 45766 5779984 5 7889999987 343 33 2111122222 2333444444565432 2678
Q ss_pred HHHHHHHHHHHHHHhCCcEEecCCCcceeEEEEeC
Q 014724 378 KVVSNCRALASRLVELGYKLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 378 ~v~~n~~~l~~~L~~~G~~v~~~~t~~hlv~vd~~ 412 (419)
++.+++++|.+.|++. +..+. ...+++++++.
T Consensus 333 ~~~~~~~~l~~~L~~~-~~~~~--~~g~~~~i~~~ 364 (419)
T 2eo5_A 333 HVNEIGKIFAEELQGL-ADDVR--GIGLAWGLEYN 364 (419)
T ss_dssp HHHHHHHHHHHHHTTS-SSEEE--EETTEEEEECS
T ss_pred HHHHHHHHHHHHHHHh-hhheE--eeeEEEEEEEe
Confidence 8888999999999886 33332 23467788875
No 204
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.71 E-value=4.7e-16 Score=156.39 Aligned_cols=266 Identities=15% Similarity=0.028 Sum_probs=157.8
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHH---HccC
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYT---AILK 190 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~---all~ 190 (419)
.++.|++++.+.+.. +.. ....++ ..+...+ .++.++++++.+..+ ..+++++|++|+..++. ++.+
T Consensus 58 ~~~~v~~a~~~~~~~-~~~--~~~~~~-~~~~~~~----l~~~la~~~~~~~~~--~v~~~~g~~~a~~~~~~~a~~~~~ 127 (426)
T 1sff_A 58 LHPKVVAAVEAQLKK-LSH--TCFQVL-AYEPYLE----LCEIMNQKVPGDFAK--KTLLVTTGSEAVENAVKIARAATK 127 (426)
T ss_dssp TCHHHHHHHHHHTTT-CSC--CCTTTE-ECHHHHH----HHHHHHHHSSCSSCE--EEEEESSHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHh-CCC--cccccc-CCHHHHH----HHHHHHHhCCccccc--EEEEeCchHHHHHHHHHHHHHhhC
Confidence 579999999888743 221 111122 2232233 446788888322211 22455667889999987 6778
Q ss_pred CCCEEEEeCCCCCccccCcccccccccccccc-------------ccEEEecccCC--CCCCCCHHHHHHHhhh----cC
Q 014724 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-------------YFESMPYRLDE--STGLVDYDMLEKTAIL----FR 251 (419)
Q Consensus 191 pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~-------------~~~~v~~~~~~--~~~~iD~d~Le~~l~~----~~ 251 (419)
+| +|++.+|.+.+..... +...|. .+..++++.+. .++.+|+++|++.+++ .+
T Consensus 128 ~~-~vi~~~p~y~~~~~~~-------~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ 199 (426)
T 1sff_A 128 RS-GTIAFSGAYHGRTHYT-------LALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPED 199 (426)
T ss_dssp CC-EEEEETTCCCCSSHHH-------HHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTCCGGG
T ss_pred CC-eEEEECCCcCCCchHh-------hhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhccCCCc
Confidence 87 8888888875543110 111111 13334443210 1235799999999864 46
Q ss_pred CeEEEEcC-CCC-CCcCC----hHHHHHHHHHhCCEEEEeccccccccccCCcC--CCCC-CCcEEEeCCCCcC-CCCCe
Q 014724 252 PKLIIAGA-SAY-PRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSL-RGPRG 321 (419)
Q Consensus 252 pklIi~~~-s~~-p~~~d----l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~--~~~~-~~Div~~S~hK~l-~Gprg 321 (419)
+++|+++. ++| +...+ +++|.++|++||++||+|++|. |+...+... ...+ ..|++ |+||+| .|.|.
T Consensus 200 ~~~v~~~p~~~ntG~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~di~--s~sK~~~~Glri 276 (426)
T 1sff_A 200 IAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQS-GAGRTGTLFAMEQMGVAPDLT--TFAKSIAGGFPL 276 (426)
T ss_dssp EEEEEECSBCTTTTSCBCCHHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSGGGGTTSCCSEE--EECGGGGTSSCC
T ss_pred eEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEechhh-ccCcccchhhhhhcCCCCCEE--EEcccccCCCce
Confidence 77887753 233 43456 8999999999999999999976 654333211 1111 35665 678998 45677
Q ss_pred eEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCC--cE---
Q 014724 322 GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVELG--YK--- 396 (419)
Q Consensus 322 G~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~G--~~--- 396 (419)
|++++++ ++.+.+.........+ ++....+++..+++.+.+ ..+.+++.++++++.+.|++.+ +.
T Consensus 277 G~~~~~~------~~~~~l~~~~~~~~~~-~~~~~~~a~~aal~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 346 (426)
T 1sff_A 277 AGVTGRA------EVMDAVAPGGLGGTYA-GNPIACVAALEVLKVFEQ---ENLLQKANDLGQKLKDGLLAIAEKHPEIG 346 (426)
T ss_dssp EEEEEEH------HHHTTSCTTSBCCSSS-SCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHTCTTEE
T ss_pred EEEEEcH------HHHhhhccCCcCcCCC-CCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCCeE
Confidence 9999987 6666655322222222 233334444456665432 2456777788888888887642 32
Q ss_pred EecCCCcceeEEEEeC
Q 014724 397 LVSGGSDNHLVLVDLR 412 (419)
Q Consensus 397 v~~~~t~~hlv~vd~~ 412 (419)
... ...+++|+++.
T Consensus 347 ~~~--~~g~~~~~~~~ 360 (426)
T 1sff_A 347 DVR--GLGAMIAIELF 360 (426)
T ss_dssp EEE--EETTEEEEEEB
T ss_pred EEE--EEEEEEEEEEe
Confidence 222 23578899985
No 205
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.70 E-value=4.5e-17 Score=165.03 Aligned_cols=239 Identities=9% Similarity=0.063 Sum_probs=153.8
Q ss_pred chhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccC----CCCEEEEeCCCCCccccCccccccccc
Q 014724 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK----PHDRIMGLDLPHGGHLSHGFMTPKRRV 217 (419)
Q Consensus 142 g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~----pGD~Vl~~~~~~~g~~s~~~~~~~~~i 217 (419)
|......+|+.+..++.+++|++.. . ..++++++|.+++++..+.++ ++|.|+++...|.+.+ +.+
T Consensus 92 ~~~~~~~~e~~~~~~~~~~lGlp~~-~-~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~--------kAl 161 (450)
T 3bc8_A 92 GSSLLNKITNSLVLNVIKLAGVHSV-A-SCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCF--------KSM 161 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCTTC-C-EEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHH--------HHH
T ss_pred CCcHHHHHHHHHHHHHHHhCCCCCC-c-eEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHH--------HHH
Confidence 3344557788888999999999864 2 225555666444444444444 3899998876665543 345
Q ss_pred cccccccEEEecccCCCCCCCCHHHHHHHhhhcC--Ce-EEEEcCCCCC--CcCChHHHHHHHHHhCCEEEEeccccccc
Q 014724 218 SGTSIYFESMPYRLDESTGLVDYDMLEKTAILFR--PK-LIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGL 292 (419)
Q Consensus 218 ~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~--pk-lIi~~~s~~p--~~~dl~~I~~ia~~~ga~livD~ah~~Gl 292 (419)
.+.|.....++...+++.+.+|++.|+++++++. .+ +|++..++|+ ...|+++|+++|++||++++||+||+...
T Consensus 162 ~l~Gl~p~~v~~~~~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~VD~A~G~~~ 241 (450)
T 3bc8_A 162 VTAGFEPVVIENVLEGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQS 241 (450)
T ss_dssp HHTTCEEEEECCEEETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTC
T ss_pred HHcCCeeEEEEeeecCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecCHHHHHHHHHHCCCeEEEECCCchhh
Confidence 6778765555433333467899999999998753 23 4455555565 46899999999999999999999986433
Q ss_pred cccCCcC-CCC--CCCcEEEeCCCCcCCCCCe-eEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhc
Q 014724 293 VAASVVA-DPF--KYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ 368 (419)
Q Consensus 293 ~~~g~~~-~~~--~~~Div~~S~hK~l~Gprg-G~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~ 368 (419)
.+...++ ..+ +++|+++.|+||++..|-+ ++++.+++ ++.+.+.. .+++.+++ ++. + .+...+....
T Consensus 242 ~~~~~l~~~a~~~~~AD~~v~S~HK~l~a~~~~~~l~~rd~-----~~~~~~~~-~~~g~~s~-Sps-L-~l~~~l~~~G 312 (450)
T 3bc8_A 242 SKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNE-----PFIQDISK-MYPGRASA-SPS-L-DVLITLLSLG 312 (450)
T ss_dssp HHHHHHHHHHHHHSCCCEEEEEHHHHHSCCSSCEEEEESCH-----HHHHHHHH-HSCSCBCS-HHH-H-HHHHHHHHHH
T ss_pred hhhHhHHHHHhcccCCCEEEECCccCCCchhccEEEEecCH-----HHHHHHHH-HhhcCCcc-cHH-H-HHHHHHHHHH
Confidence 2211111 112 4799999999999988855 66666653 55555543 34443322 221 1 2222333333
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhC----CcEEec
Q 014724 369 SPEFKVYQNKVVSNCRALASRLVEL----GYKLVS 399 (419)
Q Consensus 369 ~~~~~~~~~~v~~n~~~l~~~L~~~----G~~v~~ 399 (419)
.+++++..++..++++++++.|++. |+.+..
T Consensus 313 ~~g~~~~i~~~~~~a~~l~~~l~~~~~~~g~~~l~ 347 (450)
T 3bc8_A 313 CSGYRKLLKERKEMFVYLSTQLKKLAEAHNERLLQ 347 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHhcCceecC
Confidence 3456777777888899999999663 776653
No 206
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.70 E-value=3.7e-17 Score=164.26 Aligned_cols=252 Identities=13% Similarity=0.122 Sum_probs=162.0
Q ss_pred chhHHH-HHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccCC----CCEEEEeCCCCCccccCcccccccc
Q 014724 142 GNEYID-ELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKP----HDRIMGLDLPHGGHLSHGFMTPKRR 216 (419)
Q Consensus 142 g~~~~~-~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~p----GD~Vl~~~~~~~g~~s~~~~~~~~~ 216 (419)
|.-... .-|.++.+|++.+ |++.. + ..+++..+|.++++++.+.+++ ||+|+++...|.+.+ +.
T Consensus 110 Gssll~~ltn~l~ld~L~~~-G~~~~-~-~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~--------kA 178 (501)
T 3hl2_A 110 GSSLLNKITNSLVLDIIKLA-GVHTV-A-NCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCF--------KS 178 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHT-TCTTC-C-EEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHH--------HH
T ss_pred chHHHHHHHHHHHHHHHHHc-CCCCC-C-cEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHH--------HH
Confidence 444443 3344455666655 99864 2 2244444466777777777664 499999887776554 34
Q ss_pred ccccccccEEEecccCCCCCCCCHHHHHHHhhhcCC--eEEE-EcCCCC-C-CcCChHHHHHHHHHhCCEEEEecccccc
Q 014724 217 VSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRP--KLII-AGASAY-P-RDFDYPRMRQIADAVGALLMMDMAHISG 291 (419)
Q Consensus 217 i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~p--klIi-~~~s~~-p-~~~dl~~I~~ia~~~ga~livD~ah~~G 291 (419)
+.+.|.....++..++++...+|++.+|++++++.+ .+++ ...+.| | ...|+++|+++|++||++++||+||+.-
T Consensus 179 liL~Gl~Pv~V~p~~d~~~~~id~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~gIpllVDeAhGah 258 (501)
T 3hl2_A 179 MITAGFEPVVIENVLEGDELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYGVQ 258 (501)
T ss_dssp HHHTTCEEEEECEEEETTEEEECHHHHHHHHHHHCGGGEEEEEEECSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTCTT
T ss_pred HHHcCCeEEEEeeeecccccCCCHHHHHHHHHhcCCCcEEEEEecCCCCCCcccccHHHHHHHHHHcCCeEEEeCcchhh
Confidence 567787555554434434568999999999987643 3333 344455 4 3479999999999999999999998654
Q ss_pred ccccCCcC-CCCC-C-CcEEEeCCCCcCCCCCee-EEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHh
Q 014724 292 LVAASVVA-DPFK-Y-CDVVTTTTHKSLRGPRGG-MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHA 367 (419)
Q Consensus 292 l~~~g~~~-~~~~-~-~Div~~S~hK~l~GprgG-~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~ 367 (419)
+.+....+ +.+. + +|+++.|+||++..|-|| +++.+++ ++.+++.. .+|+.+++. ..+.+..++..+
T Consensus 259 ~~~~~~lp~sA~~~GrAD~vVqS~HK~llvpIGG~ii~~~d~-----e~l~~~~~-~yPGr~S~S---psldl~~tLL~l 329 (501)
T 3hl2_A 259 SSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFND-----SFIQEISK-MYPGRASAS---PSLDVLITLLSL 329 (501)
T ss_dssp CHHHHHHHHHHHHHSCCCEEEEEHHHHHCCCSSCEEEEESCH-----HHHHHHHH-TSCSCBCSH---HHHHHHHHHHHH
T ss_pred hhhhhhhHHHHHhcCCCcEEEecccccceeecCceEEEeCCH-----HHHHHHHH-hCCCCCCCc---HHHHHHHHHHHH
Confidence 32211111 1122 5 999999999998888665 4446654 66666643 456655321 122233455566
Q ss_pred cChHHHHHHHHHHHHHHHHHHHHHhC----CcEEecCCCccee-EEEEeCCc
Q 014724 368 QSPEFKVYQNKVVSNCRALASRLVEL----GYKLVSGGSDNHL-VLVDLRPM 414 (419)
Q Consensus 368 ~~~~~~~~~~~v~~n~~~l~~~L~~~----G~~v~~~~t~~hl-v~vd~~~~ 414 (419)
..+++++..++..+++++|++.|+++ |-++.. ...|.+ +-+.+..+
T Consensus 330 Gr~Gy~~ll~e~~ela~~L~~~L~~la~~~ge~ll~-~~~n~is~a~tl~~~ 380 (501)
T 3hl2_A 330 GSNGYKKLLKERKEMFSYLSNQIKKLSEAYNERLLH-TPHNPISLAMTLKTL 380 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCBCC-CTTCSSEEEEECTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhcC-CCCCceeEEEecccc
Confidence 66778999999999999999999883 655553 122444 33455443
No 207
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.69 E-value=4e-15 Score=150.29 Aligned_cols=266 Identities=14% Similarity=0.077 Sum_probs=146.9
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHcc----
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all---- 189 (419)
.+|.|++|+.+.+.. ... +....+ ..+ ..+..+++++++++.+.+ + .+++++|++|+..++.+++
T Consensus 46 ~~p~v~~a~~~~~~~-~~~-~~~~~~--~~~----~~~~l~~~la~~~~~~~~-~--v~~~~gg~ea~~~al~~~~~~~~ 114 (430)
T 3i4j_A 46 GRAEVGERMAAQAAR-LPF-VHGSQF--SSD----VLEEYAGRLARFVGLPTF-R--FWAVSGGSEATESAVKLARQYHV 114 (430)
T ss_dssp CCHHHHHHHHHHHHH-CCC-CCTTTC--EEH----HHHHHHHHHHHHTTCTTC-E--EEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-ccc-cccccc--CCH----HHHHHHHHHHHhCCCCCC-E--EEEeCcHHHHHHHHHHHHHHHHH
Confidence 389999999887754 221 111111 112 222345788899987764 2 2555668999999998876
Q ss_pred ----CCCCEEEEeCCCCCccccCcccccccccccccc--------------ccEEEecccCCCCCCCCHHHHHHHhhh--
Q 014724 190 ----KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI--------------YFESMPYRLDESTGLVDYDMLEKTAIL-- 249 (419)
Q Consensus 190 ----~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~--------------~~~~v~~~~~~~~~~iD~d~Le~~l~~-- 249 (419)
.++|+|++.++.+.++.... ....+. .+..++++.....+..|+++|++.+++
T Consensus 115 ~~g~~~~~~vi~~~~~yhg~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~ 187 (430)
T 3i4j_A 115 ERGEPGRFKVITRVPSYHGASLGS-------LAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLEREG 187 (430)
T ss_dssp HTTCTTCCEEEEETTC--------------------------------CGGGSCEECCCCTTSCHHHHHTHHHHHHHHHC
T ss_pred hcCCCCCcEEEEEeCCcCCCCccc-------ccccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHHHHHhcC
Confidence 45789999998875543211 111111 112222110000023467899999874
Q ss_pred -cCCeEEEEcCCCC-C--CcCC----hHHHHHHHHHhCCEEEEeccccccccccCCcC--CCC-C-CCcEEEeCCCCcC-
Q 014724 250 -FRPKLIIAGASAY-P--RDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPF-K-YCDVVTTTTHKSL- 316 (419)
Q Consensus 250 -~~pklIi~~~s~~-p--~~~d----l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~--~~~-~-~~Div~~S~hK~l- 316 (419)
.++++|+++..++ + ...+ +++|+++|++||++||+|++|. |+...+... ..+ + ..|+++ ++|+|
T Consensus 188 ~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~-~~~~~g~~~~~~~~~~~~~di~t--~sK~l~ 264 (430)
T 3i4j_A 188 PETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMS-GMGRCGSPLALSRWSGVTPDIAV--LGKGLA 264 (430)
T ss_dssp GGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSGGGGTTTCCCSEEE--ECGGGT
T ss_pred CCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCcccchhhhhhhcCCCCcEEE--Eccccc
Confidence 3456666665443 2 1222 8999999999999999999964 543333211 111 1 346665 66998
Q ss_pred CC-CCeeEEEEeCCCcchhhHHHHhhhc----ccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHH
Q 014724 317 RG-PRGGMIFFKKDPVLGVELESAINNA----VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLV 391 (419)
Q Consensus 317 ~G-prgG~i~~~~~~~~~~~l~~~i~~~----~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~ 391 (419)
.| +|.|++++++ ++.+.+... ......+. +....++...+++.... +.+.+++.++.+++.+.|+
T Consensus 265 ~G~~r~G~~~~~~------~i~~~~~~~~~~~~~~~t~~~-~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~~~~~l~ 334 (430)
T 3i4j_A 265 AGYAPLAGLLAAP------QVYETVMGGSGAFMHGFTYAG-HPVSVAAGLSVLDIVER---EDLTGAAKERGAQLLAGLQ 334 (430)
T ss_dssp TTSSCCEEEEECH------HHHHHHHHTTCBCCCCCTTTT-CHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHH
T ss_pred CCccccEEEEECH------HHHHHHhccCCcccccCCCCC-CHHHHHHHHHHHHHHHc---ccHHHHHHHHHHHHHHHHH
Confidence 45 7889999987 677776642 11122222 22233333345655432 2345566666666666665
Q ss_pred hC-----CcEEecCCCcceeEEEEeC
Q 014724 392 EL-----GYKLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 392 ~~-----G~~v~~~~t~~hlv~vd~~ 412 (419)
+. ++..+. ....++++++.
T Consensus 335 ~~~~~~~~~~~~~--~~g~~~~~~~~ 358 (430)
T 3i4j_A 335 ALQARFPQMMQVR--GTGLLLGVVLG 358 (430)
T ss_dssp HHHHHCTTEEEEE--EETTEEEEEEC
T ss_pred HHHHhCCCeEEEE--EEEEEEEEEec
Confidence 52 344433 23446777764
No 208
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.69 E-value=1.2e-15 Score=155.03 Aligned_cols=267 Identities=15% Similarity=0.033 Sum_probs=158.3
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCC-CCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccC--
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRY-YGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK-- 190 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~-~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~-- 190 (419)
.+|.|++|+.+.+.+. . + .++ ....+... .++++++++++.+.+ ..+++++|++|+..++.++..
T Consensus 67 ~~~~v~~a~~~~~~~~-~--~--~~~~~~~~~~~~----~l~~~la~~~~~~~~---~v~~~~ggsea~~~al~~~~~~~ 134 (449)
T 3a8u_X 67 TRKEIQEAVAKQLSTL-D--Y--SPGFQYGHPLSF----QLAEKITDLTPGNLN---HVFFTDSGSECALTAVKMVRAYW 134 (449)
T ss_dssp SCHHHHHHHHHHTTTC-S--C--CCSSSCCCHHHH----HHHHHHHTTSSTTEE---EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhC-C--C--ccccccCCHHHH----HHHHHHHHhCCCCCC---EEEEcCcHHHHHHHHHHHHHHHH
Confidence 4799999998887542 1 1 111 11122222 344778888876653 225566789999999988764
Q ss_pred ------CCCEEEEeCCCCCccccCccccccccccccc------------cccEEEecccCC-CC-CCCC--------HHH
Q 014724 191 ------PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS------------IYFESMPYRLDE-ST-GLVD--------YDM 242 (419)
Q Consensus 191 ------pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g------------~~~~~v~~~~~~-~~-~~iD--------~d~ 242 (419)
+||+|++.++.+.+..... +...+ .++..++++... .+ ..+| +++
T Consensus 135 ~~~g~~~~~~vi~~~~~yhg~~~~~-------~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~ 207 (449)
T 3a8u_X 135 RLKGQATKTKMIGRARGYHGVNIAG-------TSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALADE 207 (449)
T ss_dssp HHTTCTTCCEEEEETTCCCCSSHHH-------HHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCcCCCChhh-------hhccCChhhccccCCCCCCCeEecCCccccCccccCChHHHHHHHHHH
Confidence 7899999998875542110 11111 122444432110 00 1246 999
Q ss_pred HHHHhhh---cCCeEEEEcCCCC--CCcCC----hHHHHHHHHHhCCEEEEeccccccccccCCcCCCC---C-CCcEEE
Q 014724 243 LEKTAIL---FRPKLIIAGASAY--PRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K-YCDVVT 309 (419)
Q Consensus 243 Le~~l~~---~~pklIi~~~s~~--p~~~d----l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~---~-~~Div~ 309 (419)
|++.+++ .++++|+++..++ +...+ +++|+++|++||++||+|++|. |+...+.. ..+ . ..|++
T Consensus 208 le~~l~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~-~~g~~g~~-~~~~~~~~~~di~- 284 (449)
T 3a8u_X 208 LLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVIT-GFGRTGSM-FGADSFGVTPDLM- 284 (449)
T ss_dssp HHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSS-SHHHHHTCCCSEE-
T ss_pred HHHHHHhcCCCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEecccc-CccccCcc-hhhhhcCCCCCEE-
Confidence 9999874 2557777765433 33456 9999999999999999999983 33221211 011 1 35776
Q ss_pred eCCCCcCCC--CCeeEEEEeCCCcchhhHHHHhhhcc---------cCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHH
Q 014724 310 TTTHKSLRG--PRGGMIFFKKDPVLGVELESAINNAV---------FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNK 378 (419)
Q Consensus 310 ~S~hK~l~G--prgG~i~~~~~~~~~~~l~~~i~~~~---------~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~ 378 (419)
|++|+|.+ .|.|++++++ ++.+.+.... ..... +.+....++...+++.+.+ +.+.++
T Consensus 285 -s~sK~l~~G~~~~G~~~~~~------~~~~~l~~~~~~~~~~~~~~~~t~-~~~~~~~aa~~aal~~~~~---~~~~~~ 353 (449)
T 3a8u_X 285 -CIAKQVTNGAIPMGAVIAST------EIYQTFMNQPTPEYAVEFPHGYTY-SAHPVACAAGLAALCLLQK---ENLVQS 353 (449)
T ss_dssp -EECGGGGTTSSCCEEEEEEH------HHHHHHHTCSSCTTSCSSCCCCTT-TTCHHHHHHHHHHHHHHHH---TTHHHH
T ss_pred -EEcccccCCCCceEEEEECH------HHHHHhhccCcccccccccccCCC-cccHHHHHHHHHHHHHHHh---cCHHHH
Confidence 56799955 7889988887 6766665421 11112 2223334444445655432 245777
Q ss_pred HHHHHHHHHHHHHhCC-cEEec-CCCcceeEEEEeCC
Q 014724 379 VVSNCRALASRLVELG-YKLVS-GGSDNHLVLVDLRP 413 (419)
Q Consensus 379 v~~n~~~l~~~L~~~G-~~v~~-~~t~~hlv~vd~~~ 413 (419)
+.++.+++.+.|++++ +..+. .....+++++++..
