Query 014730
Match_columns 419
No_of_seqs 160 out of 3017
Neff 9.9
Searched_HMMs 29240
Date Mon Mar 25 16:48:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014730.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014730hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n11_A Ankyrin; clathrin, BAND 100.0 1.9E-45 6.6E-50 359.5 26.6 347 1-401 21-391 (437)
2 1n11_A Ankyrin; clathrin, BAND 100.0 7.3E-43 2.5E-47 341.3 26.1 331 17-401 3-358 (437)
3 3utm_A Tankyrase-1; tankyrase, 100.0 3.5E-40 1.2E-44 312.1 26.7 270 1-396 31-322 (351)
4 1wdy_A 2-5A-dependent ribonucl 100.0 1.7E-39 5.8E-44 298.2 28.7 260 1-384 12-283 (285)
5 4g8k_A 2-5A-dependent ribonucl 100.0 1.3E-39 4.5E-44 307.2 27.6 271 1-401 32-315 (337)
6 2xai_A ASB-9, ankyrin repeat a 100.0 1.6E-39 5.6E-44 295.5 24.4 246 28-401 2-252 (261)
7 1wdy_A 2-5A-dependent ribonucl 100.0 3.9E-39 1.3E-43 295.8 24.4 246 28-401 4-267 (285)
8 3b7b_A Euchromatic histone-lys 100.0 4.4E-39 1.5E-43 288.0 23.6 231 20-415 3-234 (237)
9 3d9h_A CDNA FLJ77766, highly s 100.0 2.3E-38 7.9E-43 291.6 24.6 153 1-167 22-184 (285)
10 1oy3_D Transcription factor in 100.0 2.1E-38 7.1E-43 290.9 20.9 251 22-401 3-272 (282)
11 1k1a_A B-cell lymphoma 3-encod 100.0 1.2E-37 4.1E-42 279.2 23.4 219 22-401 3-230 (241)
12 3utm_A Tankyrase-1; tankyrase, 100.0 4.4E-38 1.5E-42 297.7 20.1 276 20-401 16-294 (351)
13 2fo1_E LIN-12 protein; beta-ba 100.0 8E-39 2.7E-43 306.1 14.2 248 26-401 91-360 (373)
14 1yyh_A HN1;, notch 1, ankyrin 100.0 1.2E-37 4.1E-42 281.8 20.4 228 20-374 2-246 (253)
15 3ljn_A Hypothetical protein; a 100.0 1.8E-37 6.2E-42 295.8 18.5 255 19-401 11-303 (364)
16 1s70_B 130 kDa myosin-binding 100.0 7.5E-37 2.6E-41 283.2 19.4 259 2-396 6-274 (299)
17 2dzn_A Probable 26S proteasome 100.0 6.2E-36 2.1E-40 265.8 24.2 210 29-398 2-219 (228)
18 4b93_B Ankyrin repeat domain-c 100.0 5.4E-37 1.8E-41 279.7 17.7 148 26-184 8-162 (269)
19 3aji_A 26S proteasome non-ATPa 100.0 3.6E-36 1.2E-40 268.0 22.6 221 28-373 5-227 (231)
20 4g8k_A 2-5A-dependent ribonucl 100.0 4E-36 1.4E-40 283.4 23.9 250 27-402 23-288 (337)
21 1yyh_A HN1;, notch 1, ankyrin 100.0 7.7E-37 2.6E-41 276.5 17.8 221 64-401 2-237 (253)
22 3aji_A 26S proteasome non-ATPa 100.0 8.2E-36 2.8E-40 265.7 22.7 215 69-400 3-218 (231)
23 2fo1_E LIN-12 protein; beta-ba 100.0 9.4E-37 3.2E-41 291.7 15.8 238 8-374 107-369 (373)
24 2xai_A ASB-9, ankyrin repeat a 100.0 1.9E-35 6.6E-40 268.5 23.3 209 71-399 2-211 (261)
25 3eu9_A Huntingtin-interacting 100.0 6.1E-35 2.1E-39 261.0 24.2 225 26-374 6-233 (240)
26 2f8y_A Notch homolog 1, transl 100.0 2.1E-35 7.1E-40 261.6 20.8 214 4-374 1-214 (223)
27 1k1a_A B-cell lymphoma 3-encod 100.0 1.8E-35 6E-40 265.1 20.2 215 1-373 16-238 (241)
28 3kea_A K1L; tropism, ANK repea 100.0 2.9E-35 9.9E-40 270.8 21.6 236 1-374 6-244 (285)
29 4b93_B Ankyrin repeat domain-c 100.0 7.7E-36 2.6E-40 272.0 16.1 213 1-373 18-238 (269)
30 3b7b_A Euchromatic histone-lys 100.0 1.6E-34 5.4E-39 258.3 23.4 215 1-373 18-232 (237)
31 2dzn_A Probable 26S proteasome 100.0 3.5E-34 1.2E-38 254.5 23.2 214 1-373 9-227 (228)
32 3ljn_A Hypothetical protein; a 100.0 6.9E-35 2.4E-39 277.9 18.6 244 1-373 27-311 (364)
33 3d9h_A CDNA FLJ77766, highly s 100.0 3E-34 1E-38 264.1 21.5 210 1-373 66-275 (285)
34 1oy3_D Transcription factor in 100.0 2.3E-33 7.8E-38 257.3 20.6 237 1-363 16-270 (282)
35 1ikn_D Protein (I-kappa-B-alph 100.0 1.3E-34 4.3E-39 259.0 11.9 218 26-399 5-231 (236)
36 2f8y_A Notch homolog 1, transl 100.0 1.5E-33 5E-38 249.7 16.9 202 48-401 2-205 (223)
37 2rfa_A Transient receptor pote 100.0 1.9E-32 6.5E-37 244.1 22.7 145 28-184 2-164 (232)
38 1sw6_A Regulatory protein SWI6 100.0 9E-34 3.1E-38 266.0 13.5 248 2-398 55-327 (327)
39 4gpm_A Engineered protein OR26 100.0 1.7E-32 5.9E-37 231.6 17.4 153 1-167 11-163 (169)
40 3hra_A Ankyrin repeat family p 100.0 1.1E-31 3.9E-36 233.5 23.2 198 26-374 2-201 (201)
41 3eu9_A Huntingtin-interacting 100.0 3.8E-32 1.3E-36 242.9 20.1 219 65-401 2-224 (240)
42 1s70_B 130 kDa myosin-binding 100.0 2.7E-32 9.4E-37 252.5 18.5 238 1-373 47-287 (299)
43 3kea_A K1L; tropism, ANK repea 100.0 3.1E-32 1.1E-36 250.6 14.4 166 1-184 38-205 (285)
44 2etb_A Transient receptor pote 100.0 8.1E-32 2.8E-36 243.8 15.7 142 29-183 2-181 (256)
45 2pnn_A Transient receptor pote 100.0 3.2E-31 1.1E-35 242.3 13.8 153 21-184 6-194 (273)
46 4gpm_A Engineered protein OR26 100.0 7.5E-30 2.6E-34 215.4 19.7 141 32-184 6-146 (169)
47 2rfa_A Transient receptor pote 100.0 9E-30 3.1E-34 226.7 19.4 173 1-186 10-209 (232)
48 3jxi_A Vanilloid receptor-rela 100.0 3.1E-30 1.1E-34 233.9 15.7 147 26-184 2-186 (260)
49 1ikn_D Protein (I-kappa-B-alph 100.0 1.1E-30 3.9E-35 233.2 11.8 170 1-183 15-193 (236)
50 3hra_A Ankyrin repeat family p 100.0 1.5E-29 5E-34 220.1 18.4 173 1-186 12-190 (201)
51 3v30_A DNA-binding protein rfx 100.0 2.7E-29 9.3E-34 213.0 15.7 163 1-177 9-171 (172)
52 1sw6_A Regulatory protein SWI6 100.0 4.9E-30 1.7E-34 240.6 11.0 210 7-362 110-327 (327)
53 2pnn_A Transient receptor pote 100.0 2.6E-29 9E-34 229.5 14.0 154 1-167 20-220 (273)
54 4hbd_A KN motif and ankyrin re 100.0 3.4E-29 1.1E-33 229.2 14.5 190 31-373 77-272 (276)
55 2vge_A RELA-associated inhibit 100.0 8.4E-30 2.9E-34 226.5 8.7 197 53-402 1-203 (229)
56 2etb_A Transient receptor pote 100.0 1E-28 3.5E-33 223.4 14.3 172 1-186 9-233 (256)
57 2y1l_E Darpin-8.4; hydrolase-i 100.0 3.9E-28 1.3E-32 205.3 17.0 143 31-185 15-157 (169)
58 3v30_A DNA-binding protein rfx 100.0 7.2E-28 2.5E-32 204.2 17.3 170 72-390 2-171 (172)
59 2rfm_A Putative ankyrin repeat 100.0 9.1E-28 3.1E-32 207.4 17.5 153 20-186 27-179 (192)
60 3f6q_A Integrin-linked protein 100.0 5E-28 1.7E-32 206.6 14.6 154 1-167 12-165 (179)
61 1ihb_A P18-INK4C(INK6), cyclin 100.0 7.8E-28 2.7E-32 201.8 14.7 149 1-164 12-161 (162)
62 3v31_A Ankyrin repeat family A 100.0 1.3E-27 4.4E-32 201.6 15.6 148 2-163 11-158 (167)
63 2vge_A RELA-associated inhibit 100.0 1.1E-30 3.9E-35 232.1 -3.8 156 10-179 1-161 (229)
64 3v31_A Ankyrin repeat family A 99.9 5.6E-27 1.9E-31 197.7 17.5 146 28-186 2-147 (167)
65 1awc_B Protein (GA binding pro 99.9 3.6E-27 1.2E-31 195.9 15.8 142 31-185 3-144 (153)
66 3twr_A Tankyrase-2; ankyrin re 99.9 1.1E-27 3.6E-32 201.7 12.7 146 26-183 5-150 (165)
67 2rfm_A Putative ankyrin repeat 99.9 3.2E-27 1.1E-31 204.0 15.2 149 1-163 42-190 (192)
68 3jxi_A Vanilloid receptor-rela 99.9 6.7E-28 2.3E-32 218.5 11.1 176 1-186 12-237 (260)
69 4hbd_A KN motif and ankyrin re 99.9 1.3E-27 4.5E-32 218.6 12.9 170 2-186 84-262 (276)
70 1bd8_A P19INK4D CDK4/6 inhibit 99.9 6E-27 2.1E-31 195.1 15.5 147 1-162 9-155 (156)
71 2y1l_E Darpin-8.4; hydrolase-i 99.9 1.9E-26 6.4E-31 194.9 17.4 125 27-163 45-169 (169)
72 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1.5E-28 5E-33 220.1 4.3 141 27-181 3-144 (239)
73 1awc_B Protein (GA binding pro 99.9 2.1E-26 7.2E-31 191.3 16.7 119 29-159 34-152 (153)
74 1ihb_A P18-INK4C(INK6), cyclin 99.9 1.6E-26 5.4E-31 193.8 15.0 147 27-186 3-149 (162)
75 1d9s_A Cyclin-dependent kinase 99.9 1.4E-26 4.8E-31 188.4 12.6 134 18-165 2-136 (136)
76 3twr_A Tankyrase-2; ankyrin re 99.9 2.4E-26 8.3E-31 193.3 13.3 124 28-164 41-164 (165)
77 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1.7E-26 5.9E-31 206.6 13.2 185 69-401 2-195 (239)
78 2aja_A Ankyrin repeat family p 99.9 1.7E-28 5.7E-33 233.0 -0.3 144 26-186 89-237 (376)
79 3f6q_A Integrin-linked protein 99.9 8.2E-26 2.8E-30 192.8 15.0 146 27-184 3-148 (179)
80 1bi7_B P16INK4A, MTS1, multipl 99.9 2E-26 6.9E-31 192.1 10.6 142 26-181 9-151 (156)
81 1bd8_A P19INK4D CDK4/6 inhibit 99.9 2.1E-25 7.2E-30 185.7 15.8 143 31-186 3-145 (156)
82 2aja_A Ankyrin repeat family p 99.9 2.5E-27 8.6E-32 224.9 1.0 137 31-185 66-210 (376)
83 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.9E-24 6.4E-29 172.8 15.6 126 28-165 1-126 (126)
84 2jab_A H10-2-G3; HER2, darpin, 99.9 9.4E-25 3.2E-29 177.5 13.3 126 26-163 11-136 (136)
85 3t8k_A Uncharacterized protein 99.9 2.7E-25 9.3E-30 190.5 7.3 147 1-163 13-177 (186)
86 3c5r_A BARD-1, BRCA1-associate 99.9 2.1E-24 7.2E-29 175.6 7.9 129 23-164 5-133 (137)
87 3t8k_A Uncharacterized protein 99.9 3.4E-24 1.2E-28 183.6 6.9 143 31-187 7-167 (186)
88 3aaa_C Myotrophin, protein V-1 99.9 3.7E-23 1.3E-27 164.9 10.8 118 26-155 4-121 (123)
89 1bi7_B P16INK4A, MTS1, multipl 99.9 9.5E-24 3.3E-28 175.8 7.1 132 1-147 19-151 (156)
90 3deo_A Signal recognition part 99.9 8.9E-24 3E-28 180.9 5.3 137 44-184 7-153 (183)
91 3ehr_A Osteoclast-stimulating 99.9 4E-23 1.4E-27 182.5 9.2 130 26-167 70-200 (222)
92 2jab_A H10-2-G3; HER2, darpin, 99.9 2E-22 6.8E-27 163.7 11.9 116 1-129 21-136 (136)
93 3deo_A Signal recognition part 99.9 1.9E-23 6.5E-28 178.8 5.9 113 26-151 41-154 (183)
94 1d9s_A Cyclin-dependent kinase 99.9 2E-22 6.9E-27 163.6 11.2 119 63-185 3-122 (136)
95 2b0o_E UPLC1; arfgap, structur 99.9 2.6E-22 9E-27 185.3 13.1 137 31-185 152-297 (301)
96 3c5r_A BARD-1, BRCA1-associate 99.9 4.2E-22 1.4E-26 161.9 11.7 118 63-184 2-119 (137)
97 1n0r_A 4ANK, 4 ankyrin repeats 99.9 8.9E-22 3E-26 157.1 12.5 118 1-131 9-126 (126)
98 3ui2_A Signal recognition part 99.9 7.5E-22 2.6E-26 176.9 12.8 137 31-183 16-153 (244)
99 3ui2_A Signal recognition part 99.9 9.5E-23 3.3E-27 182.8 6.9 111 26-149 42-153 (244)
100 3aaa_C Myotrophin, protein V-1 99.9 2.9E-21 1E-25 153.8 13.0 111 69-182 4-114 (123)
101 2b0o_E UPLC1; arfgap, structur 99.9 4.6E-22 1.6E-26 183.7 9.4 133 1-153 158-299 (301)
102 1n0q_A 3ANK, 3 ankyrin repeats 99.8 8E-21 2.7E-25 143.3 11.3 91 31-131 3-93 (93)
103 3jue_A Arfgap with coiled-coil 99.8 1.1E-20 3.8E-25 178.5 13.5 145 28-184 198-347 (368)
104 1n0q_A 3ANK, 3 ankyrin repeats 99.8 1.9E-20 6.5E-25 141.3 12.0 93 71-165 1-93 (93)
105 1dcq_A PYK2-associated protein 99.8 1.6E-20 5.3E-25 171.5 13.1 125 31-166 131-264 (278)
106 3lvq_E ARF-GAP with SH3 domain 99.8 1.9E-20 6.6E-25 185.2 14.3 126 31-167 133-267 (497)
107 2l6b_A NR1C; ankyrin, consensu 99.8 1.4E-20 4.8E-25 147.9 7.8 107 26-144 6-112 (115)
108 1dcq_A PYK2-associated protein 99.8 6.5E-20 2.2E-24 167.4 12.6 119 1-132 137-264 (278)
109 3ehr_A Osteoclast-stimulating 99.8 2.1E-20 7.3E-25 164.9 6.5 121 1-134 80-201 (222)
110 2l6b_A NR1C; ankyrin, consensu 99.8 5.2E-20 1.8E-24 144.7 7.4 109 67-178 4-112 (115)
111 3lvq_E ARF-GAP with SH3 domain 99.8 1.3E-19 4.3E-24 179.3 11.6 125 1-134 139-268 (497)
112 3jue_A Arfgap with coiled-coil 99.8 4.7E-19 1.6E-23 167.4 13.2 136 1-149 206-346 (368)
113 2zgd_A 3 repeat synthetic anky 99.7 1.5E-17 5.1E-22 129.5 10.4 95 63-159 15-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.7 1.6E-17 5.4E-22 129.3 9.5 89 26-125 21-109 (110)
115 3zrh_A Ubiquitin thioesterase 42.1 40 0.0014 31.2 5.6 49 324-373 29-91 (454)
116 1gp8_A Protein (scaffolding pr 31.7 31 0.001 19.9 2.0 22 318-339 14-35 (40)
117 3mkq_B Coatomer subunit alpha; 30.1 2E+02 0.0068 23.1 7.5 125 1-162 15-140 (177)
No 1
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.9e-45 Score=359.52 Aligned_cols=347 Identities=16% Similarity=0.071 Sum_probs=277.1
Q ss_pred CccCCChHHHHHHHHhCCcccccccCCCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHH
Q 014730 1 MIEKNDWPGVEDFVTNHPDALTAKIVEPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCA 80 (419)
Q Consensus 1 A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~ 80 (419)
|+..|+.++|++|+++ +.+++.+ +..| .||||+|+ . .|+.+++++|++.| ++++.++..|.||||+|+
T Consensus 21 Aa~~g~~~~v~~Ll~~-g~~~~~~-~~~~-~t~L~~A~-~------~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~ 88 (437)
T 1n11_A 21 ASFMGHLPIVKNLLQR-GASPNVS-NVKV-ETPLHMAA-R------AGHTEVAKYLLQNK--AKVNAKAKDDQTPLHCAA 88 (437)
T ss_dssp HHHHTCHHHHHHHHHT-TCCSCCS-SSCC-CCHHHHHH-H------HTCHHHHHHHHHHT--CCSSCCCTTSCCHHHHHH
T ss_pred HHHCCCHHHHHHHHHc-CCCCCCC-CCCC-CCHHHHHH-H------cCCHHHHHHHHhCC--CCCCCCCCCCCCHHHHHH
Confidence 6788999999999988 8888888 9999 99999999 9 99999999999999 899999999999999999
Q ss_pred HcCCHHHHHHHHhcCCCCCccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHHHcCcHHHHHHHH
Q 014730 81 AKGNLKALKVLLKYNPDLTNIRDSDGYLPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLIAANLYDVALDLL 160 (419)
Q Consensus 81 ~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll 160 (419)
..|+.+++++|+++|++ ++..+..|.||||+|+..|+.+++++|++.|++.+. .+..|.||||.|+..|+.+++++|+
T Consensus 89 ~~g~~~~v~~Ll~~ga~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll 166 (437)
T 1n11_A 89 RIGHTNMVKLLLENNAN-PNLATTAGHTPLHIAAREGHVETVLALLEKEASQAC-MTKKGFTPLHVAAKYGKVRVAELLL 166 (437)
T ss_dssp HHTCHHHHHHHHHHTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCC-CCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HCCCHHHHHHHHhCCCC-CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcC-CCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 99999999999999999 799999999999999999999999999999999888 8899999999999999999999999
Q ss_pred hhCCCCCcCCCCCCCcHHHHHHhCCCCCCCCCchhHHHHHHHhh------------------hc-ccCCCCccccccccc
Q 014730 161 KLHPTIGRDNIDSRRIVLNTLSQKPYAFASGSRLGRLRRLIYNC------------------WC-QQSCIPLEKERVPSI 221 (419)
Q Consensus 161 ~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~------------------~~-~~~~~~~~~~~~~~~ 221 (419)
++|+++. ..+..|.||||+|+..+.. ...+.++... .. +..+...+.+...+
T Consensus 167 ~~g~~~~-~~~~~g~t~L~~A~~~~~~-------~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~- 237 (437)
T 1n11_A 167 ERDAHPN-AAGKNGLTPLHVAVHHNNL-------DIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGS- 237 (437)
T ss_dssp HTTCCTT-CCCSSCCCHHHHHHHTTCH-------HHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-
T ss_pred hCCCCCC-CCCCCCCCHHHHHHHcCCH-------HHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-
Confidence 9999887 7889999999999987532 2222222211 00 00011111111000
Q ss_pred ccCCCCCCCCCCCccccccccCCCCC-CCCCChhhHHHHHhhHHHHHHHHHHHHhhh--cCchhHHH-HHHhhhhHhHHH
Q 014730 222 QSNDDQNVDGDTENFTVTSKMHPKES-TPFGSTQQITAIFGLMFHKLNRMLWNALMR--LAPSIKVI-HDQKLTHMRTVE 297 (419)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~ 297 (419)
.... .....+.+.++..++...+..++....... ...+.+++ +++..++..+++
T Consensus 238 ----------------------~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~ 295 (437)
T 1n11_A 238 ----------------------ANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVAD 295 (437)
T ss_dssp ----------------------TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHH
T ss_pred ----------------------CCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHH
Confidence 0001 122236777777777777766665544432 33455666 777777765544
Q ss_pred HHHHHHhhhhhccccchhhh-hHHHHHHHHhChHHHHHHHHHhcCCccccccCCCCchHHHHHhhchHHHHHHHhhcccc
Q 014730 298 IVRIICEGVVWTNFQKSAQL-SGAMLSAAILGIPEVVNEFIMAYDSCSNWSNQDGHTIFDHAVLHRREKVFNLIQGVNFT 376 (419)
Q Consensus 298 ~l~~l~~~~~~~~~~~~~~~-~t~L~~A~~~g~~e~v~~Ll~~~~~d~~~~~~~g~t~Lh~Av~~~~~~iv~~L~~~~~~ 376 (419)
.+.+.+. +++..+.. .||||+|+..|+.++|++|++. |++++.++..|+||||+|+.+++.+++++|+++
T Consensus 296 ---~Ll~~g~--~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~--- 366 (437)
T 1n11_A 296 ---VLIKHGV--MVDATTRMGYTPLHVASHYGNIKLVKFLLQH-QADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKN--- 366 (437)
T ss_dssp ---HHHHHTC--CTTCCCSSCCCHHHHHHHSSCSHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT---
T ss_pred ---HHHhCCc--cCCCCCCCCCCHHHHHHHcCcHHHHHHHHhc-CCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHC---
Confidence 4456554 44433222 8999999999999999999999 999999999999999999999999999999999
Q ss_pred cceeeeccCCCCccchhcccccCCC
Q 014730 377 TFLFSSRDKSGNNILHLAGRLVPSS 401 (419)
Q Consensus 377 ~~~~~~~D~~G~t~Lh~A~~~~~~~ 401 (419)
+.+++.+|.+|+||||+|++.|..+
T Consensus 367 ga~~~~~~~~g~t~l~~A~~~g~~~ 391 (437)
T 1n11_A 367 GASPNEVSSDGTTPLAIAKRLGYIS 391 (437)
T ss_dssp TCCSCCCCSSSCCHHHHHHHTTCHH
T ss_pred cCCCCCCCCCCCCHHHHHHHcCcHH
Confidence 6778899999999999999998754
No 2
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=7.3e-43 Score=341.27 Aligned_cols=331 Identities=15% Similarity=0.094 Sum_probs=257.0
Q ss_pred CCcccccccCCCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCC
Q 014730 17 HPDALTAKIVEPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCAAKGNLKALKVLLKYNP 96 (419)
Q Consensus 17 ~~~~~~~~~~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~ 96 (419)
.|.+++.. +..| .||||+|| . .|+.++|++|++.| .+++..+..|.||||+|+..|+.+++++|+++|+
T Consensus 3 ~g~~~~~~-~~~g-~t~L~~Aa-~------~g~~~~v~~Ll~~g--~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~ 71 (437)
T 1n11_A 3 PGISGGGG-GESG-LTPLHVAS-F------MGHLPIVKNLLQRG--ASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKA 71 (437)
T ss_dssp --------------CCHHHHHH-H------HTCHHHHHHHHHTT--CCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTC
T ss_pred CCCCcccc-CCCC-CCHHHHHH-H------CCCHHHHHHHHHcC--CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCC
Confidence 36677888 9999 99999999 9 99999999999999 8999999999999999999999999999999999
Q ss_pred CCCccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhhCCCCCcCCCCCCCc
Q 014730 97 DLTNIRDSDGYLPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLIAANLYDVALDLLKLHPTIGRDNIDSRRI 176 (419)
Q Consensus 97 ~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~ 176 (419)
+ ++.++..|.||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|++.+++.. ..+..|.|
T Consensus 72 ~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~-~~~~~g~t 148 (437)
T 1n11_A 72 K-VNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNL-ATTAGHTPLHIAAREGHVETVLALLEKEASQA-CMTKKGFT 148 (437)
T ss_dssp C-SSCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTC-CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSC-CCCTTSCC
T ss_pred C-CCCCCCCCCCHHHHHHHCCCHHHHHHHHhCCCCCCC-CCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCc-CCCCCCCC
Confidence 9 799999999999999999999999999999999999 99999999999999999999999999998876 78899999
Q ss_pred HHHHHHhCCCCCCCCCchhHHHHHHHh------------------hhc-ccCCCCcccccccccccCCCCCCCCCCCccc
Q 014730 177 VLNTLSQKPYAFASGSRLGRLRRLIYN------------------CWC-QQSCIPLEKERVPSIQSNDDQNVDGDTENFT 237 (419)
Q Consensus 177 ~l~~a~~~~~~~~~~~~~~~~~~~~~~------------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (419)
|||+|+..+.. ...+.++.. +.. +..+...+.+...+
T Consensus 149 ~L~~A~~~g~~-------~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~----------------- 204 (437)
T 1n11_A 149 PLHVAAKYGKV-------RVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGS----------------- 204 (437)
T ss_dssp HHHHHHHTTCH-------HHHHHHHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCC-----------------
T ss_pred HHHHHHHcCCH-------HHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCC-----------------
Confidence 99999987642 222333222 111 11111111111110
Q ss_pred cccccCCCCC-CCCCChhhHHHHHhhHHHHHHHHHHHHhhh--cCchhHHH-HHHhhhhHhHHHHHHHHHhhhhhccccc
Q 014730 238 VTSKMHPKES-TPFGSTQQITAIFGLMFHKLNRMLWNALMR--LAPSIKVI-HDQKLTHMRTVEIVRIICEGVVWTNFQK 313 (419)
Q Consensus 238 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~l~~l~~~~~~~~~~~ 313 (419)
+... .....+.+.++..+....+..++....... ...+.+++ +++..++..++ +.+++... +.+.
T Consensus 205 ------~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v---~~Ll~~~~--~~~~ 273 (437)
T 1n11_A 205 ------PHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMV---ALLLSKQA--NGNL 273 (437)
T ss_dssp ------SCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHH---HHHHTTTC--CTTC
T ss_pred ------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHH---HHHHhcCC--CCCC
Confidence 0001 112236777777777777666666554442 33456666 77777776444 44566654 3332
Q ss_pred --hhhhhHHHHHHHHhChHHHHHHHHHhcCCccccccCCCCchHHHHHhhchHHHHHHHhhcccccceeeeccCCCCccc
Q 014730 314 --SAQLSGAMLSAAILGIPEVVNEFIMAYDSCSNWSNQDGHTIFDHAVLHRREKVFNLIQGVNFTTFLFSSRDKSGNNIL 391 (419)
Q Consensus 314 --~~~~~t~L~~A~~~g~~e~v~~Ll~~~~~d~~~~~~~g~t~Lh~Av~~~~~~iv~~L~~~~~~~~~~~~~D~~G~t~L 391 (419)
..+ .||||.|+..|+.+++++|++. |++++.++..|+||||+|+.+++.+++++|+++ +.+++.+|..|+|||
T Consensus 274 ~~~~g-~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~---gad~n~~~~~g~t~L 348 (437)
T 1n11_A 274 GNKSG-LTPLHLVAQEGHVPVADVLIKH-GVMVDATTRMGYTPLHVASHYGNIKLVKFLLQH---QADVNAKTKLGYSPL 348 (437)
T ss_dssp CCTTC-CCHHHHHHHHTCHHHHHHHHHH-TCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHT---TCCTTCCCTTSCCHH
T ss_pred CCCCC-CCHHHHHHHcCCHHHHHHHHhC-CccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhc---CCCCCCCCCCCCCHH
Confidence 233 8999999999999999999999 999999999999999999999999999999999 677899999999999
Q ss_pred hhcccccCCC
Q 014730 392 HLAGRLVPSS 401 (419)
Q Consensus 392 h~A~~~~~~~ 401 (419)
|+|++.|+.+
T Consensus 349 ~~A~~~g~~~ 358 (437)
T 1n11_A 349 HQAAQQGHTD 358 (437)
T ss_dssp HHHHHTTCHH
T ss_pred HHHHHCChHH
Confidence 9999998765
No 3
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=3.5e-40 Score=312.14 Aligned_cols=270 Identities=14% Similarity=0.066 Sum_probs=175.8
Q ss_pred CccCCChHHHHHHHHhCCcccccccCCCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHH
Q 014730 1 MIEKNDWPGVEDFVTNHPDALTAKIVEPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCA 80 (419)
Q Consensus 1 A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~ 80 (419)
|++.|+.+.|+.++...+.+++.+ |..| .||||+|+ . .|+.+++++|++.| .+++..|..|.||||+|+
T Consensus 31 A~~~g~~~~v~~ll~~~~~~~~~~-d~~g-~t~L~~A~-~------~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~ 99 (351)
T 3utm_A 31 AARSGNEEKLMALLTPLNVNCHAS-DGRK-STPLHLAA-G------YNRVRIVQLLLQHG--ADVHAKDKGGLVPLHNAC 99 (351)
T ss_dssp HHHHTCHHHHHHHCCTTTTTCCCS-STTC-CCHHHHHH-H------TTCHHHHHHHHHTT--CCTTCCCTTCCCHHHHHH
T ss_pred HHHcCCHHHHHHHHHhcCCCcccC-CCCC-CCHHHHHH-H------cCCHHHHHHHHHcC--CCCCccCCCCCcHHHHHH
Confidence 345556666666665555555555 5555 66666666 5 56666666666665 555555556666666666
Q ss_pred HcCCHHHHHHHHhcCCCCCccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHH-------------
Q 014730 81 AKGNLKALKVLLKYNPDLTNIRDSDGYLPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFL------------- 147 (419)
Q Consensus 81 ~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a------------- 147 (419)
..|+.+++++|+++|++ ++.++..|.||||+|+..|+.+++++|+++|++++. .+..|.+|++.|
T Consensus 100 ~~g~~~iv~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~~~l~~a~~~~~~~~~~~~~ 177 (351)
T 3utm_A 100 SYGHYEVTELLLKHGAC-VNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTL-VNCHGKSAVDMAPTPELRERLTYEF 177 (351)
T ss_dssp HTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHCSSHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcc-ccCCCCcchHHHhhhhhHHHHHhhh
Confidence 66666666666666555 455555566666666666666666666666665555 555555554443
Q ss_pred --------HHcCcHHHHHHHHhhCCCCCcCCCCCCCcHHHHHHhCCCCCCCCCchhHHHHHHHhhhcccCCCCccccccc
Q 014730 148 --------IAANLYDVALDLLKLHPTIGRDNIDSRRIVLNTLSQKPYAFASGSRLGRLRRLIYNCWCQQSCIPLEKERVP 219 (419)
Q Consensus 148 --------~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (419)
+..++.+.++.++..+.... ..+..|.||||+|+...
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~t~L~~A~~~~---------------------------------- 222 (351)
T 3utm_A 178 KGHSLLQAAREADLAKVKKTLALEIINF-KQPQSHETALHCAVASL---------------------------------- 222 (351)
T ss_dssp HHHHHHHHHHTTCHHHHHHHTTTCCTTC-CCTTTCCCHHHHHHHCC----------------------------------
T ss_pred cccHHHHHHHhccHHHHHHHHHhhcccc-cCCCCCCCHHHHHHHHh----------------------------------
Confidence 22333344444443332222 34444555555555432
Q ss_pred ccccCCCCCCCCCCCccccccccCCCCCCCCCChhhHHHHHhhHHHHHHHHHHHHhhhcCchhHHHHHHhhhhHhHHHHH
Q 014730 220 SIQSNDDQNVDGDTENFTVTSKMHPKESTPFGSTQQITAIFGLMFHKLNRMLWNALMRLAPSIKVIHDQKLTHMRTVEIV 299 (419)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 299 (419)
+....+++
T Consensus 223 ------------------------------------------------------------------------~~~~~~~~ 230 (351)
T 3utm_A 223 ------------------------------------------------------------------------HPKRKQVA 230 (351)
T ss_dssp ------------------------------------------------------------------------STTHHHHH
T ss_pred ------------------------------------------------------------------------CccHHHHH
Confidence 11123455
Q ss_pred HHHHhhhhhccccchhhh-hHHHHHHHHhChHHHHHHHHHhcCCccccccCCCCchHHHHHhhchHHHHHHHhhcccccc
Q 014730 300 RIICEGVVWTNFQKSAQL-SGAMLSAAILGIPEVVNEFIMAYDSCSNWSNQDGHTIFDHAVLHRREKVFNLIQGVNFTTF 378 (419)
Q Consensus 300 ~~l~~~~~~~~~~~~~~~-~t~L~~A~~~g~~e~v~~Ll~~~~~d~~~~~~~g~t~Lh~Av~~~~~~iv~~L~~~~~~~~ 378 (419)
+.+.+.+. +++..+.. .||||+|+..|+.++|++|++. |++++.++..|+||||+|+.+++.+++++|+++ +.
T Consensus 231 ~~Ll~~g~--~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~---ga 304 (351)
T 3utm_A 231 ELLLRKGA--NVNEKNKDFMTPLHVAAERAHNDVMEVLHKH-GAKMNALDSLGQTALHRAALAGHLQTCRLLLSY---GS 304 (351)
T ss_dssp HHHHHTTC--CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT---TC
T ss_pred HHHHHcCC--CcCCcCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHc---CC
Confidence 55566654 44333222 8999999999999999999999 999999999999999999999999999999999 66
Q ss_pred eeeeccCCCCccchhccc
Q 014730 379 LFSSRDKSGNNILHLAGR 396 (419)
Q Consensus 379 ~~~~~D~~G~t~Lh~A~~ 396 (419)
+++..|..|.||||+|..
T Consensus 305 d~~~~~~~g~tal~~a~~ 322 (351)
T 3utm_A 305 DPSIISLQGFTAAQMGNE 322 (351)
T ss_dssp CTTCCCTTSCCHHHHSCH
T ss_pred CCCCcCCCCCChhhhhhH
Confidence 789999999999999954
No 4
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.7e-39 Score=298.23 Aligned_cols=260 Identities=18% Similarity=0.169 Sum_probs=223.0
Q ss_pred CccCCChHHHHHHHHhCCcccccccCCCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHH
Q 014730 1 MIEKNDWPGVEDFVTNHPDALTAKIVEPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCA 80 (419)
Q Consensus 1 A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~ 80 (419)
|++.|+.++|+.|+++ +.+++.+.+..| .||||+|+ . .|+.+++++|++.| .+++..|..|.||||+|+
T Consensus 12 A~~~g~~~~v~~Ll~~-g~~~~~~~~~~g-~t~L~~A~-~------~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~ 80 (285)
T 1wdy_A 12 AVQNEDVDLVQQLLEG-GANVNFQEEEGG-WTPLHNAV-Q------MSREDIVELLLRHG--ADPVLRKKNGATPFLLAA 80 (285)
T ss_dssp HHHTTCHHHHHHHHHT-TCCTTCCCTTTC-CCHHHHHH-H------TTCHHHHHHHHHTT--CCTTCCCTTCCCHHHHHH
T ss_pred HHHcCCHHHHHHHHHc-CCCcccccCCCC-CcHHHHHH-H------cCCHHHHHHHHHcC--CCCcccCCCCCCHHHHHH
Confidence 6789999999999988 677777646677 99999999 9 99999999999999 889999999999999999
Q ss_pred HcCCHHHHHHHHhcCCCCCccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCcccc----------CCCCCcHHHHHHHc
Q 014730 81 AKGNLKALKVLLKYNPDLTNIRDSDGYLPVHNAAYYGHKDTFQYLLEATNGVDIYR----------GNDGAMVLLFLIAA 150 (419)
Q Consensus 81 ~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~----------~~~g~t~l~~a~~~ 150 (419)
..|+.+++++|+++|++ ++.++..|.||||+|+..|+.+++++|+++|++++. . +..|.||||.|+..
T Consensus 81 ~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~~~~~~~~~~~g~t~L~~A~~~ 158 (285)
T 1wdy_A 81 IAGSVKLLKLFLSKGAD-VNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNL-RRKTKEDQERLRKGGATALMDAAEK 158 (285)
T ss_dssp HHTCHHHHHHHHHTTCC-TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTC-CCCCCHHHHHTTCCCCCHHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCC-CCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCccc-ccccHHHHHhhccCCCcHHHHHHHc
Confidence 99999999999999999 788999999999999999999999999999999887 5 77899999999999
Q ss_pred CcHHHHHHHHhh-CCCCCcCCCCCCCcHHHHHHhCCCCCCCCCchhHHHHHHHhhhcccCCCCcccccccccccCCCCCC
Q 014730 151 NLYDVALDLLKL-HPTIGRDNIDSRRIVLNTLSQKPYAFASGSRLGRLRRLIYNCWCQQSCIPLEKERVPSIQSNDDQNV 229 (419)
Q Consensus 151 ~~~~~~~~Ll~~-~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (419)
|+.+++++|++. |.++. ..+..|.||||+|+..+....
T Consensus 159 ~~~~~v~~Ll~~~~~~~~-~~~~~g~t~l~~a~~~~~~~~---------------------------------------- 197 (285)
T 1wdy_A 159 GHVEVLKILLDEMGADVN-ACDNMGRNALIHALLSSDDSD---------------------------------------- 197 (285)
T ss_dssp TCHHHHHHHHHTSCCCTT-CCCTTSCCHHHHHHHCSCTTT----------------------------------------
T ss_pred CCHHHHHHHHHhcCCCCC-ccCCCCCCHHHHHHHccccch----------------------------------------
Confidence 999999999998 88876 789999999999988643110
Q ss_pred CCCCCccccccccCCCCCCCCCChhhHHHHHhhHHHHHHHHHHHHhhhcCchhHHHHHHhhhhHhHHHHHHHHHhhhhhc
Q 014730 230 DGDTENFTVTSKMHPKESTPFGSTQQITAIFGLMFHKLNRMLWNALMRLAPSIKVIHDQKLTHMRTVEIVRIICEGVVWT 309 (419)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~ 309 (419)
..++++.+.+.+.
T Consensus 198 -----------------------------------------------------------------~~~i~~~Ll~~g~-- 210 (285)
T 1wdy_A 198 -----------------------------------------------------------------VEAITHLLLDHGA-- 210 (285)
T ss_dssp -----------------------------------------------------------------HHHHHHHHHHTTC--
T ss_pred -----------------------------------------------------------------HHHHHHHHHHcCC--
Confidence 1234444455544
Q ss_pred cccchhhh-hHHHHHHHHhChHHHHHHHHHhcCCccccccCCCCchHHHHHhhchHHHHHHHhhcccccceeeecc
Q 014730 310 NFQKSAQL-SGAMLSAAILGIPEVVNEFIMAYDSCSNWSNQDGHTIFDHAVLHRREKVFNLIQGVNFTTFLFSSRD 384 (419)
Q Consensus 310 ~~~~~~~~-~t~L~~A~~~g~~e~v~~Ll~~~~~d~~~~~~~g~t~Lh~Av~~~~~~iv~~L~~~~~~~~~~~~~D 384 (419)
+++..+.. .||||+|+..|+.++|++|++.++++++.++..|+||||+|+++++.+++++|+++ +.+++.+|
T Consensus 211 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~---Ga~~~~~d 283 (285)
T 1wdy_A 211 DVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKR---GASTDCGD 283 (285)
T ss_dssp CSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH---SSCSCCSS
T ss_pred CCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHc---CCCCCccc
Confidence 43332211 89999999999999999999933999999999999999999999999999999999 45555555
No 5
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=1.3e-39 Score=307.25 Aligned_cols=271 Identities=18% Similarity=0.159 Sum_probs=230.2
Q ss_pred CccCCChHHHHHHHHhCCcccccccCC-CCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHH
Q 014730 1 MIEKNDWPGVEDFVTNHPDALTAKIVE-PGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFC 79 (419)
Q Consensus 1 A~~~g~~~~v~~ll~~~~~~~~~~~~~-~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A 79 (419)
||++|+.++|+.||++ |.++|.+ +. .| .||||+|| . .|+.++|++|+++| ++++.++..+.+|++.+
T Consensus 32 Av~~g~~~~V~~LL~~-Gadvn~~-~~~~g-~TpLh~A~-~------~g~~~iv~~Ll~~g--a~~~~~~~~~~~~~~~~ 99 (337)
T 4g8k_A 32 AVQNEDVDLVQQLLEG-GANVNFQ-EEEGG-WTPLHNAV-Q------MSREDIVELLLRHG--ADPVLRKKNGATPFILA 99 (337)
T ss_dssp HHHTTCHHHHHHHHHH-TCCTTCC-CTTTC-CCHHHHHH-H------TTCHHHHHHHHHTT--CCTTCCCTTCCCHHHHH
T ss_pred HHHcCCHHHHHHHHHC-CCCCCcc-CCCCC-cCHHHHHH-H------cCCHHHHHHHHHcC--CchhhhccCCCchhHHH
Confidence 6889999999999988 8899988 65 47 99999999 9 99999999999999 99999999999999999
Q ss_pred HHcCCHHHHHHHHhcCCCCCccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccc---------cCCCCCcHHHHHHHc
Q 014730 80 AAKGNLKALKVLLKYNPDLTNIRDSDGYLPVHNAAYYGHKDTFQYLLEATNGVDIY---------RGNDGAMVLLFLIAA 150 (419)
Q Consensus 80 ~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~---------~~~~g~t~l~~a~~~ 150 (419)
+..+...++..+++.+++ ++.++..|.||||+|+..|+.+++++|+++|++++.. .+..|.||||+|+..
T Consensus 100 ~~~~~~~~~~~~~~~~~~-~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~ 178 (337)
T 4g8k_A 100 AIAGSVKLLKLFLSKGAD-VNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEK 178 (337)
T ss_dssp HHHTCHHHHHHHHTTTCC-TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHH
T ss_pred HhcccchhhHHhhhccch-hhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHC
Confidence 999999999999999998 7999999999999999999999999999999988763 244689999999999
Q ss_pred CcHHHHHHHHhh-CCCCCcCCCCCCCcHHHHHHhCCCCCCCCCchhHHHHHHHhhhcccCCCCcccccccccccCCCCCC
Q 014730 151 NLYDVALDLLKL-HPTIGRDNIDSRRIVLNTLSQKPYAFASGSRLGRLRRLIYNCWCQQSCIPLEKERVPSIQSNDDQNV 229 (419)
Q Consensus 151 ~~~~~~~~Ll~~-~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (419)
|+.+++++|+++ |+++. .+|..|.++++.++......
T Consensus 179 g~~~~v~~LL~~~gad~n-~~d~~g~t~l~~~~~~~~~~----------------------------------------- 216 (337)
T 4g8k_A 179 GHVEVLKILLDEMGADVN-ACDNMGRNALIHALLSSDDS----------------------------------------- 216 (337)
T ss_dssp TCHHHHHHHHHHSCCCTT-CCCTTSCCHHHHHHHHSCTT-----------------------------------------
T ss_pred CCHHHHHHHHhccCCCcC-ccCCCCCcHHHHHHHHcCcc-----------------------------------------
Confidence 999999999975 78877 88999999998876532110
Q ss_pred CCCCCccccccccCCCCCCCCCChhhHHHHHhhHHHHHHHHHHHHhhhcCchhHHHHHHhhhhHhHHHHHHHHHhhhhhc
Q 014730 230 DGDTENFTVTSKMHPKESTPFGSTQQITAIFGLMFHKLNRMLWNALMRLAPSIKVIHDQKLTHMRTVEIVRIICEGVVWT 309 (419)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~ 309 (419)
....+++.|++.+.
T Consensus 217 ----------------------------------------------------------------~~~~i~~lLl~~ga-- 230 (337)
T 4g8k_A 217 ----------------------------------------------------------------DVEAITHLLLDHGA-- 230 (337)
T ss_dssp ----------------------------------------------------------------THHHHHHHHHHTTC--
T ss_pred ----------------------------------------------------------------cHHHHHHHHHHCCC--
Confidence 00123344455544
Q ss_pred cccch--hhhhHHHHHHHHhChHHHHHHHHHhcCCccccccCCCCchHHHHHhhchHHHHHHHhhcccccceeeeccCCC
Q 014730 310 NFQKS--AQLSGAMLSAAILGIPEVVNEFIMAYDSCSNWSNQDGHTIFDHAVLHRREKVFNLIQGVNFTTFLFSSRDKSG 387 (419)
Q Consensus 310 ~~~~~--~~~~t~L~~A~~~g~~e~v~~Ll~~~~~d~~~~~~~g~t~Lh~Av~~~~~~iv~~L~~~~~~~~~~~~~D~~G 387 (419)
+++.. .+ .||||+|+..|+.++|+.|+...+++++.+|..|+||||+|+++++.++|++|+++| .++ ++
T Consensus 231 d~n~~d~~g-~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~G---Ad~-----n~ 301 (337)
T 4g8k_A 231 DVNVRGERG-KTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRG---AST-----DC 301 (337)
T ss_dssp CTTCCCGGG-CCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTS---CSS-----TT
T ss_pred CCCCcCCCC-CCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCC---CCC-----CC
Confidence 44332 33 899999999999999999998658999999999999999999999999999999994 333 45
Q ss_pred CccchhcccccCCC
Q 014730 388 NNILHLAGRLVPSS 401 (419)
Q Consensus 388 ~t~Lh~A~~~~~~~ 401 (419)
.||||+|++.|+.+
T Consensus 302 ~~~L~~A~~~~~~~ 315 (337)
T 4g8k_A 302 GDLVMTARRNYDHS 315 (337)
T ss_dssp CCHHHHHHHTTCHH
T ss_pred CCHHHHHHHcCCHH
Confidence 67999999998866
No 6
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=1.6e-39 Score=295.46 Aligned_cols=246 Identities=15% Similarity=0.094 Sum_probs=214.9
Q ss_pred CCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCc
Q 014730 28 PGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCAAKGNLKALKVLLKYNPDLTNIRDSDGY 107 (419)
Q Consensus 28 ~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~ 107 (419)
+| .||||+|+ . .|+.+++++|++.| .+++..|..|.||||+|+..|+.+++++|+++|++ ++.++..|.
T Consensus 2 ~g-~t~L~~A~-~------~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~ 70 (261)
T 2xai_A 2 SD-WSPMHEAA-I------HGHQLSLRNLISQG--WAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQ-VNGVTADWH 70 (261)
T ss_dssp ---CCHHHHHH-H------HTCHHHHHHHHHTT--CCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSC
T ss_pred CC-CCHHHHHH-H------cCCHHHHHHHHHCC--CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCC
Confidence 46 99999999 9 99999999999999 89999999999999999999999999999999999 799999999
Q ss_pred hHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhhCCCCCcCCCCCCCcHHHHHHhCCCC
Q 014730 108 LPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLIAANLYDVALDLLKLHPTIGRDNIDSRRIVLNTLSQKPYA 187 (419)
Q Consensus 108 t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~~~ 187 (419)
||||+|+..|+.+++++|+++|++++. +..|.||||.|+..|+.+++++|++.|+++. ..|..|.||||+|+..+.
T Consensus 71 t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~- 146 (261)
T 2xai_A 71 TPLFNACVSGSWDCVNLLLQHGASVQP--ESDLASPIHEAARRGHVECVNSLIAYGGNID-HKISHLGTPLYLACENQQ- 146 (261)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCSSC--SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCBTTTBCHHHHHHHTTC-
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCCCCC--CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCC-cCCCCCCCHHHHHHHhCC-
Confidence 999999999999999999999998876 4569999999999999999999999999987 899999999999998632
Q ss_pred CCCCCchhHHHHHHHhhhcccCCCCcccccccccccCCCCCCCCCCCccccccccCCCCCCCCCChhhHHHHHhhHHHHH
Q 014730 188 FASGSRLGRLRRLIYNCWCQQSCIPLEKERVPSIQSNDDQNVDGDTENFTVTSKMHPKESTPFGSTQQITAIFGLMFHKL 267 (419)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (419)
T Consensus 147 -------------------------------------------------------------------------------- 146 (261)
T 2xai_A 147 -------------------------------------------------------------------------------- 146 (261)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhhhcCchhHHHHHHhhhhHhHHHHHHHHHhhhhhccccchhhhhHHHHHHHHhChHHHHHHHHHhcCCccccc
Q 014730 268 NRMLWNALMRLAPSIKVIHDQKLTHMRTVEIVRIICEGVVWTNFQKSAQLSGAMLSAAILGIPEVVNEFIMAYDSCSNWS 347 (419)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~t~L~~A~~~g~~e~v~~Ll~~~~~d~~~~ 347 (419)
.++++.+++.+. +++....-.||||+|+..|+.++|++|++. |+|++.+
T Consensus 147 ----------------------------~~~v~~Ll~~g~--~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~-gad~~~~ 195 (261)
T 2xai_A 147 ----------------------------RACVKKLLESGA--DVNQGKGQDSPLHAVARTASEELACLLMDF-GADTQAK 195 (261)
T ss_dssp ----------------------------HHHHHHHHHHTC--CTTCCBTTBCHHHHHHHHTCHHHHHHHHHT-TCCTTCC
T ss_pred ----------------------------HHHHHHHHHcCC--CCCCCCCCCChHHHHHHcCCHHHHHHHHHc-CCCCCCc
Confidence 133444445544 443322228999999999999999999999 9999999
Q ss_pred cCCCCchHHHHHhhchHHHHHHHhhcccc-----cceeeeccCCCCccchhcccccCCC
Q 014730 348 NQDGHTIFDHAVLHRREKVFNLIQGVNFT-----TFLFSSRDKSGNNILHLAGRLVPSS 401 (419)
Q Consensus 348 ~~~g~t~Lh~Av~~~~~~iv~~L~~~~~~-----~~~~~~~D~~G~t~Lh~A~~~~~~~ 401 (419)
|..|+||||+|+.++ +++++|++.+.+ .+.++.+|..|+||||+|++..-+.
