BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014733
(419 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 229 bits (585), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 112/264 (42%), Positives = 162/264 (61%), Gaps = 1/264 (0%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKL 97
SDRY + LG G FG + C DK TG+ A K I+K ++ D S+ E++++ +L
Sbjct: 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 98 SGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYC 157
HPN++ L +E++ Y +L+ E+ GGELF + RFSE +A I R ++ ++Y
Sbjct: 84 D-HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYM 142
Query: 158 HGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAG 217
H N +VHRDLKPEN+LL +KS + I++ DFGL+T+ +A + + +G+ +YIAPEVL G
Sbjct: 143 HKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG 202
Query: 218 GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLI 277
Y++ DVWS GVILYILLSG PPF G + I V F W +S SA+DLI
Sbjct: 203 TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLI 262
Query: 278 MGMLRVDPSTRLTAAEVLAHSWME 301
ML PS R++A + L H W++
Sbjct: 263 RKMLTYVPSMRISARDALDHEWIQ 286
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 229 bits (585), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 112/264 (42%), Positives = 162/264 (61%), Gaps = 1/264 (0%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKL 97
SDRY + LG G FG + C DK TG+ A K I+K ++ D S+ E++++ +L
Sbjct: 47 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 106
Query: 98 SGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYC 157
HPN++ L +E++ Y +L+ E+ GGELF + RFSE +A I R ++ ++Y
Sbjct: 107 D-HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYM 165
Query: 158 HGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAG 217
H N +VHRDLKPEN+LL +KS + I++ DFGL+T+ +A + + +G+ +YIAPEVL G
Sbjct: 166 HKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG 225
Query: 218 GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLI 277
Y++ DVWS GVILYILLSG PPF G + I V F W +S SA+DLI
Sbjct: 226 TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLI 285
Query: 278 MGMLRVDPSTRLTAAEVLAHSWME 301
ML PS R++A + L H W++
Sbjct: 286 RKMLTYVPSMRISARDALDHEWIQ 309
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 229 bits (584), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 112/264 (42%), Positives = 162/264 (61%), Gaps = 1/264 (0%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKL 97
SDRY + LG G FG + C DK TG+ A K I+K ++ D S+ E++++ +L
Sbjct: 48 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 107
Query: 98 SGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYC 157
HPN++ L +E++ Y +L+ E+ GGELF + RFSE +A I R ++ ++Y
Sbjct: 108 D-HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYM 166
Query: 158 HGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAG 217
H N +VHRDLKPEN+LL +KS + I++ DFGL+T+ +A + + +G+ +YIAPEVL G
Sbjct: 167 HKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG 226
Query: 218 GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLI 277
Y++ DVWS GVILYILLSG PPF G + I V F W +S SA+DLI
Sbjct: 227 TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLI 286
Query: 278 MGMLRVDPSTRLTAAEVLAHSWME 301
ML PS R++A + L H W++
Sbjct: 287 RKMLTYVPSMRISARDALDHEWIQ 310
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 228 bits (581), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 112/264 (42%), Positives = 162/264 (61%), Gaps = 1/264 (0%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKL 97
SDRY + LG G FG + C DK TG+ A K I+K ++ D S+ E++++ +L
Sbjct: 30 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 89
Query: 98 SGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYC 157
HPN++ L +E++ Y +L+ E+ GGELF + RFSE +A I R ++ ++Y
Sbjct: 90 D-HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYM 148
Query: 158 HGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAG 217
H N +VHRDLKPEN+LL +KS + I++ DFGL+T+ +A + + +G+ +YIAPEVL G
Sbjct: 149 HKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG 208
Query: 218 GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLI 277
Y++ DVWS GVILYILLSG PPF G + I V F W +S SA+DLI
Sbjct: 209 TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLI 268
Query: 278 MGMLRVDPSTRLTAAEVLAHSWME 301
ML PS R++A + L H W++
Sbjct: 269 RKMLTYVPSMRISARDALDHEWIQ 292
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 226 bits (577), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 115/308 (37%), Positives = 181/308 (58%), Gaps = 8/308 (2%)
Query: 36 SNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMT 95
+ SD Y + ++LG G F V+R C K TG A K I +L + D + ++ E I
Sbjct: 25 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICR 83
Query: 96 KLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVS 155
KL HPN+V L +EE + +L+ +L GGELF + +SE +A + +++ ++
Sbjct: 84 KLQ-HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIA 142
Query: 156 YCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVL 215
YCH NG+VHR+LKPEN+LLA+K+ + +KLADFGLA + + HG G+P Y++PEVL
Sbjct: 143 YCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVL 202
Query: 216 AGG-YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASAR 274
Y++ D+W+ GVILYILL G PPFW + + +++ ++A +PS WD ++ A+
Sbjct: 203 KKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAK 262
Query: 275 DLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKPCKQDDLCC-----KQLEVGGSSFS 329
LI ML V+P R+TA + L W+ E+VA +QD + C + ++ G+ +
Sbjct: 263 SLIDSMLTVNPKKRITADQALKVPWICNRERVASAIHRQDTVDCLKKFNARRKLKGAILT 322
Query: 330 ATFISRNM 337
+RN+
Sbjct: 323 TMIATRNL 330
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 224 bits (572), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 111/264 (42%), Positives = 159/264 (60%), Gaps = 1/264 (0%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKL 97
SDRY + LG G FG + C DK TG+ A K I+K ++ D S+ E++++ +L
Sbjct: 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 98 SGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYC 157
HPN+ L +E++ Y +L+ E+ GGELF + RFSE +A I R ++ ++Y
Sbjct: 84 D-HPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYX 142
Query: 158 HGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAG 217
H N +VHRDLKPEN+LL +KS + I++ DFGL+T+ +A + +G+ +YIAPEVL G
Sbjct: 143 HKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHG 202
Query: 218 GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLI 277
Y++ DVWS GVILYILLSG PPF G + I V F W +S SA+DLI
Sbjct: 203 TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLI 262
Query: 278 MGMLRVDPSTRLTAAEVLAHSWME 301
L PS R++A + L H W++
Sbjct: 263 RKXLTYVPSXRISARDALDHEWIQ 286
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 224 bits (571), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 112/284 (39%), Positives = 171/284 (60%), Gaps = 3/284 (1%)
Query: 36 SNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMT 95
+ SD Y + ++LG G F V+R C K TG A K I +L + D + ++ E I
Sbjct: 2 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICR 60
Query: 96 KLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVS 155
KL HPN+V L +EE + +L+ +L GGELF + +SE +A + +++ ++
Sbjct: 61 KLQ-HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIA 119
Query: 156 YCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVL 215
YCH NG+VHR+LKPEN+LLA+K+ + +KLADFGLA + + HG G+P Y++PEVL
Sbjct: 120 YCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVL 179
Query: 216 AGG-YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASAR 274
Y++ D+W+ GVILYILL G PPFW + + +++ ++A +PS WD ++ A+
Sbjct: 180 KKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAK 239
Query: 275 DLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKPCKQDDLCC 318
LI ML V+P R+TA + L W+ E+VA +QD + C
Sbjct: 240 SLIDSMLTVNPKKRITADQALKVPWICNRERVASAIHRQDXVDC 283
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 224 bits (570), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 112/284 (39%), Positives = 171/284 (60%), Gaps = 3/284 (1%)
Query: 36 SNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMT 95
+ SD Y + ++LG G F V+R C K TG A K I +L + D + ++ E I
Sbjct: 1 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICR 59
Query: 96 KLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVS 155
KL HPN+V L +EE + +L+ +L GGELF + +SE +A + +++ ++
Sbjct: 60 KLQ-HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIA 118
Query: 156 YCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVL 215
YCH NG+VHR+LKPEN+LLA+K+ + +KLADFGLA + + HG G+P Y++PEVL
Sbjct: 119 YCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVL 178
Query: 216 AGG-YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASAR 274
Y++ D+W+ GVILYILL G PPFW + + +++ ++A +PS WD ++ A+
Sbjct: 179 KKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAK 238
Query: 275 DLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKPCKQDDLCC 318
LI ML V+P R+TA + L W+ E+VA +QD + C
Sbjct: 239 SLIDSMLTVNPKKRITADQALKVPWICNRERVASAIHRQDXVDC 282
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 221 bits (562), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 116/308 (37%), Positives = 182/308 (59%), Gaps = 9/308 (2%)
Query: 37 NLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTK 96
+++D Y L ++LG G F V+R C TG+ A K I +L + D + ++ E I +
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKL-SARDHQKLEREARI-CR 58
Query: 97 LSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSY 156
L HPN+V L EE + +L+ +L GGELF + +SE +A + +++ V++
Sbjct: 59 LLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNH 118
Query: 157 CHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN-LHGTVGSPFYIAPEVL 215
CH NG+VHRDLKPEN+LLA+KS + +KLADFGLA ++ Q G G+P Y++PEVL
Sbjct: 119 CHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVL 178
Query: 216 -AGGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASAR 274
Y + D+W+ GVILYILL G PPFW + + +++ ++A FPS WD ++ A+
Sbjct: 179 RKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAK 238
Query: 275 DLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKPCKQDDLCC-----KQLEVGGSSFS 329
DLI ML ++P+ R+TA+E L H W+ + VA +Q+ + C + ++ G+ +
Sbjct: 239 DLINKMLTINPAKRITASEALKHPWICQRSTVASMMHRQETVDCLKKFNARRKLKGAILT 298
Query: 330 ATFISRNM 337
+RN
Sbjct: 299 TMLATRNF 306
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 219 bits (558), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 113/284 (39%), Positives = 173/284 (60%), Gaps = 4/284 (1%)
Query: 37 NLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTK 96
+++D Y L ++LG G F V+R C TG+ A K I +L + D + ++ E I +
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKL-SARDHQKLEREARI-CR 58
Query: 97 LSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSY 156
L HPN+V L EE + +L+ +L GGELF + +SE +A + +++ V++
Sbjct: 59 LLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNH 118
Query: 157 CHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN-LHGTVGSPFYIAPEVL 215
CH NG+VHRDLKPEN+LLA+KS + +KLADFGLA ++ Q G G+P Y++PEVL
Sbjct: 119 CHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVL 178
Query: 216 -AGGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASAR 274
Y + D+W+ GVILYILL G PPFW + + +++ ++A FPS WD ++ A+
Sbjct: 179 RKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAK 238
Query: 275 DLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKPCKQDDLCC 318
DLI ML ++P+ R+TA+E L H W+ + VA +Q+ + C
Sbjct: 239 DLINKMLTINPAKRITASEALKHPWICQRSTVASMMHRQETVDC 282
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 219 bits (557), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 111/265 (41%), Positives = 156/265 (58%), Gaps = 2/265 (0%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKL 97
++RY + LG G FG + +C D+ T + A K I K +D +I E+E++ KL
Sbjct: 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKAS-AKNKDTSTILREVELLKKL 78
Query: 98 SGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYC 157
HPN++ L + E+ +++ EL GGELF + K RFSE +A I + + ++Y
Sbjct: 79 D-HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYM 137
Query: 158 HGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAG 217
H + +VHRDLKPENILL +K IK+ DFGL+T + + +G+ +YIAPEVL G
Sbjct: 138 HKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG 197
Query: 218 GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLI 277
Y++ DVWSAGVILYILLSG PPF+GK + I V F W IS A+DLI
Sbjct: 198 TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLI 257
Query: 278 MGMLRVDPSTRLTAAEVLAHSWMEE 302
ML PS R+TA + L H W+++
Sbjct: 258 RKMLTFHPSLRITATQCLEHPWIQK 282
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 217 bits (553), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 107/263 (40%), Positives = 157/263 (59%), Gaps = 1/263 (0%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKL 97
LSDRY K+LG G +G + C DK TG A K I K + T + ++ E+ ++ +L
Sbjct: 2 LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 98 SGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYC 157
HPN++ L +E++ +L+ME+ GGELF + +FSE +A VI + ++ +Y
Sbjct: 62 D-HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYL 120
Query: 158 HGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAG 217
H + +VHRDLKPEN+LL +KS + IK+ DFGL+ + + G + +G+ +YIAPEVL
Sbjct: 121 HKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRK 180
Query: 218 GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLI 277
Y++ DVWS GVILYILL G PPF G+T +I V F W +S A+ L+
Sbjct: 181 KYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLV 240
Query: 278 MGMLRVDPSTRLTAAEVLAHSWM 300
ML +PS R++A E L H W+
Sbjct: 241 KLMLTYEPSKRISAEEALNHPWI 263
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 217 bits (552), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 106/266 (39%), Positives = 162/266 (60%), Gaps = 3/266 (1%)
Query: 36 SNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMT 95
+ SD Y + ++LG G F V+R C K TG A K I +L + D + ++ E I
Sbjct: 2 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICR 60
Query: 96 KLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVS 155
KL HPN+V L +EE + +L+ +L GGELF + +SE +A + +++ ++
Sbjct: 61 KLQ-HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIA 119
Query: 156 YCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVL 215
YCH NG+VHR+LKPEN+LLA+K+ + +KLADFGLA + + HG G+P Y++PEVL
Sbjct: 120 YCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVL 179
Query: 216 AGG-YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASAR 274
Y++ D+W+ GVILYILL G PPFW + + +++ ++A +PS WD ++ A+
Sbjct: 180 KKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAK 239
Query: 275 DLIMGMLRVDPSTRLTAAEVLAHSWM 300
LI ML V+P R+TA + L W+
Sbjct: 240 SLIDSMLTVNPKKRITADQALKVPWI 265
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 217 bits (552), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 111/266 (41%), Positives = 156/266 (58%), Gaps = 2/266 (0%)
Query: 37 NLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTK 96
++RY + LG G FG + +C D+ T + A K I K +D +I E+E++ K
Sbjct: 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKAS-AKNKDTSTILREVELLKK 77
Query: 97 LSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSY 156
L HPN++ L + E+ +++ EL GGELF + K RFSE +A I + + ++Y
Sbjct: 78 LD-HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITY 136
Query: 157 CHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLA 216
H + +VHRDLKPENILL +K IK+ DFGL+T + + +G+ +YIAPEVL
Sbjct: 137 MHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLR 196
Query: 217 GGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDL 276
G Y++ DVWSAGVILYILLSG PPF+GK + I V F W IS A+DL
Sbjct: 197 GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDL 256
Query: 277 IMGMLRVDPSTRLTAAEVLAHSWMEE 302
I ML PS R+TA + L H W+++
Sbjct: 257 IRKMLTFHPSLRITATQCLEHPWIQK 282
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 216 bits (551), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 111/266 (41%), Positives = 156/266 (58%), Gaps = 2/266 (0%)
Query: 37 NLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTK 96
++RY + LG G FG + +C D+ T + A K I K +D +I E+E++ K
Sbjct: 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKAS-AKNKDTSTILREVELLKK 77
Query: 97 LSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSY 156
L HPN++ L + E+ +++ EL GGELF + K RFSE +A I + + ++Y
Sbjct: 78 LD-HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITY 136
Query: 157 CHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLA 216
H + +VHRDLKPENILL +K IK+ DFGL+T + + +G+ +YIAPEVL
Sbjct: 137 MHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLR 196
Query: 217 GGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDL 276
G Y++ DVWSAGVILYILLSG PPF+GK + I V F W IS A+DL
Sbjct: 197 GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDL 256
Query: 277 IMGMLRVDPSTRLTAAEVLAHSWMEE 302
I ML PS R+TA + L H W+++
Sbjct: 257 IRKMLTFHPSLRITATQCLEHPWIQK 282
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 215 bits (548), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 107/263 (40%), Positives = 157/263 (59%), Gaps = 1/263 (0%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKL 97
LSDRY K+LG G +G + C DK TG A K I K + T + ++ E+ ++ +L
Sbjct: 19 LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 78
Query: 98 SGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYC 157
HPN++ L +E++ +L+ME+ GGELF + +FSE +A VI + ++ +Y
Sbjct: 79 D-HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYL 137
Query: 158 HGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAG 217
H + +VHRDLKPEN+LL +KS + IK+ DFGL+ + + G + +G+ +YIAPEVL
Sbjct: 138 HKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRK 197
Query: 218 GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLI 277
Y++ DVWS GVILYILL G PPF G+T +I V F W +S A+ L+
Sbjct: 198 KYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLV 257
Query: 278 MGMLRVDPSTRLTAAEVLAHSWM 300
ML +PS R++A E L H W+
Sbjct: 258 KLMLTYEPSKRISAEEALNHPWI 280
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 213 bits (543), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 110/274 (40%), Positives = 154/274 (56%), Gaps = 6/274 (2%)
Query: 37 NLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTK 96
+++ Y L +G G +G ++ K T A K I K VEDV K EIEIM
Sbjct: 23 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPK---YFVEDVDRFKQEIEIMKS 79
Query: 97 LSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSY 156
L HPN++ L +E+ ++L+MELC GGELF R+ F E++A I + ++ V+Y
Sbjct: 80 LD-HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAY 138
Query: 157 CHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLA 216
CH V HRDLKPEN L T S SP+KL DFGLA K G+ + VG+P+Y++P+VL
Sbjct: 139 CHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLE 198
Query: 217 GGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDL 276
G Y D WSAGV++Y+LL G PPF T ++ +R FP W ++S A L
Sbjct: 199 GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESL 258
Query: 277 IMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKP 310
I +L P R+T+ + L H W E +Q++ P
Sbjct: 259 IRRLLTKSPKQRITSLQALEHEWFE--KQLSSSP 290
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 213 bits (543), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 110/274 (40%), Positives = 154/274 (56%), Gaps = 6/274 (2%)
Query: 37 NLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTK 96
+++ Y L +G G +G ++ K T A K I K VEDV K EIEIM
Sbjct: 6 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPK---YFVEDVDRFKQEIEIMKS 62
Query: 97 LSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSY 156
L HPN++ L +E+ ++L+MELC GGELF R+ F E++A I + ++ V+Y
Sbjct: 63 LD-HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAY 121
Query: 157 CHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLA 216
CH V HRDLKPEN L T S SP+KL DFGLA K G+ + VG+P+Y++P+VL
Sbjct: 122 CHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLE 181
Query: 217 GGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDL 276
G Y D WSAGV++Y+LL G PPF T ++ +R FP W ++S A L
Sbjct: 182 GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESL 241
Query: 277 IMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKP 310
I +L P R+T+ + L H W E +Q++ P
Sbjct: 242 IRRLLTKSPKQRITSLQALEHEWFE--KQLSSSP 273
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 211 bits (537), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 112/279 (40%), Positives = 164/279 (58%), Gaps = 4/279 (1%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
Y L ++LG G F V+R C G+ A K I +L + D + ++ E I +L HP
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKL-SARDHQKLEREARI-CRLLKHP 81
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
N+V L EE + +L+ +L GGELF + +SE +A + +++ V +CH G
Sbjct: 82 NIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMG 141
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN-LHGTVGSPFYIAPEVL-AGGY 219
VVHRDLKPEN+LLA+K + +KLADFGLA ++ Q G G+P Y++PEVL Y
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPY 201
Query: 220 NQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMG 279
+ D+W+ GVILYILL G PPFW + + +++ ++A FPS WD ++ A+DLI
Sbjct: 202 GKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINK 261
Query: 280 MLRVDPSTRLTAAEVLAHSWMEECEQVAQKPCKQDDLCC 318
ML ++PS R+TAAE L H W+ VA +Q+ + C
Sbjct: 262 MLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDC 300
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 210 bits (534), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 113/309 (36%), Positives = 175/309 (56%), Gaps = 9/309 (2%)
Query: 36 SNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMT 95
+ ++ Y L ++LG G F V+R C G+ A I +L + D + ++ E I
Sbjct: 7 TRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKL-SARDHQKLEREARI-C 64
Query: 96 KLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVS 155
+L HPN+V L EE + +L+ +L GGELF + +SE +A + +++ V
Sbjct: 65 RLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVL 124
Query: 156 YCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN-LHGTVGSPFYIAPEV 214
+CH GVVHR+LKPEN+LLA+K + +KLADFGLA ++ Q G G+P Y++PEV
Sbjct: 125 HCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEV 184
Query: 215 L-AGGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASA 273
L Y + D+W+ GVILYILL G PPFW + + +++ ++A FPS WD ++ A
Sbjct: 185 LRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEA 244
Query: 274 RDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKPCKQDDLCC-----KQLEVGGSSF 328
+DLI ML ++PS R+TAAE L H W+ VA +Q+ + C + ++ G+
Sbjct: 245 KDLINKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLKGAIL 304
Query: 329 SATFISRNM 337
+ +RN
Sbjct: 305 TVMLATRNF 313
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 208 bits (529), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 110/284 (38%), Positives = 166/284 (58%), Gaps = 4/284 (1%)
Query: 37 NLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTK 96
+++D Y L + +G G F V+R C TG A K I +L + D + ++ E I +
Sbjct: 1 SMTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKL-SARDHQKLEREARI-CR 58
Query: 97 LSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSY 156
L H N+V L EE + +L+ +L GGELF + +SE +A + +++ V +
Sbjct: 59 LLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLH 118
Query: 157 CHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN-LHGTVGSPFYIAPEVL 215
CH GVVHRDLKPEN+LLA+K + +KLADFGLA ++ Q G G+P Y++PEVL
Sbjct: 119 CHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVL 178
Query: 216 AG-GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASAR 274
Y + D+W+ GVILYILL G PPFW + + K++ ++A FPS WD ++ A+
Sbjct: 179 RKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAK 238
Query: 275 DLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKPCKQDDLCC 318
+LI ML ++P+ R+TA E L H W+ + VA +Q+ + C
Sbjct: 239 NLINQMLTINPAKRITAHEALKHPWVCQRSTVASMMHRQETVEC 282
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 207 bits (527), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 111/309 (35%), Positives = 176/309 (56%), Gaps = 9/309 (2%)
Query: 36 SNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMT 95
+ +D Y L ++LG G F V+R C K + A K I +L + D + ++ E I
Sbjct: 27 TRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKL-SARDHQKLEREARI-C 84
Query: 96 KLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVS 155
+L HPN+V L EE + +L+ +L GGELF + +SE +A +++ V+
Sbjct: 85 RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVN 144
Query: 156 YCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN-LHGTVGSPFYIAPEV 214
+ H + +VHRDLKPEN+LLA+K + +KLADFGLA ++ Q G G+P Y++PEV
Sbjct: 145 HIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEV 204
Query: 215 L-AGGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASA 273
L Y + D+W+ GVILYILL G PPFW + + K++ ++A FPS WD ++ A
Sbjct: 205 LRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEA 264
Query: 274 RDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKPCKQDDLCC-----KQLEVGGSSF 328
++LI ML ++P+ R+TA + L H W+ + VA +Q+ + C + ++ G+
Sbjct: 265 KNLINQMLTINPAKRITADQALKHPWVCQRSTVASMMHRQETVECLRKFNARRKLKGAIL 324
Query: 329 SATFISRNM 337
+ +SRN
Sbjct: 325 TTMLVSRNF 333
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 204 bits (520), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 104/266 (39%), Positives = 160/266 (60%), Gaps = 2/266 (0%)
Query: 37 NLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTK 96
+LS+ Y K+LG G +G + C DK T A K I K + T + + ++ E+ ++ K
Sbjct: 34 HLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLE-EVAVL-K 91
Query: 97 LSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSY 156
L HPN++ L +E++ +L+ME GGELF + +F+E +A VI + ++ V+Y
Sbjct: 92 LLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTY 151
Query: 157 CHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLA 216
H + +VHRDLKPEN+LL +K + IK+ DFGL+ + + + +G+ +YIAPEVL
Sbjct: 152 LHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLR 211
Query: 217 GGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDL 276
Y++ DVWS GVIL+ILL+G PPF G+T +I V F S W ++S A+DL
Sbjct: 212 KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDL 271
Query: 277 IMGMLRVDPSTRLTAAEVLAHSWMEE 302
I ML+ D R++A + L H W++E
Sbjct: 272 IKQMLQFDSQRRISAQQALEHPWIKE 297
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 202 bits (514), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 107/273 (39%), Positives = 164/273 (60%), Gaps = 10/273 (3%)
Query: 32 ATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEI 91
+ Q +N+ ++ + LG G F + + TG++ A K I K D S++ EI
Sbjct: 1 SMQTTNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSP--AFRD-SSLENEI 57
Query: 92 EIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLM 151
++ K+ H N+V L+ +YE + +L+M+L +GGELF R+ + G ++E +A ++ + ++
Sbjct: 58 AVLKKIK-HENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVL 116
Query: 152 QVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN--LHGTVGSPFY 209
V Y H NG+VHRDLKPEN+L T +S I + DFGL+ K QN + G+P Y
Sbjct: 117 SAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLS---KMEQNGIMSTACGTPGY 173
Query: 210 IAPEVLA-GGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDH 268
+APEVLA Y++A D WS GVI YILL G PPF+ +T+SK+F+ ++ F S WD
Sbjct: 174 VAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDD 233
Query: 269 ISASARDLIMGMLRVDPSTRLTAAEVLAHSWME 301
IS SA+D I +L DP+ R T + L+H W++
Sbjct: 234 ISESAKDFICHLLEKDPNERYTCEKALSHPWID 266
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 201 bits (512), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 104/268 (38%), Positives = 158/268 (58%), Gaps = 4/268 (1%)
Query: 34 QISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEI 93
Q ++ + + LG G F + +K TG++ A K I K L E SI+ EI +
Sbjct: 16 QAEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKES--SIENEIAV 73
Query: 94 MTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQV 153
+ K+ H N+V L+ +YE ++++L+M+L +GGELF R+ + G ++E +A + R ++
Sbjct: 74 LRKIK-HENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDA 132
Query: 154 VSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE 213
V Y H G+VHRDLKPEN+L ++ S I ++DFGL+ G + G+P Y+APE
Sbjct: 133 VYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPE 192
Query: 214 VLAGG-YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISAS 272
VLA Y++A D WS GVI YILL G PPF+ + SK+F+ + A+ F S WD IS S
Sbjct: 193 VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDS 252
Query: 273 ARDLIMGMLRVDPSTRLTAAEVLAHSWM 300
A+D I ++ DP+ R T + H W+
Sbjct: 253 AKDFIRNLMEKDPNKRYTCEQAARHPWI 280
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 199 bits (506), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 107/268 (39%), Positives = 157/268 (58%), Gaps = 4/268 (1%)
Query: 34 QISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEI 93
Q ++ D Y LG G F + DK T +++A K IAK+ L E S++ EI +
Sbjct: 12 QAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEG--SMENEIAV 69
Query: 94 MTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQV 153
+ K+ HPN+V L +YE +++L+M+L +GGELF R+ + G ++E +A + ++
Sbjct: 70 LHKIK-HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDA 128
Query: 154 VSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE 213
V Y H G+VHRDLKPEN+L + S I ++DFGL+ G L G+P Y+APE
Sbjct: 129 VKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPE 188
Query: 214 VLAGG-YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISAS 272
VLA Y++A D WS GVI YILL G PPF+ + +K+F+ + A+ F S WD IS S
Sbjct: 189 VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDS 248
Query: 273 ARDLIMGMLRVDPSTRLTAAEVLAHSWM 300
A+D I ++ DP R T + L H W+
Sbjct: 249 AKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 199 bits (506), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 107/268 (39%), Positives = 157/268 (58%), Gaps = 4/268 (1%)
Query: 34 QISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEI 93
Q ++ D Y LG G F + DK T +++A K IAK+ L E S++ EI +
Sbjct: 12 QAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEG--SMENEIAV 69
Query: 94 MTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQV 153
+ K+ HPN+V L +YE +++L+M+L +GGELF R+ + G ++E +A + ++
Sbjct: 70 LHKIK-HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDA 128
Query: 154 VSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE 213
V Y H G+VHRDLKPEN+L + S I ++DFGL+ G L G+P Y+APE
Sbjct: 129 VKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPE 188
Query: 214 VLA-GGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISAS 272
VLA Y++A D WS GVI YILL G PPF+ + +K+F+ + A+ F S WD IS S
Sbjct: 189 VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDS 248
Query: 273 ARDLIMGMLRVDPSTRLTAAEVLAHSWM 300
A+D I ++ DP R T + L H W+
Sbjct: 249 AKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 199 bits (506), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 107/268 (39%), Positives = 157/268 (58%), Gaps = 4/268 (1%)
Query: 34 QISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEI 93
Q ++ D Y LG G F + DK T +++A K IAK+ L E S++ EI +
Sbjct: 12 QAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEG--SMENEIAV 69
Query: 94 MTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQV 153
+ K+ HPN+V L +YE +++L+M+L +GGELF R+ + G ++E +A + ++
Sbjct: 70 LHKIK-HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDA 128
Query: 154 VSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE 213
V Y H G+VHRDLKPEN+L + S I ++DFGL+ G L G+P Y+APE
Sbjct: 129 VKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPE 188
Query: 214 VLAGG-YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISAS 272
VLA Y++A D WS GVI YILL G PPF+ + +K+F+ + A+ F S WD IS S
Sbjct: 189 VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDS 248
Query: 273 ARDLIMGMLRVDPSTRLTAAEVLAHSWM 300
A+D I ++ DP R T + L H W+
Sbjct: 249 AKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 197 bits (502), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 107/268 (39%), Positives = 156/268 (58%), Gaps = 4/268 (1%)
Query: 34 QISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEI 93
Q ++ D Y LG G F + DK T +++A K IAK L E S++ EI +
Sbjct: 12 QAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEG--SMENEIAV 69
Query: 94 MTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQV 153
+ K+ HPN+V L +YE +++L+M+L +GGELF R+ + G ++E +A + ++
Sbjct: 70 LHKIK-HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDA 128
Query: 154 VSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE 213
V Y H G+VHRDLKPEN+L + S I ++DFGL+ G L G+P Y+APE
Sbjct: 129 VKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPE 188
Query: 214 VLA-GGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISAS 272
VLA Y++A D WS GVI YILL G PPF+ + +K+F+ + A+ F S WD IS S
Sbjct: 189 VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDS 248
Query: 273 ARDLIMGMLRVDPSTRLTAAEVLAHSWM 300
A+D I ++ DP R T + L H W+
Sbjct: 249 AKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 194 bits (493), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 101/273 (36%), Positives = 161/273 (58%), Gaps = 8/273 (2%)
Query: 30 LDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKL 89
+D + LSD + + +LG G ++ C K T + A K + K TV D + ++
Sbjct: 43 IDGSNRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKK----TV-DKKIVRT 97
Query: 90 EIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRH 149
EI ++ +LS HPN++ LK ++E + L++EL GGELF R+ + G +SE +A +
Sbjct: 98 EIGVLLRLS-HPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQ 156
Query: 150 LMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFY 209
+++ V+Y H NG+VHRDLKPEN+L AT + +P+K+ADFGL+ ++ + G+P Y
Sbjct: 157 ILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGY 216
Query: 210 IAPEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGKTKSK-IFDAVRAADLRFPSDPWD 267
APE+L G Y D+WS G+I YILL G PF+ + + +F + + F S WD
Sbjct: 217 CAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWD 276
Query: 268 HISASARDLIMGMLRVDPSTRLTAAEVLAHSWM 300
+S +A+DL+ ++ +DP RLT + L H W+
Sbjct: 277 EVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWV 309
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 192 bits (489), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 109/300 (36%), Positives = 159/300 (53%), Gaps = 15/300 (5%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVD 105
K LG G F + R+C K + + A K I+K + EI + GHPN+V
Sbjct: 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQK------EITALKLCEGHPNIVK 70
Query: 106 LKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHR 165
L V+ ++ + L+MEL GGELF R++K FSETEA I R L+ VS+ H GVVHR
Sbjct: 71 LHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHR 130
Query: 166 DLKPENILLATKSSSSPIKLADFGLATYIKA-GQNLHGTVGSPFYIAPEVL-AGGYNQAA 223
DLKPEN+L ++ + IK+ DFG A Q L + Y APE+L GY+++
Sbjct: 131 DLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESC 190
Query: 224 DVWSAGVILYILLSGMPPFWGKTKS-------KIFDAVRAADLRFPSDPWDHISASARDL 276
D+WS GVILY +LSG PF +S +I ++ D F + W ++S A+DL
Sbjct: 191 DLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDL 250
Query: 277 IMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKPCKQDDLCCKQLEVGGSSFSATFISRN 336
I G+L VDP+ RL + + + W+++ Q++ P D+ + ATF + N
Sbjct: 251 IQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNPLMTPDILGSSGAAVHTCVKATFHAFN 310
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 192 bits (488), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 104/271 (38%), Positives = 156/271 (57%), Gaps = 6/271 (2%)
Query: 36 SNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVE---DVRSIKLEIE 92
S + D Y +G++LG GQF ++R+C K TG+ A K I K RL + I+ E+
Sbjct: 1 SMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVN 60
Query: 93 IMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQ 152
I+ ++ HPN++ L ++E + V L++EL +GGELF L + +E EA + ++
Sbjct: 61 ILREIR-HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILD 119
Query: 153 VVSYCHGNGVVHRDLKPENILLATKSSSSP-IKLADFGLATYIKAGQNLHGTVGSPFYIA 211
V Y H + H DLKPENI+L K+ +P IKL DFG+A I+AG G+P ++A
Sbjct: 120 GVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVA 179
Query: 212 PEVLA-GGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHIS 270
PE++ AD+WS GVI YILLSG PF G+TK + + A + F + + + S
Sbjct: 180 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTS 239
Query: 271 ASARDLIMGMLRVDPSTRLTAAEVLAHSWME 301
A+D I +L DP R+T A+ L HSW++
Sbjct: 240 ELAKDFIRRLLVKDPKRRMTIAQSLEHSWIK 270
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 191 bits (486), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 106/289 (36%), Positives = 156/289 (53%), Gaps = 10/289 (3%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAK---DRLVTVEDVRSI-KLEIEI 93
+ + Y ++LG G +G + C +K A K I K D+ +D ++I K EI
Sbjct: 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEI 93
Query: 94 MTKLS-----GHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
++S HPN++ L V+E++ Y +L+ E GGELF ++ +F E +A I +
Sbjct: 94 YNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMK 153
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
++ + Y H + +VHRD+KPENILL K+S IK+ DFGL+++ L +G+ +
Sbjct: 154 QILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAY 213
Query: 209 YIAPEVLAGGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDH 268
YIAPEVL YN+ DVWS GVI+YILL G PPF G+ I V F + W +
Sbjct: 214 YIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKN 273
Query: 269 ISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKPCKQDDLC 317
IS A++LI ML D + R TA E L W+++ K Q LC
Sbjct: 274 ISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNINKS-DQKTLC 321
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 191 bits (484), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 104/273 (38%), Positives = 156/273 (57%), Gaps = 10/273 (3%)
Query: 36 SNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVE---DVRSIKLEIE 92
S + D Y +G++LG GQF ++R+C K TG+ A K I K RL + I+ E+
Sbjct: 22 SMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVN 81
Query: 93 IMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQ 152
I+ ++ HPN++ L ++E + V L++EL +GGELF L + +E EA + ++
Sbjct: 82 ILREIR-HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILD 140
Query: 153 VVSYCHGNGVVHRDLKPENILLATKSSSSP-IKLADFGLATYIKAGQNLHGTVGSPFYIA 211
V Y H + H DLKPENI+L K+ +P IKL DFG+A I+AG G+P ++A
Sbjct: 141 GVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVA 200
Query: 212 PEVLAGGYNQ---AADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDH 268
PE++ Y AD+WS GVI YILLSG PF G+TK + + A + F + + +
Sbjct: 201 PEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSN 258
Query: 269 ISASARDLIMGMLRVDPSTRLTAAEVLAHSWME 301
S A+D I +L DP R+ A+ L HSW++
Sbjct: 259 TSELAKDFIRRLLVKDPKRRMXIAQSLEHSWIK 291
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 190 bits (483), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/266 (37%), Positives = 153/266 (57%), Gaps = 15/266 (5%)
Query: 48 LGWGQFGVIRECSDKFTGEVLACK--SIAKDRLVT--VEDVR-SIKLEIEIMTKLSGHPN 102
+G G V+R C + TG A K + +RL +E+VR + + E I+ +++GHP+
Sbjct: 102 IGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPH 161
Query: 103 VVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGV 162
++ L YE ++ L+ +L GELF L + SE E R I R L++ VS+ H N +
Sbjct: 162 IITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNI 221
Query: 163 VHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLA------ 216
VHRDLKPENILL + I+L+DFG + +++ G+ L G+P Y+APE+L
Sbjct: 222 VHRDLKPENILL---DDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDET 278
Query: 217 -GGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARD 275
GY + D+W+ GVIL+ LL+G PPFW + + + + +F S WD S++ +D
Sbjct: 279 HPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKD 338
Query: 276 LIMGMLRVDPSTRLTAAEVLAHSWME 301
LI +L+VDP RLTA + L H + E
Sbjct: 339 LISRLLQVDPEARLTAEQALQHPFFE 364
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 190 bits (483), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 102/270 (37%), Positives = 155/270 (57%), Gaps = 6/270 (2%)
Query: 37 NLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVE---DVRSIKLEIEI 93
++ D Y +G++LG GQF ++R+C K TG+ A K I K RL + I+ E+ I
Sbjct: 9 DVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNI 68
Query: 94 MTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQV 153
+ ++ HPN++ L ++E + V L++EL +GGELF L + +E EA + ++
Sbjct: 69 LREIR-HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDG 127
Query: 154 VSYCHGNGVVHRDLKPENILLATKSSSSP-IKLADFGLATYIKAGQNLHGTVGSPFYIAP 212
V Y H + H DLKPENI+L K+ +P IKL DFG+A I+AG G+P ++AP
Sbjct: 128 VHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAP 187
Query: 213 EVLA-GGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISA 271
E++ AD+WS GVI YILLSG PF G+TK + + A + F + + + S
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSE 247
Query: 272 SARDLIMGMLRVDPSTRLTAAEVLAHSWME 301
A+D I +L DP R+ A+ L HSW++
Sbjct: 248 LAKDFIRRLLVKDPKRRMXIAQSLEHSWIK 277
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 189 bits (480), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 100/279 (35%), Positives = 162/279 (58%), Gaps = 8/279 (2%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEI-MTK 96
D Y L + +G G F V+R C ++ TG+ A K + + + + + L+ E +
Sbjct: 22 FEDVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICH 81
Query: 97 LSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGR----FSETEARVIFRHLMQ 152
+ HP++V+L Y + ++++ E G +L + K +SE A R +++
Sbjct: 82 MLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILE 141
Query: 153 VVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYI-KAGQNLHGTVGSPFYIA 211
+ YCH N ++HRD+KPEN+LLA+K +S+P+KL DFG+A + ++G G VG+P ++A
Sbjct: 142 ALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMA 201
Query: 212 PEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHIS 270
PEV+ Y + DVW GVIL+ILLSG PF+G TK ++F+ + + W HIS
Sbjct: 202 PEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQWSHIS 260
Query: 271 ASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQK 309
SA+DL+ ML +DP+ R+T E L H W++E ++ A K
Sbjct: 261 ESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYK 299
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 189 bits (480), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 99/275 (36%), Positives = 156/275 (56%), Gaps = 12/275 (4%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVT-----VEDVRSIKLEIE 92
L D Y++ K LG G G ++ ++ T + +A K I+K + + +++ EIE
Sbjct: 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 67
Query: 93 IMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQ 152
I+ KL+ HP ++ +K ++ EDY ++++EL GGELF ++ R E ++ F ++
Sbjct: 68 ILKKLN-HPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 125
Query: 153 VVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAP 212
V Y H NG++HRDLKPEN+LL+++ IK+ DFG + + + G+P Y+AP
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 185
Query: 213 EVL----AGGYNQAADVWSAGVILYILLSGMPPF-WGKTKSKIFDAVRAADLRFPSDPWD 267
EVL GYN+A D WS GVIL+I LSG PPF +T+ + D + + F + W
Sbjct: 186 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 245
Query: 268 HISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEE 302
+S A DL+ +L VDP R T E L H W+++
Sbjct: 246 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 189 bits (480), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 99/275 (36%), Positives = 156/275 (56%), Gaps = 12/275 (4%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVT-----VEDVRSIKLEIE 92
L D Y++ K LG G G ++ ++ T + +A K I+K + + +++ EIE
Sbjct: 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 67
Query: 93 IMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQ 152
I+ KL+ HP ++ +K ++ EDY ++++EL GGELF ++ R E ++ F ++
Sbjct: 68 ILKKLN-HPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 125
Query: 153 VVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAP 212
V Y H NG++HRDLKPEN+LL+++ IK+ DFG + + + G+P Y+AP
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 185
Query: 213 EVL----AGGYNQAADVWSAGVILYILLSGMPPF-WGKTKSKIFDAVRAADLRFPSDPWD 267
EVL GYN+A D WS GVIL+I LSG PPF +T+ + D + + F + W
Sbjct: 186 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 245
Query: 268 HISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEE 302
+S A DL+ +L VDP R T E L H W+++
Sbjct: 246 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 189 bits (480), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 99/275 (36%), Positives = 156/275 (56%), Gaps = 12/275 (4%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVT-----VEDVRSIKLEIE 92
L D Y++ K LG G G ++ ++ T + +A K I+K + + +++ EIE
Sbjct: 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 67
Query: 93 IMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQ 152
I+ KL+ HP ++ +K ++ EDY ++++EL GGELF ++ R E ++ F ++
Sbjct: 68 ILKKLN-HPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 125
Query: 153 VVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAP 212
V Y H NG++HRDLKPEN+LL+++ IK+ DFG + + + G+P Y+AP
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 185
Query: 213 EVL----AGGYNQAADVWSAGVILYILLSGMPPF-WGKTKSKIFDAVRAADLRFPSDPWD 267
EVL GYN+A D WS GVIL+I LSG PPF +T+ + D + + F + W
Sbjct: 186 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 245
Query: 268 HISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEE 302
+S A DL+ +L VDP R T E L H W+++
Sbjct: 246 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 189 bits (480), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 99/275 (36%), Positives = 156/275 (56%), Gaps = 12/275 (4%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVT-----VEDVRSIKLEIE 92
L D Y++ K LG G G ++ ++ T + +A K I+K + + +++ EIE
Sbjct: 7 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 66
Query: 93 IMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQ 152
I+ KL+ HP ++ +K ++ EDY ++++EL GGELF ++ R E ++ F ++
Sbjct: 67 ILKKLN-HPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 124
Query: 153 VVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAP 212
V Y H NG++HRDLKPEN+LL+++ IK+ DFG + + + G+P Y+AP
Sbjct: 125 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 184
Query: 213 EVL----AGGYNQAADVWSAGVILYILLSGMPPF-WGKTKSKIFDAVRAADLRFPSDPWD 267
EVL GYN+A D WS GVIL+I LSG PPF +T+ + D + + F + W
Sbjct: 185 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 244
Query: 268 HISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEE 302
+S A DL+ +L VDP R T E L H W+++
Sbjct: 245 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 279
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 189 bits (479), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 99/275 (36%), Positives = 156/275 (56%), Gaps = 12/275 (4%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVT-----VEDVRSIKLEIE 92
L D Y++ K LG G G ++ ++ T + +A K I+K + + +++ EIE
Sbjct: 14 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 73
Query: 93 IMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQ 152
I+ KL+ HP ++ +K ++ EDY ++++EL GGELF ++ R E ++ F ++
Sbjct: 74 ILKKLN-HPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 131
Query: 153 VVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAP 212
V Y H NG++HRDLKPEN+LL+++ IK+ DFG + + + G+P Y+AP
Sbjct: 132 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 191
Query: 213 EVL----AGGYNQAADVWSAGVILYILLSGMPPF-WGKTKSKIFDAVRAADLRFPSDPWD 267
EVL GYN+A D WS GVIL+I LSG PPF +T+ + D + + F + W
Sbjct: 192 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 251
Query: 268 HISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEE 302
+S A DL+ +L VDP R T E L H W+++
Sbjct: 252 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 286
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 188 bits (477), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 108/273 (39%), Positives = 152/273 (55%), Gaps = 12/273 (4%)
Query: 37 NLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRL------VTVEDVRSIKLE 90
N+ D Y G++LG GQF V+++C +K TG A K I K R V+ ED I+ E
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED---IERE 64
Query: 91 IEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHL 150
+ I+ ++ HPNV+ L VYE + V L++EL AGGELF L + +E EA + +
Sbjct: 65 VSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 151 MQVVSYCHGNGVVHRDLKPENILLATKSSSSP-IKLADFGLATYIKAGQNLHGTVGSPFY 209
+ V Y H + H DLKPENI+L ++ P IK+ DFGLA I G G+P +
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAF 183
Query: 210 IAPEVLA-GGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDH 268
+APE++ AD+WS GVI YILLSG PF G TK + V A + F + + +
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN 243
Query: 269 ISASARDLIMGMLRVDPSTRLTAAEVLAHSWME 301
SA A+D I +L DP R+T + L H W++
Sbjct: 244 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 188 bits (477), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 168/312 (53%), Gaps = 19/312 (6%)
Query: 3 TNNSEDSSQLSTQFCNSYKVSSLTGTILDATQI--SNLSDRYVLGKQLGWGQFGVIRECS 60
NNSE + LS KV +D + L D Y++ K LG G G ++
Sbjct: 115 NNNSEIALSLSRN-----KVFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAF 169
Query: 61 DKFTGEVLACKSIAKDRLVT-----VEDVRSIKLEIEIMTKLSGHPNVVDLKAVYEEEDY 115
++ T + +A + I+K + + +++ EIEI+ KL+ HP ++ +K ++ EDY
Sbjct: 170 ERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLN-HPCIIKIKNFFDAEDY 228
Query: 116 VHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLA 175
++++EL GGELF ++ R E ++ F ++ V Y H NG++HRDLKPEN+LL+
Sbjct: 229 -YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLS 287
Query: 176 TKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVL----AGGYNQAADVWSAGVI 231
++ IK+ DFG + + + G+P Y+APEVL GYN+A D WS GVI
Sbjct: 288 SQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI 347
Query: 232 LYILLSGMPPF-WGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLT 290
L+I LSG PPF +T+ + D + + F + W +S A DL+ +L VDP R T
Sbjct: 348 LFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFT 407
Query: 291 AAEVLAHSWMEE 302
E L H W+++
Sbjct: 408 TEEALRHPWLQD 419
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 187 bits (476), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 109/275 (39%), Positives = 153/275 (55%), Gaps = 16/275 (5%)
Query: 37 NLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRL------VTVEDVRSIKLE 90
N+ D Y G++LG GQF V+++C +K TG A K I K R V+ ED I+ E
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED---IERE 64
Query: 91 IEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHL 150
+ I+ ++ HPNV+ L VYE + V L++EL AGGELF L + +E EA + +
Sbjct: 65 VSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 151 MQVVSYCHGNGVVHRDLKPENILLATKSSSSP-IKLADFGLATYIKAGQNLHGTVGSPFY 209
+ V Y H + H DLKPENI+L ++ P IK+ DFGLA I G G+P +
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 183
Query: 210 IAPEVLAGGYNQ---AADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
+APE++ Y AD+WS GVI YILLSG PF G TK + V A + F + +
Sbjct: 184 VAPEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 241
Query: 267 DHISASARDLIMGMLRVDPSTRLTAAEVLAHSWME 301
+ SA A+D I +L DP R+T + L H W++
Sbjct: 242 SNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 187 bits (476), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 168/312 (53%), Gaps = 19/312 (6%)
Query: 3 TNNSEDSSQLSTQFCNSYKVSSLTGTILDATQI--SNLSDRYVLGKQLGWGQFGVIRECS 60
NNSE + LS KV +D + L D Y++ K LG G G ++
Sbjct: 101 NNNSEIALSLSRN-----KVFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAF 155
Query: 61 DKFTGEVLACKSIAKDRLVT-----VEDVRSIKLEIEIMTKLSGHPNVVDLKAVYEEEDY 115
++ T + +A + I+K + + +++ EIEI+ KL+ HP ++ +K ++ EDY
Sbjct: 156 ERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLN-HPCIIKIKNFFDAEDY 214
Query: 116 VHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLA 175
++++EL GGELF ++ R E ++ F ++ V Y H NG++HRDLKPEN+LL+
Sbjct: 215 -YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLS 273
Query: 176 TKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVL----AGGYNQAADVWSAGVI 231
++ IK+ DFG + + + G+P Y+APEVL GYN+A D WS GVI
Sbjct: 274 SQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI 333
Query: 232 LYILLSGMPPF-WGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLT 290
L+I LSG PPF +T+ + D + + F + W +S A DL+ +L VDP R T
Sbjct: 334 LFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFT 393
Query: 291 AAEVLAHSWMEE 302
E L H W+++
Sbjct: 394 TEEALRHPWLQD 405
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 187 bits (476), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 108/273 (39%), Positives = 152/273 (55%), Gaps = 12/273 (4%)
Query: 37 NLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRL------VTVEDVRSIKLE 90
N+ D Y G++LG GQF V+++C +K TG A K I K R V+ ED I+ E
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED---IERE 64
Query: 91 IEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHL 150
+ I+ ++ HPNV+ L VYE + V L++EL AGGELF L + +E EA + +
Sbjct: 65 VSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 151 MQVVSYCHGNGVVHRDLKPENILLATKSSSSP-IKLADFGLATYIKAGQNLHGTVGSPFY 209
+ V Y H + H DLKPENI+L ++ P IK+ DFGLA I G G+P +
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 183
Query: 210 IAPEVLA-GGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDH 268
+APE++ AD+WS GVI YILLSG PF G TK + V A + F + + +
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN 243
Query: 269 ISASARDLIMGMLRVDPSTRLTAAEVLAHSWME 301
SA A+D I +L DP R+T + L H W++
Sbjct: 244 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 187 bits (475), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 108/273 (39%), Positives = 152/273 (55%), Gaps = 12/273 (4%)
Query: 37 NLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRL------VTVEDVRSIKLE 90
N+ D Y G++LG GQF V+++C +K TG A K I K R V+ ED I+ E
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED---IERE 64
Query: 91 IEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHL 150
+ I+ ++ HPNV+ L VYE + V L++EL AGGELF L + +E EA + +
Sbjct: 65 VSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 151 MQVVSYCHGNGVVHRDLKPENILLATKSSSSP-IKLADFGLATYIKAGQNLHGTVGSPFY 209
+ V Y H + H DLKPENI+L ++ P IK+ DFGLA I G G+P +
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 183
Query: 210 IAPEVLA-GGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDH 268
+APE++ AD+WS GVI YILLSG PF G TK + V A + F + + +
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN 243
Query: 269 ISASARDLIMGMLRVDPSTRLTAAEVLAHSWME 301
SA A+D I +L DP R+T + L H W++
Sbjct: 244 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 187 bits (475), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 109/275 (39%), Positives = 153/275 (55%), Gaps = 16/275 (5%)
Query: 37 NLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRL------VTVEDVRSIKLE 90
N+ D Y G++LG GQF V+++C +K TG A K I K R V+ ED I+ E
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED---IERE 64
Query: 91 IEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHL 150
+ I+ ++ HPNV+ L VYE + V L++EL AGGELF L + +E EA + +
Sbjct: 65 VSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 151 MQVVSYCHGNGVVHRDLKPENILLATKSSSSP-IKLADFGLATYIKAGQNLHGTVGSPFY 209
+ V Y H + H DLKPENI+L ++ P IK+ DFGLA I G G+P +
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 183
Query: 210 IAPEVLAGGYNQ---AADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
+APE++ Y AD+WS GVI YILLSG PF G TK + V A + F + +
Sbjct: 184 VAPEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 241
Query: 267 DHISASARDLIMGMLRVDPSTRLTAAEVLAHSWME 301
+ SA A+D I +L DP R+T + L H W++
Sbjct: 242 SNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 109/275 (39%), Positives = 153/275 (55%), Gaps = 16/275 (5%)
Query: 37 NLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRL------VTVEDVRSIKLE 90
N+ D Y G++LG GQF V+++C +K TG A K I K R V+ ED I+ E
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED---IERE 64
Query: 91 IEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHL 150
+ I+ ++ HPNV+ L VYE + V L++EL AGGELF L + +E EA + +
Sbjct: 65 VSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 151 MQVVSYCHGNGVVHRDLKPENILLATKSSSSP-IKLADFGLATYIKAGQNLHGTVGSPFY 209
+ V Y H + H DLKPENI+L ++ P IK+ DFGLA I G G+P +
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 183
Query: 210 IAPEVLAGGYNQ---AADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
+APE++ Y AD+WS GVI YILLSG PF G TK + V A + F + +
Sbjct: 184 VAPEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 241
Query: 267 DHISASARDLIMGMLRVDPSTRLTAAEVLAHSWME 301
+ SA A+D I +L DP R+T + L H W++
Sbjct: 242 SNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 187 bits (474), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 109/275 (39%), Positives = 153/275 (55%), Gaps = 16/275 (5%)
Query: 37 NLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRL------VTVEDVRSIKLE 90
N+ D Y G++LG GQF V+++C +K TG A K I K R V+ ED I+ E
Sbjct: 7 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED---IERE 63
Query: 91 IEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHL 150
+ I+ ++ HPNV+ L VYE + V L++EL AGGELF L + +E EA + +
Sbjct: 64 VSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 122
Query: 151 MQVVSYCHGNGVVHRDLKPENILLATKSSSSP-IKLADFGLATYIKAGQNLHGTVGSPFY 209
+ V Y H + H DLKPENI+L ++ P IK+ DFGLA I G G+P +
Sbjct: 123 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 182
Query: 210 IAPEVLAGGYNQ---AADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
+APE++ Y AD+WS GVI YILLSG PF G TK + V A + F + +
Sbjct: 183 VAPEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 240
Query: 267 DHISASARDLIMGMLRVDPSTRLTAAEVLAHSWME 301
+ SA A+D I +L DP R+T + L H W++
Sbjct: 241 SNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 187 bits (474), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 108/273 (39%), Positives = 152/273 (55%), Gaps = 12/273 (4%)
Query: 37 NLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRL------VTVEDVRSIKLE 90
N+ D Y G++LG GQF V+++C +K TG A K I K R V+ ED I+ E
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED---IERE 64
Query: 91 IEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHL 150
+ I+ ++ HPNV+ L VYE + V L++EL AGGELF L + +E EA + +
Sbjct: 65 VSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 151 MQVVSYCHGNGVVHRDLKPENILLATKSSSSP-IKLADFGLATYIKAGQNLHGTVGSPFY 209
+ V Y H + H DLKPENI+L ++ P IK+ DFGLA I G G+P +
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 183
Query: 210 IAPEVLA-GGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDH 268
+APE++ AD+WS GVI YILLSG PF G TK + V A + F + + +
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN 243
Query: 269 ISASARDLIMGMLRVDPSTRLTAAEVLAHSWME 301
SA A+D I +L DP R+T + L H W++
Sbjct: 244 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 187 bits (474), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 108/273 (39%), Positives = 152/273 (55%), Gaps = 12/273 (4%)
Query: 37 NLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRL------VTVEDVRSIKLE 90
N+ D Y G++LG GQF V+++C +K TG A K I K R V+ ED I+ E
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED---IERE 64
Query: 91 IEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHL 150
+ I+ ++ HPNV+ L VYE + V L++EL AGGELF L + +E EA + +
Sbjct: 65 VSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 151 MQVVSYCHGNGVVHRDLKPENILLATKSSSSP-IKLADFGLATYIKAGQNLHGTVGSPFY 209
+ V Y H + H DLKPENI+L ++ P IK+ DFGLA I G G+P +
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 183
Query: 210 IAPEVLA-GGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDH 268
+APE++ AD+WS GVI YILLSG PF G TK + V A + F + + +
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN 243
Query: 269 ISASARDLIMGMLRVDPSTRLTAAEVLAHSWME 301
SA A+D I +L DP R+T + L H W++
Sbjct: 244 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 187 bits (474), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 108/273 (39%), Positives = 152/273 (55%), Gaps = 12/273 (4%)
Query: 37 NLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRL------VTVEDVRSIKLE 90
N+ D Y G++LG GQF V+++C +K TG A K I K R V+ ED I+ E
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED---IERE 64
Query: 91 IEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHL 150
+ I+ ++ HPNV+ L VYE + V L++EL AGGELF L + +E EA + +
Sbjct: 65 VSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 151 MQVVSYCHGNGVVHRDLKPENILLATKSSSSP-IKLADFGLATYIKAGQNLHGTVGSPFY 209
+ V Y H + H DLKPENI+L ++ P IK+ DFGLA I G G+P +
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 183
Query: 210 IAPEVLA-GGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDH 268
+APE++ AD+WS GVI YILLSG PF G TK + V A + F + + +
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN 243
Query: 269 ISASARDLIMGMLRVDPSTRLTAAEVLAHSWME 301
SA A+D I +L DP R+T + L H W++
Sbjct: 244 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 187 bits (474), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 109/275 (39%), Positives = 153/275 (55%), Gaps = 16/275 (5%)
Query: 37 NLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRL------VTVEDVRSIKLE 90
N+ D Y G++LG GQF V+++C +K TG A K I K R V+ ED I+ E
Sbjct: 7 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED---IERE 63
Query: 91 IEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHL 150
+ I+ ++ HPNV+ L VYE + V L++EL AGGELF L + +E EA + +
Sbjct: 64 VSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 122
Query: 151 MQVVSYCHGNGVVHRDLKPENILLATKSSSSP-IKLADFGLATYIKAGQNLHGTVGSPFY 209
+ V Y H + H DLKPENI+L ++ P IK+ DFGLA I G G+P +
Sbjct: 123 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 182
Query: 210 IAPEVLAGGYNQ---AADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
+APE++ Y AD+WS GVI YILLSG PF G TK + V A + F + +
Sbjct: 183 VAPEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 240
Query: 267 DHISASARDLIMGMLRVDPSTRLTAAEVLAHSWME 301
+ SA A+D I +L DP R+T + L H W++
Sbjct: 241 SNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 185 bits (470), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 107/273 (39%), Positives = 152/273 (55%), Gaps = 12/273 (4%)
Query: 37 NLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRL------VTVEDVRSIKLE 90
N+ D Y G++LG G+F V+++C +K TG A K I K R V+ ED I+ E
Sbjct: 8 NVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED---IERE 64
Query: 91 IEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHL 150
+ I+ ++ HPNV+ L VYE + V L++EL AGGELF L + +E EA + +
Sbjct: 65 VSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 151 MQVVSYCHGNGVVHRDLKPENILLATKSSSSP-IKLADFGLATYIKAGQNLHGTVGSPFY 209
+ V Y H + H DLKPENI+L ++ P IK+ DFGLA I G G+P +
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 183
Query: 210 IAPEVLA-GGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDH 268
+APE++ AD+WS GVI YILLSG PF G TK + V A + F + + +
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN 243
Query: 269 ISASARDLIMGMLRVDPSTRLTAAEVLAHSWME 301
SA A+D I +L DP R+T + L H W++
Sbjct: 244 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 185 bits (469), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 109/275 (39%), Positives = 152/275 (55%), Gaps = 16/275 (5%)
Query: 37 NLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRL------VTVEDVRSIKLE 90
N+ D Y G++LG GQF V+++C +K TG A K I K R V+ ED I+ E
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED---IERE 64
Query: 91 IEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHL 150
+ I+ ++ HPNV+ L VYE + V L+ EL AGGELF L + +E EA + +
Sbjct: 65 VSILKEIQ-HPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 151 MQVVSYCHGNGVVHRDLKPENILLATKSSSSP-IKLADFGLATYIKAGQNLHGTVGSPFY 209
+ V Y H + H DLKPENI+L ++ P IK+ DFGLA I G G+P +
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 183
Query: 210 IAPEVLAGGYNQ---AADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
+APE++ Y AD+WS GVI YILLSG PF G TK + V A + F + +
Sbjct: 184 VAPEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 241
Query: 267 DHISASARDLIMGMLRVDPSTRLTAAEVLAHSWME 301
+ SA A+D I +L DP R+T + L H W++
Sbjct: 242 SNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 183 bits (465), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 107/273 (39%), Positives = 151/273 (55%), Gaps = 12/273 (4%)
Query: 37 NLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRL------VTVEDVRSIKLE 90
N+ D Y G++LG G F V+++C +K TG A K I K R V+ ED I+ E
Sbjct: 8 NVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED---IERE 64
Query: 91 IEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHL 150
+ I+ ++ HPNV+ L VYE + V L++EL AGGELF L + +E EA + +
Sbjct: 65 VSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 151 MQVVSYCHGNGVVHRDLKPENILLATKSSSSP-IKLADFGLATYIKAGQNLHGTVGSPFY 209
+ V Y H + H DLKPENI+L ++ P IK+ DFGLA I G G+P +
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 183
Query: 210 IAPEVLA-GGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDH 268
+APE++ AD+WS GVI YILLSG PF G TK + V A + F + + +
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN 243
Query: 269 ISASARDLIMGMLRVDPSTRLTAAEVLAHSWME 301
SA A+D I +L DP R+T + L H W++
Sbjct: 244 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 182 bits (463), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 109/309 (35%), Positives = 163/309 (52%), Gaps = 21/309 (6%)
Query: 37 NLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTK 96
+D Y + + +G G + V + C K T A K I K + R EIEI+ +
Sbjct: 19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK-------RDPTEEIEILLR 71
Query: 97 LSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSY 156
HPN++ LK VY++ YV+++ EL GGEL ++ + FSE EA + + + V Y
Sbjct: 72 YGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEY 131
Query: 157 CHGNGVVHRDLKPENILLATKSSS-SPIKLADFGLATYIKAGQNLHGTVGSPFY----IA 211
H GVVHRDLKP NIL +S + I++ DFG A ++A +G + +P Y +A
Sbjct: 132 LHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAE---NGLLMTPCYTANFVA 188
Query: 212 PEVLA-GGYNQAADVWSAGVILYILLSGMPPFWG---KTKSKIFDAVRAADLRFPSDPWD 267
PEVL GY+ A D+WS GV+LY +L+G PF T +I + + W+
Sbjct: 189 PEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWN 248
Query: 268 HISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKPCKQDDLCCKQLEVGGSS 327
+S +A+DL+ ML VDP RLTAA VL H W+ +Q+ Q + D L G +
Sbjct: 249 SVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHWDQLPQYQLNRQD--APHLVKGAMA 306
Query: 328 FSATFISRN 336
+ + ++RN
Sbjct: 307 ATYSALNRN 315
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 182 bits (461), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 101/268 (37%), Positives = 145/268 (54%), Gaps = 16/268 (5%)
Query: 48 LGWGQFGVIRECSDKFTGEVLACKSI-----AKDRLVTVEDVRSIKL-EIEIMTKLSGHP 101
LG G V+R C K T + A K I V+++R L E++I+ K+SGHP
Sbjct: 25 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHP 84
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
N++ LK YE + L+ +L GELF L + SE E R I R L++V+ H
Sbjct: 85 NIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN 144
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLA----- 216
+VHRDLKPENILL + IKL DFG + + G+ L G+P Y+APE++
Sbjct: 145 IVHRDLKPENILLDDDMN---IKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIECSMND 201
Query: 217 --GGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASAR 274
GY + D+WS GVI+Y LL+G PPFW + + + + + + +F S WD S + +
Sbjct: 202 NHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVK 261
Query: 275 DLIMGMLRVDPSTRLTAAEVLAHSWMEE 302
DL+ L V P R TA E LAH + ++
Sbjct: 262 DLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 181 bits (460), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 101/268 (37%), Positives = 145/268 (54%), Gaps = 16/268 (5%)
Query: 48 LGWGQFGVIRECSDKFTGEVLACKSI-----AKDRLVTVEDVRSIKL-EIEIMTKLSGHP 101
LG G V+R C K T + A K I V+++R L E++I+ K+SGHP
Sbjct: 12 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHP 71
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
N++ LK YE + L+ +L GELF L + SE E R I R L++V+ H
Sbjct: 72 NIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN 131
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLA----- 216
+VHRDLKPENILL + IKL DFG + + G+ L G+P Y+APE++
Sbjct: 132 IVHRDLKPENILLDDDMN---IKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMND 188
Query: 217 --GGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASAR 274
GY + D+WS GVI+Y LL+G PPFW + + + + + + +F S WD S + +
Sbjct: 189 NHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVK 248
Query: 275 DLIMGMLRVDPSTRLTAAEVLAHSWMEE 302
DL+ L V P R TA E LAH + ++
Sbjct: 249 DLVSRFLVVQPQKRYTAEEALAHPFFQQ 276
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 181 bits (460), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 108/308 (35%), Positives = 165/308 (53%), Gaps = 24/308 (7%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKL 97
SD YV+ + +G G + + C K T A K I K + R EIEI+ +
Sbjct: 25 FSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSK-------RDPSEEIEILLRY 77
Query: 98 SGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYC 157
HPN++ LK VY++ +V+L+ EL GGEL ++ + FSE EA + + + V Y
Sbjct: 78 GQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYL 137
Query: 158 HGNGVVHRDLKPENILLATKSSSSP-IKLADFGLATYIKAGQNLHGTVGSPFY----IAP 212
H GVVHRDLKP NIL +S + +++ DFG A ++A +G + +P Y +AP
Sbjct: 138 HSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAE---NGLLMTPCYTANFVAP 194
Query: 213 EVLA-GGYNQAADVWSAGVILYILLSGMPPFWG---KTKSKIFDAVRAADLRFPSDPWDH 268
EVL GY++ D+WS G++LY +L+G PF T +I + + W+
Sbjct: 195 EVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNT 254
Query: 269 ISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKPCKQDDLCCKQLEVGGSSF 328
+S +A+DL+ ML VDP RLTA +VL H W+ + +++ Q DL QL G +
Sbjct: 255 VSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKDKLPQSQLSHQDL---QLVKG--AM 309
Query: 329 SATFISRN 336
+AT+ + N
Sbjct: 310 AATYSALN 317
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 181 bits (459), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 101/268 (37%), Positives = 145/268 (54%), Gaps = 16/268 (5%)
Query: 48 LGWGQFGVIRECSDKFTGEVLACKSI-----AKDRLVTVEDVRSIKL-EIEIMTKLSGHP 101
LG G V+R C K T + A K I V+++R L E++I+ K+SGHP
Sbjct: 25 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHP 84
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
N++ LK YE + L+ +L GELF L + SE E R I R L++V+ H
Sbjct: 85 NIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN 144
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLA----- 216
+VHRDLKPENILL + IKL DFG + + G+ L G+P Y+APE++
Sbjct: 145 IVHRDLKPENILLDDDMN---IKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMND 201
Query: 217 --GGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASAR 274
GY + D+WS GVI+Y LL+G PPFW + + + + + + +F S WD S + +
Sbjct: 202 NHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVK 261
Query: 275 DLIMGMLRVDPSTRLTAAEVLAHSWMEE 302
DL+ L V P R TA E LAH + ++
Sbjct: 262 DLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 181 bits (459), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 108/308 (35%), Positives = 165/308 (53%), Gaps = 24/308 (7%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKL 97
SD YV+ + +G G + + C K T A K I K + R EIEI+ +
Sbjct: 25 FSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSK-------RDPSEEIEILLRY 77
Query: 98 SGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYC 157
HPN++ LK VY++ +V+L+ EL GGEL ++ + FSE EA + + + V Y
Sbjct: 78 GQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYL 137
Query: 158 HGNGVVHRDLKPENILLATKSSSSP-IKLADFGLATYIKAGQNLHGTVGSPFY----IAP 212
H GVVHRDLKP NIL +S + +++ DFG A ++A +G + +P Y +AP
Sbjct: 138 HSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAE---NGLLMTPCYTANFVAP 194
Query: 213 EVLA-GGYNQAADVWSAGVILYILLSGMPPFWG---KTKSKIFDAVRAADLRFPSDPWDH 268
EVL GY++ D+WS G++LY +L+G PF T +I + + W+
Sbjct: 195 EVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNT 254
Query: 269 ISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKPCKQDDLCCKQLEVGGSSF 328
+S +A+DL+ ML VDP RLTA +VL H W+ + +++ Q DL QL G +
Sbjct: 255 VSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKDKLPQSQLSHQDL---QLVKG--AM 309
Query: 329 SATFISRN 336
+AT+ + N
Sbjct: 310 AATYSALN 317
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 181 bits (458), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 97/279 (34%), Positives = 159/279 (56%), Gaps = 8/279 (2%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEI-MTK 96
D Y L + +G G F V+R C ++ TG+ A K + + + + + L+ E +
Sbjct: 22 FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICH 81
Query: 97 LSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGR----FSETEARVIFRHLMQ 152
+ HP++V+L Y + ++++ E G +L + K +SE A R +++
Sbjct: 82 MLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILE 141
Query: 153 VVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYI-KAGQNLHGTVGSPFYIA 211
+ YCH N ++HRD+KP +LLA+K +S+P+KL FG+A + ++G G VG+P ++A
Sbjct: 142 ALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMA 201
Query: 212 PEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHIS 270
PEV+ Y + DVW GVIL+ILLSG PF+G TK ++F+ + + W HIS
Sbjct: 202 PEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQWSHIS 260
Query: 271 ASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQK 309
SA+DL+ ML +DP+ R+T E L H W++E ++ A K
Sbjct: 261 ESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYK 299
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 181 bits (458), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 97/279 (34%), Positives = 159/279 (56%), Gaps = 8/279 (2%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEI-MTK 96
D Y L + +G G F V+R C ++ TG+ A K + + + + + L+ E +
Sbjct: 24 FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICH 83
Query: 97 LSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGR----FSETEARVIFRHLMQ 152
+ HP++V+L Y + ++++ E G +L + K +SE A R +++
Sbjct: 84 MLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILE 143
Query: 153 VVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYI-KAGQNLHGTVGSPFYIA 211
+ YCH N ++HRD+KP +LLA+K +S+P+KL FG+A + ++G G VG+P ++A
Sbjct: 144 ALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMA 203
Query: 212 PEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHIS 270
PEV+ Y + DVW GVIL+ILLSG PF+G TK ++F+ + + W HIS
Sbjct: 204 PEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQWSHIS 262
Query: 271 ASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQK 309
SA+DL+ ML +DP+ R+T E L H W++E ++ A K
Sbjct: 263 ESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYK 301
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/309 (34%), Positives = 161/309 (52%), Gaps = 21/309 (6%)
Query: 37 NLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTK 96
+D Y + + +G G + V + C K T A K I K + R EIEI+ +
Sbjct: 19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSK-------RDPTEEIEILLR 71
Query: 97 LSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSY 156
HPN++ LK VY++ YV+++ EL GGEL ++ + FSE EA + + + V Y
Sbjct: 72 YGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEY 131
Query: 157 CHGNGVVHRDLKPENILLATKSSS-SPIKLADFGLATYIKAGQNLHGTVGSPFY----IA 211
H GVVHRDLKP NIL +S + I++ DFG A ++A +G + +P Y +A
Sbjct: 132 LHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAE---NGLLXTPCYTANFVA 188
Query: 212 PEVLA-GGYNQAADVWSAGVILYILLSGMPPFWG---KTKSKIFDAVRAADLRFPSDPWD 267
PEVL GY+ A D+WS GV+LY L+G PF T +I + + W+
Sbjct: 189 PEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWN 248
Query: 268 HISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKPCKQDDLCCKQLEVGGSS 327
+S +A+DL+ L VDP RLTAA VL H W+ +Q+ Q + D L G +
Sbjct: 249 SVSDTAKDLVSKXLHVDPHQRLTAALVLRHPWIVHWDQLPQYQLNRQD--APHLVKGAXA 306
Query: 328 FSATFISRN 336
+ + ++RN
Sbjct: 307 ATYSALNRN 315
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 100/263 (38%), Positives = 150/263 (57%), Gaps = 10/263 (3%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
YVLG LG G FG ++ + TG +A K + + ++ +++ V IK EI+ + KL HP
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNL-KLFRHP 71
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
+++ L V ++ME +GGELF + K+GR E EAR +F+ ++ V YCH +
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHM 131
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAGGY-- 219
VVHRDLKPEN+LL ++ K+ADFGL+ + G+ L + GSP Y APEV++G
Sbjct: 132 VVHRDLKPENVLLDAHMNA---KIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYA 188
Query: 220 NQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMG 279
D+WS GVILY LL G PF + +F +R P ++++ S L+M
Sbjct: 189 GPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIP----EYLNRSVATLLMH 244
Query: 280 MLRVDPSTRLTAAEVLAHSWMEE 302
ML+VDP R T ++ H W ++
Sbjct: 245 MLQVDPLKRATIKDIREHEWFKQ 267
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 100/263 (38%), Positives = 150/263 (57%), Gaps = 10/263 (3%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
YVLG LG G FG ++ + TG +A K + + ++ +++ V IK EI+ + KL HP
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNL-KLFRHP 71
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
+++ L V ++ME +GGELF + K+GR E EAR +F+ ++ V YCH +
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHM 131
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAGGY-- 219
VVHRDLKPEN+LL ++ K+ADFGL+ + G+ L + GSP Y APEV++G
Sbjct: 132 VVHRDLKPENVLLDAHMNA---KIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYA 188
Query: 220 NQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMG 279
D+WS GVILY LL G PF + +F +R P ++++ S L+M
Sbjct: 189 GPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIP----EYLNRSVATLLMH 244
Query: 280 MLRVDPSTRLTAAEVLAHSWMEE 302
ML+VDP R T ++ H W ++
Sbjct: 245 MLQVDPLKRATIKDIREHEWFKQ 267
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 104/271 (38%), Positives = 147/271 (54%), Gaps = 12/271 (4%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKD------RLVTVEDVRSIKLEI 91
+ D Y +G++LG GQF ++++C +K TG A K I K R V E+ I+ E+
Sbjct: 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREE---IEREV 66
Query: 92 EIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLM 151
I+ ++ HPN++ L VYE V L++EL +GGELF L + SE EA + ++
Sbjct: 67 SILRQVL-HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125
Query: 152 QVVSYCHGNGVVHRDLKPENILLATKSSSSP-IKLADFGLATYIKAGQNLHGTVGSPFYI 210
V+Y H + H DLKPENI+L K+ P IKL DFGLA I+ G G+P ++
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFV 185
Query: 211 APEVLA-GGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHI 269
APE++ AD+WS GVI YILLSG PF G TK + + A F + +
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQT 245
Query: 270 SASARDLIMGMLRVDPSTRLTAAEVLAHSWM 300
S A+D I +L + RLT E L H W+
Sbjct: 246 SELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/271 (38%), Positives = 148/271 (54%), Gaps = 12/271 (4%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKD------RLVTVEDVRSIKLEI 91
+ D Y +G++LG GQF ++++C +K TG A K I K R V+ E+ I+ E+
Sbjct: 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREE---IEREV 66
Query: 92 EIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLM 151
I+ ++ H NV+ L VYE V L++EL +GGELF L + SE EA + ++
Sbjct: 67 SILRQVLHH-NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125
Query: 152 QVVSYCHGNGVVHRDLKPENILLATKSSSSP-IKLADFGLATYIKAGQNLHGTVGSPFYI 210
V+Y H + H DLKPENI+L K+ P IKL DFGLA I+ G G+P ++
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFV 185
Query: 211 APEVLA-GGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHI 269
APE++ AD+WS GVI YILLSG PF G TK + + + F + + H
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHT 245
Query: 270 SASARDLIMGMLRVDPSTRLTAAEVLAHSWM 300
S A+D I +L + RLT E L H W+
Sbjct: 246 SELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/271 (38%), Positives = 148/271 (54%), Gaps = 12/271 (4%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKD------RLVTVEDVRSIKLEI 91
+ D Y +G++LG GQF ++++C +K TG A K I K R V+ E+ I+ E+
Sbjct: 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREE---IEREV 66
Query: 92 EIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLM 151
I+ ++ H NV+ L VYE V L++EL +GGELF L + SE EA + ++
Sbjct: 67 SILRQVLHH-NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125
Query: 152 QVVSYCHGNGVVHRDLKPENILLATKSSSSP-IKLADFGLATYIKAGQNLHGTVGSPFYI 210
V+Y H + H DLKPENI+L K+ P IKL DFGLA I+ G G+P ++
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFV 185
Query: 211 APEVLA-GGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHI 269
APE++ AD+WS GVI YILLSG PF G TK + + + F + + H
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHT 245
Query: 270 SASARDLIMGMLRVDPSTRLTAAEVLAHSWM 300
S A+D I +L + RLT E L H W+
Sbjct: 246 SELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/273 (38%), Positives = 148/273 (54%), Gaps = 12/273 (4%)
Query: 36 SNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKD------RLVTVEDVRSIKL 89
+ D Y +G++LG GQF ++++C +K TG A K I K R V+ E+ I+
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREE---IER 64
Query: 90 EIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRH 149
E+ I+ ++ H NV+ L VYE V L++EL +GGELF L + SE EA +
Sbjct: 65 EVSILRQVLHH-NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQ 123
Query: 150 LMQVVSYCHGNGVVHRDLKPENILLATKSSSSP-IKLADFGLATYIKAGQNLHGTVGSPF 208
++ V+Y H + H DLKPENI+L K+ P IKL DFGLA I+ G G+P
Sbjct: 124 ILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE 183
Query: 209 YIAPEVLA-GGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWD 267
++APE++ AD+WS GVI YILLSG PF G TK + + + F + +
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFS 243
Query: 268 HISASARDLIMGMLRVDPSTRLTAAEVLAHSWM 300
H S A+D I +L + RLT E L H W+
Sbjct: 244 HTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 172 bits (435), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 104/271 (38%), Positives = 147/271 (54%), Gaps = 12/271 (4%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKD------RLVTVEDVRSIKLEI 91
+ D Y +G++LG GQF ++++C +K TG A K I K R V+ E+ I+ E+
Sbjct: 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREE---IEREV 66
Query: 92 EIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLM 151
I+ ++ H NV+ L VYE V L++EL +GGELF L + SE EA + ++
Sbjct: 67 SILRQVLHH-NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125
Query: 152 QVVSYCHGNGVVHRDLKPENILLATKSSSSP-IKLADFGLATYIKAGQNLHGTVGSPFYI 210
V+Y H + H DLKPENI+L K+ P IKL DFGLA I+ G G+P ++
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFV 185
Query: 211 APEVLA-GGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHI 269
APE++ AD+WS GVI YILLSG PF G TK + + A F + +
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQT 245
Query: 270 SASARDLIMGMLRVDPSTRLTAAEVLAHSWM 300
S A+D I +L + RLT E L H W+
Sbjct: 246 SELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 171 bits (434), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 106/266 (39%), Positives = 144/266 (54%), Gaps = 10/266 (3%)
Query: 39 SDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLS 98
SDRY L K +G G FGV R DK + E++A K I + + ++K EI I +
Sbjct: 17 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKID----ENVKREI-INHRSL 71
Query: 99 GHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCH 158
HPN+V K V ++ ++ME +GGELF R+ GRFSE EAR F+ L+ VSYCH
Sbjct: 72 RHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCH 131
Query: 159 GNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEV-LAG 217
V HRDLK EN LL S + +K+ DFG + TVG+P YIAPEV L
Sbjct: 132 AMQVCHRDLKLENTLL-DGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKK 190
Query: 218 GYN-QAADVWSAGVILYILLSGMPPFWGKTKSKIFDAV--RAADLRFPSDPWDHISASAR 274
Y+ + ADVWS GV LY++L G PF + K F R ++++ + HIS R
Sbjct: 191 EYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECR 250
Query: 275 DLIMGMLRVDPSTRLTAAEVLAHSWM 300
LI + DP+ R++ E+ H W
Sbjct: 251 HLISRIFVADPAKRISIPEIRNHEWF 276
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 171 bits (434), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 106/266 (39%), Positives = 144/266 (54%), Gaps = 10/266 (3%)
Query: 39 SDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLS 98
SDRY L K +G G FGV R DK + E++A K I + + ++K EI I +
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAA----NVKREI-INHRSL 72
Query: 99 GHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCH 158
HPN+V K V ++ ++ME +GGELF R+ GRFSE EAR F+ L+ VSYCH
Sbjct: 73 RHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCH 132
Query: 159 GNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEV-LAG 217
V HRDLK EN LL S + +K+ DFG + TVG+P YIAPEV L
Sbjct: 133 AMQVCHRDLKLENTLL-DGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKK 191
Query: 218 GYN-QAADVWSAGVILYILLSGMPPFWGKTKSKIFDAV--RAADLRFPSDPWDHISASAR 274
Y+ + ADVWS GV LY++L G PF + K F R ++++ + HIS R
Sbjct: 192 EYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECR 251
Query: 275 DLIMGMLRVDPSTRLTAAEVLAHSWM 300
LI + DP+ R++ E+ H W
Sbjct: 252 HLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 171 bits (433), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 104/271 (38%), Positives = 147/271 (54%), Gaps = 12/271 (4%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKD------RLVTVEDVRSIKLEI 91
+ D Y +G++LG GQF ++++C +K TG A K I K R V+ E+ I+ E+
Sbjct: 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREE---IEREV 66
Query: 92 EIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLM 151
I+ ++ H NV+ L VYE V L++EL +GGELF L + SE EA + ++
Sbjct: 67 SILRQVLHH-NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125
Query: 152 QVVSYCHGNGVVHRDLKPENILLATKSSSSP-IKLADFGLATYIKAGQNLHGTVGSPFYI 210
V+Y H + H DLKPENI+L K+ P IKL DFGLA I+ G G+P ++
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFV 185
Query: 211 APEVLA-GGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHI 269
APE++ AD+WS GVI YILLSG PF G TK + + A F + +
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQT 245
Query: 270 SASARDLIMGMLRVDPSTRLTAAEVLAHSWM 300
S A+D I +L + RLT E L H W+
Sbjct: 246 SELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 95/263 (36%), Positives = 147/263 (55%), Gaps = 10/263 (3%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
Y+LG LG G FG ++ + TG +A K + + ++ +++ V I+ EI+ + KL HP
Sbjct: 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNL-KLFRHP 76
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
+++ L V + ++ME +GGELF + K GR E E+R +F+ ++ V YCH +
Sbjct: 77 HIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHM 136
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAGGY-- 219
VVHRDLKPEN+LL ++ K+ADFGL+ + G+ L + GSP Y APEV++G
Sbjct: 137 VVHRDLKPENVLLDAHMNA---KIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYA 193
Query: 220 NQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMG 279
D+WS+GVILY LL G PF +F + P +++ S L+
Sbjct: 194 GPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQ----YLNPSVISLLKH 249
Query: 280 MLRVDPSTRLTAAEVLAHSWMEE 302
ML+VDP R T ++ H W ++
Sbjct: 250 MLQVDPMKRATIKDIREHEWFKQ 272
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 101/286 (35%), Positives = 153/286 (53%), Gaps = 23/286 (8%)
Query: 38 LSDRYVLGKQ-LGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTK 96
++D Y L KQ LG G G + EC + TG+ A K + D + E++ +
Sbjct: 7 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLY--------DSPKARQEVDHHWQ 58
Query: 97 LSGHPNVVDLKAVYEEEDY----VHLLMELCAGGELFHRLEKYG--RFSETEARVIFRHL 150
SG P++V + VYE + + ++ME GGELF R+++ G F+E EA I R +
Sbjct: 59 ASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDI 118
Query: 151 MQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN-LHGTVGSPFY 209
+ + H + + HRD+KPEN+L +K + +KL DFG A + QN L +P+Y
Sbjct: 119 GTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK--ETTQNALQTPCYTPYY 176
Query: 210 IAPEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDA----VRAADLRFPSD 264
+APEVL Y+++ D+WS GVI+YILL G PPF+ T I +R FP+
Sbjct: 177 VAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNP 236
Query: 265 PWDHISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKP 310
W +S A+ LI +L+ DP+ RLT + + H W+ + V Q P
Sbjct: 237 EWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTP 282
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 101/286 (35%), Positives = 153/286 (53%), Gaps = 23/286 (8%)
Query: 38 LSDRYVLGKQ-LGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTK 96
++D Y L KQ LG G G + EC + TG+ A K + D + E++ +
Sbjct: 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLY--------DSPKARQEVDHHWQ 77
Query: 97 LSGHPNVVDLKAVYEEEDY----VHLLMELCAGGELFHRLEKYG--RFSETEARVIFRHL 150
SG P++V + VYE + + ++ME GGELF R+++ G F+E EA I R +
Sbjct: 78 ASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDI 137
Query: 151 MQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN-LHGTVGSPFY 209
+ + H + + HRD+KPEN+L +K + +KL DFG A + QN L +P+Y
Sbjct: 138 GTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK--ETTQNALQTPCYTPYY 195
Query: 210 IAPEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDA----VRAADLRFPSD 264
+APEVL Y+++ D+WS GVI+YILL G PPF+ T I +R FP+
Sbjct: 196 VAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNP 255
Query: 265 PWDHISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKP 310
W +S A+ LI +L+ DP+ RLT + + H W+ + V Q P
Sbjct: 256 EWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTP 301
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 168 bits (425), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 105/266 (39%), Positives = 143/266 (53%), Gaps = 10/266 (3%)
Query: 39 SDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLS 98
SDRY L K +G G FGV R DK + E++A K I + + ++K EI I +
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKID----ENVKREI-INHRSL 72
Query: 99 GHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCH 158
HPN+V K V ++ ++ME +GGELF R+ GRFSE EAR F+ L+ VSYCH
Sbjct: 73 RHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCH 132
Query: 159 GNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEV-LAG 217
V HRDLK EN LL S + +K+ FG + TVG+P YIAPEV L
Sbjct: 133 AMQVCHRDLKLENTLL-DGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKK 191
Query: 218 GYN-QAADVWSAGVILYILLSGMPPFWGKTKSKIFDAV--RAADLRFPSDPWDHISASAR 274
Y+ + ADVWS GV LY++L G PF + K F R ++++ + HIS R
Sbjct: 192 EYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECR 251
Query: 275 DLIMGMLRVDPSTRLTAAEVLAHSWM 300
LI + DP+ R++ E+ H W
Sbjct: 252 HLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 167 bits (424), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 105/266 (39%), Positives = 143/266 (53%), Gaps = 10/266 (3%)
Query: 39 SDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLS 98
SDRY L K +G G FGV R DK + E++A K I + + ++K EI I +
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKID----ENVKREI-INHRSL 72
Query: 99 GHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCH 158
HPN+V K V ++ ++ME +GGELF R+ GRFSE EAR F+ L+ VSYCH
Sbjct: 73 RHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCH 132
Query: 159 GNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEV-LAG 217
V HRDLK EN LL S + +K+ FG + TVG+P YIAPEV L
Sbjct: 133 AMQVCHRDLKLENTLL-DGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLKK 191
Query: 218 GYN-QAADVWSAGVILYILLSGMPPFWGKTKSKIFDAV--RAADLRFPSDPWDHISASAR 274
Y+ + ADVWS GV LY++L G PF + K F R ++++ + HIS R
Sbjct: 192 EYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECR 251
Query: 275 DLIMGMLRVDPSTRLTAAEVLAHSWM 300
LI + DP+ R++ E+ H W
Sbjct: 252 HLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 167 bits (424), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 105/266 (39%), Positives = 142/266 (53%), Gaps = 10/266 (3%)
Query: 39 SDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLS 98
SDRY L K +G G FGV R DK E++A K I + + ++K EI I +
Sbjct: 18 SDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKID----ENVKREI-INHRSL 72
Query: 99 GHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCH 158
HPN+V K V ++ ++ME +GGELF R+ GRFSE EAR F+ L+ VSY H
Sbjct: 73 RHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAH 132
Query: 159 GNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEV-LAG 217
V HRDLK EN LL S + +K+ADFG + VG+P YIAPEV L
Sbjct: 133 AMQVAHRDLKLENTLL-DGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLKK 191
Query: 218 GYN-QAADVWSAGVILYILLSGMPPFWGKTKSKIFDAV--RAADLRFPSDPWDHISASAR 274
Y+ + ADVWS GV LY++L G PF + K F R ++++ + HIS R
Sbjct: 192 EYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECR 251
Query: 275 DLIMGMLRVDPSTRLTAAEVLAHSWM 300
LI + DP+ R++ E+ H W
Sbjct: 252 HLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/271 (33%), Positives = 147/271 (54%), Gaps = 8/271 (2%)
Query: 37 NLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTK 96
+ D ++ ++LG G FG + ++ +G K+I KDR + + I+ EIE++
Sbjct: 19 TIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDR--SQVPMEQIEAEIEVLKS 76
Query: 97 LSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRL---EKYGR-FSETEARVIFRHLMQ 152
L HPN++ + V+E+ ++++ME C GGEL R+ + G+ SE + + +M
Sbjct: 77 LD-HPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMN 135
Query: 153 VVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAP 212
++Y H VVH+DLKPENIL S SPIK+ DFGLA K+ ++ G+ Y+AP
Sbjct: 136 ALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAP 195
Query: 213 EVLAGGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISAS 272
EV D+WSAGV++Y LL+G PF G + ++ + + + ++
Sbjct: 196 EVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVE-CRPLTPQ 254
Query: 273 ARDLIMGMLRVDPSTRLTAAEVLAHSWMEEC 303
A DL+ ML DP R +AA+VL H W ++
Sbjct: 255 AVDLLKQMLTKDPERRPSAAQVLHHEWFKQA 285
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 164 bits (415), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 94/265 (35%), Positives = 147/265 (55%), Gaps = 11/265 (4%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D Y + ++LG G FGV+ +++ TG A K + E VR EI+ M+ L
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRK---EIQTMSVLR- 106
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRL-EKYGRFSETEARVIFRHLMQVVSYCH 158
HP +V+L +E+++ + ++ E +GGELF ++ +++ + SE EA R + + + + H
Sbjct: 107 HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH 166
Query: 159 GNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAG- 217
N VH DLKPENI+ TK S+ +KL DFGL ++ Q++ T G+ + APEV G
Sbjct: 167 ENNYVHLDLKPENIMFTTKRSNE-LKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGK 225
Query: 218 --GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARD 275
GY D+WS GV+ YILLSG+ PF G+ + V++ D + IS +D
Sbjct: 226 PVGY--YTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKD 283
Query: 276 LIMGMLRVDPSTRLTAAEVLAHSWM 300
I +L DP+TR+T + L H W+
Sbjct: 284 FIRKLLLADPNTRMTIHQALEHPWL 308
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 94/265 (35%), Positives = 147/265 (55%), Gaps = 11/265 (4%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D Y + ++LG G FGV+ +++ TG A K + E VR EI+ M+ L
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRK---EIQTMSVLR- 212
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRL-EKYGRFSETEARVIFRHLMQVVSYCH 158
HP +V+L +E+++ + ++ E +GGELF ++ +++ + SE EA R + + + + H
Sbjct: 213 HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH 272
Query: 159 GNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAG- 217
N VH DLKPENI+ TK S+ +KL DFGL ++ Q++ T G+ + APEV G
Sbjct: 273 ENNYVHLDLKPENIMFTTKRSNE-LKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGK 331
Query: 218 --GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARD 275
GY D+WS GV+ YILLSG+ PF G+ + V++ D + IS +D
Sbjct: 332 PVGY--YTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKD 389
Query: 276 LIMGMLRVDPSTRLTAAEVLAHSWM 300
I +L DP+TR+T + L H W+
Sbjct: 390 FIRKLLLADPNTRMTIHQALEHPWL 414
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/286 (36%), Positives = 150/286 (52%), Gaps = 34/286 (11%)
Query: 48 LGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRS-IKLEIEIMTKLSGHPNVVDL 106
LG G ++ C + T + A K I K +RS + E+E++ + GH NV++L
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQP----GHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 107 KAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHRD 166
+EEED +L+ E GG + + K F+E EA V+ + + + + H G+ HRD
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRD 136
Query: 167 LKPENILLATKSSSSPIKLADFGLATYIK--------AGQNLHGTVGSPFYIAPEVL--- 215
LKPENIL + SP+K+ DFGL + IK + L GS Y+APEV+
Sbjct: 137 LKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAF 196
Query: 216 ---AGGYNQAADVWSAGVILYILLSGMPPFWGKTKSK---------------IFDAVRAA 257
A Y++ D+WS GVILYILLSG PPF G+ S +F++++
Sbjct: 197 SEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEG 256
Query: 258 DLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEEC 303
FP W HIS +A+DLI +L D RL+AA+VL H W++ C
Sbjct: 257 KYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGC 302
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 98/261 (37%), Positives = 139/261 (53%), Gaps = 11/261 (4%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
Y L K +G G F ++ TG+ +A K I K +L + ++ + E+ IM K+ HP
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNS-SSLQKLFREVRIM-KVLNHP 73
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
N+V L V E E ++L+ME +GGE+F L +GR E EAR FR ++ V YCH
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAGGYNQ 221
+VHRDLK EN+LL + IK+ADFG + G L GSP Y APE+ G
Sbjct: 134 IVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYD 190
Query: 222 A--ADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMG 279
DVWS GVILY L+SG PF G+ ++ + V R P ++S +L+
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF----YMSTDCENLLKK 246
Query: 280 MLRVDPSTRLTAAEVLAHSWM 300
L ++PS R T +++ WM
Sbjct: 247 FLILNPSKRGTLEQIMKDRWM 267
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 98/261 (37%), Positives = 139/261 (53%), Gaps = 11/261 (4%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
Y L K +G G F ++ TG+ +A K I K +L + ++ + E+ IM K+ HP
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNS-SSLQKLFREVRIM-KVLNHP 73
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
N+V L V E E ++L+ME +GGE+F L +GR E EAR FR ++ V YCH
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAGGYNQ 221
+VHRDLK EN+LL + IK+ADFG + G L GSP Y APE+ G
Sbjct: 134 IVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYD 190
Query: 222 A--ADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMG 279
DVWS GVILY L+SG PF G+ ++ + V R P ++S +L+
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF----YMSTDCENLLKK 246
Query: 280 MLRVDPSTRLTAAEVLAHSWM 300
L ++PS R T +++ WM
Sbjct: 247 FLILNPSKRGTLEQIMKDRWM 267
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 92/284 (32%), Positives = 147/284 (51%), Gaps = 19/284 (6%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKL 97
+ D V + LG G G + + +K T E A K ++D + E+E+ +
Sbjct: 66 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALK--------MLQDCPKARREVELHWRA 117
Query: 98 SGHPNVVDLKAVYEE----EDYVHLLMELCAGGELFHRLEKYG--RFSETEARVIFRHLM 151
S P++V + VYE + ++ME GGELF R++ G F+E EA I + +
Sbjct: 118 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 177
Query: 152 QVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIA 211
+ + Y H + HRD+KPEN+L +K ++ +KL DFG A + +L +P+Y+A
Sbjct: 178 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 237
Query: 212 PEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDA----VRAADLRFPSDPW 266
PEVL Y+++ D+WS GVI+YILL G PPF+ I +R FP+ W
Sbjct: 238 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 297
Query: 267 DHISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKP 310
+S + LI +L+ +P+ R+T E + H W+ + +V Q P
Sbjct: 298 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTP 341
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 92/284 (32%), Positives = 147/284 (51%), Gaps = 19/284 (6%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKL 97
+ D V + LG G G + + +K T E A K ++D + E+E+ +
Sbjct: 22 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALK--------MLQDCPKARREVELHWRA 73
Query: 98 SGHPNVVDLKAVYEE----EDYVHLLMELCAGGELFHRLEKYG--RFSETEARVIFRHLM 151
S P++V + VYE + ++ME GGELF R++ G F+E EA I + +
Sbjct: 74 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 133
Query: 152 QVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIA 211
+ + Y H + HRD+KPEN+L +K ++ +KL DFG A + +L +P+Y+A
Sbjct: 134 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 193
Query: 212 PEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDA----VRAADLRFPSDPW 266
PEVL Y+++ D+WS GVI+YILL G PPF+ I +R FP+ W
Sbjct: 194 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 253
Query: 267 DHISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKP 310
+S + LI +L+ +P+ R+T E + H W+ + +V Q P
Sbjct: 254 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTP 297
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 92/284 (32%), Positives = 147/284 (51%), Gaps = 19/284 (6%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKL 97
+ D V + LG G G + + +K T E A K ++D + E+E+ +
Sbjct: 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALK--------MLQDCPKARREVELHWRA 111
Query: 98 SGHPNVVDLKAVYEE----EDYVHLLMELCAGGELFHRLEKYG--RFSETEARVIFRHLM 151
S P++V + VYE + ++ME GGELF R++ G F+E EA I + +
Sbjct: 112 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 171
Query: 152 QVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIA 211
+ + Y H + HRD+KPEN+L +K ++ +KL DFG A + +L +P+Y+A
Sbjct: 172 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 231
Query: 212 PEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDA----VRAADLRFPSDPW 266
PEVL Y+++ D+WS GVI+YILL G PPF+ I +R FP+ W
Sbjct: 232 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 291
Query: 267 DHISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKP 310
+S + LI +L+ +P+ R+T E + H W+ + +V Q P
Sbjct: 292 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTP 335
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 92/284 (32%), Positives = 147/284 (51%), Gaps = 19/284 (6%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKL 97
+ D V + LG G G + + +K T E A K + +D + E+E+ +
Sbjct: 14 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVELHWRA 65
Query: 98 SGHPNVVDLKAVYEE----EDYVHLLMELCAGGELFHRLEKYG--RFSETEARVIFRHLM 151
S P++V + VYE + ++ME GGELF R++ G F+E EA I + +
Sbjct: 66 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 125
Query: 152 QVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIA 211
+ + Y H + HRD+KPEN+L +K ++ +KL DFG A + +L +P+Y+A
Sbjct: 126 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 185
Query: 212 PEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDA----VRAADLRFPSDPW 266
PEVL Y+++ D+WS GVI+YILL G PPF+ I +R FP+ W
Sbjct: 186 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 245
Query: 267 DHISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKP 310
+S + LI +L+ +P+ R+T E + H W+ + +V Q P
Sbjct: 246 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTP 289
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 92/284 (32%), Positives = 147/284 (51%), Gaps = 19/284 (6%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKL 97
+ D V + LG G G + + +K T E A K ++D + E+E+ +
Sbjct: 15 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALK--------MLQDCPKARREVELHWRA 66
Query: 98 SGHPNVVDLKAVYEE----EDYVHLLMELCAGGELFHRLEKYG--RFSETEARVIFRHLM 151
S P++V + VYE + ++ME GGELF R++ G F+E EA I + +
Sbjct: 67 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 126
Query: 152 QVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIA 211
+ + Y H + HRD+KPEN+L +K ++ +KL DFG A + +L +P+Y+A
Sbjct: 127 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 186
Query: 212 PEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDA----VRAADLRFPSDPW 266
PEVL Y+++ D+WS GVI+YILL G PPF+ I +R FP+ W
Sbjct: 187 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 246
Query: 267 DHISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKP 310
+S + LI +L+ +P+ R+T E + H W+ + +V Q P
Sbjct: 247 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTP 290
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 92/284 (32%), Positives = 147/284 (51%), Gaps = 19/284 (6%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKL 97
+ D V + LG G G + + +K T E A K + +D + E+E+ +
Sbjct: 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVELHWRA 67
Query: 98 SGHPNVVDLKAVYEE----EDYVHLLMELCAGGELFHRLEKYG--RFSETEARVIFRHLM 151
S P++V + VYE + ++ME GGELF R++ G F+E EA I + +
Sbjct: 68 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 127
Query: 152 QVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIA 211
+ + Y H + HRD+KPEN+L +K ++ +KL DFG A + +L +P+Y+A
Sbjct: 128 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 187
Query: 212 PEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDA----VRAADLRFPSDPW 266
PEVL Y+++ D+WS GVI+YILL G PPF+ I +R FP+ W
Sbjct: 188 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 247
Query: 267 DHISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKP 310
+S + LI +L+ +P+ R+T E + H W+ + +V Q P
Sbjct: 248 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTP 291
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 92/284 (32%), Positives = 147/284 (51%), Gaps = 19/284 (6%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKL 97
+ D V + LG G G + + +K T E A K ++D + E+E+ +
Sbjct: 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALK--------MLQDCPKARREVELHWRA 67
Query: 98 SGHPNVVDLKAVYEE----EDYVHLLMELCAGGELFHRLEKYG--RFSETEARVIFRHLM 151
S P++V + VYE + ++ME GGELF R++ G F+E EA I + +
Sbjct: 68 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 127
Query: 152 QVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIA 211
+ + Y H + HRD+KPEN+L +K ++ +KL DFG A + +L +P+Y+A
Sbjct: 128 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 187
Query: 212 PEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDA----VRAADLRFPSDPW 266
PEVL Y+++ D+WS GVI+YILL G PPF+ I +R FP+ W
Sbjct: 188 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 247
Query: 267 DHISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKP 310
+S + LI +L+ +P+ R+T E + H W+ + +V Q P
Sbjct: 248 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTP 291
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 92/284 (32%), Positives = 147/284 (51%), Gaps = 19/284 (6%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKL 97
+ D V + LG G G + + +K T E A K + +D + E+E+ +
Sbjct: 20 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVELHWRA 71
Query: 98 SGHPNVVDLKAVYEE----EDYVHLLMELCAGGELFHRLEKYG--RFSETEARVIFRHLM 151
S P++V + VYE + ++ME GGELF R++ G F+E EA I + +
Sbjct: 72 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 131
Query: 152 QVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIA 211
+ + Y H + HRD+KPEN+L +K ++ +KL DFG A + +L +P+Y+A
Sbjct: 132 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 191
Query: 212 PEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDA----VRAADLRFPSDPW 266
PEVL Y+++ D+WS GVI+YILL G PPF+ I +R FP+ W
Sbjct: 192 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 251
Query: 267 DHISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKP 310
+S + LI +L+ +P+ R+T E + H W+ + +V Q P
Sbjct: 252 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTP 295
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 92/284 (32%), Positives = 147/284 (51%), Gaps = 19/284 (6%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKL 97
+ D V + LG G G + + +K T E A K ++D + E+E+ +
Sbjct: 30 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALK--------MLQDCPKARREVELHWRA 81
Query: 98 SGHPNVVDLKAVYEE----EDYVHLLMELCAGGELFHRLEKYG--RFSETEARVIFRHLM 151
S P++V + VYE + ++ME GGELF R++ G F+E EA I + +
Sbjct: 82 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 141
Query: 152 QVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIA 211
+ + Y H + HRD+KPEN+L +K ++ +KL DFG A + +L +P+Y+A
Sbjct: 142 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 201
Query: 212 PEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDA----VRAADLRFPSDPW 266
PEVL Y+++ D+WS GVI+YILL G PPF+ I +R FP+ W
Sbjct: 202 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 261
Query: 267 DHISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKP 310
+S + LI +L+ +P+ R+T E + H W+ + +V Q P
Sbjct: 262 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTP 305
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 162 bits (409), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 92/284 (32%), Positives = 147/284 (51%), Gaps = 19/284 (6%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKL 97
+ D V + LG G G + + +K T E A K + +D + E+E+ +
Sbjct: 21 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML--------QDCPKARREVELHWRA 72
Query: 98 SGHPNVVDLKAVYEE----EDYVHLLMELCAGGELFHRLEKYG--RFSETEARVIFRHLM 151
S P++V + VYE + ++ME GGELF R++ G F+E EA I + +
Sbjct: 73 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 132
Query: 152 QVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIA 211
+ + Y H + HRD+KPEN+L +K ++ +KL DFG A + +L +P+Y+A
Sbjct: 133 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 192
Query: 212 PEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDA----VRAADLRFPSDPW 266
PEVL Y+++ D+WS GVI+YILL G PPF+ I +R FP+ W
Sbjct: 193 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 252
Query: 267 DHISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKP 310
+S + LI +L+ +P+ R+T E + H W+ + +V Q P
Sbjct: 253 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTP 296
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 162 bits (409), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 92/284 (32%), Positives = 147/284 (51%), Gaps = 19/284 (6%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKL 97
+ D V + LG G G + + +K T E A K ++D + E+E+ +
Sbjct: 14 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALK--------MLQDCPKARREVELHWRA 65
Query: 98 SGHPNVVDLKAVYEE----EDYVHLLMELCAGGELFHRLEKYG--RFSETEARVIFRHLM 151
S P++V + VYE + ++ME GGELF R++ G F+E EA I + +
Sbjct: 66 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 125
Query: 152 QVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIA 211
+ + Y H + HRD+KPEN+L +K ++ +KL DFG A + +L +P+Y+A
Sbjct: 126 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVA 185
Query: 212 PEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDA----VRAADLRFPSDPW 266
PEVL Y+++ D+WS GVI+YILL G PPF+ I +R FP+ W
Sbjct: 186 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 245
Query: 267 DHISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKP 310
+S + LI +L+ +P+ R+T E + H W+ + +V Q P
Sbjct: 246 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTP 289
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 162 bits (409), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 97/261 (37%), Positives = 139/261 (53%), Gaps = 11/261 (4%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
Y L K +G G F ++ TG+ +A K I K +L + ++ + E+ IM K+ HP
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNS-SSLQKLFREVRIM-KVLNHP 73
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
N+V L V E E ++L+ME +GGE+F L +GR E EAR FR ++ V YCH
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAGGYNQ 221
+VHRDLK EN+LL + IK+ADFG + G L G+P Y APE+ G
Sbjct: 134 IVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYD 190
Query: 222 A--ADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMG 279
DVWS GVILY L+SG PF G+ ++ + V R P ++S +L+
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF----YMSTDCENLLKK 246
Query: 280 MLRVDPSTRLTAAEVLAHSWM 300
L ++PS R T +++ WM
Sbjct: 247 FLILNPSKRGTLEQIMKDRWM 267
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 161 bits (408), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 97/261 (37%), Positives = 139/261 (53%), Gaps = 11/261 (4%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
Y L K +G G F ++ TG+ +A + I K +L + ++ + E+ IM K+ HP
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNS-SSLQKLFREVRIM-KVLNHP 73
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
N+V L V E E ++L+ME +GGE+F L +GR E EAR FR ++ V YCH
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAGGYNQ 221
+VHRDLK EN+LL + IK+ADFG + G L GSP Y APE+ G
Sbjct: 134 IVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYD 190
Query: 222 A--ADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMG 279
DVWS GVILY L+SG PF G+ ++ + V R P ++S +L+
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF----YMSTDCENLLKK 246
Query: 280 MLRVDPSTRLTAAEVLAHSWM 300
L ++PS R T +++ WM
Sbjct: 247 FLILNPSKRGTLEQIMKDRWM 267
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 161 bits (408), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 104/267 (38%), Positives = 141/267 (52%), Gaps = 12/267 (4%)
Query: 39 SDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLS 98
SDRY K +G G FGV R DK T E++A K I + + R I I +
Sbjct: 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREI-----INHRSL 73
Query: 99 GHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCH 158
HPN+V K V ++ ++ME +GGEL+ R+ GRFSE EAR F+ L+ VSYCH
Sbjct: 74 RHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCH 133
Query: 159 GNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEV-LAG 217
+ HRDLK EN LL S + +K+ DFG + TVG+P YIAPEV L
Sbjct: 134 SMQICHRDLKLENTLL-DGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQ 192
Query: 218 GYN-QAADVWSAGVILYILLSGMPPFWGKTKSKIFDAV--RAADLRFPSDPWD-HISASA 273
Y+ + ADVWS GV LY++L G PF + + + R +++ S P D IS
Sbjct: 193 EYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKY-SIPDDIRISPEC 251
Query: 274 RDLIMGMLRVDPSTRLTAAEVLAHSWM 300
LI + DP+TR++ E+ HSW
Sbjct: 252 CHLISRIFVADPATRISIPEIKTHSWF 278
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 161 bits (407), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 97/261 (37%), Positives = 139/261 (53%), Gaps = 11/261 (4%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
Y L K +G G F ++ TG+ +A + I K +L + ++ + E+ IM K+ HP
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNS-SSLQKLFREVRIM-KVLNHP 73
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
