Your job contains 1 sequence.
>014732
MLSQEESGRVFEMLKSQEKPVEEIVSDLISTFPRHRHFVLCTTLSLLLQDKKALNSTERL
VAFAILHHSYCSQKPSANPFISLIINSACDDEVEKFERAFLLQLLSSSSSNSNKEFLKQS
AADYIKAFDPSSHAFPQREQLQQQYCDKVHPEPFNSAYINASTKNAFPDPDLPHGCDPNS
PEFDFQPGAKTKLGAGSKDETVTGLLTHLSLKGLDPRWIRPLPPRFPVLDRELEWLIPDN
NHELLWDHGMCADTSRGAAVRDLIAKALKGPLLPAQYEQVVVELANDPKLVYHCGLTPRK
LPELVENNPLIAVDVLTKLINSPEISEYYTVLVNMDMSLHSMEVVNRLTTAVELPKEFVR
MYITNCISSCQNIKVFLFSMLFCCSNGIIYKALCNIKVFLFSMLFCCLNGIIYKALCNN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 014732
(419 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2146208 - symbol:AT5G18420 "AT5G18420" species... 1142 7.1e-116 1
MGI|MGI:106580 - symbol:Cnot11 "CCR4-NOT transcription co... 495 6.9e-53 2
UNIPROTKB|Q9UKZ1 - symbol:CNOT11 "CCR4-NOT transcription ... 494 8.7e-53 2
RGD|1560909 - symbol:Cnot11 "CCR4-NOT transcription compl... 494 8.7e-53 2
DICTYBASE|DDB_G0279005 - symbol:DDB_G0279005 "unknown" sp... 330 2.5e-39 3
>TAIR|locus:2146208 [details] [associations]
symbol:AT5G18420 "AT5G18420" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0009644 "response to high light intensity" evidence=RCA]
[GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0042542
"response to hydrogen peroxide" evidence=RCA] EMBL:CP002688
GenomeReviews:BA000015_GR InterPro:IPR019312 PANTHER:PTHR15975
Pfam:PF10155 EMBL:BT033121 IPI:IPI00535931 RefSeq:NP_850845.1
UniGene:At.31427 PRIDE:B4F7N8 EnsemblPlants:AT5G18420.2
GeneID:831960 KEGG:ath:AT5G18420 TAIR:At5g18420 OMA:LNPDNNH
PhylomeDB:B4F7N8 Genevestigator:Q3E9F1 Uniprot:B4F7N8
Length = 442
Score = 1142 (407.1 bits), Expect = 7.1e-116, P = 7.1e-116
Identities = 217/410 (52%), Positives = 289/410 (70%)
Query: 5 EESGRVFEMLKSQEKPVEEIVSDLISTFPRHRHFVLCTTLSLLLQDKKALNSTERLVAFA 64
EES V +LKS +P+E+++S+ S F R+ +C +LS++LQD++ +TERL+AF
Sbjct: 12 EESAIVLSLLKSDLRPMEDVLSEFDSKFESARYLSVCNSLSMMLQDQQMFKNTERLIAFG 71
Query: 65 ILHHSYCSQKPSANPFISLIINSACDDEVEKFERAFXXXXXXXXXXXXXKEFLKQSAADY 124
I++ Y SQKPS NPF+S +I++AC++++EK ERAF KE LK SA DY
Sbjct: 72 IIYQCYSSQKPSFNPFLSEMISAACNEQLEKSERAFLLHLLQWNSYNNVKEILKLSAVDY 131
Query: 125 IKAFDPSSHAFPQREQLQQQYCDKVHPEPFNSAYINASTKNAFPDPDLPHGCDPNSPEFD 184
I++FDPS+H FP+ +LQ++Y DK P P + + + S K DPD+P GCDPNSPEFD
Sbjct: 132 IRSFDPSTHDFPELGELQREYGDKADPGPSSHIFADYSLKKLLHDPDVPRGCDPNSPEFD 191