T Consensus 196 d~~g~tpl~~A~~~~--~~~~~ll~~~~~~~l~~~~~~~~r~~~g~t~l~~~~~~~~p~ 252 (261)
T 2xai_A 196 NAEGKRPVELVPPES--PLAQLFLEREGPPSLMQLCRLRIRKCFGIQQHHKITKLVLPE 252 (261)
T ss_dssp CTTSCCGGGGSCTTC--THHHHHHHC-CCCCHHHHHHHHHHTTSCTTCGGGGGGSSSCH
T ss_pred CCCCCChhhhccccc--cHHHHHHhccCCccHHHHHHHHHHHHhchhccccCcccCCcH
Confidence 999999999999655 599999998521 2467789999999999999886654
No 7
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=3.9e-39 Score=295.82 Aligned_cols=246 Identities=15% Similarity=0.141 Sum_probs=218.1
Q ss_pred CCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCcccccc-CCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCC
Q 014730 28 PGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQ-DNHGHTAVIFCAAKGNLKALKVLLKYNPDLTNIRDSDG 106 (419)
Q Consensus 28 ~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~-~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g 106 (419)
+| .||||.|+ . .|+.+++++|++.| .+++.. +..|.||||+|+..|+.+++++|+++|++ ++.++..|
T Consensus 4 ~g-~~~L~~A~-~------~g~~~~v~~Ll~~g--~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g 72 (285)
T 1wdy_A 4 ED-NHLLIKAV-Q------NEDVDLVQQLLEGG--ANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGAD-PVLRKKNG 72 (285)
T ss_dssp HH-HHHHHHHH-H------TTCHHHHHHHHHTT--CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTC
T ss_pred cc-chHHHHHH-H------cCCHHHHHHHHHcC--CCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCC
Confidence 46 89999999 9 99999999999999 888887 78899999999999999999999999999 79999999
Q ss_pred chHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhhCCCCCcCC----------CCCCCc
Q 014730 107 YLPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLIAANLYDVALDLLKLHPTIGRDN----------IDSRRI 176 (419)
Q Consensus 107 ~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~----------~~~g~~ 176 (419)
.||||+|+..|+.+++++|+++|++++. .+..|.||||.|+..|+.+++++|++.|+++. .. +..|.|
T Consensus 73 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~~~~~~~~~~~g~t 150 (285)
T 1wdy_A 73 ATPFLLAAIAGSVKLLKLFLSKGADVNE-CDFYGFTAFMEAAVYGKVKALKFLYKRGANVN-LRRKTKEDQERLRKGGAT 150 (285)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTC-BCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTT-CCCCCCHHHHHTTCCCCC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCc-cCcccCCHHHHHHHhCCHHHHHHHHHhCCCcc-cccccHHHHHhhccCCCc
Confidence 9999999999999999999999999999 99999999999999999999999999998876 44 778999
Q ss_pred HHHHHHhCCCCCCCCCchhHHHHHHHhhhcccCCCCcccccccccccCCCCCCCCCCCccccccccCCCCCCCCCChhhH
Q 014730 177 VLNTLSQKPYAFASGSRLGRLRRLIYNCWCQQSCIPLEKERVPSIQSNDDQNVDGDTENFTVTSKMHPKESTPFGSTQQI 256 (419)
Q Consensus 177 ~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (419)
|||+|+..+.
T Consensus 151 ~L~~A~~~~~---------------------------------------------------------------------- 160 (285)
T 1wdy_A 151 ALMDAAEKGH---------------------------------------------------------------------- 160 (285)
T ss_dssp HHHHHHHHTC----------------------------------------------------------------------
T ss_pred HHHHHHHcCC----------------------------------------------------------------------
Confidence 9999987532
Q ss_pred HHHHhhHHHHHHHHHHHHhhhcCchhHHHHHHhhhhHhHHHHHHHHHhh-hhhccccc--hhhhhHHHHHHHHhCh----
Q 014730 257 TAIFGLMFHKLNRMLWNALMRLAPSIKVIHDQKLTHMRTVEIVRIICEG-VVWTNFQK--SAQLSGAMLSAAILGI---- 329 (419)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~~~~~--~~~~~t~L~~A~~~g~---- 329 (419)
.++++.+++. +. +++. ..+ .||||.|+..|+
T Consensus 161 ---------------------------------------~~~v~~Ll~~~~~--~~~~~~~~g-~t~l~~a~~~~~~~~~ 198 (285)
T 1wdy_A 161 ---------------------------------------VEVLKILLDEMGA--DVNACDNMG-RNALIHALLSSDDSDV 198 (285)
T ss_dssp ---------------------------------------HHHHHHHHHTSCC--CTTCCCTTS-CCHHHHHHHCSCTTTH
T ss_pred ---------------------------------------HHHHHHHHHhcCC--CCCccCCCC-CCHHHHHHHccccchH
Confidence 1233333433 22 2222 222 899999999999
Q ss_pred HHHHHHHHHhcCCccccccCCCCchHHHHHhhchHHHHHHHhhcccccceeeeccCCCCccchhcccccCCC
Q 014730 330 PEVVNEFIMAYDSCSNWSNQDGHTIFDHAVLHRREKVFNLIQGVNFTTFLFSSRDKSGNNILHLAGRLVPSS 401 (419)
Q Consensus 330 ~e~v~~Ll~~~~~d~~~~~~~g~t~Lh~Av~~~~~~iv~~L~~~~~~~~~~~~~D~~G~t~Lh~A~~~~~~~ 401 (419)
.+++++|++. |++++.++..|+||||+|+.+++.+++++|++. .+.+++.+|..|+||||+|++.|+.+
T Consensus 199 ~~i~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--~g~~~~~~~~~g~t~l~~A~~~~~~~ 267 (285)
T 1wdy_A 199 EAITHLLLDH-GADVNVRGERGKTPLILAVEKKHLGLVQRLLEQ--EHIEINDTDSDGKTALLLAVELKLKK 267 (285)
T ss_dssp HHHHHHHHHT-TCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHS--SSCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHHHHc-CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhc--cCCCccccCCCCCcHHHHHHHcCcHH
Confidence 9999999999 999999999999999999999999999999995 47788999999999999999998755
No 8
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=4.4e-39 Score=288.02 Aligned_cols=231 Identities=20% Similarity=0.196 Sum_probs=209.1
Q ss_pred ccccccCCCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCC
Q 014730 20 ALTAKIVEPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCAAKGNLKALKVLLKYNPDLT 99 (419)
Q Consensus 20 ~~~~~~~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~ 99 (419)
+++.+ +..| .||||+|+ . .|+.+++++|++.| .+++..+..|.||||+|+..|+.+++++|+++|++ +
T Consensus 3 ~~~~~-~~~g-~t~L~~A~-~------~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~ 70 (237)
T 3b7b_A 3 NFKME-HQNK-RSPLHAAA-E------AGHVDICHMLVQAG--ANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGAL-V 70 (237)
T ss_dssp CCCCS-SCCS-CCHHHHHH-H------HTCHHHHHHHHHTT--CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC-C
T ss_pred Ccccc-cCCC-CCHHHHHH-H------cCcHHHHHHHHHcC--CCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCC-C
Confidence 45666 8889 99999999 9 99999999999999 89999999999999999999999999999999998 7
Q ss_pred ccCCCCCchHHHHHHHcCCHHHHHHHHhcC-CCCccccCCCCCcHHHHHHHcCcHHHHHHHHhhCCCCCcCCCCCCCcHH
Q 014730 100 NIRDSDGYLPVHNAAYYGHKDTFQYLLEAT-NGVDIYRGNDGAMVLLFLIAANLYDVALDLLKLHPTIGRDNIDSRRIVL 178 (419)
Q Consensus 100 ~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g-~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l 178 (419)
+.++..|.||||+|+..|+.+++++|++.| .+++. .+..|.||||.|+..++.+++++|++.|+++. .++..|
T Consensus 71 ~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g---- 144 (237)
T 3b7b_A 71 DPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNC-QDDGGWTPMIWATEYKHVDLVKLLLSKGSDIN-IRDNEE---- 144 (237)
T ss_dssp CCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTS----
T ss_pred CCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCccc-CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-ccCCCC----
Confidence 889999999999999999999999999998 78888 89999999999999999999999999987754 221111
Q ss_pred HHHHhCCCCCCCCCchhHHHHHHHhhhcccCCCCcccccccccccCCCCCCCCCCCccccccccCCCCCCCCCChhhHHH
Q 014730 179 NTLSQKPYAFASGSRLGRLRRLIYNCWCQQSCIPLEKERVPSIQSNDDQNVDGDTENFTVTSKMHPKESTPFGSTQQITA 258 (419)
Q Consensus 179 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (419)
T Consensus 145 -------------------------------------------------------------------------------- 144 (237)
T 3b7b_A 145 -------------------------------------------------------------------------------- 144 (237)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhHHHHHHHHHHHHhhhcCchhHHHHHHhhhhHhHHHHHHHHHhhhhhccccchhhhhHHHHHHHHhChHHHHHHHHH
Q 014730 259 IFGLMFHKLNRMLWNALMRLAPSIKVIHDQKLTHMRTVEIVRIICEGVVWTNFQKSAQLSGAMLSAAILGIPEVVNEFIM 338 (419)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~t~L~~A~~~g~~e~v~~Ll~ 338 (419)
.||||.|+..|+.+++++|++
T Consensus 145 -----------------------------------------------------------~t~L~~A~~~~~~~~~~~Ll~ 165 (237)
T 3b7b_A 145 -----------------------------------------------------------NICLHWAAFSGCVDIAEILLA 165 (237)
T ss_dssp -----------------------------------------------------------CCHHHHHHHHCCHHHHHHHHT
T ss_pred -----------------------------------------------------------CCHHHHHHHCCCHHHHHHHHH
Confidence 568888888999999999999
Q ss_pred hcCCccccccCCCCchHHHHHhhchHHHHHHHhhcccccceeeeccCCCCccchhcccccCCCCCCCchHHHHHhhh
Q 014730 339 AYDSCSNWSNQDGHTIFDHAVLHRREKVFNLIQGVNFTTFLFSSRDKSGNNILHLAGRLVPSSEVAGAALQMQRELQ 415 (419)
Q Consensus 339 ~~~~d~~~~~~~g~t~Lh~Av~~~~~~iv~~L~~~~~~~~~~~~~D~~G~t~Lh~A~~~~~~~~~~~~~~~~~~~~~ 415 (419)
. |++++..+..|+||||+|+++++.+++++|+++ +.+++.+|.+|+||||+|++.|.. ...+||.++|+
T Consensus 166 ~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---gad~~~~d~~g~t~l~~A~~~~~~----~~~~~l~~~l~ 234 (237)
T 3b7b_A 166 A-KCDLHAVNIHGDSPLHIAARENRYDCVVLFLSR---DSDVTLKNKEGETPLQCASLNSQV----WSALQMSKALQ 234 (237)
T ss_dssp T-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTT---TCCTTCCCTTSCCHHHHSCTTCHH----HHHHHHHHHHH
T ss_pred c-CCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHc---CCCCCccCCCCCCHHHHHHHHHHH----HHHHHHHHHhh
Confidence 9 999999999999999999999999999999999 667889999999999999988764 37888888875
No 9
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.3e-38 Score=291.61 Aligned_cols=153 Identities=17% Similarity=0.128 Sum_probs=126.1
Q ss_pred CccCCChHHHHHHHHhC----------CcccccccCCCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCC
Q 014730 1 MIEKNDWPGVEDFVTNH----------PDALTAKIVEPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDN 70 (419)
Q Consensus 1 A~~~g~~~~v~~ll~~~----------~~~~~~~~~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~ 70 (419)
|++.|+.+.+..++... ...++.+ +..| .||||+|| . .|+.+++++|++.| .+++.+|.
T Consensus 22 Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~g-~t~L~~Aa-~------~g~~~~v~~Ll~~g--~~~~~~~~ 90 (285)
T 3d9h_A 22 ASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGD-AVSD-WSPMHEAA-I------HGHQLSLRNLISQG--WAVNIITA 90 (285)
T ss_dssp --------------------CCSEECCCCTTCSS-SCCS-CCHHHHHH-H------TTCHHHHHHHHHTT--CCSCEECT
T ss_pred HhhcCCCCCcccCCCCccccccchhhhhCcccCC-CccC-CCHHHHHH-H------cCCHHHHHHHHHCC--CCCCCcCC
Confidence 68889988888766542 2234566 8889 99999999 9 99999999999999 89999999
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHHHc
Q 014730 71 HGHTAVIFCAAKGNLKALKVLLKYNPDLTNIRDSDGYLPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLIAA 150 (419)
Q Consensus 71 ~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~ 150 (419)
.|.||||+|+..|+.+++++|+++|++ ++.++..|.||||+|+..|+.+++++|++.|++++. +..|.||||+|+..
T Consensus 91 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~~g~t~L~~A~~~ 167 (285)
T 3d9h_A 91 DHVSPLHEACLGGHLSCVKILLKHGAQ-VNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQP--ESDLASPIHEAARR 167 (285)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSC--SCTTSCHHHHHHHH
T ss_pred CCCCHHHHHHHCCcHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCC--CCCCCCHHHHHHHc
Confidence 999999999999999999999999999 799999999999999999999999999999998876 44599999999999
Q ss_pred CcHHHHHHHHhhCCCCC
Q 014730 151 NLYDVALDLLKLHPTIG 167 (419)
Q Consensus 151 ~~~~~~~~Ll~~~~~~~ 167 (419)
|+.+++++|++.|+++.
T Consensus 168 g~~~~v~~Ll~~g~~~~ 184 (285)
T 3d9h_A 168 GHVECVNSLIAYGGNID 184 (285)
T ss_dssp TCHHHHHHHHHTTCCTT
T ss_pred CCHHHHHHHHHCCCCCC
Confidence 99999999999988765
No 10
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=2.1e-38 Score=290.91 Aligned_cols=251 Identities=14% Similarity=0.069 Sum_probs=180.4
Q ss_pred ccccCCCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCcc---ccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCC
Q 014730 22 TAKIVEPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQT---LARQDNHGHTAVIFCAAKGNLKALKVLLKYNPDL 98 (419)
Q Consensus 22 ~~~~~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~---~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~ 98 (419)
+.+ |..| .||||+|| . .|+.+++++|++.| .+ ++.+|..|.||||+|+..|+.+++++|+++|++
T Consensus 3 ~~~-d~~g-~t~L~~A~-~------~g~~~~v~~Ll~~g--~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~- 70 (282)
T 1oy3_D 3 GYV-TEDG-DTALHLAV-I------HQHEPFLDFLLGFS--AGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAG- 70 (282)
T ss_dssp CCC-CTTC-CCHHHHHH-H------TTCHHHHHHHHHHH--TTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-
T ss_pred Ccc-CCCC-CcHHHHHH-H------cCCHHHHHHHHhcC--CCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-
Confidence 455 8999 99999999 9 99999999999998 65 888999999999999999999999999999999
Q ss_pred CccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccc------------cCCCCCcHHHHHHHcCcHH-HHHHHHhhCCC
Q 014730 99 TNIRDSDGYLPVHNAAYYGHKDTFQYLLEATNGVDIY------------RGNDGAMVLLFLIAANLYD-VALDLLKLHPT 165 (419)
Q Consensus 99 ~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~------------~~~~g~t~l~~a~~~~~~~-~~~~Ll~~~~~ 165 (419)
++.++..|.||||+|+..|+.+++++|++.|++.... ....+.++++.+...+... ....+...+.+
T Consensus 71 ~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (282)
T 1oy3_D 71 VLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQ 150 (282)
T ss_dssp SSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGG
T ss_pred CCCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhc
Confidence 7999999999999999999999999999998764331 1223455666555544333 33333334455
Q ss_pred CCcCCCCCCCcHHHHHHhCCCCCCCCCchhHHHHHHHhhhcccCCCCcccccccccccCCCCCCCCCCCccccccccCCC
Q 014730 166 IGRDNIDSRRIVLNTLSQKPYAFASGSRLGRLRRLIYNCWCQQSCIPLEKERVPSIQSNDDQNVDGDTENFTVTSKMHPK 245 (419)
Q Consensus 166 ~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (419)
+. ..+..|.||||+|+..+.
T Consensus 151 ~~-~~~~~g~t~L~~A~~~g~----------------------------------------------------------- 170 (282)
T 1oy3_D 151 LE-AENYDGHTPLHVAVIHKD----------------------------------------------------------- 170 (282)
T ss_dssp TT-CCCTTSCCHHHHHHHTTC-----------------------------------------------------------
T ss_pred CC-CcCCCCcCHHHHHHHcCC-----------------------------------------------------------
Confidence 55 678889999999888632
Q ss_pred CCCCCCChhhHHHHHhhHHHHHHHHHHHHhhhcCchhHHHHHHhhhhHhHHHHHHHHHhhhhhccccchh---hhhHHHH
Q 014730 246 ESTPFGSTQQITAIFGLMFHKLNRMLWNALMRLAPSIKVIHDQKLTHMRTVEIVRIICEGVVWTNFQKSA---QLSGAML 322 (419)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~---~~~t~L~ 322 (419)
.++++.|++.+. +++..+ + .||||
T Consensus 171 --------------------------------------------------~~~v~~Ll~~g~--~~~~~~~~~g-~tpL~ 197 (282)
T 1oy3_D 171 --------------------------------------------------AEMVRLLRDAGA--DLNKPEPTCG-RTPLH 197 (282)
T ss_dssp --------------------------------------------------HHHHHHHHHHTC--CTTCCCTTTC-CCHHH
T ss_pred --------------------------------------------------HHHHHHHHHcCC--CCCCCCCCCC-cCHHH
Confidence 133334444443 333322 3 89999
Q ss_pred HHHHhChHHHHHHHHHhcCCccccccCCCCchHHHHHhhchHHHHHHHhhcccccceeeeccCCCCccchhcccccCCC
Q 014730 323 SAAILGIPEVVNEFIMAYDSCSNWSNQDGHTIFDHAVLHRREKVFNLIQGVNFTTFLFSSRDKSGNNILHLAGRLVPSS 401 (419)
Q Consensus 323 ~A~~~g~~e~v~~Ll~~~~~d~~~~~~~g~t~Lh~Av~~~~~~iv~~L~~~~~~~~~~~~~D~~G~t~Lh~A~~~~~~~ 401 (419)
+|+..|+.++|++|++. |++++.++..|+||||+|+.+++.+++++|+++ +.+++.+|..|.|||++|....+.+
T Consensus 198 ~A~~~~~~~~v~~Ll~~-gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~---ga~~~~~~~~g~tpl~~a~~~~~~~ 272 (282)
T 1oy3_D 198 LAVEAQAASVLELLLKA-GADPTARMYGGRTPLGSALLRPNPILARLLRAH---GAPEPEDGGDKLSPCSSSGSDSDSD 272 (282)
T ss_dssp HHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHT---TCCCCCCC-----------------
T ss_pred HHHHcCCHHHHHHHHHc-CCCCcccccCCCCHHHHHHHcCCcHHHHHHHHc---CCCcCcCCCcccccccccCCccccc
Confidence 99999999999999999 999999999999999999999999999999999 6778999999999999999887655
No 11
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=1.2e-37 Score=279.25 Aligned_cols=219 Identities=15% Similarity=0.094 Sum_probs=189.7
Q ss_pred ccccCCCCCccHHHHHHHhhcccCCCchHHHHHHHHh----hCCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCC
Q 014730 22 TAKIVEPGSKTIFHTIAELLVDDDSDEATCLLDKLAT----KVDPQTLARQDNHGHTAVIFCAAKGNLKALKVLLKYNPD 97 (419)
Q Consensus 22 ~~~~~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~----~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~ 97 (419)
+.+ |.+| .||||+|| . .|+.+++++|++ .+ .+++..|..|.||||+|+..|+.+++++|+++|++
T Consensus 3 ~~~-d~~g-~t~L~~A~-~------~g~~~~v~~Ll~~~~~~~--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 71 (241)
T 1k1a_A 3 TRA-DEDG-DTPLHIAV-V------QGNLPAVHRLVNLFQQGG--RELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGAS 71 (241)
T ss_dssp -----CTT-CCHHHHHH-H------TTCHHHHHHHHHHHHHTT--CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred ccc-CCCC-CcHHHHHH-H------cCCHHHHHHHHHHHHhcC--CCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 345 8899 99999999 9 999999999997 56 88999999999999999999999999999999999
Q ss_pred CCccCCCCCchHHHHHHHcCCHHHHHHHHhcCC----CCccccCCCCCcHHHHHHHcCcHHHHHHHHhhCCCCCcCCC-C
Q 014730 98 LTNIRDSDGYLPVHNAAYYGHKDTFQYLLEATN----GVDIYRGNDGAMVLLFLIAANLYDVALDLLKLHPTIGRDNI-D 172 (419)
Q Consensus 98 ~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~----~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~-~ 172 (419)
++.++..|.||||+|+..|+.+++++|++.|+ +++. .+..|.||||.|+..|+.+++++|++.|+++. ..+ .
T Consensus 72 -~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~ 148 (241)
T 1k1a_A 72 -PMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEA-RNYDGLTALHVAVNTECQETVQLLLERGADID-AVDIK 148 (241)
T ss_dssp -TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTT
T ss_pred -ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccc-cCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcc-ccccc
Confidence 78999999999999999999999999999998 6677 88999999999999999999999999988765 221 1
Q ss_pred CCCcHHHHHHhCCCCCCCCCchhHHHHHHHhhhcccCCCCcccccccccccCCCCCCCCCCCccccccccCCCCCCCCCC
Q 014730 173 SRRIVLNTLSQKPYAFASGSRLGRLRRLIYNCWCQQSCIPLEKERVPSIQSNDDQNVDGDTENFTVTSKMHPKESTPFGS 252 (419)
Q Consensus 173 ~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (419)
.|
T Consensus 149 ~g------------------------------------------------------------------------------ 150 (241)
T 1k1a_A 149 SG------------------------------------------------------------------------------ 150 (241)
T ss_dssp TC------------------------------------------------------------------------------
T ss_pred CC------------------------------------------------------------------------------
Confidence 11
Q ss_pred hhhHHHHHhhHHHHHHHHHHHHhhhcCchhHHHHHHhhhhHhHHHHHHHHHhhhhhccccchhhhhHHHHHHHHhChHHH
Q 014730 253 TQQITAIFGLMFHKLNRMLWNALMRLAPSIKVIHDQKLTHMRTVEIVRIICEGVVWTNFQKSAQLSGAMLSAAILGIPEV 332 (419)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~t~L~~A~~~g~~e~ 332 (419)
.||||.|+..|+.++
T Consensus 151 -----------------------------------------------------------------~t~L~~A~~~~~~~~ 165 (241)
T 1k1a_A 151 -----------------------------------------------------------------RSPLIHAVENNSLSM 165 (241)
T ss_dssp -----------------------------------------------------------------CCHHHHHHHTTCHHH
T ss_pred -----------------------------------------------------------------CcHHHHHHHcCCHHH
Confidence 568888888888888
Q ss_pred HHHHHHhcCCccccccCCCCchHHHHHhhchHHHHHHHhhcccccceeeeccCCCCccchhcccccCCC
Q 014730 333 VNEFIMAYDSCSNWSNQDGHTIFDHAVLHRREKVFNLIQGVNFTTFLFSSRDKSGNNILHLAGRLVPSS 401 (419)
Q Consensus 333 v~~Ll~~~~~d~~~~~~~g~t~Lh~Av~~~~~~iv~~L~~~~~~~~~~~~~D~~G~t~Lh~A~~~~~~~ 401 (419)
+++|++. |++++..+..|+||||+|+.+++.+++++|+++ +.+++.+|..|+||||+|++.|..+
T Consensus 166 v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---ga~~~~~~~~g~tpl~~A~~~~~~~ 230 (241)
T 1k1a_A 166 VQLLLQH-GANVNAQMYSGSSALHSASGRGLLPLVRTLVRS---GADSSLKNCHNDTPLMVARSRRVID 230 (241)
T ss_dssp HHHHHHT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHT---TCCTTCCCTTSCCTTTTCSSHHHHH
T ss_pred HHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhc---CCCCCCcCCCCCCHHHHHHhcCcHH
Confidence 8888888 888888888888888888888888888888888 5667888888888888888776543
No 12
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=4.4e-38 Score=297.71 Aligned_cols=276 Identities=18% Similarity=0.141 Sum_probs=224.3
Q ss_pred ccccccCCCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCC
Q 014730 20 ALTAKIVEPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCAAKGNLKALKVLLKYNPDLT 99 (419)
Q Consensus 20 ~~~~~~~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~ 99 (419)
..+.. +..| .|+||.|+ . .|+.+.++.|+... +.+++..|..|.||||+|+..|+.+++++|+++|++ +
T Consensus 16 ~~~~~-~~~~-~~~L~~A~-~------~g~~~~v~~ll~~~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~ 84 (351)
T 3utm_A 16 KAVLT-GEYK-KDELLEAA-R------SGNEEKLMALLTPL-NVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGAD-V 84 (351)
T ss_dssp HHHHH-HHHH-HHHHHHHH-H------HTCHHHHHHHCCTT-TTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCC-T
T ss_pred eeeee-cccc-chhHHHHH-H------cCCHHHHHHHHHhc-CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-C
Confidence 33344 6678 99999999 9 99999999999874 488999999999999999999999999999999999 7
Q ss_pred ccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhhCCCCCcCCCCCCCcHHH
Q 014730 100 NIRDSDGYLPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLIAANLYDVALDLLKLHPTIGRDNIDSRRIVLN 179 (419)
Q Consensus 100 ~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~ 179 (419)
+.++..|.||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|++.|+++. ..+..|.+|++
T Consensus 85 ~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~~~l~ 162 (351)
T 3utm_A 85 HAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNA-MDLWQFTPLHEAASKNRVEVCSLLLSHGADPT-LVNCHGKSAVD 162 (351)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHH
T ss_pred CccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc-cccCCCCcchH
Confidence 99999999999999999999999999999999999 99999999999999999999999999999987 88999999999
Q ss_pred HHHhCCCCCCCCCchhHHHHHHHhhhcccCCCCcccccccccccCCCCCCCCCCCccccccccCCCCCCCCCChhhHHHH
Q 014730 180 TLSQKPYAFASGSRLGRLRRLIYNCWCQQSCIPLEKERVPSIQSNDDQNVDGDTENFTVTSKMHPKESTPFGSTQQITAI 259 (419)
Q Consensus 180 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (419)
+++.... ...+.+.
T Consensus 163 ~a~~~~~----------~~~~~~~-------------------------------------------------------- 176 (351)
T 3utm_A 163 MAPTPEL----------RERLTYE-------------------------------------------------------- 176 (351)
T ss_dssp HCSSHHH----------HHHHHHH--------------------------------------------------------
T ss_pred HHhhhhh----------HHHHHhh--------------------------------------------------------
Confidence 8764310 0000000
Q ss_pred HhhHHHHHHHHHHHHhhhcCchhHHHHHHhhhhHhHHHHHHHHHhhhhhccccchhhhhHHHHHHHHh---ChHHHHHHH
Q 014730 260 FGLMFHKLNRMLWNALMRLAPSIKVIHDQKLTHMRTVEIVRIICEGVVWTNFQKSAQLSGAMLSAAIL---GIPEVVNEF 336 (419)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~t~L~~A~~~---g~~e~v~~L 336 (419)
. .+...+.+...+.. ..+..+...... .........||||.|+.. +..+++++|
T Consensus 177 ----------~---------~~~~~~~~~~~~~~---~~~~~~l~~~~~-~~~~~~~~~t~L~~A~~~~~~~~~~~~~~L 233 (351)
T 3utm_A 177 ----------F---------KGHSLLQAAREADL---AKVKKTLALEII-NFKQPQSHETALHCAVASLHPKRKQVAELL 233 (351)
T ss_dssp ----------H---------HHHHHHHHHHTTCH---HHHHHHTTTCCT-TCCCTTTCCCHHHHHHHCCSTTHHHHHHHH
T ss_pred ----------h---------cccHHHHHHHhccH---HHHHHHHHhhcc-cccCCCCCCCHHHHHHHHhCccHHHHHHHH
Confidence 0 00111122222222 222222222210 221222228999999999 679999999
Q ss_pred HHhcCCccccccCCCCchHHHHHhhchHHHHHHHhhcccccceeeeccCCCCccchhcccccCCC
Q 014730 337 IMAYDSCSNWSNQDGHTIFDHAVLHRREKVFNLIQGVNFTTFLFSSRDKSGNNILHLAGRLVPSS 401 (419)
Q Consensus 337 l~~~~~d~~~~~~~g~t~Lh~Av~~~~~~iv~~L~~~~~~~~~~~~~D~~G~t~Lh~A~~~~~~~ 401 (419)
++. |++++.++..|+||||+|+.+++.+++++|+++ +.+++.+|..|+||||+|++.|+.+
T Consensus 234 l~~-g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~---ga~~n~~d~~g~t~L~~A~~~~~~~ 294 (351)
T 3utm_A 234 LRK-GANVNEKNKDFMTPLHVAAERAHNDVMEVLHKH---GAKMNALDSLGQTALHRAALAGHLQ 294 (351)
T ss_dssp HHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCTTSCCHHHHHHHHTCHH
T ss_pred HHc-CCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHC---CCCCCCcCCCCCCHHHHHHHcCcHH
Confidence 999 999999999999999999999999999999999 6788999999999999999998865
No 13
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=8e-39 Score=306.06 Aligned_cols=248 Identities=16% Similarity=0.121 Sum_probs=209.7
Q ss_pred CCCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccC-CCCChHHHHHHHcCCHHHHHHHH--------hcCC
Q 014730 26 VEPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQD-NHGHTAVIFCAAKGNLKALKVLL--------KYNP 96 (419)
Q Consensus 26 ~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~-~~g~t~L~~A~~~g~~~~~~~Ll--------~~~~ 96 (419)
+..| .||||+|+ . .+. +++++|+. ..++..| ..|.||||+|+..|+.+++++|+ +.|+
T Consensus 91 ~~~g-~t~L~~Aa-~------~~~-~~~~~L~~----~~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga 157 (373)
T 2fo1_E 91 EPES-PIKLHTEA-A------GSY-AITEPITR----ESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGA 157 (373)
T ss_dssp ---C-CCHHHHHH-H------SSS-CCCSCCST----TTTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCC
T ss_pred CCCC-ccHHHHHh-c------CCc-hHHHHhcc----ccccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCC
Confidence 7789 99999999 7 665 77887764 4578888 79999999999999998877776 7899
Q ss_pred CCCccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhhC---CCCCcCCCCC
Q 014730 97 DLTNIRDSDGYLPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLIAANLYDVALDLLKLH---PTIGRDNIDS 173 (419)
Q Consensus 97 ~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~---~~~~~~~~~~ 173 (419)
+ ++.+|..|.||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|++.+ .++. ..|..
T Consensus 158 ~-vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~-~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-~~d~~ 234 (373)
T 2fo1_E 158 D-VNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTI-YNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIE-ELDRN 234 (373)
T ss_dssp C-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCC-CCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTS-CCCTT
T ss_pred C-CcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcc-cCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChh-hcCCC
Confidence 8 899999999999999999999999999999999999 9999999999999999999999999987 5666 78999
Q ss_pred CCcHHHHHHhCCCCCCCCCchhHHHHHHHhhhcccCCCCcccccccccccCCCCCCCCCCCccccccccCCCCCCCCCCh
Q 014730 174 RRIVLNTLSQKPYAFASGSRLGRLRRLIYNCWCQQSCIPLEKERVPSIQSNDDQNVDGDTENFTVTSKMHPKESTPFGST 253 (419)
Q Consensus 174 g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (419)
|.||||+|+..+... .
T Consensus 235 g~t~L~~A~~~~~~~----~------------------------------------------------------------ 250 (373)
T 2fo1_E 235 GMTALMIVAHNEGRD----Q------------------------------------------------------------ 250 (373)
T ss_dssp SCCHHHHHHHSCSTT----H------------------------------------------------------------
T ss_pred CCCHHHHHHHhCCcc----h------------------------------------------------------------
Confidence 999999998863100 0
Q ss_pred hhHHHHHhhHHHHHHHHHHHHhhhcCchhHHHHHHhhhhHhHHHHHHHHHhhhhhccccc----------hhhhhHHHHH
Q 014730 254 QQITAIFGLMFHKLNRMLWNALMRLAPSIKVIHDQKLTHMRTVEIVRIICEGVVWTNFQK----------SAQLSGAMLS 323 (419)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~----------~~~~~t~L~~ 323 (419)
+++++.|++.+. +++. ..+ .||||+
T Consensus 251 ------------------------------------------~~~v~~Ll~~g~--~~~~~~~~~~~~~d~~g-~t~Lh~ 285 (373)
T 2fo1_E 251 ------------------------------------------VASAKLLVEKGA--KVDYDGAARKDSEKYKG-RTALHY 285 (373)
T ss_dssp ------------------------------------------HHHHHHHHHHTC--CSSCCSGGGTSSSSCCC-CCTHHH
T ss_pred ------------------------------------------HHHHHHHHHCCC--CcccccccccCcccccC-CCHHHH
Confidence 123333333333 2221 122 799999
Q ss_pred HHHhChHHHHHHHHHhcCCccccccCCCCchHHHHHhhchHHHHHHHhhcccccceeeeccCCCCccchhcccccCCC
Q 014730 324 AAILGIPEVVNEFIMAYDSCSNWSNQDGHTIFDHAVLHRREKVFNLIQGVNFTTFLFSSRDKSGNNILHLAGRLVPSS 401 (419)
Q Consensus 324 A~~~g~~e~v~~Ll~~~~~d~~~~~~~g~t~Lh~Av~~~~~~iv~~L~~~~~~~~~~~~~D~~G~t~Lh~A~~~~~~~ 401 (419)
|+..|+.++|++|++.++++++.++..|+||||+|+.+++.+++++|+++ +.+++.+|..|+||||+|++.|+.+
T Consensus 286 A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~---gad~~~~d~~g~t~l~~A~~~g~~~ 360 (373)
T 2fo1_E 286 AAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQ---GASVEAVDATDHTARQLAQANNHHN 360 (373)
T ss_dssp HHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT---TCCSSCCCSSSCCHHHHHHHTTCHH
T ss_pred HHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHc---CCCccCCCCCCCCHHHHHHHcCCHH
Confidence 99999999999999983499999999999999999999999999999999 6788999999999999999998865
No 14
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=1.2e-37 Score=281.78 Aligned_cols=228 Identities=19% Similarity=0.202 Sum_probs=161.1
Q ss_pred ccccccCCCCCccHHHHHHHhhcccCCCc-------------hHHHHHHHHhhCCCccccc-cCCCCChHHHHHHHcCCH
Q 014730 20 ALTAKIVEPGSKTIFHTIAELLVDDDSDE-------------ATCLLDKLATKVDPQTLAR-QDNHGHTAVIFCAAKGNL 85 (419)
Q Consensus 20 ~~~~~~~~~g~~t~L~~A~~~~~~~~~~g-------------~~~~v~~Ll~~~~~~~~~~-~~~~g~t~L~~A~~~g~~ 85 (419)
++|.+ |.+| .||||+|+ . .| +.+++++|++.| .+++. .|..|.||||+|+..|+.
T Consensus 2 dvn~~-d~~g-~tpL~~A~-~------~g~~~~~~~~~~~~~~~~~v~~Ll~~g--~~~~~~~d~~g~t~L~~A~~~g~~ 70 (253)
T 1yyh_A 2 DVNVR-GPDG-FTPLMIAS-C------SGGGLETGNSEEEEDAPAVISDFIYQG--ASLHNQTDRTGETALHLAARYSRS 70 (253)
T ss_dssp -------------------------------------------------------------CCCTTSCCHHHHHHHTTCH
T ss_pred CCCCC-CCCC-CcHHHHHH-h------ccccccccchhhcCCChHHHHHHHHcc--CCcccccCCCCCcHHHHHHHcCCH
Confidence 57788 9999 99999999 8 77 899999999999 66654 589999999999999999
Q ss_pred HHHHHHHhcCCCCCccCCCCCchHHHHHHHcCCHHHHHHHHhcCC-CCccccCCCCCcHHHHHHHcCcHHHHHHHHhhCC
Q 014730 86 KALKVLLKYNPDLTNIRDSDGYLPVHNAAYYGHKDTFQYLLEATN-GVDIYRGNDGAMVLLFLIAANLYDVALDLLKLHP 164 (419)
Q Consensus 86 ~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~-~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~ 164 (419)
+++++|+++|++ ++.++..|.||||+|+..|+.+++++|++.|+ +++. .+..|.||||+|+..|+.+++++|++.|+
T Consensus 71 ~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 148 (253)
T 1yyh_A 71 DAAKRLLEASAD-ANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDA-RMHDGTTPLILAARLAVEGMLEDLINSHA 148 (253)
T ss_dssp HHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTC-CCTTCCCHHHHHHHHTCSSHHHHHHHTTC
T ss_pred HHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccc-cCCCCCcHHHHHHHcChHHHHHHHHHcCC
Confidence 999999999999 79999999999999999999999999999987 7888 89999999999999999999999999999
Q ss_pred CCCcCCCCCCCcHHHHHHhCCCCCCCCCchhHHHHHHHhhhcccCCCCcccccccccccCCCCCCCCCCCccccccccCC
Q 014730 165 TIGRDNIDSRRIVLNTLSQKPYAFASGSRLGRLRRLIYNCWCQQSCIPLEKERVPSIQSNDDQNVDGDTENFTVTSKMHP 244 (419)
Q Consensus 165 ~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (419)
++. .+|..|.||||+|+..+.
T Consensus 149 ~~~-~~d~~g~t~L~~A~~~~~---------------------------------------------------------- 169 (253)
T 1yyh_A 149 DVN-AVDDLGKSALHWAAAVNN---------------------------------------------------------- 169 (253)
T ss_dssp CTT-CBCTTSCBHHHHHHHHTC----------------------------------------------------------
T ss_pred CCC-CcCCCCCCHHHHHHHcCC----------------------------------------------------------
Confidence 887 788888888888877531
Q ss_pred CCCCCCCChhhHHHHHhhHHHHHHHHHHHHhhhcCchhHHHHHHhhhhHhHHHHHHHHHhhhhhccccch--hhhhHHHH
Q 014730 245 KESTPFGSTQQITAIFGLMFHKLNRMLWNALMRLAPSIKVIHDQKLTHMRTVEIVRIICEGVVWTNFQKS--AQLSGAML 322 (419)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~--~~~~t~L~ 322 (419)
.++++.|++.+. +++.. .+ .||||
T Consensus 170 ---------------------------------------------------~~~v~~Ll~~ga--~~~~~~~~g-~tpL~ 195 (253)
T 1yyh_A 170 ---------------------------------------------------VDAAVVLLKNGA--NKDMQNNRE-ETPLF 195 (253)
T ss_dssp ---------------------------------------------------HHHHHHHHHTTC--CTTCCCTTS-CCHHH
T ss_pred ---------------------------------------------------HHHHHHHHHcCC--CCCCcCCCC-CCHHH
Confidence 123333344433 33222 22 78888
Q ss_pred HHHHhChHHHHHHHHHhcCCccccccCCCCchHHHHHhhchHHHHHHHhhcc
Q 014730 323 SAAILGIPEVVNEFIMAYDSCSNWSNQDGHTIFDHAVLHRREKVFNLIQGVN 374 (419)
Q Consensus 323 ~A~~~g~~e~v~~Ll~~~~~d~~~~~~~g~t~Lh~Av~~~~~~iv~~L~~~~ 374 (419)
+|+..|+.++|++|++. |++++.++..|+||||+|+++++.+++++|....
T Consensus 196 ~A~~~~~~~~v~~Ll~~-ga~~~~~d~~g~tpl~~A~~~g~~~i~~~l~~~~ 246 (253)
T 1yyh_A 196 LAAREGSYETAKVLLDH-FANRDITDHMDRLPRDIAQERMHHDIVRLLDLEH 246 (253)
T ss_dssp HHHHHTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHC--
T ss_pred HHHHCCCHHHHHHHHHc-CCCccccccCCCCHHHHHHHcCCHHHHHHHHHHh
Confidence 88888888888888888 8888888888888888888888888888888773
No 15
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=1.8e-37 Score=295.76 Aligned_cols=255 Identities=13% Similarity=0.039 Sum_probs=213.5
Q ss_pred cccccccCCCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCC
Q 014730 19 DALTAKIVEPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCAAKGNLKALKVLLKYNPDL 98 (419)
Q Consensus 19 ~~~~~~~~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~ 98 (419)
.+.+.. |..| .||||+|| . .|+.++|++|++.| .+++..|..|.||||+|+..|+.+++++|+++|++
T Consensus 11 ~~~~~~-d~~g-~t~L~~Aa-~------~g~~~~v~~Ll~~g--~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~- 78 (364)
T 3ljn_A 11 LNRIKS-DDEN-MEKIHVAA-R------KGQTDEVRRLIETG--VSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEV- 78 (364)
T ss_dssp -----C-CHHH-HHHHHHHH-H------HTCHHHHHHHHHTT--CCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCC-
T ss_pred CCcccc-CCCC-CCHHHHHH-H------cCCHHHHHHHHHcC--CCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCC-
Confidence 344555 8889 99999999 9 99999999999999 99999999999999999999999999999999986
Q ss_pred CccCCCCCchHHHHHHHcCCHHHHHHHHhc----CCCCccc----------------cCCCCCcHHHHHHHcC--cHHHH
Q 014730 99 TNIRDSDGYLPVHNAAYYGHKDTFQYLLEA----TNGVDIY----------------RGNDGAMVLLFLIAAN--LYDVA 156 (419)
Q Consensus 99 ~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~----g~~~~~~----------------~~~~g~t~l~~a~~~~--~~~~~ 156 (419)
+ .+..|.||||+|+..|+.+++++|++. |++++.. .+..|.||||+|+..| +.+++
T Consensus 79 ~--~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v 156 (364)
T 3ljn_A 79 H--SLWHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMI 156 (364)
T ss_dssp C--CCBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHH
T ss_pred c--cccCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHH
Confidence 2 345799999999999999999999999 6665431 4567999999999999 99999
Q ss_pred HHHHhhCCCCCcCCCCCCCcHHHHHHhCCCCCCCCCchhHHHHHHHhhhcccCCCCcccccccccccCCCCCCCCCCCcc
Q 014730 157 LDLLKLHPTIGRDNIDSRRIVLNTLSQKPYAFASGSRLGRLRRLIYNCWCQQSCIPLEKERVPSIQSNDDQNVDGDTENF 236 (419)
Q Consensus 157 ~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (419)
++|++.|+++. ..|..|.||||+|+..+..
T Consensus 157 ~~Ll~~ga~~~-~~d~~g~t~L~~A~~~g~~------------------------------------------------- 186 (364)
T 3ljn_A 157 KILVQLGASPT-AKDKADETPLMRAMEFRNR------------------------------------------------- 186 (364)
T ss_dssp HHHHHHTCCTT-CCCTTSCCHHHHHHHTTCH-------------------------------------------------
T ss_pred HHHHHcCCCCc-ccCCCCCCHHHHHHHcCCH-------------------------------------------------
Confidence 99999999987 8999999999999986421
Q ss_pred ccccccCCCCCCCCCChhhHHHHHhhHHHHHHHHHHHHhhhcCchhHHHHHHhhhhHhHHHHHHHHHhhhhhcc-----c
Q 014730 237 TVTSKMHPKESTPFGSTQQITAIFGLMFHKLNRMLWNALMRLAPSIKVIHDQKLTHMRTVEIVRIICEGVVWTN-----F 311 (419)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~-----~ 311 (419)
++++.|++.+. + +
T Consensus 187 ------------------------------------------------------------~~v~~Ll~~g~--~~~~~~~ 204 (364)
T 3ljn_A 187 ------------------------------------------------------------EALDLMMDTVP--SKSSLRL 204 (364)
T ss_dssp ------------------------------------------------------------HHHHHHHHHCS--CSSSCCT
T ss_pred ------------------------------------------------------------HHHHHHHhccc--ccccccc
Confidence 23333344332 2 2
Q ss_pred c--chhhhhHHHHHHHHhChHHHHHHHHHhcCCccccccCCCCchHHHHHhhchHHHHHHHhhcc-cc--------ccee
Q 014730 312 Q--KSAQLSGAMLSAAILGIPEVVNEFIMAYDSCSNWSNQDGHTIFDHAVLHRREKVFNLIQGVN-FT--------TFLF 380 (419)
Q Consensus 312 ~--~~~~~~t~L~~A~~~g~~e~v~~Ll~~~~~d~~~~~~~g~t~Lh~Av~~~~~~iv~~L~~~~-~~--------~~~~ 380 (419)
+ ...+ .||||+|+..|+.++|++|++. |++++..+..|+||||+|+.+++.+++++|++++ .. ....
T Consensus 205 ~~~~~~g-~t~L~~A~~~g~~~~v~~Ll~~-gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 282 (364)
T 3ljn_A 205 DYANKQG-NSHLHWAILINWEDVAMRFVEM-GIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTT 282 (364)
T ss_dssp TCCCTTC-CCTTHHHHTTTCHHHHHHHHTT-TCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHHHHTCTTBSSSS
T ss_pred cccCCCC-CcHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCchhhhcCcccCccc
Confidence 2 2223 8999999999999999999999 9999999999999999999999999999999995 11 1223
Q ss_pred eeccCCCCccchhcccccCCC
Q 014730 381 SSRDKSGNNILHLAGRLVPSS 401 (419)
Q Consensus 381 ~~~D~~G~t~Lh~A~~~~~~~ 401 (419)
...+..|+|||++|+..|...
T Consensus 283 ~~~~~~~~~~l~~aa~~~~~~ 303 (364)
T 3ljn_A 283 VLPDRVVWLDFVPAAADPSKQ 303 (364)
T ss_dssp BCGGGCCCCTTSCSSCCHHHH
T ss_pred ccccccccccchhhhhccCHH
Confidence 347889999999999887644
No 16
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=7.5e-37 Score=283.25 Aligned_cols=259 Identities=17% Similarity=0.211 Sum_probs=208.7
Q ss_pred ccCCChHHHHHHHHhCCccccc--------ccCCCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCC
Q 014730 2 IEKNDWPGVEDFVTNHPDALTA--------KIVEPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGH 73 (419)
Q Consensus 2 ~~~g~~~~v~~ll~~~~~~~~~--------~~~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~ 73 (419)
+..|..+.++.++..... +.. .++..| .||||.|| . .|+.+++++|++.| .+++..|..|.
T Consensus 6 a~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~-~t~l~~A~-~------~g~~~~v~~Ll~~g--~~~~~~~~~g~ 74 (299)
T 1s70_B 6 AKQKRNEQLKRWIGSETD-LEPPVVKRKKTKVKFDD-GAVFLAAC-S------SGDTEEVLRLLERG--ADINYANVDGL 74 (299)
T ss_dssp HHHHHHHHHHHHHHTTTS-SCCSCCCCSCCCCEECH-HHHHHHHH-H------HTCHHHHHHHHHHC--CCTTCBCTTCC
T ss_pred HHHHHHHHHHHHHccccc-cccccccCcccccccCC-ccHHHHHH-H------cCCHHHHHHHHHcC--CCCcccCCCCC
Confidence 455667778888876322 211 113356 79999999 9 99999999999999 89999999999
Q ss_pred hHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHHHcCcH
Q 014730 74 TAVIFCAAKGNLKALKVLLKYNPDLTNIRDSDGYLPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLIAANLY 153 (419)
Q Consensus 74 t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~~~ 153 (419)
||||+||..|+.+++++|+++|++ ++.++..|.||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..++.
T Consensus 75 t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~l~~A~~~~~~ 152 (299)
T 1s70_B 75 TALHQACIDDNVDMVKFLVENGAN-INQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGA-VNSEGDTPLDIAEEEAME 152 (299)
T ss_dssp BHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHCCSHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCC-cCCCCCCHHHHHHhcchH
Confidence 999999999999999999999999 799999999999999999999999999999999999 999999999999999999
Q ss_pred HHHHHHHhhC-CCCCcCCCCCCCcHHHHHHhCCCCCCCCCchhHHHHHHHhhhcccCCCCcccccccccccCCCCCCCCC
Q 014730 154 DVALDLLKLH-PTIGRDNIDSRRIVLNTLSQKPYAFASGSRLGRLRRLIYNCWCQQSCIPLEKERVPSIQSNDDQNVDGD 232 (419)
Q Consensus 154 ~~~~~Ll~~~-~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (419)
+++++++... .++. ..+..+.++
T Consensus 153 ~~~~~ll~~~~~~~~-~~~~~~~~~------------------------------------------------------- 176 (299)
T 1s70_B 153 ELLQNEVNRQGVDIE-AARKEEERI------------------------------------------------------- 176 (299)
T ss_dssp HHHHHHHHHHTCCHH-HHHHHHHHH-------------------------------------------------------
T ss_pred HHHHHHHhhcCCCch-hhhhhhhhH-------------------------------------------------------
Confidence 9999998753 2211 000000000
Q ss_pred CCccccccccCCCCCCCCCChhhHHHHHhhHHHHHHHHHHHHhhhcCchhHHHHHHhhhhHhHHHHHHHHHhhhhhcccc
Q 014730 233 TENFTVTSKMHPKESTPFGSTQQITAIFGLMFHKLNRMLWNALMRLAPSIKVIHDQKLTHMRTVEIVRIICEGVVWTNFQ 312 (419)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~ 312 (419)
.......+..........