N+V L V E E ++L+ME +GGE+F L +GR E EAR FR ++ V YCH
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAGGYNQ 221
+VHRDLK EN+LL + IK+ADFG + G L GSP Y APE+ G
Sbjct: 134 IVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYD 190
Query: 222 A--ADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMG 279
DVWS GVILY L+SG PF G+ ++ + V R P ++S +L+
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF----YMSTDCENLLKK 246
Query: 280 MLRVDPSTRLTAAEVLAHSWM 300
L ++PS R T +++ WM
Sbjct: 247 FLILNPSKRGTLEQIMKDRWM 267
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/286 (35%), Positives = 149/286 (52%), Gaps = 34/286 (11%)
Query: 48 LGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRS-IKLEIEIMTKLSGHPNVVDL 106
LG G ++ C + T + A K I K +RS + E+E++ + GH NV++L
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQP----GHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 107 KAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHRD 166
+EEED +L+ E GG + + K F+E EA V+ + + + + H G+ HRD
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRD 136
Query: 167 LKPENILLATKSSSSPIKLADFGLATYIK--------AGQNLHGTVGSPFYIAPEVL--- 215
LKPENIL + SP+K+ DF L + IK + L GS Y+APEV+
Sbjct: 137 LKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAF 196
Query: 216 ---AGGYNQAADVWSAGVILYILLSGMPPFWGKTKSK---------------IFDAVRAA 257
A Y++ D+WS GVILYILLSG PPF G+ S +F++++
Sbjct: 197 SEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEG 256
Query: 258 DLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEEC 303
FP W HIS +A+DLI +L D RL+AA+VL H W++ C
Sbjct: 257 KYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGC 302
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 91/273 (33%), Positives = 149/273 (54%), Gaps = 7/273 (2%)
Query: 35 ISNLSDRYVL-GKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRS-IKLEIE 92
+ N ++ Y+L K+LG G+F V+R+C K TG+ A K + K R +D R+ I EI
Sbjct: 23 MENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRR--RGQDCRAEILHEIA 80
Query: 93 IMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRL--EKYGRFSETEARVIFRHL 150
++ P V++L VYE + L++E AGGE+F E SE + + + +
Sbjct: 81 VLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQI 140
Query: 151 MQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYI 210
++ V Y H N +VH DLKP+NILL++ IK+ DFG++ I L +G+P Y+
Sbjct: 141 LEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYL 200
Query: 211 APEVLA-GGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHI 269
APE+L A D+W+ G+I Y+LL+ PF G+ + + + ++ + + + +
Sbjct: 201 APEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSV 260
Query: 270 SASARDLIMGMLRVDPSTRLTAAEVLAHSWMEE 302
S A D I +L +P R TA L+HSW+++
Sbjct: 261 SQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQ 293
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 158 bits (400), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 94/268 (35%), Positives = 149/268 (55%), Gaps = 15/268 (5%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D Y + ++LG G FGV+ C +K TG V K I + D ++K EI IM +L
Sbjct: 51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPL---DKYTVKNEISIMNQLH- 106
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRL--EKYGRFSETEARVIFRHLMQVVSYC 157
HP +++L +E++ + L++E +GGELF R+ E Y + SE E R + + +
Sbjct: 107 HPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDY-KMSEAEVINYMRQACEGLKHM 165
Query: 158 HGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVL-- 215
H + +VH D+KPENI+ TK +SS +K+ DFGLAT + + + T + + APE++
Sbjct: 166 HEHSIVHLDIKPENIMCETKKASS-VKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDR 224
Query: 216 --AGGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASA 273
G Y D+W+ GV+ Y+LLSG+ PF G+ + V+ D F D + +S A
Sbjct: 225 EPVGFY---TDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEA 281
Query: 274 RDLIMGMLRVDPSTRLTAAEVLAHSWME 301
+D I +L+ +P RLT + L H W++
Sbjct: 282 KDFIKNLLQKEPRKRLTVHDALEHPWLK 309
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 158 bits (400), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 97/261 (37%), Positives = 138/261 (52%), Gaps = 11/261 (4%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
Y L K +G G F ++ TG+ +A K I K +L + ++ + E+ IM K+ HP
Sbjct: 9 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNS-SSLQKLFREVRIM-KVLNHP 66
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
N+V L V E E ++L+ME +GGE+F L +G E EAR FR ++ V YCH
Sbjct: 67 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKF 126
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAGGYNQ 221
+VHRDLK EN+LL + IK+ADFG + G L GSP Y APE+ G
Sbjct: 127 IVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYD 183
Query: 222 A--ADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMG 279
DVWS GVILY L+SG PF G+ ++ + V R P ++S +L+
Sbjct: 184 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF----YMSTDCENLLKK 239
Query: 280 MLRVDPSTRLTAAEVLAHSWM 300
L ++PS R T +++ WM
Sbjct: 240 FLILNPSKRGTLEQIMKDRWM 260
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 157 bits (398), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 136/261 (52%), Gaps = 11/261 (4%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
Y L K +G G F ++ TG +A K I K +L ++ + E+ IM K+ HP
Sbjct: 14 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL-NPTSLQKLFREVRIM-KILNHP 71
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
N+V L V E E ++L+ME +GGE+F L +GR E EAR FR ++ V YCH
Sbjct: 72 NIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKR 131
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAGGYNQ 221
+VHRDLK EN+LL + IK+ADFG + G L GSP Y APE+ G
Sbjct: 132 IVHRDLKAENLLL---DADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYD 188
Query: 222 A--ADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMG 279
DVWS GVILY L+SG PF G+ ++ + V R P ++S +L+
Sbjct: 189 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF----YMSTDCENLLKR 244
Query: 280 MLRVDPSTRLTAAEVLAHSWM 300
L ++P R T +++ W+
Sbjct: 245 FLVLNPIKRGTLEQIMKDRWI 265
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 157 bits (398), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 97/281 (34%), Positives = 149/281 (53%), Gaps = 11/281 (3%)
Query: 32 ATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEI 91
AT I + + +G LG G F + TG +A K I K + V+ ++ E+
Sbjct: 3 ATCIGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEV 62
Query: 92 EIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLE-KYGRFSETEARVIFRHL 150
+I +L HP++++L +E+ +YV+L++E+C GE+ L+ + FSE EAR +
Sbjct: 63 KIHCQLK-HPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQI 121
Query: 151 MQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTV-GSPFY 209
+ + Y H +G++HRDL N+LL + IK+ADFGLAT +K H T+ G+P Y
Sbjct: 122 ITGMLYLHSHGILHRDLTLSNLLLTRNMN---IKIADFGLATQLKMPHEKHYTLCGTPNY 178
Query: 210 IAPEVLA-GGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDH 268
I+PE+ + +DVWS G + Y LL G PPF T + V AD PS
Sbjct: 179 ISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPS----F 234
Query: 269 ISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQK 309
+S A+DLI +LR +P+ RL+ + VL H +M K
Sbjct: 235 LSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRNSSTKSK 275
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 157 bits (397), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 95/261 (36%), Positives = 136/261 (52%), Gaps = 11/261 (4%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
Y L K +G G F ++ TG +A K I K +L ++ + E+ IM K+ HP
Sbjct: 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL-NPTSLQKLFREVRIM-KILNHP 74
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
N+V L V E E ++L+ME +GGE+F L +GR E EAR FR ++ V YCH
Sbjct: 75 NIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKR 134
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAGGYNQ 221
+VHRDLK EN+LL + IK+ADFG + G L G+P Y APE+ G
Sbjct: 135 IVHRDLKAENLLL---DADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYD 191
Query: 222 A--ADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMG 279
DVWS GVILY L+SG PF G+ ++ + V R P ++S +L+
Sbjct: 192 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF----YMSTDCENLLKR 247
Query: 280 MLRVDPSTRLTAAEVLAHSWM 300
L ++P R T +++ W+
Sbjct: 248 FLVLNPIKRGTLEQIMKDRWI 268
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/284 (32%), Positives = 142/284 (50%), Gaps = 19/284 (6%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKL 97
+ D V + LG G G + + +K T E A K + +D + E+E+ +
Sbjct: 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKXL--------QDCPKARREVELHWRA 111
Query: 98 SGHPNVVDLKAVYEE----EDYVHLLMELCAGGELFHRLEKYG--RFSETEARVIFRHLM 151
S P++V + VYE + ++ E GGELF R++ G F+E EA I + +
Sbjct: 112 SQCPHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIG 171
Query: 152 QVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIA 211
+ + Y H + HRD+KPEN+L +K ++ +KL DFG A + +L +P+Y+A
Sbjct: 172 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 231
Query: 212 PEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDA----VRAADLRFPSDPW 266
PEVL Y+++ D WS GVI YILL G PPF+ I +R FP+ W
Sbjct: 232 PEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPNPEW 291
Query: 267 DHISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKP 310
+S + LI +L+ +P+ R T E H W+ + +V Q P
Sbjct: 292 SEVSEEVKXLIRNLLKTEPTQRXTITEFXNHPWIXQSTKVPQTP 335
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/241 (34%), Positives = 130/241 (53%), Gaps = 29/241 (12%)
Query: 90 EIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRH 149
E+E + + G+ N+++L +E++ +L+ E GG + ++K F+E EA + R
Sbjct: 60 EVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRD 119
Query: 150 LMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN--------LH 201
+ + + H G+ HRDLKPENIL + SP+K+ DF L + +K + L
Sbjct: 120 VAAALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELT 179
Query: 202 GTVGSPFYIAPEVL------AGGYNQAADVWSAGVILYILLSGMPPFWGK---------- 245
GS Y+APEV+ A Y++ D+WS GV+LYI+LSG PPF G
Sbjct: 180 TPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRG 239
Query: 246 -----TKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAHSWM 300
++K+F++++ FP W HIS+ A+DLI +L D RL+AA+VL H W+
Sbjct: 240 EVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWV 299
Query: 301 E 301
+
Sbjct: 300 Q 300
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/261 (33%), Positives = 143/261 (54%), Gaps = 14/261 (5%)
Query: 44 LGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNV 103
+G+ LG G+FG + ++ + +LA K + K +L ++ E+EI + L HPN+
Sbjct: 16 IGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR-HPNI 74
Query: 104 VDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVV 163
+ L + + V+L++E G ++ L+K RF E L +SYCH V+
Sbjct: 75 LRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVI 134
Query: 164 HRDLKPENILLATKSSSSPIKLADFGLATYIKAGQ--NLHGTVGSPFYIAPEVLAGG-YN 220
HRD+KPEN+LL S+ +K+ADFG + + + + L GT+ Y+ PE++ G ++
Sbjct: 135 HRDIKPENLLLG---SNGELKIADFGWSVHAPSSRRTTLCGTLD---YLPPEMIEGRMHD 188
Query: 221 QAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGM 280
+ D+WS GV+ Y L GMPPF T + + + + FP D ++ ARDLI +
Sbjct: 189 EKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFP----DFVTEGARDLISRL 244
Query: 281 LRVDPSTRLTAAEVLAHSWME 301
L+ + S RLT AEVL H W++
Sbjct: 245 LKHNASQRLTLAEVLEHPWIK 265
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/261 (33%), Positives = 143/261 (54%), Gaps = 14/261 (5%)
Query: 44 LGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNV 103
+G+ LG G+FG + ++ + +LA K + K +L ++ E+EI + L HPN+
Sbjct: 16 IGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR-HPNI 74
Query: 104 VDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVV 163
+ L + + V+L++E G ++ L+K RF E L +SYCH V+
Sbjct: 75 LRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVI 134
Query: 164 HRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN--LHGTVGSPFYIAPEVLAGG-YN 220
HRD+KPEN+LL S+ +K+ADFG + + + + L GT+ Y+ PE++ G ++
Sbjct: 135 HRDIKPENLLLG---SNGELKIADFGWSVHAPSSRRDTLCGTLD---YLPPEMIEGRMHD 188
Query: 221 QAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGM 280
+ D+WS GV+ Y L GMPPF T + + + + FP D ++ ARDLI +
Sbjct: 189 EKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFP----DFVTEGARDLISRL 244
Query: 281 LRVDPSTRLTAAEVLAHSWME 301
L+ + S RLT AEVL H W++
Sbjct: 245 LKHNASQRLTLAEVLEHPWIK 265
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 88/278 (31%), Positives = 147/278 (52%), Gaps = 16/278 (5%)
Query: 40 DRYVLGKQLGWGQFGVI---RECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTK 96
D + +G+ LG G+FG + RE +KF ++A K + K +L ++ EIEI +
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKF---IMALKVLFKSQLEKEGVEHQLRREIEIQSH 71
Query: 97 LSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSY 156
L HPN++ + + + ++L++E GEL+ L+K+GRF E + L + Y
Sbjct: 72 LR-HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHY 130
Query: 157 CHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLA 216
CH V+HRD+KPEN+L+ K +K+ADFG + + + + G+ Y+ PE++
Sbjct: 131 CHERKVIHRDIKPENLLMGYKGE---LKIADFGWSVHAPSLRR-RXMCGTLDYLPPEMIE 186
Query: 217 GG-YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARD 275
G +++ D+W AGV+ Y L GMPPF + ++ + DL+FP +S ++D
Sbjct: 187 GKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPP----FLSDGSKD 242
Query: 276 LIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKPCKQ 313
LI +LR P RL V+ H W++ + P Q
Sbjct: 243 LISKLLRYHPPQRLPLKGVMEHPWVKANSRRVLPPVYQ 280
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 91/284 (32%), Positives = 149/284 (52%), Gaps = 19/284 (6%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ +G+ LG G+FG + +K + +LA K + K +L ++ E+EI + L HP
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 73
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
N++ L + + V+L++E GE++ L+K +F E L +SYCH
Sbjct: 74 NILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKR 133
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN--LHGTVGSPFYIAPEVLAGG- 218
V+HRD+KPEN+LL S+ +K+ADFG + + + + L GT+ Y+ PE++ G
Sbjct: 134 VIHRDIKPENLLLG---SAGELKIADFGWSVHAPSSRRXXLXGTLD---YLPPEMIEGRM 187
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
+++ D+WS GV+ Y L G PPF T + + + + FP D ++ ARDLI
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 243
Query: 279 GMLRVDPSTRLTAAEVLAHSWMEECEQVAQKP--CKQDDLCCKQ 320
+L+ +PS R EVL H W+ + KP C+ + KQ
Sbjct: 244 RLLKHNPSQRPMLREVLEHPWITAN---SSKPSNCQNKESASKQ 284
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 88/278 (31%), Positives = 147/278 (52%), Gaps = 16/278 (5%)
Query: 40 DRYVLGKQLGWGQFGVI---RECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTK 96
D + +G+ LG G+FG + RE +KF ++A K + K +L ++ EIEI +
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKF---IMALKVLFKSQLEKEGVEHQLRREIEIQSH 70
Query: 97 LSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSY 156
L HPN++ + + + ++L++E GEL+ L+K+GRF E + L + Y
Sbjct: 71 LR-HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHY 129
Query: 157 CHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLA 216
CH V+HRD+KPEN+L+ K +K+ADFG + + + + G+ Y+ PE++
Sbjct: 130 CHERKVIHRDIKPENLLMGYKGE---LKIADFGWSVHAPSLRR-RXMCGTLDYLPPEMIE 185
Query: 217 GG-YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARD 275
G +++ D+W AGV+ Y L GMPPF + ++ + DL+FP +S ++D
Sbjct: 186 GKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPP----FLSDGSKD 241
Query: 276 LIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKPCKQ 313
LI +LR P RL V+ H W++ + P Q
Sbjct: 242 LISKLLRYHPPQRLPLKGVMEHPWVKANSRRVLPPVYQ 279
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 154 bits (390), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 86/262 (32%), Positives = 141/262 (53%), Gaps = 14/262 (5%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ +G+ LG G+FG + +K + +LA K + K +L ++ E+EI + L HP
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 73
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
N++ L + + V+L++E GE++ L+K +F E L +SYCH
Sbjct: 74 NILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKR 133
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN--LHGTVGSPFYIAPEVLAGG- 218
V+HRD+KPEN+LL S+ +K+ADFG + + + + L GT+ Y+ PE++ G
Sbjct: 134 VIHRDIKPENLLLG---SAGELKIADFGWSVHAPSSRRTTLCGTLD---YLPPEMIEGRM 187
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
+++ D+WS GV+ Y L G PPF T + + + + FP D ++ ARDLI
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 243
Query: 279 GMLRVDPSTRLTAAEVLAHSWM 300
+L+ +PS R EVL H W+
Sbjct: 244 RLLKHNPSQRPMLREVLEHPWI 265
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 104/296 (35%), Positives = 149/296 (50%), Gaps = 16/296 (5%)
Query: 23 SSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVE 82
+S+T + I N Y L K +G G F ++ TG +A K I K +L
Sbjct: 2 NSITSATDEQPHIGN----YRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQL-NPT 56
Query: 83 DVRSIKLEIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETE 142
++ + E+ IM K+ HPN+V L V E E ++L+ME +GGE+F L +GR E E
Sbjct: 57 SLQKLFREVRIM-KILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE 115
Query: 143 ARVIFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHG 202
AR FR ++ V YCH +VHRDLK EN+LL IK+ADFG + G L
Sbjct: 116 ARAKFRQIVSAVQYCHQKYIVHRDLKAENLLL---DGDMNIKIADFGFSNEFTVGNKLDT 172
Query: 203 TVGSPFYIAPEVLAGGYNQA--ADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLR 260
GSP Y APE+ G DVWS GVILY L+SG PF G+ ++ + V R
Sbjct: 173 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR 232
Query: 261 FPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEEC-EQVAQKPCKQDD 315
P ++S +L+ +L ++P R + +++ WM E+ KP + D
Sbjct: 233 IPF----YMSTDCENLLKKLLVLNPIKRGSLEQIMKDRWMNVGHEEEELKPYTEPD 284
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 141/262 (53%), Gaps = 14/262 (5%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ +G+ LG G+FG + +K + +LA K + K +L ++ E+EI + L HP
Sbjct: 36 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 94
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
N++ L + + V+L++E G ++ L+K +F E L +SYCH
Sbjct: 95 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 154
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQ--NLHGTVGSPFYIAPEVLAGG- 218
V+HRD+KPEN+LL S+ +K+ADFG + + + + +L GT+ Y+ PE++ G
Sbjct: 155 VIHRDIKPENLLLG---SAGELKIADFGWSVHAPSSRRDDLCGTLD---YLPPEMIEGRM 208
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
+++ D+WS GV+ Y L G PPF T + + + + FP D ++ ARDLI
Sbjct: 209 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 264
Query: 279 GMLRVDPSTRLTAAEVLAHSWM 300
+L+ +PS R EVL H W+
Sbjct: 265 RLLKHNPSQRPMLREVLEHPWI 286
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 146/315 (46%), Gaps = 52/315 (16%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRL--VTVEDVRSIKLEIEIMT 95
L +Y L +G G +GV+R + T + A K + K+++ + +DV IK E+ +M
Sbjct: 24 LQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMK 83
Query: 96 KLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKY-----GR------------- 137
KL HPN+ L VYE+E Y+ L+MELC GG L +L + G+
Sbjct: 84 KLH-HPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPC 142
Query: 138 --------------------FSETEARV--IFRHLMQVVSYCHGNGVVHRDLKPENILLA 175
F + E + I R + + Y H G+ HRD+KPEN L +
Sbjct: 143 PECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFS 202
Query: 176 TKSSSSPIKLADFGLATYIKAGQN-----LHGTVGSPFYIAPEVLAG---GYNQAADVWS 227
T S IKL DFGL+ N + G+P+++APEVL Y D WS
Sbjct: 203 TNKSFE-IKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWS 261
Query: 228 AGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVDPST 287
AGV+L++LL G PF G + V L F + ++ +S ARDL+ +L +
Sbjct: 262 AGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDE 321
Query: 288 RLTAAEVLAHSWMEE 302
R A L H W+ +
Sbjct: 322 RFDAMRALQHPWISQ 336
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 140/262 (53%), Gaps = 14/262 (5%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ +G+ LG G+FG + +K + +LA K + K +L ++ E+EI + L HP
Sbjct: 36 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 94
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
N++ L + + V+L++E G ++ L+K +F E L +SYCH
Sbjct: 95 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 154
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN--LHGTVGSPFYIAPEVLAGG- 218
V+HRD+KPEN+LL S+ +K+ADFG + + + + L GT+ Y+ PE++ G
Sbjct: 155 VIHRDIKPENLLLG---SAGELKIADFGWSVHAPSSRRTTLCGTLD---YLPPEMIEGRM 208
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
+++ D+WS GV+ Y L G PPF T + + + + FP D ++ ARDLI
Sbjct: 209 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 264
Query: 279 GMLRVDPSTRLTAAEVLAHSWM 300
+L+ +PS R EVL H W+
Sbjct: 265 RLLKHNPSQRPMLREVLEHPWI 286
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 140/262 (53%), Gaps = 14/262 (5%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ +G+ LG G+FG + +K + +LA K + K +L ++ E+EI + L HP
Sbjct: 27 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 85
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
N++ L + + V+L++E G ++ L+K +F E L +SYCH
Sbjct: 86 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 145
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN--LHGTVGSPFYIAPEVLAGG- 218
V+HRD+KPEN+LL S+ +K+ADFG + + + + L GT+ Y+ PE++ G
Sbjct: 146 VIHRDIKPENLLLG---SAGELKIADFGWSVHAPSSRRTTLCGTLD---YLPPEMIEGRM 199
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
+++ D+WS GV+ Y L G PPF T + + + + FP D ++ ARDLI
Sbjct: 200 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 255
Query: 279 GMLRVDPSTRLTAAEVLAHSWM 300
+L+ +PS R EVL H W+
Sbjct: 256 RLLKHNPSQRPMLREVLEHPWI 277
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 140/262 (53%), Gaps = 14/262 (5%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ +G+ LG G+FG + +K + +LA K + K +L ++ E+EI + L HP
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 69
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
N++ L + + V+L++E G ++ L+K +F E L +SYCH
Sbjct: 70 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 129
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN--LHGTVGSPFYIAPEVLAGG- 218
V+HRD+KPEN+LL S+ +K+ADFG + + + + L GT+ Y+ PE++ G
Sbjct: 130 VIHRDIKPENLLLG---SAGELKIADFGWSCHAPSSRRTTLSGTLD---YLPPEMIEGRM 183
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
+++ D+WS GV+ Y L G PPF T + + + + FP D ++ ARDLI
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 239
Query: 279 GMLRVDPSTRLTAAEVLAHSWM 300
+L+ +PS R EVL H W+
Sbjct: 240 RLLKHNPSQRPMLREVLEHPWI 261
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 152 bits (383), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 94/260 (36%), Positives = 134/260 (51%), Gaps = 11/260 (4%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
Y L K +G G F ++ TG+ +A K I K +L + ++ + E+ I K+ HP
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNS-SSLQKLFREVRI-XKVLNHP 73
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
N+V L V E E ++L+ E +GGE+F L +GR E EAR FR ++ V YCH
Sbjct: 74 NIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKF 133
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAGGYNQ 221
+VHRDLK EN+LL + IK+ADFG + G L G+P Y APE+ G
Sbjct: 134 IVHRDLKAENLLL---DADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYD 190
Query: 222 A--ADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMG 279
DVWS GVILY L+SG PF G+ ++ + V R P + S +L+
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF----YXSTDCENLLKK 246
Query: 280 MLRVDPSTRLTAAEVLAHSW 299
L ++PS R T ++ W
Sbjct: 247 FLILNPSKRGTLEQIXKDRW 266
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 143/275 (52%), Gaps = 10/275 (3%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D + + + LG G+FG + +K ++A K + K +L ++ EIEI + L
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR- 72
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
HPN++ + + + ++L++E GEL+ L+K+GRF E + L + YCH
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHE 132
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAGG- 218
V+HRD+KPEN+L+ K +K+ADFG + + + + G+ Y+ PE++ G
Sbjct: 133 RKVIHRDIKPENLLMGYKGE---LKIADFGWSVHAPSLRR-RXMCGTLDYLPPEMIEGKT 188
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
+++ D+W AGV+ Y L GMPPF + ++ + DL+FP +S ++DLI
Sbjct: 189 HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPP----FLSDGSKDLIS 244
Query: 279 GMLRVDPSTRLTAAEVLAHSWMEECEQVAQKPCKQ 313
+LR P RL V+ H W++ + P Q
Sbjct: 245 KLLRYHPPQRLPLKGVMEHPWVKANSRRVLPPVYQ 279
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 141/262 (53%), Gaps = 14/262 (5%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ +G+ LG G+FG + +K + +LA K + K +L ++ E+EI + L HP
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 69
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
N++ L + + V+L++E G ++ L+K +F E L +SYCH
Sbjct: 70 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 129
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQ--NLHGTVGSPFYIAPEVLAGG- 218
V+HRD+KPEN+LL S+ +K+ADFG + + + + +L GT+ Y+ PE++ G
Sbjct: 130 VIHRDIKPENLLLG---SAGELKIADFGWSVHAPSSRRTDLCGTLD---YLPPEMIEGRM 183
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
+++ D+WS GV+ Y L G PPF T + + + + FP D ++ ARDLI
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 239
Query: 279 GMLRVDPSTRLTAAEVLAHSWM 300
+L+ +PS R EVL H W+
Sbjct: 240 RLLKHNPSQRPMLREVLEHPWI 261
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 140/262 (53%), Gaps = 14/262 (5%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ +G+ LG G+FG + +K + +LA K + K +L ++ E+EI + L HP
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 71
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
N++ L + + V+L++E G ++ L+K +F E L +SYCH
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 131
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN--LHGTVGSPFYIAPEVLAGG- 218
V+HRD+KPEN+LL S+ +K+ADFG + + + + L GT+ Y+ PE++ G
Sbjct: 132 VIHRDIKPENLLLG---SAGELKIADFGWSVHAPSSRRTTLCGTLD---YLPPEMIEGRM 185
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
+++ D+WS GV+ Y L G PPF T + + + + FP D ++ ARDLI
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 241
Query: 279 GMLRVDPSTRLTAAEVLAHSWM 300
+L+ +PS R EVL H W+
Sbjct: 242 RLLKHNPSQRPMLREVLEHPWI 263
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 151 bits (382), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 141/262 (53%), Gaps = 14/262 (5%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ +G+ LG G+FG + +K + +LA K + K +L ++ E+EI + L HP
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 73
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
N++ L + + V+L++E G ++ L+K +F E L +SYCH
Sbjct: 74 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 133
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQ--NLHGTVGSPFYIAPEVLAGG- 218
V+HRD+KPEN+LL S+ +K+ADFG + + + + +L GT+ Y+ PE++ G
Sbjct: 134 VIHRDIKPENLLLG---SAGELKIADFGWSVHAPSSRRTDLCGTLD---YLPPEMIEGRM 187
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
+++ D+WS GV+ Y L G PPF T + + + + FP D ++ ARDLI
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 243
Query: 279 GMLRVDPSTRLTAAEVLAHSWM 300
+L+ +PS R EVL H W+
Sbjct: 244 RLLKHNPSQRPMLREVLEHPWI 265
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 151 bits (382), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 148/284 (52%), Gaps = 19/284 (6%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ +G+ LG G+FG + +K + +LA K + K +L ++ E+EI + L HP
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 73
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
N++ L + + V+L++E G ++ L+K +F E L +SYCH
Sbjct: 74 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 133
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN--LHGTVGSPFYIAPEVLAGG- 218
V+HRD+KPEN+LL S+ +K+ADFG + + + + L GT+ Y+ PE++ G
Sbjct: 134 VIHRDIKPENLLLG---SAGELKIADFGWSVHAPSSRRTTLCGTLD---YLPPEMIEGRM 187
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
+++ D+WS GV+ Y L G PPF T + + + + FP D ++ ARDLI
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 243
Query: 279 GMLRVDPSTRLTAAEVLAHSWMEECEQVAQKP--CKQDDLCCKQ 320
+L+ +PS R EVL H W+ + KP C+ + KQ
Sbjct: 244 RLLKHNPSQRPMLREVLEHPWITAN---SSKPSNCQNKESASKQ 284
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 148/284 (52%), Gaps = 19/284 (6%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ +G+ LG G+FG + +K + +LA K + K +L ++ E+EI + L HP
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 68
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
N++ L + + V+L++E G ++ L+K +F E L +SYCH
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQ--NLHGTVGSPFYIAPEVLAGG- 218
V+HRD+KPEN+LL S+ +K+ADFG + + + + L GT+ Y+ PE++ G
Sbjct: 129 VIHRDIKPENLLLG---SAGELKIADFGWSVHAPSSRRTTLCGTLD---YLPPEMIEGRM 182
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
+++ D+WS GV+ Y L G PPF T + + + + FP D ++ ARDLI
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 238
Query: 279 GMLRVDPSTRLTAAEVLAHSWMEECEQVAQKP--CKQDDLCCKQ 320
+L+ +PS R EVL H W+ + KP C+ + KQ
Sbjct: 239 RLLKHNPSQRPMLREVLEHPWITAN---SSKPSNCQNKESASKQ 279
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 141/262 (53%), Gaps = 14/262 (5%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ +G+ LG G+FG + +K + +LA K + K +L ++ E+EI + L HP
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 68
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
N++ L + + V+L++E G ++ L+K +F E L +SYCH
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQ--NLHGTVGSPFYIAPEVLAGG- 218
V+HRD+KPEN+LL S+ +K+ADFG + + + + +L GT+ Y+ PE++ G
Sbjct: 129 VIHRDIKPENLLLG---SAGELKIADFGWSVHAPSSRRTDLCGTLD---YLPPEMIEGRM 182
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
+++ D+WS GV+ Y L G PPF T + + + + FP D ++ ARDLI
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 238
Query: 279 GMLRVDPSTRLTAAEVLAHSWM 300
+L+ +PS R EVL H W+
Sbjct: 239 RLLKHNPSQRPMLREVLEHPWI 260
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 99/292 (33%), Positives = 147/292 (50%), Gaps = 20/292 (6%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
Y L + +G G F ++ TGE++A K + K+ L + D+ IK EIE + L H
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGS--DLPRIKTEIEALKNLR-HQ 68
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
++ L V E + + +++E C GGELF + R SE E RV+FR ++ V+Y H G
Sbjct: 69 HICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQG 128
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLH--GTVGSPFYIAPEVLAGG- 218
HRDLKPEN+L +KL DFGL K ++ H GS Y APE++ G
Sbjct: 129 YAHRDLKPENLLF---DEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKS 185
Query: 219 -YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLI 277
ADVWS G++LY+L+ G PF ++ + P W +S S+ L+
Sbjct: 186 YLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPK--W--LSPSSILLL 241
Query: 278 MGMLRVDPSTRLTAAEVLAHSWMEE-----CEQVAQKP-CKQDDLCCKQLEV 323
ML+VDP R++ +L H W+ + E ++ P DD C +L V
Sbjct: 242 QQMLQVDPKKRISMKNLLNHPWIMQDYNYPVEWQSKNPFIHLDDDCVTELSV 293
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 141/262 (53%), Gaps = 14/262 (5%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ +G+ LG G+FG + +K + +LA K + K +L ++ E+EI + L HP
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 68
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
N++ L + + V+L++E G ++ L+K +F E L +SYCH
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQ--NLHGTVGSPFYIAPEVLAGG- 218
V+HRD+KPEN+LL S+ +K+ADFG + + + + +L GT+ Y+ PE++ G
Sbjct: 129 VIHRDIKPENLLLG---SAGELKIADFGWSVHAPSSRRTDLCGTLD---YLPPEMIEGRM 182
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
+++ D+WS GV+ Y L G PPF T + + + + FP D ++ ARDLI
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 238
Query: 279 GMLRVDPSTRLTAAEVLAHSWM 300
+L+ +PS R EVL H W+
Sbjct: 239 RLLKHNPSQRPMLREVLEHPWI 260
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 140/262 (53%), Gaps = 14/262 (5%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ +G+ LG G+FG + +K + +LA K + K +L ++ E+EI + L HP
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 70
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
N++ L + + V+L++E G ++ L+K +F E L +SYCH
Sbjct: 71 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 130
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN--LHGTVGSPFYIAPEVLAGG- 218
V+HRD+KPEN+LL S+ +K+ADFG + + + + L GT+ Y+ PE++ G
Sbjct: 131 VIHRDIKPENLLLG---SAGELKIADFGWSVHAPSSRRXXLCGTLD---YLPPEMIEGRM 184
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
+++ D+WS GV+ Y L G PPF T + + + + FP D ++ ARDLI
Sbjct: 185 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 240
Query: 279 GMLRVDPSTRLTAAEVLAHSWM 300
+L+ +PS R EVL H W+
Sbjct: 241 RLLKHNPSQRPMLREVLEHPWI 262
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 148/284 (52%), Gaps = 19/284 (6%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ +G+ LG G+FG + +K + +LA K + K +L ++ E+EI + L HP
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 68
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
N++ L + + V+L++E G ++ L+K +F E L +SYCH
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN--LHGTVGSPFYIAPEVLAGG- 218
V+HRD+KPEN+LL S+ +K+ADFG + + + + L GT+ Y+ PE++ G
Sbjct: 129 VIHRDIKPENLLLG---SAGELKIADFGWSVHAPSSRRTELCGTLD---YLPPEMIEGRM 182
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
+++ D+WS GV+ Y L G PPF T + + + + FP D ++ ARDLI
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 238
Query: 279 GMLRVDPSTRLTAAEVLAHSWMEECEQVAQKP--CKQDDLCCKQ 320
+L+ +PS R EVL H W+ + KP C+ + KQ
Sbjct: 239 RLLKHNPSQRPMLREVLEHPWITAN---SSKPSNCQNKESASKQ 279
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 140/262 (53%), Gaps = 14/262 (5%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ +G+ LG G+FG + +K + +LA K + K +L ++ E+EI + L HP
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 69
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
N++ L + + V+L++E G ++ L+K +F E L +SYCH
Sbjct: 70 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 129
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN--LHGTVGSPFYIAPEVLAGG- 218
V+HRD+KPEN+LL S+ +K+ADFG + + + + L GT+ Y+ PE++ G
Sbjct: 130 VIHRDIKPENLLLG---SAGELKIADFGWSVHAPSSRRDTLCGTLD---YLPPEMIEGRM 183
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
+++ D+WS GV+ Y L G PPF T + + + + FP D ++ ARDLI
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 239
Query: 279 GMLRVDPSTRLTAAEVLAHSWM 300
+L+ +PS R EVL H W+
Sbjct: 240 RLLKHNPSQRPMLREVLEHPWI 261
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 151 bits (381), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 146/282 (51%), Gaps = 15/282 (5%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ +G+ LG G+FG + +K + +LA K + K +L ++ E+EI + L HP
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 71
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
N++ L + + V+L++E G ++ L+K +F E L +SYCH
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 131
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAGG-YN 220
V+HRD+KPEN+LL S+ +K+ADFG + + + + G+ Y+ PE++ G ++
Sbjct: 132 VIHRDIKPENLLLG---SAGELKIADFGWSVHAPSSRRA-ALCGTLDYLPPEMIEGRMHD 187
Query: 221 QAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGM 280
+ D+WS GV+ Y L G PPF T + + + + FP D ++ ARDLI +
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLISRL 243
Query: 281 LRVDPSTRLTAAEVLAHSWMEECEQVAQKP--CKQDDLCCKQ 320
L+ +PS R EVL H W+ + KP C+ + KQ
Sbjct: 244 LKHNPSQRPMLREVLEHPWITAN---SSKPSNCQNKESASKQ 282
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 151 bits (381), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 139/262 (53%), Gaps = 14/262 (5%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ +G+ LG G+FG + +K + +LA K + K +L ++ E+EI + L HP
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 73
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
N++ L + + V+L++E G ++ L+K +F E L +SYCH
Sbjct: 74 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 133
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN--LHGTVGSPFYIAPEVLAG-G 218
V+HRD+KPEN+LL S+ +K+ADFG + + + + L GT+ Y+ PE + G
Sbjct: 134 VIHRDIKPENLLLG---SAGELKIADFGWSVHAPSSRRTTLCGTLD---YLPPEXIEGRX 187
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
+++ D+WS GV+ Y L G PPF T + + + + FP D ++ ARDLI
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 243
Query: 279 GMLRVDPSTRLTAAEVLAHSWM 300
+L+ +PS R EVL H W+
Sbjct: 244 RLLKHNPSQRPXLREVLEHPWI 265
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 150 bits (380), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 147/274 (53%), Gaps = 16/274 (5%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D++ K LG G FG + K +G A K + K ++V ++ + E I+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN- 99
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
P +V L+ +++ ++++ME AGGE+F L + GRFSE AR ++ Y H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE-VLAGG 218
+++RDLKPEN+L+ + I++ DFG A +K G+P Y+APE +L+ G
Sbjct: 160 LDLIYRDLKPENLLIDQQGY---IQVTDFGFAKRVKG--RTWXLAGTPEYLAPEIILSKG 214
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
YN+A D W+ GV++Y + +G PPF+ +I++ + + +RFPS H S+ +DL+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 270
Query: 279 GMLRVDPSTRL-----TAAEVLAHSWMEECEQVA 307
+L+VD + R ++ H W + +A
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 141/262 (53%), Gaps = 14/262 (5%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ +G+ LG G+FG + +K + +LA K + K +L ++ E+EI + L HP
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 71
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
N++ L + + V+L++E G ++ L+K +F E L +SYCH
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 131
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQ--NLHGTVGSPFYIAPEVLAGG- 218
V+HRD+KPEN+LL S+ +K+ADFG + + + + +L GT+ Y+ PE++ G
Sbjct: 132 VIHRDIKPENLLLG---SAGELKIADFGWSVHAPSSRRDDLCGTLD---YLPPEMIEGRM 185
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
+++ D+WS GV+ Y L G PPF T + + + + FP D ++ ARDLI
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 241
Query: 279 GMLRVDPSTRLTAAEVLAHSWM 300
+L+ +PS R EVL H W+
Sbjct: 242 RLLKHNPSQRPMLREVLEHPWI 263
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 146/274 (53%), Gaps = 16/274 (5%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D++ K LG G FG + K TG A K + K ++V ++ + E I+ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN- 99
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
P +V L+ +++ ++++ME GGE+F L + GRFSE AR ++ Y H
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE-VLAGG 218
+++RDLKPEN+L+ + I++ DFG A +K G+P Y+APE +L+ G
Sbjct: 160 LDLIYRDLKPENLLIDQQGY---IQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 214
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
YN+A D W+ GV++Y + +G PPF+ +I++ + + +RFPS H S+ +DL+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 270
Query: 279 GMLRVDPSTRL-----TAAEVLAHSWMEECEQVA 307
+L+VD + R ++ H W + +A
Sbjct: 271 NLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIA 304
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 146/274 (53%), Gaps = 16/274 (5%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D++ K LG G FG + K TG A K + K ++V ++ + E I+ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN- 99
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
P +V L+ +++ ++++ME GGE+F L + GRFSE AR ++ Y H
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE-VLAGG 218
+++RDLKPEN+L+ + I++ DFG A +K G+P Y+APE +L+ G
Sbjct: 160 LDLIYRDLKPENLLIDQQGY---IQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 214
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
YN+A D W+ GV++Y + +G PPF+ +I++ + + +RFPS H S+ +DL+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 270
Query: 279 GMLRVDPSTRL-----TAAEVLAHSWMEECEQVA 307
+L+VD + R ++ H W + +A
Sbjct: 271 NLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIA 304
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 146/274 (53%), Gaps = 16/274 (5%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D++ K LG G FG + K TG A K + K ++V ++ + E I+ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN- 99
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
P +V L+ +++ ++++ME GGE+F L + GRFSE AR ++ Y H
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE-VLAGG 218
+++RDLKPEN+L+ + I++ DFG A +K G+P Y+APE +L+ G
Sbjct: 160 LDLIYRDLKPENLLIDQQGY---IQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 214
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
YN+A D W+ GV++Y + +G PPF+ +I++ + + +RFPS H S+ +DL+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 270
Query: 279 GMLRVDPSTRL-----TAAEVLAHSWMEECEQVA 307
+L+VD + R ++ H W + +A
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 146/274 (53%), Gaps = 16/274 (5%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D++ K LG G FG + K TG A K + K ++V ++ + E I+ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN- 100
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
P +V L+ +++ ++++ME GGE+F L + GRFSE AR ++ Y H
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE-VLAGG 218
+++RDLKPEN+++ + IK+ DFG A +K G+P Y+APE +L+ G
Sbjct: 161 LDLIYRDLKPENLMIDQQGY---IKVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 215
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
YN+A D W+ GV++Y + +G PPF+ +I++ + + +RFPS H S+ +DL+
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 271
Query: 279 GMLRVDPSTRL-----TAAEVLAHSWMEECEQVA 307
+L+VD + R ++ H W + +A
Sbjct: 272 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 305
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 147/274 (53%), Gaps = 16/274 (5%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D++ K LG G FG + K +G A K + K ++V ++ + E I+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN- 99
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
P +V L+ +++ ++++ME AGGE+F L + GRFSE AR ++ Y H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE-VLAGG 218
+++RDLKPEN+L+ + I++ DFG A +K G+P Y+APE +L+ G
Sbjct: 160 LDLIYRDLKPENLLIDQQGY---IQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 214
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
YN+A D W+ GV++Y + +G PPF+ +I++ + + +RFPS H S+ +DL+
Sbjct: 215 YNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 270
Query: 279 GMLRVDPSTRL-----TAAEVLAHSWMEECEQVA 307
+L+VD + R ++ H W + +A
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 138/260 (53%), Gaps = 10/260 (3%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ +G+ LG G+FG + +K + +LA K + K +L ++ E+EI + L HP
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 68
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
N++ L + + V+L++E G ++ L+K +F E L +SYCH
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAGG-YN 220
V+HRD+KPEN+LL S+ +K+ADFG + + + + G+ Y+ PE++ G ++
Sbjct: 129 VIHRDIKPENLLLG---SAGELKIADFGWSVHAPSSRRA-ALCGTLDYLPPEMIEGRMHD 184
Query: 221 QAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGM 280
+ D+WS GV+ Y L G PPF T + + + + FP D ++ ARDLI +
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLISRL 240
Query: 281 LRVDPSTRLTAAEVLAHSWM 300
L+ +PS R EVL H W+
Sbjct: 241 LKHNPSQRPMLREVLEHPWI 260
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 140/262 (53%), Gaps = 14/262 (5%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ +G+ LG G+FG + +K + +LA K + K +L ++ E+EI + L HP
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 71
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
N++ L + + V+L++E G ++ L+K +F E L +SYCH
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 131
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQ--NLHGTVGSPFYIAPEVLAGG- 218
V+HRD+KPEN+LL S+ +K+ADFG + + + + L GT+ Y+ PE++ G
Sbjct: 132 VIHRDIKPENLLLG---SAGELKIADFGWSVHAPSSRRTTLCGTLD---YLPPEMIEGRM 185
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
+++ D+WS GV+ Y L G PPF T + + + + FP D ++ ARDLI
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 241
Query: 279 GMLRVDPSTRLTAAEVLAHSWM 300
+L+ +PS R EVL H W+
Sbjct: 242 RLLKHNPSQRPMLREVLEHPWI 263
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 140/262 (53%), Gaps = 14/262 (5%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ +G+ LG G+FG + +K + +LA K + K +L ++ E+EI + L HP
Sbjct: 9 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 67
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
N++ L + + V+L++E G ++ L+K +F E L +SYCH
Sbjct: 68 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 127
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQ--NLHGTVGSPFYIAPEVLAGG- 218
V+HRD+KPEN+LL S+ +K+ADFG + + + + L GT+ Y+ PE++ G
Sbjct: 128 VIHRDIKPENLLLG---SAGELKIADFGWSVHAPSSRRTTLCGTLD---YLPPEMIEGRM 181
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
+++ D+WS GV+ Y L G PPF T + + + + FP D ++ ARDLI
Sbjct: 182 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 237
Query: 279 GMLRVDPSTRLTAAEVLAHSWM 300
+L+ +PS R EVL H W+
Sbjct: 238 RLLKHNPSQRPMLREVLEHPWI 259
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 147/274 (53%), Gaps = 16/274 (5%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D++ K LG G FG + K +G A K + K ++V ++ + E I+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN- 99
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
P +V L+ +++ ++++ME AGGE+F L + GRFSE AR ++ Y H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE-VLAGG 218
+++RDLKPEN+L+ + I++ DFG A +K G+P Y+APE +L+ G
Sbjct: 160 LDLIYRDLKPENLLIDQQGY---IQVTDFGFAKRVKG--RTWXLXGTPEYLAPEIILSKG 214
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
YN+A D W+ GV++Y + +G PPF+ +I++ + + +RFPS H S+ +DL+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 270
Query: 279 GMLRVDPSTRL-----TAAEVLAHSWMEECEQVA 307
+L+VD + R ++ H W + +A
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 137/260 (52%), Gaps = 10/260 (3%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ +G+ LG G+FG + +K + +LA K + K +L ++ E+EI + L HP
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 68
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
N++ L + + V+L++E G ++ L+K +F E L +SYCH
Sbjct: 69 NILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKK 128
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAGG-YN 220
V+HRD+KPEN+LL S+ +K+ADFG + + + + G+ Y+ PE++ G ++
Sbjct: 129 VIHRDIKPENLLLG---SAGELKIADFGWSVHAPSSRRA-ALCGTLDYLPPEMIEGRMHD 184
Query: 221 QAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGM 280
+ D+WS GV+ Y L G PPF T + + + FP D ++ ARDLI +
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFP----DFVTEGARDLISRL 240
Query: 281 LRVDPSTRLTAAEVLAHSWM 300
L+ +PS R EVL H W+
Sbjct: 241 LKHNPSQRPMLREVLEHPWI 260
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 140/262 (53%), Gaps = 14/262 (5%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ +G+ LG G+FG + +K + +LA K + K +L ++ E+EI + L HP
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 68
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
N++ L + + V+L++E G ++ L+K +F E L +SYCH
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN--LHGTVGSPFYIAPEVLAGG- 218
V+HRD+KPEN+LL S+ +K+ADFG + + + + L GT+ Y+ PE++ G
Sbjct: 129 VIHRDIKPENLLLG---SAGELKIADFGWSVHAPSSRRTXLCGTLD---YLPPEMIEGRM 182
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
+++ D+WS GV+ Y L G PPF T + + + + FP D ++ ARDLI
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 238
Query: 279 GMLRVDPSTRLTAAEVLAHSWM 300
+L+ +PS R EVL H W+
Sbjct: 239 RLLKHNPSQRPMLREVLEHPWI 260
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 146/274 (53%), Gaps = 16/274 (5%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D++ K LG G FG + K TG A K + K ++V ++ + E I+ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN- 100
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
P +V L+ +++ ++++ME GGE+F L + GRFSE AR ++ Y H
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE-VLAGG 218
+++RDLKPEN+L+ + I++ DFG A +K G+P Y+APE +L+ G
Sbjct: 161 LDLIYRDLKPENLLIDQQGY---IQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 215
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
YN+A D W+ GV++Y + +G PPF+ +I++ + + +RFPS H S+ +DL+
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 271
Query: 279 GMLRVDPSTRL-----TAAEVLAHSWMEECEQVA 307
+L+VD + R ++ H W + +A
Sbjct: 272 NLLQVDLTKRFGNLKNGVNDIXNHKWFATTDWIA 305
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 140/262 (53%), Gaps = 14/262 (5%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ +G+ LG G+FG + +K + +LA K + K +L ++ E+EI + L HP
Sbjct: 14 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 72
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
N++ L + + V+L++E G ++ L+K +F E L +SYCH
Sbjct: 73 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 132
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQ--NLHGTVGSPFYIAPEVLAGG- 218
V+HRD+KPEN+LL S+ +K+ADFG + + + + L GT+ Y+ PE++ G
Sbjct: 133 VIHRDIKPENLLLG---SAGELKIADFGWSVHAPSSRRTTLCGTLD---YLPPEMIEGRM 186
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
+++ D+WS GV+ Y L G PPF T + + + + FP D ++ ARDLI
Sbjct: 187 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 242
Query: 279 GMLRVDPSTRLTAAEVLAHSWM 300
+L+ +PS R EVL H W+
Sbjct: 243 RLLKHNPSQRPMLREVLEHPWI 264
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 140/262 (53%), Gaps = 14/262 (5%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ +G+ LG G+FG + +K + +LA K + K +L ++ E+EI + L HP
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 71
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
N++ L + + V+L++E G ++ L+K +F E L +SYCH
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 131
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN--LHGTVGSPFYIAPEVLAGG- 218
V+HRD+KPEN+LL S+ +K+ADFG + + + + L GT+ Y+ PE++ G
Sbjct: 132 VIHRDIKPENLLLG---SAGELKIADFGWSVHAPSSRRXXLCGTLD---YLPPEMIEGRM 185
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
+++ D+WS GV+ Y L G PPF T + + + + FP D ++ ARDLI
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 241
Query: 279 GMLRVDPSTRLTAAEVLAHSWM 300
+L+ +PS R EVL H W+
Sbjct: 242 RLLKHNPSQRPMLREVLEHPWI 263
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 140/262 (53%), Gaps = 14/262 (5%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ +G+ LG G+FG + +K + +LA K + K +L ++ E+EI + L HP
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 68
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
N++ L + + V+L++E G ++ L+K +F E L +SYCH
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN--LHGTVGSPFYIAPEVLAGG- 218
V+HRD+KPEN+LL S+ +K+ADFG + + + + L GT+ Y+ PE++ G
Sbjct: 129 VIHRDIKPENLLLG---SAGELKIADFGWSVHAPSSRRXXLCGTLD---YLPPEMIEGRM 182
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
+++ D+WS GV+ Y L G PPF T + + + + FP D ++ ARDLI
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 238
Query: 279 GMLRVDPSTRLTAAEVLAHSWM 300
+L+ +PS R EVL H W+
Sbjct: 239 RLLKHNPSQRPMLREVLEHPWI 260
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 147/274 (53%), Gaps = 16/274 (5%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D++ K LG G FG + K +G A K + K ++V ++ + E I+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN- 99
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
P +V L+ +++ ++++ME AGGE+F L + GRFSE AR ++ Y H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE-VLAGG 218
+++RDLKPEN+L+ + I++ DFG A +K G+P Y+APE +L+ G
Sbjct: 160 LDLIYRDLKPENLLIDQQGY---IQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 214
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
YN+A D W+ GV++Y + +G PPF+ +I++ + + +RFPS H S+ +DL+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 270
Query: 279 GMLRVDPSTRL-----TAAEVLAHSWMEECEQVA 307
+L+VD + R ++ H W + +A
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 147/274 (53%), Gaps = 16/274 (5%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D++ K LG G FG + K +G A K + K ++V ++ + E I+ ++
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN- 120
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
P +V L+ +++ ++++ME AGGE+F L + GRFSE AR ++ Y H
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 180
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE-VLAGG 218
+++RDLKPEN+L+ + I++ DFG A +K G+P Y+APE +L+ G
Sbjct: 181 LDLIYRDLKPENLLIDQQGY---IQVTDFGFAKRVKGAT--WTLCGTPEYLAPEIILSKG 235
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
YN+A D W+ GV++Y + +G PPF+ +I++ + + +RFPS H S+ +DL+
Sbjct: 236 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 291
Query: 279 GMLRVDPSTRL-----TAAEVLAHSWMEECEQVA 307
+L+VD + R ++ H W + +A
Sbjct: 292 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 325
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 147/274 (53%), Gaps = 16/274 (5%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D++ K LG G FG + K +G A K + K ++V ++ + E I+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN- 99
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
P +V L+ +++ ++++ME AGGE+F L + GRFSE AR ++ Y H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE-VLAGG 218
+++RDLKPEN+L+ + I++ DFG A +K G+P Y+APE +L+ G
Sbjct: 160 LDLIYRDLKPENLLIDQQGY---IQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 214
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
YN+A D W+ GV++Y + +G PPF+ +I++ + + +RFPS H S+ +DL+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 270
Query: 279 GMLRVDPSTRL-----TAAEVLAHSWMEECEQVA 307
+L+VD + R ++ H W + +A
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 147/274 (53%), Gaps = 16/274 (5%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D++ K LG G FG + K +G A K + K ++V ++ + E I+ ++
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN- 100
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
P +V L+ +++ ++++ME AGGE+F L + GRFSE AR ++ Y H
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE-VLAGG 218
+++RDLKPEN+L+ + I++ DFG A +K G+P Y+APE +L+ G
Sbjct: 161 LDLIYRDLKPENLLIDQQGY---IQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 215
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
YN+A D W+ GV++Y + +G PPF+ +I++ + + +RFPS H S+ +DL+
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 271
Query: 279 GMLRVDPSTRL-----TAAEVLAHSWMEECEQVA 307
+L+VD + R ++ H W + +A
Sbjct: 272 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 305
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 135/262 (51%), Gaps = 10/262 (3%)
Query: 41 RYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH 100
RY+ G+ LG G F E +D T EV A K + K L+ + EI I L +
Sbjct: 27 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD-N 85
Query: 101 PNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGN 160
P+VV +E++D+V++++E+C L ++ +E EAR R +Q V Y H N
Sbjct: 86 PHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN 145
Query: 161 GVVHRDLKPENILLATKSSSSPIKLADFGLATYIK-AGQNLHGTVGSPFYIAPEVL-AGG 218
V+HRDLK N+ L + +K+ DFGLAT I+ G+ G+P YIAPEVL G
Sbjct: 146 RVIHRDLKLGNLFL---NDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKG 202
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
++ D+WS G ILY LL G PPF + + ++ + P HI+ A LI
Sbjct: 203 HSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR----HINPVASALIR 258
Query: 279 GMLRVDPSTRLTAAEVLAHSWM 300
ML DP+ R + AE+L +
Sbjct: 259 RMLHADPTLRPSVAELLTDEFF 280
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 146/274 (53%), Gaps = 16/274 (5%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D++ K LG G FG + K TG A K + K ++V ++ + E I+ ++
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN- 92
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
P +V L+ +++ ++++ME GGE+F L + GRFSE AR ++ Y H
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 152
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE-VLAGG 218
+++RDLKPEN+L+ + I++ DFG A +K G+P Y+APE +L+ G
Sbjct: 153 LDLIYRDLKPENLLIDQQGY---IQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 207
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
YN+A D W+ GV++Y + +G PPF+ +I++ + + +RFPS H S+ +DL+
Sbjct: 208 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 263
Query: 279 GMLRVDPSTRL-----TAAEVLAHSWMEECEQVA 307
+L+VD + R ++ H W + +A
Sbjct: 264 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 297
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 147/274 (53%), Gaps = 16/274 (5%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D++ K LG G FG + K +G A K + K ++V ++ + E I+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN- 99
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
P +V L+ +++ ++++ME AGGE+F L + GRFSE AR ++ Y H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE-VLAGG 218
+++RDLKPEN+L+ + I++ DFG A +K G+P Y+APE +L+ G
Sbjct: 160 LDLIYRDLKPENLLIDQQGY---IQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 214
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
YN+A D W+ GV++Y + +G PPF+ +I++ + + +RFPS H S+ +DL+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 270
Query: 279 GMLRVDPSTRL-----TAAEVLAHSWMEECEQVA 307
+L+VD + R ++ H W + +A
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 148/284 (52%), Gaps = 19/284 (6%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ +G+ LG G+FG + +K + +LA K + K +L ++ E+EI + L HP
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 70
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
N++ L + + V+L++E G ++ L+K +F E L +SYCH
Sbjct: 71 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 130
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQ--NLHGTVGSPFYIAPEVLAGG- 218
V+HRD+KPEN+LL S+ +K+A+FG + + + + L GT+ Y+ PE++ G
Sbjct: 131 VIHRDIKPENLLLG---SAGELKIANFGWSVHAPSSRRTTLCGTLD---YLPPEMIEGRM 184
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
+++ D+WS GV+ Y L G PPF T + + + + FP D ++ ARDLI
Sbjct: 185 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 240
Query: 279 GMLRVDPSTRLTAAEVLAHSWMEECEQVAQKP--CKQDDLCCKQ 320
+L+ +PS R EVL H W+ + KP C+ + KQ
Sbjct: 241 RLLKHNPSQRPMLREVLEHPWITAN---SSKPSNCQNKESASKQ 281
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 147/274 (53%), Gaps = 16/274 (5%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D++ K LG G FG + K +G A K + K ++V ++ + E I+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN- 99
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
P +V L+ +++ ++++ME AGGE+F L + GRFSE AR ++ Y H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE-VLAGG 218
+++RDLKPEN+L+ + I++ DFG A +K G+P Y+APE +L+ G
Sbjct: 160 LDLIYRDLKPENLLIDQQGY---IQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 214
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
YN+A D W+ GV++Y + +G PPF+ +I++ + + +RFPS H S+ +DL+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 270
Query: 279 GMLRVDPSTRL-----TAAEVLAHSWMEECEQVA 307
+L+VD + R ++ H W + +A
Sbjct: 271 NLLQVDLTKRFGNLPNGVNDIKNHKWFATTDWIA 304
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 147/274 (53%), Gaps = 16/274 (5%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D++ K LG G FG + TG A K + K ++V ++++ E I+ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN- 99
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
P +V L+ +++ ++++ME GGE+F L + GRFSE AR ++ Y H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE-VLAGG 218
+++RDLKPEN+++ + IK+ DFGLA +K G+P Y+APE +L+ G
Sbjct: 160 LDLIYRDLKPENLMIDQQGY---IKVTDFGLAKRVKG--RTWXLCGTPEYLAPEIILSKG 214
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
YN+A D W+ GV++Y + +G PPF+ +I++ + + +RFPS H S+ +DL+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 270
Query: 279 GMLRVDPSTRL-----TAAEVLAHSWMEECEQVA 307
+L+VD + R ++ H W + +A
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 135/262 (51%), Gaps = 10/262 (3%)
Query: 41 RYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH 100
RY+ G+ LG G F E +D T EV A K + K L+ + EI I L +
Sbjct: 43 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD-N 101
Query: 101 PNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGN 160
P+VV +E++D+V++++E+C L ++ +E EAR R +Q V Y H N
Sbjct: 102 PHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN 161
Query: 161 GVVHRDLKPENILLATKSSSSPIKLADFGLATYIK-AGQNLHGTVGSPFYIAPEVL-AGG 218
V+HRDLK N+ L + +K+ DFGLAT I+ G+ G+P YIAPEVL G
Sbjct: 162 RVIHRDLKLGNLFL---NDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKG 218
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
++ D+WS G ILY LL G PPF + + ++ + P HI+ A LI
Sbjct: 219 HSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR----HINPVASALIR 274
Query: 279 GMLRVDPSTRLTAAEVLAHSWM 300
ML DP+ R + AE+L +
Sbjct: 275 RMLHADPTLRPSVAELLTDEFF 296
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 146/274 (53%), Gaps = 16/274 (5%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D++ K LG G FG + K TG A K + K ++V ++ + E I+ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN- 100
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
P +V L+ +++ ++++ME GGE+F L + GRFSE AR ++ Y H
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE-VLAGG 218
+++RDLKPEN+L+ + I++ DFG A +K G+P Y+APE +L+ G
Sbjct: 161 LDLIYRDLKPENLLIDQQGY---IQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 215
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
YN+A D W+ GV++Y + +G PPF+ +I++ + + +RFPS H S+ +DL+
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 271
Query: 279 GMLRVDPSTRL-----TAAEVLAHSWMEECEQVA 307
+L+VD + R ++ H W + +A
Sbjct: 272 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 305
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 146/274 (53%), Gaps = 16/274 (5%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D++ K LG G FG + K TG A K + K ++V ++ + E I+ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN- 100
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
P +V L+ +++ ++++ME GGE+F L + GRFSE AR ++ Y H
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE-VLAGG 218
+++RDLKPEN+L+ + I++ DFG A +K G+P Y+APE +L+ G
Sbjct: 161 LDLIYRDLKPENLLIDQQGY---IQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 215
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
YN+A D W+ GV++Y + +G PPF+ +I++ + + +RFPS H S+ +DL+
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 271
Query: 279 GMLRVDPSTRL-----TAAEVLAHSWMEECEQVA 307
+L+VD + R ++ H W + +A
Sbjct: 272 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 305
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 146/274 (53%), Gaps = 16/274 (5%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D++ K LG G FG + K TG A K + K ++V ++ + E I+ ++
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN- 120
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
P +V L+ +++ ++++ME GGE+F L + GRFSE AR ++ Y H
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 180
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE-VLAGG 218
+++RDLKPEN+L+ + I++ DFG A +K G+P Y+APE +L+ G
Sbjct: 181 LDLIYRDLKPENLLIDQQGY---IQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 235
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
YN+A D W+ GV++Y + +G PPF+ +I++ + + +RFPS H S+ +DL+
Sbjct: 236 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 291
Query: 279 GMLRVDPSTRL-----TAAEVLAHSWMEECEQVA 307
+L+VD + R ++ H W + +A
Sbjct: 292 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 325
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 135/262 (51%), Gaps = 10/262 (3%)
Query: 41 RYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH 100
RY+ G+ LG G F E +D T EV A K + K L+ + EI I L +
Sbjct: 43 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD-N 101
Query: 101 PNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGN 160
P+VV +E++D+V++++E+C L ++ +E EAR R +Q V Y H N
Sbjct: 102 PHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN 161
Query: 161 GVVHRDLKPENILLATKSSSSPIKLADFGLATYIK-AGQNLHGTVGSPFYIAPEVL-AGG 218
V+HRDLK N+ L + +K+ DFGLAT I+ G+ G+P YIAPEVL G
Sbjct: 162 RVIHRDLKLGNLFL---NDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKG 218
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
++ D+WS G ILY LL G PPF + + ++ + P HI+ A LI
Sbjct: 219 HSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR----HINPVASALIR 274
Query: 279 GMLRVDPSTRLTAAEVLAHSWM 300
ML DP+ R + AE+L +
Sbjct: 275 RMLHADPTLRPSVAELLTDEFF 296
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 135/262 (51%), Gaps = 10/262 (3%)
Query: 41 RYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH 100
RY+ G+ LG G F E +D T EV A K + K L+ + EI I L +
Sbjct: 43 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD-N 101
Query: 101 PNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGN 160
P+VV +E++D+V++++E+C L ++ +E EAR R +Q V Y H N
Sbjct: 102 PHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN 161
Query: 161 GVVHRDLKPENILLATKSSSSPIKLADFGLATYIK-AGQNLHGTVGSPFYIAPEVL-AGG 218
V+HRDLK N+ L + +K+ DFGLAT I+ G+ G+P YIAPEVL G
Sbjct: 162 RVIHRDLKLGNLFL---NDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKG 218
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
++ D+WS G ILY LL G PPF + + ++ + P HI+ A LI
Sbjct: 219 HSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR----HINPVASALIR 274
Query: 279 GMLRVDPSTRLTAAEVLAHSWM 300
ML DP+ R + AE+L +
Sbjct: 275 RMLHADPTLRPSVAELLTDEFF 296
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 147/274 (53%), Gaps = 16/274 (5%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D++ K LG G FG + K +G A K + K ++V ++ + E I+ ++
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN- 86
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
P +V L+ +++ ++++ME AGGE+F L + GRFSE AR ++ Y H
Sbjct: 87 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 146
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE-VLAGG 218
+++RDLKPEN+L+ + I++ DFG A +K G+P Y+APE +L+ G
Sbjct: 147 LDLIYRDLKPENLLIDEQGY---IQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 201
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
YN+A D W+ GV++Y + +G PPF+ +I++ + + +RFPS H S+ +DL+
Sbjct: 202 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 257
Query: 279 GMLRVDPSTRL-----TAAEVLAHSWMEECEQVA 307
+L+VD + R ++ H W + +A
Sbjct: 258 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 291
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 146/274 (53%), Gaps = 16/274 (5%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D++ + LG G FG + K TG A K + K ++V ++ + E I ++
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVN- 100
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
P +V L+ +++ +++++E GGE+F L + GRFSE AR ++ Y H
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE-VLAGG 218
+++RDLKPEN+L+ + IK+ADFG A +K G+P Y+APE +L+ G
Sbjct: 161 LDLIYRDLKPENLLIDQQGY---IKVADFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 215
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
YN+A D W+ GV++Y + +G PPF+ +I++ + + +RFPS H S+ +DL+
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 271
Query: 279 GMLRVDPSTRL-----TAAEVLAHSWMEECEQVA 307
+L+VD + R ++ H W + +A
Sbjct: 272 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 305
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 139/262 (53%), Gaps = 14/262 (5%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ +G+ LG G+FG + +K +LA K + K +L ++ E+EI + L HP
Sbjct: 7 FEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 65
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
N++ L + + V+L++E G ++ L+K +F E L +SYCH
Sbjct: 66 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 125
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQ--NLHGTVGSPFYIAPEVLAGG- 218
V+HRD+KPEN+LL S+ +K+ADFG + + + + L GT+ Y+ PE++ G
Sbjct: 126 VIHRDIKPENLLLG---SAGELKIADFGWSVHAPSSRRTTLCGTLD---YLPPEMIEGRM 179
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
+++ D+WS GV+ Y L G PPF T + + + + FP D ++ ARDLI
Sbjct: 180 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 235
Query: 279 GMLRVDPSTRLTAAEVLAHSWM 300
+L+ +PS R EVL H W+
Sbjct: 236 RLLKHNPSQRPMLREVLEHPWI 257
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 146/274 (53%), Gaps = 16/274 (5%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D++ K +G G FG + TG A K + K ++V ++ + E I+ ++
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN- 99
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
P +V L+ +++ ++++ME GGE+F L + GRFSE AR ++ Y H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE-VLAGG 218
+++RDLKPEN+L+ + IK+ADFG A +K G+P Y+APE +L+ G
Sbjct: 160 LDLIYRDLKPENLLIDQQGY---IKVADFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 214
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
YN+A D W+ GV++Y + +G PPF+ +I++ + + +RFPS H S+ +DL+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 270
Query: 279 GMLRVDPSTRL-----TAAEVLAHSWMEECEQVA 307
+L+VD + R ++ H W + +A
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 146/274 (53%), Gaps = 16/274 (5%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D++ K LG G FG + TG A K + K ++V ++ + E I+ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN- 99
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
P +V L+ +++ ++++ME AGGE+F L + GRFSE AR ++ Y H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE-VLAGG 218
+++RDLKPEN+L+ + I++ DFG A +K G+P Y+APE +L+ G
Sbjct: 160 LDLIYRDLKPENLLIDQQGY---IQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 214
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
YN+A D W+ GV++Y + +G PPF+ +I++ + + +RFPS H S+ +DL+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 270
Query: 279 GMLRVDPSTRL-----TAAEVLAHSWMEECEQVA 307
+L+VD + R ++ H W + +A
Sbjct: 271 NLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIA 304
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 140/262 (53%), Gaps = 14/262 (5%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ +G+ LG G+FG + +K + +LA K + K +L ++ E+EI + L HP
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HP 71
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
N++ L + + V+L++E G ++ L+K +F E L +SYCH
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 131
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN--LHGTVGSPFYIAPEVLAGG- 218
V+HRD+KPEN+LL S+ +K+A+FG + + + + L GT+ Y+ PE++ G
Sbjct: 132 VIHRDIKPENLLLG---SAGELKIANFGWSVHAPSSRRTTLCGTLD---YLPPEMIEGRM 185
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
+++ D+WS GV+ Y L G PPF T + + + + FP D ++ ARDLI
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 241
Query: 279 GMLRVDPSTRLTAAEVLAHSWM 300
+L+ +PS R EVL H W+
Sbjct: 242 RLLKHNPSQRPMLREVLEHPWI 263
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 147/274 (53%), Gaps = 16/274 (5%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D++ K LG G FG + K +G A K + K ++V ++ + E I+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN- 99
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
P +V L+ +++ ++++ME AGGE+F L + GRF+E AR ++ Y H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHS 159
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE-VLAGG 218
+++RDLKPEN+L+ + I++ DFG A +K G+P Y+APE +L+ G
Sbjct: 160 LDLIYRDLKPENLLIDQQGY---IQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 214
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
YN+A D W+ GV++Y + +G PPF+ +I++ + + +RFPS H S+ +DL+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 270
Query: 279 GMLRVDPSTRL-----TAAEVLAHSWMEECEQVA 307
+L+VD + R ++ H W + +A
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 148 bits (374), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 146/274 (53%), Gaps = 16/274 (5%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D++ K LG G FG + K +G A K + K ++V ++ + E I+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN- 99
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
P +V L+ +++ ++++ME AGGE+F L + GRF E AR ++ Y H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE-VLAGG 218
+++RDLKPEN+L+ + I++ DFG A +K G+P Y+APE +L+ G
Sbjct: 160 LDLIYRDLKPENLLIDQQGY---IQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 214
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
YN+A D W+ GV++Y + +G PPF+ +I++ + + +RFPS H S+ +DL+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 270
Query: 279 GMLRVDPSTRL-----TAAEVLAHSWMEECEQVA 307
+L+VD + R ++ H W + +A
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 148 bits (374), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 146/274 (53%), Gaps = 16/274 (5%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D++ K LG G FG + K +G A K + K ++V ++ + E I+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN- 99
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
P +V L+ +++ ++++ME AGGE+F L + GRF E AR ++ Y H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE-VLAGG 218
+++RDLKPEN+L+ + I++ DFG A +K G+P Y+APE +L+ G
Sbjct: 160 LDLIYRDLKPENLLIDQQGY---IQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 214
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
YN+A D W+ GV++Y + +G PPF+ +I++ + + +RFPS H S+ +DL+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 270
Query: 279 GMLRVDPSTRL-----TAAEVLAHSWMEECEQVA 307
+L+VD + R ++ H W + +A
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 148 bits (374), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 95/276 (34%), Positives = 145/276 (52%), Gaps = 15/276 (5%)
Query: 28 TILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSI 87
++ D I N Y + K LG G FG ++ TG+ +A K I K L + I
Sbjct: 6 SLADGAHIGN----YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRI 61
Query: 88 KLEIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIF 147
+ EI + +L HP+++ L V + +D + +++E AG ELF + + + SE EAR F
Sbjct: 62 EREISYL-RLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFF 119
Query: 148 RHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSP 207
+ ++ V YCH + +VHRDLKPEN+LL + +K+ADFGL+ + G L + GSP
Sbjct: 120 QQIISAVEYCHRHKIVHRDLKPENLLLDEHLN---VKIADFGLSNIMTDGNFLKTSCGSP 176
Query: 208 FYIAPEVLAGGY--NQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDP 265
Y APEV++G DVWS GVILY++L PF ++ +F + P
Sbjct: 177 NYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK-- 234
Query: 266 WDHISASARDLIMGMLRVDPSTRLTAAEVLAHSWME 301
+S A LI ML V+P R++ E++ W +
Sbjct: 235 --FLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFK 268
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 148 bits (374), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 147/274 (53%), Gaps = 16/274 (5%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D++ K LG G FG + TG A K + K ++V ++++ E I+ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN- 99
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
P +V L+ +++ ++++ME GGE+F L + GRFSE AR ++ Y H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE-VLAGG 218
+++RDLKPEN+++ + I++ DFGLA +K G+P Y+APE +L+ G
Sbjct: 160 LDLIYRDLKPENLMIDQQGY---IQVTDFGLAKRVKG--RTWXLCGTPEYLAPEIILSKG 214
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
YN+A D W+ GV++Y + +G PPF+ +I++ + + +RFPS H S+ +DL+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 270
Query: 279 GMLRVDPSTRL-----TAAEVLAHSWMEECEQVA 307
+L+VD + R ++ H W + +A
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 148 bits (374), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 146/274 (53%), Gaps = 16/274 (5%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D++ K LG G FG + K +G A K + K ++V ++ + E I+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN- 99
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
P +V L+ +++ ++++ME AGGE+F L + GRF E AR ++ Y H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE-VLAGG 218
+++RDLKPEN+L+ + I++ DFG A +K G+P Y+APE +L+ G
Sbjct: 160 LDLIYRDLKPENLLIDQQGY---IQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 214
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
YN+A D W+ GV++Y + +G PPF+ +I++ + + +RFPS H S+ +DL+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 270
Query: 279 GMLRVDPSTRL-----TAAEVLAHSWMEECEQVA 307
+L+VD + R ++ H W + +A
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 148 bits (374), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 95/276 (34%), Positives = 145/276 (52%), Gaps = 15/276 (5%)
Query: 28 TILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSI 87
++ D I N Y + K LG G FG ++ TG+ +A K I K L + I
Sbjct: 5 SLADGAHIGN----YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRI 60
Query: 88 KLEIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIF 147
+ EI + +L HP+++ L V + +D + +++E AG ELF + + + SE EAR F
Sbjct: 61 EREISYL-RLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFF 118
Query: 148 RHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSP 207
+ ++ V YCH + +VHRDLKPEN+LL + +K+ADFGL+ + G L + GSP
Sbjct: 119 QQIISAVEYCHRHKIVHRDLKPENLLLDEHLN---VKIADFGLSNIMTDGNFLKTSCGSP 175
Query: 208 FYIAPEVLAGGY--NQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDP 265
Y APEV++G DVWS GVILY++L PF ++ +F + P
Sbjct: 176 NYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK-- 233
Query: 266 WDHISASARDLIMGMLRVDPSTRLTAAEVLAHSWME 301
+S A LI ML V+P R++ E++ W +
Sbjct: 234 --FLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFK 267
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 148 bits (374), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 146/274 (53%), Gaps = 16/274 (5%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D++ K LG G FG + K +G A K + K ++V ++ + E I+ ++
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN- 94
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
P +V L+ +++ ++++ME AGGE+F L + GRF E AR ++ Y H
Sbjct: 95 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 154
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE-VLAGG 218
+++RDLKPEN+L+ + I++ DFG A +K G+P Y+APE +L+ G
Sbjct: 155 LDLIYRDLKPENLLIDQQGY---IQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 209
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
YN+A D W+ GV++Y + +G PPF+ +I++ + + +RFPS H S+ +DL+
Sbjct: 210 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 265
Query: 279 GMLRVDPSTRL-----TAAEVLAHSWMEECEQVA 307
+L+VD + R ++ H W + +A
Sbjct: 266 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 299
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 148 bits (374), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 146/274 (53%), Gaps = 16/274 (5%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D++ K LG G FG + K +G A K + K ++V ++ + E I+ ++
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN- 120
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
P +V L+ +++ ++++ME AGGE+F L + GRF E AR ++ Y H
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 180
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE-VLAGG 218
+++RDLKPEN+L+ + I++ DFG A +K G+P Y+APE +L+ G
Sbjct: 181 LDLIYRDLKPENLLIDQQGY---IQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 235
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
YN+A D W+ GV++Y + +G PPF+ +I++ + + +RFPS H S+ +DL+
Sbjct: 236 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 291
Query: 279 GMLRVDPSTRL-----TAAEVLAHSWMEECEQVA 307
+L+VD + R ++ H W + +A
Sbjct: 292 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 325
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 148 bits (373), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 145/274 (52%), Gaps = 16/274 (5%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D++ K LG G FG + TG A K + K ++V ++ + E I+ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN- 99
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
P +V L+ +++ ++++ME GGE+F L + GRFSE AR ++ Y H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE-VLAGG 218
+++RDLKPEN+++ + IK+ DFG A +K G+P Y+APE +L+ G
Sbjct: 160 LDLIYRDLKPENLMIDQQGY---IKVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 214
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
YN+A D W+ GV++Y + +G PPF+ +I++ + + +RFPS H S+ +DL+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 270
Query: 279 GMLRVDPSTRL-----TAAEVLAHSWMEECEQVA 307
+L+VD + R ++ H W + +A
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 148 bits (373), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 145/274 (52%), Gaps = 16/274 (5%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D++ K LG G FG + K TG A K + K ++V ++ + E I+ ++
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN- 92
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
P +V L+ +++ ++++ME GGE+F L + GRF E AR ++ Y H
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 152
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE-VLAGG 218
+++RDLKPEN+L+ + I++ DFG A +K G+P Y+APE +L+ G
Sbjct: 153 LDLIYRDLKPENLLIDQQGY---IQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 207
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
YN+A D W+ GV++Y + +G PPF+ +I++ + + +RFPS H S+ +DL+
Sbjct: 208 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 263
Query: 279 GMLRVDPSTRL-----TAAEVLAHSWMEECEQVA 307
+L+VD + R ++ H W + +A
Sbjct: 264 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 297
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 148 bits (373), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 147/274 (53%), Gaps = 16/274 (5%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D++ K LG G FG + K +G A K + K ++V ++ + E I+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN- 99
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
P +V L+ +++ ++++ME AGGE+F L + GRFSE AR ++ Y H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE-VLAGG 218
+++RDLKPEN+++ + I++ DFG A +K G+P Y+APE +++ G
Sbjct: 160 LDLIYRDLKPENLIIDQQGY---IQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIIISKG 214
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
YN+A D W+ GV++Y + +G PPF+ +I++ + + +RFPS H S+ +DL+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 270
Query: 279 GMLRVDPSTRL-----TAAEVLAHSWMEECEQVA 307
+L+VD + R ++ H W + +A
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 148 bits (373), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 146/274 (53%), Gaps = 16/274 (5%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D++ K LG G FG + K +G A K + K ++V ++ + E I+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN- 99
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
P +V L+ +++ ++++ME AGGE+F L + GRFSE AR ++ Y H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE-VLAGG 218
+++RDLKPEN+L+ + I++ DFG A +K G+P Y+AP +L+ G
Sbjct: 160 LDLIYRDLKPENLLIDQQGY---IQVTDFGFAKRVKG--RTWXLCGTPEYLAPAIILSKG 214
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
YN+A D W+ GV++Y + +G PPF+ +I++ + + +RFPS H S+ +DL+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 270
Query: 279 GMLRVDPSTRL-----TAAEVLAHSWMEECEQVA 307
+L+VD + R ++ H W + +A
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 147 bits (372), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 146/274 (53%), Gaps = 16/274 (5%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D++ K +G G FG + TG A K + K ++V ++ + E I+ ++
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN- 99
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
P +V L+ +++ ++++ME GG++F L + GRFSE AR ++ Y H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE-VLAGG 218
+++RDLKPEN+L+ + IK+ADFG A +K G+P Y+APE +L+ G
Sbjct: 160 LDLIYRDLKPENLLIDQQGY---IKVADFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 214
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
YN+A D W+ GV++Y + +G PPF+ +I++ + + +RFPS H S+ +DL+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 270
Query: 279 GMLRVDPSTRL-----TAAEVLAHSWMEECEQVA 307
+L+VD + R ++ H W + +A
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 147 bits (372), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 146/274 (53%), Gaps = 16/274 (5%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D++ K +G G FG + TG A K + K ++V ++ + E I+ ++
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN- 99
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
P +V L+ +++ ++++ME GG++F L + GRFSE AR ++ Y H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE-VLAGG 218
+++RDLKPEN+L+ + IK+ADFG A +K G+P Y+APE +L+ G
Sbjct: 160 LDLIYRDLKPENLLIDQQGY---IKVADFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 214
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
YN+A D W+ GV++Y + +G PPF+ +I++ + + +RFPS H S+ +DL+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 270
Query: 279 GMLRVDPSTRL-----TAAEVLAHSWMEECEQVA 307
+L+VD + R ++ H W + +A
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 147 bits (372), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 88/258 (34%), Positives = 143/258 (55%), Gaps = 9/258 (3%)
Query: 48 LGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLK 107
LG G+FG + +C + TG LA K I K R ++D +K EI +M +L H N++ L
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAK-IIKTR--GMKDKEEVKNEISVMNQLD-HANLIQLY 152
Query: 108 AVYEEEDYVHLLMELCAGGELFHRL--EKYGRFSETEARVIFRHLMQVVSYCHGNGVVHR 165
+E ++ + L+ME GGELF R+ E Y +E + + + + + + + H ++H
Sbjct: 153 DAFESKNDIVLVMEYVDGGELFDRIIDESYN-LTELDTILFMKQICEGIRHMHQMYILHL 211
Query: 166 DLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAGGY-NQAAD 224
DLKPENIL + + IK+ DFGLA K + L G+P ++APEV+ + + D
Sbjct: 212 DLKPENILCVNRDAKQ-IKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTD 270
Query: 225 VWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVD 284
+WS GVI Y+LLSG+ PF G ++ + + A + + IS A++ I +L +
Sbjct: 271 MWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKE 330
Query: 285 PSTRLTAAEVLAHSWMEE 302
S R++A+E L H W+ +
Sbjct: 331 KSWRISASEALKHPWLSD 348
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 147 bits (372), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 95/273 (34%), Positives = 143/273 (52%), Gaps = 15/273 (5%)
Query: 31 DATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLE 90
D I N Y + K LG G FG ++ TG+ +A K I K L + I+ E
Sbjct: 3 DGAHIGN----YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIERE 58
Query: 91 IEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHL 150
I + +L HP+++ L V + +D + +++E AG ELF + + + SE EAR F+ +
Sbjct: 59 ISYL-RLLRHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQI 116
Query: 151 MQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYI 210
+ V YCH + +VHRDLKPEN+LL + +K+ADFGL+ + G L + GSP Y
Sbjct: 117 ISAVEYCHRHKIVHRDLKPENLLLDEHLN---VKIADFGLSNIMTDGNFLKTSCGSPNYA 173
Query: 211 APEVLAGGY--NQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDH 268
APEV++G DVWS GVILY++L PF ++ +F + P
Sbjct: 174 APEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK----F 229
Query: 269 ISASARDLIMGMLRVDPSTRLTAAEVLAHSWME 301
+S A LI ML V+P R++ E++ W +
Sbjct: 230 LSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFK 262
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 145/274 (52%), Gaps = 16/274 (5%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D++ K LG G FG + TG A K + K ++V ++ + E I+ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN- 99
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
P +V L+ +++ ++++ME GGE+F L + GRFSE AR ++ Y H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE-VLAGG 218
+++RDLKPEN+L+ + I++ DFG A +K G+P Y+APE +L+ G
Sbjct: 160 LDLIYRDLKPENLLIDQQGY---IQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 214
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
YN+A D W+ GV++Y + +G PPF+ +I++ + + +RFPS H S+ +DL+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 270
Query: 279 GMLRVDPSTRL-----TAAEVLAHSWMEECEQVA 307
+L+VD + R ++ H W + +A
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 145/274 (52%), Gaps = 16/274 (5%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D++ K LG G FG + TG A K + K ++V ++ + E I+ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN- 99
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
P +V L+ +++ ++++ME GGE+F L + GRFSE AR ++ Y H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE-VLAGG 218
+++RDLKPEN+L+ + I++ DFG A +K G+P Y+APE +L+ G
Sbjct: 160 LDLIYRDLKPENLLIDQQGY---IQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 214
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
YN+A D W+ GV++Y + +G PPF+ +I++ + + +RFPS H S+ +DL+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 270
Query: 279 GMLRVDPSTRL-----TAAEVLAHSWMEECEQVA 307
+L+VD + R ++ H W + +A
Sbjct: 271 NLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIA 304
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 145/274 (52%), Gaps = 16/274 (5%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D++ K LG G FG + TG A K + K ++V ++ + E I+ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN- 100
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
P +V L+ +++ ++++ME GGE+F L + GRFSE AR ++ Y H
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE-VLAGG 218
+++RDLKPEN+L+ + I++ DFG A +K G+P Y+APE +L+ G
Sbjct: 161 LDLIYRDLKPENLLIDQQGY---IQVTDFGFAKRVKG--RTWTLCGTPEYLAPEIILSKG 215
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
YN+A D W+ GV++Y + +G PPF+ +I++ + + +RFPS H S+ +DL+
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 271
Query: 279 GMLRVDPSTRL-----TAAEVLAHSWMEECEQVA 307
+L+VD + R ++ H W + +A
Sbjct: 272 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 305
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 145/274 (52%), Gaps = 16/274 (5%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D++ K LG G FG + TG A K + K ++V ++ + E I+ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN- 99
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
P +V L+ +++ ++++ME GGE+F L + GRFSE AR ++ Y H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE-VLAGG 218
+++RDLKPEN+L+ + I++ DFG A +K G+P Y+APE +L+ G
Sbjct: 160 LDLIYRDLKPENLLIDQQGY---IQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 214
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
YN+A D W+ GV++Y + +G PPF+ +I++ + + +RFPS H S+ +DL+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 270
Query: 279 GMLRVDPSTRL-----TAAEVLAHSWMEECEQVA 307
+L+VD + R ++ H W + +A
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 145/274 (52%), Gaps = 16/274 (5%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D++ K LG G FG + TG A K + K ++V ++ + E I+ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN- 100
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
P +V L+ +++ ++++ME GGE+F L + GRFSE AR ++ Y H
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE-VLAGG 218
+++RDLKPEN+L+ + I++ DFG A +K G+P Y+APE +L+ G
Sbjct: 161 LDLIYRDLKPENLLIDQQGY---IQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 215
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
YN+A D W+ GV++Y + +G PPF+ +I++ + + +RFPS H S+ +DL+
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 271
Query: 279 GMLRVDPSTRL-----TAAEVLAHSWMEECEQVA 307
+L+VD + R ++ H W + +A
Sbjct: 272 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 305
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 146/274 (53%), Gaps = 16/274 (5%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D++ K LG G FG + K +G A K + K ++V ++ + E I+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN- 99
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
P +V L+ +++ ++++ME AGGE+F L + GRFSE AR ++ Y H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE-VLAGG 218
+++RDLKPEN+L+ + I++ DFG A +K G+P Y+APE +L+ G
Sbjct: 160 LDLIYRDLKPENLLIDQQGY---IQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 214
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
YN+A D W+ GV++Y + +G PPF+ +I++ + + +RFPS H S+ +DL+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 270
Query: 279 GMLRVDPSTRL-----TAAEVLAHSWMEECEQVA 307
+L+VD + ++ H W + +A
Sbjct: 271 NLLQVDLTKAFGNLKNGVNDIKNHKWFATTDWIA 304
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 151/284 (53%), Gaps = 23/284 (8%)
Query: 43 VLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLV-TVEDVRSIKLEIEIMTKLSGHP 101
VLGK G+G+ +R+ + TG++ A K + K +V +D K E I+ ++ HP
Sbjct: 24 VLGKG-GYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVK-HP 81
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
+VDL ++ ++L++E +GGELF +LE+ G F E A + + + H G
Sbjct: 82 FIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKG 141
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGL-ATYIKAGQNLHGTVGSPFYIAPEVLA-GGY 219
+++RDLKPENI+L + +KL DFGL I G H G+ Y+APE+L G+
Sbjct: 142 IIYRDLKPENIML---NHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGH 198
Query: 220 NQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMG 279
N+A D WS G ++Y +L+G PPF G+ + K D + L P +++ ARDL+
Sbjct: 199 NRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPP----YLTQEARDLLKK 254
Query: 280 MLRVDPSTRL-----TAAEVLAH------SWMEECEQVAQKPCK 312
+L+ + ++RL A EV AH +W E + + P K
Sbjct: 255 LLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPFK 298
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 145/274 (52%), Gaps = 16/274 (5%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D++ K LG G FG + TG A K + K ++V ++ + E I+ ++
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN- 85
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
P +V L+ +++ ++++ME GGE+F L + GRFSE AR ++ Y H
Sbjct: 86 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 145
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE-VLAGG 218
+++RDLKPEN+L+ + I++ DFG A +K G+P Y+APE +L+ G
Sbjct: 146 LDLIYRDLKPENLLIDQQGY---IQVTDFGFAKRVKG--RTWTLCGTPEYLAPEIILSKG 200
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
YN+A D W+ GV++Y + +G PPF+ +I++ + + +RFPS H S+ +DL+
Sbjct: 201 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 256
Query: 279 GMLRVDPSTRL-----TAAEVLAHSWMEECEQVA 307
+L+VD + R ++ H W + +A
Sbjct: 257 NLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIA 290
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 140/262 (53%), Gaps = 11/262 (4%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
Y + K LG G FG ++ TG+ +A K I K L + I+ EI + +L HP
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYL-RLLRHP 64
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
+++ L V + +D + +++E AG ELF + + + SE EAR F+ ++ V YCH +
Sbjct: 65 HIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK 123
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAGGY-- 219
+VHRDLKPEN+LL + +K+ADFGL+ + G L + GSP Y APEV++G
Sbjct: 124 IVHRDLKPENLLLDEHLN---VKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYA 180
Query: 220 NQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMG 279
DVWS GVILY++L PF ++ +F + P +S A LI
Sbjct: 181 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK----FLSPGAAGLIKR 236
Query: 280 MLRVDPSTRLTAAEVLAHSWME 301
ML V+P R++ E++ W +
Sbjct: 237 MLIVNPLNRISIHEIMQDDWFK 258
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 151/284 (53%), Gaps = 23/284 (8%)
Query: 43 VLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLV-TVEDVRSIKLEIEIMTKLSGHP 101
VLGK G+G+ +R+ + TG++ A K + K +V +D K E I+ ++ HP
Sbjct: 24 VLGKG-GYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVK-HP 81
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
+VDL ++ ++L++E +GGELF +LE+ G F E A + + + H G
Sbjct: 82 FIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKG 141
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGL-ATYIKAGQNLHGTVGSPFYIAPEVLA-GGY 219
+++RDLKPENI+L + +KL DFGL I G H G+ Y+APE+L G+
Sbjct: 142 IIYRDLKPENIML---NHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMRSGH 198
Query: 220 NQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMG 279
N+A D WS G ++Y +L+G PPF G+ + K D + L P +++ ARDL+
Sbjct: 199 NRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPP----YLTQEARDLLKK 254
Query: 280 MLRVDPSTRL-----TAAEVLAH------SWMEECEQVAQKPCK 312
+L+ + ++RL A EV AH +W E + + P K
Sbjct: 255 LLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPFK 298
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 145/274 (52%), Gaps = 16/274 (5%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D++ K LG G FG + TG A K + K ++V ++ + E I+ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN- 99
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
P +V L+ +++ ++++ME GGE+F L + GRFSE AR ++ Y H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE-VLAGG 218
+++RDLKPEN+++ + I++ DFG A +K G+P Y+APE +L+ G
Sbjct: 160 LDLIYRDLKPENLMIDQQGY---IQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 214
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
YN+A D W+ GV++Y + +G PPF+ +I++ + + +RFPS H S+ +DL+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 270
Query: 279 GMLRVDPSTRL-----TAAEVLAHSWMEECEQVA 307
+L+VD + R ++ H W + +A
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 146/274 (53%), Gaps = 16/274 (5%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D++ K LG G FG + K +G A K + K ++V ++ + E I+ ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN- 99
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
P +V L+ +++ ++++ME AGGE+F L + GRFSE AR ++ Y H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE-VLAGG 218
+++RDLKPEN+L+ + I++ DFG A +K G+P +APE +L+ G
Sbjct: 160 LDLIYRDLKPENLLIDQQGY---IQVTDFGFAKRVKG--RTWXLCGTPEALAPEIILSKG 214
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
YN+A D W+ GV++Y + +G PPF+ +I++ + + +RFPS H S+ +DL+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 270
Query: 279 GMLRVDPSTRL-----TAAEVLAHSWMEECEQVA 307
+L+VD + R ++ H W + +A
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 144/274 (52%), Gaps = 16/274 (5%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D++ K LG G FG + TG A K + K ++V ++ + E I+ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN- 100
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
P + L+ +++ ++++ME GGE+F L + GRFSE AR ++ Y H
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE-VLAGG 218
+++RDLKPEN+++ + IK+ DFG A +K G+P Y+APE +L+ G
Sbjct: 161 LDLIYRDLKPENLMIDQQGY---IKVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 215
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
YN+A D W+ GV++Y + +G PPF+ +I++ + + +RFPS H S+ +DL+
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 271
Query: 279 GMLRVDPSTRL-----TAAEVLAHSWMEECEQVA 307
+L+VD + R ++ H W + +A
Sbjct: 272 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 305
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 144/274 (52%), Gaps = 16/274 (5%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D++ K LG G FG + TG A K + K ++V ++ + E I+ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN- 100
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
P + L+ +++ ++++ME GGE+F L + GRFSE AR ++ Y H
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE-VLAGG 218
+++RDLKPEN+++ + IK+ DFG A +K G+P Y+APE +L+ G
Sbjct: 161 LDLIYRDLKPENLMIDQQGY---IKVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 215
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
YN+A D W+ GV++Y + +G PPF+ +I++ + + +RFPS H S+ +DL+
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 271
Query: 279 GMLRVDPSTRL-----TAAEVLAHSWMEECEQVA 307
+L+VD + R ++ H W + +A
Sbjct: 272 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 305
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 144/274 (52%), Gaps = 16/274 (5%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D++ K LG G FG + TG A K + K ++V ++ + E I+ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN- 99
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
P +V L+ +++ ++++ME GGE+F L + GRF E AR ++ Y H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE-VLAGG 218
+++RDLKPEN+++ + IK+ DFG A +K G+P Y+APE +L+ G
Sbjct: 160 LDLIYRDLKPENLMIDQQGY---IKVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 214
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
YN+A D W+ GV++Y + +G PPF+ +I++ + + +RFPS H S+ +DL+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 270
Query: 279 GMLRVDPSTRL-----TAAEVLAHSWMEECEQVA 307
+L+VD + R ++ H W + +A
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 144/274 (52%), Gaps = 16/274 (5%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D++ K LG G FG + TG A K + K ++V ++ + E I+ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN- 99
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
P +V L+ +++ ++++ME GGE+F L + GRF E AR ++ Y H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE-VLAGG 218
+++RDLKPEN+L+ + I++ DFG A +K G+P Y+APE +L+ G
Sbjct: 160 LDLIYRDLKPENLLIDQQGY---IQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 214
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
YN+A D W+ GV++Y + +G PPF+ +I++ + + +RFPS H S+ +DL+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 270
Query: 279 GMLRVDPSTRL-----TAAEVLAHSWMEECEQVA 307
+L+VD + R ++ H W + +A
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 144/274 (52%), Gaps = 16/274 (5%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D++ K LG G FG + TG A K + K ++V ++ + E I+ ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN- 99
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
P +V L+ +++ ++++ME GGE+F L + GRF E AR ++ Y H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE-VLAGG 218
+++RDLKPEN+L+ + I++ DFG A +K G+P Y+APE +L+ G
Sbjct: 160 LDLIYRDLKPENLLIDQQGY---IQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 214
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
YN+A D W+ GV++Y + +G PPF+ +I++ + + +RFPS H S+ +DL+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 270
Query: 279 GMLRVDPSTRL-----TAAEVLAHSWMEECEQVA 307
+L+VD + R ++ H W + +A
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 144/274 (52%), Gaps = 16/274 (5%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D++ K LG G FG + TG A K + K ++V ++ + E I+ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN- 100
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
P +V L+ +++ ++++ME GGE+F L + GRF E AR ++ Y H
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 160
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE-VLAGG 218
+++RDLKPEN+L+ + I++ DFG A +K G+P Y+APE +L+ G
Sbjct: 161 LDLIYRDLKPENLLIDQQGY---IQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 215
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
YN+A D W+ GV++Y + +G PPF+ +I++ + + +RFPS H S+ +DL+
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 271
Query: 279 GMLRVDPSTRL-----TAAEVLAHSWMEECEQVA 307
+L+VD + R ++ H W + +A
Sbjct: 272 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 305
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 88/261 (33%), Positives = 138/261 (52%), Gaps = 11/261 (4%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
Y++ + LG G FG ++ + T + +A K I++ L + ++ EI + KL HP
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYL-KLLRHP 69
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
+++ L V + +++E AGGELF + + R +E E R F+ ++ + YCH +
Sbjct: 70 HIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHK 128
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAGGY-- 219
+VHRDLKPEN+LL + +K+ADFGL+ + G L + GSP Y APEV+ G
Sbjct: 129 IVHRDLKPENLLL---DDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYA 185
Query: 220 NQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMG 279
DVWS G++LY++L G PF + +F V + P D +S A+ LI
Sbjct: 186 GPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMP----DFLSPGAQSLIRR 241
Query: 280 MLRVDPSTRLTAAEVLAHSWM 300
M+ DP R+T E+ W
Sbjct: 242 MIVADPMQRITIQEIRRDPWF 262
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 145 bits (365), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 142/264 (53%), Gaps = 14/264 (5%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D + +G+ LG G+FG + +K + ++A K + K ++ ++ EIEI L
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLH- 81
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
HPN++ L + + ++L++E GEL+ L+K F E I L + YCHG
Sbjct: 82 HPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHG 141
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKA--GQNLHGTVGSPFYIAPEVLAG 217
V+HRD+KPEN+LL K +ADFG + + + + + GT+ Y+ PE++ G
Sbjct: 142 KKVIHRDIKPENLLLGLKGELK---IADFGWSVHAPSLRRKTMCGTLD---YLPPEMIEG 195
Query: 218 G-YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDL 276
+N+ D+W GV+ Y LL G PPF + ++ + + DL+FP+ + A+DL
Sbjct: 196 RMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPAS----VPTGAQDL 251
Query: 277 IMGMLRVDPSTRLTAAEVLAHSWM 300
I +LR +PS RL A+V AH W+
Sbjct: 252 ISKLLRHNPSERLPLAQVSAHPWV 275
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 145 bits (365), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 143/274 (52%), Gaps = 16/274 (5%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D++ K LG G FG + TG A K + K ++V ++ + E I+ ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN- 100
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
P + L+ +++ ++++ME GGE+F L + GRF E AR ++ Y H
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 160
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE-VLAGG 218
+++RDLKPEN+++ + IK+ DFG A +K G+P Y+APE +L+ G
Sbjct: 161 LDLIYRDLKPENLMIDQQGY---IKVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKG 215
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
YN+A D W+ GV++Y + +G PPF+ +I++ + + +RFPS H S+ +DL+
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLR 271
Query: 279 GMLRVDPSTRL-----TAAEVLAHSWMEECEQVA 307
+L+VD + R ++ H W + +A
Sbjct: 272 NLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 305
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 141 bits (355), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 150/280 (53%), Gaps = 13/280 (4%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKL 97
L ++Y++ + LG G+FG++ C + + + K + V D +K EI I+ +
Sbjct: 3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVK----VKGTDQVLVKKEISILN-I 57
Query: 98 SGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQV---V 154
+ H N++ L +E + + ++ E +G ++F R+ E R I ++ QV +
Sbjct: 58 ARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSA--FELNEREIVSYVHQVCEAL 115
Query: 155 SYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEV 214
+ H + + H D++PENI+ T+ SS+ IK+ +FG A +K G N +P Y APEV
Sbjct: 116 QFLHSHNIGHFDIRPENIIYQTRRSST-IKIIEFGQARQLKPGDNFRLLFTAPEYYAPEV 174
Query: 215 LAGGY-NQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASA 273
+ A D+WS G ++Y+LLSG+ PF +T +I + + A+ F + + IS A
Sbjct: 175 HQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEA 234
Query: 274 RDLIMGMLRVDPSTRLTAAEVLAHSWM-EECEQVAQKPCK 312
D + +L + +R+TA+E L H W+ ++ E+V+ K +
Sbjct: 235 MDFVDRLLVKERKSRMTASEALQHPWLKQKIERVSTKVIR 274
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 135/283 (47%), Gaps = 38/283 (13%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKL 97
+ D V + LG G G + + +K T E A K ++D + E+E+ +
Sbjct: 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALK--------MLQDCPKARREVELHWRA 67
Query: 98 SGHPNVVDLKAVYEE----EDYVHLLMELCAGGELFHRLEKYG--RFSETEARVIFRHLM 151
S P++V + VYE + ++ME GGELF R++ G F+E EA I + +
Sbjct: 68 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 127
Query: 152 QVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIA 211
+ + Y H + HRD+KPEN+L +K ++ +KL DFG A
Sbjct: 128 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK------------------- 168
Query: 212 PEVLAGGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDA----VRAADLRFPSDPWD 267
E Y+++ D+WS GVI+YILL G PPF+ I +R FP+ W
Sbjct: 169 -ETTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWS 227
Query: 268 HISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKP 310
+S + LI +L+ +P+ R+T E + H W+ + +V Q P
Sbjct: 228 EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTP 270
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/250 (35%), Positives = 128/250 (51%), Gaps = 10/250 (4%)
Query: 48 LGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLK 107
LG G F E SD T EV A K + K L+ + +EI I L+ H +VV
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQHVVGFH 83
Query: 108 AVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHRDL 167
+E+ D+V +++ELC L ++ +E EAR R ++ Y H N V+HRDL
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 143
Query: 168 KPENILLATKSSSSPIKLADFGLATYIKA-GQNLHGTVGSPFYIAPEVLA-GGYNQAADV 225
K N+ L + +K+ DFGLAT ++ G+ G+P YIAPEVL+ G++ DV
Sbjct: 144 KLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDV 200
Query: 226 WSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVDP 285
WS G I+Y LL G PPF + + ++ + P HI+ A LI ML+ DP
Sbjct: 201 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINPVAASLIQKMLQTDP 256
Query: 286 STRLTAAEVL 295
+ R T E+L
Sbjct: 257 TARPTINELL 266
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/250 (35%), Positives = 128/250 (51%), Gaps = 10/250 (4%)
Query: 48 LGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLK 107
LG G F E SD T EV A K + K L+ + +EI I L+ H +VV
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQHVVGFH 83
Query: 108 AVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHRDL 167
+E+ D+V +++ELC L ++ +E EAR R ++ Y H N V+HRDL
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 143
Query: 168 KPENILLATKSSSSPIKLADFGLATYIKA-GQNLHGTVGSPFYIAPEVLA-GGYNQAADV 225
K N+ L + +K+ DFGLAT ++ G+ G+P YIAPEVL+ G++ DV
Sbjct: 144 KLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDV 200
Query: 226 WSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVDP 285
WS G I+Y LL G PPF + + ++ + P HI+ A LI ML+ DP
Sbjct: 201 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINPVAASLIQKMLQTDP 256
Query: 286 STRLTAAEVL 295
+ R T E+L
Sbjct: 257 TARPTINELL 266
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/250 (35%), Positives = 128/250 (51%), Gaps = 10/250 (4%)
Query: 48 LGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLK 107
LG G F E SD T EV A K + K L+ + +EI I L+ H +VV
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQHVVGFH 87
Query: 108 AVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHRDL 167
+E+ D+V +++ELC L ++ +E EAR R ++ Y H N V+HRDL
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 147
Query: 168 KPENILLATKSSSSPIKLADFGLATYIKA-GQNLHGTVGSPFYIAPEVLA-GGYNQAADV 225
K N+ L + +K+ DFGLAT ++ G+ G+P YIAPEVL+ G++ DV
Sbjct: 148 KLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDV 204
Query: 226 WSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVDP 285
WS G I+Y LL G PPF + + ++ + P HI+ A LI ML+ DP
Sbjct: 205 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINPVAASLIQKMLQTDP 260
Query: 286 STRLTAAEVL 295
+ R T E+L
Sbjct: 261 TARPTINELL 270
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 89/255 (34%), Positives = 129/255 (50%), Gaps = 10/255 (3%)
Query: 48 LGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLK 107
LG G F E SD T EV A K + K L+ + +EI I L+ H +VV
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQHVVGFH 105
Query: 108 AVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHRDL 167
+E+ D+V +++ELC L ++ +E EAR R ++ Y H N V+HRDL
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 165
Query: 168 KPENILLATKSSSSPIKLADFGLATYIKA-GQNLHGTVGSPFYIAPEVLA-GGYNQAADV 225
K N+ L + +K+ DFGLAT ++ G+ G+P YIAPEVL+ G++ DV
Sbjct: 166 KLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDV 222
Query: 226 WSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVDP 285
WS G I+Y LL G PPF + + ++ + P HI+ A LI ML+ DP
Sbjct: 223 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINPVAASLIQKMLQTDP 278
Query: 286 STRLTAAEVLAHSWM 300
+ R T E+L +
Sbjct: 279 TARPTINELLNDEFF 293
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 89/255 (34%), Positives = 129/255 (50%), Gaps = 10/255 (3%)
Query: 48 LGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLK 107
LG G F E SD T EV A K + K L+ + +EI I L+ H +VV
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQHVVGFH 107
Query: 108 AVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHRDL 167
+E+ D+V +++ELC L ++ +E EAR R ++ Y H N V+HRDL
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 167
Query: 168 KPENILLATKSSSSPIKLADFGLATYIKA-GQNLHGTVGSPFYIAPEVLA-GGYNQAADV 225
K N+ L + +K+ DFGLAT ++ G+ G+P YIAPEVL+ G++ DV
Sbjct: 168 KLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDV 224
Query: 226 WSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVDP 285
WS G I+Y LL G PPF + + ++ + P HI+ A LI ML+ DP
Sbjct: 225 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINPVAASLIQKMLQTDP 280
Query: 286 STRLTAAEVLAHSWM 300
+ R T E+L +
Sbjct: 281 TARPTINELLNDEFF 295
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 89/250 (35%), Positives = 128/250 (51%), Gaps = 10/250 (4%)
Query: 48 LGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLK 107
LG G F E SD T EV A K + K L+ + +EI I L+ H +VV
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQHVVGFH 81
Query: 108 AVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHRDL 167
+E+ D+V +++ELC L ++ +E EAR R ++ Y H N V+HRDL
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 141
Query: 168 KPENILLATKSSSSPIKLADFGLATYIKA-GQNLHGTVGSPFYIAPEVLA-GGYNQAADV 225
K N+ L + +K+ DFGLAT ++ G+ G+P YIAPEVL+ G++ DV
Sbjct: 142 KLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDV 198
Query: 226 WSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVDP 285
WS G I+Y LL G PPF + + ++ + P HI+ A LI ML+ DP
Sbjct: 199 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINPVAASLIQKMLQTDP 254
Query: 286 STRLTAAEVL 295
+ R T E+L
Sbjct: 255 TARPTINELL 264
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 133/262 (50%), Gaps = 15/262 (5%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVD 105
K LG G FG + +K TG A K + K+ ++ ++V E ++ + HP +
Sbjct: 14 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTA 72
Query: 106 LKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHR 165
LK ++ D + +ME GGELF L + F+E AR ++ + Y H VV+R
Sbjct: 73 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR 132
Query: 166 DLKPENILLATKSSSSPIKLADFGLATY-IKAGQNLHGTVGSPFYIAPEVLA-GGYNQAA 223
D+K EN++L IK+ DFGL I G + G+P Y+APEVL Y +A
Sbjct: 133 DIKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAV 189
Query: 224 DVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRV 283
D W GV++Y ++ G PF+ + ++F+ + ++RFP +S A+ L+ G+L+
Sbjct: 190 DWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT----LSPEAKSLLAGLLKK 245
Query: 284 DPSTRL-----TAAEVLAHSWM 300
DP RL A EV+ H +
Sbjct: 246 DPKQRLGGGPSDAKEVMEHRFF 267
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 138 bits (347), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 133/262 (50%), Gaps = 15/262 (5%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVD 105
