BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014732
(419 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A4QP78|CB029_DANRE UPF0760 protein C2orf29 homolog OS=Danio rerio GN=zgc:163002 PE=2
SV=1
Length = 445
Score = 204 bits (519), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 143/373 (38%), Positives = 201/373 (53%), Gaps = 42/373 (11%)
Query: 22 EEIVSDLISTFPRHRHFVLCTTLSLLLQDKKALNST-ERLVAFAILHHSYCSQKPSANPF 80
E++ S F + HF + + L +LLQ L S +RL A +L Y ++ +ANPF
Sbjct: 25 EQLSSAFHHCFGKAEHFGVGSVLVMLLQQPDLLPSAPQRLTALYLLWEMYRTEPLAANPF 84
Query: 81 ISLIIN----SACDDEVEKF-----------ERAFLLQLLSSSSSNSNKEFLKQSAADYI 125
++ + S+ +E EK E+ FL QL+ + +E K++ +
Sbjct: 85 AAVFAHLLNPSSAAEEQEKTLSGFLPPITLPEKFFLSQLMLAPP----RELFKKTPRQ-V 139
Query: 126 KAFDPSSHAFPQR---EQLQQQYCDKVHPEPFNSAYINASTKNAFPDPDLPHGCDPNSPE 182
D +S PQ LQ ++ P S AS + DPD P+S
Sbjct: 140 SCMDITST--PQTIDISGLQLALAERQSELPTQS---KASFPSLLSDPD------PDSSN 188
Query: 183 FDFQPGAKTKLGAGSKDETVTGLLTHLSLKGLDPRWIRPLPPRFPVLDRELEWLIP-DNN 241
F ++ + VTG L P +IRP PP V + EL WL P +
Sbjct: 189 SGFDSSVANQI----TESLVTGPRPPLE-SHFRPEFIRPTPPLL-VCEDELCWLNPCEPE 242
Query: 242 HELLWDHGMCADTSRGAAVRDLIAKALKGPLLPAQYEQVVVELANDPKLVYHCGLTPRKL 301
H + WD MC G ++ ++AKA K PL AQ Q++ EL D KLVYH GLTP KL
Sbjct: 243 HRVQWDRSMCVRNGTGVEIKRIMAKAFKSPLSAAQQTQLLGELEKDLKLVYHIGLTPAKL 302
Query: 302 PELVENNPLIAVDVLTKLINSPEISEYYTVLVNMDMSLHSMEVVNRLTTAVELPKEFVRM 361
P+LVENNPL+A+++L KL++S +I+EY++VLVNMDMSLHSMEVVNRLTTAV+LP EF+ +
Sbjct: 303 PDLVENNPLVAIEMLLKLMSSSQITEYFSVLVNMDMSLHSMEVVNRLTTAVDLPPEFIHL 362
Query: 362 YITNCISSCQNIK 374
YI+NCIS+C+ IK
Sbjct: 363 YISNCISTCEQIK 375
>sp|Q9UKZ1|CB029_HUMAN UPF0760 protein C2orf29 OS=Homo sapiens GN=C2orf29 PE=1 SV=1
Length = 510
Score = 200 bits (508), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 135/368 (36%), Positives = 194/368 (52%), Gaps = 48/368 (13%)
Query: 32 FPRHRHFVLCTTLSLLLQDKKAL-NSTERLVAFAILHHSYCSQKPSANPF---ISLIINS 87
F + HF L + L +LLQ L ++ +RL A +L Y ++ +ANPF + ++N
Sbjct: 96 FSKADHFRLGSVLVMLLQQPDLLPSAAQRLTALYLLWEMYRTEPLAANPFAASFAHLLNP 155
Query: 88 ACDDE----------------VEKFERAFLLQLLSSSSSNSNKEFLKQSA----ADYIKA 127
A + E+ FL QL+ + K+ +Q A + ++
Sbjct: 156 APPARGGQEPDRPPLSGFLPPITPPEKFFLSQLMLAPPRELFKKTPRQIALMDVGNMGQS 215
Query: 128 FDPSSHAFPQREQLQQQYCDKVHPEPFNSAYINASTKNAFPDPDLPHGCDPNSPEFDFQP 187
D S LQ ++ P S AS + DPD P+S F
Sbjct: 216 VDISG--------LQLALAERQSELPTQS---KASFPSILSDPD------PDSSNSGFDS 258
Query: 188 GAKTKLGAGSKDETVTGLLTHLSLKGLDPRWIRPLPPRFPVLDRELEWLIP-DNNHELLW 246