T Consensus 354 ~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~ 390 (449)
T 3a8u_X 354 VAEVAPHFEKALHGIKGAKNVIDIRNFGLAGAIQIAP 390 (449)
T ss_dssp HHHHHHHHHHHHHTTTTSTTEEEEEEETTEEEEEECC
T ss_pred HHHHHHHHHHHHHHHhcCCCeEEEeeeEEEEEEEEec
Confidence 8888899999998753 33221 01234678888864
No 209
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.68 E-value=4.2e-15 Score=150.50 Aligned_cols=274 Identities=16% Similarity=0.101 Sum_probs=156.1
Q ss_pred cccccccCC-----CChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChH
Q 014724 104 SLELIASEN-----FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS 178 (419)
Q Consensus 104 ~i~L~~sen-----~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt 178 (419)
.|++..+.. +.+|.|++++.+.+... . .|... .+..+ +.+.++++++++++...++ ..+++++|+
T Consensus 45 ~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~-~-~~~~~--~~~~~----~~~~l~~~la~~~~~~~~~--~v~~~~ggs 114 (439)
T 3dxv_A 45 LIDLSGAWGAASLGYGHPAIVAAVSAAAANP-A-GATIL--SASNA----PAVTLAERLLASFPGEGTH--KIWFGHSGS 114 (439)
T ss_dssp EEESSTTTTTCTTCBSCHHHHHHHHHHHHSC-S-CSCSS--SSEEH----HHHHHHHHHHHTTTCTTTE--EEEEESSHH
T ss_pred EEECCCchhhccCCCCCHHHHHHHHHHHHhc-c-Ccccc--ccCCH----HHHHHHHHHHHhCCCCCCC--EEEEeCCHH
Confidence 455654432 25899999998887542 1 22211 11122 3334557888888654411 236677889
Q ss_pred HHHHHHHHHc--cCCCCEEEEeCCCCCccccCcccccccccccccccc------------EEEecccCCCCCCC-----C
Q 014724 179 PANFEVYTAI--LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYF------------ESMPYRLDESTGLV-----D 239 (419)
Q Consensus 179 ~A~~~~~~al--l~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~------------~~v~~~~~~~~~~i-----D 239 (419)
+|+..++.++ ..++++|++.++.+.+..... +...+... ....++.+ ..+.. |
T Consensus 115 ea~~~al~~~~~~~~~~~vi~~~~~yhg~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d 186 (439)
T 3dxv_A 115 DANEAAYRAIVKATGRSGVIAFAGAYHGCTVGS-------MAFSGHSVQADAAKADGLILLPYPDPYR-PYRNDPTGDAI 186 (439)
T ss_dssp HHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHH-------HCC-------------CEEEECCCCSSS-CBTTBTTSHHH
T ss_pred HHHHHHHHHHHHHhCCCEEEEECCCCCCCcHHH-------HhhcCCCchhhccccCCCCCCcEEcCCC-cccccccHHHH
Confidence 9999999875 346778888887764432111 11112100 01111111 11112 7
Q ss_pred HHHHHHHhh---hcCCeEEEEcCCCCC--CcCC----hHHHHHHHHHhCCEEEEeccccccccccCCc-C-CCCC-CCcE
Q 014724 240 YDMLEKTAI---LFRPKLIIAGASAYP--RDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDV 307 (419)
Q Consensus 240 ~d~Le~~l~---~~~pklIi~~~s~~p--~~~d----l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~-~-~~~~-~~Di 307 (419)
+++|+++++ ..++++|+++.++++ ...+ +++|+++|++||++||+|++|. |+...+.. . ..++ ..|+
T Consensus 187 ~~~le~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~-g~g~~g~~~~~~~~~~~~di 265 (439)
T 3dxv_A 187 LTLLTEKLAAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKV-GLARSGRLHCFEHEGFVPDI 265 (439)
T ss_dssp HHHHHHHHHTSCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT-CTTTTSSSSGGGGTTCCCSE
T ss_pred HHHHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCchhhHHHhcCCCCCE
Confidence 999999984 345678888765543 3344 8999999999999999999975 54333321 1 1111 3577
Q ss_pred EEeCCCCcC-CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHH
Q 014724 308 VTTTTHKSL-RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRAL 386 (419)
Q Consensus 308 v~~S~hK~l-~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l 386 (419)
+ |++|+| +|+|.|++++++ ++.+.+......... + +....++...+++.... +.+.+++.++.+++
T Consensus 266 ~--s~sK~~~~G~riG~~~~~~------~~~~~~~~~~~~~t~-~-~~~~~~aa~aal~~~~~---~~~~~~~~~~~~~~ 332 (439)
T 3dxv_A 266 L--VLGKGLGGGLPLSAVIAPA------EILDCASAFAMQTLH-G-NPISAAAGLAVLETIDR---DDLPAMAERKGRLL 332 (439)
T ss_dssp E--EECGGGGTTSCCEEEEEEH------HHHTSCSSSSCCTTT-T-CHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHH
T ss_pred E--EEcchhcCCcceEEEEECH------HHHhhhcCCCcCCCc-c-cHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHH
Confidence 6 678998 567889999987 676666543222222 2 22223333335554432 34566677777777
Q ss_pred HHHHHhC----C-cEEecCCCcceeEEEEe
Q 014724 387 ASRLVEL----G-YKLVSGGSDNHLVLVDL 411 (419)
Q Consensus 387 ~~~L~~~----G-~~v~~~~t~~hlv~vd~ 411 (419)
.+.|.+. + +.... ....++++++
T Consensus 333 ~~~l~~~~~~~~~~~~~~--~~g~~~~~~~ 360 (439)
T 3dxv_A 333 RDGLSELAKRHPLIGDIR--GRGLACGMEL 360 (439)
T ss_dssp HHHHHHHHHHCTTEEEEE--EETTEEEEEE
T ss_pred HHHHHHHHHhCCCeEEEE--EEEEEEEEEE
Confidence 7777653 2 22222 2345667766
No 210
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.68 E-value=5e-15 Score=147.66 Aligned_cols=267 Identities=15% Similarity=0.116 Sum_probs=155.0
Q ss_pred ccccccc--CCC---ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChH
Q 014724 104 SLELIAS--ENF---TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS 178 (419)
Q Consensus 104 ~i~L~~s--en~---~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt 178 (419)
.|++.++ .++ .+|.|++++.+.+.. +..++. .+ ..+...+ +++++++++|.+. .++++||+
T Consensus 38 ~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~-~~~~~~--~~--~~~~~~~----l~~~la~~~~~~~-----v~~~~gg~ 103 (395)
T 3nx3_A 38 YLDFSSGIGVCALGYNHAKFNAKIKAQVDK-LLHTSN--LY--YNENIAA----AAKNLAKASALER-----VFFTNSGT 103 (395)
T ss_dssp EEESSHHHHTCTTCBSCHHHHHHHHHHHTT-CSCCCT--TS--BCHHHHH----HHHHHHHHHTCSE-----EEEESSHH
T ss_pred EEECCCcHHhccCCCCCHHHHHHHHHHHHh-cccccc--cc--CCHHHHH----HHHHHHHhcCCCe-----EEEeCCHH
Confidence 4566554 333 479999999888753 222221 11 2232333 4477888888432 36677889
Q ss_pred HHHHHHHHHcc-------CCCCEEEEeCCCCCccccCccccccccccccc----------cccEEEecccCCCCCCCCHH
Q 014724 179 PANFEVYTAIL-------KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS----------IYFESMPYRLDESTGLVDYD 241 (419)
Q Consensus 179 ~A~~~~~~all-------~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g----------~~~~~v~~~~~~~~~~iD~d 241 (419)
+|+..++.++. .++|+|++.++.+.+..... ....+ ...+...++ ..|++
T Consensus 104 ea~~~al~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~ 170 (395)
T 3nx3_A 104 ESIEGAMKTARKYAFNKGVKGGQFIAFKHSFHGRTLGA-------LSLTANEKYQKPFKPLISGVKFAK------YNDIS 170 (395)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTCEEEEETTCCCCSSHHH-------HTTCCCHHHHGGGCSCCSCEEEEC------TTCHH
T ss_pred HHHHHHHHHHHHHhhccCCCCCEEEEEcCCcCCCCHHH-------HhhcCCcccccccCCCCCCcEEeC------CCCHH
Confidence 99999988775 45899999998875542110 01111 001111211 13899
Q ss_pred HHHHHhhhcCCeEEEEcCCCCC--CcCC----hHHHHHHHHHhCCEEEEeccccccccccCCcC--CCCC-CCcEEEeCC
Q 014724 242 MLEKTAILFRPKLIIAGASAYP--RDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTT 312 (419)
Q Consensus 242 ~Le~~l~~~~pklIi~~~s~~p--~~~d----l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~--~~~~-~~Div~~S~ 312 (419)
+|++++++ ++++|++..++++ ...+ +++|+++|++||++||+|++|. |+...+... ..++ ..|+++ +
T Consensus 171 ~l~~~l~~-~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~-~~g~~g~~~~~~~~~~~~d~~t--~ 246 (395)
T 3nx3_A 171 SVEKLVNE-KTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQC-GMGRSGKFFAYEHAQILPDIMT--S 246 (395)
T ss_dssp HHHTTCCT-TEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSGGGGGTCCCSEEE--E
T ss_pred HHHHhccC-CeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEeccc-CCCcCCcchhHHhcCCCCCEEE--e
Confidence 99999863 6788887764433 2333 8999999999999999999974 442222110 1111 356664 5
Q ss_pred CCcC-CCCCeeEEEEeCCCcchhhH-HHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHH
Q 014724 313 HKSL-RGPRGGMIFFKKDPVLGVEL-ESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRL 390 (419)
Q Consensus 313 hK~l-~GprgG~i~~~~~~~~~~~l-~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L 390 (419)
+|++ .|++.|++++++ ++ .+.+.........+++ ....++...+++.+.. +.+.+++.++.+++.+.|
T Consensus 247 sK~~~~G~~~G~~~~~~------~~~~~~~~~~~~~~~~~~~-~~~~~aa~aal~~~~~---~~~~~~~~~~~~~~~~~l 316 (395)
T 3nx3_A 247 AKALGCGLSVGAFVINQ------KVASNSLEAGDHGSTYGGN-PLVCAGVNAVFEIFKE---EKILENVNKLTPYLEQSL 316 (395)
T ss_dssp CGGGTTTSCCEEEEECH------HHHHHHSCTTCCSSCBSCC-HHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHH
T ss_pred cccccCCCceEEEEEch------hhhhhhcCCcccCCCCCCC-HHHHHHHHHHHHHHHh---hHHHHHHHHHHHHHHHHH
Confidence 6988 567889999887 56 6666543322223232 2233333345654432 234555566666666666
Q ss_pred Hh----CC-cEEecCCCcceeEEEEeCC
Q 014724 391 VE----LG-YKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 391 ~~----~G-~~v~~~~t~~hlv~vd~~~ 413 (419)
.+ .+ +.... ...+++++++..
T Consensus 317 ~~~~~~~~~~~~~~--~~g~~~~~~~~~ 342 (395)
T 3nx3_A 317 DELINEFDFCKKRK--GLGFMQGLSLDK 342 (395)
T ss_dssp HHHHHHCTTEEEEE--EETTEEEEEECT
T ss_pred HHHHHhCCCeEEEE--eEEEEEEEEeCC
Confidence 54 22 32222 234678888754
No 211
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.66 E-value=1e-14 Score=147.46 Aligned_cols=271 Identities=14% Similarity=0.079 Sum_probs=153.5
Q ss_pred hcccccccC--C---CChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCCh
Q 014724 103 KSLELIASE--N---FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG 177 (419)
Q Consensus 103 ~~i~L~~se--n---~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sG 177 (419)
..|++.++. + +.+|.|++|+.+.+......+|+. +...+ .+++++++++ +.+ ..++++||
T Consensus 56 ~ylD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~-------~~~~~----l~~~la~~~~-~~~---~v~~~~sG 120 (434)
T 3l44_A 56 KYIDYLAAYGPIITGHAHPHITKAITTAAENGVLYGTPT-------ALEVK----FAKMLKEAMP-ALD---KVRFVNSG 120 (434)
T ss_dssp EEEECCGGGTTCSSCBTCHHHHHHHHHHHHHCSCCSSCC-------HHHHH----HHHHHHHHCT-TCS---EEEEESSH
T ss_pred EEEECCCchhccccCCCCHHHHHHHHHHHHhCcCCCCCC-------HHHHH----HHHHHHHhCC-CCC---EEEEeCch
Confidence 345555443 2 248999999988876532222321 22223 3467788886 332 23566678
Q ss_pred HHHHHHHHHHccC--CCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCC-------------CCHHH
Q 014724 178 SPANFEVYTAILK--PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGL-------------VDYDM 242 (419)
Q Consensus 178 t~A~~~~~~all~--pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~-------------iD~d~ 242 (419)
++|++.++..+.. ++|+|++.++.+.+..... +...|.......++. ..+. .|+++
T Consensus 121 sea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~-------~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~ 191 (434)
T 3l44_A 121 TEAVMTTIRVARAYTGRTKIMKFAGCYHGHSDLV-------LVAAGSGPSTLGTPD--SAGVPQSIAQEVITVPFNNVET 191 (434)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEETTCCCCSSGGG-------GBC-------CCCBS--STTCCHHHHTTEEEECTTCHHH
T ss_pred HHHHHHHHHHHHHhhCCCEEEEEcCccCCCcHHH-------HhhcCCcccccCCCC--cCCCCCcCCCceEecCcccHHH
Confidence 9999999987754 7899999988875543211 111221111111110 0011 28999
Q ss_pred HHHHhhhc--CCeEEEEcCCCCC--CcCC----hHHHHHHHHHhCCEEEEeccccccccccCCcC--CCCC-CCcEEEeC
Q 014724 243 LEKTAILF--RPKLIIAGASAYP--RDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTT 311 (419)
Q Consensus 243 Le~~l~~~--~pklIi~~~s~~p--~~~d----l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~--~~~~-~~Div~~S 311 (419)
|+++++++ ++++|+++..+++ ...+ +++|+++|++||++||+|++| .|+ ..+... ..+. ..|++ |
T Consensus 192 le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~-~g~-~~g~~~~~~~~~~~~di~--t 267 (434)
T 3l44_A 192 LKEALDKWGHEVAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVI-TAF-RFMYGGAQDLLGVTPDLT--A 267 (434)
T ss_dssp HHHHHHHHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTT-TTT-TSSSSCHHHHHTCCCSEE--E
T ss_pred HHHHHHhCCCCEEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccc-cce-eccccHHHHHcCCCCCee--e
Confidence 99998752 4567777654432 2344 899999999999999999997 454 322110 0011 34665 4
Q ss_pred CCCcC-CCCCeeEEEEeCCCcchhhHHHHhhhc--c-cCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHH
Q 014724 312 THKSL-RGPRGGMIFFKKDPVLGVELESAINNA--V-FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALA 387 (419)
Q Consensus 312 ~hK~l-~GprgG~i~~~~~~~~~~~l~~~i~~~--~-~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~ 387 (419)
++|+| +|+|.|++++++ ++.+.+... . ..... +.+....++...+++.+.+ +.+.+++.++.+++.
T Consensus 268 ~sK~~~~G~~iG~~~~~~------~i~~~~~~~~~~~~~~t~-~~~~~a~aaa~aal~~~~~---~~~~~~~~~~~~~l~ 337 (434)
T 3l44_A 268 LGKVIGGGLPIGAYGGKK------EIMEQVAPLGPAYQAGTM-AGNPASMASGIACLEVLQQ---EGLYEKLDELGATLE 337 (434)
T ss_dssp EEGGGGTTSSCEEEEECH------HHHTTBTTTSSBCCCCTT-TTCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHH
T ss_pred hhhhhcCCcCeeeEEEcH------HHHHhhccCCCcccCCCC-CcCHHHHHHHHHHHHHHHc---ccHHHHHHHHHHHHH
Confidence 66988 567889998887 676666542 1 11112 2223333333445665543 345566666777777
Q ss_pred HHHHh----CCcEEecCCCcceeEEEEeC
Q 014724 388 SRLVE----LGYKLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 388 ~~L~~----~G~~v~~~~t~~hlv~vd~~ 412 (419)
+.|++ .++.... .....++++++.
T Consensus 338 ~~L~~~~~~~~~~~~~-~~~g~~~~~~~~ 365 (434)
T 3l44_A 338 KGILEQAAKHNIDITL-NRLKGALTVYFT 365 (434)
T ss_dssp HHHHHHHHHTTCCEEE-EEETTEEEEEES
T ss_pred HHHHHHHHhCCCCEEE-EeeccEEEEEEe
Confidence 77765 3442111 123456777763
No 212
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.66 E-value=6.8e-15 Score=148.85 Aligned_cols=273 Identities=17% Similarity=0.151 Sum_probs=157.6
Q ss_pred hcccccccC--C---CChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCCh
Q 014724 103 KSLELIASE--N---FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG 177 (419)
Q Consensus 103 ~~i~L~~se--n---~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sG 177 (419)
..|++..+. + +.+|.|++++.+.+.+....+++ .+ +...++++++++++ ..+ ..++++||
T Consensus 57 ~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~~~~~~~~-------~~----~~~~l~~~la~~~~-~~~---~v~~~~sg 121 (434)
T 2epj_A 57 RIVDLVLAYGPLILGHKHPRVLEAVEEALARGWLYGAP-------GE----AEVLLAEKILGYVK-RGG---MIRFVNSG 121 (434)
T ss_dssp EEEESSGGGTTCTTCBTCHHHHHHHHHHHHTCSCCSSC-------CH----HHHHHHHHHHHHHC-TTC---EEEEESSH
T ss_pred EEEEcccchhcccCCCCCHHHHHHHHHHHHhCCCCCCC-------CH----HHHHHHHHHHHhCC-CCC---EEEEeCCH
Confidence 346665553 2 25899999999888652211111 12 22234577788884 222 23566778
Q ss_pred HHHHHHHHHHc--cCCCCEEEEeCCCCCccccCcccccccc-------ccccccc----cEEEecccCCCCCCCCHHHHH
Q 014724 178 SPANFEVYTAI--LKPHDRIMGLDLPHGGHLSHGFMTPKRR-------VSGTSIY----FESMPYRLDESTGLVDYDMLE 244 (419)
Q Consensus 178 t~A~~~~~~al--l~pGD~Vl~~~~~~~g~~s~~~~~~~~~-------i~~~g~~----~~~v~~~~~~~~~~iD~d~Le 244 (419)
++|+..++.+. +.++|+|++.++.|.++..... ..... ....|.. .+.++++. .|+++|+
T Consensus 122 seA~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~-~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~------~d~~~le 194 (434)
T 2epj_A 122 TEATMTAIRLARGYTGRDLILKFDGCYHGSHDAVL-VAAGSAAAHYGVPTSAGVPEAVARLTLVTPY------NDVEALE 194 (434)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEEETCCCCSSGGGS-EECC------CEESSTTCCHHHHTTEEEEET------TCHHHHH
T ss_pred HHHHHHHHHHHHHhhCCCeEEEEcCCcCCCCHHHH-HhcCCCccccCCCCCCCCCCcccCceEecCC------CCHHHHH
Confidence 99999998762 3346788888887655321100 00000 0001210 01222221 4899999
Q ss_pred HHhhh--cCCeEEEEcCCCC--CCcCC----hHHHHHHHHHhCCEEEEeccccccccccCCcC--CCCC-CCcEEEeCCC
Q 014724 245 KTAIL--FRPKLIIAGASAY--PRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTH 313 (419)
Q Consensus 245 ~~l~~--~~pklIi~~~s~~--p~~~d----l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~--~~~~-~~Div~~S~h 313 (419)
+.+++ .++++|+++..++ +...+ +++|+++|++||++||+|++|. |+ ..+... ..++ ..|++ |++
T Consensus 195 ~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~-~~g~~~~~~~~~~~~di~--s~s 270 (434)
T 2epj_A 195 RVFAEYGDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVT-GF-RLGLEGAQGYFNIEGDII--VLG 270 (434)
T ss_dssp HHHHHHGGGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTT-TT-TSSTTHHHHHHTCCCSEE--EEE
T ss_pred HHHHhCCCCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchh-ce-eCCcchhhHHhCCCCCee--eec
Confidence 99875 2567787765433 34456 8999999999999999999986 65 222100 0011 35775 567
Q ss_pred CcCC-CCCeeEEEEeCCCcchhhHHHHhhhcc---cCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHH
Q 014724 314 KSLR-GPRGGMIFFKKDPVLGVELESAINNAV---FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASR 389 (419)
Q Consensus 314 K~l~-GprgG~i~~~~~~~~~~~l~~~i~~~~---~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~ 389 (419)
|+|+ |.++|++++++ ++.+.+.... ...+.+ .+....++...+++.+.+ +.+.+++.++++++.+.
T Consensus 271 K~l~~G~~~G~v~~~~------~~~~~l~~~~~~~~~~t~~-~~~~~~aa~~a~l~~~~~---~~~~~~~~~~~~~l~~~ 340 (434)
T 2epj_A 271 KIIGGGFPVGAVAGSR------EVMSLLTPQGKVFNAGTFN-AHPITMAAGLATLKALEE---EPVYSVSREAAKALEEA 340 (434)
T ss_dssp GGGGTTSSCEEEEECH------HHHTTBTTTSSBCCCCTTT-TCHHHHHHHHHHHHHHHH---SCHHHHHHHHHHHHHHH
T ss_pred chhcCCcceeeeeecH------HHHHhhccCCCcccCCCCC-cCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHH
Confidence 9984 56899999987 6666654311 111111 223333444445655432 34567777788888888
Q ss_pred HHhC----CcEE-ecCCCcceeEEEEeCC
Q 014724 390 LVEL----GYKL-VSGGSDNHLVLVDLRP 413 (419)
Q Consensus 390 L~~~----G~~v-~~~~t~~hlv~vd~~~ 413 (419)
|++. |+.. +. ....++++++..
T Consensus 341 L~~~~~~~~~~~~~~--~~g~~~~i~~~~ 367 (434)
T 2epj_A 341 ASEVLDRTGLPYTIN--RVESMMQLFIGV 367 (434)
T ss_dssp HHHHHHHHTCCEEEE--EETTEEEEEETC
T ss_pred HHHHHhhCCCcEEEE--EeeeEEEEEEeC
Confidence 8764 6532 22 234578888754
No 213
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.65 E-value=3.1e-14 Score=143.58 Aligned_cols=267 Identities=15% Similarity=0.079 Sum_probs=153.3
Q ss_pred hcccccccC--CC---ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCCh
Q 014724 103 KSLELIASE--NF---TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG 177 (419)
Q Consensus 103 ~~i~L~~se--n~---~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sG 177 (419)
..|++..+. +. .+|.|++|+.+.+.... .+. + ..+ .....+++++++++ +.+ ..++++||
T Consensus 53 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~--~~~----~-~~~----~~~~la~~l~~~~~-~~~---~v~~~~gg 117 (427)
T 3fq8_A 53 RYIDYVGTWGPAICGHAHPEVIEALKVAMEKGT--SFG----A-PCA----LENVLAEMVNDAVP-SIE---MVRFVNSG 117 (427)
T ss_dssp EEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCS--CCS----S-CCH----HHHHHHHHHHHHST-TCS---EEEEESSH
T ss_pred EEEECCCchhhhccCCCCHHHHHHHHHHHHhCC--CcC----C-CCH----HHHHHHHHHHHhCC-CCC---EEEEeCCH
Confidence 346665543 22 48999999988875421 111 1 112 22334577888887 332 23566778
Q ss_pred HHHHHHHHHHcc--CCCCEEEEeCCCCCccccCccccccccccccccccE-----------------EEecccCCCCCCC
Q 014724 178 SPANFEVYTAIL--KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFE-----------------SMPYRLDESTGLV 238 (419)
Q Consensus 178 t~A~~~~~~all--~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~-----------------~v~~~~~~~~~~i 238 (419)
++|++.++.... ..+|+|++.++.+.+..... ....+.... +..++. .
T Consensus 118 sea~~~al~~a~~~~~~~~vi~~~~~yhg~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~ 184 (427)
T 3fq8_A 118 TEACMAVLRIMRAYTGRDKIIKFEGCYHGHADMF-------LVKAGSGVATLGLPSSPGVPKKTTANTLTTPY------N 184 (427)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEEETCCCCSCGGG-------CSSCCTHHHHHTCCSCSSSCHHHHTTEEEEET------T
T ss_pred HHHHHHHHHHHHHhhCCCEEEEECCCcCCCCHHH-------HHhcCCcccccCCCCCCCCCCcccCceeecCC------C
Confidence 999998884331 24578998888765532111 111111111 111111 1
Q ss_pred CHHHHHHHhhhc--CCeEEEEcCCCCC--CcCC----hHHHHHHHHHhCCEEEEeccccccccccCCcC--CCCC-CCcE
Q 014724 239 DYDMLEKTAILF--RPKLIIAGASAYP--RDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDV 307 (419)
Q Consensus 239 D~d~Le~~l~~~--~pklIi~~~s~~p--~~~d----l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~--~~~~-~~Di 307 (419)
|+++|+++++++ ++++|+++.++++ ...+ +++|+++|++||++||+|++|. |+ ..+... ..+. ..|+
T Consensus 185 d~~~le~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~-g~-~~g~~~~~~~~~~~~di 262 (427)
T 3fq8_A 185 DLEAVKALFAENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVIT-GF-RIAYGGVQEKFGVTPDL 262 (427)
T ss_dssp CHHHHHHHHHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTT-BT-TTBTTHHHHHTTCCCSE
T ss_pred CHHHHHHHHHhCCCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-cc-ccCcchhhHhcCCCCCh
Confidence 899999999764 5678888765433 3445 8999999999999999999974 65 322110 0111 3466
Q ss_pred EEeCCCCcC-CCCCeeEEEEeCCCcchhhHHHHhhhcc---cCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHH
Q 014724 308 VTTTTHKSL-RGPRGGMIFFKKDPVLGVELESAINNAV---FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNC 383 (419)
Q Consensus 308 v~~S~hK~l-~GprgG~i~~~~~~~~~~~l~~~i~~~~---~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~ 383 (419)
+ |++|+| +|.|.|++++++ ++.+.+.... ..... +.+....++...+++.+.++ .+.+++.++.
T Consensus 263 ~--t~sK~~~~G~~~G~~~~~~------~~~~~~~~~~~~~~~~t~-~~~~~~~aa~~aal~~~~~~---~~~~~~~~~~ 330 (427)
T 3fq8_A 263 T--TLGKIIGGGLPVGAYGGKR------EIMQLVAPAGPMYQAGTL-SGNPLAMTAGIKTLELLRQP---GTYEYLDQIT 330 (427)
T ss_dssp E--EECGGGGTTSSCEEEEECH------HHHTTBTTTSSBCCCCTT-TTCHHHHHHHHHHHHHHTST---THHHHHHHHH
T ss_pred h--hhhhhhhCCcceEEEEEcH------HHHHhhccCCCccccCCC-CcCHHHHHHHHHHHHHHHhc---CHHHHHHHHH
Confidence 5 456998 567899998887 6766665321 11111 12333344444466655432 4456666677
Q ss_pred HHHHHHHHh----CCcEEecCCCcceeEEEEeC
Q 014724 384 RALASRLVE----LGYKLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 384 ~~l~~~L~~----~G~~v~~~~t~~hlv~vd~~ 412 (419)
+++.+.|++ .++..... ....++++++.
T Consensus 331 ~~~~~~l~~~~~~~~~~~~~~-~~g~~~~~~~~ 362 (427)
T 3fq8_A 331 KRLSDGLLAIAQETGHAACGG-QVSGMFGFFFT 362 (427)
T ss_dssp HHHHHHHHHHHHHTTCCCEEE-EETTEEEEESS
T ss_pred HHHHHHHHHHHHhCCCCeEEE-EeeeEEEEEEe
Confidence 777777765 34322211 23346677764
No 214
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.65 E-value=1.2e-14 Score=146.82 Aligned_cols=271 Identities=13% Similarity=0.029 Sum_probs=153.1
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHcc--CC
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--KP 191 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all--~p 191 (419)
.+|.|++++.+.+... . +....| . .+... ..+++++++++.+.+ + .+++++|++|+..++.++. ..
T Consensus 60 ~~p~v~~a~~~~~~~~-~--~~~~~~-~-~~~~~----~l~~~la~~~~~~~~-~--v~~~~gg~ea~~~a~~~~~~~~~ 127 (433)
T 1zod_A 60 CHPEIVSVIGEYAGKL-D--HLFSEM-L-SRPVV----DLATRLANITPPGLD-R--ALLLSTGAESNEAAIRMAKLVTG 127 (433)
T ss_dssp TCHHHHHHHHHHHHHC-C--CCCTTC-C-CHHHH----HHHHHHHHHSCTTCC-E--EEEESCHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHhC-c--cccccc-C-CHHHH----HHHHHHHHhCCCCcC-E--EEEeCchHHHHHHHHHHHHHhhC
Confidence 4899999998887542 1 111111 1 12222 334678888987653 2 2555678999999987653 24
Q ss_pred CCEEEEeCCCCCccccCcccc----ccccccccccccEEEecccCC-C--------CCCCCHHHHHHHhhh---cCCeEE
Q 014724 192 HDRIMGLDLPHGGHLSHGFMT----PKRRVSGTSIYFESMPYRLDE-S--------TGLVDYDMLEKTAIL---FRPKLI 255 (419)
Q Consensus 192 GD~Vl~~~~~~~g~~s~~~~~----~~~~i~~~g~~~~~v~~~~~~-~--------~~~iD~d~Le~~l~~---~~pklI 255 (419)
+|+|++.++.+.+........ .+........++..++++... . .+.+|+++|++.+++ .++++|
T Consensus 128 ~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~~v 207 (433)
T 1zod_A 128 KYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQSSGNLAAF 207 (433)
T ss_dssp CCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHHCCSCEEEE
T ss_pred CCeEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHHHHHHHhcCCCCeEEE
Confidence 589999998765432100000 000000001123444432110 0 012579999999875 356777
Q ss_pred EEcCCCCC--CcCC----hHHHHHHHHHhCCEEEEeccccccccccCCcCCCC---C-CCcEEEeCCCCcC-CCCCeeEE
Q 014724 256 IAGASAYP--RDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K-YCDVVTTTTHKSL-RGPRGGMI 324 (419)
Q Consensus 256 i~~~s~~p--~~~d----l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~---~-~~Div~~S~hK~l-~GprgG~i 324 (419)
+++..+++ ...+ +++|+++|++||++||+|++|. |+...+.. ..+ . ..|++ |++|+| .|.|.|++
T Consensus 208 i~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~-~~g~~g~~-~~~~~~~~~~di~--s~sK~~~~G~~ig~~ 283 (433)
T 1zod_A 208 IAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQT-GVGRTGTM-FACQRDGVTPDIL--TLSKTLGAGLPLAAI 283 (433)
T ss_dssp EECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSS-STHHHHTCCCSEE--EECHHHHTTSSCEEE
T ss_pred EEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-CCCcCchH-hHHhhcCCCCCEE--EecccccCCCCeeEE
Confidence 77654343 2233 8999999999999999999975 44322211 111 1 35665 577998 46788999
Q ss_pred EEeCCCcchhhHHHHhhhcccC--CCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC----C-cEE
Q 014724 325 FFKKDPVLGVELESAINNAVFP--GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL----G-YKL 397 (419)
Q Consensus 325 ~~~~~~~~~~~l~~~i~~~~~~--~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~----G-~~v 397 (419)
++++ ++.+.+....+. ...++ +....++...+++.+.++ .+.+++.++++++.+.|++. + +..