K LG G FG + +K TG A K + K+ ++ ++V E ++ + HP +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTA 69
Query: 106 LKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHR 165
LK ++ D + +ME GGELF L + F+E AR ++ + Y H VV+R
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR 129
Query: 166 DLKPENILLATKSSSSPIKLADFGLATY-IKAGQNLHGTVGSPFYIAPEVLA-GGYNQAA 223
D+K EN++L IK+ DFGL I G + G+P Y+APEVL Y +A
Sbjct: 130 DIKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAV 186
Query: 224 DVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRV 283
D W GV++Y ++ G PF+ + ++F+ + ++RFP +S A+ L+ G+L+
Sbjct: 187 DWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT----LSPEAKSLLAGLLKK 242
Query: 284 DPSTRL-----TAAEVLAHSWM 300
DP RL A EV+ H +
Sbjct: 243 DPKQRLGGGPSDAKEVMEHRFF 264
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 138 bits (347), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 133/262 (50%), Gaps = 15/262 (5%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVD 105
K LG G FG + +K TG A K + K+ ++ ++V E ++ + HP +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTA 69
Query: 106 LKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHR 165
LK ++ D + +ME GGELF L + F+E AR ++ + Y H VV+R
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR 129
Query: 166 DLKPENILLATKSSSSPIKLADFGLATY-IKAGQNLHGTVGSPFYIAPEVLA-GGYNQAA 223
D+K EN++L IK+ DFGL I G + G+P Y+APEVL Y +A
Sbjct: 130 DIKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAV 186
Query: 224 DVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRV 283
D W GV++Y ++ G PF+ + ++F+ + ++RFP +S A+ L+ G+L+
Sbjct: 187 DWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT----LSPEAKSLLAGLLKK 242
Query: 284 DPSTRL-----TAAEVLAHSWM 300
DP RL A EV+ H +
Sbjct: 243 DPKQRLGGGPSDAKEVMEHRFF 264
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 138 bits (347), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 133/262 (50%), Gaps = 15/262 (5%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVD 105
K LG G FG + +K TG A K + K+ ++ ++V E ++ + HP +
Sbjct: 16 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTA 74
Query: 106 LKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHR 165
LK ++ D + +ME GGELF L + F+E AR ++ + Y H VV+R
Sbjct: 75 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR 134
Query: 166 DLKPENILLATKSSSSPIKLADFGLATY-IKAGQNLHGTVGSPFYIAPEVLA-GGYNQAA 223
D+K EN++L IK+ DFGL I G + G+P Y+APEVL Y +A
Sbjct: 135 DIKLENLML---DKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAV 191
Query: 224 DVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRV 283
D W GV++Y ++ G PF+ + ++F+ + ++RFP +S A+ L+ G+L+
Sbjct: 192 DWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT----LSPEAKSLLAGLLKK 247
Query: 284 DPSTRL-----TAAEVLAHSWM 300
DP RL A EV+ H +
Sbjct: 248 DPKQRLGGGPSDAKEVMEHRFF 269
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 138 bits (347), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 133/262 (50%), Gaps = 15/262 (5%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVD 105
K LG G FG + +K TG A K + K+ ++ ++V E ++ + HP +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTA 69
Query: 106 LKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHR 165
LK ++ D + +ME GGELF L + F+E AR ++ + Y H VV+R
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR 129
Query: 166 DLKPENILLATKSSSSPIKLADFGLATY-IKAGQNLHGTVGSPFYIAPEVLA-GGYNQAA 223
D+K EN++L IK+ DFGL I G + G+P Y+APEVL Y +A
Sbjct: 130 DIKLENLML---DKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAV 186
Query: 224 DVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRV 283
D W GV++Y ++ G PF+ + ++F+ + ++RFP +S A+ L+ G+L+
Sbjct: 187 DWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT----LSPEAKSLLAGLLKK 242
Query: 284 DPSTRL-----TAAEVLAHSWM 300
DP RL A EV+ H +
Sbjct: 243 DPKQRLGGGPSDAKEVMEHRFF 264
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 138 bits (347), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 133/262 (50%), Gaps = 15/262 (5%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVD 105
K LG G FG + +K TG A K + K+ ++ ++V E ++ + HP +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTA 69
Query: 106 LKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHR 165
LK ++ D + +ME GGELF L + F+E AR ++ + Y H VV+R
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR 129
Query: 166 DLKPENILLATKSSSSPIKLADFGLATY-IKAGQNLHGTVGSPFYIAPEVLA-GGYNQAA 223
D+K EN++L IK+ DFGL I G + G+P Y+APEVL Y +A
Sbjct: 130 DIKLENLML---DKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAV 186
Query: 224 DVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRV 283
D W GV++Y ++ G PF+ + ++F+ + ++RFP +S A+ L+ G+L+
Sbjct: 187 DWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT----LSPEAKSLLAGLLKK 242
Query: 284 DPSTRL-----TAAEVLAHSWM 300
DP RL A EV+ H +
Sbjct: 243 DPKQRLGGGPSDAKEVMEHRFF 264
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 137 bits (346), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 133/262 (50%), Gaps = 15/262 (5%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVD 105
K LG G FG + +K TG A K + K+ ++ ++V E ++ + HP +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTA 69
Query: 106 LKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHR 165
LK ++ D + +ME GGELF L + F+E AR ++ + Y H VV+R
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR 129
Query: 166 DLKPENILLATKSSSSPIKLADFGLATY-IKAGQNLHGTVGSPFYIAPEVLA-GGYNQAA 223
D+K EN++L IK+ DFGL I G + G+P Y+APEVL Y +A
Sbjct: 130 DIKLENLML---DKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAV 186
Query: 224 DVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRV 283
D W GV++Y ++ G PF+ + ++F+ + ++RFP +S A+ L+ G+L+
Sbjct: 187 DWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT----LSPEAKSLLAGLLKK 242
Query: 284 DPSTRL-----TAAEVLAHSWM 300
DP RL A EV+ H +
Sbjct: 243 DPKQRLGGGPSDAKEVMEHRFF 264
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 137 bits (346), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 133/263 (50%), Gaps = 16/263 (6%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVD 105
K LG G FG + +K TG A K + K+ +V ++V E ++ S HP +
Sbjct: 14 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTA 72
Query: 106 LKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG-NGVVH 164
LK ++ D + +ME GGELF L + FSE AR ++ + Y H VV+
Sbjct: 73 LKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVY 132
Query: 165 RDLKPENILLATKSSSSPIKLADFGLATY-IKAGQNLHGTVGSPFYIAPEVLAGG-YNQA 222
RDLK EN++L IK+ DFGL IK G + G+P Y+APEVL Y +A
Sbjct: 133 RDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRA 189
Query: 223 ADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLR 282
D W GV++Y ++ G PF+ + K+F+ + ++RFP + A+ L+ G+L+
Sbjct: 190 VDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT----LGPEAKSLLSGLLK 245
Query: 283 VDPSTRL-----TAAEVLAHSWM 300
DP RL A E++ H +
Sbjct: 246 KDPKQRLGGGSEDAKEIMQHRFF 268
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 137 bits (346), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 133/263 (50%), Gaps = 16/263 (6%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVD 105
K LG G FG + +K TG A K + K+ +V ++V E ++ S HP +
Sbjct: 15 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTA 73
Query: 106 LKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG-NGVVH 164
LK ++ D + +ME GGELF L + FSE AR ++ + Y H VV+
Sbjct: 74 LKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVY 133
Query: 165 RDLKPENILLATKSSSSPIKLADFGLATY-IKAGQNLHGTVGSPFYIAPEVLAGG-YNQA 222
RDLK EN++L IK+ DFGL IK G + G+P Y+APEVL Y +A
Sbjct: 134 RDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRA 190
Query: 223 ADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLR 282
D W GV++Y ++ G PF+ + K+F+ + ++RFP + A+ L+ G+L+
Sbjct: 191 VDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT----LGPEAKSLLSGLLK 246
Query: 283 VDPSTRL-----TAAEVLAHSWM 300
DP RL A E++ H +
Sbjct: 247 KDPKQRLGGGSEDAKEIMQHRFF 269
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 137 bits (346), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 133/263 (50%), Gaps = 16/263 (6%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVD 105
K LG G FG + +K TG A K + K+ +V ++V E ++ S HP +
Sbjct: 16 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTA 74
Query: 106 LKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG-NGVVH 164
LK ++ D + +ME GGELF L + FSE AR ++ + Y H VV+
Sbjct: 75 LKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVY 134
Query: 165 RDLKPENILLATKSSSSPIKLADFGLATY-IKAGQNLHGTVGSPFYIAPEVLAGG-YNQA 222
RDLK EN++L IK+ DFGL IK G + G+P Y+APEVL Y +A
Sbjct: 135 RDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRA 191
Query: 223 ADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLR 282
D W GV++Y ++ G PF+ + K+F+ + ++RFP + A+ L+ G+L+
Sbjct: 192 VDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT----LGPEAKSLLSGLLK 247
Query: 283 VDPSTRL-----TAAEVLAHSWM 300
DP RL A E++ H +
Sbjct: 248 KDPKQRLGGGSEDAKEIMQHRFF 270
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 133/263 (50%), Gaps = 16/263 (6%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVD 105
K LG G FG + +K TG A K + K+ +V ++V E ++ S HP +
Sbjct: 154 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTA 212
Query: 106 LKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG-NGVVH 164
LK ++ D + +ME GGELF L + FSE AR ++ + Y H VV+
Sbjct: 213 LKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVY 272
Query: 165 RDLKPENILLATKSSSSPIKLADFGLATY-IKAGQNLHGTVGSPFYIAPEVLAGG-YNQA 222
RDLK EN++L IK+ DFGL IK G + G+P Y+APEVL Y +A
Sbjct: 273 RDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRA 329
Query: 223 ADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLR 282
D W GV++Y ++ G PF+ + K+F+ + ++RFP + A+ L+ G+L+
Sbjct: 330 VDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT----LGPEAKSLLSGLLK 385
Query: 283 VDPSTRL-----TAAEVLAHSWM 300
DP RL A E++ H +
Sbjct: 386 KDPKQRLGGGSEDAKEIMQHRFF 408
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 133/263 (50%), Gaps = 16/263 (6%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVD 105
K LG G FG + +K TG A K + K+ +V ++V E ++ S HP +
Sbjct: 157 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTA 215
Query: 106 LKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG-NGVVH 164
LK ++ D + +ME GGELF L + FSE AR ++ + Y H VV+
Sbjct: 216 LKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVY 275
Query: 165 RDLKPENILLATKSSSSPIKLADFGLATY-IKAGQNLHGTVGSPFYIAPEVLAGG-YNQA 222
RDLK EN++L IK+ DFGL IK G + G+P Y+APEVL Y +A
Sbjct: 276 RDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRA 332
Query: 223 ADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLR 282
D W GV++Y ++ G PF+ + K+F+ + ++RFP + A+ L+ G+L+
Sbjct: 333 VDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT----LGPEAKSLLSGLLK 388
Query: 283 VDPSTRL-----TAAEVLAHSWM 300
DP RL A E++ H +
Sbjct: 389 KDPKQRLGGGSEDAKEIMQHRFF 411
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 137/273 (50%), Gaps = 17/273 (6%)
Query: 37 NLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTK 96
+L D +L + LG G FG + + G A K + K+ +V ++ V E +M
Sbjct: 4 SLQDFQIL-RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDE-RLMLS 61
Query: 97 LSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSY 156
+ HP ++ + +++ + ++M+ GGELF L K RF A+ + + Y
Sbjct: 62 IVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEY 121
Query: 157 CHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLA 216
H +++RDLKPENILL + IK+ DFG A Y+ + G+P YIAPEV++
Sbjct: 122 LHSKDIIYRDLKPENILL---DKNGHIKITDFGFAKYVP--DVTYXLCGTPDYIAPEVVS 176
Query: 217 -GGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARD 275
YN++ D WS G+++Y +L+G PF+ K ++ + A+LRFP + +D
Sbjct: 177 TKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPP----FFNEDVKD 232
Query: 276 LIMGMLRVDPSTRL-----TAAEVLAHSWMEEC 303
L+ ++ D S RL +V H W +E
Sbjct: 233 LLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEV 265
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 142/273 (52%), Gaps = 13/273 (4%)
Query: 44 LGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNV 103
L + LG G +G ++ ++ T E +A K + R V + +IK EI I K+ H NV
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEIXI-NKMLNHENV 66
Query: 104 VDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVV 163
V E + +L +E C+GGELF R+E E +A+ F LM V Y HG G+
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 164 HRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN---LHGTVGSPFYIAPEVLAGG-- 218
HRD+KPEN+LL + + +K++DFGLAT + L+ G+ Y+APE+L
Sbjct: 127 HRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
+ + DVWS G++L +L+G P W + + + + +PW I ++ L+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH 242
Query: 279 GMLRVDPSTRLTAAEVLAHSWMEE-CEQVAQKP 310
+L +PS R+T ++ W + ++ A++P
Sbjct: 243 KILVENPSARITIPDIKKDRWYNKPLKKGAKRP 275
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 159/315 (50%), Gaps = 27/315 (8%)
Query: 30 LDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKL 89
LD ++++ + VLGK G FG + K T E+ A K + KD ++ +DV +
Sbjct: 13 LDRVKLTDFNFLMVLGK----GSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMV 68
Query: 90 EIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRH 149
E ++ L P + L + ++ D ++ +ME GG+L + +++ G+F E +A
Sbjct: 69 EKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAE 128
Query: 150 LMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLAT-YIKAGQNLHGTVGSPF 208
+ + + H G+++RDLK +N++L S IK+ADFG+ ++ G G+P
Sbjct: 129 ISIGLFFLHKRGIIYRDLKLDNVML---DSEGHIKIADFGMCKEHMMDGVTTREFCGTPD 185
Query: 209 YIAPEVLA-GGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWD 267
YIAPE++A Y ++ D W+ GV+LY +L+G PPF G+ + ++F ++ ++ +P
Sbjct: 186 YIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKS--- 242
Query: 268 HISASARDLIMGMLRVDPSTRLTAA-----EVLAHSWM-----EECEQVAQKPCKQDDLC 317
+S A + G++ P+ RL +V H++ E+ E +P + +C
Sbjct: 243 -LSKEAVSICKGLMTKHPAKRLGCGPEGERDVREHAFFRRIDWEKLENREIQPPFKPKVC 301
Query: 318 CKQLEVGGSSFSATF 332
K G +F F
Sbjct: 302 GK----GAENFDKFF 312
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 142/273 (52%), Gaps = 13/273 (4%)
Query: 44 LGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNV 103
L + LG G +G ++ ++ T E +A K + R V + +IK EI I K+ H NV
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEIXI-NKMLNHENV 66
Query: 104 VDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVV 163
V E + +L +E C+GGELF R+E E +A+ F LM V Y HG G+
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 164 HRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN---LHGTVGSPFYIAPEVLAGG-- 218
HRD+KPEN+LL + + +K++DFGLAT + L+ G+ Y+APE+L
Sbjct: 127 HRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
+ + DVWS G++L +L+G P W + + + + +PW I ++ L+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH 242
Query: 279 GMLRVDPSTRLTAAEVLAHSWMEE-CEQVAQKP 310
+L +PS R+T ++ W + ++ A++P
Sbjct: 243 KILVENPSARITIPDIKKDRWYNKPLKKGAKRP 275
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 142/273 (52%), Gaps = 13/273 (4%)
Query: 44 LGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNV 103
L + LG G +G ++ ++ T E +A K + R V + +IK EI I K+ H NV
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEIXI-NKMLNHENV 67
Query: 104 VDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVV 163
V E + +L +E C+GGELF R+E E +A+ F LM V Y HG G+
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 164 HRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN---LHGTVGSPFYIAPEVLAGG-- 218
HRD+KPEN+LL + + +K++DFGLAT + L+ G+ Y+APE+L
Sbjct: 128 HRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 184
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
+ + DVWS G++L +L+G P W + + + + +PW I ++ L+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH 243
Query: 279 GMLRVDPSTRLTAAEVLAHSWMEE-CEQVAQKP 310
+L +PS R+T ++ W + ++ A++P
Sbjct: 244 KILVENPSARITIPDIKKDRWYNKPLKKGAKRP 276
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 131 bits (330), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 153/300 (51%), Gaps = 22/300 (7%)
Query: 44 LGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNV 103
L + LG G +G ++ ++ T E +A K + R V + +IK EI + K+ H NV
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEI-CINKMLNHENV 66
Query: 104 VDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVV 163
V E + +L +E C+GGELF R+E E +A+ F LM V Y HG G+
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 164 HRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN---LHGTVGSPFYIAPEVLAGG-- 218
HRD+KPEN+LL + + +K++DFGLAT + L+ G+ Y+APE+L
Sbjct: 127 HRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
+ + DVWS G++L +L+G P W + + + + +PW I ++ L+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH 242
Query: 279 GMLRVDPSTRLTAAEVLAHSWMEE-CEQVAQKPCKQDDLCCKQLEVGGSSFSATFISRNM 337
+L +PS R+T ++ W + ++ A++P ++ GG S S + S+++
Sbjct: 243 KILVENPSARITIPDIKKDRWYNKPLKKGAKRP---------RVTSGGVSESPSGFSKHI 293
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 131 bits (330), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 142/273 (52%), Gaps = 13/273 (4%)
Query: 44 LGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNV 103
L + LG G +G ++ ++ T E +A K + R V + +IK EI I K+ H NV
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICI-NKMLNHENV 66
Query: 104 VDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVV 163
V E + +L +E C+GGELF R+E E +A+ F LM V Y HG G+
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 164 HRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN---LHGTVGSPFYIAPEVLAGG-- 218
HRD+KPEN+LL + + +K++DFGLAT + L+ G+ Y+APE+L
Sbjct: 127 HRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
+ + DVWS G++L +L+G P W + + + + +PW I ++ L+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELP-WDQPSDSXQEYSDWKEKKTYLNPWKKIDSAPLALLH 242
Query: 279 GMLRVDPSTRLTAAEVLAHSWMEE-CEQVAQKP 310
+L +PS R+T ++ W + ++ A++P
Sbjct: 243 KILVENPSARITIPDIKKDRWYNKPLKKGAKRP 275
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 131 bits (329), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 153/300 (51%), Gaps = 22/300 (7%)
Query: 44 LGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNV 103
L + LG G +G ++ ++ T E +A K + R V + +IK EI I K+ H NV
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICI-NKMLNHENV 67
Query: 104 VDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVV 163
V E + +L +E C+GGELF R+E E +A+ F LM V Y HG G+
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 164 HRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN---LHGTVGSPFYIAPEVLAGG-- 218
HRD+KPEN+LL + + +K++DFGLAT + L+ G+ Y+APE+L
Sbjct: 128 HRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
+ + DVWS G++L +L+G P W + + + + +PW I ++ L+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH 243
Query: 279 GMLRVDPSTRLTAAEVLAHSWMEE-CEQVAQKPCKQDDLCCKQLEVGGSSFSATFISRNM 337
+L +PS R+T ++ W + ++ A++P ++ GG S S + S+++
Sbjct: 244 KILVENPSARITIPDIKKDRWYNKPLKKGAKRP---------RVTSGGVSESPSGFSKHI 294
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 135/261 (51%), Gaps = 12/261 (4%)
Query: 44 LGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNV 103
L + LG G +G ++ ++ T E +A K + R V + +IK EI I K+ H NV
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICI-NKMLNHENV 66
Query: 104 VDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVV 163
V E + +L +E C+GGELF R+E E +A+ F LM V Y HG G+
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 164 HRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN---LHGTVGSPFYIAPEVLAGG-- 218
HRD+KPEN+LL + + +K++DFGLAT + L+ G+ Y+APE+L
Sbjct: 127 HRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
+ + DVWS G++L +L+G P W + + + + +PW I ++ L+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH 242
Query: 279 GMLRVDPSTRLTAAEVLAHSW 299
+L +PS R+T ++ W
Sbjct: 243 KILVENPSARITIPDIKKDRW 263
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 142/273 (52%), Gaps = 13/273 (4%)
Query: 44 LGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNV 103
L + LG G +G ++ ++ T E +A K + R V + +IK EI I K+ H NV
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICI-NKMLNHENV 67
Query: 104 VDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVV 163
V E + +L +E C+GGELF R+E E +A+ F LM V Y HG G+
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 164 HRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN---LHGTVGSPFYIAPEVLAGG-- 218
HRD+KPEN+LL + + +K++DFGLAT + L+ G+ Y+APE+L
Sbjct: 128 HRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
+ + DVWS G++L +L+G P W + + + + +PW I ++ L+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH 243
Query: 279 GMLRVDPSTRLTAAEVLAHSWMEE-CEQVAQKP 310
+L +PS R+T ++ W + ++ A++P
Sbjct: 244 KILVENPSARITIPDIKKDRWYNKPLKKGAKRP 276
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 142/273 (52%), Gaps = 13/273 (4%)
Query: 44 LGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNV 103
L + LG G +G ++ ++ T E +A K + R V + +IK EI I K+ H NV
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICI-NKMLNHENV 67
Query: 104 VDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVV 163
V E + +L +E C+GGELF R+E E +A+ F LM V Y HG G+
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 164 HRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN---LHGTVGSPFYIAPEVLAGG-- 218
HRD+KPEN+LL + + +K++DFGLAT + L+ G+ Y+APE+L
Sbjct: 128 HRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
+ + DVWS G++L +L+G P W + + + + +PW I ++ L+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH 243
Query: 279 GMLRVDPSTRLTAAEVLAHSWMEE-CEQVAQKP 310
+L +PS R+T ++ W + ++ A++P
Sbjct: 244 KILVENPSARITIPDIKKDRWYNKPLKKGAKRP 276
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 142/273 (52%), Gaps = 13/273 (4%)
Query: 44 LGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNV 103
L + LG G +G ++ ++ T E +A K + R V + +IK EI I K+ H NV
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICI-NKMLNHENV 67
Query: 104 VDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVV 163
V E + +L +E C+GGELF R+E E +A+ F LM V Y HG G+
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 164 HRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN---LHGTVGSPFYIAPEVLAGG-- 218
HRD+KPEN+LL + + +K++DFGLAT + L+ G+ Y+APE+L
Sbjct: 128 HRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
+ + DVWS G++L +L+G P W + + + + +PW I ++ L+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH 243
Query: 279 GMLRVDPSTRLTAAEVLAHSWMEE-CEQVAQKP 310
+L +PS R+T ++ W + ++ A++P
Sbjct: 244 KILVENPSARITIPDIKKDRWYNKPLKKGAKRP 276
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 142/273 (52%), Gaps = 13/273 (4%)
Query: 44 LGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNV 103
L + LG G +G ++ ++ T E +A K + R V + +IK EI I K+ H NV
Sbjct: 9 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICI-NKMLNHENV 65
Query: 104 VDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVV 163
V E + +L +E C+GGELF R+E E +A+ F LM V Y HG G+
Sbjct: 66 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 125
Query: 164 HRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN---LHGTVGSPFYIAPEVLAGG-- 218
HRD+KPEN+LL + + +K++DFGLAT + L+ G+ Y+APE+L
Sbjct: 126 HRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 182
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
+ + DVWS G++L +L+G P W + + + + +PW I ++ L+
Sbjct: 183 HAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH 241
Query: 279 GMLRVDPSTRLTAAEVLAHSWMEE-CEQVAQKP 310
+L +PS R+T ++ W + ++ A++P
Sbjct: 242 KILVENPSARITIPDIKKDRWYNKPLKKGAKRP 274
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 142/273 (52%), Gaps = 13/273 (4%)
Query: 44 LGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNV 103
L + LG G +G ++ ++ T E +A K + R V + +IK EI I K+ H NV
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICI-NKMLNHENV 66
Query: 104 VDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVV 163
V E + +L +E C+GGELF R+E E +A+ F LM V Y HG G+
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 164 HRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN---LHGTVGSPFYIAPEVLAGG-- 218
HRD+KPEN+LL + + +K++DFGLAT + L+ G+ Y+APE+L
Sbjct: 127 HRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
+ + DVWS G++L +L+G P W + + + + +PW I ++ L+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH 242
Query: 279 GMLRVDPSTRLTAAEVLAHSWMEE-CEQVAQKP 310
+L +PS R+T ++ W + ++ A++P
Sbjct: 243 KILVENPSARITIPDIKKDRWYNKPLKKGAKRP 275
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 135/261 (51%), Gaps = 12/261 (4%)
Query: 44 LGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNV 103
L + LG G +G ++ ++ T E +A K + R V + +IK EI I K+ H NV
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICI-NKMLNHENV 67
Query: 104 VDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVV 163
V E + +L +E C+GGELF R+E E +A+ F LM V Y HG G+
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 164 HRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN---LHGTVGSPFYIAPEVLAGG-- 218
HRD+KPEN+LL + + +K++DFGLAT + L+ G+ Y+APE+L
Sbjct: 128 HRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
+ + DVWS G++L +L+G P W + + + + +PW I ++ L+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH 243
Query: 279 GMLRVDPSTRLTAAEVLAHSW 299
+L +PS R+T ++ W
Sbjct: 244 KILVENPSARITIPDIKKDRW 264
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 131 bits (329), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 142/273 (52%), Gaps = 13/273 (4%)
Query: 44 LGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNV 103
L + LG G +G ++ ++ T E +A K + R V + +IK EI I K+ H NV
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICI-NKMLNHENV 67
Query: 104 VDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVV 163
V E + +L +E C+GGELF R+E E +A+ F LM V Y HG G+
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 164 HRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN---LHGTVGSPFYIAPEVLAGG-- 218
HRD+KPEN+LL + + +K++DFGLAT + L+ G+ Y+APE+L
Sbjct: 128 HRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
+ + DVWS G++L +L+G P W + + + + +PW I ++ L+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH 243
Query: 279 GMLRVDPSTRLTAAEVLAHSWMEE-CEQVAQKP 310
+L +PS R+T ++ W + ++ A++P
Sbjct: 244 KILVENPSARITIPDIKKDRWYNKPLKKGAKRP 276
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 131 bits (329), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 135/261 (51%), Gaps = 12/261 (4%)
Query: 44 LGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNV 103
L + LG G +G ++ ++ T E +A K + R V + +IK EI I K+ H NV
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICI-NKMLNHENV 66
Query: 104 VDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVV 163
V E + +L +E C+GGELF R+E E +A+ F LM V Y HG G+
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 164 HRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN---LHGTVGSPFYIAPEVLAGG-- 218
HRD+KPEN+LL + + +K++DFGLAT + L+ G+ Y+APE+L
Sbjct: 127 HRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
+ + DVWS G++L +L+G P W + + + + +PW I ++ L+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH 242
Query: 279 GMLRVDPSTRLTAAEVLAHSW 299
+L +PS R+T ++ W
Sbjct: 243 KILVENPSARITIPDIKKDRW 263
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 131 bits (329), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 142/273 (52%), Gaps = 13/273 (4%)
Query: 44 LGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNV 103
L + LG G +G ++ ++ T E +A K + R V + +IK EI + K+ H NV
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEI-CINKMLNHENV 66
Query: 104 VDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVV 163
V E + +L +E C+GGELF R+E E +A+ F LM V Y HG G+
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 164 HRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN---LHGTVGSPFYIAPEVLAGG-- 218
HRD+KPEN+LL + + +K++DFGLAT + L+ G+ Y+APE+L
Sbjct: 127 HRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
+ + DVWS G++L +L+G P W + + + + +PW I ++ L+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH 242
Query: 279 GMLRVDPSTRLTAAEVLAHSWMEE-CEQVAQKP 310
+L +PS R+T ++ W + ++ A++P
Sbjct: 243 KILVENPSARITIPDIKKDRWYNKPLKKGAKRP 275
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 131 bits (329), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 135/261 (51%), Gaps = 12/261 (4%)
Query: 44 LGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNV 103
L + LG G +G ++ ++ T E +A K + R V + +IK EI I K+ H NV
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICI-NKMLNHENV 66
Query: 104 VDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVV 163
V E + +L +E C+GGELF R+E E +A+ F LM V Y HG G+
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 164 HRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN---LHGTVGSPFYIAPEVLAGG-- 218
HRD+KPEN+LL + + +K++DFGLAT + L+ G+ Y+APE+L
Sbjct: 127 HRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
+ + DVWS G++L +L+G P W + + + + +PW I ++ L+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH 242
Query: 279 GMLRVDPSTRLTAAEVLAHSW 299
+L +PS R+T ++ W
Sbjct: 243 KILVENPSARITIPDIKKDRW 263
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 130 bits (328), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 135/261 (51%), Gaps = 12/261 (4%)
Query: 44 LGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNV 103
L + LG G +G ++ ++ T E +A K + R V + +IK EI I K+ H NV
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICI-NKMLNHENV 66
Query: 104 VDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVV 163
V E + +L +E C+GGELF R+E E +A+ F LM V Y HG G+
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 164 HRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN---LHGTVGSPFYIAPEVLAGG-- 218
HRD+KPEN+LL + + +K++DFGLAT + L+ G+ Y+APE+L
Sbjct: 127 HRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
+ + DVWS G++L +L+G P W + + + + +PW I ++ L+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH 242
Query: 279 GMLRVDPSTRLTAAEVLAHSW 299
+L +PS R+T ++ W
Sbjct: 243 KILVENPSARITIPDIKKDRW 263
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 130 bits (328), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 135/261 (51%), Gaps = 12/261 (4%)
Query: 44 LGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNV 103
L + LG G +G ++ ++ T E +A K + R V + +IK EI I K+ H NV
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICI-NKMLNHENV 66
Query: 104 VDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVV 163
V E + +L +E C+GGELF R+E E +A+ F LM V Y HG G+
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 164 HRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN---LHGTVGSPFYIAPEVLAGG-- 218
HRD+KPEN+LL + + +K++DFGLAT + L+ G+ Y+APE+L
Sbjct: 127 HRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
+ + DVWS G++L +L+G P W + + + + +PW I ++ L+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH 242
Query: 279 GMLRVDPSTRLTAAEVLAHSW 299
+L +PS R+T ++ W
Sbjct: 243 KILVENPSARITIPDIKKDRW 263
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 142/285 (49%), Gaps = 14/285 (4%)
Query: 39 SDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLS 98
SD + L K +G G FG + K A K + K ++ ++ + I E ++ K
Sbjct: 38 SDFHFL-KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNV 96
Query: 99 GHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCH 158
HP +V L ++ D ++ +++ GGELF+ L++ F E AR + + Y H
Sbjct: 97 KHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLH 156
Query: 159 GNGVVHRDLKPENILLATKSSSSPIKLADFGL-ATYIKAGQNLHGTVGSPFYIAPEVL-A 216
+V+RDLKPENILL S I L DFGL I+ G+P Y+APEVL
Sbjct: 157 SLNIVYRDLKPENILL---DSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHK 213
Query: 217 GGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDL 276
Y++ D W G +LY +L G+PPF+ + ++++D + L+ + I+ SAR L
Sbjct: 214 QPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPN----ITNSARHL 269
Query: 277 IMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKPCKQDDLCCKQL 321
+ G+L+ D + RL A + +ME V DDL K++
Sbjct: 270 LEGLLQKDRTKRLGAKD----DFMEIKSHVFFSLINWDDLINKKI 310
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 149/305 (48%), Gaps = 47/305 (15%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKL 97
+ ++Y ++G G +GV+ +C ++ TG+++A K + V ++ I L M K
Sbjct: 1 MMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPV--IKKIALREIRMLKQ 58
Query: 98 SGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGR-FSETEARVIFRHLMQVVSY 156
HPN+V+L V+ + +HL+ E C + H L++Y R E + I +Q V++
Sbjct: 59 LKHPNLVNLLEVFRRKRRLHLVFEYC-DHTVLHELDRYQRGVPEHLVKSITWQTLQAVNF 117
Query: 157 CHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLH-GTVGSPFYIAPEVL 215
CH + +HRD+KPENIL+ + S IKL DFG A + + + V + +Y +PE+L
Sbjct: 118 CHKHNCIHRDVKPENILI---TKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELL 174
Query: 216 AGG--YNQAADVWSAGVILYILLSGMPPFWGK------------------------TKSK 249
G Y DVW+ G + LLSG+P + GK + ++
Sbjct: 175 VGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQ 234
Query: 250 IFDAVRAAD--------LRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAHSWME 301
F V+ D L+FP+ IS A L+ G L +DP+ RLT ++L H + E
Sbjct: 235 YFSGVKIPDPEDMEPLELKFPN-----ISYPALGLLKGCLHMDPTERLTCEQLLHHPYFE 289
Query: 302 ECEQV 306
++
Sbjct: 290 NIREI 294
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 140/274 (51%), Gaps = 10/274 (3%)
Query: 32 ATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEI 91
+ QI + ++L K LG G FG + K T + A K++ KD ++ +DV +E
Sbjct: 9 SLQIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEK 68
Query: 92 EIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLM 151
+++ HP + + ++ ++ + +ME GG+L + ++ +F + A ++
Sbjct: 69 RVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEII 128
Query: 152 QVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQ-NLHGTVGSPFYI 210
+ + H G+V+RDLK +NILL IK+ADFG+ G + G+P YI
Sbjct: 129 LGLQFLHSKGIVYRDLKLDNILL---DKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYI 185
Query: 211 APEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHI 269
APE+L G YN + D WS GV+LY +L G PF G+ + ++F ++R + +P W +
Sbjct: 186 APEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPR--W--L 241
Query: 270 SASARDLIMGMLRVDPSTRL-TAAEVLAHSWMEE 302
A+DL++ + +P RL ++ H E
Sbjct: 242 EKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFRE 275
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 135/261 (51%), Gaps = 12/261 (4%)
Query: 44 LGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNV 103
L + LG G +G ++ ++ T E +A K + R V + +IK EI I L+ H NV
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICINAMLN-HENV 67
Query: 104 VDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVV 163
V E + +L +E C+GGELF R+E E +A+ F LM V Y HG G+
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 164 HRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN---LHGTVGSPFYIAPEVLAGG-- 218
HRD+KPEN+LL + + +K++DFGLAT + L+ G+ Y+APE+L
Sbjct: 128 HRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
+ + DVWS G++L +L+G P W + + + + +PW I ++ L+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH 243
Query: 279 GMLRVDPSTRLTAAEVLAHSW 299
+L +PS R+T ++ W
Sbjct: 244 KILVENPSARITIPDIKKDRW 264
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 141/273 (51%), Gaps = 13/273 (4%)
Query: 44 LGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNV 103
L + LG G G ++ ++ T E +A K + R V + +IK EI I K+ H NV
Sbjct: 10 LVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE--NIKKEICI-NKMLNHENV 66
Query: 104 VDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVV 163
V E + +L +E C+GGELF R+E E +A+ F LM V Y HG G+
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 164 HRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN---LHGTVGSPFYIAPEVLAGG-- 218
HRD+KPEN+LL + + +K++DFGLAT + L+ G+ Y+APE+L
Sbjct: 127 HRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
+ + DVWS G++L +L+G P W + + + + +PW I ++ L+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH 242
Query: 279 GMLRVDPSTRLTAAEVLAHSWMEE-CEQVAQKP 310
+L +PS R+T ++ W + ++ A++P
Sbjct: 243 KILVENPSARITIPDIKKDRWYNKPLKKGAKRP 275
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 141/291 (48%), Gaps = 37/291 (12%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVE----------------- 82
++Y L ++G G +GV++ ++ A K ++K +L+
Sbjct: 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGG 72
Query: 83 ------DVRSIKLEIEIMTKLSGHPNVVDLKAVYEE--EDYVHLLMELCAGGELFHRLEK 134
+ + EI I+ KL HPNVV L V ++ ED+++++ EL G + +
Sbjct: 73 CIQPRGPIEQVYQEIAILKKLD-HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVM-EVPT 130
Query: 135 YGRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYI 194
SE +AR F+ L++ + Y H ++HRD+KP N+L+ IK+ADFG++
Sbjct: 131 LKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGH---IKIADFGVSNEF 187
Query: 195 KAGQN-LHGTVGSPFYIAPEVLAGGYN----QAADVWSAGVILYILLSGMPPFWGKTKSK 249
K L TVG+P ++APE L+ +A DVW+ GV LY + G PF +
Sbjct: 188 KGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMC 247
Query: 250 IFDAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAHSWM 300
+ +++ L FP P I+ +DLI ML +P +R+ E+ H W+
Sbjct: 248 LHSKIKSQALEFPDQP--DIAEDLKDLITRMLDKNPESRIVVPEIKLHPWV 296
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 145/270 (53%), Gaps = 19/270 (7%)
Query: 41 RYVLGKQLGWGQFG---VIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKL 97
++ L K LG G FG ++++ S ++ A K + K L + VR+ K+E +I+ ++
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT-KMERDILVEV 83
Query: 98 SGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYC 157
+ HP +V L ++ E ++L+++ GG+LF RL K F+E + + L + +
Sbjct: 84 N-HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHL 142
Query: 158 HGNGVVHRDLKPENILLATKSSSSPIKLADFGLAT-YIKAGQNLHGTVGSPFYIAPEVL- 215
H G+++RDLKPENILL IKL DFGL+ I + + G+ Y+APEV+
Sbjct: 143 HSLGIIYRDLKPENILL---DEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVN 199
Query: 216 AGGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARD 275
G+ Q+AD WS GV+++ +L+G PF GK + + + A L P +S A+
Sbjct: 200 RRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ----FLSPEAQS 255
Query: 276 LIMGMLRVDPSTRLTAA-----EVLAHSWM 300
L+ + + +P+ RL A E+ HS+
Sbjct: 256 LLRMLFKRNPANRLGAGPDGVEEIKRHSFF 285
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 145/270 (53%), Gaps = 19/270 (7%)
Query: 41 RYVLGKQLGWGQFG---VIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKL 97
++ L K LG G FG ++++ S ++ A K + K L + VR+ K+E +I+ ++
Sbjct: 26 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT-KMERDILVEV 84
Query: 98 SGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYC 157
+ HP +V L ++ E ++L+++ GG+LF RL K F+E + + L + +
Sbjct: 85 N-HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHL 143
Query: 158 HGNGVVHRDLKPENILLATKSSSSPIKLADFGLAT-YIKAGQNLHGTVGSPFYIAPEVL- 215
H G+++RDLKPENILL IKL DFGL+ I + + G+ Y+APEV+
Sbjct: 144 HSLGIIYRDLKPENILL---DEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVN 200
Query: 216 AGGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARD 275
G+ Q+AD WS GV+++ +L+G PF GK + + + A L P +S A+
Sbjct: 201 RRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ----FLSPEAQS 256
Query: 276 LIMGMLRVDPSTRLTAA-----EVLAHSWM 300
L+ + + +P+ RL A E+ HS+
Sbjct: 257 LLRMLFKRNPANRLGAGPDGVEEIKRHSFF 286
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 145/270 (53%), Gaps = 19/270 (7%)
Query: 41 RYVLGKQLGWGQFG---VIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKL 97
++ L K LG G FG ++++ S ++ A K + K L + VR+ K+E +I+ ++
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT-KMERDILVEV 83
Query: 98 SGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYC 157
+ HP +V L ++ E ++L+++ GG+LF RL K F+E + + L + +
Sbjct: 84 N-HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHL 142
Query: 158 HGNGVVHRDLKPENILLATKSSSSPIKLADFGLAT-YIKAGQNLHGTVGSPFYIAPEVL- 215
H G+++RDLKPENILL IKL DFGL+ I + + G+ Y+APEV+
Sbjct: 143 HSLGIIYRDLKPENILL---DEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVN 199
Query: 216 AGGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARD 275
G+ Q+AD WS GV+++ +L+G PF GK + + + A L P +S A+
Sbjct: 200 RRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ----FLSPEAQS 255
Query: 276 LIMGMLRVDPSTRLTAA-----EVLAHSWM 300
L+ + + +P+ RL A E+ HS+
Sbjct: 256 LLRMLFKRNPANRLGAGPDGVEEIKRHSFF 285
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 128 bits (321), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 136/273 (49%), Gaps = 15/273 (5%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D + + LG G FG + K TG++ A K + KD ++ +DV E I++
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN 82
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
HP + L ++ D + +ME GG+L ++K RF E AR ++ + + H
Sbjct: 83 HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHD 142
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATY-IKAGQNLHGTVGSPFYIAPEVLAGG 218
G+++RDLK +N+LL + KLADFG+ I G G+P YIAPE+L
Sbjct: 143 KGIIYRDLKLDNVLLDHEGHC---KLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEM 199
Query: 219 -YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLI 277
Y A D W+ GV+LY +L G PF + + +F+A+ ++ +P+ W H A+ ++
Sbjct: 200 LYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPT--WLHEDATG--IL 255
Query: 278 MGMLRVDPSTRLTAAE------VLAHSWMEECE 304
+ +P+ RL + +L H + +E +
Sbjct: 256 KSFMTKNPTMRLGSLTQGGEHAILRHPFFKEID 288
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 127 bits (320), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 139/274 (50%), Gaps = 10/274 (3%)
Query: 32 ATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEI 91
+ QI + + L K LG G FG + K T + A K++ KD ++ +DV +E
Sbjct: 10 SLQIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEK 69
Query: 92 EIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLM 151
+++ HP + + ++ ++ + +ME GG+L + ++ +F + A ++
Sbjct: 70 RVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEII 129
Query: 152 QVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQ-NLHGTVGSPFYI 210
+ + H G+V+RDLK +NILL IK+ADFG+ G + G+P YI
Sbjct: 130 LGLQFLHSKGIVYRDLKLDNILL---DKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYI 186
Query: 211 APEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHI 269
APE+L G YN + D WS GV+LY +L G PF G+ + ++F ++R + +P W +
Sbjct: 187 APEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPR--W--L 242
Query: 270 SASARDLIMGMLRVDPSTRL-TAAEVLAHSWMEE 302
A+DL++ + +P RL ++ H E
Sbjct: 243 EKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFRE 276
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 138/253 (54%), Gaps = 14/253 (5%)
Query: 42 YVLGKQLGWGQFG---VIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLS 98
+ L K LG G FG ++R+ + +G + A K + K L + VR+ K+E +I+ ++
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRT-KMERDILADVN 88
Query: 99 GHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCH 158
HP VV L ++ E ++L+++ GG+LF RL K F+E + + L + + H
Sbjct: 89 -HPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLH 147
Query: 159 GNGVVHRDLKPENILLATKSSSSPIKLADFGLAT-YIKAGQNLHGTVGSPFYIAPEVL-A 216
G+++RDLKPENILL IKL DFGL+ I + + G+ Y+APEV+
Sbjct: 148 SLGIIYRDLKPENILL---DEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNR 204
Query: 217 GGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDL 276
G++ +AD WS GV+++ +L+G PF GK + + + A L P +S A+ L
Sbjct: 205 QGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQ----FLSTEAQSL 260
Query: 277 IMGMLRVDPSTRL 289
+ + + +P+ RL
Sbjct: 261 LRALFKRNPANRL 273
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 128/257 (49%), Gaps = 12/257 (4%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ GK LG G F + + T A K + K ++ V + E ++M++L HP
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 89
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
V L +++++ ++ + GEL + K G F ET R ++ + Y HG G
Sbjct: 90 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 149
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN---LHGTVGSPFYIAPEVLAGG 218
++HRDLKPENILL + I++ DFG A + + VG+ Y++PE+L
Sbjct: 150 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 206
Query: 219 YN-QAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLI 277
+++D+W+ G I+Y L++G+PPF + IF + + FP + ARDL+
Sbjct: 207 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARDLV 262
Query: 278 MGMLRVDPSTRLTAAEV 294
+L +D + RL E+
Sbjct: 263 EKLLVLDATKRLGCEEM 279
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 128/257 (49%), Gaps = 12/257 (4%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ GK LG G F + + T A K + K ++ V + E ++M++L HP
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 90
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
V L +++++ ++ + GEL + K G F ET R ++ + Y HG G
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN---LHGTVGSPFYIAPEVLAGG 218
++HRDLKPENILL + I++ DFG A + + VG+ Y++PE+L
Sbjct: 151 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEK 207
Query: 219 YN-QAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLI 277
+++D+W+ G I+Y L++G+PPF + IF + + FP + ARDL+
Sbjct: 208 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARDLV 263
Query: 278 MGMLRVDPSTRLTAAEV 294
+L +D + RL E+
Sbjct: 264 EKLLVLDATKRLGCEEM 280
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 124 bits (311), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 128/257 (49%), Gaps = 12/257 (4%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ GK LG G F + + T A K + K ++ V + E ++M++L HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 92
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
V L +++++ ++ + GEL + K G F ET R ++ + Y HG G
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN---LHGTVGSPFYIAPEVLA-G 217
++HRDLKPENILL + I++ DFG A + + VG+ Y++PE+L
Sbjct: 153 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 218 GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLI 277
+++D+W+ G I+Y L++G+PPF + IF + + FP + ARDL+
Sbjct: 210 SAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFP----EKFFPKARDLV 265
Query: 278 MGMLRVDPSTRLTAAEV 294
+L +D + RL E+
Sbjct: 266 EKLLVLDATKRLGCEEM 282
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 128/257 (49%), Gaps = 12/257 (4%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ GK LG G F + + T A K + K ++ V + E ++M++L HP
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 89
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
V L +++++ ++ + GEL + K G F ET R ++ + Y HG G
Sbjct: 90 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 149
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN---LHGTVGSPFYIAPEVLAGG 218
++HRDLKPENILL + I++ DFG A + + VG+ Y++PE+L
Sbjct: 150 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 206
Query: 219 YN-QAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLI 277
+++D+W+ G I+Y L++G+PPF + IF + + FP + ARDL+
Sbjct: 207 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARDLV 262
Query: 278 MGMLRVDPSTRLTAAEV 294
+L +D + RL E+
Sbjct: 263 EKLLVLDATKRLGCEEM 279
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 132/270 (48%), Gaps = 18/270 (6%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ GK LG G F + + T A K + K ++ V + E ++M++L HP
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 93
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
V L +++++ ++ + GEL + K G F ET R ++ + Y HG G
Sbjct: 94 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 153
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN---LHGTVGSPFYIAPEVLAGG 218
++HRDLKPENILL + I++ DFG A + + VG+ Y++PE+L
Sbjct: 154 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 210
Query: 219 YN-QAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLI 277
+++D+W+ G I+Y L++G+PPF + IF + + FP + ARDL+
Sbjct: 211 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARDLV 266
Query: 278 MGMLRVDPSTRLTAAE------VLAHSWME 301
+L +D + RL E + AH + E
Sbjct: 267 EKLLVLDATKRLGCEEMEGYGPLKAHPFFE 296
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 132/270 (48%), Gaps = 18/270 (6%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ GK LG G F + + T A K + K ++ V + E ++M++L HP
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 68
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
V L +++++ ++ + GEL + K G F ET R ++ + Y HG G
Sbjct: 69 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 128
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN---LHGTVGSPFYIAPEVLAGG 218
++HRDLKPENILL + I++ DFG A + + VG+ Y++PE+L
Sbjct: 129 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 185
Query: 219 YN-QAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLI 277
+++D+W+ G I+Y L++G+PPF + IF + + FP + ARDL+
Sbjct: 186 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARDLV 241
Query: 278 MGMLRVDPSTRLTAAE------VLAHSWME 301
+L +D + RL E + AH + E
Sbjct: 242 EKLLVLDATKRLGCEEMEGYGPLKAHPFFE 271
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 132/270 (48%), Gaps = 18/270 (6%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ GK LG G F + + T A K + K ++ V + E ++M++L HP
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 67
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
V L +++++ ++ + GEL + K G F ET R ++ + Y HG G
Sbjct: 68 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 127
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN---LHGTVGSPFYIAPEVLAGG 218
++HRDLKPENILL + I++ DFG A + + VG+ Y++PE+L
Sbjct: 128 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 184
Query: 219 YN-QAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLI 277
+++D+W+ G I+Y L++G+PPF + IF + + FP + ARDL+
Sbjct: 185 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARDLV 240
Query: 278 MGMLRVDPSTRLTAAE------VLAHSWME 301
+L +D + RL E + AH + E
Sbjct: 241 EKLLVLDATKRLGCEEMEGYGPLKAHPFFE 270
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 128/257 (49%), Gaps = 12/257 (4%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ GK LG G F + + T A K + K ++ V + E ++M++L HP
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 90
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
V L +++++ ++ + GEL + K G F ET R ++ + Y HG G
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN---LHGTVGSPFYIAPEVLAGG 218
++HRDLKPENILL + I++ DFG A + + VG+ Y++PE+L
Sbjct: 151 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 219 YN-QAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLI 277
+++D+W+ G I+Y L++G+PPF + IF + + FP + ARDL+
Sbjct: 208 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARDLV 263
Query: 278 MGMLRVDPSTRLTAAEV 294
+L +D + RL E+
Sbjct: 264 EKLLVLDATKRLGCEEM 280
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 128/257 (49%), Gaps = 12/257 (4%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ GK LG G F + + T A K + K ++ V + E ++M++L HP
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 74
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
V L +++++ ++ + GEL + K G F ET R ++ + Y HG G
Sbjct: 75 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 134
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN---LHGTVGSPFYIAPEVLA-G 217
++HRDLKPENILL + I++ DFG A + + VG+ Y++PE+L
Sbjct: 135 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 191
Query: 218 GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLI 277
+++D+W+ G I+Y L++G+PPF + IF + + FP + ARDL+
Sbjct: 192 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARDLV 247
Query: 278 MGMLRVDPSTRLTAAEV 294
+L +D + RL E+
Sbjct: 248 EKLLVLDATKRLGCEEM 264
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 128/257 (49%), Gaps = 12/257 (4%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ GK LG G F + + T A K + K ++ V + E ++M++L HP
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 90
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
V L +++++ ++ + GEL + K G F ET R ++ + Y HG G
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN---LHGTVGSPFYIAPEVLAGG 218
++HRDLKPENILL + I++ DFG A + + VG+ Y++PE+L
Sbjct: 151 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 219 YN-QAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLI 277
+++D+W+ G I+Y L++G+PPF + IF + + FP + ARDL+
Sbjct: 208 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARDLV 263
Query: 278 MGMLRVDPSTRLTAAEV 294
+L +D + RL E+
Sbjct: 264 EKLLVLDATKRLGCEEM 280
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 132/270 (48%), Gaps = 18/270 (6%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ GK LG G F + + T A K + K ++ V + E ++M++L HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 92
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
V L +++++ ++ + GEL + K G F ET R ++ + Y HG G
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN---LHGTVGSPFYIAPEVLAGG 218
++HRDLKPENILL + I++ DFG A + + VG+ Y++PE+L
Sbjct: 153 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 219 YN-QAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLI 277
+++D+W+ G I+Y L++G+PPF + IF + + FP + ARDL+
Sbjct: 210 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARDLV 265
Query: 278 MGMLRVDPSTRLTAAE------VLAHSWME 301
+L +D + RL E + AH + E
Sbjct: 266 EKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 132/270 (48%), Gaps = 18/270 (6%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ GK LG G F + + T A K + K ++ V + E ++M++L HP
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 70
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
V L +++++ ++ + GEL + K G F ET R ++ + Y HG G
Sbjct: 71 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 130
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN---LHGTVGSPFYIAPEVLAGG 218
++HRDLKPENILL + I++ DFG A + + VG+ Y++PE+L
Sbjct: 131 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 187
Query: 219 YN-QAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLI 277
+++D+W+ G I+Y L++G+PPF + IF + + FP + ARDL+
Sbjct: 188 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARDLV 243
Query: 278 MGMLRVDPSTRLTAAE------VLAHSWME 301
+L +D + RL E + AH + E
Sbjct: 244 EKLLVLDATKRLGCEEMEGYGPLKAHPFFE 273
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 128/257 (49%), Gaps = 12/257 (4%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ GK LG G F + + T A K + K ++ V + E ++M++L HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 92
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
V L +++++ ++ + GEL + K G F ET R ++ + Y HG G
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN---LHGTVGSPFYIAPEVLAGG 218
++HRDLKPENILL + I++ DFG A + + VG+ Y++PE+L
Sbjct: 153 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 219 YN-QAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLI 277
+++D+W+ G I+Y L++G+PPF + IF + + FP + ARDL+
Sbjct: 210 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARDLV 265
Query: 278 MGMLRVDPSTRLTAAEV 294
+L +D + RL E+
Sbjct: 266 EKLLVLDATKRLGCEEM 282
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 132/270 (48%), Gaps = 18/270 (6%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ GK LG G F + + T A K + K ++ V + E ++M++L HP
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 69
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
V L +++++ ++ + GEL + K G F ET R ++ + Y HG G
Sbjct: 70 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 129
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN---LHGTVGSPFYIAPEVLAGG 218
++HRDLKPENILL + I++ DFG A + + VG+ Y++PE+L
Sbjct: 130 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 186
Query: 219 YN-QAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLI 277
+++D+W+ G I+Y L++G+PPF + IF + + FP + ARDL+
Sbjct: 187 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARDLV 242
Query: 278 MGMLRVDPSTRLTAAE------VLAHSWME 301
+L +D + RL E + AH + E
Sbjct: 243 EKLLVLDATKRLGCEEMEGYGPLKAHPFFE 272
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 132/270 (48%), Gaps = 18/270 (6%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ GK LG G F + + T A K + K ++ V + E ++M++L HP
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 93
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
V L +++++ ++ + GEL + K G F ET R ++ + Y HG G
Sbjct: 94 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 153
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN---LHGTVGSPFYIAPEVLAGG 218
++HRDLKPENILL + I++ DFG A + + VG+ Y++PE+L
Sbjct: 154 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 210
Query: 219 YN-QAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLI 277
+++D+W+ G I+Y L++G+PPF + IF + + FP + ARDL+
Sbjct: 211 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARDLV 266
Query: 278 MGMLRVDPSTRLTAAE------VLAHSWME 301
+L +D + RL E + AH + E
Sbjct: 267 EKLLVLDATKRLGCEEMEGYGPLKAHPFFE 296
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 132/270 (48%), Gaps = 18/270 (6%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ GK LG G F + + T A K + K ++ V + E ++M++L HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 92
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
V L +++++ ++ + GEL + K G F ET R ++ + Y HG G
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN---LHGTVGSPFYIAPEVLAGG 218
++HRDLKPENILL + I++ DFG A + + VG+ Y++PE+L
Sbjct: 153 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 219 YN-QAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLI 277
+++D+W+ G I+Y L++G+PPF + IF + + FP + ARDL+
Sbjct: 210 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARDLV 265
Query: 278 MGMLRVDPSTRLTAAE------VLAHSWME 301
+L +D + RL E + AH + E
Sbjct: 266 EKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 132/270 (48%), Gaps = 18/270 (6%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ GK LG G F + + T A K + K ++ V + E ++M++L HP
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 97
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
V L +++++ ++ + GEL + K G F ET R ++ + Y HG G
Sbjct: 98 FFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 157
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN---LHGTVGSPFYIAPEVLA-G 217
++HRDLKPENILL + I++ DFG A + + VG+ Y++PE+L
Sbjct: 158 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 214
Query: 218 GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLI 277
+++D+W+ G I+Y L++G+PPF + IF + + FP + ARDL+
Sbjct: 215 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARDLV 270
Query: 278 MGMLRVDPSTRLTAAE------VLAHSWME 301
+L +D + RL E + AH + E
Sbjct: 271 EKLLVLDATKRLGCEEMEGYGPLKAHPFFE 300
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 128/257 (49%), Gaps = 12/257 (4%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ GK LG G F + + T A K + K ++ V + E ++M++L HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 92
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
V L +++++ ++ + GEL + K G F ET R ++ + Y HG G
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN---LHGTVGSPFYIAPEVLAGG 218
++HRDLKPENILL + I++ DFG A + + VG+ Y++PE+L
Sbjct: 153 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 219 YN-QAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLI 277
+++D+W+ G I+Y L++G+PPF + IF + + FP + ARDL+
Sbjct: 210 SACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFP----EKFFPKARDLV 265
Query: 278 MGMLRVDPSTRLTAAEV 294
+L +D + RL E+
Sbjct: 266 EKLLVLDATKRLGCEEM 282
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 132/270 (48%), Gaps = 18/270 (6%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ GK LG G F + + T A K + K ++ V + E ++M++L HP
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 95
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
V L +++++ ++ + GEL + K G F ET R ++ + Y HG G
Sbjct: 96 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 155
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN---LHGTVGSPFYIAPEVLAGG 218
++HRDLKPENILL + I++ DFG A + + VG+ Y++PE+L
Sbjct: 156 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 212
Query: 219 YN-QAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLI 277
+++D+W+ G I+Y L++G+PPF + IF + + FP+ ARDL+
Sbjct: 213 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPAA----FFPKARDLV 268
Query: 278 MGMLRVDPSTRLTAAE------VLAHSWME 301
+L +D + RL E + AH + E
Sbjct: 269 EKLLVLDATKRLGCEEMEGYGPLKAHPFFE 298
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 127/257 (49%), Gaps = 12/257 (4%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ GK LG G F + T A K + K ++ V + E ++M++L HP
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 90
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
V L +++++ ++ + GEL + K G F ET R ++ + Y HG G
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 150
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN---LHGTVGSPFYIAPEVLAGG 218
++HRDLKPENILL + I++ DFG A + + VG+ Y++PE+L
Sbjct: 151 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 219 YN-QAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLI 277
+++D+W+ G I+Y L++G+PPF + IF + + FP + ARDL+
Sbjct: 208 SACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARDLV 263
Query: 278 MGMLRVDPSTRLTAAEV 294
+L +D + RL E+
Sbjct: 264 EKLLVLDATKRLGCEEM 280
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 132/270 (48%), Gaps = 18/270 (6%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ GK LG G F + + T A K + K ++ V + E ++M++L HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HP 92
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
V L +++++ ++ + G L + K G F ET R ++ + Y HG G
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG 152
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN---LHGTVGSPFYIAPEVLA-G 217
++HRDLKPENILL + I++ DFG A + + VG+ Y++PE+L
Sbjct: 153 IIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 209
Query: 218 GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLI 277
++++D+W+ G I+Y L++G+PPF + IF + + FP + ARDL+
Sbjct: 210 SASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARDLV 265
Query: 278 MGMLRVDPSTRLTAAE------VLAHSWME 301
+L +D + RL E + AH + E
Sbjct: 266 EKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 134/261 (51%), Gaps = 13/261 (4%)
Query: 31 DATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLE 90
D ++++ + VLGK G FG + K T E+ A K + KD ++ +DV +E
Sbjct: 336 DRMKLTDFNFLMVLGK----GSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVE 391
Query: 91 IEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHL 150
++ P + L + ++ D ++ +ME GG+L + +++ GRF E A +
Sbjct: 392 KRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEI 451
Query: 151 MQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLAT-YIKAGQNLHGTVGSPFY 209
+ + G+++RDLK +N++L S IK+ADFG+ I G G+P Y
Sbjct: 452 AIGLFFLQSKGIIYRDLKLDNVML---DSEGHIKIADFGMCKENIWDGVTTKXFCGTPDY 508
Query: 210 IAPEVLA-GGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDH 268
IAPE++A Y ++ D W+ GV+LY +L+G PF G+ + ++F ++ ++ +P
Sbjct: 509 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKS---- 564
Query: 269 ISASARDLIMGMLRVDPSTRL 289
+S A + G++ P RL
Sbjct: 565 MSKEAVAICKGLMTKHPGKRL 585
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 157/303 (51%), Gaps = 39/303 (12%)
Query: 40 DRYVLGKQLGWGQFG---VIRECSDKFTGEVLACKSIAKDRLV----TVEDVRSIKLEIE 92
+ + L K LG G +G ++R+ S TG++ A K + K +V T E R+ E +
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRT---ERQ 110
Query: 93 IMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQ 152
++ + P +V L ++ E +HL+++ GGELF L + RF+E E ++ ++
Sbjct: 111 VLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVL 170
Query: 153 VVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN--LHGTVGSPFYI 210
+ + H G+++RD+K ENILL S+ + L DFGL+ A + + G+ Y+
Sbjct: 171 ALEHLHKLGIIYRDIKLENILL---DSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYM 227
Query: 211 APEVLAG---GYNQAADVWSAGVILYILLSGMPPFW----GKTKSKIFDAVRAADLRFPS 263
AP+++ G G+++A D WS GV++Y LL+G PF ++++I + ++ +P
Sbjct: 228 APDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQ 287
Query: 264 DPWDHISASARDLIMGMLRVDPSTRL-----TAAEVLAHSWMEECEQVAQKPCKQDDLCC 318
+ +SA A+DLI +L DP RL A E+ H + ++ DDL
Sbjct: 288 E----MSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK--------INWDDLAA 335
Query: 319 KQL 321
K++
Sbjct: 336 KKV 338
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 134/261 (51%), Gaps = 13/261 (4%)
Query: 31 DATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLE 90
D ++++ + VLGK G FG + K T E+ A K + KD ++ +DV +E
Sbjct: 15 DRMKLTDFNFLMVLGK----GSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVE 70
Query: 91 IEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHL 150
++ P + L + ++ D ++ +ME GG+L + +++ GRF E A +
Sbjct: 71 KRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEI 130
Query: 151 MQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLAT-YIKAGQNLHGTVGSPFY 209
+ + G+++RDLK +N++L S IK+ADFG+ I G G+P Y
Sbjct: 131 AIGLFFLQSKGIIYRDLKLDNVML---DSEGHIKIADFGMCKENIWDGVTTKXFCGTPDY 187
Query: 210 IAPEVLA-GGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDH 268
IAPE++A Y ++ D W+ GV+LY +L+G PF G+ + ++F ++ ++ +P
Sbjct: 188 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKS---- 243
Query: 269 ISASARDLIMGMLRVDPSTRL 289
+S A + G++ P RL
Sbjct: 244 MSKEAVAICKGLMTKHPGKRL 264
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 150/309 (48%), Gaps = 33/309 (10%)
Query: 39 SDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVT---VEDVR--SIKLEIEI 93
S +Y LG G FG + DK + + K I K++++ +ED + + LEI I
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 94 MTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGG-ELFHRLEKYGRFSETEARVIFRHLMQ 152
++++ H N++ + ++E + + L+ME G +LF ++++ R E A IFR L+
Sbjct: 83 LSRVE-HANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVS 141
Query: 153 VVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAP 212
V Y ++HRD+K ENI++A + IKL DFG A Y++ G+ + G+ Y AP
Sbjct: 142 AVGYLRLKDIIHRDIKDENIVIAEDFT---IKLIDFGSAAYLERGKLFYTFCGTIEYCAP 198
Query: 213 EVLAGGYNQAADV--WSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHIS 270
EVL G + ++ WS GV LY L+ PF ++ + V AA P +S
Sbjct: 199 EVLMGNPYRGPELEMWSLGVTLYTLVFEENPF-----CELEETVEAA-----IHPPYLVS 248
Query: 271 ASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVA----------QKPCKQDDLCCKQ 320
L+ G+L+ P R T +++ W+ + +A KP + L
Sbjct: 249 KELMSLVSGLLQPVPERRTTLEKLVTDPWVTQPVNLADYTWEEVFRVNKP-ESGVLSAAS 307
Query: 321 LEVGGSSFS 329
LE+G S S
Sbjct: 308 LEMGNRSLS 316
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 145/291 (49%), Gaps = 30/291 (10%)
Query: 36 SNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRS----IKLEI 91
+ L +Y++G LG G +G ++E D E L +++ + + + + +K EI
Sbjct: 1 AKLIGKYLMGDLLGEGSYGKVKEVLDS---ETLCRRAVKILKKKKLRRIPNGEANVKKEI 57
Query: 92 EIMTKLSGHPNVVDLKAVY--EEEDYVHLLMELCAGG--ELFHRLEKYGRFSETEARVIF 147
+++ +L H NV+ L V EE+ ++++ME C G E+ + + RF +A F
Sbjct: 58 QLLRRLR-HKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPE-KRFPVCQAHGYF 115
Query: 148 RHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIK---AGQNLHGTV 204
L+ + Y H G+VH+D+KP N+LL T + +K++ G+A + A +
Sbjct: 116 CQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGT---LKISALGVAEALHPFAADDTCRTSQ 172
Query: 205 GSPFYIAPEVLAG-----GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADL 259
GSP + PE+ G G+ D+WSAGV LY + +G+ PF G K+F+ +
Sbjct: 173 GSPAFQPPEIANGLDTFSGFK--VDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSY 230
Query: 260 RFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKP 310
P D +S DL+ GML +P+ R + ++ HSW + A+ P
Sbjct: 231 AIPGDCGPPLS----DLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPAEAP 277
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/279 (32%), Positives = 136/279 (48%), Gaps = 21/279 (7%)
Query: 22 VSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTV 81
+S TI + ++ Y + K +G G FG ++ K T +V A K ++K ++
Sbjct: 51 LSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKR 110
Query: 82 EDVRSIKLEIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSET 141
D E +IM + P VV L ++++ Y++++ME GG+L + + Y E
Sbjct: 111 SDSAFFWEERDIMA-FANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD-VPEK 168
Query: 142 EARVIFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYI-KAGQ-N 199
AR ++ + H G +HRD+KP+N+LL S +KLADFG + K G
Sbjct: 169 WARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEGMVR 225
Query: 200 LHGTVGSPFYIAPEVLA-----GGYNQAADVWSAGVILYILLSGMPPFWGK----TKSKI 250
VG+P YI+PEVL G Y + D WS GV LY +L G PF+ T SKI
Sbjct: 226 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKI 285
Query: 251 FDAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRL 289
+ + L FP D + IS A++LI L D RL
Sbjct: 286 MNHKNS--LTFPDD--NDISKEAKNLICAFL-TDREVRL 319
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/279 (32%), Positives = 136/279 (48%), Gaps = 21/279 (7%)
Query: 22 VSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTV 81
+S TI + ++ Y + K +G G FG ++ K T +V A K ++K ++
Sbjct: 56 LSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKR 115
Query: 82 EDVRSIKLEIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSET 141
D E +IM + P VV L ++++ Y++++ME GG+L + + Y E
Sbjct: 116 SDSAFFWEERDIMA-FANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD-VPEK 173
Query: 142 EARVIFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYI-KAGQ-N 199
AR ++ + H G +HRD+KP+N+LL S +KLADFG + K G
Sbjct: 174 WARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEGMVR 230
Query: 200 LHGTVGSPFYIAPEVLA-----GGYNQAADVWSAGVILYILLSGMPPFWGK----TKSKI 250
VG+P YI+PEVL G Y + D WS GV LY +L G PF+ T SKI
Sbjct: 231 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKI 290
Query: 251 FDAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRL 289
+ + L FP D + IS A++LI L D RL
Sbjct: 291 MNHKNS--LTFPDD--NDISKEAKNLICAFL-TDREVRL 324
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/279 (32%), Positives = 136/279 (48%), Gaps = 21/279 (7%)
Query: 22 VSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTV 81
+S TI + ++ Y + K +G G FG ++ K T +V A K ++K ++
Sbjct: 56 LSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKR 115
Query: 82 EDVRSIKLEIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSET 141
D E +IM + P VV L ++++ Y++++ME GG+L + + Y E
Sbjct: 116 SDSAFFWEERDIMA-FANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD-VPEK 173
Query: 142 EARVIFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYI-KAGQ-N 199
AR ++ + H G +HRD+KP+N+LL S +KLADFG + K G
Sbjct: 174 WARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEGMVR 230
Query: 200 LHGTVGSPFYIAPEVLA-----GGYNQAADVWSAGVILYILLSGMPPFWGK----TKSKI 250
VG+P YI+PEVL G Y + D WS GV LY +L G PF+ T SKI
Sbjct: 231 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKI 290
Query: 251 FDAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRL 289
+ + L FP D + IS A++LI L D RL
Sbjct: 291 MNHKNS--LTFPDD--NDISKEAKNLICAFL-TDREVRL 324
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 129/253 (50%), Gaps = 10/253 (3%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ + K++G GQF + + G +A K + L+ + EI+++ +L+ HP
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN-HP 92
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSE-TEARVIFRHLMQVVS---YC 157
NV+ A + E++ +++++EL G+L ++ + + R ++++ +Q+ S +
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM 152
Query: 158 HGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNL-HGTVGSPFYIAPE-VL 215
H V+HRD+KP N+ + +++ +KL D GL + + H VG+P+Y++PE +
Sbjct: 153 HSRRVMHRDIKPANVFI---TATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIH 209
Query: 216 AGGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARD 275
GYN +D+WS G +LY + + PF+G + + +P P DH S R
Sbjct: 210 ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQ 269
Query: 276 LIMGMLRVDPSTR 288
L+ + DP R
Sbjct: 270 LVNMCINPDPEKR 282
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 135/265 (50%), Gaps = 22/265 (8%)
Query: 47 QLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDL 106
+LG G FG + + +K TG + A K I + E++ +EIEI+ HP +V L
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYIVEIEILAT-CDHPYIVKL 81
Query: 107 KAVYEEEDYVHLLMELCAGGELFHRLEKYGR-FSETEARVIFRHLMQVVSYCHGNGVVHR 165
Y + + +++E C GG + + + R +E + +V+ R +++ +++ H ++HR
Sbjct: 82 LGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHR 141
Query: 166 DLKPENILLATKSSSSPIKLADFGL-ATYIKAGQNLHGTVGSPFYIAPEVLA------GG 218
DLK N+L+ + I+LADFG+ A +K Q +G+P+++APEV+
Sbjct: 142 DLKAGNVLMTLEGD---IRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTP 198
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAAD---LRFPSDPWDHISASARD 275
Y+ AD+WS G+ L + PP ++ + +D L PS W S RD
Sbjct: 199 YDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSK-W---SVEFRD 254
Query: 276 LIMGMLRVDPSTRLTAAEVLAHSWM 300
+ L +P TR +AA++L H ++
Sbjct: 255 FLKIALDKNPETRPSAAQLLEHPFV 279
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 158/338 (46%), Gaps = 57/338 (16%)
Query: 1 MDTNNSEDSSQLSTQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECS 60
M + +D S+++T V + G D Q + +D V+G G FGV+ +
Sbjct: 26 MKVSRDKDGSKVTT-------VVATPGQGPDRPQEVSYTDTKVIGN----GSFGVVYQAK 74
Query: 61 DKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVY----EEEDYV 116
+GE++A K + +D+ R E++IM KL H N+V L+ + E++D V
Sbjct: 75 LCDSGELVAIKKVLQDK-------RFKNRELQIMRKLD-HCNIVRLRYFFYSSGEKKDEV 126
Query: 117 HLLMELCAGGELFHRLEK-YGRFSET----EARVIFRHLMQVVSYCHGNGVVHRDLKPEN 171
+L + L E +R+ + Y R +T ++ L + ++Y H G+ HRD+KP+N
Sbjct: 127 YLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQN 186
Query: 172 ILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAGG--YNQAADVWSAG 229
+LL ++ +KL DFG A + G+ + S +Y APE++ G Y + DVWSAG
Sbjct: 187 LLLDPDTAV--LKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAG 244
Query: 230 VILYILLSGMPPFWG----------------KTKSKIFDA-VRAADLRFP---SDPWDHI 269
+L LL G P F G T+ +I + + +FP + PW +
Sbjct: 245 CVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKV 304
Query: 270 -----SASARDLIMGMLRVDPSTRLTAAEVLAHSWMEE 302
A L +L P+ RLT E AHS+ +E
Sbjct: 305 FRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 342
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 158/338 (46%), Gaps = 57/338 (16%)
Query: 1 MDTNNSEDSSQLSTQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECS 60
M + +D S+++T V + G D Q + +D V+G G FGV+ +
Sbjct: 4 MKVSRDKDGSKVTT-------VVATPGQGPDRPQEVSYTDTKVIGN----GSFGVVYQAK 52
Query: 61 DKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVY----EEEDYV 116
+GE++A K + +D+ R E++IM KL H N+V L+ + E++D V
Sbjct: 53 LCDSGELVAIKKVLQDK-------RFKNRELQIMRKLD-HCNIVRLRYFFYSSGEKKDEV 104
Query: 117 HLLMELCAGGELFHRLEK-YGRFSET----EARVIFRHLMQVVSYCHGNGVVHRDLKPEN 171
+L + L E +R+ + Y R +T ++ L + ++Y H G+ HRD+KP+N
Sbjct: 105 YLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQN 164
Query: 172 ILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAGG--YNQAADVWSAG 229
+LL ++ +KL DFG A + G+ + S +Y APE++ G Y + DVWSAG
Sbjct: 165 LLLDPDTAV--LKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAG 222
Query: 230 VILYILLSGMPPFWG----------------KTKSKIFDA-VRAADLRFP---SDPWDHI 269
+L LL G P F G T+ +I + + +FP + PW +
Sbjct: 223 CVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKV 282
Query: 270 -----SASARDLIMGMLRVDPSTRLTAAEVLAHSWMEE 302
A L +L P+ RLT E AHS+ +E
Sbjct: 283 FRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 320
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 158/338 (46%), Gaps = 57/338 (16%)
Query: 1 MDTNNSEDSSQLSTQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECS 60
M + +D S+++T V + G D Q + +D V+G G FGV+ +
Sbjct: 20 MKVSRDKDGSKVTT-------VVATPGQGPDRPQEVSYTDTKVIGN----GSFGVVYQAK 68
Query: 61 DKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVY----EEEDYV 116
+GE++A K + +D+ R E++IM KL H N+V L+ + E++D V
Sbjct: 69 LCDSGELVAIKKVLQDK-------RFKNRELQIMRKLD-HCNIVRLRYFFYSSGEKKDEV 120
Query: 117 HLLMELCAGGELFHRLEK-YGRFSET----EARVIFRHLMQVVSYCHGNGVVHRDLKPEN 171
+L + L E +R+ + Y R +T ++ L + ++Y H G+ HRD+KP+N
Sbjct: 121 YLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQN 180
Query: 172 ILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAGG--YNQAADVWSAG 229
+LL ++ +KL DFG A + G+ + S +Y APE++ G Y + DVWSAG
Sbjct: 181 LLLDPDTAV--LKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAG 238
Query: 230 VILYILLSGMPPFWG----------------KTKSKIFDA-VRAADLRFP---SDPWDHI 269
+L LL G P F G T+ +I + + +FP + PW +
Sbjct: 239 CVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKV 298
Query: 270 -----SASARDLIMGMLRVDPSTRLTAAEVLAHSWMEE 302
A L +L P+ RLT E AHS+ +E
Sbjct: 299 FRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 336
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 135/265 (50%), Gaps = 22/265 (8%)
Query: 47 QLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDL 106
+LG G FG + + +K TG + A K I + E++ +EIEI+ HP +V L
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYIVEIEILAT-CDHPYIVKL 73
Query: 107 KAVYEEEDYVHLLMELCAGGELFHRLEKYGR-FSETEARVIFRHLMQVVSYCHGNGVVHR 165
Y + + +++E C GG + + + R +E + +V+ R +++ +++ H ++HR
Sbjct: 74 LGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHR 133
Query: 166 DLKPENILLATKSSSSPIKLADFGL-ATYIKAGQNLHGTVGSPFYIAPEVLA------GG 218
DLK N+L+ + I+LADFG+ A +K Q +G+P+++APEV+
Sbjct: 134 DLKAGNVLMTLEGD---IRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTP 190
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAAD---LRFPSDPWDHISASARD 275
Y+ AD+WS G+ L + PP ++ + +D L PS W S RD
Sbjct: 191 YDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSK-W---SVEFRD 246
Query: 276 LIMGMLRVDPSTRLTAAEVLAHSWM 300
+ L +P TR +AA++L H ++
Sbjct: 247 FLKIALDKNPETRPSAAQLLEHPFV 271
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 142/297 (47%), Gaps = 46/297 (15%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
Y K +G G FGV+ + +GE++A K + +D+ R E++IM KL H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-------RFKNRELQIMRKLD-HC 73
Query: 102 NVVDLKAVY----EEEDYVHLLMELCAGGELFHRLEK-YGRFSET----EARVIFRHLMQ 152
N+V L+ + E++D V+L + L E +R+ + Y R +T ++ L +
Sbjct: 74 NIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 153 VVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAP 212
++Y H G+ HRD+KP+N+LL ++ +KL DFG A + G+ + S +Y AP
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAV--LKLCDFGSAKQLVRGEPNVSXICSRYYRAP 191
Query: 213 EVLAGG--YNQAADVWSAGVILYILLSGMPPFWG----------------KTKSKIFDA- 253
E++ G Y + DVWSAG +L LL G P F G T+ +I +
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 251
Query: 254 VRAADLRFP---SDPWDHI-----SASARDLIMGMLRVDPSTRLTAAEVLAHSWMEE 302
+ +FP + PW + A L +L P+ RLT E AHS+ +E
Sbjct: 252 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 308
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 158/338 (46%), Gaps = 57/338 (16%)
Query: 1 MDTNNSEDSSQLSTQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECS 60
M + +D S+++T V + G D Q + +D V+G G FGV+ +
Sbjct: 26 MKVSRDKDGSKVTT-------VVATPGQGPDRPQEVSYTDTKVIGN----GSFGVVYQAK 74
Query: 61 DKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVY----EEEDYV 116
+GE++A K + +D+ R E++IM KL H N+V L+ + E++D V
Sbjct: 75 LCDSGELVAIKKVLQDK-------RFKNRELQIMRKLD-HCNIVRLRYFFYSSGEKKDEV 126
Query: 117 HLLMELCAGGELFHRLEK-YGRFSET----EARVIFRHLMQVVSYCHGNGVVHRDLKPEN 171
+L + L E +R+ + Y R +T ++ L + ++Y H G+ HRD+KP+N
Sbjct: 127 YLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQN 186
Query: 172 ILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAGG--YNQAADVWSAG 229
+LL ++ +KL DFG A + G+ + S +Y APE++ G Y + DVWSAG
Sbjct: 187 LLLDPDTAV--LKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAG 244
Query: 230 VILYILLSGMPPFWG----------------KTKSKIFDA-VRAADLRFP---SDPWDHI 269
+L LL G P F G T+ +I + + +FP + PW +
Sbjct: 245 CVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKV 304
Query: 270 -----SASARDLIMGMLRVDPSTRLTAAEVLAHSWMEE 302
A L +L P+ RLT E AHS+ +E
Sbjct: 305 FRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 342
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/258 (32%), Positives = 129/258 (50%), Gaps = 12/258 (4%)
Query: 48 LGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLK 107
LG G FG + C + TG++ ACK + K R+ + E +I+ K++ VV L
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSR-FVVSLA 250
Query: 108 AVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR--HLMQVVSYCHGNGVVHR 165
YE +D + L++ L GG+L + G+ EAR +F + + H +V+R
Sbjct: 251 YAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYR 310
Query: 166 DLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAG-GYNQAAD 224
DLKPENILL I+++D GLA ++ GQ + G VG+ Y+APEV+ Y + D
Sbjct: 311 DLKPENILL---DDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPD 367
Query: 225 VWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVD 284
W+ G +LY +++G PF + K + V P + + S AR L +L D
Sbjct: 368 WWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKD 427
Query: 285 PSTRL-----TAAEVLAH 297
P+ RL +A EV H
Sbjct: 428 PAERLGCRGGSAREVKEH 445
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 158/338 (46%), Gaps = 57/338 (16%)
Query: 1 MDTNNSEDSSQLSTQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECS 60
M + +D S+++T V + G D Q + +D V+G G FGV+ +
Sbjct: 28 MKVSRDKDGSKVTT-------VVATPGQGPDRPQEVSYTDTKVIGN----GSFGVVYQAK 76
Query: 61 DKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVY----EEEDYV 116
+GE++A K + +D+ R E++IM KL H N+V L+ + E++D V
Sbjct: 77 LCDSGELVAIKKVLQDK-------RFKNRELQIMRKLD-HCNIVRLRYFFYSSGEKKDEV 128
Query: 117 HLLMELCAGGELFHRLEK-YGRFSET----EARVIFRHLMQVVSYCHGNGVVHRDLKPEN 171
+L + L E +R+ + Y R +T ++ L + ++Y H G+ HRD+KP+N
Sbjct: 129 YLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQN 188
Query: 172 ILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAGG--YNQAADVWSAG 229
+LL ++ +KL DFG A + G+ + S +Y APE++ G Y + DVWSAG
Sbjct: 189 LLLDPDTAV--LKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAG 246
Query: 230 VILYILLSGMPPFWG----------------KTKSKIFDA-VRAADLRFP---SDPWDHI 269
+L LL G P F G T+ +I + + +FP + PW +
Sbjct: 247 CVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKV 306
Query: 270 -----SASARDLIMGMLRVDPSTRLTAAEVLAHSWMEE 302
A L +L P+ RLT E AHS+ +E
Sbjct: 307 FRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 344
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 145/297 (48%), Gaps = 47/297 (15%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
Y K +G G FGV+ F +++ +A +++ +D R E++IM ++ HP
Sbjct: 42 YTNCKVIGNGSFGVV------FQAKLVESDEVAIKKVL--QDKRFKNRELQIM-RIVKHP 92
Query: 102 NVVDLKAVY----EEEDYVHLLMELCAGGELFHRLEK-YGRFSETEARVIFR----HLMQ 152
NVVDLKA + +++D V L + L E +R + Y + +T ++ + L++
Sbjct: 93 NVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLR 152
Query: 153 VVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAP 212
++Y H G+ HRD+KP+N+LL S +KL DFG A + AG+ + S +Y AP
Sbjct: 153 SLAYIHSIGICHRDIKPQNLLLDPPSGV--LKLIDFGSAKILIAGEPNVSXICSRYYRAP 210
Query: 213 EVLAGG--YNQAADVWSAGVILYILLSGMPPFWGKTK-SKIFDAVRA------------- 256
E++ G Y D+WS G ++ L+ G P F G++ ++ + ++
Sbjct: 211 ELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMN 270
Query: 257 ---ADLRFP---SDPWDHI-----SASARDLIMGMLRVDPSTRLTAAEVLAHSWMEE 302
+ +FP P+ + A DLI +L PS RLTA E L H + +E
Sbjct: 271 PNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDE 327
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 142/297 (47%), Gaps = 46/297 (15%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
Y K +G G FGV+ + +GE++A K + +D+ R E++IM KL H
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-------RFKNRELQIMRKLD-HC 81
Query: 102 NVVDLKAVY----EEEDYVHLLMELCAGGELFHRLEK-YGRFSET----EARVIFRHLMQ 152
N+V L+ + E++D V+L + L E +R+ + Y R +T ++ L +
Sbjct: 82 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 141
Query: 153 VVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAP 212
++Y H G+ HRD+KP+N+LL ++ +KL DFG A + G+ + S +Y AP
Sbjct: 142 SLAYIHSFGICHRDIKPQNLLLDPDTAV--LKLCDFGSAKQLVRGEPNVSXICSRYYRAP 199
Query: 213 EVLAGG--YNQAADVWSAGVILYILLSGMPPFWG----------------KTKSKIFDA- 253
E++ G Y + DVWSAG +L LL G P F G T+ +I +
Sbjct: 200 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 259
Query: 254 VRAADLRFP---SDPWDHI-----SASARDLIMGMLRVDPSTRLTAAEVLAHSWMEE 302
+ +FP + PW + A L +L P+ RLT E AHS+ +E
Sbjct: 260 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 316
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 158/338 (46%), Gaps = 57/338 (16%)
Query: 1 MDTNNSEDSSQLSTQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECS 60
M + +D S+++T V + G D Q + +D V+G G FGV+ +
Sbjct: 30 MKVSRDKDGSKVTT-------VVATPGQGPDRPQEVSYTDTKVIGN----GSFGVVYQAK 78
Query: 61 DKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVY----EEEDYV 116
+GE++A K + +D+ R E++IM KL H N+V L+ + E++D V
Sbjct: 79 LCDSGELVAIKKVLQDK-------RFKNRELQIMRKLD-HCNIVRLRYFFYSSGEKKDEV 130
Query: 117 HLLMELCAGGELFHRLEK-YGRFSET----EARVIFRHLMQVVSYCHGNGVVHRDLKPEN 171
+L + L E +R+ + Y R +T ++ L + ++Y H G+ HRD+KP+N
Sbjct: 131 YLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQN 190
Query: 172 ILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAGG--YNQAADVWSAG 229
+LL ++ +KL DFG A + G+ + S +Y APE++ G Y + DVWSAG
Sbjct: 191 LLLDPDTAV--LKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAG 248
Query: 230 VILYILLSGMPPFWG----------------KTKSKIFDA-VRAADLRFP---SDPWDHI 269
+L LL G P F G T+ +I + + +FP + PW +
Sbjct: 249 CVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKV 308
Query: 270 -----SASARDLIMGMLRVDPSTRLTAAEVLAHSWMEE 302
A L +L P+ RLT E AHS+ +E
Sbjct: 309 FRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 346
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/258 (32%), Positives = 129/258 (50%), Gaps = 12/258 (4%)
Query: 48 LGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLK 107
LG G FG + C + TG++ ACK + K R+ + E +I+ K++ VV L
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSR-FVVSLA 250
Query: 108 AVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR--HLMQVVSYCHGNGVVHR 165
YE +D + L++ L GG+L + G+ EAR +F + + H +V+R
Sbjct: 251 YAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYR 310
Query: 166 DLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAG-GYNQAAD 224
DLKPENILL I+++D GLA ++ GQ + G VG+ Y+APEV+ Y + D
Sbjct: 311 DLKPENILLDDHGH---IRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPD 367
Query: 225 VWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVD 284
W+ G +LY +++G PF + K + V P + + S AR L +L D
Sbjct: 368 WWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKD 427
Query: 285 PSTRL-----TAAEVLAH 297
P+ RL +A EV H
Sbjct: 428 PAERLGCRGGSAREVKEH 445
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 142/297 (47%), Gaps = 46/297 (15%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
Y K +G G FGV+ + +GE++A K + +D+ R E++IM KL H
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-------RFKNRELQIMRKLD-HC 92
Query: 102 NVVDLKAVY----EEEDYVHLLMELCAGGELFHRLEK-YGRFSET----EARVIFRHLMQ 152
N+V L+ + E++D V+L + L E +R+ + Y R +T ++ L +
Sbjct: 93 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 152
Query: 153 VVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAP 212
++Y H G+ HRD+KP+N+LL ++ +KL DFG A + G+ + S +Y AP
Sbjct: 153 SLAYIHSFGICHRDIKPQNLLLDPDTAV--LKLCDFGSAKQLVRGEPNVSXICSRYYRAP 210
Query: 213 EVLAGG--YNQAADVWSAGVILYILLSGMPPFWG----------------KTKSKIFDA- 253
E++ G Y + DVWSAG +L LL G P F G T+ +I +
Sbjct: 211 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 270
Query: 254 VRAADLRFP---SDPWDHI-----SASARDLIMGMLRVDPSTRLTAAEVLAHSWMEE 302
+ +FP + PW + A L +L P+ RLT E AHS+ +E
Sbjct: 271 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 327
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 142/297 (47%), Gaps = 46/297 (15%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
Y K +G G FGV+ + +GE++A K + +D+ R E++IM KL H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-------RFKNRELQIMRKLD-HC 73
Query: 102 NVVDLKAVY----EEEDYVHLLMELCAGGELFHRLEK-YGRFSET----EARVIFRHLMQ 152
N+V L+ + E++D V+L + L E +R+ + Y R +T ++ L +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 153 VVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAP 212
++Y H G+ HRD+KP+N+LL ++ +KL DFG A + G+ + S +Y AP
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAV--LKLCDFGSAKQLVRGEPNVSXICSRYYRAP 191
Query: 213 EVLAGG--YNQAADVWSAGVILYILLSGMPPFWG----------------KTKSKIFDA- 253
E++ G Y + DVWSAG +L LL G P F G T+ +I +
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 251
Query: 254 VRAADLRFP---SDPWDHI-----SASARDLIMGMLRVDPSTRLTAAEVLAHSWMEE 302
+ +FP + PW + A L +L P+ RLT E AHS+ +E
Sbjct: 252 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 308
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 142/297 (47%), Gaps = 46/297 (15%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
Y K +G G FGV+ + +GE++A K + +D+ R E++IM KL H
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-------RFKNRELQIMRKLD-HC 85
Query: 102 NVVDLKAVY----EEEDYVHLLMELCAGGELFHRLEK-YGRFSET----EARVIFRHLMQ 152
N+V L+ + E++D V+L + L E +R+ + Y R +T ++ L +
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 145
Query: 153 VVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAP 212
++Y H G+ HRD+KP+N+LL ++ +KL DFG A + G+ + S +Y AP
Sbjct: 146 SLAYIHSFGICHRDIKPQNLLLDPDTAV--LKLCDFGSAKQLVRGEPNVSXICSRYYRAP 203
Query: 213 EVLAGG--YNQAADVWSAGVILYILLSGMPPFWG----------------KTKSKIFDA- 253
E++ G Y + DVWSAG +L LL G P F G T+ +I +
Sbjct: 204 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 263
Query: 254 VRAADLRFP---SDPWDHI-----SASARDLIMGMLRVDPSTRLTAAEVLAHSWMEE 302
+ +FP + PW + A L +L P+ RLT E AHS+ +E
Sbjct: 264 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 320
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 158/338 (46%), Gaps = 57/338 (16%)
Query: 1 MDTNNSEDSSQLSTQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECS 60
M + +D S+++T V + G D Q + +D V+G G FGV+ +
Sbjct: 71 MKVSRDKDGSKVTT-------VVATPGQGPDRPQEVSYTDTKVIGN----GSFGVVYQAK 119
Query: 61 DKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVY----EEEDYV 116
+GE++A K + +D+ R E++IM KL H N+V L+ + E++D V
Sbjct: 120 LCDSGELVAIKKVLQDK-------RFKNRELQIMRKLD-HCNIVRLRYFFYSSGEKKDEV 171
Query: 117 HLLMELCAGGELFHRLEK-YGRFSET----EARVIFRHLMQVVSYCHGNGVVHRDLKPEN 171
+L + L E +R+ + Y R +T ++ L + ++Y H G+ HRD+KP+N
Sbjct: 172 YLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQN 231
Query: 172 ILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAGG--YNQAADVWSAG 229
+LL ++ +KL DFG A + G+ + S +Y APE++ G Y + DVWSAG
Sbjct: 232 LLLDPDTAV--LKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAG 289
Query: 230 VILYILLSGMPPFWG----------------KTKSKIFDA-VRAADLRFP---SDPWDHI 269
+L LL G P F G T+ +I + + +FP + PW +
Sbjct: 290 CVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKV 349
Query: 270 -----SASARDLIMGMLRVDPSTRLTAAEVLAHSWMEE 302
A L +L P+ RLT E AHS+ +E
Sbjct: 350 FRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 387
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 124/259 (47%), Gaps = 18/259 (6%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ L + +G G + + K T + A K + K+ + ED+ ++ E + + S HP
Sbjct: 22 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 81
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
+V L + ++ E + ++E GG+L +++ + E AR + ++Y H G
Sbjct: 82 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 141
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATY-IKAGQNLHGTVGSPFYIAPEVLAG-GY 219
+++RDLK +N+LL S IKL D+G+ ++ G G+P YIAPE+L G Y
Sbjct: 142 IIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDY 198
Query: 220 NQAADVWSAGVILYILLSGMPPF---------WGKTKSKIFDAVRAADLRFPSDPWDHIS 270
+ D W+ GV+++ +++G PF T+ +F + +R P +S
Sbjct: 199 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR----SMS 254
Query: 271 ASARDLIMGMLRVDPSTRL 289
A ++ L DP RL
Sbjct: 255 VKAASVLKSFLNKDPKERL 273
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 142/297 (47%), Gaps = 46/297 (15%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
Y K +G G FGV+ + +GE++A K + +D+ R E++IM KL H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-------RFKNRELQIMRKLD-HC 73
Query: 102 NVVDLKAVY----EEEDYVHLLMELCAGGELFHRLEK-YGRFSET----EARVIFRHLMQ 152
N+V L+ + E++D V+L + L E +R+ + Y R +T ++ L +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 153 VVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAP 212
++Y H G+ HRD+KP+N+LL ++ +KL DFG A + G+ + S +Y AP
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAV--LKLCDFGSAKQLVRGEPNVSXICSRYYRAP 191
Query: 213 EVLAGG--YNQAADVWSAGVILYILLSGMPPFWG----------------KTKSKIFDA- 253
E++ G Y + DVWSAG +L LL G P F G T+ +I +
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 251
Query: 254 VRAADLRFP---SDPWDHI-----SASARDLIMGMLRVDPSTRLTAAEVLAHSWMEE 302
+ +FP + PW + A L +L P+ RLT E AHS+ +E
Sbjct: 252 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 308
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 142/297 (47%), Gaps = 46/297 (15%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
Y K +G G FGV+ + +GE++A K + +D+ R E++IM KL H
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-------RFKNRELQIMRKLD-HC 74
Query: 102 NVVDLKAVY----EEEDYVHLLMELCAGGELFHRLEK-YGRFSET----EARVIFRHLMQ 152
N+V L+ + E++D V+L + L E +R+ + Y R +T ++ L +
Sbjct: 75 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 134
Query: 153 VVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAP 212
++Y H G+ HRD+KP+N+LL ++ +KL DFG A + G+ + S +Y AP
Sbjct: 135 SLAYIHSFGICHRDIKPQNLLLDPDTAV--LKLCDFGSAKQLVRGEPNVSXICSRYYRAP 192
Query: 213 EVLAGG--YNQAADVWSAGVILYILLSGMPPFWG----------------KTKSKIFDA- 253
E++ G Y + DVWSAG +L LL G P F G T+ +I +
Sbjct: 193 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 252
Query: 254 VRAADLRFP---SDPWDHI-----SASARDLIMGMLRVDPSTRLTAAEVLAHSWMEE 302
+ +FP + PW + A L +L P+ RLT E AHS+ +E
Sbjct: 253 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 309
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 142/297 (47%), Gaps = 46/297 (15%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
Y K +G G FGV+ + +GE++A K + +D+ R E++IM KL H
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-------RFKNRELQIMRKLD-HC 77
Query: 102 NVVDLKAVY----EEEDYVHLLMELCAGGELFHRLEK-YGRFSET----EARVIFRHLMQ 152
N+V L+ + E++D V+L + L E +R+ + Y R +T ++ L +
Sbjct: 78 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 137
Query: 153 VVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAP 212
++Y H G+ HRD+KP+N+LL ++ +KL DFG A + G+ + S +Y AP
Sbjct: 138 SLAYIHSFGICHRDIKPQNLLLDPDTAV--LKLCDFGSAKQLVRGEPNVSXICSRYYRAP 195
Query: 213 EVLAGG--YNQAADVWSAGVILYILLSGMPPFWG----------------KTKSKIFDA- 253
E++ G Y + DVWSAG +L LL G P F G T+ +I +
Sbjct: 196 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 255
Query: 254 VRAADLRFP---SDPWDHI-----SASARDLIMGMLRVDPSTRLTAAEVLAHSWMEE 302
+ +FP + PW + A L +L P+ RLT E AHS+ +E
Sbjct: 256 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 312
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 139/288 (48%), Gaps = 30/288 (10%)
Query: 39 SDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLS 98
++ Y + K +G G FG ++ K + +V A K ++K ++ D E +IM +
Sbjct: 74 AEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMA-FA 132
Query: 99 GHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCH 158
P VV L ++++ Y++++ME GG+L + + Y E A+ ++ + H
Sbjct: 133 NSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYD-VPEKWAKFYTAEVVLALDAIH 191
Query: 159 GNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLH--GTVGSPFYIAPEVLA 216
G++HRD+KP+N+LL +KLADFG + +H VG+P YI+PEVL
Sbjct: 192 SMGLIHRDVKPDNMLL---DKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLK 248
Query: 217 -----GGYNQAADVWSAGVILYILLSGMPPFWGK----TKSKIFDAVRAADLRFPSDPWD 267
G Y + D WS GV L+ +L G PF+ T SKI D + L FP D
Sbjct: 249 SQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNS--LCFPEDA-- 304
Query: 268 HISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKPCKQDD 315
IS A++LI L D RL V E++ Q P ++D
Sbjct: 305 EISKHAKNLICAFL-TDREVRLGRNGV---------EEIKQHPFFKND 342
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 142/297 (47%), Gaps = 46/297 (15%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
Y K +G G FGV+ + +GE++A K + +D+ R E++IM KL H
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-------RFKNRELQIMRKLD-HC 78
Query: 102 NVVDLKAVY----EEEDYVHLLMELCAGGELFHRLEK-YGRFSET----EARVIFRHLMQ 152
N+V L+ + E++D V+L + L E +R+ + Y R +T ++ L +
Sbjct: 79 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 138
Query: 153 VVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAP 212
++Y H G+ HRD+KP+N+LL ++ +KL DFG A + G+ + S +Y AP
Sbjct: 139 SLAYIHSFGICHRDIKPQNLLLDPDTAV--LKLCDFGSAKQLVRGEPNVSYICSRYYRAP 196
Query: 213 EVLAGG--YNQAADVWSAGVILYILLSGMPPFWG----------------KTKSKIFDA- 253
E++ G Y + DVWSAG +L LL G P F G T+ +I +
Sbjct: 197 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 256
Query: 254 VRAADLRFP---SDPWDHI-----SASARDLIMGMLRVDPSTRLTAAEVLAHSWMEE 302
+ +FP + PW + A L +L P+ RLT E AHS+ +E
Sbjct: 257 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 313
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 142/297 (47%), Gaps = 46/297 (15%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
Y K +G G FGV+ + +GE++A K + +D+ R E++IM KL H
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-------RFKNRELQIMRKLD-HC 86
Query: 102 NVVDLKAVY----EEEDYVHLLMELCAGGELFHRLEK-YGRFSET----EARVIFRHLMQ 152
N+V L+ + E++D V+L + L E +R+ + Y R +T ++ L +
Sbjct: 87 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 146
Query: 153 VVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAP 212
++Y H G+ HRD+KP+N+LL ++ +KL DFG A + G+ + S +Y AP
Sbjct: 147 SLAYIHSFGICHRDIKPQNLLLDPDTAV--LKLCDFGSAKQLVRGEPNVSYICSRYYRAP 204
Query: 213 EVLAGG--YNQAADVWSAGVILYILLSGMPPFWG----------------KTKSKIFDA- 253
E++ G Y + DVWSAG +L LL G P F G T+ +I +
Sbjct: 205 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 264
Query: 254 VRAADLRFP---SDPWDHI-----SASARDLIMGMLRVDPSTRLTAAEVLAHSWMEE 302
+ +FP + PW + A L +L P+ RLT E AHS+ +E
Sbjct: 265 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 321
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 142/297 (47%), Gaps = 46/297 (15%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
Y K +G G FGV+ + +GE++A K + +D+ R E++IM KL H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-------RFKNRELQIMRKLD-HC 73
Query: 102 NVVDLKAVY----EEEDYVHLLMELCAGGELFHRLEK-YGRFSET----EARVIFRHLMQ 152
N+V L+ + E++D V+L + L E +R+ + Y R +T ++ L +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 153 VVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAP 212
++Y H G+ HRD+KP+N+LL ++ +KL DFG A + G+ + S +Y AP
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAV--LKLCDFGSAKQLVRGEPNVSYICSRYYRAP 191
Query: 213 EVLAGG--YNQAADVWSAGVILYILLSGMPPFWG----------------KTKSKIFDA- 253
E++ G Y + DVWSAG +L LL G P F G T+ +I +
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 251
Query: 254 VRAADLRFP---SDPWDHI-----SASARDLIMGMLRVDPSTRLTAAEVLAHSWMEE 302
+ +FP + PW + A L +L P+ RLT E AHS+ +E
Sbjct: 252 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 308
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 124/259 (47%), Gaps = 18/259 (6%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ L + +G G + + K T + A K + K+ + ED+ ++ E + + S HP
Sbjct: 7 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 66
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
+V L + ++ E + ++E GG+L +++ + E AR + ++Y H G
Sbjct: 67 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 126
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATY-IKAGQNLHGTVGSPFYIAPEVLAG-GY 219
+++RDLK +N+LL S IKL D+G+ ++ G G+P YIAPE+L G Y
Sbjct: 127 IIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDY 183
Query: 220 NQAADVWSAGVILYILLSGMPPF---------WGKTKSKIFDAVRAADLRFPSDPWDHIS 270
+ D W+ GV+++ +++G PF T+ +F + +R P +S
Sbjct: 184 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS----LS 239
Query: 271 ASARDLIMGMLRVDPSTRL 289
A ++ L DP RL
Sbjct: 240 VKAASVLKSFLNKDPKERL 258
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 124/259 (47%), Gaps = 18/259 (6%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ L + +G G + + K T + A K + K+ + ED+ ++ E + + S HP
Sbjct: 11 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 70
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
+V L + ++ E + ++E GG+L +++ + E AR + ++Y H G
Sbjct: 71 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 130
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATY-IKAGQNLHGTVGSPFYIAPEVLAG-GY 219
+++RDLK +N+LL S IKL D+G+ ++ G G+P YIAPE+L G Y
Sbjct: 131 IIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDY 187
Query: 220 NQAADVWSAGVILYILLSGMPPF---------WGKTKSKIFDAVRAADLRFPSDPWDHIS 270
+ D W+ GV+++ +++G PF T+ +F + +R P +S
Sbjct: 188 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR----SLS 243
Query: 271 ASARDLIMGMLRVDPSTRL 289
A ++ L DP RL
Sbjct: 244 VKAASVLKSFLNKDPKERL 262
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 124/259 (47%), Gaps = 18/259 (6%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ L + +G G + + K T + A + + K+ + ED+ ++ E + + S HP
Sbjct: 54 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHP 113
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
+V L + ++ E + ++E GG+L +++ + E AR + ++Y H G
Sbjct: 114 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 173
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATY-IKAGQNLHGTVGSPFYIAPEVLAG-GY 219
+++RDLK +N+LL S IKL D+G+ ++ G G+P YIAPE+L G Y
Sbjct: 174 IIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDY 230
Query: 220 NQAADVWSAGVILYILLSGMPPF---------WGKTKSKIFDAVRAADLRFPSDPWDHIS 270
+ D W+ GV+++ +++G PF T+ +F + +R P +S
Sbjct: 231 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS----LS 286
Query: 271 ASARDLIMGMLRVDPSTRL 289
A ++ L DP RL
Sbjct: 287 VKAASVLKSFLNKDPKERL 305
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 135/259 (52%), Gaps = 15/259 (5%)
Query: 47 QLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDL 106
++G G G++ ++K TG+ +A K + + + R + ++ + H NVVD+
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRK----QQRRELLFNEVVIMRDYHHDNVVDM 107
Query: 107 KAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHRD 166
+ Y D + ++ME GG L + + R +E + + +++ +SY H GV+HRD
Sbjct: 108 YSSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRD 166
Query: 167 LKPENILLATKSSSSPIKLADFGLATYI-KAGQNLHGTVGSPFYIAPEVLAG-GYNQAAD 224
+K ++ILL +S IKL+DFG + K VG+P+++APEV++ Y D
Sbjct: 167 IKSDSILL---TSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVD 223
Query: 225 VWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWD--HISASARDLIMGMLR 282
+WS G+++ ++ G PP++ + + +R + P D +S+ R + ML
Sbjct: 224 IWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDS---LPPRVKDLHKVSSVLRGFLDLMLV 280
Query: 283 VDPSTRLTAAEVLAHSWME 301
+PS R TA E+L H +++
Sbjct: 281 REPSQRATAQELLGHPFLK 299
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 126/248 (50%), Gaps = 13/248 (5%)
Query: 48 LGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH---PNVV 104
+G G FG + C TG++ A K + K R + ++ ++ L IM L P +V
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKR-IKMKQGETLALNERIMLSLVSTGDCPFIV 255
Query: 105 DLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVH 164
+ + D + +++L GG+L + L ++G FSE + R ++ + + H VV+
Sbjct: 256 CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVY 315
Query: 165 RDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAGG--YNQA 222
RDLKP NILL ++++D GLA + + H +VG+ Y+APEVL G Y+ +
Sbjct: 316 RDLKPANILL---DEHGHVRISDLGLACDF-SKKKPHASVGTHGYMAPEVLQKGVAYDSS 371
Query: 223 ADVWSAGVILYILLSGMPPF-WGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGML 281
AD +S G +L+ LL G PF KTK K + L + D S R L+ G+L
Sbjct: 372 ADWFSLGCMLFKLLRGHSPFRQHKTKDK--HEIDRMTLTMAVELPDSFSPELRSLLEGLL 429
Query: 282 RVDPSTRL 289
+ D + RL
Sbjct: 430 QRDVNRRL 437
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 126/248 (50%), Gaps = 13/248 (5%)
Query: 48 LGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH---PNVV 104
+G G FG + C TG++ A K + K R + ++ ++ L IM L P +V
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKR-IKMKQGETLALNERIMLSLVSTGDCPFIV 255
Query: 105 DLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVH 164
+ + D + +++L GG+L + L ++G FSE + R ++ + + H VV+
Sbjct: 256 CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVY 315
Query: 165 RDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAGG--YNQA 222
RDLKP NILL ++++D GLA + + H +VG+ Y+APEVL G Y+ +
Sbjct: 316 RDLKPANILL---DEHGHVRISDLGLACDF-SKKKPHASVGTHGYMAPEVLQKGVAYDSS 371
Query: 223 ADVWSAGVILYILLSGMPPF-WGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGML 281
AD +S G +L+ LL G PF KTK K + L + D S R L+ G+L
Sbjct: 372 ADWFSLGCMLFKLLRGHSPFRQHKTKDK--HEIDRMTLTMAVELPDSFSPELRSLLEGLL 429
Query: 282 RVDPSTRL 289
+ D + RL
Sbjct: 430 QRDVNRRL 437
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 131/269 (48%), Gaps = 16/269 (5%)
Query: 29 ILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIK 88
+ D + N D + + + +G G FG + T ++ A K + K + V +VR++
Sbjct: 5 VFDENEDVNF-DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVF 63
Query: 89 LEIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
E++IM L HP +V+L +++E+ + ++++L GG+L + L++ F E ++
Sbjct: 64 KELQIMQGLE-HPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFIC 122
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
L+ + Y ++HRD+KP+NILL + + DF +A + + G+
Sbjct: 123 ELVMALDYLQNQRIIHRDMKPDNILL---DEHGHVHITDFNIAAMLPRETQITTMAGTKP 179
Query: 209 YIAPEVLA----GGYNQAADVWSAGVILYILLSGMPPFWGKTKS---KIFDAVRAADLRF 261
Y+APE+ + GY+ A D WS GV Y LL G P+ ++ + +I + +
Sbjct: 180 YMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTY 239
Query: 262 PSDPWDHISASARDLIMGMLRVDPSTRLT 290
PS W S L+ +L +P R +
Sbjct: 240 PS-AW---SQEMVSLLKKLLEPNPDQRFS 264
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 126/248 (50%), Gaps = 13/248 (5%)
Query: 48 LGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH---PNVV 104
+G G FG + C TG++ A K + K R + ++ ++ L IM L P +V
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKR-IKMKQGETLALNERIMLSLVSTGDCPFIV 255
Query: 105 DLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVH 164
+ + D + +++L GG+L + L ++G FSE + R ++ + + H VV+
Sbjct: 256 CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVY 315
Query: 165 RDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAGG--YNQA 222
RDLKP NILL ++++D GLA + + H +VG+ Y+APEVL G Y+ +
Sbjct: 316 RDLKPANILL---DEHGHVRISDLGLACDF-SKKKPHASVGTHGYMAPEVLQKGVAYDSS 371
Query: 223 ADVWSAGVILYILLSGMPPF-WGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGML 281
AD +S G +L+ LL G PF KTK K + L + D S R L+ G+L
Sbjct: 372 ADWFSLGCMLFKLLRGHSPFRQHKTKDK--HEIDRMTLTMAVELPDSFSPELRSLLEGLL 429
Query: 282 RVDPSTRL 289
+ D + RL
Sbjct: 430 QRDVNRRL 437
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 126/248 (50%), Gaps = 13/248 (5%)
Query: 48 LGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH---PNVV 104
+G G FG + C TG++ A K + K R + ++ ++ L IM L P +V
Sbjct: 196 IGRGGFGEVYGCRKADTGKMYAMKCLDKKR-IKMKQGETLALNERIMLSLVSTGDCPFIV 254
Query: 105 DLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVH 164
+ + D + +++L GG+L + L ++G FSE + R ++ + + H VV+
Sbjct: 255 CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVY 314
Query: 165 RDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAGG--YNQA 222
RDLKP NILL ++++D GLA + + H +VG+ Y+APEVL G Y+ +
Sbjct: 315 RDLKPANILL---DEHGHVRISDLGLACDF-SKKKPHASVGTHGYMAPEVLQKGVAYDSS 370
Query: 223 ADVWSAGVILYILLSGMPPF-WGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGML 281
AD +S G +L+ LL G PF KTK K + L + D S R L+ G+L
Sbjct: 371 ADWFSLGCMLFKLLRGHSPFRQHKTKDK--HEIDRMTLTMAVELPDSFSPELRSLLEGLL 428
Query: 282 RVDPSTRL 289
+ D + RL
Sbjct: 429 QRDVNRRL 436
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 138/293 (47%), Gaps = 15/293 (5%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
++YV +++G G FG G K I R+ + E S + E+ ++ +
Sbjct: 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREES-RREVAVLANMK- 81
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRL--EKYGRFSETEARVIFRHLMQVVSYC 157
HPN+V + +EE ++++M+ C GG+LF R+ +K F E + F + + +
Sbjct: 82 HPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHV 141
Query: 158 HGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNL-HGTVGSPFYIAPEVLA 216
H ++HRD+K +NI L + ++L DFG+A + + L +G+P+Y++PE+
Sbjct: 142 HDRKILHRDIKSQNIFLTKDGT---VQLGDFGIARVLNSTVELARACIGTPYYLSPEICE 198
Query: 217 GG-YNQAADVWSAGVILYILLSGMPPF-WGKTKSKIFDAVRAADLRFPSDPWDHISASAR 274
YN +D+W+ G +LY L + F G K+ + + + FP H S R
Sbjct: 199 NKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGS---FPPVSL-HYSYDLR 254
Query: 275 DLIMGMLRVDPSTRLTAAEVLAHSWM-EECEQVAQKPCKQDDLCCKQLEVGGS 326
L+ + + +P R + +L ++ + E+ ++ C K GS
Sbjct: 255 SLVSQLFKRNPRDRPSVNSILEKGFIAKRIEKFLSPQLIAEEFCLKTFSKFGS 307
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 137/276 (49%), Gaps = 16/276 (5%)
Query: 33 TQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIE 92
T+ N D + + +LG G FG + + +K T + A K I + E++ +EI+
Sbjct: 30 TRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEID 86
Query: 93 IMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGR-FSETEARVIFRHLM 151
I+ HPN+V L + E+ + +L+E CAGG + + + R +E++ +V+ + +
Sbjct: 87 ILASCD-HPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTL 145
Query: 152 QVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGL-ATYIKAGQNLHGTVGSPFYI 210
++Y H N ++HRDLK NIL IKLADFG+ A + Q +G+P+++
Sbjct: 146 DALNYLHDNKIIHRDLKAGNILFTLDGD---IKLADFGVSAKNTRTIQRRDSFIGTPYWM 202
Query: 211 APEVLA------GGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSD 264
APEV+ Y+ ADVWS G+ L + PP ++ + ++ +
Sbjct: 203 APEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQ 262
Query: 265 PWDHISASARDLIMGMLRVDPSTRLTAAEVLAHSWM 300
P S++ +D + L + R T +++L H ++
Sbjct: 263 P-SRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFV 297
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 137/276 (49%), Gaps = 16/276 (5%)
Query: 33 TQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIE 92
T+ N D + + +LG G FG + + +K T + A K I + E++ +EI+
Sbjct: 30 TRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEID 86
Query: 93 IMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGR-FSETEARVIFRHLM 151
I+ HPN+V L + E+ + +L+E CAGG + + + R +E++ +V+ + +
Sbjct: 87 ILASCD-HPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTL 145
Query: 152 QVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGL-ATYIKAGQNLHGTVGSPFYI 210
++Y H N ++HRDLK NIL IKLADFG+ A + Q +G+P+++
Sbjct: 146 DALNYLHDNKIIHRDLKAGNILFTLDGD---IKLADFGVSAKNTRXIQRRDSFIGTPYWM 202
Query: 211 APEVLA------GGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSD 264
APEV+ Y+ ADVWS G+ L + PP ++ + ++ +
Sbjct: 203 APEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQ 262
Query: 265 PWDHISASARDLIMGMLRVDPSTRLTAAEVLAHSWM 300
P S++ +D + L + R T +++L H ++
Sbjct: 263 P-SRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFV 297
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 143/295 (48%), Gaps = 46/295 (15%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKL-EIEIMTKLSGHPNVV 104
+++G G +GV+ + +K TGEV+A K I D E V S + EI ++ +L+ HPN+V
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELN-HPNIV 67
Query: 105 DLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEA------RVIFRHLMQVVSYCH 158
L V E+ ++L+ E L L+K+ S + L+Q +++CH
Sbjct: 68 KLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 159 GNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAG-QNLHGTVGSPFYIAPEVLAG 217
+ V+HRDLKPEN+L+ T+ + IKLADFGLA + V + +Y APE+L G
Sbjct: 123 SHRVLHRDLKPENLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 179
Query: 218 --GYNQAADVWSAGVILYILLSGMPPFWGKTK----SKIFDAVRAADLRF---------- 261
Y+ A D+WS G I +++ F G ++ +IF + D
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 239
Query: 262 -PSDP-WDH---------ISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQ 305
PS P W + R L+ ML DP+ R++A LAH + ++ +
Sbjct: 240 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 294
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 135/275 (49%), Gaps = 16/275 (5%)
Query: 29 ILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIK 88
++D L D YV ++G G G++ +K +G +A K + + + R +
Sbjct: 37 VVDQGDPRLLLDSYV---KIGEGSTGIVCLAREKHSGRQVAVKMMDLRK----QQRRELL 89
Query: 89 LEIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
++ + H NVV++ Y + + +LME GG L + + R +E + +
Sbjct: 90 FNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV-RLNEEQIATVCE 148
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYI-KAGQNLHGTVGSP 207
++Q ++Y H GV+HRD+K ++ILL +KL+DFG I K VG+P
Sbjct: 149 AVLQALAYLHAQGVIHRDIKSDSILLTLDGR---VKLSDFGFCAQISKDVPKRKXLVGTP 205
Query: 208 FYIAPEVLAGG-YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
+++APEV++ Y D+WS G+++ ++ G PP++ + + +R D P
Sbjct: 206 YWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLR--DSPPPKLKN 263
Query: 267 DH-ISASARDLIMGMLRVDPSTRLTAAEVLAHSWM 300
H +S RD + ML DP R TA E+L H ++
Sbjct: 264 SHKVSPVLRDFLERMLVRDPQERATAQELLDHPFL 298
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 143/295 (48%), Gaps = 46/295 (15%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKL-EIEIMTKLSGHPNVV 104
+++G G +GV+ + +K TGEV+A K I D E V S + EI ++ +L+ HPN+V
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELN-HPNIV 66
Query: 105 DLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEA------RVIFRHLMQVVSYCH 158
L V E+ ++L+ E L L+K+ S + L+Q +++CH
Sbjct: 67 KLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 159 GNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAG-QNLHGTVGSPFYIAPEVLAG 217
+ V+HRDLKPEN+L+ T+ + IKLADFGLA + V + +Y APE+L G
Sbjct: 122 SHRVLHRDLKPENLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 178
Query: 218 --GYNQAADVWSAGVILYILLSGMPPFWGKTK----SKIFDAVRAADLRF---------- 261
Y+ A D+WS G I +++ F G ++ +IF + D
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 238
Query: 262 -PSDP-WDH---------ISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQ 305
PS P W + R L+ ML DP+ R++A LAH + ++ +
Sbjct: 239 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 293
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 143/295 (48%), Gaps = 46/295 (15%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKL-EIEIMTKLSGHPNVV 104
+++G G +GV+ + +K TGEV+A K I D E V S + EI ++ +L+ HPN+V
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELN-HPNIV 65