+++ + +H P +IRP PP + + EL WL P + +H + W
Sbjct: 259 SVASQITEALVSGPKPPIESHFR-----PEFIRP-PPPLHICEDELAWLNPTEPDHAIQW 312
Query: 247 DHGMCADTSRGAAVRDLIAKALKGPLLPAQYEQVVVELANDPKLVYHCGLTPRKLPELVE 306
D MC S G ++ ++AKA K PL Q Q++ EL DPKLVYH GLTP KLP+LVE
Sbjct: 313 DKSMCVKNSTGVEIKRIMAKAFKSPLSSPQQTQLLGELEKDPKLVYHIGLTPAKLPDLVE 372
Query: 307 NNPLIAVDVLTKLINSPEISEYYTVLVNMDMSLHSMEVVNRLTTAVELPKEFVRMYITNC 366
NNPL+A+++L KL+ S +I+EY++VLVNMDMSLHSMEVVNRLTTAV+LP EF+ +YI+NC
Sbjct: 373 NNPLVAIEMLLKLMQSSQITEYFSVLVNMDMSLHSMEVVNRLTTAVDLPPEFIHLYISNC 432
Query: 367 ISSCQNIK 374
IS+C+ IK
Sbjct: 433 ISTCEQIK 440
>sp|Q9CWN7|CB029_MOUSE UPF0760 protein C2orf29 homolog OS=Mus musculus GN=D1Bwg0212e PE=2
SV=1
Length = 505
Score = 200 bits (508), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 135/368 (36%), Positives = 193/368 (52%), Gaps = 48/368 (13%)
Query: 32 FPRHRHFVLCTTLSLLLQDKKAL-NSTERLVAFAILHHSYCSQKPSANPF---ISLIINS 87
F + HF L + L +LLQ L ++ +RL A +L Y ++ +ANPF + ++N
Sbjct: 91 FSKADHFRLGSVLVMLLQQPDLLPSAAQRLTALYLLWEMYRTEPLAANPFAASFAHLLNP 150
Query: 88 ACDDE----------------VEKFERAFLLQLLSSSSSNSNKEFLKQSA----ADYIKA 127
A + E+ FL QL+ + K+ +Q A + ++
Sbjct: 151 APPARGGQEPDRPPLSGFLPPITPPEKFFLSQLMLAPPRELFKKTPRQIALMDVGNMGQS 210
Query: 128 FDPSSHAFPQREQLQQQYCDKVHPEPFNSAYINASTKNAFPDPDLPHGCDPNSPEFDFQP 187
D S LQ ++ P S AS + DPD P+S F
Sbjct: 211 VDISG--------LQLALAERQSELPTQS---KASFPSILSDPD------PDSSNSGFDS 253
Query: 188 GAKTKLGAGSKDETVTGLLTHLSLKGLDPRWIRPLPPRFPVLDRELEWLIP-DNNHELLW 246
+++ + +H P +IRP PP + + EL WL P + H + W
Sbjct: 254 SVASRITESLVSGPKPPIESHFR-----PEFIRP-PPPLHICEDELAWLNPTEPEHAIQW 307
Query: 247 DHGMCADTSRGAAVRDLIAKALKGPLLPAQYEQVVVELANDPKLVYHCGLTPRKLPELVE 306
D MC S G ++ ++AKA K PL Q Q++ EL DPKLVYH GLTP KLP+LVE
Sbjct: 308 DRSMCVKNSTGVEIKRIMAKAFKSPLSSPQQTQLLGELEKDPKLVYHIGLTPAKLPDLVE 367
Query: 307 NNPLIAVDVLTKLINSPEISEYYTVLVNMDMSLHSMEVVNRLTTAVELPKEFVRMYITNC 366
NNPL+A+++L KL+ S +I+EY++VLVNMDMSLHSMEVVNRLTTAV+LP EF+ +YI+NC
Sbjct: 368 NNPLVAIEMLLKLMQSSQITEYFSVLVNMDMSLHSMEVVNRLTTAVDLPPEFIHLYISNC 427
Query: 367 ISSCQNIK 374
IS+C+ IK
Sbjct: 428 ISTCEQIK 435
>sp|B0BNA9|CB029_RAT UPF0760 protein C2orf29 homolog OS=Rattus norvegicus PE=2 SV=1
Length = 504
Score = 199 bits (506), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 135/368 (36%), Positives = 193/368 (52%), Gaps = 48/368 (13%)
Query: 32 FPRHRHFVLCTTLSLLLQDKKAL-NSTERLVAFAILHHSYCSQKPSANPF---ISLIINS 87
F + HF L + L +LLQ L ++ +RL A +L Y ++ +ANPF + ++N
Sbjct: 90 FSKADHFRLGSVLVMLLQQPDLLPSAAQRLTALYLLWEMYRTEPLAANPFAASFAHLLNP 149