Query: 185 FQPGAKTKLGAGSKDETVTGLLTHLSLKGLDPRWIRPLPPRFPVLDRELEWLIPDNNHEL 244
Q G ++G+G +DE ++G L +L++ GL PRWIRP PPR+PV EL W+ PDN HEL
Sbjct: 192 VQAGVNPRIGSGDRDEALSGFLGNLTMGGLGPRWIRPCPPRYPVHQSELLWIDPDNKHEL 251
Query: 245 LWDHGMCADTSRGAAVRDLIAKALKGPLLPAQYEQVVVELANDPKLVYHCGLTPRKLPEL 304
+WD MCADTS GA VRDL+ K LK L P + E ++ ELANDPKLV+HCG+TPRKLP+L
Sbjct: 252 VWDDKMCADTSSGATVRDLLVKGLKVTLSPTEQEDIITELANDPKLVFHCGITPRKLPQL 311
Query: 305 VENNPLIAVDVLTKLINSPEISEYYTVLVNMDMSLHSMEVVNRLTTAVELPKEFVRMYIT 364
VE+NP IAV++LTKL NS EI++YY L NMDMSLHSMEVVNRLTTAVELPK+F+RMYIT
Sbjct: 312 VEHNPQIAVEILTKLNNSTEINDYYEALGNMDMSLHSMEVVNRLTTAVELPKDFIRMYIT 371
Query: 365 NCISSCQNIKV---FLFSML--FCCS--NGIIYKALCNIK-VFLFSMLFC 406
NCISSC+N K ++ + L C +I + N+K +F+ FC
Sbjct: 372 NCISSCENAKQQDKYMQNRLVRLVCVFLQSLIRNKIINVKDLFIEVQAFC 421
>MGI|MGI:106580 [details] [associations]
symbol:Cnot11 "CCR4-NOT transcription complex, subunit 11"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0030014 "CCR4-NOT complex" evidence=ISO] MGI:MGI:106580
eggNOG:NOG237228 InterPro:IPR019312 PANTHER:PTHR15975 Pfam:PF10155
HOGENOM:HOG000264251 HOVERGEN:HBG080995 OMA:QWDRSMC
OrthoDB:EOG4PK27X EMBL:AK010503 EMBL:AK144692 EMBL:AK167440
EMBL:BC049091 EMBL:BC050812 IPI:IPI00109313 RefSeq:NP_082319.1
UniGene:Mm.259421 UniGene:Mm.490693 PhosphoSite:Q9CWN7 PaxDb:Q9CWN7
PRIDE:Q9CWN7 Ensembl:ENSMUST00000003219 Ensembl:ENSMUST00000161515
GeneID:52846 KEGG:mmu:52846 UCSC:uc007ati.1 CTD:52846
GeneTree:ENSGT00390000006356 InParanoid:Q9CWN7 NextBio:309623
Bgee:Q9CWN7 Genevestigator:Q9CWN7 GermOnline:ENSMUSG00000003135
Uniprot:Q9CWN7
Length = 505
Score = 495 (179.3 bits), Expect = 6.9e-53, Sum P(2) = 6.9e-53
Identities = 106/244 (43%), Positives = 150/244 (61%)
Query: 170 PDLPHGCDPNSPEFDFQPGAKTKLGAGSKDETVTGLLTHLSLKGLDPRWIRPLPPRFPVL 229
P + DP+S F +++ + V+G + P +IRP PP +
Sbjct: 236 PSILSDPDPDSSNSGFDSSVASRI----TESLVSGPKPPIE-SHFRPEFIRP-PPPLHIC 289
Query: 230 DRELEWLIP-DNNHELLWDHGMCADTSRGAAVRDLIAKALKGPLLPAQYEQVVVELANDP 288
+ EL WL P + H + WD MC S G ++ ++AKA K PL Q Q++ EL DP
Sbjct: 290 EDELAWLNPTEPEHAIQWDRSMCVKNSTGVEIKRIMAKAFKSPLSSPQQTQLLGELEKDP 349
Query: 289 KLVYHCGLTPRKLPELVENNPLIAVDVLTKLINSPEISEYYTVLVNMDMSLHSMEVVNRL 348
KLVYH GLTP KLP+LVENNPL+A+++L KL+ S +I+EY++VLVNMDMSLHSMEVVNRL
Sbjct: 350 KLVYHIGLTPAKLPDLVENNPLVAIEMLLKLMQSSQITEYFSVLVNMDMSLHSMEVVNRL 409