Query: 105 DLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEA------RVIFRHLMQVVSYCH 158
L V E+ ++L+ E L L+K+ S + L+Q +S+CH
Sbjct: 66 KLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCH 120
Query: 159 GNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHG-TVGSPFYIAPEVLAG 217
+ V+HRDLKP+N+L+ T+ + IKLADFGLA + V + +Y APE+L G
Sbjct: 121 SHRVLHRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 177
Query: 218 --GYNQAADVWSAGVILYILLSGMPPFWGKTK----SKIFDAVRAADLRF---------- 261
Y+ A D+WS G I +++ F G ++ +IF + D
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 262 -PSDP-WDH---------ISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQ 305
PS P W + R L+ ML DP+ R++A LAH + ++ +
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 137/276 (49%), Gaps = 16/276 (5%)
Query: 33 TQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIE 92
T+ N D + + +LG G FG + + +K T + A K I + E++ +EI+
Sbjct: 30 TRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEID 86
Query: 93 IMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGR-FSETEARVIFRHLM 151
I+ HPN+V L + E+ + +L+E CAGG + + + R +E++ +V+ + +
Sbjct: 87 ILAS-CDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTL 145
Query: 152 QVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGL-ATYIKAGQNLHGTVGSPFYI 210
++Y H N ++HRDLK NIL IKLADFG+ A + Q +G+P+++
Sbjct: 146 DALNYLHDNKIIHRDLKAGNILFTLDGD---IKLADFGVSAKNTRXIQRRDXFIGTPYWM 202
Query: 211 APEVLA------GGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSD 264
APEV+ Y+ ADVWS G+ L + PP ++ + ++ +
Sbjct: 203 APEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQ 262
Query: 265 PWDHISASARDLIMGMLRVDPSTRLTAAEVLAHSWM 300
P S++ +D + L + R T +++L H ++
Sbjct: 263 P-SRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFV 297
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 142/291 (48%), Gaps = 49/291 (16%)
Query: 48 LGWGQFGVIRECSDKFTGEVLACKSIAK---DRLVTVEDVRSIKLEIEIMTKLSGHPNVV 104
+G G +G++ +C +K TG ++A K + D++V +R IKL K H N+V
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKL-----LKQLRHENLV 87
Query: 105 DLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVS---YCHGNG 161
+L V +++ +L+ E + LE + + + +V+ ++L Q+++ +CH +
Sbjct: 88 NLLEVCKKKKRWYLVFEF-VDHTILDDLELFP--NGLDYQVVQKYLFQIINGIGFCHSHN 144
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKA-GQNLHGTVGSPFYIAPEVLAGG-- 218
++HRD+KPENIL+ S S +KL DFG A + A G+ V + +Y APE+L G
Sbjct: 145 IIHRDIKPENILV---SQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVK 201
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKT------------------------KSKIFDAV 254
Y +A DVW+ G ++ + G P F G + K+ +F V
Sbjct: 202 YGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGV 261
Query: 255 RAADLRFPSDP----WDHISASARDLIMGMLRVDPSTRLTAAEVLAHSWME 301
R +++ +P + +S DL L +DP R AE+L H + +
Sbjct: 262 RLPEIK-EREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQ 311
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 143/295 (48%), Gaps = 46/295 (15%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKL-EIEIMTKLSGHPNVV 104
+++G G +GV+ + +K TGEV+A K I D E V S + EI ++ +L+ HPN+V
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELN-HPNIV 66
Query: 105 DLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEA------RVIFRHLMQVVSYCH 158
L V E+ ++L+ E + L+K+ S + L+Q +++CH
Sbjct: 67 KLLDVIHTENKLYLVFEFLSMD-----LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 159 GNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAG-QNLHGTVGSPFYIAPEVLAG 217
+ V+HRDLKPEN+L+ T+ + IKLADFGLA + V + +Y APE+L G
Sbjct: 122 SHRVLHRDLKPENLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 178
Query: 218 --GYNQAADVWSAGVILYILLSGMPPFWGKTK----SKIFDAVRAADLRF---------- 261
Y+ A D+WS G I +++ F G ++ +IF + D
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 238
Query: 262 -PSDP-WDH---------ISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQ 305
PS P W + R L+ ML DP+ R++A LAH + ++ +
Sbjct: 239 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 293
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 143/295 (48%), Gaps = 46/295 (15%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKL-EIEIMTKLSGHPNVV 104
+++G G +GV+ + +K TGEV+A K I D E V S + EI ++ +L+ HPN+V
Sbjct: 16 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELN-HPNIV 72
Query: 105 DLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEA------RVIFRHLMQVVSYCH 158
L V E+ ++L+ E L L+K+ S + L+Q +++CH
Sbjct: 73 KLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 127
Query: 159 GNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHG-TVGSPFYIAPEVLAG 217
+ V+HRDLKP+N+L+ T+ + IKLADFGLA + V + +Y APE+L G
Sbjct: 128 SHRVLHRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 184
Query: 218 G--YNQAADVWSAGVILYILLSGMPPFWGKTK----SKIFDAVRAADLRF---------- 261
Y+ A D+WS G I +++ F G ++ +IF + D
Sbjct: 185 XKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 244
Query: 262 -PSDP-WDH---------ISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQ 305
PS P W + R L+ ML DP+ R++A LAH + ++ +
Sbjct: 245 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 299
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 140/297 (47%), Gaps = 46/297 (15%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
Y K +G G FGV+ + +GE++A K + + + E++IM KL H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK-------NRELQIMRKLD-HC 73
Query: 102 NVVDLKAVY----EEEDYVHLLMELCAGGELFHRLEK-YGRFSET----EARVIFRHLMQ 152
N+V L+ + E++D V+L + L E +R+ + Y R +T ++ L +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 153 VVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAP 212
++Y H G+ HRD+KP+N+LL ++ +KL DFG A + G+ + S +Y AP
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAV--LKLCDFGSAKQLVRGEPNVSYICSRYYRAP 191
Query: 213 EVLAGG--YNQAADVWSAGVILYILLSGMPPFWG----------------KTKSKIFDA- 253
E++ G Y + DVWSAG +L LL G P F G T+ +I +
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 251
Query: 254 VRAADLRFP---SDPWDHI-----SASARDLIMGMLRVDPSTRLTAAEVLAHSWMEE 302
+ +FP + PW + A L +L P+ RLT E AHS+ +E
Sbjct: 252 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 308
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 143/295 (48%), Gaps = 46/295 (15%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKL-EIEIMTKLSGHPNVV 104
+++G G +GV+ + +K TGEV+A K I D E V S + EI ++ +L+ HPN+V
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELN-HPNIV 68
Query: 105 DLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEA------RVIFRHLMQVVSYCH 158
L V E+ ++L+ E + L+K+ S + L+Q +++CH
Sbjct: 69 KLLDVIHTENKLYLVFEFLSMD-----LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 159 GNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAG-QNLHGTVGSPFYIAPEVLAG 217
+ V+HRDLKPEN+L+ T+ + IKLADFGLA + V + +Y APE+L G
Sbjct: 124 SHRVLHRDLKPENLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 180
Query: 218 --GYNQAADVWSAGVILYILLSGMPPFWGKTK----SKIFDAVRAADLRF---------- 261
Y+ A D+WS G I +++ F G ++ +IF + D
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 240
Query: 262 -PSDP-WDH---------ISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQ 305
PS P W + R L+ ML DP+ R++A LAH + ++ +
Sbjct: 241 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 295
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 143/295 (48%), Gaps = 46/295 (15%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKL-EIEIMTKLSGHPNVV 104
+++G G +GV+ + +K TGEV+A K I D E V S + EI ++ +L+ HPN+V
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELN-HPNIV 65
Query: 105 DLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEA------RVIFRHLMQVVSYCH 158
L V E+ ++L+ E L L+K+ S + L+Q +++CH
Sbjct: 66 KLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 159 GNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAG-QNLHGTVGSPFYIAPEVLAG 217
+ V+HRDLKP+N+L+ T+ + IKLADFGLA + V + +Y APE+L G
Sbjct: 121 SHRVLHRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 177
Query: 218 --GYNQAADVWSAGVILYILLSGMPPFWGKTK----SKIFDAVRAADLRF---------- 261
Y+ A D+WS G I +++ F G ++ +IF + D
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 262 -PSDP-WDH---------ISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQ 305
PS P W + R L+ ML DP+ R++A LAH + ++ +
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 143/295 (48%), Gaps = 46/295 (15%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKL-EIEIMTKLSGHPNVV 104
+++G G +GV+ + +K TGEV+A K I D E V S + EI ++ +L+ HPN+V
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELN-HPNIV 65
Query: 105 DLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEA------RVIFRHLMQVVSYCH 158
L V E+ ++L+ E L L+K+ S + L+Q +++CH
Sbjct: 66 KLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 159 GNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHG-TVGSPFYIAPEVLAG 217
+ V+HRDLKP+N+L+ T+ + IKLADFGLA + V + +Y APE+L G
Sbjct: 121 SHRVLHRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 177
Query: 218 G--YNQAADVWSAGVILYILLSGMPPFWGKTK----SKIFDAVRAADLRF---------- 261
Y+ A D+WS G I +++ F G ++ +IF + D
Sbjct: 178 XKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 262 -PSDP-WDH---------ISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQ 305
PS P W + R L+ ML DP+ R++A LAH + ++ +
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 143/295 (48%), Gaps = 46/295 (15%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKL-EIEIMTKLSGHPNVV 104
+++G G +GV+ + +K TGEV+A K I D E V S + EI ++ +L+ HPN+V
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELN-HPNIV 64
Query: 105 DLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEA------RVIFRHLMQVVSYCH 158
L V E+ ++L+ E L L+K+ S + L+Q +++CH
Sbjct: 65 KLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 159 GNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAG-QNLHGTVGSPFYIAPEVLAG 217
+ V+HRDLKP+N+L+ T+ + IKLADFGLA + V + +Y APE+L G
Sbjct: 120 SHRVLHRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 176
Query: 218 --GYNQAADVWSAGVILYILLSGMPPFWGKTK----SKIFDAVRAADLRF---------- 261
Y+ A D+WS G I +++ F G ++ +IF + D
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236
Query: 262 -PSDP-WDH---------ISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQ 305
PS P W + R L+ ML DP+ R++A LAH + ++ +
Sbjct: 237 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 143/295 (48%), Gaps = 46/295 (15%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKL-EIEIMTKLSGHPNVV 104
+++G G +GV+ + +K TGEV+A K I D E V S + EI ++ +L+ HPN+V
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELN-HPNIV 65
Query: 105 DLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEA------RVIFRHLMQVVSYCH 158
L V E+ ++L+ E L L+K+ S + L+Q +++CH
Sbjct: 66 KLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 159 GNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAG-QNLHGTVGSPFYIAPEVLAG 217
+ V+HRDLKP+N+L+ T+ + IKLADFGLA + V + +Y APE+L G
Sbjct: 121 SHRVLHRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 177
Query: 218 --GYNQAADVWSAGVILYILLSGMPPFWGKTK----SKIFDAVRAADLRF---------- 261
Y+ A D+WS G I +++ F G ++ +IF + D
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 262 -PSDP-WDH---------ISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQ 305
PS P W + R L+ ML DP+ R++A LAH + ++ +
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 143/295 (48%), Gaps = 46/295 (15%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKL-EIEIMTKLSGHPNVV 104
+++G G +GV+ + +K TGEV+A K I D E V S + EI ++ +L+ HPN+V
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELN-HPNIV 64
Query: 105 DLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEA------RVIFRHLMQVVSYCH 158
L V E+ ++L+ E L L+K+ S + L+Q +++CH
Sbjct: 65 KLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 159 GNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHG-TVGSPFYIAPEVLAG 217
+ V+HRDLKP+N+L+ T+ + IKLADFGLA + V + +Y APE+L G
Sbjct: 120 SHRVLHRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 176
Query: 218 --GYNQAADVWSAGVILYILLSGMPPFWGKTK----SKIFDAVRAADLRF---------- 261
Y+ A D+WS G I +++ F G ++ +IF + D
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236
Query: 262 -PSDP-WDH---------ISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQ 305
PS P W + R L+ ML DP+ R++A LAH + ++ +
Sbjct: 237 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 143/295 (48%), Gaps = 46/295 (15%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKL-EIEIMTKLSGHPNVV 104
+++G G +GV+ + +K TGEV+A K I D E V S + EI ++ +L+ HPN+V
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELN-HPNIV 65
Query: 105 DLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEA------RVIFRHLMQVVSYCH 158
L V E+ ++L+ E L L+K+ S + L+Q +++CH
Sbjct: 66 KLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 159 GNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAG-QNLHGTVGSPFYIAPEVLAG 217
+ V+HRDLKP+N+L+ T+ + IKLADFGLA + V + +Y APE+L G
Sbjct: 121 SHRVLHRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 177
Query: 218 --GYNQAADVWSAGVILYILLSGMPPFWGKTK----SKIFDAVRAADLRF---------- 261
Y+ A D+WS G I +++ F G ++ +IF + D
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 262 -PSDP-WDH---------ISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQ 305
PS P W + R L+ ML DP+ R++A LAH + ++ +
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 143/295 (48%), Gaps = 46/295 (15%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKL-EIEIMTKLSGHPNVV 104
+++G G +GV+ + +K TGEV+A K I D E V S + EI ++ +L+ HPN+V
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELN-HPNIV 67
Query: 105 DLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEA------RVIFRHLMQVVSYCH 158
L V E+ ++L+ E L L+K+ S + L+Q +++CH
Sbjct: 68 KLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 159 GNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAG-QNLHGTVGSPFYIAPEVLAG 217
+ V+HRDLKP+N+L+ T+ + IKLADFGLA + V + +Y APE+L G
Sbjct: 123 SHRVLHRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 179
Query: 218 --GYNQAADVWSAGVILYILLSGMPPFWGKTK----SKIFDAVRAADLRF---------- 261
Y+ A D+WS G I +++ F G ++ +IF + D
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 239
Query: 262 -PSDP-WDH---------ISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQ 305
PS P W + R L+ ML DP+ R++A LAH + ++ +
Sbjct: 240 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 294
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 143/295 (48%), Gaps = 46/295 (15%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKL-EIEIMTKLSGHPNVV 104
+++G G +GV+ + +K TGEV+A K I D E V S + EI ++ +L+ HPN+V
Sbjct: 16 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELN-HPNIV 72
Query: 105 DLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEA------RVIFRHLMQVVSYCH 158
L V E+ ++L+ E L L+K+ S + L+Q +++CH
Sbjct: 73 KLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 127
Query: 159 GNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHG-TVGSPFYIAPEVLAG 217
+ V+HRDLKP+N+L+ T+ + IKLADFGLA + V + +Y APE+L G
Sbjct: 128 SHRVLHRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 184
Query: 218 --GYNQAADVWSAGVILYILLSGMPPFWGKTK----SKIFDAVRAADLRF---------- 261
Y+ A D+WS G I +++ F G ++ +IF + D
Sbjct: 185 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 244
Query: 262 -PSDP-WDH---------ISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQ 305
PS P W + R L+ ML DP+ R++A LAH + ++ +
Sbjct: 245 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 299
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 143/295 (48%), Gaps = 46/295 (15%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKL-EIEIMTKLSGHPNVV 104
+++G G +GV+ + +K TGEV+A K I D E V S + EI ++ +L+ HPN+V
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELN-HPNIV 66
Query: 105 DLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEA------RVIFRHLMQVVSYCH 158
L V E+ ++L+ E L L+K+ S + L+Q +++CH
Sbjct: 67 KLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 159 GNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHG-TVGSPFYIAPEVLAG 217
+ V+HRDLKP+N+L+ T+ + IKLADFGLA + V + +Y APE+L G
Sbjct: 122 SHRVLHRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 178
Query: 218 --GYNQAADVWSAGVILYILLSGMPPFWGKTK----SKIFDAVRAADLRF---------- 261
Y+ A D+WS G I +++ F G ++ +IF + D
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 238
Query: 262 -PSDP-WDH---------ISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQ 305
PS P W + R L+ ML DP+ R++A LAH + ++ +
Sbjct: 239 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 293
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 143/295 (48%), Gaps = 46/295 (15%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKL-EIEIMTKLSGHPNVV 104
+++G G +GV+ + +K TGEV+A K I D E V S + EI ++ +L+ HPN+V
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELN-HPNIV 64
Query: 105 DLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEA------RVIFRHLMQVVSYCH 158
L V E+ ++L+ E L L+K+ S + L+Q +++CH
Sbjct: 65 KLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 159 GNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAG-QNLHGTVGSPFYIAPEVLAG 217
+ V+HRDLKP+N+L+ T+ + IKLADFGLA + V + +Y APE+L G
Sbjct: 120 SHRVLHRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 176
Query: 218 --GYNQAADVWSAGVILYILLSGMPPFWGKTK----SKIFDAVRAADLRF---------- 261
Y+ A D+WS G I +++ F G ++ +IF + D
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236
Query: 262 -PSDP-WDH---------ISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQ 305
PS P W + R L+ ML DP+ R++A LAH + ++ +
Sbjct: 237 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 142/292 (48%), Gaps = 46/292 (15%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKL-EIEIMTKLSGHPNVV 104
+++G G +GV+ + +K TGEV+A K I D E V S + EI ++ +L+ HPN+V
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELN-HPNIV 65
Query: 105 DLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEA------RVIFRHLMQVVSYCH 158
L V E+ ++L+ E L L+K+ S + L+Q +++CH
Sbjct: 66 KLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 159 GNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAG-QNLHGTVGSPFYIAPEVLAG 217
+ V+HRDLKP+N+L+ T+ + IKLADFGLA + V + +Y APE+L G
Sbjct: 121 SHRVLHRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 177
Query: 218 --GYNQAADVWSAGVILYILLSGMPPFWGKTK----SKIFDAVRAADLRF---------- 261
Y+ A D+WS G I +++ F G ++ +IF + D
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 262 -PSDP-WDH---------ISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEE 302
PS P W + R L+ ML DP+ R++A LAH + ++
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 143/295 (48%), Gaps = 46/295 (15%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKL-EIEIMTKLSGHPNVV 104
+++G G +GV+ + +K TGEV+A K I D E V S + EI ++ +L+ HPN+V
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELN-HPNIV 66
Query: 105 DLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEA------RVIFRHLMQVVSYCH 158
L V E+ ++L+ E L L+K+ S + L+Q +++CH
Sbjct: 67 KLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 159 GNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAG-QNLHGTVGSPFYIAPEVLAG 217
+ V+HRDLKP+N+L+ T+ + IKLADFGLA + V + +Y APE+L G
Sbjct: 122 SHRVLHRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 178
Query: 218 --GYNQAADVWSAGVILYILLSGMPPFWGKTK----SKIFDAVRAADLRF---------- 261
Y+ A D+WS G I +++ F G ++ +IF + D
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 238
Query: 262 -PSDP-WDH---------ISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQ 305
PS P W + R L+ ML DP+ R++A LAH + ++ +
Sbjct: 239 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 293
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 143/295 (48%), Gaps = 46/295 (15%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKL-EIEIMTKLSGHPNVV 104
+++G G +GV+ + +K TGEV+A K I D E V S + EI ++ +L+ HPN+V
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELN-HPNIV 66
Query: 105 DLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEA------RVIFRHLMQVVSYCH 158
L V E+ ++L+ E L L+K+ S + L+Q +++CH
Sbjct: 67 KLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 159 GNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAG-QNLHGTVGSPFYIAPEVLAG 217
+ V+HRDLKP+N+L+ T+ + IKLADFGLA + V + +Y APE+L G
Sbjct: 122 SHRVLHRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 178
Query: 218 --GYNQAADVWSAGVILYILLSGMPPFWGKTK----SKIFDAVRAADLRF---------- 261
Y+ A D+WS G I +++ F G ++ +IF + D
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 238
Query: 262 -PSDP-WDH---------ISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQ 305
PS P W + R L+ ML DP+ R++A LAH + ++ +
Sbjct: 239 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 293
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 144/324 (44%), Gaps = 58/324 (17%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAK--DRLVTVEDVRSIKLEIE 92
+ N+S + L LG G +GV+ + K TGE++A K I L + +R IK+
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKI--- 62
Query: 93 IMTKLSGHPNVVDLKAV-----YEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIF 147
K H N++ + + +E + V+++ EL HR+ S+ +
Sbjct: 63 --LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFI 118
Query: 148 RHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYI--KAGQNLHGT-- 203
++ V HG+ V+HRDLKP N+L+ +S+ +K+ DFGLA I A N T
Sbjct: 119 YQTLRAVKVLHGSNVIHRDLKPSNLLI---NSNCDLKVCDFGLARIIDESAADNSEPTGQ 175
Query: 204 -------VGSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGKTKSK----I 250
V + +Y APEV+ + Y++A DVWS G IL L P F G+ I
Sbjct: 176 QSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLI 235
Query: 251 FDAVRAA----DLR----------------FPSDP----WDHISASARDLIMGMLRVDPS 286
F + DLR +P+ P + ++ DL+ ML DP+
Sbjct: 236 FGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPA 295
Query: 287 TRLTAAEVLAHSWMEECEQVAQKP 310
R+TA E L H +++ +P
Sbjct: 296 KRITAKEALEHPYLQTYHDPNDEP 319
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 143/295 (48%), Gaps = 46/295 (15%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKL-EIEIMTKLSGHPNVV 104
+++G G +GV+ + +K TGEV+A K I D E V S + EI ++ +L+ HPN+V
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELN-HPNIV 68
Query: 105 DLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEA------RVIFRHLMQVVSYCH 158
L V E+ ++L+ E L L+K+ S + L+Q +++CH
Sbjct: 69 KLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 159 GNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAG-QNLHGTVGSPFYIAPEVLAG 217
+ V+HRDLKP+N+L+ T+ + IKLADFGLA + V + +Y APE+L G
Sbjct: 124 SHRVLHRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 180
Query: 218 --GYNQAADVWSAGVILYILLSGMPPFWGKTK----SKIFDAVRAADLRF---------- 261
Y+ A D+WS G I +++ F G ++ +IF + D
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 240
Query: 262 -PSDP-WDH---------ISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQ 305
PS P W + R L+ ML DP+ R++A LAH + ++ +
Sbjct: 241 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 295
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 143/295 (48%), Gaps = 46/295 (15%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKL-EIEIMTKLSGHPNVV 104
+++G G +GV+ + +K TGEV+A K I D E V S + EI ++ +L+ HPN+V
Sbjct: 13 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELN-HPNIV 69
Query: 105 DLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEA------RVIFRHLMQVVSYCH 158
L V E+ ++L+ E L L+K+ S + L+Q +++CH
Sbjct: 70 KLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 124
Query: 159 GNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAG-QNLHGTVGSPFYIAPEVLAG 217
+ V+HRDLKP+N+L+ T+ + IKLADFGLA + V + +Y APE+L G
Sbjct: 125 SHRVLHRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 181
Query: 218 --GYNQAADVWSAGVILYILLSGMPPFWGKTK----SKIFDAVRAADLRF---------- 261
Y+ A D+WS G I +++ F G ++ +IF + D
Sbjct: 182 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 241
Query: 262 -PSDP-WDH---------ISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQ 305
PS P W + R L+ ML DP+ R++A LAH + ++ +
Sbjct: 242 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 296
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 143/295 (48%), Gaps = 46/295 (15%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKL-EIEIMTKLSGHPNVV 104
+++G G +GV+ + +K TGEV+A K I D E V S + EI ++ +L+ HPN+V
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELN-HPNIV 65
Query: 105 DLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEA------RVIFRHLMQVVSYCH 158
L V E+ ++L+ E L L+K+ S + L+Q +++CH
Sbjct: 66 KLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 159 GNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHG-TVGSPFYIAPEVLAG 217
+ V+HRDLKP+N+L+ T+ + IKLADFGLA + V + +Y APE+L G
Sbjct: 121 SHRVLHRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 177
Query: 218 --GYNQAADVWSAGVILYILLSGMPPFWGKTK----SKIFDAVRAADLRF---------- 261
Y+ A D+WS G I +++ F G ++ +IF + D
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 262 -PSDP-WDH---------ISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQ 305
PS P W + R L+ ML DP+ R++A LAH + ++ +
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 143/295 (48%), Gaps = 46/295 (15%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKL-EIEIMTKLSGHPNVV 104
+++G G +GV+ + +K TGEV+A K I D E V S + EI ++ +L+ HPN+V
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELN-HPNIV 64
Query: 105 DLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEA------RVIFRHLMQVVSYCH 158
L V E+ ++L+ E L L+K+ S + L+Q +++CH
Sbjct: 65 KLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 159 GNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHG-TVGSPFYIAPEVLAG 217
+ V+HRDLKP+N+L+ T+ + IKLADFGLA + V + +Y APE+L G
Sbjct: 120 SHRVLHRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 176
Query: 218 --GYNQAADVWSAGVILYILLSGMPPFWGKTK----SKIFDAVRAADLRF---------- 261
Y+ A D+WS G I +++ F G ++ +IF + D
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236
Query: 262 -PSDP-WDH---------ISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQ 305
PS P W + R L+ ML DP+ R++A LAH + ++ +
Sbjct: 237 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 144/324 (44%), Gaps = 58/324 (17%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAK--DRLVTVEDVRSIKLEIE 92
+ N+S + L LG G +GV+ + K TGE++A K I L + +R IK+
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKI--- 62
Query: 93 IMTKLSGHPNVVDLKAV-----YEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIF 147
K H N++ + + +E + V+++ EL HR+ S+ +
Sbjct: 63 --LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFI 118
Query: 148 RHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYI--KAGQNLHGT-- 203
++ V HG+ V+HRDLKP N+L+ +S+ +K+ DFGLA I A N T
Sbjct: 119 YQTLRAVKVLHGSNVIHRDLKPSNLLI---NSNCDLKVCDFGLARIIDESAADNSEPTGQ 175
Query: 204 -------VGSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGKTKSK----I 250
V + +Y APEV+ + Y++A DVWS G IL L P F G+ I
Sbjct: 176 QSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLI 235
Query: 251 FDAVRAA----DLR----------------FPSDP----WDHISASARDLIMGMLRVDPS 286
F + DLR +P+ P + ++ DL+ ML DP+
Sbjct: 236 FGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPA 295
Query: 287 TRLTAAEVLAHSWMEECEQVAQKP 310
R+TA E L H +++ +P
Sbjct: 296 KRITAKEALEHPYLQTYHDPNDEP 319
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 143/295 (48%), Gaps = 46/295 (15%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKL-EIEIMTKLSGHPNVV 104
+++G G +GV+ + +K TGEV+A K I D E V S + EI ++ +L+ HPN+V
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELN-HPNIV 65
Query: 105 DLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEA------RVIFRHLMQVVSYCH 158
L V E+ ++L+ E L L+K+ S + L+Q +++CH
Sbjct: 66 KLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 159 GNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHG-TVGSPFYIAPEVLAG 217
+ V+HRDLKP+N+L+ T+ + IKLADFGLA + V + +Y APE+L G
Sbjct: 121 SHRVLHRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 177
Query: 218 --GYNQAADVWSAGVILYILLSGMPPFWGKTK----SKIFDAVRAADLRF---------- 261
Y+ A D+WS G I +++ F G ++ +IF + D
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 262 -PSDP-WDH---------ISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQ 305
PS P W + R L+ ML DP+ R++A LAH + ++ +
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 144/324 (44%), Gaps = 58/324 (17%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAK--DRLVTVEDVRSIKLEIE 92
+ N+S + L LG G +GV+ + K TGE++A K I L + +R IK+
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKI--- 62
Query: 93 IMTKLSGHPNVVDLKAV-----YEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIF 147
K H N++ + + +E + V+++ EL HR+ S+ +
Sbjct: 63 --LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFI 118
Query: 148 RHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYI--KAGQNLHGT-- 203
++ V HG+ V+HRDLKP N+L+ +S+ +K+ DFGLA I A N T
Sbjct: 119 YQTLRAVKVLHGSNVIHRDLKPSNLLI---NSNCDLKVCDFGLARIIDESAADNSEPTGQ 175
Query: 204 -------VGSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGKTKSK----I 250
V + +Y APEV+ + Y++A DVWS G IL L P F G+ I
Sbjct: 176 QSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLI 235
Query: 251 FDAVRAA----DLR----------------FPSDP----WDHISASARDLIMGMLRVDPS 286
F + DLR +P+ P + ++ DL+ ML DP+
Sbjct: 236 FGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPA 295
Query: 287 TRLTAAEVLAHSWMEECEQVAQKP 310
R+TA E L H +++ +P
Sbjct: 296 KRITAKEALEHPYLQTYHDPNDEP 319
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 143/295 (48%), Gaps = 46/295 (15%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKL-EIEIMTKLSGHPNVV 104
+++G G +GV+ + +K TGEV+A K I D E V S + EI ++ +L+ HPN+V
Sbjct: 13 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELN-HPNIV 69
Query: 105 DLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEA------RVIFRHLMQVVSYCH 158
L V E+ ++L+ E L L+K+ S + L+Q +++CH
Sbjct: 70 KLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 124
Query: 159 GNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHG-TVGSPFYIAPEVLAG 217
+ V+HRDLKP+N+L+ T+ + IKLADFGLA + V + +Y APE+L G
Sbjct: 125 SHRVLHRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 181
Query: 218 --GYNQAADVWSAGVILYILLSGMPPFWGKTK----SKIFDAVRAADLRF---------- 261
Y+ A D+WS G I +++ F G ++ +IF + D
Sbjct: 182 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 241
Query: 262 -PSDP-WDH---------ISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQ 305
PS P W + R L+ ML DP+ R++A LAH + ++ +
Sbjct: 242 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 296
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 143/295 (48%), Gaps = 46/295 (15%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKL-EIEIMTKLSGHPNVV 104
+++G G +GV+ + +K TGEV+A K I D E V S + EI ++ +L+ HPN+V
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELN-HPNIV 68
Query: 105 DLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEA------RVIFRHLMQVVSYCH 158
L V E+ ++L+ E L L+K+ S + L+Q +++CH
Sbjct: 69 KLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 159 GNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAG-QNLHGTVGSPFYIAPEVLAG 217
+ V+HRDLKP+N+L+ T+ + IKLADFGLA + V + +Y APE+L G
Sbjct: 124 SHRVLHRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 180
Query: 218 --GYNQAADVWSAGVILYILLSGMPPFWGKTK----SKIFDAVRAADLRF---------- 261
Y+ A D+WS G I +++ F G ++ +IF + D
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 240
Query: 262 -PSDP-WDH---------ISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQ 305
PS P W + R L+ ML DP+ R++A LAH + ++ +
Sbjct: 241 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 295
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 143/295 (48%), Gaps = 46/295 (15%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKL-EIEIMTKLSGHPNVV 104
+++G G +GV+ + +K TGEV+A K I D E V S + EI ++ +L+ HPN+V
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELN-HPNIV 67
Query: 105 DLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEA------RVIFRHLMQVVSYCH 158
L V E+ ++L+ E L L+K+ S + L+Q +++CH
Sbjct: 68 KLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 159 GNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAG-QNLHGTVGSPFYIAPEVLAG 217
+ V+HRDLKP+N+L+ T+ + IKLADFGLA + V + +Y APE+L G
Sbjct: 123 SHRVLHRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 179
Query: 218 --GYNQAADVWSAGVILYILLSGMPPFWGKTK----SKIFDAVRAADLRF---------- 261
Y+ A D+WS G I +++ F G ++ +IF + D
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 239
Query: 262 -PSDP-WDH---------ISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQ 305
PS P W + R L+ ML DP+ R++A LAH + ++ +
Sbjct: 240 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 294
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 138/293 (47%), Gaps = 40/293 (13%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D Y L + +G G V++ E +A K I ++ T D + EI+ M++
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMD--ELLKEIQAMSQCH- 71
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLE--------KYGRFSETEARVIFRHLM 151
HPN+V + +D + L+M+L +GG + ++ K G E+ I R ++
Sbjct: 72 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 131
Query: 152 QVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGT------VG 205
+ + Y H NG +HRD+K NILL S +++ADFG++ ++ G ++ VG
Sbjct: 132 EGLEYLHKNGQIHRDVKAGNILLGEDGS---VQIADFGVSAFLATGGDITRNKVRKTFVG 188
Query: 206 SPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPS 263
+P ++APEV+ GY+ AD+WS G+ L +G P+ + ++ L +
Sbjct: 189 TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHK------YPPMKVLMLTLQN 242
Query: 264 DP------------WDHISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECE 304
DP S R +I L+ DP R TAAE+L H + ++ +
Sbjct: 243 DPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAK 295
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 130/263 (49%), Gaps = 11/263 (4%)
Query: 41 RYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH 100
+Y +++G G G + D TG+ +A + + + E + + EI +M + + +
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIIN---EILVMRE-NKN 76
Query: 101 PNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGN 160
PN+V+ Y D + ++ME AGG L + + E + + R +Q + + H N
Sbjct: 77 PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC-MDEGQIAAVCRECLQALEFLHSN 135
Query: 161 GVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGT-VGSPFYIAPEVLA-GG 218
V+HRD+K +NILL S +KL DFG I Q+ T VG+P+++APEV+
Sbjct: 136 QVIHRDIKSDNILLGMDGS---VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKA 192
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
Y D+WS G++ ++ G PP+ + + + +P + +SA RD +
Sbjct: 193 YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP-EKLSAIFRDFLN 251
Query: 279 GMLRVDPSTRLTAAEVLAHSWME 301
L +D R +A E+L H +++
Sbjct: 252 RCLDMDVEKRGSAKELLQHQFLK 274
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 126/257 (49%), Gaps = 12/257 (4%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVD 105
+++G G FG + + D T +V+A K I D +++ I+ EI ++++ P V
Sbjct: 33 EKIGKGSFGEVFKGIDNRTQKVVAIKII--DLEEAEDEIEDIQQEITVLSQCDS-PYVTK 89
Query: 106 LKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHR 165
Y ++ + ++ME GG LE G ET+ I R +++ + Y H +HR
Sbjct: 90 YYGSYLKDTKLWIIMEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKKIHR 148
Query: 166 DLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGT-VGSPFYIAPEVLA-GGYNQAA 223
D+K N+LL S +KLADFG+A + Q T VG+PF++APEV+ Y+ A
Sbjct: 149 DIKAANVLL---SEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKA 205
Query: 224 DVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRV 283
D+WS G+ L G PP K+ + + P + S ++ + L
Sbjct: 206 DIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN---PPTLEGNYSKPLKEFVEACLNK 262
Query: 284 DPSTRLTAAEVLAHSWM 300
+PS R TA E+L H ++
Sbjct: 263 EPSFRPTAKELLKHKFI 279
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 138/293 (47%), Gaps = 40/293 (13%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D Y L + +G G V++ E +A K I ++ T D + EI+ M++
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMD--ELLKEIQAMSQCH- 66
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLE--------KYGRFSETEARVIFRHLM 151
HPN+V + +D + L+M+L +GG + ++ K G E+ I R ++
Sbjct: 67 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 126
Query: 152 QVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGT------VG 205
+ + Y H NG +HRD+K NILL S +++ADFG++ ++ G ++ VG
Sbjct: 127 EGLEYLHKNGQIHRDVKAGNILLGEDGS---VQIADFGVSAFLATGGDITRNKVRKTFVG 183
Query: 206 SPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPS 263
+P ++APEV+ GY+ AD+WS G+ L +G P+ + ++ L +
Sbjct: 184 TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHK------YPPMKVLMLTLQN 237
Query: 264 DP------------WDHISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECE 304
DP S R +I L+ DP R TAAE+L H + ++ +
Sbjct: 238 DPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAK 290
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 143/298 (47%), Gaps = 52/298 (17%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKL-EIEIMTKLSGHPNVV 104
+++G G +GV+ + +K TGEV+A K I D E V S + EI ++ +L+ HPN+V
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELN-HPNIV 68
Query: 105 DLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEA---------RVIFRHLMQVVS 155
L V E+ ++L+ E H + +F + A + L+Q ++
Sbjct: 69 KLLDVIHTENKLYLVFE--------HVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 156 YCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAG-QNLHGTVGSPFYIAPEV 214
+CH + V+HRDLKP+N+L+ T+ + IKLADFGLA + V + +Y APE+
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 177
Query: 215 LAG--GYNQAADVWSAGVILYILLSGMPPFWGKTK----SKIFDAVRAADLRF------- 261
L G Y+ A D+WS G I +++ F G ++ +IF + D
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 237
Query: 262 ----PSDP-WDH---------ISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQ 305
PS P W + R L+ ML DP+ R++A LAH + ++ +
Sbjct: 238 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 295
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 140/300 (46%), Gaps = 43/300 (14%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSI---AKDRLVTVEDVRSIKLEIEIM 94
L ++Y +++G G +GV+ + D G ++A K I A+D + +R I L E+
Sbjct: 19 LMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELH 77
Query: 95 TKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVV 154
HPN+V L V E + L+ E E +++ ++ L++ V
Sbjct: 78 -----HPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGV 132
Query: 155 SYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATY--IKAGQNLHGTVGSPFYIAP 212
++CH + ++HRDLKP+N+L+ +S +KLADFGLA I H V + +Y AP
Sbjct: 133 AHCHQHRILHRDLKPQNLLI---NSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAP 188
Query: 213 EVLAGG--YNQAADVWSAGVILYILLSGMPPFWGKTK----SKIFDAVRAADLR------ 260
+VL G Y+ + D+WS G I +++G P F G T KIF + + R
Sbjct: 189 DVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQ 248
Query: 261 ------------FPSDPWDHI----SASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECE 304
F PW I DL+ ML DP+ R++A + + H + ++ +
Sbjct: 249 ELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLD 308
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 138/289 (47%), Gaps = 39/289 (13%)
Query: 42 YVLGKQLGWGQFGVI---RECSDKFTGEVLACKSIAKDRLV---TVEDVRSIKLEIEIMT 95
Y LG LG G FG + +D+ +A K I ++R++ + D + LE+ ++
Sbjct: 33 YRLGPLLGKGGFGTVFAGHRLTDRLQ---VAIKVIPRNRVLGWSPLSDSVTCPLEVALLW 89
Query: 96 KLS---GHPNVVDLKAVYE-EEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLM 151
K+ GHP V+ L +E +E ++ +L +LF + + G E +R F ++
Sbjct: 90 KVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVV 149
Query: 152 QVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTV-----GS 206
+ +CH GVVHRD+K ENIL+ + + KL DFG +G LH G+
Sbjct: 150 AAIQHCHSRGVVHRDIKDENILIDLRRGCA--KLIDFG------SGALLHDEPYTDFDGT 201
Query: 207 PFYIAPEVLAGGYNQA--ADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSD 264
Y PE ++ A A VWS G++LY ++ G PF + +I + A+L FP+
Sbjct: 202 RVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPF--ERDQEILE----AELHFPA- 254
Query: 265 PWDHISASARDLIMGMLRVDPSTRLTAAEVLAHSWME-ECEQVAQKPCK 312
H+S LI L PS+R + E+L WM+ E V P K
Sbjct: 255 ---HVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPAEDVPLNPSK 300
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 140/300 (46%), Gaps = 43/300 (14%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSI---AKDRLVTVEDVRSIKLEIEIM 94
L ++Y +++G G +GV+ + D G ++A K I A+D + +R I L E+
Sbjct: 19 LMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKEL- 76
Query: 95 TKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVV 154
HPN+V L V E + L+ E E +++ ++ L++ V
Sbjct: 77 ----HHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGV 132
Query: 155 SYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATY--IKAGQNLHGTVGSPFYIAP 212
++CH + ++HRDLKP+N+L+ +S +KLADFGLA I H V + +Y AP
Sbjct: 133 AHCHQHRILHRDLKPQNLLI---NSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAP 188
Query: 213 EVLAGG--YNQAADVWSAGVILYILLSGMPPFWGKTK----SKIFDAVRAADLR------ 260
+VL G Y+ + D+WS G I +++G P F G T KIF + + R
Sbjct: 189 DVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQ 248
Query: 261 ------------FPSDPWDHI----SASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECE 304
F PW I DL+ ML DP+ R++A + + H + ++ +
Sbjct: 249 ELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLD 308
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 142/295 (48%), Gaps = 46/295 (15%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKL-EIEIMTKLSGHPNVV 104
+++G G +GV+ + +K TGEV+A K I D E V S + EI ++ +L+ HPN+V
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELN-HPNIV 65
Query: 105 DLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEA------RVIFRHLMQVVSYCH 158
L V E+ ++L+ E L L+ + S + L+Q +++CH
Sbjct: 66 KLLDVIHTENKLYLVFEF-----LHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 159 GNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAG-QNLHGTVGSPFYIAPEVLAG 217
+ V+HRDLKPEN+L+ T+ + IKLADFGLA + V + +Y APE+L G
Sbjct: 121 SHRVLHRDLKPENLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLG 177
Query: 218 --GYNQAADVWSAGVILYILLSGMPPFWGKTK----SKIFDAVRAADLRF---------- 261
Y+ A D+WS G I +++ F G ++ +IF + D
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 262 -PSDP-WDH---------ISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQ 305
PS P W + R L+ ML DP+ R++A LAH + ++ +
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 145/338 (42%), Gaps = 73/338 (21%)
Query: 41 RYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH 100
+Y L K+LG G +G++ + D+ TGEV+A K I D D + EI I+T+LSGH
Sbjct: 10 KYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIF-DAFQNSTDAQRTFREIMILTELSGH 68
Query: 101 PNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGN 160
N+V+L V ++ + + H + + + + L++V+ Y H
Sbjct: 69 ENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSG 128
Query: 161 GVVHRDLKPENILLATKSSSSPIKLADFGLA---TYIKAGQN------------------ 199
G++HRD+KP NILL ++ +K+ADFGL+ I+ N
Sbjct: 129 GLLHRDMKPSNILL---NAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQP 185
Query: 200 -LHGTVGSPFYIAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRA 256
L V + +Y APE+L G Y + D+WS G IL +L G P F G + + +
Sbjct: 186 ILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIG 245
Query: 257 ADLRFPSD----------------------------------PWDHI----------SAS 272
+ FPS+ W ++ +
Sbjct: 246 V-IDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEE 304
Query: 273 ARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKP 310
A DL+ +L+ +P+ R++A + L H ++ ++P
Sbjct: 305 ALDLLDKLLQFNPNKRISANDALKHPFVSIFHNPNEEP 342
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 139/297 (46%), Gaps = 46/297 (15%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
Y K +G G FGV+ + +GE++A K + + + E++IM KL H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK-------NRELQIMRKLD-HC 73
Query: 102 NVVDLKAVY----EEEDYVHLLMELCAGGELFHRLEK-YGRFSET----EARVIFRHLMQ 152
N+V L+ + E++D V+L + L E +R+ + Y R +T ++ L +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 153 VVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAP 212
++Y H G+ HRD+KP+N+LL ++ +KL DFG A + G+ + S +Y AP
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAV--LKLCDFGSAKQLVRGEPNVSYICSRYYRAP 191
Query: 213 EVLAGG--YNQAADVWSAGVILYILLSGMPPFWG----------------KTKSKIFDA- 253
E++ G Y + DVWSAG +L LL G P F G T+ +I +
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 251
Query: 254 VRAADLRFP---SDPWDHI-----SASARDLIMGMLRVDPSTRLTAAEVLAHSWMEE 302
+ FP + PW + A L +L P+ RLT E AHS+ +E
Sbjct: 252 PNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 308
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 126/257 (49%), Gaps = 12/257 (4%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVD 105
+++G G FG + + D T +V+A K I D +++ I+ EI ++++ P V
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKII--DLEEAEDEIEDIQQEITVLSQCDS-PYVTK 69
Query: 106 LKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHR 165
Y ++ + ++ME GG LE G ET+ I R +++ + Y H +HR
Sbjct: 70 YYGSYLKDTKLWIIMEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKKIHR 128
Query: 166 DLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGT-VGSPFYIAPEVLA-GGYNQAA 223
D+K N+LL S +KLADFG+A + Q T VG+PF++APEV+ Y+ A
Sbjct: 129 DIKAANVLL---SEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKA 185
Query: 224 DVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRV 283
D+WS G+ L G PP K+ + + P + S ++ + L
Sbjct: 186 DIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN---PPTLEGNYSKPLKEFVEACLNK 242
Query: 284 DPSTRLTAAEVLAHSWM 300
+PS R TA E+L H ++
Sbjct: 243 EPSFRPTAKELLKHKFI 259
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 140/290 (48%), Gaps = 36/290 (12%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKL-EIEIMTKLSGHPNVV 104
+++G G +GV+ + +K TGEV+A K I D E V S + EI ++ +L+ HPN+V
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELN-HPNIV 67
Query: 105 DLKAVYEEEDYVHLLME-LCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVV 163
L V E+ ++L+ E L + F + L+Q +++CH + V+
Sbjct: 68 KLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 127
Query: 164 HRDLKPENILLATKSSSSPIKLADFGLATYIKAG-QNLHGTVGSPFYIAPEVLAG--GYN 220
HRDLKP+N+L+ T+ + IKLADFGLA + V + +Y APE+L G Y+
Sbjct: 128 HRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 184
Query: 221 QAADVWSAGVILYILLSGMPPFWGKTK----SKIFDAVRAADLRF-----------PSDP 265
A D+WS G I +++ F G ++ +IF + D PS P
Sbjct: 185 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 244
Query: 266 -WDH---------ISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQ 305
W + R L+ ML DP+ R++A LAH + ++ +
Sbjct: 245 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 294
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 140/290 (48%), Gaps = 36/290 (12%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKL-EIEIMTKLSGHPNVV 104
+++G G +GV+ + +K TGEV+A K I D E V S + EI ++ +L+ HPN+V
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELN-HPNIV 68
Query: 105 DLKAVYEEEDYVHLLME-LCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVV 163
L V E+ ++L+ E L + F + L+Q +++CH + V+
Sbjct: 69 KLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 128
Query: 164 HRDLKPENILLATKSSSSPIKLADFGLATYIKAG-QNLHGTVGSPFYIAPEVLAG--GYN 220
HRDLKP+N+L+ T+ + IKLADFGLA + V + +Y APE+L G Y+
Sbjct: 129 HRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 221 QAADVWSAGVILYILLSGMPPFWGKTK----SKIFDAVRAADLRF-----------PSDP 265
A D+WS G I +++ F G ++ +IF + D PS P
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 245
Query: 266 -WDH---------ISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQ 305
W + R L+ ML DP+ R++A LAH + ++ +
Sbjct: 246 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 295
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 140/290 (48%), Gaps = 36/290 (12%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKL-EIEIMTKLSGHPNVV 104
+++G G +GV+ + +K TGEV+A K I D E V S + EI ++ +L+ HPN+V
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELN-HPNIV 68
Query: 105 DLKAVYEEEDYVHLLME-LCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVV 163
L V E+ ++L+ E L + F + L+Q +++CH + V+
Sbjct: 69 KLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 128
Query: 164 HRDLKPENILLATKSSSSPIKLADFGLATYIKAG-QNLHGTVGSPFYIAPEVLAG--GYN 220
HRDLKP+N+L+ T+ + IKLADFGLA + V + +Y APE+L G Y+
Sbjct: 129 HRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 221 QAADVWSAGVILYILLSGMPPFWGKTK----SKIFDAVRAADLRF-----------PSDP 265
A D+WS G I +++ F G ++ +IF + D PS P
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 245
Query: 266 -WDH---------ISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQ 305
W + R L+ ML DP+ R++A LAH + ++ +
Sbjct: 246 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 295
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 142/298 (47%), Gaps = 52/298 (17%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKL-EIEIMTKLSGHPNVV 104
+++G G +GV+ + +K TGEV+A K I D E V S + EI ++ +L+ HPN+V
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELN-HPNIV 64
Query: 105 DLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEA---------RVIFRHLMQVVS 155
L V E+ ++L+ E H + F + A + L+Q ++
Sbjct: 65 KLLDVIHTENKLYLVFE--------HVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 156 YCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHG-TVGSPFYIAPEV 214
+CH + V+HRDLKP+N+L+ T+ + IKLADFGLA + V + +Y APE+
Sbjct: 117 FCHSHRVLHRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 173
Query: 215 LAG--GYNQAADVWSAGVILYILLSGMPPFWGKTK----SKIFDAVRAADLRF------- 261
L G Y+ A D+WS G I +++ F G ++ +IF + D
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM 233
Query: 262 ----PSDP-WDH---------ISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQ 305
PS P W + R L+ ML DP+ R++A LAH + ++ +
Sbjct: 234 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 129/263 (49%), Gaps = 11/263 (4%)
Query: 41 RYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH 100
+Y +++G G G + D TG+ +A + + + E + + EI +M + + +
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIIN---EILVMRE-NKN 76
Query: 101 PNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGN 160
PN+V+ Y D + ++ME AGG L + + E + + R +Q + + H N
Sbjct: 77 PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC-MDEGQIAAVCRECLQALEFLHSN 135
Query: 161 GVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGT-VGSPFYIAPEVLA-GG 218
V+HRD+K +NILL S +KL DFG I Q+ VG+P+++APEV+
Sbjct: 136 QVIHRDIKSDNILLGMDGS---VKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKA 192
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
Y D+WS G++ ++ G PP+ + + + +P + +SA RD +
Sbjct: 193 YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP-EKLSAIFRDFLN 251
Query: 279 GMLRVDPSTRLTAAEVLAHSWME 301
L +D R +A E+L H +++
Sbjct: 252 RCLEMDVEKRGSAKELLQHQFLK 274
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 142/295 (48%), Gaps = 46/295 (15%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKL-EIEIMTKLSGHPNVV 104
+++G G +GV+ + +K TGEV+A I D E V S + EI ++ +L+ HPN+V
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALXKIRLD--TETEGVPSTAIREISLLKELN-HPNIV 65
Query: 105 DLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEA------RVIFRHLMQVVSYCH 158
L V E+ ++L+ E L L+K+ S + L+Q +++CH
Sbjct: 66 KLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 159 GNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHG-TVGSPFYIAPEVLAG 217
+ V+HRDLKP+N+L+ T+ + IKLADFGLA + V + +Y APE+L G
Sbjct: 121 SHRVLHRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 177
Query: 218 --GYNQAADVWSAGVILYILLSGMPPFWGKTK----SKIFDAVRAADLRF---------- 261
Y+ A D+WS G I +++ F G ++ +IF + D
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 237
Query: 262 -PSDP-WDH---------ISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQ 305
PS P W + R L+ ML DP+ R++A LAH + ++ +
Sbjct: 238 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 142/295 (48%), Gaps = 46/295 (15%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKL-EIEIMTKLSGHPNVV 104
+++G G +GV+ + +K TGEV+A I D E V S + EI ++ +L+ HPN+V
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALXKIRLD--TETEGVPSTAIREISLLKELN-HPNIV 64
Query: 105 DLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEA------RVIFRHLMQVVSYCH 158
L V E+ ++L+ E L L+K+ S + L+Q +++CH
Sbjct: 65 KLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 159 GNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHG-TVGSPFYIAPEVLAG 217
+ V+HRDLKP+N+L+ T+ + IKLADFGLA + V + +Y APE+L G
Sbjct: 120 SHRVLHRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 176
Query: 218 --GYNQAADVWSAGVILYILLSGMPPFWGKTK----SKIFDAVRAADLRF---------- 261
Y+ A D+WS G I +++ F G ++ +IF + D
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236
Query: 262 -PSDP-WDH---------ISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQ 305
PS P W + R L+ ML DP+ R++A LAH + ++ +
Sbjct: 237 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 126/257 (49%), Gaps = 12/257 (4%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVD 105
+++G G FG + + D T +V+A K I D +++ I+ EI ++++ P V
Sbjct: 28 EKIGKGSFGEVFKGIDNRTQKVVAIKII--DLEEAEDEIEDIQQEITVLSQCDS-PYVTK 84
Query: 106 LKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHR 165
Y ++ + ++ME GG LE G ET+ I R +++ + Y H +HR
Sbjct: 85 YYGSYLKDTKLWIIMEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKKIHR 143
Query: 166 DLKPENILLATKSSSSPIKLADFGLATYIKAGQ-NLHGTVGSPFYIAPEVLA-GGYNQAA 223
D+K N+LL S +KLADFG+A + Q + VG+PF++APEV+ Y+ A
Sbjct: 144 DIKAANVLL---SEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKA 200
Query: 224 DVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRV 283
D+WS G+ L G PP K+ + + P + S ++ + L
Sbjct: 201 DIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN---PPTLEGNYSKPLKEFVEACLNK 257
Query: 284 DPSTRLTAAEVLAHSWM 300
+PS R TA E+L H ++
Sbjct: 258 EPSFRPTAKELLKHKFI 274
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 129/263 (49%), Gaps = 11/263 (4%)
Query: 41 RYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH 100
+Y +++G G G + D TG+ +A + + + E + + EI +M + + +
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIIN---EILVMRE-NKN 76
Query: 101 PNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGN 160
PN+V+ Y D + ++ME AGG L + + E + + R +Q + + H N
Sbjct: 77 PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC-MDEGQIAAVCRECLQALEFLHSN 135
Query: 161 GVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHG-TVGSPFYIAPEVLA-GG 218
V+HRD+K +NILL S +KL DFG I Q+ VG+P+++APEV+
Sbjct: 136 QVIHRDIKSDNILLGMDGS---VKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKA 192
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
Y D+WS G++ ++ G PP+ + + + +P + +SA RD +
Sbjct: 193 YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP-EKLSAIFRDFLN 251
Query: 279 GMLRVDPSTRLTAAEVLAHSWME 301
L +D R +A E+L H +++
Sbjct: 252 RCLDMDVEKRGSAKELLQHQFLK 274
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 129/263 (49%), Gaps = 11/263 (4%)
Query: 41 RYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH 100
+Y +++G G G + D TG+ +A + + + E + + EI +M + + +
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIIN---EILVMRE-NKN 77
Query: 101 PNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGN 160
PN+V+ Y D + ++ME AGG L + + E + + R +Q + + H N
Sbjct: 78 PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC-MDEGQIAAVCRECLQALEFLHSN 136
Query: 161 GVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGT-VGSPFYIAPEVLA-GG 218
V+HRD+K +NILL S +KL DFG I Q+ VG+P+++APEV+
Sbjct: 137 QVIHRDIKSDNILLGMDGS---VKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKA 193
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
Y D+WS G++ ++ G PP+ + + + +P + +SA RD +
Sbjct: 194 YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP-EKLSAIFRDFLN 252
Query: 279 GMLRVDPSTRLTAAEVLAHSWME 301
L +D R +A E++ H +++
Sbjct: 253 RCLEMDVEKRGSAKELIQHQFLK 275
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 130/263 (49%), Gaps = 11/263 (4%)
Query: 41 RYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH 100
+Y +++G G G + D TG+ +A + + + E + + EI +M + + +
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIIN---EILVMRE-NKN 77
Query: 101 PNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGN 160
PN+V+ Y D + ++ME AGG L + + E + + R +Q + + H N
Sbjct: 78 PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC-MDEGQIAAVCRECLQALEFLHSN 136
Query: 161 GVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGT-VGSPFYIAPEVLA-GG 218
V+HR++K +NILL S +KL DFG I Q+ T VG+P+++APEV+
Sbjct: 137 QVIHRNIKSDNILLGMDGS---VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKA 193
Query: 219 YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
Y D+WS G++ ++ G PP+ + + + +P + +SA RD +
Sbjct: 194 YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP-EKLSAIFRDFLN 252
Query: 279 GMLRVDPSTRLTAAEVLAHSWME 301
L +D R +A E++ H +++
Sbjct: 253 RCLEMDVEKRGSAKELIQHQFLK 275
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 135/268 (50%), Gaps = 21/268 (7%)
Query: 48 LGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDL- 106
+G G +G ++ K G++L K + + E + E+ ++ +L HPN+V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVS-EVNLLRELK-HPNIVRYY 71
Query: 107 -KAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSE-TEARVIFRHLMQV---VSYCH--- 158
+ + ++++ME C GG+L + K + + + + R + Q+ + CH
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131
Query: 159 --GNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGT-VGSPFYIAPEVL 215
G+ V+HRDLKP N+ L K + +KL DFGLA + + T VG+P+Y++PE +
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQN---VKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQM 188
Query: 216 AG-GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASAR 274
YN+ +D+WS G +LY L + MPPF ++ ++ +R +F P+ + S
Sbjct: 189 NRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG--KFRRIPYRY-SDELN 245
Query: 275 DLIMGMLRVDPSTRLTAAEVLAHSWMEE 302
++I ML + R + E+L + + E
Sbjct: 246 EIITRMLNLKDYHRPSVEEILENPLILE 273
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 126/257 (49%), Gaps = 12/257 (4%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVD 105
+++G G FG + + D T +V+A K I D +++ I+ EI ++++ P V
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKII--DLEEAEDEIEDIQQEITVLSQCDS-PYVTK 69
Query: 106 LKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHR 165
Y ++ + ++ME GG LE G ET+ I R +++ + Y H +HR
Sbjct: 70 YYGSYLKDTKLWIIMEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKKIHR 128
Query: 166 DLKPENILLATKSSSSPIKLADFGLATYIKAGQ-NLHGTVGSPFYIAPEVLA-GGYNQAA 223
D+K N+LL S +KLADFG+A + Q + VG+PF++APEV+ Y+ A
Sbjct: 129 DIKAANVLL---SEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKA 185
Query: 224 DVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRV 283
D+WS G+ L G PP K+ + + P + S ++ + L
Sbjct: 186 DIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN---PPTLEGNYSKPLKEFVEACLNK 242
Query: 284 DPSTRLTAAEVLAHSWM 300
+PS R TA E+L H ++
Sbjct: 243 EPSFRPTAKELLKHKFI 259
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 138/297 (46%), Gaps = 46/297 (15%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
Y K +G G FGV+ + +GE++A K + + + E++IM KL H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK-------NRELQIMRKLD-HC 73
Query: 102 NVVDLKAVY----EEEDYVHLLMELCAGGELFHRLEK-YGRFSET----EARVIFRHLMQ 152
N+V L+ + E++D V+L + L +R+ + Y R +T ++ L +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 153 VVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAP 212
++Y H G+ HRD+KP+N+LL ++ +KL DFG A + G+ + S +Y AP
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAV--LKLCDFGSAKQLVRGEPNVSXICSRYYRAP 191
Query: 213 EVLAGG--YNQAADVWSAGVILYILLSGMPPFWG----------------KTKSKIFDA- 253
E++ G Y + DVWSAG +L LL G P F G T+ +I +
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 251
Query: 254 VRAADLRFP---SDPWDHI-----SASARDLIMGMLRVDPSTRLTAAEVLAHSWMEE 302
+ FP + PW + A L +L P+ RLT E AHS+ +E
Sbjct: 252 PNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 308
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 135/268 (50%), Gaps = 21/268 (7%)
Query: 48 LGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDL- 106
+G G +G ++ K G++L K + + E + E+ ++ +L HPN+V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVS-EVNLLRELK-HPNIVRYY 71
Query: 107 -KAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSE-TEARVIFRHLMQV---VSYCH--- 158
+ + ++++ME C GG+L + K + + + + R + Q+ + CH
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131
Query: 159 --GNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGT-VGSPFYIAPEVL 215
G+ V+HRDLKP N+ L K + +KL DFGLA + ++ VG+P+Y++PE +
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQN---VKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQM 188
Query: 216 AG-GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASAR 274
YN+ +D+WS G +LY L + MPPF ++ ++ +R +F P+ + S
Sbjct: 189 NRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG--KFRRIPYRY-SDELN 245
Query: 275 DLIMGMLRVDPSTRLTAAEVLAHSWMEE 302
++I ML + R + E+L + + E
Sbjct: 246 EIITRMLNLKDYHRPSVEEILENPLILE 273
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 133/304 (43%), Gaps = 50/304 (16%)
Query: 48 LGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLK 107
LG G FG + + + A K I T E + +I E+ ++ L+ H VV
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRH----TEEKLSTILSEVMLLASLN-HQYVVRYY 68
Query: 108 AVY-EEEDYVH------------LLMELCAGGELFHRLEKYGRFSET-EARVIFRHLMQV 153
A + E ++V + ME C G L+ + + E +FR +++
Sbjct: 69 AAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEA 128
Query: 154 VSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKA--------GQNLHGT-- 203
+SY H G++HRDLKP NI + S +K+ DFGLA + QNL G+
Sbjct: 129 LSYIHSQGIIHRDLKPMNIFI---DESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 204 -----VGSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRA 256
+G+ Y+A EVL G YN+ D++S G+I + ++ P G + I +R+
Sbjct: 186 NLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI--YPFSTGMERVNILKKLRS 243
Query: 257 ADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKPCKQDDL 316
+ FP D D+ + +I ++ DP+ R A +L W+ P K D
Sbjct: 244 VSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL---------PVKHQDE 294
Query: 317 CCKQ 320
K+
Sbjct: 295 VIKE 298
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 135/274 (49%), Gaps = 28/274 (10%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVR-SIKLEIEI-MTKL 97
DR VLGK G +G++ D +A K I + D R S L EI + K
Sbjct: 26 DRVVLGK----GTYGIVYAGRDLSNQVRIAIKEIPE------RDSRYSQPLHEEIALHKH 75
Query: 98 SGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLE-KYGRFSETEARVIF--RHLMQVV 154
H N+V + E ++ + ME GG L L K+G + E + F + +++ +
Sbjct: 76 LKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGL 135
Query: 155 SYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN--LHGTVGSPFYIAP 212
Y H N +VHRD+K +N+L+ T S +K++DFG + + AG N G+ Y+AP
Sbjct: 136 KYLHDNQIVHRDIKGDNVLINTYSGV--LKISDFGTSKRL-AGINPCTETFTGTLQYMAP 192
Query: 213 EVL---AGGYNQAADVWSAGVILYILLSGMPPFW--GKTKSKIFDAVRAADLRFPSDPWD 267
E++ GY +AAD+WS G + + +G PPF+ G+ ++ +F + + + +
Sbjct: 193 EIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMF---KVGMFKVHPEIPE 249
Query: 268 HISASARDLIMGMLRVDPSTRLTAAEVLAHSWME 301
+SA A+ I+ DP R A ++L +++
Sbjct: 250 SMSAEAKAFILKCFEPDPDKRACANDLLVDEFLK 283
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 141/300 (47%), Gaps = 64/300 (21%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSI---AKDRLVTVEDVRSIKLEIEIMTKLSGHPN 102
+++G G +GV+ + + + GE A K I +D + +R EI I+ +L H N
Sbjct: 8 EKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIR----EISILKELK-HSN 61
Query: 103 VVDLKAVYEEED-----YVHL------LMELCAGGELFHRLEKYGRFSETEARVIFRHLM 151
+V L V + + HL L+++C GG A+ L+
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG-----------LESVTAKSFLLQLL 110
Query: 152 QVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATY--IKAGQNLHGTVGSPFY 209
++YCH V+HRDLKP+N+L+ + +K+ADFGLA I + H V + +Y
Sbjct: 111 NGIAYCHDRRVLHRDLKPQNLLI---NREGELKIADFGLARAFGIPVRKYTHEVV-TLWY 166
Query: 210 IAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGKTKS----KIFDAVRAADLR--- 260
AP+VL G Y+ D+WS G I +++G P F G +++ +IF + + +
Sbjct: 167 RAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWP 226
Query: 261 --------------FPSDPWDH----ISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEE 302
+ PW+ + S DL+ ML++DP+ R+TA + L H++ +E
Sbjct: 227 NVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 134/268 (50%), Gaps = 21/268 (7%)
Query: 48 LGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDL- 106
+G G +G ++ K G++L K + + E + E+ ++ +L HPN+V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVS-EVNLLRELK-HPNIVRYY 71
Query: 107 -KAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSE-TEARVIFRHLMQV---VSYCH--- 158
+ + ++++ME C GG+L + K + + + + R + Q+ + CH
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131
Query: 159 --GNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNL-HGTVGSPFYIAPEVL 215
G+ V+HRDLKP N+ L K + +KL DFGLA + + VG+P+Y++PE +
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQN---VKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQM 188
Query: 216 AG-GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASAR 274
YN+ +D+WS G +LY L + MPPF ++ ++ +R +F P+ + S
Sbjct: 189 NRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG--KFRRIPYRY-SDELN 245
Query: 275 DLIMGMLRVDPSTRLTAAEVLAHSWMEE 302
++I ML + R + E+L + + E
Sbjct: 246 EIITRMLNLKDYHRPSVEEILENPLILE 273
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 141/300 (47%), Gaps = 64/300 (21%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSI---AKDRLVTVEDVRSIKLEIEIMTKLSGHPN 102
+++G G +GV+ + + + GE A K I +D + +R EI I+ +L H N
Sbjct: 8 EKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIR----EISILKELK-HSN 61
Query: 103 VVDLKAVYEEED-----YVHL------LMELCAGGELFHRLEKYGRFSETEARVIFRHLM 151
+V L V + + HL L+++C GG A+ L+
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG-----------LESVTAKSFLLQLL 110
Query: 152 QVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATY--IKAGQNLHGTVGSPFY 209
++YCH V+HRDLKP+N+L+ + +K+ADFGLA I + H V + +Y
Sbjct: 111 NGIAYCHDRRVLHRDLKPQNLLI---NREGELKIADFGLARAFGIPVRKYTHEIV-TLWY 166
Query: 210 IAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGKTKS----KIFDAVRAADLR--- 260
AP+VL G Y+ D+WS G I +++G P F G +++ +IF + + +
Sbjct: 167 RAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWP 226
Query: 261 --------------FPSDPWDH----ISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEE 302
+ PW+ + S DL+ ML++DP+ R+TA + L H++ +E
Sbjct: 227 NVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 141/300 (47%), Gaps = 64/300 (21%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSI---AKDRLVTVEDVRSIKLEIEIMTKLSGHPN 102
+++G G +GV+ + + + GE A K I +D + +R EI I+ +L H N
Sbjct: 8 EKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIR----EISILKELK-HSN 61
Query: 103 VVDLKAVYEEED-----YVHL------LMELCAGGELFHRLEKYGRFSETEARVIFRHLM 151
+V L V + + HL L+++C GG A+ L+
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG-----------LESVTAKSFLLQLL 110
Query: 152 QVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATY--IKAGQNLHGTVGSPFY 209
++YCH V+HRDLKP+N+L+ + +K+ADFGLA I + H V + +Y
Sbjct: 111 NGIAYCHDRRVLHRDLKPQNLLI---NREGELKIADFGLARAFGIPVRKYTHEVV-TLWY 166
Query: 210 IAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGKTKS----KIFDAVRAADLR--- 260
AP+VL G Y+ D+WS G I +++G P F G +++ +IF + + +
Sbjct: 167 RAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWP 226
Query: 261 --------------FPSDPWDH----ISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEE 302
+ PW+ + S DL+ ML++DP+ R+TA + L H++ +E
Sbjct: 227 NVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 135/274 (49%), Gaps = 28/274 (10%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVR-SIKLEIEI-MTKL 97
DR VLGK G +G++ D +A K I + D R S L EI + K
Sbjct: 12 DRVVLGK----GTYGIVYAGRDLSNQVRIAIKEIPE------RDSRYSQPLHEEIALHKH 61
Query: 98 SGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLE-KYGRFSETEARVIF--RHLMQVV 154
H N+V + E ++ + ME GG L L K+G + E + F + +++ +
Sbjct: 62 LKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGL 121
Query: 155 SYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN--LHGTVGSPFYIAP 212
Y H N +VHRD+K +N+L+ T S +K++DFG + + AG N G+ Y+AP
Sbjct: 122 KYLHDNQIVHRDIKGDNVLINTYSGV--LKISDFGTSKRL-AGINPCTETFTGTLQYMAP 178
Query: 213 EVL---AGGYNQAADVWSAGVILYILLSGMPPFW--GKTKSKIFDAVRAADLRFPSDPWD 267
E++ GY +AAD+WS G + + +G PPF+ G+ ++ +F + + + +
Sbjct: 179 EIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMF---KVGMFKVHPEIPE 235
Query: 268 HISASARDLIMGMLRVDPSTRLTAAEVLAHSWME 301
+SA A+ I+ DP R A ++L +++
Sbjct: 236 SMSAEAKAFILKCFEPDPDKRACANDLLVDEFLK 269
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 132/276 (47%), Gaps = 35/276 (12%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVD 105
++LG G +G + + K TG+++A K + + D++ I EI IM + P+VV
Sbjct: 35 EKLGEGSYGSVYKAIHKETGQIVAIKQVPVE-----SDLQEIIKEISIMQQCDS-PHVVK 88
Query: 106 LKAVYEEEDYVHLLMELCAGGELFHRLEKYGR-FSETEARVIFRHLMQVVSYCHGNGVVH 164
Y + + ++ME C G + + + +E E I + ++ + Y H +H
Sbjct: 89 YYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIH 148
Query: 165 RDLKPENILLATKSSSSPIKLADFGLA---TYIKAGQNLHGTVGSPFYIAPEVLAG-GYN 220
RD+K NILL T+ + KLADFG+A T A +N +G+PF++APEV+ GYN
Sbjct: 149 RDIKAGNILLNTEGHA---KLADFGVAGQLTDXMAKRNX--VIGTPFWMAPEVIQEIGYN 203
Query: 221 QAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDP---------WDHISA 271
AD+WS G+ + G PP+ +RA P++P W S
Sbjct: 204 CVADIWSLGITAIEMAEGKPPYAD------IHPMRAI-FMIPTNPPPTFRKPELW---SD 253
Query: 272 SARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVA 307
+ D + L P R TA ++L H ++ + V+
Sbjct: 254 NFTDFVKQCLVKSPEQRATATQLLQHPFVRSAKGVS 289
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 145/297 (48%), Gaps = 14/297 (4%)
Query: 9 SSQLSTQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVL 68
S Q Q + + + ++D + D ++ ++G G G++ + + +G+++
Sbjct: 1 SPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFI---KIGEGSTGIVCIATVRSSGKLV 57
Query: 69 ACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGEL 128
A K + + + R + ++ + H NVV++ Y D + ++ME GG L
Sbjct: 58 AVKKMDLRK----QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 113
Query: 129 FHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADF 188
+ + R +E + + ++Q +S H GV+HRD+K ++ILL + +KL+DF
Sbjct: 114 TD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILL---THDGRVKLSDF 169
Query: 189 GLATYI-KAGQNLHGTVGSPFYIAPEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGKT 246
G + K VG+P+++APE+++ Y D+WS G+++ ++ G PP++ +
Sbjct: 170 GFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP 229
Query: 247 KSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEEC 303
K +R +L +S S + + +L DP+ R TAAE+L H ++ +
Sbjct: 230 PLKAMKMIR-DNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA 285
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 144/297 (48%), Gaps = 14/297 (4%)
Query: 9 SSQLSTQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVL 68
S Q Q + + + ++D + D ++ ++G G G++ + + +G+++
Sbjct: 123 SPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFI---KIGEGSTGIVCIATVRSSGKLV 179
Query: 69 ACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGEL 128
A K + + + R + ++ + H NVV++ Y D + ++ME GG L
Sbjct: 180 AVKKMD----LRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 235
Query: 129 FHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADF 188
+ + R +E + + ++Q +S H GV+HRD+K ++ILL +KL+DF
Sbjct: 236 TD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR---VKLSDF 291
Query: 189 GLATYI-KAGQNLHGTVGSPFYIAPEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGKT 246
G + K VG+P+++APE+++ Y D+WS G+++ ++ G PP++ +
Sbjct: 292 GFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP 351
Query: 247 KSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEEC 303
K +R +L +S S + + +L DP+ R TAAE+L H ++ +
Sbjct: 352 PLKAMKMIR-DNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA 407
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 145/297 (48%), Gaps = 14/297 (4%)
Query: 9 SSQLSTQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVL 68
S Q Q + + + ++D + D ++ ++G G G++ + + +G+++
Sbjct: 3 SPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFI---KIGEGSTGIVCIATVRSSGKLV 59
Query: 69 ACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGEL 128
A K + + + R + ++ + H NVV++ Y D + ++ME GG L
Sbjct: 60 AVKKMDLRK----QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 115
Query: 129 FHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADF 188
+ + R +E + + ++Q +S H GV+HRD+K ++ILL + +KL+DF
Sbjct: 116 TD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILL---THDGRVKLSDF 171
Query: 189 GLATYI-KAGQNLHGTVGSPFYIAPEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGKT 246
G + K VG+P+++APE+++ Y D+WS G+++ ++ G PP++ +
Sbjct: 172 GFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP 231
Query: 247 KSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEEC 303
K +R +L +S S + + +L DP+ R TAAE+L H ++ +
Sbjct: 232 PLKAMKMIR-DNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA 287
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 144/297 (48%), Gaps = 14/297 (4%)
Query: 9 SSQLSTQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVL 68
S Q Q + + + ++D + D ++ ++G G G++ + + +G+++
Sbjct: 46 SPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFI---KIGEGSTGIVCIATVRSSGKLV 102
Query: 69 ACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGEL 128
A K + + + R + ++ + H NVV++ Y D + ++ME GG L
Sbjct: 103 AVKKMD----LRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 158
Query: 129 FHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADF 188
+ + R +E + + ++Q +S H GV+HRD+K ++ILL +KL+DF
Sbjct: 159 TD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR---VKLSDF 214
Query: 189 GLATYI-KAGQNLHGTVGSPFYIAPEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGKT 246
G + K VG+P+++APE+++ Y D+WS G+++ ++ G PP++ +
Sbjct: 215 GFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP 274
Query: 247 KSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEEC 303
K +R +L +S S + + +L DP+ R TAAE+L H ++ +
Sbjct: 275 PLKAMKMIR-DNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA 330
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 127/259 (49%), Gaps = 17/259 (6%)
Query: 51 GQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVY 110
G FG + + +K T + A K I + E++ +EI+I+ HPN+V L +
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILAS-CDHPNIVKLLDAF 76
Query: 111 EEEDYVHLLMELCAGGELFHRLEKYGR-FSETEARVIFRHLMQVVSYCHGNGVVHRDLKP 169
E+ + +L+E CAGG + + + R +E++ +V+ + + ++Y H N ++HRDLK
Sbjct: 77 YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKA 136
Query: 170 ENILLATKSSSSPIKLADFGLATYIKAG--QNLHGTVGSPFYIAPEVLA------GGYNQ 221
NIL IKLADFG++ Q +G+P+++APEV+ Y+
Sbjct: 137 GNILFTLDGD---IKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDY 193
Query: 222 AADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGML 281
ADVWS G+ L + PP ++ + ++ + P S++ +D + L
Sbjct: 194 KADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQP-SRWSSNFKDFLKKCL 252
Query: 282 RVDPSTRLTAAEVLAHSWM 300
+ R T +++L H ++
Sbjct: 253 EKNVDARWTTSQLLQHPFV 271
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 103/211 (48%), Gaps = 13/211 (6%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ + ++LG G FG + + TGE +A K ++ ++ ++ LEI+IM KL+ HP
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE--LSPKNRERWCLEIQIMKKLN-HP 72
Query: 102 NVVDLKAVYE------EEDYVHLLMELCAGGELFHRLEKYGR---FSETEARVIFRHLMQ 152
NVV + V + D L ME C GG+L L ++ E R + +
Sbjct: 73 NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS 132
Query: 153 VVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAP 212
+ Y H N ++HRDLKPENI+L K+ D G A + G+ VG+ Y+AP
Sbjct: 133 ALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAP 192
Query: 213 EVL-AGGYNQAADVWSAGVILYILLSGMPPF 242
E+L Y D WS G + + ++G PF
Sbjct: 193 ELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 132/259 (50%), Gaps = 11/259 (4%)
Query: 47 QLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDL 106
++G G G++ + + +G+++A K + + + R + ++ + H NVV++
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRK----QQRRELLFNEVVIMRDYQHENVVEM 82
Query: 107 KAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHRD 166
Y D + ++ME GG L + + R +E + + ++Q +S H GV+HRD
Sbjct: 83 YNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 141
Query: 167 LKPENILLATKSSSSPIKLADFGLATYI-KAGQNLHGTVGSPFYIAPEVLAG-GYNQAAD 224
+K ++ILL + +KL+DFG + K VG+P+++APE+++ Y D
Sbjct: 142 IKSDSILL---THDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 198
Query: 225 VWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVD 284
+WS G+++ ++ G PP++ + K +R +L +S S + + +L D
Sbjct: 199 IWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR-DNLPPRLKNLHKVSPSLKGFLDRLLVRD 257
Query: 285 PSTRLTAAEVLAHSWMEEC 303
P+ R TAAE+L H ++ +
Sbjct: 258 PAQRATAAELLKHPFLAKA 276
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 103/211 (48%), Gaps = 13/211 (6%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ + ++LG G FG + + TGE +A K ++ ++ ++ LEI+IM KL+ HP
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE--LSPKNRERWCLEIQIMKKLN-HP 73
Query: 102 NVVDLKAVYE------EEDYVHLLMELCAGGELFHRLEKYGR---FSETEARVIFRHLMQ 152
NVV + V + D L ME C GG+L L ++ E R + +
Sbjct: 74 NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS 133
Query: 153 VVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAP 212
+ Y H N ++HRDLKPENI+L K+ D G A + G+ VG+ Y+AP
Sbjct: 134 ALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAP 193
Query: 213 EVL-AGGYNQAADVWSAGVILYILLSGMPPF 242
E+L Y D WS G + + ++G PF
Sbjct: 194 ELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 132/259 (50%), Gaps = 11/259 (4%)
Query: 47 QLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDL 106
++G G G++ + + +G+++A K + + + R + ++ + H NVV++
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRK----QQRRELLFNEVVIMRDYQHENVVEM 86
Query: 107 KAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHRD 166
Y D + ++ME GG L + + R +E + + ++Q +S H GV+HRD
Sbjct: 87 YNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 145
Query: 167 LKPENILLATKSSSSPIKLADFGLATYI-KAGQNLHGTVGSPFYIAPEVLAG-GYNQAAD 224
+K ++ILL + +KL+DFG + K VG+P+++APE+++ Y D
Sbjct: 146 IKSDSILL---THDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 202
Query: 225 VWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVD 284
+WS G+++ ++ G PP++ + K +R +L +S S + + +L D
Sbjct: 203 IWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR-DNLPPRLKNLHKVSPSLKGFLDRLLVRD 261
Query: 285 PSTRLTAAEVLAHSWMEEC 303
P+ R TAAE+L H ++ +
Sbjct: 262 PAQRATAAELLKHPFLAKA 280
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 146/295 (49%), Gaps = 26/295 (8%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D ++ + LG G FG + C K TG++ ACK + K RL + + +E +I+ K+
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRL----EKYGRFSETEARVIFRHLMQVVS 155
+V L +E + + L+M + GG++ + + E F E A ++ +
Sbjct: 245 R-FIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLE 303
Query: 156 YCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQ-NLHGTVGSPFYIAPEV 214
+ H +++RDLKPEN+LL + ++++D GLA +KAGQ G G+P ++APE+
Sbjct: 304 HLHQRNIIYRDLKPENVLLDDDGN---VRISDLGLAVELKAGQTKTKGYAGTPGFMAPEL 360
Query: 215 LAG-GYNQAADVWSAGVILYILLSGMPPFWGKTK----SKIFDAVRAADLRFPSDPWDHI 269
L G Y+ + D ++ GV LY +++ PF + + ++ V + +P D
Sbjct: 361 LLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP----DKF 416
Query: 270 SASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKPCKQDDLCCKQLEVG 324
S +++D +L+ DP RL + C+ + P + D+ +QLE G
Sbjct: 417 SPASKDFCEALLQKDPEKRLGFRD-------GSCDGLRTHPLFR-DISWRQLEAG 463
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 126/260 (48%), Gaps = 18/260 (6%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKL 97
+++RY + +LG G + D +A K+I E ++ + E+ ++L
Sbjct: 9 INERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQL 68
Query: 98 SGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYC 157
S H N+V + V EE+D +L+ME G L +E +G S A ++ + +
Sbjct: 69 S-HQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHA 127
Query: 158 HGNGVVHRDLKPENILLATKSSSSPIKLADFGLA-----TYIKAGQNLHGTVGSPFYIAP 212
H +VHRD+KP+NIL+ S+ +K+ DFG+A T + ++ GTV Y +P
Sbjct: 128 HDMRIVHRDIKPQNILI---DSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQ---YFSP 181
Query: 213 EVLAG-GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFP---SDPWDH 268
E G ++ D++S G++LY +L G PPF G+T I A++ P +D
Sbjct: 182 EQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSI--AIKHIQDSVPNVTTDVRKD 239
Query: 269 ISASARDLIMGMLRVDPSTR 288
I S ++I+ D + R
Sbjct: 240 IPQSLSNVILRATEKDKANR 259
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 146/295 (49%), Gaps = 26/295 (8%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D ++ + LG G FG + C K TG++ ACK + K RL + + +E +I+ K+
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRL----EKYGRFSETEARVIFRHLMQVVS 155
+V L +E + + L+M + GG++ + + E F E A ++ +
Sbjct: 245 R-FIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLE 303
Query: 156 YCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQ-NLHGTVGSPFYIAPEV 214
+ H +++RDLKPEN+LL + ++++D GLA +KAGQ G G+P ++APE+
Sbjct: 304 HLHQRNIIYRDLKPENVLLDDDGN---VRISDLGLAVELKAGQTKTKGYAGTPGFMAPEL 360
Query: 215 LAG-GYNQAADVWSAGVILYILLSGMPPFWGKTK----SKIFDAVRAADLRFPSDPWDHI 269
L G Y+ + D ++ GV LY +++ PF + + ++ V + +P D
Sbjct: 361 LLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP----DKF 416
Query: 270 SASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKPCKQDDLCCKQLEVG 324
S +++D +L+ DP RL + C+ + P + D+ +QLE G
Sbjct: 417 SPASKDFCEALLQKDPEKRLGFRD-------GSCDGLRTHPLFR-DISWRQLEAG 463
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 132/304 (43%), Gaps = 50/304 (16%)
Query: 48 LGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLK 107
LG G FG + + + A K I T E + +I E+ ++ L+ H VV
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRH----TEEKLSTILSEVMLLASLN-HQYVVRYY 68
Query: 108 AVY-EEEDYVH------------LLMELCAGGELFHRLEKYGRFSET-EARVIFRHLMQV 153
A + E ++V + ME C L+ + + E +FR +++
Sbjct: 69 AAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEA 128
Query: 154 VSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKA--------GQNLHGT-- 203
+SY H G++HRDLKP NI + S +K+ DFGLA + QNL G+
Sbjct: 129 LSYIHSQGIIHRDLKPMNIFI---DESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 204 -----VGSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRA 256
+G+ Y+A EVL G YN+ D++S G+I + ++ P G + I +R+
Sbjct: 186 NLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI--YPFSTGMERVNILKKLRS 243
Query: 257 ADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKPCKQDDL 316
+ FP D D+ + +I ++ DP+ R A +L W+ P K D
Sbjct: 244 VSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL---------PVKHQDE 294
Query: 317 CCKQ 320
K+
Sbjct: 295 VIKE 298
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 146/295 (49%), Gaps = 26/295 (8%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D ++ + LG G FG + C K TG++ ACK + K RL + + +E +I+ K+
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRL----EKYGRFSETEARVIFRHLMQVVS 155
+V L +E + + L+M + GG++ + + E F E A ++ +
Sbjct: 245 R-FIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLE 303
Query: 156 YCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQ-NLHGTVGSPFYIAPEV 214
+ H +++RDLKPEN+LL + ++++D GLA +KAGQ G G+P ++APE+
Sbjct: 304 HLHQRNIIYRDLKPENVLLDDDGN---VRISDLGLAVELKAGQTKTKGYAGTPGFMAPEL 360
Query: 215 LAG-GYNQAADVWSAGVILYILLSGMPPFWGKTK----SKIFDAVRAADLRFPSDPWDHI 269
L G Y+ + D ++ GV LY +++ PF + + ++ V + +P D
Sbjct: 361 LLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP----DKF 416
Query: 270 SASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKPCKQDDLCCKQLEVG 324
S +++D +L+ DP RL + C+ + P + D+ +QLE G
Sbjct: 417 SPASKDFCEALLQKDPEKRLGFRD-------GSCDGLRTHPLFR-DISWRQLEAG 463
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 146/295 (49%), Gaps = 26/295 (8%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D ++ + LG G FG + C K TG++ ACK + K RL + + +E +I+ K+
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRL----EKYGRFSETEARVIFRHLMQVVS 155
+V L +E + + L+M + GG++ + + E F E A ++ +
Sbjct: 245 R-FIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLE 303
Query: 156 YCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN-LHGTVGSPFYIAPEV 214
+ H +++RDLKPEN+LL + ++++D GLA +KAGQ G G+P ++APE+
Sbjct: 304 HLHQRNIIYRDLKPENVLLDDDGN---VRISDLGLAVELKAGQTKTKGYAGTPGFMAPEL 360
Query: 215 LAG-GYNQAADVWSAGVILYILLSGMPPFWGKTK----SKIFDAVRAADLRFPSDPWDHI 269
L G Y+ + D ++ GV LY +++ PF + + ++ V + +P D
Sbjct: 361 LLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP----DKF 416
Query: 270 SASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKPCKQDDLCCKQLEVG 324
S +++D +L+ DP RL + C+ + P + D+ +QLE G
Sbjct: 417 SPASKDFCEALLQKDPEKRLGFRD-------GSCDGLRTHPLFR-DISWRQLEAG 463
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 123/284 (43%), Gaps = 41/284 (14%)
Query: 41 RYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH 100
R + + L G F + E D +G A K + + E R+I E+ M KLSGH
Sbjct: 29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE---EEKNRAIIQEVCFMKKLSGH 85
Query: 101 PNVVDLKAV----YEEEDYVH----LLMELCAGG--ELFHRLEKYGRFSETEARVIFRHL 150
PN+V + EE D LL ELC G E ++E G S IF
Sbjct: 86 PNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQT 145
Query: 151 MQVVSYCHGNG--VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTV---- 204
+ V + H ++HRDLK EN+LL+ + + IKL DFG AT I + +
Sbjct: 146 CRAVQHMHRQKPPIIHRDLKVENLLLSNQGT---IKLCDFGSATTISHYPDYSWSAQRRA 202
Query: 205 ---------GSPFYIAPEVLAGGYN----QAADVWSAGVILYILLSGMPPFWGKTKSKIF 251
+P Y PE++ N + D+W+ G ILY+L PF K +I
Sbjct: 203 LVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIV 262
Query: 252 DAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVL 295
+ ++ P D LI ML+V+P RL+ AEV+
Sbjct: 263 NG------KYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVV 300
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 132/275 (48%), Gaps = 16/275 (5%)
Query: 33 TQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIE 92
T S+LSDRY LG+ LG+G + D +A K + D + E +
Sbjct: 5 TTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQ 64
Query: 93 IMTKLSGHPNVVDLKAVYEEEDYV----HLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
L+ HP +V + A E E +++ME G L + G + A +
Sbjct: 65 NAAALN-HPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIA 123
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN----LHGTV 204
Q +++ H NG++HRD+KP NI++ S+++ +K+ DFG+A I N +
Sbjct: 124 DACQALNFSHQNGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 205 GSPFYIAPEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGKTKSKI-FDAVRAADLRFP 262
G+ Y++PE G + +DV+S G +LY +L+G PPF G + + + VR D P
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR-EDPIPP 239
Query: 263 SDPWDHISASARDLIMGMLRVDPSTRL-TAAEVLA 296
S + +SA +++ L +P R TAAE+ A
Sbjct: 240 SARHEGLSADLDAVVLKALAKNPENRYQTAAEMRA 274
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 129/270 (47%), Gaps = 12/270 (4%)
Query: 33 TQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIE 92
I++ + + +++G G FG + + D T +V+A K I D +++ I+ EI
Sbjct: 16 NNIADPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKII--DLEEAEDEIEDIQQEIT 73
Query: 93 IMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQ 152
++++ V Y + + ++ME GG L + G F E + + + +++
Sbjct: 74 VLSQCDSS-YVTKYYGSYLKGSKLWIIMEYLGGGSALDLL-RAGPFDEFQIATMLKEILK 131
Query: 153 VVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGT-VGSPFYIA 211
+ Y H +HRD+K N+LL S +KLADFG+A + Q T VG+PF++A
Sbjct: 132 GLDYLHSEKKIHRDIKAANVLL---SEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMA 188
Query: 212 PEVL-AGGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHIS 270
PEV+ Y+ AD+WS G+ L G PP ++ + + P +
Sbjct: 189 PEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNN---PPTLVGDFT 245
Query: 271 ASARDLIMGMLRVDPSTRLTAAEVLAHSWM 300
S ++ I L DPS R TA E+L H ++
Sbjct: 246 KSFKEFIDACLNKDPSFRPTAKELLKHKFI 275
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 119/262 (45%), Gaps = 19/262 (7%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVD 105
+++G G FG + D EV+A K ++ + E + I E+ + KL HPN +
Sbjct: 21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR-HPNTIQ 79
Query: 106 LKAVYEEEDYVHLLMELCAGG--ELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVV 163
+ Y E L+ME C G +L +K E E + +Q ++Y H + ++
Sbjct: 80 YRGCYLREHTAWLVMEYCLGSASDLLEVHKK--PLQEVEIAAVTHGALQGLAYLHSHNMI 137
Query: 164 HRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVL----AGGY 219
HRD+K NILL S +KL DFG A+ + VG+P+++APEV+ G Y
Sbjct: 138 HRDVKAGNILL---SEPGLVKLGDFGSASIMAPANXF---VGTPYWMAPEVILAMDEGQY 191
Query: 220 NQAADVWSAGVILYILLSGMPPFWG-KTKSKIFDAVRAADLRFPSDPWDHISASARDLIM 278
+ DVWS G+ L PP + S ++ + S W S R+ +
Sbjct: 192 DGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHW---SEYFRNFVD 248
Query: 279 GMLRVDPSTRLTAAEVLAHSWM 300
L+ P R T+ +L H ++
Sbjct: 249 SCLQKIPQDRPTSEVLLKHRFV 270
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 118/261 (45%), Gaps = 17/261 (6%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVD 105
+++G G FG + D EV+A K ++ + E + I E+ + KL HPN +
Sbjct: 60 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR-HPNTIQ 118
Query: 106 LKAVYEEEDYVHLLMELCAGG--ELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVV 163
+ Y E L+ME C G +L +K E E + +Q ++Y H + ++
Sbjct: 119 YRGCYLREHTAWLVMEYCLGSASDLLEVHKK--PLQEVEIAAVTHGALQGLAYLHSHNMI 176
Query: 164 HRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVL----AGGY 219
HRD+K NILL S +KL DFG A+ + VG+P+++APEV+ G Y
Sbjct: 177 HRDVKAGNILL---SEPGLVKLGDFGSASIMAPANXF---VGTPYWMAPEVILAMDEGQY 230
Query: 220 NQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMG 279
+ DVWS G+ L PP + + A P+ H S R+ +
Sbjct: 231 DGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI--AQNESPALQSGHWSEYFRNFVDS 288
Query: 280 MLRVDPSTRLTAAEVLAHSWM 300
L+ P R T+ +L H ++
Sbjct: 289 CLQKIPQDRPTSEVLLKHRFV 309
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 135/275 (49%), Gaps = 16/275 (5%)
Query: 33 TQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIE 92
T S+LSDRY LG+ LG+G + D +A K + D + E +
Sbjct: 5 TTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQ 64
Query: 93 IMTKLSGHPNVVDLKAVYEEEDYV----HLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
L+ HP +V + E E +++ME G L + G + A +
Sbjct: 65 NAAALN-HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIA 123
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYI-KAGQNLHGT---V 204
Q +++ H NG++HRD+KP NIL+ S+++ +K+ DFG+A I +G ++ T +
Sbjct: 124 DACQALNFSHQNGIIHRDVKPANILI---SATNAVKVVDFGIARAIADSGNSVXQTAAVI 180
Query: 205 GSPFYIAPEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGKTKSKI-FDAVRAADLRFP 262
G+ Y++PE G + +DV+S G +LY +L+G PPF G + + + VR D P
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR-EDPIPP 239
Query: 263 SDPWDHISASARDLIMGMLRVDPSTRL-TAAEVLA 296
S + +SA +++ L +P R TAAE+ A
Sbjct: 240 SARHEGLSADLDAVVLKALAKNPENRYQTAAEMRA 274
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 131/275 (47%), Gaps = 16/275 (5%)
Query: 33 TQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIE 92
T S+LSDRY LG+ LG+G + D +A K + D + E +
Sbjct: 5 TTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQ 64
Query: 93 IMTKLSGHPNVVDLKAVYEEEDYV----HLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
L+ HP +V + E E +++ME G L + G + A +
Sbjct: 65 NAAALN-HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIA 123
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN----LHGTV 204
Q +++ H NG++HRD+KP NI++ S+++ +K+ DFG+A I N +
Sbjct: 124 DACQALNFSHQNGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 205 GSPFYIAPEVLAGGYNQA-ADVWSAGVILYILLSGMPPFWGKTKSKI-FDAVRAADLRFP 262
G+ Y++PE G A +DV+S G +LY +L+G PPF G + + + VR D P
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVR-EDPIPP 239
Query: 263 SDPWDHISASARDLIMGMLRVDPSTRL-TAAEVLA 296
S + +SA +++ L +P R TAAE+ A
Sbjct: 240 SARHEGLSADLDAVVLKALAKNPENRYQTAAEMRA 274
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 137/306 (44%), Gaps = 52/306 (16%)
Query: 39 SDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKL--EIEIMTK 96
+ RY ++G G +G + + D +G +A KS+ R+ E+ I E+ ++ +
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSV---RVPNGEEGLPISTVREVALLRR 59
Query: 97 LSG--HPNVVDLKAV-----YEEEDYVHLLMELCAGGELFHRLEKY---GRFSETEARVI 146
L HPNVV L V + E V L+ E +L L+K G +ET + +
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFE-HVDQDLRTYLDKAPPPGLPAET-IKDL 117
Query: 147 FRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGS 206
R ++ + + H N +VHRDLKPENIL+ +S +KLADFGLA L V +
Sbjct: 118 MRQFLRGLDFLHANCIVHRDLKPENILV---TSGGTVKLADFGLARIYSYQMALFPVVVT 174
Query: 207 PFYIAPEV-LAGGYNQAADVWSAGVILYILLSGMPPFWGKTKS----KIFDAVRAADLRF 261
+Y APEV L Y D+WS G I + P F G +++ KIFD +
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLP---- 230
Query: 262 PSDPWDH-----------------------ISASARDLIMGMLRVDPSTRLTAAEVLAHS 298
P D W + S L++ ML +P R++A L HS
Sbjct: 231 PEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHS 290
Query: 299 WMEECE 304
++ + E
Sbjct: 291 YLHKDE 296
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 137/306 (44%), Gaps = 52/306 (16%)
Query: 39 SDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKL--EIEIMTK 96
+ RY ++G G +G + + D +G +A KS+ R+ E+ I E+ ++ +
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSV---RVPNGEEGLPISTVREVALLRR 59
Query: 97 LSG--HPNVVDLKAV-----YEEEDYVHLLMELCAGGELFHRLEKY---GRFSETEARVI 146
L HPNVV L V + E V L+ E +L L+K G +ET + +
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFE-HVDQDLRTYLDKAPPPGLPAET-IKDL 117
Query: 147 FRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGS 206
R ++ + + H N +VHRDLKPENIL+ +S +KLADFGLA L V +
Sbjct: 118 MRQFLRGLDFLHANCIVHRDLKPENILV---TSGGTVKLADFGLARIYSYQMALDPVVVT 174
Query: 207 PFYIAPEV-LAGGYNQAADVWSAGVILYILLSGMPPFWGKTKS----KIFDAVRAADLRF 261
+Y APEV L Y D+WS G I + P F G +++ KIFD +
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLP---- 230
Query: 262 PSDPWDH-----------------------ISASARDLIMGMLRVDPSTRLTAAEVLAHS 298
P D W + S L++ ML +P R++A L HS
Sbjct: 231 PEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHS 290
Query: 299 WMEECE 304
++ + E
Sbjct: 291 YLHKDE 296
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 137/301 (45%), Gaps = 56/301 (18%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKL-EIEIMTKLSGHPNVV 104
++LG G + + + +K TG +A K + D + E S + EI +M +L H N+V
Sbjct: 11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLD---SEEGTPSTAIREISLMKELK-HENIV 66
Query: 105 DLKAVYEEEDYVHLLMELCAGGELFHRLEKY---------GRFSETEARVIFR-HLMQVV 154
L V E+ + L+ E L+KY R E F+ L+Q +
Sbjct: 67 RLYDVIHTENKLTLVFEFMDND-----LKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGL 121
Query: 155 SYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGT-VGSPFYIAPE 213
++CH N ++HRDLKP+N+L+ + +KL DFGLA N + V + +Y AP+
Sbjct: 122 AFCHENKILHRDLKPQNLLINKRGQ---LKLGDFGLARAFGIPVNTFSSEVVTLWYRAPD 178
Query: 214 VLAGG--YNQAADVWSAGVILYILLSGMPPFWGKTKSK----IFDAVRAA---------- 257
VL G Y+ + D+WS G IL +++G P F G + IFD +
Sbjct: 179 VLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTK 238
Query: 258 --------------DLRFPSDPW--DHISASARDLIMGMLRVDPSTRLTAAEVLAHSWME 301
DLR P + + + D + G+L+++P RL+A + L H W
Sbjct: 239 LPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFA 298
Query: 302 E 302
E
Sbjct: 299 E 299
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 137/306 (44%), Gaps = 52/306 (16%)
Query: 39 SDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKL--EIEIMTK 96
+ RY ++G G +G + + D +G +A KS+ R+ E+ I E+ ++ +
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSV---RVPNGEEGLPISTVREVALLRR 59
Query: 97 LSG--HPNVVDLKAV-----YEEEDYVHLLMELCAGGELFHRLEKY---GRFSETEARVI 146
L HPNVV L V + E V L+ E +L L+K G +ET + +
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFE-HVDQDLRTYLDKAPPPGLPAET-IKDL 117
Query: 147 FRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGS 206
R ++ + + H N +VHRDLKPENIL+ +S +KLADFGLA L V +
Sbjct: 118 MRQFLRGLDFLHANCIVHRDLKPENILV---TSGGTVKLADFGLARIYSYQMALAPVVVT 174
Query: 207 PFYIAPEV-LAGGYNQAADVWSAGVILYILLSGMPPFWGKTKS----KIFDAVRAADLRF 261
+Y APEV L Y D+WS G I + P F G +++ KIFD +
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLP---- 230
Query: 262 PSDPWDH-----------------------ISASARDLIMGMLRVDPSTRLTAAEVLAHS 298
P D W + S L++ ML +P R++A L HS
Sbjct: 231 PEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHS 290
Query: 299 WMEECE 304
++ + E
Sbjct: 291 YLHKDE 296
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 120/256 (46%), Gaps = 12/256 (4%)
Query: 47 QLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDL 106
++G G FG + + D T EV+A K I D +++ I+ EI ++++ P +
Sbjct: 26 RIGKGSFGEVYKGIDNHTKEVVAIKII--DLEEAEDEIEDIQQEITVLSQCDS-PYITRY 82
Query: 107 KAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHRD 166
Y + + ++ME GG L K G ET I R +++ + Y H +HRD
Sbjct: 83 FGSYLKSTKLWIIMEYLGGGSALDLL-KPGPLEETYIATILREILKGLDYLHSERKIHRD 141
Query: 167 LKPENILLATKSSSSPIKLADFGLATYIKAGQ-NLHGTVGSPFYIAPEVLA-GGYNQAAD 224
+K N+LL S +KLADFG+A + Q + VG+PF++APEV+ Y+ AD
Sbjct: 142 IKAANVLL---SEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKAD 198
Query: 225 VWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVD 284
+WS G+ L G PP ++ + P S ++ + L D
Sbjct: 199 IWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNS---PPTLEGQHSKPFKEFVEACLNKD 255
Query: 285 PSTRLTAAEVLAHSWM 300
P R TA E+L H ++
Sbjct: 256 PRFRPTAKELLKHKFI 271
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 131/275 (47%), Gaps = 16/275 (5%)
Query: 33 TQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIE 92
T S+LSDRY LG+ LG+G + D +A K + D + E +
Sbjct: 5 TTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQ 64
Query: 93 IMTKLSGHPNVVDLKAVYEEEDYV----HLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
L+ HP +V + E E +++ME G L + G + A +
Sbjct: 65 NAAALN-HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIA 123
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN----LHGTV 204
Q +++ H NG++HRD+KP NI++ S+++ +K+ DFG+A I N +
Sbjct: 124 DACQALNFSHQNGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 205 GSPFYIAPEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGKTKSKI-FDAVRAADLRFP 262
G+ Y++PE G + +DV+S G +LY +L+G PPF G + + + VR D P
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR-EDPIPP 239
Query: 263 SDPWDHISASARDLIMGMLRVDPSTRL-TAAEVLA 296
S + +SA +++ L +P R TAAE+ A
Sbjct: 240 SARHEGLSADLDAVVLKALAKNPENRYQTAAEMRA 274
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 131/275 (47%), Gaps = 16/275 (5%)
Query: 33 TQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIE 92
T S+LSDRY LG+ LG+G + D +A K + D + E +
Sbjct: 5 TTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQ 64
Query: 93 IMTKLSGHPNVVDLKAVYEEEDYV----HLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
L+ HP +V + E E +++ME G L + G + A +
Sbjct: 65 NAAALN-HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIA 123
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN----LHGTV 204
Q +++ H NG++HRD+KP NI++ S+++ +K+ DFG+A I N +
Sbjct: 124 DACQALNFSHQNGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 205 GSPFYIAPEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGKTKSKI-FDAVRAADLRFP 262
G+ Y++PE G + +DV+S G +LY +L+G PPF G + + + VR D P
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR-EDPIPP 239
Query: 263 SDPWDHISASARDLIMGMLRVDPSTRL-TAAEVLA 296
S + +SA +++ L +P R TAAE+ A
Sbjct: 240 SARHEGLSADLDAVVLKALAKNPENRYQTAAEMRA 274
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 134/309 (43%), Gaps = 49/309 (15%)
Query: 36 SNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKL--EIEI 93
S + RY ++G G +G + + D +G +A KS+ I E+ +
Sbjct: 5 SMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVAL 64
Query: 94 MTKLSG--HPNVVDLKAV-----YEEEDYVHLLMELCAGGELFHRLEKY---GRFSETEA 143
+ +L HPNVV L V + E V L+ E +L L+K G +ET
Sbjct: 65 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFE-HVDQDLRTYLDKAPPPGLPAET-I 122
Query: 144 RVIFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGT 203
+ + R ++ + + H N +VHRDLKPENIL+ +S +KLADFGLA L
Sbjct: 123 KDLMRQFLRGLDFLHANCIVHRDLKPENILV---TSGGTVKLADFGLARIYSYQMALTPV 179
Query: 204 VGSPFYIAPEV-LAGGYNQAADVWSAGVILYILLSGMPPFWGKTKS----KIFDAVRAAD 258
V + +Y APEV L Y D+WS G I + P F G +++ KIFD +
Sbjct: 180 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLP- 238
Query: 259 LRFPSDPWDH-----------------------ISASARDLIMGMLRVDPSTRLTAAEVL 295
P D W + S L++ ML +P R++A L
Sbjct: 239 ---PEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRAL 295
Query: 296 AHSWMEECE 304
HS++ + E
Sbjct: 296 QHSYLHKDE 304
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 139/311 (44%), Gaps = 44/311 (14%)
Query: 37 NLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTK 96
L YV +G G +G + DK +GE +A K +++ + R+ + E+ ++ K
Sbjct: 21 ELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYR-EL-LLLK 78
Query: 97 LSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHR-LEKYG--RFSETEARVIFRHLMQV 153
H NV+ L V+ + + L+K +FSE + + + +++
Sbjct: 79 HMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKG 138
Query: 154 VSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE 213
+ Y H GVVHRDLKP N+ + + +K+ DFGLA + A + G V + +Y APE
Sbjct: 139 LKYIHSAGVVHRDLKPGNLAV---NEDCELKILDFGLARH--ADAEMTGYVVTRWYRAPE 193
Query: 214 VLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTK-------------------SKIFD 252
V+ YNQ D+WS G I+ +L+G F GK K+ D
Sbjct: 194 VILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLND 253
Query: 253 -AVRAADLRFPSDP-------WDHISASARDLIMGMLRVDPSTRLTAAEVLAHSWME--- 301
A ++ P P + S A DL+ ML +D RLTAA+ L H + E
Sbjct: 254 KAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFR 313
Query: 302 --ECEQVAQKP 310
E E AQ+P
Sbjct: 314 DPEEETEAQQP 324
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 131/275 (47%), Gaps = 16/275 (5%)
Query: 33 TQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIE 92
T S+LSDRY LG+ LG+G + D +A K + D + E +
Sbjct: 22 TTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQ 81
Query: 93 IMTKLSGHPNVVDLKAVYEEEDYV----HLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
L+ HP +V + E E +++ME G L + G + A +
Sbjct: 82 NAAALN-HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIA 140
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN----LHGTV 204
Q +++ H NG++HRD+KP NI++ S+++ +K+ DFG+A I N +
Sbjct: 141 DACQALNFSHQNGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADSGNSVTQTAAVI 197
Query: 205 GSPFYIAPEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGKTKSKI-FDAVRAADLRFP 262
G+ Y++PE G + +DV+S G +LY +L+G PPF G + + + VR D P
Sbjct: 198 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR-EDPIPP 256
Query: 263 SDPWDHISASARDLIMGMLRVDPSTRL-TAAEVLA 296
S + +SA +++ L +P R TAAE+ A
Sbjct: 257 SARHEGLSADLDAVVLKALAKNPENRYQTAAEMRA 291
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 122/263 (46%), Gaps = 19/263 (7%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
D + + K +G G F + K TG+V A K + K ++ +V + E +++
Sbjct: 61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVN-GD 119
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYG-RFSETEARVIFRHLMQVVSYCH 158
+ L +++E+Y++L+ME GG+L L K+G R AR ++ + H
Sbjct: 120 RRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH 179
Query: 159 GNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHG--TVGSPFYIAPEVLA 216
G VHRD+KP+NILL I+LADFG ++A + VG+P Y++PE+L
Sbjct: 180 RLGYVHRDIKPDNILL---DRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQ 236
Query: 217 G--------GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAV--RAADLRFPSDPW 266
Y D W+ GV Y + G PF+ + ++ + + L P
Sbjct: 237 AVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVD- 295
Query: 267 DHISASARDLIMGMLRVDPSTRL 289
+ + ARD I +L P TRL
Sbjct: 296 EGVPEEARDFIQRLL-CPPETRL 317
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 119/247 (48%), Gaps = 16/247 (6%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVD 105
K +G G FG + K T + A K + K ++ + + E +++ +
Sbjct: 80 KVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVN-GDCQWITA 138
Query: 106 LKAVYEEEDYVHLLMELCAGGELFHRLEKY-GRFSETEARVIFRHLMQVVSYCHGNGVVH 164
L +++E++++L+M+ GG+L L K+ + E AR ++ + H VH
Sbjct: 139 LHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVH 198
Query: 165 RDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTV--GSPFYIAPEVLA------ 216
RD+KP+N+LL I+LADFG + + +V G+P YI+PE+L
Sbjct: 199 RDIKPDNVLLDVNGH---IRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGM 255
Query: 217 GGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLR--FPSDPWDHISASAR 274
G Y D WS GV +Y +L G PF+ ++ + + + + R FPS D +S A+
Sbjct: 256 GKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTD-VSEEAK 314
Query: 275 DLIMGML 281
DLI ++
Sbjct: 315 DLIQRLI 321
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 119/247 (48%), Gaps = 16/247 (6%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVD 105
K +G G FG + K T + A K + K ++ + + E +++ +
Sbjct: 96 KVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVN-GDCQWITA 154
Query: 106 LKAVYEEEDYVHLLMELCAGGELFHRLEKY-GRFSETEARVIFRHLMQVVSYCHGNGVVH 164
L +++E++++L+M+ GG+L L K+ + E AR ++ + H VH
Sbjct: 155 LHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVH 214
Query: 165 RDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTV--GSPFYIAPEVLA------ 216
RD+KP+N+LL I+LADFG + + +V G+P YI+PE+L
Sbjct: 215 RDIKPDNVLLDVNGH---IRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGM 271
Query: 217 GGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLR--FPSDPWDHISASAR 274
G Y D WS GV +Y +L G PF+ ++ + + + + R FPS D +S A+
Sbjct: 272 GKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTD-VSEEAK 330
Query: 275 DLIMGML 281
DLI ++
Sbjct: 331 DLIQRLI 337
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 130/305 (42%), Gaps = 52/305 (17%)
Query: 48 LGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLK 107
LG G FG + + + A K I T E + +I E+ ++ L+ H VV
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRH----TEEKLSTILSEVXLLASLN-HQYVVRYY 68
Query: 108 AVY-EEEDYVH------------LLMELCAGGELFHRLEKYGRFSET-EARVIFRHLMQV 153
A + E ++V + E C L+ + + E +FR +++
Sbjct: 69 AAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEA 128
Query: 154 VSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKA--------GQNLHGT-- 203
+SY H G++HR+LKP NI + S +K+ DFGLA + QNL G+
Sbjct: 129 LSYIHSQGIIHRNLKPXNIFI---DESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 204 -----VGSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPF-WGKTKSKIFDAVR 255
+G+ Y+A EVL G YN+ D +S G+I + + PF G + I +R
Sbjct: 186 NLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFF---EXIYPFSTGXERVNILKKLR 242
Query: 256 AADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKPCKQDD 315
+ + FP D D+ + +I ++ DP+ R A +L W+ P K D
Sbjct: 243 SVSIEFPPDFDDNKXKVEKKIIRLLIDHDPNKRPGARTLLNSGWL---------PVKHQD 293
Query: 316 LCCKQ 320
K+
Sbjct: 294 EVIKE 298
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 138/311 (44%), Gaps = 44/311 (14%)
Query: 37 NLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTK 96
L YV +G G +G + DK +GE +A K +++ + R+ + E+ ++ K
Sbjct: 39 ELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYR-EL-LLLK 96
Query: 97 LSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHR-LEKYG--RFSETEARVIFRHLMQV 153
H NV+ L V+ + + L+K FSE + + + +++
Sbjct: 97 HMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKG 156
Query: 154 VSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE 213
+ Y H GVVHRDLKP N+ + + +K+ DFGLA + A + G V + +Y APE
Sbjct: 157 LKYIHSAGVVHRDLKPGNLAV---NEDCELKILDFGLARH--ADAEMTGYVVTRWYRAPE 211
Query: 214 VLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTK-------------------SKIFD 252
V+ YNQ D+WS G I+ +L+G F GK K+ D
Sbjct: 212 VILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLND 271
Query: 253 -AVRAADLRFPSDP-------WDHISASARDLIMGMLRVDPSTRLTAAEVLAHSWME--- 301
A ++ P P + S A DL+ ML +D RLTAA+ L H + E
Sbjct: 272 KAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFR 331
Query: 302 --ECEQVAQKP 310
E E AQ+P
Sbjct: 332 DPEEETEAQQP 342
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 141/314 (44%), Gaps = 65/314 (20%)
Query: 32 ATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVED--VRSIKL 89
A + + + RY LG GQF + + DK T +++A K I +D R+
Sbjct: 2 ALDVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALR 61
Query: 90 EIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR- 148
EI+++ +LS HPN++ L + + + L+ + F ET+ VI +
Sbjct: 62 EIKLLQELS-HPNIIGLLDAFGHKSNISLVFD----------------FMETDLEVIIKD 104
Query: 149 --------HL-------MQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLA-T 192
H+ +Q + Y H + ++HRDLKP N+LL + +KLADFGLA +
Sbjct: 105 NSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLL---DENGVLKLADFGLAKS 161
Query: 193 YIKAGQNLHGTVGSPFYIAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGKTK--- 247
+ + V + +Y APE+L G Y D+W+ G IL LL +P G +
Sbjct: 162 FGSPNRAYXHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQ 221
Query: 248 -SKIFDAV------RAADL----------RFPSDPWDHISASA----RDLIMGMLRVDPS 286
++IF+ + + D+ FP P HI ++A DLI G+ +P
Sbjct: 222 LTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPC 281
Query: 287 TRLTAAEVLAHSWM 300
R+TA + L +
Sbjct: 282 ARITATQALKMKYF 295
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 118/247 (47%), Gaps = 16/247 (6%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVD 105
K +G G FG + K +V A K + K ++ + + E +++ +
Sbjct: 80 KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVN-GDSKWITT 138
Query: 106 LKAVYEEEDYVHLLMELCAGGELFHRLEKY-GRFSETEARVIFRHLMQVVSYCHGNGVVH 164
L +++++ ++L+M+ GG+L L K+ R E AR ++ + H VH
Sbjct: 139 LHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVH 198
Query: 165 RDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGT--VGSPFYIAPEVL------A 216
RD+KP+NIL+ I+LADFG + + + VG+P YI+PE+L
Sbjct: 199 RDIKPDNILMDMNGH---IRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGK 255
Query: 217 GGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAV--RAADLRFPSDPWDHISASAR 274
G Y D WS GV +Y +L G PF+ ++ + + + +FP+ D +S +A+
Sbjct: 256 GRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTD-VSENAK 314
Query: 275 DLIMGML 281
DLI ++
Sbjct: 315 DLIRRLI 321
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 142/324 (43%), Gaps = 51/324 (15%)
Query: 34 QISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEI 93
Q+ ++ RY +G G +G++ D +A K I+ T R+++ EI+I
Sbjct: 21 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQ-RTLR-EIKI 78
Query: 94 MTKLSGHPNVVDLKAVY-----EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ + H N++ + + E+ V+++ +L ++L K S
Sbjct: 79 LLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLY 135
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHG----TV 204
+++ + Y H V+HRDLKP N+LL T + +K+ DFGLA + G V
Sbjct: 136 QILRGLKYIHSANVLHRDLKPSNLLLNT---TXDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 205 GSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAV-------- 254
+ +Y APE++ + GY ++ D+WS G IL +LS P F GK + +
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 252
Query: 255 ------------RAADLRFPSD---PWDHI----SASARDLIMGMLRVDPSTRLTAAEVL 295
R L P PW+ + + A DL+ ML +P R+ + L
Sbjct: 253 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 312
Query: 296 AHSWMEEC-----EQVAQKPCKQD 314
AH ++E+ E +A+ P K D
Sbjct: 313 AHPYLEQYYDPSDEPIAEAPFKFD 336
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 144/324 (44%), Gaps = 51/324 (15%)
Query: 34 QISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEI 93
Q+ ++ RY +G G +G++ D +A K I+ T R+++ EI+I
Sbjct: 37 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ-RTLR-EIKI 94
Query: 94 MTKLSGHPNVVDLKAVY-----EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ + H N++ + + E+ V+L+ L G +L+ +L K S
Sbjct: 95 LLRFR-HENIIGINDIIRAPTIEQMKDVYLVTHL-MGADLY-KLLKTQHLSNDHICYFLY 151
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHG----TV 204
+++ + Y H V+HRDLKP N+LL T + +K+ DFGLA + G V
Sbjct: 152 QILRGLKYIHSANVLHRDLKPSNLLLNT---TXDLKICDFGLARVADPDHDHTGFLTEYV 208
Query: 205 GSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAV-------- 254
+ +Y APE++ + GY ++ D+WS G IL +LS P F GK + +
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 268
Query: 255 ------------RAADLRFPSD---PWDHI----SASARDLIMGMLRVDPSTRLTAAEVL 295
R L P PW+ + + A DL+ ML +P R+ + L
Sbjct: 269 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 328
Query: 296 AHSWMEEC-----EQVAQKPCKQD 314
AH ++E+ E +A+ P K D
Sbjct: 329 AHPYLEQYYDPSDEPIAEAPFKFD 352
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 139/325 (42%), Gaps = 61/325 (18%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLS- 98
DR+ + + G G FG ++ +K TG +A K + ++D R E++IM L+
Sbjct: 23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKV-------IQDPRFRNRELQIMQDLAV 75
Query: 99 -GHPNVVDLKAVY-------EEEDYVHLLMELCAGGELFHR-LEKYGRFSETEARVIFR- 148
HPN+V L++ + + Y++++ME + HR Y R ++ +
Sbjct: 76 LHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVP--DTLHRCCRNYYRRQVAPPPILIKV 133
Query: 149 ---HLMQVVSYCH--GNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGT 203
L++ + H V HRD+KP N+L+ + +KL DFG A + +
Sbjct: 134 FLFQLIRSIGCLHLPSVNVCHRDIKPHNVLV--NEADGTLKLCDFGSAKKLSPSEPNVAY 191
Query: 204 VGSPFYIAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGKTKS-KIFDAVRAADLR 260
+ S +Y APE++ G Y A D+WS G I ++ G P F G + ++ + VR L
Sbjct: 192 ICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRV--LG 249
Query: 261 FPSD---------------------PWDHI--------SASARDLIMGMLRVDPSTRLTA 291
PS PW ++ + A DL+ +L+ P R+
Sbjct: 250 CPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKP 309
Query: 292 AEVLAHSWMEECEQVAQKPCKQDDL 316
E L H + +E A K DL
Sbjct: 310 YEALCHPYFDELHDPATKLPNNKDL 334
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 146/338 (43%), Gaps = 66/338 (19%)
Query: 39 SDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDR---------LVTVEDVRSIKL 89
S +Y LGK LG G FG++ E D +G+ A K + +D + ++ V IKL