Query: 88 ACDDE----------------VEKFERAFLLQLLSSSSSNSNKEFLKQSA----ADYIKA 127
A + E+ FL QL+ + K+ +Q A + ++
Sbjct: 150 APPARGGQEPDRPPLSGFLPPITPPEKFFLSQLMLAPPRELFKKTPRQIALMDVGNMGQS 209
Query: 128 FDPSSHAFPQREQLQQQYCDKVHPEPFNSAYINASTKNAFPDPDLPHGCDPNSPEFDFQP 187
D S LQ ++ P S AS + DPD P+S F
Sbjct: 210 VDISG--------LQLALAERQSELPTQS---KASFPSILSDPD------PDSSNSAFDS 252
Query: 188 GAKTKLGAGSKDETVTGLLTHLSLKGLDPRWIRPLPPRFPVLDRELEWLIP-DNNHELLW 246
+++ + +H P +IRP PP + + EL WL P + H + W
Sbjct: 253 SVASRITESLVSGPKPPIESHFR-----PEFIRP-PPPLHICEDELAWLNPTEPEHAIQW 306
Query: 247 DHGMCADTSRGAAVRDLIAKALKGPLLPAQYEQVVVELANDPKLVYHCGLTPRKLPELVE 306
D MC S G ++ ++AKA K PL Q Q++ EL DPKLVYH GLTP KLP+LVE
Sbjct: 307 DRSMCVKNSTGVEIKRIMAKAFKSPLSSPQQTQLLGELEKDPKLVYHIGLTPAKLPDLVE 366
Query: 307 NNPLIAVDVLTKLINSPEISEYYTVLVNMDMSLHSMEVVNRLTTAVELPKEFVRMYITNC 366
NNPL+A+++L KL+ S +I+EY++VLVNMDMSLHSMEVVNRLTTAV+LP EF+ +YI+NC
Sbjct: 367 NNPLVAIEMLLKLMQSSQITEYFSVLVNMDMSLHSMEVVNRLTTAVDLPPEFIHLYISNC 426
Query: 367 ISSCQNIK 374
IS+C+ IK
Sbjct: 427 ISTCEQIK 434
>sp|Q1ZXI2|CB029_DICDI UPF0760 protein DDB_G0279005 OS=Dictyostelium discoideum
GN=DDB_G0279005 PE=3 SV=1
Length = 642
Score = 137 bits (345), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 106/193 (54%), Gaps = 31/193 (16%)
Query: 208 HLSLKGLDPRWIRPLPPRFPVLDRELEWLIPDNNHELLWDHGMCA--------------- 252
LS +PR+ R PP F W+ P NH LL + M +
Sbjct: 345 ELSFFSFEPRFKRAEPPSF----NPTTWINPSINHGLLLSNPMSSTVAATIAATATSAPT 400
Query: 253 ---------DTSRGAA--VRDLIAKALKGPLLPAQYEQVVVELANDPKLVYHCGLTPRKL 301
TS + VRDL+ KA+KG L +Q Q+ E+ DPKL Y+ GLTP+ L
Sbjct: 401 TILIPSPTTTTSYNSKKIVRDLMTKAIKGRLKKSQILQIKNEMDIDPKLAYYSGLTPKNL 460
Query: 302 PELVENNPLIAVDVLTKLINSPEISEYYTVLVNMDMSLHSMEVVNRLTTAVELPKEFVRM 361
P LVENN +A+D L KLINSP+ +++ L++M+M+ SMEVVN L T V+LP F+ M
Sbjct: 461 PFLVENNTQVAIDTLLKLINSPDFKDHFQTLISMEMNFRSMEVVNALAT-VDLPPHFIPM 519
Query: 362 YITNCISSCQNIK 374
YITNCI SC NIK
Sbjct: 520 YITNCIDSCNNIK 532
Score = 36.6 bits (83), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 34/70 (48%)
Query: 1 MLSQEESGRVFEMLKSQEKPVEEIVSDLISTFPRHRHFVLCTTLSLLLQDKKALNSTERL 60
M+ ++ + +L +KP E I + TF ++ HF + + +++D ++RL
Sbjct: 1 MIDSKDLATLLSLLDESDKPFETIATTFYRTFSKNDHFKVGCAIYTIIKDGFIRIPSQRL 60
Query: 61 VAFAILHHSY 70
+ F IL Y
Sbjct: 61 IGFYILFSLY 70
>sp|Q8U227|SYC_PYRFU Cysteine--tRNA ligase OS=Pyrococcus furiosus (strain ATCC 43587 /
DSM 3638 / JCM 8422 / Vc1) GN=cysS PE=3 SV=2
Length = 477