T Consensus 284 ~~~~------~~~~~~~~~~~~~~~t~~~-~~~~~~a~~aal~~~~~~---~~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 353 (433)
T 1zod_A 284 VTSA------AIEERAHELGYLFYTTHVS-DPLPAAVGLRVLDVVQRD---GLVARANVMGDRLRRGLLDLMERFDCIGD 353 (433)
T ss_dssp EECH------HHHHHHHHTTCCCCCTTTT-CHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHHHCTTEEE
T ss_pred EEhH------HHHHhhccCCCCCCCCCCc-CHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHhCCCeEE
Confidence 9987 676666542211 22222 233333434466554322 34667777788888888763 2 222
Q ss_pred ecCCCcceeEEEEeC
Q 014724 398 VSGGSDNHLVLVDLR 412 (419)
Q Consensus 398 ~~~~t~~hlv~vd~~ 412 (419)
+. ....++++++.
T Consensus 354 ~~--~~g~~~~i~~~ 366 (433)
T 1zod_A 354 VR--GRGLLLGVEIV 366 (433)
T ss_dssp EE--EETTEEEEEEE
T ss_pred EE--EEEEEEEEEEe
Confidence 22 23456788774
No 215
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.64 E-value=7e-14 Score=142.21 Aligned_cols=262 Identities=13% Similarity=0.023 Sum_probs=148.3
Q ss_pred ccccccc--CCC---ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChH
Q 014724 104 SLELIAS--ENF---TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS 178 (419)
Q Consensus 104 ~i~L~~s--en~---~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt 178 (419)
.|++..+ .++ .+|.|++|+.+.+.. ... .+ . ....+ ....++++++++++.+.+ .++++||+
T Consensus 51 ~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~-~~~-~~-~--~~~~~----~~~~la~~l~~~~~~~~~----v~~~~ggs 117 (452)
T 3n5m_A 51 YLDGMSGLWCVNSGYGRKELAEAAYKQLQT-LSY-FP-M--SQSHE----PAIKLAEKLNEWLGGEYV----IFFSNSGS 117 (452)
T ss_dssp EEETTHHHHTCTTCBCCHHHHHHHHHHHTT-CCC-CC-T--TSEEH----HHHHHHHHHHHHHTSCEE----EEEESSHH
T ss_pred EEECCcchhhccCCCCCHHHHHHHHHHHHh-cCC-cc-c--ccCCH----HHHHHHHHHHHhCCCCce----EEEeCchH
Confidence 4566554 222 479999999988753 211 11 1 11222 223345778888886653 25667789
Q ss_pred HHHHHHHHHcc-----C---CCCEEEEeCCCCCccccCcccccc-ccc-----cccccccEEEecccCCCCCCCC-----
Q 014724 179 PANFEVYTAIL-----K---PHDRIMGLDLPHGGHLSHGFMTPK-RRV-----SGTSIYFESMPYRLDESTGLVD----- 239 (419)
Q Consensus 179 ~A~~~~~~all-----~---pGD~Vl~~~~~~~g~~s~~~~~~~-~~i-----~~~g~~~~~v~~~~~~~~~~iD----- 239 (419)
+|++.++..+. . ++|+|++.++.+.+...... ... ... ......+..++.+.......-|
T Consensus 118 eA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (452)
T 3n5m_A 118 EANETAFKIARQYYAQKGEPHRYKFMSRYRGYHGNTMATM-AATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIY 196 (452)
T ss_dssp HHHHHHHHHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHH-HSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGG
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHH-hcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhH
Confidence 99999998887 5 78999999988755421000 000 000 0000011222221100000112
Q ss_pred ----HHHHHHHhh---hcCCeEEEEcCC-CC-CCcCC----hHHHHHHHHHhCCEEEEeccccccccccCCcC--CCCC-
Q 014724 240 ----YDMLEKTAI---LFRPKLIIAGAS-AY-PRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK- 303 (419)
Q Consensus 240 ----~d~Le~~l~---~~~pklIi~~~s-~~-p~~~d----l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~--~~~~- 303 (419)
+++||+.++ ..++++|+++.+ +| +...+ +++|+++|++||++||+|++|. |+...|... ..++
T Consensus 197 ~~~~~~~le~~l~~~~~~~~~~vi~ep~~~n~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-g~g~~g~~~~~~~~~~ 275 (452)
T 3n5m_A 197 DVECVKEVDRVMTWELSETIAAFIMEPIITGGGILMAPQDYMKAVHETCQKHGALLISDEVIC-GFGRTGKAFGFMNYDV 275 (452)
T ss_dssp GCHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSGGGGTTC
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEEccccCCCCeeeCCHHHHHHHHHHHHHcCCEEEEecchh-CCCcccccchhhhcCC
Confidence 899999987 235678888876 34 22333 8999999999999999999974 443222210 1111
Q ss_pred CCcEEEeCCCCcC-CC-CCeeEEEEeCCCcchhhHHHHhhh----cc--cCCCCCCChHHHHHHHHHHHHHhcChHHHHH
Q 014724 304 YCDVVTTTTHKSL-RG-PRGGMIFFKKDPVLGVELESAINN----AV--FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 375 (419)
Q Consensus 304 ~~Div~~S~hK~l-~G-prgG~i~~~~~~~~~~~l~~~i~~----~~--~~~~~g~p~~~~iaala~al~~~~~~~~~~~ 375 (419)
..|+++ ++|++ .| ++.|++++++ ++.+.+.. .. ...+.+++ ....++...+++.+.. +.+
T Consensus 276 ~~di~t--~sK~l~~G~~~ig~~~~~~------~i~~~~~~~~~~~~~~~~~t~~~~-~~~~aaa~aal~~~~~---~~~ 343 (452)
T 3n5m_A 276 KPDIIT--MAKGITSAYLPLSATAVKR------EIYEAFKGKGEYEFFRHINTFGGN-PAACALALKNLEIIEN---ENL 343 (452)
T ss_dssp CCSEEE--ECGGGGTTSSCCEEEEEEH------HHHGGGCSSSTTCSCCCCCSSTTC-HHHHHHHHHHHHHHHH---TTH
T ss_pred CCCEEe--ecccccCCCcceEEEEECH------HHHHHHhhccCCCCccccCCCCCC-HHHHHHHHHHHHHHHh---ccH
Confidence 356665 67988 56 6789999987 67777642 11 11222222 2233333345655432 234
Q ss_pred HHHHHHHHHHHHHHHHh
Q 014724 376 QNKVVSNCRALASRLVE 392 (419)
Q Consensus 376 ~~~v~~n~~~l~~~L~~ 392 (419)
.+++.++.+++.+.|++
T Consensus 344 ~~~~~~~~~~l~~~L~~ 360 (452)
T 3n5m_A 344 IERSAQMGSLLLEQLKE 360 (452)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 56666777777777765
No 216
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.64 E-value=1.3e-14 Score=146.34 Aligned_cols=272 Identities=16% Similarity=0.091 Sum_probs=156.6
Q ss_pred cccccccC--C---CChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChH
Q 014724 104 SLELIASE--N---FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS 178 (419)
Q Consensus 104 ~i~L~~se--n---~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt 178 (419)
.|++..+. + +.+|.|++|+.+.+......+++ . ++...++++++++++ +.+ + .++++||+
T Consensus 54 ~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~-------~----~~~~~l~~~l~~~~~-~~~-~--v~~~~~g~ 118 (424)
T 2e7u_A 54 YLDYVMSWGPLILGHAHPKVLARVRETLERGLTFGAP-------S----PLEVALAKKVKRAYP-FVD-L--VRFVNSGT 118 (424)
T ss_dssp EEESSGGGTTCTTCBTCHHHHHHHHHHHHTCSCCSSC-------C----HHHHHHHHHHHHHCT-TCC-E--EEEESSHH
T ss_pred EEEccccccccccCCCCHHHHHHHHHHHHhCCCCCCC-------C----HHHHHHHHHHHHhCC-CCC-E--EEEeCCHH
Confidence 46666553 2 35899999999888642111111 1 233344577888885 332 1 25666789
Q ss_pred HHHHHHHHH---ccCCCCEEEEeCCCCCccccCccccccc---c---ccccccc----cEEEecccCCCCCCCCHHHHHH
Q 014724 179 PANFEVYTA---ILKPHDRIMGLDLPHGGHLSHGFMTPKR---R---VSGTSIY----FESMPYRLDESTGLVDYDMLEK 245 (419)
Q Consensus 179 ~A~~~~~~a---ll~pGD~Vl~~~~~~~g~~s~~~~~~~~---~---i~~~g~~----~~~v~~~~~~~~~~iD~d~Le~ 245 (419)
+|+..++.. +.+ +|+|++.++.+.++.......... . ....|.. ...+.++ ..|+++|++
T Consensus 119 ea~~~al~~ar~~~~-~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~------~~d~~~le~ 191 (424)
T 2e7u_A 119 EATMSALRLARGYTG-RPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLE------YNDPEGLRE 191 (424)
T ss_dssp HHHHHHHHHHHHHHC-CCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEEC------TTCHHHHHH
T ss_pred HHHHHHHHHHHHhhC-CCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCC------CCCHHHHHH
Confidence 999988875 444 578888888775542111000000 0 0001110 0122222 148999999
Q ss_pred Hhhh--cCCeEEEEcCCC--CCCcCC----hHHHHHHHHHhCCEEEEeccccccccccCCcC--CCCC-CCcEEEeCCCC
Q 014724 246 TAIL--FRPKLIIAGASA--YPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHK 314 (419)
Q Consensus 246 ~l~~--~~pklIi~~~s~--~p~~~d----l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~--~~~~-~~Div~~S~hK 314 (419)
.+++ .++++|+++..+ .+...+ +++|+++ ++||++||+|++|. |+ ..+... ..+. ..|++ |++|
T Consensus 192 ~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~-g~-~~g~~~~~~~~~~~~di~--s~sK 266 (424)
T 2e7u_A 192 VLKRRGEEIAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMT-GF-RLAFGGATELLGLKPDLV--TLGK 266 (424)
T ss_dssp HHHHHGGGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTT-TT-TSSTTHHHHHHTCCCSEE--EECG
T ss_pred HHHhCCCCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcc-cc-ccchhHHHHHhCCCcchh--hhhh
Confidence 9874 356677775432 233455 8999999 99999999999985 65 222110 0011 35765 6789
Q ss_pred cCC-CCCeeEEEEeCCCcchhhHHHHhhhcc---cCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHH
Q 014724 315 SLR-GPRGGMIFFKKDPVLGVELESAINNAV---FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRL 390 (419)
Q Consensus 315 ~l~-GprgG~i~~~~~~~~~~~l~~~i~~~~---~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L 390 (419)
+|+ |.++|++++++ ++.+.+.... ...+.+ .+....++...+++.+.+ .+++.+++.++++++.+.|
T Consensus 267 ~l~~G~~~G~~~~~~------~~~~~~~~~~~~~~~~t~~-~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~~l~~~L 337 (424)
T 2e7u_A 267 ILGGGLPAAAYAGRR------EIMEKVAPLGPVYQAGTLS-GNPLAMAAGLATLELLEE--NPGYYAYLEDLGARLEAGL 337 (424)
T ss_dssp GGGTTSSCEEEEECH------HHHTTBTTTSSBCCCCTTC-SCHHHHHHHHHHHHHHHH--CTHHHHHHHHHHHHHHHHH
T ss_pred hhhCCcceEEEEEcH------HHHhhhcccCCcccCCCCC-CCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHH
Confidence 984 56899999987 6766665411 111112 222333333445655432 1446777888888888888
Q ss_pred HhC----CcEE-ecCCCcceeEEEEeCC
Q 014724 391 VEL----GYKL-VSGGSDNHLVLVDLRP 413 (419)
Q Consensus 391 ~~~----G~~v-~~~~t~~hlv~vd~~~ 413 (419)
++. |+.. +. ....++|+++..
T Consensus 338 ~~~~~~~~~~~~~~--~~g~~~~i~~~~ 363 (424)
T 2e7u_A 338 KEVLKEKGLPHTVN--RVGSMITVFFTE 363 (424)
T ss_dssp HHHHHHTTCCCEEE--EETTEEEEESSS
T ss_pred HHHHHhCCCceEEE--eeceEEEEEEeC
Confidence 763 6532 22 234578998864
No 217
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.64 E-value=1.2e-14 Score=148.57 Aligned_cols=283 Identities=12% Similarity=0.032 Sum_probs=162.2
Q ss_pred hccccccc--CCC---ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCCh
Q 014724 103 KSLELIAS--ENF---TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG 177 (419)
Q Consensus 103 ~~i~L~~s--en~---~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sG 177 (419)
+.|++.++ .+. .+|.|.+|+.+.+.. ......+ ++ ..+... ..+++++++++.+.+ ..++++||
T Consensus 76 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~-~~~~~~~-~~--~~~~~~----~L~e~la~~~~~~~~---~v~~~~sG 144 (457)
T 3tfu_A 76 EVLDAMSSWWTAIHGHGHPALDQALTTQLRV-MNHVMFG-GL--THEPAA----RLAKLLVDITPAGLD---TVFFSDSG 144 (457)
T ss_dssp EEEETTHHHHTCTTCBTCHHHHHHHHHHHHH-CSCCCSS-SE--ECHHHH----HHHHHHHHHSSTTEE---EEEEESSH
T ss_pred EEEECCCcHhhhccCCCCHHHHHHHHHHHHh-ccCcccc-cc--CCHHHH----HHHHHHHHhCCCCcC---EEEEeCcH
Confidence 45666554 222 489999999888754 2211111 11 112222 345788899976653 23566678
Q ss_pred HHHHHHHHHHccC-------CCC-EEEEeCCCCCccccCcccc-c-----cccccccccccEEEecccCCCCCCCCHHHH
Q 014724 178 SPANFEVYTAILK-------PHD-RIMGLDLPHGGHLSHGFMT-P-----KRRVSGTSIYFESMPYRLDESTGLVDYDML 243 (419)
Q Consensus 178 t~A~~~~~~all~-------pGD-~Vl~~~~~~~g~~s~~~~~-~-----~~~i~~~g~~~~~v~~~~~~~~~~iD~d~L 243 (419)
++|++.++..+.. +|+ +|++.++.+.+........ . +.........+..++++.+ .....|+++|
T Consensus 145 seA~~~Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~d~~~l 223 (457)
T 3tfu_A 145 SVSVEVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPR-DYDPAYSAAF 223 (457)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCS-SCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCc-ccCHHHHHHH
Confidence 9999999987764 554 8888888765432100000 0 0000000112233343321 1123589999
Q ss_pred HHHhhh--cCCeEEEEcC-CCCCC--cC----ChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC----CCcEEEe
Q 014724 244 EKTAIL--FRPKLIIAGA-SAYPR--DF----DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----YCDVVTT 310 (419)
Q Consensus 244 e~~l~~--~~pklIi~~~-s~~p~--~~----dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~----~~Div~~ 310 (419)
++++++ .++++|+++. +++++ .. .+++|+++|++||++||+|++| .|+...|.. ..++ ..|++
T Consensus 224 e~~l~~~~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~-~g~gr~G~~-~a~~~~~~~pdii-- 299 (457)
T 3tfu_A 224 EAQLAQHAGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIA-TGFGRTGAL-FAADHAGVSPDIM-- 299 (457)
T ss_dssp HHHHHHHGGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTT-TTTTTTSSS-STHHHHTCCCSEE--
T ss_pred HHHHHhCCCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCc-cCCccccch-hHhHhcCCCceEE--
Confidence 999874 3567888877 55442 22 3899999999999999999995 454333321 1111 45777
Q ss_pred CCCCcCCC--CCeeEEEEeCCCcchhhHHHHhhh---c--ccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHH
Q 014724 311 TTHKSLRG--PRGGMIFFKKDPVLGVELESAINN---A--VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNC 383 (419)
Q Consensus 311 S~hK~l~G--prgG~i~~~~~~~~~~~l~~~i~~---~--~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~ 383 (419)
|++|+++| +|.|++++++ ++.+.+.. . ....+.++ +....++..++|+.+.++ .+.+++.++.
T Consensus 300 t~sK~l~gG~~~lG~v~~~~------~i~~~~~~~~~~~~~~~~t~~~-n~~a~aaa~aaL~~~~~~---~~~~~~~~~~ 369 (457)
T 3tfu_A 300 CVGKALTGGYLSLAATLCTA------DVAHTISAGAAGALMHGPTFMA-NPLACAVSVASVELLLGQ---DWRTRITELA 369 (457)
T ss_dssp EECGGGGTTSSCCEEEEEEH------HHHHHHHHSSSCSCCCCCTTTT-CHHHHHHHHHHHHHHHTS---CHHHHHHHHH
T ss_pred EEChhhhCCCcceEEEEEcH------HHHHHhhccCCCceeEecCCCc-CHHHHHHHHHHHHHHhhh---HHHHHHHHHH
Confidence 66799966 6899999988 67776641 1 11122222 222333333456655433 4567777788
Q ss_pred HHHHHHHHhC----CcEEecCCCcceeEEEEeCC
Q 014724 384 RALASRLVEL----GYKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 384 ~~l~~~L~~~----G~~v~~~~t~~hlv~vd~~~ 413 (419)
+++.+.|+++ ++..+. ....++++++..
T Consensus 370 ~~l~~~L~~l~~~~~v~~vr--~~G~~~~i~l~~ 401 (457)
T 3tfu_A 370 AGLTAGLDTARALPAVTDVR--VCGAIGVIECDR 401 (457)
T ss_dssp HHHHHHHGGGGGSTTEEEEE--ECSSCEEEEESS
T ss_pred HHHHHHHHHHhcCCCeeeee--cCCeEEEEEECC
Confidence 8888888774 232222 234567777743
No 218
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.63 E-value=1.1e-14 Score=148.13 Aligned_cols=271 Identities=13% Similarity=0.055 Sum_probs=152.7
Q ss_pred hcccccccC--C---CChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCCh
Q 014724 103 KSLELIASE--N---FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG 177 (419)
Q Consensus 103 ~~i~L~~se--n---~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sG 177 (419)
..|++..+. + +.+|.|++|+.+.+......++ ..++++.+++++++.++ +.+ + .++++||
T Consensus 58 ~~iD~~~~~~~~~lg~~~~~v~~a~~~~~~~~~~~~~-----------~~~~~~~la~~l~~~~~-~~~-~--v~~~~gg 122 (453)
T 2cy8_A 58 VYLDFFGGHGALVLGHGHPRVNAAIAEALSHGVQYAA-----------SHPLEVRWAERIVAAFP-SIR-K--LRFTGSG 122 (453)
T ss_dssp EEEESCTTTTSCTTCBTCHHHHHHHHHHHTTTCSSCS-----------SCHHHHHHHHHHHHHCT-TCS-E--EEEESCH
T ss_pred EEEECcccHhhcccCCCCHHHHHHHHHHHHhCCCCCC-----------CCHHHHHHHHHHHhhCC-CCC-E--EEEeCCH
Confidence 346665552 2 3589999999988754211111 12455566788888886 332 2 3566778
Q ss_pred HHHHHHHHHH---ccCCCCEEEEeCCCCCccccCcccccccc----ccccccc----cEEEecccCCCCCCCCHHHHHHH
Q 014724 178 SPANFEVYTA---ILKPHDRIMGLDLPHGGHLSHGFMTPKRR----VSGTSIY----FESMPYRLDESTGLVDYDMLEKT 246 (419)
Q Consensus 178 t~A~~~~~~a---ll~pGD~Vl~~~~~~~g~~s~~~~~~~~~----i~~~g~~----~~~v~~~~~~~~~~iD~d~Le~~ 246 (419)
++|+..++.+ +.++ |+|++.++.|.++...... .... ....|.. .....++ ..|+++|++.
T Consensus 123 ~eA~~~al~~ar~~~~~-~~vi~~~~~yhg~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~------~~d~~~le~~ 194 (453)
T 2cy8_A 123 TETTLLALRVARAFTGR-RMILRFEGHYHGWHDFSAS-GYNSHFDGQPAPGVLPETTANTLLIR------PDDIEGMREV 194 (453)
T ss_dssp HHHHHHHHHHHHHHHCC-CEEEEECC-----------------------------CGGGEEEEC------TTCHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCC-CEEEEEcCCcCCCchhhHh-hcCCccCCCcCCCCCccccCceeecC------CCCHHHHHHH
Confidence 9999999887 5554 6788888776554211100 0000 0001110 0111211 1489999999
Q ss_pred hhh--cCCeEEEEcCCCC--CCcCC----hHHHHHHHHHhCCEEEEeccccccccccCCcC--CCCC-CCcEEEeCCCCc
Q 014724 247 AIL--FRPKLIIAGASAY--PRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKS 315 (419)
Q Consensus 247 l~~--~~pklIi~~~s~~--p~~~d----l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~--~~~~-~~Div~~S~hK~ 315 (419)
+++ .++++|+++..++ +...+ +++|+++|++||++||+|++|. |+ ..+... ..++ ..|++ |++|+
T Consensus 195 l~~~~~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~-~~g~~~~~~~~~~~~di~--s~sK~ 270 (453)
T 2cy8_A 195 FANHGSDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVIS-GF-RVGNHGMQALLDVQPDLT--CLAKA 270 (453)
T ss_dssp HHHHGGGEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTT-TT-TTCTTHHHHHHTCCCSEE--EEEGG
T ss_pred HHhcCCCEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcc-cc-ccCchhhhHHhCCCCcEE--EEChh
Confidence 875 2567777765433 33445 8999999999999999999985 66 322110 0011 35766 56799
Q ss_pred CC-CCCeeEEEEeCCCcchhhHHHHhhh---c--ccCCCCCCChHHHHHHHHHHHHH-hcChHHHHHHHHHHHHHHHHHH
Q 014724 316 LR-GPRGGMIFFKKDPVLGVELESAINN---A--VFPGLQGGPHNHTIGGLAVCLKH-AQSPEFKVYQNKVVSNCRALAS 388 (419)
Q Consensus 316 l~-GprgG~i~~~~~~~~~~~l~~~i~~---~--~~~~~~g~p~~~~iaala~al~~-~~~~~~~~~~~~v~~n~~~l~~ 388 (419)
|. |+++|++++++ ++.+.+.. . ....+. +.+....++...+++. + . +.+.+++.++++++.+
T Consensus 271 l~~G~~~G~v~~~~------~~~~~l~~~~~~~~~~~~t~-~~n~~~~aa~~aal~~~~-~---~~~~~~~~~~~~~l~~ 339 (453)
T 2cy8_A 271 SAGGLPGGILGGRE------DVMGVLSRGSDRKVLHQGTF-TGNPITAAAAIAAIDTIL-E---DDVCAKINDLGQFARE 339 (453)
T ss_dssp GGTTSSCEEEEECH------HHHTTSSSCC---------C-CCCHHHHHHHHHHHHHHH-H---TTHHHHHHHHHHHHHH
T ss_pred hhCCcceEEEechH------HHHHHhccccCCCceeCCCC-CCCHHHHHHHHHHHHHHh-h---hhHHHHHHHHHHHHHH
Confidence 95 57899999987 66665543 1 011111 2223333343445655 4 2 2345667777888888
Q ss_pred HHHhC----CcEE-ecCCCcceeEEEEeCC
Q 014724 389 RLVEL----GYKL-VSGGSDNHLVLVDLRP 413 (419)
Q Consensus 389 ~L~~~----G~~v-~~~~t~~hlv~vd~~~ 413 (419)
.|++. ++.. +. ....++|+++..