T Consensus 177 --------------------------------------------------------------~~~~~~~~l~~~~~~~~~ 194 (299)
T 1s70_B 177 --------------------------------------------------------------MLRDARQWLNSGHINDVR 194 (299)
T ss_dssp --------------------------------------------------------------HHHHHHHHHHHTCCCCCC
T ss_pred --------------------------------------------------------------HHHHHHHHHhccCcchhh
Confidence 001111111221100111
Q ss_pred c-hhhhhHHHHHHHHhChHHHHHHHHHhcCCccccccCCCCchHHHHHhhchHHHHHHHhhcccccceeeeccCCCCccc
Q 014730 313 K-SAQLSGAMLSAAILGIPEVVNEFIMAYDSCSNWSNQDGHTIFDHAVLHRREKVFNLIQGVNFTTFLFSSRDKSGNNIL 391 (419)
Q Consensus 313 ~-~~~~~t~L~~A~~~g~~e~v~~Ll~~~~~d~~~~~~~g~t~Lh~Av~~~~~~iv~~L~~~~~~~~~~~~~D~~G~t~L 391 (419)
. ..+ .||||+|+..|+.++|++|++. |++++..+..|+||||+|+.+++.+++++|+++ +.+++.+|..|+|||
T Consensus 195 ~~~~g-~t~L~~A~~~g~~~~v~~Ll~~-g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~---gad~~~~d~~g~t~l 269 (299)
T 1s70_B 195 HAKSG-GTALHVAAAKGYTEVLKLLIQA-RYDVNIKDYDGWTPLHAAAHWGKEEACRILVEN---LCDMEAVNKVGQTAF 269 (299)
T ss_dssp CTTTC-CCHHHHHHHHTCHHHHHHHHTT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT---TCCTTCCCTTSCCTT
T ss_pred hcCCC-CCHHHHHHHCCcHHHHHHHHHc-CCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHc---CCCCCCcCCCCCCHH
Confidence 1 122 7999999999999999999999 999999999999999999999999999999999 677899999999999
Q ss_pred hhccc
Q 014730 392 HLAGR 396 (419)
Q Consensus 392 h~A~~ 396 (419)
|+|++
T Consensus 270 ~~A~~ 274 (299)
T 1s70_B 270 DVADE 274 (299)
T ss_dssp TSCCS
T ss_pred HHHHH
Confidence 99975
No 17
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=6.2e-36 Score=265.83 Aligned_cols=210 Identities=16% Similarity=0.205 Sum_probs=185.3
Q ss_pred CCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccc-cccCCCCChHHHHHHHcCCHHHHHHHHhcC--CCCCcc-CCC
Q 014730 29 GSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTL-ARQDNHGHTAVIFCAAKGNLKALKVLLKYN--PDLTNI-RDS 104 (419)
Q Consensus 29 g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~-~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~--~~~~~~-~~~ 104 (419)
| .||||.|| . .|+.+++++|++.+ ... +..|..|.||||+|+..|+.+++++|++++ ++ ++. .+.
T Consensus 2 g-~t~L~~A~-~------~g~~~~v~~Ll~~~--~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~-~~~~~~~ 70 (228)
T 2dzn_A 2 S-NYPLHQAC-M------ENEFFKVQELLHSK--PSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVN-LDDYPDD 70 (228)
T ss_dssp --CCHHHHHH-H------TTCHHHHHHHHHHC--GGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCC-GGGCCCT
T ss_pred C-ccHHHHHH-H------hCCHHHHHHHHhcC--ccccccCCCCCCCHHHHHHHcCCHHHHHHHHhcccccc-ccccCCC
Confidence 5 89999999 9 99999999999999 544 458999999999999999999999999999 55 344 788
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhcC--CCCccccCCCCCcHHHHHHHcCcHHHHHHHHhhCCCCCcCCCCCCCcHHHHHH
Q 014730 105 DGYLPVHNAAYYGHKDTFQYLLEAT--NGVDIYRGNDGAMVLLFLIAANLYDVALDLLKLHPTIGRDNIDSRRIVLNTLS 182 (419)
Q Consensus 105 ~g~t~L~~A~~~g~~~~~~~Ll~~g--~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~ 182 (419)
.|.||||+|+..|+.+++++|++.| ++++. .+..|.||||.|+..|+.+++++|++.|+++. .++..|
T Consensus 71 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g-------- 140 (228)
T 2dzn_A 71 SGWTPFHIACSVGNLEVVKSLYDRPLKPDLNK-ITNQGVTCLHLAVGKKWFEVSQFLIENGASVR-IKDKFN-------- 140 (228)
T ss_dssp TSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSC-CCCTTS--------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCCCccccc-CCcCCCCHHHHHHHcCCHhHHHHHHHcCCCcc-ccCCCC--------
Confidence 9999999999999999999999999 77777 88999999999999999999999999988765 232222
Q ss_pred hCCCCCCCCCchhHHHHHHHhhhcccCCCCcccccccccccCCCCCCCCCCCccccccccCCCCCCCCCChhhHHHHHhh
Q 014730 183 QKPYAFASGSRLGRLRRLIYNCWCQQSCIPLEKERVPSIQSNDDQNVDGDTENFTVTSKMHPKESTPFGSTQQITAIFGL 262 (419)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (419)
T Consensus 141 -------------------------------------------------------------------------------- 140 (228)
T 2dzn_A 141 -------------------------------------------------------------------------------- 140 (228)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHhhhcCchhHHHHHHhhhhHhHHHHHHHHHhhhhhccccchhhhhHHHHHHHHhChHHHHHHHHHhcC-
Q 014730 263 MFHKLNRMLWNALMRLAPSIKVIHDQKLTHMRTVEIVRIICEGVVWTNFQKSAQLSGAMLSAAILGIPEVVNEFIMAYD- 341 (419)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~t~L~~A~~~g~~e~v~~Ll~~~~- 341 (419)
.||||+|+..|+.+++++|++. |
T Consensus 141 -------------------------------------------------------~t~L~~A~~~~~~~~v~~Ll~~-g~ 164 (228)
T 2dzn_A 141 -------------------------------------------------------QIPLHRAASVGSLKLIELLCGL-GK 164 (228)
T ss_dssp -------------------------------------------------------CCHHHHHHHTTCHHHHHHHHTT-TC
T ss_pred -------------------------------------------------------CCHHHHHHHcCCHHHHHHHHhc-Cc
Confidence 5677888888889999999999 7
Q ss_pred CccccccCCCCchHHHHHhhchHHHHHHHh-hcccccceeeeccCCCCccchhccccc
Q 014730 342 SCSNWSNQDGHTIFDHAVLHRREKVFNLIQ-GVNFTTFLFSSRDKSGNNILHLAGRLV 398 (419)
Q Consensus 342 ~d~~~~~~~g~t~Lh~Av~~~~~~iv~~L~-~~~~~~~~~~~~D~~G~t~Lh~A~~~~ 398 (419)
++++.++..|+||||+|+..++.+++++|+ +. +.+++.+|.+|.||||+|++.+
T Consensus 165 ~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~---ga~~~~~~~~g~t~l~~A~~~~ 219 (228)
T 2dzn_A 165 SAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKY---GAEYDLVDNKGAKAEDVALNEQ 219 (228)
T ss_dssp CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHH---CCCSCCBCTTSCBGGGGCSSTT
T ss_pred ccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhc---CCCCCccCCCCCcHHHHHHHHH
Confidence 899999999999999999999999999999 55 6788999999999999998653
No 18
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.4e-37 Score=279.66 Aligned_cols=148 Identities=18% Similarity=0.126 Sum_probs=104.3
Q ss_pred CCCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCC------ccccccCCCCChHHHHHHHcCCHH-HHHHHHhcCCCC
Q 014730 26 VEPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDP------QTLARQDNHGHTAVIFCAAKGNLK-ALKVLLKYNPDL 98 (419)
Q Consensus 26 ~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~------~~~~~~~~~g~t~L~~A~~~g~~~-~~~~Ll~~~~~~ 98 (419)
|..+ .+||+.|| . .|+.++|++|++.|.. ..++..+..|.|||+.|+..+..+ ++++|++.|++
T Consensus 8 d~~~-~~~L~~A~-~------~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gad- 78 (269)
T 4b93_B 8 DYRE-VEKLLRAV-A------DGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLG- 78 (269)
T ss_dssp CCHH-HHHHHHHH-H------TTCHHHHHHHHTCC----------------------------------------CCCC-
T ss_pred Cccc-hhHHHHHH-H------cCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCC-
Confidence 6677 89999999 9 9999999999998821 125667888999999999887764 78999999999
Q ss_pred CccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhhCCCCCcCCCCCCCcHH
Q 014730 99 TNIRDSDGYLPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLIAANLYDVALDLLKLHPTIGRDNIDSRRIVL 178 (419)
Q Consensus 99 ~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l 178 (419)
++.+|.+|.||||+|+..|+.+++++|++.|++++. .+..|.||++.|+..++.+++++|++.|+++. .+|..|.|||
T Consensus 79 vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~-~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n-~~d~~g~TpL 156 (269)
T 4b93_B 79 VNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGA-RNADQAVPLHLACQQGHFQVVKCLLDSNAKPN-KKDLSGNTPL 156 (269)
T ss_dssp TTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTC-CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSC-CCCTTCCCHH
T ss_pred CCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCc-cCCCCCCccccccccChHHHHHHHHHCCCCCC-CCCCCCCCHH
Confidence 899999999999999999999999999999999999 99999999999999999999999999998876 5666666665
Q ss_pred HHHHhC
Q 014730 179 NTLSQK 184 (419)
Q Consensus 179 ~~a~~~ 184 (419)
|+|+..
T Consensus 157 ~~A~~~ 162 (269)
T 4b93_B 157 IYACSG 162 (269)
T ss_dssp HHHHHT
T ss_pred HHHHHC
Confidence 555554
No 19
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=3.6e-36 Score=268.01 Aligned_cols=221 Identities=16% Similarity=0.139 Sum_probs=180.1
Q ss_pred CCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCc
Q 014730 28 PGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCAAKGNLKALKVLLKYNPDLTNIRDSDGY 107 (419)
Q Consensus 28 ~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~ 107 (419)
.+ .+|||.|+ . .|+.+.++.|++.+ +..++..|..|.||||+|+..|+.+++++|+++|++ ++.++..|.
T Consensus 5 ~~-~~~l~~A~-~------~g~~~~v~~ll~~~-~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~ 74 (231)
T 3aji_A 5 VS-NIMICNLA-Y------SGKLDELKERILAD-KSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVP-VNDKDDAGW 74 (231)
T ss_dssp CS-SSHHHHHH-H------HTCHHHHHHHHHHC-GGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-SCCCCTTSC
T ss_pred cc-cchHHHHH-H------hCCHHHHHHHHHhc-hhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCC-CCCcCCCCC
Confidence 45 78888888 8 88888888888887 345677788888888888888888888888888888 688888888
Q ss_pred hHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhhCCCCCcCCCCCCCcHHHHHHhCCCC
Q 014730 108 LPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLIAANLYDVALDLLKLHPTIGRDNIDSRRIVLNTLSQKPYA 187 (419)
Q Consensus 108 t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~~~ 187 (419)
||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..++.+++++|++.|+++. .++..|.||||+|+..+.
T Consensus 75 t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~- 151 (231)
T 3aji_A 75 SPLHIAASAGXDEIVKALLVKGAHVNA-VNQNGCTPLHYAASKNRHEIAVMLLEGGANPD-AKDHYDATAMHRAAAKGN- 151 (231)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHHTC-
T ss_pred CHHHHHHHcCHHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCcHHHHHHHcCC-
Confidence 888888888888888888888888888 88888888888888888888888888888876 778888888888876531
Q ss_pred CCCCCchhHHHHHHHhhhcccCCCCcccccccccccCCCCCCCCCCCccccccccCCCCCCCCCChhhHHHHHhhHHHHH
Q 014730 188 FASGSRLGRLRRLIYNCWCQQSCIPLEKERVPSIQSNDDQNVDGDTENFTVTSKMHPKESTPFGSTQQITAIFGLMFHKL 267 (419)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (419)
T Consensus 152 -------------------------------------------------------------------------------- 151 (231)
T 3aji_A 152 -------------------------------------------------------------------------------- 151 (231)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhhhcCchhHHHHHHhhhhHhHHHHHHHHHhhhhhccccch--hhhhHHHHHHHHhChHHHHHHHHHhcCCccc
Q 014730 268 NRMLWNALMRLAPSIKVIHDQKLTHMRTVEIVRIICEGVVWTNFQKS--AQLSGAMLSAAILGIPEVVNEFIMAYDSCSN 345 (419)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~--~~~~t~L~~A~~~g~~e~v~~Ll~~~~~d~~ 345 (419)
.++++.+++.+. +++.. .+ .||||+|+..|+.+++++|++. |++++
T Consensus 152 ----------------------------~~~v~~Ll~~g~--~~~~~~~~g-~t~L~~A~~~~~~~~v~~Ll~~-ga~~~ 199 (231)
T 3aji_A 152 ----------------------------LKMVHILLFYKA--STNIQDTEG-NTPLHLACDEERVEEAKFLVTQ-GASIY 199 (231)
T ss_dssp ----------------------------HHHHHHHHHTTC--CSCCCCTTS-CCHHHHHHHTTCHHHHHHHHHT-TCCSC
T ss_pred ----------------------------HHHHHHHHhcCC--CccccCCCC-CCHHHHHHHCCCHHHHHHHHHC-CCCCC
Confidence 122333333333 22222 22 7899999999999999999999 99999
Q ss_pred cccCCCCchHHHHHhhchHHHHHHHhhc
Q 014730 346 WSNQDGHTIFDHAVLHRREKVFNLIQGV 373 (419)
Q Consensus 346 ~~~~~g~t~Lh~Av~~~~~~iv~~L~~~ 373 (419)
.++..|+||||+|+..++.+++++|.++
T Consensus 200 ~~~~~g~t~l~~A~~~~~~~i~~lL~~~ 227 (231)
T 3aji_A 200 IENKEEKTPLQVAKGGLGLILKRLAEGE 227 (231)
T ss_dssp CCCTTSCCHHHHSCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHhhHHHHHHHHHccc
Confidence 9999999999999999999999999887
No 20
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=4e-36 Score=283.41 Aligned_cols=250 Identities=15% Similarity=0.135 Sum_probs=213.8
Q ss_pred CCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCC-CCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCC
Q 014730 27 EPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDN-HGHTAVIFCAAKGNLKALKVLLKYNPDLTNIRDSD 105 (419)
Q Consensus 27 ~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~-~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~ 105 (419)
.+| .||||.|+ . .|++++|++|+++| +++|.++. .|.||||+||..|+.+++++|+++|++ ++.++..
T Consensus 23 ~~~-~t~L~~Av-~------~g~~~~V~~LL~~G--advn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~-~~~~~~~ 91 (337)
T 4g8k_A 23 VED-NHLLIKAV-Q------NEDVDLVQQLLEGG--ANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGAD-PVLRKKN 91 (337)
T ss_dssp HHH-HHHHHHHH-H------TTCHHHHHHHHHHT--CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTT
T ss_pred CCC-ChHHHHHH-H------cCCHHHHHHHHHCC--CCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCc-hhhhccC
Confidence 357 89999999 9 99999999999999 99998876 599999999999999999999999999 7999999
Q ss_pred CchHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhhCCCCCc---------CCCCCCCc
Q 014730 106 GYLPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLIAANLYDVALDLLKLHPTIGR---------DNIDSRRI 176 (419)
Q Consensus 106 g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~---------~~~~~g~~ 176 (419)
+.+|++.++..+...++..+++.+++++. .+..|.||+|+|+..|+.+++++|++.|+++.. ..+..|.|
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T 170 (337)
T 4g8k_A 92 GATPFILAAIAGSVKLLKLFLSKGADVNE-CDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGAT 170 (337)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHTTTCCTTC-BCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCC
T ss_pred CCchhHHHHhcccchhhHHhhhccchhhh-hccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCc
Confidence 99999999999999999999999999999 999999999999999999999999999987641 23456889
Q ss_pred HHHHHHhCCCCCCCCCchhHHHHHHHhhhcccCCCCcccccccccccCCCCCCCCCCCccccccccCCCCCCCCCChhhH
Q 014730 177 VLNTLSQKPYAFASGSRLGRLRRLIYNCWCQQSCIPLEKERVPSIQSNDDQNVDGDTENFTVTSKMHPKESTPFGSTQQI 256 (419)
Q Consensus 177 ~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (419)
|||+|+..+.
T Consensus 171 ~L~~A~~~g~---------------------------------------------------------------------- 180 (337)
T 4g8k_A 171 ALMDAAEKGH---------------------------------------------------------------------- 180 (337)
T ss_dssp HHHHHHHHTC----------------------------------------------------------------------
T ss_pred HHHHHHHCCC----------------------------------------------------------------------
Confidence 9999887532
Q ss_pred HHHHhhHHHHHHHHHHHHhhhcCchhHHHHHHhhhhHhHHHHHHHHHhh-hhhccccchhhh-hHHHHHHHHhCh----H
Q 014730 257 TAIFGLMFHKLNRMLWNALMRLAPSIKVIHDQKLTHMRTVEIVRIICEG-VVWTNFQKSAQL-SGAMLSAAILGI----P 330 (419)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~~~~~~~~~-~t~L~~A~~~g~----~ 330 (419)
.++++.|++. +. +++..+.. .|+++.++..+. .
T Consensus 181 ---------------------------------------~~~v~~LL~~~ga--d~n~~d~~g~t~l~~~~~~~~~~~~~ 219 (337)
T 4g8k_A 181 ---------------------------------------VEVLKILLDEMGA--DVNACDNMGRNALIHALLSSDDSDVE 219 (337)
T ss_dssp ---------------------------------------HHHHHHHHHHSCC--CTTCCCTTSCCHHHHHHHHSCTTTHH
T ss_pred ---------------------------------------HHHHHHHHhccCC--CcCccCCCCCcHHHHHHHHcCcccHH
Confidence 1233333332 22 33222211 788887776543 4
Q ss_pred HHHHHHHHhcCCccccccCCCCchHHHHHhhchHHHHHHHhhcccccceeeeccCCCCccchhcccccCCCC
Q 014730 331 EVVNEFIMAYDSCSNWSNQDGHTIFDHAVLHRREKVFNLIQGVNFTTFLFSSRDKSGNNILHLAGRLVPSSE 402 (419)
Q Consensus 331 e~v~~Ll~~~~~d~~~~~~~g~t~Lh~Av~~~~~~iv~~L~~~~~~~~~~~~~D~~G~t~Lh~A~~~~~~~~ 402 (419)
+++++|++. |++++.++..|+||||+|+..++.+++++|++. .+.+++.+|.+|+||||+||+.|+.++
T Consensus 220 ~i~~lLl~~-gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~--~~~~vn~~d~~G~TpL~~A~~~g~~~i 288 (337)
T 4g8k_A 220 AITHLLLDH-GADVNVRGERGKTPLILAVEKKHLGLVQRLLEQ--EHIEINDTDSDGKTALLLAVELKLKKI 288 (337)
T ss_dssp HHHHHHHHT-TCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTS--TTCCTTCBCTTSCBHHHHHHHTTCHHH
T ss_pred HHHHHHHHC-CCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHh--cCCcccCcCCCCCCHHHHHHHcCCHHH
Confidence 688999999 999999999999999999999999999999998 677899999999999999999998763
No 21
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=7.7e-37 Score=276.46 Aligned_cols=221 Identities=15% Similarity=0.113 Sum_probs=160.2
Q ss_pred cccccCCCCChHHHHHHHcC-------------CHHHHHHHHhcCCCCCccCCCCCchHHHHHHHcCCHHHHHHHHhcCC
Q 014730 64 TLARQDNHGHTAVIFCAAKG-------------NLKALKVLLKYNPDLTNIRDSDGYLPVHNAAYYGHKDTFQYLLEATN 130 (419)
Q Consensus 64 ~~~~~~~~g~t~L~~A~~~g-------------~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~ 130 (419)
++|.+|..|.||||+|+..| +.+++++|++.|+++.+..+..|.||||+|+..|+.+++++|++.|+
T Consensus 2 dvn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~ 81 (253)
T 1yyh_A 2 DVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASA 81 (253)
T ss_dssp --------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CCCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Confidence 57889999999999999977 89999999999999556668999999999999999999999999999
Q ss_pred CCccccCCCCCcHHHHHHHcCcHHHHHHHHhhCCCCCcCCCCCCCcHHHHHHhCCCCCCCCCchhHHHHHHHhhhcccCC
Q 014730 131 GVDIYRGNDGAMVLLFLIAANLYDVALDLLKLHPTIGRDNIDSRRIVLNTLSQKPYAFASGSRLGRLRRLIYNCWCQQSC 210 (419)
Q Consensus 131 ~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (419)
+++. .+..|.||||+|+..|+.+++++|++.++......+..|.||||+|+..+..
T Consensus 82 ~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~----------------------- 137 (253)
T 1yyh_A 82 DANI-QDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVE----------------------- 137 (253)
T ss_dssp CTTC-CCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCS-----------------------
T ss_pred CCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChH-----------------------
Confidence 9999 9999999999999999999999999998733338899999999999886421
Q ss_pred CCcccccccccccCCCCCCCCCCCccccccccCCCCCCCCCChhhHHHHHhhHHHHHHHHHHHHhhhcCchhHHHHHHhh
Q 014730 211 IPLEKERVPSIQSNDDQNVDGDTENFTVTSKMHPKESTPFGSTQQITAIFGLMFHKLNRMLWNALMRLAPSIKVIHDQKL 290 (419)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (419)
T Consensus 138 -------------------------------------------------------------------------------- 137 (253)
T 1yyh_A 138 -------------------------------------------------------------------------------- 137 (253)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhHhHHHHHHHHHhhhhhccccch--hhhhHHHHHHHHhChHHHHHHHHHhcCCccccccCCCCchHHHHHhhchHHHHH
Q 014730 291 THMRTVEIVRIICEGVVWTNFQKS--AQLSGAMLSAAILGIPEVVNEFIMAYDSCSNWSNQDGHTIFDHAVLHRREKVFN 368 (419)
Q Consensus 291 ~~~~~~~~l~~l~~~~~~~~~~~~--~~~~t~L~~A~~~g~~e~v~~Ll~~~~~d~~~~~~~g~t~Lh~Av~~~~~~iv~ 368 (419)
++++.+++.+. +++.. .+ .||||+|+..|+.++|++|++. |++++..+..|+||||+|+.+++.++++
T Consensus 138 ------~~v~~Ll~~g~--~~~~~d~~g-~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~tpL~~A~~~~~~~~v~ 207 (253)
T 1yyh_A 138 ------GMLEDLINSHA--DVNAVDDLG-KSALHWAAAVNNVDAAVVLLKN-GANKDMQNNREETPLFLAAREGSYETAK 207 (253)
T ss_dssp ------SHHHHHHHTTC--CTTCBCTTS-CBHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred ------HHHHHHHHcCC--CCCCcCCCC-CCHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHH
Confidence 12222333332 33222 22 8999999999999999999999 9999999999999999999999999999
Q ss_pred HHhhcccccceeeeccCCCCccchhcccccCCC
Q 014730 369 LIQGVNFTTFLFSSRDKSGNNILHLAGRLVPSS 401 (419)
Q Consensus 369 ~L~~~~~~~~~~~~~D~~G~t~Lh~A~~~~~~~ 401 (419)
+|+++ +.+++.+|..|+||||+|++.|+.+
T Consensus 208 ~Ll~~---ga~~~~~d~~g~tpl~~A~~~g~~~ 237 (253)
T 1yyh_A 208 VLLDH---FANRDITDHMDRLPRDIAQERMHHD 237 (253)
T ss_dssp HHHHT---TCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred HHHHc---CCCccccccCCCCHHHHHHHcCCHH
Confidence 99999 5678899999999999999999866
No 22
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=8.2e-36 Score=265.66 Aligned_cols=215 Identities=19% Similarity=0.173 Sum_probs=188.7
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHH
Q 014730 69 DNHGHTAVIFCAAKGNLKALKVLLKYNPDLTNIRDSDGYLPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLI 148 (419)
Q Consensus 69 ~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~ 148 (419)
+..+.+|||.|+..|+.+.++.|++.++..++.++..|.||||+|+..|+.+++++|++.|++++. .+..|.||||+|+
T Consensus 3 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~ 81 (231)
T 3aji_A 3 GCVSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVND-KDDAGWSPLHIAA 81 (231)
T ss_dssp CCCSSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCC-CCTTSCCHHHHHH
T ss_pred CccccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCC-cCCCCCCHHHHHH
Confidence 456889999999999999999999998776788899999999999999999999999999999999 9999999999999
Q ss_pred HcCcHHHHHHHHhhCCCCCcCCCCCCCcHHHHHHhCCCCCCCCCchhHHHHHHHhhhcccCCCCcccccccccccCCCCC
Q 014730 149 AANLYDVALDLLKLHPTIGRDNIDSRRIVLNTLSQKPYAFASGSRLGRLRRLIYNCWCQQSCIPLEKERVPSIQSNDDQN 228 (419)
Q Consensus 149 ~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (419)
..|+.+++++|++.|+++. ..+..|.||||+|+..+..
T Consensus 82 ~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~----------------------------------------- 119 (231)
T 3aji_A 82 SAGXDEIVKALLVKGAHVN-AVNQNGCTPLHYAASKNRH----------------------------------------- 119 (231)
T ss_dssp HHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCH-----------------------------------------
T ss_pred HcCHHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHcCCH-----------------------------------------
Confidence 9999999999999999987 8899999999999986421
Q ss_pred CCCCCCccccccccCCCCCCCCCChhhHHHHHhhHHHHHHHHHHHHhhhcCchhHHHHHHhhhhHhHHHHHHHHHhhhhh
Q 014730 229 VDGDTENFTVTSKMHPKESTPFGSTQQITAIFGLMFHKLNRMLWNALMRLAPSIKVIHDQKLTHMRTVEIVRIICEGVVW 308 (419)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~ 308 (419)
++++.+++.+.
T Consensus 120 --------------------------------------------------------------------~~~~~Ll~~g~- 130 (231)
T 3aji_A 120 --------------------------------------------------------------------EIAVMLLEGGA- 130 (231)
T ss_dssp --------------------------------------------------------------------HHHHHHHHTTC-
T ss_pred --------------------------------------------------------------------HHHHHHHHcCC-
Confidence 23333344433
Q ss_pred ccccchhhh-hHHHHHHHHhChHHHHHHHHHhcCCccccccCCCCchHHHHHhhchHHHHHHHhhcccccceeeeccCCC
Q 014730 309 TNFQKSAQL-SGAMLSAAILGIPEVVNEFIMAYDSCSNWSNQDGHTIFDHAVLHRREKVFNLIQGVNFTTFLFSSRDKSG 387 (419)
Q Consensus 309 ~~~~~~~~~-~t~L~~A~~~g~~e~v~~Ll~~~~~d~~~~~~~g~t~Lh~Av~~~~~~iv~~L~~~~~~~~~~~~~D~~G 387 (419)
+++..+.. .||||.|+..|+.+++++|++. +++++.++..|+||||+|+.+++.+++++|+++ +.+++.+|..|
T Consensus 131 -~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---ga~~~~~~~~g 205 (231)
T 3aji_A 131 -NPDAKDHYDATAMHRAAAKGNLKMVHILLFY-KASTNIQDTEGNTPLHLACDEERVEEAKFLVTQ---GASIYIENKEE 205 (231)
T ss_dssp -CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHT---TCCSCCCCTTS
T ss_pred -CCCCcCCCCCcHHHHHHHcCCHHHHHHHHhc-CCCccccCCCCCCHHHHHHHCCCHHHHHHHHHC---CCCCCCCCCCC
Confidence 32222111 8999999999999999999999 999999999999999999999999999999999 66788999999
Q ss_pred CccchhcccccCC
Q 014730 388 NNILHLAGRLVPS 400 (419)
Q Consensus 388 ~t~Lh~A~~~~~~ 400 (419)
.||||+|++.+..
T Consensus 206 ~t~l~~A~~~~~~ 218 (231)
T 3aji_A 206 KTPLQVAKGGLGL 218 (231)
T ss_dssp CCHHHHSCHHHHH
T ss_pred CCHHHHHHhhHHH
Confidence 9999999976653
No 23
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=9.4e-37 Score=291.67 Aligned_cols=238 Identities=16% Similarity=0.175 Sum_probs=204.7
Q ss_pred HHHHHHHHhCCcccccccC-CCCCccHHHHHHHhhcccCCCchHHHHHHHH--------hhCCCccccccCCCCChHHHH
Q 014730 8 PGVEDFVTNHPDALTAKIV-EPGSKTIFHTIAELLVDDDSDEATCLLDKLA--------TKVDPQTLARQDNHGHTAVIF 78 (419)
Q Consensus 8 ~~v~~ll~~~~~~~~~~~~-~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll--------~~~~~~~~~~~~~~g~t~L~~ 78 (419)
++++.|+. .++|.+ + ..| .||||+|| . .|+.+++++|+ +.| ++++.+|..|.||||+
T Consensus 107 ~~~~~L~~---~~~n~~-d~~~g-~t~Lh~Aa-~------~g~~~~v~~Ll~~~~~~ll~~g--a~vn~~d~~g~TpL~~ 172 (373)
T 2fo1_E 107 AITEPITR---ESVNII-DPRHN-RTVLHWIA-S------NSSAEKSEDLIVHEAKECIAAG--ADVNAMDCDENTPLML 172 (373)
T ss_dssp CCCSCCST---TTTTTC-CCSSC-CCHHHHHH-C------TTCCSCCTTHHHHHHHHHHHTC--CCTTCCCTTSCCHHHH
T ss_pred hHHHHhcc---cccccc-CCcCC-CCHHHHHH-H------CCCHHHHHHHHHHHHHHHHhcC--CCCcCCCCCCCCHHHH
Confidence 44444443 356777 6 688 99999999 9 99988777776 788 9999999999999999
Q ss_pred HHHcCCHHHHHHHHhcCCCCCccCCCCCchHHHHHHHcCCHHHHHHHHhcC---CCCccccCCCCCcHHHHHHHcC---c
Q 014730 79 CAAKGNLKALKVLLKYNPDLTNIRDSDGYLPVHNAAYYGHKDTFQYLLEAT---NGVDIYRGNDGAMVLLFLIAAN---L 152 (419)
Q Consensus 79 A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g---~~~~~~~~~~g~t~l~~a~~~~---~ 152 (419)
|+..|+.+++++|+++|++ ++.++..|.||||+|+..|+.+++++|++.| ++++. .+..|.||||+|+..+ +
T Consensus 173 A~~~g~~~iv~~Ll~~ga~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~-~d~~g~t~L~~A~~~~~~~~ 250 (373)
T 2fo1_E 173 AVLARRRRLVAYLMKAGAD-PTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEE-LDRNGMTALMIVAHNEGRDQ 250 (373)
T ss_dssp HHHHTCHHHHHHHHHTTCC-SCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSC-CCTTSCCHHHHHHHSCSTTH
T ss_pred HHHcChHHHHHHHHHCCCC-CcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhh-cCCCCCCHHHHHHHhCCcch
Confidence 9999999999999999999 7999999999999999999999999999998 78888 9999999999999998 8
Q ss_pred HHHHHHHHhhCCCCCc-------CCCCCCCcHHHHHHhCCCCCCCCCchhHHHHHHHhhhcccCCCCcccccccccccCC
Q 014730 153 YDVALDLLKLHPTIGR-------DNIDSRRIVLNTLSQKPYAFASGSRLGRLRRLIYNCWCQQSCIPLEKERVPSIQSND 225 (419)
Q Consensus 153 ~~~~~~Ll~~~~~~~~-------~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (419)
.+++++|++.|+++.. ..|..|.||||+|+..+.
T Consensus 251 ~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~--------------------------------------- 291 (373)
T 2fo1_E 251 VASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSN--------------------------------------- 291 (373)
T ss_dssp HHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCC---------------------------------------
T ss_pred HHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCC---------------------------------------
Confidence 9999999999988762 257789999999998642
Q ss_pred CCCCCCCCCccccccccCCCCCCCCCChhhHHHHHhhHHHHHHHHHHHHhhhcCchhHHHHHHhhhhHhHHHHHHHHHhh
Q 014730 226 DQNVDGDTENFTVTSKMHPKESTPFGSTQQITAIFGLMFHKLNRMLWNALMRLAPSIKVIHDQKLTHMRTVEIVRIICEG 305 (419)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 305 (419)
.++++.|++.
T Consensus 292 ----------------------------------------------------------------------~~~v~~Ll~~ 301 (373)
T 2fo1_E 292 ----------------------------------------------------------------------MPIVKYLVGE 301 (373)
T ss_dssp ----------------------------------------------------------------------HHHHHHHHHH
T ss_pred ----------------------------------------------------------------------HHHHHHHHHh
Confidence 1333333433
Q ss_pred h-hhcccc--chhhhhHHHHHHHHhChHHHHHHHHHhcCCccccccCCCCchHHHHHhhchHHHHHHHhhcc
Q 014730 306 V-VWTNFQ--KSAQLSGAMLSAAILGIPEVVNEFIMAYDSCSNWSNQDGHTIFDHAVLHRREKVFNLIQGVN 374 (419)
Q Consensus 306 ~-~~~~~~--~~~~~~t~L~~A~~~g~~e~v~~Ll~~~~~d~~~~~~~g~t~Lh~Av~~~~~~iv~~L~~~~ 374 (419)
. . +++ ...+ .||||+|+..|+.++|++|++. |++++.++..|+||||+|+.+++.+++++|++++
T Consensus 302 ~~~--~~n~~d~~g-~TpL~~A~~~g~~~iv~~Ll~~-gad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~ 369 (373)
T 2fo1_E 302 KGS--NKDKQDEDG-KTPIMLAAQEGRIEVVMYLIQQ-GASVEAVDATDHTARQLAQANNHHNIVDIFDRCR 369 (373)
T ss_dssp SCC--CTTCCCTTC-CCHHHHHHHHTCHHHHHHHHHT-TCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC
T ss_pred cCC--CccCcCCCC-CCHHHHHHHcCCHHHHHHHHHc-CCCccCCCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence 2 2 222 2223 8999999999999999999999 9999999999999999999999999999999984
No 24
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=1.9e-35 Score=268.55 Aligned_cols=209 Identities=15% Similarity=0.116 Sum_probs=183.0
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHHHc
Q 014730 71 HGHTAVIFCAAKGNLKALKVLLKYNPDLTNIRDSDGYLPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLIAA 150 (419)
Q Consensus 71 ~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~ 150 (419)
+|+||||+|+..|+.+++++|+++|++ ++.++..|.||||+|+..|+.+++++|++.|++++. .+..|.||||+|+..
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~ 79 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWA-VNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNG-VTADWHTPLFNACVS 79 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHc
Confidence 589999999999999999999999999 899999999999999999999999999999999999 999999999999999
Q ss_pred CcHHHHHHHHhhCCCCCcCCCCCCCcHHHHHHhCCCCCCCCCchhHHHHHHHhhhcccCCCCcccccccccccCCCCCCC
Q 014730 151 NLYDVALDLLKLHPTIGRDNIDSRRIVLNTLSQKPYAFASGSRLGRLRRLIYNCWCQQSCIPLEKERVPSIQSNDDQNVD 230 (419)
Q Consensus 151 ~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (419)
|+.+++++|++.|+++. .+..|.||||+|+..+.
T Consensus 80 ~~~~~v~~Ll~~g~~~~--~~~~g~t~L~~A~~~~~-------------------------------------------- 113 (261)
T 2xai_A 80 GSWDCVNLLLQHGASVQ--PESDLASPIHEAARRGH-------------------------------------------- 113 (261)
T ss_dssp TCHHHHHHHHHTTCCSS--CSCTTCCHHHHHHHTTC--------------------------------------------
T ss_pred CCHHHHHHHHHCCCCCC--CCCCCCCHHHHHHHcCc--------------------------------------------
Confidence 99999999999999876 45669999999998642
Q ss_pred CCCCccccccccCCCCCCCCCChhhHHHHHhhHHHHHHHHHHHHhhhcCchhHHHHHHhhhhHhHHHHHHHHHhhhhhcc
Q 014730 231 GDTENFTVTSKMHPKESTPFGSTQQITAIFGLMFHKLNRMLWNALMRLAPSIKVIHDQKLTHMRTVEIVRIICEGVVWTN 310 (419)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ 310 (419)
.++++.+++.+. +
T Consensus 114 -----------------------------------------------------------------~~~v~~Ll~~g~--~ 126 (261)
T 2xai_A 114 -----------------------------------------------------------------VECVNSLIAYGG--N 126 (261)
T ss_dssp -----------------------------------------------------------------HHHHHHHHHTTC--C
T ss_pred -----------------------------------------------------------------HHHHHHHHHcCC--C
Confidence 133334444443 3
Q ss_pred ccchhhh-hHHHHHHHHhChHHHHHHHHHhcCCccccccCCCCchHHHHHhhchHHHHHHHhhcccccceeeeccCCCCc
Q 014730 311 FQKSAQL-SGAMLSAAILGIPEVVNEFIMAYDSCSNWSNQDGHTIFDHAVLHRREKVFNLIQGVNFTTFLFSSRDKSGNN 389 (419)
Q Consensus 311 ~~~~~~~-~t~L~~A~~~g~~e~v~~Ll~~~~~d~~~~~~~g~t~Lh~Av~~~~~~iv~~L~~~~~~~~~~~~~D~~G~t 389 (419)
++..+.. .||||.|+..|+.+++++|++. |++++. +..|+||||+|+.+++.+++++|++. +.+++.+|.+|+|
T Consensus 127 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~---gad~~~~d~~g~t 201 (261)
T 2xai_A 127 IDHKISHLGTPLYLACENQQRACVKKLLES-GADVNQ-GKGQDSPLHAVARTASEELACLLMDF---GADTQAKNAEGKR 201 (261)
T ss_dssp TTCCBTTTBCHHHHHHHTTCHHHHHHHHHH-TCCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHT---TCCTTCCCTTSCC
T ss_pred CCcCCCCCCCHHHHHHHhCCHHHHHHHHHc-CCCCCC-CCCCCChHHHHHHcCCHHHHHHHHHc---CCCCCCcCCCCCC
Confidence 3322211 7999999999999999999999 999995 78999999999999999999999999 6778999999999
Q ss_pred cchhcccccC
Q 014730 390 ILHLAGRLVP 399 (419)
Q Consensus 390 ~Lh~A~~~~~ 399 (419)
|||+|++.++
T Consensus 202 pl~~A~~~~~ 211 (261)
T 2xai_A 202 PVELVPPESP 211 (261)
T ss_dssp GGGGSCTTCT
T ss_pred hhhhcccccc
Confidence 9999996554
No 25
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=6.1e-35 Score=261.03 Aligned_cols=225 Identities=12% Similarity=0.072 Sum_probs=197.8
Q ss_pred CCCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCC
Q 014730 26 VEPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCAAKGNLKALKVLLKYNPDLTNIRDSD 105 (419)
Q Consensus 26 ~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~ 105 (419)
|..| .||||.|+ . .|+.+++++|++.| .+++..+..|.||||+|+..|+.+++++|+++++++....+..
T Consensus 6 d~~~-~~~l~~A~-~------~g~~~~~~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~ 75 (240)
T 3eu9_A 6 DDYS-TWDIVKAT-Q------YGIYERCRELVEAG--YDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDL 75 (240)
T ss_dssp SCGG-GCCHHHHH-H------TTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTT
T ss_pred cccc-chHHHHHH-H------cCChHHHHHHHHcC--CCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCc
Confidence 8889 99999999 9 99999999999999 8999999999999999999999999999999999854455566
Q ss_pred CchHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhhCCCCCcCCCCCCCcHHHHHHhCC
Q 014730 106 GYLPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLIAANLYDVALDLLKLHPTIGRDNIDSRRIVLNTLSQKP 185 (419)
Q Consensus 106 g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~ 185 (419)
|.||||+|+..|+.+++++|++.|++++. .+..|.||||.|+..|+.+++++|++.|+++. ..+..|.||||+|+..+
T Consensus 76 ~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~-~~~~~g~t~l~~a~~~~ 153 (240)
T 3eu9_A 76 NSTPLHWATRQGHLSMVVQLMKYGADPSL-IDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVD-MMDQNGMTPLMWAAYRT 153 (240)
T ss_dssp TBCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHHC
T ss_pred CCChhHHHHHcCCHHHHHHHHHcCCCCcc-cCCCCCCHHHHHHHcCHHHHHHHHHhcCCCcc-ccCCCCCcHHHHHHHhC
Confidence 99999999999999999999999999999 99999999999999999999999999999987 88999999999998643
Q ss_pred CCCCCCCchhHHHHHHHhhhcccCCCCcccccccccccCCCCCCCCCCCccccccccCCCCCCCCCChhhHHHHHhhHHH
Q 014730 186 YAFASGSRLGRLRRLIYNCWCQQSCIPLEKERVPSIQSNDDQNVDGDTENFTVTSKMHPKESTPFGSTQQITAIFGLMFH 265 (419)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (419)
....
T Consensus 154 ~~~~---------------------------------------------------------------------------- 157 (240)
T 3eu9_A 154 HSVD---------------------------------------------------------------------------- 157 (240)
T ss_dssp CSST----------------------------------------------------------------------------
T ss_pred ChHH----------------------------------------------------------------------------
Confidence 2110
Q ss_pred HHHHHHHHHhhhcCchhHHHHHHhhhhHhHHHHHHHHHhhhhhccccch---hhhhHHHHHHHHhChHHHHHHHHHhcCC
Q 014730 266 KLNRMLWNALMRLAPSIKVIHDQKLTHMRTVEIVRIICEGVVWTNFQKS---AQLSGAMLSAAILGIPEVVNEFIMAYDS 342 (419)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~---~~~~t~L~~A~~~g~~e~v~~Ll~~~~~ 342 (419)
+++.+.+... +++.. .+ .||||.|+..|+.+++++|++. |+
T Consensus 158 --------------------------------~~~~L~~~~~--~~~~~~~~~g-~t~L~~A~~~~~~~~v~~Ll~~-g~ 201 (240)
T 3eu9_A 158 --------------------------------PTRLLLTFNV--SVNLGDKYHK-NTALHWAVLAGNTTVISLLLEA-GA 201 (240)
T ss_dssp --------------------------------THHHHHHTTC--CTTCCCTTTC-CCHHHHHHHHTCHHHHHHHHHH-TC
T ss_pred --------------------------------HHHHHHhcCC--CcchhhccCC-CcHHHHHHHcCCHHHHHHHHHc-CC
Confidence 1111122222 22221 22 7999999999999999999999 99
Q ss_pred ccccccCCCCchHHHHHhhchHHHHHHHhhcc
Q 014730 343 CSNWSNQDGHTIFDHAVLHRREKVFNLIQGVN 374 (419)
Q Consensus 343 d~~~~~~~g~t~Lh~Av~~~~~~iv~~L~~~~ 374 (419)
+++..+..|+||||+|+++++.+++++|++.+
T Consensus 202 ~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~ 233 (240)
T 3eu9_A 202 NVDAQNIKGESALDLAKQRKNVWMINHLQEAR 233 (240)
T ss_dssp CTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC
T ss_pred CCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhh
Confidence 99999999999999999999999999999995
No 26
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=2.1e-35 Score=261.57 Aligned_cols=214 Identities=18% Similarity=0.164 Sum_probs=192.4
Q ss_pred CCChHHHHHHHHhCCcccccccCCCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHHHcC
Q 014730 4 KNDWPGVEDFVTNHPDALTAKIVEPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCAAKG 83 (419)
Q Consensus 4 ~g~~~~v~~ll~~~~~~~~~~~~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~~~g 83 (419)
.|+.+++++|+++ +.+++...+..| .||||+|+ . .|+.+++++|++.| .+++..|..|.||||+|+..|
T Consensus 1 gg~~~~i~~Ll~~-g~~~~~~~d~~g-~t~L~~A~-~------~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~ 69 (223)
T 2f8y_A 1 GDAPAVISDFIYQ-GASLHNQTDRTG-ETALHLAA-R------YSRSDAAKRLLEAS--ADANIQDNMGRTPLHAAVSAD 69 (223)
T ss_dssp ----CCEETTEET-TCCTTCCCTTTC-CCHHHHHH-H------TTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTT
T ss_pred CCcHHHHHHHHHc-CCCcccccCCCC-CchHHHHH-H------cCCHHHHHHHHHcC--CCCCCcCCCCCCHHHHHHHcC
Confidence 3778889999988 666665548899 99999999 9 99999999999999 899999999999999999999
Q ss_pred CHHHHHHHHhcCCCCCccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhhC
Q 014730 84 NLKALKVLLKYNPDLTNIRDSDGYLPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLIAANLYDVALDLLKLH 163 (419)
Q Consensus 84 ~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~ 163 (419)
+.+++++|+++++..++.++..|.||||+|+..|+.+++++|++.|++++. .+..|.||||+|+..|+.+++++|++.|
T Consensus 70 ~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 148 (223)
T 2f8y_A 70 AQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNA-VDDLGKSALHWAAAVNNVDAAVVLLKNG 148 (223)
T ss_dssp CHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTC-BCTTSCBHHHHHHHTTCHHHHHHHHHTT
T ss_pred CHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcC-cCCCCCcHHHHHHHcCCHHHHHHHHHcC
Confidence 999999999999854888999999999999999999999999999999999 9999999999999999999999999998
Q ss_pred CCCCcCCCCCCCcHHHHHHhCCCCCCCCCchhHHHHHHHhhhcccCCCCcccccccccccCCCCCCCCCCCccccccccC
Q 014730 164 PTIGRDNIDSRRIVLNTLSQKPYAFASGSRLGRLRRLIYNCWCQQSCIPLEKERVPSIQSNDDQNVDGDTENFTVTSKMH 243 (419)
Q Consensus 164 ~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (419)
+++. .+|..|
T Consensus 149 ~~~~-~~~~~g--------------------------------------------------------------------- 158 (223)
T 2f8y_A 149 ANKD-MQNNRE--------------------------------------------------------------------- 158 (223)
T ss_dssp CCTT-CCCTTC---------------------------------------------------------------------
T ss_pred CCCC-CcCCCC---------------------------------------------------------------------
Confidence 7765 222211
Q ss_pred CCCCCCCCChhhHHHHHhhHHHHHHHHHHHHhhhcCchhHHHHHHhhhhHhHHHHHHHHHhhhhhccccchhhhhHHHHH
Q 014730 244 PKESTPFGSTQQITAIFGLMFHKLNRMLWNALMRLAPSIKVIHDQKLTHMRTVEIVRIICEGVVWTNFQKSAQLSGAMLS 323 (419)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~t~L~~ 323 (419)
.||||+
T Consensus 159 --------------------------------------------------------------------------~t~L~~ 164 (223)
T 2f8y_A 159 --------------------------------------------------------------------------ETPLFL 164 (223)
T ss_dssp --------------------------------------------------------------------------CCHHHH
T ss_pred --------------------------------------------------------------------------cCHHHH
Confidence 568888
Q ss_pred HHHhChHHHHHHHHHhcCCccccccCCCCchHHHHHhhchHHHHHHHhhcc
Q 014730 324 AAILGIPEVVNEFIMAYDSCSNWSNQDGHTIFDHAVLHRREKVFNLIQGVN 374 (419)
Q Consensus 324 A~~~g~~e~v~~Ll~~~~~d~~~~~~~g~t~Lh~Av~~~~~~iv~~L~~~~ 374 (419)
|+..|+.+++++|++. |++++.++..|+||||+|+++++.+++++|++++
T Consensus 165 A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g 214 (223)
T 2f8y_A 165 AAREGSYETAKVLLDH-FANRDITDHMDRLPRDIAQERMHHDIVRLLDEYN 214 (223)
T ss_dssp HHHHTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred HHHcCCHHHHHHHHHc-CCCCccccccCCCHHHHHHHhcchHHHHHHHHcC
Confidence 8888999999999999 9999999999999999999999999999999996
No 27
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=1.8e-35 Score=265.07 Aligned_cols=215 Identities=21% Similarity=0.228 Sum_probs=195.0
Q ss_pred CccCCChHHHHHHHH---hCCcccccccCCCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHH
Q 014730 1 MIEKNDWPGVEDFVT---NHPDALTAKIVEPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVI 77 (419)
Q Consensus 1 A~~~g~~~~v~~ll~---~~~~~~~~~~~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~ 77 (419)
|++.|+.++|+.|++ ..+.+++.+ +..| .||||+|+ . .|+.+++++|++.| .+++..+..|.||||
T Consensus 16 A~~~g~~~~v~~Ll~~~~~~~~~~~~~-~~~g-~t~L~~A~-~------~~~~~~v~~Ll~~g--~~~~~~~~~g~t~l~ 84 (241)
T 1k1a_A 16 AVVQGNLPAVHRLVNLFQQGGRELDIY-NNLR-QTPLHLAV-I------TTLPSVVRLLVTAG--ASPMALDRHGQTAAH 84 (241)
T ss_dssp HHHTTCHHHHHHHHHHHHHTTCCSCCC-CTTS-CCHHHHHH-H------TTCHHHHHHHHHTT--CCTTCCCTTSCCHHH
T ss_pred HHHcCCHHHHHHHHHHHHhcCCCCCcc-cccC-CCHHHHHH-H------cCCHHHHHHHHHcC--CCccccCCCCCCHHH
Confidence 678999999999998 368899998 9999 99999999 9 99999999999999 899999999999999
Q ss_pred HHHHcCCHHHHHHHHhcCC----CCCccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccC-CCCCcHHHHHHHcCc
Q 014730 78 FCAAKGNLKALKVLLKYNP----DLTNIRDSDGYLPVHNAAYYGHKDTFQYLLEATNGVDIYRG-NDGAMVLLFLIAANL 152 (419)
Q Consensus 78 ~A~~~g~~~~~~~Ll~~~~----~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~-~~g~t~l~~a~~~~~ 152 (419)
+|+..|+.+++++|+++++ + ++.++..|.||||+|+..|+.+++++|++.|++++. .+ ..|.||||+|+..|+
T Consensus 85 ~A~~~~~~~~~~~Ll~~~~~~~~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~~g~t~L~~A~~~~~ 162 (241)
T 1k1a_A 85 LACEHRSPTCLRALLDSAAPGTLD-LEARNYDGLTALHVAVNTECQETVQLLLERGADIDA-VDIKSGRSPLIHAVENNS 162 (241)
T ss_dssp HHHHTTCHHHHHHHHHHSCTTSCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTTCCCHHHHHHHTTC
T ss_pred HHHHcCCHHHHHHHHHcCCCcccc-ccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCccc-ccccCCCcHHHHHHHcCC
Confidence 9999999999999999987 5 688899999999999999999999999999999988 77 789999999999999
Q ss_pred HHHHHHHHhhCCCCCcCCCCCCCcHHHHHHhCCCCCCCCCchhHHHHHHHhhhcccCCCCcccccccccccCCCCCCCCC
Q 014730 153 YDVALDLLKLHPTIGRDNIDSRRIVLNTLSQKPYAFASGSRLGRLRRLIYNCWCQQSCIPLEKERVPSIQSNDDQNVDGD 232 (419)
Q Consensus 153 ~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (419)
.+++++|++.|+++. .+|..|
T Consensus 163 ~~~v~~Ll~~g~~~~-~~~~~g---------------------------------------------------------- 183 (241)
T 1k1a_A 163 LSMVQLLLQHGANVN-AQMYSG---------------------------------------------------------- 183 (241)
T ss_dssp HHHHHHHHHTTCCTT-CBCTTS----------------------------------------------------------
T ss_pred HHHHHHHHHcCCCCC-CcCCCC----------------------------------------------------------
Confidence 999999999988765 222111
Q ss_pred CCccccccccCCCCCCCCCChhhHHHHHhhHHHHHHHHHHHHhhhcCchhHHHHHHhhhhHhHHHHHHHHHhhhhhcccc
Q 014730 233 TENFTVTSKMHPKESTPFGSTQQITAIFGLMFHKLNRMLWNALMRLAPSIKVIHDQKLTHMRTVEIVRIICEGVVWTNFQ 312 (419)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~ 312 (419)
T Consensus 184 -------------------------------------------------------------------------------- 183 (241)
T 1k1a_A 184 -------------------------------------------------------------------------------- 183 (241)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred chhhhhHHHHHHHHhChHHHHHHHHHhcCCccccccCCCCchHHHHHhhchHHHHHHHhhc
Q 014730 313 KSAQLSGAMLSAAILGIPEVVNEFIMAYDSCSNWSNQDGHTIFDHAVLHRREKVFNLIQGV 373 (419)
Q Consensus 313 ~~~~~~t~L~~A~~~g~~e~v~~Ll~~~~~d~~~~~~~g~t~Lh~Av~~~~~~iv~~L~~~ 373 (419)
.||||+|+..|+.+++++|++. |++++.++..|+||||+|+.+++.++++.|.+.
