Your job contains 1 sequence.
>014729
MRRTLLRNASLISRNLLHNPNHNQPFIPPLAASTRTQLRLYSSDSKDSSNDQRAPDPAPE
TALTAQTQKKDVSIDVEDVSNKELKMRIDKYFKGDEEALPSILEAILQRRLVGKHEETDD
ELTEELRLKPLDDVKDQEFESDFEELYATDEEIDDLYSARDHVVKKMVKDEYFNMDDKKW
DEMIGEAVQHGYLKDTRECEEILEDMLSWDKLLPDDMKKKVEQKFNELGDMCESGELEPE
QAYELFKKFEDEVVAEYMKQVETEEPPKYDFPAVPDTKKDIDDPPGEGPILRWVTRAVFA
PGGDAWHPKNRKVKMSVTVKELGLSKYQFRRLRELVGKRYHPGKDELTITSERFEHREEN
RKDCLRTLFSLIEEAGKANKMVDDARASYVKDRLRANPAFMERLRAKVLSSKGSNSIHA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 014729
(419 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2089653 - symbol:AT3G18240 "AT3G18240" species... 1381 3.4e-141 1
TAIR|locus:2119637 - symbol:AT4G21460 "AT4G21460" species... 1333 4.1e-136 1
SGD|S000002582 - symbol:RSM24 "Mitochondrial ribosomal pr... 135 3.3e-06 1
TAIR|locus:2027824 - symbol:AT1G73770 "AT1G73770" species... 124 8.4e-06 1
>TAIR|locus:2089653 [details] [associations]
symbol:AT3G18240 "AT3G18240" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] GO:GO:0005829 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005840 InterPro:IPR019349
Pfam:PF10213 EMBL:AP000414 UniGene:At.6712 ProtClustDB:CLSN2688523
UniGene:At.49389 EMBL:AF324661 EMBL:AF326907 EMBL:AF349520
EMBL:AY084282 EMBL:AK316694 IPI:IPI00525193 RefSeq:NP_566603.1
RefSeq:NP_850608.1 ProteinModelPortal:Q9LJQ6 STRING:Q9LJQ6
PRIDE:Q9LJQ6 EnsemblPlants:AT3G18240.1 EnsemblPlants:AT3G18240.2
GeneID:821352 KEGG:ath:AT3G18240 TAIR:At3g18240
HOGENOM:HOG000242901 InParanoid:Q9LJQ6 OMA:CERGELE PhylomeDB:Q9LJQ6
ArrayExpress:Q9LJQ6 Genevestigator:Q9LJQ6 Uniprot:Q9LJQ6
Length = 419
Score = 1381 (491.2 bits), Expect = 3.4e-141, P = 3.4e-141
Identities = 270/427 (63%), Positives = 332/427 (77%)
Query: 1 MRRTLLRNASLISRNLLHNPN--H----NQPFIPPLAASTRTQLRLYSSDSKDSSNDQRA 54
MR LLRNASL +R ++ +P H N PF+ P+AA + R +SS+S ++S
Sbjct: 1 MRGALLRNASLCARRIILSPRITHQISPNVPFLAPIAAPAAPKFRFFSSESGENSTT--- 57
Query: 55 PDPAPETALTAQTQKKDVSIDVEDVSNKELKMRIDKYF-KGDEEALPSILEAILQRRLVG 113
APE++ T +KKD+ VEDVSNKELK RI+KYF +G+E+ALP ++EA+LQRRLV
Sbjct: 58 ---APESSPTDSPEKKDLV--VEDVSNKELKSRIEKYFNEGNEDALPGVIEALLQRRLVD 112
Query: 114 KHXXXXXXXXXXXRLKPL-DDVKDQEFESDFEELYATDEEIDDLYSARDHVVKKMVKDEY 172
KH P DDVKD++FESDFEE ++TDEE++DLY++ ++V +KM K+E+
Sbjct: 113 KHAETDDELLEKIESLPFKDDVKDEDFESDFEEAHSTDEELEDLYNSPEYVAEKMRKNEF 172
Query: 173 FNMDDKKWDEMIGEAVQHGYLKDTRECEEILEDMLSWDKLLPDDMKKKVEQKFNELGDMC 232
FNMDDKKWD MI E +QHG L DT+ECEEILEDML WD+LLPDD+KKKVE KFNELGDMC
Sbjct: 173 FNMDDKKWDHMIREGIQHGCLTDTKECEEILEDMLKWDQLLPDDLKKKVEAKFNELGDMC 232
Query: 233 ESGELEPEQAYELFKKFEDEVVAEYMKQVETEEPPKYDFPAVPDTKKDIDDPPGEGPILR 292
E GE+E E AYELFK+FEDE+V +Y Q+E E PP++ D D+DDPPG+GPILR
Sbjct: 233 ERGEIEAEAAYELFKEFEDEMVIQYGDQMEAEGPPQFGETDASDRNTDLDDPPGKGPILR 292
Query: 293 WVTRAVFAPGGDAWHPKNRKVKMSVTVKELGLSKYQFRRLRELVGKRYHPGKDELTITSE 352
W +R VFAPGGDAWHPKNRKVKMSVTVKELGLSK+Q +RLRELVGKRYH GKDELTITSE