T Consensus 340 ~L~~~~~~~~~~~~~~--~~g~~~~i~~~~ 367 (453)
T 2cy8_A 340 AMNHLFARKGLNWLAY--GRFSGFHLMPGL 367 (453)
T ss_dssp HHHHHHHHTTCCEEEE--CCTTEEEEEETS
T ss_pred HHHHHHhhCCCcEEEE--EeeeEEEEEEec
Confidence 88663 5432 22 234578888864
No 219
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.63 E-value=1.7e-14 Score=145.79 Aligned_cols=253 Identities=15% Similarity=0.084 Sum_probs=146.7
Q ss_pred hcccccccC--C---CChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCCh
Q 014724 103 KSLELIASE--N---FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG 177 (419)
Q Consensus 103 ~~i~L~~se--n---~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sG 177 (419)
+.|++.++. + ..+|.|++|+.+.+......+|+ ++...+ .+++++++++ ..+ ..++++||
T Consensus 54 ~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~-------~~~~~~----l~~~la~~~~-~~~---~v~~~~~G 118 (429)
T 3k28_A 54 EYIDYVLSWGPLIHGHANDRVVEALKAVAERGTSFGAP-------TEIENK----LAKLVIERVP-SIE---IVRMVNSG 118 (429)
T ss_dssp EEEESCGGGTTCTTCBSCHHHHHHHHHHHHHCSCCSSC-------CHHHHH----HHHHHHHHST-TCS---EEEEESSH
T ss_pred EEEECCCChhhcccCCCCHHHHHHHHHHHhhCcCcCCC-------CHHHHH----HHHHHHHhCC-CCC---EEEEeCCh
Confidence 446665543 2 24899999999887643221222 122223 3467778875 332 23566778
Q ss_pred HHHHHHHHHHccC--CCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCC-------------CCHHH
Q 014724 178 SPANFEVYTAILK--PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGL-------------VDYDM 242 (419)
Q Consensus 178 t~A~~~~~~all~--pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~-------------iD~d~ 242 (419)
++|++.++..+.. ++++|++.++.+.+..... +...|.......++. ..+. -|+++
T Consensus 119 sea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~-------~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~ 189 (429)
T 3k28_A 119 TEATMSALRLARGYTGRNKILKFIGCYHGHGDSL-------LIKAGSGVATLGLPD--SPGVPEGVAKNTITVAYNDLES 189 (429)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEETCCCCSCGGG-------CSSCCTTC-----CC--CTTCCHHHHTTEEEEETTCHHH
T ss_pred HHHHHHHHHHHHHhhCCCEEEEECCCcCCCcHHH-------HHhcCCcccccCCCC--cCCCCCcccCceeecCCCCHHH
Confidence 9999999877654 6789999888765442111 112222111111110 0111 28999
Q ss_pred HHHHhhhc--CCeEEEEcCCCCC--CcCC----hHHHHHHHHHhCCEEEEeccccccccccCCcC--CCCC-CCcEEEeC
Q 014724 243 LEKTAILF--RPKLIIAGASAYP--RDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTT 311 (419)
Q Consensus 243 Le~~l~~~--~pklIi~~~s~~p--~~~d----l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~--~~~~-~~Div~~S 311 (419)
|+++++++ ++++|+++..++. ...+ +++|+++|++||++||+|++| .|+ ..+... ..++ ..|+++
T Consensus 190 le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~-~g~-~~g~~~~~~~~~~~~di~t-- 265 (429)
T 3k28_A 190 VKYAFEQFGDDIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVM-TGF-RVAYNCGQGYYGVTPDLTC-- 265 (429)
T ss_dssp HHHHHHHHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTT-TTT-TSSTTHHHHHHTCCCSEEE--
T ss_pred HHHHHHhCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccc-ccc-ccCcchHHHHhCCCCceeh--
Confidence 99998742 4567777654332 2344 899999999999999999997 565 332110 0011 346654
Q ss_pred CCCcC-CCCCeeEEEEeCCCcchhhHHHHhhhcc--cCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHH
Q 014724 312 THKSL-RGPRGGMIFFKKDPVLGVELESAINNAV--FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALAS 388 (419)
Q Consensus 312 ~hK~l-~GprgG~i~~~~~~~~~~~l~~~i~~~~--~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~ 388 (419)
++|+| .|++.|++++++ ++.+.+.... +.+...+.+....++...+++... ++..+++.++++++.+
T Consensus 266 ~sK~~~~G~~iG~~~~~~------~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~----~~~~~~~~~~~~~l~~ 335 (429)
T 3k28_A 266 LGKVIGGGLPVGAYGGKA------EIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQLT----PESYVEFERKAEMLEA 335 (429)
T ss_dssp ECGGGGTTSCCEEEEECH------HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHTCC----HHHHHHHHHHHHHHHH
T ss_pred hhhhhcCCCCeEEEEEcH------HHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHH
Confidence 67998 467899999987 6766664321 111111222233333333555432 5667778888888888
Q ss_pred HHHhC
Q 014724 389 RLVEL 393 (419)
Q Consensus 389 ~L~~~ 393 (419)
.|++.
T Consensus 336 ~L~~~ 340 (429)
T 3k28_A 336 GLRKA 340 (429)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88763
No 220
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.63 E-value=1.2e-13 Score=141.03 Aligned_cols=274 Identities=12% Similarity=-0.007 Sum_probs=148.8
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccC---
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--- 190 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~--- 190 (419)
.+|.|++|+.+.+.+. ...+....+ ..+ ....++++++++++.+.+ ..++++||++|++.++.++.+
T Consensus 68 ~~p~v~~A~~~~~~~~-~~~~~~~~~--~~~----~~~~la~~l~~~~~~~~~---~v~~~~gGseA~~~al~~~~~~~~ 137 (460)
T 3gju_A 68 GRQKIADAIATQAKNL-AYYHAYVGH--GTE----ASITLAKMIIDRAPKGMS---RVYFGLSGSDANETNIKLIWYYNN 137 (460)
T ss_dssp CCHHHHHHHHHHHHHH-SCCCCCTTC--CCH----HHHHHHHHHHHHSCTTEE---EEEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhc-ccccccccc--CCH----HHHHHHHHHHhhCCCCcC---EEEEeCchHHHHHHHHHHHHHHHH
Confidence 4799999998877542 112221111 112 223345778888766653 225566789999999988864
Q ss_pred -----CCCEEEEeCCCCCccccCccc-cc----cccccccccccEEEeccc--CCCCCCCC--------HHHHHHHhhh-
Q 014724 191 -----PHDRIMGLDLPHGGHLSHGFM-TP----KRRVSGTSIYFESMPYRL--DESTGLVD--------YDMLEKTAIL- 249 (419)
Q Consensus 191 -----pGD~Vl~~~~~~~g~~s~~~~-~~----~~~i~~~g~~~~~v~~~~--~~~~~~iD--------~d~Le~~l~~- 249 (419)
++|+|++.++.+.|....... +. +.........+..++++. ..++...| +++|++++++
T Consensus 138 ~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~le~~i~~~ 217 (460)
T 3gju_A 138 VLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCADKLEEMILAE 217 (460)
T ss_dssp HTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred hcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHHHHHHHHHHHHHhc
Confidence 568999999887554211000 00 000001111233444222 10111233 6889988864
Q ss_pred --cCCeEEEEcCCCCCC--cCC----hHHHHHHHHHhCCEEEEeccccccccccCCcC--CCCC-CCcEEEeCCCCcCCC
Q 014724 250 --FRPKLIIAGASAYPR--DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLRG 318 (419)
Q Consensus 250 --~~pklIi~~~s~~p~--~~d----l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~--~~~~-~~Div~~S~hK~l~G 318 (419)
.++++|+++.++++. ..+ +++|+++|++||++||+|++|. |+...|... ..++ ..|+++ ++|+|+|
T Consensus 218 ~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-g~gr~g~~~~~~~~~~~pdi~t--~sK~l~g 294 (460)
T 3gju_A 218 GPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVT-GFGRLGTMFGSDHYGIKPDLIT--IAKGLTS 294 (460)
T ss_dssp CGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSCHHHHHTCCCSEEE--ECGGGTT
T ss_pred CCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcccccchHhhcCCCCCeee--eehhhcC
Confidence 356778887644432 222 8999999999999999999964 543222110 0011 356665 5699966
Q ss_pred --CCeeEEEEeCCCcchhhHHHHhhhc-------ccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHH
Q 014724 319 --PRGGMIFFKKDPVLGVELESAINNA-------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASR 389 (419)
Q Consensus 319 --prgG~i~~~~~~~~~~~l~~~i~~~-------~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~ 389 (419)
+|.|++++++ ++.+.+... ....+.+++ ....++...+++.+..+ .+.+++.++.+++++.
T Consensus 295 G~~~lg~v~~~~------~i~~~~~~~~~~~~~~~~~~t~~~~-~~~~aaa~aal~~~~~~---~~~~~~~~~~~~~~~~ 364 (460)
T 3gju_A 295 AYAPLSGVIVAD------RVWQVLVQGSDKLGSLGHGWTYSAH-PICVAAGVANLELIDEM---DLVTNAGETGAYFRAE 364 (460)
T ss_dssp TSSCCEEEEEEH------HHHHHHHHHHHHHCSCSCCCTTTTC-HHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEECH------HHHHHHhcccccccccccCCCCCCC-HHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHH
Confidence 7899999988 677766421 111222222 22333333456654322 3344455555555555
Q ss_pred H----HhCC-cEEecCCCcceeEEEEeC
Q 014724 390 L----VELG-YKLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 390 L----~~~G-~~v~~~~t~~hlv~vd~~ 412 (419)
| .+.+ +..+. ....++++++.
T Consensus 365 l~~~l~~~~~~~~~~--~~g~~~~~~~~ 390 (460)
T 3gju_A 365 LAKAVGGHKNVGEVR--GDGMLAAVEFV 390 (460)
T ss_dssp HHHHHTTSTTEEEEE--EETTEEEEEEC
T ss_pred HHHHHhcCCCeEEEe--eeeEEEEEEEc
Confidence 5 3333 33332 12345666664
No 221
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.62 E-value=5.4e-14 Score=143.03 Aligned_cols=264 Identities=12% Similarity=-0.007 Sum_probs=145.0
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccC---
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--- 190 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~--- 190 (419)
.+|.|++|+.+.+... ...++ . ....+ .....+++++++++.+.+ ..++++||++|++.++.++..
T Consensus 61 ~~p~v~~A~~~~~~~~-~~~~~-~--~~~~~----~~~~la~~l~~~~~~~~~---~v~~~~sGseA~~~al~~~~~~~~ 129 (448)
T 3dod_A 61 RKKELDDAIKKQLGKI-AHSTL-L--GMTNV----PATQLAETLIDISPKKLT---RVFYSDSGAEAMEIALKMAFQYWK 129 (448)
T ss_dssp SCHHHHHHHHHHHTTC-SCCCC-S--SSEEH----HHHHHHHHHHHHSCTTEE---EEEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhc-cCccc-c--ccCCH----HHHHHHHHHHHhCCCCCC---EEEEeCchHHHHHHHHHHHHHHHH
Confidence 4799999999887542 21111 1 11222 222345788888865543 225667789999999988865
Q ss_pred -CC----CEEEEeCCCCCccccCcccccccccccccc------------ccEEEecccCCCCCC-----------CCHHH
Q 014724 191 -PH----DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLDESTGL-----------VDYDM 242 (419)
Q Consensus 191 -pG----D~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~------------~~~~v~~~~~~~~~~-----------iD~d~ 242 (419)
+| |+|++.++.+.|..... +...+. .+..++++ +.+. .|+++
T Consensus 130 ~~G~~~~~~vi~~~~~yhg~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~~~ 199 (448)
T 3dod_A 130 NIGKPEKQKFIAMKNGYHGDTIGA-------VSVGSIELFHHVYGPLMFESYKAPIP---YVYRSESGDPDECRDQCLRE 199 (448)
T ss_dssp HTTCTTCCEEEEEC------------------------------------CEEECCC---CCTTSSSCCHHHHHHHHHHH
T ss_pred hhCCCCCCEEEEECCCCCCccHHH-------HHhcCCccccccccCCCCCceEeCCC---ccccCCccchhhhhHHHHHH
Confidence 45 99999998875543111 111111 11222221 1111 25899
Q ss_pred HHHHhhh--cCCeEEEEcCCC-CC--CcCC----hHHHHHHHHHhCCEEEEeccccccccccCCcC--CCCC-CCcEEEe
Q 014724 243 LEKTAIL--FRPKLIIAGASA-YP--RDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTT 310 (419)
Q Consensus 243 Le~~l~~--~~pklIi~~~s~-~p--~~~d----l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~--~~~~-~~Div~~ 310 (419)
||++++. .++++|+++..+ ++ ...+ +++|+++|++||++||+|++|. |+...|... ..++ ..|+++
T Consensus 200 le~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~-g~g~~g~~~a~~~~~~~~di~t- 277 (448)
T 3dod_A 200 LAQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVAT-GFGRTGKMFACEHENVQPDLMA- 277 (448)
T ss_dssp HHHHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSGGGGGTCCCSEEE-
T ss_pred HHHHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEecccc-CCCcccchhhhhhcCCCCCEEE-
Confidence 9999872 356777777643 32 2222 8999999999999999999974 543222210 0111 356665
Q ss_pred CCCCcC-CC-CCeeEEEEeCCCcchhhHHHHhhh-------cccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHH
Q 014724 311 TTHKSL-RG-PRGGMIFFKKDPVLGVELESAINN-------AVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVS 381 (419)
Q Consensus 311 S~hK~l-~G-prgG~i~~~~~~~~~~~l~~~i~~-------~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~ 381 (419)
++|++ .| .+.|++++++ ++.+.+.. .....+.+++ ....++...+++.+.. +.+.+++.+
T Consensus 278 -~sK~l~~G~~~ig~v~~~~------~~~~~~~~~~~~~~~~~~~~t~~~~-~~~~aaa~aal~~~~~---~~~~~~~~~ 346 (448)
T 3dod_A 278 -AGKGITGGYLPIAVTFATE------DIYKAFYDDYENLKTFFHGHSYTGN-QLGCAVALENLALFES---ENIVEQVAE 346 (448)
T ss_dssp -ECGGGGTTSSCCEEEEEEH------HHHHTTCSCGGGCCCCCCCCTTTTC-HHHHHHHHHHHHHHHH---TTHHHHHHH
T ss_pred -ecccccCCcCceEEEEECH------HHHHHhhhccccCCcccccCCCCcC-HHHHHHHHHHHHHHhc---ccHHHHHHH
Confidence 56998 45 3889999988 67777654 1111222222 2233333345655432 234556666
Q ss_pred HHHHHHHHHHh---CC-cEEecCCCcceeEEEEeCC
Q 014724 382 NCRALASRLVE---LG-YKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 382 n~~~l~~~L~~---~G-~~v~~~~t~~hlv~vd~~~ 413 (419)
+.+++.+.|.+ .+ +.... ....++++++..
T Consensus 347 ~~~~~~~~l~~l~~~~~~~~~~--~~g~~~~~~~~~ 380 (448)
T 3dod_A 347 KSKKLHFLLQDLHALPHVGDIR--QLGFMCGAELVR 380 (448)
T ss_dssp HHHHHHHHHHHHTTSTTEEEEE--EETTEEEEEECS
T ss_pred HHHHHHHHHHHHhcCCCeEEEE--eeeEEEEEEEcc
Confidence 66677766655 22 22221 233467777753
No 222
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.62 E-value=9.8e-14 Score=140.09 Aligned_cols=274 Identities=15% Similarity=0.133 Sum_probs=150.7
Q ss_pred hcccccccC--C---CChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCCh
Q 014724 103 KSLELIASE--N---FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG 177 (419)
Q Consensus 103 ~~i~L~~se--n---~~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sG 177 (419)
..|++.++- + +.+|.|++|+.+.+.+....+|+. +...+ .+++++++++ ..+ ..++++||
T Consensus 54 ~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~-------~~~~~----la~~l~~~~~-~~~---~v~~~~sG 118 (429)
T 4e77_A 54 AYIDYVGSWGPMILGHNHPAIRQAVIEAVERGLSFGAPT-------EMEVK----MAQLVTDLVP-TMD---MVRMVNSG 118 (429)
T ss_dssp EEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCSCCSSCC-------HHHHH----HHHHHHHHST-TCS---EEEEESSH
T ss_pred EEEECCCchhccccCCCCHHHHHHHHHHHHhCcccCCCC-------HHHHH----HHHHHHhhCC-CCC---EEEEeCcH
Confidence 346665543 2 248999999998876532222221 22223 3467888886 332 23666778
Q ss_pred HHHHHHHHHHcc--CCCCEEEEeCCCCCccccCccccc-ccc-----cccccc----ccEEEecccCCCCCCCCHHHHHH
Q 014724 178 SPANFEVYTAIL--KPHDRIMGLDLPHGGHLSHGFMTP-KRR-----VSGTSI----YFESMPYRLDESTGLVDYDMLEK 245 (419)
Q Consensus 178 t~A~~~~~~all--~pGD~Vl~~~~~~~g~~s~~~~~~-~~~-----i~~~g~----~~~~v~~~~~~~~~~iD~d~Le~ 245 (419)
++|++.++.... .++++|++.++.+.+......... ... ....+. ......++ ..|+++|++
T Consensus 119 sea~~~al~~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~le~ 192 (429)
T 4e77_A 119 TEATMSAIRLARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCT------YNDLASVRQ 192 (429)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEETTCCCC------------------CCCTTSCGGGGTTEEEEC------TTCHHHHHH
T ss_pred HHHHHHHHHHHHHhhCCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcCCCCCccCCceeecC------CCCHHHHHH
Confidence 999999887543 356788888877654421000000 000 000000 00011111 138999999
Q ss_pred Hhhhc--CCeEEEEcCCCCC---CcCC----hHHHHHHHHHhCCEEEEeccccccccccCCcC--CCCC-CCcEEEeCCC
Q 014724 246 TAILF--RPKLIIAGASAYP---RDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTH 313 (419)
Q Consensus 246 ~l~~~--~pklIi~~~s~~p---~~~d----l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~--~~~~-~~Div~~S~h 313 (419)
++++. ++++|+++. +++ ...+ +++|+++|++||++||+|++|. |+ ..+... ..+. ..|++ |++
T Consensus 193 ~l~~~~~~~~~vi~ep-~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~-g~-r~g~~~~~~~~~~~pdi~--t~s 267 (429)
T 4e77_A 193 AFEQYPQEVACIIVEP-VAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMT-GF-RVALAGAQDYYHVIPDLT--CLG 267 (429)
T ss_dssp HHHHSTTTEEEEEECS-SBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTT-BT-TTBTTCHHHHTTCCCSEE--EEE
T ss_pred HHHhcCCCEEEEEECC-ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-Cc-ccCcchHHHhcCCCCCee--eec
Confidence 99753 456666654 433 2334 8999999999999999999975 55 222110 0111 34775 566
Q ss_pred CcC-CCCCeeEEEEeCCCcchhhHHHHhhhcc---cCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHH
Q 014724 314 KSL-RGPRGGMIFFKKDPVLGVELESAINNAV---FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASR 389 (419)
Q Consensus 314 K~l-~GprgG~i~~~~~~~~~~~l~~~i~~~~---~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~ 389 (419)
|+| +|+++|++++++ ++.+.+.... ..... +.+....++...+++.+..+ .+.+++.++.+++.+.
T Consensus 268 K~~~~G~~~G~~~~~~------~~~~~l~~~~~~~~~~t~-~~~~~~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~ 337 (429)
T 4e77_A 268 KIIGGGMPVGAFGGRR------EVMNALAPTGPVYQAGTL-SGNPIAMAAGFACLTEISQV---GVYETLTELTDSLATG 337 (429)
T ss_dssp GGGGTTSCCEEEEECH------HHHTTBTTTSSBCC--CC-CCCHHHHHHHHHHHHHHTST---THHHHHHHHHHHHHHH
T ss_pred ccccCCCCeEEEEECH------HHHHHhccCCCccccCCC-CCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHH
Confidence 998 567889999887 6766655321 11111 22333344444466665432 4455666666777776
Q ss_pred HHh----CCcEEecCCCcceeEEEEeCC
Q 014724 390 LVE----LGYKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 390 L~~----~G~~v~~~~t~~hlv~vd~~~ 413 (419)
|++ .++..... ....++++++..
T Consensus 338 L~~~~~~~~~~~~~~-~~g~~~~~~~~~ 364 (429)
T 4e77_A 338 LRHAAKEENIPLVVN-HVGGMFGLFFTN 364 (429)
T ss_dssp HHHHHHHTTCCCEEE-EETTEEEEECCS
T ss_pred HHHHHHhCCCceEEE-EeeeEEEEEEcc
Confidence 655 35432221 234567777653
No 223
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.62 E-value=8.8e-15 Score=146.41 Aligned_cols=258 Identities=12% Similarity=-0.013 Sum_probs=151.3
Q ss_pred hhcccccccCC-C-ChHHHHHHHhhhhh-cc--CCCCCCCCCCCCch--hHHHHHHHHHHHHHHHHcCCCCCCCceeEec
Q 014724 102 FKSLELIASEN-F-TSRAVMEAVGSCLT-NK--YSEGLPGKRYYGGN--EYIDELETLCQKRALAAFNLDENKWGVNVQP 174 (419)
Q Consensus 102 ~~~i~L~~sen-~-~~~~V~eal~~~l~-~~--y~~g~p~~r~~~g~--~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~ 174 (419)
.+.|+|..++. + +++.+.+++..... .. ...+|+.. .|. +...++++.+.+++. ..|.+.... .+|++
T Consensus 22 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~---~G~~~~~~~~lr~aia~~~~-~~g~~~~~~-~~i~~ 96 (391)
T 3bwn_A 22 DFVVNLDHGDPTAYEEYWRKMGDRCTVTIRGCDLMSYFSDM---TNLCWFLEPELEDAIKDLHG-VVGNAATED-RYIVV 96 (391)
T ss_dssp TSCEECSSCCCGGGHHHHHHTGGGSCEEECTTTTCSSCSCT---TSSSTTSCHHHHHHHHHHHH-HHCSBCCSS-SEEEE
T ss_pred CCeeEcCCCCCCCCCCHHHHHhHHHHhhcCccchhhcCCCC---CCcccccCHHHHHHHHHHHH-hcCCCCCCC-CeEEE
Confidence 34577766653 3 34556666533221 11 11133321 221 001366655555554 345543210 14667
Q ss_pred CCh-HHHHHHHHHHccCCCC----EEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhh
Q 014724 175 LSG-SPANFEVYTAILKPHD----RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL 249 (419)
Q Consensus 175 ~sG-t~A~~~~~~all~pGD----~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~ 249 (419)
++| ++|+..++.++++||| +|++.+|.|.++.. .+...|..+..++ +|.++ ++ .
T Consensus 97 t~G~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~~~--------~~~~~g~~~~~~~--~d~~~--l~---------~ 155 (391)
T 3bwn_A 97 GTGSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVE--------ETTYVRSGMYKWE--GDAWG--FD---------K 155 (391)
T ss_dssp EEHHHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHHHH--------HHHTTCBTTEEEE--EESTT--CC---------C
T ss_pred eCChHHHHHHHHHHhcCCCCCCcceEEEcCCCchhHHH--------HHHHcCCeEEEec--CCHHH--cC---------C
Confidence 777 5799999999999999 99999999877642 2344566554444 44221 22 1
Q ss_pred cCCeEEEEcCCCCCCcCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC---CCcEEEeCCCCcC--CCCCeeEE
Q 014724 250 FRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK---YCDVVTTTTHKSL--RGPRGGMI 324 (419)
Q Consensus 250 ~~pklIi~~~s~~p~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~---~~Div~~S~hK~l--~GprgG~i 324 (419)
.++|+|++++|+||+-.-+.+|++.++.++++||+|++|+.+ . ..++. +.+++++|+||+| +|+|.||+
T Consensus 156 ~~~k~v~l~~p~NPtG~~~~~l~~~~~~~~~~ii~De~y~~~-----~-~~~l~~~~~~~i~~~S~SK~~g~~GlRiG~~ 229 (391)
T 3bwn_A 156 KGPYIELVTSPNNPDGTIRETVVNRPDDDEAKVIHDFAYYWP-----H-YTPITRRQDHDIMLFTFSKITGHAGSRIGWA 229 (391)
T ss_dssp CSCEEEEEESSCTTTCCCCCCCC-----CCCEEEEECTTCST-----T-TSCCCCCBCCSEEEEEHHHHHSCGGGCEEEE
T ss_pred CCCEEEEECCCCCCCchhHHHHHHHhhcCCCEEEEeCCCCCC-----C-CCccccCCCCeEEEEechhhcCCCccceEEE
Confidence 378999999999996433334544222233999999998632 1 11222 4679999999986 68899999
Q ss_pred EE-eCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhc---------ChHHHHHHHHHHHHHHHHHHHHHhC-
Q 014724 325 FF-KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ---------SPEFKVYQNKVVSNCRALASRLVEL- 393 (419)
Q Consensus 325 ~~-~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~---------~~~~~~~~~~v~~n~~~l~~~L~~~- 393 (419)
+. ++ ++.+.+......... +++.....++..+++... ....++..+++.++++++.+.|++.
T Consensus 230 ~~~~~------~l~~~l~~~~~~~~~-~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 302 (391)
T 3bwn_A 230 LVKDK------EVAKKMVEYIIVNSI-GVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREVVKESD 302 (391)
T ss_dssp EECCH------HHHHHHHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred EecCH------HHHHHHHHHhccccc-CCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 97 55 566655443221111 223333334444565431 3456778888999999999999987
Q ss_pred CcEEe
Q 014724 394 GYKLV 398 (419)
Q Consensus 394 G~~v~ 398 (419)
|+++.
T Consensus 303 ~~~~~ 307 (391)
T 3bwn_A 303 AFTLP 307 (391)
T ss_dssp SEECC
T ss_pred Ccccc
Confidence 66654
No 224
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.61 E-value=2.5e-13 Score=139.63 Aligned_cols=274 Identities=12% Similarity=-0.017 Sum_probs=156.3
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccC---
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--- 190 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~--- 190 (419)
.+|.|++|+.+.+.. ...+++. .+ .++ ....+.++++++++.+.+ + .++++||++|+..++..+.+
T Consensus 71 ~~p~v~~A~~~~l~~-~~~~~~~-~~--~~~----~~~~la~~l~~~~~~~~~-~--v~~~~sGseA~~~Aik~a~~~~~ 139 (476)
T 3i5t_A 71 GRREIVDAMAHQAMV-LPYASPW-YM--ATS----PAARLAEKIATLTPGDLN-R--IFFTTGGSTAVDSALRFSEFYNN 139 (476)
T ss_dssp CCHHHHHHHHHHHHH-CCCCCTT-TC--BCH----HHHHHHHHHHTTSSTTCC-E--EEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-ccCcccC-cc--CCH----HHHHHHHHHHhcCCCCcC-E--EEEeCchHHHHHHHHHHHHHHHH
Confidence 489999999988754 3222221 11 122 223345788888865553 2 25667789999999988753
Q ss_pred -----CCCEEEEeCCCCCccccCccc-ccc----ccccccccccEEEecccCCCCCCCC--------HHHHHHHhhh---
Q 014724 191 -----PHDRIMGLDLPHGGHLSHGFM-TPK----RRVSGTSIYFESMPYRLDESTGLVD--------YDMLEKTAIL--- 249 (419)
Q Consensus 191 -----pGD~Vl~~~~~~~g~~s~~~~-~~~----~~i~~~g~~~~~v~~~~~~~~~~iD--------~d~Le~~l~~--- 249 (419)
.+++|++.++.+.|....... +.. .........+..++++........| +++||+++++
T Consensus 140 ~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~le~~i~~~~~ 219 (476)
T 3i5t_A 140 VLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQEFEDRIESLGP 219 (476)
T ss_dssp HTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHHHHHHHHHHHHHCG
T ss_pred hcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCcccccCCCchHHHHHHHHHHHHHHHHhcCC
Confidence 367999999887554211000 000 0000001112333332210011122 7899998864
Q ss_pred cCCeEEEEcCCCCCC--cCC----hHHHHHHHHHhCCEEEEeccccccccccCCcC--C-CCC-CCcEEEeCCCCcCC-C
Q 014724 250 FRPKLIIAGASAYPR--DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--D-PFK-YCDVVTTTTHKSLR-G 318 (419)
Q Consensus 250 ~~pklIi~~~s~~p~--~~d----l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~--~-~~~-~~Div~~S~hK~l~-G 318 (419)
.++++|+++.++++. ..+ +++|+++|++||++||+|++|. |+...|... . .+. ..|+++ ++|+++ |
T Consensus 220 ~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~-g~gr~G~~~~~~~~~~v~pdi~t--~sK~l~~G 296 (476)
T 3i5t_A 220 DTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVT-GFGRCGEWFASEKVFGVVPDIIT--FAKGVTSG 296 (476)
T ss_dssp GGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSCHHHHTTCCCCSEEE--ECGGGGTT
T ss_pred CCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEeccc-CCccccCceeeecccCCCcchhh--hhhhhcCC
Confidence 356788887654432 222 8999999999999999999974 543333211 1 122 457775 569995 4
Q ss_pred -CCeeEEEEeCCCcchhhHHHHhhhc-------ccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHH
Q 014724 319 -PRGGMIFFKKDPVLGVELESAINNA-------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRL 390 (419)
Q Consensus 319 -prgG~i~~~~~~~~~~~l~~~i~~~-------~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L 390 (419)
++.|++++++ ++.+.+... ....+.++. ....+|..++|+.+.+ +.+.+++.++.+++.+.|
T Consensus 297 ~~plg~v~~~~------~i~~~~~~~~~~~~~~~~~~t~~~n-p~a~aAa~aaL~~~~~---~~~~~~~~~~~~~l~~~L 366 (476)
T 3i5t_A 297 YVPLGGLAISE------AVLARISGENAKGSWFTNGYTYSNQ-PVACAAALANIELMER---EGIVDQAREMADYFAAAL 366 (476)
T ss_dssp SSCCEEEEECH------HHHHTTSGGGCTTCEECCCCTTTTC-HHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHH
T ss_pred CcCeEEEEECH------HHHHHHhcCCcccccccccCCCCcC-HHHHHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHH
Confidence 7889999987 677776542 111222232 2233333345665432 345677788888898888
Q ss_pred HhCC----cEEecCCCcceeEEEEeCC
Q 014724 391 VELG----YKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 391 ~~~G----~~v~~~~t~~hlv~vd~~~ 413 (419)
++++ +..+. ....++++++..