T Consensus 184 -----~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~tpl~~A~~~~~~~i~~~l~~~ 238 (241)
T 1k1a_A 184 -----SSALHSASGRGLLPLVRTLVRS-GADSSLKNCHNDTPLMVARSRRVIDILRGKATR 238 (241)
T ss_dssp -----CBHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCTTTTCSSHHHHHHHTC----
T ss_pred -----CCHHHHHHHcCCHHHHHHHHhc-CCCCCCcCCCCCCHHHHHHhcCcHHHHhhhccC
Confidence 5788888888999999999999 999999999999999999999999999999887
No 28
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=2.9e-35 Score=270.84 Aligned_cols=236 Identities=13% Similarity=0.061 Sum_probs=196.4
Q ss_pred CccCCChHHHHHHHHhCCcccccccCCCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHH
Q 014730 1 MIEKNDWPGVEDFVTNHPDALTAKIVEPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCA 80 (419)
Q Consensus 1 A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~ 80 (419)
++...+.+.+..++.+. +++.+ |..| .||||+|+ . .|+.+++++|++.| ++++.. +|.||||+|+
T Consensus 6 ~i~~~~~~~v~~lL~~~--~~~~~-d~~g-~t~L~~A~-~------~g~~~~v~~Ll~~g--~~~~~~--~g~t~L~~A~ 70 (285)
T 3kea_A 6 RINTWKSKQLKSFLSSK--DTFKA-DVHG-HSASYYAI-A------DNNVRLVCTLLNAG--ALKNLL--ENEFPLHQAA 70 (285)
T ss_dssp TGGGCCHHHHHHHHHST--TTTCC-CTTS-CCHHHHHH-H------TTCHHHHHHHHHTT--GGGSCC--TTCCHHHHHT
T ss_pred HHHhcCHHHHHHHHHhC--CCCcc-CCCC-CCHHHHHH-H------cCCHHHHHHHHhCC--CCCCCC--CCCCHHHHHH
Confidence 35677888888888774 57888 9999 99999999 9 99999999999999 888877 4899999999
Q ss_pred HcCCHHHHHHHHhcCCCCCccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccCCCC-CcHHHHHHHcCcHHHHHHH
Q 014730 81 AKGNLKALKVLLKYNPDLTNIRDSDGYLPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDG-AMVLLFLIAANLYDVALDL 159 (419)
Q Consensus 81 ~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g-~t~l~~a~~~~~~~~~~~L 159 (419)
..|+.+++++|+++|++ ++.++..|.||||+|+..|+.+++++|+++|++++. .+..| .||||+|+..|+.+++++|
T Consensus 71 ~~g~~~~v~~Ll~~ga~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~~~~g~~t~L~~A~~~~~~~~v~~L 148 (285)
T 3kea_A 71 TLEDTKIVKILLFSGLD-DSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMF-YGKTGWKTSFYHAVMLNDVSIVSYF 148 (285)
T ss_dssp TSSSCHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGG-CSSSGGGSHHHHHHHTTCHHHHHHH
T ss_pred HcCCHHHHHHHHHCCCC-CCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCc-cCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 99999999999999999 799999999999999999999999999999999999 89999 8999999999999999999
Q ss_pred HhhCCCCCcCCCCCCCcHHHHHHhCCCCCCCCCchhHHHHHHHhhhcccCCCCcccccccccccCCCCCCCCCCCccccc
Q 014730 160 LKLHPTIGRDNIDSRRIVLNTLSQKPYAFASGSRLGRLRRLIYNCWCQQSCIPLEKERVPSIQSNDDQNVDGDTENFTVT 239 (419)
Q Consensus 160 l~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (419)
++.|++.. ....|.||||+|+..+.
T Consensus 149 l~~g~~~~--~~~~g~t~L~~A~~~g~----------------------------------------------------- 173 (285)
T 3kea_A 149 LSEIPSTF--DLAILLSCIHITIKNGH----------------------------------------------------- 173 (285)
T ss_dssp HTTSCTTC--CCSTHHHHHHHHHHTTC-----------------------------------------------------
T ss_pred HhCCCccc--cccCCccHHHHHHHcCh-----------------------------------------------------
Confidence 99998753 12378889988887632
Q ss_pred cccCCCCCCCCCChhhHHHHHhhHHHHHHHHHHHHhhhcCchhHHHHHHhhhhHhHHHHHHHHHhhhhhccccchhhh-h
Q 014730 240 SKMHPKESTPFGSTQQITAIFGLMFHKLNRMLWNALMRLAPSIKVIHDQKLTHMRTVEIVRIICEGVVWTNFQKSAQL-S 318 (419)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~-~ 318 (419)
.++++.|++.+. +++..+.. .
T Consensus 174 --------------------------------------------------------~~~v~~Ll~~ga--d~n~~~~~g~ 195 (285)
T 3kea_A 174 --------------------------------------------------------VDMMILLLDYMT--STNTNNSLLF 195 (285)
T ss_dssp --------------------------------------------------------HHHHHHHHHHHH--HTCTTCCCBC
T ss_pred --------------------------------------------------------HHHHHHHHHcCC--CCCcccCCCC
Confidence 122333333333 33322211 5
Q ss_pred HH-HHHHHHhChHHHHHHHHHhcCCccccccCCCCchHHHHHhhchHHHHHHHhhcc
Q 014730 319 GA-MLSAAILGIPEVVNEFIMAYDSCSNWSNQDGHTIFDHAVLHRREKVFNLIQGVN 374 (419)
Q Consensus 319 t~-L~~A~~~g~~e~v~~Ll~~~~~d~~~~~~~g~t~Lh~Av~~~~~~iv~~L~~~~ 374 (419)
|| ||+|+..|+.++|++|++. |++++..+ +.|+..++.+++++|+++|
T Consensus 196 t~~L~~A~~~~~~~~v~~Ll~~-gad~~~~~-------~~a~~~~~~~iv~~Ll~~g 244 (285)
T 3kea_A 196 IPDIKLAIDNKDIEMLQALFKY-DINIYSAN-------LENVLLDDAEIAKMIIEKH 244 (285)
T ss_dssp CTTHHHHHHHTCHHHHHHHTTS-CBCSTTTT-------GGGGTTTCHHHHHHHHHHH
T ss_pred ChHHHHHHHcCCHHHHHHHHHc-CCCCCCCC-------hhhhhcCCHHHHHHHHHcC
Confidence 65 8999999999999999988 88888877 3567788889999998885
No 29
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=7.7e-36 Score=272.01 Aligned_cols=213 Identities=17% Similarity=0.194 Sum_probs=163.8
Q ss_pred CccCCChHHHHHHHHhCCcc-------cccccCCCCCccHHHHHHHhhcccCCCchH-HHHHHHHhhCCCccccccCCCC
Q 014730 1 MIEKNDWPGVEDFVTNHPDA-------LTAKIVEPGSKTIFHTIAELLVDDDSDEAT-CLLDKLATKVDPQTLARQDNHG 72 (419)
Q Consensus 1 A~~~g~~~~v~~ll~~~~~~-------~~~~~~~~g~~t~L~~A~~~~~~~~~~g~~-~~v~~Ll~~~~~~~~~~~~~~g 72 (419)
||+.|+.++|+.|++....+ ++.. +..| .||||.|+ . .++. .++++|++.| +++|.+|..|
T Consensus 18 A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~-~~~~-~t~L~~a~-~------~~~~~~~v~~Ll~~G--advn~~d~~G 86 (269)
T 4b93_B 18 AVADGDLEMVRYLLEWTEEDLEDAEDTVSAA-DPEF-CHPLCQCP-K------CAPAQKRLAKVPASG--LGVNVTSQDG 86 (269)
T ss_dssp HHHTTCHHHHHHHHTCC-------------------------------------------------CC--CCTTCCCTTS
T ss_pred HHHcCCHHHHHHHHHCCCccccccccccccc-CccC-CCHHHHHH-H------hCCHHHHHHHHHHCC--CCCCCcCCCC
Confidence 68899999999999874332 4555 7788 99999999 7 6665 5899999999 9999999999
Q ss_pred ChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHHHcCc
Q 014730 73 HTAVIFCAAKGNLKALKVLLKYNPDLTNIRDSDGYLPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLIAANL 152 (419)
Q Consensus 73 ~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~~ 152 (419)
.||||+|+..|+.+++++|++.+++ ++.++..|.||+|.|+..++.+++++|++.|++++. .+..|.||||+|+..|+
T Consensus 87 ~TpLh~A~~~g~~~~v~~Ll~~~a~-~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~-~d~~g~TpL~~A~~~g~ 164 (269)
T 4b93_B 87 SSPLHVAALHGRADLIPLLLKHGAN-AGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNK-KDLSGNTPLIYACSGGH 164 (269)
T ss_dssp CCHHHHHHHTTCTTHHHHHHHTTCC-TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCC-CCTTCCCHHHHHHHTTC
T ss_pred CCHHHHHHHcCcHHHHHHHHhcCCC-cCccCCCCCCccccccccChHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHCCC
Confidence 9999999999999999999999999 799999999999999999999999999999999999 99999999999999999
Q ss_pred HHHHHHHHhhCCCCCcCCCCCCCcHHHHHHhCCCCCCCCCchhHHHHHHHhhhcccCCCCcccccccccccCCCCCCCCC
Q 014730 153 YDVALDLLKLHPTIGRDNIDSRRIVLNTLSQKPYAFASGSRLGRLRRLIYNCWCQQSCIPLEKERVPSIQSNDDQNVDGD 232 (419)
Q Consensus 153 ~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (419)
.+++++|++.|+++. .++..|
T Consensus 165 ~~~v~~Ll~~gadvn-~~~~~g---------------------------------------------------------- 185 (269)
T 4b93_B 165 HELVALLLQHGASIN-ASNNKG---------------------------------------------------------- 185 (269)
T ss_dssp GGGHHHHHHTTCCTT-CBCTTS----------------------------------------------------------
T ss_pred HHHHHHHHHCCCCCC-ccccCC----------------------------------------------------------
Confidence 999999999998765 222221
Q ss_pred CCccccccccCCCCCCCCCChhhHHHHHhhHHHHHHHHHHHHhhhcCchhHHHHHHhhhhHhHHHHHHHHHhhhhhcccc
Q 014730 233 TENFTVTSKMHPKESTPFGSTQQITAIFGLMFHKLNRMLWNALMRLAPSIKVIHDQKLTHMRTVEIVRIICEGVVWTNFQ 312 (419)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~ 312 (419)
T Consensus 186 -------------------------------------------------------------------------------- 185 (269)
T 4b93_B 186 -------------------------------------------------------------------------------- 185 (269)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred chhhhhHHHHHHHHhChHHHHHHHHHhcCCccccccCCCCchHHHHHhhchHHHHHHHhhc
Q 014730 313 KSAQLSGAMLSAAILGIPEVVNEFIMAYDSCSNWSNQDGHTIFDHAVLHRREKVFNLIQGV 373 (419)
Q Consensus 313 ~~~~~~t~L~~A~~~g~~e~v~~Ll~~~~~d~~~~~~~g~t~Lh~Av~~~~~~iv~~L~~~ 373 (419)
.||||+|+..|+.++|++||+. |+|++.+|..|+||||+|+++++ ++++|...
T Consensus 186 -----~t~Lh~A~~~g~~~~v~~Ll~~-Gad~~~~d~~G~TpL~~A~~~~~--i~~lL~~l 238 (269)
T 4b93_B 186 -----NTALHEAVIEKHVFVVELLLLH-GASVQVLNKRQRTAVDCAEQNSK--IMELLQVV 238 (269)
T ss_dssp -----CBHHHHHHHTTCHHHHHHHHHT-TCCSCCCCTTSCCSGGGSCTTCH--HHHHTTC-
T ss_pred -----CcHHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHhCCc--HHHHHHHH
Confidence 5688888888999999999999 99999999999999999998775 55555444
No 30
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=1.6e-34 Score=258.34 Aligned_cols=215 Identities=20% Similarity=0.180 Sum_probs=195.1
Q ss_pred CccCCChHHHHHHHHhCCcccccccCCCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHH
Q 014730 1 MIEKNDWPGVEDFVTNHPDALTAKIVEPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCA 80 (419)
Q Consensus 1 A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~ 80 (419)
|+..|+.+++++|+++ +.+++.. +..| .||||+|+ . .|+.+++++|++.| .+++..+..|.||||+|+
T Consensus 18 A~~~g~~~~v~~Ll~~-g~~~~~~-~~~g-~t~L~~A~-~------~~~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~ 85 (237)
T 3b7b_A 18 AAEAGHVDICHMLVQA-GANIDTC-SEDQ-RTPLMEAA-E------NNHLEAVKYLIKAG--ALVDPKDAEGSTCLHLAA 85 (237)
T ss_dssp HHHHTCHHHHHHHHHT-TCCTTCC-CTTC-CCHHHHHH-H------TTCHHHHHHHHTTT--CCCCCCCTTSCCHHHHHH
T ss_pred HHHcCcHHHHHHHHHc-CCCcCcc-CCCC-CCHHHHHH-H------hCCHHHHHHHHhCC--CCCCCCCCCCCcHHHHHH
Confidence 6788999999999988 8889888 9999 99999999 9 99999999999999 899999999999999999
Q ss_pred HcCCHHHHHHHHhcCCCCCccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHHHcCcHHHHHHHH
Q 014730 81 AKGNLKALKVLLKYNPDLTNIRDSDGYLPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLIAANLYDVALDLL 160 (419)
Q Consensus 81 ~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll 160 (419)
..|+.+++++|+++++..++.++..|.||||+|+..|+.+++++|+++|++++. .+..|.||||.|+..|+.+++++|+
T Consensus 86 ~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll 164 (237)
T 3b7b_A 86 KKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINI-RDNEENICLHWAAFSGCVDIAEILL 164 (237)
T ss_dssp HTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHHCCHHHHHHHH
T ss_pred HcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCc-cCCCCCCHHHHHHHCCCHHHHHHHH
Confidence 999999999999999444888999999999999999999999999999999999 9999999999999999999999999
Q ss_pred hhCCCCCcCCCCCCCcHHHHHHhCCCCCCCCCchhHHHHHHHhhhcccCCCCcccccccccccCCCCCCCCCCCcccccc
Q 014730 161 KLHPTIGRDNIDSRRIVLNTLSQKPYAFASGSRLGRLRRLIYNCWCQQSCIPLEKERVPSIQSNDDQNVDGDTENFTVTS 240 (419)
Q Consensus 161 ~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (419)
+.|+++. .+|..|
T Consensus 165 ~~g~~~~-~~~~~g------------------------------------------------------------------ 177 (237)
T 3b7b_A 165 AAKCDLH-AVNIHG------------------------------------------------------------------ 177 (237)
T ss_dssp TTTCCTT-CCCTTC------------------------------------------------------------------
T ss_pred HcCCCCC-CcCCCC------------------------------------------------------------------
Confidence 9988765 222222
Q ss_pred ccCCCCCCCCCChhhHHHHHhhHHHHHHHHHHHHhhhcCchhHHHHHHhhhhHhHHHHHHHHHhhhhhccccchhhhhHH
Q 014730 241 KMHPKESTPFGSTQQITAIFGLMFHKLNRMLWNALMRLAPSIKVIHDQKLTHMRTVEIVRIICEGVVWTNFQKSAQLSGA 320 (419)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~t~ 320 (419)
.||
T Consensus 178 -----------------------------------------------------------------------------~t~ 180 (237)
T 3b7b_A 178 -----------------------------------------------------------------------------DSP 180 (237)
T ss_dssp -----------------------------------------------------------------------------CCH
T ss_pred -----------------------------------------------------------------------------CCH
Confidence 568
Q ss_pred HHHHHHhChHHHHHHHHHhcCCccccccCCCCchHHHHHhhchHHHHHHHhhc
Q 014730 321 MLSAAILGIPEVVNEFIMAYDSCSNWSNQDGHTIFDHAVLHRREKVFNLIQGV 373 (419)
Q Consensus 321 L~~A~~~g~~e~v~~Ll~~~~~d~~~~~~~g~t~Lh~Av~~~~~~iv~~L~~~ 373 (419)
||+|+..|+.+++++|++. |++++.++..|+||||+|+.+++...+..+++.
T Consensus 181 L~~A~~~~~~~~v~~Ll~~-gad~~~~d~~g~t~l~~A~~~~~~~~~~~l~~~ 232 (237)
T 3b7b_A 181 LHIAARENRYDCVVLFLSR-DSDVTLKNKEGETPLQCASLNSQVWSALQMSKA 232 (237)
T ss_dssp HHHHHHTTCHHHHHHHHTT-TCCTTCCCTTSCCHHHHSCTTCHHHHHHHHHHH
T ss_pred HHHHHHhCCHhHHHHHHHc-CCCCCccCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 8888888899999999999 999999999999999999999998665555543
No 31
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=3.5e-34 Score=254.50 Aligned_cols=214 Identities=18% Similarity=0.172 Sum_probs=189.4
Q ss_pred CccCCChHHHHHHHHhCCcccccccCCCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccc-cCCCCChHHHHH
Q 014730 1 MIEKNDWPGVEDFVTNHPDALTAKIVEPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLAR-QDNHGHTAVIFC 79 (419)
Q Consensus 1 A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~-~~~~g~t~L~~A 79 (419)
|++.|+.+.|+.|+++.+...+.+ +..| .||||+|+ . .|+.+++++|++.|.+.+++. .+..|.||||+|
T Consensus 9 A~~~g~~~~v~~Ll~~~~~~~~~~-~~~g-~t~L~~A~-~------~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A 79 (228)
T 2dzn_A 9 ACMENEFFKVQELLHSKPSLLLQK-DQDG-RIPLHWSV-S------FQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIA 79 (228)
T ss_dssp HHHTTCHHHHHHHHHHCGGGTTCC-CTTS-CCHHHHHH-H------TTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHH
T ss_pred HHHhCCHHHHHHHHhcCccccccC-CCCC-CCHHHHHH-H------cCCHHHHHHHHhccccccccccCCCCCCCHHHHH
Confidence 678999999999999966666556 9999 99999999 9 999999999999994445555 788999999999
Q ss_pred HHcCCHHHHHHHHhcC--CCCCccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHHHcCcHHHHH
Q 014730 80 AAKGNLKALKVLLKYN--PDLTNIRDSDGYLPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLIAANLYDVAL 157 (419)
Q Consensus 80 ~~~g~~~~~~~Ll~~~--~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~ 157 (419)
+..|+.+++++|+++| ++ ++.++..|.||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.++++
T Consensus 80 ~~~~~~~~~~~Ll~~g~~~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~ 157 (228)
T 2dzn_A 80 CSVGNLEVVKSLYDRPLKPD-LNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRI-KDKFNQIPLHRAASVGSLKLIE 157 (228)
T ss_dssp HHHCCHHHHHHHHSSSSCCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCC-CCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHcCCHHHHHHHHhCCCCcc-cccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccc-cCCCCCCHHHHHHHcCCHHHHH
Confidence 9999999999999998 77 788899999999999999999999999999999999 9999999999999999999999
Q ss_pred HHHhhC-CCCCcCCCCCCCcHHHHHHhCCCCCCCCCchhHHHHHHHhhhcccCCCCcccccccccccCCCCCCCCCCCcc
Q 014730 158 DLLKLH-PTIGRDNIDSRRIVLNTLSQKPYAFASGSRLGRLRRLIYNCWCQQSCIPLEKERVPSIQSNDDQNVDGDTENF 236 (419)
Q Consensus 158 ~Ll~~~-~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (419)
+|++.| +++. .+|..|
T Consensus 158 ~Ll~~g~~~~~-~~d~~g-------------------------------------------------------------- 174 (228)
T 2dzn_A 158 LLCGLGKSAVN-WQDKQG-------------------------------------------------------------- 174 (228)
T ss_dssp HHHTTTCCCSC-CCCTTS--------------------------------------------------------------
T ss_pred HHHhcCccccc-CcCCCC--------------------------------------------------------------
Confidence 999998 5443 222221
Q ss_pred ccccccCCCCCCCCCChhhHHHHHhhHHHHHHHHHHHHhhhcCchhHHHHHHhhhhHhHHHHHHHHHhhhhhccccchhh
Q 014730 237 TVTSKMHPKESTPFGSTQQITAIFGLMFHKLNRMLWNALMRLAPSIKVIHDQKLTHMRTVEIVRIICEGVVWTNFQKSAQ 316 (419)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~ 316 (419)
T Consensus 175 -------------------------------------------------------------------------------- 174 (228)
T 2dzn_A 175 -------------------------------------------------------------------------------- 174 (228)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhHHHHHHHHhChHHHHHHHH-HhcCCccccccCCCCchHHHHHhhchHHHHHHHhhc
Q 014730 317 LSGAMLSAAILGIPEVVNEFI-MAYDSCSNWSNQDGHTIFDHAVLHRREKVFNLIQGV 373 (419)
Q Consensus 317 ~~t~L~~A~~~g~~e~v~~Ll-~~~~~d~~~~~~~g~t~Lh~Av~~~~~~iv~~L~~~ 373 (419)
.||||+|+..|+.+++++|+ +. |++++..+..|+||||+|+.. +++++|+++
T Consensus 175 -~t~L~~A~~~~~~~~v~~Ll~~~-ga~~~~~~~~g~t~l~~A~~~---~~~~~l~~~ 227 (228)
T 2dzn_A 175 -WTPLFHALAEGHGDAAVLLVEKY-GAEYDLVDNKGAKAEDVALNE---QVKKFFLNN 227 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHH-CCCSCCBCTTSCBGGGGCSST---THHHHHHTT
T ss_pred -CCHHHHHHHcCCHHHHHHHHHhc-CCCCCccCCCCCcHHHHHHHH---HHHHHHHhc
Confidence 56888888889999999999 77 999999999999999999876 577777765
No 32
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=6.9e-35 Score=277.88 Aligned_cols=244 Identities=9% Similarity=0.015 Sum_probs=210.3
Q ss_pred CccCCChHHHHHHHHhCCcccccccCCCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHH
Q 014730 1 MIEKNDWPGVEDFVTNHPDALTAKIVEPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCA 80 (419)
Q Consensus 1 A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~ 80 (419)
|++.|+.++|++|++. +.+++.+ +..| .||||+|| . .|+.++|++|++.| .++ .+..|.||||+|+
T Consensus 27 Aa~~g~~~~v~~Ll~~-g~~~~~~-d~~g-~t~L~~A~-~------~g~~~~v~~Ll~~g--~~~--~~~~g~t~L~~A~ 92 (364)
T 3ljn_A 27 AARKGQTDEVRRLIET-GVSPTIQ-NRFG-CTALHLAC-K------FGCVDTAKYLASVG--EVH--SLWHGQKPIHLAV 92 (364)
T ss_dssp HHHHTCHHHHHHHHHT-TCCTTCC-CTTC-CCHHHHHH-H------HCCHHHHHHHHHHC--CCC--CCBTTBCHHHHHH
T ss_pred HHHcCCHHHHHHHHHc-CCCcccc-CCCC-CcHHHHHH-H------cCCHHHHHHHHHCC--CCc--cccCCCCHHHHHH
Confidence 6789999999999988 8899999 9999 99999999 9 99999999999999 533 3468999999999
Q ss_pred HcCCHHHHHHHHhc----CCCCCcc-----------------CCCCCchHHHHHHHcC--CHHHHHHHHhcCCCCccccC
Q 014730 81 AKGNLKALKVLLKY----NPDLTNI-----------------RDSDGYLPVHNAAYYG--HKDTFQYLLEATNGVDIYRG 137 (419)
Q Consensus 81 ~~g~~~~~~~Ll~~----~~~~~~~-----------------~~~~g~t~L~~A~~~g--~~~~~~~Ll~~g~~~~~~~~ 137 (419)
..|+.+++++|+++ +.+ ++. ++..|.||||+|+..| +.+++++|++.|++++. .+
T Consensus 93 ~~g~~~~v~~Ll~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~-~d 170 (364)
T 3ljn_A 93 MANKTDLVVALVEGAKERGQM-PESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTA-KD 170 (364)
T ss_dssp HTTCHHHHHHHHHHHHHHTCC-HHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTC-CC
T ss_pred HcCCHHHHHHHHHhccccCCC-HHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcc-cC
Confidence 99999999999999 776 555 7888999999999999 99999999999999999 99
Q ss_pred CCCCcHHHHHHHcCcHHHHHHHHhhCCC-----CCcCCCCCCCcHHHHHHhCCCCCCCCCchhHHHHHHHhhhcccCCCC
Q 014730 138 NDGAMVLLFLIAANLYDVALDLLKLHPT-----IGRDNIDSRRIVLNTLSQKPYAFASGSRLGRLRRLIYNCWCQQSCIP 212 (419)
Q Consensus 138 ~~g~t~l~~a~~~~~~~~~~~Ll~~~~~-----~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (419)
..|.||||+|+..|+.+++++|++.|++ +. ..|..|.||||+|+..+.
T Consensus 171 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-~~~~~g~t~L~~A~~~g~-------------------------- 223 (364)
T 3ljn_A 171 KADETPLMRAMEFRNREALDLMMDTVPSKSSLRLD-YANKQGNSHLHWAILINW-------------------------- 223 (364)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTT-CCCTTCCCTTHHHHTTTC--------------------------
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhccccccccccc-ccCCCCCcHHHHHHHcCC--------------------------
Confidence 9999999999999999999999999988 66 789999999999998642
Q ss_pred cccccccccccCCCCCCCCCCCccccccccCCCCCCCCCChhhHHHHHhhHHHHHHHHHHHHhhhcCchhHHHHHHhhhh
Q 014730 213 LEKERVPSIQSNDDQNVDGDTENFTVTSKMHPKESTPFGSTQQITAIFGLMFHKLNRMLWNALMRLAPSIKVIHDQKLTH 292 (419)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (419)
T Consensus 224 -------------------------------------------------------------------------------- 223 (364)
T 3ljn_A 224 -------------------------------------------------------------------------------- 223 (364)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhHHHHHHHHHhhhhhccccchhhh-hHHHHHHHHhChHHHHHHHHHhcCCcccc------------ccCCCCchHHHHH
Q 014730 293 MRTVEIVRIICEGVVWTNFQKSAQL-SGAMLSAAILGIPEVVNEFIMAYDSCSNW------------SNQDGHTIFDHAV 359 (419)
Q Consensus 293 ~~~~~~l~~l~~~~~~~~~~~~~~~-~t~L~~A~~~g~~e~v~~Ll~~~~~d~~~------------~~~~g~t~Lh~Av 359 (419)
.++++.|++.+. +++..+.. .||||+|+..|+.++|++|++. +++++. .+..|+|||+.|+
T Consensus 224 ---~~~v~~Ll~~ga--d~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aa 297 (364)
T 3ljn_A 224 ---EDVAMRFVEMGI--DVNMEDNEHTVPLYLSVRAAMVLLTKELLQK-TDVFLIQACPYHNGTTVLPDRVVWLDFVPAA 297 (364)
T ss_dssp ---HHHHHHHHTTTC--CTTCCCTTSCCHHHHHHHTCCHHHHHHHHHH-SCHHHHHTCTTBSSSSBCGGGCCCCTTSCSS
T ss_pred ---HHHHHHHHHcCC--CCCCCCCCCCCHHHHHHHhChHHHHHHHHHc-CCchhhhcCcccCcccccccccccccchhhh
Confidence 134444555554 44332222 8999999999999999999999 877533 3467899999999
Q ss_pred hhchHHHHHHHhhc
Q 014730 360 LHRREKVFNLIQGV 373 (419)
Q Consensus 360 ~~~~~~iv~~L~~~ 373 (419)
..++.+.+..|+..
T Consensus 298 ~~~~~~~v~~ll~~ 311 (364)
T 3ljn_A 298 ADPSKQEVLQLLQE 311 (364)
T ss_dssp CCHHHHHHHHHHHH
T ss_pred hccCHHHHHHHHHH
Confidence 99977776666666
No 33
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=3e-34 Score=264.09 Aligned_cols=210 Identities=12% Similarity=0.116 Sum_probs=193.1
Q ss_pred CccCCChHHHHHHHHhCCcccccccCCCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHH
Q 014730 1 MIEKNDWPGVEDFVTNHPDALTAKIVEPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCA 80 (419)
Q Consensus 1 A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~ 80 (419)
|+..|+.++|+.|++. +.+++.+ +..| .||||+|+ . .|+.+++++|++.| ++++.+|..|.||||+|+
T Consensus 66 Aa~~g~~~~v~~Ll~~-g~~~~~~-~~~g-~t~L~~A~-~------~g~~~~v~~Ll~~g--a~~~~~~~~g~t~L~~A~ 133 (285)
T 3d9h_A 66 AAIHGHQLSLRNLISQ-GWAVNII-TADH-VSPLHEAC-L------GGHLSCVKILLKHG--AQVNGVTADWHTPLFNAC 133 (285)
T ss_dssp HHHTTCHHHHHHHHHT-TCCSCEE-CTTC-CCHHHHHH-H------TTCHHHHHHHHHTT--CCSSCCCTTCCCHHHHHH
T ss_pred HHHcCCHHHHHHHHHC-CCCCCCc-CCCC-CCHHHHHH-H------CCcHHHHHHHHHCC--CCCCCCCCCCCCHHHHHH
Confidence 6789999999999987 7889999 9999 99999999 9 99999999999999 999999999999999999
Q ss_pred HcCCHHHHHHHHhcCCCCCccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHHHcCcHHHHHHHH
Q 014730 81 AKGNLKALKVLLKYNPDLTNIRDSDGYLPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLIAANLYDVALDLL 160 (419)
Q Consensus 81 ~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll 160 (419)
..|+.+++++|+++|++ ++. +..|.||||+|+..|+.+++++|++.|++++. .+..|.||||+|+..|+.+++++|+
T Consensus 134 ~~~~~~~v~~Ll~~g~~-~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~d~~g~t~L~~A~~~~~~~~v~~Ll 210 (285)
T 3d9h_A 134 VSGSWDCVNLLLQHGAS-VQP-ESDLASPIHEAARRGHVECVNSLIAYGGNIDH-KISHLGTPLYLACENQQRACVKKLL 210 (285)
T ss_dssp HHTCHHHHHHHHHTTCC-SSC-SCTTSCHHHHHHHHTCHHHHHHHHHTTCCTTC-CBTTTBCHHHHHHHTTCHHHHHHHH
T ss_pred HcCHHHHHHHHHHCCCC-CCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-cCCCCCCHHHHHHHcCcHHHHHHHH
Confidence 99999999999999998 554 44599999999999999999999999999999 9999999999999999999999999
Q ss_pred hhCCCCCcCCCCCCCcHHHHHHhCCCCCCCCCchhHHHHHHHhhhcccCCCCcccccccccccCCCCCCCCCCCcccccc
Q 014730 161 KLHPTIGRDNIDSRRIVLNTLSQKPYAFASGSRLGRLRRLIYNCWCQQSCIPLEKERVPSIQSNDDQNVDGDTENFTVTS 240 (419)
Q Consensus 161 ~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (419)
+.|+++. .+..|
T Consensus 211 ~~ga~~~--~~~~g------------------------------------------------------------------ 222 (285)
T 3d9h_A 211 ESGADVN--QGKGQ------------------------------------------------------------------ 222 (285)
T ss_dssp HTTCCTT--CCBTT------------------------------------------------------------------
T ss_pred HCCCCCC--CCCCC------------------------------------------------------------------
Confidence 9987654 11111
Q ss_pred ccCCCCCCCCCChhhHHHHHhhHHHHHHHHHHHHhhhcCchhHHHHHHhhhhHhHHHHHHHHHhhhhhccccchhhhhHH
Q 014730 241 KMHPKESTPFGSTQQITAIFGLMFHKLNRMLWNALMRLAPSIKVIHDQKLTHMRTVEIVRIICEGVVWTNFQKSAQLSGA 320 (419)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~t~ 320 (419)
.||
T Consensus 223 -----------------------------------------------------------------------------~t~ 225 (285)
T 3d9h_A 223 -----------------------------------------------------------------------------DSP 225 (285)
T ss_dssp -----------------------------------------------------------------------------BCH
T ss_pred -----------------------------------------------------------------------------CCH
Confidence 578
Q ss_pred HHHHHHhChHHHHHHHHHhcCCccccccCCCCchHHHHHhhchHHHHHHHhhc
Q 014730 321 MLSAAILGIPEVVNEFIMAYDSCSNWSNQDGHTIFDHAVLHRREKVFNLIQGV 373 (419)
Q Consensus 321 L~~A~~~g~~e~v~~Ll~~~~~d~~~~~~~g~t~Lh~Av~~~~~~iv~~L~~~ 373 (419)
||+|+..|+.++|++|++. |++++.+|..|+||||+|+ ++.+++++|+++
T Consensus 226 L~~A~~~~~~~~v~~Ll~~-gad~~~~d~~g~t~l~~A~--~~~~~~~~Ll~~ 275 (285)
T 3d9h_A 226 LHAVVRTASEELACLLMDF-GADTQAKNAEGKRPVELVP--PESPLAQLFLER 275 (285)
T ss_dssp HHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCGGGGSC--TTSHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHhc--CccHHHHHHHHh
Confidence 8888889999999999999 9999999999999999999 456899999998
No 34
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=2.3e-33 Score=257.29 Aligned_cols=237 Identities=11% Similarity=0.044 Sum_probs=149.5
Q ss_pred CccCCChHHHHHHHHhCCcc---cccccCCCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHH
Q 014730 1 MIEKNDWPGVEDFVTNHPDA---LTAKIVEPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVI 77 (419)
Q Consensus 1 A~~~g~~~~v~~ll~~~~~~---~~~~~~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~ 77 (419)
|++.|+.++|+.|++. +.+ ++.+ +..| .||||+|| . .|+.+++++|++.| ++++..|..|.||||
T Consensus 16 A~~~g~~~~v~~Ll~~-g~~~~~~~~~-~~~g-~t~L~~A~-~------~g~~~~v~~Ll~~g--a~~~~~~~~g~tpL~ 83 (282)
T 1oy3_D 16 AVIHQHEPFLDFLLGF-SAGHEYLDLQ-NDLG-QTALHLAA-I------LGEASTVEKLYAAG--AGVLVAERGGHTALH 83 (282)
T ss_dssp HHHTTCHHHHHHHHHH-HTTSGGGGCC-CTTS-CCHHHHHH-H------HTCHHHHHHHHHTT--CCSSCCCTTSCCHHH
T ss_pred HHHcCCHHHHHHHHhc-CCCccccccc-CCCC-CCHHHHHH-H------cCCHHHHHHHHHcC--CCCCCCCCCCCCHHH
Confidence 6789999999999987 444 7888 9999 99999999 9 99999999999999 999999999999999
Q ss_pred HHHHcCCHHHHHHHHhcCCCCC------------ccCCCCCchHHHHHHHcCC-HHHHHHHHhcCCCCccccCCCCCcHH
Q 014730 78 FCAAKGNLKALKVLLKYNPDLT------------NIRDSDGYLPVHNAAYYGH-KDTFQYLLEATNGVDIYRGNDGAMVL 144 (419)
Q Consensus 78 ~A~~~g~~~~~~~Ll~~~~~~~------------~~~~~~g~t~L~~A~~~g~-~~~~~~Ll~~g~~~~~~~~~~g~t~l 144 (419)
+|+..|+.+++++|+++++... ......+.++++.++..+. ......+...+.+++. .+..|.|||
T Consensus 84 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~t~L 162 (282)
T 1oy3_D 84 LACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEA-ENYDGHTPL 162 (282)
T ss_dssp HHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTC-CCTTSCCHH
T ss_pred HHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCC-cCCCCcCHH
Confidence 9999999999999999986521 0111123444554444332 2333444445555555 666666666
Q ss_pred HHHHHcCcHHHHHHHHhhCCCCCcCCC-CCCCcHHHHHHhCCCCCCCCCchhHHHHHHHhhhcccCCCCccccccccccc
Q 014730 145 LFLIAANLYDVALDLLKLHPTIGRDNI-DSRRIVLNTLSQKPYAFASGSRLGRLRRLIYNCWCQQSCIPLEKERVPSIQS 223 (419)
Q Consensus 145 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~-~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (419)
|+|+..|+.+++++|++.|+++. ..+ ..|.||||+|+..+.
T Consensus 163 ~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~~g~tpL~~A~~~~~------------------------------------- 204 (282)
T 1oy3_D 163 HVAVIHKDAEMVRLLRDAGADLN-KPEPTCGRTPLHLAVEAQA------------------------------------- 204 (282)
T ss_dssp HHHHHTTCHHHHHHHHHHTCCTT-CCCTTTCCCHHHHHHHTTC-------------------------------------
T ss_pred HHHHHcCCHHHHHHHHHcCCCCC-CCCCCCCcCHHHHHHHcCC-------------------------------------
Confidence 66666666666666666666665 343 336666666665421
Q ss_pred CCCCCCCCCCCccccccccCCCCCCCCCChhhHHHHHhhHHHHHHHHHHHHhhhcCchhHHHHHHhhhhHhHHHHHHHHH
Q 014730 224 NDDQNVDGDTENFTVTSKMHPKESTPFGSTQQITAIFGLMFHKLNRMLWNALMRLAPSIKVIHDQKLTHMRTVEIVRIIC 303 (419)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 303 (419)
.++++.|+
T Consensus 205 ------------------------------------------------------------------------~~~v~~Ll 212 (282)
T 1oy3_D 205 ------------------------------------------------------------------------ASVLELLL 212 (282)
T ss_dssp ------------------------------------------------------------------------HHHHHHHH
T ss_pred ------------------------------------------------------------------------HHHHHHHH
Confidence 12223333
Q ss_pred hhhhhccccchhhh-hHHHHHHHHhChHHHHHHHHHhcCCccccccCCCCchHHHHHhhch
Q 014730 304 EGVVWTNFQKSAQL-SGAMLSAAILGIPEVVNEFIMAYDSCSNWSNQDGHTIFDHAVLHRR 363 (419)
Q Consensus 304 ~~~~~~~~~~~~~~-~t~L~~A~~~g~~e~v~~Ll~~~~~d~~~~~~~g~t~Lh~Av~~~~ 363 (419)
+.+. +++..+.. .||||+|+..|+.++|++|++. |++++.++..|+|||++|.....
T Consensus 213 ~~ga--d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~tpl~~a~~~~~ 270 (282)
T 1oy3_D 213 KAGA--DPTARMYGGRTPLGSALLRPNPILARLLRAH-GAPEPEDGGDKLSPCSSSGSDSD 270 (282)
T ss_dssp HTTC--CTTCCCTTSCCHHHHHHTSSCHHHHHHHHHT-TCCCCCCC---------------
T ss_pred HcCC--CCcccccCCCCHHHHHHHcCCcHHHHHHHHc-CCCcCcCCCcccccccccCCccc
Confidence 3332 22222111 7899999999999999999999 99999999999999999987653
No 35
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=1.3e-34 Score=259.01 Aligned_cols=218 Identities=15% Similarity=0.167 Sum_probs=186.6
Q ss_pred CCCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCC--ccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCC
Q 014730 26 VEPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDP--QTLARQDNHGHTAVIFCAAKGNLKALKVLLKYNPDLTNIRD 103 (419)
Q Consensus 26 ~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~--~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~ 103 (419)
|.+| .||||+|+ . .|+.+++++|++.+.. .+++..|..|.||||+|+..|+.+++++|+++|++ ++.++
T Consensus 5 d~~g-~t~L~~A~-~------~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~ 75 (236)
T 1ikn_D 5 TEDG-DSFLHLAI-I------HEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCD-PELRD 75 (236)
T ss_dssp --CC-CCTTHHHH-H------TTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCC-SCCCC
T ss_pred CCCC-CchhHHHH-H------cCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcC
Confidence 8899 99999999 9 9999999999998721 26899999999999999999999999999999999 79999
Q ss_pred CCCchHHHHHHHcCCHHHHHHHHhcCCCC------ccccCCCCCcHHHHHHHcCcHHHHHHHHhhCCCCCcCCCC-CCCc
Q 014730 104 SDGYLPVHNAAYYGHKDTFQYLLEATNGV------DIYRGNDGAMVLLFLIAANLYDVALDLLKLHPTIGRDNID-SRRI 176 (419)
Q Consensus 104 ~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~------~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~-~g~~ 176 (419)
..|.||||+|+..|+.+++++|++.|+++ +. .+..|.||||+|+..|+.+++++|++.|+++. .++. .|
T Consensus 76 ~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~~g-- 151 (236)
T 1ikn_D 76 FRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKA-TNYNGHTCLHLASIHGYLGIVELLVSLGADVN-AQEPCNG-- 151 (236)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGC-CCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTT-CCCTTTC--
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhc-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CCCCCCC--
Confidence 99999999999999999999999999763 34 67889999999999999999999999998765 2211 11
Q ss_pred HHHHHHhCCCCCCCCCchhHHHHHHHhhhcccCCCCcccccccccccCCCCCCCCCCCccccccccCCCCCCCCCChhhH
Q 014730 177 VLNTLSQKPYAFASGSRLGRLRRLIYNCWCQQSCIPLEKERVPSIQSNDDQNVDGDTENFTVTSKMHPKESTPFGSTQQI 256 (419)
Q Consensus 177 ~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (419)
T Consensus 152 -------------------------------------------------------------------------------- 151 (236)
T 1ikn_D 152 -------------------------------------------------------------------------------- 151 (236)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhhHHHHHHHHHHHHhhhcCchhHHHHHHhhhhHhHHHHHHHHHhhhhhccccchhhhhHHHHHHHHhChHHHHHHH
Q 014730 257 TAIFGLMFHKLNRMLWNALMRLAPSIKVIHDQKLTHMRTVEIVRIICEGVVWTNFQKSAQLSGAMLSAAILGIPEVVNEF 336 (419)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~t~L~~A~~~g~~e~v~~L 336 (419)
.||||+|+..|+.++|++|
T Consensus 152 -------------------------------------------------------------~tpL~~A~~~~~~~~v~~L 170 (236)
T 1ikn_D 152 -------------------------------------------------------------RTALHLAVDLQNPDLVSLL 170 (236)
T ss_dssp -------------------------------------------------------------CCHHHHHHHTTCHHHHHHH
T ss_pred -------------------------------------------------------------CCHHHHHHHcCCHHHHHHH
Confidence 5788888888999999999
Q ss_pred HHhcCCccccccCCCCchHHHHHhhchHHHHHHHhhcccccceeeeccCCCCccchhcccccC
Q 014730 337 IMAYDSCSNWSNQDGHTIFDHAVLHRREKVFNLIQGVNFTTFLFSSRDKSGNNILHLAGRLVP 399 (419)
Q Consensus 337 l~~~~~d~~~~~~~g~t~Lh~Av~~~~~~iv~~L~~~~~~~~~~~~~D~~G~t~Lh~A~~~~~ 399 (419)
++. |++++..+..|+||||+|+.+++.+++++|++++.. ......+..|.||.+.+.....
T Consensus 171 l~~-ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~-~~~~~~~~~~~~~~~~~~~~~~ 231 (236)
T 1ikn_D 171 LKC-GADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLE-NLQMLPESEDEESYDTESEFTE 231 (236)
T ss_dssp HTT-TCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCG-GGSSCCCCCTTTCCCCC-----
T ss_pred HHc-CCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchh-hhhcCCccchHHHHhhhccccc
Confidence 999 999999999999999999999999999999999622 2345789999999999987654
No 36
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=1.5e-33 Score=249.68 Aligned_cols=202 Identities=20% Similarity=0.198 Sum_probs=179.9
Q ss_pred chHHHHHHHHhhCCCcccccc-CCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCchHHHHHHHcCCHHHHHHHH
Q 014730 48 EATCLLDKLATKVDPQTLARQ-DNHGHTAVIFCAAKGNLKALKVLLKYNPDLTNIRDSDGYLPVHNAAYYGHKDTFQYLL 126 (419)
Q Consensus 48 g~~~~v~~Ll~~~~~~~~~~~-~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll 126 (419)
|+.+++++|++.| .+++.. |..|.||||+|+..|+.+++++|+++|++ ++.++..|.||||+|+..|+.+++++|+
T Consensus 2 g~~~~i~~Ll~~g--~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 78 (223)
T 2f8y_A 2 DAPAVISDFIYQG--ASLHNQTDRTGETALHLAARYSRSDAAKRLLEASAD-ANIQDNMGRTPLHAAVSADAQGVFQILI 78 (223)
T ss_dssp ---CCEETTEETT--CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred CcHHHHHHHHHcC--CCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 6788899999999 777654 88999999999999999999999999998 7899999999999999999999999999
Q ss_pred hcCC-CCccccCCCCCcHHHHHHHcCcHHHHHHHHhhCCCCCcCCCCCCCcHHHHHHhCCCCCCCCCchhHHHHHHHhhh
Q 014730 127 EATN-GVDIYRGNDGAMVLLFLIAANLYDVALDLLKLHPTIGRDNIDSRRIVLNTLSQKPYAFASGSRLGRLRRLIYNCW 205 (419)
Q Consensus 127 ~~g~-~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~ 205 (419)
+.++ +++. .+..|.||||+|+..++.+++++|++.|+++. ..+..|
T Consensus 79 ~~~~~~~~~-~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~-~~~~~g------------------------------- 125 (223)
T 2f8y_A 79 RNRATDLDA-RMHDGTTPLILAARLAVEGMLEDLINSHADVN-AVDDLG------------------------------- 125 (223)
T ss_dssp HBTTSCTTC-CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT-CBCTTS-------------------------------
T ss_pred HcCCCCccc-CCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCc-CcCCCC-------------------------------
Confidence 9987 7777 88999999999999999999999999887654 221111
Q ss_pred cccCCCCcccccccccccCCCCCCCCCCCccccccccCCCCCCCCCChhhHHHHHhhHHHHHHHHHHHHhhhcCchhHHH
Q 014730 206 CQQSCIPLEKERVPSIQSNDDQNVDGDTENFTVTSKMHPKESTPFGSTQQITAIFGLMFHKLNRMLWNALMRLAPSIKVI 285 (419)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (419)
T Consensus 126 -------------------------------------------------------------------------------- 125 (223)
T 2f8y_A 126 -------------------------------------------------------------------------------- 125 (223)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhhhHhHHHHHHHHHhhhhhccccchhhhhHHHHHHHHhChHHHHHHHHHhcCCccccccCCCCchHHHHHhhchHH
Q 014730 286 HDQKLTHMRTVEIVRIICEGVVWTNFQKSAQLSGAMLSAAILGIPEVVNEFIMAYDSCSNWSNQDGHTIFDHAVLHRREK 365 (419)
Q Consensus 286 ~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~t~L~~A~~~g~~e~v~~Ll~~~~~d~~~~~~~g~t~Lh~Av~~~~~~ 365 (419)
.||||+|+..|+.+++++|++. |++++..+..|+||||+|+.+++.+
T Consensus 126 --------------------------------~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~ 172 (223)
T 2f8y_A 126 --------------------------------KSALHWAAAVNNVDAAVVLLKN-GANKDMQNNREETPLFLAAREGSYE 172 (223)
T ss_dssp --------------------------------CBHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHHTCHH
T ss_pred --------------------------------CcHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCcCHHHHHHHcCCHH
Confidence 5788888888999999999999 9999999999999999999999999
Q ss_pred HHHHHhhcccccceeeeccCCCCccchhcccccCCC
Q 014730 366 VFNLIQGVNFTTFLFSSRDKSGNNILHLAGRLVPSS 401 (419)
Q Consensus 366 iv~~L~~~~~~~~~~~~~D~~G~t~Lh~A~~~~~~~ 401 (419)
++++|+++ +.+++.+|..|.||||+|++.|+.+
T Consensus 173 ~v~~Ll~~---ga~~~~~~~~g~t~l~~A~~~~~~~ 205 (223)
T 2f8y_A 173 TAKVLLDH---FANRDITDHMDRLPRDIAQERMHHD 205 (223)
T ss_dssp HHHHHHHT---TCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred HHHHHHHc---CCCCccccccCCCHHHHHHHhcchH
Confidence 99999999 5677899999999999999998755
No 37
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=1.9e-32 Score=244.07 Aligned_cols=145 Identities=21% Similarity=0.173 Sum_probs=130.1
Q ss_pred CCCccHHHHHHHhhcccCCCchHHHHHHHHhh-CCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCC----ccC
Q 014730 28 PGSKTIFHTIAELLVDDDSDEATCLLDKLATK-VDPQTLARQDNHGHTAVIFCAAKGNLKALKVLLKYNPDLT----NIR 102 (419)
Q Consensus 28 ~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~-~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~----~~~ 102 (419)
.| .||||+|+ . .|+.+++++|++. | .+++.+|..|.||||+|+..|+.+++++|+++++++. +.+
T Consensus 2 ~g-~t~L~~A~-~------~g~~~~v~~Ll~~~g--~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~ 71 (232)
T 2rfa_A 2 IW-ESPLLLAA-K------ENDVQALSKLLKFEG--CEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSE 71 (232)
T ss_dssp CT-TCHHHHHH-H------TTCHHHHHHHHTTTC--SCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCST
T ss_pred CC-CCHHHHHH-H------cCCHHHHHHHHHhcC--CCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhcccccccc
Confidence 36 99999999 9 9999999999998 7 8999999999999999999999999999999998731 566
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccCC-------------CCCcHHHHHHHcCcHHHHHHHHhhCCCCCcC
Q 014730 103 DSDGYLPVHNAAYYGHKDTFQYLLEATNGVDIYRGN-------------DGAMVLLFLIAANLYDVALDLLKLHPTIGRD 169 (419)
Q Consensus 103 ~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~-------------~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~ 169 (419)
+..|.||||+|+..|+.+++++|+++|++++. .+. .|.||||+|+..|+.+++++|++.|+++. .