Query: 349 TTAVELPKEFVRMYITNCISSCQNIK-VFLFSML--FCCS--NGIIYKALCNIK-VFLFS 402
TTAV+LP EF+ +YI+NCIS+C+ IK ++ + L C +I + N++ +F+
Sbjct: 410 TTAVDLPPEFIHLYISNCISTCEQIKDKYMQNRLVRLVCVFLQSLIRNKIINVQDLFIEV 469
Query: 403 MLFC 406
FC
Sbjct: 470 QAFC 473
Score = 70 (29.7 bits), Expect = 6.9e-53, Sum P(2) = 6.9e-53
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 32 FPRHRHFVLCTTLSLLLQDKKALNST-ERLVAFAILHHSYCSQKPSANPF 80
F + HF L + L +LLQ L S +RL A +L Y ++ +ANPF
Sbjct: 91 FSKADHFRLGSVLVMLLQQPDLLPSAAQRLTALYLLWEMYRTEPLAANPF 140
>UNIPROTKB|Q9UKZ1 [details] [associations]
symbol:CNOT11 "CCR4-NOT transcription complex subunit 11"
species:9606 "Homo sapiens" [GO:0008283 "cell proliferation"
evidence=NAS] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0030014 "CCR4-NOT
complex" evidence=IDA] [GO:0000288 "nuclear-transcribed mRNA
catabolic process, deadenylation-dependent decay" evidence=TAS]
[GO:0000289 "nuclear-transcribed mRNA poly(A) tail shortening"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] Reactome:REACT_71
Reactome:REACT_21257 GO:GO:0005829 GO:GO:0008283 GO:GO:0000289
eggNOG:NOG237228 InterPro:IPR019312 PANTHER:PTHR15975 Pfam:PF10155
EMBL:AF103798 EMBL:AC013722 EMBL:BC018664 EMBL:BC064421
IPI:IPI00014194 RefSeq:NP_060016.3 UniGene:Hs.593973
ProteinModelPortal:Q9UKZ1 IntAct:Q9UKZ1 STRING:Q9UKZ1
PhosphoSite:Q9UKZ1 DMDM:71152358 PaxDb:Q9UKZ1 PeptideAtlas:Q9UKZ1
PRIDE:Q9UKZ1 Ensembl:ENST00000289382 GeneID:55571 KEGG:hsa:55571
UCSC:uc002taw.4 CTD:55571 GeneCards:GC02P101869 H-InvDB:HIX0002326
HGNC:HGNC:25217 neXtProt:NX_Q9UKZ1 PharmGKB:PA134899354
HOGENOM:HOG000264251 HOVERGEN:HBG080995 InParanoid:Q9UKZ1
OMA:QWDRSMC OrthoDB:EOG4PK27X PhylomeDB:Q9UKZ1 ChiTaRS:C2orf29
GenomeRNAi:55571 NextBio:60062 ArrayExpress:Q9UKZ1 Bgee:Q9UKZ1
CleanEx:HS_C2orf29 Genevestigator:Q9UKZ1 GermOnline:ENSG00000158435
Uniprot:Q9UKZ1
Length = 510
Score = 494 (179.0 bits), Expect = 8.7e-53, Sum P(2) = 8.7e-53
Identities = 99/198 (50%), Positives = 136/198 (68%)
Query: 216 PRWIRPLPPRFPVLDRELEWLIP-DNNHELLWDHGMCADTSRGAAVRDLIAKALKGPLLP 274
P +IRP PP + + EL WL P + +H + WD MC S G ++ ++AKA K PL
Sbjct: 282 PEFIRP-PPPLHICEDELAWLNPTEPDHAIQWDKSMCVKNSTGVEIKRIMAKAFKSPLSS 340
Query: 275 AQYEQVVVELANDPKLVYHCGLTPRKLPELVENNPLIAVDVLTKLINSPEISEYYTVLVN 334