Sbjct: 293 WQSRIVFAPGGDAWHPKNRKVKMSVTVKELGLSKHQAKRLRELVGKRYHSGKDELTITSE 352
Query: 353 RFEHREENRKDCLRTLFSLIEEAGKANKMVDDARASYVKDRLRANPAFMERLRAKVLSSK 412
RFEHREENRKDCLRTL+ LIEEAGKANK+ +D R SYVK RLRANPAFM++L+AK++ SK
Sbjct: 353 RFEHREENRKDCLRTLYGLIEEAGKANKIAEDIRTSYVKQRLRANPAFMQKLQAKIIRSK 412
Query: 413 GSNSIHA 419
S++I+A
Sbjct: 413 ESDAINA 419
>TAIR|locus:2119637 [details] [associations]
symbol:AT4G21460 "AT4G21460" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0005840
InterPro:IPR019349 Pfam:PF10213 EMBL:AK175114 IPI:IPI00543974
RefSeq:NP_567628.2 UniGene:At.32629 UniGene:At.6712
UniGene:At.75035 ProteinModelPortal:Q683K3 STRING:Q683K3
PaxDb:Q683K3 ProMEX:Q683K3 EnsemblPlants:AT4G21460.1 GeneID:827418
KEGG:ath:AT4G21460 TAIR:At4g21460 eggNOG:NOG302873
InParanoid:Q683K3 PhylomeDB:Q683K3 ProtClustDB:CLSN2688523
Genevestigator:Q683K3 Uniprot:Q683K3
Length = 415
Score = 1333 (474.3 bits), Expect = 4.1e-136, P = 4.1e-136
Identities = 261/423 (61%), Positives = 323/423 (76%)
Query: 1 MRRTLLRNASLISRNLLHNP--NHNQPFIPPLAASTRTQLRLYSSDSKDSSNDQRAPDPA 58
MR L RNASL +R ++ + + N PF+ P+AA + R +SS+S ++S A
Sbjct: 1 MRGALFRNASLCARRIILSSRISPNVPFLTPIAAPAPPKFRFFSSESGENSTT------A 54
Query: 59 PETALTAQTQKKDVSIDVEDVSNKELKMRIDKYF-KGDEEALPSILEAILQRRLVGKHXX 117
E++ T + KKD+ VEDVSNKELK RIDK F +G+E+ALP ++EA+LQRRLV KH
Sbjct: 55 TESSPTDSSDKKDLV--VEDVSNKELKSRIDKSFNEGNEDALPGVIEALLQRRLVDKHAE 112
Query: 118 XXXXXXXXXRLKPL-DDVKDQEFESDFEELYATDEEIDDLYSARDHVVKKMVKDEYFNMD 176
P DDVKD++FESDFEE ++TDEE++DLY++ ++V +KM K E+FNMD
Sbjct: 113 TDDELMEKIESLPFKDDVKDEDFESDFEEAHSTDEELEDLYNSPEYVAEKMRKKEFFNMD 172
Query: 177 DKKWDEMIGEAVQHGYLKDTRECEEILEDMLSWDKLLPDDMKKKVEQKFNELGDMCESGE 236
D KWD MI E +QHG L DT++CEEILEDML WD+LLPDD+KKKVE KFNELGDMCE GE
Sbjct: 173 DNKWDHMIREGIQHGCLTDTKQCEEILEDMLKWDQLLPDDLKKKVEAKFNELGDMCERGE 232
Query: 237 LEPEQAYELFKKFEDEVVAEYMKQVETEEPPKYDFPAVPDTKKDIDDPPGEGPILRWVTR 296
+E E AYELFK+FEDE+V +Y Q+E E PP++ D D+DDP G+GPILRW +R
Sbjct: 233 IEAEAAYELFKEFEDEMVIQYGDQMEAEGPPQFGETDTSDRNTDLDDPSGKGPILRWQSR 292
Query: 297 AVFAPGGDAWHPKNRKVKMSVTVKELGLSKYQFRRLRELVGKRYHPGKDELTITSERFEH 356
VFAPGGDAWHPKNRKVKMSVTVKELGLS +Q +RLRELVGKRYH GKDELTIT ERFEH
Sbjct: 293 IVFAPGGDAWHPKNRKVKMSVTVKELGLSNHQAKRLRELVGKRYHSGKDELTITCERFEH 352
Query: 357 REENRKDCLRTLFSLIEEAGKANKMVDDARASYVKDRLRANPAFMERLRAKVLSSKGSNS 416
REENRKDCLRTL+ LIEEAGKANK+ +D R SYVK RLRA+PAFM++L+AK++ SK SN+
Sbjct: 353 REENRKDCLRTLYGLIEEAGKANKIAEDIRTSYVKQRLRASPAFMQKLQAKIIRSKESNA 412
Query: 417 IHA 419
I+A
Sbjct: 413 INA 415
>SGD|S000002582 [details] [associations]
symbol:RSM24 "Mitochondrial ribosomal protein of the small
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0005763 "mitochondrial small ribosomal subunit" evidence=IPI]
[GO:0032543 "mitochondrial translation" evidence=IC] [GO:0003735
"structural constituent of ribosome" evidence=IPI] SGD:S000002582
EMBL:BK006938 GO:GO:0003735 GO:GO:0032543 EMBL:Z46727 GO:GO:0005763