T Consensus 72 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~ 149 (232)
T 2rfa_A 72 LYEGQTALHIAVINQNVNLVRALLARGASVSA-RATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIR-A 149 (232)
T ss_dssp TTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTT-C
T ss_pred CCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCc-ccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-C
Confidence 77899999999999999999999999999988 554 79999999999999999999999999877 6
Q ss_pred CCCCCCcHHHHHHhC
Q 014730 170 NIDSRRIVLNTLSQK 184 (419)
Q Consensus 170 ~~~~g~~~l~~a~~~ 184 (419)
+|..|.||||+|+..
T Consensus 150 ~d~~g~t~L~~A~~~ 164 (232)
T 2rfa_A 150 QDSLGNTVLHILILQ 164 (232)
T ss_dssp CCTTSCCHHHHHHTC
T ss_pred CCCCCCCHHHHHHHc
Confidence 666666666666654
No 38
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=9e-34 Score=266.04 Aligned_cols=248 Identities=16% Similarity=0.084 Sum_probs=185.1
Q ss_pred ccCCChHHHHHHHHhCCccccccc----------------CCCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccc
Q 014730 2 IEKNDWPGVEDFVTNHPDALTAKI----------------VEPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTL 65 (419)
Q Consensus 2 ~~~g~~~~v~~ll~~~~~~~~~~~----------------~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~ 65 (419)
+..|+.++|+.|+++ +.+.+... .... .+.+|+|+ . .+..++++.|++.| .++
T Consensus 55 ~~~g~~~~v~~Ll~~-g~~~~~~~~~~a~~~~~~~~~~~~~~~~-~~~~~~a~-~------~~~~~~~~~l~~~g--~dv 123 (327)
T 1sw6_A 55 NDNEQKMKLEAFLQR-LLFPEIQEMPTSLNNDSSNRNSEGGSSN-QQQQHVSF-D------SLLQEVNDAFPNTQ--LNL 123 (327)
T ss_dssp CCHHHHHHHHHHHHH-HHC--------------------------------CH-H------HHHHHHHHHCTTSC--CCS
T ss_pred ccCchhHHHHHHHHh-ccCCccccchHhhhcccccccccccCCc-cchhHHHH-H------hhHHHHHHHHHhcC--CCc
Confidence 345889999999988 55543310 1111 23458888 8 88899999999999 999
Q ss_pred cc-cCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCchHHHHHHHcCC---HHHHHHHHhcC-CCCccccCCCC
Q 014730 66 AR-QDNHGHTAVIFCAAKGNLKALKVLLKYNPDLTNIRDSDGYLPVHNAAYYGH---KDTFQYLLEAT-NGVDIYRGNDG 140 (419)
Q Consensus 66 ~~-~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~---~~~~~~Ll~~g-~~~~~~~~~~g 140 (419)
|. +|..|.||||+||..|+.+++++|+++|++ ++.++..|.||||+|+..|+ .++++.|++.+ ++++. .+..|
T Consensus 124 n~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad-~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~-~d~~g 201 (327)
T 1sw6_A 124 NIPVDEHGNTPLHWLTSIANLELVKHLVKHGSN-RLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLIL-EDSMN 201 (327)
T ss_dssp CSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGE-ECTTC
T ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccC-CCCCC
Confidence 99 899999999999999999999999999999 79999999999999999998 68888888886 67888 99999
Q ss_pred CcHHHHHHH----cCcHHHHHHHHhhCCCCCcCCCCCCCcHHHHHHhCCCCCCCCCchhHHHHHHHhhhcccCCCCcccc
Q 014730 141 AMVLLFLIA----ANLYDVALDLLKLHPTIGRDNIDSRRIVLNTLSQKPYAFASGSRLGRLRRLIYNCWCQQSCIPLEKE 216 (419)
Q Consensus 141 ~t~l~~a~~----~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (419)
.||||+|+. .|+.+++++|++.+.... ..........+ .
T Consensus 202 ~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~-------------~~~~~~~i~~~-~----------------------- 244 (327)
T 1sw6_A 202 RTILHHIIITSGMTGCSAAAKYYLDILMGWI-------------VKKQNRPIQSG-T----------------------- 244 (327)
T ss_dssp CCHHHHHHHHHTSTTCHHHHHHHHHHHHHHH-------------HHGGGCCEEEC-------------------------
T ss_pred CCHHHHHHHHccccccHHHHHHHHHHHHHHH-------------hcccchHHHhh-h-----------------------
Confidence 999999999 899999999998764221 00000000000 0
Q ss_pred cccccccCCCCCCCCCCCccccccccCCCCCCCCCChhhHHHHHhhHHHHHHHHHHHHhhhcCchhHHHHHHhhhhHhHH
Q 014730 217 RVPSIQSNDDQNVDGDTENFTVTSKMHPKESTPFGSTQQITAIFGLMFHKLNRMLWNALMRLAPSIKVIHDQKLTHMRTV 296 (419)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (419)
T Consensus 245 -------------------------------------------------------------------------------- 244 (327)
T 1sw6_A 245 -------------------------------------------------------------------------------- 244 (327)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhhhhhccccchhhhhHHHHHHHHhChHHHHHHHHHhcCCccccccCCCCchHHHHHhhchHHHHHHHhhcccc
Q 014730 297 EIVRIICEGVVWTNFQKSAQLSGAMLSAAILGIPEVVNEFIMAYDSCSNWSNQDGHTIFDHAVLHRREKVFNLIQGVNFT 376 (419)
Q Consensus 297 ~~l~~l~~~~~~~~~~~~~~~~t~L~~A~~~g~~e~v~~Ll~~~~~d~~~~~~~g~t~Lh~Av~~~~~~iv~~L~~~~~~ 376 (419)
.+...-.+.....+ .||||.|+. +++|++. + ++.++..|+||||+|+++++.+++++|+++
T Consensus 245 ------~~~g~~~~~~~~~g-~t~L~~a~~------~~~Ll~~-~--~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~--- 305 (327)
T 1sw6_A 245 ------NEKESKPNDKNGER-KDSILENLD------LKWIIAN-M--LNAQDSNGDTCLNIAARLGNISIVDALLDY--- 305 (327)
T ss_dssp ----------------------CHHHHHCS------HHHHHHH-T--TTCCCTTSCCHHHHHHHHCCHHHHHHHHHT---
T ss_pred ------hcccCCcccccccC-CChhHHHHH------HHHHHHh-C--CCCCCCCCCCHHHHHHHcCCHHHHHHHHHc---
Confidence 00000001111112 789999996 8999987 4 777889999999999999999999999999
Q ss_pred cceeeeccCCCCccchhccccc
Q 014730 377 TFLFSSRDKSGNNILHLAGRLV 398 (419)
Q Consensus 377 ~~~~~~~D~~G~t~Lh~A~~~~ 398 (419)
+.+++.+|.+|+||||+||+.|
T Consensus 306 Gad~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 306 GADPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp TCCTTCCCTTSCCGGGGTCC--
T ss_pred CCCCcccCCCCCCHHHHHHhcC
Confidence 6788999999999999999875
No 39
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=1.7e-32 Score=231.57 Aligned_cols=153 Identities=25% Similarity=0.331 Sum_probs=144.7
Q ss_pred CccCCChHHHHHHHHhCCcccccccCCCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHH
Q 014730 1 MIEKNDWPGVEDFVTNHPDALTAKIVEPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCA 80 (419)
Q Consensus 1 A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~ 80 (419)
||+.|+.++|+.|+++ |.++|.+ |..| .||||+|+ . .++.+++++|++.| ++++.+|..|.||||+|+
T Consensus 11 Aa~~G~~~~v~~Ll~~-Gadvn~~-d~~g-~t~l~~a~-~------~~~~~~~~~ll~~g--ad~~~~d~~g~TpLh~A~ 78 (169)
T 4gpm_A 11 AAENGNKDRVKDLIEN-GADVNAS-DSDG-RTPLHHAA-E------NGHKEVVKLLISKG--ADVNAKDSDGRTPLHHAA 78 (169)
T ss_dssp HHHTTCHHHHHHHHHT-TCCTTCC-CTTS-CCHHHHHH-H------TTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHH
T ss_pred HHHcCCHHHHHHHHHC-CCCCCCc-CCCC-CCHHHHHH-H------cCCHHHHHHHHhcc--cchhhhccCCCCHHHHHH
Confidence 6889999999999988 8999999 9999 99999999 9 99999999999999 999999999999999999
Q ss_pred HcCCHHHHHHHHhcCCCCCccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHHHcCcHHHHHHHH
Q 014730 81 AKGNLKALKVLLKYNPDLTNIRDSDGYLPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLIAANLYDVALDLL 160 (419)
Q Consensus 81 ~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll 160 (419)
..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|+++|++++. ++..|.|||++|+..|+.+++++|+
T Consensus 79 ~~g~~~~v~~Ll~~gad-vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~-~d~~G~TpL~~A~~~g~~~iv~~Ll 156 (169)
T 4gpm_A 79 ENGHKEVVKLLISKGAD-VNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNT-SDSDGRTPLDLAREHGNEEVVKLLE 156 (169)
T ss_dssp HTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HcCCHHHHHHHHHCcCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc-cCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 99999999999999999 899999999999999999999999999999999999 9999999999999999999999999
Q ss_pred hhCCCCC
Q 014730 161 KLHPTIG 167 (419)
Q Consensus 161 ~~~~~~~ 167 (419)
++|+++.
T Consensus 157 ~~GA~ie 163 (169)
T 4gpm_A 157 KQGGWLE 163 (169)
T ss_dssp TC-----
T ss_pred HCCCCcC
Confidence 9999875
No 40
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=1.1e-31 Score=233.52 Aligned_cols=198 Identities=16% Similarity=0.129 Sum_probs=175.5
Q ss_pred CCCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCC
Q 014730 26 VEPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCAAKGNLKALKVLLKYNPDLTNIRDSD 105 (419)
Q Consensus 26 ~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~ 105 (419)
+..+ .||||.|+ . .|+.+.++.|+..+ +.+++..|..|.||||+|+..|+.+++++|+++|++ ++.++..
T Consensus 2 ~~~~-~~~L~~A~-~------~g~~~~v~~ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~ 71 (201)
T 3hra_A 2 KTYE-VGALLEAA-N------QRDTKKVKEILQDT-TYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGAD-INLQNSI 71 (201)
T ss_dssp -CCC-TTHHHHHH-H------TTCHHHHHHHHTCT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTT
T ss_pred Cccc-ccHHHHHH-H------hccHHHHHHHHHcC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCC
Confidence 4567 99999999 9 99999999999998 448999999999999999999999999999999999 7999999
Q ss_pred CchHHHHHHHcCCHHHHHHHH-hcCCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhhC-CCCCcCCCCCCCcHHHHHHh
Q 014730 106 GYLPVHNAAYYGHKDTFQYLL-EATNGVDIYRGNDGAMVLLFLIAANLYDVALDLLKLH-PTIGRDNIDSRRIVLNTLSQ 183 (419)
Q Consensus 106 g~t~L~~A~~~g~~~~~~~Ll-~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~-~~~~~~~~~~g~~~l~~a~~ 183 (419)
|.||||+|+..|+.+++++|+ ..+++++. .+..|.||||.|+..|+.+++++|++.| .++. .+|..|.||||+|+.
T Consensus 72 g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~~g~t~L~~A~~ 149 (201)
T 3hra_A 72 SDSPYLYAGAQGRTEILAYMLKHATPDLNK-HNRYGGNALIPAAEKGHIDNVKLLLEDGREDID-FQNDFGYTALIEAVG 149 (201)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHSCCCTTC-CCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTT-CCCTTSCCHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHhccCccccc-ccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcC-CCCCCCCCHHHHHHH
Confidence 999999999999999999999 55668888 8999999999999999999999999998 5555 677777777777765
Q ss_pred CCCCCCCCCchhHHHHHHHhhhcccCCCCcccccccccccCCCCCCCCCCCccccccccCCCCCCCCCChhhHHHHHhhH
Q 014730 184 KPYAFASGSRLGRLRRLIYNCWCQQSCIPLEKERVPSIQSNDDQNVDGDTENFTVTSKMHPKESTPFGSTQQITAIFGLM 263 (419)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (419)
.+...
T Consensus 150 ~~~~~--------------------------------------------------------------------------- 154 (201)
T 3hra_A 150 LREGN--------------------------------------------------------------------------- 154 (201)
T ss_dssp SSCCS---------------------------------------------------------------------------
T ss_pred hccch---------------------------------------------------------------------------
Confidence 42100
Q ss_pred HHHHHHHHHHHhhhcCchhHHHHHHhhhhHhHHHHHHHHHhhhhhccccchhhhhHHHHHHHHhChHHHHHHHHHhcCCc
Q 014730 264 FHKLNRMLWNALMRLAPSIKVIHDQKLTHMRTVEIVRIICEGVVWTNFQKSAQLSGAMLSAAILGIPEVVNEFIMAYDSC 343 (419)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~t~L~~A~~~g~~e~v~~Ll~~~~~d 343 (419)
.++.+++++|++. |++
T Consensus 155 ---------------------------------------------------------------~~~~~~v~~Ll~~-ga~ 170 (201)
T 3hra_A 155 ---------------------------------------------------------------QLYQDIVKLLMEN-GAD 170 (201)
T ss_dssp ---------------------------------------------------------------HHHHHHHHHHHHT-TCC
T ss_pred ---------------------------------------------------------------hhHHHHHHHHHHC-CCC
Confidence 0137899999999 999
Q ss_pred cccccCCCCchHHHHHhhchHHHHHHHhhcc
Q 014730 344 SNWSNQDGHTIFDHAVLHRREKVFNLIQGVN 374 (419)
Q Consensus 344 ~~~~~~~g~t~Lh~Av~~~~~~iv~~L~~~~ 374 (419)
++.++..|+||||+|+.+++.+++++|+++|
T Consensus 171 ~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 171 QSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred CCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 9999999999999999999999999999874
No 41
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=3.8e-32 Score=242.87 Aligned_cols=219 Identities=15% Similarity=0.114 Sum_probs=190.3
Q ss_pred ccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHH
Q 014730 65 LARQDNHGHTAVIFCAAKGNLKALKVLLKYNPDLTNIRDSDGYLPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVL 144 (419)
Q Consensus 65 ~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l 144 (419)
++..|..|.|||+.|+..|+.+++++|++.|.+ ++.++..|.||||+|+..|+.+++++|++.|++++...+..|.|||
T Consensus 2 ~~~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L 80 (240)
T 3eu9_A 2 MTHIDDYSTWDIVKATQYGIYERCRELVEAGYD-VRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPL 80 (240)
T ss_dssp CCCCSCGGGCCHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHH
T ss_pred ccccccccchHHHHHHHcCChHHHHHHHHcCCC-cCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChh
Confidence 456788999999999999999999999999998 7899999999999999999999999999999988762456699999
Q ss_pred HHHHHcCcHHHHHHHHhhCCCCCcCCCCCCCcHHHHHHhCCCCCCCCCchhHHHHHHHhhhcccCCCCcccccccccccC
Q 014730 145 LFLIAANLYDVALDLLKLHPTIGRDNIDSRRIVLNTLSQKPYAFASGSRLGRLRRLIYNCWCQQSCIPLEKERVPSIQSN 224 (419)
Q Consensus 145 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (419)
|.|+..|+.+++++|++.|+++. ..+..|.||||+|+..+..
T Consensus 81 ~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~l~~A~~~~~~------------------------------------- 122 (240)
T 3eu9_A 81 HWATRQGHLSMVVQLMKYGADPS-LIDGEGCSCIHLAAQFGHT------------------------------------- 122 (240)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCH-------------------------------------
T ss_pred HHHHHcCCHHHHHHHHHcCCCCc-ccCCCCCCHHHHHHHcCHH-------------------------------------
Confidence 99999999999999999999987 7899999999999986421
Q ss_pred CCCCCCCCCCccccccccCCCCCCCCCChhhHHHHHhhHHHHHHHHHHHHhhhcCchhHHHHHHhhhhHhHHHHHHHHHh
Q 014730 225 DDQNVDGDTENFTVTSKMHPKESTPFGSTQQITAIFGLMFHKLNRMLWNALMRLAPSIKVIHDQKLTHMRTVEIVRIICE 304 (419)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 304 (419)
++++.+++
T Consensus 123 ------------------------------------------------------------------------~~~~~Ll~ 130 (240)
T 3eu9_A 123 ------------------------------------------------------------------------SIVAYLIA 130 (240)
T ss_dssp ------------------------------------------------------------------------HHHHHHHH
T ss_pred ------------------------------------------------------------------------HHHHHHHh
Confidence 23333344
Q ss_pred hhhhccccc--hhhhhHHHHHHHHhCh-HHHHHHHHHhcCCccccccC-CCCchHHHHHhhchHHHHHHHhhccccccee
Q 014730 305 GVVWTNFQK--SAQLSGAMLSAAILGI-PEVVNEFIMAYDSCSNWSNQ-DGHTIFDHAVLHRREKVFNLIQGVNFTTFLF 380 (419)
Q Consensus 305 ~~~~~~~~~--~~~~~t~L~~A~~~g~-~e~v~~Ll~~~~~d~~~~~~-~g~t~Lh~Av~~~~~~iv~~L~~~~~~~~~~ 380 (419)
... +++. ..+ .||||.|+..|+ .+++++|++. +++++..+. .|+||||+|+.+++.+++++|+++ +.++
T Consensus 131 ~~~--~~~~~~~~g-~t~l~~a~~~~~~~~~~~~L~~~-~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---g~~~ 203 (240)
T 3eu9_A 131 KGQ--DVDMMDQNG-MTPLMWAAYRTHSVDPTRLLLTF-NVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEA---GANV 203 (240)
T ss_dssp TTC--CTTCCCTTS-CCHHHHHHHHCCSSTTHHHHHHT-TCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHH---TCCT
T ss_pred cCC--CccccCCCC-CcHHHHHHHhCChHHHHHHHHhc-CCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHc---CCCC
Confidence 332 2222 222 799999997776 8999999999 999999995 999999999999999999999999 5778
Q ss_pred eeccCCCCccchhcccccCCC
Q 014730 381 SSRDKSGNNILHLAGRLVPSS 401 (419)
Q Consensus 381 ~~~D~~G~t~Lh~A~~~~~~~ 401 (419)
+.+|..|.||||+|++.|+.+
T Consensus 204 ~~~~~~g~t~l~~A~~~~~~~ 224 (240)
T 3eu9_A 204 DAQNIKGESALDLAKQRKNVW 224 (240)
T ss_dssp TCBCTTSCBHHHHHHHTTCHH
T ss_pred CCcCCCCCCHHHHHHHcCcHH
Confidence 999999999999999998865
No 42
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=2.7e-32 Score=252.52 Aligned_cols=238 Identities=16% Similarity=0.146 Sum_probs=181.9
Q ss_pred CccCCChHHHHHHHHhCCcccccccCCCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHH
Q 014730 1 MIEKNDWPGVEDFVTNHPDALTAKIVEPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCA 80 (419)
Q Consensus 1 A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~ 80 (419)
||..|+.+.|+.|+++ +.++|.+ +..| .||||+|| . .|+.+++++|++.| ++++..|..|.||||+|+
T Consensus 47 A~~~g~~~~v~~Ll~~-g~~~~~~-~~~g-~t~L~~A~-~------~g~~~~v~~Ll~~g--a~~~~~~~~g~tpL~~A~ 114 (299)
T 1s70_B 47 ACSSGDTEEVLRLLER-GADINYA-NVDG-LTALHQAC-I------DDNVDMVKFLVENG--ANINQPDNEGWIPLHAAA 114 (299)
T ss_dssp HHHHTCHHHHHHHHHH-CCCTTCB-CTTC-CBHHHHHH-H------TTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHH
T ss_pred HHHcCCHHHHHHHHHc-CCCCccc-CCCC-CCHHHHHH-H------cCCHHHHHHHHHCC--CCCCCCCCCCCcHHHHHH
Confidence 6788999999999988 7889998 9999 99999999 9 99999999999999 999999999999999999
Q ss_pred HcCCHHHHHHHHhcCCCCCccCCCCCchHHHHHHHcCCHHHHHHHHhc-CCCCccccCCCCCcHHHHHHHcCcHHHHHHH
Q 014730 81 AKGNLKALKVLLKYNPDLTNIRDSDGYLPVHNAAYYGHKDTFQYLLEA-TNGVDIYRGNDGAMVLLFLIAANLYDVALDL 159 (419)
Q Consensus 81 ~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~-g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L 159 (419)
..|+.+++++|+++|++ ++.++..|.||||+|+..|+.+++++++.. |.+++. ....+.+++ ...+..+
T Consensus 115 ~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~-~~~~~~~~~--------~~~~~~~ 184 (299)
T 1s70_B 115 SCGYLDIAEYLISQGAH-VGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEA-ARKEEERIM--------LRDARQW 184 (299)
T ss_dssp HHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHH-HHHHHHHHH--------HHHHHHH
T ss_pred HcCCHHHHHHHHhCCCC-CCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchh-hhhhhhhHH--------HHHHHHH
Confidence 99999999999999999 799999999999999999999999988764 444433 222222222 1223334
Q ss_pred HhhCCCCCcCCCCCCCcHHHHHHhCCCCCCCCCchhHHHHHHHhhhcccCCCCcccccccccccCCCCCCCCCCCccccc
Q 014730 160 LKLHPTIGRDNIDSRRIVLNTLSQKPYAFASGSRLGRLRRLIYNCWCQQSCIPLEKERVPSIQSNDDQNVDGDTENFTVT 239 (419)
Q Consensus 160 l~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (419)
+..+.......+..|.||||+|+..+.
T Consensus 185 l~~~~~~~~~~~~~g~t~L~~A~~~g~----------------------------------------------------- 211 (299)
T 1s70_B 185 LNSGHINDVRHAKSGGTALHVAAAKGY----------------------------------------------------- 211 (299)
T ss_dssp HHHTCCCCCCCTTTCCCHHHHHHHHTC-----------------------------------------------------
T ss_pred HhccCcchhhhcCCCCCHHHHHHHCCc-----------------------------------------------------
Confidence 444444333455666666666665421
Q ss_pred cccCCCCCCCCCChhhHHHHHhhHHHHHHHHHHHHhhhcCchhHHHHHHhhhhHhHHHHHHHHHhhhhhccccch--hhh
Q 014730 240 SKMHPKESTPFGSTQQITAIFGLMFHKLNRMLWNALMRLAPSIKVIHDQKLTHMRTVEIVRIICEGVVWTNFQKS--AQL 317 (419)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~--~~~ 317 (419)
.++++.|++.+. +++.. .+
T Consensus 212 --------------------------------------------------------~~~v~~Ll~~g~--d~~~~d~~g- 232 (299)
T 1s70_B 212 --------------------------------------------------------TEVLKLLIQARY--DVNIKDYDG- 232 (299)
T ss_dssp --------------------------------------------------------HHHHHHHHTTTC--CTTCCCTTC-
T ss_pred --------------------------------------------------------HHHHHHHHHcCC--CCCCcCCCC-
Confidence 122223333332 22221 22
Q ss_pred hHHHHHHHHhChHHHHHHHHHhcCCccccccCCCCchHHHHHhhchHHHHHHHhhc
Q 014730 318 SGAMLSAAILGIPEVVNEFIMAYDSCSNWSNQDGHTIFDHAVLHRREKVFNLIQGV 373 (419)
Q Consensus 318 ~t~L~~A~~~g~~e~v~~Ll~~~~~d~~~~~~~g~t~Lh~Av~~~~~~iv~~L~~~ 373 (419)
.||||+|+..|+.++|++|++. |++++.++..|+||||+|++.....+.+++.+.
T Consensus 233 ~tpL~~A~~~~~~~~v~~Ll~~-gad~~~~d~~g~t~l~~A~~~~~~~l~~l~~~~ 287 (299)
T 1s70_B 233 WTPLHAAAHWGKEEACRILVEN-LCDMEAVNKVGQTAFDVADEDILGYLEELQKKQ 287 (299)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCTTTSCCSGGGHHHHHHHHHT
T ss_pred CcHHHHHHhcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999999999 999999999999999999876544444444443
No 43
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.98 E-value=3.1e-32 Score=250.61 Aligned_cols=166 Identities=16% Similarity=0.102 Sum_probs=154.4
Q ss_pred CccCCChHHHHHHHHhCCcccccccCCCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHH
Q 014730 1 MIEKNDWPGVEDFVTNHPDALTAKIVEPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCA 80 (419)
Q Consensus 1 A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~ 80 (419)
|+..|+.++|+.|++. +.+++.+ +| .||||+|+ . .|+.+++++|++.| ++++.+|..|.||||+|+
T Consensus 38 A~~~g~~~~v~~Ll~~-g~~~~~~---~g-~t~L~~A~-~------~g~~~~v~~Ll~~g--a~~~~~d~~g~t~L~~A~ 103 (285)
T 3kea_A 38 AIADNNVRLVCTLLNA-GALKNLL---EN-EFPLHQAA-T------LEDTKIVKILLFSG--LDDSQFDDKGNTALYYAV 103 (285)
T ss_dssp HHHTTCHHHHHHHHHT-TGGGSCC---TT-CCHHHHHT-T------SSSCHHHHHHHHTT--CCTTCCCTTSCCHHHHHH
T ss_pred HHHcCCHHHHHHHHhC-CCCCCCC---CC-CCHHHHHH-H------cCCHHHHHHHHHCC--CCCCCcCCCCCcHHHHHH
Confidence 6789999999999988 7888776 48 99999999 9 99999999999999 999999999999999999
Q ss_pred HcCCHHHHHHHHhcCCCCCccCCCCC-chHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHHHcCcHHHHHHH
Q 014730 81 AKGNLKALKVLLKYNPDLTNIRDSDG-YLPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLIAANLYDVALDL 159 (419)
Q Consensus 81 ~~g~~~~~~~Ll~~~~~~~~~~~~~g-~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L 159 (419)
..|+.+++++|+++|++ ++.++..| .||||+|+..|+.+++++|+++|++... ...|.||||+|+..|+.+++++|
T Consensus 104 ~~g~~~~v~~Ll~~ga~-~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~~g~t~L~~A~~~g~~~~v~~L 180 (285)
T 3kea_A 104 DSGNMQTVKLFVKKNWR-LMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFD--LAILLSCIHITIKNGHVDMMILL 180 (285)
T ss_dssp HTTCHHHHHHHHHHCGG-GGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCC--CSTHHHHHHHHHHTTCHHHHHHH
T ss_pred HcCCHHHHHHHHhcCCC-CCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCcccc--ccCCccHHHHHHHcChHHHHHHH
Confidence 99999999999999999 79999999 8999999999999999999999987633 23899999999999999999999
Q ss_pred HhhCCCCCcCCCCCCCcH-HHHHHhC
Q 014730 160 LKLHPTIGRDNIDSRRIV-LNTLSQK 184 (419)
Q Consensus 160 l~~~~~~~~~~~~~g~~~-l~~a~~~ 184 (419)
+++|+++. .+|..|.|| ||+|+..
T Consensus 181 l~~gad~n-~~~~~g~t~~L~~A~~~ 205 (285)
T 3kea_A 181 LDYMTSTN-TNNSLLFIPDIKLAIDN 205 (285)
T ss_dssp HHHHHHTC-TTCCCBCCTTHHHHHHH
T ss_pred HHcCCCCC-cccCCCCChHHHHHHHc
Confidence 99999987 899999998 9999875
No 44
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=8.1e-32 Score=243.78 Aligned_cols=142 Identities=18% Similarity=0.214 Sum_probs=129.0
Q ss_pred CCccHHHHHHHhhcccCCCchHH----HHHHHHhhCCCccccc----cCCCCChHHHHHHHc---CCHHHHHHHHhcCCC
Q 014730 29 GSKTIFHTIAELLVDDDSDEATC----LLDKLATKVDPQTLAR----QDNHGHTAVIFCAAK---GNLKALKVLLKYNPD 97 (419)
Q Consensus 29 g~~t~L~~A~~~~~~~~~~g~~~----~v~~Ll~~~~~~~~~~----~~~~g~t~L~~A~~~---g~~~~~~~Ll~~~~~ 97 (419)
| +||||.|+ . .|+.+ ++++|++.| .+++. .|..|.||||+|+.. |+.+++++|+++|++
T Consensus 2 G-~t~L~~A~-~------~g~~~~v~~ll~~l~~~g--~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~ 71 (256)
T 2etb_A 2 D-RDRLFSVV-S------RGVPEELTGLLEYLRWNS--KYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKD 71 (256)
T ss_dssp C-HHHHHHHH-H------HTCGGGGTTHHHHHHHHT--CCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHH
T ss_pred C-ccHHHHHH-H------cCCHHHHHHHHHHHHHcC--CCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCc
Confidence 6 99999999 9 99997 678888899 88998 899999999999999 999999999999876
Q ss_pred CCc-----------cCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccCCC-------------CCcHHHHHHHcCcH
Q 014730 98 LTN-----------IRDSDGYLPVHNAAYYGHKDTFQYLLEATNGVDIYRGND-------------GAMVLLFLIAANLY 153 (419)
Q Consensus 98 ~~~-----------~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~-------------g~t~l~~a~~~~~~ 153 (419)
++ .++..|.||||+|+..|+.+++++|+++|++++. .+.. |.||||+|+..|+.
T Consensus 72 -~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~ 149 (256)
T 2etb_A 72 -SGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHL-RACGRFFQKHQGTCFYFGELPLSLAACTKQW 149 (256)
T ss_dssp -TTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCCSGGGSCCSSSCCCSCSSHHHHHHHTTCH
T ss_pred -ccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCc-ccccccccccccccccCCCCHHHHHHHcCCH
Confidence 33 2346799999999999999999999999999998 7765 99999999999999
Q ss_pred HHHHHHHh---hCCCCCcCCCCCCCcHHHHHHh
Q 014730 154 DVALDLLK---LHPTIGRDNIDSRRIVLNTLSQ 183 (419)
Q Consensus 154 ~~~~~Ll~---~~~~~~~~~~~~g~~~l~~a~~ 183 (419)
+++++|++ .|+++. .+|..|.||||+|+.
T Consensus 150 ~~v~~Ll~~~~~ga~~n-~~d~~g~TpLh~A~~ 181 (256)
T 2etb_A 150 DVVTYLLENPHQPASLE-ATDSLGNTVLHALVM 181 (256)
T ss_dssp HHHHHHHHCSSCCCCTT-CCCTTSCCHHHHHHH
T ss_pred HHHHHHHhccccCCCcC-ccCCCCCCHHHHHHH
Confidence 99999999 899887 788899999998887
No 45
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.97 E-value=3.2e-31 Score=242.25 Aligned_cols=153 Identities=16% Similarity=0.132 Sum_probs=128.8
Q ss_pred cccccCCCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCC--Ccccc----ccCCCCChHHHHHHHc---CCHHHHHHH
Q 014730 21 LTAKIVEPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVD--PQTLA----RQDNHGHTAVIFCAAK---GNLKALKVL 91 (419)
Q Consensus 21 ~~~~~~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~--~~~~~----~~~~~g~t~L~~A~~~---g~~~~~~~L 91 (419)
.+.. +..| .||||.|| . .|+.++|+.|++.+. +.+++ ..|..|.||||+|+.. |+.+++++|
T Consensus 6 ~~~~-d~~g-~t~L~~A~-~------~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~L 76 (273)
T 2pnn_A 6 EKPP-RLYD-RRSIFDAV-A------QSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALL 76 (273)
T ss_dssp ------CCC-HHHHHHHH-H------TTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHH
T ss_pred CCCC-Cccc-chHHHHHH-H------cCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHH
Confidence 3344 8889 99999999 9 999999998887530 14444 3578999999999987 999999999
Q ss_pred HhcCCCC----------CccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccCC--------------CCCcHHHHH
Q 014730 92 LKYNPDL----------TNIRDSDGYLPVHNAAYYGHKDTFQYLLEATNGVDIYRGN--------------DGAMVLLFL 147 (419)
Q Consensus 92 l~~~~~~----------~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~--------------~g~t~l~~a 147 (419)
+++|++. ....+..|.||||+|+..|+.+++++|+++|++++. .+. .|.||||+|
T Consensus 77 l~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~-~~~~~~~~~~~~~~~~~~g~tpL~~A 155 (273)
T 2pnn_A 77 LDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQA-AANGDFFKKTKGRPGFYFGELPLSLA 155 (273)
T ss_dssp HHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBCSGGGSSCSSSCCCCSCBSHHHHH
T ss_pred HHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCc-cccccccccccccccccCCCCHHHHH
Confidence 9997541 122567899999999999999999999999999998 765 799999999
Q ss_pred HHcCcHHHHHHHHh---hCCCCCcCCCCCCCcHHHHHHhC
Q 014730 148 IAANLYDVALDLLK---LHPTIGRDNIDSRRIVLNTLSQK 184 (419)
Q Consensus 148 ~~~~~~~~~~~Ll~---~~~~~~~~~~~~g~~~l~~a~~~ 184 (419)
+..|+.+++++|++ .|+++. .+|..|.||||+|+..
T Consensus 156 ~~~g~~~~v~~Ll~~~~~gad~~-~~d~~g~tpLh~A~~~ 194 (273)
T 2pnn_A 156 ACTNQLAIVKFLLQNSWQPADIS-ARDSVGNTVLHALVEV 194 (273)
T ss_dssp HHTTCHHHHHHHHHCSSCCCCTT-CCCTTSCCHHHHHHHH
T ss_pred HHcCCHHHHHHHHhcccCCCCce-eeCCCCCcHHHHHHHc
Confidence 99999999999999 889887 8899999999998875
No 46
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=7.5e-30 Score=215.36 Aligned_cols=141 Identities=22% Similarity=0.305 Sum_probs=130.7
Q ss_pred cHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCchHHH
Q 014730 32 TIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCAAKGNLKALKVLLKYNPDLTNIRDSDGYLPVH 111 (419)
Q Consensus 32 t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~L~ 111 (419)
++|+.|| . .|+.++|+.|++.| +++|.+|..|.||||+|+..++.+++++|+++|++ ++.++..|.||||
T Consensus 6 ~~L~~Aa-~------~G~~~~v~~Ll~~G--advn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad-~~~~d~~g~TpLh 75 (169)
T 4gpm_A 6 KRLIEAA-E------NGNKDRVKDLIENG--ADVNASDSDGRTPLHHAAENGHKEVVKLLISKGAD-VNAKDSDGRTPLH 75 (169)
T ss_dssp HHHHHHH-H------TTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHH
T ss_pred HHHHHHH-H------cCCHHHHHHHHHCC--CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccc-hhhhccCCCCHHH
Confidence 5789999 9 99999999999999 99999999999999999999999999999999999 7999999999999
Q ss_pred HHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhhCCCCCcCCCCCCCcHHHHHHhC
Q 014730 112 NAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLIAANLYDVALDLLKLHPTIGRDNIDSRRIVLNTLSQK 184 (419)
Q Consensus 112 ~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~ 184 (419)
+|+..|+.+++++|+++|++++. ++..|+||||+|+..|+.+++++|++.|+++. .+|..|.|||++|+..
T Consensus 76 ~A~~~g~~~~v~~Ll~~gadvn~-~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~-~~d~~G~TpL~~A~~~ 146 (169)
T 4gpm_A 76 HAAENGHKEVVKLLISKGADVNA-KDSDGRTPLHHAAENGHKEVVKLLISKGADVN-TSDSDGRTPLDLAREH 146 (169)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHCcCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-ccCCCCCCHHHHHHHc
Confidence 99999999999999999999999 99999999999999999999999999999877 5666666555555543
No 47
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.97 E-value=9e-30 Score=226.73 Aligned_cols=173 Identities=18% Similarity=0.151 Sum_probs=160.3
Q ss_pred CccCCChHHHHHHHHhCCcccccccCCCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccc-----cccCCCCChH
Q 014730 1 MIEKNDWPGVEDFVTNHPDALTAKIVEPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTL-----ARQDNHGHTA 75 (419)
Q Consensus 1 A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~-----~~~~~~g~t~ 75 (419)
|++.|+.++|+.|++..+.+++.+ +..| .||||+|+ . .|+.+++++|++.| .++ +..|..|.||
T Consensus 10 A~~~g~~~~v~~Ll~~~g~~~~~~-~~~g-~t~L~~A~-~------~g~~~~v~~Ll~~~--~~~~~~~~~~~~~~g~t~ 78 (232)
T 2rfa_A 10 AAKENDVQALSKLLKFEGCEVHQR-GAMG-ETALHIAA-L------YDNLEAAMVLMEAA--PELVFEPMTSELYEGQTA 78 (232)
T ss_dssp HHHTTCHHHHHHHHTTTCSCTTCC-CTTS-CCHHHHHH-H------TTCHHHHHHHHHHC--GGGGGCCCCSTTTTTCCH
T ss_pred HHHcCCHHHHHHHHHhcCCCcccC-CCCC-CCHHHHHH-H------cCCHHHHHHHHHcC--chhccccccccCCCCcCH
Confidence 678999999999999889999999 9999 99999999 9 99999999999999 665 6677899999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCccCCC-------------CCchHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCc
Q 014730 76 VIFCAAKGNLKALKVLLKYNPDLTNIRDS-------------DGYLPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAM 142 (419)
Q Consensus 76 L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~-------------~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t 142 (419)
||+|+..|+.+++++|+++|++ ++.++. .|.||||+|+..|+.+++++|+++|++++. .+..|.|
T Consensus 79 L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~d~~g~t 156 (232)
T 2rfa_A 79 LHIAVINQNVNLVRALLARGAS-VSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRA-QDSLGNT 156 (232)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCC-TTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCC
T ss_pred HHHHHHcCCHHHHHHHHhCCCC-CCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCC
Confidence 9999999999999999999998 677655 799999999999999999999999999999 9999999
Q ss_pred HHHHHHHcCcHHHH----HHHHhhCCCCC-----cCCCCCCCcHHHHHHhCCC
Q 014730 143 VLLFLIAANLYDVA----LDLLKLHPTIG-----RDNIDSRRIVLNTLSQKPY 186 (419)
Q Consensus 143 ~l~~a~~~~~~~~~----~~Ll~~~~~~~-----~~~~~~g~~~l~~a~~~~~ 186 (419)
|||+|+..++.+++ ++|++.|++.. +.+|..|.||||+|+..+.
T Consensus 157 ~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~ 209 (232)
T 2rfa_A 157 VLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGN 209 (232)
T ss_dssp HHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTC
T ss_pred HHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCC
Confidence 99999999999988 99999998763 4789999999999998753
No 48
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.97 E-value=3.1e-30 Score=233.87 Aligned_cols=147 Identities=17% Similarity=0.127 Sum_probs=128.1
Q ss_pred CCCCCccHHHHHHHhhcccCCCchHHH----HHHHHhhCCCccccccC----CCCChHHHHHH---HcCCHHHHHHHHhc
Q 014730 26 VEPGSKTIFHTIAELLVDDDSDEATCL----LDKLATKVDPQTLARQD----NHGHTAVIFCA---AKGNLKALKVLLKY 94 (419)
Q Consensus 26 ~~~g~~t~L~~A~~~~~~~~~~g~~~~----v~~Ll~~~~~~~~~~~~----~~g~t~L~~A~---~~g~~~~~~~Ll~~ 94 (419)
+..| +|+||.|| . .|+.+. +++|++.| .+++..+ ..|.||||+|+ ..|+.+++++|++.
T Consensus 2 ~~~~-~~~L~~A~-~------~g~~~~v~~ll~~l~~~~--~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~ 71 (260)
T 3jxi_A 2 KVFN-RPILFDIV-S------RGSPDGLEGLLSFLLTHK--KRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDI 71 (260)
T ss_dssp CCCC-HHHHHHHH-H------HTCGGGGTTHHHHHHHHT--CCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHH
T ss_pred ccch-HHHHHHHH-H------hCCHHHHHHHHHHHHhcC--CCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHh
Confidence 5678 99999999 9 999995 55555588 7777665 77999999999 77999999999998
Q ss_pred CCCC----------CccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccC--------------CCCCcHHHHHHHc
Q 014730 95 NPDL----------TNIRDSDGYLPVHNAAYYGHKDTFQYLLEATNGVDIYRG--------------NDGAMVLLFLIAA 150 (419)
Q Consensus 95 ~~~~----------~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~--------------~~g~t~l~~a~~~ 150 (419)
|++. .+..+..|.||||+|+..|+.+++++|+++|++++. .+ ..|.||||+|+..
T Consensus 72 g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~~~~~~~~~~~~~~~~~~g~tpL~~A~~~ 150 (260)
T 3jxi_A 72 AEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHA-QARGRFFQPKDEGGYFYFGELPLSLAACT 150 (260)
T ss_dssp HHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCEECCCSSSCCCCSCCSCSSHHHHHHHT
T ss_pred cccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCc-cccccccCcccccccccCCCCHHHHHHHc
Confidence 7431 344455899999999999999999999999999998 77 6899999999999
Q ss_pred CcHHHHHHHHh---hCCCCCcCCCCCCCcHHHHHHhC
Q 014730 151 NLYDVALDLLK---LHPTIGRDNIDSRRIVLNTLSQK 184 (419)
Q Consensus 151 ~~~~~~~~Ll~---~~~~~~~~~~~~g~~~l~~a~~~ 184 (419)
|+.+++++|++ .|+++. .+|..|.||||+|+..
T Consensus 151 g~~~~v~~Ll~~~~~ga~~~-~~d~~g~TpLh~A~~~ 186 (260)
T 3jxi_A 151 NQPHIVHYLTENGHKQADLR-RQDSRGNTVLHALVAI 186 (260)
T ss_dssp TCHHHHHHHHHCSSCCCCTT-CCCTTSCCHHHHHHHH
T ss_pred CCHHHHHHHHhccccCCCCc-ccCCCCCcHHHHHHHh
Confidence 99999999999 888887 8899999999999864
No 49
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.97 E-value=1.1e-30 Score=233.25 Aligned_cols=170 Identities=14% Similarity=0.107 Sum_probs=149.4
Q ss_pred CccCCChHHHHHHHHhCCc---ccccccCCCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHH
Q 014730 1 MIEKNDWPGVEDFVTNHPD---ALTAKIVEPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVI 77 (419)
Q Consensus 1 A~~~g~~~~v~~ll~~~~~---~~~~~~~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~ 77 (419)
|+..|+.++++.|++.... +++.+ +..| .||||+|+ . .|+.+++++|++.| ++++..|..|.||||
T Consensus 15 A~~~g~~~~v~~Ll~~~~~~~~~~~~~-~~~g-~t~L~~A~-~------~~~~~~v~~Ll~~g--~~~~~~~~~g~t~L~ 83 (236)
T 1ikn_D 15 AIIHEEKALTMEVIRQVKGDLAFLNFQ-NNLQ-QTPLHLAV-I------TNQPEIAEALLGAG--CDPELRDFRGNTPLH 83 (236)
T ss_dssp HHHTTCSSSSSCCCC-----CCCCCCC-CTTC-CCHHHHHH-H------TTCHHHHHCCCSCC--CCSCCCCTTCCCHHH
T ss_pred HHHcCChhHHHHHHHHhhccHHHhhcc-CCCC-CCHHHHHH-H------cCCHHHHHHHHHcC--CCCCCcCCCCCCHHH
Confidence 6788999999999987433 68888 9999 99999999 9 99999999999999 999999999999999
Q ss_pred HHHHcCCHHHHHHHHhcCCC-----CCccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccCC-CCCcHHHHHHHcC
Q 014730 78 FCAAKGNLKALKVLLKYNPD-----LTNIRDSDGYLPVHNAAYYGHKDTFQYLLEATNGVDIYRGN-DGAMVLLFLIAAN 151 (419)
Q Consensus 78 ~A~~~g~~~~~~~Ll~~~~~-----~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~-~g~t~l~~a~~~~ 151 (419)
+|+..|+.+++++|++++++ .++..+..|.||||+|+..|+.+++++|+++|++++. .+. .|.||||+|+..|
T Consensus 84 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~~g~tpL~~A~~~~ 162 (236)
T 1ikn_D 84 LACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNA-QEPCNGRTALHLAVDLQ 162 (236)
T ss_dssp HHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTC-CCTTTCCCHHHHHHHTT
T ss_pred HHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCCCCHHHHHHHcC
Confidence 99999999999999999864 2467788899999999999999999999999999999 887 9999999999999
Q ss_pred cHHHHHHHHhhCCCCCcCCCCCCCcHHHHHHh
Q 014730 152 LYDVALDLLKLHPTIGRDNIDSRRIVLNTLSQ 183 (419)
Q Consensus 152 ~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~ 183 (419)
+.+++++|++.|+++. .+|..|.|||++|+.
T Consensus 163 ~~~~v~~Ll~~ga~~~-~~~~~g~tpl~~A~~ 193 (236)
T 1ikn_D 163 NPDLVSLLLKCGADVN-RVTYQGYSPYQLTWG 193 (236)
T ss_dssp CHHHHHHHHTTTCCSC-CCCTTCCCGGGGCTT
T ss_pred CHHHHHHHHHcCCCCC-cccCCCCCHHHHHHc
Confidence 9999999999998876 555555555554443
No 50
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.97 E-value=1.5e-29 Score=220.14 Aligned_cols=173 Identities=18% Similarity=0.206 Sum_probs=162.3
Q ss_pred CccCCChHHHHHHHHhCCcccccccCCCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHH
Q 014730 1 MIEKNDWPGVEDFVTNHPDALTAKIVEPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCA 80 (419)
Q Consensus 1 A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~ 80 (419)
|+..|+.+.++.++.+.+.+++.+ +..| .||||+|+ . .|+.+++++|++.| ++++..+..|.||||+|+
T Consensus 12 A~~~g~~~~v~~ll~~~~~~~~~~-~~~g-~t~L~~A~-~------~~~~~~v~~Ll~~g--~~~~~~~~~g~t~l~~A~ 80 (201)
T 3hra_A 12 AANQRDTKKVKEILQDTTYQVDEV-DTEG-NTPLNIAV-H------NNDIEIAKALIDRG--ADINLQNSISDSPYLYAG 80 (201)
T ss_dssp HHHTTCHHHHHHHHTCTTCCTTCC-CTTS-CCHHHHHH-H------HTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHH
T ss_pred HHHhccHHHHHHHHHcCCCCCCCC-CCCC-CCHHHHHH-H------cCCHHHHHHHHHcC--CCCCCCCCCCCCHHHHHH
Confidence 678999999999999988799999 9999 99999999 9 99999999999999 999999999999999999
Q ss_pred HcCCHHHHHHHHhcCCCCCccCCCCCchHHHHHHHcCCHHHHHHHHhcC-CCCccccCCCCCcHHHHHHHcCc-----HH
Q 014730 81 AKGNLKALKVLLKYNPDLTNIRDSDGYLPVHNAAYYGHKDTFQYLLEAT-NGVDIYRGNDGAMVLLFLIAANL-----YD 154 (419)
Q Consensus 81 ~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g-~~~~~~~~~~g~t~l~~a~~~~~-----~~ 154 (419)
..|+.+++++|++.+...++.++..|.||||+|+..|+.+++++|++.| ++++. .+..|.||||+|+..+. .+
T Consensus 81 ~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~~~g~t~L~~A~~~~~~~~~~~~ 159 (201)
T 3hra_A 81 AQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDF-QNDFGYTALIEAVGLREGNQLYQD 159 (201)
T ss_dssp HTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTC-CCTTSCCHHHHHHHSSCCSHHHHH
T ss_pred HcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCC-CCCCCCCHHHHHHHhccchhhHHH
Confidence 9999999999996654338899999999999999999999999999999 89999 99999999999999887 99
Q ss_pred HHHHHHhhCCCCCcCCCCCCCcHHHHHHhCCC
Q 014730 155 VALDLLKLHPTIGRDNIDSRRIVLNTLSQKPY 186 (419)
Q Consensus 155 ~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~~ 186 (419)
++++|++.|+++. .+|..|.||||+|+..+.