Score = 35.0 bits (79), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Query: 291 VYHCGLTPRKLPELVENNPLIAVDVLTKLINSPEISEYYTVLVNMDMSLHSMEVVNRLTT 350
+Y CG T P L IA DV+ + + YTVL+ M+ + +++ R
Sbjct: 25 MYVCGPTVYDYPHLGHARTYIAFDVIRRYLEHKG----YTVLMVMNFTDIDDKIIKRARE 80
Query: 351 AVELPKEFVRMYITNCISSCQNIKV 375
E PKE +I + + +KV
Sbjct: 81 TGEDPKELAERFIKIFLEDMEALKV 105
>sp|C5A739|SYC_THEGJ Cysteine--tRNA ligase OS=Thermococcus gammatolerans (strain DSM
15229 / JCM 11827 / EJ3) GN=cysS PE=3 SV=1
Length = 476
Score = 33.9 bits (76), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Query: 291 VYHCGLTPRKLPELVENNPLIAVDVLTKLINSPEISEYYTVLVNMDMSLHSMEVVNRLTT 350
+Y CG T P L IA DV+ + + YTVL+ M+ + +++ R
Sbjct: 26 MYVCGPTVYDYPHLGHARTYIAFDVIRRYLEHKG----YTVLMVMNFTDIDDKIIKRANE 81
Query: 351 AVELPKEFVRMYITNCISSCQNIKV 375
E PKE ++ + + +KV
Sbjct: 82 TGEDPKELAEKFLRIFLEDMKALKV 106
>sp|P04166|CYB5B_RAT Cytochrome b5 type B OS=Rattus norvegicus GN=Cyb5b PE=1 SV=2
Length = 146
Score = 33.5 bits (75), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 26/54 (48%)
Query: 98 RAFLLQLLSSSSSNSNKEFLKQSAADYIKAFDPSSHAFPQREQLQQQYCDKVHP 151
R + + S + L+Q+ AD ++F+ H+ RE L+Q Y VHP
Sbjct: 44 RVYDITRFLSEHPGGEEVLLEQAGADATESFEDVGHSPDAREMLKQYYIGDVHP 97
>sp|Q9CQX2|CYB5B_MOUSE Cytochrome b5 type B OS=Mus musculus GN=Cyb5b PE=1 SV=1
Length = 146
Score = 33.5 bits (75), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 26/54 (48%)
Query: 98 RAFLLQLLSSSSSNSNKEFLKQSAADYIKAFDPSSHAFPQREQLQQQYCDKVHP 151
R + + S + L+Q+ AD ++F+ H+ RE L+Q Y VHP
Sbjct: 44 RVYDITRFLSEHPGGEEVLLEQAGADATESFEDVGHSPDAREMLKQYYIGDVHP 97
>sp|C4K0H2|FOLD_RICPU Bifunctional protein FolD OS=Rickettsia peacockii (strain Rustic)
GN=folD PE=3 SV=1
Length = 288
Score = 33.1 bits (74), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 289 KLVYHCGLTPRKLPELVENNPLIAVDVLTKLINSPEISEYYTVLVNMDMSLHSMEVVNRL 348
+L H +P+ LV +NP + V K+ N+ +I YTVL+N+ ++H+ ++++++
Sbjct: 24 ELTSHTNASPKLAIVLVGDNPASIIYVRNKIKNAHKIG-IYTVLINLSATIHTNDLISKI 82
>sp|A5ISW6|EBH_STAA9 Extracellular matrix-binding protein ebh OS=Staphylococcus aureus
(strain JH9) GN=ebh PE=4 SV=1
Length = 10624
Score = 33.1 bits (74), Expect = 4.6, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 85 INSACDDEVEKFERAFLLQLLSSSSSNSNKEFLKQSAADYIKAFDPSSHAFPQREQLQQQ 144
I +A ++++ + L L ++ + LKQ A D++ P H+ + +Q +Q
Sbjct: 10139 IENAAQQKIDEINNSVTLTLEQKEAAIAEVNKLKQQAIDHVNN-APDVHSVEEIQQQEQA 10197
Query: 145 YCDKVHPEPF 154
Y ++ +PE F
Sbjct: 10198 YIEQFNPEQF 10207
>sp|A6U1Q5|EBH_STAA2 Extracellular matrix-binding protein ebh OS=Staphylococcus aureus