Sbjct: 6 SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVNIIKL 65
Query: 90 EIEIMT----------------KLSGHPNVVD--LKAVY---EEEDYVHLLMELCAGGEL 128
T KL G N V+ K+V + Y++++ME +
Sbjct: 66 VDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP--DT 123
Query: 129 FHRLEKY----GRFSETEARVIFRH-LMQVVSYCHGNGVVHRDLKPENILLATKSSSSPI 183
H++ K GR I+ + L + V + H G+ HRD+KP+N+L+ +K ++ +
Sbjct: 124 LHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNT--L 181
Query: 184 KLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAGG--YNQAADVWSAGVILYILLSGMPP 241
KL DFG A + + + S FY APE++ G Y + D+WS G + L+ G P
Sbjct: 182 KLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPL 241
Query: 242 FWGKT-----------------KSKIFDAVRAADLRFPS---DPWDHI-----SASARDL 276
F G+T + I ++RFP+ W I + A DL
Sbjct: 242 FSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDL 301
Query: 277 IMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKPCKQD 314
+ +LR +P R+ E +AH + + + K +
Sbjct: 302 LEQILRYEPDLRINPYEAMAHPFFDHLRNSYESEVKNN 339
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 142/324 (43%), Gaps = 51/324 (15%)
Query: 34 QISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEI 93
Q+ ++ RY +G G +G++ D +A K I+ T R+++ EI+I
Sbjct: 21 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ-RTLR-EIKI 78
Query: 94 MTKLSGHPNVVDLKAVY-----EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ + H N++ + + E+ V+++ +L ++L K S
Sbjct: 79 LLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLY 135
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHG----TV 204
+++ + Y H V+HRDLKP N+LL T + +K+ DFGLA + G V
Sbjct: 136 QILRGLKYIHSANVLHRDLKPSNLLLNT---TXDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 205 GSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAV-------- 254
+ +Y APE++ + GY ++ D+WS G IL +LS P F GK + +
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 252
Query: 255 ------------RAADLRFPSD---PWDHI----SASARDLIMGMLRVDPSTRLTAAEVL 295
R L P PW+ + + A DL+ ML +P R+ + L
Sbjct: 253 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 312
Query: 296 AHSWMEEC-----EQVAQKPCKQD 314
AH ++E+ E +A+ P K D
Sbjct: 313 AHPYLEQYYDPSDEPIAEAPFKFD 336
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 142/324 (43%), Gaps = 51/324 (15%)
Query: 34 QISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEI 93
Q+ ++ RY +G G +G++ D +A K I+ T R+++ EI+I
Sbjct: 21 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ-RTLR-EIKI 78
Query: 94 MTKLSGHPNVVDLKAVY-----EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ + H N++ + + E+ V+++ +L ++L K S
Sbjct: 79 LLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLY 135
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHG----TV 204
+++ + Y H V+HRDLKP N+LL T + +K+ DFGLA + G V
Sbjct: 136 QILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLARVADPDHDHTGFLXEXV 192
Query: 205 GSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAV-------- 254
+ +Y APE++ + GY ++ D+WS G IL +LS P F GK + +
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 252
Query: 255 ------------RAADLRFPSD---PWDHI----SASARDLIMGMLRVDPSTRLTAAEVL 295
R L P PW+ + + A DL+ ML +P R+ + L
Sbjct: 253 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 312
Query: 296 AHSWMEEC-----EQVAQKPCKQD 314
AH ++E+ E +A+ P K D
Sbjct: 313 AHPYLEQYYDPSDEPIAEAPFKFD 336
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 142/324 (43%), Gaps = 51/324 (15%)
Query: 34 QISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEI 93
Q+ ++ RY +G G +G++ D +A K I+ T R+++ EI+I
Sbjct: 22 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ-RTLR-EIKI 79
Query: 94 MTKLSGHPNVVDLKAVY-----EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ + H N++ + + E+ V+++ +L ++L K S
Sbjct: 80 LLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLY 136
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHG----TV 204
+++ + Y H V+HRDLKP N+LL T + +K+ DFGLA + G V
Sbjct: 137 QILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLARVADPDHDHTGFLXEXV 193
Query: 205 GSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAV-------- 254
+ +Y APE++ + GY ++ D+WS G IL +LS P F GK + +
Sbjct: 194 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 253
Query: 255 ------------RAADLRFPSD---PWDHI----SASARDLIMGMLRVDPSTRLTAAEVL 295
R L P PW+ + + A DL+ ML +P R+ + L
Sbjct: 254 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 313
Query: 296 AHSWMEEC-----EQVAQKPCKQD 314
AH ++E+ E +A+ P K D
Sbjct: 314 AHPYLEQYYDPSDEPIAEAPFKFD 337
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 112/252 (44%), Gaps = 13/252 (5%)
Query: 47 QLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDL 106
+LG G +G + + K G + A K + R + E+ K+ HP V L
Sbjct: 64 RLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLA-EVGSHEKVGQHPCCVRL 122
Query: 107 KAVYEEEDYVHLLMELCAGGELFHRLEKYG-RFSETEARVIFRHLMQVVSYCHGNGVVHR 165
+ +EE ++L ELC G L E +G E + R + +++ H G+VH
Sbjct: 123 EQAWEEGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHL 181
Query: 166 DLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAGGYNQAADV 225
D+KP NI L + KL DFGL + G P Y+APE+L G Y AADV
Sbjct: 182 DVKPANIFLGPRGR---CKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQGSYGTAADV 238
Query: 226 WSAGVILYILLSGMP-PFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVD 284
+S G+ + + M P G+ ++ P + +S+ R +++ ML D
Sbjct: 239 FSLGLTILEVACNMELPHGGEGWQQLRQGY------LPPEFTAGLSSELRSVLVMMLEPD 292
Query: 285 PSTRLTAAEVLA 296
P R TA +LA
Sbjct: 293 PKLRATAEALLA 304
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 142/324 (43%), Gaps = 51/324 (15%)
Query: 34 QISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEI 93
Q+ ++ RY +G G +G++ D +A K I+ T R+++ EI+I
Sbjct: 15 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ-RTLR-EIKI 72
Query: 94 MTKLSGHPNVVDLKAVY-----EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ + H N++ + + E+ V+++ +L ++L K S
Sbjct: 73 LLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLY 129
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHG----TV 204
+++ + Y H V+HRDLKP N+LL T + +K+ DFGLA + G V
Sbjct: 130 QILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLARVADPDHDHTGFLTEYV 186
Query: 205 GSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAV-------- 254
+ +Y APE++ + GY ++ D+WS G IL +LS P F GK + +
Sbjct: 187 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 246
Query: 255 ------------RAADLRFPSD---PWDHI----SASARDLIMGMLRVDPSTRLTAAEVL 295
R L P PW+ + + A DL+ ML +P R+ + L
Sbjct: 247 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 306
Query: 296 AHSWMEEC-----EQVAQKPCKQD 314
AH ++E+ E +A+ P K D
Sbjct: 307 AHPYLEQYYDPSDEPIAEAPFKFD 330
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 142/324 (43%), Gaps = 51/324 (15%)
Query: 34 QISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEI 93
Q+ ++ RY +G G +G++ D +A K I+ T R+++ EI+I
Sbjct: 22 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ-RTLR-EIKI 79
Query: 94 MTKLSGHPNVVDLKAVY-----EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ + H N++ + + E+ V+++ +L ++L K S
Sbjct: 80 LLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLY 136
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHG----TV 204
+++ + Y H V+HRDLKP N+LL T + +K+ DFGLA + G V
Sbjct: 137 QILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLARVADPDHDHTGFLTEYV 193
Query: 205 GSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAV-------- 254
+ +Y APE++ + GY ++ D+WS G IL +LS P F GK + +
Sbjct: 194 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 253
Query: 255 ------------RAADLRFPSD---PWDHI----SASARDLIMGMLRVDPSTRLTAAEVL 295
R L P PW+ + + A DL+ ML +P R+ + L
Sbjct: 254 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 313
Query: 296 AHSWMEEC-----EQVAQKPCKQD 314
AH ++E+ E +A+ P K D
Sbjct: 314 AHPYLEQYYDPSDEPIAEAPFKFD 337
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 142/324 (43%), Gaps = 51/324 (15%)
Query: 34 QISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEI 93
Q+ ++ RY +G G +G++ D +A K I+ T R+++ EI+I
Sbjct: 23 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ-RTLR-EIKI 80
Query: 94 MTKLSGHPNVVDLKAVY-----EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ + H N++ + + E+ V+++ +L ++L K S
Sbjct: 81 LLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLY 137
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHG----TV 204
+++ + Y H V+HRDLKP N+LL T + +K+ DFGLA + G V
Sbjct: 138 QILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLARVADPDHDHTGFLTEYV 194
Query: 205 GSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAV-------- 254
+ +Y APE++ + GY ++ D+WS G IL +LS P F GK + +
Sbjct: 195 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 254
Query: 255 ------------RAADLRFPSD---PWDHI----SASARDLIMGMLRVDPSTRLTAAEVL 295
R L P PW+ + + A DL+ ML +P R+ + L
Sbjct: 255 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 314
Query: 296 AHSWMEEC-----EQVAQKPCKQD 314
AH ++E+ E +A+ P K D
Sbjct: 315 AHPYLEQYYDPSDEPIAEAPFKFD 338
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 142/324 (43%), Gaps = 51/324 (15%)
Query: 34 QISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEI 93
Q+ ++ RY +G G +G++ D +A K I+ T R+++ EI+I
Sbjct: 14 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ-RTLR-EIKI 71
Query: 94 MTKLSGHPNVVDLKAVY-----EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ + H N++ + + E+ V+++ +L ++L K S
Sbjct: 72 LLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLY 128
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHG----TV 204
+++ + Y H V+HRDLKP N+LL T + +K+ DFGLA + G V
Sbjct: 129 QILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLARVADPDHDHTGFLTEYV 185
Query: 205 GSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAV-------- 254
+ +Y APE++ + GY ++ D+WS G IL +LS P F GK + +
Sbjct: 186 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 245
Query: 255 ------------RAADLRFPSD---PWDHI----SASARDLIMGMLRVDPSTRLTAAEVL 295
R L P PW+ + + A DL+ ML +P R+ + L
Sbjct: 246 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 305
Query: 296 AHSWMEEC-----EQVAQKPCKQD 314
AH ++E+ E +A+ P K D
Sbjct: 306 AHPYLEQYYDPSDEPIAEAPFKFD 329
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 142/324 (43%), Gaps = 51/324 (15%)
Query: 34 QISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEI 93
Q+ ++ RY +G G +G++ D +A K I+ T R+++ EI+I
Sbjct: 21 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ-RTLR-EIKI 78
Query: 94 MTKLSGHPNVVDLKAVY-----EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ + H N++ + + E+ V+++ +L ++L K S
Sbjct: 79 LLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLY 135
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHG----TV 204
+++ + Y H V+HRDLKP N+LL T + +K+ DFGLA + G V
Sbjct: 136 QILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 205 GSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAV-------- 254
+ +Y APE++ + GY ++ D+WS G IL +LS P F GK + +
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 252
Query: 255 ------------RAADLRFPSD---PWDHI----SASARDLIMGMLRVDPSTRLTAAEVL 295
R L P PW+ + + A DL+ ML +P R+ + L
Sbjct: 253 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 312
Query: 296 AHSWMEEC-----EQVAQKPCKQD 314
AH ++E+ E +A+ P K D
Sbjct: 313 AHPYLEQYYDPSDEPIAEAPFKFD 336
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 149/352 (42%), Gaps = 71/352 (20%)
Query: 10 SQLSTQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLA 69
S + +QF S +V+ T T+L RY K +G G G++ D G +A
Sbjct: 2 SHMDSQFY-SVQVADSTFTVLK---------RYQQLKPIGSGAQGIVCAAFDTVLGINVA 51
Query: 70 CKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVY------EEEDYVHLLMELC 123
K +++ R+ + E+ ++ K H N++ L V+ EE V+L+MEL
Sbjct: 52 VKKLSRPFQNQTHAKRAYR-EL-VLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 109
Query: 124 AGG--ELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSS 181
++ H + R S + ++ + + H G++HRDLKP NI++ S
Sbjct: 110 DANLCQVIHMELDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDC 161
Query: 182 PIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAG-GYNQAADVWSAGVILYILLSGMP 240
+K+ DFGLA + V + +Y APEV+ G GY + D+WS G I+ L+ G
Sbjct: 162 TLKILDFGLARTASTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSV 221
Query: 241 PF--------WGK------TKSKIFDAVRAADLR----------------------FPSD 264
F W K T S F A +R FPS+
Sbjct: 222 IFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRPAYPGIAFEELFPDWIFPSE 281
Query: 265 P-WDHISAS-ARDLIMGMLRVDPSTRLTAAEVLAHS----WMEECEQVAQKP 310
D I S ARDL+ ML +DP R++ E L H W + E A P
Sbjct: 282 SERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPYITVWYDPAEAEAPPP 333
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 133/298 (44%), Gaps = 40/298 (13%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVD 105
+ +G G +G + D + +A K +++ + R+ + E+ ++ L H NV+
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYR-ELRLLKHLK-HENVIG 91
Query: 106 LKAVYEE----EDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
L V+ ED+ + + G + + K S+ + + L++ + Y H G
Sbjct: 92 LLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSAG 151
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAG--GY 219
++HRDLKP N+ + + S +++ DFGLA +A + + G V + +Y APE++ Y
Sbjct: 152 IIHRDLKPSNVAV---NEDSELRILDFGLAR--QADEEMTGYVATRWYRAPEIMLNWMHY 206
Query: 220 NQAADVWSAGVILYILLSGMPPFWGKTK----SKIFDAV----------------RAADL 259
NQ D+WS G I+ LL G F G +I + V R
Sbjct: 207 NQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQ 266
Query: 260 RFPSDPWDHISASAR-------DLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKP 310
P P +S+ R DL+ ML +D R++AAE LAH++ + +P
Sbjct: 267 SLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDEP 324
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 142/324 (43%), Gaps = 51/324 (15%)
Query: 34 QISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEI 93
Q+ ++ RY +G G +G++ D +A K I+ T R+++ EI+I
Sbjct: 15 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ-RTLR-EIKI 72
Query: 94 MTKLSGHPNVVDLKAVY-----EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ + H N++ + + E+ V+++ +L ++L K S
Sbjct: 73 LLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLY 129
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHG----TV 204
+++ + Y H V+HRDLKP N+LL T + +K+ DFGLA + G V
Sbjct: 130 QILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLARVADPDHDHTGFLTEYV 186
Query: 205 GSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAV-------- 254
+ +Y APE++ + GY ++ D+WS G IL +LS P F GK + +
Sbjct: 187 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPE 246
Query: 255 ------------RAADLRFPSD---PWDHI----SASARDLIMGMLRVDPSTRLTAAEVL 295
R L P PW+ + + A DL+ ML +P R+ + L
Sbjct: 247 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 306
Query: 296 AHSWMEEC-----EQVAQKPCKQD 314
AH ++E+ E +A+ P K D
Sbjct: 307 AHPYLEQYYDPSDEPIAEAPFKFD 330
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 137/308 (44%), Gaps = 40/308 (12%)
Query: 10 SQLSTQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLA 69
+ L CN + L + L +Y +G LG G FG + +A
Sbjct: 10 AHLRAAPCNDLHATKLA----PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVA 65
Query: 70 CKSIAKDRLVTVEDVRS---IKLEIEIMTKLS-GHPNVVDLKAVYEEEDYVHLLMELCAG 125
K + KDR+ ++ + + +E+ ++ K+S G V+ L +E D L++E
Sbjct: 66 IKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEP 125
Query: 126 -GELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIK 184
+LF + + G E AR F +++ V +CH GV+HRD+K ENIL+ +K
Sbjct: 126 VQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LK 183
Query: 185 LADFGLATYIKAGQNLHGTV-----GSPFYIAPEVLAGG--YNQAADVWSAGVILYILLS 237
L DFG +G L TV G+ Y PE + + ++A VWS G++LY ++
Sbjct: 184 LIDFG------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 237
Query: 238 GMPPFWGK---TKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEV 294
G PF + ++F R +S+ + LI L + PS R T E+
Sbjct: 238 GDIPFEHDEEIIRGQVFFRQR-------------VSSECQHLIRWCLALRPSDRPTFEEI 284
Query: 295 LAHSWMEE 302
H WM++
Sbjct: 285 QNHPWMQD 292
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 131/280 (46%), Gaps = 36/280 (12%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRS---IKLEIEIM 94
L +Y +G LG G FG + +A K + KDR+ ++ + + +E+ ++
Sbjct: 6 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 65
Query: 95 TKLS-GHPNVVDLKAVYEEED-YVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQ 152
K+S G V+ L +E D +V +L + +LF + + G E AR F +++
Sbjct: 66 KKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLE 125
Query: 153 VVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTV-----GSP 207
V +CH GV+HRD+K ENIL+ +KL DFG +G L TV G+
Sbjct: 126 AVRHCHNCGVLHRDIKDENILIDLNRGE--LKLIDFG------SGALLKDTVYTDFDGTR 177
Query: 208 FYIAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGK---TKSKIFDAVRAADLRFP 262
Y PE + + ++A VWS G++LY ++ G PF + ++F R
Sbjct: 178 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR------- 230
Query: 263 SDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEE 302
+S+ + LI L + PS R T E+ H WM++
Sbjct: 231 ------VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 264
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 142/324 (43%), Gaps = 51/324 (15%)
Query: 34 QISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEI 93
Q+ ++ RY +G G +G++ D +A K I+ T R+++ EI+I
Sbjct: 17 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ-RTLR-EIKI 74
Query: 94 MTKLSGHPNVVDLKAVY-----EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ + H N++ + + E+ V+++ +L ++L K S
Sbjct: 75 LLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLY 131
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHG----TV 204
+++ + Y H V+HRDLKP N+LL T + +K+ DFGLA + G V
Sbjct: 132 QILRGLKYIHSANVLHRDLKPSNLLLNT---TXDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 205 GSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAV-------- 254
+ +Y APE++ + GY ++ D+WS G IL +LS P F GK + +
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 248
Query: 255 ------------RAADLRFPSD---PWDHI----SASARDLIMGMLRVDPSTRLTAAEVL 295
R L P PW+ + + A DL+ ML +P R+ + L
Sbjct: 249 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 308
Query: 296 AHSWMEEC-----EQVAQKPCKQD 314
AH ++E+ E +A+ P K D
Sbjct: 309 AHPYLEQYYDPSDEPIAEAPFKFD 332
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 137/308 (44%), Gaps = 40/308 (12%)
Query: 10 SQLSTQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLA 69
+ L CN + L + L +Y +G LG G FG + +A
Sbjct: 25 AHLRAAPCNDLHATKLA----PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVA 80
Query: 70 CKSIAKDRLVTVEDVRS---IKLEIEIMTKLS-GHPNVVDLKAVYEEEDYVHLLMELCAG 125
K + KDR+ ++ + + +E+ ++ K+S G V+ L +E D L++E
Sbjct: 81 IKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEP 140
Query: 126 -GELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIK 184
+LF + + G E AR F +++ V +CH GV+HRD+K ENIL+ +K
Sbjct: 141 VQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LK 198
Query: 185 LADFGLATYIKAGQNLHGTV-----GSPFYIAPEVLAGG--YNQAADVWSAGVILYILLS 237
L DFG +G L TV G+ Y PE + + ++A VWS G++LY ++
Sbjct: 199 LIDFG------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 252
Query: 238 GMPPFWGK---TKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEV 294
G PF + ++F R +S+ + LI L + PS R T E+
Sbjct: 253 GDIPFEHDEEIIRGQVFFRQR-------------VSSECQHLIRWCLALRPSDRPTFEEI 299
Query: 295 LAHSWMEE 302
H WM++
Sbjct: 300 QNHPWMQD 307
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 142/324 (43%), Gaps = 51/324 (15%)
Query: 34 QISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEI 93
Q+ ++ RY +G G +G++ D +A K I+ T R+++ EI+I
Sbjct: 19 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ-RTLR-EIKI 76
Query: 94 MTKLSGHPNVVDLKAVY-----EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ + H N++ + + E+ V+++ +L ++L K S
Sbjct: 77 LLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLY 133
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHG----TV 204
+++ + Y H V+HRDLKP N+LL T + +K+ DFGLA + G V
Sbjct: 134 QILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 205 GSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAV-------- 254
+ +Y APE++ + GY ++ D+WS G IL +LS P F GK + +
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 250
Query: 255 ------------RAADLRFPSD---PWDHI----SASARDLIMGMLRVDPSTRLTAAEVL 295
R L P PW+ + + A DL+ ML +P R+ + L
Sbjct: 251 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 310
Query: 296 AHSWMEEC-----EQVAQKPCKQD 314
AH ++E+ E +A+ P K D
Sbjct: 311 AHPYLEQYYDPSDEPIAEAPFKFD 334
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 142/324 (43%), Gaps = 51/324 (15%)
Query: 34 QISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEI 93
Q+ ++ RY +G G +G++ D +A K I+ T R+++ EI+I
Sbjct: 25 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ-RTLR-EIKI 82
Query: 94 MTKLSGHPNVVDLKAVY-----EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ + H N++ + + E+ V+++ +L ++L K S
Sbjct: 83 LLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLY 139
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHG----TV 204
+++ + Y H V+HRDLKP N+LL T + +K+ DFGLA + G V
Sbjct: 140 QILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLARVADPDHDHTGFLTEYV 196
Query: 205 GSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAV-------- 254
+ +Y APE++ + GY ++ D+WS G IL +LS P F GK + +
Sbjct: 197 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 256
Query: 255 ------------RAADLRFPSD---PWDHI----SASARDLIMGMLRVDPSTRLTAAEVL 295
R L P PW+ + + A DL+ ML +P R+ + L
Sbjct: 257 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 316
Query: 296 AHSWMEEC-----EQVAQKPCKQD 314
AH ++E+ E +A+ P K D
Sbjct: 317 AHPYLEQYYDPSDEPIAEAPFKFD 340
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 142/324 (43%), Gaps = 51/324 (15%)
Query: 34 QISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEI 93
Q+ ++ RY +G G +G++ D +A K I+ T R+++ EI+I
Sbjct: 17 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ-RTLR-EIKI 74
Query: 94 MTKLSGHPNVVDLKAVY-----EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ + H N++ + + E+ V+++ +L ++L K S
Sbjct: 75 LLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLY 131
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHG----TV 204
+++ + Y H V+HRDLKP N+LL T + +K+ DFGLA + G V
Sbjct: 132 QILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 205 GSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAV-------- 254
+ +Y APE++ + GY ++ D+WS G IL +LS P F GK + +
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 248
Query: 255 ------------RAADLRFPSD---PWDHI----SASARDLIMGMLRVDPSTRLTAAEVL 295
R L P PW+ + + A DL+ ML +P R+ + L
Sbjct: 249 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 308
Query: 296 AHSWMEEC-----EQVAQKPCKQD 314
AH ++E+ E +A+ P K D
Sbjct: 309 AHPYLEQYYDPSDEPIAEAPFKFD 332
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 139/282 (49%), Gaps = 26/282 (9%)
Query: 24 SLTGTILDATQISNLSDRYV-LGKQLGWGQFGVIRECSDKFTGEVLACKSI----AKDRL 78
++ G+ +++ L+D + KQ+G G FG++ + V+A KS+ ++
Sbjct: 2 AMGGSEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGET 61
Query: 79 VTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRF 138
+E + + E+ IM+ L+ HPN+V L + ++ME G+L+HRL +
Sbjct: 62 EMIEKFQEFQREVFIMSNLN-HPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRL--LDKA 116
Query: 139 SETEARVIFRHLMQV---VSYCHGNG--VVHRDLKPENILLATKSSSSPI--KLADFGLA 191
+ V R ++ + + Y +VHRDL+ NI L + ++P+ K+ADFGL+
Sbjct: 117 HPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS 176
Query: 192 TYIKAGQNLHGTVGSPFYIAPEVLAG---GYNQAADVWSAGVILYILLSGMPPF--WGKT 246
++ ++ G +G+ ++APE + Y + AD +S +ILY +L+G PF +
Sbjct: 177 Q--QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG 234
Query: 247 KSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTR 288
K K + +R LR P+ P D R++I DP R
Sbjct: 235 KIKFINMIREEGLR-PTIPED-CPPRLRNVIELCWSGDPKKR 274
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 142/324 (43%), Gaps = 51/324 (15%)
Query: 34 QISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEI 93
Q+ ++ RY +G G +G++ D +A K I+ T R+++ EI+I
Sbjct: 17 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ-RTLR-EIKI 74
Query: 94 MTKLSGHPNVVDLKAVY-----EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ + H N++ + + E+ V+++ +L ++L K S
Sbjct: 75 LLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLY 131
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHG----TV 204
+++ + Y H V+HRDLKP N+LL T + +K+ DFGLA + G V
Sbjct: 132 QILRGLKYIHSANVLHRDLKPSNLLLNT---TXDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 205 GSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAV-------- 254
+ +Y APE++ + GY ++ D+WS G IL +LS P F GK + +
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 248
Query: 255 ------------RAADLRFPSD---PWDHI----SASARDLIMGMLRVDPSTRLTAAEVL 295
R L P PW+ + + A DL+ ML +P R+ + L
Sbjct: 249 QEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 308
Query: 296 AHSWMEEC-----EQVAQKPCKQD 314
AH ++E+ E +A+ P K D
Sbjct: 309 AHPYLEQYYDPSDEPIAEAPFKFD 332
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 135/301 (44%), Gaps = 40/301 (13%)
Query: 17 CNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKD 76
CN + L + L +Y +G LG G FG + +A K + KD
Sbjct: 5 CNDLHATKLA----PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKD 60
Query: 77 RLVTVEDVRS---IKLEIEIMTKLS-GHPNVVDLKAVYEEEDYVHLLMELCAG-GELFHR 131
R+ ++ + + +E+ ++ K+S G V+ L +E D L++E +LF
Sbjct: 61 RISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDF 120
Query: 132 LEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLA 191
+ + G E AR F +++ V +CH GV+HRD+K ENIL+ +KL DFG
Sbjct: 121 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKLIDFG-- 176
Query: 192 TYIKAGQNLHGTV-----GSPFYIAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWG 244
+G L TV G+ Y PE + + ++A VWS G++LY ++ G PF
Sbjct: 177 ----SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 232
Query: 245 K---TKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAHSWME 301
+ ++F R +S+ + LI L + PS R T E+ H WM+
Sbjct: 233 DEEIIRGQVFFRQR-------------VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 279
Query: 302 E 302
+
Sbjct: 280 D 280
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 135/301 (44%), Gaps = 40/301 (13%)
Query: 17 CNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKD 76
CN + L + L +Y +G LG G FG + +A K + KD
Sbjct: 4 CNDLHATKLA----PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKD 59
Query: 77 RLVTVEDVRS---IKLEIEIMTKLS-GHPNVVDLKAVYEEEDYVHLLMELCAG-GELFHR 131
R+ ++ + + +E+ ++ K+S G V+ L +E D L++E +LF
Sbjct: 60 RISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDF 119
Query: 132 LEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLA 191
+ + G E AR F +++ V +CH GV+HRD+K ENIL+ +KL DFG
Sbjct: 120 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKLIDFG-- 175
Query: 192 TYIKAGQNLHGTV-----GSPFYIAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWG 244
+G L TV G+ Y PE + + ++A VWS G++LY ++ G PF
Sbjct: 176 ----SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 231
Query: 245 K---TKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAHSWME 301
+ ++F R +S+ + LI L + PS R T E+ H WM+
Sbjct: 232 DEEIIRGQVFFRQR-------------VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 278
Query: 302 E 302
+
Sbjct: 279 D 279
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 142/324 (43%), Gaps = 51/324 (15%)
Query: 34 QISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEI 93
Q+ ++ RY +G G +G++ D +A K I+ T R+++ EI+I
Sbjct: 21 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ-RTLR-EIKI 78
Query: 94 MTKLSGHPNVVDLKAVY-----EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ + H N++ + + E+ V+++ +L ++L K S
Sbjct: 79 LLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLLKCQHLSNDHICYFLY 135
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHG----TV 204
+++ + Y H V+HRDLKP N+LL T + +K+ DFGLA + G V
Sbjct: 136 QILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 205 GSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAV-------- 254
+ +Y APE++ + GY ++ D+WS G IL +LS P F GK + +
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 252
Query: 255 ------------RAADLRFPSD---PWDHI----SASARDLIMGMLRVDPSTRLTAAEVL 295
R L P PW+ + + A DL+ ML +P R+ + L
Sbjct: 253 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 312
Query: 296 AHSWMEEC-----EQVAQKPCKQD 314
AH ++E+ E +A+ P K D
Sbjct: 313 AHPYLEQYYDPSDEPIAEAPFKFD 336
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 142/324 (43%), Gaps = 51/324 (15%)
Query: 34 QISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEI 93
Q+ ++ RY +G G +G++ D +A K I+ T R+++ EI+I
Sbjct: 17 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ-RTLR-EIKI 74
Query: 94 MTKLSGHPNVVDLKAVY-----EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ + H N++ + + E+ V+++ +L ++L K S
Sbjct: 75 LLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLY 131
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHG----TV 204
+++ + Y H V+HRDLKP N+LL T + +K+ DFGLA + G V
Sbjct: 132 QILRGLKYIHSANVLHRDLKPSNLLLNT---TXDLKIXDFGLARVADPDHDHTGFLTEYV 188
Query: 205 GSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAV-------- 254
+ +Y APE++ + GY ++ D+WS G IL +LS P F GK + +
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 248
Query: 255 ------------RAADLRFPSD---PWDHI----SASARDLIMGMLRVDPSTRLTAAEVL 295
R L P PW+ + + A DL+ ML +P R+ + L
Sbjct: 249 QEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 308
Query: 296 AHSWMEEC-----EQVAQKPCKQD 314
AH ++E+ E +A+ P K D
Sbjct: 309 AHPYLEQYYDPSDEPIAEAPFKFD 332
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 133/298 (44%), Gaps = 40/298 (13%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVD 105
+ +G G +G + D + +A K +++ + R+ + E+ ++ L H NV+
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYR-ELRLLKHLK-HENVIG 91
Query: 106 LKAVYEE----EDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
L V+ ED+ + + G + + K S+ + + L++ + Y H G
Sbjct: 92 LLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAG 151
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAG--GY 219
++HRDLKP N+ + + S +++ DFGLA +A + + G V + +Y APE++ Y
Sbjct: 152 IIHRDLKPSNVAV---NEDSELRILDFGLAR--QADEEMTGYVATRWYRAPEIMLNWMHY 206
Query: 220 NQAADVWSAGVILYILLSGMPPFWGKTK----SKIFDAV----------------RAADL 259
NQ D+WS G I+ LL G F G +I + V R
Sbjct: 207 NQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQ 266
Query: 260 RFPSDPWDHISASAR-------DLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKP 310
P P +S+ R DL+ ML +D R++AAE LAH++ + +P
Sbjct: 267 SLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDEP 324
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 142/324 (43%), Gaps = 51/324 (15%)
Query: 34 QISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEI 93
Q+ ++ RY +G G +G++ D +A K I+ T R+++ EI+I
Sbjct: 17 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ-RTLR-EIKI 74
Query: 94 MTKLSGHPNVVDLKAVY-----EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ + H N++ + + E+ V+++ +L ++L K S
Sbjct: 75 LLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLY 131
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHG----TV 204
+++ + Y H V+HRDLKP N+LL T + +K+ DFGLA + G V
Sbjct: 132 QILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 205 GSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAV-------- 254
+ +Y APE++ + GY ++ D+WS G IL +LS P F GK + +
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 248
Query: 255 ------------RAADLRFPSD---PWDHI----SASARDLIMGMLRVDPSTRLTAAEVL 295
R L P PW+ + + A DL+ ML +P R+ + L
Sbjct: 249 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 308
Query: 296 AHSWMEEC-----EQVAQKPCKQD 314
AH ++E+ E +A+ P K D
Sbjct: 309 AHPYLEQYYDPSDEPIAEAPFKFD 332
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 135/301 (44%), Gaps = 40/301 (13%)
Query: 17 CNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKD 76
CN + L + L +Y +G LG G FG + +A K + KD
Sbjct: 24 CNDLHATKLA----PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKD 79
Query: 77 RLVTVEDVRS---IKLEIEIMTKLS-GHPNVVDLKAVYEEEDYVHLLMELCAG-GELFHR 131
R+ ++ + + +E+ ++ K+S G V+ L +E D L++E +LF
Sbjct: 80 RISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDF 139
Query: 132 LEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLA 191
+ + G E AR F +++ V +CH GV+HRD+K ENIL+ +KL DFG
Sbjct: 140 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKLIDFG-- 195
Query: 192 TYIKAGQNLHGTV-----GSPFYIAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWG 244
+G L TV G+ Y PE + + ++A VWS G++LY ++ G PF
Sbjct: 196 ----SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 251
Query: 245 K---TKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAHSWME 301
+ ++F R +S+ + LI L + PS R T E+ H WM+
Sbjct: 252 DEEIIRGQVFFRQR-------------VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 298
Query: 302 E 302
+
Sbjct: 299 D 299
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 142/324 (43%), Gaps = 51/324 (15%)
Query: 34 QISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEI 93
Q+ ++ RY +G G +G++ D +A K I+ T R+++ EI+I
Sbjct: 37 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ-RTLR-EIKI 94
Query: 94 MTKLSGHPNVVDLKAVY-----EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ + H N++ + + E+ V+++ +L ++L K S
Sbjct: 95 LLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLY 151
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHG----TV 204
+++ + Y H V+HRDLKP N+LL T + +K+ DFGLA + G V
Sbjct: 152 QILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLARVADPDHDHTGFLTEYV 208
Query: 205 GSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAV-------- 254
+ +Y APE++ + GY ++ D+WS G IL +LS P F GK + +
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 268
Query: 255 ------------RAADLRFPSD---PWDHI----SASARDLIMGMLRVDPSTRLTAAEVL 295
R L P PW+ + + A DL+ ML +P R+ + L
Sbjct: 269 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 328
Query: 296 AHSWMEEC-----EQVAQKPCKQD 314
AH ++E+ E +A+ P K D
Sbjct: 329 AHPYLEQYYDPSDEPIAEAPFKFD 352
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 136/292 (46%), Gaps = 29/292 (9%)
Query: 30 LDATQISNLSDR---YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRS 86
LD +S L D + L + +G G +G + + TG++ A K + VT ++
Sbjct: 11 LDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD----VTGDEEEE 66
Query: 87 IKLEIEIMTKLSGHPNVVDLKAVYEE------EDYVHLLMELCAGGELFHRLE--KYGRF 138
IK EI ++ K S H N+ + + +D + L+ME C G + ++ K
Sbjct: 67 IKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTL 126
Query: 139 SETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQ 198
E I R +++ +S+ H + V+HRD+K +N+LL + ++ +KL DFG++ +
Sbjct: 127 KEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLL---TENAEVKLVDFGVSAQLDRTV 183
Query: 199 NLHGT-VGSPFYIAPEVLA------GGYNQAADVWSAGVILYILLSGMPPFWGKTKSK-I 250
T +G+P+++APEV+A Y+ +D+WS G+ + G PP + +
Sbjct: 184 GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRAL 243
Query: 251 FDAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEE 302
F R R S W S + I L + S R +++ H ++ +
Sbjct: 244 FLIPRNPAPRLKSKKW---SKKFQSFIESCLVKNHSQRPATEQLMKHPFIRD 292
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 142/324 (43%), Gaps = 51/324 (15%)
Query: 34 QISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEI 93
Q+ ++ RY +G G +G++ D +A + I+ T R+++ EI+I
Sbjct: 21 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQ-RTLR-EIKI 78
Query: 94 MTKLSGHPNVVDLKAVY-----EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ + H N++ + + E+ V+++ +L ++L K S
Sbjct: 79 LLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLY 135
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHG----TV 204
+++ + Y H V+HRDLKP N+LL T + +K+ DFGLA + G V
Sbjct: 136 QILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 205 GSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAV-------- 254
+ +Y APE++ + GY ++ D+WS G IL +LS P F GK + +
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 252
Query: 255 ------------RAADLRFPSD---PWDHI----SASARDLIMGMLRVDPSTRLTAAEVL 295
R L P PW+ + + A DL+ ML +P R+ + L
Sbjct: 253 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 312
Query: 296 AHSWMEEC-----EQVAQKPCKQD 314
AH ++E+ E +A+ P K D
Sbjct: 313 AHPYLEQYYDPSDEPIAEAPFKFD 336
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 137/308 (44%), Gaps = 40/308 (12%)
Query: 10 SQLSTQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLA 69
+ L CN + L + L +Y +G LG G FG + +A
Sbjct: 10 AHLRAAPCNDLHATKLA----PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVA 65
Query: 70 CKSIAKDRLVTVEDVRS---IKLEIEIMTKLS-GHPNVVDLKAVYEEEDYVHLLMELCAG 125
K + KDR+ ++ + + +E+ ++ K+S G V+ L +E D L++E
Sbjct: 66 IKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEP 125
Query: 126 -GELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIK 184
+LF + + G E AR F +++ V +CH GV+HRD+K ENIL+ +K
Sbjct: 126 VQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LK 183
Query: 185 LADFGLATYIKAGQNLHGTV-----GSPFYIAPEVLAGG--YNQAADVWSAGVILYILLS 237
L DFG +G L TV G+ Y PE + + ++A VWS G++LY ++
Sbjct: 184 LIDFG------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 237
Query: 238 GMPPFWGKTK---SKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEV 294
G PF + ++F R +S+ + LI L + PS R T E+
Sbjct: 238 GDIPFEHDEEIIGGQVFFRQR-------------VSSECQHLIRWCLALRPSDRPTFEEI 284
Query: 295 LAHSWMEE 302
H WM++
Sbjct: 285 QNHPWMQD 292
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 136/308 (44%), Gaps = 40/308 (12%)
Query: 10 SQLSTQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLA 69
+ L CN + L + L +Y +G LG G FG + +A
Sbjct: 25 AHLRAAPCNDLHATKLA----PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVA 80
Query: 70 CKSIAKDRLVTVEDVRS---IKLEIEIMTKLS-GHPNVVDLKAVYEEEDYVHLLMELCAG 125
K + KDR+ ++ + + +E+ ++ K+S G V+ L +E D L++E
Sbjct: 81 IKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEP 140
Query: 126 -GELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIK 184
+LF + + G E AR F +++ V +CH GV+HRD+K ENIL+ +K
Sbjct: 141 VQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LK 198
Query: 185 LADFGLATYIKAGQNLHGTV-----GSPFYIAPEVLAGG--YNQAADVWSAGVILYILLS 237
L DFG +G L TV G+ Y PE + + ++A VWS G++LY ++
Sbjct: 199 LIDFG------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 252
Query: 238 GMPPFWGK---TKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEV 294
G PF + ++F R +S + LI L + PS R T E+
Sbjct: 253 GDIPFEHDEEIIRGQVFFRQR-------------VSXECQHLIRWCLALRPSDRPTFEEI 299
Query: 295 LAHSWMEE 302
H WM++
Sbjct: 300 QNHPWMQD 307
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 137/308 (44%), Gaps = 40/308 (12%)
Query: 10 SQLSTQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLA 69
+ L CN + L + L +Y +G LG G FG + +A
Sbjct: 11 AHLRAAPCNDLHATKLA----PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVA 66
Query: 70 CKSIAKDRLVTVEDVRS---IKLEIEIMTKLS-GHPNVVDLKAVYEEEDYVHLLMELCAG 125
K + KDR+ ++ + + +E+ ++ K+S G V+ L +E D L++E
Sbjct: 67 IKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEP 126
Query: 126 -GELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIK 184
+LF + + G E AR F +++ V +CH GV+HRD+K ENIL+ +K
Sbjct: 127 VQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LK 184
Query: 185 LADFGLATYIKAGQNLHGTV-----GSPFYIAPEVLAGG--YNQAADVWSAGVILYILLS 237
L DFG +G L TV G+ Y PE + + ++A VWS G++LY ++
Sbjct: 185 LIDFG------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 238
Query: 238 GMPPFWGKTK---SKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEV 294
G PF + ++F R +S+ + LI L + PS R T E+
Sbjct: 239 GDIPFEHDEEIIGGQVFFRQR-------------VSSECQHLIRWCLALRPSDRPTFEEI 285
Query: 295 LAHSWMEE 302
H WM++
Sbjct: 286 QNHPWMQD 293
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 137/308 (44%), Gaps = 40/308 (12%)
Query: 10 SQLSTQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLA 69
+ L CN + L + L +Y +G LG G FG + +A
Sbjct: 11 AHLRAAPCNDLHATKLA----PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVA 66
Query: 70 CKSIAKDRLVTVEDVRS---IKLEIEIMTKLS-GHPNVVDLKAVYEEEDYVHLLMELCAG 125
K + KDR+ ++ + + +E+ ++ K+S G V+ L +E D L++E
Sbjct: 67 IKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEP 126
Query: 126 -GELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIK 184
+LF + + G E AR F +++ V +CH GV+HRD+K ENIL+ +K
Sbjct: 127 VQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LK 184
Query: 185 LADFGLATYIKAGQNLHGTV-----GSPFYIAPEVLAGG--YNQAADVWSAGVILYILLS 237
L DFG +G L TV G+ Y PE + + ++A VWS G++LY ++
Sbjct: 185 LIDFG------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 238
Query: 238 GMPPFWGKTK---SKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEV 294
G PF + ++F R +S+ + LI L + PS R T E+
Sbjct: 239 GDIPFEHDEEIIGGQVFFRQR-------------VSSECQHLIRWCLALRPSDRPTFEEI 285
Query: 295 LAHSWMEE 302
H WM++
Sbjct: 286 QNHPWMQD 293
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 137/308 (44%), Gaps = 40/308 (12%)
Query: 10 SQLSTQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLA 69
+ L CN + L + L +Y +G LG G FG + +A
Sbjct: 10 AHLRAAPCNDLHATKLA----PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVA 65
Query: 70 CKSIAKDRLVTVEDVRS---IKLEIEIMTKLS-GHPNVVDLKAVYEEEDYVHLLMELCAG 125
K + KDR+ ++ + + +E+ ++ K+S G V+ L +E D L++E
Sbjct: 66 IKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEP 125
Query: 126 -GELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIK 184
+LF + + G E AR F +++ V +CH GV+HRD+K ENIL+ +K
Sbjct: 126 VQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LK 183
Query: 185 LADFGLATYIKAGQNLHGTV-----GSPFYIAPEVLAGG--YNQAADVWSAGVILYILLS 237
L DFG +G L TV G+ Y PE + + ++A VWS G++LY ++
Sbjct: 184 LIDFG------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 237
Query: 238 GMPPFWGKTK---SKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEV 294
G PF + ++F R +S+ + LI L + PS R T E+
Sbjct: 238 GDIPFEHDEEIIGGQVFFRQR-------------VSSECQHLIRWCLALRPSDRPTFEEI 284
Query: 295 LAHSWMEE 302
H WM++
Sbjct: 285 QNHPWMQD 292
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 136/308 (44%), Gaps = 40/308 (12%)
Query: 10 SQLSTQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLA 69
+ L CN + L + L +Y +G LG G FG + +A
Sbjct: 30 AHLRAAPCNDLHATKLA----PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVA 85
Query: 70 CKSIAKDRLVTVEDVRS---IKLEIEIMTKLS-GHPNVVDLKAVYEEEDYVHLLMELCAG 125
K + KDR+ ++ + + +E+ ++ K+S G V+ L +E D L++E
Sbjct: 86 IKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEP 145
Query: 126 -GELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIK 184
+LF + + G E AR F +++ V +CH GV+HRD+K ENIL+ +K
Sbjct: 146 VQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LK 203
Query: 185 LADFGLATYIKAGQNLHGTV-----GSPFYIAPEVLAGG--YNQAADVWSAGVILYILLS 237
L DFG +G L TV G+ Y PE + + ++A VWS G++LY ++
Sbjct: 204 LIDFG------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 257
Query: 238 GMPPFWGK---TKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEV 294
G PF + ++F R +S + LI L + PS R T E+
Sbjct: 258 GDIPFEHDEEIIRGQVFFRQR-------------VSXECQHLIRWCLALRPSDRPTFEEI 304
Query: 295 LAHSWMEE 302
H WM++
Sbjct: 305 QNHPWMQD 312
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 130/280 (46%), Gaps = 36/280 (12%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRS---IKLEIEIM 94
L +Y +G LG G FG + +A K + KDR+ ++ + + +E+ ++
Sbjct: 7 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 95 TKLS-GHPNVVDLKAVYEEEDYVHLLMELCAG-GELFHRLEKYGRFSETEARVIFRHLMQ 152
K+S G V+ L +E D L++E +LF + + G E AR F +++
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 126
Query: 153 VVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTV-----GSP 207
V +CH GV+HRD+K ENIL+ +KL DFG +G L TV G+
Sbjct: 127 AVRHCHNCGVLHRDIKDENILIDLNRGE--LKLIDFG------SGALLKDTVYTDFDGTR 178
Query: 208 FYIAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGK---TKSKIFDAVRAADLRFP 262
Y PE + + ++A VWS G++LY ++ G PF + ++F R
Sbjct: 179 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR------- 231
Query: 263 SDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEE 302
+S+ + LI L + PS R T E+ H WM++
Sbjct: 232 ------VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 265
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 134/301 (44%), Gaps = 40/301 (13%)
Query: 17 CNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKD 76
CN + L + L +Y +G LG G FG + +A K + KD
Sbjct: 4 CNDLHATKLA----PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKD 59
Query: 77 RLVTVEDVRS---IKLEIEIMTKLS-GHPNVVDLKAVYEEEDYVHLLMELCAG-GELFHR 131
R+ ++ + + +E+ ++ K+S G V+ L +E D L++E +LF
Sbjct: 60 RISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDF 119
Query: 132 LEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLA 191
+ + G E AR F +++ V +CH GV+HRD+K ENIL+ +KL DFG
Sbjct: 120 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKLIDFG-- 175
Query: 192 TYIKAGQNLHGTV-----GSPFYIAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWG 244
+G L TV G+ Y PE + + ++A VWS G++LY ++ G PF
Sbjct: 176 ----SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 231
Query: 245 K---TKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAHSWME 301
+ ++F R +S + LI L + PS R T E+ H WM+
Sbjct: 232 DEEIIRGQVFFRQR-------------VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 278
Query: 302 E 302
+
Sbjct: 279 D 279
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 134/301 (44%), Gaps = 40/301 (13%)
Query: 17 CNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKD 76
CN + L + L +Y +G LG G FG + +A K + KD
Sbjct: 5 CNDLHATKLA----PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKD 60
Query: 77 RLVTVEDVRS---IKLEIEIMTKLS-GHPNVVDLKAVYEEEDYVHLLMELCAG-GELFHR 131
R+ ++ + + +E+ ++ K+S G V+ L +E D L++E +LF
Sbjct: 61 RISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDF 120
Query: 132 LEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLA 191
+ + G E AR F +++ V +CH GV+HRD+K ENIL+ +KL DFG
Sbjct: 121 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKLIDFG-- 176
Query: 192 TYIKAGQNLHGTV-----GSPFYIAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWG 244
+G L TV G+ Y PE + + ++A VWS G++LY ++ G PF
Sbjct: 177 ----SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 232
Query: 245 K---TKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAHSWME 301
+ ++F R +S + LI L + PS R T E+ H WM+
Sbjct: 233 DEEIIRGQVFFRQR-------------VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 279
Query: 302 E 302
+
Sbjct: 280 D 280
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 137/305 (44%), Gaps = 60/305 (19%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIA---KDRLVTVEDVRSIKLEIEIMTK 96
DRY +LG G +G + + D T E +A K I ++ V +R + L E+
Sbjct: 34 DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQ-- 91
Query: 97 LSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKY-GRFSETEARVIFRHLMQV-- 153
H N+++LK+V +HL+ E L+KY + + RVI L Q+
Sbjct: 92 ---HRNIIELKSVIHHNHRLHLIFEYAEND-----LKKYMDKNPDVSMRVIKSFLYQLIN 143
Query: 154 -VSYCHGNGVVHRDLKPENILLA-TKSSSSPI-KLADFGLATY--IKAGQNLHGTVGSPF 208
V++CH +HRDLKP+N+LL+ + +S +P+ K+ DFGLA I Q H + + +
Sbjct: 144 GVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEII-TLW 202
Query: 209 YIAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGKTK----SKIFDAVRAADLRFP 262
Y PE+L G Y+ + D+WS I +L P F G ++ KIF+ L P
Sbjct: 203 YRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEV-----LGLP 257
Query: 263 SD-PWDHISA-------------SARDLIMG-------------MLRVDPSTRLTAAEVL 295
D W ++A ++G ML +DP R++A L
Sbjct: 258 DDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNAL 317
Query: 296 AHSWM 300
H +
Sbjct: 318 EHPYF 322
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 130/280 (46%), Gaps = 36/280 (12%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRS---IKLEIEIM 94
L +Y +G LG G FG + +A K + KDR+ ++ + + +E+ ++
Sbjct: 6 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 65
Query: 95 TKLS-GHPNVVDLKAVYEEEDYVHLLMELCAG-GELFHRLEKYGRFSETEARVIFRHLMQ 152
K+S G V+ L +E D L++E +LF + + G E AR F +++
Sbjct: 66 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 125
Query: 153 VVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTV-----GSP 207
V +CH GV+HRD+K ENIL+ +KL DFG +G L TV G+
Sbjct: 126 AVRHCHNCGVLHRDIKDENILIDLNRGE--LKLIDFG------SGALLKDTVYTDFDGTR 177
Query: 208 FYIAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGK---TKSKIFDAVRAADLRFP 262
Y PE + + ++A VWS G++LY ++ G PF + ++F R
Sbjct: 178 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR------- 230
Query: 263 SDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEE 302
+S+ + LI L + PS R T E+ H WM++
Sbjct: 231 ------VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 264
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 130/280 (46%), Gaps = 36/280 (12%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRS---IKLEIEIM 94
L +Y +G LG G FG + +A K + KDR+ ++ + + +E+ ++
Sbjct: 7 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 95 TKLS-GHPNVVDLKAVYEEEDYVHLLMELCAG-GELFHRLEKYGRFSETEARVIFRHLMQ 152
K+S G V+ L +E D L++E +LF + + G E AR F +++
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 126
Query: 153 VVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTV-----GSP 207
V +CH GV+HRD+K ENIL+ +KL DFG +G L TV G+
Sbjct: 127 AVRHCHNCGVLHRDIKDENILIDLNRGE--LKLIDFG------SGALLKDTVYTDFDGTR 178
Query: 208 FYIAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGK---TKSKIFDAVRAADLRFP 262
Y PE + + ++A VWS G++LY ++ G PF + ++F R
Sbjct: 179 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR------- 231
Query: 263 SDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEE 302
+S+ + LI L + PS R T E+ H WM++
Sbjct: 232 ------VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 265
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 130/280 (46%), Gaps = 36/280 (12%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRS---IKLEIEIM 94
L +Y +G LG G FG + +A K + KDR+ ++ + + +E+ ++
Sbjct: 7 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 95 TKLS-GHPNVVDLKAVYEEEDYVHLLMELCAG-GELFHRLEKYGRFSETEARVIFRHLMQ 152
K+S G V+ L +E D L++E +LF + + G E AR F +++
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 126
Query: 153 VVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTV-----GSP 207
V +CH GV+HRD+K ENIL+ +KL DFG +G L TV G+
Sbjct: 127 AVRHCHNCGVLHRDIKDENILIDLNRGE--LKLIDFG------SGALLKDTVYTDFDGTR 178
Query: 208 FYIAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGK---TKSKIFDAVRAADLRFP 262
Y PE + + ++A VWS G++LY ++ G PF + ++F R
Sbjct: 179 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR------- 231
Query: 263 SDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEE 302
+S+ + LI L + PS R T E+ H WM++
Sbjct: 232 ------VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 265
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 131/296 (44%), Gaps = 44/296 (14%)
Query: 41 RYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH 100
+Y +++G G +G + + ++ T E++A K + D E V S L + K H
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDD--DDEGVPSSALREICLLKELKH 60
Query: 101 PNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKY-----GRFSETEARVIFRHLMQVVS 155
N+V L V + + L+ E C L+KY G + L++ +
Sbjct: 61 KNIVRLHDVLHSDKKLTLVFEFCD-----QDLKKYFDSCNGDLDPEIVKSFLFQLLKGLG 115
Query: 156 YCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGT-VGSPFYIAPEV 214
+CH V+HRDLKP+N+L+ + + +KLADFGLA + V + +Y P+V
Sbjct: 116 FCHSRNVLHRDLKPQNLLI---NRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDV 172
Query: 215 LAGG--YNQAADVWSAGVILYILLSGMPPFWG-----------------KTKSKIFDAVR 255
L G Y+ + D+WSAG I L + P + T+ + +
Sbjct: 173 LFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTK 232
Query: 256 AADLR-FPSDPW--------DHISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEE 302
D + +P P ++A+ RDL+ +L+ +P R++A E L H + +
Sbjct: 233 LPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 130/280 (46%), Gaps = 36/280 (12%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRS---IKLEIEIM 94
L +Y +G LG G FG + +A K + KDR+ ++ + + +E+ ++
Sbjct: 5 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 64
Query: 95 TKLS-GHPNVVDLKAVYEEEDYVHLLMELCAG-GELFHRLEKYGRFSETEARVIFRHLMQ 152
K+S G V+ L +E D L++E +LF + + G E AR F +++
Sbjct: 65 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 124
Query: 153 VVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTV-----GSP 207
V +CH GV+HRD+K ENIL+ +KL DFG +G L TV G+
Sbjct: 125 AVRHCHNCGVLHRDIKDENILIDLNRGE--LKLIDFG------SGALLKDTVYTDFDGTR 176
Query: 208 FYIAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGK---TKSKIFDAVRAADLRFP 262
Y PE + + ++A VWS G++LY ++ G PF + ++F R
Sbjct: 177 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR------- 229
Query: 263 SDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEE 302
+S+ + LI L + PS R T E+ H WM++
Sbjct: 230 ------VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 263
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 130/280 (46%), Gaps = 36/280 (12%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRS---IKLEIEIM 94
L +Y +G LG G FG + +A K + KDR+ ++ + + +E+ ++
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 95 TKLS-GHPNVVDLKAVYEEEDYVHLLMELCAG-GELFHRLEKYGRFSETEARVIFRHLMQ 152
K+S G V+ L +E D L++E +LF + + G E AR F +++
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 121
Query: 153 VVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTV-----GSP 207
V +CH GV+HRD+K ENIL+ +KL DFG +G L TV G+
Sbjct: 122 AVRHCHNCGVLHRDIKDENILIDLNRGE--LKLIDFG------SGALLKDTVYTDFDGTR 173
Query: 208 FYIAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGK---TKSKIFDAVRAADLRFP 262
Y PE + + ++A VWS G++LY ++ G PF + ++F R
Sbjct: 174 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR------- 226
Query: 263 SDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEE 302
+S+ + LI L + PS R T E+ H WM++
Sbjct: 227 ------VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 260
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 136/308 (44%), Gaps = 40/308 (12%)
Query: 10 SQLSTQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLA 69
+ L CN + L + L +Y +G LG G FG + +A
Sbjct: 11 AHLRAAPCNDLHATKLA----PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVA 66
Query: 70 CKSIAKDRLVTVEDVRS---IKLEIEIMTKLS-GHPNVVDLKAVYEEEDYVHLLMELCAG 125
K + KDR+ ++ + + +E+ ++ K+S G V+ L +E D L++E
Sbjct: 67 IKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEP 126
Query: 126 -GELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIK 184
+LF + + G E AR F +++ V +CH GV+HRD+K ENIL+ +K
Sbjct: 127 VQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LK 184
Query: 185 LADFGLATYIKAGQNLHGTV-----GSPFYIAPEVLAGG--YNQAADVWSAGVILYILLS 237
L DFG +G L TV G+ Y PE + + ++A VWS G++LY ++
Sbjct: 185 LIDFG------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 238
Query: 238 GMPPFWGKTK---SKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEV 294
G PF + ++F R +S + LI L + PS R T E+
Sbjct: 239 GDIPFEHDEEIIGGQVFFRQR-------------VSXECQHLIRWCLALRPSDRPTFEEI 285
Query: 295 LAHSWMEE 302
H WM++
Sbjct: 286 QNHPWMQD 293
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 129/281 (45%), Gaps = 36/281 (12%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRS---IKLEIEIM 94
L +Y +G LG G FG + +A K + KDR+ ++ + + +E+ ++
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 95 TKLS-GHPNVVDLKAVYEEEDYVHLLMELCAG-GELFHRLEKYGRFSETEARVIFRHLMQ 152
K+S G V+ L +E D L++E +LF + + G E AR F +++
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 121
Query: 153 VVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTV-----GSP 207
V +CH GV+HRD+K ENIL+ +KL DFG +G L TV G+
Sbjct: 122 AVRHCHNXGVLHRDIKDENILIDLNRGE--LKLIDFG------SGALLKDTVYTDFDGTR 173
Query: 208 FYIAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGK---TKSKIFDAVRAADLRFP 262
Y PE + + ++A VWS G++LY ++ G PF + ++F R
Sbjct: 174 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR------- 226
Query: 263 SDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEEC 303
+S + LI L + PS R T E+ H WM++
Sbjct: 227 ------VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 261
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 136/308 (44%), Gaps = 40/308 (12%)
Query: 10 SQLSTQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLA 69
+ L CN + L + L +Y +G LG G FG + +A
Sbjct: 11 AHLRAAPCNDLHATKLA----PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVA 66
Query: 70 CKSIAKDRLVTVEDVRS---IKLEIEIMTKLS-GHPNVVDLKAVYEEEDYVHLLMELCAG 125
K + KDR+ ++ + + +E+ ++ K+S G V+ L +E D L++E
Sbjct: 67 IKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEP 126
Query: 126 -GELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIK 184
+LF + + G E AR F +++ V +CH GV+HRD+K ENIL+ +K
Sbjct: 127 VQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LK 184
Query: 185 LADFGLATYIKAGQNLHGTV-----GSPFYIAPEVLAGG--YNQAADVWSAGVILYILLS 237
L DFG +G L TV G+ Y PE + + ++A VWS G++LY ++
Sbjct: 185 LIDFG------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 238
Query: 238 GMPPFWGKTK---SKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEV 294
G PF + ++F R +S + LI L + PS R T E+
Sbjct: 239 GDIPFEHDEEIIGGQVFFRQR-------------VSXECQHLIRWCLALRPSDRPTFEEI 285
Query: 295 LAHSWMEE 302
H WM++
Sbjct: 286 QNHPWMQD 293
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 136/308 (44%), Gaps = 40/308 (12%)
Query: 10 SQLSTQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLA 69
+ L CN + L + L +Y +G LG G FG + +A
Sbjct: 10 AHLRAAPCNDLHATKLA----PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVA 65
Query: 70 CKSIAKDRLVTVEDVRS---IKLEIEIMTKLS-GHPNVVDLKAVYEEEDYVHLLMELCAG 125
K + KDR+ ++ + + +E+ ++ K+S G V+ L +E D L++E
Sbjct: 66 IKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEP 125
Query: 126 -GELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIK 184
+LF + + G E AR F +++ V +CH GV+HRD+K ENIL+ +K
Sbjct: 126 VQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LK 183
Query: 185 LADFGLATYIKAGQNLHGTV-----GSPFYIAPEVLAGG--YNQAADVWSAGVILYILLS 237
L DFG +G L TV G+ Y PE + + ++A VWS G++LY ++
Sbjct: 184 LIDFG------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 237
Query: 238 GMPPFWGKTK---SKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEV 294
G PF + ++F R +S + LI L + PS R T E+
Sbjct: 238 GDIPFEHDEEIIGGQVFFRQR-------------VSXECQHLIRWCLALRPSDRPTFEEI 284
Query: 295 LAHSWMEE 302
H WM++
Sbjct: 285 QNHPWMQD 292
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 133/296 (44%), Gaps = 44/296 (14%)
Query: 41 RYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH 100
+Y +++G G +G + + ++ T E++A K + D E V S L + K H
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDD--DDEGVPSSALREICLLKELKH 60
Query: 101 PNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKY-----GRFSETEARVIFRHLMQVVS 155
N+V L V + + L+ E C L+KY G + L++ +
Sbjct: 61 KNIVRLHDVLHSDKKLTLVFEFCD-----QDLKKYFDSCNGDLDPEIVKSFLFQLLKGLG 115
Query: 156 YCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGT-VGSPFYIAPEV 214
+CH V+HRDLKP+N+L+ + + +KLA+FGLA + V + +Y P+V
Sbjct: 116 FCHSRNVLHRDLKPQNLLI---NRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDV 172
Query: 215 LAGG--YNQAADVWSAGVILYILL-SGMPPFWGK----------------TKSKIFDAVR 255
L G Y+ + D+WSAG I L +G P F G T+ + +
Sbjct: 173 LFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTK 232
Query: 256 AADLR-FPSDPW--------DHISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEE 302
D + +P P ++A+ RDL+ +L+ +P R++A E L H + +
Sbjct: 233 LPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 129/281 (45%), Gaps = 36/281 (12%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRS---IKLEIEIM 94
L +Y +G LG G FG + +A K + KDR+ ++ + + +E+ ++
Sbjct: 29 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 88
Query: 95 TKLS-GHPNVVDLKAVYEEEDYVHLLMELCAG-GELFHRLEKYGRFSETEARVIFRHLMQ 152
K+S G V+ L +E D L++E +LF + + G E AR F +++
Sbjct: 89 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 148
Query: 153 VVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTV-----GSP 207
V +CH GV+HRD+K ENIL+ +KL DFG +G L TV G+
Sbjct: 149 AVRHCHNCGVLHRDIKDENILIDLNRGE--LKLIDFG------SGALLKDTVYTDFDGTR 200
Query: 208 FYIAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGK---TKSKIFDAVRAADLRFP 262
Y PE + + ++A VWS G++LY ++ G PF + ++F R
Sbjct: 201 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR------- 253
Query: 263 SDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEEC 303
+S + LI L + PS R T E+ H WM++
Sbjct: 254 ------VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 288
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 137/328 (41%), Gaps = 59/328 (17%)
Query: 34 QISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTV--EDVRSIKLEI 91
Q+ ++ RY +G G +G++ D +A K I+ T +R IK+ +
Sbjct: 19 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILL 78
Query: 92 EI-------MTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEAR 144
+ + P + +K VY +D LME ++L K S
Sbjct: 79 AFRHENIIGINDIIRAPTIEQMKDVYIVQD----LMETD-----LYKLLKTQHLSNDHIC 129
Query: 145 VIFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHG-- 202
+++ + Y H V+HRDLKP N+LL T +S +K+ DFGLA + G
Sbjct: 130 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNT---TSDLKICDFGLARVADPDHDHTGFL 186
Query: 203 --TVGSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAV---- 254
V + +Y APE++ + GY ++ D+WS G IL +LS P F GK + +
Sbjct: 187 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 246
Query: 255 ----------------RAADLRFPSD---PWDHI----SASARDLIMGMLRVDPSTRLTA 291
R L P PW+ + + A DL+ ML +P R+
Sbjct: 247 GSPSQEDLNCGINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEV 306
Query: 292 AEVLAHSWMEEC-----EQVAQKPCKQD 314
+ LAH ++ + E +A+ P K D
Sbjct: 307 EQALAHPYLAQYYDPSDEPIAEAPFKFD 334
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 130/280 (46%), Gaps = 36/280 (12%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRS---IKLEIEIM 94
L +Y +G LG G FG + +A K + KDR+ ++ + + +E+ ++
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 95 TKLS-GHPNVVDLKAVYEEEDYVHLLMELCAG-GELFHRLEKYGRFSETEARVIFRHLMQ 152
K+S G V+ L +E D L++E +LF + + G E AR F +++
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 121
Query: 153 VVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTV-----GSP 207
V +CH GV+HRD+K ENIL+ +KL DFG +G L TV G+
Sbjct: 122 AVRHCHNCGVLHRDIKDENILIDLNRGE--LKLIDFG------SGALLKDTVYTDFDGTR 173
Query: 208 FYIAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGKTK---SKIFDAVRAADLRFP 262
Y PE + + ++A VWS G++LY ++ G PF + ++F R
Sbjct: 174 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQR------- 226
Query: 263 SDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEE 302
+S+ + LI L + PS R T E+ H WM++
Sbjct: 227 ------VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 260
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 138/282 (48%), Gaps = 26/282 (9%)
Query: 24 SLTGTILDATQISNLSDRYV-LGKQLGWGQFGVIRECSDKFTGEVLACKSI----AKDRL 78
++ G+ +++ L+D + KQ+G G FG++ + V+A KS+ ++
Sbjct: 2 AMGGSEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGET 61
Query: 79 VTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRF 138
+E + + E+ IM+ L+ HPN+V L + ++ME G+L+HRL +
Sbjct: 62 EMIEKFQEFQREVFIMSNLN-HPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRL--LDKA 116
Query: 139 SETEARVIFRHLMQV---VSYCHGNG--VVHRDLKPENILLATKSSSSPI--KLADFGLA 191
+ V R ++ + + Y +VHRDL+ NI L + ++P+ K+ADFG
Sbjct: 117 HPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG-- 174
Query: 192 TYIKAGQNLHGTVGSPFYIAPEVLAG---GYNQAADVWSAGVILYILLSGMPPF--WGKT 246
T ++ ++ G +G+ ++APE + Y + AD +S +ILY +L+G PF +
Sbjct: 175 TSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG 234
Query: 247 KSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTR 288
K K + +R LR P+ P D R++I DP R
Sbjct: 235 KIKFINMIREEGLR-PTIPED-CPPRLRNVIELCWSGDPKKR 274
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 132/298 (44%), Gaps = 40/298 (13%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVD 105
+ +G G +G + D + +A K +++ + R+ + E+ ++ L H NV+
Sbjct: 26 RPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYR-ELRLLKHLK-HENVIG 83
Query: 106 LKAVYEE----EDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
L V+ ED+ + + G + + K S+ + + L++ + Y H G
Sbjct: 84 LLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAG 143
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAG--GY 219
++HRDLKP N+ + + +++ DFGLA +A + + G V + +Y APE++ Y
Sbjct: 144 IIHRDLKPSNVAV---NEDCELRILDFGLAR--QADEEMTGYVATRWYRAPEIMLNWMHY 198
Query: 220 NQAADVWSAGVILYILLSGMPPFWGKTK----SKIFDAV----------------RAADL 259
NQ D+WS G I+ LL G F G +I + V R
Sbjct: 199 NQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQ 258
Query: 260 RFPSDPWDHISASAR-------DLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKP 310
P P +S+ R DL+ ML +D R++AAE LAH++ + +P
Sbjct: 259 SLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDEP 316
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 138/282 (48%), Gaps = 26/282 (9%)
Query: 24 SLTGTILDATQISNLSDRYV-LGKQLGWGQFGVIRECSDKFTGEVLACKSI----AKDRL 78
++ G+ +++ L+D + KQ+G G FG++ + V+A KS+ ++
Sbjct: 2 AMGGSEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGET 61
Query: 79 VTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRF 138
+E + + E+ IM+ L+ HPN+V L + ++ME G+L+HRL +
Sbjct: 62 EMIEKFQEFQREVFIMSNLN-HPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRL--LDKA 116
Query: 139 SETEARVIFRHLMQV---VSYCHGNG--VVHRDLKPENILLATKSSSSPI--KLADFGLA 191
+ V R ++ + + Y +VHRDL+ NI L + ++P+ K+ADF L+
Sbjct: 117 HPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS 176
Query: 192 TYIKAGQNLHGTVGSPFYIAPEVLAG---GYNQAADVWSAGVILYILLSGMPPF--WGKT 246
++ ++ G +G+ ++APE + Y + AD +S +ILY +L+G PF +
Sbjct: 177 Q--QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG 234
Query: 247 KSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTR 288
K K + +R LR P+ P D R++I DP R
Sbjct: 235 KIKFINMIREEGLR-PTIPED-CPPRLRNVIELCWSGDPKKR 274
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 134/305 (43%), Gaps = 59/305 (19%)
Query: 39 SDRYVLGKQLGWGQFGVIRECSDKFTGE---VLACKSIAKDRLVTVEDVRSIKLEIEIMT 95
D Y L ++LG G++ + E + E V K + K++ IK EI+I+
Sbjct: 36 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNK---------IKREIKILE 86
Query: 96 KLSGHPNVVDLKAVYEE--EDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQV 153
L G PN++ L + ++ L+ E + F +L Y ++ + R +++
Sbjct: 87 NLRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQL--YQTLTDYDIRFYMYEILKA 143
Query: 154 VSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE 213
+ YCH G++HRD+KP N+++ + ++L D+GLA + GQ + V S ++ PE
Sbjct: 144 LDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFYHPGQEYNVRVASRYFKGPE 201
Query: 214 VLAGG--YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDA-VRAADLRFPSDPWDHI- 269
+L Y+ + D+WS G +L ++ PF+ + +D VR A + D +D+I
Sbjct: 202 LLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN--YDQLVRIAKVLGTEDLYDYID 259
Query: 270 ----------------------------------SASARDLIMGMLRVDPSTRLTAAEVL 295
S A D + +LR D +RLTA E +
Sbjct: 260 KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAM 319
Query: 296 AHSWM 300
H +
Sbjct: 320 EHPYF 324
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 125/258 (48%), Gaps = 21/258 (8%)
Query: 90 EIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRH 149
E++++ + HPNV+ ++ + ++ +ELCA + +K E + +
Sbjct: 67 EVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQ 126
Query: 150 LMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIK--LADFGLATYIKAGQN----LHGT 203
+++ H +VHRDLKP NIL++ ++ IK ++DFGL + G++ G
Sbjct: 127 TTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGV 186
Query: 204 VGSPFYIAPEVLAGGYNQ----AADVWSAGVILYILLS-GMPPFWGKTKSKIFDAVRAAD 258
G+ +IAPE+L+ + D++SAG + Y ++S G PF GK+ + + + A
Sbjct: 187 PGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPF-GKSLQRQANILLGAC 245
Query: 259 LRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQ-------VAQKPC 311
P H AR+LI M+ +DP R +A VL H + E+ V+ +
Sbjct: 246 SLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWSLEKQLQFFQDVSDRIE 305
Query: 312 KQ--DDLCCKQLEVGGSS 327
K+ D KQLE GG +
Sbjct: 306 KESLDGPIVKQLERGGRA 323
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 133/301 (44%), Gaps = 40/301 (13%)
Query: 17 CNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKD 76
CN + L + L +Y +G LG G FG + +A K + KD
Sbjct: 5 CNDLHATKLA----PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKD 60
Query: 77 RLVTVEDVRS---IKLEIEIMTKLS-GHPNVVDLKAVYEEEDYVHLLMELCAG-GELFHR 131
R+ ++ + + +E+ ++ K+S G V+ L +E D L++E +LF
Sbjct: 61 RISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDF 120
Query: 132 LEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLA 191
+ + G E AR F +++ V +CH GV+HRD+K ENIL+ +KL DFG
Sbjct: 121 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE--LKLIDFG-- 176
Query: 192 TYIKAGQNLHGTV-----GSPFYIAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWG 244
+G L TV G+ Y PE + + ++A VWS G++LY ++ G PF
Sbjct: 177 ----SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 232
Query: 245 K---TKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAHSWME 301
+ ++F R +S + LI L + P R T E+ H WM+
Sbjct: 233 DEEIIRGQVFFRQR-------------VSXECQHLIRWCLALRPXDRPTFEEIQNHPWMQ 279
Query: 302 E 302
+
Sbjct: 280 D 280
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 151/336 (44%), Gaps = 55/336 (16%)
Query: 34 QISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEI 93
Q ++ RY + +G G +G++ D +A K I+ T R+++ EI+I
Sbjct: 37 QPFDVGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQ-RTLR-EIQI 94
Query: 94 MTKLSGHPNVVDLKAVY-----EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ + H NV+ ++ + E V+++ +L ++L K + S
Sbjct: 95 LLRFR-HENVIGIRDILRASTLEAMRDVYIVQDLMETD--LYKLLKSQQLSNDHICYFLY 151
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHG----TV 204
+++ + Y H V+HRDLKP N+L+ T + +K+ DFGLA + G V
Sbjct: 152 QILRGLKYIHSANVLHRDLKPSNLLINT---TCDLKICDFGLARIADPEHDHTGFLTEXV 208
Query: 205 GSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGKTKSK-------IFDAVR 255
+ +Y APE++ + GY ++ D+WS G IL +LS P F GK I +
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 268
Query: 256 AADLR-------------FPSD---PWDHI----SASARDLIMGMLRVDPSTRLTAAEVL 295
DL PS W + + A DL+ ML +P+ R+T E L
Sbjct: 269 QEDLNCIINMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEAL 328
Query: 296 AHSWMEEC-----EQVAQKP----CKQDDLCCKQLE 322
AH ++E+ E VA++P + DDL ++L+
Sbjct: 329 AHPYLEQYYDPTDEPVAEEPFTFAMELDDLPKERLK 364
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 148/352 (42%), Gaps = 71/352 (20%)
Query: 10 SQLSTQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLA 69
S++ QF S +V+ T T+L RY K +G G G++ D G +A
Sbjct: 4 SKVDNQF-YSVEVADSTFTVLK---------RYQQLKPIGSGAQGIVCAAFDTVLGINVA 53
Query: 70 CKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVY------EEEDYVHLLMELC 123
K +++ R+ + E+ ++ K H N++ L V+ EE V+L+MEL
Sbjct: 54 VKKLSRPFQNQTHAKRAYR-EL-VLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 124 AGG--ELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSS 181
++ H + R S + ++ + + H G++HRDLKP NI++ S
Sbjct: 112 DANLCQVIHMELDHERMS-----YLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDC 163
Query: 182 PIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAG-GYNQAADVWSAGVILYILLSGMP 240
+K+ DFGLA + V + +Y APEV+ G GY D+WS G I+ L+ G
Sbjct: 164 TLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCV 223
Query: 241 PF--------WGK------TKSKIFDAVRAADLR----------------------FPSD 264
F W K T S F A +R FPS+
Sbjct: 224 IFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRPKYPGIKFEELFPDWIFPSE 283
Query: 265 P-WDHISAS-ARDLIMGMLRVDPSTRLTAAEVLAHS----WMEECEQVAQKP 310
D I S ARDL+ ML +DP R++ E L H W + E A P
Sbjct: 284 SERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPYITVWYDPAEAEAPPP 335
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 140/319 (43%), Gaps = 52/319 (16%)
Query: 32 ATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEI 91
A I + +RY +G G +G + D TG +A K +++ + R+ + E+
Sbjct: 10 AKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-EL 68
Query: 92 EIMTKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARV 145
++ + H NV+ L V+ EE + V+L+ L G +L + + K + ++ +
Sbjct: 69 RLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCAKLTDDHVQF 125
Query: 146 IFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVG 205
+ +++ + Y H ++HRDLKP N+ + + +K+ DFGLA + + G V
Sbjct: 126 LIYQILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARH--TDDEMTGYVA 180
Query: 206 SPFYIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPS 263
+ +Y APE++ YNQ D+WS G I+ LL+G F G + LR
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI----LRLVG 236
Query: 264 DPWDHI-----SASAR--------------------------DLIMGMLRVDPSTRLTAA 292
P + S SAR DL+ ML +D R+TAA
Sbjct: 237 TPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 296
Query: 293 EVLAHSWMEECEQVAQKPC 311
+ LAH++ + +P
Sbjct: 297 QALAHAYFAQYHDPDDEPV 315
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 144/306 (47%), Gaps = 52/306 (16%)
Query: 47 QLGWGQFGVIRECSD-KFTGEVLACKSIAKDRLVTVED---VRSIKLEIEIMTKLSG--H 100
++G G +G + + D K G +A K + R+ T E+ + +I+ E+ ++ L H
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRV---RVQTGEEGMPLSTIR-EVAVLRHLETFEH 73
Query: 101 PNVVDLKAV-----YEEEDYVHLLMELCAGGELFHRLEKY---GRFSETEARVIFRHLMQ 152
PNVV L V + E + L+ E +L L+K G +ET ++F+ L++
Sbjct: 74 PNVVRLFDVCTVSRTDRETKLTLVFE-HVDQDLTTYLDKVPEPGVPTETIKDMMFQ-LLR 131
Query: 153 VVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAP 212
+ + H + VVHRDLKP+NIL+ +SS IKLADFGLA L V + +Y AP
Sbjct: 132 GLDFLHSHRVVHRDLKPQNILV---TSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAP 188
Query: 213 EV-LAGGYNQAADVWSAGVILYILLSGMPPFWGKTK----SKIFDAVR-------AADLR 260
EV L Y D+WS G I + P F G + KI D + D+
Sbjct: 189 EVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVA 248
Query: 261 FPSDPWDHISAS------------ARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQ 308
P + SA +DL++ L +P+ R++A L+H + ++ E+
Sbjct: 249 LPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLER--- 305
Query: 309 KPCKQD 314
CK++
Sbjct: 306 --CKEN 309
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 140/316 (44%), Gaps = 52/316 (16%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
I + +RY +G G +G + D TG +A K +++ + R+ + E+ ++
Sbjct: 19 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 77
Query: 95 TKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ H NV+ L V+ EE + V+L+ L G +L + + K + ++ + +
Sbjct: 78 KHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIY 134
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
+++ + Y H ++HRDLKP N+ + + S +K+ DFGLA + + G V + +
Sbjct: 135 QILRGLKYIHSADIIHRDLKPSNLAV---NEDSELKILDFGLARH--TDDEMTGYVATRW 189
Query: 209 YIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
Y APE++ YNQ D+WS G I+ LL+G F G + LR P
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI----LRLVGTPG 245
Query: 267 DHI-----SASAR--------------------------DLIMGMLRVDPSTRLTAAEVL 295
+ S SAR DL+ ML +D R+TAA+ L
Sbjct: 246 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 305
Query: 296 AHSWMEECEQVAQKPC 311
AH++ + +P
Sbjct: 306 AHAYFAQYHDPDDEPV 321
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 140/316 (44%), Gaps = 52/316 (16%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
I + +RY +G G +G + D TG +A K +++ + R+ + E+ ++
Sbjct: 23 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 81
Query: 95 TKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ H NV+ L V+ EE + V+L+ L G +L + + K + ++ + +
Sbjct: 82 KHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIY 138
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
+++ + Y H ++HRDLKP N+ + + S +K+ DFGLA + + G V + +
Sbjct: 139 QILRGLKYIHSADIIHRDLKPSNLAV---NEDSELKILDFGLARH--TDDEMTGYVATRW 193
Query: 209 YIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
Y APE++ YNQ D+WS G I+ LL+G F G + LR P
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI----LRLVGTPG 249
Query: 267 DHI-----SASAR--------------------------DLIMGMLRVDPSTRLTAAEVL 295
+ S SAR DL+ ML +D R+TAA+ L
Sbjct: 250 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 309
Query: 296 AHSWMEECEQVAQKPC 311
AH++ + +P
Sbjct: 310 AHAYFAQYHDPDDEPV 325
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 138/314 (43%), Gaps = 46/314 (14%)
Query: 37 NLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTK 96
++ D Y + + +G G +GV+ + TG+ +A K I V R+++ E++I+
Sbjct: 51 DVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLR-ELKILKH 109
Query: 97 LSGHPNVVDLKAV------YEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHL 150
H N++ +K + Y E V+++++L +L + + R L
Sbjct: 110 FK-HDNIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQL 167
Query: 151 MQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHG-----TVG 205
++ + Y H V+HRDLKP N+L+ + + +K+ DFG+A + H V
Sbjct: 168 LRGLKYMHSAQVIHRDLKPSNLLV---NENCELKIGDFGMARGLCTSPAEHQYFMTEYVA 224
Query: 206 SPFYIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKT---------------KS 248
+ +Y APE++ Y QA D+WS G I +L+ F GK
Sbjct: 225 TRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSP 284
Query: 249 KIFDAVRAADLR-----FPSD---PWDHI----SASARDLIMGMLRVDPSTRLTAAEVLA 296
+ AV A +R P PW+ + A L+ MLR +PS R++AA L
Sbjct: 285 AVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344
Query: 297 HSWMEECEQVAQKP 310
H ++ + +P
Sbjct: 345 HPFLAKYHDPDDEP 358
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 137/328 (41%), Gaps = 59/328 (17%)
Query: 34 QISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIA--KDRLVTVEDVRSIKLEI 91
Q+ ++ RY +G G +G++ D +A K I+ + + +R IK+ +
Sbjct: 19 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILL 78
Query: 92 EI-------MTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEAR 144
+ + P + +K VY +D LME ++L K S
Sbjct: 79 AFRHENIIGINDIIRAPTIEQMKDVYIVQD----LMETD-----LYKLLKTQHLSNDHIC 129
Query: 145 VIFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHG-- 202
+++ + Y H V+HRDLKP N+LL T + +K+ DFGLA + G
Sbjct: 130 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLARVADPDHDHTGFL 186
Query: 203 --TVGSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAV---- 254
V + +Y APE++ + GY ++ D+WS G IL +LS P F GK + +
Sbjct: 187 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 246
Query: 255 ----------------RAADLRFPSD---PWDHI----SASARDLIMGMLRVDPSTRLTA 291
R L P PW+ + + A DL+ ML +P R+
Sbjct: 247 GSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEV 306
Query: 292 AEVLAHSWMEEC-----EQVAQKPCKQD 314
+ LAH ++ + E +A+ P K D
Sbjct: 307 EQALAHPYLAQYYDPSDEPIAEAPFKFD 334
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 132/300 (44%), Gaps = 47/300 (15%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVED-VRSIKLEIEIMTKLSGH 100
Y + + L G+F I C + A K K L D +S +I I +K
Sbjct: 33 YRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDF 90
Query: 101 PN----VVDLKAVY--------EEEDYVHLLME------LCAGGELFHRLEK-YGRFSET 141
N + D+K Y D V+++ E + E F L+K Y F
Sbjct: 91 KNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPI 150
Query: 142 EA-RVIFRHLMQVVSYCHG-NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN 199
+ + I + ++ SY H + HRD+KP NIL+ + +KL+DFG + Y+ +
Sbjct: 151 QVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILM---DKNGRVKLSDFGESEYM-VDKK 206
Query: 200 LHGTVGSPFYIAPEVLAG--GYNQA-ADVWSAGVILYILLSGMPPFWGKTK-SKIFDAVR 255
+ G+ G+ ++ PE + YN A D+WS G+ LY++ + PF K ++F+ +R
Sbjct: 207 IKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIR 266
Query: 256 AADLRFPSD------PW---------DHISASARDLIMGMLRVDPSTRLTAAEVLAHSWM 300
++ +P D P + +S D + LR +P+ R+T+ + L H W+
Sbjct: 267 TKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWL 326
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 135/304 (44%), Gaps = 46/304 (15%)
Query: 37 NLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTK 96
++ D Y + + +G G +GV+ + TG+ +A K I V R+++ E++I+
Sbjct: 52 DVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLR-ELKILKH 110
Query: 97 LSGHPNVVDLKAV------YEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHL 150
H N++ +K + Y E V+++++L +L + + R L
Sbjct: 111 FK-HDNIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQL 168
Query: 151 MQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHG-----TVG 205
++ + Y H V+HRDLKP N+L+ + + +K+ DFG+A + H V
Sbjct: 169 LRGLKYMHSAQVIHRDLKPSNLLV---NENCELKIGDFGMARGLCTSPAEHQYFMTEYVA 225
Query: 206 SPFYIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKT---------------KS 248
+ +Y APE++ Y QA D+WS G I +L+ F GK
Sbjct: 226 TRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSP 285
Query: 249 KIFDAVRAADLR-----FPSD---PWDHISASAR----DLIMGMLRVDPSTRLTAAEVLA 296
+ AV A +R P PW+ + A L+ MLR +PS R++AA L
Sbjct: 286 AVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 345
Query: 297 HSWM 300
H ++
Sbjct: 346 HPFL 349
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 140/297 (47%), Gaps = 47/297 (15%)
Query: 47 QLGWGQFGVIRECSD-KFTGEVLACKSIAKDRLVTVED---VRSIKLEIEIMTKLSG--H 100
++G G +G + + D K G +A K + R+ T E+ + +I+ E+ ++ L H
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRV---RVQTGEEGMPLSTIR-EVAVLRHLETFEH 73
Query: 101 PNVVDLKAV-----YEEEDYVHLLMELCAGGELFHRLEKY---GRFSETEARVIFRHLMQ 152
PNVV L V + E + L+ E +L L+K G +ET ++F+ L++
Sbjct: 74 PNVVRLFDVCTVSRTDRETKLTLVFE-HVDQDLTTYLDKVPEPGVPTETIKDMMFQ-LLR 131
Query: 153 VVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAP 212
+ + H + VVHRDLKP+NIL+ +SS IKLADFGLA L V + +Y AP
Sbjct: 132 GLDFLHSHRVVHRDLKPQNILV---TSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAP 188
Query: 213 EV-LAGGYNQAADVWSAGVILYILLSGMPPFWGKTK----SKIFDAVR-------AADLR 260
EV L Y D+WS G I + P F G + KI D + D+
Sbjct: 189 EVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVA 248
Query: 261 FPSDPWDHISAS------------ARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQ 305
P + SA +DL++ L +P+ R++A L+H + ++ E+
Sbjct: 249 LPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLER 305
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 137/316 (43%), Gaps = 52/316 (16%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
I + +RY +G G +G + D TG +A K +++ + R+ + E+ ++
Sbjct: 37 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLL 95
Query: 95 TKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ H NV+ L V+ EE + V+L+ L G + + K + ++ + +
Sbjct: 96 KHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIY 152
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
+++ + Y H ++HRDLKP N+ + + +K+ DFGLA + + G V + +
Sbjct: 153 QILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARH--TDDEMXGXVATRW 207
Query: 209 YIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
Y APE++ YNQ D+WS G I+ LL+G F G + LR P
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI----LRLVGTPG 263
Query: 267 DHI-----SASAR--------------------------DLIMGMLRVDPSTRLTAAEVL 295
+ S SAR DL+ ML +D R+TAA+ L
Sbjct: 264 AELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 323
Query: 296 AHSWMEECEQVAQKPC 311
AH++ + +P
Sbjct: 324 AHAYFAQYHDPDDEPV 339
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 142/338 (42%), Gaps = 75/338 (22%)
Query: 41 RYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH 100
RY K +G G G++ D +A K +++ R+ + E+ +M K+ H
Sbjct: 25 RYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLM-KVVNH 82
Query: 101 PNVVDLKAVY------EEEDYVHLLMELCAGG-------ELFHRLEKYGRFSETEARVIF 147
N++ L V+ EE V+++MEL EL H Y +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY----------LL 132
Query: 148 RHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSP 207
++ + + H G++HRDLKP NI++ S + +K+ DFGLA + V +
Sbjct: 133 YQMLVGIKHLHSAGIIHRDLKPSNIVV---KSDATLKILDFGLARTAGTSFMMTPYVVTR 189
Query: 208 FYIAPEVLAG-GYNQAADVWSAGVILYILLSGMPPF--------WGKT-----------K 247
+Y APEV+ G GY + D+WS GVI+ ++ G F W K
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM 249
Query: 248 SKIFDAVRA-----------------ADLRFPSDP-WDHISAS-ARDLIMGMLRVDPSTR 288
K+ VR D+ FP+D + + AS ARDL+ ML +D S R
Sbjct: 250 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 309
Query: 289 LTAAEVLAHS----WMEECEQVAQKPCKQDDLCCKQLE 322
++ E L H W + E A P D KQL+
Sbjct: 310 ISVDEALQHPYINVWYDPSEAEAPPPKIPD----KQLD 343
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 137/316 (43%), Gaps = 52/316 (16%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
I + +RY +G G +G + D TG +A K ++K + R+ + E+ ++
Sbjct: 29 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYR-ELRLL 87
Query: 95 TKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ H NV+ L V+ EE + V+L+ L G + + K + ++ + +
Sbjct: 88 KHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIY 144
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
+++ + Y H ++HRDLKP N+ + + +K+ DFGLA + + G V + +
Sbjct: 145 QILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARH--TDDEMTGYVATRW 199
Query: 209 YIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
Y APE++ YNQ D+WS G I+ LL+G F G + LR P
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI----LRLVGTPG 255
Query: 267 DHI-----SASAR--------------------------DLIMGMLRVDPSTRLTAAEVL 295
+ S SAR DL+ ML +D R+TAA+ L
Sbjct: 256 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 315
Query: 296 AHSWMEECEQVAQKPC 311
AH++ + +P
Sbjct: 316 AHAYFAQYHDPDDEPV 331
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 140/316 (44%), Gaps = 52/316 (16%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
I + +RY +G G +G + D TG +A K +++ + R+ + E+ ++
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 75
Query: 95 TKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ H NV+ L V+ EE + V+L+ L G +L + + K + ++ + +
Sbjct: 76 KHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIY 132
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
+++ + Y H ++HRDLKP N+ + + +K+ DFGLA + + G V + +
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARH--TDDEMTGYVATRW 187
Query: 209 YIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
Y APE++ A YNQ D+WS G I+ LL+G F G + LR P
Sbjct: 188 YRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI----LRLVGTPG 243
Query: 267 DHI-----SASAR--------------------------DLIMGMLRVDPSTRLTAAEVL 295
+ S SAR DL+ ML +D R+TAA+ L
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 296 AHSWMEECEQVAQKPC 311
AH++ + +P
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 139/316 (43%), Gaps = 52/316 (16%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
I + +RY +G G +G + D TG +A K +++ + R+ + E+ ++
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 75
Query: 95 TKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ H NV+ L V+ EE + V+L+ L G +L + + K + ++ + +
Sbjct: 76 KHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKXQKLTDDHVQFLIY 132
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
+++ + Y H ++HRDLKP N+ + + +K+ DFGLA + + G V + +
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAV---NEDXELKILDFGLARH--TDDEMTGYVATRW 187
Query: 209 YIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
Y APE++ YNQ D+WS G I+ LL+G F G + LR P
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI----LRLVGTPG 243
Query: 267 DHI-----SASAR--------------------------DLIMGMLRVDPSTRLTAAEVL 295
+ S SAR DL+ ML +D R+TAA+ L
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 296 AHSWMEECEQVAQKPC 311
AH++ + +P
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 139/316 (43%), Gaps = 52/316 (16%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
I + +RY +G G +G + D TG +A K +++ + R+ + E+ ++
Sbjct: 27 IWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLL 85
Query: 95 TKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ H NV+ L V+ EE + V+L+ L G +L + + K + ++ + +
Sbjct: 86 KHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIY 142
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
+++ + Y H ++HRDLKP N+ + + +K+ DFGLA + + G V + +
Sbjct: 143 QILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARH--TDDEMTGYVATRW 197
Query: 209 YIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
Y APE++ YNQ D+WS G I+ LL+G F G + LR P
Sbjct: 198 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI----LRLVGTPG 253
Query: 267 DHI-----SASAR--------------------------DLIMGMLRVDPSTRLTAAEVL 295
+ S SAR DL+ ML +D R+TAA+ L
Sbjct: 254 AELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 313
Query: 296 AHSWMEECEQVAQKPC 311
AH++ + +P
Sbjct: 314 AHAYFAQYHDPDDEPV 329
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 139/316 (43%), Gaps = 52/316 (16%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
I + +RY +G G +G + D TG +A K +++ + R+ + E+ ++
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLL 75
Query: 95 TKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ H NV+ L V+ EE + V+L+ L G +L + + K + ++ + +
Sbjct: 76 KHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIY 132
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
+++ + Y H ++HRDLKP N+ + + +K+ DFGLA + + G V + +
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARH--TDDEMTGYVATRW 187
Query: 209 YIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
Y APE++ YNQ D+WS G I+ LL+G F G + LR P
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI----LRLVGTPG 243
Query: 267 DHI-----SASAR--------------------------DLIMGMLRVDPSTRLTAAEVL 295
+ S SAR DL+ ML +D R+TAA+ L
Sbjct: 244 AELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 296 AHSWMEECEQVAQKPC 311
AH++ + +P
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 139/316 (43%), Gaps = 52/316 (16%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
I + +RY +G G +G + D TG +A K +++ + R+ + E+ ++
Sbjct: 13 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLL 71
Query: 95 TKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ H NV+ L V+ EE + V+L+ L G +L + + K + ++ + +
Sbjct: 72 KHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIY 128
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
+++ + Y H ++HRDLKP N+ + + +K+ DFGLA + + G V + +
Sbjct: 129 QILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARH--TDDEMTGYVATRW 183
Query: 209 YIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
Y APE++ YNQ D+WS G I+ LL+G F G + LR P
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI----LRLVGTPG 239
Query: 267 DHI-----SASAR--------------------------DLIMGMLRVDPSTRLTAAEVL 295
+ S SAR DL+ ML +D R+TAA+ L
Sbjct: 240 AELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 299
Query: 296 AHSWMEECEQVAQKPC 311
AH++ + +P
Sbjct: 300 AHAYFAQYHDPDDEPV 315
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 137/316 (43%), Gaps = 52/316 (16%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
I + +RY +G G +G + D TG +A K +++ + R+ + E+ ++
Sbjct: 37 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLL 95
Query: 95 TKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ H NV+ L V+ EE + V+L+ L G + + K + ++ + +
Sbjct: 96 KHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIY 152
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
+++ + Y H ++HRDLKP N+ + + +K+ DFGLA + + G V + +
Sbjct: 153 QILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARH--TDDEMTGYVATRW 207
Query: 209 YIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
Y APE++ YNQ D+WS G I+ LL+G F G + LR P
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI----LRLVGTPG 263
Query: 267 DHI-----SASAR--------------------------DLIMGMLRVDPSTRLTAAEVL 295
+ S SAR DL+ ML +D R+TAA+ L
Sbjct: 264 AELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 323
Query: 296 AHSWMEECEQVAQKPC 311
AH++ + +P
Sbjct: 324 AHAYFAQYHDPDDEPV 339
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 137/316 (43%), Gaps = 52/316 (16%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
I + +RY +G G +G + D TG +A K +++ + R+ + E+ ++
Sbjct: 36 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLL 94
Query: 95 TKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ H NV+ L V+ EE + V+L+ L G + + K + ++ + +
Sbjct: 95 KHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIY 151
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
+++ + Y H ++HRDLKP N+ + + +K+ DFGLA + + G V + +
Sbjct: 152 QILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARH--TDDEMTGYVATRW 206
Query: 209 YIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
Y APE++ YNQ D+WS G I+ LL+G F G + LR P
Sbjct: 207 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI----LRLVGTPG 262
Query: 267 DHI-----SASAR--------------------------DLIMGMLRVDPSTRLTAAEVL 295
+ S SAR DL+ ML +D R+TAA+ L
Sbjct: 263 AELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 322
Query: 296 AHSWMEECEQVAQKPC 311
AH++ + +P
Sbjct: 323 AHAYFAQYHDPDDEPV 338
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 139/316 (43%), Gaps = 52/316 (16%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
I + +RY +G G +G + D TG +A K +++ + R+ + E+ ++
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLL 75
Query: 95 TKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ H NV+ L V+ EE + V+L+ L G +L + + K + ++ + +
Sbjct: 76 KHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIY 132
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
+++ + Y H ++HRDLKP N+ + + +K+ DFGLA + + G V + +
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARH--TDDEMAGFVATRW 187
Query: 209 YIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
Y APE++ YNQ D+WS G I+ LL+G F G + LR P
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI----LRLVGTPG 243
Query: 267 DHI-----SASAR--------------------------DLIMGMLRVDPSTRLTAAEVL 295
+ S SAR DL+ ML +D R+TAA+ L
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 296 AHSWMEECEQVAQKPC 311
AH++ + +P
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 139/316 (43%), Gaps = 52/316 (16%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
I + +RY +G G +G + D TG +A K +++ + R+ + E+ ++
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLL 75
Query: 95 TKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ H NV+ L V+ EE + V+L+ L G +L + + K + ++ + +
Sbjct: 76 KHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIY 132
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
+++ + Y H ++HRDLKP N+ + + +K+ DFGLA + + G V + +
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARH--TDDEMAGFVATRW 187
Query: 209 YIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
Y APE++ YNQ D+WS G I+ LL+G F G + LR P
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI----LRLVGTPG 243
Query: 267 DHI-----SASAR--------------------------DLIMGMLRVDPSTRLTAAEVL 295
+ S SAR DL+ ML +D R+TAA+ L
Sbjct: 244 AELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 296 AHSWMEECEQVAQKPC 311
AH++ + +P
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 139/316 (43%), Gaps = 52/316 (16%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
I + +RY +G G +G + D TG +A K +++ + R+ + E+ ++
Sbjct: 13 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLL 71
Query: 95 TKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ H NV+ L V+ EE + V+L+ L G +L + + K + ++ + +
Sbjct: 72 KHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIY 128
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
+++ + Y H ++HRDLKP N+ + + +K+ DFGLA + + G V + +
Sbjct: 129 QILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARH--TDDEMAGFVATRW 183
Query: 209 YIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
Y APE++ YNQ D+WS G I+ LL+G F G + LR P
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI----LRLVGTPG 239
Query: 267 DHI-----SASAR--------------------------DLIMGMLRVDPSTRLTAAEVL 295
+ S SAR DL+ ML +D R+TAA+ L
Sbjct: 240 AELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 299
Query: 296 AHSWMEECEQVAQKPC 311
AH++ + +P
Sbjct: 300 AHAYFAQYHDPDDEPV 315
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 139/316 (43%), Gaps = 52/316 (16%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
I + +RY +G G +G + D TG +A K +++ + R+ + E+ ++
Sbjct: 23 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLL 81
Query: 95 TKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ H NV+ L V+ EE + V+L+ L G +L + + K + ++ + +
Sbjct: 82 KHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIY 138
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
+++ + Y H ++HRDLKP N+ + + +K+ DFGLA + + G V + +
Sbjct: 139 QILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARH--TDDEMTGYVATRW 193
Query: 209 YIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
Y APE++ YNQ D+WS G I+ LL+G F G + LR P
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI----LRLVGTPG 249
Query: 267 DHI-----SASAR--------------------------DLIMGMLRVDPSTRLTAAEVL 295
+ S SAR DL+ ML +D R+TAA+ L
Sbjct: 250 AELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 309
Query: 296 AHSWMEECEQVAQKPC 311
AH++ + +P
Sbjct: 310 AHAYFAQYHDPDDEPV 325
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 139/316 (43%), Gaps = 52/316 (16%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
I + +RY +G G +G + D TG +A K +++ + R+ + E+ ++
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 75
Query: 95 TKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ H NV+ L V+ EE + V+L+ L G +L + + K + ++ + +
Sbjct: 76 KHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKXQKLTDDHVQFLIY 132
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
+++ + Y H ++HRDLKP N+ + + +K+ DFGLA + + G V + +
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARH--TDDEMTGYVATRW 187
Query: 209 YIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
Y APE++ YNQ D+WS G I+ LL+G F G + LR P
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI----LRLVGTPG 243
Query: 267 DHI-----SASAR--------------------------DLIMGMLRVDPSTRLTAAEVL 295
+ S SAR DL+ ML +D R+TAA+ L
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 296 AHSWMEECEQVAQKPC 311
AH++ + +P
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 139/316 (43%), Gaps = 52/316 (16%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
I + +RY +G G +G + D TG +A K +++ + R+ + E+ ++
Sbjct: 22 IWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 80
Query: 95 TKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ H NV+ L V+ EE + V+L+ L G +L + + K + ++ + +
Sbjct: 81 KHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIY 137
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
+++ + Y H ++HRDLKP N+ + + +K+ DFGLA + + G V + +
Sbjct: 138 QILRGLKYIHSADIIHRDLKPSNLAV---NEDXELKILDFGLARH--TDDEMTGYVATRW 192
Query: 209 YIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
Y APE++ YNQ D+WS G I+ LL+G F G + LR P
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI----LRLVGTPG 248
Query: 267 DHI-----SASAR--------------------------DLIMGMLRVDPSTRLTAAEVL 295
+ S SAR DL+ ML +D R+TAA+ L
Sbjct: 249 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 308
Query: 296 AHSWMEECEQVAQKPC 311
AH++ + +P
Sbjct: 309 AHAYFAQYHDPDDEPV 324
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 139/316 (43%), Gaps = 52/316 (16%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
I + +RY +G G +G + D TG +A K +++ + R+ + E+ ++
Sbjct: 24 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 82
Query: 95 TKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ H NV+ L V+ EE + V+L+ L G +L + + K + ++ + +
Sbjct: 83 KHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIY 139
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
+++ + Y H ++HRDLKP N+ + + +K+ DFGLA + + G V + +
Sbjct: 140 QILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARH--TADEMTGYVATRW 194
Query: 209 YIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
Y APE++ YNQ D+WS G I+ LL+G F G + LR P
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI----LRLVGTPG 250
Query: 267 DHI-----SASAR--------------------------DLIMGMLRVDPSTRLTAAEVL 295
+ S SAR DL+ ML +D R+TAA+ L
Sbjct: 251 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 310
Query: 296 AHSWMEECEQVAQKPC 311
AH++ + +P
Sbjct: 311 AHAYFAQYHDPDDEPV 326
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 137/316 (43%), Gaps = 52/316 (16%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
I + +RY +G G +G + D TG +A K +++ + R+ + E+ ++
Sbjct: 28 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 86
Query: 95 TKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ H NV+ L V+ EE + V+L+ L G + + K + ++ + +
Sbjct: 87 KHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIY 143
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
+++ + Y H ++HRDLKP N+ + + +K+ DFGLA + + G V + +
Sbjct: 144 QILRGLKYIHSADIIHRDLKPSNLAV---NEDXELKILDFGLARH--TDDEMTGYVATRW 198
Query: 209 YIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
Y APE++ YNQ D+WS G I+ LL+G F G + LR P
Sbjct: 199 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI----LRLVGTPG 254
Query: 267 DHI-----SASAR--------------------------DLIMGMLRVDPSTRLTAAEVL 295
+ S SAR DL+ ML +D R+TAA+ L
Sbjct: 255 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 314
Query: 296 AHSWMEECEQVAQKPC 311
AH++ + +P
Sbjct: 315 AHAYFAQYHDPDDEPV 330
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 137/316 (43%), Gaps = 52/316 (16%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
I + +RY +G G +G + D TG +A K +++ + R+ + E+ ++
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 75
Query: 95 TKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ H NV+ L V+ EE + V+L+ L G + + K + ++ + +
Sbjct: 76 KHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKSQKLTDDHVQFLIY 132
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
+++ + Y H ++HRDLKP N+ + + S +K+ DFGL + + G V + +
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAV---NEDSELKILDFGLCRH--TDDEMTGYVATRW 187
Query: 209 YIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
Y APE++ YNQ D+WS G I+ LL+G F G + LR P
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI----LRLVGTPG 243
Query: 267 DHI-----SASAR--------------------------DLIMGMLRVDPSTRLTAAEVL 295
+ S SAR DL+ ML +D R+TAA+ L
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 296 AHSWMEECEQVAQKPC 311
AH++ + +P
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 139/316 (43%), Gaps = 52/316 (16%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
I + +RY +G G +G + D TG +A K +++ + R+ + E+ ++
Sbjct: 24 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 82
Query: 95 TKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ H NV+ L V+ EE + V+L+ L G +L + + K + ++ + +
Sbjct: 83 KHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIY 139
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
+++ + Y H ++HRDLKP N+ + + +K+ DFGLA + + G V + +
Sbjct: 140 QILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARH--TADEMTGYVATRW 194
Query: 209 YIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
Y APE++ YNQ D+WS G I+ LL+G F G + LR P
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI----LRLVGTPG 250
Query: 267 DHI-----SASAR--------------------------DLIMGMLRVDPSTRLTAAEVL 295
+ S SAR DL+ ML +D R+TAA+ L
Sbjct: 251 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 310
Query: 296 AHSWMEECEQVAQKPC 311
AH++ + +P
Sbjct: 311 AHAYFAQYHDPDDEPV 326
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 142/338 (42%), Gaps = 75/338 (22%)
Query: 41 RYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH 100
RY K +G G G++ D +A K +++ R+ + E+ +M K+ H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLM-KVVNH 82
Query: 101 PNVVDLKAVY------EEEDYVHLLMELCAGG-------ELFHRLEKYGRFSETEARVIF 147
N++ L V+ EE V+++MEL EL H Y +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY----------LL 132
Query: 148 RHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSP 207
++ + + H G++HRDLKP NI++ S + +K+ DFGLA + V +
Sbjct: 133 YQMLVGIKHLHSAGIIHRDLKPSNIVV---KSDATLKILDFGLARTAGTSFMMTPYVVTR 189
Query: 208 FYIAPEVLAG-GYNQAADVWSAGVILYILLSGMPPF--------WGKT-----------K 247
+Y APEV+ G GY + D+WS GVI+ ++ G F W K
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM 249
Query: 248 SKIFDAVRA-----------------ADLRFPSDP-WDHISAS-ARDLIMGMLRVDPSTR 288
K+ VR D+ FP+D + + AS ARDL+ ML +D S R
Sbjct: 250 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 309
Query: 289 LTAAEVLAHS----WMEECEQVAQKPCKQDDLCCKQLE 322
++ E L H W + E A P D KQL+
Sbjct: 310 ISVDEALQHPYINVWYDPSEAEAPPPKIPD----KQLD 343
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 139/316 (43%), Gaps = 52/316 (16%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
I + +RY +G G +G + D TG +A K +++ + R+ + E+ ++
Sbjct: 40 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 98
Query: 95 TKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ H NV+ L V+ EE + V+L+ L G +L + + K + ++ + +
Sbjct: 99 KHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIY 155
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
+++ + Y H ++HRDLKP N+ + + +K+ DFGLA + + G V + +
Sbjct: 156 QILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARH--TDDEMXGYVATRW 210
Query: 209 YIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
Y APE++ YNQ D+WS G I+ LL+G F G + LR P
Sbjct: 211 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI----LRLVGTPG 266
Query: 267 DHI-----SASAR--------------------------DLIMGMLRVDPSTRLTAAEVL 295
+ S SAR DL+ ML +D R+TAA+ L
Sbjct: 267 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 326
Query: 296 AHSWMEECEQVAQKPC 311
AH++ + +P
Sbjct: 327 AHAYFAQYHDPDDEPV 342
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 150/366 (40%), Gaps = 77/366 (21%)
Query: 9 SSQLSTQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVL 68
S++ QF S +V T T+L RY K +G G G++ D +
Sbjct: 3 KSKVDNQFY-SVEVGDSTFTVLK---------RYQNLKPIGSGAQGIVCAAYDAVLDRNV 52
Query: 69 ACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVY------EEEDYVHLLMEL 122
A K +++ R+ + E+ +M K H N++ L V+ EE V+L+MEL
Sbjct: 53 AIKKLSRPFQNQTHAKRAYR-ELVLM-KXVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 123 CAGG-------ELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLA 175
EL H Y + ++ + + H G++HRDLKP NI++
Sbjct: 111 MDANLXQVIQMELDHERMSY----------LLYQMLXGIKHLHSAGIIHRDLKPSNIVV- 159
Query: 176 TKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAG-GYNQAADVWSAGVIL-- 232
S +K+ DFGLA + V + +Y APEV+ G GY + D+WS G I+
Sbjct: 160 --KSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 233 ----YILLSGM-----------------PPFWGKTKSKIFDAV----RAADLRFPSDPWD 267
IL G P F K + + + V + A L FP D
Sbjct: 218 MVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPD 277
Query: 268 HI-----------SASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKPCKQDDL 316
+ ++ ARDL+ ML +DP+ R++ + L H ++ A+ +
Sbjct: 278 SLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPPQI 337
Query: 317 CCKQLE 322
KQL+
Sbjct: 338 YDKQLD 343
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 139/316 (43%), Gaps = 52/316 (16%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
I + +RY +G G +G + D TG +A K +++ + R+ + E+ ++
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 75
Query: 95 TKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ H NV+ L V+ EE + V+L+ L G +L + + K + ++ + +
Sbjct: 76 KHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIY 132
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
+++ + Y H ++HRDLKP N+ + + +K+ DFGLA + + G V + +
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARH--TDDEMTGXVATRW 187
Query: 209 YIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
Y APE++ YNQ D+WS G I+ LL+G F G + LR P
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI----LRLVGTPG 243
Query: 267 DHI-----SASAR--------------------------DLIMGMLRVDPSTRLTAAEVL 295
+ S SAR DL+ ML +D R+TAA+ L
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 296 AHSWMEECEQVAQKPC 311
AH++ + +P
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 139/316 (43%), Gaps = 52/316 (16%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
I + +RY +G G +G + D TG +A K +++ + R+ + E+ ++
Sbjct: 24 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 82
Query: 95 TKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ H NV+ L V+ EE + V+L+ L G +L + + K + ++ + +
Sbjct: 83 KHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIY 139
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
+++ + Y H ++HRDLKP N+ + + +K+ DFGLA + + G V + +
Sbjct: 140 QILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARH--TADEMTGYVATRW 194
Query: 209 YIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
Y APE++ YNQ D+WS G I+ LL+G F G + LR P
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI----LRLVGTPG 250
Query: 267 DHI-----SASAR--------------------------DLIMGMLRVDPSTRLTAAEVL 295
+ S SAR DL+ ML +D R+TAA+ L
Sbjct: 251 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 310
Query: 296 AHSWMEECEQVAQKPC 311
AH++ + +P
Sbjct: 311 AHAYFAQYHDPDDEPV 326
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 137/316 (43%), Gaps = 52/316 (16%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
I + +RY +G G +G + D TG +A K +++ + R+ + E+ ++
Sbjct: 29 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 87
Query: 95 TKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ H NV+ L V+ EE + V+L+ L G + + K + ++ + +
Sbjct: 88 KHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIY 144
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
+++ + Y H ++HRDLKP N+ + + +K+ DFGLA + + G V + +
Sbjct: 145 QILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARH--TDDEMTGYVATRW 199
Query: 209 YIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
Y APE++ YNQ D+WS G I+ LL+G F G + LR P
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI----LRLVGTPG 255
Query: 267 DHI-----SASAR--------------------------DLIMGMLRVDPSTRLTAAEVL 295
+ S SAR DL+ ML +D R+TAA+ L
Sbjct: 256 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 315
Query: 296 AHSWMEECEQVAQKPC 311
AH++ + +P
Sbjct: 316 AHAYFAQYHDPDDEPV 331
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 137/316 (43%), Gaps = 52/316 (16%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
I + +RY +G G +G + D TG +A K +++ + R+ + E+ ++
Sbjct: 29 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 87
Query: 95 TKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ H NV+ L V+ EE + V+L+ L G + + K + ++ + +
Sbjct: 88 KHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIY 144
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
+++ + Y H ++HRDLKP N+ + + +K+ DFGLA + + G V + +
Sbjct: 145 QILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARH--TDDEMTGYVATRW 199
Query: 209 YIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
Y APE++ YNQ D+WS G I+ LL+G F G + LR P
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI----LRLVGTPG 255
Query: 267 DHI-----SASAR--------------------------DLIMGMLRVDPSTRLTAAEVL 295
+ S SAR DL+ ML +D R+TAA+ L
Sbjct: 256 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 315
Query: 296 AHSWMEECEQVAQKPC 311
AH++ + +P
Sbjct: 316 AHAYFAQYHDPDDEPV 331
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 139/316 (43%), Gaps = 52/316 (16%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
I + +RY +G G +G + D TG +A K +++ + R+ + E+ ++
Sbjct: 19 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 77
Query: 95 TKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ H NV+ L V+ EE + V+L+ L G +L + + K + ++ + +
Sbjct: 78 KHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIY 134
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
+++ + Y H ++HRDLKP N+ + + +K+ DFGLA + + G V + +
Sbjct: 135 QILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARH--TDDEMTGYVATRW 189
Query: 209 YIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
Y APE++ YNQ D+WS G I+ LL+G F G + LR P
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI----LRLVGTPG 245
Query: 267 DHI-----SASAR--------------------------DLIMGMLRVDPSTRLTAAEVL 295
+ S SAR DL+ ML +D R+TAA+ L
Sbjct: 246 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 305
Query: 296 AHSWMEECEQVAQKPC 311
AH++ + +P
Sbjct: 306 AHAYFAQYHDPDDEPV 321
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 139/316 (43%), Gaps = 52/316 (16%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
I + +RY +G G +G + D TG +A K +++ + R+ + E+ ++
Sbjct: 23 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 81
Query: 95 TKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ H NV+ L V+ EE + V+L+ L G +L + + K + ++ + +
Sbjct: 82 KHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIY 138
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
+++ + Y H ++HRDLKP N+ + + +K+ DFGLA + + G V + +
Sbjct: 139 QILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARH--TDDEMTGYVATRW 193
Query: 209 YIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
Y APE++ YNQ D+WS G I+ LL+G F G + LR P
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI----LRLVGTPG 249
Query: 267 DHI-----SASAR--------------------------DLIMGMLRVDPSTRLTAAEVL 295
+ S SAR DL+ ML +D R+TAA+ L
Sbjct: 250 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 309
Query: 296 AHSWMEECEQVAQKPC 311
AH++ + +P
Sbjct: 310 AHAYFAQYHDPDDEPV 325
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 137/316 (43%), Gaps = 52/316 (16%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
I + +RY +G G +G + D TG +A K +++ + R+ + E+ ++
Sbjct: 40 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 98
Query: 95 TKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ H NV+ L V+ EE + V+L+ L G + + K + ++ + +
Sbjct: 99 KHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIY 155
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
+++ + Y H ++HRDLKP N+ + + +K+ DFGLA + + G V + +
Sbjct: 156 QILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARH--TDDEMTGYVATRW 210
Query: 209 YIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
Y APE++ YNQ D+WS G I+ LL+G F G + LR P
Sbjct: 211 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI----LRLVGTPG 266
Query: 267 DHI-----SASAR--------------------------DLIMGMLRVDPSTRLTAAEVL 295
+ S SAR DL+ ML +D R+TAA+ L
Sbjct: 267 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 326
Query: 296 AHSWMEECEQVAQKPC 311
AH++ + +P
Sbjct: 327 AHAYFAQYHDPDDEPV 342
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 139/316 (43%), Gaps = 52/316 (16%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
I + +RY +G G +G + D TG +A K +++ + R+ + E+ ++
Sbjct: 22 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 80