eggNOG:NOG276740 OrthoDB:EOG4DRDNH InterPro:IPR019349
InterPro:IPR017081 Pfam:PF10213 PIRSF:PIRSF036995 EMBL:AY557689
PIR:S49771 RefSeq:NP_010460.1 ProteinModelPortal:Q03976
DIP:DIP-5130N IntAct:Q03976 MINT:MINT-518689 STRING:Q03976
PaxDb:Q03976 PeptideAtlas:Q03976 EnsemblFungi:YDR175C GeneID:851755
KEGG:sce:YDR175C CYGD:YDR175c HOGENOM:HOG000248581 OMA:SAYEMPL
NextBio:969519 Genevestigator:Q03976 GermOnline:YDR175C
Uniprot:Q03976
Length = 319
Score = 135 (52.6 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 53/200 (26%), Positives = 91/200 (45%)
Query: 180 WDEMIGEAVQHGYLKDTRECEEILEDMLSWDKLLPDDMKK---KVEQKFNEL--GDMCES 234
W+ M ++ KD E +L + + +D+KK + EQ ++ G++
Sbjct: 70 WERMARLGSEYKPNKD--ELNALLTTS-EYSNVPVNDIKKLYHRGEQGAIDIKGGNVNRD 126
Query: 235 GELEPEQAYELFKKFEDEVVAEYMKQVETEEPPKYDFPAVPDTKKDIDDP-PGEGPILRW 293
L P EL + + E+VA++ +Q Y+ P + +++ P P P+
Sbjct: 127 NSLRPFMFDELPSQAQ-ELVAQHREQRFYNRLAAYELPLLAQYRQEYKRPSPESHPVTYR 185
Query: 294 VTRAVFAPGGDAWHPKNRKVKMSVTVKELGLSKYQFRRLRELVGKRYHPGKDELTITSER 353
T V G+ HP +RKV +SV KELGL + + R L RY D ++S++
Sbjct: 186 YTSYV----GEE-HPNSRKVVLSVKTKELGLEEKSLHKFRILARSRYDHTTDIFKMSSDK 240
Query: 354 FEHREENRK---DCLRTLFS 370
FEH +N + D L+ L +
Sbjct: 241 FEHASQNARYLHDILQRLLA 260
>TAIR|locus:2027824 [details] [associations]
symbol:AT1G73770 "AT1G73770" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC012679
EMBL:AY735562 EMBL:AY735563 EMBL:AY924728 IPI:IPI00519726
PIR:A96765 RefSeq:NP_001031277.1 RefSeq:NP_177518.1
UniGene:At.50965 PRIDE:Q9C9T5 ProMEX:Q9C9T5
EnsemblPlants:AT1G73770.1 EnsemblPlants:AT1G73770.2 GeneID:843712
KEGG:ath:AT1G73770 TAIR:At1g73770 eggNOG:NOG248855
HOGENOM:HOG000152230 InParanoid:Q9C9T5 OMA:SPANFRH PhylomeDB:Q9C9T5
ProtClustDB:CLSN2679892 Genevestigator:Q9C9T5 Uniprot:Q9C9T5
Length = 191
Score = 124 (48.7 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 54/169 (31%), Positives = 81/169 (47%)
Query: 1 MRRTLLRNASLISRNLLHNPNHNQPFIPPLAASTRTQLRLYSSDSKDSSNDQRAPDPAPE 60
MRR L R SL++RN+LH+P A+ R LR+ N+ R P E
Sbjct: 1 MRRFLQRVPSLLARNILHSP-----------ANFR-HLRI---------NNPRVVVPLFE 39
Query: 61 TALTAQ---TQKKDVS--IDVEDV-SNKELKMRIDKYFK-GDEEALPSILEAILQRRLVG 113
A++ + + D S E+V S +ELK RI + G+E+A+P + EA++ R+L G
Sbjct: 40 RAISRFVFFSSESDSSRGFRTEEVLSKEELKKRIQSFLDDGNEDAIPDLFEALMIRKLSG 99
Query: 114 KHXXXXXXXXXXXRLKPLDDV-KDQEFESDFE-----ELYATDEEIDDL 156
KH R P++D K + +SD E + +D E DDL
Sbjct: 100 KHDDSDDEVMDVVRKYPVNDAHKVDDIDSDIESDGHGDSSDSDIESDDL 148
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.133 0.380 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 419 408 0.00079 118 3 11 23 0.45 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 4
No. of states in DFA: 612 (65 KB)
Total size of DFA: 261 KB (2139 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 45.81u 0.24s 46.05t Elapsed: 00:00:02
Total cpu time: 45.81u 0.24s 46.05t Elapsed: 00:00:02
Start: Sat May 11 15:03:11 2013 End: Sat May 11 15:03:13 2013