T Consensus 367 ~~l~~~~~v~~v~--~~G~~~~i~~~~ 391 (476)
T 3i5t_A 367 ASLRDLPGVAETR--SVGLVGCVQCLL 391 (476)
T ss_dssp HTTTTSTTEEEEE--EETTEEEEEECC
T ss_pred HHHhcCCCeEEEE--ecCceeEEEEec
Confidence 8652 22222 223456677653
No 225
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.61 E-value=4.2e-14 Score=144.37 Aligned_cols=283 Identities=11% Similarity=-0.019 Sum_probs=152.4
Q ss_pred ccccccc--CCC---ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChH
Q 014724 104 SLELIAS--ENF---TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS 178 (419)
Q Consensus 104 ~i~L~~s--en~---~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt 178 (419)
.|++.++ .+. .+|.|++|+.+.+.+. ...++..++ ..+ ....++++++++++.+.+ ..++++||+
T Consensus 52 ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~-~~~~~~~~~--~~~----~~~~la~~l~~~~~~~~~---~v~~~~ggs 121 (459)
T 4a6r_A 52 IIDGMAGLWCVNVGYGRKDFAEAARRQMEEL-PFYNTFFKT--THP----AVVELSSLLAEVTPAGFD---RVFYTNSGS 121 (459)
T ss_dssp EEETTHHHHTCTTCBCCHHHHHHHHHHHHHC-SCCCTTSSS--CCH----HHHHHHHHHHHHSCTTCC---EEEEESSHH
T ss_pred EEECCCchhcccCCCCCHHHHHHHHHHHHhc-ccccccccc--CCH----HHHHHHHHHHHhCCCCCC---EEEEeCchH
Confidence 4555544 222 4799999998887542 212222111 122 223445788888877654 125566789
Q ss_pred HHHHHHHHHccC--------CCCEEEEeCCCCCccccCccc-cc----cccccccccccEEEeccc--CCCCCCCC----
Q 014724 179 PANFEVYTAILK--------PHDRIMGLDLPHGGHLSHGFM-TP----KRRVSGTSIYFESMPYRL--DESTGLVD---- 239 (419)
Q Consensus 179 ~A~~~~~~all~--------pGD~Vl~~~~~~~g~~s~~~~-~~----~~~i~~~g~~~~~v~~~~--~~~~~~iD---- 239 (419)
+|+..++.++.+ ++|+|++.++.+.|....... +. +.........+..++++. +..++ +|
T Consensus 122 eA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~ 200 (459)
T 4a6r_A 122 ESVDTMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEF 200 (459)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHH
Confidence 999999988875 579999999887554210000 00 000000111223333221 10112 45
Q ss_pred ----HHHHHHHhhh---cCCeEEEEcCCCCC--CcCC----hHHHHHHHHHhCCEEEEeccccccccccCCcC-C-CCC-
Q 014724 240 ----YDMLEKTAIL---FRPKLIIAGASAYP--RDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA-D-PFK- 303 (419)
Q Consensus 240 ----~d~Le~~l~~---~~pklIi~~~s~~p--~~~d----l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~-~-~~~- 303 (419)
+++|++.+++ .++++|+++..+++ ...+ +++|+++|++||++||+|++|. |+...|... . .++
T Consensus 201 ~~~~~~~le~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-g~gr~G~~~~~~~~~~ 279 (459)
T 4a6r_A 201 GVVAARWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVIC-GFGRTGEWFGHQHFGF 279 (459)
T ss_dssp HHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSHHHHHTC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcccccchHhhcCC
Confidence 7889998864 34567777653322 2233 8999999999999999999974 543333110 0 011
Q ss_pred CCcEEEeCCCCcCCC--CCeeEEEEeCCCcchhhHHHHhhhc---ccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHH
Q 014724 304 YCDVVTTTTHKSLRG--PRGGMIFFKKDPVLGVELESAINNA---VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNK 378 (419)
Q Consensus 304 ~~Div~~S~hK~l~G--prgG~i~~~~~~~~~~~l~~~i~~~---~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~ 378 (419)
..|+++ ++|+++| +|.|++++++ ++.+.+... ....+.+++. ...++...+|+.+..+ .+.++
T Consensus 280 ~pdi~t--~sK~l~gg~~~lg~v~~~~------~i~~~~~~~~~~~~~~t~~~~~-~~~aaa~aal~~~~~~---~~~~~ 347 (459)
T 4a6r_A 280 QPDLFT--AAKGLSSGYLPIGAVFVGK------RVAEGLIAGGDFNHGFTYSGHP-VCAAVAHANVAALRDE---GIVQR 347 (459)
T ss_dssp CCSEEE--ECGGGGTTSSCCEEEEECH------HHHHHHHHHCTTHHHHHHCSCH-HHHHHHHHHHHHHHHT---CHHHH
T ss_pred CCCeee--hhhhhcCCCCCccceeeCH------HHHHHhhcCCCcccCCCCCCCH-HHHHHHHHHHHHHhcc---hHHHH
Confidence 357775 5699955 7889999987 676666421 1111112222 2233333356544322 33455
Q ss_pred HH-HHHHHHHHHH----HhCC-cEEecCCCcceeEEEEeC
Q 014724 379 VV-SNCRALASRL----VELG-YKLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 379 v~-~n~~~l~~~L----~~~G-~~v~~~~t~~hlv~vd~~ 412 (419)
+. ++.+++.+.| .+.+ +..+. ....++++++.
T Consensus 348 ~~~~~~~~~~~~l~~~l~~~~~~~~~~--~~g~~~~~~~~ 385 (459)
T 4a6r_A 348 VKDDIGPYMQKRWRETFSRFEHVDDVR--GVGMVQAFTLV 385 (459)
T ss_dssp HHHTHHHHHHHHHHHHHTTCTTEEEEE--EETTEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEEE--EEEEEEEEEEe
Confidence 55 5556666665 3332 33332 12345666664
No 226
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.59 E-value=4.4e-15 Score=150.56 Aligned_cols=270 Identities=11% Similarity=-0.014 Sum_probs=163.6
Q ss_pred hcccccccCCC--ChHHHHHHHhhhhhccCCC--CCCCCCCCCchhHHHHHHHHHHHHHHHHcC--CCCCCCceeEecCC
Q 014724 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSE--GLPGKRYYGGNEYIDELETLCQKRALAAFN--LDENKWGVNVQPLS 176 (419)
Q Consensus 103 ~~i~L~~sen~--~~~~V~eal~~~l~~~y~~--g~p~~r~~~g~~~~~~lE~~~~~~la~~~g--~~~~~~~v~V~~~s 176 (419)
..|+|..+++. .++.+++++.+.+...... +|+... .|.....++++.+.+++.+..+ ++++ +|++++
T Consensus 57 ~~i~l~~g~~~~~~~~~v~~a~~~~l~~~~~~~~~Y~~~~--~G~~~~~~lr~aia~~~~~~~~~~~~~~----~iv~t~ 130 (427)
T 2hox_A 57 CSADVASGDGLFLEEYWKQHKEASAVLVSPWHRMSYFFNP--VSNFISFELEKTIKELHEVVGNAAAKDR----YIVFGV 130 (427)
T ss_dssp CCEECCSCCCGGGHHHHTTSHHHHCEEECTTTTCSSSCSS--CCTTCCHHHHHHHHHHHHHHTCBCCTTC----EEEEES
T ss_pred ceEEecCcCCCCCCCHHHHHhHHhhhhcCCcccccCCCCC--CCccchHHHHHHHHHHHHHhCCcCCCCC----EEEEeC
Confidence 34677766653 3467777777665211111 244321 0311134677666666665444 3332 466666
Q ss_pred h-HHHHHHHHHHc--------cCCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHh
Q 014724 177 G-SPANFEVYTAI--------LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTA 247 (419)
Q Consensus 177 G-t~A~~~~~~al--------l~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l 247 (419)
| ++|+..++.++ ++|||+|++++|.|.++.. .+...|..+. . +.+|+++|++.+
T Consensus 131 G~~~al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~~~--------~~~~~g~~~~--~-------~~~d~~~l~~~~ 193 (427)
T 2hox_A 131 GVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFRE--------QTKYFDKKGY--V-------WAGNAANYVNVS 193 (427)
T ss_dssp HHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHH--------HHHHSCBTTE--E-------EEEEGGGGTTCS
T ss_pred CHHHHHHHHHHHHhhccccccCCCCCEEEEeCCCcccHHH--------HHHHcCCeee--e-------ecCCHHHHHHhh
Confidence 5 67999999999 9999999999998866531 2233454322 2 236778888777
Q ss_pred hhcCCeEEEEcCCCCCC--cCChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC-CCcEEEeCCCCcC--CCCCee
Q 014724 248 ILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSL--RGPRGG 322 (419)
Q Consensus 248 ~~~~pklIi~~~s~~p~--~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~-~~Div~~S~hK~l--~GprgG 322 (419)
.+ ++|+|++++|+||+ ..+ + +++ ++..++|++++.... . ...+. ..+++++|+||++ +|.|.|
T Consensus 194 ~~-~~k~v~l~~p~NPtG~~~~-~----~l~--~~~~i~d~~~~~~~~--s--~~~~~~~~~i~~~S~SK~~g~~G~RiG 261 (427)
T 2hox_A 194 NP-EQYIEMVTSPNNPEGLLRH-A----VIK--GCKSIYDMVYYWPHY--T--PIKYKADEDILLFTMSKFTGHSGSRFG 261 (427)
T ss_dssp CG-GGEEEEEESSCTTTCCCCC-C----SST--TCEEEEECTTCSTTT--S--CCCSCBCCSEEEEEHHHHTSCGGGCCE
T ss_pred cC-CceEEEEcCCCCCcccccH-H----HHc--CCCEEEeecccCCCC--C--ccccCCCceEEEEeChhcCCCCCceEE
Confidence 64 68999999999985 345 2 333 567888987642110 0 01122 5689999999986 678899
Q ss_pred EEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhc----------ChHHHHHHHHHHHHHHHHHHHHHh
Q 014724 323 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ----------SPEFKVYQNKVVSNCRALASRLVE 392 (419)
Q Consensus 323 ~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~----------~~~~~~~~~~v~~n~~~l~~~L~~ 392 (419)
+++++++ ++.+.+.........+.+.....+ +..+|.... ...+++.++++.+++++|.+.|++
T Consensus 262 ~~~~~~~-----~l~~~l~~~~~~~~~~~~~~~q~a-~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 335 (427)
T 2hox_A 262 WALIKDE-----SVYNNLLNYMTKNTEGTPRETQLR-SLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQ 335 (427)
T ss_dssp EEEECCH-----HHHHHHHHHHHHHTSSCCHHHHHH-HHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEECCH-----HHHHHHHHHHHhcCCCCCHHHHHH-HHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999532 666666543322222333333332 333454321 223456677888899999999998
Q ss_pred C-CcEE--ec-C----------CCcceeEEEEeCC
Q 014724 393 L-GYKL--VS-G----------GSDNHLVLVDLRP 413 (419)
Q Consensus 393 ~-G~~v--~~-~----------~t~~hlv~vd~~~ 413 (419)
. |+++ +. . .....++|+++..
T Consensus 336 ~~g~~~~~~~~~~~~~~~~~~~p~~g~f~~~~~~~ 370 (427)
T 2hox_A 336 SDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEW 370 (427)
T ss_dssp SSSEECCCCCSCEEETTTTEEECCCCSEEEEEECS
T ss_pred CcCccccccccccccccccccCCCCceEEEEECCC
Confidence 7 8775 21 0 1125678999864
No 227
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.58 E-value=1.1e-13 Score=142.03 Aligned_cols=276 Identities=13% Similarity=0.016 Sum_probs=156.8
Q ss_pred ccccccc--CCC---ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChH
Q 014724 104 SLELIAS--ENF---TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS 178 (419)
Q Consensus 104 ~i~L~~s--en~---~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt 178 (419)
.|++.++ .+. .+|.|++|+.+.+.. ....+...++ .++ ......++++++++.+.+ ..++++||+
T Consensus 57 ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~-~~~~~~~~~~--~~~----~~~~lae~l~~~~~~~~~---~v~~~~sGs 126 (472)
T 3hmu_A 57 ILDAMAGLWCVNIGYGRDELAEVAARQMRE-LPYYNTFFKT--THV----PAIALAQKLAELAPGDLN---HVFFAGGGS 126 (472)
T ss_dssp EECTTHHHHTCTTCBCCHHHHHHHHHHHHH-CSCCCSSSSE--ECH----HHHHHHHHHHHHSCTTEE---EEEEESSHH
T ss_pred EEECCCchhhccCCCCCHHHHHHHHHHHHh-cccccccccc--CCH----HHHHHHHHHHHhCCCCCC---EEEEeCCHH
Confidence 4555554 222 479999999888754 2212221111 122 222344778888876543 125566789
Q ss_pred HHHHHHHHHccC--------CCCEEEEeCCCCCccccCcccccccccccccc-----------ccEEEeccc--CCCCCC
Q 014724 179 PANFEVYTAILK--------PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-----------YFESMPYRL--DESTGL 237 (419)
Q Consensus 179 ~A~~~~~~all~--------pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~-----------~~~~v~~~~--~~~~~~ 237 (419)
+|++.++..+.+ ++++|++.++.+.|... + .....+. .+..++++. +..++
T Consensus 127 eA~~~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~-~------~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~- 198 (472)
T 3hmu_A 127 EANDTNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTV-A------SSALGGMAGMHAQSGLIPDVHHINQPNWWAEGGD- 198 (472)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSH-H------HHHHSCCHHHHHTTCCCSSEEEECCCCHHHHCTT-
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccH-H------hhhccCChhhccccCCCCCcEEeCCCccccCCcc-
Confidence 999999988764 46899999888655421 1 0111111 123333221 10112
Q ss_pred CC--------HHHHHHHhhh---cCCeEEEEcCCCCC--CcCC----hHHHHHHHHHhCCEEEEeccccccccccCCcC-
Q 014724 238 VD--------YDMLEKTAIL---FRPKLIIAGASAYP--RDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA- 299 (419)
Q Consensus 238 iD--------~d~Le~~l~~---~~pklIi~~~s~~p--~~~d----l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~- 299 (419)
.| +++|++++++ .++++|+++..+++ ...+ +++|+++|++||++||+|++| .|+...|...
T Consensus 199 ~~~~~~~~~~~~~le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~-~gfgr~G~~~a 277 (472)
T 3hmu_A 199 MDPEEFGLARARELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVI-CGFGRTGNWFG 277 (472)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTT-TTTTTTSSSCH
T ss_pred cCHHHHHHHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccc-cCCcccCccch
Confidence 34 7889988864 34567777654332 2333 899999999999999999997 4543323110
Q ss_pred -CCCC-CCcEEEeCCCCcCCC--CCeeEEEEeCCCcchhhHHHHhhhcc--cCCCCCCChHHHHHHHHHHHHHhcChHHH
Q 014724 300 -DPFK-YCDVVTTTTHKSLRG--PRGGMIFFKKDPVLGVELESAINNAV--FPGLQGGPHNHTIGGLAVCLKHAQSPEFK 373 (419)
Q Consensus 300 -~~~~-~~Div~~S~hK~l~G--prgG~i~~~~~~~~~~~l~~~i~~~~--~~~~~g~p~~~~iaala~al~~~~~~~~~ 373 (419)
..++ ..|+++ ++|+++| ++.|++++++ ++.+.+.... ..++.++. ....+|..++|+.+.+ +
T Consensus 278 ~~~~~v~pdi~t--~sK~l~gg~~plG~v~~~~------~i~~~~~~~~~~~~~t~~~n-p~a~aAa~aaL~~~~~---~ 345 (472)
T 3hmu_A 278 TQTMGIRPHIMT--IAKGLSSGYAPIGGSIVCD------EVAHVIGKDEFNHGYTYSGH-PVAAAVALENLRILEE---E 345 (472)
T ss_dssp HHHHTCCCSEEE--ECGGGTTTSSCCEEEEEEH------HHHHHHTTSCBCCCCTTTTC-HHHHHHHHHHHHHHHH---T
T ss_pred hHHhCCCCceee--echhhhcCCcceEEEEECH------HHHHhcccCCccccCCCCCC-HHHHHHHHHHHHHHHH---h
Confidence 0011 357775 5699965 7889999987 6777773221 11222222 2233333345655432 2
Q ss_pred HHHHHHH-HHHHHHHHHHHhC----CcEEecCCCcceeEEEEeC
Q 014724 374 VYQNKVV-SNCRALASRLVEL----GYKLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 374 ~~~~~v~-~n~~~l~~~L~~~----G~~v~~~~t~~hlv~vd~~ 412 (419)
.+.+++. ++.+++.+.|+++ ++..+. ....++.+++.
T Consensus 346 ~~~~~~~~~~~~~l~~~L~~l~~~~~v~~vr--~~G~~~~i~~~ 387 (472)
T 3hmu_A 346 NILDHVRNVAAPYLKEKWEALTDHPLVGEAK--IVGMMASIALT 387 (472)
T ss_dssp THHHHHHHTHHHHHHHHHHGGGGSTTEEEEE--EETTEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCeEEEE--ecCceEEEEEe
Confidence 4566677 7778888888664 122222 23346667764
No 228
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.56 E-value=2.7e-13 Score=138.31 Aligned_cols=282 Identities=15% Similarity=0.055 Sum_probs=150.4
Q ss_pred ccccccc--CCC---ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChH
Q 014724 104 SLELIAS--ENF---TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS 178 (419)
Q Consensus 104 ~i~L~~s--en~---~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt 178 (419)
.|++.++ .+. .+|.|++|+.+.+... . .+....+. . +.....+++++++++.+..+ ..++++||+
T Consensus 66 ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~-~-~~~~~~~~--~----~~~~~la~~l~~~~~~~~~~--~v~~~~sGs 135 (453)
T 4ffc_A 66 FIDLGAGIAVTTVGASHPAVAAAIADQATHF-T-HTCFMVTP--Y----EQYVQVAELLNALTPGDHDK--RTALFNSGA 135 (453)
T ss_dssp EEESSHHHHTCTTCTTCHHHHHHHHHHHHHC-S-CCTTTTSC--C----HHHHHHHHHHHHHSSCSSCE--EEEEESSHH
T ss_pred EEEcCCCcccCcCCCCCHHHHHHHHHHHHhc-c-ccccCcCC--C----HHHHHHHHHHHHhCCCCCCc--EEEEeCcHH
Confidence 4555544 222 4899999998887542 1 12211111 1 22233457888888754211 235667789
Q ss_pred HHHHHHHHHccC--CCCEEEEeCCCCCccccCcccc-----c-cccccccccccEEEecccCC-CCCCCC--------HH
Q 014724 179 PANFEVYTAILK--PHDRIMGLDLPHGGHLSHGFMT-----P-KRRVSGTSIYFESMPYRLDE-STGLVD--------YD 241 (419)
Q Consensus 179 ~A~~~~~~all~--pGD~Vl~~~~~~~g~~s~~~~~-----~-~~~i~~~g~~~~~v~~~~~~-~~~~iD--------~d 241 (419)
+|++.++..+.. .+++|++.++.+.|+....... . +.........+..++++... +....+ .+
T Consensus 136 eA~~~alk~a~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 215 (453)
T 4ffc_A 136 EAVENAIKVARLATGRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAIS 215 (453)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHH
Confidence 999999966542 4589999988875542110000 0 00000011123444443210 111122 35
Q ss_pred HHHHHhhhcCCeEEEEcCCCCCC---cCC----hHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC----CCcEEEe
Q 014724 242 MLEKTAILFRPKLIIAGASAYPR---DFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----YCDVVTT 310 (419)
Q Consensus 242 ~Le~~l~~~~pklIi~~~s~~p~---~~d----l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~----~~Div~~ 310 (419)
.|++.+...++++|+++ |.++. ..+ +++|+++|++||++||+|++| .|+...|.. ..++ ..|+++
T Consensus 216 ~l~~~i~~~~~aavi~e-p~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~-~g~g~~g~~-~a~~~~~~~pdi~t- 291 (453)
T 4ffc_A 216 RIETQIGAQSLAAIIIE-PIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQ-TGFARTGAW-FASEHEGIVPDIVT- 291 (453)
T ss_dssp HHHHHTCGGGEEEEEEC-SSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTT-TTTTTTSSS-STHHHHTCCCSEEE-
T ss_pred HHHHhcCCCCEEEEEEc-CCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCc-cCCCccccc-chhhhcCCCcchHh-
Confidence 56665543344556555 44442 222 899999999999999999997 454332221 1111 346665
Q ss_pred CCCCcC-CCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHH
Q 014724 311 TTHKSL-RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASR 389 (419)
Q Consensus 311 S~hK~l-~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~ 389 (419)
++|++ .|+|.|++++++ ++.+.+.......+.+++... .++...+++.+.. +.+.+++.++.+++.+.
T Consensus 292 -~sK~~~~G~~~G~~~~~~------~i~~~~~~~~~~~t~~~~~~~-~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~ 360 (453)
T 4ffc_A 292 -MAKGIAGGMPLSAVTGRA------ELMDAVYAGGLGGTYGGNPVT-CAAAVAALGVMRE---LDLPARARAIEASVTSR 360 (453)
T ss_dssp -ECGGGGTTSSCEEEEEEH------HHHTTSCTTSSCCSSSSCHHH-HHHHHHHHHHHHH---TTHHHHHHHHHHHHHHH
T ss_pred -hhhhhcCCcCeEEEEECH------HHHhhhcccCcCCCCCcCHHH-HHHHHHHHHHhhh---hhHHHHHHHHHHHHHHH
Confidence 56998 577889999987 676666543333333333333 3333335654432 23455566666666666
Q ss_pred HHh----CC-cEEecCCCcceeEEEEeC
Q 014724 390 LVE----LG-YKLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 390 L~~----~G-~~v~~~~t~~hlv~vd~~ 412 (419)
|++ .+ +..+. ....++++++.
T Consensus 361 l~~~~~~~~~~~~~~--~~g~~~~~~~~ 386 (453)
T 4ffc_A 361 LSALAEEVDIIGEVR--GRGAMLAIEIV 386 (453)
T ss_dssp HHHHHHHCSSEEEEE--EETTEEEEEEB
T ss_pred HHHHHhhCCCeEEEE--eeceEEEEEEe
Confidence 654 32 33222 22346777764
No 229
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.56 E-value=5.2e-13 Score=136.07 Aligned_cols=273 Identities=12% Similarity=0.035 Sum_probs=146.2
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccC--C
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--P 191 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~--p 191 (419)
.+|.|++|+.+.+... . .+....+ ..+ .....+++++++++.+..+ ..++++||++|++.++..+.. .
T Consensus 78 ~~p~v~~A~~~~~~~~-~-~~~~~~~--~~~----~~~~la~~l~~~~~~~~~~--~v~~~~sGseA~~~Alk~a~~~~g 147 (451)
T 3oks_A 78 SAPKVVEAVRSQVGDF-T-HTCFMVT--PYE----GYVAVCEQLNRLTPVRGDK--RSALFNSGSEAVENAVKIARSHTH 147 (451)
T ss_dssp TCHHHHHHHHHHHTTC-S-CCTTTTS--CCH----HHHHHHHHHHHHSSCCSSE--EEEEESSHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHhc-c-cccCCcc--CCH----HHHHHHHHHHHhCCcCCCC--EEEEeCcHHHHHHHHHHHHHHhcC
Confidence 4899999998887532 1 1211111 112 2223457888888744211 235667889999999976653 4
Q ss_pred CCEEEEeCCCCCccccCcccc-----c-cccccccccccEEEeccc---------CCCC-CCCCHHHHHHHhhh----cC
Q 014724 192 HDRIMGLDLPHGGHLSHGFMT-----P-KRRVSGTSIYFESMPYRL---------DEST-GLVDYDMLEKTAIL----FR 251 (419)
Q Consensus 192 GD~Vl~~~~~~~g~~s~~~~~-----~-~~~i~~~g~~~~~v~~~~---------~~~~-~~iD~d~Le~~l~~----~~ 251 (419)
+++|++.++.+.|+....... . +.........+..++++. +.+. ...+++.+++.+++ .+
T Consensus 148 ~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~ 227 (451)
T 3oks_A 148 KPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAITVIDKQIGADN 227 (451)
T ss_dssp CCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHHHHHHHHTCGGG
T ss_pred CCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHHHHHHHHhhcCCCC
Confidence 588999988865542110000 0 000000111234444331 0000 01235555555542 34
Q ss_pred CeEEEEcCCCCC---CcCC----hHHHHHHHHHhCCEEEEeccccccccccCCcC--CCCC-CCcEEEeCCCCcC-CCCC
Q 014724 252 PKLIIAGASAYP---RDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSL-RGPR 320 (419)
Q Consensus 252 pklIi~~~s~~p---~~~d----l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~--~~~~-~~Div~~S~hK~l-~Gpr 320 (419)
+++|+++. .++ ...+ +++|+++|++||++||+|++|. |+...|... ..++ ..|++ |++|+| .|+|
T Consensus 228 ~aavi~ep-~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~g~~g~~~~~~~~~~~pdi~--t~sK~l~~G~~ 303 (451)
T 3oks_A 228 LAAVVIEP-IQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQT-GFARTGAMFACEHEGIDPDLI--VTAKGIAGGLP 303 (451)
T ss_dssp EEEEEECS-SBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSGGGGGTCCCSEE--EECGGGGTTSS
T ss_pred EEEEEEcC-CcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEeccc-CCCccccchhhhhcCCCCCee--eehhhhhCCcc
Confidence 55666654 433 2222 8999999999999999999974 553333211 0111 35776 567998 5678
Q ss_pred eeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHh----CC-c
Q 014724 321 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE----LG-Y 395 (419)
Q Consensus 321 gG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~----~G-~ 395 (419)
.|++++++ ++.+.+.......+.+++... .++...+++.+.. +.+.+++.++.+++.+.|++ .+ +
T Consensus 304 iG~v~~~~------~~~~~~~~~~~~~t~~~~~~~-~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 373 (451)
T 3oks_A 304 LSAVTGRA------EIMDSPHVSGLGGTYGGNPIA-CAAALATIETIES---EGLVARAQQIEKIMKDRLGRLQAEDDRI 373 (451)
T ss_dssp CEEEEEEH------HHHTCSCTTSBCCSSSSCHHH-HHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHHCTTE
T ss_pred eEEEEECH------HHHhhhcCCCcCCCCCCCHHH-HHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHHHhhCCCe
Confidence 89999887 676666543333333333333 3333335655432 23455566666666666655 22 2
Q ss_pred EEecCCCcceeEEEEeC
Q 014724 396 KLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 396 ~v~~~~t~~hlv~vd~~ 412 (419)
..+. ....++++++.