Query: 95 TKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ H NV+ L V+ EE + V+L+ L G +L + + K + ++ + +
Sbjct: 81 KHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIY 137
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
+++ + Y H ++HRDLKP N+ + + +K+ DFGLA + + G V + +
Sbjct: 138 QILRGLKYIHSADIIHRDLKPSNLAV---NEDXELKILDFGLARH--TDDEMTGYVATRW 192
Query: 209 YIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
Y APE++ YNQ D+WS G I+ LL+G F G + LR P
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI----LRLVGTPG 248
Query: 267 DHI-----SASAR--------------------------DLIMGMLRVDPSTRLTAAEVL 295
+ S SAR DL+ ML +D R+TAA+ L
Sbjct: 249 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 308
Query: 296 AHSWMEECEQVAQKPC 311
AH++ + +P
Sbjct: 309 AHAYFAQYHDPDDEPV 324
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 139/316 (43%), Gaps = 52/316 (16%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
I + +RY +G G +G + D TG +A K +++ + R+ + E+ ++
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 75
Query: 95 TKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ H NV+ L V+ EE + V+L+ L G +L + + K + ++ + +
Sbjct: 76 KHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIY 132
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
+++ + Y H ++HRDLKP N+ + + +K+ DFGLA + + G V + +
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARH--TDDEMTGYVATRW 187
Query: 209 YIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
Y APE++ YNQ D+WS G I+ LL+G F G + LR P
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI----LRLVGTPG 243
Query: 267 DHI-----SASAR--------------------------DLIMGMLRVDPSTRLTAAEVL 295
+ S SAR DL+ ML +D R+TAA+ L
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 296 AHSWMEECEQVAQKPC 311
AH++ + +P
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 137/316 (43%), Gaps = 52/316 (16%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
I + +RY +G G +G + D TG +A K +++ + R+ + E+ ++
Sbjct: 28 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 86
Query: 95 TKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ H NV+ L V+ EE + V+L+ L G + + K + ++ + +
Sbjct: 87 KHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIY 143
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
+++ + Y H ++HRDLKP N+ + + +K+ DFGLA + + G V + +
Sbjct: 144 QILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARH--TDDEMTGYVATRW 198
Query: 209 YIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
Y APE++ YNQ D+WS G I+ LL+G F G + LR P
Sbjct: 199 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI----LRLVGTPG 254
Query: 267 DHI-----SASAR--------------------------DLIMGMLRVDPSTRLTAAEVL 295
+ S SAR DL+ ML +D R+TAA+ L
Sbjct: 255 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 314
Query: 296 AHSWMEECEQVAQKPC 311
AH++ + +P
Sbjct: 315 AHAYFAQYHDPDDEPV 330
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 139/316 (43%), Gaps = 52/316 (16%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
I + +RY +G G +G + D TG +A K +++ + R+ + E+ ++
Sbjct: 14 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 72
Query: 95 TKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ H NV+ L V+ EE + V+L+ L G +L + + K + ++ + +
Sbjct: 73 KHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIY 129
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
+++ + Y H ++HRDLKP N+ + + +K+ DFGLA + + G V + +
Sbjct: 130 QILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARH--TDDEMTGYVATRW 184
Query: 209 YIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
Y APE++ YNQ D+WS G I+ LL+G F G + LR P
Sbjct: 185 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI----LRLVGTPG 240
Query: 267 DHI-----SASAR--------------------------DLIMGMLRVDPSTRLTAAEVL 295
+ S SAR DL+ ML +D R+TAA+ L
Sbjct: 241 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 300
Query: 296 AHSWMEECEQVAQKPC 311
AH++ + +P
Sbjct: 301 AHAYFAQYHDPDDEPV 316
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 137/316 (43%), Gaps = 52/316 (16%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
I + +RY +G G +G + D TG +A K +++ + R+ + E+ ++
Sbjct: 15 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 73
Query: 95 TKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ H NV+ L V+ EE + V+L+ L G + + K + ++ + +
Sbjct: 74 KHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIY 130
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
+++ + Y H ++HRDLKP N+ + + +K+ DFGLA + + G V + +
Sbjct: 131 QILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARH--TDDEMTGYVATRW 185
Query: 209 YIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
Y APE++ YNQ D+WS G I+ LL+G F G + LR P
Sbjct: 186 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI----LRLVGTPG 241
Query: 267 DHI-----SASAR--------------------------DLIMGMLRVDPSTRLTAAEVL 295
+ S SAR DL+ ML +D R+TAA+ L
Sbjct: 242 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 301
Query: 296 AHSWMEECEQVAQKPC 311
AH++ + +P
Sbjct: 302 AHAYFAQYHDPDDEPV 317
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 137/316 (43%), Gaps = 52/316 (16%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
I + +RY +G G +G + D TG +A K +++ + R+ + E+ ++
Sbjct: 19 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 77
Query: 95 TKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ H NV+ L V+ EE + V+L+ L G + + K + ++ + +
Sbjct: 78 KHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIY 134
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
+++ + Y H ++HRDLKP N+ + + +K+ DFGLA + + G V + +
Sbjct: 135 QILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARH--TDDEMTGYVATRW 189
Query: 209 YIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
Y APE++ YNQ D+WS G I+ LL+G F G + LR P
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI----LRLVGTPG 245
Query: 267 DHI-----SASAR--------------------------DLIMGMLRVDPSTRLTAAEVL 295
+ S SAR DL+ ML +D R+TAA+ L
Sbjct: 246 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 305
Query: 296 AHSWMEECEQVAQKPC 311
AH++ + +P
Sbjct: 306 AHAYFAQYHDPDDEPV 321
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 139/316 (43%), Gaps = 52/316 (16%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
I + +RY +G G +G + D TG +A K +++ + R+ + E+ ++
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 75
Query: 95 TKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ H NV+ L V+ EE + V+L+ L G +L + + K + ++ + +
Sbjct: 76 KHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIY 132
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
+++ + Y H ++HRDLKP N+ + + +K+ DFGLA + + G V + +
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARH--TDDEMTGYVATRW 187
Query: 209 YIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
Y APE++ YNQ D+WS G I+ LL+G F G + LR P
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI----LRLVGTPG 243
Query: 267 DHI-----SASAR--------------------------DLIMGMLRVDPSTRLTAAEVL 295
+ S SAR DL+ ML +D R+TAA+ L
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 296 AHSWMEECEQVAQKPC 311
AH++ + +P
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 137/316 (43%), Gaps = 52/316 (16%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
I + +RY +G G +G + D TG +A K +++ + R+ + E+ ++
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 75
Query: 95 TKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ H NV+ L V+ EE + V+L+ L G + + K + ++ + +
Sbjct: 76 KHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIY 132
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
+++ + Y H ++HRDLKP N+ + + +K+ DFGLA + + G V + +
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARH--TDDEMTGYVATRW 187
Query: 209 YIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
Y APE++ YNQ D+WS G I+ LL+G F G + LR P
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI----LRLVGTPG 243
Query: 267 DHI-----SASAR--------------------------DLIMGMLRVDPSTRLTAAEVL 295
+ S SAR DL+ ML +D R+TAA+ L
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 296 AHSWMEECEQVAQKPC 311
AH++ + +P
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 137/316 (43%), Gaps = 52/316 (16%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
I + +RY +G G +G + D TG +A K +++ + R+ + E+ ++
Sbjct: 36 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 94
Query: 95 TKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ H NV+ L V+ EE + V+L+ L G + + K + ++ + +
Sbjct: 95 KHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIY 151
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
+++ + Y H ++HRDLKP N+ + + +K+ DFGLA + + G V + +
Sbjct: 152 QILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARH--TDDEMTGYVATRW 206
Query: 209 YIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
Y APE++ YNQ D+WS G I+ LL+G F G + LR P
Sbjct: 207 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI----LRLVGTPG 262
Query: 267 DHI-----SASAR--------------------------DLIMGMLRVDPSTRLTAAEVL 295
+ S SAR DL+ ML +D R+TAA+ L
Sbjct: 263 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 322
Query: 296 AHSWMEECEQVAQKPC 311
AH++ + +P
Sbjct: 323 AHAYFAQYHDPDDEPV 338
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 139/316 (43%), Gaps = 52/316 (16%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
I + +RY +G G +G + D TG +A K +++ + R+ + E+ ++
Sbjct: 14 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 72
Query: 95 TKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ H NV+ L V+ EE + V+L+ L G +L + + K + ++ + +
Sbjct: 73 KHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIY 129
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
+++ + Y H ++HRDLKP N+ + + +K+ DFGLA + + G V + +
Sbjct: 130 QILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARH--TDDEMTGYVATRW 184
Query: 209 YIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
Y APE++ YNQ D+WS G I+ LL+G F G + LR P
Sbjct: 185 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI----LRLVGTPG 240
Query: 267 DHI-----SASAR--------------------------DLIMGMLRVDPSTRLTAAEVL 295
+ S SAR DL+ ML +D R+TAA+ L
Sbjct: 241 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 300
Query: 296 AHSWMEECEQVAQKPC 311
AH++ + +P
Sbjct: 301 AHAYFAQYHDPDDEPV 316
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 139/316 (43%), Gaps = 52/316 (16%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
I + +RY +G G +G + D TG +A K +++ + R+ + E+ ++
Sbjct: 23 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 81
Query: 95 TKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ H NV+ L V+ EE + V+L+ L G +L + + K + ++ + +
Sbjct: 82 KHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIY 138
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
+++ + Y H ++HRDLKP N+ + + +K+ DFGLA + + G V + +
Sbjct: 139 QILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARH--TDDEMTGYVATRW 193
Query: 209 YIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
Y APE++ YNQ D+WS G I+ LL+G F G + LR P
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI----LRLVGTPG 249
Query: 267 DHI-----SASAR--------------------------DLIMGMLRVDPSTRLTAAEVL 295
+ S SAR DL+ ML +D R+TAA+ L
Sbjct: 250 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 309
Query: 296 AHSWMEECEQVAQKPC 311
AH++ + +P
Sbjct: 310 AHAYFAQYHDPDDEPV 325
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 139/316 (43%), Gaps = 52/316 (16%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
I + +RY +G G +G + D TG +A K +++ + R+ + E+ ++
Sbjct: 13 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 71
Query: 95 TKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ H NV+ L V+ EE + V+L+ L G +L + + K + ++ + +
Sbjct: 72 KHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIY 128
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
+++ + Y H ++HRDLKP N+ + + +K+ DFGLA + + G V + +
Sbjct: 129 QILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARH--TDDEMTGYVATRW 183
Query: 209 YIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
Y APE++ YNQ D+WS G I+ LL+G F G + LR P
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI----LRLVGTPG 239
Query: 267 DHI-----SASAR--------------------------DLIMGMLRVDPSTRLTAAEVL 295
+ S SAR DL+ ML +D R+TAA+ L
Sbjct: 240 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 299
Query: 296 AHSWMEECEQVAQKPC 311
AH++ + +P
Sbjct: 300 AHAYFAQYHDPDDEPV 315
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 139/316 (43%), Gaps = 52/316 (16%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
I + +RY +G G +G + D TG +A K +++ + R+ + E+ ++
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 75
Query: 95 TKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ H NV+ L V+ EE + V+L+ L G +L + + K + ++ + +
Sbjct: 76 KHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIY 132
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
+++ + Y H ++HRDLKP N+ + + +K+ DFGLA + + G V + +
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARH--TDDEMTGYVATRW 187
Query: 209 YIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
Y APE++ YNQ D+WS G I+ LL+G F G + LR P
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI----LRLVGTPG 243
Query: 267 DHI-----SASAR--------------------------DLIMGMLRVDPSTRLTAAEVL 295
+ S SAR DL+ ML +D R+TAA+ L
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 296 AHSWMEECEQVAQKPC 311
AH++ + +P
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 139/316 (43%), Gaps = 52/316 (16%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
I + +RY +G G +G + D TG +A K +++ + R+ + E+ ++
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 75
Query: 95 TKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ H NV+ L V+ EE + V+L+ L G +L + + K + ++ + +
Sbjct: 76 KHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIY 132
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
+++ + Y H ++HRDLKP N+ + + +K+ DFGLA + + G V + +
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARH--TDDEMTGYVATRW 187
Query: 209 YIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
Y APE++ YNQ D+WS G I+ LL+G F G + LR P
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI----LRLVGTPG 243
Query: 267 DHI-----SASAR--------------------------DLIMGMLRVDPSTRLTAAEVL 295
+ S SAR DL+ ML +D R+TAA+ L
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 296 AHSWMEECEQVAQKPC 311
AH++ + +P
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 139/316 (43%), Gaps = 52/316 (16%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
I + +RY +G G +G + D TG +A K +++ + R+ + E+ ++
Sbjct: 22 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 80
Query: 95 TKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ H NV+ L V+ EE + V+L+ L G +L + + K + ++ + +
Sbjct: 81 KHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIY 137
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
+++ + Y H ++HRDLKP N+ + + +K+ DFGLA + + G V + +
Sbjct: 138 QILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARH--TDDEMTGYVATRW 192
Query: 209 YIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
Y APE++ YNQ D+WS G I+ LL+G F G + LR P
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI----LRLVGTPG 248
Query: 267 DHI-----SASAR--------------------------DLIMGMLRVDPSTRLTAAEVL 295
+ S SAR DL+ ML +D R+TAA+ L
Sbjct: 249 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 308
Query: 296 AHSWMEECEQVAQKPC 311
AH++ + +P
Sbjct: 309 AHAYFAQYHDPDDEPV 324
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 139/316 (43%), Gaps = 52/316 (16%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
I + +RY +G G +G + D TG +A K +++ + R+ + E+ ++
Sbjct: 16 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 74
Query: 95 TKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ H NV+ L V+ EE + V+L+ L G +L + + K + ++ + +
Sbjct: 75 KHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIY 131
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
+++ + Y H ++HRDLKP N+ + + +K+ DFGLA + + G V + +
Sbjct: 132 QILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARH--TDDEMTGYVATRW 186
Query: 209 YIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
Y APE++ YNQ D+WS G I+ LL+G F G + LR P
Sbjct: 187 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI----LRLVGTPG 242
Query: 267 DHI-----SASAR--------------------------DLIMGMLRVDPSTRLTAAEVL 295
+ S SAR DL+ ML +D R+TAA+ L
Sbjct: 243 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 302
Query: 296 AHSWMEECEQVAQKPC 311
AH++ + +P
Sbjct: 303 AHAYFAQYHDPDDEPV 318
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 139/316 (43%), Gaps = 52/316 (16%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
I + +RY +G G +G + D TG +A K +++ + R+ + E+ ++
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 75
Query: 95 TKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ H NV+ L V+ EE + V+L+ L G +L + + K + ++ + +
Sbjct: 76 KHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIY 132
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
+++ + Y H ++HRDLKP N+ + + +K+ DFGLA + + G V + +
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARH--TDDEMTGYVATRW 187
Query: 209 YIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
Y APE++ YNQ D+WS G I+ LL+G F G + LR P
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI----LRLVGTPG 243
Query: 267 DHI-----SASAR--------------------------DLIMGMLRVDPSTRLTAAEVL 295
+ S SAR DL+ ML +D R+TAA+ L
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 296 AHSWMEECEQVAQKPC 311
AH++ + +P
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 139/316 (43%), Gaps = 52/316 (16%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
I + +RY +G G +G + D TG +A K +++ + R+ + E+ ++
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 75
Query: 95 TKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ H NV+ L V+ EE + V+L+ L G +L + + K + ++ + +
Sbjct: 76 KHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIY 132
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
+++ + Y H ++HRDLKP N+ + + +K+ DFGLA + + G V + +
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARH--TDDEMTGYVATRW 187
Query: 209 YIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
Y APE++ YNQ D+WS G I+ LL+G F G + LR P
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI----LRLVGTPG 243
Query: 267 DHI-----SASAR--------------------------DLIMGMLRVDPSTRLTAAEVL 295
+ S SAR DL+ ML +D R+TAA+ L
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 296 AHSWMEECEQVAQKPC 311
AH++ + +P
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 139/316 (43%), Gaps = 52/316 (16%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
I + +RY +G G +G + D TG +A K +++ + R+ + E+ ++
Sbjct: 24 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 82
Query: 95 TKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ H NV+ L V+ EE + V+L+ L G +L + + K + ++ + +
Sbjct: 83 KHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIY 139
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
+++ + Y H ++HRDLKP N+ + + +K+ DFGLA + + G V + +
Sbjct: 140 QILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARH--TDDEMTGYVATRW 194
Query: 209 YIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
Y APE++ YNQ D+WS G I+ LL+G F G + LR P
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI----LRLVGTPG 250
Query: 267 DHI-----SASAR--------------------------DLIMGMLRVDPSTRLTAAEVL 295
+ S SAR DL+ ML +D R+TAA+ L
Sbjct: 251 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 310
Query: 296 AHSWMEECEQVAQKPC 311
AH++ + +P
Sbjct: 311 AHAYFAQYHDPDDEPV 326
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 137/316 (43%), Gaps = 52/316 (16%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
I + +RY +G G +G + D TG +A K +++ + R+ + E+ ++
Sbjct: 37 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 95
Query: 95 TKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ H NV+ L V+ EE + V+L+ L G + + K + ++ + +
Sbjct: 96 KHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIY 152
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
+++ + Y H ++HRDLKP N+ + + +K+ DFGLA + + G V + +
Sbjct: 153 QILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARH--TDDEMTGYVATRW 207
Query: 209 YIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
Y APE++ YNQ D+WS G I+ LL+G F G + LR P
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI----LRLVGTPG 263
Query: 267 DHI-----SASAR--------------------------DLIMGMLRVDPSTRLTAAEVL 295
+ S SAR DL+ ML +D R+TAA+ L
Sbjct: 264 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 323
Query: 296 AHSWMEECEQVAQKPC 311
AH++ + +P
Sbjct: 324 AHAYFAQYHDPDDEPV 339
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 139/316 (43%), Gaps = 52/316 (16%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
I + +RY +G G +G + D TG +A K +++ + R+ + E+ ++
Sbjct: 22 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 80
Query: 95 TKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ H NV+ L V+ EE + V+L+ L G +L + + K + ++ + +
Sbjct: 81 KHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIY 137
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
+++ + Y H ++HRDLKP N+ + + +K+ DFGLA + + G V + +
Sbjct: 138 QILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARH--TDDEMTGYVATRW 192
Query: 209 YIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
Y APE++ YNQ D+WS G I+ LL+G F G + LR P
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI----LRLVGTPG 248
Query: 267 DHI-----SASAR--------------------------DLIMGMLRVDPSTRLTAAEVL 295
+ S SAR DL+ ML +D R+TAA+ L
Sbjct: 249 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 308
Query: 296 AHSWMEECEQVAQKPC 311
AH++ + +P
Sbjct: 309 AHAYFAQYHDPDDEPV 324
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 137/316 (43%), Gaps = 52/316 (16%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
I + +RY +G G +G + D TG +A K +++ + R+ + E+ ++
Sbjct: 19 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 77
Query: 95 TKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ H NV+ L V+ EE + V+L+ L G + + K + ++ + +
Sbjct: 78 KHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIY 134
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
+++ + Y H ++HRDLKP N+ + + +K+ DFGLA + + G V + +
Sbjct: 135 QILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARH--TDDEMTGYVATRW 189
Query: 209 YIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
Y APE++ YNQ D+WS G I+ LL+G F G + LR P
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI----LRLVGTPG 245
Query: 267 DHI-----SASAR--------------------------DLIMGMLRVDPSTRLTAAEVL 295
+ S SAR DL+ ML +D R+TAA+ L
Sbjct: 246 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 305
Query: 296 AHSWMEECEQVAQKPC 311
AH++ + +P
Sbjct: 306 AHAYFAQYHDPDDEPV 321
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 150/366 (40%), Gaps = 77/366 (21%)
Query: 9 SSQLSTQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVL 68
S++ QF S +V T T+L RY K +G G G++ D +
Sbjct: 3 KSKVDNQFY-SVEVGDSTFTVLK---------RYQNLKPIGSGAQGIVCAAYDAVLDRNV 52
Query: 69 ACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVY------EEEDYVHLLMEL 122
A K +++ R+ + E+ +M K H N++ L V+ EE V+L+MEL
Sbjct: 53 AIKKLSRPFQNQTHAKRAYR-ELVLM-KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 123 CAGG-------ELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLA 175
EL H Y + ++ + + H G++HRDLKP NI++
Sbjct: 111 MDANLXQVIQMELDHERMSY----------LLYQMLXGIKHLHSAGIIHRDLKPSNIVV- 159
Query: 176 TKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAG-GYNQAADVWSAGVIL-- 232
S +K+ DFGLA + V + +Y APEV+ G GY + D+WS G I+
Sbjct: 160 --KSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 233 ----YILLSGM-----------------PPFWGKTKSKIFDAV----RAADLRFPSDPWD 267
IL G P F K + + + V + A L FP D
Sbjct: 218 MVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPD 277
Query: 268 HI-----------SASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKPCKQDDL 316
+ ++ ARDL+ ML +DP+ R++ + L H ++ A+ +
Sbjct: 278 SLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPPQI 337
Query: 317 CCKQLE 322
KQL+
Sbjct: 338 YDKQLD 343
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 146/357 (40%), Gaps = 81/357 (22%)
Query: 10 SQLSTQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLA 69
S++ QF S +V T T+L RY K +G G G++ D +A
Sbjct: 42 SKVDNQF-YSVEVGDSTFTVLK---------RYQNLKPIGSGAQGIVCAAYDAVLDRNVA 91
Query: 70 CKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVY------EEEDYVHLLMELC 123
K +++ R+ + E+ +M K H N++ L V+ EE V+L+MEL
Sbjct: 92 IKKLSRPFQNQTHAKRAYR-ELVLM-KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 149
Query: 124 AGG-------ELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLAT 176
EL H Y + ++ + + H G++HRDLKP NI++
Sbjct: 150 DANLCQVIQMELDHERMSY----------LLYQMLCGIKHLHSAGIIHRDLKPSNIVV-- 197
Query: 177 KSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAG-GYNQAADVWSAGVIL--- 232
S +K+ DFGLA + V + +Y APEV+ G GY + D+WS G I+
Sbjct: 198 -KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 256
Query: 233 ---YILLSGM-----------------PPFWGKTKSKIFDAV----RAADLRFPSDPWDH 268
IL G P F K + + + V + A L FP D
Sbjct: 257 VRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDS 316
Query: 269 I-----------SASARDLIMGMLRVDPSTRLTAAEVLAHS----WMEECEQVAQKP 310
+ ++ ARDL+ ML +DP+ R++ + L H W + E A P
Sbjct: 317 LFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPP 373
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 139/338 (41%), Gaps = 75/338 (22%)
Query: 41 RYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH 100
RY K +G G G++ D +A K +++ R+ + E+ +M K H
Sbjct: 18 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLM-KCVNH 75
Query: 101 PNVVDLKAVY------EEEDYVHLLMELCAGG-------ELFHRLEKYGRFSETEARVIF 147
N++ L V+ EE V+L+MEL EL H Y +
Sbjct: 76 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSY----------LL 125
Query: 148 RHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSP 207
++ + + H G++HRDLKP NI++ S +K+ DFGLA + V +
Sbjct: 126 YQMLXGIKHLHSAGIIHRDLKPSNIVV---KSDXTLKILDFGLARTAGTSFMMTPYVVTR 182
Query: 208 FYIAPEVLAG-GYNQAADVWSAGVIL------YILLSGM-----------------PPFW 243
+Y APEV+ G GY + D+WS G I+ IL G P F
Sbjct: 183 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFM 242
Query: 244 GKTKSKIFDAV----RAADLRFPSDPWDHI-----------SASARDLIMGMLRVDPSTR 288
K + + + V + A L FP D + ++ ARDL+ ML +DP+ R
Sbjct: 243 KKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKR 302
Query: 289 LTAAEVLAHS----WMEECEQVAQKPCKQDDLCCKQLE 322
++ + L H W + E A P D KQL+
Sbjct: 303 ISVDDALQHPYINVWYDPAEVEAPPPQIYD----KQLD 336
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 126/267 (47%), Gaps = 20/267 (7%)
Query: 40 DRYVLGKQLGWGQFGVIRE---CSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTK 96
+R LG+ +G GQFG + + S + +A K+ T + VR L+ + +
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN---CTSDSVREKFLQEALTMR 66
Query: 97 LSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR--HLMQVV 154
HP++V L V E + V ++MELC GEL L+ +FS A +I L +
Sbjct: 67 QFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQ-VRKFSLDLASLILYAYQLSTAL 124
Query: 155 SYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGS-PF-YIAP 212
+Y VHRD+ N+L+ SS+ +KL DFGL+ Y++ + G P ++AP
Sbjct: 125 AYLESKRFVHRDIAARNVLV---SSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAP 181
Query: 213 EVLA-GGYNQAADVWSAGVILY-ILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHIS 270
E + + A+DVW GV ++ IL+ G+ PF G + + + + R P P +
Sbjct: 182 ESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLPMPP--NCP 238
Query: 271 ASARDLIMGMLRVDPSTRLTAAEVLAH 297
+ L+ DPS R E+ A
Sbjct: 239 PTLYSLMTKCWAYDPSRRPRFTELKAQ 265
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 119/250 (47%), Gaps = 36/250 (14%)
Query: 68 LACKSIAKDRLVTVEDVRS---IKLEIEIMTKLS-GHPNVVDLKAVYEEEDYVHLLMELC 123
+A K + KDR+ ++ + + +E+ ++ K+S G V+ L +E D L++E
Sbjct: 79 VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERP 138
Query: 124 AG-GELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSP 182
+LF + + G E AR F +++ V +CH GV+HRD+K ENIL+
Sbjct: 139 EPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE-- 196
Query: 183 IKLADFGLATYIKAGQNLHGTV-----GSPFYIAPEVLAGG--YNQAADVWSAGVILYIL 235
+KL DFG +G L TV G+ Y PE + + ++A VWS G++LY +
Sbjct: 197 LKLIDFG------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 250
Query: 236 LSGMPPFWGK---TKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAA 292
+ G PF + ++F R +S+ + LI L + PS R T
Sbjct: 251 VCGDIPFEHDEEIIRGQVFFRQR-------------VSSECQHLIRWCLALRPSDRPTFE 297
Query: 293 EVLAHSWMEE 302
E+ H WM++
Sbjct: 298 EIQNHPWMQD 307
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 137/293 (46%), Gaps = 47/293 (16%)
Query: 47 QLGWGQFGVIRECSD-KFTGEVLACKSIAKDRLVTVED---VRSIKLEIEIMTKLSG--H 100
++G G +G + + D K G +A K + R+ T E+ + +I+ E+ ++ L H
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRV---RVQTGEEGMPLSTIR-EVAVLRHLETFEH 73
Query: 101 PNVVDLKAV-----YEEEDYVHLLMELCAGGELFHRLEKY---GRFSETEARVIFRHLMQ 152
PNVV L V + E + L+ E +L L+K G +ET ++F+ L++
Sbjct: 74 PNVVRLFDVCTVSRTDRETKLTLVFE-HVDQDLTTYLDKVPEPGVPTETIKDMMFQ-LLR 131
Query: 153 VVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAP 212
+ + H + VVHRDLKP+NIL+ +SS IKLADFGLA L V + +Y AP
Sbjct: 132 GLDFLHSHRVVHRDLKPQNILV---TSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAP 188
Query: 213 EV-LAGGYNQAADVWSAGVILYILLSGMPPFWGKTK----SKIFDAVR-------AADLR 260
EV L Y D+WS G I + P F G + KI D + D+
Sbjct: 189 EVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVA 248
Query: 261 FPSDPWDHISAS------------ARDLIMGMLRVDPSTRLTAAEVLAHSWME 301
P + SA +DL++ L +P+ R++A L+H + +
Sbjct: 249 LPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 103/217 (47%), Gaps = 20/217 (9%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
++L LG G + K TG++ A K + DV+ E E++ KL+ H
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQM--REFEVLKKLN-HK 67
Query: 102 NVVDLKAVYEEEDYVH--LLMELCAGGELFHRLEK----YGRFSETEARVIFRHLMQVVS 155
N+V L A+ EE H L+ME C G L+ LE+ YG E+E ++ R ++ ++
Sbjct: 68 NIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYG-LPESEFLIVLRDVVGGMN 126
Query: 156 YCHGNGVVHRDLKPENIL-LATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEV 214
+ NG+VHR++KP NI+ + + S KL DFG A ++ + G+ Y+ P++
Sbjct: 127 HLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPDM 186
Query: 215 LAGG---------YNQAADVWSAGVILYILLSGMPPF 242
Y D+WS GV Y +G PF
Sbjct: 187 YERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 146/358 (40%), Gaps = 81/358 (22%)
Query: 9 SSQLSTQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVL 68
S++ QF S +V T T+L RY K +G G G++ D +
Sbjct: 4 KSKVDNQFY-SVEVGDSTFTVLK---------RYQNLKPIGSGAQGIVCAAYDAVLDRNV 53
Query: 69 ACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVY------EEEDYVHLLMEL 122
A K +++ R+ + E+ +M K H N++ L V+ EE V+L+MEL
Sbjct: 54 AIKKLSRPFQNQTHAKRAYR-ELVLM-KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 111
Query: 123 CAGG-------ELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLA 175
EL H Y + ++ + + H G++HRDLKP NI++
Sbjct: 112 MDANLCQVIQMELDHERMSY----------LLYQMLCGIKHLHSAGIIHRDLKPSNIVV- 160
Query: 176 TKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAG-GYNQAADVWSAGVIL-- 232
S +K+ DFGLA + V + +Y APEV+ G GY + D+WS G I+
Sbjct: 161 --KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 218
Query: 233 ----YILLSGM-----------------PPFWGKTKSKIFDAV----RAADLRFPSDPWD 267
IL G P F K + + + V + A L FP D
Sbjct: 219 MVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPD 278
Query: 268 HI-----------SASARDLIMGMLRVDPSTRLTAAEVLAHS----WMEECEQVAQKP 310
+ ++ ARDL+ ML +DP+ R++ + L H W + E A P
Sbjct: 279 SLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPP 336
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 103/217 (47%), Gaps = 20/217 (9%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
++L LG G + K TG++ A K + DV+ E E++ KL+ H
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ--MREFEVLKKLN-HK 67
Query: 102 NVVDLKAVYEEEDYVH--LLMELCAGGELFHRLEK----YGRFSETEARVIFRHLMQVVS 155
N+V L A+ EE H L+ME C G L+ LE+ YG E+E ++ R ++ ++
Sbjct: 68 NIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYG-LPESEFLIVLRDVVGGMN 126
Query: 156 YCHGNGVVHRDLKPENIL-LATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEV 214
+ NG+VHR++KP NI+ + + S KL DFG A ++ + G+ Y+ P++
Sbjct: 127 HLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDM 186
Query: 215 LAGG---------YNQAADVWSAGVILYILLSGMPPF 242
Y D+WS GV Y +G PF
Sbjct: 187 YERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 146/357 (40%), Gaps = 81/357 (22%)
Query: 10 SQLSTQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLA 69
S++ QF S +V T T+L RY K +G G G++ D +A
Sbjct: 42 SKVDNQFY-SVEVGDSTFTVLK---------RYQNLKPIGSGAQGIVCAAYDAVLDRNVA 91
Query: 70 CKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVY------EEEDYVHLLMELC 123
K +++ R+ + E+ +M K H N++ L V+ EE V+L+MEL
Sbjct: 92 IKKLSRPFQNQTHAKRAYR-ELVLM-KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 149
Query: 124 AGG-------ELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLAT 176
EL H Y + ++ + + H G++HRDLKP NI++
Sbjct: 150 DANLCQVIQMELDHERMSY----------LLYQMLCGIKHLHSAGIIHRDLKPSNIVV-- 197
Query: 177 KSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAG-GYNQAADVWSAGVIL--- 232
S +K+ DFGLA + V + +Y APEV+ G GY + D+WS G I+
Sbjct: 198 -KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 256
Query: 233 ---YILLSGM-----------------PPFWGKTKSKIFDAV----RAADLRFPSDPWDH 268
IL G P F K + + + V + A L FP D
Sbjct: 257 VRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDS 316
Query: 269 I-----------SASARDLIMGMLRVDPSTRLTAAEVLAHS----WMEECEQVAQKP 310
+ ++ ARDL+ ML +DP+ R++ + L H W + E A P
Sbjct: 317 LFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPP 373
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 146/358 (40%), Gaps = 81/358 (22%)
Query: 9 SSQLSTQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVL 68
S++ QF S +V T T+L RY K +G G G++ D +
Sbjct: 3 KSKVDNQFY-SVEVGDSTFTVLK---------RYQNLKPIGSGAQGIVCAAYDAVLDRNV 52
Query: 69 ACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVY------EEEDYVHLLMEL 122
A K +++ R+ + E+ +M K H N++ L V+ EE V+L+MEL
Sbjct: 53 AIKKLSRPFQNQTHAKRAYR-ELVLM-KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 123 CAGG-------ELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLA 175
EL H Y + ++ + + H G++HRDLKP NI++
Sbjct: 111 MDANLCQVIQMELDHERMSY----------LLYQMLCGIKHLHSAGIIHRDLKPSNIVV- 159
Query: 176 TKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAG-GYNQAADVWSAGVIL-- 232
S +K+ DFGLA + V + +Y APEV+ G GY + D+WS G I+
Sbjct: 160 --KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 233 ----YILLSGM-----------------PPFWGKTKSKIFDAV----RAADLRFPSDPWD 267
IL G P F K + + + V + A L FP D
Sbjct: 218 MVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPD 277
Query: 268 HI-----------SASARDLIMGMLRVDPSTRLTAAEVLAHS----WMEECEQVAQKP 310
+ ++ ARDL+ ML +DP+ R++ + L H W + E A P
Sbjct: 278 SLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPP 335
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 139/316 (43%), Gaps = 52/316 (16%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
I + +RY +G G +G + D TG +A K +++ + R+ + E+ ++
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 75
Query: 95 TKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ H NV+ L V+ EE + V+L+ L G +L + + K + ++ + +
Sbjct: 76 KHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIY 132
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
+++ + Y H ++HRDLKP N+ + + +K+ D+GLA + + G V + +
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDYGLARH--TDDEMTGYVATRW 187
Query: 209 YIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
Y APE++ YNQ D+WS G I+ LL+G F G + LR P
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI----LRLVGTPG 243
Query: 267 DHI-----SASAR--------------------------DLIMGMLRVDPSTRLTAAEVL 295
+ S SAR DL+ ML +D R+TAA+ L
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 296 AHSWMEECEQVAQKPC 311
AH++ + +P
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 146/358 (40%), Gaps = 81/358 (22%)
Query: 9 SSQLSTQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVL 68
S++ QF S +V T T+L RY K +G G G++ D +
Sbjct: 3 KSKVDNQFY-SVEVGDSTFTVLK---------RYQNLKPIGSGAQGIVCAAYDAVLDRNV 52
Query: 69 ACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVY------EEEDYVHLLMEL 122
A K +++ R+ + E+ +M K H N++ L V+ EE V+L+MEL
Sbjct: 53 AIKKLSRPFQNQTHAKRAYR-ELVLM-KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 123 CAGG-------ELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLA 175
EL H Y + ++ + + H G++HRDLKP NI++
Sbjct: 111 MDANLCQVIQMELDHERMSY----------LLYQMLCGIKHLHSAGIIHRDLKPSNIVV- 159
Query: 176 TKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAG-GYNQAADVWSAGVIL-- 232
S +K+ DFGLA + V + +Y APEV+ G GY + D+WS G I+
Sbjct: 160 --KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 233 ----YILLSGM-----------------PPFWGKTKSKIFDAV----RAADLRFPSDPWD 267
IL G P F K + + + V + A L FP D
Sbjct: 218 MVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPD 277
Query: 268 HI-----------SASARDLIMGMLRVDPSTRLTAAEVLAHS----WMEECEQVAQKP 310
+ ++ ARDL+ ML +DP+ R++ + L H W + E A P
Sbjct: 278 SLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPP 335
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 146/358 (40%), Gaps = 81/358 (22%)
Query: 9 SSQLSTQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVL 68
S++ QF S +V T T+L RY K +G G G++ D +
Sbjct: 4 KSKVDNQFY-SVEVGDSTFTVLK---------RYQNLKPIGSGAQGIVCAAYDAVLDRNV 53
Query: 69 ACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVY------EEEDYVHLLMEL 122
A K +++ R+ + E+ +M K H N++ L V+ EE V+L+MEL
Sbjct: 54 AIKKLSRPFQNQTHAKRAYR-ELVLM-KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 111
Query: 123 CAGG-------ELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLA 175
EL H Y + ++ + + H G++HRDLKP NI++
Sbjct: 112 MDANLCQVIQMELDHERMSY----------LLYQMLCGIKHLHSAGIIHRDLKPSNIVV- 160
Query: 176 TKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAG-GYNQAADVWSAGVIL-- 232
S +K+ DFGLA + V + +Y APEV+ G GY + D+WS G I+
Sbjct: 161 --KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 218
Query: 233 ----YILLSGM-----------------PPFWGKTKSKIFDAV----RAADLRFPSDPWD 267
IL G P F K + + + V + A L FP D
Sbjct: 219 MVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPD 278
Query: 268 HI-----------SASARDLIMGMLRVDPSTRLTAAEVLAHS----WMEECEQVAQKP 310
+ ++ ARDL+ ML +DP+ R++ + L H W + E A P
Sbjct: 279 SLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPP 336
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 138/296 (46%), Gaps = 46/296 (15%)
Query: 37 NLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTK 96
+L + V K LG+G G + F G +A K + L+ D+ +EI+++T+
Sbjct: 12 SLKNLVVSEKILGYGSSGTV-VFQGSFQGRPVAVKRM----LIDFCDI--ALMEIKLLTE 64
Query: 97 LSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARV--------IFR 148
HPNV+ + ++++ +ELC L + S+ ++ + R
Sbjct: 65 SDDHPNVIRYYCSETTDRFLYIALELCNLN--LQDLVESKNVSDENLKLQKEYNPISLLR 122
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSP----------IKLADFGLATYIKAGQ 198
+ V++ H ++HRDLKP+NIL++T S + I ++DFGL + +GQ
Sbjct: 123 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 182
Query: 199 -----NLHGTVGSPFYIAPEVLAGGYN--------QAADVWSAGVILYILLS-GMPPFWG 244
NL+ G+ + APE+L N ++ D++S G + Y +LS G PF
Sbjct: 183 SSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD 242
Query: 245 K--TKSKIFDAVRAAD-LRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAH 297
K +S I + + D ++ D + A A DLI M+ DP R TA +VL H
Sbjct: 243 KYSRESNIIRGIFSLDEMKCLHD--RSLIAEATDLISQMIDHDPLKRPTAMKVLRH 296
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 141/338 (41%), Gaps = 75/338 (22%)
Query: 41 RYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH 100
RY K +G G G++ D +A K +++ R+ + E+ +M K+ H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLM-KVVNH 82
Query: 101 PNVVDLKAVY------EEEDYVHLLMELCAGG-------ELFHRLEKYGRFSETEARVIF 147
N++ L V+ EE V+++MEL EL H Y +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY----------LL 132
Query: 148 RHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSP 207
++ + + H G++HRDLKP NI++ S + +K+ DFGLA + V +
Sbjct: 133 YQMLVGIKHLHSAGIIHRDLKPSNIVV---KSDATLKILDFGLARTAGTSFMMTPYVVTR 189
Query: 208 FYIAPEVLAG-GYNQAADVWSAGVILYILLSGMPPF--------WGKT-----------K 247
+Y APEV+ G GY + D+WS G I+ ++ G F W K
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM 249
Query: 248 SKIFDAVRA-----------------ADLRFPSDP-WDHISAS-ARDLIMGMLRVDPSTR 288
K+ VR D+ FP+D + + AS ARDL+ ML +D S R
Sbjct: 250 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 309
Query: 289 LTAAEVLAHS----WMEECEQVAQKPCKQDDLCCKQLE 322
++ E L H W + E A P D KQL+
Sbjct: 310 ISVDEALQHPYINVWYDPSEAEAPPPKIPD----KQLD 343
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 146/358 (40%), Gaps = 81/358 (22%)
Query: 9 SSQLSTQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVL 68
S++ QF S +V T T+L RY K +G G G++ D +
Sbjct: 2 KSKVDNQFY-SVEVGDSTFTVLK---------RYQNLKPIGSGAQGIVCAAYDAVLDRNV 51
Query: 69 ACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVY------EEEDYVHLLMEL 122
A K +++ R+ + E+ +M K H N++ L V+ EE V+L+MEL
Sbjct: 52 AIKKLSRPFQNQTHAKRAYR-ELVLM-KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 109
Query: 123 CAGG-------ELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLA 175
EL H Y + ++ + + H G++HRDLKP NI++
Sbjct: 110 MDANLCQVIQMELDHERMSY----------LLYQMLCGIKHLHSAGIIHRDLKPSNIVV- 158
Query: 176 TKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAG-GYNQAADVWSAGVIL-- 232
S +K+ DFGLA + V + +Y APEV+ G GY + D+WS G I+
Sbjct: 159 --KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 216
Query: 233 ----YILLSGM-----------------PPFWGKTKSKIFDAV----RAADLRFPSDPWD 267
IL G P F K + + + V + A L FP D
Sbjct: 217 MVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPD 276
Query: 268 HI-----------SASARDLIMGMLRVDPSTRLTAAEVLAHS----WMEECEQVAQKP 310
+ ++ ARDL+ ML +DP+ R++ + L H W + E A P
Sbjct: 277 SLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPP 334
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 138/296 (46%), Gaps = 46/296 (15%)
Query: 37 NLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTK 96
+L + V K LG+G G + F G +A K + L+ D+ +EI+++T+
Sbjct: 12 SLKNLVVSEKILGYGSSGTV-VFQGSFQGRPVAVKRM----LIDFCDI--ALMEIKLLTE 64
Query: 97 LSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARV--------IFR 148
HPNV+ + ++++ +ELC L + S+ ++ + R
Sbjct: 65 SDDHPNVIRYYCSETTDRFLYIALELCNLN--LQDLVESKNVSDENLKLQKEYNPISLLR 122
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSP----------IKLADFGLATYIKAGQ 198
+ V++ H ++HRDLKP+NIL++T S + I ++DFGL + +GQ
Sbjct: 123 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 182
Query: 199 -----NLHGTVGSPFYIAPEVLAGGYN--------QAADVWSAGVILYILLS-GMPPFWG 244
NL+ G+ + APE+L N ++ D++S G + Y +LS G PF
Sbjct: 183 XXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD 242
Query: 245 K--TKSKIFDAVRAAD-LRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAH 297
K +S I + + D ++ D + A A DLI M+ DP R TA +VL H
Sbjct: 243 KYSRESNIIRGIFSLDEMKCLHD--RSLIAEATDLISQMIDHDPLKRPTAMKVLRH 296
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 143/343 (41%), Gaps = 77/343 (22%)
Query: 10 SQLSTQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLA 69
S++ QF S +V T T+L RY K +G G G++ D +A
Sbjct: 4 SKVDNQFY-SVEVGDSTFTVLK---------RYQNLKPIGSGAQGIVCAAYDAVLDRNVA 53
Query: 70 CKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVY------EEEDYVHLLMELC 123
K +++ R+ + E+ +M K H N++ L V+ EE V+L+MEL
Sbjct: 54 IKKLSRPFQNQTHAKRAYR-ELVLM-KXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 124 AGG-------ELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLAT 176
EL H Y + ++ + + H G++HRDLKP NI++
Sbjct: 112 DANLCQVIQMELDHERMSY----------LLYQMLCGIKHLHSAGIIHRDLKPSNIVV-- 159
Query: 177 KSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAG-GYNQAADVWSAGVIL--- 232
S +K+ DFGLA + V + +Y APEV+ G GY + D+WS G I+
Sbjct: 160 -KSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Query: 233 ---YILLSGM-----------------PPFWGKTKSKIFDAV----RAADLRFPSDPWDH 268
IL G P F K + + + V + A L FP D
Sbjct: 219 VRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDS 278
Query: 269 I-----------SASARDLIMGMLRVDPSTRLTAAEVLAHSWM 300
+ ++ ARDL+ ML +DP+ R++ + L H ++
Sbjct: 279 LFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 143/343 (41%), Gaps = 77/343 (22%)
Query: 10 SQLSTQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLA 69
S++ QF S +V T T+L RY K +G G G++ D +A
Sbjct: 4 SKVDNQFY-SVEVGDSTFTVLK---------RYQNLKPIGSGAQGIVCAAYDAVLDRNVA 53
Query: 70 CKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVY------EEEDYVHLLMELC 123
K +++ R+ + E+ +M K H N++ L V+ EE V+L+MEL
Sbjct: 54 IKKLSRPFQNQTHAKRAYR-ELVLM-KXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 124 AGG-------ELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLAT 176
EL H Y + ++ + + H G++HRDLKP NI++
Sbjct: 112 DANLXQVIQMELDHERMSY----------LLYQMLCGIKHLHSAGIIHRDLKPSNIVV-- 159
Query: 177 KSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAG-GYNQAADVWSAGVIL--- 232
S +K+ DFGLA + V + +Y APEV+ G GY + D+WS G I+
Sbjct: 160 -KSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Query: 233 ---YILLSGM-----------------PPFWGKTKSKIFDAV----RAADLRFPSDPWDH 268
IL G P F K + + + V + A L FP D
Sbjct: 219 VRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDS 278
Query: 269 I-----------SASARDLIMGMLRVDPSTRLTAAEVLAHSWM 300
+ ++ ARDL+ ML +DP+ R++ + L H ++
Sbjct: 279 LFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 129/268 (48%), Gaps = 22/268 (8%)
Query: 40 DRYVLGKQLGWGQFGVIRE---CSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTK 96
+R LG+ +G GQFG + + S + +A K+ T + VR L+ + +
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN---CTSDSVREKFLQEALTMR 66
Query: 97 LSGHPNVVDLKAVYEEEDYVHLLMELCAGGEL--FHRLEKYGRFSETEARVIFRH-LMQV 153
HP++V L V E + V ++MELC GEL F ++ KY + + +++ + L
Sbjct: 67 QFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYS--LDLASLILYAYQLSTA 123
Query: 154 VSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGS-PF-YIA 211
++Y VHRD+ N+L+ SS+ +KL DFGL+ Y++ + G P ++A
Sbjct: 124 LAYLESKRFVHRDIAARNVLV---SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMA 180
Query: 212 PEVLA-GGYNQAADVWSAGVILY-ILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHI 269
PE + + A+DVW GV ++ IL+ G+ PF G + + + + R P P +
Sbjct: 181 PESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLPMPP--NC 237
Query: 270 SASARDLIMGMLRVDPSTRLTAAEVLAH 297
+ L+ DPS R E+ A
Sbjct: 238 PPTLYSLMTKCWAYDPSRRPRFTELKAQ 265
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 137/292 (46%), Gaps = 42/292 (14%)
Query: 37 NLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTK 96
+L + V K LG+G G + F G +A K + L+ D+ +EI+++T+
Sbjct: 30 SLKNLVVSEKILGYGSSGTV-VFQGSFQGRPVAVKRM----LIDFCDI--ALMEIKLLTE 82
Query: 97 LSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARV--------IFR 148
HPNV+ + ++++ +ELC L + S+ ++ + R
Sbjct: 83 SDDHPNVIRYYCSETTDRFLYIALELCNLN--LQDLVESKNVSDENLKLQKEYNPISLLR 140
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSP----------IKLADFGLATYIKAGQ 198
+ V++ H ++HRDLKP+NIL++T S + I ++DFGL + +GQ
Sbjct: 141 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 200
Query: 199 -----NLHGTVGSPFYIAPEVLAGG----YNQAADVWSAGVILYILLS-GMPPFWGK--T 246
NL+ G+ + APE+L ++ D++S G + Y +LS G PF K
Sbjct: 201 XXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR 260
Query: 247 KSKIFDAVRAAD-LRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAH 297
+S I + + D ++ D + A A DLI M+ DP R TA +VL H
Sbjct: 261 ESNIIRGIFSLDEMKCLHD--RSLIAEATDLISQMIDHDPLKRPTAMKVLRH 310
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 126/267 (47%), Gaps = 20/267 (7%)
Query: 40 DRYVLGKQLGWGQFGVIRE---CSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTK 96
+R LG+ +G GQFG + + S + +A K+ T + VR L+ + +
Sbjct: 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN---CTSDSVREKFLQEALTMR 446
Query: 97 LSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR--HLMQVV 154
HP++V L V E + V ++MELC GEL L+ +FS A +I L +
Sbjct: 447 QFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQ-VRKFSLDLASLILYAYQLSTAL 504
Query: 155 SYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGS-PF-YIAP 212
+Y VHRD+ N+L+ SS+ +KL DFGL+ Y++ + G P ++AP
Sbjct: 505 AYLESKRFVHRDIAARNVLV---SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 561
Query: 213 EVLA-GGYNQAADVWSAGVILY-ILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHIS 270
E + + A+DVW GV ++ IL+ G+ PF G + + + + R P P +
Sbjct: 562 ESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLPMPP--NCP 618
Query: 271 ASARDLIMGMLRVDPSTRLTAAEVLAH 297
+ L+ DPS R E+ A
Sbjct: 619 PTLYSLMTKCWAYDPSRRPRFTELKAQ 645
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 138/316 (43%), Gaps = 52/316 (16%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
I + +RY +G G +G + D TG +A K +++ + R+ + E+ ++
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLL 75
Query: 95 TKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ H NV+ L V+ EE + V+L+ L G +L + + K + ++ + +
Sbjct: 76 KHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIY 132
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
+++ + Y H ++HRDLKP N+ + + +K+ DF LA + + G V + +
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFYLARH--TDDEMTGYVATRW 187
Query: 209 YIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
Y APE++ YNQ D+WS G I+ LL+G F G + LR P
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI----LRLVGTPG 243
Query: 267 DHI-----SASAR--------------------------DLIMGMLRVDPSTRLTAAEVL 295
+ S SAR DL+ ML +D R+TAA+ L
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 296 AHSWMEECEQVAQKPC 311
AH++ + +P
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 137/292 (46%), Gaps = 42/292 (14%)
Query: 37 NLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTK 96
+L + V K LG+G G + F G +A K + L+ D+ +EI+++T+
Sbjct: 30 SLKNLVVSEKILGYGSSGTV-VFQGSFQGRPVAVKRM----LIDFCDI--ALMEIKLLTE 82
Query: 97 LSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARV--------IFR 148
HPNV+ + ++++ +ELC L + S+ ++ + R
Sbjct: 83 SDDHPNVIRYYCSETTDRFLYIALELCNLN--LQDLVESKNVSDENLKLQKEYNPISLLR 140
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSP----------IKLADFGLATYIKAGQ 198
+ V++ H ++HRDLKP+NIL++T S + I ++DFGL + +GQ
Sbjct: 141 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 200
Query: 199 -----NLHGTVGSPFYIAPEVLAGG----YNQAADVWSAGVILYILLS-GMPPFWGK--T 246
NL+ G+ + APE+L ++ D++S G + Y +LS G PF K
Sbjct: 201 XXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR 260
Query: 247 KSKIFDAVRAAD-LRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAH 297
+S I + + D ++ D + A A DLI M+ DP R TA +VL H
Sbjct: 261 ESNIIRGIFSLDEMKCLHD--RSLIAEATDLISQMIDHDPLKRPTAMKVLRH 310
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 126/265 (47%), Gaps = 16/265 (6%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
+R LG+ +G GQFG + + +I + T + VR L+ + +
Sbjct: 13 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 72
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGEL--FHRLEKYGRFSETEARVIFRH-LMQVVSY 156
HP++V L V E + V ++MELC GEL F ++ KY + + +++ + L ++Y
Sbjct: 73 HPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSL--DLASLILYAYQLSTALAY 129
Query: 157 CHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGS-PF-YIAPEV 214
VHRD+ N+L+ SS+ +KL DFGL+ Y++ + G P ++APE
Sbjct: 130 LESKRFVHRDIAARNVLV---SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 186
Query: 215 LA-GGYNQAADVWSAGVILY-ILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISAS 272
+ + A+DVW GV ++ IL+ G+ PF G + + + + R P P + +
Sbjct: 187 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLPMPP--NCPPT 243
Query: 273 ARDLIMGMLRVDPSTRLTAAEVLAH 297
L+ DPS R E+ A
Sbjct: 244 LYSLMTKCWAYDPSRRPRFTELKAQ 268
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 141/338 (41%), Gaps = 75/338 (22%)
Query: 41 RYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH 100
RY K +G G G++ D +A K +++ R+ + E+ +M K+ H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLM-KVVNH 82
Query: 101 PNVVDLKAVY------EEEDYVHLLMELCAGG-------ELFHRLEKYGRFSETEARVIF 147
N++ L V+ EE V+++MEL EL H Y +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY----------LL 132
Query: 148 RHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSP 207
++ + + H G++HRDLKP NI++ S + +K+ DFGLA + V +
Sbjct: 133 YQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDATLKILDFGLARTAGTSFMMTPYVVTR 189
Query: 208 FYIAPEVLAG-GYNQAADVWSAGVILYILLSGMPPF--------WGKT-----------K 247
+Y APEV+ G GY + D+WS G I+ ++ G F W K
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM 249
Query: 248 SKIFDAVRA-----------------ADLRFPSDP-WDHISAS-ARDLIMGMLRVDPSTR 288
K+ VR D+ FP+D + + AS ARDL+ ML +D S R
Sbjct: 250 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 309
Query: 289 LTAAEVLAHS----WMEECEQVAQKPCKQDDLCCKQLE 322
++ E L H W + E A P D KQL+
Sbjct: 310 ISVDEALQHPYINVWYDPSEAEAPPPKIPD----KQLD 343
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 126/265 (47%), Gaps = 16/265 (6%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
+R LG+ +G GQFG + + +I + T + VR L+ + +
Sbjct: 12 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 71
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGEL--FHRLEKYGRFSETEARVIFRH-LMQVVSY 156
HP++V L V E + V ++MELC GEL F ++ KY + + +++ + L ++Y
Sbjct: 72 HPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYS--LDLASLILYAYQLSTALAY 128
Query: 157 CHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGS-PF-YIAPEV 214
VHRD+ N+L+ SS+ +KL DFGL+ Y++ + G P ++APE
Sbjct: 129 LESKRFVHRDIAARNVLV---SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 185
Query: 215 LA-GGYNQAADVWSAGVILY-ILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISAS 272
+ + A+DVW GV ++ IL+ G+ PF G + + + + R P P + +
Sbjct: 186 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLPMPP--NCPPT 242
Query: 273 ARDLIMGMLRVDPSTRLTAAEVLAH 297
L+ DPS R E+ A
Sbjct: 243 LYSLMTKCWAYDPSRRPRFTELKAQ 267
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 125/265 (47%), Gaps = 16/265 (6%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
+R LG+ +G GQFG + + +I + T + VR L+ + +
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 69
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGEL--FHRLEKYGRFSETEARVIFRH-LMQVVSY 156
HP++V L V E V ++MELC GEL F ++ KY + + +++ + L ++Y
Sbjct: 70 HPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYS--LDLASLILYAYQLSTALAY 126
Query: 157 CHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGS-PF-YIAPEV 214
VHRD+ N+L+ SS+ +KL DFGL+ Y++ + G P ++APE
Sbjct: 127 LESKRFVHRDIAARNVLV---SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 183
Query: 215 LA-GGYNQAADVWSAGVILY-ILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISAS 272
+ + A+DVW GV ++ IL+ G+ PF G + + + + R P P + +
Sbjct: 184 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLPMPP--NCPPT 240
Query: 273 ARDLIMGMLRVDPSTRLTAAEVLAH 297
L+ DPS R E+ A
Sbjct: 241 LYSLMTKCWAYDPSRRPRFTELKAQ 265
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 134/326 (41%), Gaps = 71/326 (21%)
Query: 41 RYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH 100
RY K +G G G++ D +A K +++ R+ + E+ +M K H
Sbjct: 19 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLM-KCVNH 76
Query: 101 PNVVDLKAVY------EEEDYVHLLMELCAGG-------ELFHRLEKYGRFSETEARVIF 147
N++ L V+ EE V+L+MEL EL H Y +
Sbjct: 77 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY----------LL 126
Query: 148 RHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSP 207
++ + + H G++HRDLKP NI++ S +K+ DFGLA + V +
Sbjct: 127 YQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTR 183
Query: 208 FYIAPEVLAG-GYNQAADVWSAGVIL------YILLSGM-----------------PPFW 243
+Y APEV+ G GY + D+WS G I+ IL G P F
Sbjct: 184 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFM 243
Query: 244 GKTKSKIFDAV----RAADLRFPSDPWDHI-----------SASARDLIMGMLRVDPSTR 288
K + + + V + A L FP D + ++ ARDL+ ML +DP+ R
Sbjct: 244 KKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKR 303
Query: 289 LTAAEVLAHS----WMEECEQVAQKP 310
++ + L H W + E A P
Sbjct: 304 ISVDDALQHPYINVWYDPAEVEAPPP 329
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 125/265 (47%), Gaps = 16/265 (6%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
+R LG+ +G GQFG + + +I + T + VR L+ + +
Sbjct: 38 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 97
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGEL--FHRLEKYGRFSETEARVIFRH-LMQVVSY 156
HP++V L V E V ++MELC GEL F ++ KY + + +++ + L ++Y
Sbjct: 98 HPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSL--DLASLILYAYQLSTALAY 154
Query: 157 CHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGS-PF-YIAPEV 214
VHRD+ N+L+ SS+ +KL DFGL+ Y++ + G P ++APE
Sbjct: 155 LESKRFVHRDIAARNVLV---SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 211
Query: 215 LA-GGYNQAADVWSAGVILY-ILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISAS 272
+ + A+DVW GV ++ IL+ G+ PF G + + + + R P P + +
Sbjct: 212 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLPMPP--NCPPT 268
Query: 273 ARDLIMGMLRVDPSTRLTAAEVLAH 297
L+ DPS R E+ A
Sbjct: 269 LYSLMTKCWAYDPSRRPRFTELKAQ 293
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 134/326 (41%), Gaps = 71/326 (21%)
Query: 41 RYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH 100
RY K +G G G++ D +A K +++ R+ + E+ +M K H
Sbjct: 18 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLM-KCVNH 75
Query: 101 PNVVDLKAVY------EEEDYVHLLMELCAGG-------ELFHRLEKYGRFSETEARVIF 147
N++ L V+ EE V+L+MEL EL H Y +
Sbjct: 76 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY----------LL 125
Query: 148 RHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSP 207
++ + + H G++HRDLKP NI++ S +K+ DFGLA + V +
Sbjct: 126 YQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTR 182
Query: 208 FYIAPEVLAG-GYNQAADVWSAGVIL------YILLSGM-----------------PPFW 243
+Y APEV+ G GY + D+WS G I+ IL G P F
Sbjct: 183 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFM 242
Query: 244 GKTKSKIFDAV----RAADLRFPSDPWDHI-----------SASARDLIMGMLRVDPSTR 288
K + + + V + A L FP D + ++ ARDL+ ML +DP+ R
Sbjct: 243 KKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKR 302
Query: 289 LTAAEVLAHS----WMEECEQVAQKP 310
++ + L H W + E A P
Sbjct: 303 ISVDDALQHPYINVWYDPAEVEAPPP 328
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 134/326 (41%), Gaps = 71/326 (21%)
Query: 41 RYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH 100
RY K +G G G++ D +A K +++ R+ + E+ +M K H
Sbjct: 19 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLM-KCVNH 76
Query: 101 PNVVDLKAVY------EEEDYVHLLMELCAGG-------ELFHRLEKYGRFSETEARVIF 147
N++ L V+ EE V+L+MEL EL H Y +
Sbjct: 77 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY----------LL 126
Query: 148 RHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSP 207
++ + + H G++HRDLKP NI++ S +K+ DFGLA + V +
Sbjct: 127 YQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTR 183
Query: 208 FYIAPEVLAG-GYNQAADVWSAGVIL------YILLSGM-----------------PPFW 243
+Y APEV+ G GY + D+WS G I+ IL G P F
Sbjct: 184 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFM 243
Query: 244 GKTKSKIFDAV----RAADLRFPSDPWDHI-----------SASARDLIMGMLRVDPSTR 288
K + + + V + A L FP D + ++ ARDL+ ML +DP+ R
Sbjct: 244 KKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKR 303
Query: 289 LTAAEVLAHS----WMEECEQVAQKP 310
++ + L H W + E A P
Sbjct: 304 ISVDDALQHPYINVWYDPAEVEAPPP 329
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 126/265 (47%), Gaps = 16/265 (6%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
+R LG+ +G GQFG + + +I + T + VR L+ + +
Sbjct: 7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 66
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGEL--FHRLEKYGRFSETEARVIFRH-LMQVVSY 156
HP++V L V E + V ++MELC GEL F ++ KY + + +++ + L ++Y
Sbjct: 67 HPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYS--LDLASLILYAYQLSTALAY 123
Query: 157 CHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGS-PF-YIAPEV 214
VHRD+ N+L+ SS+ +KL DFGL+ Y++ + G P ++APE
Sbjct: 124 LESKRFVHRDIAARNVLV---SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 180
Query: 215 LA-GGYNQAADVWSAGVILY-ILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISAS 272
+ + A+DVW GV ++ IL+ G+ PF G + + + + R P P + +
Sbjct: 181 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLPMPP--NCPPT 237
Query: 273 ARDLIMGMLRVDPSTRLTAAEVLAH 297
L+ DPS R E+ A
Sbjct: 238 LYSLMTKCWAYDPSRRPRFTELKAQ 262
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 126/267 (47%), Gaps = 20/267 (7%)
Query: 40 DRYVLGKQLGWGQFGVIRE---CSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTK 96
+R LG+ +G GQFG + + S + +A K+ T + VR L+ + +
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN---CTSDSVREKFLQEALTMR 66
Query: 97 LSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR--HLMQVV 154
HP++V L V E + V ++MELC GEL L+ +FS A +I L +
Sbjct: 67 QFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQ-VRKFSLDLASLILYAYQLSTAL 124
Query: 155 SYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGS-PF-YIAP 212
+Y VHRD+ N+L+ S++ +KL DFGL+ Y++ + G P ++AP
Sbjct: 125 AYLESKRFVHRDIAARNVLV---SATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 181
Query: 213 EVLA-GGYNQAADVWSAGVILY-ILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHIS 270
E + + A+DVW GV ++ IL+ G+ PF G + + + + R P P +
Sbjct: 182 ESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLPMPP--NCP 238
Query: 271 ASARDLIMGMLRVDPSTRLTAAEVLAH 297
+ L+ DPS R E+ A
Sbjct: 239 PTLYSLMTKCWAYDPSRRPRFTELKAQ 265
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 134/326 (41%), Gaps = 71/326 (21%)
Query: 41 RYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH 100
RY K +G G G++ D +A K +++ R+ + E+ +M K H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLM-KCVNH 82
Query: 101 PNVVDLKAVY------EEEDYVHLLMELCAGG-------ELFHRLEKYGRFSETEARVIF 147
N++ L V+ EE V+++MEL EL H Y +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY----------LL 132
Query: 148 RHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSP 207
++ + + H G++HRDLKP NI++ S +K+ DFGLA + V +
Sbjct: 133 YQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMEPEVVTR 189
Query: 208 FYIAPEVLAG-GYNQAADVWSAGVIL------YILLSGM-----------------PPFW 243
+Y APEV+ G GY + D+WS G I+ IL G P F
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFM 249
Query: 244 GKTKSKIFDAVRA-------------ADLRFPSDP-WDHISAS-ARDLIMGMLRVDPSTR 288
K + + + V D+ FP+D + + AS ARDL+ ML +D S R
Sbjct: 250 KKLQPTVRNYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 309
Query: 289 LTAAEVLAHS----WMEECEQVAQKP 310
++ E L H W + E A P
Sbjct: 310 ISVDEALQHPYINVWYDPSEAEAPPP 335
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 126/265 (47%), Gaps = 16/265 (6%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
+R LG+ +G GQFG + + +I + T + VR L+ + +
Sbjct: 15 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 74
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGEL--FHRLEKYGRFSETEARVIFRH-LMQVVSY 156
HP++V L V E + V ++MELC GEL F ++ KY + + +++ + L ++Y
Sbjct: 75 HPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSL--DLASLILYAYQLSTALAY 131
Query: 157 CHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGS-PF-YIAPEV 214
VHRD+ N+L+ SS+ +KL DFGL+ Y++ + G P ++APE
Sbjct: 132 LESKRFVHRDIAARNVLV---SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 188
Query: 215 LA-GGYNQAADVWSAGVILY-ILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISAS 272
+ + A+DVW GV ++ IL+ G+ PF G + + + + R P P + +
Sbjct: 189 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLPMPP--NCPPT 245
Query: 273 ARDLIMGMLRVDPSTRLTAAEVLAH 297
L+ DPS R E+ A
Sbjct: 246 LYSLMTKCWAYDPSRRPRFTELKAQ 270
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 145/327 (44%), Gaps = 47/327 (14%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
I + +RY +G G +G + D +G +A K +++ + R+ + E+ ++
Sbjct: 46 IWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYR-ELRLL 104
Query: 95 TKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ H NV+ L V+ EE + V+L+ L G +L + + K + ++ + +
Sbjct: 105 KHMK-HENVIGLLDVFTPATSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIY 161
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
+++ + Y H ++HRDLKP N+ + + +K+ DFGLA + + G V + +
Sbjct: 162 QILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARH--TDDEMTGYVATRW 216
Query: 209 YIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPF---------------WGKTKSKIF 251
Y APE++ YN D+WS G I+ LL+G F G + +
Sbjct: 217 YRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVI 276
Query: 252 DAVRAADLR-----FPSDPWDHIS-------ASARDLIMGMLRVDPSTRLTAAEVLAHSW 299
+ + + R P P + + A DL+ ML +D R+TA+E LAH +
Sbjct: 277 SRMPSHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPY 336
Query: 300 MEECEQVAQKPCKQ---DDLCCKQLEV 323
+ +P + +QLE+
Sbjct: 337 FSQYHDPDDEPESEPYDQSFESRQLEI 363
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 130/299 (43%), Gaps = 40/299 (13%)
Query: 48 LGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLK 107
+G G +G + D TG +A K + + + R+ + E+ ++ + H NV+ L
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYR-ELRLLKHMR-HENVIGLL 90
Query: 108 AVYEEE----DYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVV 163
V+ + D+ + + G +L K+ + E + + +++ + Y H G++
Sbjct: 91 DVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGII 150
Query: 164 HRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAG--GYNQ 221
HRDLKP N+ + + +K+ DFGLA +A + G V + +Y APEV+ Y Q
Sbjct: 151 HRDLKPGNLAV---NEDCELKILDFGLAR--QADSEMXGXVVTRWYRAPEVILNWMRYTQ 205
Query: 222 AADVWSAGVILYILLSGMPPFWG-------KTKSKIFDAVRAADL-RFPSDP-------- 265
D+WS G I+ +++G F G K K+ A + R SD
Sbjct: 206 TVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGL 265
Query: 266 -----------WDHISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKPCKQ 313
+ S A +L+ ML +D R+TA E LAH + E +P Q
Sbjct: 266 PELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDTEDEPQVQ 324
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 126/267 (47%), Gaps = 20/267 (7%)
Query: 40 DRYVLGKQLGWGQFGVIRE---CSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTK 96
+R LG+ +G GQFG + + S + +A K+ T + VR L+ + +
Sbjct: 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN---CTSDSVREKFLQEALTMR 446
Query: 97 LSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR--HLMQVV 154
HP++V L V E + V ++MELC GEL L+ +FS A +I L +
Sbjct: 447 QFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQ-VRKFSLDLASLILYAYQLSTAL 504
Query: 155 SYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGS-PF-YIAP 212
+Y VHRD+ N+L+ S++ +KL DFGL+ Y++ + G P ++AP
Sbjct: 505 AYLESKRFVHRDIAARNVLV---SATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 561
Query: 213 EVLA-GGYNQAADVWSAGVILY-ILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHIS 270
E + + A+DVW GV ++ IL+ G+ PF G + + + + R P P +
Sbjct: 562 ESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLPMPP--NCP 618
Query: 271 ASARDLIMGMLRVDPSTRLTAAEVLAH 297
+ L+ DPS R E+ A
Sbjct: 619 PTLYSLMTKCWAYDPSRRPRFTELKAQ 645
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 138/316 (43%), Gaps = 52/316 (16%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
I + +RY +G G +G + D TG +A K +++ + R+ + E+ ++
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 75
Query: 95 TKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ H NV+ L V+ EE + V+L+ L G +L + + K + ++ + +
Sbjct: 76 KHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIY 132
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
+++ + Y H ++HRDLKP N+ + + +K+ FGLA + + G V + +
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILGFGLARH--TDDEMTGYVATRW 187
Query: 209 YIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
Y APE++ YNQ D+WS G I+ LL+G F G + LR P
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI----LRLVGTPG 243
Query: 267 DHI-----SASAR--------------------------DLIMGMLRVDPSTRLTAAEVL 295
+ S SAR DL+ ML +D R+TAA+ L
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 296 AHSWMEECEQVAQKPC 311
AH++ + +P
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 130/295 (44%), Gaps = 42/295 (14%)
Query: 42 YVLGKQLGWGQ----FGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKL 97
Y + KQ+G G F V+ E ++ A K + + + + S + EI + KL
Sbjct: 58 YSILKQIGSGGSSKVFQVLNE-----KKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKL 111
Query: 98 SGHPNVVDLKAVYEEED-YVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSY 156
H + + YE D Y++++ME C +L L+K E + ++++++ V
Sbjct: 112 QQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 170
Query: 157 CHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN---LHGTVGSPFYIAPE 213
H +G+VH DLKP N L+ +KL DFG+A ++ VG+ Y+ PE
Sbjct: 171 IHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 226
Query: 214 VLAG------------GYNQAADVWSAGVILYILLSGMPPFWG--KTKSKIFDAVRAA-D 258
+ + +DVWS G ILY + G PF SK+ + +
Sbjct: 227 AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHE 286
Query: 259 LRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKPCKQ 313
+ FP P +D++ L+ DP R++ E+LAH ++ Q+ P Q
Sbjct: 287 IEFPDIP----EKDLQDVLKCCLKRDPKQRISIPELLAHPYV----QIQTHPVNQ 333
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 130/295 (44%), Gaps = 42/295 (14%)
Query: 42 YVLGKQLGWGQ----FGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKL 97
Y + KQ+G G F V+ E ++ A K + + + + S + EI + KL
Sbjct: 30 YSILKQIGSGGSSKVFQVLNE-----KKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKL 83
Query: 98 SGHPNVVDLKAVYEEED-YVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSY 156
H + + YE D Y++++ME C +L L+K E + ++++++ V
Sbjct: 84 QQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 142
Query: 157 CHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNL---HGTVGSPFYIAPE 213
H +G+VH DLKP N L+ +KL DFG+A ++ VG+ Y+ PE
Sbjct: 143 IHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPE 198
Query: 214 VLAG------------GYNQAADVWSAGVILYILLSGMPPFWGKTK--SKIFDAVRAA-D 258
+ + +DVWS G ILY + G PF SK+ + +
Sbjct: 199 AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHE 258
Query: 259 LRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKPCKQ 313
+ FP P +D++ L+ DP R++ E+LAH ++ Q+ P Q
Sbjct: 259 IEFPDIP----EKDLQDVLKCCLKRDPKQRISIPELLAHPYV----QIQTHPVNQ 305
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 130/295 (44%), Gaps = 42/295 (14%)
Query: 42 YVLGKQLGWGQ----FGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKL 97
Y + KQ+G G F V+ E ++ A K + + + + S + EI + KL
Sbjct: 30 YSILKQIGSGGSSKVFQVLNE-----KKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKL 83
Query: 98 SGHPNVVDLKAVYEEED-YVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSY 156
H + + YE D Y++++ME C +L L+K E + ++++++ V
Sbjct: 84 QQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 142
Query: 157 CHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN---LHGTVGSPFYIAPE 213
H +G+VH DLKP N L+ +KL DFG+A ++ VG+ Y+ PE
Sbjct: 143 IHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 198
Query: 214 VLAG------------GYNQAADVWSAGVILYILLSGMPPFWGKTK--SKIFDAVRAA-D 258
+ + +DVWS G ILY + G PF SK+ + +
Sbjct: 199 AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHE 258
Query: 259 LRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKPCKQ 313
+ FP P +D++ L+ DP R++ E+LAH ++ Q+ P Q
Sbjct: 259 IEFPDIP----EKDLQDVLKCCLKRDPKQRISIPELLAHPYV----QIQTHPVNQ 305
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 130/295 (44%), Gaps = 42/295 (14%)
Query: 42 YVLGKQLGWGQ----FGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKL 97
Y + KQ+G G F V+ E ++ A K + + + + S + EI + KL
Sbjct: 11 YSILKQIGSGGSSKVFQVLNE-----KKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKL 64
Query: 98 SGHPNVVDLKAVYEEED-YVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSY 156
H + + YE D Y++++ME C +L L+K E + ++++++ V
Sbjct: 65 QQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 123
Query: 157 CHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN---LHGTVGSPFYIAPE 213
H +G+VH DLKP N L+ +KL DFG+A ++ VG+ Y+ PE
Sbjct: 124 IHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 179
Query: 214 VLAG------------GYNQAADVWSAGVILYILLSGMPPFWG--KTKSKIFDAVRAA-D 258
+ + +DVWS G ILY + G PF SK+ + +
Sbjct: 180 AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHE 239
Query: 259 LRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKPCKQ 313
+ FP P +D++ L+ DP R++ E+LAH ++ Q+ P Q
Sbjct: 240 IEFPDIP----EKDLQDVLKCCLKRDPKQRISIPELLAHPYV----QIQTHPVNQ 286
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 130/295 (44%), Gaps = 42/295 (14%)
Query: 42 YVLGKQLGWGQ----FGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKL 97
Y + KQ+G G F V+ E ++ A K + + + + S + EI + KL
Sbjct: 58 YSILKQIGSGGSSKVFQVLNE-----KKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKL 111
Query: 98 SGHPNVVDLKAVYEEED-YVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSY 156
H + + YE D Y++++ME C +L L+K E + ++++++ V
Sbjct: 112 QQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 170
Query: 157 CHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN---LHGTVGSPFYIAPE 213
H +G+VH DLKP N L+ +KL DFG+A ++ VG+ Y+ PE
Sbjct: 171 IHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 226
Query: 214 VLAG------------GYNQAADVWSAGVILYILLSGMPPFWG--KTKSKIFDAVRAA-D 258
+ + +DVWS G ILY + G PF SK+ + +
Sbjct: 227 AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHE 286
Query: 259 LRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKPCKQ 313
+ FP P +D++ L+ DP R++ E+LAH ++ Q+ P Q
Sbjct: 287 IEFPDIP----EKDLQDVLKCCLKRDPKQRISIPELLAHPYV----QIQTHPVNQ 333
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 140/338 (41%), Gaps = 75/338 (22%)
Query: 41 RYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH 100
RY K +G G G++ D +A K +++ R+ + E+ +M K H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLM-KCVNH 82
Query: 101 PNVVDLKAVY------EEEDYVHLLMELCAGG-------ELFHRLEKYGRFSETEARVIF 147
N++ L V+ EE V+++MEL EL H Y +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY----------LL 132
Query: 148 RHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSP 207
++ + + H G++HRDLKP NI++ S + +K+ DFGLA + V +
Sbjct: 133 YQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDATLKILDFGLARTAGTSFMMTPYVVTR 189
Query: 208 FYIAPEVLAG-GYNQAADVWSAGVILYILLSGMPPF--------WGKT-----------K 247
+Y APEV+ G GY + D+WS G I+ ++ G F W K
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM 249
Query: 248 SKIFDAVRA-----------------ADLRFPSDP-WDHISAS-ARDLIMGMLRVDPSTR 288
K+ VR D+ FP+D + + AS ARDL+ ML +D S R
Sbjct: 250 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 309
Query: 289 LTAAEVLAHS----WMEECEQVAQKPCKQDDLCCKQLE 322
++ E L H W + E A P D KQL+
Sbjct: 310 ISVDEALQHPYINVWYDPSEAEAPPPKIPD----KQLD 343
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 136/316 (43%), Gaps = 52/316 (16%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
I + +RY +G G +G + D TG +A K +++ + R+ + E+ ++
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 75
Query: 95 TKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ H NV+ L V+ EE + V+L+ L G + + K + ++ + +
Sbjct: 76 KHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIY 132
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
+++ + Y H ++HRDLKP N+ + + +K+ D GLA + + G V + +
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDAGLARH--TDDEMTGYVATRW 187
Query: 209 YIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
Y APE++ YNQ D+WS G I+ LL+G F G + LR P
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI----LRLVGTPG 243
Query: 267 DHI-----SASAR--------------------------DLIMGMLRVDPSTRLTAAEVL 295
+ S SAR DL+ ML +D R+TAA+ L
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 296 AHSWMEECEQVAQKPC 311
AH++ + +P
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 127/329 (38%), Gaps = 72/329 (21%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKL 97
LS RY + LG G FG + EC D G I K+ E RS EI+++ L
Sbjct: 12 LSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARS---EIQVLEHL 68
Query: 98 -SGHPN----VVDLKAVYEEEDYVHLLMELCAGGEL-FHRLEKYGRFSETEARVIFRHLM 151
+ PN V + +E ++ ++ EL F + + F R + +
Sbjct: 69 NTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQIC 128
Query: 152 QVVSYCHGNGVVHRDLKPENILLATKSSSSP----------------IKLADFGLATYIK 195
+ V++ H N + H DLKPENIL + IK+ DFG ATY
Sbjct: 129 KSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATY-- 186
Query: 196 AGQNLHGT-VGSPFYIAPEV-LAGGYNQAADVWSAGVIL--YIL-------------LSG 238
H T V + Y APEV LA G++Q DVWS G IL Y L L+
Sbjct: 187 -DDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAM 245
Query: 239 MPPFWGKTKSKIFDAVRAADLRFPSD--PWDHISASAR---------------------- 274
M G + R F D WD S++ R
Sbjct: 246 MERILGPLPKHMIQKTRKRKY-FHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHER 304
Query: 275 --DLIMGMLRVDPSTRLTAAEVLAHSWME 301
DLI ML DP+ R+T E L H + +
Sbjct: 305 LFDLIQKMLEYDPAKRITLREALKHPFFD 333
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 130/295 (44%), Gaps = 42/295 (14%)
Query: 42 YVLGKQLGWGQ----FGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKL 97
Y + KQ+G G F V+ E ++ A K + + + + S + EI + KL
Sbjct: 58 YSILKQIGSGGSSKVFQVLNE-----KKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKL 111
Query: 98 SGHPNVVDLKAVYEEED-YVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSY 156
H + + YE D Y++++ME C +L L+K E + ++++++ V
Sbjct: 112 QQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 170
Query: 157 CHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN---LHGTVGSPFYIAPE 213
H +G+VH DLKP N L+ +KL DFG+A ++ VG+ Y+ PE
Sbjct: 171 IHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPE 226
Query: 214 VLAG------------GYNQAADVWSAGVILYILLSGMPPFWG--KTKSKIFDAVRAA-D 258
+ + +DVWS G ILY + G PF SK+ + +
Sbjct: 227 AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHE 286
Query: 259 LRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKPCKQ 313
+ FP P +D++ L+ DP R++ E+LAH ++ Q+ P Q
Sbjct: 287 IEFPDIP----EKDLQDVLKCCLKRDPKQRISIPELLAHPYV----QIQTHPVNQ 333
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 138/316 (43%), Gaps = 52/316 (16%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
I + +RY +G G +G + D TG +A K +++ + R+ + E+ ++
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 75
Query: 95 TKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ H NV+ L V+ EE + V+L+ L G +L + + K + ++ + +
Sbjct: 76 KHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIY 132
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
+++ + Y H ++HRDLKP N+ + + +K+ D GLA + + G V + +
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDRGLARH--TDDEMTGYVATRW 187
Query: 209 YIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
Y APE++ YNQ D+WS G I+ LL+G F G + LR P
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI----LRLVGTPG 243
Query: 267 DHI-----SASAR--------------------------DLIMGMLRVDPSTRLTAAEVL 295
+ S SAR DL+ ML +D R+TAA+ L
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 296 AHSWMEECEQVAQKPC 311
AH++ + +P
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 111/247 (44%), Gaps = 32/247 (12%)
Query: 86 SIKLEIEIMTKLSGHPNVVDLKAVYEEED-YVHLLMELCAGGELFHRLEKYGRFSETEAR 144
S + EI + KL H + + YE D Y++++ME C +L L+K E +
Sbjct: 52 SYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERK 110
Query: 145 VIFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN---LH 201
++++++ V H +G+VH DLKP N L+ +KL DFG+A ++
Sbjct: 111 SYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKD 166
Query: 202 GTVGSPFYIAPEVLAG------------GYNQAADVWSAGVILYILLSGMPPFWGKTK-- 247
VG+ Y+ PE + + +DVWS G ILY + G PF
Sbjct: 167 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 226
Query: 248 SKIFDAVRAA-DLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQV 306
SK+ + ++ FP P +D++ L+ DP R++ E+LAH ++ Q+
Sbjct: 227 SKLHAIIDPNHEIEFPDIP----EKDLQDVLKCCLKRDPKQRISIPELLAHPYV----QI 278
Query: 307 AQKPCKQ 313
P Q
Sbjct: 279 QTHPVNQ 285
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 130/295 (44%), Gaps = 42/295 (14%)
Query: 42 YVLGKQLGWGQ----FGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKL 97
Y + KQ+G G F V+ E ++ A K + + + + S + EI + KL
Sbjct: 14 YSILKQIGSGGSSKVFQVLNE-----KKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKL 67
Query: 98 SGHPNVVDLKAVYEEED-YVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSY 156
H + + YE D Y++++ME C +L L+K E + ++++++ V
Sbjct: 68 QQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 126
Query: 157 CHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN---LHGTVGSPFYIAPE 213
H +G+VH DLKP N L+ +KL DFG+A ++ VG+ Y+ PE
Sbjct: 127 IHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 182
Query: 214 VLAG------------GYNQAADVWSAGVILYILLSGMPPFWGKTK--SKIFDAVRAA-D 258
+ + +DVWS G ILY + G PF SK+ + +
Sbjct: 183 AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHE 242
Query: 259 LRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKPCKQ 313
+ FP P +D++ L+ DP R++ E+LAH ++ Q+ P Q
Sbjct: 243 IEFPDIP----EKDLQDVLKCCLKRDPKQRISIPELLAHPYV----QIQTHPVNQ 289
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 136/316 (43%), Gaps = 52/316 (16%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
I + +RY +G G +G + D TG +A K +++ + R+ + E+ ++
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 75
Query: 95 TKLSGHPNVVDLKAVY------EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR 148
+ H NV+ L V+ EE + V+L+ L G + + K + ++ + +
Sbjct: 76 KHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIY 132
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF 208
+++ + Y H ++HRDLKP N+ + + +K+ D GLA + + G V + +
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDGGLARH--TDDEMTGYVATRW 187
Query: 209 YIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW 266
Y APE++ YNQ D+WS G I+ LL+G F G + LR P
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI----LRLVGTPG 243
Query: 267 DHI-----SASAR--------------------------DLIMGMLRVDPSTRLTAAEVL 295
+ S SAR DL+ ML +D R+TAA+ L
Sbjct: 244 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQAL 303
Query: 296 AHSWMEECEQVAQKPC 311
AH++ + +P
Sbjct: 304 AHAYFAQYHDPDDEPV 319
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 138/338 (40%), Gaps = 75/338 (22%)
Query: 41 RYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH 100
RY K +G G G++ D +A K +++ R+ + E+ +M K H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLM-KCVNH 82
Query: 101 PNVVDLKAVY------EEEDYVHLLMELCAGG-------ELFHRLEKYGRFSETEARVIF 147
N++ L V+ EE V+++MEL EL H Y +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY----------LL 132
Query: 148 RHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSP 207
++ + + H G++HRDLKP NI++ S +K+ DFGLA + V +
Sbjct: 133 YQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPEVVTR 189
Query: 208 FYIAPEVLAG-GYNQAADVWSAGVILYILLSGMPPF--------WGKT-----------K 247
+Y APEV+ G GY + D+WS G I+ ++ G F W K
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFM 249
Query: 248 SKIFDAVRA-----------------ADLRFPSDPWDHI--SASARDLIMGMLRVDPSTR 288
K+ VR D+ FP+D + ++ ARDL+ ML +D S R
Sbjct: 250 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVIDASKR 309
Query: 289 LTAAEVLAHS----WMEECEQVAQKPCKQDDLCCKQLE 322
++ E L H W + E A P D KQL+
Sbjct: 310 ISVDEALQHPYINVWYDPSEAEAPPPKIPD----KQLD 343
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 135/318 (42%), Gaps = 70/318 (22%)
Query: 37 NLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTK 96
+L RY+ K LG G G++ D + +A K I L + V+ EI+I+ +
Sbjct: 8 DLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIV---LTDPQSVKHALREIKIIRR 64
Query: 97 LSGHPNVV---------------------DLKAVYEEEDYVHLLMELCAGGELFHRLEKY 135
L H N+V +L +VY ++Y+ +L + LE+
Sbjct: 65 LD-HDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYME--------TDLANVLEQ- 114
Query: 136 GRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLAT--- 192
G E AR+ L++ + Y H V+HRDLKP N+ + T+ +K+ DFGLA
Sbjct: 115 GPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLV--LKIGDFGLARIMD 172
Query: 193 --YIKAGQNLHGTVGSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGKTKS 248
Y G G V + +Y +P +L Y +A D+W+AG I +L+G F G +
Sbjct: 173 PHYSHKGHLSEGLV-TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHEL 231
Query: 249 K----IFDAVRAA------------------DLRFPSDPWDH----ISASARDLIMGMLR 282
+ I +++ D+ P P IS A D + +L
Sbjct: 232 EQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILT 291
Query: 283 VDPSTRLTAAEVLAHSWM 300
P RLTA E L+H +M
Sbjct: 292 FSPMDRLTAEEALSHPYM 309
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 139/338 (41%), Gaps = 75/338 (22%)
Query: 41 RYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH 100
RY K +G G G++ D +A K +++ R+ + E+ +M K H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLM-KCVNH 82
Query: 101 PNVVDLKAVY------EEEDYVHLLMELCAGG-------ELFHRLEKYGRFSETEARVIF 147
N++ L V+ EE V+++MEL EL H Y +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY----------LL 132
Query: 148 RHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSP 207
++ + + H G++HRDLKP NI++ S +K+ DFGLA + V +
Sbjct: 133 YQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTR 189
Query: 208 FYIAPEVLAG-GYNQAADVWSAGVILYILLSGMPPF--------WGKT-----------K 247
+Y APEV+ G GY + D+WS G I+ ++ G F W K
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM 249
Query: 248 SKIFDAVRA-----------------ADLRFPSDP-WDHISAS-ARDLIMGMLRVDPSTR 288
K+ VR D+ FP+D + + AS ARDL+ ML +D S R
Sbjct: 250 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 309
Query: 289 LTAAEVLAHS----WMEECEQVAQKPCKQDDLCCKQLE 322
++ E L H W + E A P D KQL+
Sbjct: 310 ISVDEALQHPYINVWYDPSEAEAPPPKIPD----KQLD 343
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 139/338 (41%), Gaps = 75/338 (22%)
Query: 41 RYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH 100
RY K +G G G++ D +A K +++ R+ + E+ +M K H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLM-KCVNH 82
Query: 101 PNVVDLKAVY------EEEDYVHLLMELCAGG-------ELFHRLEKYGRFSETEARVIF 147
N++ L V+ EE V+++MEL EL H Y +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY----------LL 132
Query: 148 RHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSP 207
++ + + H G++HRDLKP NI++ S +K+ DFGLA + V +
Sbjct: 133 YQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTR 189
Query: 208 FYIAPEVLAG-GYNQAADVWSAGVILYILLSGMPPF--------WGKT-----------K 247
+Y APEV+ G GY + D+WS G I+ ++ G F W K
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM 249
Query: 248 SKIFDAVRA-----------------ADLRFPSDP-WDHISAS-ARDLIMGMLRVDPSTR 288
K+ VR D+ FP+D + + AS ARDL+ ML +D S R
Sbjct: 250 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 309
Query: 289 LTAAEVLAHS----WMEECEQVAQKPCKQDDLCCKQLE 322
++ E L H W + E A P D KQL+
Sbjct: 310 ISVDEALQHPYINVWYDPSEAEAPPPKIPD----KQLD 343
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 134/326 (41%), Gaps = 71/326 (21%)
Query: 41 RYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH 100
RY K +G G G++ D +A K +++ R+ + E+ +M K H
Sbjct: 26 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLM-KCVNH 83
Query: 101 PNVVDLKAVY------EEEDYVHLLMELCAGG-------ELFHRLEKYGRFSETEARVIF 147
N++ L V+ EE V+++MEL EL H Y +
Sbjct: 84 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY----------LL 133
Query: 148 RHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSP 207
++ + + H G++HRDLKP NI++ S +K+ DFGLA + V +
Sbjct: 134 YQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTR 190
Query: 208 FYIAPEVLAG-GYNQAADVWSAGVILYILLSGMPPF--------WGKT-----------K 247
+Y APEV+ G GY + D+WS G I+ ++ G F W K
Sbjct: 191 YYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFM 250
Query: 248 SKIFDAVRA-----------------ADLRFPSDP-WDHISAS-ARDLIMGMLRVDPSTR 288
K+ VR D+ FP+D + + AS ARDL+ ML +D S R
Sbjct: 251 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 310
Query: 289 LTAAEVLAHS----WMEECEQVAQKP 310
++ E L H W + E A P
Sbjct: 311 ISVDEALQHPYINVWYDPSEAEAPPP 336
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 134/326 (41%), Gaps = 71/326 (21%)
Query: 41 RYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH 100
RY K +G G G++ D +A K +++ R+ + E+ +M K H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLM-KCVNH 82
Query: 101 PNVVDLKAVY------EEEDYVHLLMELCAGG-------ELFHRLEKYGRFSETEARVIF 147
N++ L V+ EE V+++MEL EL H Y +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY----------LL 132
Query: 148 RHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSP 207
++ + + H G++HRDLKP NI++ S +K+ DFGLA + V +
Sbjct: 133 YQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTR 189
Query: 208 FYIAPEVLAG-GYNQAADVWSAGVILYILLSGMPPF--------WGKT-----------K 247
+Y APEV+ G GY + D+WS G I+ ++ G F W K
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFM 249
Query: 248 SKIFDAVRA-----------------ADLRFPSDP-WDHISAS-ARDLIMGMLRVDPSTR 288
K+ VR D+ FP+D + + AS ARDL+ ML +D S R
Sbjct: 250 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 309
Query: 289 LTAAEVLAHS----WMEECEQVAQKP 310
++ E L H W + E A P
Sbjct: 310 ISVDEALQHPYINVWYDPSEAEAPPP 335
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 101/213 (47%), Gaps = 16/213 (7%)
Query: 41 RYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH 100
RY + K +G G FG + + D + +A K + ++ R EI I+ L
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFH----RQAAEEIRILEHLRKQ 153
Query: 101 P-----NVVDLKAVYEEEDYVHLLMELCAGG--ELFHRLEKYGRFSETEARVIFRHLMQV 153
NV+ + + +++ + EL + EL + K+ FS R ++Q
Sbjct: 154 DKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKK-NKFQGFSLPLVRKFAHSILQC 212
Query: 154 VSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE 213
+ H N ++H DLKPENILL + S IK+ DFG + Y Q ++ + S FY APE
Sbjct: 213 LDALHKNRIIHCDLKPENILLKQQGRSG-IKVIDFGSSCY--EHQRVYTXIQSRFYRAPE 269
Query: 214 VLAGG-YNQAADVWSAGVILYILLSGMPPFWGK 245
V+ G Y D+WS G IL LL+G P G+
Sbjct: 270 VILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 101/213 (47%), Gaps = 16/213 (7%)
Query: 41 RYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH 100
RY + K +G G FG + + D + +A K + ++ R EI I+ L
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFH----RQAAEEIRILEHLRKQ 153
Query: 101 P-----NVVDLKAVYEEEDYVHLLMELCAGG--ELFHRLEKYGRFSETEARVIFRHLMQV 153
NV+ + + +++ + EL + EL + K+ FS R ++Q
Sbjct: 154 DKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKK-NKFQGFSLPLVRKFAHSILQC 212
Query: 154 VSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE 213
+ H N ++H DLKPENILL + S IK+ DFG + Y Q ++ + S FY APE
Sbjct: 213 LDALHKNRIIHCDLKPENILLKQQGRSG-IKVIDFGSSCY--EHQRVYTXIQSRFYRAPE 269
Query: 214 VLAGG-YNQAADVWSAGVILYILLSGMPPFWGK 245
V+ G Y D+WS G IL LL+G P G+
Sbjct: 270 VILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 101/213 (47%), Gaps = 16/213 (7%)
Query: 41 RYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH 100
RY + K +G G FG + + D + +A K + ++ R EI I+ L
Sbjct: 98 RYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFH----RQAAEEIRILEHLRKQ 153
Query: 101 P-----NVVDLKAVYEEEDYVHLLMELCAGG--ELFHRLEKYGRFSETEARVIFRHLMQV 153
NV+ + + +++ + EL + EL + K+ FS R ++Q
Sbjct: 154 DKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKK-NKFQGFSLPLVRKFAHSILQC 212
Query: 154 VSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPE 213
+ H N ++H DLKPENILL + S IK+ DFG + Y Q ++ + S FY APE
Sbjct: 213 LDALHKNRIIHCDLKPENILLKQQGRSG-IKVIDFGSSCY--EHQRVYXXIQSRFYRAPE 269
Query: 214 VLAGG-YNQAADVWSAGVILYILLSGMPPFWGK 245
V+ G Y D+WS G IL LL+G P G+
Sbjct: 270 VILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 133/326 (40%), Gaps = 71/326 (21%)
Query: 41 RYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH 100
RY K +G G G++ D +A K +++ R+ + E+ +M K H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLM-KCVNH 82
Query: 101 PNVVDLKAVY------EEEDYVHLLMELCAGG-------ELFHRLEKYGRFSETEARVIF 147
N++ L V+ EE V+++MEL EL H Y +
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY----------LL 132
Query: 148 RHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSP 207
++ + + H G++HRDLKP NI++ S +K+ DFGLA + V +
Sbjct: 133 YQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMEPEVVTR 189
Query: 208 FYIAPEVLAG-GYNQAADVWSAGVIL------YILLSGM-----------------PPFW 243
+Y APEV+ G GY + D+WS G I+ IL G P F
Sbjct: 190 YYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFM 249
Query: 244 GKTKSKIFDAVRA-------------ADLRFPSDP-WDHISAS-ARDLIMGMLRVDPSTR 288
K + + V D+ FP+D + + AS ARDL+ ML +D S R
Sbjct: 250 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 309
Query: 289 LTAAEVLAHS----WMEECEQVAQKP 310
++ E L H W + E A P
Sbjct: 310 ISVDEALQHPYINVWYDPSEAEAPPP 335
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 134/326 (41%), Gaps = 71/326 (21%)
Query: 41 RYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH 100
RY K +G G G++ D +A K +++ R+ + E+ +M K H
Sbjct: 27 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLM-KCVNH 84
Query: 101 PNVVDLKAVY------EEEDYVHLLMELCAGG-------ELFHRLEKYGRFSETEARVIF 147
N++ L V+ EE V+++MEL EL H Y +
Sbjct: 85 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY----------LL 134
Query: 148 RHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSP 207
++ + + H G++HRDLKP NI++ S +K+ DFGLA + V +
Sbjct: 135 YQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMVPFVVTR 191
Query: 208 FYIAPEVLAG-GYNQAADVWSAGVILYILLSGMPPF--------WGKT-----------K 247
+Y APEV+ G GY + D+WS G I+ ++ G F W K
Sbjct: 192 YYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFM 251
Query: 248 SKIFDAVRA-----------------ADLRFPSDP-WDHISAS-ARDLIMGMLRVDPSTR 288
K+ VR D+ FP+D + + AS ARDL+ ML +D S R
Sbjct: 252 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 311
Query: 289 LTAAEVLAHS----WMEECEQVAQKP 310
++ E L H W + E A P
Sbjct: 312 ISVDEALQHPYINVWYDPSEAEAPPP 337
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 126/329 (38%), Gaps = 72/329 (21%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKL 97
LS RY + LG G FG + EC D G I K+ E RS EI+++ L
Sbjct: 12 LSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARS---EIQVLEHL 68
Query: 98 -SGHPN----VVDLKAVYEEEDYVHLLMELCAGGEL-FHRLEKYGRFSETEARVIFRHLM 151
+ PN V + +E ++ ++ EL F + + F R + +
Sbjct: 69 NTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQIC 128
Query: 152 QVVSYCHGNGVVHRDLKPENILLATKSSSSP----------------IKLADFGLATYIK 195
+ V++ H N + H DLKPENIL + IK+ DFG ATY
Sbjct: 129 KSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATY-- 186
Query: 196 AGQNLHGT-VGSPFYIAPEV-LAGGYNQAADVWSAGVIL--YIL-------------LSG 238
H T V Y APEV LA G++Q DVWS G IL Y L L+
Sbjct: 187 -DDEHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAM 245
Query: 239 MPPFWGKTKSKIFDAVRAADLRFPSD--PWDHISASAR---------------------- 274
M G + R F D WD S++ R
Sbjct: 246 MERILGPLPKHMIQKTRKRKY-FHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHER 304
Query: 275 --DLIMGMLRVDPSTRLTAAEVLAHSWME 301
DLI ML DP+ R+T E L H + +
Sbjct: 305 LFDLIQKMLEYDPAKRITLREALKHPFFD 333
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 126/292 (43%), Gaps = 52/292 (17%)
Query: 48 LGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVR-SIKLEIEIMTKLSGHPNVVDL 106
LG G FGV+ E +K A K I RL E R + E++ + KL HP +V
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRI---RLPNRELAREKVMREVKALAKLE-HPGIVRY 68
Query: 107 KAVYEEED------------YVHLLMELCAGGELFHRLEKYGRFSETEARV---IFRHLM 151
+ E++ Y+++ M+LC L + E E V IF +
Sbjct: 69 FNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIA 128
Query: 152 QVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLH---------- 201
+ V + H G++HRDLKP NI +K+ DFGL T + +
Sbjct: 129 EAVEFLHSKGLMHRDLKPSNIFFTMDDV---VKVGDFGLVTAMDQDEEEQTVLTPMPAYA 185
Query: 202 ---GTVGSPFYIAPEVLAGG-YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAA 257
G VG+ Y++PE + G Y+ D++S G+IL+ LL PF + + ++
Sbjct: 186 RHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQME-RVRTLTDVR 241
Query: 258 DLRFP-----SDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECE 304
+L+FP P +++ ++ ML P R A ++ ++ E+ +
Sbjct: 242 NLKFPPLFTQKYPCEYV------MVQDMLSPSPMERPEAINIIENAVFEDLD 287
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 133/326 (40%), Gaps = 71/326 (21%)
Query: 41 RYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH 100
RY K +G G G++ D +A K +++ R+ + E+ +M K H
Sbjct: 30 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLM-KCVNH 87
Query: 101 PNVVDLKAVY------EEEDYVHLLMELCAGG-------ELFHRLEKYGRFSETEARVIF 147
N++ L V+ EE V+++MEL EL H Y +
Sbjct: 88 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY----------LL 137
Query: 148 RHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSP 207
++ + + H G++HRDLKP NI++ S +K+ DFGLA + V +
Sbjct: 138 YQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTR 194
Query: 208 FYIAPEVLAG-GYNQAADVWSAGVIL------YILLSGM-----------------PPFW 243
+Y APEV+ G GY + D+WS G I+ IL G P F
Sbjct: 195 YYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFM 254
Query: 244 GKTKSKIFDAVRA-------------ADLRFPSDP-WDHISAS-ARDLIMGMLRVDPSTR 288
K + + V D+ FP+D + + AS ARDL+ ML +D S R
Sbjct: 255 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 314
Query: 289 LTAAEVLAHS----WMEECEQVAQKP 310
++ E L H W + E A P
Sbjct: 315 ISVDEALQHPYINVWYDPSEAEAPPP 340
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 133/326 (40%), Gaps = 71/326 (21%)
Query: 41 RYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH 100
RY K +G G G++ D +A K +++ R+ + E+ +M K H
Sbjct: 19 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLM-KCVNH 76
Query: 101 PNVVDLKAVY------EEEDYVHLLMELCAGG-------ELFHRLEKYGRFSETEARVIF 147
N++ L V+ EE V+++MEL EL H Y +
Sbjct: 77 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSY----------LL 126
Query: 148 RHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSP 207
++ + + H G++HRDLKP NI++ S +K+ DFGLA + V +
Sbjct: 127 YQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTR 183
Query: 208 FYIAPEVLAG-GYNQAADVWSAGVIL------YILLSGM-----------------PPFW 243
+Y APEV+ G GY + D+WS G I+ IL G P F
Sbjct: 184 YYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFM 243
Query: 244 GKTKSKIFDAVRA-------------ADLRFPSDP-WDHISAS-ARDLIMGMLRVDPSTR 288
K + + V D+ FP+D + + AS ARDL+ ML +D S R
Sbjct: 244 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR 303
Query: 289 LTAAEVLAHS----WMEECEQVAQKP 310
++ E L H W + E A P
Sbjct: 304 ISVDEALQHPYINVWYDPSEAEAPPP 329
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 94/215 (43%), Gaps = 42/215 (19%)
Query: 135 YGRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYI 194
Y ++ + R +++ + YCH G++HRD+KP N+++ + ++L D+GLA +
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFY 182
Query: 195 KAGQNLHGTVGSPFYIAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFD 252
GQ + V S ++ PE+L Y+ + D+WS G +L ++ PF+ + +D
Sbjct: 183 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN--YD 240
Query: 253 A-VRAADLRFPSDPWDHI-----------------------------------SASARDL 276
VR A + D +D+I S A D
Sbjct: 241 QLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDF 300
Query: 277 IMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKPC 311
+ +LR D +RLTA E + H + + +PC
Sbjct: 301 LDKLLRYDHQSRLTAREAMEHPYFYPVVKEQSQPC 335
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 131/342 (38%), Gaps = 78/342 (22%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVR-SIKLEIEIMTK 96
L +RY + LG G FG + +C D G I K+ VE + + +LEI ++ K
Sbjct: 31 LQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKN----VEKYKEAARLEINVLEK 86
Query: 97 LS-GHPNVVDLKAVYEEEDYVHLLMELCAGGEL-------FHRLEKYGRFSETEARVIFR 148
++ P+ +L + D+ +C EL F + Y + + R +
Sbjct: 87 INEKDPDNKNL--CVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQVRHMAF 144
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKS----------------SSSPIKLADFGLAT 192
L Q V + H N + H DLKPENIL S+ +++ DFG AT
Sbjct: 145 QLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSAT 204
Query: 193 YIKAGQNLHGT-VGSPFYIAPEV-LAGGYNQAADVWSAGVILYILLSGMPPF-------- 242
+ H T V + Y APEV L G++Q DVWS G I++ G F
Sbjct: 205 F---DHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREH 261
Query: 243 -------WGKTKSKIFDAVRAADLRFPSD-PWDHISASAR-------------------- 274
G S++ R + WD +++ R
Sbjct: 262 LAMMERILGPIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVRENCKPLRRYLTSEAEEH 321
Query: 275 ----DLIMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKPCK 312
DLI ML +P+ RLT E L H + A+ P K
Sbjct: 322 HQLFDLIESMLEYEPAKRLTLGEALQHPFFARLR--AEPPNK 361
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 120/262 (45%), Gaps = 25/262 (9%)
Query: 43 VLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPN 102
+ +LG GQFG + E K +A K++ +D + +V E +M ++ HPN
Sbjct: 14 TMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPN 68
Query: 103 VVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVS---YCHG 159
+V L V E +++ E G L L + R E A V+ Q+ S Y
Sbjct: 69 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEK 127
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF---YIAPEVLA 216
+HRDL N L+ + +K+ADFGL+ + G G+ F + APE LA
Sbjct: 128 KNFIHRDLAARNCLVG---ENHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAPESLA 183
Query: 217 GGYNQ---AADVWSAGVILY-ILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISAS 272
YN+ +DVW+ GV+L+ I GM P+ G S++++ + D R +
Sbjct: 184 --YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE-KDYRMERP--EGCPEK 238
Query: 273 ARDLIMGMLRVDPSTRLTAAEV 294
+L+ + +PS R + AE+
Sbjct: 239 VYELMRACWQWNPSDRPSFAEI 260
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 101/212 (47%), Gaps = 13/212 (6%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKL-EIEIMTKLS 98
+ Y+ +LG G + + + K T ++A K I RL E + E+ ++ L
Sbjct: 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEI---RLEHEEGAPCTAIREVSLLKDLK 58
Query: 99 GHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRF-SETEARVIFRHLMQVVSYC 157
H N+V L + E + L+ E +L L+ G + ++ L++ ++YC
Sbjct: 59 -HANIVTLHDIIHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYC 116
Query: 158 HGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIK-AGQNLHGTVGSPFYIAPEVLA 216
H V+HRDLKP+N+L+ + +KLADFGLA + V + +Y P++L
Sbjct: 117 HRQKVLHRDLKPQNLLINERGE---LKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILL 173
Query: 217 GG--YNQAADVWSAGVILYILLSGMPPFWGKT 246
G Y+ D+W G I Y + +G P F G T
Sbjct: 174 GSTDYSTQIDMWGVGCIFYEMATGRPLFPGST 205
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 120/262 (45%), Gaps = 25/262 (9%)
Query: 43 VLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPN 102
+ +LG GQ+G + E K +A K++ +D + +V E +M ++ HPN
Sbjct: 14 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPN 68
Query: 103 VVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVS---YCHG 159
+V L V E +++ E G L L + R E A V+ Q+ S Y
Sbjct: 69 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEK 127
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF---YIAPEVLA 216
+HRDL N L+ + +K+ADFGL+ + G G+ F + APE LA
Sbjct: 128 KNFIHRDLAARNCLVG---ENHLVKVADFGLSR-LMTGDTFTAHAGAKFPIKWTAPESLA 183
Query: 217 GGYNQ---AADVWSAGVILY-ILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISAS 272
YN+ +DVW+ GV+L+ I GM P+ G S++++ + D R +
Sbjct: 184 --YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE-KDYRMERP--EGCPEK 238
Query: 273 ARDLIMGMLRVDPSTRLTAAEV 294
+L+ + +PS R + AE+
Sbjct: 239 VYELMRACWQWNPSDRPSFAEI 260
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 122/273 (44%), Gaps = 47/273 (17%)
Query: 3 TNNSEDSSQLSTQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECSDK 62
T ++ SQ Q + S T ++ + DRY + +G G +G + E DK
Sbjct: 16 TQHTVSGSQQEGQQRKQHHSSKPTASMPRPHSDWQIPDRYEIRHLIGTGSYGHVCEAYDK 75
Query: 63 FTGEVLACKSIAK--DRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVY-----EEEDY 115
V+A K I + + L+ D + I EI I+ +L+ H +VV + + E+ D
Sbjct: 76 LEKRVVAIKKILRVFEDLI---DCKRILREIAILNRLN-HDHVVKVLDIVIPKDVEKFDE 131
Query: 116 VHLLMELCAGGELFHRLEKYGRF-SETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILL 174
+++++E+ F +L + + +E + + +L+ V Y H G++HRDLKP N L+
Sbjct: 132 LYVVLEIADSD--FKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLV 189
Query: 175 ATKSSSSPIKLADFGLATYIKAGQN----------------------------LHGTVGS 206
S +K+ DFGLA + +N L G V +
Sbjct: 190 NQDCS---VKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVT 246
Query: 207 PFYIAPE--VLAGGYNQAADVWSAGVILYILLS 237
+Y APE +L Y +A DVWS G I LL+
Sbjct: 247 RWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 69/181 (38%), Gaps = 29/181 (16%)
Query: 145 VIFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFG-----LATYIKAGQN 199
V F H + G+ V PE ILL + + I + G L IK
Sbjct: 228 VTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEA-IDVWSIGCIFAELLNMIKENVA 286
Query: 200 LHGTVG------SPFYIAPEVLAGG---YNQAADVWSAGVILYIL-------LSGMPPFW 243
H G S F ++P+ AG ++ + VI IL + +
Sbjct: 287 YHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKED 346
Query: 244 GKTKSKIFDAVRAADL--RFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAHSWME 301
K +IF DL RFP+ SA A L+ ML +P+ R+T E LAH + +
Sbjct: 347 AKRYIRIFPKREGTDLAERFPAS-----SADAIHLLKRMLVFNPNKRITINECLAHPFFK 401
Query: 302 E 302
E
Sbjct: 402 E 402
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 121/262 (46%), Gaps = 25/262 (9%)
Query: 43 VLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPN 102
+ +LG GQ+G + E K +A K++ +D + +V E +M ++ HPN
Sbjct: 14 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPN 68
Query: 103 VVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVS---YCHG 159
+V L V E ++++E G L L + R E A V+ Q+ S Y
Sbjct: 69 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEK 127
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF---YIAPEVLA 216
+HRDL N L+ + +K+ADFGL+ + G G+ F + APE LA
Sbjct: 128 KNFIHRDLAARNCLVG---ENHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAPESLA 183
Query: 217 GGYNQ---AADVWSAGVILY-ILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISAS 272
YN+ +DVW+ GV+L+ I GM P+ G S++++ + D R +
Sbjct: 184 --YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE-KDYRMERP--EGCPEK 238
Query: 273 ARDLIMGMLRVDPSTRLTAAEV 294
+L+ + +PS R + AE+
Sbjct: 239 VYELMRACWQWNPSDRPSFAEI 260
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 121/262 (46%), Gaps = 25/262 (9%)
Query: 43 VLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPN 102
+ +LG GQ+G + E K +A K++ +D + +V E +M ++ HPN
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPN 70
Query: 103 VVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVS---YCHG 159
+V L V E ++++E G L L + R E A V+ Q+ S Y
Sbjct: 71 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEK 129
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF---YIAPEVLA 216
+HRDL N L+ + +K+ADFGL+ + G G+ F + APE LA
Sbjct: 130 KNFIHRDLAARNCLVG---ENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 185
Query: 217 GGYNQ---AADVWSAGVILY-ILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISAS 272
YN+ +DVW+ GV+L+ I GM P+ G S++++ + D R +
Sbjct: 186 --YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP--EGCPEK 240
Query: 273 ARDLIMGMLRVDPSTRLTAAEV 294
+L+ + +PS R + AE+
Sbjct: 241 VYELMRACWQWNPSDRPSFAEI 262
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 120/260 (46%), Gaps = 21/260 (8%)
Query: 43 VLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPN 102
+ +LG GQ+G + E K +A K++ +D + +V E +M ++ HPN
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPN 75
Query: 103 VVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVS---YCHG 159
+V L V E ++++E G L L + R E A V+ Q+ S Y
Sbjct: 76 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEK 134
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF---YIAPEVLA 216
+HRDL N L+ + +K+ADFGL+ + G G+ F + APE LA
Sbjct: 135 KNFIHRDLAARNCLVG---ENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 190
Query: 217 -GGYNQAADVWSAGVILY-ILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASAR 274
++ +DVW+ GV+L+ I GM P+ G S++++ + D R +
Sbjct: 191 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP--EGCPEKVY 247
Query: 275 DLIMGMLRVDPSTRLTAAEV 294
+L+ + +PS R + AE+
Sbjct: 248 ELMRACWQWNPSDRPSFAEI 267
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 120/262 (45%), Gaps = 25/262 (9%)
Query: 43 VLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPN 102
+ +LG GQ+G + E K +A K++ +D + +V E +M ++ HPN
Sbjct: 18 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPN 72
Query: 103 VVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVS---YCHG 159
+V L V E +++ E G L L + R E A V+ Q+ S Y
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEK 131
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF---YIAPEVLA 216
+HRDL N L+ + +K+ADFGL+ + G G+ F + APE LA
Sbjct: 132 KNFIHRDLAARNCLVG---ENHLVKVADFGLSR-LMTGDTYTAPAGAKFPIKWTAPESLA 187
Query: 217 GGYNQ---AADVWSAGVILY-ILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISAS 272
YN+ +DVW+ GV+L+ I GM P+ G S++++ + D R +
Sbjct: 188 --YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP--EGCPEK 242
Query: 273 ARDLIMGMLRVDPSTRLTAAEV 294
+L+ + +PS R + AE+
Sbjct: 243 VYELMRACWQWNPSDRPSFAEI 264
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 120/262 (45%), Gaps = 25/262 (9%)
Query: 43 VLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPN 102
+ +LG GQ+G + E K +A K++ +D + +V E +M ++ HPN
Sbjct: 17 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPN 71
Query: 103 VVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVS---YCHG 159
+V L V E +++ E G L L + R E A V+ Q+ S Y
Sbjct: 72 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEK 130
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF---YIAPEVLA 216
+HRDL N L+ + +K+ADFGL+ + G G+ F + APE LA
Sbjct: 131 KNFIHRDLAARNCLVG---ENHLVKVADFGLSR-LMTGDTYTAPAGAKFPIKWTAPESLA 186
Query: 217 GGYNQ---AADVWSAGVILY-ILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISAS 272
YN+ +DVW+ GV+L+ I GM P+ G S++++ + D R +
Sbjct: 187 --YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP--EGCPEK 241
Query: 273 ARDLIMGMLRVDPSTRLTAAEV 294
+L+ + +PS R + AE+
Sbjct: 242 VYELMRACWQWNPSDRPSFAEI 263
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 121/262 (46%), Gaps = 25/262 (9%)
Query: 43 VLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPN 102
+ +LG GQ+G + E K +A K++ +D + +V E +M ++ HPN
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPN 70
Query: 103 VVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVS---YCHG 159
+V L V E ++++E G L L + R E A V+ Q+ S Y
Sbjct: 71 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEK 129
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF---YIAPEVLA 216
+HRDL N L+ + +K+ADFGL+ + G G+ F + APE LA
Sbjct: 130 KNFIHRDLAARNCLVG---ENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 185
Query: 217 GGYNQ---AADVWSAGVILY-ILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISAS 272
YN+ +DVW+ GV+L+ I GM P+ G S++++ + D R +
Sbjct: 186 --YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP--EGCPEK 240
Query: 273 ARDLIMGMLRVDPSTRLTAAEV 294
+L+ + +PS R + AE+
Sbjct: 241 VYELMRACWQWNPSDRPSFAEI 262
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 121/262 (46%), Gaps = 25/262 (9%)
Query: 43 VLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPN 102
+ +LG GQ+G + E K +A K++ +D + +V E +M ++ HPN
Sbjct: 17 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPN 71
Query: 103 VVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVS---YCHG 159
+V L V E ++++E G L L + R E A V+ Q+ S Y
Sbjct: 72 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEK 130
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF---YIAPEVLA 216
+HRDL N L+ + +K+ADFGL+ + G G+ F + APE LA
Sbjct: 131 KNFIHRDLAARNCLVG---ENHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAPESLA 186
Query: 217 GGYNQ---AADVWSAGVILY-ILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISAS 272
YN+ +DVW+ GV+L+ I GM P+ G S++++ + D R +
Sbjct: 187 --YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP--EGCPEK 241
Query: 273 ARDLIMGMLRVDPSTRLTAAEV 294
+L+ + +PS R + AE+
Sbjct: 242 VYELMRACWQWNPSDRPSFAEI 263
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 106/208 (50%), Gaps = 17/208 (8%)
Query: 43 VLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPN 102
+G+++G G FG + + K+ G+V A K + T + +++ K E+ ++ K + H N
Sbjct: 15 TVGQRIGSGSFGTVYK--GKWHGDV-AVKMLNVT-APTPQQLQAFKNEVGVLRK-TRHVN 69
Query: 103 VVDLKAVYEEEDYVHLLMELCAGGELFHRLE-KYGRFSETEARVIFRHLMQVVSYCHGNG 161
++ L Y + + ++ + C G L+H L +F + I R + + Y H
Sbjct: 70 IL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS 128
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATY---IKAGQNLHGTVGSPFYIAPEVL--- 215
++HRDLK NI L ++ +K+ DFGLAT GS ++APEV+
Sbjct: 129 IIHRDLKSNNIFLHEDNT---VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 185
Query: 216 -AGGYNQAADVWSAGVILYILLSGMPPF 242
+ Y+ +DV++ G++LY L++G P+
Sbjct: 186 DSNPYSFQSDVYAFGIVLYELMTGQLPY 213
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 104/202 (51%), Gaps = 21/202 (10%)
Query: 48 LGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLK 107
+G G FGV+ C K+ + +A K I + + ++ +E+ +++++ HPN+V L
Sbjct: 17 VGRGAFGVV--CKAKWRAKDVAIKQIESE-----SERKAFIVELRQLSRVN-HPNIVKLY 68
Query: 108 AVYEEEDYVHLLMELCAGGELF---HRLEKYGRFSETEARVIFRHLMQVVSYCHG---NG 161
+ V L+ME GG L+ H E ++ A Q V+Y H
Sbjct: 69 GACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA 126
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAG-GYN 220
++HRDLKP N+LL + + +K+ DFG A I+ ++ GS ++APEV G Y+
Sbjct: 127 LIHRDLKPPNLLLV--AGGTVLKICDFGTACDIQT--HMTNNKGSAAWMAPEVFEGSNYS 182
Query: 221 QAADVWSAGVILYILLSGMPPF 242
+ DV+S G+IL+ +++ PF
Sbjct: 183 EKCDVFSWGIILWEVITRRKPF 204
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 120/262 (45%), Gaps = 25/262 (9%)
Query: 43 VLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPN 102
+ +LG GQ+G + E K +A K++ +D + +V E +M ++ HPN
Sbjct: 18 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPN 72
Query: 103 VVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVS---YCHG 159
+V L V E +++ E G L L + R E A V+ Q+ S Y
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEK 131
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF---YIAPEVLA 216
+HRDL N L+ + +K+ADFGL+ + G G+ F + APE LA