T Consensus 160 ~v~~Ll~~ga~~~-~~~~~g~t~l~~A~~~~~ 190 (201)
T 3hra_A 160 IVKLLMENGADQS-IKDNSGRTAMDYANQKGY 190 (201)
T ss_dssp HHHHHHHTTCCTT-CCCTTSCCHHHHHHHHTC
T ss_pred HHHHHHHCCCCCC-ccCCCCCCHHHHHHHcCC
Confidence 9999999999987 899999999999998653
No 51
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.96 E-value=2.7e-29 Score=212.98 Aligned_cols=163 Identities=13% Similarity=0.052 Sum_probs=148.2
Q ss_pred CccCCChHHHHHHHHhCCcccccccCCCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHH
Q 014730 1 MIEKNDWPGVEDFVTNHPDALTAKIVEPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCA 80 (419)
Q Consensus 1 A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~ 80 (419)
|+..|+.+.++.|++..+..++.+ +..| .||||+|+ . .|+.+++++|++.| .+++..|..|.||||+|+
T Consensus 9 A~~~g~~~~v~~ll~~~~~~~~~~-~~~g-~t~L~~A~-~------~~~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~ 77 (172)
T 3v30_A 9 LAAQGELDQLKEHLRKGDNLVNKP-DERG-FTPLIWAS-A------FGEIETVRFLLEWG--ADPHILAKERESALSLAS 77 (172)
T ss_dssp HHHTTCHHHHHHHHTTCSGGGGCC-CTTS-CCHHHHHH-H------TTCHHHHHHHHHHT--CCTTCCCTTCCCHHHHHH
T ss_pred HHHcCCHHHHHHHHHcCcccccCC-CCCC-CCHHHHHH-H------cCCHHHHHHHHHcC--CCchhhcccCCCHHHHHH
Confidence 678999999999999977778888 9999 99999999 9 99999999999999 899999999999999999
Q ss_pred HcCCHHHHHHHHhcCCCCCccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHHHcCcHHHHHHHH
Q 014730 81 AKGNLKALKVLLKYNPDLTNIRDSDGYLPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLIAANLYDVALDLL 160 (419)
Q Consensus 81 ~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll 160 (419)
..|+.+++++|+++|++ ++.++..|.||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|+
T Consensus 78 ~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~~g~t~l~~A~~~~~~~~~~~L~ 155 (172)
T 3v30_A 78 TGGYTDIVGLLLERDVD-INIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTT-EADSGYTPMDLAVALGYRKVQQVIE 155 (172)
T ss_dssp HTTCHHHHHHHHTTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred HCCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc-cCCCCCCHHHHHHHhCcHHHHHHHH
Confidence 99999999999999999 799999999999999999999999999999999999 9999999999999999999999999
Q ss_pred hhCCCCCcCCCCCCCcH
Q 014730 161 KLHPTIGRDNIDSRRIV 177 (419)
Q Consensus 161 ~~~~~~~~~~~~~g~~~ 177 (419)
+++++.. .++..|.||
T Consensus 156 ~~~~~~~-~~~~~~~~p 171 (172)
T 3v30_A 156 NHILKLF-QSNLVPADP 171 (172)
T ss_dssp HHHHHHS-CC-------
T ss_pred HHHHHHh-cccCCCCCC
Confidence 9998776 677777766
No 52
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.96 E-value=4.9e-30 Score=240.58 Aligned_cols=210 Identities=17% Similarity=0.130 Sum_probs=148.7
Q ss_pred hHHHHHHHHhCCccccc-ccCCCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHHHcCC-
Q 014730 7 WPGVEDFVTNHPDALTA-KIVEPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCAAKGN- 84 (419)
Q Consensus 7 ~~~v~~ll~~~~~~~~~-~~~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~~~g~- 84 (419)
.++++.|++. +.++|. + +..| .||||+|| . .|+.++|++|++.| ++++.+|..|.||||+|+..|+
T Consensus 110 ~~~~~~l~~~-g~dvn~~~-d~~g-~TpLh~Aa-~------~g~~~~v~~Ll~~G--ad~n~~d~~g~TpLh~A~~~g~~ 177 (327)
T 1sw6_A 110 QEVNDAFPNT-QLNLNIPV-DEHG-NTPLHWLT-S------IANLELVKHLVKHG--SNRLYGDNMGESCLVKAVKSVNN 177 (327)
T ss_dssp HHHHHHCTTS-CCCSCSCC-STTC-CCHHHHHH-H------TTCHHHHHHHHHTT--CCTTBCCTTCCCHHHHHHHSSHH
T ss_pred HHHHHHHHhc-CCCccccc-CCCC-CcHHHHHH-H------cCCHHHHHHHHHcC--CCCCCcCCCCCCHHHHHHHhccc
Confidence 3556666655 899999 7 9999 99999999 9 99999999999999 9999999999999999999998
Q ss_pred --HHHHHHHHhcCCCCCccCCCCCchHHHHHHH----cCCHHHHHHHHhcCCCCccccCCCCCcHHHHHHHcCcHHHHHH
Q 014730 85 --LKALKVLLKYNPDLTNIRDSDGYLPVHNAAY----YGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLIAANLYDVALD 158 (419)
Q Consensus 85 --~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~----~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ 158 (419)
.++++.|++++...++.++..|.||||+|+. .|+.+++++|++.++.... ... + ..+...
T Consensus 178 ~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~-~~~-~------------~~i~~~ 243 (327)
T 1sw6_A 178 YDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIV-KKQ-N------------RPIQSG 243 (327)
T ss_dssp HHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHH-HGG-G------------CCEEEC
T ss_pred ccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHh-ccc-c------------hHHHhh
Confidence 6788888888633378999999999999999 8999999999998542211 000 0 000011
Q ss_pred HHhhCCCCCcCCCCCCCcHHHHHHhCCCCCCCCCchhHHHHHHHhhhcccCCCCcccccccccccCCCCCCCCCCCcccc
Q 014730 159 LLKLHPTIGRDNIDSRRIVLNTLSQKPYAFASGSRLGRLRRLIYNCWCQQSCIPLEKERVPSIQSNDDQNVDGDTENFTV 238 (419)
Q Consensus 159 Ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (419)
+...|+++. .++..|.||||.|+. .+.+
T Consensus 244 ~~~~g~~~~-~~~~~g~t~L~~a~~-------------~~~L-------------------------------------- 271 (327)
T 1sw6_A 244 TNEKESKPN-DKNGERKDSILENLD-------------LKWI-------------------------------------- 271 (327)
T ss_dssp -----------------CHHHHHCS-------------HHHH--------------------------------------
T ss_pred hhcccCCcc-cccccCCChhHHHHH-------------HHHH--------------------------------------
Confidence 123355554 556666666665542 0000
Q ss_pred ccccCCCCCCCCCChhhHHHHHhhHHHHHHHHHHHHhhhcCchhHHHHHHhhhhHhHHHHHHHHHhhhhhccccchhhhh
Q 014730 239 TSKMHPKESTPFGSTQQITAIFGLMFHKLNRMLWNALMRLAPSIKVIHDQKLTHMRTVEIVRIICEGVVWTNFQKSAQLS 318 (419)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~ 318 (419)
++... +.....+ .
T Consensus 272 ----------------------------------------------------------------l~~~~--n~~d~~G-~ 284 (327)
T 1sw6_A 272 ----------------------------------------------------------------IANML--NAQDSNG-D 284 (327)
T ss_dssp ----------------------------------------------------------------HHHTT--TCCCTTS-C
T ss_pred ----------------------------------------------------------------HHhCC--CCCCCCC-C
Confidence 00000 2222223 7
Q ss_pred HHHHHHHHhChHHHHHHHHHhcCCccccccCCCCchHHHHHhhc
Q 014730 319 GAMLSAAILGIPEVVNEFIMAYDSCSNWSNQDGHTIFDHAVLHR 362 (419)
Q Consensus 319 t~L~~A~~~g~~e~v~~Ll~~~~~d~~~~~~~g~t~Lh~Av~~~ 362 (419)
||||+|+..|+.++|++||+. |+|++.++..|+||||+|+++|
T Consensus 285 TpLh~A~~~g~~~~v~~Ll~~-Gad~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 285 TCLNIAARLGNISIVDALLDY-GADPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp CHHHHHHHHCCHHHHHHHHHT-TCCTTCCCTTSCCGGGGTCC--
T ss_pred CHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCCHHHHHHhcC
Confidence 899999999999999999999 9999999999999999998764
No 53
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.96 E-value=2.6e-29 Score=229.52 Aligned_cols=154 Identities=19% Similarity=0.254 Sum_probs=135.9
Q ss_pred CccCCChHHHHHHHHh---CCcccc----cccCCCCCccHHHHHHHhhcccCCC---chHHHHHHHHhhCCCcc------
Q 014730 1 MIEKNDWPGVEDFVTN---HPDALT----AKIVEPGSKTIFHTIAELLVDDDSD---EATCLLDKLATKVDPQT------ 64 (419)
Q Consensus 1 A~~~g~~~~v~~ll~~---~~~~~~----~~~~~~g~~t~L~~A~~~~~~~~~~---g~~~~v~~Ll~~~~~~~------ 64 (419)
||+.|+.++|+.|++. .+.+++ .+ +..| .||||+|| . . |+.+++++|++.| ++
T Consensus 20 A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~-~~~g-~tpL~~A~-~------~~~~g~~~~v~~Ll~~g--a~~~~~~~ 88 (273)
T 2pnn_A 20 AVAQSNCQELESLLPFLQRSKKRLTDSEFKD-PETG-KTCLLKAM-L------NLHNGQNDTIALLLDVA--RKTDSLKQ 88 (273)
T ss_dssp HHHTTCSSTTTTHHHHHHHSCCCTTSGGGSC-TTTC-CCHHHHHH-H------SCBTTBCHHHHHHHHHH--HHTTCHHH
T ss_pred HHHcCCHHHHHHHHHHHhhcccccCCccccc-CcCC-CCHHHHHH-H------HHhcCChHHHHHHHHhh--ccccchhH
Confidence 6789999999999974 344443 34 7789 99999999 8 7 9999999999998 54
Q ss_pred -ccc----cCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCC--------------CCchHHHHHHHcCCHHHHHHH
Q 014730 65 -LAR----QDNHGHTAVIFCAAKGNLKALKVLLKYNPDLTNIRDS--------------DGYLPVHNAAYYGHKDTFQYL 125 (419)
Q Consensus 65 -~~~----~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~--------------~g~t~L~~A~~~g~~~~~~~L 125 (419)
++. .|..|.||||+|+..|+.+++++|+++|++ ++.++. .|.||||+|+..|+.+++++|
T Consensus 89 ~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~L 167 (273)
T 2pnn_A 89 FVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGAD-VQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFL 167 (273)
T ss_dssp HHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHH
T ss_pred HhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCC-cCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHH
Confidence 232 567899999999999999999999999999 788876 799999999999999999999
Q ss_pred Hh---cCCCCccccCCCCCcHHHHHHHcCc---------HHHHHHHHhhCCCCC
Q 014730 126 LE---ATNGVDIYRGNDGAMVLLFLIAANL---------YDVALDLLKLHPTIG 167 (419)
Q Consensus 126 l~---~g~~~~~~~~~~g~t~l~~a~~~~~---------~~~~~~Ll~~~~~~~ 167 (419)
++ .|++++. .+..|+||||+|+..|+ .+++++|++.|+++.
T Consensus 168 l~~~~~gad~~~-~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n 220 (273)
T 2pnn_A 168 LQNSWQPADISA-RDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLH 220 (273)
T ss_dssp HHCSSCCCCTTC-CCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HhcccCCCCcee-eCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcc
Confidence 99 9999999 99999999999999988 799999999887654
No 54
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.96 E-value=3.4e-29 Score=229.18 Aligned_cols=190 Identities=16% Similarity=0.213 Sum_probs=170.1
Q ss_pred ccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCchHH
Q 014730 31 KTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCAAKGNLKALKVLLKYNPDLTNIRDSDGYLPV 110 (419)
Q Consensus 31 ~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~L 110 (419)
.+++|.|+ . .|+.+.++.++..+.+..+|..|..|.||||+|+..|+.+++++|++.|+..++..+..|.|||
T Consensus 77 ~~~l~~a~-~------~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL 149 (276)
T 4hbd_A 77 RSDAHPEL-V------RRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPI 149 (276)
T ss_dssp STTCCHHH-H------HHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHH
T ss_pred ccCCCHHH-H------HHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHH
Confidence 67888888 8 9999999999988722238899999999999999999999999999999833899999999999
Q ss_pred HHHH-----HcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhhCCCCCcCCCCCCCcHHHHHHhCC
Q 014730 111 HNAA-----YYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLIAANLYDVALDLLKLHPTIGRDNIDSRRIVLNTLSQKP 185 (419)
Q Consensus 111 ~~A~-----~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~ 185 (419)
|+|+ ..++.+++++|++.|...+. .+..|.||||+|+..|+.+++++|++.|+++. .+|..|
T Consensus 150 ~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~-~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n-~~d~~G----------- 216 (276)
T 4hbd_A 150 MLTALATLKTQDDIETVLQLFRLGNINAK-ASQAGQTALMLAVSHGRVDVVKALLACEADVN-VQDDDG----------- 216 (276)
T ss_dssp HHGGGCCCCSHHHHHHHHHHHHHSCTTCC-CTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTS-----------
T ss_pred HHHHHHHhhhhhhHHHHHHHHHcCCCccc-cCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCC-CCCCCC-----------
Confidence 9999 66889999999999988888 88999999999999999999999999998765 332222
Q ss_pred CCCCCCCchhHHHHHHHhhhcccCCCCcccccccccccCCCCCCCCCCCccccccccCCCCCCCCCChhhHHHHHhhHHH
Q 014730 186 YAFASGSRLGRLRRLIYNCWCQQSCIPLEKERVPSIQSNDDQNVDGDTENFTVTSKMHPKESTPFGSTQQITAIFGLMFH 265 (419)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (419)
T Consensus 217 -------------------------------------------------------------------------------- 216 (276)
T 4hbd_A 217 -------------------------------------------------------------------------------- 216 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHhhhcCchhHHHHHHhhhhHhHHHHHHHHHhhhhhccccchhhhhHHHHHHHHhChHHHHHHHHH-hcCCcc
Q 014730 266 KLNRMLWNALMRLAPSIKVIHDQKLTHMRTVEIVRIICEGVVWTNFQKSAQLSGAMLSAAILGIPEVVNEFIM-AYDSCS 344 (419)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~t~L~~A~~~g~~e~v~~Ll~-~~~~d~ 344 (419)
.||||+|+..|+.++|++|++ . |+++
T Consensus 217 ----------------------------------------------------~TpLh~A~~~g~~~iv~~Ll~~~-gad~ 243 (276)
T 4hbd_A 217 ----------------------------------------------------STALMCACEHGHKEIAGLLLAVP-SCDI 243 (276)
T ss_dssp ----------------------------------------------------CCHHHHHHHHTCHHHHHHHHTST-TCCT
T ss_pred ----------------------------------------------------CCHHHHHHHCCCHHHHHHHHhcC-CCCC
Confidence 568888888899999999999 6 9999
Q ss_pred ccccCCCCchHHHHHhhchHHHHHHHhhc
Q 014730 345 NWSNQDGHTIFDHAVLHRREKVFNLIQGV 373 (419)
Q Consensus 345 ~~~~~~g~t~Lh~Av~~~~~~iv~~L~~~ 373 (419)
+.+|..|+||||+|+.+++.+++++|+++
T Consensus 244 ~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ 272 (276)
T 4hbd_A 244 SLTDRDGSTALMVALDAGQSEIASMLYSR 272 (276)
T ss_dssp TCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred cCcCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 99999999999999999999999999988
No 55
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.96 E-value=8.4e-30 Score=226.47 Aligned_cols=197 Identities=13% Similarity=0.064 Sum_probs=160.4
Q ss_pred HHHHHhhCCCcccc---ccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCchHHHHHHHcCCHHHHHHHHhcC
Q 014730 53 LDKLATKVDPQTLA---RQDNHGHTAVIFCAAKGNLKALKVLLKYNPDLTNIRDSDGYLPVHNAAYYGHKDTFQYLLEAT 129 (419)
Q Consensus 53 v~~Ll~~~~~~~~~---~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g 129 (419)
++.|+++| .+++ ..+..|.||||.|+..|+.+++++|++.|++ ++.++..|.||||+|+..|+.+++++|++.|
T Consensus 1 v~~ll~~~--~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g 77 (229)
T 2vge_A 1 MRSVLRKA--GSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMND-PSQPNEEGITALHNAICGANYSIVDFLITAG 77 (229)
T ss_dssp -----------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CeehhccC--CCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 46778888 5544 4456788899999999999999999999998 7999999999999999999999999999999
Q ss_pred CCCccccCCCCCcHHHHHHHcCcHHHHHHHHhhCCCCCcCCC-CCCCcHHHHHHhCCCCCCCCCchhHHHHHHHhhhccc
Q 014730 130 NGVDIYRGNDGAMVLLFLIAANLYDVALDLLKLHPTIGRDNI-DSRRIVLNTLSQKPYAFASGSRLGRLRRLIYNCWCQQ 208 (419)
Q Consensus 130 ~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~-~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (419)
++++. .+..|.||||+|+..|+.+++++|++.|+++. ..+ ..|.|
T Consensus 78 a~~n~-~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~-~~~~~~g~t-------------------------------- 123 (229)
T 2vge_A 78 ANVNS-PDSHGWTPLHCAASCNDTVICMALVQHGAAIF-ATTLSDGAT-------------------------------- 123 (229)
T ss_dssp CCTTC-CCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTT-CCCSSTTCC--------------------------------
T ss_pred CCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-cccCCCCCC--------------------------------
Confidence 99999 99999999999999999999999999998876 332 34444
Q ss_pred CCCCcccccccccccCCCCCCCCCCCccccccccCCCCCCCCCChhhHHHHHhhHHHHHHHHHHHHhhhcCchhHHHHHH
Q 014730 209 SCIPLEKERVPSIQSNDDQNVDGDTENFTVTSKMHPKESTPFGSTQQITAIFGLMFHKLNRMLWNALMRLAPSIKVIHDQ 288 (419)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (419)
T Consensus 124 -------------------------------------------------------------------------------- 123 (229)
T 2vge_A 124 -------------------------------------------------------------------------------- 123 (229)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhHhHHHHHHHHHhhhhhccccchhhhhHHHHHH--HHhChHHHHHHHHHhcCCccccccCCCCchHHHHHhhchHHH
Q 014730 289 KLTHMRTVEIVRIICEGVVWTNFQKSAQLSGAMLSA--AILGIPEVVNEFIMAYDSCSNWSNQDGHTIFDHAVLHRREKV 366 (419)
Q Consensus 289 ~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~t~L~~A--~~~g~~e~v~~Ll~~~~~d~~~~~~~g~t~Lh~Av~~~~~~i 366 (419)
|||+| +..|+.+++++|++. |++++..+..|.||++.+.....
T Consensus 124 -------------------------------pL~~A~a~~~~~~~~v~~Ll~~-ga~~~~~~~~~~~~l~~~~~~~~--- 168 (229)
T 2vge_A 124 -------------------------------AFEKCDPYREGYADCATYLADV-EQSMGLMNSGAVYALWDYSAEFG--- 168 (229)
T ss_dssp -------------------------------TGGGCCTTSTTHHHHHHHHHHH-HHHTTTSGGGEEEESSCBCCSST---
T ss_pred -------------------------------HHHHHHHHhcChHHHHHHHHHc-CCCcccccCCchHHHHHHhhccc---
Confidence 55555 566789999999999 99999999999999997665543
Q ss_pred HHHHhhcccccceeeeccCCCCccchhcccccCCCC
Q 014730 367 FNLIQGVNFTTFLFSSRDKSGNNILHLAGRLVPSSE 402 (419)
Q Consensus 367 v~~L~~~~~~~~~~~~~D~~G~t~Lh~A~~~~~~~~ 402 (419)
.++|++.+ ...+++.+|..|+||||+||+.|..++
T Consensus 169 ~~~ll~~g-a~~~~~~~d~~G~TpL~~A~~~g~~~~ 203 (229)
T 2vge_A 169 DELSFREG-ESVTVLRRDGPEETDWWWAALHGQEGY 203 (229)
T ss_dssp TBCCBCTT-CEEEEEESSCTTCSSEEEEEETTEEEE
T ss_pred cccCcccc-ccccccccCCCcccHHHHHHHcCCcce
Confidence 35666663 233478899999999999999998764
No 56
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.96 E-value=1e-28 Score=223.38 Aligned_cols=172 Identities=21% Similarity=0.236 Sum_probs=154.0
Q ss_pred CccCCChHHH----HHHHHhCCccccc----ccCCCCCccHHHHHHHhhcccCCC---chHHHHHHHHhhCCCccccc--
Q 014730 1 MIEKNDWPGV----EDFVTNHPDALTA----KIVEPGSKTIFHTIAELLVDDDSD---EATCLLDKLATKVDPQTLAR-- 67 (419)
Q Consensus 1 A~~~g~~~~v----~~ll~~~~~~~~~----~~~~~g~~t~L~~A~~~~~~~~~~---g~~~~v~~Ll~~~~~~~~~~-- 67 (419)
||+.|+.+.| +.|++. +.+++. + +..| .||||+|+ . . |+.+++++|++.| ++++.
T Consensus 9 A~~~g~~~~v~~ll~~l~~~-g~~i~~~~~~~-d~~g-~t~L~~A~-~------~~~~g~~~~v~~Ll~~g--~~~~~~~ 76 (256)
T 2etb_A 9 VVSRGVPEELTGLLEYLRWN-SKYLTDSAYTE-GSTG-KTCLMKAV-L------NLQDGVNACIMPLLQID--KDSGNPK 76 (256)
T ss_dssp HHHHTCGGGGTTHHHHHHHH-TCCTTSGGGSB-TTTT-BCHHHHHH-H------TCBTTBCTTHHHHHHHH--HHTTCSS
T ss_pred HHHcCCHHHHHHHHHHHHHc-CCCcccccccC-CCCC-CCHHHHHH-H------ccccchHHHHHHHHhcC--Ccccchh
Confidence 6788999754 555556 888888 7 9999 99999999 9 8 9999999999999 66553
Q ss_pred ---------cCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCC-------------CchHHHHHHHcCCHHHHHHH
Q 014730 68 ---------QDNHGHTAVIFCAAKGNLKALKVLLKYNPDLTNIRDSD-------------GYLPVHNAAYYGHKDTFQYL 125 (419)
Q Consensus 68 ---------~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~-------------g~t~L~~A~~~g~~~~~~~L 125 (419)
.|..|.||||+|+..|+.+++++|+++|++ ++.++.. |.||||+|+..|+.+++++|
T Consensus 77 ~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~L 155 (256)
T 2etb_A 77 PLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGAD-VHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYL 155 (256)
T ss_dssp CGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHH
T ss_pred hhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHH
Confidence 346799999999999999999999999999 7888876 99999999999999999999
Q ss_pred Hh---cCCCCccccCCCCCcHHHHHHH--cCcHH-------HHHHHHhhCCCCC------cCCCCCCCcHHHHHHhCCC
Q 014730 126 LE---ATNGVDIYRGNDGAMVLLFLIA--ANLYD-------VALDLLKLHPTIG------RDNIDSRRIVLNTLSQKPY 186 (419)
Q Consensus 126 l~---~g~~~~~~~~~~g~t~l~~a~~--~~~~~-------~~~~Ll~~~~~~~------~~~~~~g~~~l~~a~~~~~ 186 (419)
++ .|++++. .+..|+||||+|+. .++.+ ++++|++.|+++. +.+|..|.||||+|+..+.
T Consensus 156 l~~~~~ga~~n~-~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~ 233 (256)
T 2etb_A 156 LENPHQPASLEA-TDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGK 233 (256)
T ss_dssp HHCSSCCCCTTC-CCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTC
T ss_pred HhccccCCCcCc-cCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCC
Confidence 99 9999999 99999999999999 78888 9999999998872 3899999999999999764
No 57
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.96 E-value=3.9e-28 Score=205.29 Aligned_cols=143 Identities=20% Similarity=0.240 Sum_probs=85.7
Q ss_pred ccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCchHH
Q 014730 31 KTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCAAKGNLKALKVLLKYNPDLTNIRDSDGYLPV 110 (419)
Q Consensus 31 ~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~L 110 (419)
.++|+.|| . .|+.+++++|++.| .+++.+|..|.||||+|+..|+.+++++|+++|++ ++.++..|.|||
T Consensus 15 ~~~l~~A~-~------~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L 84 (169)
T 2y1l_E 15 GKKLLEAA-R------AGRDDEVRILMANG--ADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGAD-VNAVDHAGMTPL 84 (169)
T ss_dssp HHHHHHHH-H------HTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHH
T ss_pred cchHHHHH-H------cCCHHHHHHHHHCC--CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHH
Confidence 55666666 5 56666666666665 55555555666666666666666666666666555 455555566666
Q ss_pred HHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhhCCCCCcCCCCCCCcHHHHHHhCC
Q 014730 111 HNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLIAANLYDVALDLLKLHPTIGRDNIDSRRIVLNTLSQKP 185 (419)
Q Consensus 111 ~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~ 185 (419)
|+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|+++|+++. .+|..|.||+++|+..+
T Consensus 85 ~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~l~~A~~~~ 157 (169)
T 2y1l_E 85 RLAALFGHLEIVEVLLKNGADVNA-NDMEGHTPLHLAAMFGHLEIVEVLLKNGADVN-AQDKFGKTAFDISIDNG 157 (169)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTT
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHhC
Confidence 666666666666666666665555 55556666666666666666666666655554 55555666666665543
No 58
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.96 E-value=7.2e-28 Score=204.19 Aligned_cols=170 Identities=21% Similarity=0.179 Sum_probs=146.0
Q ss_pred CChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHHHcC
Q 014730 72 GHTAVIFCAAKGNLKALKVLLKYNPDLTNIRDSDGYLPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLIAAN 151 (419)
Q Consensus 72 g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~ 151 (419)
+.||||.|+..|+.+++++|++.++..++.++..|.||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~ 80 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHI-LAKERESALSLASTGG 80 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTC-CCTTCCCHHHHHHHTT
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchh-hcccCCCHHHHHHHCC
Confidence 568999999999999999999999886788899999999999999999999999999999999 9999999999999999
Q ss_pred cHHHHHHHHhhCCCCCcCCCCCCCcHHHHHHhCCCCCCCCCchhHHHHHHHhhhcccCCCCcccccccccccCCCCCCCC
Q 014730 152 LYDVALDLLKLHPTIGRDNIDSRRIVLNTLSQKPYAFASGSRLGRLRRLIYNCWCQQSCIPLEKERVPSIQSNDDQNVDG 231 (419)
Q Consensus 152 ~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (419)
+.+++++|++.|+++. .+|..|
T Consensus 81 ~~~~v~~Ll~~g~~~~-~~~~~g--------------------------------------------------------- 102 (172)
T 3v30_A 81 YTDIVGLLLERDVDIN-IYDWNG--------------------------------------------------------- 102 (172)
T ss_dssp CHHHHHHHHTTTCCTT-CCCTTS---------------------------------------------------------
T ss_pred CHHHHHHHHHcCCCCC-CCCCCC---------------------------------------------------------
Confidence 9999999999987754 222221
Q ss_pred CCCccccccccCCCCCCCCCChhhHHHHHhhHHHHHHHHHHHHhhhcCchhHHHHHHhhhhHhHHHHHHHHHhhhhhccc
Q 014730 232 DTENFTVTSKMHPKESTPFGSTQQITAIFGLMFHKLNRMLWNALMRLAPSIKVIHDQKLTHMRTVEIVRIICEGVVWTNF 311 (419)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~ 311 (419)
T Consensus 103 -------------------------------------------------------------------------------- 102 (172)
T 3v30_A 103 -------------------------------------------------------------------------------- 102 (172)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cchhhhhHHHHHHHHhChHHHHHHHHHhcCCccccccCCCCchHHHHHhhchHHHHHHHhhcccccceeeeccCCCCcc
Q 014730 312 QKSAQLSGAMLSAAILGIPEVVNEFIMAYDSCSNWSNQDGHTIFDHAVLHRREKVFNLIQGVNFTTFLFSSRDKSGNNI 390 (419)
Q Consensus 312 ~~~~~~~t~L~~A~~~g~~e~v~~Ll~~~~~d~~~~~~~g~t~Lh~Av~~~~~~iv~~L~~~~~~~~~~~~~D~~G~t~ 390 (419)
.||||+|+..|+.++|++|++. |++++..+..|+||||+|+.+++.+++++|+++ ...+...+..|.||
T Consensus 103 ------~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~---~~~~~~~~~~~~~p 171 (172)
T 3v30_A 103 ------GTPLLYAVRGNHVKCVEALLAR-GADLTTEADSGYTPMDLAVALGYRKVQQVIENH---ILKLFQSNLVPADP 171 (172)
T ss_dssp ------CCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHH---HHHHSCC-------
T ss_pred ------CCHHHHHHHcCCHHHHHHHHHc-CCCccccCCCCCCHHHHHHHhCcHHHHHHHHHH---HHHHhcccCCCCCC
Confidence 5688888888999999999999 999999999999999999999999999999999 45566677777776
No 59
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.95 E-value=9.1e-28 Score=207.40 Aligned_cols=153 Identities=19% Similarity=0.199 Sum_probs=146.2
Q ss_pred ccccccCCCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCC
Q 014730 20 ALTAKIVEPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCAAKGNLKALKVLLKYNPDLT 99 (419)
Q Consensus 20 ~~~~~~~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~ 99 (419)
.+|.+ |..| .||||+|| . .|+.+++++|++.| .+++..|..|.||||+|+..|+.+++++|+++|++ +
T Consensus 27 ~~n~~-d~~g-~t~L~~A~-~------~g~~~~v~~Ll~~~--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~ 94 (192)
T 2rfm_A 27 LRNYR-DSYN-RTPLMVAC-M------LGMENAIDKLVENF--DKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSN-V 94 (192)
T ss_dssp HHTCC-CTTC-CCHHHHHH-H------HTCGGGHHHHHHHH--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC-T
T ss_pred HHhCc-CCCC-CCHHHHHH-H------cCCHHHHHHHHHhc--cccccccccCccHHHHHHHcCCHHHHHHHHHCCCC-C
Confidence 45677 9999 99999999 9 99999999999999 89999999999999999999999999999999999 7
Q ss_pred ccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhhCCCCCcCCCCCCCcHHH
Q 014730 100 NIRDSDGYLPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLIAANLYDVALDLLKLHPTIGRDNIDSRRIVLN 179 (419)
Q Consensus 100 ~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~ 179 (419)
+.++..|.||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|++.|+++. .+|..|.||++
T Consensus 95 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~t~l~ 172 (192)
T 2rfm_A 95 NTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVND-RNLEGETPLIVASKYGRSEIVKKLLELGADIS-ARDLTGLTAEA 172 (192)
T ss_dssp TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSC-CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT-CBCTTSCBHHH
T ss_pred CCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-CcCCCCCCHHH
Confidence 99999999999999999999999999999999999 99999999999999999999999999999987 89999999999
Q ss_pred HHHhCCC
Q 014730 180 TLSQKPY 186 (419)
Q Consensus 180 ~a~~~~~ 186 (419)
+|+..+.
T Consensus 173 ~A~~~~~ 179 (192)
T 2rfm_A 173 SARIFGR 179 (192)
T ss_dssp HHHHTTC
T ss_pred HHHHhCc
Confidence 9998753
No 60
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.95 E-value=5e-28 Score=206.62 Aligned_cols=154 Identities=17% Similarity=0.224 Sum_probs=148.3
Q ss_pred CccCCChHHHHHHHHhCCcccccccCCCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHH
Q 014730 1 MIEKNDWPGVEDFVTNHPDALTAKIVEPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCA 80 (419)
Q Consensus 1 A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~ 80 (419)
||+.|+.+.|+.|++..+.+++.+ +..| .||||+|| . .|+.+++++|++.| .+++..|..|.||||+|+
T Consensus 12 A~~~g~~~~v~~ll~~~~~~~~~~-~~~g-~t~L~~A~-~------~~~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~ 80 (179)
T 3f6q_A 12 QCREGNAVAVRLWLDNTENDLNQG-DDHG-FSPLHWAC-R------EGRSAVVEMLIMRG--ARINVMNRGDDTPLHLAA 80 (179)
T ss_dssp HHHHTCHHHHHHHHHCTTSCTTCC-CTTS-CCHHHHHH-H------TTCHHHHHHHHHTT--CCTTCCCTTCCCHHHHHH
T ss_pred HHHcCCHHHHHHHHhcCccccccc-CCCC-CCHHHHHH-H------cCcHHHHHHHHHcC--CCCCCcCCCCCCHHHHHH
Confidence 678999999999999988899998 9999 99999999 9 99999999999999 999999999999999999
Q ss_pred HcCCHHHHHHHHhcCCCCCccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHHHcCcHHHHHHHH
Q 014730 81 AKGNLKALKVLLKYNPDLTNIRDSDGYLPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLIAANLYDVALDLL 160 (419)
Q Consensus 81 ~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll 160 (419)
..|+.+++++|+++|++ ++.++..|.||||+|+..|+.+++++|+++|++++. .+..|.|||++|+..++.+++++|+
T Consensus 81 ~~~~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~~g~tpl~~A~~~~~~~~~~~L~ 158 (179)
T 3f6q_A 81 SHGHRDIVQKLLQYKAD-INAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSI-CNKYGEMPVDKAKAPLRELLRERAE 158 (179)
T ss_dssp HTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSB-CCTTSCCGGGGSCHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcch-hccCCCCcHHHHHHHHHHHHHHHHH
Confidence 99999999999999999 799999999999999999999999999999999999 9999999999999999999999999
Q ss_pred hhCCCCC
Q 014730 161 KLHPTIG 167 (419)
Q Consensus 161 ~~~~~~~ 167 (419)
+.|+++.
T Consensus 159 ~~g~~~~ 165 (179)
T 3f6q_A 159 KMGQNLN 165 (179)
T ss_dssp HTTCCCS
T ss_pred HhhcCcc
Confidence 9999876
No 61
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.95 E-value=7.8e-28 Score=201.78 Aligned_cols=149 Identities=21% Similarity=0.281 Sum_probs=84.9
Q ss_pred CccCCChHHHHHHHHhCCcccccccCCCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHH
Q 014730 1 MIEKNDWPGVEDFVTNHPDALTAKIVEPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCA 80 (419)
Q Consensus 1 A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~ 80 (419)
|+..|+.++++.|+++ +.+++.+ +..| .||||+|+ .|+.+++++|++.| .+++.+|..|.||||+|+
T Consensus 12 A~~~g~~~~v~~Ll~~-~~~~~~~-~~~g-~t~L~~A~--------~~~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~ 78 (162)
T 1ihb_A 12 AAARGDLEQLTSLLQN-NVNVNAQ-NGFG-RTALQVMK--------LGNPEIARRLLLRG--ANPDLKDRTGFAVIHDAA 78 (162)
T ss_dssp HHHHTCHHHHHHHTTS-CCCTTCC-CTTS-CCHHHHCC--------SSCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHH
T ss_pred HHHcCCHHHHHHHHhC-CCCcccc-CccC-ccHHHHHH--------cCcHHHHHHHHHcC--CCCCCCCCCCCCHHHHHH
Confidence 3445555555555544 4555555 5555 55555555 45555555555555 555555555555665555
Q ss_pred HcCCHHHHHHHHhcCCCCCccCCCCCchHHHHHHHcCCHHHHHHHHhcCCC-CccccCCCCCcHHHHHHHcCcHHHHHHH
Q 014730 81 AKGNLKALKVLLKYNPDLTNIRDSDGYLPVHNAAYYGHKDTFQYLLEATNG-VDIYRGNDGAMVLLFLIAANLYDVALDL 159 (419)
Q Consensus 81 ~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~-~~~~~~~~g~t~l~~a~~~~~~~~~~~L 159 (419)
..|+.+++++|+++|++ ++.++..|.||||+|+..|+.+++++|+++|++ ++. .+..|.||||+|+..|+.+++++|
T Consensus 79 ~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~~~g~t~l~~A~~~~~~~~~~~L 156 (162)
T 1ihb_A 79 RAGFLDTLQTLLEFQAD-VNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGH-RNHKGDTACDLARLYGRNEVVSLM 156 (162)
T ss_dssp HHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTC-CCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCC-cCCCCCcHHHHHHHcCCHHHHHHH
Confidence 55555555555555555 455555555565555555555555555555554 244 555555555555555555555555
Q ss_pred HhhCC
Q 014730 160 LKLHP 164 (419)
Q Consensus 160 l~~~~ 164 (419)
+++|+
T Consensus 157 l~~GA 161 (162)
T 1ihb_A 157 QANGA 161 (162)
T ss_dssp HHTC-
T ss_pred HHhCC
Confidence 55554
No 62
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.95 E-value=1.3e-27 Score=201.59 Aligned_cols=148 Identities=17% Similarity=0.136 Sum_probs=73.3
Q ss_pred ccCCChHHHHHHHHhCCcccccccCCCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHHH
Q 014730 2 IEKNDWPGVEDFVTNHPDALTAKIVEPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCAA 81 (419)
Q Consensus 2 ~~~g~~~~v~~ll~~~~~~~~~~~~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~~ 81 (419)
+..|+.++++.|++. +.+++.+ +..| .||||+|+ . .|+.+++++|++.| .+++..+..|.||||+|+.
T Consensus 11 ~~~g~~~~v~~ll~~-~~~~~~~-~~~g-~t~L~~A~-~------~~~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~ 78 (167)
T 3v31_A 11 AAQGEMLYLATRIEQ-ENVINHT-DEEG-FTPLMWAA-A------HGQIAVVEFLLQNG--ADPQLLGKGRESALSLACS 78 (167)
T ss_dssp HHTTCHHHHHHHHHH-SSCTTCC-CTTS-CCHHHHHH-H------TTCHHHHHHHHHTT--CCTTCCCTTCCCHHHHHHH
T ss_pred HHCCCHHHHHHHHHc-CCCcCCC-CCCC-CCHHHHHH-H------CCCHHHHHHHHHcC--CCCCCcCCCCCcHHHHHHH
Confidence 444455555555544 3444444 4444 55555555 4 45555555555554 4444444445555555555
Q ss_pred cCCHHHHHHHHhcCCCCCccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHHHcCcHHHHHHHHh
Q 014730 82 KGNLKALKVLLKYNPDLTNIRDSDGYLPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLIAANLYDVALDLLK 161 (419)
Q Consensus 82 ~g~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~ 161 (419)
.|+.+++++|+++|++ ++.++..|.||||+|+..|+.+++++|+++|++++. .+..|.||+++|+..|+.+++++|++
T Consensus 79 ~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~l~~A~~~~~~~~~~~L~~ 156 (167)
T 3v31_A 79 KGYTDIVKMLLDCGVD-VNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTI-ETDSGYNSMDLAVALGYRSVQQVIES 156 (167)
T ss_dssp HTCHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred cCCHHHHHHHHHCCCC-CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHcCcHHHHHHHHH
Confidence 5555555555555444 444444455555555555555555555555554444 44445555555555555555555544
Q ss_pred hC
Q 014730 162 LH 163 (419)
Q Consensus 162 ~~ 163 (419)
++
T Consensus 157 ~~ 158 (167)
T 3v31_A 157 HL 158 (167)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 63
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.95 E-value=1.1e-30 Score=232.10 Aligned_cols=156 Identities=15% Similarity=0.151 Sum_probs=132.6
Q ss_pred HHHHHHhCCcccccc--cCCCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHHHcCCHHH
Q 014730 10 VEDFVTNHPDALTAK--IVEPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCAAKGNLKA 87 (419)
Q Consensus 10 v~~ll~~~~~~~~~~--~~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~ 87 (419)
|+.|+++ +.+++.. .+..| .||||.|+ . .|+.+++++|++.| .+++.+|..|.||||+|+..|+.++
T Consensus 1 v~~ll~~-~~~~~~~~~~~~~~-~t~L~~A~-~------~g~~~~v~~Ll~~g--~~~~~~d~~g~tpLh~A~~~g~~~~ 69 (229)
T 2vge_A 1 MRSVLRK-AGSPRKARRARLNP-LVLLLDAA-L------TGELEVVQQAVKEM--NDPSQPNEEGITALHNAICGANYSI 69 (229)
T ss_dssp ----------CCCCCCCTTSCH-HHHHHHHH-H------HTCHHHHHHHHHHS--SCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred Ceehhcc-CCCCccccccccch-hHHHHHHH-H------cCCHHHHHHHHhcC--CCCCCCCCCCCCHHHHHHHcCCHHH
Confidence 3567766 4444332 14556 88999999 9 99999999999999 8999999999999999999999999
Q ss_pred HHHHHhcCCCCCccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccC-CCCCcHHHHH--HHcCcHHHHHHHHhhCC
Q 014730 88 LKVLLKYNPDLTNIRDSDGYLPVHNAAYYGHKDTFQYLLEATNGVDIYRG-NDGAMVLLFL--IAANLYDVALDLLKLHP 164 (419)
Q Consensus 88 ~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~-~~g~t~l~~a--~~~~~~~~~~~Ll~~~~ 164 (419)
+++|+++|++ ++.+|..|.||||+|+..|+.+++++|++.|++++. .+ ..|.||||+| +..|+.+++++|++.|+
T Consensus 70 v~~Ll~~ga~-~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~-~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga 147 (229)
T 2vge_A 70 VDFLITAGAN-VNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFA-TTLSDGATAFEKCDPYREGYADCATYLADVEQ 147 (229)
T ss_dssp HHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTC-CCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHH
T ss_pred HHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc-ccCCCCCCHHHHHHHHhcChHHHHHHHHHcCC
Confidence 9999999999 899999999999999999999999999999999998 75 6999999999 99999999999999998
Q ss_pred CCCcCCCCCCCcHHH
Q 014730 165 TIGRDNIDSRRIVLN 179 (419)
Q Consensus 165 ~~~~~~~~~g~~~l~ 179 (419)
++. ..|..|.+|++
T Consensus 148 ~~~-~~~~~~~~~l~ 161 (229)
T 2vge_A 148 SMG-LMNSGAVYALW 161 (229)
T ss_dssp HTT-TSGGGEEEESS
T ss_pred Ccc-cccCCchHHHH
Confidence 877 56666666655
No 64
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.95 E-value=5.6e-27 Score=197.67 Aligned_cols=146 Identities=18% Similarity=0.223 Sum_probs=140.1
Q ss_pred CCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCc
Q 014730 28 PGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCAAKGNLKALKVLLKYNPDLTNIRDSDGY 107 (419)
Q Consensus 28 ~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~ 107 (419)
.| .||||.|+ . .|+.+++++|++.+ .+++..|..|.||||+|+..|+.+++++|+++|++ ++.++..|.
T Consensus 2 ~~-~t~L~~A~-~------~g~~~~v~~ll~~~--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~ 70 (167)
T 3v31_A 2 AN-SLSVHQLA-A------QGEMLYLATRIEQE--NVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGAD-PQLLGKGRE 70 (167)
T ss_dssp TT-CCCHHHHH-H------TTCHHHHHHHHHHS--SCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCC
T ss_pred CC-cchHHHHH-H------CCCHHHHHHHHHcC--CCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCCcCCCCC
Confidence 46 99999999 9 99999999999999 88999999999999999999999999999999999 799999999
Q ss_pred hHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhhCCCCCcCCCCCCCcHHHHHHhCCC
Q 014730 108 LPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLIAANLYDVALDLLKLHPTIGRDNIDSRRIVLNTLSQKPY 186 (419)
Q Consensus 108 t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~~ 186 (419)
||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|++.|+++. .+|..|.||+++|+..+.
T Consensus 71 t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~~g~t~l~~A~~~~~ 147 (167)
T 3v31_A 71 SALSLACSKGYTDIVKMLLDCGVDVNE-YDWNGGTPLLYAVHGNHVKCVKMLLESGADPT-IETDSGYNSMDLAVALGY 147 (167)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHHTC
T ss_pred cHHHHHHHcCCHHHHHHHHHCCCCCCc-CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHcCc
Confidence 999999999999999999999999999 99999999999999999999999999999987 899999999999998754
No 65
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.95 E-value=3.6e-27 Score=195.91 Aligned_cols=142 Identities=17% Similarity=0.160 Sum_probs=87.0
Q ss_pred ccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCchHH
Q 014730 31 KTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCAAKGNLKALKVLLKYNPDLTNIRDSDGYLPV 110 (419)
Q Consensus 31 ~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~L 110 (419)
.||||.|+ . .|+.+++++|++.| .+++ .+..|.||||+|+..|+.+++++|+++|++ ++.++..|.|||
T Consensus 3 ~~~L~~A~-~------~g~~~~v~~Ll~~g--~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L 71 (153)
T 1awc_B 3 GKKLLEAA-R------AGQDDEVRILMANG--APFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVS-RDARTKVDRTPL 71 (153)
T ss_dssp HHHHHHHH-H------HTCHHHHHHHHHHT--CCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCC-TTCCCTTCCCHH
T ss_pred cHHHHHHH-H------cCCHHHHHHHHHcC--CCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHH
Confidence 45666666 6 66666666666666 4443 355566666666666666666666666665 455566666666
Q ss_pred HHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhhCCCCCcCCCCCCCcHHHHHHhCC
Q 014730 111 HNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLIAANLYDVALDLLKLHPTIGRDNIDSRRIVLNTLSQKP 185 (419)
Q Consensus 111 ~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~ 185 (419)
|+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|++.|+++. .+|..|.||+++|+..+
T Consensus 72 ~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~t~l~~A~~~~ 144 (153)
T 1awc_B 72 HMAASEGHANIVEVLLKHGADVNA-KDMLKMTALHWATEHNHQEVVELLIKYGADVH-TQSKFCKTAFDISIDNG 144 (153)
T ss_dssp HHHHHHTCHHHHHHHHTTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTT
T ss_pred HHHHHcChHHHHHHHHHcCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-ccCCCCCCHHHHHHHcC
Confidence 666666666666666666666666 56666666666666666666666666666555 55666666666665544
No 66
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.95 E-value=1.1e-27 Score=201.72 Aligned_cols=146 Identities=18% Similarity=0.204 Sum_probs=84.9
Q ss_pred CCCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCC
Q 014730 26 VEPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCAAKGNLKALKVLLKYNPDLTNIRDSD 105 (419)
Q Consensus 26 ~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~ 105 (419)
+.+| .||||.|+ . .|+.+++++|++.+ +.+++..+..|.||||+|+..|+.+++++|+++|++ ++.++..
T Consensus 5 ~~~~-~~~l~~A~-~------~g~~~~v~~ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~ 74 (165)
T 3twr_A 5 NSEA-DRQLLEAA-K------AGDVETVKKLCTVQ-SVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGAD-VHAKDKG 74 (165)
T ss_dssp -CHH-HHHHHHHH-H------HTCHHHHHHHCCTT-TTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTT
T ss_pred cchh-hHHHHHHH-H------hCCHHHHHHHHHcC-CCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCC-CCccCCC
Confidence 3444 56666666 5 56666666666544 244555555555666666666666666666666555 4555555
Q ss_pred CchHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhhCCCCCcCCCCCCCcHHHHHHh
Q 014730 106 GYLPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLIAANLYDVALDLLKLHPTIGRDNIDSRRIVLNTLSQ 183 (419)
Q Consensus 106 g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~ 183 (419)
|.||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|++.|+++. .+|..|.||+++|..
T Consensus 75 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~t~l~~a~~ 150 (165)
T 3twr_A 75 GLVPLHNACSYGHYEVAELLVKHGAVVNV-ADLWKFTPLHEAAAKGKYEICKLLLQHGADPT-KKNRDGNTPLDLVKD 150 (165)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCTGGGSCT
T ss_pred CCCHHHHHHHcCcHHHHHHHHhCCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc-ccCCCCCChhHhHhc
Confidence 66666666666666666666666665555 55556666666666666666666666655554 555566666665443
No 67
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.95 E-value=3.2e-27 Score=203.98 Aligned_cols=149 Identities=19% Similarity=0.186 Sum_probs=143.4
Q ss_pred CccCCChHHHHHHHHhCCcccccccCCCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHH
Q 014730 1 MIEKNDWPGVEDFVTNHPDALTAKIVEPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCA 80 (419)
Q Consensus 1 A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~ 80 (419)
|+..|+.++++.|++. +.+++.+ +..| .||||+|+ . .|+.+++++|++.| .+++..|..|.||||+|+
T Consensus 42 A~~~g~~~~v~~Ll~~-~~~~~~~-~~~g-~t~L~~A~-~------~~~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~ 109 (192)
T 2rfm_A 42 ACMLGMENAIDKLVEN-FDKLEDK-DIEG-STALIWAV-K------NNRLGIAEKLLSKG--SNVNTKDFSGKTPLMWSI 109 (192)
T ss_dssp HHHHTCGGGHHHHHHH-HCCTTCC-CTTS-CCHHHHHH-H------TTCHHHHHHHHHHT--CCTTCCCTTSCCHHHHHH
T ss_pred HHHcCCHHHHHHHHHh-ccccccc-cccC-ccHHHHHH-H------cCCHHHHHHHHHCC--CCCCCCCCCCCcHHHHHH
Confidence 5788999999999998 7888888 9999 99999999 9 99999999999999 899999999999999999
Q ss_pred HcCCHHHHHHHHhcCCCCCccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHHHcCcHHHHHHHH
Q 014730 81 AKGNLKALKVLLKYNPDLTNIRDSDGYLPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLIAANLYDVALDLL 160 (419)
Q Consensus 81 ~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll 160 (419)
..|+.+++++|+++|++ ++.++..|.||||+|+..|+.+++++|+++|++++. .+..|.||+++|+..|+.+++++|+
T Consensus 110 ~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~~g~t~l~~A~~~~~~~~v~~Ll 187 (192)
T 2rfm_A 110 IFGYSEMSYFLLEHGAN-VNDRNLEGETPLIVASKYGRSEIVKKLLELGADISA-RDLTGLTAEASARIFGRQEVIKIFT 187 (192)
T ss_dssp HHTCHHHHHHHHHTTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTC-BCTTSCBHHHHHHHTTCHHHHHHHH
T ss_pred HcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-cCCCCCCHHHHHHHhCcHHHHHHHH
Confidence 99999999999999999 799999999999999999999999999999999999 9999999999999999999999999
Q ss_pred hhC
Q 014730 161 KLH 163 (419)
Q Consensus 161 ~~~ 163 (419)
+.+
T Consensus 188 ~~~ 190 (192)
T 2rfm_A 188 EVR 190 (192)
T ss_dssp HHH
T ss_pred hcc
Confidence 875
No 68
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.95 E-value=6.7e-28 Score=218.47 Aligned_cols=176 Identities=18% Similarity=0.156 Sum_probs=153.1
Q ss_pred CccCCChHHHHHHHH---hCCcccccccC----CCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCcc---------
Q 014730 1 MIEKNDWPGVEDFVT---NHPDALTAKIV----EPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQT--------- 64 (419)
Q Consensus 1 A~~~g~~~~v~~ll~---~~~~~~~~~~~----~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~--------- 64 (419)
||+.|+.+.|+.|++ ..+.+++.+ + ..| .||||+|+ . +++.|+.+++++|++.| ++
T Consensus 12 A~~~g~~~~v~~ll~~l~~~~~~~~~~-~~~~~~~g-~t~L~~A~-~---~~~~g~~~~v~~Ll~~g--~~~~~~~~~~~ 83 (260)
T 3jxi_A 12 IVSRGSPDGLEGLLSFLLTHKKRLTDE-EFREPSTG-KTCLPKAL-L---NLSAGRNDTIPILLDIA--EKTGNMREFIN 83 (260)
T ss_dssp HHHHTCGGGGTTHHHHHHHHTCCTTSG-GGSCTTTC-CCHHHHHH-T---SCBTTBCTHHHHHHHHH--HHTTCHHHHHT
T ss_pred HHHhCCHHHHHHHHHHHHhcCCCcchh-hhhccCCC-CcHHHHHH-H---HhhcCCHHHHHHHHHhc--ccccchHhhhc
Confidence 678899997666666 237777765 4 679 99999999 6 33459999999999987 43
Q ss_pred --ccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCC--------------CCCchHHHHHHHcCCHHHHHHHHh-
Q 014730 65 --LARQDNHGHTAVIFCAAKGNLKALKVLLKYNPDLTNIRD--------------SDGYLPVHNAAYYGHKDTFQYLLE- 127 (419)
Q Consensus 65 --~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~--------------~~g~t~L~~A~~~g~~~~~~~Ll~- 127 (419)
++..|..|.||||+|+..|+.+++++|+++|++ ++.++ ..|.||||+|+..|+.+++++|++
T Consensus 84 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~ 162 (260)
T 3jxi_A 84 SPFRDVYYRGQTALHIAIERRCKHYVELLVEKGAD-VHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTEN 162 (260)
T ss_dssp CCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHC
T ss_pred ccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCC-cCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 444566899999999999999999999999999 78888 689999999999999999999999
Q ss_pred --cCCCCccccCCCCCcHHHHHHHcCc---------HHHHHHHHhhCCCCC------cCCCCCCCcHHHHHHhCCC
Q 014730 128 --ATNGVDIYRGNDGAMVLLFLIAANL---------YDVALDLLKLHPTIG------RDNIDSRRIVLNTLSQKPY 186 (419)
Q Consensus 128 --~g~~~~~~~~~~g~t~l~~a~~~~~---------~~~~~~Ll~~~~~~~------~~~~~~g~~~l~~a~~~~~ 186 (419)
.|++++. .+..|+||||+|+..++ .+++++|++.|+++. +.+|..|.||||+|+..+.