T Consensus 374 ~~~~--~~G~~~~~~~~ 388 (451)
T 3oks_A 374 GDVR--GRGAMIAMELV 388 (451)
T ss_dssp EEEE--EETTEEEEEEB
T ss_pred EEEE--EeeEEEEEEEe
Confidence 2222 12346777763
No 230
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.56 E-value=1.6e-13 Score=139.82 Aligned_cols=262 Identities=12% Similarity=0.063 Sum_probs=149.2
Q ss_pred ChHHHH-H-HHhh---hhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcC-CCCCCCceeEecCChHHHHHHHHHH
Q 014724 114 TSRAVM-E-AVGS---CLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN-LDENKWGVNVQPLSGSPANFEVYTA 187 (419)
Q Consensus 114 ~~~~V~-e-al~~---~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g-~~~~~~~v~V~~~sGt~A~~~~~~a 187 (419)
.+|.|+ + |+.+ .+... .. +. .++. .+...+ .+++++++++ .+.+ ..++++||++|++.++..
T Consensus 71 ~~p~v~~~~A~~~~~~~~~~~-~~-~~-~~~~--~~~~~~----la~~la~~~~~~~~~---~v~~~~~gseA~~~aik~ 138 (449)
T 2cjg_A 71 NPPALVDDREFHAELMQAALN-KP-SN-SDVY--SVAMAR----FVETFARVLGDPALP---HLFFVEGGALAVENALKA 138 (449)
T ss_dssp SCHHHHTCHHHHHHHHHHHTC-CC-CT-TTCC--CHHHHH----HHHHHHHHHCCTTCC---EEEEESSHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhc-CC-CC-cccC--CHHHHH----HHHHHHHhcCCCCCC---EEEEeCchHHHHHHHHHH
Confidence 479999 8 8888 55432 11 11 1221 222223 3467888886 3332 225566789999998865
Q ss_pred cc---C----------C-CCEEEEeCCCCCccccCcccccccccccccc------cc-----EEEecccCC--CC-----
Q 014724 188 IL---K----------P-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------YF-----ESMPYRLDE--ST----- 235 (419)
Q Consensus 188 ll---~----------p-GD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~------~~-----~~v~~~~~~--~~----- 235 (419)
+. . | ||+|++.++.|.+..... +...+. .+ .+..++.+. ..
T Consensus 139 a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 211 (449)
T 2cjg_A 139 AFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYT-------LSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMA 211 (449)
T ss_dssp HHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTG-------GGTCCSCHHHHTTSCCCCCCEECCCCCCTTCCHHHHH
T ss_pred HHHHhcccccccccccCCCCEEEEECCCcCCcccch-------hhhcCCchhhcccCCCCCCCcEEEcCCCchhhccccc
Confidence 43 2 2 899999998876643211 111111 01 233333321 00
Q ss_pred --CCCCHHHHHHHhhh--cCCeEEEEcCCCCC--CcCC----hHHHHHHHHHhCCEEEEeccccccccccCCcCCCC---
Q 014724 236 --GLVDYDMLEKTAIL--FRPKLIIAGASAYP--RDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF--- 302 (419)
Q Consensus 236 --~~iD~d~Le~~l~~--~~pklIi~~~s~~p--~~~d----l~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~--- 302 (419)
...|+++|++.+++ .++++|+++..+++ ...+ +++|+++|++||++||+|++|. |+...|.. ..+
T Consensus 212 ~~~~~~~~~le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~-g~g~~g~~-~~~~~~ 289 (449)
T 2cjg_A 212 ALEAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQT-GCGLTGTA-WAYQQL 289 (449)
T ss_dssp HHHHHHHHHHHHHHHHSTTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSS-STHHHH
T ss_pred hhhHHHHHHHHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEecccc-CCCccCcc-eeeccc
Confidence 02566779998863 36788888764443 2344 8999999999999999999985 54433321 111
Q ss_pred C-CCcEEEeCCCCcCCCCCeeEEEEeCCCcchhhHHHHhh-----hcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHH
Q 014724 303 K-YCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAIN-----NAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQ 376 (419)
Q Consensus 303 ~-~~Div~~S~hK~l~GprgG~i~~~~~~~~~~~l~~~i~-----~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~ 376 (419)
+ ..|+++ ++|+| +.|++++++ ++.+.+. ......+.++ +....++...+++.+.+ +.+.
T Consensus 290 ~~~~di~t--~sK~l---~iG~~~~~~------~~~~~l~~~~~~~~~~~~t~~~-n~~~~~aa~aal~~~~~---~~~~ 354 (449)
T 2cjg_A 290 DVAPDIVA--FGKKT---QVCGVMAGR------RVDEVADNVFAVPSRLNSTWGG-NLTDMVRARRILEVIEA---EGLF 354 (449)
T ss_dssp TCCCSEEE--ECGGG---SSEEEEECG------GGGGSTTCTTTSTTSSCCSSSS-CHHHHHHHHHHHHHHHH---HTHH
T ss_pred CCCceEEE--ecCcc---cEEEEEECH------HHhhhhhhcccCCcccccCCCC-CHHHHHHHHHHHHHHHh---ccHH
Confidence 1 457764 56998 578888877 4444321 1111122222 23333444446665432 3456
Q ss_pred HHHHHHHHHHHHHHHhC-----C-cEEecCCCcceeEEEEeCC
Q 014724 377 NKVVSNCRALASRLVEL-----G-YKLVSGGSDNHLVLVDLRP 413 (419)
Q Consensus 377 ~~v~~n~~~l~~~L~~~-----G-~~v~~~~t~~hlv~vd~~~ 413 (419)
+++.++++++.+.|+++ + +..+. ....++++++..
T Consensus 355 ~~~~~~~~~l~~~L~~l~~~~~~~~~~~~--~~g~~~~~~~~~ 395 (449)
T 2cjg_A 355 ERAVQHGKYLRARLDELAADFPAVVLDPR--GRGLMCAFSLPT 395 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSTTTSEEEE--EETTEEEEECSS
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCceeeEe--eccEEEEEEECC
Confidence 77788888999988764 2 33332 234567788754
No 231
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.08 E-value=3.5e-14 Score=145.44 Aligned_cols=253 Identities=14% Similarity=0.078 Sum_probs=144.2
Q ss_pred hhcccccccCCC-----ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcC-CCCCCCceeEecC
Q 014724 102 FKSLELIASENF-----TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN-LDENKWGVNVQPL 175 (419)
Q Consensus 102 ~~~i~L~~sen~-----~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g-~~~~~~~v~V~~~ 175 (419)
++.|++..+... .+|.|++|+.+.+......+|+. +...+ ..++++++++ .+. .++++
T Consensus 100 ~~yiD~~~~~~~~~lGh~~p~V~~Av~~q~~~~~~~~~~~-------~~~~~----Lae~L~~~~p~~~~-----v~~~n 163 (465)
T 2yky_A 100 HAYVNFLGEYTAGLFGHSHPVIRAAVERALAVGLNLSTQT-------ENEAL----FAEAVCDRFPSIDL-----VRFTN 163 (465)
Confidence 345777665431 37999999988775432222221 21223 3467777774 322 25677
Q ss_pred ChHHHHHHHHHHcc--CCCCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhh--cC
Q 014724 176 SGSPANFEVYTAIL--KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL--FR 251 (419)
Q Consensus 176 sGt~A~~~~~~all--~pGD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~--~~ 251 (419)
||++|++.++.... ..+|+|++.+..+.|+.. +..+ . ....|.....+.++ ..|+++|++++++ .+
T Consensus 164 SGseA~~~Aik~ar~~tgr~~ii~~~~~yHG~~~-~~~s--g-~~~~g~~~~~~~~~------~~d~~~l~~~l~~~~~~ 233 (465)
T 2yky_A 164 SGTEANLMALATATAITGRKTVLAFDGGYHGGLL-NFAS--G-HAPTNAPYHVVLGV------YNDVEGTADLLKRHGHD 233 (465)
Confidence 89999999987652 356899998877655421 1000 0 00111100122222 1478899998874 36
Q ss_pred CeEEEEcCC--CCCCcC----ChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC-CCcEEEeCCCCcC-CCCCeeE
Q 014724 252 PKLIIAGAS--AYPRDF----DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSL-RGPRGGM 323 (419)
Q Consensus 252 pklIi~~~s--~~p~~~----dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~-~~Div~~S~hK~l-~GprgG~ 323 (419)
+++|+++.. +.+... .+++|+++|++||++||+|++|. +-.+.......+. ..|++ |++|++ .|++.|+
T Consensus 234 ~aavi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~g~~~a~~~~gv~pDi~--t~sK~lg~G~piG~ 310 (465)
T 2yky_A 234 CAAILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-SRLSGGGAQEMLGISADLT--TLGKYIGGGMSFGA 310 (465)
Confidence 788887652 223223 38999999999999999999987 4221100000111 24654 678998 4567899
Q ss_pred EEEeCCCcchhhHHHHhhh---c--ccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC
Q 014724 324 IFFKKDPVLGVELESAINN---A--VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVEL 393 (419)
Q Consensus 324 i~~~~~~~~~~~l~~~i~~---~--~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~~ 393 (419)
+++++ ++.+.+.. . ...++.++. ....++..++|+.+.+ +.+.+++.++.++|.+.|++.
T Consensus 311 v~~~~------~i~~~l~~~~~g~~~~~~T~~~n-pla~aAa~aaL~~l~~---~~~~~~~~~~~~~l~~~L~~~ 375 (465)
T 2yky_A 311 FGGRR------DLMERFDPARDGAFAHAGTFNNN-ILTMSAGHAALTQIYT---RQAASDLSASGDRFRANLNRI 375 (465)
Confidence 99887 46555543 1 111112222 1222232335655543 245677777788888888764
No 232
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.36 E-value=8.2e-11 Score=119.88 Aligned_cols=241 Identities=20% Similarity=0.132 Sum_probs=136.6
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHccC--C
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--P 191 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all~--p 191 (419)
-+|.|.+|+.+.+......+.+ +....+ ..+++++.+..-. ...+++||++|++.++..... .
T Consensus 104 ~hp~v~~Av~~q~~~~~~~~~~-------~~~~~~----lae~l~~~~p~~~----~v~f~~SGsEA~e~AiklAr~~tg 168 (454)
T 4ao9_A 104 SAPEIRDAVIEAMQGGINLTGH-------NLLEGR----LARLICERFPQIE----QLRFTNSGTEANLMALTAALHFTG 168 (454)
T ss_dssp CCHHHHHHHHHHHHTCSCCCSE-------ESSHHH----HHHHHHHHSTTCS----EEEEESSHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHhcCCCccCC-------cHHHHH----HHHHHHHhCCCCC----EEEEeCchHHHHHHHHHHHHhccc
Confidence 3799999998888643321111 121223 3356777774322 125667999999998865532 3
Q ss_pred CCEEEEeCCCCCccccCccccccccccccccccEEEecccCCCCCCCCHHHHHHHhhhcC--CeEEEEcC--CCCCCcC-
Q 014724 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFR--PKLIIAGA--SAYPRDF- 266 (419)
Q Consensus 192 GD~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~--pklIi~~~--s~~p~~~- 266 (419)
.++|+...-.|.|+. .+... ........+....++ ..|.+.+++.++++. ..+||+.. .+.+...
T Consensus 169 r~~ii~~~~~yHG~t-~~~~~---~~~~~~~~~~~~~~p------~nd~~~l~~~l~~~~~~iAavIvEPv~g~~G~~~p 238 (454)
T 4ao9_A 169 RRKIVVFSGGYHGGV-LGFGA---RPSPTTVPFDFLVLP------YNDAQTARAQIERHGPEIAVVLVEPMQGASGCIPG 238 (454)
T ss_dssp CCEEEEETTCBCSTT-CBBSS---SBCTTSCCSEEEEEC------TTCHHHHHHHHHHTGGGEEEEEECSEESTTTCEEC
T ss_pred CCeEEEEeCCcCCcc-ccccc---cccCccCCCCcccCC------CchHHHHHHHHhhcCCceEEEEeccccCCCCccCC
Confidence 467888776644432 11100 000111122333322 247899999987643 45677653 1223222
Q ss_pred ---ChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC-CCcEEEeCCCCcC-CCCCeeEEEEeCCCcchhhHHHHhh
Q 014724 267 ---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSL-RGPRGGMIFFKKDPVLGVELESAIN 341 (419)
Q Consensus 267 ---dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~-~~Div~~S~hK~l-~GprgG~i~~~~~~~~~~~l~~~i~ 341 (419)
-+++|+++|++||++||+||+|. |-++.......+. ..|+++ +.|.+ .|...|.+.+++ ++.+.+.
T Consensus 239 ~~~fL~~lr~lc~~~g~lLI~DEV~t-GR~G~~~a~e~~gv~PDi~t--~gK~lggG~Piga~~~~~------ei~~~~~ 309 (454)
T 4ao9_A 239 QPDFLQALRESATQVGALLVFDEVMT-SRLAPHGLANKLGIRSDLTT--LGKYIGGGMSFGAFGGRA------DVMALFD 309 (454)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECTTG-GGGSTTCHHHHHTCCCSEEE--EEGGGGTTSSCEEEEECH------HHHGGGC
T ss_pred chhhHHHHHHHHhhcCCEEEEECCCc-CCCccccchhccCCCCcEEE--eccccCCCCcceeeeeHH------HHHHHHh
Confidence 28999999999999999999985 6443211000011 358876 45888 455678888887 6776664
Q ss_pred hcccC----CCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHh
Q 014724 342 NAVFP----GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE 392 (419)
Q Consensus 342 ~~~~~----~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~ 392 (419)
....+ ++.++. +...+|..++|+.+.+++ ..+++.++.++|.+.|++
T Consensus 310 ~~~~~~~h~~T~~gn-Pla~AAala~L~~l~~~~---~~~~~~~~g~~l~~~L~~ 360 (454)
T 4ao9_A 310 PRTGPLAHSGTFNNN-VMTMAAGYAGLTKLFTPE---AAGALAERGEALRARLNA 360 (454)
T ss_dssp TTTCSCCCCCTTTTC-HHHHHHHHHHHHHTSCHH---HHHHHHHHHHHHHHHHHH
T ss_pred hccCCccccCCCCCC-HHHHHHHHHHHHHHhccC---hhHHHHHHHHHHHHHHHH
Confidence 32211 222222 223333334677766543 456677777788887765
No 233
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.33 E-value=2.5e-11 Score=124.53 Aligned_cols=263 Identities=14% Similarity=0.124 Sum_probs=143.9
Q ss_pred ChHHHHHHHhhhhhcc-CCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHcc---
Q 014724 114 TSRAVMEAVGSCLTNK-YSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 189 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~-y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all--- 189 (419)
.+|.|++|+.+.+... +..+. . + |+....++++.+.++++++++...+ ..++++||++|++.++..+.
T Consensus 80 ~~p~v~~A~~~~~~~~~~~~~~---~-~-~~~~~~~l~~~la~~l~~~~~~~~~---~v~f~~sGseA~~~Aik~a~~~~ 151 (472)
T 1ohv_A 80 SHPALVKLVQQPQNVSTFINRP---A-L-GILPPENFVEKLRESLLSVAPKGMS---QLITMACGSCSNENAFKTIFMWY 151 (472)
T ss_dssp TCHHHHHHHHCGGGHHHHHCCC---C-T-TTSCBTTHHHHHHHTGGGGCCTTCC---EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhccccccc---c-c-ccccHHHHHHHHHHHHHHhCCCCcC---EEEEeCCchhHHHHHHHHHHHHh
Confidence 4899999998875321 11111 0 1 1111124554455556666644432 23667789999999997663
Q ss_pred ----------------------CCC---CEEEEeCCCCCccccCccccccccccccccc-----------cEEEecccC-
Q 014724 190 ----------------------KPH---DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-----------FESMPYRLD- 232 (419)
Q Consensus 190 ----------------------~pG---D~Vl~~~~~~~g~~s~~~~~~~~~i~~~g~~-----------~~~v~~~~~- 232 (419)
+|| |+|++.++.+.|+.... +...|.. +..++++..
T Consensus 152 ~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~-------~~~~g~~~~~~~~~~~~~~~~~~~p~~~ 224 (472)
T 1ohv_A 152 RSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGC-------LATTHSKAIHKIDIPSFDWPIAPFPRLK 224 (472)
T ss_dssp HHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHH-------HHHCCSCHHHHTTSCCCCCCEECCCCCC
T ss_pred hhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHH-------HhcCCCccccccCCCCCCCcccCCCccc
Confidence 156 89999998765542111 1111110 011222110
Q ss_pred -C--CC-------CCCCHHHHHHHhhhc-----CCeEEEEcCCCC--CCcCC----hHHHHHHHHHhCCEEEEecccccc
Q 014724 233 -E--ST-------GLVDYDMLEKTAILF-----RPKLIIAGASAY--PRDFD----YPRMRQIADAVGALLMMDMAHISG 291 (419)
Q Consensus 233 -~--~~-------~~iD~d~Le~~l~~~-----~pklIi~~~s~~--p~~~d----l~~I~~ia~~~ga~livD~ah~~G 291 (419)
+ .. ...|+++|++.++++ ++++|+++..++ +...+ +++|+++|++||++||+|++|. |
T Consensus 225 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~-g 303 (472)
T 1ohv_A 225 YPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQT-G 303 (472)
T ss_dssp SSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTT-T
T ss_pred CccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEeCccc-C
Confidence 0 00 023789999998752 678888875333 33445 8999999999999999999984 5
Q ss_pred ccccCCcCCCCC--C----CcEEEeCCCCc-CCCCCeeEEEEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHH
Q 014724 292 LVAASVVADPFK--Y----CDVVTTTTHKS-LRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCL 364 (419)
Q Consensus 292 l~~~g~~~~~~~--~----~Div~~S~hK~-l~GprgG~i~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al 364 (419)
+...|.. ..++ + .|++ |++|+ ++ ||+++ ++ ++. .+......++.++ +...+++...+|
T Consensus 304 ~g~~g~~-~~~~~~gv~~~~Di~--t~sK~~l~---GG~~~-~~------~~~-~~~~~~~~~T~~~-~~~~~aaa~aal 368 (472)
T 1ohv_A 304 GGSTGKF-WAHEHWGLDDPADVM--TFSKKMMT---GGFFH-KE------EFR-PNAPYRIFNTWLG-DPSKNLLLAEVI 368 (472)
T ss_dssp TTTTSSS-SGGGGGCCSSCCSEE--EECGGGSS---EEEEE-CG------GGS-CSSSSSSCCSSSS-CHHHHHHHHHHH
T ss_pred CCCCCCc-hhccccCCCCCCCEE--EEcccccc---CCccC-ch------hhc-ccccccccCccCc-cHHHHHHHHHHH
Confidence 4332211 0111 2 6776 45698 44 58776 43 331 1111111222222 233344444566
Q ss_pred HHhcChHHHHHHHHHHHHHHHHHHHHHhC--Cc----EEecCCCcceeEEEEeC
Q 014724 365 KHAQSPEFKVYQNKVVSNCRALASRLVEL--GY----KLVSGGSDNHLVLVDLR 412 (419)
Q Consensus 365 ~~~~~~~~~~~~~~v~~n~~~l~~~L~~~--G~----~v~~~~t~~hlv~vd~~ 412 (419)
+.+.+ +.+.+++.+++++|.+.|++. ++ ..+. ....++++++.
T Consensus 369 ~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~v~~~~--~~g~~~~~~~~ 417 (472)
T 1ohv_A 369 NIIKR---EDLLSNAAHAGKVLLTGLLDLQARYPQFISRVR--GRGTFCSFDTP 417 (472)
T ss_dssp HHHHH---TTHHHHHHHHHHHHHHHHHHHHHHCTTTCEEEE--EETTEEEEECS
T ss_pred HHHHh---CCHHHHHHHHHHHHHHHHHHHHhhCCCcEEeec--CCceEEEEEeC
Confidence 65542 235677777888888888764 22 2122 23456677764
No 234
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.02 E-value=8.3e-08 Score=97.82 Aligned_cols=255 Identities=15% Similarity=0.099 Sum_probs=128.7
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHc--cCC
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKP 191 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~al--l~p 191 (419)
-+|+|.+|+.+.+.. ..+... +...++. .+ ...+++.+++..+..+ ..++++||++|++.++... ...
T Consensus 81 ~~p~v~~Ai~~q~~~-~~~~~~---~~~~~~~--~~--~lae~L~~~~p~~~~~--~v~f~~sGsEA~e~AlklAr~~t~ 150 (456)
T 4atq_A 81 SDPAVVAAVQEAAAH-FTHTCF---MVTPYEG--YV--AVTEQLNRLTPGDHAK--RTVLFNSGAEAVENAVKVARLATG 150 (456)
T ss_dssp TCHHHHHHHHHHHHH-CSCCTT---TTSCCHH--HH--HHHHHHHHHSSCSSCE--EEEEESSHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHhh-ccCccc---CccCcHH--HH--HHHHHHHHhCCCCCCc--EEEEeCChHHHHHHHHHHHhhhhc
Confidence 479999999887653 221110 1111221 22 2336677777543211 2246679999999888543 223
Q ss_pred CCEEEEeCCCCCccccCcccccc-cc------ccccccccEEEeccc--CCC-CCCCCHHHHHHHhh-------hcCCeE
Q 014724 192 HDRIMGLDLPHGGHLSHGFMTPK-RR------VSGTSIYFESMPYRL--DES-TGLVDYDMLEKTAI-------LFRPKL 254 (419)
Q Consensus 192 GD~Vl~~~~~~~g~~s~~~~~~~-~~------i~~~g~~~~~v~~~~--~~~-~~~iD~d~Le~~l~-------~~~pkl 254 (419)
..+|+...-.|.|.. .+..... .. ..-....+..+|++. ... ....+.+.+++.++ ..+...
T Consensus 151 r~~ii~~~~~yHG~t-~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~iAA 229 (456)
T 4atq_A 151 RDAVVAFDHAYHGRT-NLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAITMIEKQIGGDQVAA 229 (456)
T ss_dssp CCEEEEETTCCCCSS-HHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHHHHHHHHTCGGGEEE
T ss_pred CCeEEEEecccCCcc-ccccccccCccccccCCCCccccceecccccccccCCCcccHHHHHHHHHHHHHHhhcCCceEE
Confidence 468888876654431 0100000 00 000011122333321 111 11233444433332 234567
Q ss_pred EEEcCC--CCC----CcCChHHHHHHHHHhCCEEEEeccccccccccCCcC--CCCC-CCcEEEeCCCCcC-CCCCeeEE
Q 014724 255 IIAGAS--AYP----RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSL-RGPRGGMI 324 (419)
Q Consensus 255 Ii~~~s--~~p----~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~--~~~~-~~Div~~S~hK~l-~GprgG~i 324 (419)
||+..- +.+ ...-+++|+++|++||++||+||++ .|+...|... ..+. ..|+++.+ |.+ .|...|.+
T Consensus 230 vivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~-tG~GRtG~~~a~e~~gv~PDivt~g--K~lggg~P~~av 306 (456)
T 4atq_A 230 IIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQ-SGFCRTGEWFAVDHEGVVPDIITMA--KGIAGGLPLSAI 306 (456)
T ss_dssp EEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTT-TTTTTTSSSSGGGGTTCCCSEEEEC--GGGGTTSSCEEE
T ss_pred EEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccc-cccCCccccccccccCCCCchhhhh--hcccCcCCceee
Confidence 777531 112 2234899999999999999999997 4543222211 1112 46998765 888 44566777
Q ss_pred EEeCCCcchhhHHHHhhhcccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHh
Q 014724 325 FFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVSNCRALASRLVE 392 (419)
Q Consensus 325 ~~~~~~~~~~~l~~~i~~~~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~n~~~l~~~L~~ 392 (419)
++++ ++.+.+.......+.++... ..++..+.|+.+.+++ ..+++.+.-++|.+.|++
T Consensus 307 ~~~~------~i~~~~~~~~~~~Tf~gnpl-a~aaala~L~~i~~~~---l~~~~~~~g~~l~~~L~~ 364 (456)
T 4atq_A 307 TGRA------DLLDAVHPGGLGGTYGGNPV-ACAAALAAIDTMEQHD---LNGRARHIEELALGKLRE 364 (456)
T ss_dssp EEEH------HHHTTSCTTSSCCSSSSCHH-HHHHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHH
T ss_pred EecH------HHHhcccccCCCCCCCCChH-HHHhhHHHHHHHhhcc---HHHHHHHHHHHHHHHHHH
Confidence 7877 56665544333333333222 2333233566654333 345555556666666654
No 235
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=98.63 E-value=1.9e-06 Score=88.08 Aligned_cols=248 Identities=15% Similarity=0.096 Sum_probs=128.1
Q ss_pred ChHHHHHHHhhhhhccCCCCCCCCCCCC-chhHHHHHHHHHHHHHHHHcCCCCCCCceeEecCChHHHHHHHHHHcc---
Q 014724 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYG-GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 189 (419)
Q Consensus 114 ~~~~V~eal~~~l~~~y~~g~p~~r~~~-g~~~~~~lE~~~~~~la~~~g~~~~~~~v~V~~~sGt~A~~~~~~all--- 189 (419)
-+|+|.+|+.+.+..-.. +.. +++ -++ ..+ +..+++.++...+.+ -..+.+||++|++.++....
T Consensus 84 ~~p~v~~Ai~~q~~~l~~--~~~--~~~~~~~--~~~--~lAe~L~~~~p~~~~---~v~f~~sGsEA~e~AiKlAr~~~ 152 (473)
T 4e3q_A 84 DHKGLIDAAKAQYERFPG--YHA--FFGRMSD--QTV--MLSEKLVEVSPFDSG---RVFYTNSGSEANDTMVKMLWFLH 152 (473)
T ss_dssp CCHHHHHHHHHHHHHCCC--CCC--CTTEEEH--HHH--HHHHHHHHHSSCSSC---EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhccc--ccc--cccccCH--HHH--HHHHHHHhhCCCCcc---EEEEeCchHHHHHHHHHHHHHHH
Confidence 479999999887754211 100 111 112 122 234677788765432 12556789999999886432
Q ss_pred ----CCC-CEEEEeCCCCCccccCccccccccccccc-----------cccEEEecc----cCCCCCC-------CCHHH
Q 014724 190 ----KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTS-----------IYFESMPYR----LDESTGL-------VDYDM 242 (419)
Q Consensus 190 ----~pG-D~Vl~~~~~~~g~~s~~~~~~~~~i~~~g-----------~~~~~v~~~----~~~~~~~-------iD~d~ 242 (419)
+++ .+|+...-.|.|.. .+ .++..+ ..+..++++ ... .+. ...++
T Consensus 153 ~~~g~~~r~~ii~~~~~yHG~t-~~------a~s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~ 224 (473)
T 4e3q_A 153 AAEGKPQKRKILTRWNAYHGVT-AV------SASMTGKPYNSVFGLPLPGFVHLTCPHYWRYGE-EGETEEQFVARLARE 224 (473)
T ss_dssp HHTTCTTCCEEEEETTCCCCSS-HH------HHHHSCCGGGGGGTCSCTTEEEECCCCHHHHSC-TTCCHHHHHHHHHHH
T ss_pred HhcCCCCcceEEEeeceECCCc-cc------cccccccccccccCCCCCcccccCCCccccccc-ccchhhHHHHHHHHH
Confidence 233 46787765543321 00 001111 011222221 110 111 11345
Q ss_pred HHHHhhhc---CCeEEEEcCC--CCC----CcCChHHHHHHHHHhCCEEEEeccccccccccCCcC--CCCC-CCcEEEe
Q 014724 243 LEKTAILF---RPKLIIAGAS--AYP----RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTT 310 (419)
Q Consensus 243 Le~~l~~~---~pklIi~~~s--~~p----~~~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~--~~~~-~~Div~~ 310 (419)
+++.+.+. +..+||+..- +.+ ...-+++|+++|++||++||.||++ .|+.-.|... ..+. ..|+++.