Sbjct: 132 KNFIHRDLAARNCLVG---ENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 187
Query: 217 GGYNQ---AADVWSAGVILY-ILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISAS 272
YN+ +DVW+ GV+L+ I GM P+ G S++++ + D R +
Sbjct: 188 --YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP--EGCPEK 242
Query: 273 ARDLIMGMLRVDPSTRLTAAEV 294
+L+ + +PS R + AE+
Sbjct: 243 VYELMRACWQWNPSDRPSFAEI 264
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 120/262 (45%), Gaps = 25/262 (9%)
Query: 43 VLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPN 102
+ +LG GQ+G + E K +A K++ +D + +V E +M ++ HPN
Sbjct: 29 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPN 83
Query: 103 VVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVS---YCHG 159
+V L V E +++ E G L L + R E A V+ Q+ S Y
Sbjct: 84 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEK 142
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF---YIAPEVLA 216
+HRDL N L+ + +K+ADFGL+ + G G+ F + APE LA
Sbjct: 143 KNFIHRDLAARNCLVG---ENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 198
Query: 217 GGYNQ---AADVWSAGVILY-ILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISAS 272
YN+ +DVW+ GV+L+ I GM P+ G S++++ + D R +
Sbjct: 199 --YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP--EGCPEK 253
Query: 273 ARDLIMGMLRVDPSTRLTAAEV 294
+L+ + +PS R + AE+
Sbjct: 254 VYELMRACWQWNPSDRPSFAEI 275
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 120/262 (45%), Gaps = 25/262 (9%)
Query: 43 VLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPN 102
+ +LG GQ+G + E K +A K++ +D + +V E +M ++ HPN
Sbjct: 18 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPN 72
Query: 103 VVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVS---YCHG 159
+V L V E +++ E G L L + R E A V+ Q+ S Y
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEK 131
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF---YIAPEVLA 216
+HRDL N L+ + +K+ADFGL+ + G G+ F + APE LA
Sbjct: 132 KNFIHRDLAARNCLVG---ENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 187
Query: 217 GGYNQ---AADVWSAGVILY-ILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISAS 272
YN+ +DVW+ GV+L+ I GM P+ G S++++ + D R +
Sbjct: 188 --YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP--EGCPEK 242
Query: 273 ARDLIMGMLRVDPSTRLTAAEV 294
+L+ + +PS R + AE+
Sbjct: 243 VYELMRACWQWNPSDRPSFAEI 264
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 119/260 (45%), Gaps = 21/260 (8%)
Query: 43 VLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPN 102
+ +LG GQ+G + E K +A K++ +D + +V E +M ++ HPN
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPN 75
Query: 103 VVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVS---YCHG 159
+V L V E +++ E G L L + R E A V+ Q+ S Y
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEK 134
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF---YIAPEVLA 216
+HRDL N L+ + +K+ADFGL+ + G G+ F + APE LA
Sbjct: 135 KNFIHRDLAARNCLVG---ENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 190
Query: 217 -GGYNQAADVWSAGVILY-ILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASAR 274
++ +DVW+ GV+L+ I GM P+ G S++++ + D R +
Sbjct: 191 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP--EGCPEKVY 247
Query: 275 DLIMGMLRVDPSTRLTAAEV 294
+L+ + +PS R + AE+
Sbjct: 248 ELMRACWQWNPSDRPSFAEI 267
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 106/208 (50%), Gaps = 17/208 (8%)
Query: 43 VLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPN 102
+G+++G G FG + + K+ G+V A K + T + +++ K E+ ++ K + H N
Sbjct: 27 TVGQRIGSGSFGTVYK--GKWHGDV-AVKMLNVT-APTPQQLQAFKNEVGVLRK-TRHVN 81
Query: 103 VVDLKAVYEEEDYVHLLMELCAGGELFHRLE-KYGRFSETEARVIFRHLMQVVSYCHGNG 161
++ L Y + + ++ + C G L+H L +F + I R + + Y H
Sbjct: 82 IL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS 140
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLAT---YIKAGQNLHGTVGSPFYIAPEVL--- 215
++HRDLK NI L ++ +K+ DFGLAT GS ++APEV+
Sbjct: 141 IIHRDLKSNNIFLHEDNT---VKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 197
Query: 216 -AGGYNQAADVWSAGVILYILLSGMPPF 242
+ Y+ +DV++ G++LY L++G P+
Sbjct: 198 DSNPYSFQSDVYAFGIVLYELMTGQLPY 225
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 120/262 (45%), Gaps = 25/262 (9%)
Query: 43 VLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPN 102
+ +LG GQ+G + E K +A K++ +D + +V E +M ++ HPN
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPN 75
Query: 103 VVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVS---YCHG 159
+V L V E +++ E G L L + R E A V+ Q+ S Y
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEK 134
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF---YIAPEVLA 216
+HRDL N L+ + +K+ADFGL+ + G G+ F + APE LA
Sbjct: 135 KNFIHRDLAARNCLVG---ENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 190
Query: 217 GGYNQ---AADVWSAGVILY-ILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISAS 272
YN+ +DVW+ GV+L+ I GM P+ G S++++ + D R +
Sbjct: 191 --YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP--EGCPEK 245
Query: 273 ARDLIMGMLRVDPSTRLTAAEV 294
+L+ + +PS R + AE+
Sbjct: 246 VYELMRACWQWNPSDRPSFAEI 267
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 119/260 (45%), Gaps = 21/260 (8%)
Query: 43 VLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPN 102
+ +LG GQ+G + E K +A K++ +D + +V E +M ++ HPN
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPN 70
Query: 103 VVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVS---YCHG 159
+V L V E +++ E G L L + R E A V+ Q+ S Y
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEK 129
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF---YIAPEVLA 216
+HRDL N L+ + +K+ADFGL+ + G G+ F + APE LA
Sbjct: 130 KNFIHRDLAARNCLVG---ENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 185
Query: 217 -GGYNQAADVWSAGVILY-ILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASAR 274
++ +DVW+ GV+L+ I GM P+ G S++++ + D R +
Sbjct: 186 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP--EGCPEKVY 242
Query: 275 DLIMGMLRVDPSTRLTAAEV 294
+L+ + +PS R + AE+
Sbjct: 243 ELMRACWQWNPSDRPSFAEI 262
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 104/202 (51%), Gaps = 21/202 (10%)
Query: 48 LGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLK 107
+G G FGV+ C K+ + +A K I + + ++ +E+ +++++ HPN+V L
Sbjct: 16 VGRGAFGVV--CKAKWRAKDVAIKQIESE-----SERKAFIVELRQLSRVN-HPNIVKLY 67
Query: 108 AVYEEEDYVHLLMELCAGGELF---HRLEKYGRFSETEARVIFRHLMQVVSYCHG---NG 161
+ V L+ME GG L+ H E ++ A Q V+Y H
Sbjct: 68 GACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA 125
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAG-GYN 220
++HRDLKP N+LL + + +K+ DFG A I+ ++ GS ++APEV G Y+
Sbjct: 126 LIHRDLKPPNLLLV--AGGTVLKICDFGTACDIQT--HMTNNKGSAAWMAPEVFEGSNYS 181
Query: 221 QAADVWSAGVILYILLSGMPPF 242
+ DV+S G+IL+ +++ PF
Sbjct: 182 EKCDVFSWGIILWEVITRRKPF 203
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 120/262 (45%), Gaps = 25/262 (9%)
Query: 43 VLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPN 102
+ +LG GQ+G + E K +A K++ +D + +V E +M ++ HPN
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPN 70
Query: 103 VVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVS---YCHG 159
+V L V E +++ E G L L + R E A V+ Q+ S Y
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEK 129
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF---YIAPEVLA 216
+HRDL N L+ + +K+ADFGL+ + G G+ F + APE LA
Sbjct: 130 KNFIHRDLAARNCLVG---ENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 185
Query: 217 GGYNQ---AADVWSAGVILY-ILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISAS 272
YN+ +DVW+ GV+L+ I GM P+ G S++++ + D R +
Sbjct: 186 --YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP--EGCPEK 240
Query: 273 ARDLIMGMLRVDPSTRLTAAEV 294
+L+ + +PS R + AE+
Sbjct: 241 VYELMRACWQWNPSDRPSFAEI 262
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 120/262 (45%), Gaps = 25/262 (9%)
Query: 43 VLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPN 102
+ +LG GQ+G + E K +A K++ +D + +V E +M ++ HPN
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPN 75
Query: 103 VVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVS---YCHG 159
+V L V E +++ E G L L + R E A V+ Q+ S Y
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEK 134
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF---YIAPEVLA 216
+HRDL N L+ + +K+ADFGL+ + G G+ F + APE LA
Sbjct: 135 KNFIHRDLAARNCLVG---ENHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAPESLA 190
Query: 217 GGYNQ---AADVWSAGVILY-ILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISAS 272
YN+ +DVW+ GV+L+ I GM P+ G S++++ + D R +
Sbjct: 191 --YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP--EGCPEK 245
Query: 273 ARDLIMGMLRVDPSTRLTAAEV 294
+L+ + +PS R + AE+
Sbjct: 246 VYELMRACWQWNPSDRPSFAEI 267
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 120/262 (45%), Gaps = 25/262 (9%)
Query: 43 VLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPN 102
+ +LG GQ+G + E K +A K++ +D + +V E +M ++ HPN
Sbjct: 16 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPN 70
Query: 103 VVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVS---YCHG 159
+V L V E +++ E G L L + R E A V+ Q+ S Y
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEK 129
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF---YIAPEVLA 216
+HRDL N L+ + +K+ADFGL+ + G G+ F + APE LA
Sbjct: 130 KNFIHRDLAARNCLVG---ENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 185
Query: 217 GGYNQ---AADVWSAGVILY-ILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISAS 272
YN+ +DVW+ GV+L+ I GM P+ G S++++ + D R +
Sbjct: 186 --YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP--EGCPEK 240
Query: 273 ARDLIMGMLRVDPSTRLTAAEV 294
+L+ + +PS R + AE+
Sbjct: 241 VYELMRACWQWNPSDRPSFAEI 262
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 120/262 (45%), Gaps = 25/262 (9%)
Query: 43 VLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPN 102
+ +LG GQ+G + E K +A K++ +D + +V E +M ++ HPN
Sbjct: 20 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPN 74
Query: 103 VVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVS---YCHG 159
+V L V E +++ E G L L + R E A V+ Q+ S Y
Sbjct: 75 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEK 133
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF---YIAPEVLA 216
+HRDL N L+ + +K+ADFGL+ + G G+ F + APE LA
Sbjct: 134 KNFIHRDLAARNCLVG---ENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 189
Query: 217 GGYNQ---AADVWSAGVILY-ILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISAS 272
YN+ +DVW+ GV+L+ I GM P+ G S++++ + D R +
Sbjct: 190 --YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP--EGCPEK 244
Query: 273 ARDLIMGMLRVDPSTRLTAAEV 294
+L+ + +PS R + AE+
Sbjct: 245 VYELMRACWQWNPSDRPSFAEI 266
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 120/262 (45%), Gaps = 25/262 (9%)
Query: 43 VLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPN 102
+ +LG GQ+G + E K +A K++ +D + +V E +M ++ HPN
Sbjct: 21 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPN 75
Query: 103 VVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVS---YCHG 159
+V L V E +++ E G L L + R E A V+ Q+ S Y
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEK 134
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF---YIAPEVLA 216
+HRDL N L+ + +K+ADFGL+ + G G+ F + APE LA
Sbjct: 135 KNFIHRDLAARNCLVG---ENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 190
Query: 217 GGYNQ---AADVWSAGVILY-ILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISAS 272
YN+ +DVW+ GV+L+ I GM P+ G S++++ + D R +
Sbjct: 191 --YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP--EGCPEK 245
Query: 273 ARDLIMGMLRVDPSTRLTAAEV 294
+L+ + +PS R + AE+
Sbjct: 246 VYELMRACWQWNPSDRPSFAEI 267
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 119/259 (45%), Gaps = 21/259 (8%)
Query: 44 LGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNV 103
+ +LG GQ+G + E K +A K++ +D + +V E +M ++ HPN+
Sbjct: 17 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNL 71
Query: 104 VDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVS---YCHGN 160
V L V E +++ E G L L + R E A V+ Q+ S Y
Sbjct: 72 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEKK 130
Query: 161 GVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF---YIAPEVLA- 216
+HRDL N L+ + +K+ADFGL+ + G G+ F + APE LA
Sbjct: 131 NFIHRDLAARNCLVG---ENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAY 186
Query: 217 GGYNQAADVWSAGVILY-ILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARD 275
++ +DVW+ GV+L+ I GM P+ G S++++ + D R + +
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP--EGCPEKVYE 243
Query: 276 LIMGMLRVDPSTRLTAAEV 294
L+ + +PS R + AE+
Sbjct: 244 LMRACWQWNPSDRPSFAEI 262
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 119/264 (45%), Gaps = 33/264 (12%)
Query: 1 MDTNNSEDSSQLSTQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECS 60
+D + ED +Q +F LDAT IS + K +G G+FG + CS
Sbjct: 23 VDPHTFEDPTQTVHEFAKE----------LDATNIS-------IDKVVGAGEFGEV--CS 63
Query: 61 DKFTGEVLACKSIAKDRL---VTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVYEEEDYVH 117
+ S+A L T + R E IM + HPN++ L+ V + V
Sbjct: 64 GRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD-HPNIIRLEGVVTKSKPVM 122
Query: 118 LLMELCAGGELFHRLEKY-GRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLAT 176
++ E G L L K+ +F+ + + R + + Y G VHRDL NIL+
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI-- 180
Query: 177 KSSSSPIKLADFGLATYIK----AGQNLHGTVGSPFYIAPEVLA-GGYNQAADVWSAGVI 231
+S+ K++DFGLA ++ A G + +PE +A + A+DVWS G++
Sbjct: 181 -NSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 232 LYILLS-GMPPFWGKTKSKIFDAV 254
L+ ++S G P+W + + AV
Sbjct: 240 LWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 107/209 (51%), Gaps = 19/209 (9%)
Query: 43 VLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPN 102
+L ++G G FG + + K+ G+V A K I K T E ++ + E+ ++ K + H N
Sbjct: 39 MLSTRIGSGSFGTVYK--GKWHGDV-AVK-ILKVVDPTPEQFQAFRNEVAVLRK-TRHVN 93
Query: 103 VVDLKAVYEEEDYVHLLMELCAGGELFHRLE-KYGRFSETEARVIFRHLMQVVSYCHGNG 161
++ L Y +D + ++ + C G L+ L + +F + I R Q + Y H
Sbjct: 94 IL-LFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKN 152
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKA----GQNLHGTVGSPFYIAPEVLAG 217
++HRD+K NI L +K+ DFGLAT +K+ Q + GS ++APEV+
Sbjct: 153 IIHRDMKSNNIFL---HEGLTVKIGDFGLAT-VKSRWSGSQQVEQPTGSVLWMAPEVIRM 208
Query: 218 GYNQA----ADVWSAGVILYILLSGMPPF 242
N +DV+S G++LY L++G P+
Sbjct: 209 QDNNPFSFQSDVYSYGIVLYELMTGELPY 237
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 43/248 (17%)
Query: 94 MTKLSGHPNVVDLKAVYEEE--DYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLM 151
+ L G PN+V L + ++ L+ E + F L Y ++ + R L+
Sbjct: 79 LQNLXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTD-FKVL--YPTLTDYDIRYYIYELL 135
Query: 152 QVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIA 211
+ + YCH G++HRD+KP N+++ + ++L D+GLA + G+ + V S ++
Sbjct: 136 KALDYCHSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKG 193
Query: 212 PEVLAG--GYNQAADVWSAGVILYILLSGMPPFW-------------------------G 244
PE+L Y+ + D+WS G + ++ PF+
Sbjct: 194 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLN 253
Query: 245 KTKSKIFDAVRAADLRFPSDPW--------DH-ISASARDLIMGMLRVDPSTRLTAAEVL 295
K + ++ + A R PW H +S A D + +LR D RLTA E +
Sbjct: 254 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 313
Query: 296 AHSWMEEC 303
H + ++
Sbjct: 314 THPYFQQV 321
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 43/248 (17%)
Query: 94 MTKLSGHPNVVDLKAVYEEE--DYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLM 151
+ L G PN+V L + ++ L+ E + F L Y ++ + R L+
Sbjct: 79 LQNLXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTD-FKVL--YPTLTDYDIRYYIYELL 135
Query: 152 QVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIA 211
+ + YCH G++HRD+KP N+++ + ++L D+GLA + G+ + V S ++
Sbjct: 136 KALDYCHSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKG 193
Query: 212 PEVLAG--GYNQAADVWSAGVILYILLSGMPPFW-------------------------G 244
PE+L Y+ + D+WS G + ++ PF+
Sbjct: 194 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLN 253
Query: 245 KTKSKIFDAVRAADLRFPSDPW--------DH-ISASARDLIMGMLRVDPSTRLTAAEVL 295
K + ++ + A R PW H +S A D + +LR D RLTA E +
Sbjct: 254 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 313
Query: 296 AHSWMEEC 303
H + ++
Sbjct: 314 THPYFQQV 321
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 43/248 (17%)
Query: 94 MTKLSGHPNVVDLKAVYEEE--DYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLM 151
+ L G PN+V L + ++ L+ E + F L Y ++ + R L+
Sbjct: 79 LQNLXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTD-FKVL--YPTLTDYDIRYYIYELL 135
Query: 152 QVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIA 211
+ + YCH G++HRD+KP N+++ + ++L D+GLA + G+ + V S ++
Sbjct: 136 KALDYCHSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKG 193
Query: 212 PEVLAG--GYNQAADVWSAGVILYILLSGMPPFW-------------------------G 244
PE+L Y+ + D+WS G + ++ PF+
Sbjct: 194 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLN 253
Query: 245 KTKSKIFDAVRAADLRFPSDPW--------DH-ISASARDLIMGMLRVDPSTRLTAAEVL 295
K + ++ + A R PW H +S A D + +LR D RLTA E +
Sbjct: 254 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 313
Query: 296 AHSWMEEC 303
H + ++
Sbjct: 314 THPYFQQV 321
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 43/248 (17%)
Query: 94 MTKLSGHPNVVDLKAVYEEE--DYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLM 151
+ L G PN+V L + ++ L+ E + F L Y ++ + R L+
Sbjct: 80 LQNLXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTD-FKVL--YPTLTDYDIRYYIYELL 136
Query: 152 QVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIA 211
+ + YCH G++HRD+KP N+++ + ++L D+GLA + G+ + V S ++
Sbjct: 137 KALDYCHSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKG 194
Query: 212 PEVLAG--GYNQAADVWSAGVILYILLSGMPPFW-------------------------G 244
PE+L Y+ + D+WS G + ++ PF+
Sbjct: 195 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLN 254
Query: 245 KTKSKIFDAVRAADLRFPSDPW--------DH-ISASARDLIMGMLRVDPSTRLTAAEVL 295
K + ++ + A R PW H +S A D + +LR D RLTA E +
Sbjct: 255 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 314
Query: 296 AHSWMEEC 303
H + ++
Sbjct: 315 THPYFQQV 322
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 117/328 (35%), Gaps = 72/328 (21%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKL 97
L +RY + LG G FG + EC D G+ I ++ E R LEI ++ K+
Sbjct: 49 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAAR---LEINVLKKI 105
Query: 98 SGHPNVVDLKAVYEEEDYVHLLMELCAGGEL-------FHRLEKYGRFSETEARVIFRHL 150
V D+ + +C EL F + + + R + L
Sbjct: 106 KEKDKENKFLCVLMS-DWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQL 164
Query: 151 MQVVSYCHGNGVVHRDLKPENILLATKS----------------SSSPIKLADFGLATYI 194
+ + H N + H DLKPENIL ++ I++ADFG AT+
Sbjct: 165 CHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF- 223
Query: 195 KAGQNLHGT-VGSPFYIAPEV-LAGGYNQAADVWSAGVILYILLSG-------------- 238
H T V + Y PEV L G+ Q DVWS G IL+ G
Sbjct: 224 --DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLV 281
Query: 239 -MPPFWGKTKSKIFDAVRAADLRFPSD-PWDHISASAR---------------------- 274
M G S + R + WD S+ R
Sbjct: 282 MMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQ 341
Query: 275 --DLIMGMLRVDPSTRLTAAEVLAHSWM 300
DL+ ML DP+ R+T AE L H +
Sbjct: 342 LFDLMRRMLEFDPAQRITLAEALLHPFF 369
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 105/208 (50%), Gaps = 17/208 (8%)
Query: 43 VLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPN 102
+G+++G G FG + + K+ G+V A K + T + +++ K E+ ++ K + H N
Sbjct: 27 TVGQRIGSGSFGTVYK--GKWHGDV-AVKMLNVT-APTPQQLQAFKNEVGVLRK-TRHVN 81
Query: 103 VVDLKAVYEEEDYVHLLMELCAGGELFHRLE-KYGRFSETEARVIFRHLMQVVSYCHGNG 161
++ L Y + ++ + C G L+H L +F + I R + + Y H
Sbjct: 82 IL-LFMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS 140
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLAT---YIKAGQNLHGTVGSPFYIAPEVL--- 215
++HRDLK NI L ++ +K+ DFGLAT GS ++APEV+
Sbjct: 141 IIHRDLKSNNIFLHEDNT---VKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 197
Query: 216 -AGGYNQAADVWSAGVILYILLSGMPPF 242
+ Y+ +DV++ G++LY L++G P+
Sbjct: 198 DSNPYSFQSDVYAFGIVLYELMTGQLPY 225
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 117/328 (35%), Gaps = 72/328 (21%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKL 97
L +RY + LG G FG + EC D G+ I ++ E R LEI ++ K+
Sbjct: 26 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAAR---LEINVLKKI 82
Query: 98 SGHPNVVDLKAVYEEEDYVHLLMELCAGGEL-------FHRLEKYGRFSETEARVIFRHL 150
V D+ + +C EL F + + + R + L
Sbjct: 83 KEKDKENKFLCVLMS-DWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQL 141
Query: 151 MQVVSYCHGNGVVHRDLKPENILLATKS----------------SSSPIKLADFGLATYI 194
+ + H N + H DLKPENIL ++ I++ADFG AT+
Sbjct: 142 CHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF- 200
Query: 195 KAGQNLHGT-VGSPFYIAPEV-LAGGYNQAADVWSAGVILYILLSG-------------- 238
H T V + Y PEV L G+ Q DVWS G IL+ G
Sbjct: 201 --DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLV 258
Query: 239 -MPPFWGKTKSKIFDAVRAADLRFPSD-PWDHISASAR---------------------- 274
M G S + R + WD S+ R
Sbjct: 259 MMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQ 318
Query: 275 --DLIMGMLRVDPSTRLTAAEVLAHSWM 300
DL+ ML DP+ R+T AE L H +
Sbjct: 319 LFDLMRRMLEFDPAQRITLAEALLHPFF 346
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 43/248 (17%)
Query: 94 MTKLSGHPNVVDLKAVYEEE--DYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLM 151
+ L G PN+V L + ++ L+ E + F L Y ++ + R L+
Sbjct: 79 LQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTD-FKVL--YPTLTDYDIRYYIYELL 135
Query: 152 QVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIA 211
+ + YCH G++HRD+KP N+++ + ++L D+GLA + G+ + V S ++
Sbjct: 136 KALDYCHSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKG 193
Query: 212 PEVLAG--GYNQAADVWSAGVILYILLSGMPPFW-------------------------G 244
PE+L Y+ + D+WS G + ++ PF+
Sbjct: 194 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLN 253
Query: 245 KTKSKIFDAVRAADLRFPSDPW--------DH-ISASARDLIMGMLRVDPSTRLTAAEVL 295
K + ++ + A R PW H +S A D + +LR D RLTA E +
Sbjct: 254 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 313
Query: 296 AHSWMEEC 303
H + ++
Sbjct: 314 THPYFQQV 321
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 104/225 (46%), Gaps = 33/225 (14%)
Query: 31 DATQISNLSDRYVLGKQLGWGQFGVIRECS----DKFTGEVLACKSIAKDRLVTVEDVRS 86
D TQ +++ +QLG G FG + C TGEV+A K + T E +R
Sbjct: 6 DPTQFEERHLKFL--RQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRD 60
Query: 87 IKLEIEIMTKLSGHPNVVDLKAV-YEE-EDYVHLLMELCAGGELFHRLEKYGRFSETEAR 144
+ EIEI+ L H N+V K V Y + L+ME G L L+K+ + R
Sbjct: 61 FEREIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKH------KER 113
Query: 145 VIFRHLMQVVS-------YCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYI--- 194
+ L+Q S Y +HRDL NIL+ ++ +K+ DFGL +
Sbjct: 114 IDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQD 170
Query: 195 KAGQNLHGTVGSP-FYIAPEVLA-GGYNQAADVWSAGVILYILLS 237
K + SP F+ APE L ++ A+DVWS GV+LY L +
Sbjct: 171 KEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 117/328 (35%), Gaps = 72/328 (21%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKL 97
L +RY + LG G FG + EC D G+ I ++ E R LEI ++ K+
Sbjct: 17 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAAR---LEINVLKKI 73
Query: 98 SGHPNVVDLKAVYEEEDYVHLLMELCAGGEL-------FHRLEKYGRFSETEARVIFRHL 150
V D+ + +C EL F + + + R + L
Sbjct: 74 KEKDKENKFLCVLMS-DWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQL 132
Query: 151 MQVVSYCHGNGVVHRDLKPENILLATKS----------------SSSPIKLADFGLATYI 194
+ + H N + H DLKPENIL ++ I++ADFG AT+
Sbjct: 133 CHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF- 191
Query: 195 KAGQNLHGT-VGSPFYIAPEV-LAGGYNQAADVWSAGVILYILLSG-------------- 238
H T V + Y PEV L G+ Q DVWS G IL+ G
Sbjct: 192 --DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLV 249
Query: 239 -MPPFWGKTKSKIFDAVRAADLRFPSD-PWDHISASAR---------------------- 274
M G S + R + WD S+ R
Sbjct: 250 MMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQ 309
Query: 275 --DLIMGMLRVDPSTRLTAAEVLAHSWM 300
DL+ ML DP+ R+T AE L H +
Sbjct: 310 LFDLMRRMLEFDPAQRITLAEALLHPFF 337
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 43/248 (17%)
Query: 94 MTKLSGHPNVVDLKAVYEEE--DYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLM 151
+ L G PN+V L + ++ L+ E + F L Y ++ + R L+
Sbjct: 80 LQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTD-FKVL--YPTLTDYDIRYYIYELL 136
Query: 152 QVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIA 211
+ + YCH G++HRD+KP N+++ + ++L D+GLA + G+ + V S ++
Sbjct: 137 KALDYCHSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKG 194
Query: 212 PEVLAG--GYNQAADVWSAGVILYILLSGMPPFW-------------------------G 244
PE+L Y+ + D+WS G + ++ PF+
Sbjct: 195 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLN 254
Query: 245 KTKSKIFDAVRAADLRFPSDPW--------DH-ISASARDLIMGMLRVDPSTRLTAAEVL 295
K + ++ + A R PW H +S A D + +LR D RLTA E +
Sbjct: 255 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 314
Query: 296 AHSWMEEC 303
H + ++
Sbjct: 315 THPYFQQV 322
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 43/248 (17%)
Query: 94 MTKLSGHPNVVDLKAVYEEE--DYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLM 151
+ L G PN+V L + ++ L+ E + F L Y ++ + R L+
Sbjct: 79 LQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTD-FKVL--YPTLTDYDIRYYIYELL 135
Query: 152 QVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIA 211
+ + YCH G++HRD+KP N+++ + ++L D+GLA + G+ + V S ++
Sbjct: 136 KALDYCHSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKG 193
Query: 212 PEVLAG--GYNQAADVWSAGVILYILLSGMPPFW-------------------------G 244
PE+L Y+ + D+WS G + ++ PF+
Sbjct: 194 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLN 253
Query: 245 KTKSKIFDAVRAADLRFPSDPW--------DH-ISASARDLIMGMLRVDPSTRLTAAEVL 295
K + ++ + A R PW H +S A D + +LR D RLTA E +
Sbjct: 254 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 313
Query: 296 AHSWMEEC 303
H + ++
Sbjct: 314 THPYFQQV 321
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 43/248 (17%)
Query: 94 MTKLSGHPNVVDLKAVYEEE--DYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLM 151
+ L G PN+V L + ++ L+ E + F L Y ++ + R L+
Sbjct: 81 LQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTD-FKVL--YPTLTDYDIRYYIYELL 137
Query: 152 QVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIA 211
+ + YCH G++HRD+KP N+++ + ++L D+GLA + G+ + V S ++
Sbjct: 138 KALDYCHSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKG 195
Query: 212 PEVLAG--GYNQAADVWSAGVILYILLSGMPPFW-------------------------G 244
PE+L Y+ + D+WS G + ++ PF+
Sbjct: 196 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLN 255
Query: 245 KTKSKIFDAVRAADLRFPSDPW--------DH-ISASARDLIMGMLRVDPSTRLTAAEVL 295
K + ++ + A R PW H +S A D + +LR D RLTA E +
Sbjct: 256 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 315
Query: 296 AHSWMEEC 303
H + ++
Sbjct: 316 THPYFQQV 323
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 43/248 (17%)
Query: 94 MTKLSGHPNVVDLKAVYEEE--DYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLM 151
+ L G PN+V L + ++ L+ E + F L Y ++ + R L+
Sbjct: 79 LQNLMGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTD-FKVL--YPTLTDYDIRYYIYELL 135
Query: 152 QVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIA 211
+ + YCH G++HRD+KP N+++ + ++L D+GLA + G+ + V S ++
Sbjct: 136 KALDYCHSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKG 193
Query: 212 PEVLAG--GYNQAADVWSAGVILYILLSGMPPFW-------------------------G 244
PE+L Y+ + D+WS G + ++ PF+
Sbjct: 194 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLN 253
Query: 245 KTKSKIFDAVRAADLRFPSDPW--------DH-ISASARDLIMGMLRVDPSTRLTAAEVL 295
K + ++ + A R PW H +S A D + +LR D RLTA E +
Sbjct: 254 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 313
Query: 296 AHSWMEEC 303
H + ++
Sbjct: 314 THPYFQQV 321
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 105/208 (50%), Gaps = 17/208 (8%)
Query: 43 VLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPN 102
+G+++G G FG + + K+ G+V A K + T + +++ K E+ ++ K + H N
Sbjct: 38 TVGQRIGSGSFGTVYK--GKWHGDV-AVKMLNVT-APTPQQLQAFKNEVGVLRK-TRHVN 92
Query: 103 VVDLKAVYEEEDYVHLLMELCAGGELFHRLEKY-GRFSETEARVIFRHLMQVVSYCHGNG 161
++ L Y + + ++ + C G L+H L +F + I R Q + Y H
Sbjct: 93 IL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 151
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLH---GTVGSPFYIAPEVL--- 215
++HRDLK NI L + +K+ DFGLAT H GS ++APEV+
Sbjct: 152 IIHRDLKSNNIFLHEDLT---VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 208
Query: 216 -AGGYNQAADVWSAGVILYILLSGMPPF 242
Y+ +DV++ G++LY L++G P+
Sbjct: 209 DKNPYSFQSDVYAFGIVLYELMTGQLPY 236
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 104/207 (50%), Gaps = 17/207 (8%)
Query: 44 LGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNV 103
+G+++G G FG + + K+ G+V A K + T + +++ K E+ ++ K + H N+
Sbjct: 17 VGQRIGSGSFGTVYK--GKWHGDV-AVKMLNVT-APTPQQLQAFKNEVGVLRK-TRHVNI 71
Query: 104 VDLKAVYEEEDYVHLLMELCAGGELFHRLEKY-GRFSETEARVIFRHLMQVVSYCHGNGV 162
+ L Y + + ++ + C G L+H L +F + I R Q + Y H +
Sbjct: 72 L-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 130
Query: 163 VHRDLKPENILLATKSSSSPIKLADFGLATY---IKAGQNLHGTVGSPFYIAPEVL---- 215
+HRDLK NI L + +K+ DFGLAT GS ++APEV+
Sbjct: 131 IHRDLKSNNIFLHEDLT---VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 187
Query: 216 AGGYNQAADVWSAGVILYILLSGMPPF 242
Y+ +DV++ G++LY L++G P+
Sbjct: 188 KNPYSFQSDVYAFGIVLYELMTGQLPY 214
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 104/207 (50%), Gaps = 17/207 (8%)
Query: 44 LGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNV 103
+G+++G G FG + + K+ G+V A K + T + +++ K E+ ++ K + H N+
Sbjct: 17 VGQRIGSGSFGTVYK--GKWHGDV-AVKML-NVTAPTPQQLQAFKNEVGVLRK-TRHVNI 71
Query: 104 VDLKAVYEEEDYVHLLMELCAGGELFHRLEKY-GRFSETEARVIFRHLMQVVSYCHGNGV 162
+ L Y + + ++ + C G L+H L +F + I R Q + Y H +
Sbjct: 72 L-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 130
Query: 163 VHRDLKPENILLATKSSSSPIKLADFGLATY---IKAGQNLHGTVGSPFYIAPEVL---- 215
+HRDLK NI L + +K+ DFGLAT GS ++APEV+
Sbjct: 131 IHRDLKSNNIFLHEDLT---VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 187
Query: 216 AGGYNQAADVWSAGVILYILLSGMPPF 242
Y+ +DV++ G++LY L++G P+
Sbjct: 188 KNPYSFQSDVYAFGIVLYELMTGQLPY 214
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 104/207 (50%), Gaps = 17/207 (8%)
Query: 44 LGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNV 103
+G+++G G FG + + K+ G+V A K + T + +++ K E+ ++ K + H N+
Sbjct: 14 VGQRIGSGSFGTVYK--GKWHGDV-AVKMLNVT-APTPQQLQAFKNEVGVLRK-TRHVNI 68
Query: 104 VDLKAVYEEEDYVHLLMELCAGGELFHRLEKY-GRFSETEARVIFRHLMQVVSYCHGNGV 162
+ L Y + + ++ + C G L+H L +F + I R Q + Y H +
Sbjct: 69 L-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 127
Query: 163 VHRDLKPENILLATKSSSSPIKLADFGLATY---IKAGQNLHGTVGSPFYIAPEVL---- 215
+HRDLK NI L + +K+ DFGLAT GS ++APEV+
Sbjct: 128 IHRDLKSNNIFLHEDLT---VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 184
Query: 216 AGGYNQAADVWSAGVILYILLSGMPPF 242
Y+ +DV++ G++LY L++G P+
Sbjct: 185 KNPYSFQSDVYAFGIVLYELMTGQLPY 211
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 104/208 (50%), Gaps = 17/208 (8%)
Query: 43 VLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPN 102
+G+++G G FG + + K+ G+V A K + T + +++ K E+ ++ K + H N
Sbjct: 31 TVGQRIGSGSFGTVYK--GKWHGDV-AVKMLNVT-APTPQQLQAFKNEVGVLRK-TRHVN 85
Query: 103 VVDLKAVYEEEDYVHLLMELCAGGELFHRLEKY-GRFSETEARVIFRHLMQVVSYCHGNG 161
++ L Y + + ++ + C G L+H L +F + I R Q + Y H
Sbjct: 86 IL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 144
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLAT---YIKAGQNLHGTVGSPFYIAPEVL--- 215
++HRDLK NI L + +K+ DFGLAT GS ++APEV+
Sbjct: 145 IIHRDLKSNNIFLHEDLT---VKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 201
Query: 216 -AGGYNQAADVWSAGVILYILLSGMPPF 242
Y+ +DV++ G++LY L++G P+
Sbjct: 202 DKNPYSFQSDVYAFGIVLYELMTGQLPY 229
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 104/208 (50%), Gaps = 17/208 (8%)
Query: 43 VLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPN 102
+G+++G G FG + + K+ G+V A K + T + +++ K E+ ++ K + H N
Sbjct: 39 TVGQRIGSGSFGTVYKG--KWHGDV-AVKMLNVT-APTPQQLQAFKNEVGVLRK-TRHVN 93
Query: 103 VVDLKAVYEEEDYVHLLMELCAGGELFHRLEKY-GRFSETEARVIFRHLMQVVSYCHGNG 161
++ L Y + + ++ + C G L+H L +F + I R Q + Y H
Sbjct: 94 IL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 152
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLAT---YIKAGQNLHGTVGSPFYIAPEVL--- 215
++HRDLK NI L + +K+ DFGLAT GS ++APEV+
Sbjct: 153 IIHRDLKSNNIFLHEDLT---VKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 209
Query: 216 -AGGYNQAADVWSAGVILYILLSGMPPF 242
Y+ +DV++ G++LY L++G P+
Sbjct: 210 DKNPYSFQSDVYAFGIVLYELMTGQLPY 237
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 104/208 (50%), Gaps = 17/208 (8%)
Query: 43 VLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPN 102
+G+++G G FG + + K+ G+V A K + T + +++ K E+ ++ K + H N
Sbjct: 39 TVGQRIGSGSFGTVYK--GKWHGDV-AVKMLNVT-APTPQQLQAFKNEVGVLRK-TRHVN 93
Query: 103 VVDLKAVYEEEDYVHLLMELCAGGELFHRLEKY-GRFSETEARVIFRHLMQVVSYCHGNG 161
++ L Y + + ++ + C G L+H L +F + I R Q + Y H
Sbjct: 94 IL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 152
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATY---IKAGQNLHGTVGSPFYIAPEVL--- 215
++HRDLK NI L + +K+ DFGLAT GS ++APEV+
Sbjct: 153 IIHRDLKSNNIFLHEDLT---VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ 209
Query: 216 -AGGYNQAADVWSAGVILYILLSGMPPF 242
Y+ +DV++ G++LY L++G P+
Sbjct: 210 DKNPYSFQSDVYAFGIVLYELMTGQLPY 237
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 106/248 (42%), Gaps = 43/248 (17%)
Query: 94 MTKLSGHPNVVDLKAVYEEE--DYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLM 151
+ L G PN+V L + ++ L+ E + F L Y ++ + R L+
Sbjct: 100 LQNLXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTD-FKVL--YPTLTDYDIRYYIYELL 156
Query: 152 QVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIA 211
+ + YCH G++HRD+KP N+++ + ++L D+GLA + G+ + V S ++
Sbjct: 157 KALDYCHSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKG 214
Query: 212 PEVLAG--GYNQAADVWSAGVILYILLSGMPPFW-------------------------G 244
PE+L Y+ + D+WS G + ++ PF+
Sbjct: 215 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNAYLN 274
Query: 245 KTKSKIFDAVRAADLRFPSDPW--------DH-ISASARDLIMGMLRVDPSTRLTAAEVL 295
K + ++ + A R PW H +S A D + +LR D RLTA E +
Sbjct: 275 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 334
Query: 296 AHSWMEEC 303
H + ++
Sbjct: 335 THPYFQQV 342
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 119/264 (45%), Gaps = 33/264 (12%)
Query: 1 MDTNNSEDSSQLSTQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECS 60
+D + ED +Q +F LDAT IS + K +G G+FG + CS
Sbjct: 23 VDPHTFEDPTQTVHEFAKE----------LDATNIS-------IDKVVGAGEFGEV--CS 63
Query: 61 DKFTGEVLACKSIAKDRL---VTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVYEEEDYVH 117
+ S+A L T + R E IM + HPN++ L+ V + V
Sbjct: 64 GRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD-HPNIIRLEGVVTKSKPVM 122
Query: 118 LLMELCAGGELFHRLEKY-GRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLAT 176
++ E G L L K+ +F+ + + R + + Y G VHRDL NIL+
Sbjct: 123 IVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGAVHRDLAARNILI-- 180
Query: 177 KSSSSPIKLADFGLATYIK----AGQNLHGTVGSPFYIAPEVLA-GGYNQAADVWSAGVI 231
+S+ K++DFGL+ ++ A G + +PE +A + A+DVWS G++
Sbjct: 181 -NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 232 LYILLS-GMPPFWGKTKSKIFDAV 254
L+ ++S G P+W + + AV
Sbjct: 240 LWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 133/302 (44%), Gaps = 53/302 (17%)
Query: 39 SDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLS 98
D Y L ++LG G++ + E + E +A K + + + K EI+I+ L
Sbjct: 36 QDDYQLVRKLGRGKYSEVFEAINITNNEKVAVKILKPVKKKKI------KREIKILENLR 89
Query: 99 GHPNVVDLKAVYEE--EDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSY 156
G PN++ L + ++ L+ E + F +L Y ++ + R +++ + Y
Sbjct: 90 GGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQL--YQTLTDYDIRFYMYEILKALDY 146
Query: 157 CHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLA 216
CH G++HRD+KP N+L+ + ++L D+GLA + GQ + V S ++ PE+L
Sbjct: 147 CHSMGIMHRDVKPHNVLIDHEHRK--LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLV 204
Query: 217 GG--YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDA-VRAADLRFPSDPWDHI---- 269
Y+ + D+WS G +L ++ PF+ + +D VR A + D +D+I
Sbjct: 205 DYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN--YDQLVRIAKVLGTEDLYDYIDKYN 262
Query: 270 -------------------------------SASARDLIMGMLRVDPSTRLTAAEVLAHS 298
S A D + +LR D +RLTA E + H
Sbjct: 263 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 322
Query: 299 WM 300
+
Sbjct: 323 YF 324
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 119/264 (45%), Gaps = 33/264 (12%)
Query: 1 MDTNNSEDSSQLSTQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECS 60
+D + ED +Q +F LDAT IS + K +G G+FG + CS
Sbjct: 21 VDPHTYEDPTQTVHEFAKE----------LDATNIS-------IDKVVGAGEFGEV--CS 61
Query: 61 DKFTGEVLACKSIAKDRL---VTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVYEEEDYVH 117
+ S+A L T + R E IM + HPN++ L+ V + V
Sbjct: 62 GRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD-HPNIIRLEGVVTKSKPVM 120
Query: 118 LLMELCAGGELFHRLEKY-GRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLAT 176
++ E G L L K+ +F+ + + R + + Y G VHRDL NIL+
Sbjct: 121 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI-- 178
Query: 177 KSSSSPIKLADFGLATYIK----AGQNLHGTVGSPFYIAPEVLA-GGYNQAADVWSAGVI 231
+S+ K++DFGL+ ++ A G + +PE +A + A+DVWS G++
Sbjct: 179 -NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 237
Query: 232 LYILLS-GMPPFWGKTKSKIFDAV 254
L+ ++S G P+W + + AV
Sbjct: 238 LWEVMSYGERPYWEMSNQDVIKAV 261
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 104/207 (50%), Gaps = 17/207 (8%)
Query: 44 LGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNV 103
+G+++G G FG + + K+ G+V A K + T + +++ K E+ ++ K + H N+
Sbjct: 12 VGQRIGSGSFGTVYK--GKWHGDV-AVKMLNVTA-PTPQQLQAFKNEVGVLRK-TRHVNI 66
Query: 104 VDLKAVYEEEDYVHLLMELCAGGELFHRLEKY-GRFSETEARVIFRHLMQVVSYCHGNGV 162
+ L Y + + ++ + C G L+H L +F + I R Q + Y H +
Sbjct: 67 L-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 125
Query: 163 VHRDLKPENILLATKSSSSPIKLADFGLATY---IKAGQNLHGTVGSPFYIAPEVL---- 215
+HRDLK NI L + +K+ DFGLAT GS ++APEV+
Sbjct: 126 IHRDLKSNNIFLHEDLT---VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 216 AGGYNQAADVWSAGVILYILLSGMPPF 242
Y+ +DV++ G++LY L++G P+
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 119/264 (45%), Gaps = 33/264 (12%)
Query: 1 MDTNNSEDSSQLSTQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECS 60
+D + ED +Q +F LDAT IS + K +G G+FG + CS
Sbjct: 23 VDPHTYEDPTQTVHEFAKE----------LDATNIS-------IDKVVGAGEFGEV--CS 63
Query: 61 DKFTGEVLACKSIAKDRL---VTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVYEEEDYVH 117
+ S+A L T + R E IM + HPN++ L+ V + V
Sbjct: 64 GRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD-HPNIIRLEGVVTKSKPVM 122
Query: 118 LLMELCAGGELFHRLEKY-GRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLAT 176
++ E G L L K+ +F+ + + R + + Y G VHRDL NIL+
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI-- 180
Query: 177 KSSSSPIKLADFGLATYIK----AGQNLHGTVGSPFYIAPEVLA-GGYNQAADVWSAGVI 231
+S+ K++DFGL+ ++ A G + +PE +A + A+DVWS G++
Sbjct: 181 -NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 232 LYILLS-GMPPFWGKTKSKIFDAV 254
L+ ++S G P+W + + AV
Sbjct: 240 LWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 119/264 (45%), Gaps = 33/264 (12%)
Query: 1 MDTNNSEDSSQLSTQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECS 60
+D + ED +Q +F LDAT IS + K +G G+FG + CS
Sbjct: 23 VDPHTYEDPTQTVHEFAKE----------LDATNIS-------IDKVVGAGEFGEV--CS 63
Query: 61 DKFTGEVLACKSIAKDRL---VTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVYEEEDYVH 117
+ S+A L T + R E IM + HPN++ L+ V + V
Sbjct: 64 GRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD-HPNIIRLEGVVTKSKPVM 122
Query: 118 LLMELCAGGELFHRLEKY-GRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLAT 176
++ E G L L K+ +F+ + + R + + Y G VHRDL NIL+
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI-- 180
Query: 177 KSSSSPIKLADFGLATYIK----AGQNLHGTVGSPFYIAPEVLA-GGYNQAADVWSAGVI 231
+S+ K++DFGL+ ++ A G + +PE +A + A+DVWS G++
Sbjct: 181 -NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 232 LYILLS-GMPPFWGKTKSKIFDAV 254
L+ ++S G P+W + + AV
Sbjct: 240 LWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 119/264 (45%), Gaps = 33/264 (12%)
Query: 1 MDTNNSEDSSQLSTQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECS 60
+D + ED +Q +F LDAT IS + K +G G+FG + CS
Sbjct: 23 VDPHTFEDPTQTVHEFAKE----------LDATNIS-------IDKVVGAGEFGEV--CS 63
Query: 61 DKFTGEVLACKSIAKDRL---VTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVYEEEDYVH 117
+ S+A L T + R E IM + HPN++ L+ V + V
Sbjct: 64 GRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD-HPNIIRLEGVVTKSKPVM 122
Query: 118 LLMELCAGGELFHRLEKY-GRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLAT 176
++ E G L L K+ +F+ + + R + + Y G VHRDL NIL+
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILI-- 180
Query: 177 KSSSSPIKLADFGLATYIK----AGQNLHGTVGSPFYIAPEVLA-GGYNQAADVWSAGVI 231
+S+ K++DFGL+ ++ A G + +PE +A + A+DVWS G++
Sbjct: 181 -NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 232 LYILLS-GMPPFWGKTKSKIFDAV 254
L+ ++S G P+W + + AV
Sbjct: 240 LWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 104/207 (50%), Gaps = 17/207 (8%)
Query: 44 LGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNV 103
+G+++G G FG + + K+ G+V A K + T + +++ K E+ ++ K + H N+
Sbjct: 12 VGQRIGSGSFGTVYK--GKWHGDV-AVKMLNVT-APTPQQLQAFKNEVGVLRK-TRHVNI 66
Query: 104 VDLKAVYEEEDYVHLLMELCAGGELFHRLEKY-GRFSETEARVIFRHLMQVVSYCHGNGV 162
+ L Y + + ++ + C G L+H L +F + I R Q + Y H +
Sbjct: 67 L-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 125
Query: 163 VHRDLKPENILLATKSSSSPIKLADFGLAT---YIKAGQNLHGTVGSPFYIAPEVL---- 215
+HRDLK NI L + +K+ DFGLAT GS ++APEV+
Sbjct: 126 IHRDLKSNNIFLHEDLT---VKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 216 AGGYNQAADVWSAGVILYILLSGMPPF 242
Y+ +DV++ G++LY L++G P+
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 119/264 (45%), Gaps = 33/264 (12%)
Query: 1 MDTNNSEDSSQLSTQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECS 60
+D + ED +Q +F LDAT IS + K +G G+FG + CS
Sbjct: 23 VDPHTYEDPTQTVHEFAKE----------LDATNIS-------IDKVVGAGEFGEV--CS 63
Query: 61 DKFTGEVLACKSIAKDRL---VTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVYEEEDYVH 117
+ S+A L T + R E IM + HPN++ L+ V + V
Sbjct: 64 GRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD-HPNIIRLEGVVTKSKPVM 122
Query: 118 LLMELCAGGELFHRLEKY-GRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLAT 176
++ E G L L K+ +F+ + + R + + Y G VHRDL NIL+
Sbjct: 123 IVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI-- 180
Query: 177 KSSSSPIKLADFGLATYIK----AGQNLHGTVGSPFYIAPEVLA-GGYNQAADVWSAGVI 231
+S+ K++DFGL+ ++ A G + +PE +A + A+DVWS G++
Sbjct: 181 -NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 232 LYILLS-GMPPFWGKTKSKIFDAV 254
L+ ++S G P+W + + AV
Sbjct: 240 LWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 119/264 (45%), Gaps = 33/264 (12%)
Query: 1 MDTNNSEDSSQLSTQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECS 60
+D + ED +Q +F LDAT IS + K +G G+FG + CS
Sbjct: 23 VDPHTFEDPTQTVHEFAKE----------LDATNIS-------IDKVVGAGEFGEV--CS 63
Query: 61 DKFTGEVLACKSIAKDRL---VTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVYEEEDYVH 117
+ S+A L T + R E IM + HPN++ L+ V + V
Sbjct: 64 GRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD-HPNIIRLEGVVTKSKPVM 122
Query: 118 LLMELCAGGELFHRLEKY-GRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLAT 176
++ E G L L K+ +F+ + + R + + Y G VHRDL NIL+
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI-- 180
Query: 177 KSSSSPIKLADFGLATYIK----AGQNLHGTVGSPFYIAPEVLA-GGYNQAADVWSAGVI 231
+S+ K++DFGL+ ++ A G + +PE +A + A+DVWS G++
Sbjct: 181 -NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 232 LYILLS-GMPPFWGKTKSKIFDAV 254
L+ ++S G P+W + + AV
Sbjct: 240 LWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 119/264 (45%), Gaps = 33/264 (12%)
Query: 1 MDTNNSEDSSQLSTQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECS 60
+D + ED +Q +F LDAT IS + K +G G+FG + CS
Sbjct: 23 VDPHTFEDPTQTVHEFAKE----------LDATNIS-------IDKVVGAGEFGEV--CS 63
Query: 61 DKFTGEVLACKSIAKDRL---VTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVYEEEDYVH 117
+ S+A L T + R E IM + HPN++ L+ V + V
Sbjct: 64 GRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD-HPNIIRLEGVVTKSKPVM 122
Query: 118 LLMELCAGGELFHRLEKY-GRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLAT 176
++ E G L L K+ +F+ + + R + + Y G VHRDL NIL+
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI-- 180
Query: 177 KSSSSPIKLADFGLATYIK----AGQNLHGTVGSPFYIAPEVLA-GGYNQAADVWSAGVI 231
+S+ K++DFGL+ ++ A G + +PE +A + A+DVWS G++
Sbjct: 181 -NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 232 LYILLS-GMPPFWGKTKSKIFDAV 254
L+ ++S G P+W + + AV
Sbjct: 240 LWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 119/261 (45%), Gaps = 18/261 (6%)
Query: 43 VLGKQLGWGQFGVIRE-CSDKFTGEVL--ACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
VL + LG G FG + E GE + A K+ KD T+++ E IM L
Sbjct: 15 VLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKD--CTLDNKEKFMSEAVIMKNLD- 71
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR-HLMQVVSYCH 158
HP++V L + EEE ++MEL GEL H LE+ + V++ + + ++Y
Sbjct: 72 HPHIVKLIGIIEEEP-TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE 130
Query: 159 GNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGS-PF-YIAPEVLA 216
VHRD+ NIL+A S +KL DFGL+ YI+ +V P +++PE +
Sbjct: 131 SINCVHRDIAVRNILVA---SPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESIN 187
Query: 217 -GGYNQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASAR 274
+ A+DVW V ++ +LS G PF+ + + D R P D
Sbjct: 188 FRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGD-RLPKP--DLCPPVLY 244
Query: 275 DLIMGMLRVDPSTRLTAAEVL 295
L+ DPS R E++
Sbjct: 245 TLMTRCWDYDPSDRPRFTELV 265
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 119/261 (45%), Gaps = 18/261 (6%)
Query: 43 VLGKQLGWGQFGVIRE-CSDKFTGEVL--ACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
VL + LG G FG + E GE + A K+ KD T+++ E IM L
Sbjct: 27 VLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKD--CTLDNKEKFMSEAVIMKNLD- 83
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR-HLMQVVSYCH 158
HP++V L + EEE ++MEL GEL H LE+ + V++ + + ++Y
Sbjct: 84 HPHIVKLIGIIEEEP-TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE 142
Query: 159 GNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGS-PF-YIAPEVLA 216
VHRD+ NIL+A S +KL DFGL+ YI+ +V P +++PE +
Sbjct: 143 SINCVHRDIAVRNILVA---SPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESIN 199
Query: 217 -GGYNQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASAR 274
+ A+DVW V ++ +LS G PF+ + + D R P D
Sbjct: 200 FRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGD-RLPKP--DLCPPVLY 256
Query: 275 DLIMGMLRVDPSTRLTAAEVL 295
L+ DPS R E++
Sbjct: 257 TLMTRCWDYDPSDRPRFTELV 277
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 118/264 (44%), Gaps = 33/264 (12%)
Query: 1 MDTNNSEDSSQLSTQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECS 60
+D + ED +Q +F LDAT IS + K +G G+FG + CS
Sbjct: 23 VDPHTFEDPTQTVHEFAKE----------LDATNIS-------IDKVVGAGEFGEV--CS 63
Query: 61 DKFTGEVLACKSIAKDRL---VTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVYEEEDYVH 117
+ S+A L T + R E IM + HPN++ L+ V + V
Sbjct: 64 GRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD-HPNIIRLEGVVTKSKPVM 122
Query: 118 LLMELCAGGELFHRLEKY-GRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLAT 176
++ E G L L K+ +F+ + + R + + Y G VHRDL NIL+
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI-- 180
Query: 177 KSSSSPIKLADFGLATYIK----AGQNLHGTVGSPFYIAPEVLA-GGYNQAADVWSAGVI 231
+S+ K++DFGL ++ A G + +PE +A + A+DVWS G++
Sbjct: 181 -NSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIV 239
Query: 232 LYILLS-GMPPFWGKTKSKIFDAV 254
L+ ++S G P+W + + AV
Sbjct: 240 LWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 103/207 (49%), Gaps = 17/207 (8%)
Query: 44 LGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNV 103
+G+++G G FG + + K+ G+V A K + T + +++ K E+ ++ K + H N+
Sbjct: 12 VGQRIGSGSFGTVYK--GKWHGDV-AVKML-NVTAPTPQQLQAFKNEVGVLRK-TRHVNI 66
Query: 104 VDLKAVYEEEDYVHLLMELCAGGELFHRLEKY-GRFSETEARVIFRHLMQVVSYCHGNGV 162
+ L Y + ++ + C G L+H L +F + I R Q + Y H +
Sbjct: 67 L-LFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 125
Query: 163 VHRDLKPENILLATKSSSSPIKLADFGLATY---IKAGQNLHGTVGSPFYIAPEVL---- 215
+HRDLK NI L + +K+ DFGLAT GS ++APEV+
Sbjct: 126 IHRDLKSNNIFLHEDLT---VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 216 AGGYNQAADVWSAGVILYILLSGMPPF 242
Y+ +DV++ G++LY L++G P+
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 120/262 (45%), Gaps = 25/262 (9%)
Query: 43 VLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPN 102
+ +LG GQ+G + E K +A K++ +D + +V E +M ++ HPN
Sbjct: 220 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPN 274
Query: 103 VVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVS---YCHG 159
+V L V E +++ E G L L + R E A V+ Q+ S Y
Sbjct: 275 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEK 333
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF---YIAPEVLA 216
+HR+L N L+ + +K+ADFGL+ + G G+ F + APE LA
Sbjct: 334 KNFIHRNLAARNCLVG---ENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 389
Query: 217 GGYNQ---AADVWSAGVILY-ILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISAS 272
YN+ +DVW+ GV+L+ I GM P+ G S++++ + D R +
Sbjct: 390 --YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP--EGCPEK 444
Query: 273 ARDLIMGMLRVDPSTRLTAAEV 294
+L+ + +PS R + AE+
Sbjct: 445 VYELMRACWQWNPSDRPSFAEI 466
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 119/261 (45%), Gaps = 18/261 (6%)
Query: 43 VLGKQLGWGQFGVIRE-CSDKFTGEVL--ACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
VL + LG G FG + E GE + A K+ KD T+++ E IM L
Sbjct: 11 VLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKD--CTLDNKEKFMSEAVIMKNLD- 67
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFR-HLMQVVSYCH 158
HP++V L + EEE ++MEL GEL H LE+ + V++ + + ++Y
Sbjct: 68 HPHIVKLIGIIEEEP-TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE 126
Query: 159 GNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGS-PF-YIAPEVLA 216
VHRD+ NIL+A S +KL DFGL+ YI+ +V P +++PE +
Sbjct: 127 SINCVHRDIAVRNILVA---SPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESIN 183
Query: 217 -GGYNQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASAR 274
+ A+DVW V ++ +LS G PF+ + + D R P D
Sbjct: 184 FRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGD-RLPKP--DLCPPVLY 240
Query: 275 DLIMGMLRVDPSTRLTAAEVL 295
L+ DPS R E++
Sbjct: 241 TLMTRCWDYDPSDRPRFTELV 261
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 90/204 (44%), Gaps = 42/204 (20%)
Query: 135 YGRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYI 194
Y ++ + R +++ + YCH G++HRD+KP N+++ + ++L D+GLA +
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFY 182
Query: 195 KAGQNLHGTVGSPFYIAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFD 252
GQ + V S ++ PE+L Y+ + D+WS G +L ++ PF+ + +D
Sbjct: 183 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN--YD 240
Query: 253 A-VRAADLRFPSDPWDHI-----------------------------------SASARDL 276
VR A + D +D+I S A D
Sbjct: 241 QLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDF 300
Query: 277 IMGMLRVDPSTRLTAAEVLAHSWM 300
+ +LR D +RLTA E + H +
Sbjct: 301 LDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 90/204 (44%), Gaps = 42/204 (20%)
Query: 135 YGRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYI 194
Y ++ + R +++ + YCH G++HRD+KP N+++ + ++L D+GLA +
Sbjct: 124 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFY 181
Query: 195 KAGQNLHGTVGSPFYIAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFD 252
GQ + V S ++ PE+L Y+ + D+WS G +L ++ PF+ + +D
Sbjct: 182 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN--YD 239
Query: 253 A-VRAADLRFPSDPWDHI-----------------------------------SASARDL 276
VR A + D +D+I S A D
Sbjct: 240 QLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDF 299
Query: 277 IMGMLRVDPSTRLTAAEVLAHSWM 300
+ +LR D +RLTA E + H +
Sbjct: 300 LDKLLRYDHQSRLTAREAMEHPYF 323
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 90/204 (44%), Gaps = 42/204 (20%)
Query: 135 YGRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYI 194
Y ++ + R +++ + YCH G++HRD+KP N+++ + ++L D+GLA +
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFY 182
Query: 195 KAGQNLHGTVGSPFYIAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFD 252
GQ + V S ++ PE+L Y+ + D+WS G +L ++ PF+ + +D
Sbjct: 183 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN--YD 240
Query: 253 A-VRAADLRFPSDPWDHI-----------------------------------SASARDL 276
VR A + D +D+I S A D
Sbjct: 241 QLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDF 300
Query: 277 IMGMLRVDPSTRLTAAEVLAHSWM 300
+ +LR D +RLTA E + H +
Sbjct: 301 LDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 90/204 (44%), Gaps = 42/204 (20%)
Query: 135 YGRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYI 194
Y ++ + R +++ + YCH G++HRD+KP N+++ + ++L D+GLA +
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFY 182
Query: 195 KAGQNLHGTVGSPFYIAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFD 252
GQ + V S ++ PE+L Y+ + D+WS G +L ++ PF+ + +D
Sbjct: 183 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN--YD 240
Query: 253 A-VRAADLRFPSDPWDHI-----------------------------------SASARDL 276
VR A + D +D+I S A D
Sbjct: 241 QLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDF 300
Query: 277 IMGMLRVDPSTRLTAAEVLAHSWM 300
+ +LR D +RLTA E + H +
Sbjct: 301 LDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 104/225 (46%), Gaps = 33/225 (14%)
Query: 31 DATQISNLSDRYVLGKQLGWGQFGVIRECS----DKFTGEVLACKSIAKDRLVTVEDVRS 86
D TQ +++ +QLG G FG + C TGEV+A K + T E +R
Sbjct: 34 DPTQFEERHLKFL--QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRD 88
Query: 87 IKLEIEIMTKLSGHPNVVDLKAV-YEE-EDYVHLLMELCAGGELFHRLEKYGRFSETEAR 144
+ EIEI+ L H N+V K V Y + L+ME G L L+K+ + R
Sbjct: 89 FEREIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH------KER 141
Query: 145 VIFRHLMQVVS-------YCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYI--- 194
+ L+Q S Y +HRDL NIL+ ++ +K+ DFGL +
Sbjct: 142 IDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQD 198
Query: 195 KAGQNLHGTVGSP-FYIAPEVLA-GGYNQAADVWSAGVILYILLS 237
K + SP F+ APE L ++ A+DVWS GV+LY L +
Sbjct: 199 KEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 90/204 (44%), Gaps = 42/204 (20%)
Query: 135 YGRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYI 194
Y ++ + R +++ + YCH G++HRD+KP N+++ + ++L D+GLA +
Sbjct: 123 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFY 180
Query: 195 KAGQNLHGTVGSPFYIAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFD 252
GQ + V S ++ PE+L Y+ + D+WS G +L ++ PF+ + +D
Sbjct: 181 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN--YD 238
Query: 253 A-VRAADLRFPSDPWDHI-----------------------------------SASARDL 276
VR A + D +D+I S A D
Sbjct: 239 QLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDF 298
Query: 277 IMGMLRVDPSTRLTAAEVLAHSWM 300
+ +LR D +RLTA E + H +
Sbjct: 299 LDKLLRYDHQSRLTAREAMEHPYF 322
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 104/225 (46%), Gaps = 33/225 (14%)
Query: 31 DATQISNLSDRYVLGKQLGWGQFGVIRECS----DKFTGEVLACKSIAKDRLVTVEDVRS 86
D TQ +++ +QLG G FG + C TGEV+A K + T E +R
Sbjct: 6 DPTQFEERHLKFL--QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRD 60
Query: 87 IKLEIEIMTKLSGHPNVVDLKAV-YEE-EDYVHLLMELCAGGELFHRLEKYGRFSETEAR 144
+ EIEI+ L H N+V K V Y + L+ME G L L+K+ + R
Sbjct: 61 FEREIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH------KER 113
Query: 145 VIFRHLMQVVS-------YCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYI--- 194
+ L+Q S Y +HRDL NIL+ ++ +K+ DFGL +
Sbjct: 114 IDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQD 170
Query: 195 KAGQNLHGTVGSP-FYIAPEVLA-GGYNQAADVWSAGVILYILLS 237
K + SP F+ APE L ++ A+DVWS GV+LY L +
Sbjct: 171 KEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 119/264 (45%), Gaps = 37/264 (14%)
Query: 47 QLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEI---EIMTKLSG--HP 101
+LG G FG + DK TG A V+ ++LE+ E + +G P
Sbjct: 81 RLGRGSFGEVHRMEDKQTGFQCA--------------VKKVRLEVFRAEELMACAGLTSP 126
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
+V L E +V++ MEL GG L +++ G E A ++ + Y H
Sbjct: 127 RIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRR 186
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKA---GQNL---HGTVGSPFYIAPEVL 215
++H D+K +N+LL++ S + L DFG A ++ G++L G+ ++APEV+
Sbjct: 187 ILHGDVKADNVLLSSDGSHA--ALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVV 244
Query: 216 AGGYNQA-ADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASAR 274
G A DVWS+ ++ +L+G P+ ++ F + P I S
Sbjct: 245 LGRSCDAKVDVWSSCCMMLHMLNGCHPW-----TQFFRGPLCLKIASEPPPVREIPPSCA 299
Query: 275 DL----IMGMLRVDPSTRLTAAEV 294
L I LR +P R++AAE+
Sbjct: 300 PLTAQAIQEGLRKEPIHRVSAAEL 323
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 120/262 (45%), Gaps = 25/262 (9%)
Query: 43 VLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPN 102
+ +LG GQ+G + E K +A K++ +D + +V E +M ++ HPN
Sbjct: 223 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPN 277
Query: 103 VVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVS---YCHG 159
+V L V E +++ E G L L + R E A V+ Q+ S Y
Sbjct: 278 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEK 336
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF---YIAPEVLA 216
+HR+L N L+ + +K+ADFGL+ + G G+ F + APE LA
Sbjct: 337 KNFIHRNLAARNCLVG---ENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 392
Query: 217 GGYNQ---AADVWSAGVILY-ILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISAS 272
YN+ +DVW+ GV+L+ I GM P+ G S++++ + D R +
Sbjct: 393 --YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP--EGCPEK 447
Query: 273 ARDLIMGMLRVDPSTRLTAAEV 294
+L+ + +PS R + AE+
Sbjct: 448 VYELMRACWQWNPSDRPSFAEI 469
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 103/226 (45%), Gaps = 35/226 (15%)
Query: 31 DATQISNLSDRYVLGKQLGWGQFGVIRECS----DKFTGEVLACKSIAKDRLVTVEDVRS 86
D TQ +++ +QLG G FG + C TGEV+A K + T E +R
Sbjct: 3 DPTQFEERHLKFL--QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRD 57
Query: 87 IKLEIEIMTKLSGHPNVVDLKAV-YEE-EDYVHLLMELCAGGELFHRLEKYGRFSETEAR 144
+ EIEI+ L H N+V K V Y + L+ME G L L+K+ + R
Sbjct: 58 FEREIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH------KER 110
Query: 145 VIFRHLMQVVS-------YCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAG 197
+ L+Q S Y +HRDL NIL+ ++ +K+ DFGL +
Sbjct: 111 IDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQD 167
Query: 198 QNLHGTVGSP-----FYIAPEVLA-GGYNQAADVWSAGVILYILLS 237
+ V P F+ APE L ++ A+DVWS GV+LY L +
Sbjct: 168 KEFF-KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 90/204 (44%), Gaps = 42/204 (20%)
Query: 135 YGRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYI 194
Y ++ + R +++ + YCH G++HRD+KP N+++ + ++L D+GLA +
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFY 182
Query: 195 KAGQNLHGTVGSPFYIAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFD 252
GQ + V S ++ PE+L Y+ + D+WS G +L ++ PF+ + +D
Sbjct: 183 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN--YD 240
Query: 253 A-VRAADLRFPSDPWDHI-----------------------------------SASARDL 276
VR A + D +D+I S A D
Sbjct: 241 QLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDF 300
Query: 277 IMGMLRVDPSTRLTAAEVLAHSWM 300
+ +LR D +RLTA E + H +
Sbjct: 301 LDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 120/262 (45%), Gaps = 25/262 (9%)
Query: 43 VLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPN 102
+ +LG GQ+G + E K +A K++ +D + +V E +M ++ HPN
Sbjct: 262 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPN 316
Query: 103 VVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVS---YCHG 159
+V L V E +++ E G L L + R E A V+ Q+ S Y
Sbjct: 317 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEK 375
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF---YIAPEVLA 216
+HR+L N L+ + +K+ADFGL+ + G G+ F + APE LA
Sbjct: 376 KNFIHRNLAARNCLVG---ENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLA 431
Query: 217 GGYNQ---AADVWSAGVILY-ILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISAS 272
YN+ +DVW+ GV+L+ I GM P+ G S++++ + D R +
Sbjct: 432 --YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERP--EGCPEK 486
Query: 273 ARDLIMGMLRVDPSTRLTAAEV 294
+L+ + +PS R + AE+
Sbjct: 487 VYELMRACWQWNPSDRPSFAEI 508
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 90/204 (44%), Gaps = 42/204 (20%)
Query: 135 YGRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYI 194
Y ++ + R +++ + YCH G++HRD+KP N+++ + ++L D+GLA +
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFY 182
Query: 195 KAGQNLHGTVGSPFYIAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFD 252
GQ + V S ++ PE+L Y+ + D+WS G +L ++ PF+ + +D
Sbjct: 183 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN--YD 240
Query: 253 A-VRAADLRFPSDPWDHI-----------------------------------SASARDL 276
VR A + D +D+I S A D
Sbjct: 241 QLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDF 300
Query: 277 IMGMLRVDPSTRLTAAEVLAHSWM 300
+ +LR D +RLTA E + H +
Sbjct: 301 LDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 104/225 (46%), Gaps = 33/225 (14%)
Query: 31 DATQISNLSDRYVLGKQLGWGQFGVIRECS----DKFTGEVLACKSIAKDRLVTVEDVRS 86
D TQ +++ +QLG G FG + C TGEV+A K + T E +R
Sbjct: 10 DPTQFEERHLKFL--QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRD 64
Query: 87 IKLEIEIMTKLSGHPNVVDLKAV-YEE-EDYVHLLMELCAGGELFHRLEKYGRFSETEAR 144
+ EIEI+ L H N+V K V Y + L+ME G L L+K+ + R
Sbjct: 65 FEREIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH------KER 117
Query: 145 VIFRHLMQVVS-------YCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYI--- 194
+ L+Q S Y +HRDL NIL+ ++ +K+ DFGL +
Sbjct: 118 IDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQD 174
Query: 195 KAGQNLHGTVGSP-FYIAPEVLA-GGYNQAADVWSAGVILYILLS 237
K + SP F+ APE L ++ A+DVWS GV+LY L +
Sbjct: 175 KEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 104/225 (46%), Gaps = 33/225 (14%)
Query: 31 DATQISNLSDRYVLGKQLGWGQFGVIRECS----DKFTGEVLACKSIAKDRLVTVEDVRS 86
D TQ +++ +QLG G FG + C TGEV+A K + T E +R
Sbjct: 9 DPTQFEERHLKFL--QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRD 63
Query: 87 IKLEIEIMTKLSGHPNVVDLKAV-YEE-EDYVHLLMELCAGGELFHRLEKYGRFSETEAR 144
+ EIEI+ L H N+V K V Y + L+ME G L L+K+ + R
Sbjct: 64 FEREIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH------KER 116
Query: 145 VIFRHLMQVVS-------YCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYI--- 194
+ L+Q S Y +HRDL NIL+ ++ +K+ DFGL +
Sbjct: 117 IDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQD 173
Query: 195 KAGQNLHGTVGSP-FYIAPEVLA-GGYNQAADVWSAGVILYILLS 237
K + SP F+ APE L ++ A+DVWS GV+LY L +
Sbjct: 174 KEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 104/225 (46%), Gaps = 33/225 (14%)
Query: 31 DATQISNLSDRYVLGKQLGWGQFGVIRECS----DKFTGEVLACKSIAKDRLVTVEDVRS 86
D TQ +++ +QLG G FG + C TGEV+A K + T E +R
Sbjct: 3 DPTQFEERHLKFL--QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRD 57
Query: 87 IKLEIEIMTKLSGHPNVVDLKAV-YEE-EDYVHLLMELCAGGELFHRLEKYGRFSETEAR 144
+ EIEI+ L H N+V K V Y + L+ME G L L+K+ + R
Sbjct: 58 FEREIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH------KER 110
Query: 145 VIFRHLMQVVS-------YCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYI--- 194
+ L+Q S Y +HRDL NIL+ ++ +K+ DFGL +
Sbjct: 111 IDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQD 167
Query: 195 KAGQNLHGTVGSP-FYIAPEVLA-GGYNQAADVWSAGVILYILLS 237
K + SP F+ APE L ++ A+DVWS GV+LY L +
Sbjct: 168 KEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 90/204 (44%), Gaps = 42/204 (20%)
Query: 135 YGRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYI 194
Y ++ + R +++ + YCH G++HRD+KP N+++ + ++L D+GLA +
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFY 182
Query: 195 KAGQNLHGTVGSPFYIAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFD 252
GQ + V S ++ PE+L Y+ + D+WS G +L ++ PF+ + +D
Sbjct: 183 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN--YD 240
Query: 253 A-VRAADLRFPSDPWDHI-----------------------------------SASARDL 276
VR A + D +D+I S A D
Sbjct: 241 QLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDF 300
Query: 277 IMGMLRVDPSTRLTAAEVLAHSWM 300
+ +LR D +RLTA E + H +
Sbjct: 301 LDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 104/225 (46%), Gaps = 33/225 (14%)
Query: 31 DATQISNLSDRYVLGKQLGWGQFGVIRECS----DKFTGEVLACKSIAKDRLVTVEDVRS 86
D TQ +++ +QLG G FG + C TGEV+A K + T E +R
Sbjct: 8 DPTQFEERHLKFL--QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRD 62
Query: 87 IKLEIEIMTKLSGHPNVVDLKAV-YEE-EDYVHLLMELCAGGELFHRLEKYGRFSETEAR 144
+ EIEI+ L H N+V K V Y + L+ME G L L+K+ + R
Sbjct: 63 FEREIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH------KER 115
Query: 145 VIFRHLMQVVS-------YCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYI--- 194
+ L+Q S Y +HRDL NIL+ ++ +K+ DFGL +
Sbjct: 116 IDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQD 172
Query: 195 KAGQNLHGTVGSP-FYIAPEVLA-GGYNQAADVWSAGVILYILLS 237
K + SP F+ APE L ++ A+DVWS GV+LY L +
Sbjct: 173 KEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 104/225 (46%), Gaps = 33/225 (14%)
Query: 31 DATQISNLSDRYVLGKQLGWGQFGVIRECS----DKFTGEVLACKSIAKDRLVTVEDVRS 86
D TQ +++ +QLG G FG + C TGEV+A K + T E +R
Sbjct: 2 DPTQFEERHLKFL--QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRD 56
Query: 87 IKLEIEIMTKLSGHPNVVDLKAV-YEE-EDYVHLLMELCAGGELFHRLEKYGRFSETEAR 144
+ EIEI+ L H N+V K V Y + L+ME G L L+K+ + R
Sbjct: 57 FEREIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH------KER 109
Query: 145 VIFRHLMQVVS-------YCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYI--- 194
+ L+Q S Y +HRDL NIL+ ++ +K+ DFGL +
Sbjct: 110 IDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQD 166
Query: 195 KAGQNLHGTVGSP-FYIAPEVLA-GGYNQAADVWSAGVILYILLS 237
K + SP F+ APE L ++ A+DVWS GV+LY L +
Sbjct: 167 KEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 104/225 (46%), Gaps = 33/225 (14%)
Query: 31 DATQISNLSDRYVLGKQLGWGQFGVIRECS----DKFTGEVLACKSIAKDRLVTVEDVRS 86
D TQ +++ +QLG G FG + C TGEV+A K + T E +R
Sbjct: 7 DPTQFEERHLKFL--QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRD 61
Query: 87 IKLEIEIMTKLSGHPNVVDLKAV-YEE-EDYVHLLMELCAGGELFHRLEKYGRFSETEAR 144
+ EIEI+ L H N+V K V Y + L+ME G L L+K+ + R
Sbjct: 62 FEREIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH------KER 114
Query: 145 VIFRHLMQVVS-------YCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYI--- 194
+ L+Q S Y +HRDL NIL+ ++ +K+ DFGL +
Sbjct: 115 IDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQD 171
Query: 195 KAGQNLHGTVGSP-FYIAPEVLA-GGYNQAADVWSAGVILYILLS 237
K + SP F+ APE L ++ A+DVWS GV+LY L +
Sbjct: 172 KEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 119/264 (45%), Gaps = 37/264 (14%)
Query: 47 QLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEI---EIMTKLSG--HP 101
+LG G FG + DK TG A V+ ++LE+ E + +G P
Sbjct: 100 RLGRGSFGEVHRMEDKQTGFQCA--------------VKKVRLEVFRAEELMACAGLTSP 145
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
+V L E +V++ MEL GG L +++ G E A ++ + Y H
Sbjct: 146 RIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRR 205
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKA---GQNL---HGTVGSPFYIAPEVL 215
++H D+K +N+LL++ S + L DFG A ++ G++L G+ ++APEV+
Sbjct: 206 ILHGDVKADNVLLSSDGSHA--ALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVV 263
Query: 216 AGGYNQA-ADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASAR 274
G A DVWS+ ++ +L+G P+ ++ F + P I S
Sbjct: 264 LGRSCDAKVDVWSSCCMMLHMLNGCHPW-----TQFFRGPLCLKIASEPPPVREIPPSCA 318
Query: 275 DL----IMGMLRVDPSTRLTAAEV 294
L I LR +P R++AAE+
Sbjct: 319 PLTAQAIQEGLRKEPIHRVSAAEL 342
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 104/225 (46%), Gaps = 33/225 (14%)
Query: 31 DATQISNLSDRYVLGKQLGWGQFGVIRECS----DKFTGEVLACKSIAKDRLVTVEDVRS 86
D TQ +++ +QLG G FG + C TGEV+A K + T E +R
Sbjct: 3 DPTQFEERHLKFL--QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRD 57
Query: 87 IKLEIEIMTKLSGHPNVVDLKAV-YEE-EDYVHLLMELCAGGELFHRLEKYGRFSETEAR 144
+ EIEI+ L H N+V K V Y + L+ME G L L+K+ + R
Sbjct: 58 FEREIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH------KER 110
Query: 145 VIFRHLMQVVS-------YCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYI--- 194
+ L+Q S Y +HRDL NIL+ ++ +K+ DFGL +
Sbjct: 111 IDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQD 167
Query: 195 KAGQNLHGTVGSP-FYIAPEVLA-GGYNQAADVWSAGVILYILLS 237
K + SP F+ APE L ++ A+DVWS GV+LY L +
Sbjct: 168 KEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 90/204 (44%), Gaps = 42/204 (20%)
Query: 135 YGRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYI 194
Y ++ + R +++ + YCH G++HRD+KP N+++ + ++L D+GLA +
Sbjct: 125 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFY 182
Query: 195 KAGQNLHGTVGSPFYIAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFD 252
GQ + V S ++ PE+L Y+ + D+WS G +L ++ PF+ + +D
Sbjct: 183 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN--YD 240
Query: 253 A-VRAADLRFPSDPWDHI-----------------------------------SASARDL 276
VR A + D +D+I S A D
Sbjct: 241 QLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDF 300
Query: 277 IMGMLRVDPSTRLTAAEVLAHSWM 300
+ +LR D +RLTA E + H +
Sbjct: 301 LDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 90/204 (44%), Gaps = 42/204 (20%)
Query: 135 YGRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYI 194
Y ++ + R +++ + YCH G++HRD+KP N+++ + ++L D+GLA +
Sbjct: 124 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFY 181
Query: 195 KAGQNLHGTVGSPFYIAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFD 252
GQ + V S ++ PE+L Y+ + D+WS G +L ++ PF+ + +D
Sbjct: 182 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN--YD 239
Query: 253 A-VRAADLRFPSDPWDHI-----------------------------------SASARDL 276
VR A + D +D+I S A D
Sbjct: 240 QLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDF 299
Query: 277 IMGMLRVDPSTRLTAAEVLAHSWM 300
+ +LR D +RLTA E + H +
Sbjct: 300 LDKLLRYDHQSRLTAREAMEHPYF 323
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 127/262 (48%), Gaps = 11/262 (4%)
Query: 47 QLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDL 106
+LG G GV+ + S K +G V+A K I + + + I E++++ + + P +V
Sbjct: 32 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN--QIIRELQVLHECNS-PYIVGF 88
Query: 107 KAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCH-GNGVVHR 165
+ + + + ME GG L L+K GR E + +++ ++Y + ++HR
Sbjct: 89 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 148
Query: 166 DLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAGG-YNQAAD 224
D+KP NIL+ +S IKL DFG++ + + VG+ Y++PE L G Y+ +D
Sbjct: 149 DVKPSNILV---NSRGEIKLCDFGVSGQL-IDSMANSFVGTRSYMSPERLQGTHYSVQSD 204
Query: 225 VWSAGVILYILLSGMPPFW-GKTKSKIFDAV-RAADLRFPSDPWDHISASARDLIMGMLR 282
+WS G+ L + G P G IF+ + + P P S +D + L
Sbjct: 205 IWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLI 264
Query: 283 VDPSTRLTAAEVLAHSWMEECE 304
+P+ R +++ H++++ +
Sbjct: 265 KNPAERADLKQLMVHAFIKRSD 286
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 126/274 (45%), Gaps = 37/274 (13%)
Query: 44 LGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNV 103
+ +++G G FG + ++ G +A K I ++ E V E+ IM +L HPN+
Sbjct: 41 IKEKIGAGSFGTVHRA--EWHGSDVAVK-ILMEQDFHAERVNEFLREVAIMKRLR-HPNI 96
Query: 104 VDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQV---VSYCHGN 160
V + + ++ E + G L+ L K G + + R V ++Y H
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 161 G--VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHG--TVGSPFYIAPEVLA 216
+VHRDLK N+L+ K + +K+ DFGL+ +KA L G+P ++APEVL
Sbjct: 157 NPPIVHRDLKSPNLLVDKKYT---VKVCDFGLSR-LKASXFLXSKXAAGTPEWMAPEVLR 212
Query: 217 G-GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAV--RAADLRFP----------- 262
N+ +DV+S GVIL+ L + P+ +++ AV + L P
Sbjct: 213 DEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAII 272
Query: 263 -----SDPWDHIS-ASARDLIMGMLR--VDPSTR 288
++PW S A+ DL+ +++ V P R
Sbjct: 273 EGCWTNEPWKRPSFATIMDLLRPLIKSAVPPPNR 306
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 104/225 (46%), Gaps = 33/225 (14%)
Query: 31 DATQISNLSDRYVLGKQLGWGQFGVIRECS----DKFTGEVLACKSIAKDRLVTVEDVRS 86
D TQ +++ +QLG G FG + C TGEV+A K + T E +R
Sbjct: 1 DPTQFEERHLKFL--QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRD 55
Query: 87 IKLEIEIMTKLSGHPNVVDLKAV-YEE-EDYVHLLMELCAGGELFHRLEKYGRFSETEAR 144
+ EIEI+ L H N+V K V Y + L+ME G L L+K+ + R
Sbjct: 56 FEREIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH------KER 108
Query: 145 VIFRHLMQVVS-------YCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYI--- 194
+ L+Q S Y +HRDL NIL+ ++ +K+ DFGL +
Sbjct: 109 IDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQD 165
Query: 195 KAGQNLHGTVGSP-FYIAPEVLA-GGYNQAADVWSAGVILYILLS 237
K + SP F+ APE L ++ A+DVWS GV+LY L +
Sbjct: 166 KEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 21/214 (9%)
Query: 44 LGKQLGWGQFGVIRECSDKFTGEVLACKSIA----KDRLVTVEDVRSIKLEIEIMTKLSG 99
L + +G G FG + + G+ +A K+ +D T+E+VR E ++ L
Sbjct: 11 LEEIIGIGGFGKVYRAF--WIGDEVAVKAARHDPDEDISQTIENVRQ---EAKLFAMLK- 64
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
HPN++ L+ V +E + L+ME GG L +R+ R + + ++Y H
Sbjct: 65 HPNIIALRGVCLKEPNLCLVMEFARGGPL-NRVLSGKRIPPDILVNWAVQIARGMNYLHD 123
Query: 160 NGVV---HRDLKPENILLATKS-----SSSPIKLADFGLATYIKAGQNLHGTVGSPFYIA 211
+V HRDLK NIL+ K S+ +K+ DFGLA + G+ ++A
Sbjct: 124 EAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAA-GAYAWMA 182
Query: 212 PEVL-AGGYNQAADVWSAGVILYILLSGMPPFWG 244
PEV+ A +++ +DVWS GV+L+ LL+G PF G
Sbjct: 183 PEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRG 216
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 90/204 (44%), Gaps = 42/204 (20%)
Query: 135 YGRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYI 194
Y ++ + R +++ + YCH G++HRD+KP N+++ + ++L D+GLA +
Sbjct: 130 YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFY 187
Query: 195 KAGQNLHGTVGSPFYIAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFD 252
GQ + V S ++ PE+L Y+ + D+WS G +L ++ PF+ + +D
Sbjct: 188 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN--YD 245
Query: 253 A-VRAADLRFPSDPWDHI-----------------------------------SASARDL 276
VR A + D +D+I S A D
Sbjct: 246 QLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDF 305
Query: 277 IMGMLRVDPSTRLTAAEVLAHSWM 300
+ +LR D +RLTA E + H +
Sbjct: 306 LDKLLRYDHQSRLTAREAMEHPYF 329
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 101/240 (42%), Gaps = 38/240 (15%)
Query: 35 ISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIM 94
+ LS+ + + ++G G F + + + +V + IA L+ I E++ +
Sbjct: 16 VPQLSNVFKIEDKIGEGTFSSVYLATAQL--QVGPEEKIALKHLIPTSHPIRIAAELQCL 73
Query: 95 TKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVV 154
T G NV+ +K + + D+V + M L+ S E R +L + +
Sbjct: 74 TVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESF---LDILNSLSFQEVREYMLNLFKAL 130
Query: 155 SYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLA-----------TYIKA------- 196
H G+VHRD+KP N L + L DFGLA ++++
Sbjct: 131 KRIHQFGIVHRDVKPSNFLYNRRLKK--YALVDFGLAQGTHDTKIELLKFVQSEAQQERC 188
Query: 197 -----------GQNLHGTVGSPFYIAPEVLAGGYNQ--AADVWSAGVILYILLSGMPPFW 243
Q + G+P + APEVL NQ A D+WSAGVI LLSG PF+
Sbjct: 189 SQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFY 248
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 110/235 (46%), Gaps = 23/235 (9%)
Query: 30 LDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRL---VTVEDVRS 86
LDAT IS + K +G G+FG + CS + S+A L T + R
Sbjct: 13 LDATNIS-------IDKVVGAGEFGEV--CSGRLKLPSKKEISVAIKTLKVGYTEKQRRD 63
Query: 87 IKLEIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKY-GRFSETEARV 145
E IM + HPN++ L+ V + V ++ E G L L K+ +F+ +
Sbjct: 64 FLGEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVG 122
Query: 146 IFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIK----AGQNLH 201
+ R + + Y G VHRDL NIL+ +S+ K++DFGL+ ++ A
Sbjct: 123 MLRGIASGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTR 179
Query: 202 GTVGSPFYIAPEVLA-GGYNQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAV 254
G + +PE +A + A+DVWS G++L+ ++S G P+W + + AV
Sbjct: 180 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 234
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 110/235 (46%), Gaps = 23/235 (9%)
Query: 30 LDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRL---VTVEDVRS 86
LDAT IS + K +G G+FG + CS + S+A L T + R
Sbjct: 13 LDATNIS-------IDKVVGAGEFGEV--CSGRLKLPSKKEISVAIKTLKVGYTEKQRRD 63
Query: 87 IKLEIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKY-GRFSETEARV 145
E IM + HPN++ L+ V + V ++ E G L L K+ +F+ +
Sbjct: 64 FLGEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG 122
Query: 146 IFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIK----AGQNLH 201
+ R + + Y G VHRDL NIL+ +S+ K++DFGL+ ++ A
Sbjct: 123 MLRGIASGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTR 179
Query: 202 GTVGSPFYIAPEVLA-GGYNQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAV 254
G + +PE +A + A+DVWS G++L+ ++S G P+W + + AV
Sbjct: 180 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 234
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 123/271 (45%), Gaps = 30/271 (11%)
Query: 1 MDTNNSEDSSQLSTQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECS 60
+D ED ++ QF LDA+ I + + +G G+FG +
Sbjct: 21 IDPETYEDPNRAVHQFAKE----------LDASCIK-------IERVIGAGEFGEVCSGR 63
Query: 61 DKFTGEVLACKSIAKDRL-VTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVYEEEDYVHLL 119
K G+ +I ++ T + R E IM + HPNVV L+ V V ++
Sbjct: 64 LKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFD-HPNVVHLEGVVTRGKPVMIV 122
Query: 120 MELCAGGELFHRLEKY-GRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLATKS 178
+E G L L K+ G+F+ + + R + + Y G VHRDL NIL+ +
Sbjct: 123 IEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILV---N 179
Query: 179 SSSPIKLADFGLATYIKAG-QNLHGTVGSPF---YIAPEVLA-GGYNQAADVWSAGVILY 233
S+ K++DFGL+ I+ + ++ T G + APE + + A+DVWS G++++
Sbjct: 180 SNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMW 239
Query: 234 ILLS-GMPPFWGKTKSKIFDAVRAADLRFPS 263
++S G P+W + + A+ R P+
Sbjct: 240 EVMSYGERPYWDMSNQDVIKAIEEG-YRLPA 269
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 110/235 (46%), Gaps = 23/235 (9%)
Query: 30 LDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRL---VTVEDVRS 86
LDAT IS + K +G G+FG + CS + S+A L T + R
Sbjct: 30 LDATNIS-------IDKVVGAGEFGEV--CSGRLKLPSKKEISVAIKTLKVGYTEKQRRD 80
Query: 87 IKLEIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKY-GRFSETEARV 145
E IM + HPN++ L+ V + V ++ E G L L K+ +F+ +
Sbjct: 81 FLGEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG 139
Query: 146 IFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIK----AGQNLH 201
+ R + + Y G VHRDL NIL+ +S+ K++DFGL+ ++ A
Sbjct: 140 MLRGIASGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTR 196
Query: 202 GTVGSPFYIAPEVLA-GGYNQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAV 254
G + +PE +A + A+DVWS G++L+ ++S G P+W + + AV
Sbjct: 197 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 251
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 131/268 (48%), Gaps = 17/268 (6%)
Query: 47 QLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDL 106
+LG G GV+ + S K +G V+A K I + + + I E++++ + + P +V
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN--QIIRELQVLHECNS-PYIVGF 69
Query: 107 KAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCH-GNGVVHR 165
+ + + + ME GG L L+K GR E + +++ ++Y + ++HR
Sbjct: 70 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 129
Query: 166 DLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAGG-YNQAAD 224
D+KP NIL+ ++ IKL DFG++ + + VG+ Y++PE L G Y+ +D
Sbjct: 130 DVKPSNILVNSRGE---IKLCDFGVSGQL-IDSMANSFVGTRSYMSPERLQGTHYSVQSD 185
Query: 225 VWSAGVILYILLSG---MPPFWGKTKSK----IFDAV-RAADLRFPSDPWDHISASARDL 276
+WS G+ L + G +PP K S+ IF+ + + P P S +D
Sbjct: 186 IWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDF 245
Query: 277 IMGMLRVDPSTRLTAAEVLAHSWMEECE 304
+ L +P+ R +++ H++++ +
Sbjct: 246 VNKCLIKNPAERADLKQLMVHAFIKRSD 273
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 110/231 (47%), Gaps = 21/231 (9%)
Query: 48 LGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKL-EIEIMTKLSGHPNVVDL 106
+G G+FG + K G+ +C +I + E R L E IM + HPN++ L
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFE-HPNIIRL 82
Query: 107 KAVYEEEDYVHLLMELCAGGEL--FHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVH 164
+ V V +L E G L F RL G+F+ + + R + + Y VH
Sbjct: 83 EGVVTNSMPVMILTEFMENGALDSFLRLND-GQFTVIQLVGMLRGIASGMRYLAEMSYVH 141
Query: 165 RDLKPENILLATKSSSSPIKLADFGLATYIKAG-------QNLHGTVGSPF-YIAPEVLA 216
RDL NIL+ +S+ K++DFGL+ +++ +L G + P + APE +A
Sbjct: 142 RDLAARNILV---NSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKI--PIRWTAPEAIA 196
Query: 217 -GGYNQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAVRAADLRFPSDP 265
+ A+D WS G++++ ++S G P+W + + +A+ D R P P
Sbjct: 197 FRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIE-QDYRLPPPP 246
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 124/284 (43%), Gaps = 25/284 (8%)
Query: 47 QLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDL 106
++G G +G + + K +G+++A K I V ++ + + ++++++ + S P +V
Sbjct: 29 EIGRGAYGSVNKMVHKPSGQIMAVKRIRS--TVDEKEQKQLLMDLDVVMRSSDCPYIVQF 86
Query: 107 KAVYEEEDYVHLLMELCAGGELFHRLEKY------GRFSETEARVIFRHLMQVVSYCHGN 160
E + MEL + F + KY E I ++ +++ N
Sbjct: 87 YGALFREGDCWICMELMSTS--FDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN 144
Query: 161 -GVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVL---- 215
++HRD+KP NILL S IKL DFG++ + G Y+APE +
Sbjct: 145 LKIIHRDIKPSNILL---DRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSA 201
Query: 216 -AGGYNQAADVWSAGVILYILLSGMPPF--WGKTKSKIFDAVRAADLRFPSDPWDHISAS 272
GY+ +DVWS G+ LY L +G P+ W ++ V+ + + S S
Sbjct: 202 SRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPS 261
Query: 273 ARDLIMGMLRVDPSTRLTAAEVLAHSWM----EECEQVAQKPCK 312
+ + L D S R E+L H ++ E +VA CK
Sbjct: 262 FINFVNLCLTKDESKRPKYKELLKHPFILMYEERAVEVACYVCK 305
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 103/216 (47%), Gaps = 32/216 (14%)
Query: 43 VLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPN 102
VLG+Q+G G FG + + ++A KS R D+++ L+ + K HPN
Sbjct: 117 VLGEQIGRGNFGEVFSGRLRADNTLVAVKSC---RETLPPDLKAKFLQEARILKQYSHPN 173
Query: 103 VVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVV-------S 155
+V L V ++ ++++MEL GG+ L G AR+ + L+Q+V
Sbjct: 174 IVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEG------ARLRVKTLLQMVGDAAAGME 227
Query: 156 YCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLA------TYIKAGQNLHGTVGSPF- 208
Y +HRDL N L+ K+ +K++DFG++ Y +G G P
Sbjct: 228 YLESKCCIHRDLAARNCLVTEKNV---LKISDFGMSREEADGVYAASG----GLRQVPVK 280
Query: 209 YIAPEVLA-GGYNQAADVWSAGVILYILLS-GMPPF 242
+ APE L G Y+ +DVWS G++L+ S G P+
Sbjct: 281 WTAPEALNYGRYSSESDVWSFGILLWETFSLGASPY 316
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 125/265 (47%), Gaps = 18/265 (6%)
Query: 47 QLGWGQFGVIRECSD-KFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVD 105
++G G F + + D + T EV C+ +DR +T + + K E E + L HPN+V
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCE--LQDRKLTKSERQRFKEEAEXLKGLQ-HPNIVR 89
Query: 106 LKAVYEE----EDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNG 161
+E + + L+ EL G L L+++ R R +++ + + H
Sbjct: 90 FYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRT 149
Query: 162 --VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAGGY 219
++HRDLK +NI + + S +K+ D GLAT +K +G+P + APE Y
Sbjct: 150 PPIIHRDLKCDNIFITGPTGS--VKIGDLGLAT-LKRASFAKAVIGTPEFXAPEXYEEKY 206
Query: 220 NQAADVWSAGV-ILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHIS-ASARDLI 277
+++ DV++ G L S P + ++I+ V + +D ++ +++I
Sbjct: 207 DESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSG---VKPASFDKVAIPEVKEII 263
Query: 278 MGMLRVDPSTRLTAAEVLAHSWMEE 302
G +R + R + ++L H++ +E
Sbjct: 264 EGCIRQNKDERYSIKDLLNHAFFQE 288
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 110/231 (47%), Gaps = 21/231 (9%)
Query: 48 LGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKL-EIEIMTKLSGHPNVVDL 106
+G G+FG + K G+ +C +I + E R L E IM + HPN++ L
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFE-HPNIIRL 80
Query: 107 KAVYEEEDYVHLLMELCAGGEL--FHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVH 164
+ V V +L E G L F RL G+F+ + + R + + Y VH
Sbjct: 81 EGVVTNSMPVMILTEFMENGALDSFLRLND-GQFTVIQLVGMLRGIASGMRYLAEMSYVH 139
Query: 165 RDLKPENILLATKSSSSPIKLADFGLATYIKAG-------QNLHGTVGSPF-YIAPEVLA 216
RDL NIL+ +S+ K++DFGL+ +++ +L G + P + APE +A
Sbjct: 140 RDLAARNILV---NSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKI--PIRWTAPEAIA 194
Query: 217 -GGYNQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAVRAADLRFPSDP 265
+ A+D WS G++++ ++S G P+W + + +A+ D R P P
Sbjct: 195 FRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIE-QDYRLPPPP 244
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 104/226 (46%), Gaps = 35/226 (15%)
Query: 31 DATQISNLSDRYVLGKQLGWGQFGVIRECS----DKFTGEVLACKSIAKDRLVTVEDVRS 86
D TQ +++ +QLG G FG + C TGEV+A K + T E +R
Sbjct: 4 DPTQFEERHLKFL--QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRD 58
Query: 87 IKLEIEIMTKLSGHPNVVDLKAV-YEE-EDYVHLLMELCAGGELFHRLEKYGRFSETEAR 144
+ EIEI+ L H N+V K V Y + L+ME G L L+K+ + R
Sbjct: 59 FEREIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH------KER 111
Query: 145 VIFRHLMQVVS-------YCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAG 197
+ L+Q S Y +HR+L NIL+ ++ +K+ DFGL +
Sbjct: 112 IDHIKLLQYTSQICKGMEYLGTKRYIHRNLATRNILVENENR---VKIGDFGLTKVLPQD 168
Query: 198 QNLHGTVGSP-----FYIAPEVLA-GGYNQAADVWSAGVILYILLS 237
+ + V P F+ APE L ++ A+DVWS GV+LY L +
Sbjct: 169 KEYY-KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 98/210 (46%), Gaps = 31/210 (14%)
Query: 46 KQLGWGQFGVIRECS----DKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+QLG G FG + C TGEV+A K + T E +R + EIEI+ L H
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSLQ-HD 89
Query: 102 NVVDLKAV-YEE-EDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVS---- 155
N+V K V Y + L+ME G L L+K+ + R+ L+Q S
Sbjct: 90 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH------KERIDHIKLLQYTSQICK 143
Query: 156 ---YCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYI---KAGQNLHGTVGSP-F 208
Y +HRDL NIL+ ++ +K+ DFGL + K + SP F
Sbjct: 144 GMEYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKEPGESPIF 200
Query: 209 YIAPEVLA-GGYNQAADVWSAGVILYILLS 237
+ APE L ++ A+DVWS GV+LY L +
Sbjct: 201 WYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 89/201 (44%), Gaps = 42/201 (20%)
Query: 138 FSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAG 197
++ + R +++ + YCH G++HRD+KP N+++ + ++L D+GLA + G
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFYHPG 185
Query: 198 QNLHGTVGSPFYIAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDA-V 254
Q + V S ++ PE+L Y+ + D+WS G +L ++ PF+ + +D V
Sbjct: 186 QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN--YDQLV 243
Query: 255 RAADLRFPSDPWDHI-----------------------------------SASARDLIMG 279
R A + D +D+I S A D +
Sbjct: 244 RIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDK 303
Query: 280 MLRVDPSTRLTAAEVLAHSWM 300
+LR D +RLTA E + H +
Sbjct: 304 LLRYDHQSRLTAREAMEHPYF 324
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 98/210 (46%), Gaps = 31/210 (14%)
Query: 46 KQLGWGQFGVIRECS----DKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+QLG G FG + C TGEV+A K + T E +R + EIEI+ L H
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSLQ-HD 89
Query: 102 NVVDLKAV-YEE-EDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVS---- 155
N+V K V Y + L+ME G L L+K+ + R+ L+Q S
Sbjct: 90 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH------KERIDHIKLLQYTSQICK 143
Query: 156 ---YCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYI---KAGQNLHGTVGSP-F 208
Y +HRDL NIL+ ++ +K+ DFGL + K + SP F
Sbjct: 144 GMEYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKEPGESPIF 200
Query: 209 YIAPEVLA-GGYNQAADVWSAGVILYILLS 237
+ APE L ++ A+DVWS GV+LY L +
Sbjct: 201 WYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 126/274 (45%), Gaps = 37/274 (13%)
Query: 44 LGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNV 103
+ +++G G FG + ++ G +A K I ++ E V E+ IM +L HPN+
Sbjct: 41 IKEKIGAGSFGTVHRA--EWHGSDVAVK-ILMEQDFHAERVNEFLREVAIMKRLR-HPNI 96
Query: 104 VDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQV---VSYCHGN 160
V + + ++ E + G L+ L K G + + R V ++Y H
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 161 G--VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNL--HGTVGSPFYIAPEVLA 216
+VHR+LK N+L+ K + +K+ DFGL+ +KA L G+P ++APEVL
Sbjct: 157 NPPIVHRNLKSPNLLVDKKYT---VKVCDFGLSR-LKASTFLSSKSAAGTPEWMAPEVLR 212
Query: 217 G-GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAV--RAADLRFP----------- 262
N+ +DV+S GVIL+ L + P+ +++ AV + L P
Sbjct: 213 DEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAII 272
Query: 263 -----SDPWDHIS-ASARDLIMGMLR--VDPSTR 288
++PW S A+ DL+ +++ V P R
Sbjct: 273 EGCWTNEPWKRPSFATIMDLLRPLIKSAVPPPNR 306
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 127/260 (48%), Gaps = 11/260 (4%)
Query: 47 QLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDL 106
+LG G GV+ + S K +G V+A K I + + + I E++++ + + P +V
Sbjct: 16 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN--QIIRELQVLHECNS-PYIVGF 72
Query: 107 KAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCH-GNGVVHR 165
+ + + + ME GG L L+K GR E + +++ ++Y + ++HR
Sbjct: 73 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 132
Query: 166 DLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAGG-YNQAAD 224
D+KP NIL+ ++ IKL DFG++ + + + VG+ Y++PE L G Y+ +D
Sbjct: 133 DVKPSNILVNSRGE---IKLCDFGVSGQL-IDEMANEFVGTRSYMSPERLQGTHYSVQSD 188
Query: 225 VWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVD 284
+WS G+ L + G P ++ D + + P P S +D + L +
Sbjct: 189 IWSMGLSLVEMAVGRYPRPPMAIFELLDYI--VNEPPPKLPSAVFSLEFQDFVNKCLIKN 246
Query: 285 PSTRLTAAEVLAHSWMEECE 304
P+ R +++ H++++ +
Sbjct: 247 PAERADLKQLMVHAFIKRSD 266
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 42/215 (19%)
Query: 135 YGRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYI 194
Y ++ + R L++ + YCH G++HRD+KP N+++ + ++L D+GLA +
Sbjct: 126 YQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKK--LRLIDWGLAEFY 183
Query: 195 KAGQNLHGTVGSPFYIAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFD 252
Q + V S ++ PE+L Y+ + D+WS G +L ++ PF+ + +D
Sbjct: 184 HPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDN--YD 241
Query: 253 A-VRAADL-------------RFPSDP-------------WDH---------ISASARDL 276
VR A + DP W++ +S A DL
Sbjct: 242 QLVRIAKVLGTEELYGYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDL 301
Query: 277 IMGMLRVDPSTRLTAAEVLAHSWMEECEQVAQKPC 311
+ +LR D RLTA E + H + + +P
Sbjct: 302 LDKLLRYDHQQRLTAKEAMEHPYFYPVVKEQSQPS 336
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 101/212 (47%), Gaps = 24/212 (11%)
Query: 43 VLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPN 102
VLG+Q+G G FG + + ++A KS R D+++ L+ + K HPN
Sbjct: 117 VLGEQIGRGNFGEVFSGRLRADNTLVAVKSC---RETLPPDLKAKFLQEARILKQYSHPN 173
Query: 103 VVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVV-------S 155
+V L V ++ ++++MEL GG+ L G AR+ + L+Q+V
Sbjct: 174 IVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEG------ARLRVKTLLQMVGDAAAGME 227
Query: 156 YCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLH--GTVGSPF-YIAP 212
Y +HRDL N L+ K+ +K++DFG++ G G P + AP
Sbjct: 228 YLESKCCIHRDLAARNCLVTEKNV---LKISDFGMSREEADGVXAASGGLRQVPVKWTAP 284
Query: 213 EVLA-GGYNQAADVWSAGVILYILLS-GMPPF 242
E L G Y+ +DVWS G++L+ S G P+
Sbjct: 285 EALNYGRYSSESDVWSFGILLWETFSLGASPY 316
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 30/265 (11%)
Query: 7 EDSSQLSTQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGE 66
ED +Q +F + S +T + + +G G+FG + K G+
Sbjct: 6 EDPNQAVHEFAKEIEASCIT-----------------IERVIGAGEFGEVCSGRLKLPGK 48
Query: 67 VLACKSIAKDRLVTVEDVRSIKL-EIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAG 125
+I ++ E R L E IM + HPN++ L+ V + V ++ E
Sbjct: 49 RELPVAIKTLKVGYTEKQRRDFLGEASIMGQFD-HPNIIHLEGVVTKSKPVMIVTEYMEN 107
Query: 126 GELFHRLEKY-GRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIK 184
G L L+K G+F+ + + R + + Y G VHRDL NIL+ +S+ K
Sbjct: 108 GSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILI---NSNLVCK 164
Query: 185 LADFGLATYI----KAGQNLHGTVGSPFYIAPEVLA-GGYNQAADVWSAGVILYILLS-G 238
++DFGL+ + +A G + APE +A + A+DVWS G++++ ++S G
Sbjct: 165 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYG 224
Query: 239 MPPFWGKTKSKIFDAVRAADLRFPS 263
P+W T + AV R PS
Sbjct: 225 ERPYWEMTNQDVIKAVEEG-YRLPS 248
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 101/219 (46%), Gaps = 21/219 (9%)
Query: 31 DATQISNLSDRYVLGKQLGWGQFGVIRECS----DKFTGEVLACKSIAKDRLVTVEDVRS 86
D TQ +++ +QLG G FG + C TGEV+A K + T E +R
Sbjct: 6 DPTQFEERHLKFL--QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRD 60
Query: 87 IKLEIEIMTKLSGHPNVVDLKAV-YEE-EDYVHLLMELCAGGELFHRLEKYG-RFSETEA 143
+ EIEI+ L H N+V K V Y + L+ME G L L+ + R +
Sbjct: 61 FEREIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKL 119
Query: 144 RVIFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYI---KAGQNL 200
+ + + Y +HRDL NIL+ ++ +K+ DFGL + K +
Sbjct: 120 LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKV 176
Query: 201 HGTVGSP-FYIAPEVLA-GGYNQAADVWSAGVILYILLS 237
SP F+ APE L ++ A+DVWS GV+LY L +
Sbjct: 177 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 24/207 (11%)
Query: 43 VLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPN 102
+ G+ LG G FG + + + TGEV+ K + + E R+ E+++M L HPN
Sbjct: 13 IHGEVLGKGCFGQAIKVTHRETGEVMVMKELIR---FDEETQRTFLKEVKVMRCLE-HPN 68
Query: 103 VVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIF-RHLMQVVSYCHGNG 161
V+ V ++ ++ + E GG L ++ RV F + + ++Y H
Sbjct: 69 VLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMN 128
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYI---------------KAGQNLHGTVGS 206
++HRDL N L+ + + +ADFGLA + + + VG+
Sbjct: 129 IIHRDLNSHNCLVRENKN---VVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGN 185
Query: 207 PFYIAPEVLAG-GYNQAADVWSAGVIL 232
P+++APE++ G Y++ DV+S G++L
Sbjct: 186 PYWMAPEMINGRSYDEKVDVFSFGIVL 212
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 90/204 (44%), Gaps = 42/204 (20%)
Query: 135 YGRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYI 194
Y ++ + R L++ + YCH G++HRD+KP N+++ + ++L D+GLA +
Sbjct: 131 YQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKK--LRLIDWGLAEFY 188
Query: 195 KAGQNLHGTVGSPFYIAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGKTKSKIFD 252
Q + V S ++ PE+L Y+ + D+WS G +L ++ PF+ + +D
Sbjct: 189 HPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDN--YD 246
Query: 253 A-VRAADL-------------RFPSDP-------------WDH---------ISASARDL 276
VR A + DP W++ +S A DL
Sbjct: 247 QLVRIAKVLGTEELYGYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDL 306
Query: 277 IMGMLRVDPSTRLTAAEVLAHSWM 300
+ +LR D RLTA E + H +
Sbjct: 307 LDKLLRYDHQQRLTAKEAMEHPYF 330
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 127/293 (43%), Gaps = 33/293 (11%)
Query: 31 DATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRL---VTVEDVRSI 87
DA++ DR LGK LG G FG + E + C+++A L T + R++
Sbjct: 19 DASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL 78
Query: 88 KLEIEIMTKLSGHPNVVD-LKAVYEEEDYVHLLMELCAGGELFHRLEK------------ 134
E++I+ + H NVV+ L A + + +++E C G L L
Sbjct: 79 MSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPE 138
Query: 135 --YGRFSETEARVIFR-HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLA 191
Y F E + + + + + + +HRDL NILL+ K+ +K+ DFGLA
Sbjct: 139 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV---VKICDFGLA 195
Query: 192 TYIKAGQNL--HGTVGSPF-YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWGKT 246
I + G P ++APE + Y +DVWS GV+L+ + S G P+ G
Sbjct: 196 RDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 255
Query: 247 KSKIF--DAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAH 297
+ F +R P D+ + ++ +PS R T +E++ H
Sbjct: 256 IDEEFCRRLKEGTRMRAP----DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 103/216 (47%), Gaps = 20/216 (9%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
DRY + +G G FG + + D+ E +A K I + + ++E+ ++ ++
Sbjct: 35 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAF----LNQAQIEVRLLELMNK 90
Query: 100 HPN-----VVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVV 154
H +V LK + +++ L+ E+ + + L + F + + Q+
Sbjct: 91 HDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYN--LYDLLRNTNFRGVSLNLTRKFAQQMC 148
Query: 155 SY-----CHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFY 209
+ ++H DLKPENILL S+ IK+ DFG + + GQ ++ + S FY
Sbjct: 149 TALLFLATPELSIIHCDLKPENILLCNPKRSA-IKIVDFGSSCQL--GQRIYQXIQSRFY 205
Query: 210 IAPEVLAG-GYNQAADVWSAGVILYILLSGMPPFWG 244
+PEVL G Y+ A D+WS G IL + +G P F G
Sbjct: 206 RSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSG 241
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 127/294 (43%), Gaps = 34/294 (11%)
Query: 31 DATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRL---VTVEDVRSI 87
DA++ DR LGK LG G FG + E + C+++A L T + R++
Sbjct: 18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL 77
Query: 88 KLEIEIMTKLSGHPNVVD-LKAVYEEEDYVHLLMELCAGGELFHRLEK------------ 134
E++I+ + H NVV+ L A + + +++E C G L L
Sbjct: 78 MSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAP 137
Query: 135 ---YGRFSETEARVIFR-HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGL 190
Y F E + + + + + + +HRDL NILL+ K+ +K+ DFGL
Sbjct: 138 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV---VKICDFGL 194
Query: 191 ATYIKAGQNL--HGTVGSPF-YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWGK 245
A I + G P ++APE + Y +DVWS GV+L+ + S G P+ G
Sbjct: 195 ARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 254
Query: 246 TKSKIF--DAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAH 297
+ F +R P D+ + ++ +PS R T +E++ H
Sbjct: 255 KIDEEFCRRLKEGTRMRAP----DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 103/216 (47%), Gaps = 20/216 (9%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
DRY + +G G FG + + D+ E +A K I + + ++E+ ++ ++
Sbjct: 54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAF----LNQAQIEVRLLELMNK 109
Query: 100 HPN-----VVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVV 154
H +V LK + +++ L+ E+ + + L + F + + Q+
Sbjct: 110 HDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYN--LYDLLRNTNFRGVSLNLTRKFAQQMC 167
Query: 155 SY-----CHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFY 209
+ ++H DLKPENILL S+ IK+ DFG + + GQ ++ + S FY
Sbjct: 168 TALLFLATPELSIIHCDLKPENILLCNPKRSA-IKIVDFG--SSCQLGQRIYQXIQSRFY 224
Query: 210 IAPEVLAG-GYNQAADVWSAGVILYILLSGMPPFWG 244
+PEVL G Y+ A D+WS G IL + +G P F G
Sbjct: 225 RSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSG 260
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 134/310 (43%), Gaps = 74/310 (23%)
Query: 47 QLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDL 106
++G G FG + + + TG+ +A K + + + +++ EI+I+ +L H NVV+L
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKIL-QLLKHENVVNL 82
Query: 107 KAV-------YEE-EDYVHLLMELCA---GGELFHRLEKYGRFSETEARVIFRHLMQVVS 155
+ Y + ++L+ + C G L + L K F+ +E + + + L+ +
Sbjct: 83 IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK---FTLSEIKRVMQMLLNGLY 139
Query: 156 YCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN-----LHGTVGSPFYI 210
Y H N ++HRD+K N+L+ + +KLADFGLA +N V + +Y
Sbjct: 140 YIHRNKILHRDMKAANVLI---TRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 196
Query: 211 APEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKT---------------------- 246
PE+L G Y D+W AG I+ + + P G T
Sbjct: 197 PPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPN 256
Query: 247 ----------------KSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLT 290
K K+ D ++A + DP+ A DLI +L +DP+ R+
Sbjct: 257 VDNYELYEKLELVKGQKRKVKDRLKA----YVRDPY------ALDLIDKLLVLDPAQRID 306
Query: 291 AAEVLAHSWM 300
+ + L H +
Sbjct: 307 SDDALNHDFF 316
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 127/294 (43%), Gaps = 34/294 (11%)
Query: 31 DATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRL---VTVEDVRSI 87
DA++ DR LGK LG G FG + E + C+++A L T + R++
Sbjct: 18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL 77
Query: 88 KLEIEIMTKLSGHPNVVD-LKAVYEEEDYVHLLMELCAGGELFHRLEK------------ 134
E++I+ + H NVV+ L A + + +++E C G L L
Sbjct: 78 MSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAP 137
Query: 135 ---YGRFSETEARVIFR-HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGL 190
Y F E + + + + + + +HRDL NILL+ K+ +K+ DFGL
Sbjct: 138 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV---VKICDFGL 194
Query: 191 ATYIKAGQNL--HGTVGSPF-YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWGK 245
A I + G P ++APE + Y +DVWS GV+L+ + S G P+ G
Sbjct: 195 ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 254
Query: 246 TKSKIF--DAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAH 297
+ F +R P D+ + ++ +PS R T +E++ H
Sbjct: 255 KIDEEFCRRLKEGTRMRAP----DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 127/294 (43%), Gaps = 34/294 (11%)
Query: 31 DATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRL---VTVEDVRSI 87
DA++ DR LGK LG G FG + E + C+++A L T + R++
Sbjct: 20 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL 79
Query: 88 KLEIEIMTKLSGHPNVVD-LKAVYEEEDYVHLLMELCAGGELFHRLEK------------ 134
E++I+ + H NVV+ L A + + +++E C G L L
Sbjct: 80 MSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAP 139
Query: 135 ---YGRFSETEARVIFR-HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGL 190
Y F E + + + + + + +HRDL NILL+ K+ +K+ DFGL
Sbjct: 140 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV---VKICDFGL 196
Query: 191 ATYIKAGQNL--HGTVGSPF-YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWGK 245
A I + G P ++APE + Y +DVWS GV+L+ + S G P+ G
Sbjct: 197 ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 256
Query: 246 TKSKIF--DAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAH 297
+ F +R P D+ + ++ +PS R T +E++ H
Sbjct: 257 KIDEEFCRRLKEGTRMRAP----DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 306
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 127/294 (43%), Gaps = 34/294 (11%)
Query: 31 DATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRL---VTVEDVRSI 87
DA++ DR LGK LG G FG + E + C+++A L T + R++
Sbjct: 9 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL 68
Query: 88 KLEIEIMTKLSGHPNVVD-LKAVYEEEDYVHLLMELCAGGELFHRLEK------------ 134
E++I+ + H NVV+ L A + + +++E C G L L
Sbjct: 69 MSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAP 128
Query: 135 ---YGRFSETEARVIFR-HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGL 190
Y F E + + + + + + +HRDL NILL+ K+ +K+ DFGL
Sbjct: 129 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV---VKICDFGL 185
Query: 191 ATYIKAGQNL--HGTVGSPF-YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWGK 245
A I + G P ++APE + Y +DVWS GV+L+ + S G P+ G
Sbjct: 186 ARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 245
Query: 246 TKSKIF--DAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAH 297
+ F +R P D+ + ++ +PS R T +E++ H
Sbjct: 246 KIDEEFCRRLKEGTRMRAP----DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 127/294 (43%), Gaps = 34/294 (11%)
Query: 31 DATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRL---VTVEDVRSI 87
DA++ DR LGK LG G FG + E + C+++A L T + R++
Sbjct: 18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL 77
Query: 88 KLEIEIMTKLSGHPNVVD-LKAVYEEEDYVHLLMELCAGGELFHRLEK------------ 134
E++I+ + H NVV+ L A + + +++E C G L L
Sbjct: 78 MSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAP 137
Query: 135 ---YGRFSETEARVIFR-HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGL 190
Y F E + + + + + + +HRDL NILL+ K+ +K+ DFGL
Sbjct: 138 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV---VKICDFGL 194
Query: 191 ATYIKAGQNL--HGTVGSPF-YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWGK 245
A I + G P ++APE + Y +DVWS GV+L+ + S G P+ G
Sbjct: 195 ARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 254
Query: 246 TKSKIF--DAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAH 297
+ F +R P D+ + ++ +PS R T +E++ H
Sbjct: 255 KIDEEFCRRLKEGTRMRAP----DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 114/267 (42%), Gaps = 38/267 (14%)
Query: 48 LGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLK 107
+G G FG + + + G+ K + + + E++ + KL H N+V
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-------EKAEREVKALAKLD-HVNIVHYN 70
Query: 108 AVYEEEDY----------------VHLLMELCAGGELFHRLEKYG--RFSETEARVIFRH 149
++ DY + + ME C G L +EK + + A +F
Sbjct: 71 GCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQ 130
Query: 150 LMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFY 209
+ + V Y H +++RDLKP NI L + +K+ DFGL T +K + G+ Y
Sbjct: 131 ITKGVDYIHSKKLINRDLKPSNIFLV---DTKQVKIGDFGLVTSLKNDGKRXRSKGTLRY 187
Query: 210 IAPEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDH 268
++PE ++ Y + D+++ G+IL LL + SK F +R + SD +D
Sbjct: 188 MSPEQISSQDYGKEVDLYALGLILAELLHVCDTAF--ETSKFFTDLRDGII---SDIFD- 241
Query: 269 ISASARDLIMGMLRVDPSTRLTAAEVL 295
+ L+ +L P R +E+L
Sbjct: 242 --KKEKTLLQKLLSKKPEDRPNTSEIL 266
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 16/197 (8%)
Query: 120 MELCAGGELFHRLEKYG--RFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLATK 177
ME C G L +EK + + A +F + + V Y H ++HRDLKP NI L
Sbjct: 113 MEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLV-- 170
Query: 178 SSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAG-GYNQAADVWSAGVILYILL 236
+ +K+ DFGL T +K + G+ Y++PE ++ Y + D+++ G+IL LL
Sbjct: 171 -DTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
Query: 237 SGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVLA 296
+ SK F +R + SD +D + L+ +L P R +E+L
Sbjct: 230 HVCDTAF--ETSKFFTDLRDGII---SDIFD---KKEKTLLQKLLSKKPEDRPNTSEILR 281
Query: 297 --HSWMEECEQVAQKPC 311
W + E+ + C
Sbjct: 282 TLTVWKKSPEKNERHTC 298
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 130/300 (43%), Gaps = 54/300 (18%)
Query: 47 QLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDL 106
++G G FG + + + TG+ +A K + + + +++ EI+I+ +L H NVV+L
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKIL-QLLKHENVVNL 82
Query: 107 KAV-------YEE-EDYVHLLMELCA---GGELFHRLEKYGRFSETEARVIFRHLMQVVS 155
+ Y + ++L+ + C G L + L K F+ +E + + + L+ +
Sbjct: 83 IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK---FTLSEIKRVMQMLLNGLY 139
Query: 156 YCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN-----LHGTVGSPFYI 210
Y H N ++HRD+K N+L+ + +KLADFGLA +N V + +Y
Sbjct: 140 YIHRNKILHRDMKAANVLI---TRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 196
Query: 211 APEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW-- 266
PE+L G Y D+W AG I+ + + P G T+ + + W
Sbjct: 197 PPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPN 256
Query: 267 ---------------------DHISASAR-----DLIMGMLRVDPSTRLTAAEVLAHSWM 300
D + A R DLI +L +DP+ R+ + + L H +
Sbjct: 257 VDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 316
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 35/209 (16%)
Query: 115 YVHLLMELCAGGELFHRLEKYGRFSETEARV---IFRHLMQVVSYCHGNGVVHRDLKPEN 171
Y+++ M+LC L + + + E V IF + + V + H G++HRDLKP N
Sbjct: 135 YLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSN 194
Query: 172 ILLATKSSSSPIKLADFGLATYIKAGQNLH-------------GTVGSPFYIAPEVLAG- 217
I +K+ DFGL T + + G VG+ Y++PE + G
Sbjct: 195 IFFTMDDV---VKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGN 251
Query: 218 GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFP-----SDPWDHISAS 272
Y+ D++S G+IL+ LL + +I VR +L+FP P +H+
Sbjct: 252 NYSHKVDIFSLGLILFELLYSFST--QMERVRIITDVR--NLKFPLLFTQKYPQEHM--- 304
Query: 273 ARDLIMGMLRVDPSTRLTAAEVLAHSWME 301
++ ML P+ R A +++ ++ E
Sbjct: 305 ---MVQDMLSPSPTERPEATDIIENAIFE 330
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 130/300 (43%), Gaps = 54/300 (18%)
Query: 47 QLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDL 106
++G G FG + + + TG+ +A K + + + +++ EI+I+ +L H NVV+L
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKIL-QLLKHENVVNL 82
Query: 107 KAV-------YEE-EDYVHLLMELCA---GGELFHRLEKYGRFSETEARVIFRHLMQVVS 155
+ Y + ++L+ + C G L + L K F+ +E + + + L+ +
Sbjct: 83 IEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVK---FTLSEIKRVMQMLLNGLY 139
Query: 156 YCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN-----LHGTVGSPFYI 210
Y H N ++HRD+K N+L+ + +KLADFGLA +N V + +Y
Sbjct: 140 YIHRNKILHRDMKAANVLI---TRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 196
Query: 211 APEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPW-- 266
PE+L G Y D+W AG I+ + + P G T+ + + W
Sbjct: 197 PPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPN 256
Query: 267 ---------------------DHISASAR-----DLIMGMLRVDPSTRLTAAEVLAHSWM 300
D + A R DLI +L +DP+ R+ + + L H +
Sbjct: 257 VDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 316
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 134/310 (43%), Gaps = 74/310 (23%)
Query: 47 QLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDL 106
++G G FG + + + TG+ +A K + + + +++ EI+I+ +L H NVV+L
Sbjct: 24 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKIL-QLLKHENVVNL 81
Query: 107 KAV-------YEE-EDYVHLLMELCA---GGELFHRLEKYGRFSETEARVIFRHLMQVVS 155
+ Y + ++L+ + C G L + L K F+ +E + + + L+ +
Sbjct: 82 IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK---FTLSEIKRVMQMLLNGLY 138
Query: 156 YCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN-----LHGTVGSPFYI 210
Y H N ++HRD+K N+L+ + +KLADFGLA +N V + +Y
Sbjct: 139 YIHRNKILHRDMKAANVLI---TRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 195
Query: 211 APEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGKT---------------------- 246
PE+L G Y D+W AG I+ + + P G T
Sbjct: 196 PPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPN 255
Query: 247 ----------------KSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLT 290
K K+ D ++A + DP+ A DLI +L +DP+ R+
Sbjct: 256 VDNYELYEKLELVKGQKRKVKDRLKA----YVRDPY------ALDLIDKLLVLDPAQRID 305
Query: 291 AAEVLAHSWM 300
+ + L H +
Sbjct: 306 SDDALNHDFF 315
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 126/294 (42%), Gaps = 34/294 (11%)
Query: 31 DATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRL---VTVEDVRSI 87
DA++ DR LGK LG G FG + E + C+++A L T + R++
Sbjct: 9 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL 68
Query: 88 KLEIEIMTKLSGHPNVVD-LKAVYEEEDYVHLLMELCAGGELFHRLEK------------ 134
E++I+ + H NVV+ L A + + ++ E C G L L
Sbjct: 69 MSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAP 128
Query: 135 ---YGRFSETEARVIFR-HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGL 190
Y F E + + + + + + +HRDL NILL+ K+ +K+ DFGL
Sbjct: 129 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV---VKICDFGL 185
Query: 191 ATYIKAGQNL--HGTVGSPF-YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWGK 245
A I + G P ++APE + Y +DVWS GV+L+ + S G P+ G
Sbjct: 186 ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 245
Query: 246 TKSKIF--DAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAH 297
+ F +R P D+ + ++ +PS R T +E++ H
Sbjct: 246 KIDEEFCRRLKEGTRMRAP----DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 126/294 (42%), Gaps = 34/294 (11%)
Query: 31 DATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRL---VTVEDVRSI 87
DA++ DR LGK LG G FG + E + C+++A L T + R++
Sbjct: 9 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL 68
Query: 88 KLEIEIMTKLSGHPNVVD-LKAVYEEEDYVHLLMELCAGGELFHRLEK------------ 134
E++I+ + H NVV+ L A + + ++ E C G L L
Sbjct: 69 MSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAP 128
Query: 135 ---YGRFSETEARVIFR-HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGL 190
Y F E + + + + + + +HRDL NILL+ K+ +K+ DFGL
Sbjct: 129 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV---VKICDFGL 185
Query: 191 ATYIKAGQNL--HGTVGSPF-YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWGK 245
A I + G P ++APE + Y +DVWS GV+L+ + S G P+ G
Sbjct: 186 ARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 245
Query: 246 TKSKIF--DAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAH 297
+ F +R P D+ + ++ +PS R T +E++ H
Sbjct: 246 KIDEEFCRRLKEGTRMRAP----DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 127/294 (43%), Gaps = 34/294 (11%)
Query: 31 DATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRL---VTVEDVRSI 87
DA++ DR LGK LG G FG + E + C+++A L T + R++
Sbjct: 55 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL 114
Query: 88 KLEIEIMTKLSGHPNVVD-LKAVYEEEDYVHLLMELCAGGELFHRLEK------------ 134
E++I+ + H NVV+ L A + + +++E C G L L
Sbjct: 115 MSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAP 174
Query: 135 ---YGRFSETEARVIFR-HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGL 190
Y F E + + + + + + +HRDL NILL+ K+ +K+ DFGL
Sbjct: 175 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV---VKICDFGL 231
Query: 191 ATYIKAGQNL--HGTVGSPF-YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWGK 245
A I + G P ++APE + Y +DVWS GV+L+ + S G P+ G
Sbjct: 232 ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 291
Query: 246 TKSKIF--DAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAH 297