T Consensus 163 ~~~ga~~~~-~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~ 237 (260)
T 3jxi_A 163 GHKQADLRR-QDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGK 237 (260)
T ss_dssp SSCCCCTTC-CCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTC
T ss_pred cccCCCCcc-cCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCC
Confidence 9999999 99999999999998887 799999999998873 3689999999999999764
No 69
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.95 E-value=1.3e-27 Score=218.61 Aligned_cols=170 Identities=14% Similarity=0.143 Sum_probs=155.3
Q ss_pred ccCCChHHHHHHHHhCCcc--cccccCCCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCc-cccccCCCCChHHHH
Q 014730 2 IEKNDWPGVEDFVTNHPDA--LTAKIVEPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQ-TLARQDNHGHTAVIF 78 (419)
Q Consensus 2 ~~~g~~~~v~~ll~~~~~~--~~~~~~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~-~~~~~~~~g~t~L~~ 78 (419)
+..|+++.++.+++. ..+ +|.+ |..| .||||+|| . .|+.+++++|++.| . +++..|..|.||||+
T Consensus 84 ~~~~~~~~~~~l~~~-~~~~~~n~~-d~~g-~T~Lh~A~-~------~g~~~~v~~Ll~~g--~~~~~~~~~~g~tpL~~ 151 (276)
T 4hbd_A 84 LVRRHLVTFRAMSAR-LLDYVVNIA-DSNG-NTALHYSV-S------HANFPVVQQLLDSG--VCKVDKQNRAGYSPIML 151 (276)
T ss_dssp HHHHHHHHHHHHCHH-HHHHHHTCC-CTTS-CCHHHHHH-H------TTCHHHHHHHHHTS--CCCTTCCCTTSCCHHHH
T ss_pred HHHHHHHHHHHHHHH-HHhhcCcCC-CCCC-CCHHHHHH-H------CCCHHHHHHHHHCC--CCcCCCCCCCCCCHHHH
Confidence 345667778888766 333 7788 9999 99999999 9 99999999999999 6 899999999999999
Q ss_pred HH-----HcCCHHHHHHHHhcCCCCCccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHHHcCcH
Q 014730 79 CA-----AKGNLKALKVLLKYNPDLTNIRDSDGYLPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLIAANLY 153 (419)
Q Consensus 79 A~-----~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~~~ 153 (419)
|+ ..++.+++++|++.|.. ++..+..|.||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.
T Consensus 152 a~~~~~~~~~~~~~v~~Ll~~g~~-~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~-~d~~G~TpLh~A~~~g~~ 229 (276)
T 4hbd_A 152 TALATLKTQDDIETVLQLFRLGNI-NAKASQAGQTALMLAVSHGRVDVVKALLACEADVNV-QDDDGSTALMCACEHGHK 229 (276)
T ss_dssp GGGCCCCSHHHHHHHHHHHHHSCT-TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHHTCH
T ss_pred HHHHHhhhhhhHHHHHHHHHcCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCC-CCCCCCCHHHHHHHCCCH
Confidence 99 66889999999999987 688888999999999999999999999999999999 999999999999999999
Q ss_pred HHHHHHHh-hCCCCCcCCCCCCCcHHHHHHhCCC
Q 014730 154 DVALDLLK-LHPTIGRDNIDSRRIVLNTLSQKPY 186 (419)
Q Consensus 154 ~~~~~Ll~-~~~~~~~~~~~~g~~~l~~a~~~~~ 186 (419)
+++++|++ .|+++. .+|..|.|||++|+..+.
T Consensus 230 ~iv~~Ll~~~gad~~-~~d~~g~TpL~~A~~~g~ 262 (276)
T 4hbd_A 230 EIAGLLLAVPSCDIS-LTDRDGSTALMVALDAGQ 262 (276)
T ss_dssp HHHHHHHTSTTCCTT-CCCTTSCCHHHHHHHHTC
T ss_pred HHHHHHHhcCCCCCc-CcCCCCCCHHHHHHHcCC
Confidence 99999999 788887 899999999999998753
No 70
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.95 E-value=6e-27 Score=195.11 Aligned_cols=147 Identities=24% Similarity=0.258 Sum_probs=111.7
Q ss_pred CccCCChHHHHHHHHhCCcccccccCCCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHH
Q 014730 1 MIEKNDWPGVEDFVTNHPDALTAKIVEPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCA 80 (419)
Q Consensus 1 A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~ 80 (419)
|+..|+.+.++.|++..+.+++.+ +..| .||||+ + . .|+.+++++|++.| .+++.+|..|.||||+|+
T Consensus 9 A~~~g~~~~v~~ll~~~~~~~~~~-~~~g-~t~L~~-~-~------~~~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~ 76 (156)
T 1bd8_A 9 AAARGDVQEVRRLLHRELVHPDAL-NRFG-KTALQV-M-M------FGSTAIALELLKQG--ASPNVQDTSGTSPVHDAA 76 (156)
T ss_dssp HHHHTCHHHHHHHHHTTCCCTTCC-CTTS-CCHHHH-S-C------TTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHH
T ss_pred HHHhCCHHHHHHHHHhhCcCcccc-CCCC-CcHHHH-H-H------cCCHHHHHHHHHCC--CCCCCcCCCCCCHHHHHH
Confidence 466777777777777755567676 7777 777777 6 6 77777777777777 777777777777777777
Q ss_pred HcCCHHHHHHHHhcCCCCCccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHHHcCcHHHHHHHH
Q 014730 81 AKGNLKALKVLLKYNPDLTNIRDSDGYLPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLIAANLYDVALDLL 160 (419)
Q Consensus 81 ~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll 160 (419)
..|+.+++++|+++|++ ++.++..|.||||+|+..|+.+++++|++. ++++. .+..|.||||+|+..|+.+++++|+
T Consensus 77 ~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~-~~~~g~t~l~~A~~~~~~~~v~~Ll 153 (156)
T 1bd8_A 77 RTGFLDTLKVLVEHGAD-VNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHR-RDARGLTPLELALQRGAQDLVDILQ 153 (156)
T ss_dssp HTTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTC-CCTTSCCHHHHHHHSCCHHHHHHHH
T ss_pred HcCcHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCC-cCCCCCCHHHHHHHcCcHHHHHHHH
Confidence 77777777777777777 677777777777777777777777777777 77777 7777777777777777777777777
Q ss_pred hh
Q 014730 161 KL 162 (419)
Q Consensus 161 ~~ 162 (419)
++
T Consensus 154 ~~ 155 (156)
T 1bd8_A 154 GH 155 (156)
T ss_dssp TT
T ss_pred hh
Confidence 53
No 71
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.94 E-value=1.9e-26 Score=194.95 Aligned_cols=125 Identities=28% Similarity=0.358 Sum_probs=120.1
Q ss_pred CCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCC
Q 014730 27 EPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCAAKGNLKALKVLLKYNPDLTNIRDSDG 106 (419)
Q Consensus 27 ~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g 106 (419)
..| .||||+|+ . .|+.+++++|++.| .+++..|..|.||||+|+..|+.+++++|+++|++ ++.++..|
T Consensus 45 ~~g-~t~L~~A~-~------~~~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g 113 (169)
T 2y1l_E 45 ASG-WTPLHLAA-F------NGHLEIVEVLLKNG--ADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGAD-VNANDMEG 113 (169)
T ss_dssp TTS-CCHHHHHH-H------TTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTS
T ss_pred CCC-CCHHHHHH-H------cCCHHHHHHHHHcC--CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCC
Confidence 467 99999999 9 99999999999999 89999999999999999999999999999999999 79999999
Q ss_pred chHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhhC
Q 014730 107 YLPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLIAANLYDVALDLLKLH 163 (419)
Q Consensus 107 ~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~ 163 (419)
.||||+|+..|+.+++++|+++|++++. .+..|.|||++|+..|+.+++++|++.|
T Consensus 114 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 114 HTPLHLAAMFGHLEIVEVLLKNGADVNA-QDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 9999999999999999999999999999 9999999999999999999999999865
No 72
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.94 E-value=1.5e-28 Score=220.11 Aligned_cols=141 Identities=13% Similarity=0.108 Sum_probs=97.0
Q ss_pred CCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCC
Q 014730 27 EPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCAAKGNLKALKVLLKYNPDLTNIRDSDG 106 (419)
Q Consensus 27 ~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g 106 (419)
..| .||||.|+ . .|+.+.++.|+++| .+++. +..|.||||.|+..|+.+++++|++.|++ ++.++..|
T Consensus 3 ~~g-~t~L~~a~-~------~~~~~~~~~ll~~g--~~~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~d~~g 70 (239)
T 1ycs_B 3 ITG-QVSLPPGK-R------TNLRKTGSERIAHG--MRVKF-NPLPLALLLDSSLEGEFDLVQRIIYEVDD-PSLPNDEG 70 (239)
T ss_dssp ---------------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSS-CCCCCTTS
T ss_pred ccc-cccCchhh-h------hhhHHHHHHHhccC--CCccc-CchhhHHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCC
Confidence 457 99999999 9 99999999999999 88875 47889999999999999999999999998 89999999
Q ss_pred chHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhhCCCCCcCCCCCCC-cHHHHH
Q 014730 107 YLPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLIAANLYDVALDLLKLHPTIGRDNIDSRR-IVLNTL 181 (419)
Q Consensus 107 ~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~-~~l~~a 181 (419)
.||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|++.|+++. ..+..|. ||+|+|
T Consensus 71 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~~~~t~l~~a 144 (239)
T 1ycs_B 71 ITALHNAVCAGHTEIVKFLVQFGVNVNA-ADSDGWTPLHCAASCNNVQVCKFLVESGAAVF-AMTYSDMQTAADKC 144 (239)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHTCCTTC-CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCSSSCCCHHHHC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCc-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc-eecCCCCcchHHHH
Confidence 9999999999999999999999999999 99999999999999999999999999999887 4544433 555543
No 73
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.94 E-value=2.1e-26 Score=191.25 Aligned_cols=119 Identities=19% Similarity=0.168 Sum_probs=115.8
Q ss_pred CCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCch
Q 014730 29 GSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCAAKGNLKALKVLLKYNPDLTNIRDSDGYL 108 (419)
Q Consensus 29 g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t 108 (419)
| .||||+|+ . .|+.+++++|++.| .+++..|..|.||||+|+..|+.+++++|+++|++ ++.++..|.|
T Consensus 34 g-~t~L~~A~-~------~~~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t 102 (153)
T 1awc_B 34 G-TSPLHLAA-Q------YGHFSTTEVLLRAG--VSRDARTKVDRTPLHMAASEGHANIVEVLLKHGAD-VNAKDMLKMT 102 (153)
T ss_dssp C-CCHHHHHH-H------HTCHHHHHHHHTTT--CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCC-TTCCCTTSCC
T ss_pred C-CCHHHHHH-H------cCCHHHHHHHHHcC--CCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCC-CCCCCCCCCC
Confidence 6 89999999 9 99999999999999 89999999999999999999999999999999999 7999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHHHcCcHHHHHHH
Q 014730 109 PVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLIAANLYDVALDL 159 (419)
Q Consensus 109 ~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L 159 (419)
|||+|+..|+.+++++|+++|++++. .+..|.|||++|+..|+.+++++|
T Consensus 103 ~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 103 ALHWATEHNHQEVVELLIKYGADVHT-QSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCccc-cCCCCCCHHHHHHHcCCHHHHHHh
Confidence 99999999999999999999999999 999999999999999999999987
No 74
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.94 E-value=1.6e-26 Score=193.78 Aligned_cols=147 Identities=22% Similarity=0.230 Sum_probs=138.2
Q ss_pred CCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCC
Q 014730 27 EPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCAAKGNLKALKVLLKYNPDLTNIRDSDG 106 (419)
Q Consensus 27 ~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g 106 (419)
+.. .||||.|+ . .|+.+++++|++.| .+++..|..|.||||+|+. |+.+++++|+++|++ ++.++..|
T Consensus 3 ~~~-~~~L~~A~-~------~g~~~~v~~Ll~~~--~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~-~~~~~~~g 70 (162)
T 1ihb_A 3 EPW-GNELASAA-A------RGDLEQLTSLLQNN--VNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGAN-PDLKDRTG 70 (162)
T ss_dssp --C-HHHHHHHH-H------HTCHHHHHHHTTSC--CCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCC-TTCCCTTS
T ss_pred chH-hhHHHHHH-H------cCCHHHHHHHHhCC--CCccccCccCccHHHHHHc-CcHHHHHHHHHcCCC-CCCCCCCC
Confidence 345 79999999 9 99999999999999 8999999999999999999 999999999999999 79999999
Q ss_pred chHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhhCCCCCcCCCCCCCcHHHHHHhCCC
Q 014730 107 YLPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLIAANLYDVALDLLKLHPTIGRDNIDSRRIVLNTLSQKPY 186 (419)
Q Consensus 107 ~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~~ 186 (419)
.||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|++.|++....++..|.||||+|+..+.
T Consensus 71 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~ 149 (162)
T 1ihb_A 71 FAVIHDAARAGFLDTLQTLLEFQADVNI-EDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGR 149 (162)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCC
Confidence 9999999999999999999999999999 999999999999999999999999999998644899999999999998753
No 75
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.94 E-value=1.4e-26 Score=188.39 Aligned_cols=134 Identities=18% Similarity=0.129 Sum_probs=128.2
Q ss_pred CcccccccCCCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCC
Q 014730 18 PDALTAKIVEPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCAAKGNLKALKVLLKYNPD 97 (419)
Q Consensus 18 ~~~~~~~~~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~ 97 (419)
+.+++.+ +..| .||||+|+ . .|+.+++++|++.| .+++.+|..|.||||+|+. |+.+++++|+++|++
T Consensus 2 ~~~~~~~-~~~g-~t~L~~A~-~------~~~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~ 69 (136)
T 1d9s_A 2 SPGIHML-GGSS-DAGLATAA-A------RGQVETVRQLLEAG--ADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAE 69 (136)
T ss_dssp CCCCSCC-CCCC-SCHHHHHH-H------TTCHHHHHHHHHTT--CCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCC
T ss_pred CCCccCC-CCCC-ccHHHHHH-H------cCCHHHHHHHHHcC--CCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCC
Confidence 4567788 9999 99999999 9 99999999999999 9999999999999999999 999999999999999
Q ss_pred CCccCCCC-CchHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhhCCC
Q 014730 98 LTNIRDSD-GYLPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLIAANLYDVALDLLKLHPT 165 (419)
Q Consensus 98 ~~~~~~~~-g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~ 165 (419)
++.++.. |.||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..++.+++++|+++|++
T Consensus 70 -~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 70 -PNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDV-CDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp -SSCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCC-CSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred -CCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 7999999 99999999999999999999999999999 999999999999999999999999999874
No 76
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.94 E-value=2.4e-26 Score=193.34 Aligned_cols=124 Identities=19% Similarity=0.175 Sum_probs=117.3
Q ss_pred CCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCc
Q 014730 28 PGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCAAKGNLKALKVLLKYNPDLTNIRDSDGY 107 (419)
Q Consensus 28 ~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~ 107 (419)
.| .||||+|+ . .|+.+++++|++.| .+++.+|..|.||||+|+..|+.+++++|+++|++ ++.++..|.
T Consensus 41 ~g-~t~L~~A~-~------~~~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~ 109 (165)
T 3twr_A 41 RQ-STPLHFAA-G------YNRVSVVEYLLQHG--ADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAV-VNVADLWKF 109 (165)
T ss_dssp TC-CCHHHHHH-H------TTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCC
T ss_pred CC-CCHHHHHH-H------cChHHHHHHHHhcC--CCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCC-CCCcCCCCC
Confidence 35 79999999 9 99999999999999 99999999999999999999999999999999999 799999999
Q ss_pred hHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhhCC
Q 014730 108 LPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLIAANLYDVALDLLKLHP 164 (419)
Q Consensus 108 t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~ 164 (419)
||||+|+..|+.+++++|+++|++++. .+..|.||+++|.. ++.+++++|++.|+
T Consensus 110 t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 110 TPLHEAAAKGKYEICKLLLQHGADPTK-KNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCcc-cCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 999999999999999999999999999 99999999999776 89999999998875
No 77
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.94 E-value=1.7e-26 Score=206.62 Aligned_cols=185 Identities=10% Similarity=0.033 Sum_probs=127.6
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHH
Q 014730 69 DNHGHTAVIFCAAKGNLKALKVLLKYNPDLTNIRDSDGYLPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLI 148 (419)
Q Consensus 69 ~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~ 148 (419)
+..|.||||.|++.|..++++.|+++|++ ++. +..|.||||.|+..|+.+++++|++.|++++. .+..|.||||+|+
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g~~-~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~d~~g~t~L~~A~ 78 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAHGMR-VKF-NPLPLALLLDSSLEGEFDLVQRIIYEVDDPSL-PNDEGITALHNAV 78 (239)
T ss_dssp -------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCC-CCTTSCCHHHHHH
T ss_pred CccccccCchhhhhhhHHHHHHHhccCCC-ccc-CchhhHHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHH
Confidence 35699999999999999999999999998 565 46789999999999999999999999999999 9999999999999
Q ss_pred HcCcHHHHHHHHhhCCCCCcCCCCCCCcHHHHHHhCCCCCCCCCchhHHHHHHHhhhcccCCCCcccccccccccCCCCC
Q 014730 149 AANLYDVALDLLKLHPTIGRDNIDSRRIVLNTLSQKPYAFASGSRLGRLRRLIYNCWCQQSCIPLEKERVPSIQSNDDQN 228 (419)
Q Consensus 149 ~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (419)
..|+.+++++|++.|+++. .+|..|
T Consensus 79 ~~g~~~~v~~Ll~~ga~~~-~~d~~g------------------------------------------------------ 103 (239)
T 1ycs_B 79 CAGHTEIVKFLVQFGVNVN-AADSDG------------------------------------------------------ 103 (239)
T ss_dssp HHTCHHHHHHHHHHTCCTT-CCCTTC------------------------------------------------------
T ss_pred HcCCHHHHHHHHHcCCCCC-ccCCCC------------------------------------------------------
Confidence 9999999999999998775 333222
Q ss_pred CCCCCCccccccccCCCCCCCCCChhhHHHHHhhHHHHHHHHHHHHhhhcCchhHHHHHHhhhhHhHHHHHHHHHhhhhh
Q 014730 229 VDGDTENFTVTSKMHPKESTPFGSTQQITAIFGLMFHKLNRMLWNALMRLAPSIKVIHDQKLTHMRTVEIVRIICEGVVW 308 (419)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~ 308 (419)
T Consensus 104 -------------------------------------------------------------------------------- 103 (239)
T 1ycs_B 104 -------------------------------------------------------------------------------- 103 (239)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccchhhhhHHHHHHHHhChHHHHHHHHHhcCCccccccCCCC-chHHHH--HhhchHHHHHHHhhcc-c-----ccce
Q 014730 309 TNFQKSAQLSGAMLSAAILGIPEVVNEFIMAYDSCSNWSNQDGH-TIFDHA--VLHRREKVFNLIQGVN-F-----TTFL 379 (419)
Q Consensus 309 ~~~~~~~~~~t~L~~A~~~g~~e~v~~Ll~~~~~d~~~~~~~g~-t~Lh~A--v~~~~~~iv~~L~~~~-~-----~~~~ 379 (419)
.||||+|+..|+.++|++|++. |++++..+..|. ||||+| +..++.+++++|++.+ . ....
T Consensus 104 ---------~tpL~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~~~~~~ 173 (239)
T 1ycs_B 104 ---------WTPLHCAASCNNVQVCKFLVES-GAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVI 173 (239)
T ss_dssp ---------CCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTTTGGGEE
T ss_pred ---------CCHHHHHHHcCCHHHHHHHHHc-CCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhcccccccceE
Confidence 5677777778889999999999 999999995554 999999 7889999999999986 1 1122
Q ss_pred eeeccCCCCccchhcccccCCC
Q 014730 380 FSSRDKSGNNILHLAGRLVPSS 401 (419)
Q Consensus 380 ~~~~D~~G~t~Lh~A~~~~~~~ 401 (419)
....|..|.|++|+|.+.|+.-
T Consensus 174 ~al~d~~~~~~~eLa~~~G~~i 195 (239)
T 1ycs_B 174 YALWDYEPQNDDELPMKEGDCM 195 (239)
T ss_dssp EESSCBCCSSTTBCCBCSSCEE
T ss_pred EEEeccCCCCCCcccccCCCEE
Confidence 3445888999999999888743
No 78
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.94 E-value=1.7e-28 Score=232.96 Aligned_cols=144 Identities=16% Similarity=0.088 Sum_probs=115.2
Q ss_pred CCCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCc-cccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCC--CccC
Q 014730 26 VEPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQ-TLARQDNHGHTAVIFCAAKGNLKALKVLLKYNPDL--TNIR 102 (419)
Q Consensus 26 ~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~-~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~--~~~~ 102 (419)
+.++ .||||+|+ . .|+.++|++|++.|.+. ..+..+..|.||||+||..|+.+++++|+++|++. .+..
T Consensus 89 g~~~-~T~Lh~Aa-~------~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~ 160 (376)
T 2aja_A 89 GIKS-EVICFVAA-I------TGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQ 160 (376)
T ss_dssp TCCH-HHHHHHHH-H------HCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHS
T ss_pred CCCc-CCHHHHHH-H------cCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccC
Confidence 4456 89999999 9 99999999999998211 12234557889999999999999999999999741 1222
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHhcCCCCccc-cCCCCCcHHHHHH-HcCcHHHHHHHHhhCCCCCcCCCCCCCcHHHH
Q 014730 103 DSDGYLPVHNAAYYGHKDTFQYLLEATNGVDIY-RGNDGAMVLLFLI-AANLYDVALDLLKLHPTIGRDNIDSRRIVLNT 180 (419)
Q Consensus 103 ~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~-~~~~g~t~l~~a~-~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~ 180 (419)
+.+ .||||+|+..|+.+++++|+++|++++.. .+..|.||||+|+ ..|+.+++++|++.|+ .|.||+++
T Consensus 161 ~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga--------~~~taL~~ 231 (376)
T 2aja_A 161 AEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV--------MLAYAEIH 231 (376)
T ss_dssp HHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH--------HHHHHHHC
T ss_pred CCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC--------ccchHHHH
Confidence 223 89999999999999999999999986531 4567899999999 9999999999998663 27899999
Q ss_pred HHhCCC
Q 014730 181 LSQKPY 186 (419)
Q Consensus 181 a~~~~~ 186 (419)
|+..+.
T Consensus 232 Aa~~g~ 237 (376)
T 2aja_A 232 EFEYGE 237 (376)
T ss_dssp TTTTTT
T ss_pred HHHCCC
Confidence 988754
No 79
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.93 E-value=8.2e-26 Score=192.85 Aligned_cols=146 Identities=16% Similarity=0.195 Sum_probs=136.4
Q ss_pred CCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCC
Q 014730 27 EPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCAAKGNLKALKVLLKYNPDLTNIRDSDG 106 (419)
Q Consensus 27 ~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g 106 (419)
+++ .++||.|| . .|+.+++++|++.+ +.+++..|..|.||||+|+..|+.+++++|+++|++ ++.++..|
T Consensus 3 ~~~-~~~l~~A~-~------~g~~~~v~~ll~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g 72 (179)
T 3f6q_A 3 PEF-MDDIFTQC-R------EGNAVAVRLWLDNT-ENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGAR-INVMNRGD 72 (179)
T ss_dssp -----CCHHHHH-H------HTCHHHHHHHHHCT-TSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTC
T ss_pred HHH-HHHHHHHH-H------cCCHHHHHHHHhcC-cccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-CCCcCCCC
Confidence 456 89999999 9 99999999999996 478999999999999999999999999999999999 79999999
Q ss_pred chHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhhCCCCCcCCCCCCCcHHHHHHhC
Q 014730 107 YLPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLIAANLYDVALDLLKLHPTIGRDNIDSRRIVLNTLSQK 184 (419)
Q Consensus 107 ~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~ 184 (419)
.||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|++.|+++. .+|..|.||+++|+..
T Consensus 73 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~tpl~~A~~~ 148 (179)
T 3f6q_A 73 DTPLHLAASHGHRDIVQKLLQYKADINA-VNEHGNVPLHYACFWGQDQVAEDLVANGALVS-ICNKYGEMPVDKAKAP 148 (179)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSS-BCCTTSCCGGGGSCHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCc-cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcc-hhccCCCCcHHHHHHH
Confidence 9999999999999999999999999999 99999999999999999999999999999988 8999999999999764
No 80
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.93 E-value=2e-26 Score=192.08 Aligned_cols=142 Identities=20% Similarity=0.164 Sum_probs=120.6
Q ss_pred CCCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCC
Q 014730 26 VEPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCAAKGNLKALKVLLKYNPDLTNIRDSD 105 (419)
Q Consensus 26 ~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~ 105 (419)
+..| .||||+|+ . .|+.+++++|++.| .+++..|..|.||||+|+ .|+.+++++|+++|++ ++.++..
T Consensus 9 ~~~~-~t~L~~A~-~------~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~-~~~~d~~ 76 (156)
T 1bi7_B 9 MEPS-ADWLATAA-A------RGRVEEVRALLEAG--ANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAE-PNCADPA 76 (156)
T ss_dssp -CCS-TTHHHHHH-H------HTCHHHHHHHHTTT--CCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCC-CCCCCTT
T ss_pred Cccc-hHHHHHHH-H------cCCHHHHHHHHHcC--CCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCC-CCCcCCC
Confidence 7788 99999999 9 99999999999999 899999999999999986 9999999999999999 8999999
Q ss_pred Cch-HHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhhCCCCCcCCCCCCCcHHHHH
Q 014730 106 GYL-PVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLIAANLYDVALDLLKLHPTIGRDNIDSRRIVLNTL 181 (419)
Q Consensus 106 g~t-~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a 181 (419)
|.| |||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|+++|+++. .++..|.||.+.+
T Consensus 77 g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~-~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 77 TLTRPVHDAAREGFLDTLVVLHRAGARLDV-RDAWGRLPVDLAEELGHRDVARYLRAAAGGTR-GSNHARIDAAEGP 151 (156)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHHTCCSSC-CCTTCCCHHHHHHHHTCHHHHHHHSSCC------------------
T ss_pred CCcHHHHHHHHCCCHHHHHHHHHcCCCCcc-cCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCC-ccCcCcCcccccC
Confidence 999 99999999999999999999999999 99999999999999999999999999999988 8899999998744
No 81
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.93 E-value=2.1e-25 Score=185.70 Aligned_cols=143 Identities=20% Similarity=0.186 Sum_probs=135.7
Q ss_pred ccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCchHH
Q 014730 31 KTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCAAKGNLKALKVLLKYNPDLTNIRDSDGYLPV 110 (419)
Q Consensus 31 ~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~L 110 (419)
.||||.|+ . .|+.+++++|++.. +.+++..|..|.||||+ +..|+.+++++|+++|++ ++.++..|.|||
T Consensus 3 ~~~L~~A~-~------~g~~~~v~~ll~~~-~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L 72 (156)
T 1bd8_A 3 GDRLSGAA-A------RGDVQEVRRLLHRE-LVHPDALNRFGKTALQV-MMFGSTAIALELLKQGAS-PNVQDTSGTSPV 72 (156)
T ss_dssp HHHHHHHH-H------HTCHHHHHHHHHTT-CCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCC-TTCCCTTSCCHH
T ss_pred chHHHHHH-H------hCCHHHHHHHHHhh-CcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCC-CCCcCCCCCCHH
Confidence 79999999 9 99999999999993 47899999999999999 999999999999999999 799999999999
Q ss_pred HHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhhCCCCCcCCCCCCCcHHHHHHhCCC
Q 014730 111 HNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLIAANLYDVALDLLKLHPTIGRDNIDSRRIVLNTLSQKPY 186 (419)
Q Consensus 111 ~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~~ 186 (419)
|+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|++. +++. .+|..|.|||++|+..+.
T Consensus 73 ~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~-~~~~~g~t~l~~A~~~~~ 145 (156)
T 1bd8_A 73 HDAARTGFLDTLKVLVEHGADVNV-PDGTGALPIHLAVQEGHTAVVSFLAAE-SDLH-RRDARGLTPLELALQRGA 145 (156)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCSCC-CCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTT-CCCTTSCCHHHHHHHSCC
T ss_pred HHHHHcCcHHHHHHHHHcCCCCCC-cCCCCCcHHHHHHHhChHHHHHHHHhc-cCCC-CcCCCCCCHHHHHHHcCc
Confidence 999999999999999999999999 999999999999999999999999998 7776 899999999999998754
No 82
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.93 E-value=2.5e-27 Score=224.87 Aligned_cols=137 Identities=15% Similarity=0.059 Sum_probs=111.2
Q ss_pred ccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCC--CccCCCCCch
Q 014730 31 KTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCAAKGNLKALKVLLKYNPDL--TNIRDSDGYL 108 (419)
Q Consensus 31 ~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~--~~~~~~~g~t 108 (419)
.+++++|+.. .++.++++++++.| .+. .||||+|+..|+.+++++|+++|+.. ....+..|.|
T Consensus 66 ll~~~~a~~~------~~~~~~~~~l~~~g--~~~-------~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~t 130 (376)
T 2aja_A 66 LLCLYYAHYN------RNAKQLWSDAHKKG--IKS-------EVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQ 130 (376)
T ss_dssp HHHHHHHHTT------TTCTTHHHHHHHHT--CCH-------HHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHH
T ss_pred HHHHHHHHhc------CCCHHHHHHHHHcC--CCc-------CCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCC
Confidence 5678887723 47789999999988 433 49999999999999999999998731 1234557889
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCC---ccccCCCCCcHHHHHHHcCcHHHHHHHHhhCCCCCcC--CCCCCCcHHHHHH-
Q 014730 109 PVHNAAYYGHKDTFQYLLEATNGV---DIYRGNDGAMVLLFLIAANLYDVALDLLKLHPTIGRD--NIDSRRIVLNTLS- 182 (419)
Q Consensus 109 ~L~~A~~~g~~~~~~~Ll~~g~~~---~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~--~~~~g~~~l~~a~- 182 (419)
|||+|+..|+.+++++|+++|+++ +. .+.+ .||||+|+..|+.+++++|+++|+++. . .|..|.||||+|+
T Consensus 131 pL~~Aa~~G~~eiv~~Ll~~gad~~~~~i-~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~-~~~~d~~g~TpL~~Aa~ 207 (376)
T 2aja_A 131 AFRLAAENGHLHVLNRLCELAPTEIMAMI-QAEN-YHAFRLAAENGHLHVLNRLCELAPTEA-TAMIQAENYYAFRWAAV 207 (376)
T ss_dssp HHHHHHHTTCHHHHHHHHHSCTTTHHHHH-SHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGH-HHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHcCCHHHHHHHHhCCCCcccccc-CCCC-CCHHHHHHHCCCHHHHHHHHHcCCccc-hhccCCCCCCHHHHHHH
Confidence 999999999999999999999863 33 2233 999999999999999999999998865 4 7788999999999
Q ss_pred hCC
Q 014730 183 QKP 185 (419)
Q Consensus 183 ~~~ 185 (419)
..+
T Consensus 208 ~~G 210 (376)
T 2aja_A 208 GRG 210 (376)
T ss_dssp TTC
T ss_pred HCC
Confidence 865
No 83
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.92 E-value=1.9e-24 Score=172.77 Aligned_cols=126 Identities=27% Similarity=0.383 Sum_probs=121.6
Q ss_pred CCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCc
Q 014730 28 PGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCAAKGNLKALKVLLKYNPDLTNIRDSDGY 107 (419)
Q Consensus 28 ~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~ 107 (419)
+| .||||.|+ . .|+.+++++|++.| .+++..+..|.||||+|+..|+.+++++|+++|++ ++.++..|.
T Consensus 1 ~g-~t~L~~A~-~------~~~~~~v~~Ll~~~--~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~ 69 (126)
T 1n0r_A 1 NG-RTPLHLAA-R------NGHLEVVKLLLEAG--ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGR 69 (126)
T ss_dssp CC-CCHHHHHH-H------HTCHHHHHHHHHHT--CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSC
T ss_pred CC-ccHHHHHH-H------cCcHHHHHHHHHcC--CCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCC-CcccCCCCC
Confidence 46 99999999 9 99999999999999 88999999999999999999999999999999999 799999999
Q ss_pred hHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhhCCC
Q 014730 108 LPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLIAANLYDVALDLLKLHPT 165 (419)
Q Consensus 108 t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~ 165 (419)
||||+|+..|+.+++++|+++|++++. .+..|.|||++|+..++.+++++|+++|++
T Consensus 70 t~l~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 70 TPLHLAARNGHLEVVKLLLEAGADVNA-KDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred cHHHHHHHcChHHHHHHHHHcCCCCcc-cCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 999999999999999999999999999 999999999999999999999999999874
No 84
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.92 E-value=9.4e-25 Score=177.50 Aligned_cols=126 Identities=25% Similarity=0.282 Sum_probs=120.1
Q ss_pred CCCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCC
Q 014730 26 VEPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCAAKGNLKALKVLLKYNPDLTNIRDSD 105 (419)
Q Consensus 26 ~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~ 105 (419)
...| .||||.|| . .|+.+++++|++.| .+++..|..|.||||+|+..|+.+++++|+++|++ ++.++..
T Consensus 11 ~~~~-~t~l~~A~-~------~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~ 79 (136)
T 2jab_A 11 GSDL-GKKLLEAA-R------AGQDDEVRILMANG--ADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGAD-VNAVDAI 79 (136)
T ss_dssp -CHH-HHHHHHHH-H------HTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTT
T ss_pred cccc-cHHHHHHH-H------hCCHHHHHHHHHcC--CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCC
Confidence 5567 99999999 9 99999999999999 89999999999999999999999999999999999 7999999
Q ss_pred CchHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhhC
Q 014730 106 GYLPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLIAANLYDVALDLLKLH 163 (419)
Q Consensus 106 g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~ 163 (419)
|.||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|++.|
T Consensus 80 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 80 GFTPLHLAAFIGHLEIAEVLLKHGADVNA-QDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCcC-cCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 99999999999999999999999999999 9999999999999999999999999875
No 85
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.91 E-value=2.7e-25 Score=190.50 Aligned_cols=147 Identities=11% Similarity=0.030 Sum_probs=117.8
Q ss_pred CccCCChHHHHHHHHhCCcccccccC-CCCCccHHHHHHHhhcccCCCchH----HHHHHHHhhCCCccccccCCCCChH
Q 014730 1 MIEKNDWPGVEDFVTNHPDALTAKIV-EPGSKTIFHTIAELLVDDDSDEAT----CLLDKLATKVDPQTLARQDNHGHTA 75 (419)
Q Consensus 1 A~~~g~~~~v~~ll~~~~~~~~~~~~-~~g~~t~L~~A~~~~~~~~~~g~~----~~v~~Ll~~~~~~~~~~~~~~g~t~ 75 (419)
|++.|+.+.++.++... ++.+ + ..| .||||+|+ . .|+. +++++|++.| +++|.+|..|.||
T Consensus 13 Aa~~g~~~~~~~l~~~~---~~~~-~~~~g-~T~Lh~A~-~------~~~~~~~~~iv~~Ll~~G--advn~~d~~g~Tp 78 (186)
T 3t8k_A 13 AAMLGTYEDFLELFEKG---YEDK-ESVLK-SNILYDVL-R------NNNDEARYKISMFLINKG--ADIKSRTKEGTTL 78 (186)
T ss_dssp HHHHSCHHHHHHHHHHS---SSCH-HHHHT-TTHHHHHT-T------CSCHHHHHHHHHHHHHTT--CCSSCCCTTCCCT
T ss_pred HHHcCCHHHHHHHHhcC---cccc-cccCC-CCHHHHHH-H------cCCcchHHHHHHHHHHCC--CCCCCCCCCCCcH
Confidence 56778888888888763 3344 4 568 88888888 7 7754 5888888888 8888888888888
Q ss_pred HHHHHHcCC------HHHHHHHHhcCCCCCccCCCCCc-hHHHHHHHcC-----CHHHHHHHHh-cCCCCccccCCCCCc
Q 014730 76 VIFCAAKGN------LKALKVLLKYNPDLTNIRDSDGY-LPVHNAAYYG-----HKDTFQYLLE-ATNGVDIYRGNDGAM 142 (419)
Q Consensus 76 L~~A~~~g~------~~~~~~Ll~~~~~~~~~~~~~g~-t~L~~A~~~g-----~~~~~~~Ll~-~g~~~~~~~~~~g~t 142 (419)
||+|+..|+ .+++++|+++|++ ++.+|..|. ||||+|+..+ +.+++++|++ .|++++. ++..|.|
T Consensus 79 Lh~a~~~~~~~~~~~~~iv~~Ll~~Gad-in~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~-~d~~G~T 156 (186)
T 3t8k_A 79 FFPLFQGGGNDITGTTELCKIFLEKGAD-ITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLI-KDKWGLT 156 (186)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHTTCC-SSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTC-CCTTSCC
T ss_pred HHHHHHcCCcchhhHHHHHHHHHHCCCC-CCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcc-cCCCCCC
Confidence 888888776 5778888888888 788888888 8888888844 3568888888 8888888 8888888
Q ss_pred HHHHHHHcCcHHHHHHHHhhC
Q 014730 143 VLLFLIAANLYDVALDLLKLH 163 (419)
Q Consensus 143 ~l~~a~~~~~~~~~~~Ll~~~ 163 (419)
|||+|+..|+.+++++|.+..
T Consensus 157 pL~~A~~~~~~~~v~~L~~~~ 177 (186)
T 3t8k_A 157 ALEFVKRCQKPIALKMMEDYI 177 (186)
T ss_dssp HHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHH
Confidence 888888888888888888764
No 86
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.90 E-value=2.1e-24 Score=175.62 Aligned_cols=129 Identities=19% Similarity=0.192 Sum_probs=118.0
Q ss_pred cccCCCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccC
Q 014730 23 AKIVEPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCAAKGNLKALKVLLKYNPDLTNIR 102 (419)
Q Consensus 23 ~~~~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~ 102 (419)
.+ +..| .||||+|+ . .|+.+++++|++.| .+++.+|..|.||||+|+..|+.+++++|+++|++ ++.+
T Consensus 5 ~~-~~~g-~t~L~~A~-~------~~~~~~~~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~ 72 (137)
T 3c5r_A 5 FT-NHRG-ETLLHIAS-I------KGDIPSVEYLLQNG--SDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKAL-VNTT 72 (137)
T ss_dssp CC-CTTC-CCHHHHHH-H------HTCHHHHHHHHHTT--CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCC
T ss_pred Cc-CCCC-CCHHHHHH-H------cCCHHHHHHHHHcC--CCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCc-ccCc
Confidence 44 8889 99999999 9 99999999999999 89999999999999999999999999999999999 7999
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhhCC
Q 014730 103 DSDGYLPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLIAANLYDVALDLLKLHP 164 (419)
Q Consensus 103 ~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~ 164 (419)
+..|.||||+|+..|+.+++++|+++|++++. .+..|.||+++|+..+..+++++|.+.+.
T Consensus 73 ~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~~g~tpl~~A~~~~~~~~l~~l~~~~~ 133 (137)
T 3c5r_A 73 GYQNDSPLHDAAKNGHVDIVKLLLSYGASRNA-VNIFGLRPVDYTDDESMKSLLLLPEKNES 133 (137)
T ss_dssp CGGGCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCGGGGCCCHHHHHHHSCC-----
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-CCCCCCCHHHHHhhccHHHHHhhcccccc
Confidence 99999999999999999999999999999999 99999999999999998888887776543
No 87
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.89 E-value=3.4e-24 Score=183.63 Aligned_cols=143 Identities=10% Similarity=-0.041 Sum_probs=129.4
Q ss_pred ccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccC-CCCChHHHHHHHcCCH----HHHHHHHhcCCCCCccCCCC
Q 014730 31 KTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQD-NHGHTAVIFCAAKGNL----KALKVLLKYNPDLTNIRDSD 105 (419)
Q Consensus 31 ~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~-~~g~t~L~~A~~~g~~----~~~~~Ll~~~~~~~~~~~~~ 105 (419)
.++|+.|+ . .|+.+.++.++..+ ++..+ ..|.||||+|+..|+. +++++|+++|++ ++.++..
T Consensus 7 ~~~l~~Aa-~------~g~~~~~~~l~~~~----~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gad-vn~~d~~ 74 (186)
T 3t8k_A 7 YRTVSAAA-M------LGTYEDFLELFEKG----YEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGAD-IKSRTKE 74 (186)
T ss_dssp CSSHHHHH-H------HSCHHHHHHHHHHS----SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCC-SSCCCTT
T ss_pred ccHHHHHH-H------cCCHHHHHHHHhcC----cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCC-CCCCCCC
Confidence 78999999 9 99999999999987 34555 6799999999999975 599999999999 8999999
Q ss_pred CchHHHHHHHcCC------HHHHHHHHhcCCCCccccCCCCC-cHHHHHHHc-----CcHHHHHHHHh-hCCCCCcCCCC
Q 014730 106 GYLPVHNAAYYGH------KDTFQYLLEATNGVDIYRGNDGA-MVLLFLIAA-----NLYDVALDLLK-LHPTIGRDNID 172 (419)
Q Consensus 106 g~t~L~~A~~~g~------~~~~~~Ll~~g~~~~~~~~~~g~-t~l~~a~~~-----~~~~~~~~Ll~-~~~~~~~~~~~ 172 (419)
|.||||+|+..|+ .+++++|+++|++++. ++..|. ||||+|+.. +..+++++|++ .|+++. .+|.
T Consensus 75 g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~-~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~-~~d~ 152 (186)
T 3t8k_A 75 GTTLFFPLFQGGGNDITGTTELCKIFLEKGADITA-LYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLL-IKDK 152 (186)
T ss_dssp CCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSS-CBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTT-CCCT
T ss_pred CCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCc-cCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCc-ccCC
Confidence 9999999999986 6889999999999999 999999 999999984 45679999999 899998 8999
Q ss_pred CCCcHHHHHHhCCCC
Q 014730 173 SRRIVLNTLSQKPYA 187 (419)
Q Consensus 173 ~g~~~l~~a~~~~~~ 187 (419)
.|.||||+|+..+..
T Consensus 153 ~G~TpL~~A~~~~~~ 167 (186)
T 3t8k_A 153 WGLTALEFVKRCQKP 167 (186)
T ss_dssp TSCCHHHHHHTTTCH
T ss_pred CCCCHHHHHHHcCCH
Confidence 999999999987644
No 88
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.89 E-value=3.7e-23 Score=164.91 Aligned_cols=118 Identities=19% Similarity=0.223 Sum_probs=105.3
Q ss_pred CCCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCC
Q 014730 26 VEPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCAAKGNLKALKVLLKYNPDLTNIRDSD 105 (419)
Q Consensus 26 ~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~ 105 (419)
+..| .||||.|+ . .|+.+++++|++.| .+++.+|..|.||||+|+..|+.+++++|+++|++ ++.+|..
T Consensus 4 ~~~~-~~~l~~A~-~------~~~~~~v~~ll~~~--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~d~~ 72 (123)
T 3aaa_C 4 GSMC-DKEFMWAL-K------NGDLDEVKDYVAKG--EDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGAD-INAPDKH 72 (123)
T ss_dssp ---C-HHHHHHHH-H------TTCHHHHHHHHHTT--CCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCC-TTCCCTT
T ss_pred cccc-chHHHHHH-H------cCCHHHHHHHHHcC--CCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCC
Confidence 5567 99999999 9 99999999999999 88999999999999999999999999999999999 7999999
Q ss_pred CchHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHHHcCcHHH
Q 014730 106 GYLPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLIAANLYDV 155 (419)
Q Consensus 106 g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~~~~~ 155 (419)
|.||||+|+..|+.+++++|+++|++++. .+..|.||+|+|...+..++
T Consensus 73 g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~-~~~~g~t~l~~A~~~~~~~l 121 (123)
T 3aaa_C 73 HITPLLSAVYEGHVSCVKLLLSKGADKTV-KGPDGLTAFEATDNQAIKAL 121 (123)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHCCCHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHhCCHHHHHH
Confidence 99999999999999999999999999999 99999999999954444333
No 89
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.89 E-value=9.5e-24 Score=175.78 Aligned_cols=132 Identities=20% Similarity=0.162 Sum_probs=110.5
Q ss_pred CccCCChHHHHHHHHhCCcccccccCCCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCCh-HHHHH
Q 014730 1 MIEKNDWPGVEDFVTNHPDALTAKIVEPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHT-AVIFC 79 (419)
Q Consensus 1 A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t-~L~~A 79 (419)
|++.|+.++|++|+++ +.+++.+ +..| .||||+|+ .|+.+++++|++.| ++++.+|..|.| |||+|
T Consensus 19 A~~~g~~~~v~~Ll~~-g~~~~~~-~~~g-~t~L~~A~--------~~~~~~v~~Ll~~g--~~~~~~d~~g~ttpL~~A 85 (156)
T 1bi7_B 19 AAARGRVEEVRALLEA-GANPNAP-NSYG-RRPIQVMM--------MGSARVAELLLLHG--AEPNCADPATLTRPVHDA 85 (156)
T ss_dssp HHHHTCHHHHHHHHTT-TCCTTCC-CSSS-CCTTTSSC--------TTCHHHHHHHHTTT--CCCCCCCTTTCCCHHHHH
T ss_pred HHHcCCHHHHHHHHHc-CCCCCCC-CCCC-CCHHHHHH--------cCCHHHHHHHHHcC--CCCCCcCCCCCcHHHHHH
Confidence 6788999999999987 8899999 9999 99999976 89999999999999 999999999999 99999
Q ss_pred HHcCCHHHHHHHHhcCCCCCccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHH
Q 014730 80 AAKGNLKALKVLLKYNPDLTNIRDSDGYLPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFL 147 (419)
Q Consensus 80 ~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a 147 (419)
+..|+.+++++|+++|++ ++.++..|.||||+|+..|+.+++++|+++|++++. .+..|.||.+.+
T Consensus 86 ~~~~~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~-~~~~g~t~~~~~ 151 (156)
T 1bi7_B 86 AREGFLDTLVVLHRAGAR-LDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRG-SNHARIDAAEGP 151 (156)
T ss_dssp HHHTCHHHHHHHHHHTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC------------------
T ss_pred HHCCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCc-cCcCcCcccccC
Confidence 999999999999999999 799999999999999999999999999999999999 999999987633
No 90
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.88 E-value=8.9e-24 Score=180.90 Aligned_cols=137 Identities=20% Similarity=0.152 Sum_probs=117.4
Q ss_pred cCCCchHHHHHHHHhhCCCcc---------ccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCchHHHHHH
Q 014730 44 DDSDEATCLLDKLATKVDPQT---------LARQDNHGHTAVIFCAAKGNLKALKVLLKYNPDLTNIRDSDGYLPVHNAA 114 (419)
Q Consensus 44 ~~~~g~~~~v~~Ll~~~~~~~---------~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~ 114 (419)
|++.|..+++++|+..+.... ....+..|.||||.|+..|+.+++++|++ +.+ ++.++..|.||||+|+
T Consensus 7 aa~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~-~~~~d~~g~t~L~~A~ 84 (183)
T 3deo_A 7 GSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVSEYETPWWTAARKADEQALSQLLE-DRD-VDAVDENGRTALLFVA 84 (183)
T ss_dssp EEEEETTTEEEEEEEETTCCCCEEEEGGGSCHHHHHHHHHHHHHHHHTTCHHHHHHHTT-TSC-TTCCCTTSCCHHHHHH
T ss_pred HHHhcCCchhHHHHHHhCCCCccccchhcccccCCCCCCCHHHHHHHcCCHHHHHHHHh-cCC-CCCcCCCCCCHHHHHH
Confidence 344566666666665431111 11235688999999999999999999999 888 7999999999999999
Q ss_pred HcCCHHHHHHHHhcCCCCccccC-CCCCcHHHHHHHcCcHHHHHHHHhhCCCCCcCCCCCCCcHHHHHHhC
Q 014730 115 YYGHKDTFQYLLEATNGVDIYRG-NDGAMVLLFLIAANLYDVALDLLKLHPTIGRDNIDSRRIVLNTLSQK 184 (419)
Q Consensus 115 ~~g~~~~~~~Ll~~g~~~~~~~~-~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~ 184 (419)
..|+.+++++|+++|++++. .+ ..|.||||+|+..|+.+++++|++.|+++. .+|..|.||||+|+..
T Consensus 85 ~~~~~~~v~~Ll~~ga~~~~-~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~-~~d~~g~tpl~~A~~~ 153 (183)
T 3deo_A 85 GLGSDKCVRLLAEAGADLDH-RDMRGGLTALHMAAGYVRPEVVEALVELGADIE-VEDERGLTALELAREI 153 (183)
T ss_dssp HHTCHHHHHHHHHTTCCTTC-CCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCTT-CCCTTSCCHHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCCCc-CCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCc-CCCCCCCCHHHHHHHh
Confidence 99999999999999999998 77 899999999999999999999999999988 8999999999999873
No 91
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.88 E-value=4e-23 Score=182.48 Aligned_cols=130 Identities=18% Similarity=0.185 Sum_probs=116.3
Q ss_pred CCCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHHHcCCHHHHHHHHhc-CCCCCccCCC
Q 014730 26 VEPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCAAKGNLKALKVLLKY-NPDLTNIRDS 104 (419)
Q Consensus 26 ~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~-~~~~~~~~~~ 104 (419)
+..| .||||+|| . .|+.+++++|++.| .+++.+|..|.||||+||..|+.+++++|+++ |++ ++.++.