(strain JH1) GN=ebh PE=4 SV=1
Length = 10624
Score = 33.1 bits (74), Expect = 4.6, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 85 INSACDDEVEKFERAFLLQLLSSSSSNSNKEFLKQSAADYIKAFDPSSHAFPQREQLQQQ 144
I +A ++++ + L L ++ + LKQ A D++ P H+ + +Q +Q
Sbjct: 10139 IENAAQQKIDEINNSVTLTLEQKEAAIAEVNKLKQQAIDHVNN-APDVHSVEEIQQQEQA 10197
Query: 145 YCDKVHPEPF 154
Y ++ +PE F
Sbjct: 10198 YIEQFNPEQF 10207
>sp|Q99U54|EBHA_STAAN Extracellular matrix-binding protein EbhA OS=Staphylococcus aureus
(strain N315) GN=ebhA PE=4 SV=1
Length = 6713
Score = 32.7 bits (73), Expect = 4.9, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 85 INSACDDEVEKFERAFLLQLLSSSSSNSNKEFLKQSAADYIKAFDPSSHAFPQREQLQQQ 144
I +A ++++ + L L ++ + LKQ A D++ P H+ + +Q +Q
Sbjct: 6228 IENAAQQKIDEINNSVTLTLEQKEAAIAEVNKLKQQAIDHVNN-APDVHSVEEIQQQEQA 6286
Query: 145 YCDKVHPEPF 154
Y ++ +PE F
Sbjct: 6287 YIEQFNPEQF 6296
>sp|Q931R6|EBHA_STAAM Extracellular matrix-binding protein EbhA OS=Staphylococcus aureus
(strain Mu50 / ATCC 700699) GN=ebhA PE=1 SV=1
Length = 6713
Score = 32.7 bits (73), Expect = 4.9, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 85 INSACDDEVEKFERAFLLQLLSSSSSNSNKEFLKQSAADYIKAFDPSSHAFPQREQLQQQ 144
I +A ++++ + L L ++ + LKQ A D++ P H+ + +Q +Q
Sbjct: 6228 IENAAQQKIDEINNSVTLTLEQKEAAIAEVNKLKQQAIDHVNN-APDVHSVEEIQQQEQA 6286
Query: 145 YCDKVHPEPF 154
Y ++ +PE F
Sbjct: 6287 YIEQFNPEQF 6296
>sp|A7X2C3|EBHA_STAA1 Extracellular matrix-binding protein EbhA OS=Staphylococcus aureus
(strain Mu3 / ATCC 700698) GN=ebhA PE=4 SV=1
Length = 6713
Score = 32.7 bits (73), Expect = 4.9, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 85 INSACDDEVEKFERAFLLQLLSSSSSNSNKEFLKQSAADYIKAFDPSSHAFPQREQLQQQ 144
I +A ++++ + L L ++ + LKQ A D++ P H+ + +Q +Q
Sbjct: 6228 IENAAQQKIDEINNSVTLTLEQKEAAIAEVNKLKQQAIDHVNN-APDVHSVEEIQQQEQA 6286
Query: 145 YCDKVHPEPF 154
Y ++ +PE F
Sbjct: 6287 YIEQFNPEQF 6296
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 156,285,161
Number of Sequences: 539616
Number of extensions: 6607513
Number of successful extensions: 16243
Number of sequences better than 100.0: 23
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 16219
Number of HSP's gapped (non-prelim): 28
length of query: 419
length of database: 191,569,459
effective HSP length: 120
effective length of query: 299
effective length of database: 126,815,539
effective search space: 37917846161
effective search space used: 37917846161
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)