Q Q++ EL DPKLVYH GLTP KLP+LVENNPL+A+++L KL+ S +I+EY++VLVN
Sbjct: 341 PQQTQLLGELEKDPKLVYHIGLTPAKLPDLVENNPLVAIEMLLKLMQSSQITEYFSVLVN 400
Query: 335 MDMSLHSMEVVNRLTTAVELPKEFVRMYITNCISSCQNIK-VFLFSML--FCCS--NGII 389
MDMSLHSMEVVNRLTTAV+LP EF+ +YI+NCIS+C+ IK ++ + L C +I
Sbjct: 401 MDMSLHSMEVVNRLTTAVDLPPEFIHLYISNCISTCEQIKDKYMQNRLVRLVCVFLQSLI 460
Query: 390 YKALCNIK-VFLFSMLFC 406
+ N++ +F+ FC
Sbjct: 461 RNKIINVQDLFIEVQAFC 478
Score = 70 (29.7 bits), Expect = 8.7e-53, Sum P(2) = 8.7e-53
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 32 FPRHRHFVLCTTLSLLLQDKKALNST-ERLVAFAILHHSYCSQKPSANPF 80
F + HF L + L +LLQ L S +RL A +L Y ++ +ANPF
Sbjct: 96 FSKADHFRLGSVLVMLLQQPDLLPSAAQRLTALYLLWEMYRTEPLAANPF 145
>RGD|1560909 [details] [associations]
symbol:Cnot11 "CCR4-NOT transcription complex, subunit 11"
species:10116 "Rattus norvegicus" [GO:0030014 "CCR4-NOT complex"
evidence=ISO] RGD:1560909 eggNOG:NOG237228 InterPro:IPR019312
PANTHER:PTHR15975 Pfam:PF10155 HOGENOM:HOG000264251
HOVERGEN:HBG080995 OMA:QWDRSMC OrthoDB:EOG4PK27X
GeneTree:ENSGT00390000006356 EMBL:CH473965 EMBL:BC158750
IPI:IPI00366941 RefSeq:NP_001102264.1 UniGene:Rn.22860
STRING:B0BNA9 PRIDE:B0BNA9 Ensembl:ENSRNOT00000031352 GeneID:363221
KEGG:rno:363221 UCSC:RGD:1560909 CTD:363221 NextBio:682882
Genevestigator:B0BNA9 Uniprot:B0BNA9
Length = 504
Score = 494 (179.0 bits), Expect = 8.7e-53, Sum P(2) = 8.7e-53
Identities = 99/198 (50%), Positives = 135/198 (68%)
Query: 216 PRWIRPLPPRFPVLDRELEWLIP-DNNHELLWDHGMCADTSRGAAVRDLIAKALKGPLLP 274
P +IRP PP + + EL WL P + H + WD MC S G ++ ++AKA K PL
Sbjct: 276 PEFIRP-PPPLHICEDELAWLNPTEPEHAIQWDRSMCVKNSTGVEIKRIMAKAFKSPLSS 334
Query: 275 AQYEQVVVELANDPKLVYHCGLTPRKLPELVENNPLIAVDVLTKLINSPEISEYYTVLVN 334
Q Q++ EL DPKLVYH GLTP KLP+LVENNPL+A+++L KL+ S +I+EY++VLVN
Sbjct: 335 PQQTQLLGELEKDPKLVYHIGLTPAKLPDLVENNPLVAIEMLLKLMQSSQITEYFSVLVN 394
Query: 335 MDMSLHSMEVVNRLTTAVELPKEFVRMYITNCISSCQNIK-VFLFSML--FCCS--NGII 389
MDMSLHSMEVVNRLTTAV+LP EF+ +YI+NCIS+C+ IK ++ + L C +I
Sbjct: 395 MDMSLHSMEVVNRLTTAVDLPPEFIHLYISNCISTCEQIKDKYMQNRLVRLVCVFLQSLI 454
Query: 390 YKALCNIK-VFLFSMLFC 406
+ N++ +F+ FC
Sbjct: 455 RNKIINVQDLFIEVQAFC 472
Score = 70 (29.7 bits), Expect = 8.7e-53, Sum P(2) = 8.7e-53
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 32 FPRHRHFVLCTTLSLLLQDKKALNST-ERLVAFAILHHSYCSQKPSANPF 80