T Consensus 70 ~~~g-~t~L~~A~-~------~g~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~-~~~~d~ 138 (222)
T 3ehr_A 70 AESI-DNPLHEAA-K------RGNLSWLRECLDNR--VGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIE-LNQQNK 138 (222)
T ss_dssp EEEE-SCHHHHHH-H------HTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCC-CCCCCT
T ss_pred cccc-cccccccc-c------cCcHHHHHHHHhCC--CCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCC-ccccCC
Confidence 5678 99999999 9 99999999999999 89999999999999999999999999999999 888 899999
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhhCCCCC
Q 014730 105 DGYLPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLIAANLYDVALDLLKLHPTIG 167 (419)
Q Consensus 105 ~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~ 167 (419)
.|.||||+|+..|+.+++++|+++|++++. .+..|.|||++|+..+..++++.|+..++...
T Consensus 139 ~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~-~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~ 200 (222)
T 3ehr_A 139 LGDTALHAAAWKGYADIVQLLLAKGARTDL-RNIEKKLAFDMATNAACASLLKKKQGTDAVRT 200 (222)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHHTCCSCC-CCTTSCCHHHHCCSHHHHHHHC----------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCcc-ccCCCCCHHHHhcchhHHHHHHHHhccchhhh
Confidence 999999999999999999999999999999 99999999999999999999999999987654
No 92
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.88 E-value=2e-22 Score=163.69 Aligned_cols=116 Identities=22% Similarity=0.180 Sum_probs=110.9
Q ss_pred CccCCChHHHHHHHHhCCcccccccCCCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHH
Q 014730 1 MIEKNDWPGVEDFVTNHPDALTAKIVEPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCA 80 (419)
Q Consensus 1 A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~ 80 (419)
|+..|+.++++.|++. +.+++.+ |..| .||||+|| . .|+.+++++|++.| ++++.+|..|.||||+|+
T Consensus 21 A~~~g~~~~v~~Ll~~-g~~~~~~-~~~g-~t~L~~A~-~------~~~~~~v~~Ll~~g--~~~~~~d~~g~t~L~~A~ 88 (136)
T 2jab_A 21 AARAGQDDEVRILMAN-GADVNAK-DEYG-LTPLYLAT-A------HGHLEIVEVLLKNG--ADVNAVDAIGFTPLHLAA 88 (136)
T ss_dssp HHHHTCHHHHHHHHHT-TCCTTCC-CTTS-CCHHHHHH-H------HTCHHHHHHHHHTT--CCTTCCCTTCCCHHHHHH
T ss_pred HHHhCCHHHHHHHHHc-CCCCCCc-CCCC-CCHHHHHH-H------cCCHHHHHHHHHcC--CCCCcCCCCCCCHHHHHH
Confidence 6789999999999988 8889998 9999 99999999 9 99999999999999 999999999999999999
Q ss_pred HcCCHHHHHHHHhcCCCCCccCCCCCchHHHHHHHcCCHHHHHHHHhcC
Q 014730 81 AKGNLKALKVLLKYNPDLTNIRDSDGYLPVHNAAYYGHKDTFQYLLEAT 129 (419)
Q Consensus 81 ~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g 129 (419)
..|+.+++++|+++|++ ++.++..|.||||+|+..|+.+++++|++.|
T Consensus 89 ~~~~~~~v~~Ll~~g~~-~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 89 FIGHLEIAEVLLKHGAD-VNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HcCCHHHHHHHHHcCCC-CcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 99999999999999999 7999999999999999999999999999986
No 93
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.88 E-value=1.9e-23 Score=178.83 Aligned_cols=113 Identities=24% Similarity=0.310 Sum_probs=106.9
Q ss_pred CCCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCC-C
Q 014730 26 VEPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCAAKGNLKALKVLLKYNPDLTNIRD-S 104 (419)
Q Consensus 26 ~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~-~ 104 (419)
+..| .||||.|+ . .|+.++++.|++ | .+++.+|..|.||||+|+..|+.+++++|+++|++ ++.++ .
T Consensus 41 ~~~g-~t~L~~A~-~------~g~~~~v~~Ll~-~--~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~ 108 (183)
T 3deo_A 41 VSEY-ETPWWTAA-R------KADEQALSQLLE-D--RDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGAD-LDHRDMR 108 (183)
T ss_dssp HHHH-HHHHHHHH-H------TTCHHHHHHHTT-T--SCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCSS
T ss_pred CCCC-CCHHHHHH-H------cCCHHHHHHHHh-c--CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCC
Confidence 4578 99999999 9 999999999999 8 89999999999999999999999999999999999 78887 8
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHHHcC
Q 014730 105 DGYLPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLIAAN 151 (419)
Q Consensus 105 ~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~ 151 (419)
.|.||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..+
T Consensus 109 ~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~-~d~~g~tpl~~A~~~~ 154 (183)
T 3deo_A 109 GGLTALHMAAGYVRPEVVEALVELGADIEV-EDERGLTALELAREIL 154 (183)
T ss_dssp SSCCHHHHHHHTTCHHHHHHHHHHTCCTTC-CCTTSCCHHHHHHHHH
T ss_pred CCCCHHHHHHhcCcHHHHHHHHHcCCCCcC-CCCCCCCHHHHHHHhc
Confidence 899999999999999999999999999999 9999999999998753
No 94
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.88 E-value=2e-22 Score=163.65 Aligned_cols=119 Identities=13% Similarity=0.112 Sum_probs=114.1
Q ss_pred ccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccCCC-CC
Q 014730 63 QTLARQDNHGHTAVIFCAAKGNLKALKVLLKYNPDLTNIRDSDGYLPVHNAAYYGHKDTFQYLLEATNGVDIYRGND-GA 141 (419)
Q Consensus 63 ~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~-g~ 141 (419)
.+++..+..|.||||.|+..|+.+++++|+++|++ ++.++..|.||||+|+. |+.+++++|+++|++++. .+.. |.
T Consensus 3 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~-~~~~~g~ 79 (136)
T 1d9s_A 3 PGIHMLGGSSDAGLATAAARGQVETVRQLLEAGAD-PNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNC-ADPATLT 79 (136)
T ss_dssp CCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSC-CBTTTTB
T ss_pred CCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCC-cCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCC-cCCCCCC
Confidence 67899999999999999999999999999999999 79999999999999999 999999999999999999 8888 99
Q ss_pred cHHHHHHHcCcHHHHHHHHhhCCCCCcCCCCCCCcHHHHHHhCC
Q 014730 142 MVLLFLIAANLYDVALDLLKLHPTIGRDNIDSRRIVLNTLSQKP 185 (419)
Q Consensus 142 t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~~ 185 (419)
||||+|+..|+.+++++|++.|+++. .+|..|.||||+|+..+
T Consensus 80 t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~d~~g~tpl~~A~~~~ 122 (136)
T 1d9s_A 80 RPVHDAAREGFLDTLVVLHRAGARLD-VCDAWGRLPVDLAEEQG 122 (136)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTCCCCC-CCSSSSSCHHHHHHHHT
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCC-ccCCCCCCHHHHHHHcC
Confidence 99999999999999999999999987 89999999999999864
No 95
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.88 E-value=2.6e-22 Score=185.33 Aligned_cols=137 Identities=12% Similarity=0.099 Sum_probs=124.3
Q ss_pred ccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccc------cCCCCChHHHHHHHc---CCHHHHHHHHhcCCCCCcc
Q 014730 31 KTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLAR------QDNHGHTAVIFCAAK---GNLKALKVLLKYNPDLTNI 101 (419)
Q Consensus 31 ~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~------~~~~g~t~L~~A~~~---g~~~~~~~Ll~~~~~~~~~ 101 (419)
.++|+.|+ . .|+.+.++.|+..| .+++. .+..|.||||+|+.. |+.+++++|+++|++ ++.
T Consensus 152 ~~~L~~A~-~------~g~~~~v~~ll~~g--~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gad-vn~ 221 (301)
T 2b0o_E 152 PQRLWTAI-C------NRDLLSVLEAFANG--QDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH-LDA 221 (301)
T ss_dssp HHHHHHHH-H------TTCHHHHHHHHHTT--CCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSC-TTC
T ss_pred HHHHhhhh-h------ccCHHHHHHHHhcC--CcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCC-CCC
Confidence 67899999 9 99999999999999 88887 688999999999997 899999999999999 799
Q ss_pred CCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhhCCCCCcCCCCCCCcHHHHH
Q 014730 102 RDSDGYLPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLIAANLYDVALDLLKLHPTIGRDNIDSRRIVLNTL 181 (419)
Q Consensus 102 ~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a 181 (419)
+|..|.||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|++.|++ .|.||||+|
T Consensus 222 ~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~-~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~-------~g~tpLh~A 293 (301)
T 2b0o_E 222 KAADGNTALHYAALYNQPDCLKLLLKGRALVGT-VNEAGETALDIARKKHHKECEELLEQAQAG-------TFAFPLHVD 293 (301)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSC-CCTTSCCHHHHHHHHTCHHHHHHHHHHHHH-------TTSSCCC--
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHhcCC-------CCCChhHHH
Confidence 999999999999999999999999999999999 999999999999999999999999998864 478999999
Q ss_pred HhCC
Q 014730 182 SQKP 185 (419)
Q Consensus 182 ~~~~ 185 (419)
+..+
T Consensus 294 ~~~g 297 (301)
T 2b0o_E 294 YSWV 297 (301)
T ss_dssp ----
T ss_pred HhcC
Confidence 8764
No 96
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.87 E-value=4.2e-22 Score=161.93 Aligned_cols=118 Identities=19% Similarity=0.244 Sum_probs=110.7
Q ss_pred ccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCc
Q 014730 63 QTLARQDNHGHTAVIFCAAKGNLKALKVLLKYNPDLTNIRDSDGYLPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAM 142 (419)
Q Consensus 63 ~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t 142 (419)
.++ .+|..|.||||+|+..|+.+++++|+++|++ ++.++..|.||||+|+..|+.+++++|+++|++++. .+..|.|
T Consensus 2 ~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t 78 (137)
T 3c5r_A 2 IDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSD-PNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNT-TGYQNDS 78 (137)
T ss_dssp --C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCGGGCC
T ss_pred CCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccC-cCCCCCC
Confidence 445 6789999999999999999999999999999 799999999999999999999999999999999999 9999999
Q ss_pred HHHHHHHcCcHHHHHHHHhhCCCCCcCCCCCCCcHHHHHHhC
Q 014730 143 VLLFLIAANLYDVALDLLKLHPTIGRDNIDSRRIVLNTLSQK 184 (419)
Q Consensus 143 ~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~~ 184 (419)
|||+|+..|+.+++++|++.|+++. .+|..|.||+++|+..
T Consensus 79 ~L~~A~~~~~~~~v~~Ll~~ga~~~-~~~~~g~tpl~~A~~~ 119 (137)
T 3c5r_A 79 PLHDAAKNGHVDIVKLLLSYGASRN-AVNIFGLRPVDYTDDE 119 (137)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTSCCGGGGCCCH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCC-CCCCCCCCHHHHHhhc
Confidence 9999999999999999999999987 8999999999998753
No 97
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.87 E-value=8.9e-22 Score=157.10 Aligned_cols=118 Identities=26% Similarity=0.355 Sum_probs=112.8
Q ss_pred CccCCChHHHHHHHHhCCcccccccCCCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHH
Q 014730 1 MIEKNDWPGVEDFVTNHPDALTAKIVEPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCA 80 (419)
Q Consensus 1 A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~ 80 (419)
|++.|+.+++++|++. +.+++.+ +..| .||||+|+ . .|+.+++++|++.| .+++.+|..|.||||+|+
T Consensus 9 A~~~~~~~~v~~Ll~~-~~~~~~~-~~~g-~t~L~~A~-~------~~~~~~~~~Ll~~g--~~~~~~~~~g~t~l~~A~ 76 (126)
T 1n0r_A 9 AARNGHLEVVKLLLEA-GADVNAK-DKNG-RTPLHLAA-R------NGHLEVVKLLLEAG--ADVNAKDKNGRTPLHLAA 76 (126)
T ss_dssp HHHHTCHHHHHHHHHH-TCCTTCC-CTTS-CCHHHHHH-H------HTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHH
T ss_pred HHHcCcHHHHHHHHHc-CCCCCCc-CCCC-CcHHHHHH-H------cCcHHHHHHHHHcC--CCCcccCCCCCcHHHHHH
Confidence 6788999999999998 7888888 9999 99999999 9 99999999999999 899999999999999999
Q ss_pred HcCCHHHHHHHHhcCCCCCccCCCCCchHHHHHHHcCCHHHHHHHHhcCCC
Q 014730 81 AKGNLKALKVLLKYNPDLTNIRDSDGYLPVHNAAYYGHKDTFQYLLEATNG 131 (419)
Q Consensus 81 ~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~ 131 (419)
..|+.+++++|+++|++ ++.++..|.||||+|+..|+.+++++|+++|++
T Consensus 77 ~~~~~~~~~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 77 RNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HcChHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 99999999999999999 799999999999999999999999999999985
No 98
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.87 E-value=7.5e-22 Score=176.93 Aligned_cols=137 Identities=19% Similarity=0.102 Sum_probs=116.9
Q ss_pred ccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCchHH
Q 014730 31 KTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCAAKGNLKALKVLLKYNPDLTNIRDSDGYLPV 110 (419)
Q Consensus 31 ~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~L 110 (419)
.+++.+++ . .|+.+.+..+...+ ...+..|.||||.|+..|+.+++++|++ +.+ ++.++..|.|||
T Consensus 16 ~~~~l~~~-~------~g~~~~~~~~~~~~-----~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~-~~~~d~~g~t~L 81 (244)
T 3ui2_A 16 AMEYLIEW-K------DGHSPSWVPSSYIA-----ADVVSEYETPWWTAARKADEQALSQLLE-DRD-VDAVDENGRTAL 81 (244)
T ss_dssp EEEEEEEE-S------SCCCCEEEEGGGSC-----HHHHHHHHHHHHHHHTTTCHHHHHHTTT-TCC-TTCBCTTSCBHH
T ss_pred ccHHHHHH-H------cCCCcccccccccc-----cccccCCCCHHHHHHHcCCHHHHHHHHc-CCC-CCCcCCCCCCHH
Confidence 44444544 4 55555444433333 2234578999999999999999999999 888 799999999999
Q ss_pred HHHHHcCCHHHHHHHHhcCCCCccccC-CCCCcHHHHHHHcCcHHHHHHHHhhCCCCCcCCCCCCCcHHHHHHh
Q 014730 111 HNAAYYGHKDTFQYLLEATNGVDIYRG-NDGAMVLLFLIAANLYDVALDLLKLHPTIGRDNIDSRRIVLNTLSQ 183 (419)
Q Consensus 111 ~~A~~~g~~~~~~~Ll~~g~~~~~~~~-~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~~ 183 (419)
|+|+..|+.+++++|+++|++++. .+ ..|.||||+|+..|+.+++++|++.|+++. .+|..|.||||+|+.
T Consensus 82 ~~A~~~g~~~~v~~Ll~~ga~~~~-~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~~d~~g~t~l~~A~~ 153 (244)
T 3ui2_A 82 LFVAGLGSDKCVRLLAEAGADLDH-RDMRGGLTALHMAAGYVRPEVVEALVELGADIE-VEDERGLTALELARE 153 (244)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTC-CCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHcCCCCCc-CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-CCCCCCCcHHHHHHH
Confidence 999999999999999999999998 77 889999999999999999999999999988 899999999999976
No 99
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.87 E-value=9.5e-23 Score=182.77 Aligned_cols=111 Identities=24% Similarity=0.327 Sum_probs=105.0
Q ss_pred CCCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCC-C
Q 014730 26 VEPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCAAKGNLKALKVLLKYNPDLTNIRD-S 104 (419)
Q Consensus 26 ~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~-~ 104 (419)
+..| .||||+|| . .|+.+++++|++ | .+++.+|..|.||||+||..|+.+++++|+++|++ ++.++ .
T Consensus 42 ~~~g-~t~L~~A~-~------~g~~~~v~~Ll~-~--~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~ 109 (244)
T 3ui2_A 42 VSEY-ETPWWTAA-R------KADEQALSQLLE-D--RDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGAD-LDHRDMR 109 (244)
T ss_dssp HHHH-HHHHHHHH-T------TTCHHHHHHTTT-T--CCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC-TTCCCSS
T ss_pred ccCC-CCHHHHHH-H------cCCHHHHHHHHc-C--CCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCcCCCC
Confidence 4568 99999999 9 999999999999 8 89999999999999999999999999999999999 78887 7
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHHH
Q 014730 105 DGYLPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLIA 149 (419)
Q Consensus 105 ~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~ 149 (419)
.|.||||+|+..|+.+++++|+++|++++. .+..|.||||+|+.
T Consensus 110 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-~d~~g~t~l~~A~~ 153 (244)
T 3ui2_A 110 GGLTALHMAAGYVRPEVVEALVELGADIEV-EDERGLTALELARE 153 (244)
T ss_dssp SCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTCCCHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCcHHHHHHH
Confidence 899999999999999999999999999999 99999999999974
No 100
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.86 E-value=2.9e-21 Score=153.82 Aligned_cols=111 Identities=15% Similarity=0.153 Sum_probs=104.6
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHH
Q 014730 69 DNHGHTAVIFCAAKGNLKALKVLLKYNPDLTNIRDSDGYLPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLI 148 (419)
Q Consensus 69 ~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~ 148 (419)
+..|.||||.|+..|+.+++++|++.+++ ++.++..|.||||+|+..|+.+++++|++.|++++. .+..|.||||+|+
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~d~~g~tpL~~A~ 81 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGED-VNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA-PDKHHITPLLSAV 81 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCC-TTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTC-CCTTSCCHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCC-cCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCc-CCCCCCCHHHHHH
Confidence 46788999999999999999999999998 799999999999999999999999999999999999 9999999999999
Q ss_pred HcCcHHHHHHHHhhCCCCCcCCCCCCCcHHHHHH
Q 014730 149 AANLYDVALDLLKLHPTIGRDNIDSRRIVLNTLS 182 (419)
Q Consensus 149 ~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l~~a~ 182 (419)
..++.+++++|++.|+++. .+|..|.||+++|.
T Consensus 82 ~~~~~~~v~~Ll~~ga~~~-~~~~~g~t~l~~A~ 114 (123)
T 3aaa_C 82 YEGHVSCVKLLLSKGADKT-VKGPDGLTAFEATD 114 (123)
T ss_dssp HHTCHHHHHHHHHTTCCTT-CCCTTSCCHHHHCC
T ss_pred HcCCHHHHHHHHHcCCCCC-CcCCCCCCHHHHhC
Confidence 9999999999999999987 89999999999984
No 101
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.86 E-value=4.6e-22 Score=183.73 Aligned_cols=133 Identities=20% Similarity=0.161 Sum_probs=116.9
Q ss_pred CccCCChHHHHHHHHhCCccccc------ccCCCCCccHHHHHHHhhcccCCC---chHHHHHHHHhhCCCccccccCCC
Q 014730 1 MIEKNDWPGVEDFVTNHPDALTA------KIVEPGSKTIFHTIAELLVDDDSD---EATCLLDKLATKVDPQTLARQDNH 71 (419)
Q Consensus 1 A~~~g~~~~v~~ll~~~~~~~~~------~~~~~g~~t~L~~A~~~~~~~~~~---g~~~~v~~Ll~~~~~~~~~~~~~~ 71 (419)
|+..|+.+.|+.|++. +.+++. + +..| .||||+|+ . . |+.+++++|++.| ++++.+|..
T Consensus 158 A~~~g~~~~v~~ll~~-g~d~~~~~~~~~~-~~~g-~t~Lh~A~-~------~~~~~~~~iv~~Ll~~g--advn~~d~~ 225 (301)
T 2b0o_E 158 AICNRDLLSVLEAFAN-GQDFGQPLPGPDA-QAPE-ELVLHLAV-K------VANQASLPLVDFIIQNG--GHLDAKAAD 225 (301)
T ss_dssp HHHTTCHHHHHHHHHT-TCCTTSCEECSSS-CSCE-ECHHHHHH-H------TCCTTTHHHHHHHHHHS--SCTTCCCTT
T ss_pred hhhccCHHHHHHHHhc-CCcccccCCCccc-CCCC-ccHHHHHH-H------hcccCcHHHHHHHHhcC--CCCCCCCCC
Confidence 5789999999999977 778877 5 8889 99999999 8 7 8999999999999 999999999
Q ss_pred CChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHHHcC
Q 014730 72 GHTAVIFCAAKGNLKALKVLLKYNPDLTNIRDSDGYLPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLIAAN 151 (419)
Q Consensus 72 g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~ 151 (419)
|.||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|++.|++ .|.||||+|+..|
T Consensus 226 G~TpLh~A~~~g~~~~v~~Ll~~gad-~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~-------~g~tpLh~A~~~g 297 (301)
T 2b0o_E 226 GNTALHYAALYNQPDCLKLLLKGRAL-VGTVNEAGETALDIARKKHHKECEELLEQAQAG-------TFAFPLHVDYSWV 297 (301)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCC-CSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH-------TTSSCCC------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC-------CCCChhHHHHhcC
Confidence 99999999999999999999999999 899999999999999999999999999999863 5789999999887
Q ss_pred cH
Q 014730 152 LY 153 (419)
Q Consensus 152 ~~ 153 (419)
+.
T Consensus 298 ~~ 299 (301)
T 2b0o_E 298 IS 299 (301)
T ss_dssp --
T ss_pred Cc
Confidence 63
No 102
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.84 E-value=8e-21 Score=143.33 Aligned_cols=91 Identities=30% Similarity=0.424 Sum_probs=68.7
Q ss_pred ccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCchHH
Q 014730 31 KTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCAAKGNLKALKVLLKYNPDLTNIRDSDGYLPV 110 (419)
Q Consensus 31 ~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~L 110 (419)
.||||+|+ . .|+.+++++|++.| .+++.+|..|.||||+|+..|+.+++++|+++|++ ++.+|..|.|||
T Consensus 3 ~t~L~~A~-~------~~~~~~v~~Ll~~g--~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~d~~g~t~l 72 (93)
T 1n0q_A 3 RTPLHLAA-R------NGHLEVVKLLLEAG--ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPL 72 (93)
T ss_dssp CCHHHHHH-H------HTCHHHHHHHHHTT--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHH
T ss_pred CcHHHHHH-H------cCCHHHHHHHHHcC--CCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHH
Confidence 77777777 7 77777777777777 77777777777777777777777777777777777 677777777777
Q ss_pred HHHHHcCCHHHHHHHHhcCCC
Q 014730 111 HNAAYYGHKDTFQYLLEATNG 131 (419)
Q Consensus 111 ~~A~~~g~~~~~~~Ll~~g~~ 131 (419)
|+|+..|+.+++++|+++|++
T Consensus 73 ~~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 73 HLAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp HHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHHHcCCHHHHHHHHHcCCC
Confidence 777777777777777777753
No 103
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.84 E-value=1.1e-20 Score=178.50 Aligned_cols=145 Identities=16% Similarity=0.156 Sum_probs=119.3
Q ss_pred CCCccHHHHHHHhhcccCCC-chHHHHHHHHhhCCCccccccC--CCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCC
Q 014730 28 PGSKTIFHTIAELLVDDDSD-EATCLLDKLATKVDPQTLARQD--NHGHTAVIFCAAKGNLKALKVLLKYNPDLTNIRDS 104 (419)
Q Consensus 28 ~g~~t~L~~A~~~~~~~~~~-g~~~~v~~Ll~~~~~~~~~~~~--~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~ 104 (419)
.+ .|+||.|+ . . |+.++++.|++.| ++++..+ ..|.||||+|+..|+.+++++|+++|++ ++.+|.
T Consensus 198 ~~-~t~L~~Aa-~------~~g~~~~v~~LL~~G--advn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gad-vn~~d~ 266 (368)
T 3jue_A 198 HP-GALLFRAS-G------HPPSLPTMADALAHG--ADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGAN-VNQADS 266 (368)
T ss_dssp CH-HHHHHHHT-S------SSCCHHHHHHHHHTT--CCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCT
T ss_pred CC-CcHHHHHH-H------ccCCHHHHHHHHHcC--CCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCCCCC
Confidence 45 68999999 8 8 9999999999999 8999888 8999999999999999999999999999 899999
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhhCCCCC--cCCCCCCCcHHHHHH
Q 014730 105 DGYLPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLIAANLYDVALDLLKLHPTIG--RDNIDSRRIVLNTLS 182 (419)
Q Consensus 105 ~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~--~~~~~~g~~~l~~a~ 182 (419)
.|.||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..++.+++++|+..+.... ...+..+.++++.+.
T Consensus 267 ~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~-~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~ 345 (368)
T 3jue_A 267 AGRGPLHHATILGHTGLACLFLKRGADLGA-RDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFR 345 (368)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHHHC--------------------
T ss_pred CCCCHHHHHHHcCcHHHHHHHHHCcCCCCC-cCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHH
Confidence 999999999999999999999999999999 99999999999999999999999998763321 134566778887765
Q ss_pred hC
Q 014730 183 QK 184 (419)
Q Consensus 183 ~~ 184 (419)
..
T Consensus 346 ~~ 347 (368)
T 3jue_A 346 DF 347 (368)
T ss_dssp --
T ss_pred HH
Confidence 54
No 104
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.84 E-value=1.9e-20 Score=141.26 Aligned_cols=93 Identities=30% Similarity=0.449 Sum_probs=88.5
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHHHc
Q 014730 71 HGHTAVIFCAAKGNLKALKVLLKYNPDLTNIRDSDGYLPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLIAA 150 (419)
Q Consensus 71 ~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~ 150 (419)
+|.||||+|+..|+.+++++|+++|++ ++.++..|.||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~d~~g~t~l~~A~~~ 78 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA-KDKNGRTPLHLAARN 78 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc-cCCCCCCHHHHHHHc
Confidence 489999999999999999999999999 799999999999999999999999999999999999 999999999999999
Q ss_pred CcHHHHHHHHhhCCC
Q 014730 151 NLYDVALDLLKLHPT 165 (419)
Q Consensus 151 ~~~~~~~~Ll~~~~~ 165 (419)
|+.+++++|++.|++
T Consensus 79 ~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 79 GHLEVVKLLLEAGAY 93 (93)
T ss_dssp TCHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHcCCC
Confidence 999999999999864
No 105
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.84 E-value=1.6e-20 Score=171.48 Aligned_cols=125 Identities=12% Similarity=0.092 Sum_probs=117.4
Q ss_pred ccHHHHHHHhhcccCCCchHHHHHHHHhhCCCcc------ccccCCCCChHHHHHHHc---CCHHHHHHHHhcCCCCCcc
Q 014730 31 KTIFHTIAELLVDDDSDEATCLLDKLATKVDPQT------LARQDNHGHTAVIFCAAK---GNLKALKVLLKYNPDLTNI 101 (419)
Q Consensus 31 ~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~------~~~~~~~g~t~L~~A~~~---g~~~~~~~Ll~~~~~~~~~ 101 (419)
.++|+.|+ . .|+.+.++.+++.| .+ ++..|..|.||||+|+.. |+.+++++|+++|++ ++.
T Consensus 131 l~~l~~a~-~------~~d~~~~~~ll~~g--~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~-in~ 200 (278)
T 1dcq_A 131 LHSLCEAV-K------TRDIFGLLQAYADG--VDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGN-LDK 200 (278)
T ss_dssp HHHHHHHH-H------TTCHHHHHHHHHTT--CCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSC-TTC
T ss_pred hhhhhhHh-h------hcccHHHHHHHHhh--cchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCC-ccc
Confidence 57899999 9 99999999999999 66 445588999999999999 899999999999999 899
Q ss_pred CCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhhCCCC
Q 014730 102 RDSDGYLPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLIAANLYDVALDLLKLHPTI 166 (419)
Q Consensus 102 ~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~ 166 (419)
+|..|.||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|++.|+..
T Consensus 201 ~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~-~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 201 QTGKGSTALHYCCLTDNAECLKLLLRGKASIEI-ANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-ccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 999999999999999999999999999999999 9999999999999999999999999998753
No 106
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.83 E-value=1.9e-20 Score=185.16 Aligned_cols=126 Identities=13% Similarity=0.124 Sum_probs=118.5
Q ss_pred ccHHHHHHHhhcccCCCchHHHHHHHHhhCCCcccccc------CCCCChHHHHHHH---cCCHHHHHHHHhcCCCCCcc
Q 014730 31 KTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQ------DNHGHTAVIFCAA---KGNLKALKVLLKYNPDLTNI 101 (419)
Q Consensus 31 ~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~------~~~g~t~L~~A~~---~g~~~~~~~Ll~~~~~~~~~ 101 (419)
.+.||.|+ . .|+.+.++.|++.| +++|.. |..|.||||+||. .|+.+++++|+++|++ ++.
T Consensus 133 ~~~L~~A~-~------~g~~~~v~~ll~~g--~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~-vn~ 202 (497)
T 3lvq_E 133 PQRLWTAI-C------NRDLLSVLEAFANG--QDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH-LDA 202 (497)
T ss_dssp HHHHHHHH-H------HTCHHHHHHHHHTT--CCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCC-TTC
T ss_pred HHHHHHHH-h------ccCHHHHHHHHhhc--ccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCC-CCc
Confidence 57899999 9 99999999999999 888877 8899999999976 8999999999999999 899
Q ss_pred CCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHHHHHcCcHHHHHHHHhhCCCCC
Q 014730 102 RDSDGYLPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLFLIAANLYDVALDLLKLHPTIG 167 (419)
Q Consensus 102 ~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~ 167 (419)
+|..|.||||+|+..|+.+++++|+++|++++. .+..|.||||+|+..|+.+++++|++.|+++.
T Consensus 203 ~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~-~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~ 267 (497)
T 3lvq_E 203 KAADGNTALHYAALYNQPDCLKLLLKGRALVGT-VNEAGETALDIARKKHHKECEELLEQAQAGTF 267 (497)
T ss_dssp CCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCSC-CCTTCCCHHHHHHHTTCHHHHHHHHHTCC---
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCC
Confidence 999999999999999999999999999999999 99999999999999999999999999999876
No 107
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.82 E-value=1.4e-20 Score=147.94 Aligned_cols=107 Identities=25% Similarity=0.332 Sum_probs=91.4
Q ss_pred CCCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCC
Q 014730 26 VEPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCAAKGNLKALKVLLKYNPDLTNIRDSD 105 (419)
Q Consensus 26 ~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~ 105 (419)
|.+| .||||+|| . .|+.+++++|++.| .+++.+|..|.||||+|+..|+.+++++|+++|++ ++.++..
T Consensus 6 d~~g-~t~L~~A~-~------~~~~~~~~~Ll~~g--~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~d~~ 74 (115)
T 2l6b_A 6 SKDG-NTPLHNAA-K------NGHAEEVKKLLSKG--ADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGAD-VNARSKD 74 (115)
T ss_dssp SCSS-CCHHHHHH-H------HTCHHHHHHHTTTT--CCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCC-TTCCCTT
T ss_pred CCCC-CCHHHHHH-H------cCCHHHHHHHHHcC--CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-CcccCCC
Confidence 7788 89999999 8 88899999999888 88888888889999999988999999999988888 7888888
Q ss_pred CchHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHH
Q 014730 106 GYLPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVL 144 (419)
Q Consensus 106 g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l 144 (419)
|.||||+|+..|+.+++++|+++|++++. .+..|.+|-
T Consensus 75 g~tpl~~A~~~~~~~~~~~Ll~~ga~~n~-~~~~~~~~~ 112 (115)
T 2l6b_A 75 GNTPEHLAKKNGHHEIVKLLDAKGADVNA-RSWGSSHHH 112 (115)
T ss_dssp CCCTTHHHHTTTCHHHHHHHHTTSSSHHH-HSCCCC---
T ss_pred CCCHHHHHHHCCCHHHHHHHHHcCCCCCc-CCccccccc
Confidence 88999999988899999999999888888 777777763
No 108
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.82 E-value=6.5e-20 Score=167.37 Aligned_cols=119 Identities=24% Similarity=0.342 Sum_probs=110.2
Q ss_pred CccCCChHHHHHHHHhCCccc------ccccCCCCCccHHHHHHHhhcccCCC---chHHHHHHHHhhCCCccccccCCC
Q 014730 1 MIEKNDWPGVEDFVTNHPDAL------TAKIVEPGSKTIFHTIAELLVDDDSD---EATCLLDKLATKVDPQTLARQDNH 71 (419)
Q Consensus 1 A~~~g~~~~v~~ll~~~~~~~------~~~~~~~g~~t~L~~A~~~~~~~~~~---g~~~~v~~Ll~~~~~~~~~~~~~~ 71 (419)
|+..||.+.+..+++. +.++ +.. +..| .||||+|+ . . |+.+++++|++.| +++|.+|..
T Consensus 137 a~~~~d~~~~~~ll~~-g~~~~~~~~l~~~-~~~g-~t~Lh~A~-~------~~~~~~~~~v~~Ll~~g--a~in~~d~~ 204 (278)
T 1dcq_A 137 AVKTRDIFGLLQAYAD-GVDLTEKIPLANG-HEPD-ETALHLAV-R------SVDRTSLHIVDFLVQNS--GNLDKQTGK 204 (278)
T ss_dssp HHHTTCHHHHHHHHHT-TCCTTSBCCCSSC-SSTT-CBHHHHHH-H------HCCTTTHHHHHHHHHHC--SCTTCCCTT
T ss_pred HhhhcccHHHHHHHHh-hcchhhhcccccc-ccCC-CCcchHHH-H------hcccchHHHHHHHHHCC--CCccccCCC
Confidence 5678999999999988 6664 444 7889 99999999 8 7 8999999999999 999999999
Q ss_pred CChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCC
Q 014730 72 GHTAVIFCAAKGNLKALKVLLKYNPDLTNIRDSDGYLPVHNAAYYGHKDTFQYLLEATNGV 132 (419)
Q Consensus 72 g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~ 132 (419)
|.||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|+++|++.
T Consensus 205 g~TpLh~A~~~g~~~~v~~Ll~~gad-~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 205 GSTALHYCCLTDNAECLKLLLRGKAS-IEIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCC-CCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 99999999999999999999999999 8999999999999999999999999999999854
No 109
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.80 E-value=2.1e-20 Score=164.88 Aligned_cols=121 Identities=16% Similarity=0.151 Sum_probs=105.8
Q ss_pred CccCCChHHHHHHHHhCCcccccccCCCCCccHHHHHHHhhcccCCCchHHHHHHHHhh-CCCccccccCCCCChHHHHH
Q 014730 1 MIEKNDWPGVEDFVTNHPDALTAKIVEPGSKTIFHTIAELLVDDDSDEATCLLDKLATK-VDPQTLARQDNHGHTAVIFC 79 (419)
Q Consensus 1 A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~-~~~~~~~~~~~~g~t~L~~A 79 (419)
|+..|+.++|+.|++. +.+++.+ +..| .||||+|| . .|+.+++++|++. | ++++.+|..|.||||+|
T Consensus 80 A~~~g~~~~v~~Ll~~-g~~~~~~-~~~g-~t~L~~A~-~------~~~~~~v~~Ll~~~g--~~~~~~d~~g~tpL~~A 147 (222)
T 3ehr_A 80 AAKRGNLSWLRECLDN-RVGVNGL-DKAG-STALYWAC-H------GGHKDIVEMLFTQPN--IELNQQNKLGDTALHAA 147 (222)
T ss_dssp HHHHTCHHHHHHHHHT-TCCTTCC-CTTS-CCHHHHHH-H------TTCHHHHHHHTTSTT--CCCCCCCTTSCCHHHHH
T ss_pred ccccCcHHHHHHHHhC-CCCcccc-CCCC-CCHHHHHH-H------cCCHHHHHHHHcCCC--CCccccCCCCCCHHHHH
Confidence 5788999999999987 8889998 9999 99999999 9 9999999999999 7 89999999999999999
Q ss_pred HHcCCHHHHHHHHhcCCCCCccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCcc
Q 014730 80 AAKGNLKALKVLLKYNPDLTNIRDSDGYLPVHNAAYYGHKDTFQYLLEATNGVDI 134 (419)
Q Consensus 80 ~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~ 134 (419)
+..|+.+++++|+++|++ ++.++..|.||||+|+..|+.++++.|++.|+....
T Consensus 148 ~~~~~~~~v~~Ll~~ga~-~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~ 201 (222)
T 3ehr_A 148 AWKGYADIVQLLLAKGAR-TDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTL 201 (222)
T ss_dssp HHHTCHHHHHHHHHHTCC-SCCCCTTSCCHHHHCCSHHHHHHHC-----------
T ss_pred HHcCCHHHHHHHHHcCCC-CccccCCCCCHHHHhcchhHHHHHHHHhccchhhhc
Confidence 999999999999999999 799999999999999999999999999999987766
No 110
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.80 E-value=5.2e-20 Score=144.66 Aligned_cols=109 Identities=23% Similarity=0.247 Sum_probs=101.1
Q ss_pred ccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCcHHHH
Q 014730 67 RQDNHGHTAVIFCAAKGNLKALKVLLKYNPDLTNIRDSDGYLPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAMVLLF 146 (419)
Q Consensus 67 ~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t~l~~ 146 (419)
.+|..|.||||+|+..|+.+++++|++++++ ++.++..|.||||+|+..|+.+++++|+++|++++. .+..|.||||+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~d~~g~tpl~~ 81 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGAD-VNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNA-RSKDGNTPEHL 81 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCC-SSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTC-CCTTCCCTTHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcc-cCCCCCCHHHH
Confidence 4688999999999999999999999999999 799999999999999999999999999999999999 99999999999
Q ss_pred HHHcCcHHHHHHHHhhCCCCCcCCCCCCCcHH
Q 014730 147 LIAANLYDVALDLLKLHPTIGRDNIDSRRIVL 178 (419)
Q Consensus 147 a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~~~l 178 (419)
|+..++.+++++|++.|+++. .++..|.+|-
T Consensus 82 A~~~~~~~~~~~Ll~~ga~~n-~~~~~~~~~~ 112 (115)
T 2l6b_A 82 AKKNGHHEIVKLLDAKGADVN-ARSWGSSHHH 112 (115)
T ss_dssp HHTTTCHHHHHHHHTTSSSHH-HHSCCCC---
T ss_pred HHHCCCHHHHHHHHHcCCCCC-cCCccccccc
Confidence 999999999999999999987 6788887774
No 111
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.80 E-value=1.3e-19 Score=179.34 Aligned_cols=125 Identities=20% Similarity=0.184 Sum_probs=110.9
Q ss_pred CccCCChHHHHHHHHhCCcccccc-----cCCCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChH
Q 014730 1 MIEKNDWPGVEDFVTNHPDALTAK-----IVEPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTA 75 (419)
Q Consensus 1 A~~~g~~~~v~~ll~~~~~~~~~~-----~~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~ 75 (419)
|+..|+.+.|+.|++. +.++|.+ .+..| .||||+|| . ++..|+.+++++|++.| +++|.+|..|.||
T Consensus 139 A~~~g~~~~v~~ll~~-g~~~n~~~~~~~~~~~g-~t~Lh~A~-~---~a~~g~~~~v~~Ll~~g--a~vn~~d~~g~Tp 210 (497)
T 3lvq_E 139 AICNRDLLSVLEAFAN-GQDFGQPLPGPDAQAPE-ELVLHLAV-K---VANQASLPLVDFIIQNG--GHLDAKAADGNTA 210 (497)
T ss_dssp HHHHTCHHHHHHHHHT-TCCSSSCBCCSSSCCSC-BCHHHHHH-H---TCCTTTHHHHHHHHHHS--CCTTCCCSSSCCH
T ss_pred HHhccCHHHHHHHHhh-cccccCCCCCccccccc-chHHHHHH-H---hcccccHHHHHHHHHcC--CCCCccCCCCCcH
Confidence 6788999999999988 7777654 26678 99999995 2 22389999999999999 9999999999999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCCccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCcc
Q 014730 76 VIFCAAKGNLKALKVLLKYNPDLTNIRDSDGYLPVHNAAYYGHKDTFQYLLEATNGVDI 134 (419)
Q Consensus 76 L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~ 134 (419)
||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|++.|++++.
T Consensus 211 Lh~A~~~g~~~~v~~Ll~~ga~-~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~ 268 (497)
T 3lvq_E 211 LHYAALYNQPDCLKLLLKGRAL-VGTVNEAGETALDIARKKHHKECEELLEQAQAGTFA 268 (497)
T ss_dssp HHHHTTTTCHHHHHHHHHTCCC-CSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC----
T ss_pred HHHHHHcCCHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC
Confidence 9999999999999999999999 899999999999999999999999999999998766
No 112
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.79 E-value=4.7e-19 Score=167.39 Aligned_cols=136 Identities=15% Similarity=0.088 Sum_probs=111.1
Q ss_pred CccC-CChHHHHHHHHhCCcccccccC--CCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHH
Q 014730 1 MIEK-NDWPGVEDFVTNHPDALTAKIV--EPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVI 77 (419)
Q Consensus 1 A~~~-g~~~~v~~ll~~~~~~~~~~~~--~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~ 77 (419)
|+.. |++++++.|++. +.++|.. + ..| .||||+|| . .|+.+++++|++.| ++++..|..|.||||
T Consensus 206 Aa~~~g~~~~v~~LL~~-Gadvn~~-~~~~~g-~TpLh~Aa-~------~g~~~iv~~LL~~G--advn~~d~~G~TpLh 273 (368)
T 3jue_A 206 ASGHPPSLPTMADALAH-GADVNWV-NGGQDN-ATPLIQAT-A------ANSLLACEFLLQNG--ANVNQADSAGRGPLH 273 (368)
T ss_dssp HTSSSCCHHHHHHHHHT-TCCTTCC-CTTTTC-CCHHHHHH-H------TTCHHHHHHHHHTT--CCTTCCCTTSCCHHH
T ss_pred HHHccCCHHHHHHHHHc-CCCCCcc-ccccCC-CCHHHHHH-H------CCCHHHHHHHHHcC--CCCCCCCCCCCCHHH
Confidence 5667 999999999987 8899988 7 789 99999999 9 99999999999999 999999999999999
Q ss_pred HHHHcCCHHHHHHHHhcCCCCCccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccc--cCCCCCcHHHHHHH
Q 014730 78 FCAAKGNLKALKVLLKYNPDLTNIRDSDGYLPVHNAAYYGHKDTFQYLLEATNGVDIY--RGNDGAMVLLFLIA 149 (419)
Q Consensus 78 ~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~--~~~~g~t~l~~a~~ 149 (419)
+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|++.+...... .+..+.|+++.+..
T Consensus 274 ~A~~~g~~~~v~~LL~~Gad-~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~ 346 (368)
T 3jue_A 274 HATILGHTGLACLFLKRGAD-LGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRD 346 (368)
T ss_dssp HHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC---------------------
T ss_pred HHHHcCcHHHHHHHHHCcCC-CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHH
Confidence 99999999999999999999 7999999999999999999999999999887432211 45567777765543
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.73 E-value=1.5e-17 Score=129.48 Aligned_cols=95 Identities=23% Similarity=0.272 Sum_probs=85.6
Q ss_pred ccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCc
Q 014730 63 QTLARQDNHGHTAVIFCAAKGNLKALKVLLKYNPDLTNIRDSDGYLPVHNAAYYGHKDTFQYLLEATNGVDIYRGNDGAM 142 (419)
Q Consensus 63 ~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~g~~~~~~~~~~g~t 142 (419)
......|..|.||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|+++|++++. .+..|.|
T Consensus 15 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~-~d~~g~t 92 (110)
T 2zgd_A 15 PRGSHMGSDLGKKLLEAARAGQDDEVRILMANGAD-VAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXA-QDKFGKT 92 (110)
T ss_dssp -------CCHHHHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-CCTTSCC
T ss_pred CcccccCCccchHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc-cccCCCc
Confidence 34556788999999999999999999999999998 799999999999999999999999999999999999 9999999
Q ss_pred HHHHHHHcCcHHHHHHH
Q 014730 143 VLLFLIAANLYDVALDL 159 (419)
Q Consensus 143 ~l~~a~~~~~~~~~~~L 159 (419)
|||+|+..|+.+++++|
T Consensus 93 pl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 93 AFDISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHh
Confidence 99999999999999987
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.72 E-value=1.6e-17 Score=129.33 Aligned_cols=89 Identities=20% Similarity=0.199 Sum_probs=85.5
Q ss_pred CCCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHHHcCCHHHHHHHHhcCCCCCccCCCC
Q 014730 26 VEPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCAAKGNLKALKVLLKYNPDLTNIRDSD 105 (419)
Q Consensus 26 ~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~~~~ 105 (419)
+.+| .||||+|+ . .|+.+++++|++.| .+++.+|..|.||||+|+..|+.+++++|+++|++ ++.++..
T Consensus 21 ~~~g-~t~L~~A~-~------~g~~~~v~~Ll~~g--~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~-~~~~d~~ 89 (110)
T 2zgd_A 21 GSDL-GKKLLEAA-R------AGQDDEVRILMANG--ADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGAD-VXAQDKF 89 (110)
T ss_dssp -CCH-HHHHHHHH-H------HTCHHHHHHHHHTT--CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTT
T ss_pred CCcc-chHHHHHH-H------cCCHHHHHHHHHcC--CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccccC
Confidence 8889 99999999 9 99999999999999 99999999999999999999999999999999999 7999999
Q ss_pred CchHHHHHHHcCCHHHHHHH
Q 014730 106 GYLPVHNAAYYGHKDTFQYL 125 (419)
Q Consensus 106 g~t~L~~A~~~g~~~~~~~L 125 (419)
|.||||+|+..|+.+++++|
T Consensus 90 g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 90 GKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp SCCHHHHHHHHTCHHHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHh
Confidence 99999999999999999987
No 115
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=42.11 E-value=40 Score=31.16 Aligned_cols=49 Identities=12% Similarity=0.202 Sum_probs=38.6
Q ss_pred HHHhChHHHHHHHHHhcCCcc------------cccc--CCCCchHHHHHhhchHHHHHHHhhc
Q 014730 324 AAILGIPEVVNEFIMAYDSCS------------NWSN--QDGHTIFDHAVLHRREKVFNLIQGV 373 (419)
Q Consensus 324 A~~~g~~e~v~~Ll~~~~~d~------------~~~~--~~g~t~Lh~Av~~~~~~iv~~L~~~ 373 (419)
.+..|+...|+.-+.. |.|+ |..+ .-|.|.+|+|++..+.+++..|+..
T Consensus 29 gv~e~~~~~ve~y~~~-gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~~ 91 (454)
T 3zrh_A 29 GVVEGDLAAIEAYKSS-GGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLTE 91 (454)
T ss_dssp HHHHTCHHHHHHHHTT-TCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHcCChhHHHHHHhc-CCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhhc
Confidence 3456888888888888 6664 2222 6799999999999999999999875
No 116
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=31.72 E-value=31 Score=19.86 Aligned_cols=22 Identities=23% Similarity=0.072 Sum_probs=17.9
Q ss_pred hHHHHHHHHhChHHHHHHHHHh
Q 014730 318 SGAMLSAAILGIPEVVNEFIMA 339 (419)
Q Consensus 318 ~t~L~~A~~~g~~e~v~~Ll~~ 339 (419)
..-+.+||+.|+++.++.|=.+
T Consensus 14 EQqiyvA~seGd~etv~~Le~Q 35 (40)
T 1gp8_A 14 RKQMDAAASKGDVETYRKLKAK 35 (40)
T ss_dssp HHHHHHHHTTSCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHH
Confidence 4567889999999999988554
No 117
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=30.10 E-value=2e+02 Score=23.13 Aligned_cols=125 Identities=10% Similarity=0.045 Sum_probs=72.6
Q ss_pred CccCCChHHHHHHHHhCCcccccccCCCCCccHHHHHHHhhcccCCCchHHHHHHHHhhCCCccccccCCCCChHHHHHH
Q 014730 1 MIEKNDWPGVEDFVTNHPDALTAKIVEPGSKTIFHTIAELLVDDDSDEATCLLDKLATKVDPQTLARQDNHGHTAVIFCA 80 (419)
Q Consensus 1 A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~~t~L~~A~~~~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~g~t~L~~A~ 80 (419)
|++.|+++....+.+. ..+ ...- ++.=..|. . .|++++++....+- .++. ..+....
T Consensus 15 AL~lg~l~~A~e~a~~-l~~-----~~~W-k~Lg~~AL-~------~gn~~lAe~cy~~~--~D~~-------~L~~Ly~ 71 (177)
T 3mkq_B 15 ALEYGNLDAALDEAKK-LND-----SITW-ERLIQEAL-A------QGNASLAEMIYQTQ--HSFD-------KLSFLYL 71 (177)
T ss_dssp HHHTTCHHHHHHHHHH-HCC-----HHHH-HHHHHHHH-H------TTCHHHHHHHHHHT--TCHH-------HHHHHHH
T ss_pred HHhcCCHHHHHHHHHH-hCC-----HHHH-HHHHHHHH-H------cCChHHHHHHHHHh--CCHH-------HHHHHHH
Confidence 4556777776666554 110 0112 33445555 7 78888888777766 3332 2344444
Q ss_pred HcCCHHHHHHHHhcCCCCCccCCCCCchHHHHHHHcCCH-HHHHHHHhcCCCCccccCCCCCcHHHHHHHcCcHHHHHHH
Q 014730 81 AKGNLKALKVLLKYNPDLTNIRDSDGYLPVHNAAYYGHK-DTFQYLLEATNGVDIYRGNDGAMVLLFLIAANLYDVALDL 159 (419)
Q Consensus 81 ~~g~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~-~~~~~Ll~~g~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L 159 (419)
..|+.+-++.+.+.- ....+-..+++.+...|+. ++++.|.+.|--+ -+...|..+|..++.+-+
T Consensus 72 ~tg~~e~L~kla~iA-----~~~g~~n~af~~~l~lGdv~~~i~lL~~~~r~~---------eA~~~A~t~g~~~~a~~~ 137 (177)
T 3mkq_B 72 VTGDVNKLSKMQNIA-----QTREDFGSMLLNTFYNNSTKERSSIFAEGGSLP---------LAYAVAKANGDEAAASAF 137 (177)
T ss_dssp HHTCHHHHHHHHHHH-----HHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHH---------HHHHHHHHTTCHHHHHHH
T ss_pred HhCCHHHHHHHHHHH-----HHCccHHHHHHHHHHcCCHHHHHHHHHHCCChH---------HHHHHHHHcCcHHHHHHH
Confidence 456666655554431 1112234567777777775 4788887776322 235667778888988888
Q ss_pred Hhh
Q 014730 160 LKL 162 (419)
Q Consensus 160 l~~ 162 (419)
++.
T Consensus 138 ~~~ 140 (177)
T 3mkq_B 138 LEQ 140 (177)
T ss_dssp HHH
T ss_pred HHH
Confidence 875
Done!