T Consensus 225 l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~-tGfGRtG~~fa~e~~gv~PDi~t~ 303 (473)
T 4e3q_A 225 LEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVI-CGFGRTGNTWGCVTYDFTPDAIIS 303 (473)
T ss_dssp HHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTT-TSSSTTSSSCHHHHTTCCCSEEEE
T ss_pred HHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCcc-ccCCcccchhHHHhcCCCCChHHh
Confidence 56665543 3455666531 112 2234799999999999999999996 4543222110 0011 4688875
Q ss_pred CCCCcCC-C-CCeeEEEEeCCCcchhhHHHHhhhc-------ccCCCCCCChHHHHHHHHHHHHHhcChHHHHHHHHHHH
Q 014724 311 TTHKSLR-G-PRGGMIFFKKDPVLGVELESAINNA-------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKVVS 381 (419)
Q Consensus 311 S~hK~l~-G-prgG~i~~~~~~~~~~~l~~~i~~~-------~~~~~~g~p~~~~iaala~al~~~~~~~~~~~~~~v~~ 381 (419)
.|.+. | .+.|.+++++ ++.+.+... ...++.++ ++-..++....|+.+.++ ...+++.+
T Consensus 304 --~K~l~gG~~Pl~av~~~~------~i~~~~~~~~~~~~~~~hg~T~~G-npla~Aaala~L~~i~~~---~l~~~~~~ 371 (473)
T 4e3q_A 304 --SKNLTAGFFPMGAVILGP------ELSKRLETAIEAIEEFPHGFTASG-HPVGCAIALKAIDVVMNE---GLAENVRR 371 (473)
T ss_dssp --CGGGGTTSSCCEEEEECH------HHHHHHHHHHHHHSCCCCCCTTTT-CHHHHHHHHHHHHHHHHS---SHHHHHHH
T ss_pred --cccccCCCCCcccccccH------HHHHHhccccccccccccCCCCCC-Ccchhhhhhhhhhhhccc---cHHHHHHH
Confidence 59984 4 5777788887 566554321 11122222 222232323356555433 34566666
Q ss_pred HHHHHHHHHHhC
Q 014724 382 NCRALASRLVEL 393 (419)
Q Consensus 382 n~~~l~~~L~~~ 393 (419)
..++|.+.|+++
T Consensus 372 ~g~~l~~~L~~l 383 (473)
T 4e3q_A 372 LAPRFEERLKHI 383 (473)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 777888888763
No 236
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=98.42 E-value=4.8e-06 Score=90.85 Aligned_cols=91 Identities=11% Similarity=0.013 Sum_probs=58.0
Q ss_pred HHHHHHhhh-------cCCeEEEEcCC--CC-CCc----CChHHHHHHHHHhCCEEEEeccccccccccCCcCCCCC---
Q 014724 241 DMLEKTAIL-------FRPKLIIAGAS--AY-PRD----FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--- 303 (419)
Q Consensus 241 d~Le~~l~~-------~~pklIi~~~s--~~-p~~----~dl~~I~~ia~~~ga~livD~ah~~Gl~~~g~~~~~~~--- 303 (419)
+.|++.+++ .++.+||+... .. +.. .-+++|+++|++||++||+||+| .|+...|... .++
T Consensus 577 ~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~-tGfGRtG~~f-a~e~~g 654 (831)
T 4a0g_A 577 AYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVF-TGFWRLGVET-TTELLG 654 (831)
T ss_dssp HHHHHHC---------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTT-TTTTTTSBSS-THHHHS
T ss_pred HHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCc-cccccCCCch-hhHhcC
Confidence 567777752 23567777652 22 222 12799999999999999999996 4543222211 111
Q ss_pred -CCcEEEeCCCCcCCC--CCeeEEEEeCCCcchhhHHHHhh
Q 014724 304 -YCDVVTTTTHKSLRG--PRGGMIFFKKDPVLGVELESAIN 341 (419)
Q Consensus 304 -~~Div~~S~hK~l~G--prgG~i~~~~~~~~~~~l~~~i~ 341 (419)
..|+++ ++|.|+| .+.|++++++ ++.+.+.
T Consensus 655 v~PDiit--lsK~L~gG~~Plgav~~~~------~i~~~~~ 687 (831)
T 4a0g_A 655 CKPDIAC--FAKLLTGGMVPLAVTLATD------AVFDSFS 687 (831)
T ss_dssp SCCSEEE--ECGGGGTTSSCCEEEEECH------HHHHTTC
T ss_pred CCCcEEE--EecccccCccCcEEEEECH------HHHHHHh
Confidence 357774 7799955 4778888887 6777664
No 237
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=53.61 E-value=15 Score=31.09 Aligned_cols=52 Identities=13% Similarity=-0.020 Sum_probs=37.2
Q ss_pred ccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCCcCChHHHHHHHHHhC
Q 014724 223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG 279 (419)
Q Consensus 223 ~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~~~dl~~I~~ia~~~g 279 (419)
+|+++.+.. ...++++.+.+.+.+|.+|.++....+....++++.+..++.+
T Consensus 46 G~eVi~lG~-----~~p~e~lv~aa~~~~~diV~lS~~~~~~~~~~~~~i~~L~~~g 97 (161)
T 2yxb_A 46 GFEVVYTGL-----RQTPEQVAMAAVQEDVDVIGVSILNGAHLHLMKRLMAKLRELG 97 (161)
T ss_dssp TCEEECCCS-----BCCHHHHHHHHHHTTCSEEEEEESSSCHHHHHHHHHHHHHHTT
T ss_pred CCEEEECCC-----CCCHHHHHHHHHhcCCCEEEEEeechhhHHHHHHHHHHHHhcC
Confidence 456665432 3788999988888899999888765555555677777777654
No 238
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=46.04 E-value=34 Score=29.88 Aligned_cols=59 Identities=8% Similarity=0.060 Sum_probs=40.8
Q ss_pred cccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCCcCChHHHHHHHHHhC----CEEEEe
Q 014724 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG----ALLMMD 285 (419)
Q Consensus 222 ~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~~~dl~~I~~ia~~~g----a~livD 285 (419)
.+++++.+.. .+..+++.+.+.+.+|.+|.++....+....++++.+..++.+ +.+++=
T Consensus 115 ~G~~v~~LG~-----~vp~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~l~~~~~~~~~~v~vG 177 (210)
T 1y80_A 115 GGFTVYNLGV-----DIEPGKFVEAVKKYQPDIVGMSALLTTTMMNMKSTIDALIAAGLRDRVKVIVG 177 (210)
T ss_dssp TTCEEEECCS-----SBCHHHHHHHHHHHCCSEEEEECCSGGGTHHHHHHHHHHHHTTCGGGCEEEEE
T ss_pred CCCEEEECCC-----CCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHhcCCCCCCeEEEE
Confidence 3457666543 4778999988888899999988765554445677777777755 555543
No 239
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=42.23 E-value=38 Score=27.11 Aligned_cols=46 Identities=9% Similarity=0.309 Sum_probs=30.3
Q ss_pred CCHHHHHHHhhh--------cCCeEEEEcCCCCCCcCChHHHHHHHHHhCCEEE
Q 014724 238 VDYDMLEKTAIL--------FRPKLIIAGASAYPRDFDYPRMRQIADAVGALLM 283 (419)
Q Consensus 238 iD~d~Le~~l~~--------~~pklIi~~~s~~p~~~dl~~I~~ia~~~ga~li 283 (419)
.|++.+.+.+.+ ++-.-|+++-+......|+++|.++++++|+.++
T Consensus 25 ~d~~~l~~~L~~ki~~aP~FF~~aPVVlDl~~l~~~~dl~~L~~~l~~~gl~~v 78 (120)
T 3ghf_A 25 AEPEVIRQALEDKIAQAPAFLKHAPVVINVSGLESPVNWPELHKIVTSTGLRII 78 (120)
T ss_dssp CCHHHHHHHHHHHHHHSHHHHTTCEEEEEEEECCSSCCHHHHHHHHHTTTCEEE
T ss_pred CCHHHHHHHHHHHHHhChHhhCCCcEEEEccccCChHHHHHHHHHHHHcCCEEE
Confidence 577777666543 1223455554333334689999999999998874
No 240
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=38.37 E-value=15 Score=36.22 Aligned_cols=28 Identities=14% Similarity=0.259 Sum_probs=25.8
Q ss_pred CCCCCcCChHHHHHHHHHhCCEEEEecc
Q 014724 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (419)
Q Consensus 260 s~~p~~~dl~~I~~ia~~~ga~livD~a 287 (419)
|.+++..|+++|++-||++|+.||+|.+
T Consensus 71 ~~~Gt~~df~~lv~~aH~~Gi~VilD~V 98 (496)
T 4gqr_A 71 TRSGNEDEFRNMVTRCNNVGVRIYVDAV 98 (496)
T ss_dssp BTTBCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 5677888999999999999999999997
No 241
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=37.97 E-value=24 Score=28.74 Aligned_cols=53 Identities=21% Similarity=0.260 Sum_probs=36.3
Q ss_pred cccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCCcCChHHHHHHHHHhC
Q 014724 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG 279 (419)
Q Consensus 222 ~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~~~dl~~I~~ia~~~g 279 (419)
.+|+++.+.. ...++++.+.+.+.++++|.++....+....++++.+..++.|
T Consensus 30 ~G~~Vi~lG~-----~~p~e~~v~~a~~~~~d~v~lS~~~~~~~~~~~~~i~~l~~~g 82 (137)
T 1ccw_A 30 AGFNVVNIGV-----LSPQELFIKAAIETKADAILVSSLYGQGEIDCKGLRQKCDEAG 82 (137)
T ss_dssp TTCEEEEEEE-----EECHHHHHHHHHHHTCSEEEEEECSSTHHHHHTTHHHHHHHTT
T ss_pred CCCEEEECCC-----CCCHHHHHHHHHhcCCCEEEEEecCcCcHHHHHHHHHHHHhcC
Confidence 3467766543 3678999888888899999888766544444566666666654
No 242
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=35.33 E-value=58 Score=29.87 Aligned_cols=52 Identities=10% Similarity=0.171 Sum_probs=38.0
Q ss_pred ccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCC---CcCChHHHHHHHHHhC
Q 014724 223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP---RDFDYPRMRQIADAVG 279 (419)
Q Consensus 223 ~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p---~~~dl~~I~~ia~~~g 279 (419)
+|+++.+.. .+.++++.+.+.+.++.+|.++....+ ....++++.+.+++.|
T Consensus 157 G~eVi~LG~-----~vp~e~iv~aa~e~~~d~VglS~l~t~~~~~~~~~~~~i~~L~~~g 211 (262)
T 1xrs_B 157 MIDAYNLGS-----QVANEDFIKKAVELEADVLLVSQTVTQKNVHIQNMTHLIELLEAEG 211 (262)
T ss_dssp TEEEEECCS-----SBCHHHHHHHHHHTTCSEEEEECCCCTTSHHHHHHHHHHHHHHHTT
T ss_pred CcEEEECCC-----CCCHHHHHHHHHHcCCCEEEEEeecCCccchHHHHHHHHHHHHhcC
Confidence 467776543 478899988888889999999876665 3445667777777765
No 243
>2ab1_A Hypothetical protein; HS.95870, DUF498, structural genomics, protein structure INI PSI, center for eukaryotic structural genomics, CESG; 2.59A {Homo sapiens} SCOP: c.103.1.1 PDB: 2q4q_A
Probab=33.18 E-value=90 Score=24.92 Aligned_cols=50 Identities=6% Similarity=-0.134 Sum_probs=37.3
Q ss_pred CCCHHHHHHHhhhcCCeEEEEcCCCCCCcCChHHHHHHHHHhCCEEEEecc
Q 014724 237 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMA 287 (419)
Q Consensus 237 ~iD~d~Le~~l~~~~pklIi~~~s~~p~~~dl~~I~~ia~~~ga~livD~a 287 (419)
.++.++++.+++. +|.+|+++.-.......-+++.+..+++|+-+-+-..
T Consensus 48 ~l~~~~l~~ll~~-~~evliiGtG~~~~~~~~~~~~~~l~~~gI~ve~m~T 97 (122)
T 2ab1_A 48 GVQPADVKEVVEK-GVQTLVIGRGMSEALKVPSSTVEYLKKHGIDVRVLQT 97 (122)
T ss_dssp CCCHHHHHHHHTT-CCSEEEEEECSSCCSCCCHHHHHHHHHTTCEEEEECH
T ss_pred HCCHHHHHHHhhC-CCCEEEECCCCCCccCCCHHHHHHHHHcCCEEEEeCH
Confidence 4888999998874 7999999875555432447888888999987665444
No 244
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=32.31 E-value=23 Score=34.83 Aligned_cols=28 Identities=14% Similarity=0.376 Sum_probs=23.8
Q ss_pred CCCCCcCChHHHHHHHHHhCCEEEEecc
Q 014724 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (419)
Q Consensus 260 s~~p~~~dl~~I~~ia~~~ga~livD~a 287 (419)
|.+++..|++++++-||++|+.||.|.+
T Consensus 64 p~~Gt~~df~~lv~~aH~~Gi~VilD~V 91 (441)
T 1lwj_A 64 AEYGSEREFKEMIEAFHDSGIKVVLDLP 91 (441)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 4566677899999999999999999987
No 245
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=31.76 E-value=22 Score=35.04 Aligned_cols=28 Identities=18% Similarity=0.129 Sum_probs=25.4
Q ss_pred CCCCCcCChHHHHHHHHHhCCEEEEecc
Q 014724 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (419)
Q Consensus 260 s~~p~~~dl~~I~~ia~~~ga~livD~a 287 (419)
|.+++..|+++|++-||++|+-||.|.+
T Consensus 59 p~~Gt~~dfk~Lv~~aH~~Gi~VilD~V 86 (448)
T 1g94_A 59 SRGGNRAQFIDMVNRCSAAGVDIYVDTL 86 (448)
T ss_dssp BTTBCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 5677788999999999999999999997
No 246
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=31.18 E-value=99 Score=23.59 Aligned_cols=52 Identities=12% Similarity=-0.034 Sum_probs=33.9
Q ss_pred CCCCHHHHHHHhhhcCCeEEEEcCCCC--CCc----CChHHHHHHHHHhCC-EEEEecc
Q 014724 236 GLVDYDMLEKTAILFRPKLIIAGASAY--PRD----FDYPRMRQIADAVGA-LLMMDMA 287 (419)
Q Consensus 236 ~~iD~d~Le~~l~~~~pklIi~~~s~~--p~~----~dl~~I~~ia~~~ga-~livD~a 287 (419)
..-|++.|+++++++++..||++.|-+ ++. ....++++..++.++ +.++||-
T Consensus 36 ~~~~~~~l~~li~e~~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~~lpV~~~DER 94 (98)
T 1iv0_A 36 LEEDVEALLDFVRREGLGKLVVGLPLRTDLKESAQAGKVLPLVEALRARGVEVELWDER 94 (98)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEECCCCCCSSSCCCSSTTHHHHHHHHHTTCEEEEECCS
T ss_pred cHHHHHHHHHHHHHcCCCEEEEeeccCCCCCcCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 346789999999988999999997743 222 234454444333354 4567874
No 247
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=30.55 E-value=24 Score=35.14 Aligned_cols=28 Identities=7% Similarity=0.036 Sum_probs=25.4
Q ss_pred CCCCCcCChHHHHHHHHHhCCEEEEecc
Q 014724 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (419)
Q Consensus 260 s~~p~~~dl~~I~~ia~~~ga~livD~a 287 (419)
|.+++..|+++|++-||++|+-||.|.+
T Consensus 73 ~~~Gt~~df~~lv~~aH~~Gi~VilD~V 100 (483)
T 3bh4_A 73 TKYGTKSELQDAIGSLHSRNVQVYGDVV 100 (483)
T ss_dssp CSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 5667788999999999999999999987
No 248
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=29.90 E-value=54 Score=24.11 Aligned_cols=44 Identities=16% Similarity=0.053 Sum_probs=31.5
Q ss_pred HHHHHHHhhhcCCeEEEEcCCCCCCcCChHHHHHHHHHhCCEEEEe
Q 014724 240 YDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMD 285 (419)
Q Consensus 240 ~d~Le~~l~~~~pklIi~~~s~~p~~~dl~~I~~ia~~~ga~livD 285 (419)
.++..+.+++.+.++|++.....| .-...|..+|+++++.++.-
T Consensus 16 ~~~v~kai~~gkaklViiA~D~~~--~~~~~i~~lc~~~~Ip~~~v 59 (82)
T 3v7e_A 16 TKQTVKALKRGSVKEVVVAKDADP--ILTSSVVSLAEDQGISVSMV 59 (82)
T ss_dssp HHHHHHHHTTTCEEEEEEETTSCH--HHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHcCCeeEEEEeCCCCH--HHHHHHHHHHHHcCCCEEEE
Confidence 466777787767888888654333 23578899999999877653
No 249
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=29.84 E-value=26 Score=35.18 Aligned_cols=28 Identities=18% Similarity=0.198 Sum_probs=23.9
Q ss_pred CCCCCcCChHHHHHHHHHhCCEEEEecc
Q 014724 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (419)
Q Consensus 260 s~~p~~~dl~~I~~ia~~~ga~livD~a 287 (419)
|.+++..|+++|++-||+.|+.||.|.+
T Consensus 74 p~~Gt~~dfk~Lv~~aH~~Gi~VilD~V 101 (549)
T 4aie_A 74 PQYGTMADMDELISKAKEHHIKIVMDLV 101 (549)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 4566677899999999999999999987
No 250
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=29.83 E-value=26 Score=34.92 Aligned_cols=28 Identities=11% Similarity=0.063 Sum_probs=25.3
Q ss_pred CCCCCcCChHHHHHHHHHhCCEEEEecc
Q 014724 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (419)
Q Consensus 260 s~~p~~~dl~~I~~ia~~~ga~livD~a 287 (419)
|.+++..|+++|++-||++|+-||.|.+
T Consensus 77 p~~Gt~~df~~Lv~~aH~~Gi~VilD~V 104 (485)
T 1wpc_A 77 TKYGTRSQLQAAVTSLKNNGIQVYGDVV 104 (485)
T ss_dssp CSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 5677788999999999999999999987
No 251
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=29.40 E-value=27 Score=34.77 Aligned_cols=28 Identities=11% Similarity=0.044 Sum_probs=25.3
Q ss_pred CCCCCcCChHHHHHHHHHhCCEEEEecc
Q 014724 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (419)
Q Consensus 260 s~~p~~~dl~~I~~ia~~~ga~livD~a 287 (419)
|.+++..|+++|++-||++|+-||.|.+
T Consensus 75 p~~Gt~~df~~lv~~aH~~Gi~VilD~V 102 (480)
T 1ud2_A 75 TKYGTKAQLERAIGSLKSNDINVYGDVV 102 (480)
T ss_dssp CSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 4577788999999999999999999987
No 252
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=28.85 E-value=27 Score=35.15 Aligned_cols=28 Identities=25% Similarity=0.345 Sum_probs=25.5
Q ss_pred CCCCCcCChHHHHHHHHHhCCEEEEecc
Q 014724 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (419)
Q Consensus 260 s~~p~~~dl~~I~~ia~~~ga~livD~a 287 (419)
|.+++..|++++++-||++|+.||.|.+
T Consensus 76 p~~Gt~~dfk~Lv~~aH~~Gi~VilD~V 103 (515)
T 1hvx_A 76 TKYGTKAQYLQAIQAAHAAGMQVYADVV 103 (515)
T ss_dssp CSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 5677788999999999999999999987
No 253
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=28.74 E-value=28 Score=34.55 Aligned_cols=28 Identities=21% Similarity=0.311 Sum_probs=24.9
Q ss_pred CCCCCcCChHHHHHHHHHhCCEEEEecc
Q 014724 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (419)
Q Consensus 260 s~~p~~~dl~~I~~ia~~~ga~livD~a 287 (419)
|.+++..|++++++-||++|+-||.|.+
T Consensus 92 p~~Gt~~df~~lv~~~H~~Gi~VilD~V 119 (478)
T 2guy_A 92 ENYGTADDLKALSSALHERGMYLMVDVV 119 (478)
T ss_dssp TTSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 5667778899999999999999999987
No 254
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=28.57 E-value=28 Score=33.85 Aligned_cols=28 Identities=14% Similarity=0.207 Sum_probs=25.1
Q ss_pred CCCCCcCChHHHHHHHHHhCCEEEEecc
Q 014724 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (419)
Q Consensus 260 s~~p~~~dl~~I~~ia~~~ga~livD~a 287 (419)
|.+++..|++++++-||++|+-||.|.+
T Consensus 63 ~~~Gt~~d~~~lv~~~h~~Gi~VilD~V 90 (405)
T 1ht6_A 63 SKYGNAAELKSLIGALHGKGVQAIADIV 90 (405)
T ss_dssp CTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 5667778999999999999999999987
No 255
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=28.53 E-value=29 Score=35.15 Aligned_cols=28 Identities=14% Similarity=0.272 Sum_probs=25.6
Q ss_pred CCCCCcCChHHHHHHHHHhCCEEEEecc
Q 014724 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (419)
Q Consensus 260 s~~p~~~dl~~I~~ia~~~ga~livD~a 287 (419)
|.+++..|+++|++-||++|+-||.|.+
T Consensus 87 p~~Gt~~dfk~Lv~~aH~~GI~VilD~V 114 (527)
T 1gcy_A 87 GRYGSDAQLRQAASALGGAGVKVLYDVV 114 (527)
T ss_dssp SSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 6777888999999999999999999987
No 256
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=28.38 E-value=58 Score=28.71 Aligned_cols=54 Identities=7% Similarity=-0.029 Sum_probs=38.9
Q ss_pred ccccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEE--cCCCCCCcCChHHHHHHHHHhC
Q 014724 221 SIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIA--GASAYPRDFDYPRMRQIADAVG 279 (419)
Q Consensus 221 g~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~--~~s~~p~~~dl~~I~~ia~~~g 279 (419)
..+|+++.+.. .+.++++.+.+.+++|++|.+ +....++...++++.+..++.|
T Consensus 118 ~~G~~Vi~LG~-----~vp~e~iv~~~~~~~~d~v~l~~S~l~~~~~~~~~~~i~~l~~~~ 173 (215)
T 3ezx_A 118 ANGFQIVDLGV-----DVLNENVVEEAAKHKGEKVLLVGSALMTTSMLGQKDLMDRLNEEK 173 (215)
T ss_dssp HTSCEEEECCS-----SCCHHHHHHHHHHTTTSCEEEEEECSSHHHHTHHHHHHHHHHHTT
T ss_pred HCCCeEEEcCC-----CCCHHHHHHHHHHcCCCEEEEEchhcccCcHHHHHHHHHHHHHcC
Confidence 34467776543 377899988888889999988 6554444455788888888765
No 257
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=27.69 E-value=30 Score=34.02 Aligned_cols=28 Identities=21% Similarity=0.319 Sum_probs=25.1
Q ss_pred CCCCCcCChHHHHHHHHHhCCEEEEecc
Q 014724 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (419)
Q Consensus 260 s~~p~~~dl~~I~~ia~~~ga~livD~a 287 (419)
|.+++..|++++++-||++|+-||.|.+
T Consensus 81 ~~~Gt~~df~~lv~~~H~~Gi~VilD~V 108 (435)
T 1mxg_A 81 TRFGSKEELVRLIQTAHAYGIKVIADVV 108 (435)
T ss_dssp CSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 5667778999999999999999999987
No 258
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=26.34 E-value=27 Score=34.78 Aligned_cols=28 Identities=18% Similarity=0.361 Sum_probs=24.2
Q ss_pred CCCCCcCChHHHHHHHHHhCCEEEEecc
Q 014724 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (419)
Q Consensus 260 s~~p~~~dl~~I~~ia~~~ga~livD~a 287 (419)
|.+++..|+++|++-||++|+.||.|.+
T Consensus 76 p~~Gt~~d~~~Lv~~aH~~Gi~VilD~V 103 (488)
T 1wza_A 76 PDYGTLEDFHKLVEAAHQRGIKVIIDLP 103 (488)
T ss_dssp GGGCCHHHHHHHHHHHHHTTCEEEEECC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 4566677899999999999999999987
No 259
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=25.76 E-value=28 Score=34.49 Aligned_cols=28 Identities=14% Similarity=0.195 Sum_probs=23.0
Q ss_pred CCCCCcCChHHHHHHHHHhCCEEEEecc
Q 014724 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (419)
Q Consensus 260 s~~p~~~dl~~I~~ia~~~ga~livD~a 287 (419)
|.+++..|++++++-||++|+-||.|.+
T Consensus 91 p~~Gt~~df~~lv~~~h~~Gi~VilD~V 118 (475)
T 2z1k_A 91 PILGGNEALRHLLEVAHAHGVRVILDGV 118 (475)
T ss_dssp GGGTCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 4456667888999999999999999986
No 260
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=25.56 E-value=1.4e+02 Score=23.58 Aligned_cols=42 Identities=10% Similarity=0.144 Sum_probs=30.6
Q ss_pred HHHHHHHhhhcCCeEEEEcCCCCCCcCC-hHHHHHHHHHhCCEEE
Q 014724 240 YDMLEKTAILFRPKLIIAGASAYPRDFD-YPRMRQIADAVGALLM 283 (419)
Q Consensus 240 ~d~Le~~l~~~~pklIi~~~s~~p~~~d-l~~I~~ia~~~ga~li 283 (419)
..+..+.++..+.++|++..-..| .+ ...|..+|+++|+.++
T Consensus 25 ~~~v~kai~~gkakLViiA~D~~~--~~~~~~l~~lc~~~~VP~~ 67 (121)
T 2lbw_A 25 VKEVVKALRKGEKGLVVIAGDIWP--ADVISHIPVLCEDHSVPYI 67 (121)
T ss_dssp HHHHHHHHHHSCCCEEEECTTCSC--TTHHHHHHHHHHHTCCCEE
T ss_pred HHHHHHHHHcCCceEEEEeCCCCH--HHHHHHHHHHHHhcCCcEE
Confidence 456677777778899988753333 23 5778899999998864
No 261
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=25.28 E-value=30 Score=34.39 Aligned_cols=28 Identities=21% Similarity=0.315 Sum_probs=24.7
Q ss_pred CCCCCcCChHHHHHHHHHhCCEEEEecc
Q 014724 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (419)
Q Consensus 260 s~~p~~~dl~~I~~ia~~~ga~livD~a 287 (419)
|.+++..|++++++-||++|+-||.|.+
T Consensus 92 ~~~Gt~~df~~lv~~~H~~Gi~VilD~V 119 (484)
T 2aaa_A 92 SNFGTADNLKSLSDALHARGMYLMVDVV 119 (484)
T ss_dssp TTTCCHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 5667778899999999999999999987
No 262
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=25.23 E-value=30 Score=33.96 Aligned_cols=27 Identities=15% Similarity=0.290 Sum_probs=15.0
Q ss_pred CCCCcCChHHHHHHHHHhCCEEEEecc
Q 014724 261 AYPRDFDYPRMRQIADAVGALLMMDMA 287 (419)
Q Consensus 261 ~~p~~~dl~~I~~ia~~~ga~livD~a 287 (419)
.+++..|++++.+-||++|+-||.|.+
T Consensus 77 ~~Gt~~d~~~lv~~ah~~Gi~vilD~V 103 (424)
T 2dh2_A 77 NFGSKEDFDSLLQSAKKKSIRVILDLT 103 (424)
T ss_dssp GGCCHHHHHHHHHHHHHTTCEEEEECC
T ss_pred cCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 344445555555556666666666654
No 263
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=25.13 E-value=1.6e+02 Score=26.15 Aligned_cols=48 Identities=17% Similarity=0.077 Sum_probs=35.6
Q ss_pred CHHHHHHHhhhcCCeEEEEcCCCCCCcCChHHHHHHHHHhCCEEEEecc
Q 014724 239 DYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMA 287 (419)
Q Consensus 239 D~d~Le~~l~~~~pklIi~~~s~~p~~~dl~~I~~ia~~~ga~livD~a 287 (419)
+++++++++. .....|+++...-.....++++.+.++++|..+++|..