F + HF L + L +LLQ L S +RL A +L Y ++ +ANPF
Sbjct: 90 FSKADHFRLGSVLVMLLQQPDLLPSAAQRLTALYLLWEMYRTEPLAANPF 139
>DICTYBASE|DDB_G0279005 [details] [associations]
symbol:DDB_G0279005 "unknown" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND]
dictyBase:DDB_G0279005 EMBL:AAFI02000026 RefSeq:XP_001134571.1
EnsemblProtists:DDB0232148 GeneID:8621826 KEGG:ddi:DDB_G0279005
eggNOG:NOG237228 InParanoid:Q1ZXI2 OMA:KNFYLER InterPro:IPR019312
PANTHER:PTHR15975 Pfam:PF10155 Uniprot:Q1ZXI2
Length = 642
Score = 330 (121.2 bits), Expect = 2.5e-39, Sum P(3) = 2.5e-39
Identities = 73/153 (47%), Positives = 95/153 (62%)
Query: 260 VRDLIAKALKGPLLPAQYEQVVVELANDPKLVYHCGLTPRKLPELVENNPLIAVDVLTKL 319
VRDL+ KA+KG L +Q Q+ E+ DPKL Y+ GLTP+ LP LVENN +A+D L KL
Sbjct: 419 VRDLMTKAIKGRLKKSQILQIKNEMDIDPKLAYYSGLTPKNLPFLVENNTQVAIDTLLKL 478
Query: 320 INSPEISEYYTVLVNMDMSLHSMEVVNRLTTAVELPKEFVRMYITNCISSCQNIKVFLFS 379
INSP+ +++ L++M+M+ SMEVVN L T V+LP F+ MYITNCI SC NIK
Sbjct: 479 INSPDFKDHFQTLISMEMNFRSMEVVNALAT-VDLPPHFIPMYITNCIDSCNNIKDKAMQ 537
Query: 380 M----LFCCS-NGIIYKALCNIK-VFLFSMLFC 406
L C +I + NIK +F FC
Sbjct: 538 QRSVRLVCVFIQSLIRNNIINIKNLFCEVQTFC 570
Score = 83 (34.3 bits), Expect = 2.5e-39, Sum P(3) = 2.5e-39
Identities = 21/88 (23%), Positives = 43/88 (48%)
Query: 1 MLSQEESGRVFEMLKSQEKPVEEIVSDLISTFPRHRHFVLCTTLSLLLQDKKALNSTERL 60
M+ ++ + +L +KP E I + TF ++ HF + + +++D ++RL
Sbjct: 1 MIDSKDLATLLSLLDESDKPFETIATTFYRTFSKNDHFKVGCAIYTIIKDGFIRIPSQRL 60
Query: 61 VAFAILHHSYCSQKPSANPFISLIINSA 88
+ F IL Y KP ++ S ++S+
Sbjct: 61 IGFYILFSLY---KPDSSILSSNSLSSS 85
Score = 55 (24.4 bits), Expect = 2.5e-39, Sum P(3) = 2.5e-39
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 209 LSLKGLDPRWIRPLPPRFPVLDRELEWLIPDNNHELLWDHGM 250
LS +PR+ R PP F W+ P NH LL + M
Sbjct: 346 LSFFSFEPRFKRAEPPSF----NPTTWINPSINHGLLLSNPM 383
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.137 0.418 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 419 406 0.00078 118 3 11 22 0.37 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 5
No. of states in DFA: 617 (66 KB)
Total size of DFA: 271 KB (2142 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 33.51u 0.12s 33.63t Elapsed: 00:00:02
Total cpu time: 33.51u 0.12s 33.63t Elapsed: 00:00:02
Start: Sat May 11 15:10:43 2013 End: Sat May 11 15:10:45 2013