T Consensus 90 ~~~~i~~~~~-~Gad~V~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v~ 137 (232)
T 3igs_A 90 FLDDVDALAQ-AGAAIIAVDGTARQRPVAVEALLARIHHHHLLTMADCS 137 (232)
T ss_dssp SHHHHHHHHH-HTCSEEEEECCSSCCSSCHHHHHHHHHHTTCEEEEECC
T ss_pred cHHHHHHHHH-cCCCEEEECccccCCHHHHHHHHHHHHHCCCEEEEeCC
Confidence 3567777665 47788887765433336789999999999999999864
No 264
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=25.05 E-value=88 Score=28.28 Aligned_cols=53 Identities=9% Similarity=0.094 Sum_probs=37.5
Q ss_pred cccEEEecccCCCCCCCCHHHHHHHhhhcCCeEEEEcCCCCCCcCChHHHHHHHHHhC
Q 014724 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG 279 (419)
Q Consensus 222 ~~~~~v~~~~~~~~~~iD~d~Le~~l~~~~pklIi~~~s~~p~~~dl~~I~~ia~~~g 279 (419)
.+++++.+..+ +.++++.+.+.+.+|.+|.++....+....++++.+..++.+
T Consensus 150 ~G~~Vi~LG~~-----vp~e~l~~~~~~~~~d~V~lS~l~~~~~~~~~~~i~~l~~~~ 202 (258)
T 2i2x_B 150 NGYNVVDLGRD-----VPAEEVLAAVQKEKPIMLTGTALMTTTMYAFKEVNDMLLENG 202 (258)
T ss_dssp TTCEEEEEEEE-----CCSHHHHHHHHHHCCSEEEEECCCTTTTTHHHHHHHHHHTTT
T ss_pred CCCEEEECCCC-----CCHHHHHHHHHHcCCCEEEEEeeccCCHHHHHHHHHHHHhcC
Confidence 34576665432 567888888887899999988766555556777777777654
No 265
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=25.01 E-value=1.6e+02 Score=26.07 Aligned_cols=48 Identities=21% Similarity=0.130 Sum_probs=35.6
Q ss_pred CHHHHHHHhhhcCCeEEEEcCCCCCCcCChHHHHHHHHHhCCEEEEecc
Q 014724 239 DYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMA 287 (419)
Q Consensus 239 D~d~Le~~l~~~~pklIi~~~s~~p~~~dl~~I~~ia~~~ga~livD~a 287 (419)
+.+++++++. .....|+++...-.....++++.+.++++|..+++|..
T Consensus 90 ~~~~i~~~~~-aGad~I~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v~ 137 (229)
T 3q58_A 90 YLQDVDALAQ-AGADIIAFDASFRSRPVDIDSLLTRIRLHGLLAMADCS 137 (229)
T ss_dssp SHHHHHHHHH-HTCSEEEEECCSSCCSSCHHHHHHHHHHTTCEEEEECS
T ss_pred cHHHHHHHHH-cCCCEEEECccccCChHHHHHHHHHHHHCCCEEEEecC
Confidence 3567777655 47788887765433336789999999999999999864
No 266
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=24.98 E-value=39 Score=25.26 Aligned_cols=20 Identities=10% Similarity=0.185 Sum_probs=18.1
Q ss_pred hHHHHHHHHHhCCEEEEecc
Q 014724 268 YPRMRQIADAVGALLMMDMA 287 (419)
Q Consensus 268 l~~I~~ia~~~ga~livD~a 287 (419)
-++|+++|+++|+.++.|..
T Consensus 29 A~~I~~~A~e~~VPi~e~~~ 48 (83)
T 3bzy_B 29 ALQIIKLAELYDIPVIEDIP 48 (83)
T ss_dssp HHHHHHHHHHTTCCEEECHH
T ss_pred HHHHHHHHHHcCCCEEeCHH
Confidence 37899999999999999985
No 267
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=24.62 E-value=36 Score=35.00 Aligned_cols=28 Identities=25% Similarity=0.356 Sum_probs=25.1
Q ss_pred CCCCCcCChHHHHHHHHHhCCEEEEecc
Q 014724 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (419)
Q Consensus 260 s~~p~~~dl~~I~~ia~~~ga~livD~a 287 (419)
|.+++..|+++|++-||++|+.||.|.+
T Consensus 193 p~~Gt~~df~~Lv~~aH~~Gi~VilD~V 220 (601)
T 3edf_A 193 PRYGSNEDFVRLSTEARKRGMGLIQDVV 220 (601)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCCHHHHHHHHHHHHHcCCEEEEEEC
Confidence 5667778999999999999999999997
No 268
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=24.41 E-value=37 Score=34.52 Aligned_cols=28 Identities=25% Similarity=0.336 Sum_probs=23.9
Q ss_pred CCCCCcCChHHHHHHHHHhCCEEEEecc
Q 014724 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (419)
Q Consensus 260 s~~p~~~dl~~I~~ia~~~ga~livD~a 287 (419)
|.+++..|+++|++-||++|+-||.|.+
T Consensus 74 p~~Gt~~df~~Lv~~aH~~Gi~VilD~V 101 (557)
T 1zja_A 74 KEYGTMEDFDRLMAELKKRGMRLMVDVV 101 (557)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 4566677899999999999999999987
No 269
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=23.95 E-value=38 Score=35.47 Aligned_cols=28 Identities=25% Similarity=0.388 Sum_probs=25.4
Q ss_pred CCCCCcCChHHHHHHHHHhCCEEEEecc
Q 014724 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (419)
Q Consensus 260 s~~p~~~dl~~I~~ia~~~ga~livD~a 287 (419)
|.+++..|+++|++-||++|+.||.|.+
T Consensus 106 p~~Gt~~df~~Lv~~aH~~GIkVilD~V 133 (680)
T 1cyg_A 106 PFFGTLSDFQRLVDAAHAKGIKVIIDFA 133 (680)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 5677788999999999999999999987
No 270
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=23.92 E-value=81 Score=30.21 Aligned_cols=57 Identities=16% Similarity=0.189 Sum_probs=38.8
Q ss_pred CCC-CCHHHHHHHhhh----cCCeEEEE-----cCCCCC-CcCChHHHHHHHHHhCCEEEEecccccc
Q 014724 235 TGL-VDYDMLEKTAIL----FRPKLIIA-----GASAYP-RDFDYPRMRQIADAVGALLMMDMAHISG 291 (419)
Q Consensus 235 ~~~-iD~d~Le~~l~~----~~pklIi~-----~~s~~p-~~~dl~~I~~ia~~~ga~livD~ah~~G 291 (419)
+|. .++++++..++. .++.++++ ++|+++ -..|+..|..+.+.++..++.|..|..|
T Consensus 220 ~G~~~tl~ei~~Ave~i~~~GN~~viLceRG~~typ~~~~~~vdl~ai~~lk~~~~lpVi~dssHs~G 287 (350)
T 1vr6_A 220 RGFMNTIEEFLLSAEYIANSGNTKIILCERGIRTFEKATRNTLDISAVPIIRKESHLPILVDPSHSGG 287 (350)
T ss_dssp CCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECHHHHHC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCeEEEEeCCCCCCCCcChhhhhHHHHHHHHHhhCCCEEEeCCCCCc
Confidence 454 478887766642 24577765 223332 2457888888887779999999999866
No 271
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=23.92 E-value=91 Score=29.83 Aligned_cols=90 Identities=16% Similarity=0.139 Sum_probs=57.9
Q ss_pred CCCCCHHHHHHHhh---hcCCeEEE-EcCCCCCC---cCChHHHHHHHHHh-CCEEEEeccccccccccCCcCCCCC-CC
Q 014724 235 TGLVDYDMLEKTAI---LFRPKLII-AGASAYPR---DFDYPRMRQIADAV-GALLMMDMAHISGLVAASVVADPFK-YC 305 (419)
Q Consensus 235 ~~~iD~d~Le~~l~---~~~pklIi-~~~s~~p~---~~dl~~I~~ia~~~-ga~livD~ah~~Gl~~~g~~~~~~~-~~ 305 (419)
+|.-++++++..++ .....+++ .|.+.||+ ..|+..|..+.+.+ ++.+ .|..|..|....- -.+. |+
T Consensus 155 tGmat~~Ei~~Ave~i~~~G~~iiLlhc~s~Yp~~~~~~nL~ai~~lk~~f~~lpV-g~sdHt~G~~~~~---AAvAlGA 230 (349)
T 2wqp_A 155 TGMNSIESIKKSVEIIREAGVPYALLHCTNIYPTPYEDVRLGGMNDLSEAFPDAII-GLSDHTLDNYACL---GAVALGG 230 (349)
T ss_dssp CTTCCHHHHHHHHHHHHHHTCCEEEEECCCCSSCCGGGCCTHHHHHHHHHCTTSEE-EEECCSSSSHHHH---HHHHHTC
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEeccCCCCCChhhcCHHHHHHHHHHCCCCCE-EeCCCCCcHHHHH---HHHHhCC
Confidence 45457888776653 22235554 46778875 35789999999998 8877 6788887732100 0011 78
Q ss_pred cEE--EeCCCCcCCCCCeeEEEEeC
Q 014724 306 DVV--TTTTHKSLRGPRGGMIFFKK 328 (419)
Q Consensus 306 Div--~~S~hK~l~GprgG~i~~~~ 328 (419)
|++ -++..|++.||.+..=+.++
T Consensus 231 ~iIEkH~tld~a~~G~D~~~SL~p~ 255 (349)
T 2wqp_A 231 SILERHFTDRMDRPGPDIVCSMNPD 255 (349)
T ss_dssp CEEEEEBCSCTTCCSTTGGGCBCHH
T ss_pred CEEEeCCCccccCCCCChhhhCCHH
Confidence 865 68889999888765433333
No 272
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=23.92 E-value=26 Score=34.77 Aligned_cols=28 Identities=11% Similarity=0.241 Sum_probs=24.8
Q ss_pred CCCCCcCChHHHHHHHHHhCCEEEEecc
Q 014724 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (419)
Q Consensus 260 s~~p~~~dl~~I~~ia~~~ga~livD~a 287 (419)
|.+++..|++++++-||++|+.||.|.+
T Consensus 69 p~~Gt~~d~~~lv~~~h~~Gi~VilD~V 96 (471)
T 1jae_A 69 TRSGDESAFTDMTRRCNDAGVRIYVDAV 96 (471)
T ss_dssp ETTEEHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 4566678899999999999999999987
No 273
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=23.89 E-value=38 Score=35.50 Aligned_cols=28 Identities=11% Similarity=0.170 Sum_probs=25.4
Q ss_pred CCCCCcCChHHHHHHHHHhCCEEEEecc
Q 014724 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (419)
Q Consensus 260 s~~p~~~dl~~I~~ia~~~ga~livD~a 287 (419)
|.+++..|+++|++-||++|+.||.|.+
T Consensus 102 p~~Gt~~df~~Lv~~aH~~GikVilD~V 129 (686)
T 1qho_A 102 EHFGNWTTFDTLVNDAHQNGIKVIVDFV 129 (686)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 5677788999999999999999999987
No 274
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=23.58 E-value=1e+02 Score=28.03 Aligned_cols=58 Identities=16% Similarity=0.189 Sum_probs=40.0
Q ss_pred CCC-CCHHHHHHHhhh----cCCeEEEE-----cCCCCCC-cCChHHHHHHHHHhCCEEEEeccccccc
Q 014724 235 TGL-VDYDMLEKTAIL----FRPKLIIA-----GASAYPR-DFDYPRMRQIADAVGALLMMDMAHISGL 292 (419)
Q Consensus 235 ~~~-iD~d~Le~~l~~----~~pklIi~-----~~s~~p~-~~dl~~I~~ia~~~ga~livD~ah~~Gl 292 (419)
+|. .+++++...++. .++.++++ +.++|+. ..|+..+..+.+..+..||.|..|..|.
T Consensus 137 ~G~~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~~~~v~L~ai~~lk~~~~~pVi~d~sH~~g~ 205 (262)
T 1zco_A 137 RGMGNTIQELLYSAEYIMAQGNENVILCERGIRTFETATRFTLDISAVPVVKELSHLPIIVDPSHPAGR 205 (262)
T ss_dssp CCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECSSTTTCS
T ss_pred cCCCCCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcChhhcCHHHHHHHHhhhCCCEEEEcCCCCCc
Confidence 444 488888777642 23566554 3356764 3578888888887799999999997663
No 275
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=23.56 E-value=39 Score=35.42 Aligned_cols=28 Identities=25% Similarity=0.341 Sum_probs=25.5
Q ss_pred CCCCCcCChHHHHHHHHHhCCEEEEecc
Q 014724 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (419)
Q Consensus 260 s~~p~~~dl~~I~~ia~~~ga~livD~a 287 (419)
|.+++..|+++|++-||++|+.||.|.+
T Consensus 110 p~~Gt~~dfk~Lv~~aH~~GI~VilD~V 137 (686)
T 1d3c_A 110 PAYGTIADFQNLIAAAHAKNIKVIIDFA 137 (686)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 5677788999999999999999999987
No 276
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=23.12 E-value=34 Score=33.63 Aligned_cols=27 Identities=22% Similarity=0.421 Sum_probs=23.6
Q ss_pred CCCCcCChHHHHHHHHHhCCEEEEecc
Q 014724 261 AYPRDFDYPRMRQIADAVGALLMMDMA 287 (419)
Q Consensus 261 ~~p~~~dl~~I~~ia~~~ga~livD~a 287 (419)
.+++..|+++|++-||++|+.||+|.+
T Consensus 79 ~~Gt~~~~~~lv~~~h~~Gi~vi~D~V 105 (449)
T 3dhu_A 79 EYGTLADFKALTDRAHELGMKVMLDIV 105 (449)
T ss_dssp GGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 455667899999999999999999987
No 277
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=22.80 E-value=29 Score=34.60 Aligned_cols=28 Identities=7% Similarity=0.077 Sum_probs=22.2
Q ss_pred CCCCCcCChHHHHHHHHHhCCEEEEecc
Q 014724 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (419)
Q Consensus 260 s~~p~~~dl~~I~~ia~~~ga~livD~a 287 (419)
|.+++..|+++|++-||++|+.||.|.+
T Consensus 97 p~~Gt~~df~~Lv~~aH~~Gi~VilD~V 124 (488)
T 2wc7_A 97 PMLGGNEAFKELLDAAHQRNIKVVLDGV 124 (488)
T ss_dssp GGGTHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 3455567888888888999999999886
No 278
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=22.73 E-value=41 Score=35.20 Aligned_cols=28 Identities=18% Similarity=0.256 Sum_probs=25.4
Q ss_pred CCCCCcCChHHHHHHHHHhCCEEEEecc
Q 014724 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (419)
Q Consensus 260 s~~p~~~dl~~I~~ia~~~ga~livD~a 287 (419)
|.+++..|+++|++-||++|+.||.|.+
T Consensus 111 p~~Gt~~dfk~Lv~~aH~~GikVilD~V 138 (683)
T 3bmv_A 111 PYFGSFTDFQNLINTAHAHNIKVIIDFA 138 (683)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 5677788999999999999999999987
No 279
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=22.73 E-value=83 Score=30.52 Aligned_cols=57 Identities=21% Similarity=0.361 Sum_probs=39.9
Q ss_pred CCC-CCHHHHHHHhhh----cCCeEEEE--cCCCCCC----cCChHHHHHHHHHhCCEEEEecccccc
Q 014724 235 TGL-VDYDMLEKTAIL----FRPKLIIA--GASAYPR----DFDYPRMRQIADAVGALLMMDMAHISG 291 (419)
Q Consensus 235 ~~~-iD~d~Le~~l~~----~~pklIi~--~~s~~p~----~~dl~~I~~ia~~~ga~livD~ah~~G 291 (419)
+|. -++++++..++. .+++++++ |.+.||+ ..|+..|..+.+..+..|++|.+|..|
T Consensus 256 ~G~~~t~~e~~~Ave~i~~~Gn~~i~L~~rG~s~yp~~~~~~ldl~~i~~lk~~~~lpV~~D~th~~G 323 (385)
T 3nvt_A 256 RGLSATIEEFIGAAEYIMSQGNGKIILCERGIRTYEKATRNTLDISAVPILKKETHLPVMVDVTHSTG 323 (385)
T ss_dssp CCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEEEHHHHHC
T ss_pred cCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCCccccCHHHHHHHHHhcCCCEEEcCCCCCC
Confidence 455 788888776643 23566654 2456654 357888888888889999999998755
No 280
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=21.96 E-value=36 Score=34.75 Aligned_cols=28 Identities=18% Similarity=0.217 Sum_probs=23.3
Q ss_pred CCCCCcCChHHHHHHHHHhCCEEEEecc
Q 014724 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (419)
Q Consensus 260 s~~p~~~dl~~I~~ia~~~ga~livD~a 287 (419)
|.+++..|+++|++-||++|+.||.|.+
T Consensus 87 p~~Gt~~df~~lv~~aH~~Gi~VilD~V 114 (570)
T 1m53_A 87 KEYGTMEDFDSLVAEMKKRNMRLMIDVV 114 (570)
T ss_dssp GGGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 3455667889999999999999999987
No 281
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=21.91 E-value=1.1e+02 Score=25.23 Aligned_cols=53 Identities=9% Similarity=0.003 Sum_probs=35.7
Q ss_pred CCCCHHHHHHHhhhcCCeEEEEcCCCC--CCcCC-h---HHHH-HHHHHhCC-EEEEeccc
Q 014724 236 GLVDYDMLEKTAILFRPKLIIAGASAY--PRDFD-Y---PRMR-QIADAVGA-LLMMDMAH 288 (419)
Q Consensus 236 ~~iD~d~Le~~l~~~~pklIi~~~s~~--p~~~d-l---~~I~-~ia~~~ga-~livD~ah 288 (419)
...+++.|.+++++++|..|+++.|-+ ++... . +.++ .++++.++ +.++||..
T Consensus 40 ~~~~~~~l~~li~~~~~~~ivVGlP~~~nGt~~~~~~~ar~f~~~L~~~~~lpV~~vDEr~ 100 (150)
T 1vhx_A 40 GDYGLSRLSELIKDYTIDKIVLGFPKNMNGTVGPRGEASQTFAKVLETTYNVPVVLWDERL 100 (150)
T ss_dssp TBCCHHHHHHHHTTSEEEEEEEECCCCBTTBCCHHHHHHHHHHHHHHHHHCSCEEEECCSS
T ss_pred hHHHHHHHHHHHHHcCCCEEEEeeeecCCcchhHHHHHHHHHHHHHHHhhCCCEEEecCCC
Confidence 467899999999999999999997643 33221 2 3333 34445564 56789973
No 282
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A*
Probab=21.91 E-value=45 Score=34.28 Aligned_cols=28 Identities=14% Similarity=0.273 Sum_probs=24.3
Q ss_pred CCCCCcCChHHHHHHHHHhCCEEEEecc
Q 014724 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (419)
Q Consensus 260 s~~p~~~dl~~I~~ia~~~ga~livD~a 287 (419)
|.+++..|+++|++-||++|+.||.|.+
T Consensus 82 ~~~Gt~~df~~lv~~~h~~Gi~VilD~V 109 (589)
T 3aj7_A 82 PTYGTNEDCFALIEKTHKLGMKFITDLV 109 (589)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 4566677899999999999999999987
No 283
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1
Probab=21.61 E-value=37 Score=34.53 Aligned_cols=28 Identities=18% Similarity=0.245 Sum_probs=23.8
Q ss_pred CCCCCcCChHHHHHHHHHhCCEEEEecc
Q 014724 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (419)
Q Consensus 260 s~~p~~~dl~~I~~ia~~~ga~livD~a 287 (419)
|.+++..|+++|++-||++|+.||.|.+
T Consensus 73 ~~~Gt~~df~~lv~~~h~~Gi~VilD~V 100 (558)
T 1uok_A 73 NEFGTMEDWDELLHEMHERNMKLMMDLV 100 (558)
T ss_dssp GGGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 3456667899999999999999999987
No 284
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=21.56 E-value=1.2e+02 Score=27.94 Aligned_cols=57 Identities=18% Similarity=0.295 Sum_probs=39.0
Q ss_pred CCC-CCHHHHHHHhhh----cCCeEEEE--cCCCC---CC-cCChHHHHHHHHHhCCEEEEecccccc
Q 014724 235 TGL-VDYDMLEKTAIL----FRPKLIIA--GASAY---PR-DFDYPRMRQIADAVGALLMMDMAHISG 291 (419)
Q Consensus 235 ~~~-iD~d~Le~~l~~----~~pklIi~--~~s~~---p~-~~dl~~I~~ia~~~ga~livD~ah~~G 291 (419)
+|. .++++++..++. .+++++++ |.++| +. ..|+..|..+.+.++..|+.|..|..|
T Consensus 152 ~G~~~t~~ei~~Ave~i~~~Gn~~i~L~~Rg~~~yp~y~~~~vdl~~i~~lk~~~~lpVi~dssH~~g 219 (276)
T 1vs1_A 152 RGFGNTVEELLAAAEYILLEGNWQVVLVERGIRTFEPSTRFTLDVAAVAVLKEATHLPVIVDPSHPAG 219 (276)
T ss_dssp CCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCBHHHHHHHHHHBSSCEEECCHHHHC
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCeEEEEeCCcCCCCCcCcchhCHHHHHHHHHHhCCCEEEeCCCCCC
Confidence 555 488888776642 23566654 33334 32 457888888877779999999999866
No 285
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=21.56 E-value=46 Score=34.13 Aligned_cols=28 Identities=11% Similarity=0.160 Sum_probs=23.7
Q ss_pred CCCCCcCChHHHHHHHHHhCCEEEEecc
Q 014724 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (419)
Q Consensus 260 s~~p~~~dl~~I~~ia~~~ga~livD~a 287 (419)
|.+++..|++++++-||++|+-||.|.+
T Consensus 217 p~~Gt~~df~~lv~~~H~~Gi~VilD~V 244 (588)
T 1j0h_A 217 PHFGDKETLKTLIDRCHEKGIRVMLDAV 244 (588)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 4566667889999999999999999986
No 286
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A
Probab=21.31 E-value=44 Score=34.49 Aligned_cols=28 Identities=7% Similarity=0.039 Sum_probs=25.3
Q ss_pred CCCCCcCChHHHHHHHHHhCCEEEEecc
Q 014724 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (419)
Q Consensus 260 s~~p~~~dl~~I~~ia~~~ga~livD~a 287 (419)
|.+++..|+++|++-||++|+.||.|.+
T Consensus 203 p~~Gt~~dfk~Lv~~aH~~GI~VilD~V 230 (599)
T 3bc9_A 203 TKYGTKGELENAIDALHNNDIKVYFDAV 230 (599)
T ss_dssp BTTBCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 5667778999999999999999999997
No 287
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP}
Probab=20.63 E-value=40 Score=34.27 Aligned_cols=28 Identities=14% Similarity=0.269 Sum_probs=22.7
Q ss_pred CCCCCcCChHHHHHHHHHhCCEEEEecc
Q 014724 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (419)
Q Consensus 260 s~~p~~~dl~~I~~ia~~~ga~livD~a 287 (419)
|.+++..|++++++-||++|+.||.|.+
T Consensus 73 ~~~Gt~~d~~~lv~~~h~~Gi~vilD~V 100 (555)
T 2ze0_A 73 DEFGTMDDFDELLAQAHRRGLKVILDLV 100 (555)
T ss_dssp GGGCCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 3455567888999999999999999987
No 288
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=20.42 E-value=1.5e+02 Score=24.18 Aligned_cols=53 Identities=21% Similarity=0.367 Sum_probs=35.1
Q ss_pred CCCCCHHHHHHHhhhcCCeEEEEcCCCC--CCcCCh-HHHHHH----HHHhC-CEEEEecc
Q 014724 235 TGLVDYDMLEKTAILFRPKLIIAGASAY--PRDFDY-PRMRQI----ADAVG-ALLMMDMA 287 (419)
Q Consensus 235 ~~~iD~d~Le~~l~~~~pklIi~~~s~~--p~~~dl-~~I~~i----a~~~g-a~livD~a 287 (419)
++..|++.|+++++++++..||+|.|-+ ++..+. +.+.++ .++.+ -+.++||-
T Consensus 37 ~~~~~~~~l~~li~e~~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~~~lpV~~~DER 97 (138)
T 1nu0_A 37 DGTPDWNIIERLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDER 97 (138)
T ss_dssp TTEECHHHHHHHHHHHCCSEEEEEEEECTTSCBCHHHHHHHHHHHHHHHHHCCCEEEEEEE
T ss_pred CcchHHHHHHHHHHHcCCCEEEEecccCCCcCcCHHHHHHHHHHHHHHHHhCCCEEEEcCC
Confidence 3457899999999998999999997643 343332 223333 33456 35678986
No 289
>3t7y_A YOP proteins translocation protein U; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta; 2.10A {Chlamydia trachomatis} SCOP: d.367.1.0
Probab=20.24 E-value=53 Score=25.32 Aligned_cols=20 Identities=20% Similarity=0.278 Sum_probs=18.1
Q ss_pred hHHHHHHHHHhCCEEEEecc
Q 014724 268 YPRMRQIADAVGALLMMDMA 287 (419)
Q Consensus 268 l~~I~~ia~~~ga~livD~a 287 (419)
-++|+++|+++|+.++.|..
T Consensus 44 A~~I~~~A~e~gVPi~e~~~ 63 (97)
T 3t7y_A 44 AKRIIAEAEKYGVPIMRNVP 63 (97)
T ss_dssp HHHHHHHHHHHTCCEEECHH
T ss_pred HHHHHHHHHHcCCeEEECHH
Confidence 37899999999999999985
Done!