+ F +R P D+ + ++ +PS R T +E++ H
Sbjct: 292 KIDEEFCRRLKEGTRMRAP----DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 341
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 128/309 (41%), Gaps = 60/309 (19%)
Query: 42 YVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKL------------ 89
Y + + + G +G + D G +A K + TV D R++ +
Sbjct: 24 YTVQRFISSGSYGAVCAGVDS-EGIPVAIKRVFN----TVSDGRTVNILSDSFLCKRVLR 78
Query: 90 EIEIMTKLSGHPNVVDLKAVYE--EEDYVH---LLMELCAG--GELFHRLEKYGRFSETE 142
EI ++ HPN++ L+ ++ EE +H L+ EL ++ H ++ S
Sbjct: 79 EIRLLNHFH-HPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIH--DQRIVISPQH 135
Query: 143 ARVIFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHG 202
+ H++ + H GVVHRDL P NILLA ++ I + DF LA A N
Sbjct: 136 IQYFMYHILLGLHVLHEAGVVHRDLHPGNILLA---DNNDITICDFNLAREDTADANKTH 192
Query: 203 TVGSPFYIAPEVLA--GGYNQAADVWSAGVILYILLSGMPPFWGKT-------------K 247
V +Y APE++ G+ + D+WSAG ++ + + F G T
Sbjct: 193 YVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGT 252
Query: 248 SKIFDAV-----------RAADLRFPSDPWDHISASAR----DLIMGMLRVDPSTRLTAA 292
KI D V R + P+ W + +A DLI ML +P R++
Sbjct: 253 PKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTE 312
Query: 293 EVLAHSWME 301
+ L H + E
Sbjct: 313 QALRHPYFE 321
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 131/317 (41%), Gaps = 60/317 (18%)
Query: 34 QISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKL---- 89
++ + Y + + + G +G + D G +A K + TV D R++ +
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDS-EGIPVAIKRVFN----TVSDGRTVNILSDS 70
Query: 90 --------EIEIMTKLSGHPNVVDLKAVYE--EEDYVH---LLMELCAG--GELFHRLEK 134
EI ++ HPN++ L+ ++ EE +H L+ EL ++ H ++
Sbjct: 71 FLCKRVLREIRLLNHFH-HPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIH--DQ 127
Query: 135 YGRFSETEARVIFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYI 194
S + H++ + H GVVHRDL P NILLA ++ I + DF LA
Sbjct: 128 RIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLA---DNNDITICDFNLARED 184
Query: 195 KAGQNLHGTVGSPFYIAPEVLA--GGYNQAADVWSAGVILYILLSGMPPFWGKT------ 246
A N V +Y APE++ G+ + D+WSAG ++ + + F G T
Sbjct: 185 TADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLN 244
Query: 247 -------KSKIFDAV-----------RAADLRFPSDPWDHISASAR----DLIMGMLRVD 284
KI D V R + P+ W + +A DLI ML +
Sbjct: 245 KIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFN 304
Query: 285 PSTRLTAAEVLAHSWME 301
P R++ + L H + E
Sbjct: 305 PQRRISTEQALRHPYFE 321
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 97/205 (47%), Gaps = 22/205 (10%)
Query: 47 QLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG--HPNVV 104
+LG G FG + DK TG C V+ VR +E + +G P +V
Sbjct: 79 RLGRGSFGEVHRMKDKQTG--FQC---------AVKKVRLEVFRVEELVACAGLSSPRIV 127
Query: 105 DLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVH 164
L E +V++ MEL GG L +++ G E A ++ + Y H ++H
Sbjct: 128 PLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILH 187
Query: 165 RDLKPENILLATKSSSSPIKLADFGLATYIKA---GQNL---HGTVGSPFYIAPEVLAGG 218
D+K +N+LL++ S + L DFG A ++ G++L G+ ++APEV+ G
Sbjct: 188 GDVKADNVLLSSDGSRA--ALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK 245
Query: 219 YNQA-ADVWSAGVILYILLSGMPPF 242
A D+WS+ ++ +L+G P+
Sbjct: 246 PCDAKVDIWSSCCMMLHMLNGCHPW 270
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 104/225 (46%), Gaps = 13/225 (5%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRL-VTVEDVRSIKLEIEIMTKLSGHPNVV 104
K +G G+FG + K G+ C +I + T + R E IM + HPN++
Sbjct: 35 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFD-HPNII 93
Query: 105 DLKAVYEEEDYVHLLMELCAGGELFHRLEKY-GRFSETEARVIFRHLMQVVSYCHGNGVV 163
L+ V + V ++ E G L L K GRF+ + + R + + Y V
Sbjct: 94 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSAV 153
Query: 164 HRDLKPENILLATKSSSSPIKLADFGLATYI----KAGQNLHGTVGSPFYIAPEVLA-GG 218
HRDL NIL+ +S+ K++DFG++ + +A G + APE +A
Sbjct: 154 HRDLAARNILV---NSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK 210
Query: 219 YNQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAVRAADLRFP 262
+ A+DVWS G++++ ++S G P+W + + A+ R P
Sbjct: 211 FTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG-YRLP 254
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 125/278 (44%), Gaps = 42/278 (15%)
Query: 11 QLSTQFCNSYKVSSLTGTILDATQI----------SNLSDRYVLGKQLGWGQFGVIRECS 60
Q+ + SY+ +S T +D TQ+ +NL GK LG G FG + E +
Sbjct: 13 QVRWKIIESYEGNSYT--FIDPTQLPYNEKWEFPRNNLQ----FGKTLGAGAFGKVVEAT 66
Query: 61 DKFTGEVLACKSIAKDRLVTV---EDVRSIKLEIEIMTKLSGHPNVVDLKAVYEEEDYVH 117
G+ A +A L + ++ ++ E++IM+ L H N+V+L V
Sbjct: 67 AFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVL 126
Query: 118 LLMELCAGGELFHRLEKYGRFSETEARVIF-------RHLM-------QVVSYCHGNGVV 163
++ E C G+L + L + R ET+ R L+ Q +++ +
Sbjct: 127 VITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCI 186
Query: 164 HRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN--LHGTVGSPF-YIAPE-VLAGGY 219
HRD+ N+LL ++ K+ DFGLA I N + G P ++APE + Y
Sbjct: 187 HRDVAARNVLL---TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVY 243
Query: 220 NQAADVWSAGVILYILLS-GMPPFWG-KTKSKIFDAVR 255
+DVWS G++L+ + S G+ P+ G SK + V+
Sbjct: 244 TVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK 281
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 126/294 (42%), Gaps = 34/294 (11%)
Query: 31 DATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRL---VTVEDVRSI 87
DA++ DR LGK LG G FG + E + C+++A L T + R++
Sbjct: 9 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL 68
Query: 88 KLEIEIMTKLSGHPNVVD-LKAVYEEEDYVHLLMELCAGGELFHRLEK------------ 134
E++I+ + H NVV+ L A + + ++ E C G L L
Sbjct: 69 MSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAP 128
Query: 135 ---YGRFSETEARVIFR-HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGL 190
Y F E + + + + + + +HRDL NILL+ K+ +K+ DFGL
Sbjct: 129 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV---VKICDFGL 185
Query: 191 ATYIKAGQNL--HGTVGSPF-YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWGK 245
A I + G P ++APE + Y +DVWS GV+L+ + S G P+ G
Sbjct: 186 ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 245
Query: 246 TKSKIF--DAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAH 297
+ F +R P D+ + ++ +PS R T +E++ H
Sbjct: 246 KIDEEFCRRLKEGTRMRAP----DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 101/208 (48%), Gaps = 19/208 (9%)
Query: 43 VLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRS-IKLEIEIMTKLSGHP 101
V G ++G G FGV+ + +A K +A +T E+++ EI++M K H
Sbjct: 34 VGGNKMGEGGFGVVYK--GYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ-HE 90
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRL---EKYGRFSETEARVIFRHLMQVVSYCH 158
N+V+L + D + L+ G L RL + S I + +++ H
Sbjct: 91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH 150
Query: 159 GNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTV------GSPFYIAP 212
N +HRD+K NILL ++ K++DFGLA +A + TV G+ Y+AP
Sbjct: 151 ENHHIHRDIKSANILLDEAFTA---KISDFGLA---RASEKFAQTVMXSRIVGTTAYMAP 204
Query: 213 EVLAGGYNQAADVWSAGVILYILLSGMP 240
E L G +D++S GV+L +++G+P
Sbjct: 205 EALRGEITPKSDIYSFGVVLLEIITGLP 232
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 101/208 (48%), Gaps = 19/208 (9%)
Query: 43 VLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRS-IKLEIEIMTKLSGHP 101
V G ++G G FGV+ + +A K +A +T E+++ EI++M K H
Sbjct: 34 VGGNKMGEGGFGVVYKGY--VNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ-HE 90
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRL---EKYGRFSETEARVIFRHLMQVVSYCH 158
N+V+L + D + L+ G L RL + S I + +++ H
Sbjct: 91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH 150
Query: 159 GNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTV------GSPFYIAP 212
N +HRD+K NILL ++ K++DFGLA +A + TV G+ Y+AP
Sbjct: 151 ENHHIHRDIKSANILLDEAFTA---KISDFGLA---RASEKFAQTVMXXRIVGTTAYMAP 204
Query: 213 EVLAGGYNQAADVWSAGVILYILLSGMP 240
E L G +D++S GV+L +++G+P
Sbjct: 205 EALRGEITPKSDIYSFGVVLLEIITGLP 232
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 123/274 (44%), Gaps = 34/274 (12%)
Query: 11 QLSTQFCNSYKVSSLTGTILDATQISN------LSDRYVLGKQLGWGQFGVIRECSDKFT 64
Q+ + SY+ +S T +D TQ+ + GK LG G FG + E +
Sbjct: 13 QVRWKIIESYEGNSYT--FIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGL 70
Query: 65 GEVLACKSIAKDRLVTV---EDVRSIKLEIEIMTKLSGHPNVVDLKAVYEEEDYVHLLME 121
G+ A +A L + ++ ++ E++IM+ L H N+V+L V ++ E
Sbjct: 71 GKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 130
Query: 122 LCAGGELFHRLEKYGRFSETEARVIF-------RHLM-------QVVSYCHGNGVVHRDL 167
C G+L + L + R ET+ R L+ Q +++ +HRD+
Sbjct: 131 YCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDV 190
Query: 168 KPENILLATKSSSSPIKLADFGLATYIKAGQN--LHGTVGSPF-YIAPE-VLAGGYNQAA 223
N+LL ++ K+ DFGLA I N + G P ++APE + Y +
Sbjct: 191 AARNVLL---TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQS 247
Query: 224 DVWSAGVILYILLS-GMPPFWG-KTKSKIFDAVR 255
DVWS G++L+ + S G+ P+ G SK + V+
Sbjct: 248 DVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK 281
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 84/178 (47%), Gaps = 34/178 (19%)
Query: 90 EIEIMTKLSGHPNVVDLKAV--------------YEEEDYVHLLMELCAGGELFHRLEKY 135
EI ++ +L HPNV+ L+ V Y E D H++ FHR K
Sbjct: 68 EIALLRELK-HPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIK--------FHRASKA 118
Query: 136 GRFSETEARVIFRHLM-QV---VSYCHGNGVVHRDLKPENIL-LATKSSSSPIKLADFGL 190
+ R + + L+ Q+ + Y H N V+HRDLKP NIL + +K+AD G
Sbjct: 119 NKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF 178
Query: 191 A----TYIKAGQNLHGTVGSPFYIAPEVLAGG--YNQAADVWSAGVILYILLSGMPPF 242
A + +K +L V + +Y APE+L G Y +A D+W+ G I LL+ P F
Sbjct: 179 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 236
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 104/225 (46%), Gaps = 13/225 (5%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRL-VTVEDVRSIKLEIEIMTKLSGHPNVV 104
K +G G+FG + K G+ C +I + T + R E IM + HPN++
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFD-HPNII 72
Query: 105 DLKAVYEEEDYVHLLMELCAGGELFHRLEKY-GRFSETEARVIFRHLMQVVSYCHGNGVV 163
L+ V + V ++ E G L L K GRF+ + + R + + Y V
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYV 132
Query: 164 HRDLKPENILLATKSSSSPIKLADFGLATYI----KAGQNLHGTVGSPFYIAPEVLA-GG 218
HRDL NIL+ +S+ K++DFG++ + +A G + APE +A
Sbjct: 133 HRDLAARNILV---NSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK 189
Query: 219 YNQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAVRAADLRFP 262
+ A+DVWS G++++ ++S G P+W + + A+ R P
Sbjct: 190 FTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG-YRLP 233
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 104/225 (46%), Gaps = 13/225 (5%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRL-VTVEDVRSIKLEIEIMTKLSGHPNVV 104
K +G G+FG + K G+ C +I + T + R E IM + HPN++
Sbjct: 20 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFD-HPNII 78
Query: 105 DLKAVYEEEDYVHLLMELCAGGELFHRLEKY-GRFSETEARVIFRHLMQVVSYCHGNGVV 163
L+ V + V ++ E G L L K GRF+ + + R + + Y V
Sbjct: 79 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYV 138
Query: 164 HRDLKPENILLATKSSSSPIKLADFGLATYI----KAGQNLHGTVGSPFYIAPEVLA-GG 218
HRDL NIL+ +S+ K++DFG++ + +A G + APE +A
Sbjct: 139 HRDLAARNILV---NSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK 195
Query: 219 YNQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAVRAADLRFP 262
+ A+DVWS G++++ ++S G P+W + + A+ R P
Sbjct: 196 FTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG-YRLP 239
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 101/214 (47%), Gaps = 18/214 (8%)
Query: 47 QLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDL 106
+LG GQ+G + K +A K++ +D + +V E +M ++ HPN+V L
Sbjct: 39 KLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQL 93
Query: 107 KAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVS---YCHGNGVV 163
V E +++ E G L L + R E A V+ Q+ S Y +
Sbjct: 94 LGVCTLEPPFYIVTEYMPYGNLLDYLRECNR-EEVTAVVLLYMATQISSAMEYLEKKNFI 152
Query: 164 HRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF---YIAPEVLA-GGY 219
HRDL N L+ + +K+ADFGL+ + G G+ F + APE LA +
Sbjct: 153 HRDLAARNCLVG---ENHVVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNTF 208
Query: 220 NQAADVWSAGVILY-ILLSGMPPFWGKTKSKIFD 252
+ +DVW+ GV+L+ I GM P+ G S+++D
Sbjct: 209 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYD 242
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 102/216 (47%), Gaps = 20/216 (9%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
DRY + +G G FG + + D+ E +A K I + + ++E+ ++ ++
Sbjct: 54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAF----LNQAQIEVRLLELMNK 109
Query: 100 HPN-----VVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVV 154
H +V LK + +++ L+ E+ + + L + F + + Q+
Sbjct: 110 HDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYN--LYDLLRNTNFRGVSLNLTRKFAQQMC 167
Query: 155 SY-----CHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFY 209
+ ++H DLKPENILL + IK+ DFG + + GQ ++ + S FY
Sbjct: 168 TALLFLATPELSIIHCDLKPENILLCNPKRXA-IKIVDFG--SSCQLGQRIYQXIQSRFY 224
Query: 210 IAPEVLAG-GYNQAADVWSAGVILYILLSGMPPFWG 244
+PEVL G Y+ A D+WS G IL + +G P F G
Sbjct: 225 RSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSG 260
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 111/236 (47%), Gaps = 20/236 (8%)
Query: 48 LGWGQFGVIRECSDKFTGE---VLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVV 104
+G G+FG + K G+ +A K++ T + R E IM + HPNV+
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSG--YTEKQRRDFLSEASIMGQFD-HPNVI 97
Query: 105 DLKAVYEEEDYVHLLMELCAGGELFHRLEKY-GRFSETEARVIFRHLMQVVSYCHGNGVV 163
L+ V + V ++ E G L L + G+F+ + + R + + Y V
Sbjct: 98 HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYV 157
Query: 164 HRDLKPENILLATKSSSSPIKLADFGLATYIK---AGQNLHGTVGSPFYI---APEVLA- 216
HRDL NIL+ +S+ K++DFGL+ +++ + +G I APE +
Sbjct: 158 HRDLAARNILV---NSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQY 214
Query: 217 GGYNQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISA 271
+ A+DVWS G++++ ++S G P+W T + +A+ D R P P D SA
Sbjct: 215 RKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIE-QDYRLPP-PMDCPSA 268
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 137/328 (41%), Gaps = 83/328 (25%)
Query: 53 FGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIK-------LEIEIMTKLSGHPNVVD 105
F VIR+ D G VL C+ I + V+ VR+IK +E +I+ K+ +
Sbjct: 37 FLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNN 96
Query: 106 LKAVYEEE----DYVHLLMELCAGGELFHRLEK--YGRFSETEARVIFRHLMQVVSYCHG 159
Y + D++ L+ E G L+ + + Y F + ++ +++ ++Y
Sbjct: 97 NIVKYHGKFMYYDHMCLIFE-PLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRK 155
Query: 160 NGVVHRDLKPENILL----------------------ATKSSSSPIKLADFGLATYIKAG 197
+ H DLKPENILL ++ S+ IKL DFG AT+
Sbjct: 156 MSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATF---K 212
Query: 198 QNLHGT-VGSPFYIAPEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGK---------- 245
+ HG+ + + Y APEV+ G++ ++D+WS G +L L +G F
Sbjct: 213 SDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMME 272
Query: 246 ------TKSKIFDAVRAADLRFPSD-----PWDHISASAR-------------------- 274
K+ +++A + ++ + W ++S
Sbjct: 273 SIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELF 332
Query: 275 -DLIMGMLRVDPSTRLTAAEVLAHSWME 301
D + +L++DP+ R + AE+L H ++E
Sbjct: 333 CDFLYSILQIDPTLRPSPAELLKHKFLE 360
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 97/205 (47%), Gaps = 22/205 (10%)
Query: 47 QLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG--HPNVV 104
++G G FG + DK TG C V+ VR +E + +G P +V
Sbjct: 65 RVGRGSFGEVHRMKDKQTG--FQC---------AVKKVRLEVFRVEELVACAGLSSPRIV 113
Query: 105 DLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVH 164
L E +V++ MEL GG L +++ G E A ++ + Y H ++H
Sbjct: 114 PLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILH 173
Query: 165 RDLKPENILLATKSSSSPIKLADFGLATYIKA---GQNL---HGTVGSPFYIAPEVLAGG 218
D+K +N+LL++ S + L DFG A ++ G++L G+ ++APEV+ G
Sbjct: 174 GDVKADNVLLSSDGSRA--ALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK 231
Query: 219 YNQA-ADVWSAGVILYILLSGMPPF 242
A D+WS+ ++ +L+G P+
Sbjct: 232 PCDAKVDIWSSCCMMLHMLNGCHPW 256
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 117/265 (44%), Gaps = 19/265 (7%)
Query: 47 QLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDL 106
+LG G +GV+ + +G+++A K I V ++ + + ++++I + P V
Sbjct: 58 ELGRGAYGVVEKMRHVPSGQIMAVKRIRA--TVNSQEQKRLLMDLDISMRTVDCPFTVTF 115
Query: 107 KAVYEEEDYVHLLMELCAGG-ELFHR--LEKYGRFSETEARVIFRHLMQVVSYCHGN-GV 162
E V + MEL + F++ ++K E I +++ + + H V
Sbjct: 116 YGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV 175
Query: 163 VHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVL-----AG 217
+HRD+KP N+L+ ++ +K+ DFG++ Y+ G Y+APE +
Sbjct: 176 IHRDVKPSNVLI---NALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQK 232
Query: 218 GYNQAADVWSAGVILYILLSGMPPF--WGKTKSKIFDAVRAADLRFPSDPWDHISASARD 275
GY+ +D+WS G+ + L P+ WG ++ V P P D SA D
Sbjct: 233 GYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPS---PQLPADKFSAEFVD 289
Query: 276 LIMGMLRVDPSTRLTAAEVLAHSWM 300
L+ + R T E++ H +
Sbjct: 290 FTSQCLKKNSKERPTYPELMQHPFF 314
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 141/356 (39%), Gaps = 94/356 (26%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKL 97
+ D Y + +G G +G + DK + +A K + + + D + I EI I+ +L
Sbjct: 26 VPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNR-MFEDLIDCKRILREITILNRL 84
Query: 98 SGHPNVVDLKAVYEEEDYV-----HLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQ 152
++ L + ED + ++++E+ A +L + +E + I +L+
Sbjct: 85 KSD-YIIRLHDLIIPEDLLKFDELYIVLEI-ADSDLKKLFKTPIFLTEQHVKTILYNLLL 142
Query: 153 VVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLH----------- 201
+ H +G++HRDLKP N LL S +K+ DFGLA I + +++H
Sbjct: 143 GEKFIHESGIIHRDLKPANCLLNQDCS---VKICDFGLARTINSDKDIHIVNDLEEKEEN 199
Query: 202 ---------------GTVGSPFYIAPE--VLAGGYNQAADVWSAGVILYILLSGM----- 239
V + +Y APE +L Y + D+WS G I LL+ M
Sbjct: 200 EEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHIN 259
Query: 240 ------PPFWGKT--------KSK-------------IFDAVRAA---DLR--------- 260
P F G + SK IF+ + DL+
Sbjct: 260 NPTNRFPLFPGSSCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEEDLKCITKQEVIK 319
Query: 261 ----FP-------SDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQ 305
FP S + IS DL+ MLR + R+T + L+H ++++ +
Sbjct: 320 YIKLFPTRDGIDLSKKYSSISKEGIDLLESMLRFNAQKRITIDKALSHPYLKDVRK 375
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 97/205 (47%), Gaps = 22/205 (10%)
Query: 47 QLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG--HPNVV 104
++G G FG + DK TG C V+ VR +E + +G P +V
Sbjct: 81 RVGRGSFGEVHRMKDKQTG--FQC---------AVKKVRLEVFRVEELVACAGLSSPRIV 129
Query: 105 DLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGNGVVH 164
L E +V++ MEL GG L +++ G E A ++ + Y H ++H
Sbjct: 130 PLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILH 189
Query: 165 RDLKPENILLATKSSSSPIKLADFGLATYIKA---GQNL---HGTVGSPFYIAPEVLAGG 218
D+K +N+LL++ S + L DFG A ++ G++L G+ ++APEV+ G
Sbjct: 190 GDVKADNVLLSSDGSRA--ALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK 247
Query: 219 YNQA-ADVWSAGVILYILLSGMPPF 242
A D+WS+ ++ +L+G P+
Sbjct: 248 PCDAKVDIWSSCCMMLHMLNGCHPW 272
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 117/264 (44%), Gaps = 19/264 (7%)
Query: 47 QLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDL 106
+LG G +GV+ + +G+++A K I V ++ + + ++++I + P V
Sbjct: 14 ELGRGAYGVVEKMRHVPSGQIMAVKRIRA--TVNSQEQKRLLMDLDISMRTVDCPFTVTF 71
Query: 107 KAVYEEEDYVHLLMELCAGG-ELFHR--LEKYGRFSETEARVIFRHLMQVVSYCHGN-GV 162
E V + MEL + F++ ++K E I +++ + + H V
Sbjct: 72 YGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV 131
Query: 163 VHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVL-----AG 217
+HRD+KP N+L+ ++ +K+ DFG++ Y+ G Y+APE +
Sbjct: 132 IHRDVKPSNVLI---NALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQK 188
Query: 218 GYNQAADVWSAGVILYILLSGMPPF--WGKTKSKIFDAVRAADLRFPSDPWDHISASARD 275
GY+ +D+WS G+ + L P+ WG ++ V P P D SA D
Sbjct: 189 GYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPS---PQLPADKFSAEFVD 245
Query: 276 LIMGMLRVDPSTRLTAAEVLAHSW 299
L+ + R T E++ H +
Sbjct: 246 FTSQCLKKNSKERPTYPELMQHPF 269
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 127/292 (43%), Gaps = 32/292 (10%)
Query: 31 DATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRL---VTVEDVRSI 87
DA++ DR LGK LG G FG + E + +++A L T + R++
Sbjct: 20 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRAL 79
Query: 88 KLEIEIMTKLSGHPNVVD-LKAVYEEEDYVHLLMELCAGGELFHRLE-KYGRFSETEARV 145
E++I+ + H NVV+ L A + + +++E C G L L K F +
Sbjct: 80 MSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPED 139
Query: 146 IFRHLMQV-------------VSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLAT 192
+++ + + + + +HRDL NILL+ K+ +K+ DFGLA
Sbjct: 140 LYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNV---VKICDFGLAR 196
Query: 193 YIKAGQNL--HGTVGSPF-YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWGKTK 247
I + G P ++APE + Y +DVWS GV+L+ + S G P+ G
Sbjct: 197 DIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 256
Query: 248 SKIF--DAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAH 297
+ F +R P D+ + ++ +PS R T +E++ H
Sbjct: 257 DEEFCRRLKEGTRMRAP----DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 108/243 (44%), Gaps = 31/243 (12%)
Query: 40 DRYVLGKQLGWGQFG--VIREC----SDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEI 93
D+ LGK LG G FG V+ E DK V + KD T ED+ + E+E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEEDLSDLVSEMEM 93
Query: 94 MTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLE---------KYGRFSETEAR 144
M + H N+++L ++ +++++E + G L L Y E +
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 145 VIFRHLMQV-------VSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAG 197
+ F+ L+ + Y +HRDL N+L+ + ++ +K+ADFGLA I
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINNI 210
Query: 198 QNLHGTVGSPF---YIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGKTKSKIFD 252
T ++APE L Y +DVWS GV+++ I G P+ G ++F
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 270
Query: 253 AVR 255
++
Sbjct: 271 LLK 273
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 100/205 (48%), Gaps = 13/205 (6%)
Query: 43 VLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRS-IKLEIEIMTKLSGHP 101
V G ++G G FGV+ + +A K +A +T E+++ EI++M K H
Sbjct: 28 VGGNKMGEGGFGVVYK--GYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ-HE 84
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRL---EKYGRFSETEARVIFRHLMQVVSYCH 158
N+V+L + D + L+ G L RL + S I + +++ H
Sbjct: 85 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH 144
Query: 159 GNGVVHRDLKPENILLATKSSSSPIKLADFGLA-TYIKAGQNLHGT--VGSPFYIAPEVL 215
N +HRD+K NILL ++ K++DFGLA K Q + VG+ Y+APE L
Sbjct: 145 ENHHIHRDIKSANILLDEAFTA---KISDFGLARASEKFAQXVMXXRIVGTTAYMAPEAL 201
Query: 216 AGGYNQAADVWSAGVILYILLSGMP 240
G +D++S GV+L +++G+P
Sbjct: 202 RGEITPKSDIYSFGVVLLEIITGLP 226
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 29/236 (12%)
Query: 31 DATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLE 90
DA +I S + V K+LG GQFG + + +V A K++ + V++ E
Sbjct: 6 DAWEIPRESIKLV--KRLGAGQFGEVWMGYYNNSTKV-AVKTLKPGTM----SVQAFLEE 58
Query: 91 IEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHL 150
+M L H +V L AV E+ ++++ E A G L L+ S+ +V+ L
Sbjct: 59 ANLMKTLQ-HDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLK-----SDEGGKVLLPKL 112
Query: 151 MQV-------VSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGT 203
+ ++Y +HRDL+ N+L+ S S K+ADFGLA I+ +
Sbjct: 113 IDFSAQIAEGMAYIERKNYIHRDLRAANVLV---SESLMCKIADFGLARVIEDNE-YTAR 168
Query: 204 VGSPF---YIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGKTKSKIFDAV 254
G+ F + APE + G + +DVWS G++LY I+ G P+ G+T + + A+
Sbjct: 169 EGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTAL 224
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 122/271 (45%), Gaps = 34/271 (12%)
Query: 48 LGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLK 107
+G G FG + + K G + + +D R E+E++ KL HPN+++L
Sbjct: 23 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 82
Query: 108 AVYEEEDYVHLLMELCAGGELFHRLEK---------YGRFSETEARVIFRHLMQVVS--- 155
E Y++L +E G L L K + + T + + + L+ +
Sbjct: 83 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 142
Query: 156 ----YCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLH--GTVGS-PF 208
Y +HRDL NIL+ + K+ADFGL+ GQ ++ T+G P
Sbjct: 143 RGMDYLSQKQFIHRDLAARNILVGENYVA---KIADFGLSR----GQEVYVKKTMGRLPV 195
Query: 209 -YIAPEVLAGG-YNQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAV-RAADLRFPSD 264
++A E L Y +DVWS GV+L+ ++S G P+ G T +++++ + + L P +
Sbjct: 196 RWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLN 255
Query: 265 PWDHISASARDLIMGMLRVDPSTRLTAAEVL 295
D + DL+ R P R + A++L
Sbjct: 256 CDDEVY----DLMRQCWREKPYERPSFAQIL 282
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 122/271 (45%), Gaps = 34/271 (12%)
Query: 48 LGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLK 107
+G G FG + + K G + + +D R E+E++ KL HPN+++L
Sbjct: 33 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 92
Query: 108 AVYEEEDYVHLLMELCAGGELFHRLEK---------YGRFSETEARVIFRHLMQVVS--- 155
E Y++L +E G L L K + + T + + + L+ +
Sbjct: 93 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 152
Query: 156 ----YCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLH--GTVGS-PF 208
Y +HRDL NIL+ + K+ADFGL+ GQ ++ T+G P
Sbjct: 153 RGMDYLSQKQFIHRDLAARNILVGENYVA---KIADFGLSR----GQEVYVKKTMGRLPV 205
Query: 209 -YIAPEVLAGG-YNQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAV-RAADLRFPSD 264
++A E L Y +DVWS GV+L+ ++S G P+ G T +++++ + + L P +
Sbjct: 206 RWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLN 265
Query: 265 PWDHISASARDLIMGMLRVDPSTRLTAAEVL 295
D + DL+ R P R + A++L
Sbjct: 266 CDDEVY----DLMRQCWREKPYERPSFAQIL 292
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 126/290 (43%), Gaps = 30/290 (10%)
Query: 31 DATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRL---VTVEDVRSI 87
DA++ DR LGK LG G FG + E + +++A L T + R++
Sbjct: 18 DASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRAL 77
Query: 88 KLEIEIMTKLSGHPNVVD-LKAVYEEEDYVHLLMELCAGGELFHRLEK-----------Y 135
E++I+ + H NVV+ L A + + +++E C G L L Y
Sbjct: 78 MSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLY 137
Query: 136 GRFSETEARVIFR-HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYI 194
F E + + + + + + +HRDL NILL+ K+ +K+ DFGLA I
Sbjct: 138 KDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNV---VKICDFGLARDI 194
Query: 195 KAGQNL--HGTVGSPF-YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWGKTKSK 249
+ G P ++APE + Y +DVWS GV+L+ + S G P+ G +
Sbjct: 195 YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 254
Query: 250 IF--DAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAH 297
F +R P D+ + ++ +PS R T +E++ H
Sbjct: 255 EFCRRLKEGTRMRAP----DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 300
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 103/200 (51%), Gaps = 12/200 (6%)
Query: 47 QLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDL 106
+LG G GV+ + S K +G V+A K I + + + I E++++ + + P +V
Sbjct: 75 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN--QIIRELQVLHECNS-PYIVGF 131
Query: 107 KAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCH-GNGVVHR 165
+ + + + ME GG L L+K GR E + +++ ++Y + ++HR
Sbjct: 132 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 191
Query: 166 DLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAGG-YNQAAD 224
D+KP NIL+ ++ IKL DFG++ + + VG+ Y++PE L G Y+ +D
Sbjct: 192 DVKPSNILVNSRGE---IKLCDFGVSGQL-IDSMANSFVGTRSYMSPERLQGTHYSVQSD 247
Query: 225 VWSAGVILYILLSG---MPP 241
+WS G+ L + G +PP
Sbjct: 248 IWSMGLSLVEMAVGRYPIPP 267
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 108/243 (44%), Gaps = 31/243 (12%)
Query: 40 DRYVLGKQLGWGQFG--VIREC----SDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEI 93
D+ LGK LG G FG V+ E DK V + KD T +D+ + E+E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEM 93
Query: 94 MTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLE---------KYGRFSETEAR 144
M + H N+++L ++ +++++E + G L L Y E +
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQ 153
Query: 145 VIFRHLMQV-------VSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAG 197
+ F+ L+ + Y +HRDL N+L+ + ++ +K+ADFGLA I
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINNI 210
Query: 198 QNLHGTVGSPF---YIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGKTKSKIFD 252
T ++APE L Y +DVWS GV+++ I G P+ G ++F
Sbjct: 211 DXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 270
Query: 253 AVR 255
++
Sbjct: 271 LLK 273
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 122/270 (45%), Gaps = 30/270 (11%)
Query: 11 QLSTQFCNSYKVSSLTGTILDATQISN------LSDRYVLGKQLGWGQFGVIRECSDKFT 64
Q+ + SY+ +S T +D TQ+ + GK LG G FG + E +
Sbjct: 13 QVRWKIIESYEGNSYT--FIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGL 70
Query: 65 GEVLACKSIAKDRLVTV---EDVRSIKLEIEIMTKLSGHPNVVDLKAVYEEEDYVHLLME 121
G+ A +A L + ++ ++ E++IM+ L H N+V+L V ++ E
Sbjct: 71 GKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 130
Query: 122 LCAGGELFHRLEKY---------GRFSETEARVIF-RHLMQVVSYCHGNGVVHRDLKPEN 171
C G+L + L + GR E + F + Q +++ +HRD+ N
Sbjct: 131 YCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARN 190
Query: 172 ILLATKSSSSPIKLADFGLATYIKAGQN--LHGTVGSPF-YIAPE-VLAGGYNQAADVWS 227
+LL ++ K+ DFGLA I N + G P ++APE + Y +DVWS
Sbjct: 191 VLL---TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWS 247
Query: 228 AGVILYILLS-GMPPFWG-KTKSKIFDAVR 255
G++L+ + S G+ P+ G SK + V+
Sbjct: 248 YGILLWEIFSLGLNPYPGILVNSKFYKLVK 277
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 108/243 (44%), Gaps = 31/243 (12%)
Query: 40 DRYVLGKQLGWGQFG--VIREC----SDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEI 93
D+ LGK LG G FG V+ E DK V + KD T +D+ + E+E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEM 93
Query: 94 MTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLE---------KYGRFSETEAR 144
M + H N+++L ++ +++++E + G L L Y E +
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 145 VIFRHLMQV-------VSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAG 197
+ F+ L+ + Y +HRDL N+L+ + ++ +K+ADFGLA I
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINNI 210
Query: 198 QNLHGTVGSPF---YIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGKTKSKIFD 252
T ++APE L Y +DVWS GV+++ I G P+ G ++F
Sbjct: 211 DXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 270
Query: 253 AVR 255
++
Sbjct: 271 LLK 273
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 108/243 (44%), Gaps = 31/243 (12%)
Query: 40 DRYVLGKQLGWGQFG--VIREC----SDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEI 93
D+ LGK LG G FG V+ E DK V + KD T +D+ + E+E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEM 93
Query: 94 MTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLE---------KYGRFSETEAR 144
M + H N+++L ++ +++++E + G L L Y E +
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 145 VIFRHLMQV-------VSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAG 197
+ F+ L+ + Y +HRDL N+L+ + ++ +K+ADFGLA I
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINNI 210
Query: 198 QNLHGTVGSPF---YIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGKTKSKIFD 252
T ++APE L Y +DVWS GV+++ I G P+ G ++F
Sbjct: 211 DYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 270
Query: 253 AVR 255
++
Sbjct: 271 LLK 273
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 122/270 (45%), Gaps = 30/270 (11%)
Query: 11 QLSTQFCNSYKVSSLTGTILDATQISN------LSDRYVLGKQLGWGQFGVIRECSDKFT 64
Q+ + SY+ +S T +D TQ+ + GK LG G FG + E +
Sbjct: 5 QVRWKIIESYEGNSYT--FIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGL 62
Query: 65 GEVLACKSIAKDRLVTV---EDVRSIKLEIEIMTKLSGHPNVVDLKAVYEEEDYVHLLME 121
G+ A +A L + ++ ++ E++IM+ L H N+V+L V ++ E
Sbjct: 63 GKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 122
Query: 122 LCAGGELFHRLEKY---------GRFSETEARVIF-RHLMQVVSYCHGNGVVHRDLKPEN 171
C G+L + L + GR E + F + Q +++ +HRD+ N
Sbjct: 123 YCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARN 182
Query: 172 ILLATKSSSSPIKLADFGLATYIKAGQN--LHGTVGSPF-YIAPE-VLAGGYNQAADVWS 227
+LL ++ K+ DFGLA I N + G P ++APE + Y +DVWS
Sbjct: 183 VLL---TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWS 239
Query: 228 AGVILYILLS-GMPPFWG-KTKSKIFDAVR 255
G++L+ + S G+ P+ G SK + V+
Sbjct: 240 YGILLWEIFSLGLNPYPGILVNSKFYKLVK 269
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 103/200 (51%), Gaps = 12/200 (6%)
Query: 47 QLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDL 106
+LG G GV+ + S K +G V+A K I + + + I E++++ + + P +V
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN--QIIRELQVLHECNS-PYIVGF 69
Query: 107 KAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCH-GNGVVHR 165
+ + + + ME GG L L+K GR E + +++ ++Y + ++HR
Sbjct: 70 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 129
Query: 166 DLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAGG-YNQAAD 224
D+KP NIL+ ++ IKL DFG++ + + VG+ Y++PE L G Y+ +D
Sbjct: 130 DVKPSNILVNSRGE---IKLCDFGVSGQL-IDSMANSFVGTRSYMSPERLQGTHYSVQSD 185
Query: 225 VWSAGVILYILLSG---MPP 241
+WS G+ L + G +PP
Sbjct: 186 IWSMGLSLVEMAVGRYPIPP 205
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 103/200 (51%), Gaps = 12/200 (6%)
Query: 47 QLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDL 106
+LG G GV+ + S K +G V+A K I + + + I E++++ + + P +V
Sbjct: 40 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN--QIIRELQVLHECNS-PYIVGF 96
Query: 107 KAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCH-GNGVVHR 165
+ + + + ME GG L L+K GR E + +++ ++Y + ++HR
Sbjct: 97 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 156
Query: 166 DLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAGG-YNQAAD 224
D+KP NIL+ ++ IKL DFG++ + + VG+ Y++PE L G Y+ +D
Sbjct: 157 DVKPSNILVNSRGE---IKLCDFGVSGQL-IDSMANSFVGTRSYMSPERLQGTHYSVQSD 212
Query: 225 VWSAGVILYILLSG---MPP 241
+WS G+ L + G +PP
Sbjct: 213 IWSMGLSLVEMAVGRYPIPP 232
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 126/290 (43%), Gaps = 30/290 (10%)
Query: 31 DATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRL---VTVEDVRSI 87
DA++ DR LGK LG G FG + E + +++A L T + R++
Sbjct: 18 DASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRAL 77
Query: 88 KLEIEIMTKLSGHPNVVD-LKAVYEEEDYVHLLMELCAGGELFHRLEK-----------Y 135
E++I+ + H NVV+ L A + + +++E C G L L Y
Sbjct: 78 MSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLY 137
Query: 136 GRFSETEARVIFR-HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYI 194
F E + + + + + + +HRDL NILL+ K+ +K+ DFGLA I
Sbjct: 138 KDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNV---VKIXDFGLARDI 194
Query: 195 KAGQNL--HGTVGSPF-YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWGKTKSK 249
+ G P ++APE + Y +DVWS GV+L+ + S G P+ G +
Sbjct: 195 YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 254
Query: 250 IFDA--VRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAH 297
F +R P D+ + ++ +PS R T +E++ H
Sbjct: 255 EFXRRLKEGTRMRAP----DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 300
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 101/198 (51%), Gaps = 9/198 (4%)
Query: 47 QLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDL 106
+LG G GV+ + S K +G V+A K I + + + I E++++ + + P +V
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN--QIIRELQVLHECNS-PYIVGF 69
Query: 107 KAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCH-GNGVVHR 165
+ + + + ME GG L L+K GR E + +++ ++Y + ++HR
Sbjct: 70 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 129
Query: 166 DLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAGG-YNQAAD 224
D+KP NIL+ ++ IKL DFG++ + + VG+ Y++PE L G Y+ +D
Sbjct: 130 DVKPSNILVNSRGE---IKLCDFGVSGQL-IDSMANSFVGTRSYMSPERLQGTHYSVQSD 185
Query: 225 VWSAGVILYILLSGMPPF 242
+WS G+ L + G P
Sbjct: 186 IWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 101/198 (51%), Gaps = 9/198 (4%)
Query: 47 QLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDL 106
+LG G GV+ + S K +G V+A K I + + + I E++++ + + P +V
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN--QIIRELQVLHECNS-PYIVGF 69
Query: 107 KAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCH-GNGVVHR 165
+ + + + ME GG L L+K GR E + +++ ++Y + ++HR
Sbjct: 70 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 129
Query: 166 DLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAGG-YNQAAD 224
D+KP NIL+ ++ IKL DFG++ + + VG+ Y++PE L G Y+ +D
Sbjct: 130 DVKPSNILVNSRGE---IKLCDFGVSGQL-IDSMANSFVGTRSYMSPERLQGTHYSVQSD 185
Query: 225 VWSAGVILYILLSGMPPF 242
+WS G+ L + G P
Sbjct: 186 IWSMGLSLVEMAVGRYPI 203
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 103/200 (51%), Gaps = 12/200 (6%)
Query: 47 QLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDL 106
+LG G GV+ + S K +G V+A K I + + + I E++++ + + P +V
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN--QIIRELQVLHECNS-PYIVGF 69
Query: 107 KAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCH-GNGVVHR 165
+ + + + ME GG L L+K GR E + +++ ++Y + ++HR
Sbjct: 70 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 129
Query: 166 DLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAGG-YNQAAD 224
D+KP NIL+ ++ IKL DFG++ + + VG+ Y++PE L G Y+ +D
Sbjct: 130 DVKPSNILVNSRGE---IKLCDFGVSGQL-IDSMANSFVGTRSYMSPERLQGTHYSVQSD 185
Query: 225 VWSAGVILYILLSG---MPP 241
+WS G+ L + G +PP
Sbjct: 186 IWSMGLSLVEMAVGRYPIPP 205
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 96/206 (46%), Gaps = 22/206 (10%)
Query: 46 KQLGWGQFGVIREC----SDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ LG G FG + C TGE +A KS+ + + +K EIEI+ L H
Sbjct: 27 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLY-HE 83
Query: 102 NVVDLKAVYEEE--DYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQV---VSY 156
N+V K + E+ + + L+ME G L L K ++ + ++ +Q+ + Y
Sbjct: 84 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPK--NKNKINLKQQLKYAVQICKGMDY 141
Query: 157 CHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYI---KAGQNLHGTVGSP-FYIAP 212
VHRDL N+L+ S +K+ DFGL I K + SP F+ AP
Sbjct: 142 LGSRQYVHRDLAARNVLV---ESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAP 198
Query: 213 EVL-AGGYNQAADVWSAGVILYILLS 237
E L + A+DVWS GV L+ LL+
Sbjct: 199 ECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 96/206 (46%), Gaps = 22/206 (10%)
Query: 46 KQLGWGQFGVIREC----SDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ LG G FG + C TGE +A KS+ + + +K EIEI+ L H
Sbjct: 15 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLY-HE 71
Query: 102 NVVDLKAVYEEE--DYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQV---VSY 156
N+V K + E+ + + L+ME G L L K ++ + ++ +Q+ + Y
Sbjct: 72 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPK--NKNKINLKQQLKYAVQICKGMDY 129
Query: 157 CHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYI---KAGQNLHGTVGSP-FYIAP 212
VHRDL N+L+ S +K+ DFGL I K + SP F+ AP
Sbjct: 130 LGSRQYVHRDLAARNVLV---ESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAP 186
Query: 213 EVL-AGGYNQAADVWSAGVILYILLS 237
E L + A+DVWS GV L+ LL+
Sbjct: 187 ECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 104/232 (44%), Gaps = 34/232 (14%)
Query: 44 LGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDV---RSIKLEIEIMTKLSGH 100
GK LG G FG + + + +A L D ++ E+++MT+L H
Sbjct: 49 FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSH 108
Query: 101 PNVVDLKAVYEEEDYVHLLMELCAGGELFHRLE-KYGRFSETEAR--------------- 144
N+V+L ++L+ E C G+L + L K +FSE E
Sbjct: 109 ENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNV 168
Query: 145 VIFRHLM----QV---VSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAG 197
+ F L+ QV + + VHRDL N+L+ + +K+ DFGLA I +
Sbjct: 169 LTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLV---THGKVVKICDFGLARDIMSD 225
Query: 198 QN--LHGTVGSPF-YIAPEVLAGG-YNQAADVWSAGVILYILLS-GMPPFWG 244
N + G P ++APE L G Y +DVWS G++L+ + S G+ P+ G
Sbjct: 226 SNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPG 277
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 110/236 (46%), Gaps = 20/236 (8%)
Query: 48 LGWGQFGVIRECSDKFTGE---VLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVV 104
+G G+FG + K G+ +A K++ T + R E IM + HPNV+
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSG--YTEKQRRDFLSEASIMGQFD-HPNVI 71
Query: 105 DLKAVYEEEDYVHLLMELCAGGELFHRLEKY-GRFSETEARVIFRHLMQVVSYCHGNGVV 163
L+ V + V ++ E G L L + G+F+ + + R + + Y V
Sbjct: 72 HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYV 131
Query: 164 HRDLKPENILLATKSSSSPIKLADFGLATYIK---AGQNLHGTVGSPF---YIAPEVLA- 216
HR L NIL+ +S+ K++DFGL+ +++ + +G + APE +
Sbjct: 132 HRALAARNILV---NSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQY 188
Query: 217 GGYNQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISA 271
+ A+DVWS G++++ ++S G P+W T + +A+ D R P P D SA
Sbjct: 189 RKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIE-QDYRLPP-PMDCPSA 242
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 109/223 (48%), Gaps = 27/223 (12%)
Query: 44 LGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNV 103
L K+LG GQFG + + +V A K++ + V++ E +M L H +
Sbjct: 16 LVKKLGAGQFGEVWMGYYNNSTKV-AVKTLKPGTM----SVQAFLEEANLMKTLQ-HDKL 69
Query: 104 VDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQV-------VSY 156
V L AV +E+ ++++ E A G L L+ S+ +V+ L+ ++Y
Sbjct: 70 VRLYAVVTKEEPIYIITEFMAKGSLLDFLK-----SDEGGKVLLPKLIDFSAQIAEGMAY 124
Query: 157 CHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF---YIAPE 213
+HRDL+ N+L+ S S K+ADFGLA I+ + G+ F + APE
Sbjct: 125 IERKNYIHRDLRAANVLV---SESLMCKIADFGLARVIEDNE-YTAREGAKFPIKWTAPE 180
Query: 214 VLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGKTKSKIFDAV 254
+ G + ++VWS G++LY I+ G P+ G+T + + A+
Sbjct: 181 AINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSAL 223
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 119/275 (43%), Gaps = 32/275 (11%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVD 105
+++G G+FG + +C + G + A K K +V++ +++ E+ L H +VV
Sbjct: 17 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALR-EVYAHAVLGQHSHVVR 75
Query: 106 LKAVYEEEDYVHLLMELCAGGELFHRLEKYGR----FSETEARVIFRHLMQVVSYCHGNG 161
+ + E+D++ + E C GG L + + R F E E + + + + + Y H
Sbjct: 76 YFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS 135
Query: 162 VVHRDLKPENILLATKSSSSP----------------IKLADFGLATYIKAGQNLHGTVG 205
+VH D+KP NI ++ S + K+ D G T I + Q G
Sbjct: 136 LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQV---EEG 192
Query: 206 SPFYIAPEVLAGGYNQ--AADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPS 263
++A EVL Y AD+++ + + + +G P + +R R P
Sbjct: 193 DSRFLANEVLQENYTHLPKADIFALALTV-VCAAGAEPL--PRNGDQWHEIRQG--RLPR 247
Query: 264 DPWDHISASARDLIMGMLRVDPSTRLTAAEVLAHS 298
P +S +L+ M+ DP R +A ++ HS
Sbjct: 248 IP-QVLSQEFTELLKVMIHPDPERRPSAMALVKHS 281
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 122/276 (44%), Gaps = 36/276 (13%)
Query: 11 QLSTQFCNSYKVSSLTGTILDATQISN------LSDRYVLGKQLGWGQFGVIRECSDKFT 64
Q+ + SY+ +S T +D TQ+ + GK LG G FG + E +
Sbjct: 13 QVRWKIIESYEGNSYT--FIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGL 70
Query: 65 GEVLACKSIAKDRLVTV---EDVRSIKLEIEIMTKLSGHPNVVDLKAVYEEEDYVHLLME 121
G+ A +A L + ++ ++ E++IM+ L H N+V+L V ++ E
Sbjct: 71 GKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 130
Query: 122 LCAGGELFHRLEK---------YGRFSETEARVIFRHLM-------QVVSYCHGNGVVHR 165
C G+L + L + Y E ++ R L+ Q +++ +HR
Sbjct: 131 YCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNCIHR 190
Query: 166 DLKPENILLATKSSSSPIKLADFGLATYIKAGQN--LHGTVGSPF-YIAPE-VLAGGYNQ 221
D+ N+LL + K+ DFGLA I N + G P ++APE + Y
Sbjct: 191 DVAARNVLLTNGHVA---KIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTV 247
Query: 222 AADVWSAGVILYILLS-GMPPFWG-KTKSKIFDAVR 255
+DVWS G++L+ + S G+ P+ G SK + V+
Sbjct: 248 QSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK 283
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 119/275 (43%), Gaps = 32/275 (11%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVD 105
+++G G+FG + +C + G + A K K +V++ +++ E+ L H +VV
Sbjct: 13 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALR-EVYAHAVLGQHSHVVR 71
Query: 106 LKAVYEEEDYVHLLMELCAGGELFHRLEKYGR----FSETEARVIFRHLMQVVSYCHGNG 161
+ + E+D++ + E C GG L + + R F E E + + + + + Y H
Sbjct: 72 YFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS 131
Query: 162 VVHRDLKPENILLATKSSSSP----------------IKLADFGLATYIKAGQNLHGTVG 205
+VH D+KP NI ++ S + K+ D G T I + Q G
Sbjct: 132 LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQ---VEEG 188
Query: 206 SPFYIAPEVLAGGYNQ--AADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPS 263
++A EVL Y AD+++ + + + +G P + +R R P
Sbjct: 189 DSRFLANEVLQENYTHLPKADIFALALTV-VXAAGAEPL--PRNGDQWHEIRQG--RLPR 243
Query: 264 DPWDHISASARDLIMGMLRVDPSTRLTAAEVLAHS 298
P +S +L+ M+ DP R +A ++ HS
Sbjct: 244 IP-QVLSQEFTELLKVMIHPDPERRPSAMALVKHS 277
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 119/275 (43%), Gaps = 32/275 (11%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVD 105
+++G G+FG + +C + G + A K K +V++ +++ E+ L H +VV
Sbjct: 15 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALR-EVYAHAVLGQHSHVVR 73
Query: 106 LKAVYEEEDYVHLLMELCAGGELFHRLEKYGR----FSETEARVIFRHLMQVVSYCHGNG 161
+ + E+D++ + E C GG L + + R F E E + + + + + Y H
Sbjct: 74 YFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS 133
Query: 162 VVHRDLKPENILLATKSSSSP----------------IKLADFGLATYIKAGQNLHGTVG 205
+VH D+KP NI ++ S + K+ D G T I + Q G
Sbjct: 134 LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQV---EEG 190
Query: 206 SPFYIAPEVLAGGYNQ--AADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPS 263
++A EVL Y AD+++ + + + +G P + +R R P
Sbjct: 191 DSRFLANEVLQENYTHLPKADIFALALTV-VCAAGAEPL--PRNGDQWHEIRQG--RLPR 245
Query: 264 DPWDHISASARDLIMGMLRVDPSTRLTAAEVLAHS 298
P +S +L+ M+ DP R +A ++ HS
Sbjct: 246 IP-QVLSQEFTELLKVMIHPDPERRPSAMALVKHS 279
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 137/331 (41%), Gaps = 78/331 (23%)
Query: 41 RYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH 100
RY+L ++LGWG F + D +A K + D++ T + + EI+++ +++
Sbjct: 20 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYT----EAAEDEIKLLQRVNDA 75
Query: 101 PNVVD--------LKAV----YEEEDYVHLLMELCAGGE-LFHRLEKYGR--FSETEARV 145
N + LK + ++ + VH++M GE L ++KY +
Sbjct: 76 DNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQ 135
Query: 146 IFRHLMQVVSYCHGN-GVVHRDLKPENILLATKSSSS---PIKLADFGLATYIKAGQNLH 201
I + L+ + Y H G++H D+KPEN+L+ S IK+AD G A + ++
Sbjct: 136 ISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYD--EHYT 193
Query: 202 GTVGSPFYIAPEVLAGG-YNQAADVWSAGVILYILLSG---------------------- 238
++ + Y +PEVL G + AD+WS +++ L++G
Sbjct: 194 NSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQI 253
Query: 239 ------MPPFW---GKTKSKIFDA-----------------VRAADLRFPSDPWDHISAS 272
+P + GK F++ V +F D IS
Sbjct: 254 IELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEIS-- 311
Query: 273 ARDLIMGMLRVDPSTRLTAAEVLAHSWMEEC 303
D + ML++DP R A ++ H W+++
Sbjct: 312 --DFLSPMLQLDPRKRADAGGLVNHPWLKDT 340
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 137/331 (41%), Gaps = 78/331 (23%)
Query: 41 RYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH 100
RY+L ++LGWG F + D +A K + D++ T + + EI+++ +++
Sbjct: 20 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYT----EAAEDEIKLLQRVNDA 75
Query: 101 PNVVD--------LKAV----YEEEDYVHLLMELCAGGE-LFHRLEKYGR--FSETEARV 145
N + LK + ++ + VH++M GE L ++KY +
Sbjct: 76 DNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQ 135
Query: 146 IFRHLMQVVSYCHGN-GVVHRDLKPENILLATKSSSS---PIKLADFGLATYIKAGQNLH 201
I + L+ + Y H G++H D+KPEN+L+ S IK+AD G A + ++
Sbjct: 136 ISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYD--EHYT 193
Query: 202 GTVGSPFYIAPEVLAGG-YNQAADVWSAGVILYILLSG---------------------- 238
++ + Y +PEVL G + AD+WS +++ L++G
Sbjct: 194 NSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQI 253
Query: 239 ------MPPFW---GKTKSKIFDA-----------------VRAADLRFPSDPWDHISAS 272
+P + GK F++ V +F D IS
Sbjct: 254 IELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEIS-- 311
Query: 273 ARDLIMGMLRVDPSTRLTAAEVLAHSWMEEC 303
D + ML++DP R A ++ H W+++
Sbjct: 312 --DFLSPMLQLDPRKRADAGGLVNHPWLKDT 340
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 119/275 (43%), Gaps = 32/275 (11%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVD 105
+++G G+FG + +C + G + A K K +V++ +++ E+ L H +VV
Sbjct: 15 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALR-EVYAHAVLGQHSHVVR 73
Query: 106 LKAVYEEEDYVHLLMELCAGGELFHRLEKYGR----FSETEARVIFRHLMQVVSYCHGNG 161
+ + E+D++ + E C GG L + + R F E E + + + + + Y H
Sbjct: 74 YFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS 133
Query: 162 VVHRDLKPENILLATKSSSSP----------------IKLADFGLATYIKAGQNLHGTVG 205
+VH D+KP NI ++ S + K+ D G T I + Q G
Sbjct: 134 LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQV---EEG 190
Query: 206 SPFYIAPEVLAGGYNQ--AADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPS 263
++A EVL Y AD+++ + + + +G P + +R R P
Sbjct: 191 DSRFLANEVLQENYTHLPKADIFALALTV-VCAAGAEPL--PRNGDQWHEIRQG--RLPR 245
Query: 264 DPWDHISASARDLIMGMLRVDPSTRLTAAEVLAHS 298
P +S +L+ M+ DP R +A ++ HS
Sbjct: 246 IP-QVLSQEFTELLKVMIHPDPERRPSAMALVKHS 279
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 143/352 (40%), Gaps = 89/352 (25%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKL 97
+ D Y++ +G G +G + DK T + +A K + + + D + I EI I+ +L
Sbjct: 24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNR-MFEDLIDCKRILREITILNRL 82
Query: 98 SGHPNVVDLKAVYEEE----DYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQV 153
+ + ++ D +++++E+ A +L + +E + I +L+
Sbjct: 83 KSDYIIRLYDLIIPDDLLKFDELYIVLEI-ADSDLKKLFKTPIFLTEEHIKTILYNLLLG 141
Query: 154 VSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN-------------- 199
++ H +G++HRDLKP N LL S +K+ DFGLA I + ++
Sbjct: 142 ENFIHESGIIHRDLKPANCLLNQDCS---VKVCDFGLARTINSEKDTNIVNDLEENEEPG 198
Query: 200 ---------LHGTVGSPFYIAPE--VLAGGYNQAADVWSAGVILYILLSGM--------- 239
L V + +Y APE +L Y ++ D+WS G I LL+ +
Sbjct: 199 PHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTN 258
Query: 240 --PPFWGKT--------KSK-------------IFDAVRAA---DLRFPSDP-------- 265
P F G + SK IF+ + DL+ + P
Sbjct: 259 RFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKL 318
Query: 266 ------------WDHISASARDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQ 305
+ IS +L+ ML+ +P+ R+T + L H ++++ +
Sbjct: 319 FPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRK 370
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 122/271 (45%), Gaps = 34/271 (12%)
Query: 48 LGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLK 107
+G G FG + + K G + + +D R E+E++ KL HPN+++L
Sbjct: 30 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 89
Query: 108 AVYEEEDYVHLLMELCAGGELFHRLEK---------YGRFSETEARVIFRHLMQVVS--- 155
E Y++L +E G L L K + + T + + + L+ +
Sbjct: 90 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 149
Query: 156 ----YCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLH--GTVGS-PF 208
Y +HR+L NIL+ + K+ADFGL+ GQ ++ T+G P
Sbjct: 150 RGMDYLSQKQFIHRNLAARNILVGENYVA---KIADFGLSR----GQEVYVKKTMGRLPV 202
Query: 209 -YIAPEVLAGG-YNQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAV-RAADLRFPSD 264
++A E L Y +DVWS GV+L+ ++S G P+ G T +++++ + + L P +
Sbjct: 203 RWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLN 262
Query: 265 PWDHISASARDLIMGMLRVDPSTRLTAAEVL 295
D + DL+ R P R + A++L
Sbjct: 263 CDDEVY----DLMRQCWREKPYERPSFAQIL 289
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 112/246 (45%), Gaps = 37/246 (15%)
Query: 40 DRYVLGKQLGWGQFGVI---------RECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLE 90
DR VLGK LG G FG + ++ ++ T +A K + D T +D+ + E
Sbjct: 21 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTK--VAVKMLKSD--ATEKDLSDLISE 76
Query: 91 IEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLE---------KYGRFSET 141
+E+M + H N+++L ++ +++++E + G L L+ Y
Sbjct: 77 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 136
Query: 142 EARVIFRHLM----QV---VSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYI 194
E ++ + L+ QV + Y +HRDL N+L+ + + +K+ADFGLA I
Sbjct: 137 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDI 193
Query: 195 KAGQNLHGTVGSPF---YIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGKTKSK 249
T ++APE L Y +DVWS GV+L+ I G P+ G +
Sbjct: 194 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 253
Query: 250 IFDAVR 255
+F ++
Sbjct: 254 LFKLLK 259
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 108/243 (44%), Gaps = 31/243 (12%)
Query: 40 DRYVLGKQLGWGQFG--VIREC----SDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEI 93
D+ LGK LG G FG V+ E DK V + KD T +D+ + E+E+
Sbjct: 22 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEM 80
Query: 94 MTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLE---------KYGRFSETEAR 144
M + H N+++L ++ +++++E + G L L Y E +
Sbjct: 81 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 140
Query: 145 VIFRHLMQV-------VSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAG 197
+ F+ L+ + Y +HRDL N+L+ + ++ +K+ADFGLA I
Sbjct: 141 MTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLV---TENNVMKIADFGLARDINNI 197
Query: 198 QNLHGTVGSPF---YIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGKTKSKIFD 252
T ++APE L Y +DVWS GV+++ I G P+ G ++F
Sbjct: 198 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 257
Query: 253 AVR 255
++
Sbjct: 258 LLK 260
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 112/246 (45%), Gaps = 37/246 (15%)
Query: 40 DRYVLGKQLGWGQFGVI---------RECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLE 90
DR VLGK LG G FG + ++ ++ T +A K + D T +D+ + E
Sbjct: 13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTK--VAVKMLKSD--ATEKDLSDLISE 68
Query: 91 IEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEK---------YGRFSET 141
+E+M + H N+++L ++ +++++E + G L L+ Y
Sbjct: 69 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNP 128
Query: 142 EARVIFRHLM----QV---VSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYI 194
E ++ + L+ QV + Y +HRDL N+L+ + + +K+ADFGLA I
Sbjct: 129 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDI 185
Query: 195 KAGQNLHGTVGSPF---YIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGKTKSK 249
T ++APE L Y +DVWS GV+L+ I G P+ G +
Sbjct: 186 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 245
Query: 250 IFDAVR 255
+F ++
Sbjct: 246 LFKLLK 251
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 112/246 (45%), Gaps = 37/246 (15%)
Query: 40 DRYVLGKQLGWGQFGVI---------RECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLE 90
DR VLGK LG G FG + ++ ++ T +A K + D T +D+ + E
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTK--VAVKMLKSD--ATEKDLSDLISE 83
Query: 91 IEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLE---------KYGRFSET 141
+E+M + H N+++L ++ +++++E + G L L+ Y
Sbjct: 84 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNP 143
Query: 142 EARVIFRHLM----QV---VSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYI 194
E ++ + L+ QV + Y +HRDL N+L+ + + +K+ADFGLA I
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDI 200
Query: 195 KAGQNLHGTVGSPF---YIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGKTKSK 249
T ++APE L Y +DVWS GV+L+ I G P+ G +
Sbjct: 201 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 260
Query: 250 IFDAVR 255
+F ++
Sbjct: 261 LFKLLK 266
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 112/246 (45%), Gaps = 37/246 (15%)
Query: 40 DRYVLGKQLGWGQFGVI---------RECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLE 90
DR VLGK LG G FG + ++ ++ T +A K + D T +D+ + E
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTK--VAVKMLKSD--ATEKDLSDLISE 83
Query: 91 IEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLE---------KYGRFSET 141
+E+M + H N+++L ++ +++++E + G L L+ Y
Sbjct: 84 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 143
Query: 142 EARVIFRHLM----QV---VSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYI 194
E ++ + L+ QV + Y +HRDL N+L+ + + +K+ADFGLA I
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDI 200
Query: 195 KAGQNLHGTVGSPF---YIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGKTKSK 249
T ++APE L Y +DVWS GV+L+ I G P+ G +
Sbjct: 201 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 260
Query: 250 IFDAVR 255
+F ++
Sbjct: 261 LFKLLK 266
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 108/243 (44%), Gaps = 31/243 (12%)
Query: 40 DRYVLGKQLGWGQFG--VIREC----SDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEI 93
D+ LGK LG G FG V+ E DK V + KD T +D+ + E+E+
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEM 139
Query: 94 MTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLE---------KYGRFSETEAR 144
M + H N+++L ++ +++++E + G L L Y E +
Sbjct: 140 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 199
Query: 145 VIFRHLMQV-------VSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAG 197
+ F+ L+ + Y +HRDL N+L+ + ++ +K+ADFGLA I
Sbjct: 200 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINNI 256
Query: 198 QNLHGTVGSPF---YIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGKTKSKIFD 252
T ++APE L Y +DVWS GV+++ I G P+ G ++F
Sbjct: 257 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 316
Query: 253 AVR 255
++
Sbjct: 317 LLK 319
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 119/234 (50%), Gaps = 23/234 (9%)
Query: 27 GTILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRS 86
G+++D ++++ + +++G GQFG++ + +A K+I ++ ++ ED
Sbjct: 1 GSVIDPSELTFV-------QEIGSGQFGLVH-LGYWLNKDKVAIKTI-REGAMSEEDFIE 51
Query: 87 IKLEIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLE-KYGRFSETEARV 145
E E+M KLS HP +V L V E+ + L+ E G L L + G F+
Sbjct: 52 ---EAEVMMKLS-HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLG 107
Query: 146 IFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVG 205
+ + + ++Y V+HRDL N L+ + IK++DFG+ ++ Q T G
Sbjct: 108 MCLDVCEGMAYLEEASVIHRDLAARNCLVG---ENQVIKVSDFGMTRFVLDDQYTSST-G 163
Query: 206 SPF---YIAPEVLA-GGYNQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAV 254
+ F + +PEV + Y+ +DVWS GV+++ + S G P+ ++ S++ + +
Sbjct: 164 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 217
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 112/246 (45%), Gaps = 37/246 (15%)
Query: 40 DRYVLGKQLGWGQFGVI---------RECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLE 90
DR VLGK LG G FG + ++ ++ T +A K + D T +D+ + E
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTK--VAVKMLKSD--ATEKDLSDLISE 83
Query: 91 IEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEK---------YGRFSET 141
+E+M + H N+++L ++ +++++E + G L L+ Y
Sbjct: 84 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNP 143
Query: 142 EARVIFRHLM----QV---VSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYI 194
E ++ + L+ QV + Y +HRDL N+L+ + + +K+ADFGLA I
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDI 200
Query: 195 KAGQNLHGTVGSPF---YIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGKTKSK 249
T ++APE L Y +DVWS GV+L+ I G P+ G +
Sbjct: 201 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 260
Query: 250 IFDAVR 255
+F ++
Sbjct: 261 LFKLLK 266
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 128/283 (45%), Gaps = 23/283 (8%)
Query: 36 SNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMT 95
+ ++D LG ++G G G + + + TG V+A K + R E+ + I ++++++
Sbjct: 22 AEINDLENLG-EMGSGTCGQVWKMRFRKTGHVIAVKQMR--RSGNKEENKRILMDLDVVL 78
Query: 96 KLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVS 155
K P +V + V + MEL G +L+K + E R++ + + +V
Sbjct: 79 KSHDCPYIVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPE-RILGKMTVAIVK 135
Query: 156 YCH----GNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIA 211
+ +GV+HRD+KP NILL + IKL DFG++ + + + G Y+A
Sbjct: 136 ALYYLKEKHGVIHRDVKPSNILLDERGQ---IKLCDFGISGRLVDDKAKDRSAGCAAYMA 192
Query: 212 PEVL------AGGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDP 265
PE + Y+ ADVWS G+ L L +G P+ K F+ + P
Sbjct: 193 PERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPY--KNCKTDFEVLTKVLQEEPPLL 250
Query: 266 WDHISASA--RDLIMGMLRVDPSTRLTAAEVLAHSWMEECEQV 306
H+ S + + L D R ++L HS+++ E +
Sbjct: 251 PGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRYETL 293
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 112/246 (45%), Gaps = 37/246 (15%)
Query: 40 DRYVLGKQLGWGQFGVI---------RECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLE 90
DR VLGK LG G FG + ++ ++ T +A K + D T +D+ + E
Sbjct: 17 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTK--VAVKMLKSD--ATEKDLSDLISE 72
Query: 91 IEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLE---------KYGRFSET 141
+E+M + H N+++L ++ +++++E + G L L+ Y
Sbjct: 73 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 132
Query: 142 EARVIFRHLM----QV---VSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYI 194
E ++ + L+ QV + Y +HRDL N+L+ + + +K+ADFGLA I
Sbjct: 133 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDI 189
Query: 195 KAGQNLHGTVGSPF---YIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGKTKSK 249
T ++APE L Y +DVWS GV+L+ I G P+ G +
Sbjct: 190 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 249
Query: 250 IFDAVR 255
+F ++
Sbjct: 250 LFKLLK 255
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 97/203 (47%), Gaps = 18/203 (8%)
Query: 46 KQLGWGQFGVIR-ECSDKF---TGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ LG G FG + C D TGE++A K++ D + K EI+I+ L H
Sbjct: 20 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD--CGPQHRSGWKQEIDILRTLY-HE 76
Query: 102 NVVDLKAVYEE--EDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
+++ K E+ E + L+ME G L L ++ + + + + + ++Y H
Sbjct: 77 HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS-IGLAQLLLFAQQICEGMAYLHA 135
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTV---GSP-FYIAPEVL 215
+HR+L N+LL + +K+ DFGLA + G + SP F+ APE L
Sbjct: 136 QHYIHRNLAARNVLL---DNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL 192
Query: 216 AG-GYNQAADVWSAGVILYILLS 237
+ A+DVWS GV LY LL+
Sbjct: 193 KEYKFYYASDVWSFGVTLYELLT 215
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 108/243 (44%), Gaps = 31/243 (12%)
Query: 40 DRYVLGKQLGWGQFG--VIREC----SDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEI 93
D+ LGK LG G FG V+ E DK V + KD T +D+ + E+E+
Sbjct: 24 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEM 82
Query: 94 MTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLE---------KYGRFSETEAR 144
M + H N+++L ++ +++++E + G L L Y E +
Sbjct: 83 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 142
Query: 145 VIFRHLMQV-------VSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAG 197
+ F+ L+ + Y +HRDL N+L+ + ++ +K+ADFGLA I
Sbjct: 143 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINNI 199
Query: 198 QNLHGTVGSPF---YIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGKTKSKIFD 252
T ++APE L Y +DVWS GV+++ I G P+ G ++F
Sbjct: 200 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 259
Query: 253 AVR 255
++
Sbjct: 260 LLK 262
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 108/243 (44%), Gaps = 31/243 (12%)
Query: 40 DRYVLGKQLGWGQFG--VIREC----SDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEI 93
D+ LGK LG G FG V+ E DK V + KD T +D+ + E+E+
Sbjct: 27 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEM 85
Query: 94 MTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLE---------KYGRFSETEAR 144
M + H N+++L ++ +++++E + G L L Y E +
Sbjct: 86 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 145
Query: 145 VIFRHLMQV-------VSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAG 197
+ F+ L+ + Y +HRDL N+L+ + ++ +K+ADFGLA I
Sbjct: 146 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINNI 202
Query: 198 QNLHGTVGSPF---YIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGKTKSKIFD 252
T ++APE L Y +DVWS GV+++ I G P+ G ++F
Sbjct: 203 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 262
Query: 253 AVR 255
++
Sbjct: 263 LLK 265
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 112/246 (45%), Gaps = 37/246 (15%)
Query: 40 DRYVLGKQLGWGQFGVI---------RECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLE 90
DR VLGK LG G FG + ++ ++ T +A K + D T +D+ + E
Sbjct: 20 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTK--VAVKMLKSD--ATEKDLSDLISE 75
Query: 91 IEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLE---------KYGRFSET 141
+E+M + H N+++L ++ +++++E + G L L+ Y
Sbjct: 76 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 135
Query: 142 EARVIFRHLM----QV---VSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYI 194
E ++ + L+ QV + Y +HRDL N+L+ + + +K+ADFGLA I
Sbjct: 136 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDI 192
Query: 195 KAGQNLHGTVGSPF---YIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGKTKSK 249
T ++APE L Y +DVWS GV+L+ I G P+ G +
Sbjct: 193 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 252
Query: 250 IFDAVR 255
+F ++
Sbjct: 253 LFKLLK 258
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 108/243 (44%), Gaps = 31/243 (12%)
Query: 40 DRYVLGKQLGWGQFG--VIREC----SDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEI 93
D+ LGK LG G FG V+ E DK V + KD T +D+ + E+E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEM 93
Query: 94 MTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLE---------KYGRFSETEAR 144
M + H N+++L ++ +++++E + G L L Y E +
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 145 VIFRHLMQV-------VSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAG 197
+ F+ L+ + Y +HRDL N+L+ + ++ +++ADFGLA I
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMRIADFGLARDINNI 210
Query: 198 QNLHGTVGSPF---YIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGKTKSKIFD 252
T ++APE L Y +DVWS GV+++ I G P+ G ++F
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 270
Query: 253 AVR 255
++
Sbjct: 271 LLK 273
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 97/203 (47%), Gaps = 18/203 (8%)
Query: 46 KQLGWGQFGVIR-ECSDKF---TGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ LG G FG + C D TGE++A K++ D + K EI+I+ L H
Sbjct: 20 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD--CGPQHRSGWKQEIDILRTLY-HE 76
Query: 102 NVVDLKAVYEE--EDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
+++ K E+ E + L+ME G L L ++ + + + + + ++Y H
Sbjct: 77 HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS-IGLAQLLLFAQQICEGMAYLHS 135
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTV---GSP-FYIAPEVL 215
+HR+L N+LL + +K+ DFGLA + G + SP F+ APE L
Sbjct: 136 QHYIHRNLAARNVLL---DNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL 192
Query: 216 AG-GYNQAADVWSAGVILYILLS 237
+ A+DVWS GV LY LL+
Sbjct: 193 KEYKFYYASDVWSFGVTLYELLT 215
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 31/243 (12%)
Query: 40 DRYVLGKQLGWGQFG--VIREC----SDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEI 93
D+ LGK LG G FG V+ E DK V + KD T +D+ + E+E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEM 93
Query: 94 MTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLE---------KYGRFSETEAR 144
M + H N++ L ++ +++++E + G L L Y E +
Sbjct: 94 MKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 145 VIFRHLMQV-------VSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAG 197
+ F+ L+ + Y +HRDL N+L+ + ++ +K+ADFGLA I
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINNI 210
Query: 198 QNLHGTVGSPF---YIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGKTKSKIFD 252
T ++APE L Y +DVWS GV+++ I G P+ G ++F
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 270
Query: 253 AVR 255
++
Sbjct: 271 LLK 273
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 114/249 (45%), Gaps = 43/249 (17%)
Query: 40 DRYVLGKQLGWGQFGVI---------RECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLE 90
DR VLGK LG G FG + ++ ++ T +A K + D T +D+ + E
Sbjct: 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTK--VAVKMLKSD--ATEKDLSDLISE 124
Query: 91 IEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLE---------KYGRFSET 141
+E+M + H N+++L ++ +++++E + G L L+ Y
Sbjct: 125 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 184
Query: 142 EARVIFRHLM----QV---VSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLAT-- 192
E ++ + L+ QV + Y +HRDL N+L+ + + +K+ADFGLA
Sbjct: 185 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDI 241
Query: 193 ----YIKAGQNLHGTVGSPFYIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGKT 246
Y K N V ++APE L Y +DVWS GV+L+ I G P+ G
Sbjct: 242 HHIDYYKKTTNGRLPVK---WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 298
Query: 247 KSKIFDAVR 255
++F ++
Sbjct: 299 VEELFKLLK 307
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 31/243 (12%)
Query: 40 DRYVLGKQLGWGQFG--VIREC----SDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEI 93
D+ LGK LG G FG V+ E DK V + KD T +D+ + E+E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEM 93
Query: 94 MTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLE---------KYGRFSETEAR 144
M + H N++ L ++ +++++E + G L L Y E +
Sbjct: 94 MKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 145 VIFRHLMQV-------VSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAG 197
+ F+ L+ + Y +HRDL N+L+ + ++ +K+ADFGLA I
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINNI 210
Query: 198 QNLHGTVGSPF---YIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGKTKSKIFD 252
T ++APE L Y +DVWS GV+++ I G P+ G ++F
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 270
Query: 253 AVR 255
++
Sbjct: 271 LLK 273
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 110/223 (49%), Gaps = 19/223 (8%)
Query: 46 KQLGWGQFGVIRECSDKFTGEV-LACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVV 104
K+LG GQFGV++ K+ G+ +A K I + + E + E ++M LS H +V
Sbjct: 14 KELGTGQFGVVK--YGKWRGQYDVAIKMIKEGSMSEDEFIE----EAKVMMNLS-HEKLV 66
Query: 105 DLKAVYEEEDYVHLLMELCAGGELFHRL-EKYGRFSETEARVIFRHLMQVVSYCHGNGVV 163
L V ++ + ++ E A G L + L E RF + + + + + + Y +
Sbjct: 67 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFL 126
Query: 164 HRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF---YIAPEVLA-GGY 219
HRDL N L+ + +K++DFGL+ Y+ +VGS F + PEVL +
Sbjct: 127 HRDLAARNCLV---NDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWSPPEVLMYSKF 182
Query: 220 NQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAVRAADLRF 261
+ +D+W+ GV+++ + S G P+ T S+ + + A LR
Sbjct: 183 SSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI-AQGLRL 224
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 119/234 (50%), Gaps = 23/234 (9%)
Query: 27 GTILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRS 86
G+++D ++++ + +++G GQFG++ + +A K+I ++ ++ ED
Sbjct: 1 GSVIDPSELTFV-------QEIGSGQFGLVH-LGYWLNKDKVAIKTI-REGAMSEEDFIE 51
Query: 87 IKLEIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLE-KYGRFSETEARV 145
E E+M KLS HP +V L V E+ + L+ E G L L + G F+
Sbjct: 52 ---EAEVMMKLS-HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLG 107
Query: 146 IFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVG 205
+ + + ++Y V+HRDL N L+ + IK++DFG+ ++ Q T G
Sbjct: 108 MCLDVCEGMAYLEEACVIHRDLAARNCLVG---ENQVIKVSDFGMTRFVLDDQYTSST-G 163
Query: 206 SPF---YIAPEVLA-GGYNQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAV 254
+ F + +PEV + Y+ +DVWS GV+++ + S G P+ ++ S++ + +
Sbjct: 164 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 217
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 111/223 (49%), Gaps = 19/223 (8%)
Query: 46 KQLGWGQFGVIRECSDKFTGEV-LACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVV 104
K+LG GQFGV++ K+ G+ +A K I + + E + E ++M LS H +V
Sbjct: 30 KELGTGQFGVVK--YGKWRGQYDVAIKMIKEGSMSEDEFIE----EAKVMMNLS-HEKLV 82
Query: 105 DLKAVYEEEDYVHLLMELCAGGELFHRL-EKYGRFSETEARVIFRHLMQVVSYCHGNGVV 163
L V ++ + ++ E A G L + L E RF + + + + + + Y +
Sbjct: 83 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFL 142
Query: 164 HRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF---YIAPEVLA-GGY 219
HRDL N L+ + +K++DFGL+ Y+ + +VGS F + PEVL +
Sbjct: 143 HRDLAARNCLV---NDQGVVKVSDFGLSRYVLDDEET-SSVGSKFPVRWSPPEVLMYSKF 198
Query: 220 NQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAVRAADLRF 261
+ +D+W+ GV+++ + S G P+ T S+ + + A LR
Sbjct: 199 SSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI-AQGLRL 240
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 121/271 (44%), Gaps = 23/271 (8%)
Query: 27 GTILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRS 86
G DA +I S R L +LG G FG + + T V A K++ + +
Sbjct: 7 GLAKDAWEIPRESLR--LEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEA 59
Query: 87 IKLEIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLE-KYGRFSETEARV 145
E ++M KL H +V L AV EE ++++ME + G L L+ + G++ V
Sbjct: 60 FLQEAQVMKKLR-HEKLVQLYAVVSEEP-IYIVMEYMSKGCLLDFLKGEMGKYLRLPQLV 117
Query: 146 -IFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTV 204
+ + ++Y VHRDL+ NIL+ K+ADFGLA I+ +
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVC---KVADFGLARLIEDNE-YTARQ 173
Query: 205 GSPF---YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAVRAADL 259
G+ F + APE L G + +DVWS G++L L + G P+ G ++ D V
Sbjct: 174 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-Y 232
Query: 260 RFPSDPWDHISASARDLIMGMLRVDPSTRLT 290
R P P S DL+ R DP R T
Sbjct: 233 RMPCPP--ECPESLHDLMCQCWRKDPEERPT 261
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 112/246 (45%), Gaps = 37/246 (15%)
Query: 40 DRYVLGKQLGWGQFGVI---------RECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLE 90
DR VLGK LG G FG + ++ ++ T +A K + D T +D+ + E
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTK--VAVKMLKSD--ATEKDLSDLISE 83
Query: 91 IEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLE---------KYGRFSET 141
+E+M + H N+++L ++ +++++E + G L L+ +
Sbjct: 84 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNP 143
Query: 142 EARVIFRHLM----QV---VSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYI 194
E ++ + L+ QV + Y +HRDL N+L+ + + +K+ADFGLA I
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDI 200
Query: 195 KAGQNLHGTVGSPF---YIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGKTKSK 249
T ++APE L Y +DVWS GV+L+ I G P+ G +
Sbjct: 201 HHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 260
Query: 250 IFDAVR 255
+F ++
Sbjct: 261 LFKLLK 266
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 110/223 (49%), Gaps = 19/223 (8%)
Query: 46 KQLGWGQFGVIRECSDKFTGEV-LACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVV 104
K+LG GQFGV++ K+ G+ +A K I + + E + E ++M LS H +V
Sbjct: 10 KELGTGQFGVVK--YGKWRGQYDVAIKMIKEGSMSEDEFIE----EAKVMMNLS-HEKLV 62
Query: 105 DLKAVYEEEDYVHLLMELCAGGELFHRL-EKYGRFSETEARVIFRHLMQVVSYCHGNGVV 163
L V ++ + ++ E A G L + L E RF + + + + + + Y +
Sbjct: 63 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFL 122
Query: 164 HRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF---YIAPEVLA-GGY 219
HRDL N L+ + +K++DFGL+ Y+ +VGS F + PEVL +
Sbjct: 123 HRDLAARNCLV---NDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWSPPEVLMYSKF 178
Query: 220 NQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAVRAADLRF 261
+ +D+W+ GV+++ + S G P+ T S+ + + A LR
Sbjct: 179 SSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI-AQGLRL 220
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 110/223 (49%), Gaps = 19/223 (8%)
Query: 46 KQLGWGQFGVIRECSDKFTGEV-LACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVV 104
K+LG GQFGV++ K+ G+ +A K I + + E + E ++M LS H +V
Sbjct: 21 KELGTGQFGVVK--YGKWRGQYDVAIKMIKEGSMSEDEFIE----EAKVMMNLS-HEKLV 73
Query: 105 DLKAVYEEEDYVHLLMELCAGGELFHRL-EKYGRFSETEARVIFRHLMQVVSYCHGNGVV 163
L V ++ + ++ E A G L + L E RF + + + + + + Y +
Sbjct: 74 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFL 133
Query: 164 HRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF---YIAPEVLA-GGY 219
HRDL N L+ + +K++DFGL+ Y+ +VGS F + PEVL +
Sbjct: 134 HRDLAARNCLV---NDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWSPPEVLMYSKF 189
Query: 220 NQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAVRAADLRF 261
+ +D+W+ GV+++ + S G P+ T S+ + + A LR
Sbjct: 190 SSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI-AQGLRL 231
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 110/223 (49%), Gaps = 19/223 (8%)
Query: 46 KQLGWGQFGVIRECSDKFTGEV-LACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVV 104
K+LG GQFGV++ K+ G+ +A K I + + E + E ++M LS H +V
Sbjct: 30 KELGTGQFGVVK--YGKWRGQYDVAIKMIKEGSMSEDEFIE----EAKVMMNLS-HEKLV 82
Query: 105 DLKAVYEEEDYVHLLMELCAGGELFHRL-EKYGRFSETEARVIFRHLMQVVSYCHGNGVV 163
L V ++ + ++ E A G L + L E RF + + + + + + Y +
Sbjct: 83 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFL 142
Query: 164 HRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF---YIAPEVLA-GGY 219
HRDL N L+ + +K++DFGL+ Y+ +VGS F + PEVL +
Sbjct: 143 HRDLAARNCLV---NDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWSPPEVLMYSKF 198
Query: 220 NQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAVRAADLRF 261
+ +D+W+ GV+++ + S G P+ T S+ + + A LR
Sbjct: 199 SSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI-AQGLRL 240
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 110/223 (49%), Gaps = 19/223 (8%)
Query: 46 KQLGWGQFGVIRECSDKFTGEV-LACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVV 104
K+LG GQFGV++ K+ G+ +A K I + + E + E ++M LS H +V
Sbjct: 15 KELGTGQFGVVK--YGKWRGQYDVAIKMIKEGSMSEDEFIE----EAKVMMNLS-HEKLV 67
Query: 105 DLKAVYEEEDYVHLLMELCAGGELFHRL-EKYGRFSETEARVIFRHLMQVVSYCHGNGVV 163
L V ++ + ++ E A G L + L E RF + + + + + + Y +
Sbjct: 68 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFL 127
Query: 164 HRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF---YIAPEVLA-GGY 219
HRDL N L+ + +K++DFGL+ Y+ +VGS F + PEVL +
Sbjct: 128 HRDLAARNCLV---NDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWSPPEVLMYSKF 183
Query: 220 NQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAVRAADLRF 261
+ +D+W+ GV+++ + S G P+ T S+ + + A LR
Sbjct: 184 SSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI-AQGLRL 225
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 105/232 (45%), Gaps = 21/232 (9%)
Query: 44 LGKQLGWGQFGVIRECS-DKFTGEVL--ACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH 100
L ++LG G FGV+R D +G+ + A K + D L E + E+ M L H
Sbjct: 16 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD-H 74
Query: 101 PNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKY-GRFSETEARVIFRHLMQV---VSY 156
N++ L V + ++ EL G L RL K+ G F + R+ +QV + Y
Sbjct: 75 RNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFL---LGTLSRYAVQVAEGMGY 130
Query: 157 CHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN---LHGTVGSPF-YIAP 212
+HRDL N+LLAT+ +K+ DFGL + + + PF + AP
Sbjct: 131 LESKRFIHRDLAARNLLLATRDL---VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 187
Query: 213 EVL-AGGYNQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAVRAADLRFP 262
E L ++ A+D W GV L+ + + G P+ G S+I + R P
Sbjct: 188 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 239
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 121/271 (44%), Gaps = 23/271 (8%)
Query: 27 GTILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRS 86
G DA +I S R L +LG G FG + + T V A K++ + +
Sbjct: 7 GLAKDAWEIPRESLR--LEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEA 59
Query: 87 IKLEIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLE-KYGRFSETEARV 145
E ++M KL H +V L AV EE +++++E + G L L+ + G++ V
Sbjct: 60 FLQEAQVMKKLR-HEKLVQLYAVVSEEP-IYIVIEYMSKGSLLDFLKGEMGKYLRLPQLV 117
Query: 146 -IFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTV 204
+ + ++Y VHRDL+ NIL+ K+ADFGLA I+ +
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVC---KVADFGLARLIEDNEXT-ARQ 173
Query: 205 GSPF---YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAVRAADL 259
G+ F + APE L G + +DVWS G++L L + G P+ G ++ D V
Sbjct: 174 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-Y 232
Query: 260 RFPSDPWDHISASARDLIMGMLRVDPSTRLT 290
R P P S DL+ R DP R T
Sbjct: 233 RMPCPP--ECPESLHDLMCQCWRKDPEERPT 261
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 99/205 (48%), Gaps = 13/205 (6%)
Query: 43 VLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRS-IKLEIEIMTKLSGHP 101
V G + G G FGV+ + T +A K +A +T E+++ EI++ K H
Sbjct: 25 VGGNKXGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQ-HE 81
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRL---EKYGRFSETEARVIFRHLMQVVSYCH 158
N+V+L + D + L+ G L RL + S I + +++ H
Sbjct: 82 NLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLH 141
Query: 159 GNGVVHRDLKPENILLATKSSSSPIKLADFGLA-TYIKAGQNLHGT--VGSPFYIAPEVL 215
N +HRD+K NILL ++ K++DFGLA K Q + + VG+ Y APE L
Sbjct: 142 ENHHIHRDIKSANILLDEAFTA---KISDFGLARASEKFAQXVXXSRIVGTTAYXAPEAL 198
Query: 216 AGGYNQAADVWSAGVILYILLSGMP 240
G +D++S GV+L +++G+P
Sbjct: 199 RGEITPKSDIYSFGVVLLEIITGLP 223
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 115/254 (45%), Gaps = 25/254 (9%)
Query: 44 LGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNV 103
L + +G G+FG + + G +A K I D ++ E +MT+L H N+
Sbjct: 197 LLQTIGKGEFGDV--MLGDYRGNKVAVKCIKND-----ATAQAFLAEASVMTQLR-HSNL 248
Query: 104 VDLKAV-YEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQV---VSYCHG 159
V L V EE+ ++++ E A G L L GR S + + + V + Y G
Sbjct: 249 VQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEG 307
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF-YIAPEVL-AG 217
N VHRDL N+L+ S + K++DFGL K + T P + APE L
Sbjct: 308 NNFVHRDLAARNVLV---SEDNVAKVSDFGLT---KEASSTQDTGKLPVKWTAPEALREK 361
Query: 218 GYNQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDL 276
++ +DVWS G++L+ + S G P+ + + D V + + D D + D+
Sbjct: 362 KFSTKSDVWSFGILLWEIYSFGRVPY---PRIPLKDVVPRVEKGYKMDAPDGCPPAVYDV 418
Query: 277 IMGMLRVDPSTRLT 290
+ +D +TR T
Sbjct: 419 MKNCWHLDAATRPT 432
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 96/203 (47%), Gaps = 18/203 (8%)
Query: 46 KQLGWGQFGVIR-ECSDKF---TGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+ LG G FG + C D TGE++A K++ D + K EI+I+ L H
Sbjct: 37 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD--AGPQHRSGWKQEIDILRTLY-HE 93
Query: 102 NVVDLKAVYEEEDY--VHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHG 159
+++ K E+ + L+ME G L L ++ + + + + + ++Y H
Sbjct: 94 HIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS-IGLAQLLLFAQQICEGMAYLHA 152
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTV---GSP-FYIAPEVL 215
+HRDL N+LL + +K+ DFGLA + G + SP F+ APE L
Sbjct: 153 QHYIHRDLAARNVLL---DNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECL 209
Query: 216 AG-GYNQAADVWSAGVILYILLS 237
+ A+DVWS GV LY LL+
Sbjct: 210 KEYKFYYASDVWSFGVTLYELLT 232
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 121/271 (44%), Gaps = 23/271 (8%)
Query: 27 GTILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRS 86
G DA +I S R L +LG G FG + + T V A K++ + +
Sbjct: 7 GLAKDAWEIPRESLR--LEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEA 59
Query: 87 IKLEIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLE-KYGRFSETEARV 145
E ++M KL H +V L AV EE +++++E + G L L+ + G++ V
Sbjct: 60 FLQEAQVMKKLR-HEKLVQLYAVVSEEP-IYIVIEYMSKGSLLDFLKGEMGKYLRLPQLV 117
Query: 146 -IFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTV 204
+ + ++Y VHRDL+ NIL+ K+ADFGLA I+ +
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVC---KVADFGLARLIEDNE-YTARQ 173
Query: 205 GSPF---YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAVRAADL 259
G+ F + APE L G + +DVWS G++L L + G P+ G ++ D V
Sbjct: 174 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-Y 232
Query: 260 RFPSDPWDHISASARDLIMGMLRVDPSTRLT 290
R P P S DL+ R DP R T
Sbjct: 233 RMPCPP--ECPESLHDLMCQCWRKDPEERPT 261
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 105/232 (45%), Gaps = 21/232 (9%)
Query: 44 LGKQLGWGQFGVIRECS-DKFTGEVL--ACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH 100
L ++LG G FGV+R D +G+ + A K + D L E + E+ M L H
Sbjct: 16 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD-H 74
Query: 101 PNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKY-GRFSETEARVIFRHLMQV---VSY 156
N++ L V + ++ EL G L RL K+ G F + R+ +QV + Y
Sbjct: 75 RNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFL---LGTLSRYAVQVAEGMGY 130
Query: 157 CHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN---LHGTVGSPF-YIAP 212
+HRDL N+LLAT+ +K+ DFGL + + + PF + AP
Sbjct: 131 LESKRFIHRDLAARNLLLATRDL---VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 187
Query: 213 EVL-AGGYNQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAVRAADLRFP 262
E L ++ A+D W GV L+ + + G P+ G S+I + R P
Sbjct: 188 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 239
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 105/232 (45%), Gaps = 21/232 (9%)
Query: 44 LGKQLGWGQFGVIRECS-DKFTGEVL--ACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH 100
L ++LG G FGV+R D +G+ + A K + D L E + E+ M L H
Sbjct: 22 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD-H 80
Query: 101 PNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKY-GRFSETEARVIFRHLMQV---VSY 156
N++ L V + ++ EL G L RL K+ G F + R+ +QV + Y
Sbjct: 81 RNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFL---LGTLSRYAVQVAEGMGY 136
Query: 157 CHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN---LHGTVGSPF-YIAP 212
+HRDL N+LLAT+ +K+ DFGL + + + PF + AP
Sbjct: 137 LESKRFIHRDLAARNLLLATRDL---VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 193
Query: 213 EVL-AGGYNQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAVRAADLRFP 262
E L ++ A+D W GV L+ + + G P+ G S+I + R P
Sbjct: 194 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 245
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 105/232 (45%), Gaps = 21/232 (9%)
Query: 44 LGKQLGWGQFGVIRECS-DKFTGEVL--ACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH 100
L ++LG G FGV+R D +G+ + A K + D L E + E+ M L H
Sbjct: 22 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD-H 80
Query: 101 PNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKY-GRFSETEARVIFRHLMQV---VSY 156
N++ L V + ++ EL G L RL K+ G F + R+ +QV + Y
Sbjct: 81 RNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFL---LGTLSRYAVQVAEGMGY 136
Query: 157 CHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN---LHGTVGSPF-YIAP 212
+HRDL N+LLAT+ +K+ DFGL + + + PF + AP
Sbjct: 137 LESKRFIHRDLAARNLLLATRDL---VKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAP 193
Query: 213 EVL-AGGYNQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAVRAADLRFP 262
E L ++ A+D W GV L+ + + G P+ G S+I + R P
Sbjct: 194 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 245
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 105/232 (45%), Gaps = 21/232 (9%)
Query: 44 LGKQLGWGQFGVIRECS-DKFTGEVL--ACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH 100
L ++LG G FGV+R D +G+ + A K + D L E + E+ M L H
Sbjct: 12 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD-H 70
Query: 101 PNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKY-GRFSETEARVIFRHLMQV---VSY 156
N++ L V + ++ EL G L RL K+ G F + R+ +QV + Y
Sbjct: 71 RNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFL---LGTLSRYAVQVAEGMGY 126
Query: 157 CHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN---LHGTVGSPF-YIAP 212
+HRDL N+LLAT+ +K+ DFGL + + + PF + AP
Sbjct: 127 LESKRFIHRDLAARNLLLATRDL---VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 183
Query: 213 EVL-AGGYNQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAVRAADLRFP 262
E L ++ A+D W GV L+ + + G P+ G S+I + R P
Sbjct: 184 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 235
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 105/232 (45%), Gaps = 21/232 (9%)
Query: 44 LGKQLGWGQFGVIRECS-DKFTGEVL--ACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH 100
L ++LG G FGV+R D +G+ + A K + D L E + E+ M L H
Sbjct: 12 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD-H 70
Query: 101 PNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKY-GRFSETEARVIFRHLMQV---VSY 156
N++ L V + ++ EL G L RL K+ G F + R+ +QV + Y
Sbjct: 71 RNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFL---LGTLSRYAVQVAEGMGY 126
Query: 157 CHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN---LHGTVGSPF-YIAP 212
+HRDL N+LLAT+ +K+ DFGL + + + PF + AP
Sbjct: 127 LESKRFIHRDLAARNLLLATRDL---VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 183
Query: 213 EVL-AGGYNQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAVRAADLRFP 262
E L ++ A+D W GV L+ + + G P+ G S+I + R P
Sbjct: 184 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 235
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 107/243 (44%), Gaps = 31/243 (12%)
Query: 40 DRYVLGKQLGWGQFG--VIREC----SDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEI 93
D+ LGK LG G FG V+ E DK V + KD T +D+ + E+E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEM 93
Query: 94 MTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLE---------KYGRFSETEAR 144
M + H N+++L ++ +++++ + G L L Y E +
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 145 VIFRHLMQV-------VSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAG 197
+ F+ L+ + Y +HRDL N+L+ + ++ +K+ADFGLA I
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINNI 210
Query: 198 QNLHGTVGSPF---YIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGKTKSKIFD 252
T ++APE L Y +DVWS GV+++ I G P+ G ++F
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 270
Query: 253 AVR 255
++
Sbjct: 271 LLK 273
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 105/232 (45%), Gaps = 21/232 (9%)
Query: 44 LGKQLGWGQFGVIRECS-DKFTGEVL--ACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH 100
L ++LG G FGV+R D +G+ + A K + D L E + E+ M L H
Sbjct: 12 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD-H 70
Query: 101 PNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKY-GRFSETEARVIFRHLMQV---VSY 156
N++ L V + ++ EL G L RL K+ G F + R+ +QV + Y
Sbjct: 71 RNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFL---LGTLSRYAVQVAEGMGY 126
Query: 157 CHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQN---LHGTVGSPF-YIAP 212
+HRDL N+LLAT+ +K+ DFGL + + + PF + AP
Sbjct: 127 LESKRFIHRDLAARNLLLATRDL---VKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAP 183
Query: 213 EVL-AGGYNQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAVRAADLRFP 262
E L ++ A+D W GV L+ + + G P+ G S+I + R P
Sbjct: 184 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 235
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 104/210 (49%), Gaps = 12/210 (5%)
Query: 47 QLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDL 106
+LG G GV+ + + +G ++A K I + + + I E++++ + + P +V
Sbjct: 23 ELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRN--QIIRELQVLHECNS-PYIVGF 79
Query: 107 KAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCH-GNGVVHR 165
+ + + + ME GG L L++ R E + +++ ++Y + ++HR
Sbjct: 80 YGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHR 139
Query: 166 DLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAGG-YNQAAD 224
D+KP NIL+ ++ IKL DFG++ + + VG+ Y+APE L G Y+ +D
Sbjct: 140 DVKPSNILVNSRGE---IKLCDFGVSGQL-IDSMANSFVGTRSYMAPERLQGTHYSVQSD 195
Query: 225 VWSAGVILYILLSG---MPPFWGKTKSKIF 251
+WS G+ L L G +PP K IF
Sbjct: 196 IWSMGLSLVELAVGRYPIPPPDAKELEAIF 225
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 120/271 (44%), Gaps = 23/271 (8%)
Query: 27 GTILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRS 86
G DA +I S R L +LG G FG + + T V A K++ + +
Sbjct: 7 GLAKDAWEIPRESLR--LEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEA 59
Query: 87 IKLEIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLE-KYGRFSETEARV 145
E ++M KL H +V L AV EE ++++ E + G L L+ + G++ V
Sbjct: 60 FLQEAQVMKKLR-HEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV 117
Query: 146 -IFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTV 204
+ + ++Y VHRDL+ NIL+ K+ADFGLA I+ +
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVC---KVADFGLARLIEDNE-YTARQ 173
Query: 205 GSPF---YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAVRAADL 259
G+ F + APE L G + +DVWS G++L L + G P+ G ++ D V
Sbjct: 174 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-Y 232
Query: 260 RFPSDPWDHISASARDLIMGMLRVDPSTRLT 290
R P P S DL+ R DP R T
Sbjct: 233 RMPCPP--ECPESLHDLMCQCWRKDPEERPT 261
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 85/199 (42%), Gaps = 24/199 (12%)
Query: 100 HPNVVDLKAVYEEED-----YVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVV 154
HP++V + E D +++ME G L + K + EA ++ +
Sbjct: 138 HPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSL--KRSKGQKLPVAEAIAYLLEILPAL 195
Query: 155 SYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPFYIAPEV 214
SY H G+V+ DLKPENI+L + +KL D G + I + L+GT P + APE+
Sbjct: 196 SYLHSIGLVYNDLKPENIMLTEEQ----LKLIDLGAVSRINSFGYLYGT---PGFQAPEI 248
Query: 215 LAGGYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASAR 274
+ G A D+++ G L L +P G R D DP S
Sbjct: 249 VRTGPTVATDIYTVGRTLAALTLDLPTRNG----------RYVDGLPEDDPVLKTYDSYG 298
Query: 275 DLIMGMLRVDPSTRLTAAE 293
L+ + DP R T AE
Sbjct: 299 RLLRRAIDPDPRQRFTTAE 317
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 120/271 (44%), Gaps = 23/271 (8%)
Query: 27 GTILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRS 86
G DA +I S R L +LG G FG + + T V A K++ + +
Sbjct: 7 GLAKDAWEIPRESLR--LEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEA 59
Query: 87 IKLEIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLE-KYGRFSETEARV 145
E ++M KL H +V L AV EE ++++ E + G L L+ + G++ V
Sbjct: 60 FLQEAQVMKKLR-HEKLVQLYAVVSEEP-IYIVCEYMSKGSLLDFLKGEMGKYLRLPQLV 117
Query: 146 -IFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTV 204
+ + ++Y VHRDL+ NIL+ K+ADFGLA I+ +
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVC---KVADFGLARLIEDNE-YTARQ 173
Query: 205 GSPF---YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAVRAADL 259
G+ F + APE L G + +DVWS G++L L + G P+ G ++ D V
Sbjct: 174 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-Y 232
Query: 260 RFPSDPWDHISASARDLIMGMLRVDPSTRLT 290
R P P S DL+ R DP R T
Sbjct: 233 RMPCPP--ECPESLHDLMCQCWRKDPEERPT 261
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 125/284 (44%), Gaps = 24/284 (8%)
Query: 14 TQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSI 73
T C + K + G DA +I S R L +LG G FG + + T V A K++
Sbjct: 162 TNVCPTSKPQT-QGLAKDAWEIPRESLR--LEVKLGQGCFGEVWMGTWNGTTRV-AIKTL 217
Query: 74 AKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLE 133
+ + E ++M KL H +V L AV EE ++++ E + G L L+
Sbjct: 218 KPGNM----SPEAFLQEAQVMKKLR-HEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLK 271
Query: 134 -KYGRFSETEARV-IFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLA 191
+ G++ V + + ++Y VHRDL+ NIL+ + K+ADFGL
Sbjct: 272 GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLG 328
Query: 192 TYIKAGQNLHGTVGSPF---YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWGKT 246
I+ + G+ F + APE L G + +DVWS G++L L + G P+ G
Sbjct: 329 RLIEDNE-YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV 387
Query: 247 KSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLT 290
++ D V R P P S DL+ R DP R T
Sbjct: 388 NREVLDQVERG-YRMPCPP--ECPESLHDLMCQCWRKDPEERPT 428
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 119/282 (42%), Gaps = 31/282 (10%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRL---VTVEDVRSIKLEIEIMTK 96
+R GK LG G FG + E + + A ++A L + + ++ E+++++
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 97 LSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLE-KYGRF--SETEARVIFR----- 148
L H N+V+L ++ E C G+L + L K F S+T ++
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 165
Query: 149 ----------HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQ 198
+ + +++ +HRDL NILL + K+ DFGLA +IK
Sbjct: 166 DLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILL---THGRITKICDFGLARHIKNDS 222
Query: 199 N--LHGTVGSPF-YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDA 253
N + G P ++APE + Y +DVWS G+ L+ L S G P+ G F
Sbjct: 223 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYK 282
Query: 254 VRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVL 295
+ R S +H A D++ DP R T +++
Sbjct: 283 MIKEGFRMLSP--EHAPAEMYDIMKTCWDADPLKRPTFKQIV 322
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 110/214 (51%), Gaps = 18/214 (8%)
Query: 44 LGKQLGWGQFGVIRECSDKFTGEV-LACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPN 102
L K+LG GQFGV++ K+ G+ +A K I + + E + E + M KLS HP
Sbjct: 12 LLKELGSGQFGVVK--LGKWKGQYDVAVKMIKEGSMSEDEFFQ----EAQTMMKLS-HPK 64
Query: 103 VVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGR-FSETEARVIFRHLMQVVSYCHGNG 161
+V V +E ++++ E + G L + L +G+ ++ + + + +++ +
Sbjct: 65 LVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQ 124
Query: 162 VVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF---YIAPEVL-AG 217
+HRDL N L+ +K++DFG+ Y+ Q + +VG+ F + APEV
Sbjct: 125 FIHRDLAARNCLV---DRDLCVKVSDFGMTRYVLDDQYV-SSVGTKFPVKWSAPEVFHYF 180
Query: 218 GYNQAADVWSAGVILYILLS-GMPPFWGKTKSKI 250
Y+ +DVW+ G++++ + S G P+ T S++
Sbjct: 181 KYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEV 214
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 107/219 (48%), Gaps = 24/219 (10%)
Query: 46 KQLGWGQFGVIREC----SDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHP 101
+++G GQFG++ DK + + S+++D + E E+M KLS HP
Sbjct: 33 QEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIE---------EAEVMMKLS-HP 82
Query: 102 NVVDLKAVYEEEDYVHLLMELCAGGELFHRLE-KYGRFSETEARVIFRHLMQVVSYCHGN 160
+V L V E+ + L+ E G L L + G F+ + + + ++Y
Sbjct: 83 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 142
Query: 161 GVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF---YIAPEVLA- 216
V+HRDL N L+ + IK++DFG+ ++ Q T G+ F + +PEV +
Sbjct: 143 CVIHRDLAARNCLVG---ENQVIKVSDFGMTRFVLDDQYTSST-GTKFPVKWASPEVFSF 198
Query: 217 GGYNQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAV 254
Y+ +DVWS GV+++ + S G P+ ++ S++ + +
Sbjct: 199 SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 237
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 96/208 (46%), Gaps = 16/208 (7%)
Query: 90 EIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLE-KYGRFSETEARV-IF 147
E ++M KL H +V L AV EE ++++ E + G L L+ + G++ V +
Sbjct: 52 EAQVMKKLR-HEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMA 109
Query: 148 RHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSP 207
+ ++Y VHRDL+ NIL+ K+ADFGLA I+ + G+
Sbjct: 110 AQIASGMAYVERMNYVHRDLRAANILVGENLVC---KVADFGLARLIEDNE-YTARQGAK 165
Query: 208 F---YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAVRAADLRFP 262
F + APE L G + +DVWS G++L L + G P+ G ++ D V R P
Sbjct: 166 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMP 224
Query: 263 SDPWDHISASARDLIMGMLRVDPSTRLT 290
P S DL+ R DP R T
Sbjct: 225 CPP--ECPESLHDLMCQCWRKDPEERPT 250
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 107/243 (44%), Gaps = 31/243 (12%)
Query: 40 DRYVLGKQLGWGQFG--VIREC----SDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEI 93
D+ LGK LG G FG V+ E DK V + KD T +D+ + E+E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEM 93
Query: 94 MTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLE---------KYGRFSETEAR 144
M + H N+++L ++ +++++ + G L L Y E +
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 145 VIFRHLMQV-------VSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAG 197
+ F+ L+ + Y +HRDL N+L+ + ++ +K+ADFGLA I
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINNI 210
Query: 198 QNLHGTVGSPF---YIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGKTKSKIFD 252
T ++APE L Y +DVWS GV+++ I G P+ G ++F
Sbjct: 211 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 270
Query: 253 AVR 255
++
Sbjct: 271 LLK 273
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 96/208 (46%), Gaps = 16/208 (7%)
Query: 90 EIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLE-KYGRFSETEARV-IF 147
E ++M KL H +V L AV EE ++++ E + G L L+ + G++ V +
Sbjct: 54 EAQVMKKLR-HEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMA 111
Query: 148 RHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSP 207
+ ++Y VHRDL+ NIL+ K+ADFGLA I+ + G+
Sbjct: 112 AQIASGMAYVERMNYVHRDLRAANILVGENLVC---KVADFGLARLIEDNE-YTARQGAK 167
Query: 208 F---YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAVRAADLRFP 262
F + APE L G + +DVWS G++L L + G P+ G ++ D V R P
Sbjct: 168 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMP 226
Query: 263 SDPWDHISASARDLIMGMLRVDPSTRLT 290
P S DL+ R DP R T
Sbjct: 227 CPP--ECPESLHDLMCQCWRKDPEERPT 252
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 109/215 (50%), Gaps = 16/215 (7%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVD 105
+++G GQFG++ + +A K+I ++ ++ ED E E+M KLS HP +V
Sbjct: 11 QEIGSGQFGLVH-LGYWLNKDKVAIKTI-REGAMSEEDFIE---EAEVMMKLS-HPKLVQ 64
Query: 106 LKAVYEEEDYVHLLMELCAGGELFHRLE-KYGRFSETEARVIFRHLMQVVSYCHGNGVVH 164
L V E+ + L+ E G L L + G F+ + + + ++Y V+H
Sbjct: 65 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIH 124
Query: 165 RDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF---YIAPEVLA-GGYN 220
RDL N L+ + IK++DFG+ ++ Q T G+ F + +PEV + Y+
Sbjct: 125 RDLAARNCLVG---ENQVIKVSDFGMTRFVLDDQYTSST-GTKFPVKWASPEVFSFSRYS 180
Query: 221 QAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAV 254
+DVWS GV+++ + S G P+ ++ S++ + +
Sbjct: 181 SKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 215
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 109/215 (50%), Gaps = 16/215 (7%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVD 105
+++G GQFG++ + +A K+I ++ ++ ED E E+M KLS HP +V
Sbjct: 16 QEIGSGQFGLVH-LGYWLNKDKVAIKTI-REGAMSEEDFIE---EAEVMMKLS-HPKLVQ 69
Query: 106 LKAVYEEEDYVHLLMELCAGGELFHRLE-KYGRFSETEARVIFRHLMQVVSYCHGNGVVH 164
L V E+ + L+ E G L L + G F+ + + + ++Y V+H
Sbjct: 70 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIH 129
Query: 165 RDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF---YIAPEVLA-GGYN 220
RDL N L+ + IK++DFG+ ++ Q T G+ F + +PEV + Y+
Sbjct: 130 RDLAARNCLVG---ENQVIKVSDFGMTRFVLDDQYTSST-GTKFPVKWASPEVFSFSRYS 185
Query: 221 QAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAV 254
+DVWS GV+++ + S G P+ ++ S++ + +
Sbjct: 186 SKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 220
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 98/204 (48%), Gaps = 20/204 (9%)
Query: 46 KQLGWGQFGVIR-ECSDKF---TGEVLACKSIAKDRLVTVEDVRS-IKLEIEIMTKLSGH 100
+ LG G FG + C D TGE++A K++ + +RS + EIEI+ L H
Sbjct: 15 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEG---CGPQLRSGWQREIEILRTLY-H 70
Query: 101 PNVVDLKAVYEE--EDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCH 158
++V K E+ E V L+ME G L L ++ + + + + + ++Y H
Sbjct: 71 EHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC-VGLAQLLLFAQQICEGMAYLH 129
Query: 159 GNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTV---GSP-FYIAPEV 214
+HR L N+LL + +K+ DFGLA + G + SP F+ APE
Sbjct: 130 AQHYIHRALAARNVLL---DNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC 186
Query: 215 LAG-GYNQAADVWSAGVILYILLS 237
L + A+DVWS GV LY LL+
Sbjct: 187 LKECKFYYASDVWSFGVTLYELLT 210
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 126/284 (44%), Gaps = 24/284 (8%)
Query: 14 TQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSI 73
T C + K + G DA +I S R L +LG G FG + + T V A K++
Sbjct: 161 TTVCPTSKPQT-QGLAKDAWEIPRESLR--LEVKLGQGCFGEVWMGTWNGTTRV-AIKTL 216
Query: 74 AKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLE 133
+ + E ++M KL H +V L AV EE ++++ E + G L L+
Sbjct: 217 KPGTM----SPEAFLQEAQVMKKLR-HEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLK 270
Query: 134 -KYGRFSETEARV-IFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLA 191
+ G++ V + + ++Y VHRDL+ NIL+ + K+ADFGLA
Sbjct: 271 GETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLA 327
Query: 192 TYIKAGQNLHGTVGSPF---YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWGKT 246
I+ + G+ F + APE L G + +DVWS G++L L + G P+ G
Sbjct: 328 RLIEDNE-YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV 386
Query: 247 KSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLT 290
++ D V R P P S DL+ R +P R T
Sbjct: 387 NREVLDQVERG-YRMPCPP--ECPESLHDLMCQCWRKEPEERPT 427
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 126/284 (44%), Gaps = 24/284 (8%)
Query: 14 TQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSI 73
T C + K + G DA +I S R L +LG G FG + + T V A K++
Sbjct: 161 TTVCPTSKPQT-QGLAKDAWEIPRESLR--LEVKLGQGCFGEVWMGTWNGTTRV-AIKTL 216
Query: 74 AKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLE 133
+ + E ++M KL H +V L AV EE ++++ E + G L L+
Sbjct: 217 KPGTM----SPEAFLQEAQVMKKLR-HEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLK 270
Query: 134 -KYGRFSETEARV-IFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLA 191
+ G++ V + + ++Y VHRDL+ NIL+ + K+ADFGLA
Sbjct: 271 GETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLA 327
Query: 192 TYIKAGQNLHGTVGSPF---YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWGKT 246
I+ + G+ F + APE L G + +DVWS G++L L + G P+ G
Sbjct: 328 RLIEDNE-YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV 386
Query: 247 KSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLT 290
++ D V R P P S DL+ R +P R T
Sbjct: 387 NREVLDQVERG-YRMPCPP--ECPESLHDLMCQCWRKEPEERPT 427
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 98/204 (48%), Gaps = 20/204 (9%)
Query: 46 KQLGWGQFGVIR-ECSDKF---TGEVLACKSIAKDRLVTVEDVRS-IKLEIEIMTKLSGH 100
+ LG G FG + C D TGE++A K++ + +RS + EIEI+ L H
Sbjct: 14 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEG---CGPQLRSGWQREIEILRTLY-H 69
Query: 101 PNVVDLKAVYEE--EDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCH 158
++V K E+ E V L+ME G L L ++ + + + + + ++Y H
Sbjct: 70 EHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC-VGLAQLLLFAQQICEGMAYLH 128
Query: 159 GNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTV---GSP-FYIAPEV 214
+HR L N+LL + +K+ DFGLA + G + SP F+ APE
Sbjct: 129 AQHYIHRALAARNVLL---DNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC 185
Query: 215 LAG-GYNQAADVWSAGVILYILLS 237
L + A+DVWS GV LY LL+
Sbjct: 186 LKECKFYYASDVWSFGVTLYELLT 209
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 120/271 (44%), Gaps = 23/271 (8%)
Query: 27 GTILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRS 86
G DA +I S R L +LG G FG + + T V A K++ + +
Sbjct: 7 GLAKDAWEIPRESLR--LEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEA 59
Query: 87 IKLEIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLE-KYGRFSETEARV 145
E ++M KL H +V L AV EE ++++ E + G L L+ + G++ V
Sbjct: 60 FLQEAQVMKKLR-HEKLVQLYAVVSEEP-IYIVTEYMSKGCLLDFLKGEMGKYLRLPQLV 117
Query: 146 -IFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTV 204
+ + ++Y VHRDL+ NIL+ K+ADFGLA I+ +
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVC---KVADFGLARLIEDNE-YTARQ 173
Query: 205 GSPF---YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAVRAADL 259
G+ F + APE L G + +DVWS G++L L + G P+ G ++ D V
Sbjct: 174 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-Y 232
Query: 260 RFPSDPWDHISASARDLIMGMLRVDPSTRLT 290
R P P S DL+ R DP R T
Sbjct: 233 RMPCPP--ECPESLHDLMCQCWRKDPEERPT 261
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 109/215 (50%), Gaps = 16/215 (7%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVD 105
+++G GQFG++ + +A K+I ++ ++ ED E E+M KLS HP +V
Sbjct: 14 QEIGSGQFGLVH-LGYWLNKDKVAIKTI-REGAMSEEDFIE---EAEVMMKLS-HPKLVQ 67
Query: 106 LKAVYEEEDYVHLLMELCAGGELFHRLE-KYGRFSETEARVIFRHLMQVVSYCHGNGVVH 164
L V E+ + L+ E G L L + G F+ + + + ++Y V+H
Sbjct: 68 LYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIH 127
Query: 165 RDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF---YIAPEVLA-GGYN 220
RDL N L+ + IK++DFG+ ++ Q T G+ F + +PEV + Y+
Sbjct: 128 RDLAARNCLVG---ENQVIKVSDFGMTRFVLDDQYTSST-GTKFPVKWASPEVFSFSRYS 183
Query: 221 QAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAV 254
+DVWS GV+++ + S G P+ ++ S++ + +
Sbjct: 184 SKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 218
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 120/271 (44%), Gaps = 23/271 (8%)
Query: 27 GTILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRS 86
G DA +I S R L +LG G FG + + T V A K++ + +
Sbjct: 7 GLAKDAWEIPRESLR--LEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEA 59
Query: 87 IKLEIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLE-KYGRFSETEARV 145
E ++M K+ H +V L AV EE ++++ E + G L L+ + G++ V
Sbjct: 60 FLQEAQVMKKIR-HEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV 117
Query: 146 -IFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTV 204
+ + ++Y VHRDL+ NIL+ K+ADFGLA I+ +
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLRAANILVGENLVC---KVADFGLARLIEDNE-YTARQ 173
Query: 205 GSPF---YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAVRAADL 259
G+ F + APE L G + +DVWS G++L L + G P+ G ++ D V
Sbjct: 174 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-Y 232
Query: 260 RFPSDPWDHISASARDLIMGMLRVDPSTRLT 290
R P P S DL+ R DP R T
Sbjct: 233 RMPCPP--ECPESLHDLMCQCWRKDPEERPT 261
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 119/271 (43%), Gaps = 23/271 (8%)
Query: 27 GTILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRS 86
G DA +I S R L +LG G FG + + T V A K++ + +
Sbjct: 7 GLAKDAWEIPRESLR--LEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEA 59
Query: 87 IKLEIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLE-KYGRFSETEARV 145
E ++M KL H +V L AV EE ++++ E + G L L+ + G++ V
Sbjct: 60 FLQEAQVMKKLR-HEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLV 117
Query: 146 -IFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTV 204
+ + ++Y VHRDL NIL+ K+ADFGLA I+ +
Sbjct: 118 DMAAQIASGMAYVERMNYVHRDLAAANILVGENLVC---KVADFGLARLIEDNE-YTARQ 173
Query: 205 GSPF---YIAPEV-LAGGYNQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAVRAADL 259
G+ F + APE L G + +DVWS G++L L + G P+ G ++ D V
Sbjct: 174 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-Y 232
Query: 260 RFPSDPWDHISASARDLIMGMLRVDPSTRLT 290
R P P S DL+ R DP R T
Sbjct: 233 RMPCPP--ECPESLHDLMCQCWRKDPEERPT 261
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 18/204 (8%)
Query: 46 KQLGWGQFGVIRECSDKFTGEV-LACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVV 104
K+LG GQFGV++ K+ G+ +A K I + + E + E ++M LS H +V
Sbjct: 15 KELGTGQFGVVK--YGKWRGQYDVAIKMIKEGSMSEDEFIE----EAKVMMNLS-HEKLV 67
Query: 105 DLKAVYEEEDYVHLLMELCAGGELFHRL-EKYGRFSETEARVIFRHLMQVVSYCHGNGVV 163
L V ++ + ++ E A G L + L E RF + + + + + + Y +
Sbjct: 68 QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFL 127
Query: 164 HRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF---YIAPEVLA-GGY 219
HRDL N L+ + +K++DFGL+ Y+ + GS F + PEVL +
Sbjct: 128 HRDLAARNCLV---NDQGVVKVSDFGLSRYV-LDDEYTSSRGSKFPVRWSPPEVLMYSKF 183
Query: 220 NQAADVWSAGVILYILLS-GMPPF 242
+ +D+W+ GV+++ + S G P+
Sbjct: 184 SSKSDIWAFGVLMWEIYSLGKMPY 207
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 118/282 (41%), Gaps = 31/282 (10%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRL---VTVEDVRSIKLEIEIMTK 96
+R GK LG G FG + E + + A ++A L + + ++ E+++++
Sbjct: 39 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 98
Query: 97 LSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLE-KYGRF--SETEARVIFR----- 148
L H N+V+L ++ E C G+L + L K F S+T ++
Sbjct: 99 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 158
Query: 149 ----------HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQ 198
+ + +++ +HRDL NILL + K+ DFGLA IK
Sbjct: 159 DLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILL---THGRITKICDFGLARDIKNDS 215
Query: 199 N--LHGTVGSPF-YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDA 253
N + G P ++APE + Y +DVWS G+ L+ L S G P+ G F
Sbjct: 216 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYK 275
Query: 254 VRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVL 295
+ R S +H A D++ DP R T +++
Sbjct: 276 MIKEGFRMLSP--EHAPAEMYDIMKTCWDADPLKRPTFKQIV 315
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 118/282 (41%), Gaps = 31/282 (10%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRL---VTVEDVRSIKLEIEIMTK 96
+R GK LG G FG + E + + A ++A L + + ++ E+++++
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 97 LSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLE-KYGRF--SETEARVIFR----- 148
L H N+V+L ++ E C G+L + L K F S+T ++
Sbjct: 83 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 142
Query: 149 ----------HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQ 198
+ + +++ +HRDL NILL + K+ DFGLA IK
Sbjct: 143 DLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILL---THGRITKICDFGLARDIKNDS 199
Query: 199 N--LHGTVGSPF-YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDA 253
N + G P ++APE + Y +DVWS G+ L+ L S G P+ G F
Sbjct: 200 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYK 259
Query: 254 VRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVL 295
+ R S +H A D++ DP R T +++
Sbjct: 260 MIKEGFRMLSP--EHAPAEMYDIMKTCWDADPLKRPTFKQIV 299
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 29/208 (13%)
Query: 47 QLGWGQFGVIRECS-DKF---TGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPN 102
QLG G FG + C D TG ++A K + + R + EI+I+ L
Sbjct: 17 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS---GPDQQRDFQREIQILKALHS--- 70
Query: 103 VVDLKAVYEEEDY------VHLLMELCAGGELFHRLEKY-GRFSETEARVIFRHLMQVVS 155
D Y Y + L+ME G L L+++ R + + + + +
Sbjct: 71 --DFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGME 128
Query: 156 YCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSP-----FYI 210
Y VHRDL NIL+ +++ +K+ADFGLA + ++ + V P F+
Sbjct: 129 YLGSRRCVHRDLAARNILVESEAH---VKIADFGLAKLLPLDKDYY-VVREPGQSPIFWY 184
Query: 211 APEVLAGG-YNQAADVWSAGVILYILLS 237
APE L+ +++ +DVWS GV+LY L +
Sbjct: 185 APESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 29/208 (13%)
Query: 47 QLGWGQFGVIRECS-DKF---TGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPN 102
QLG G FG + C D TG ++A K + + R + EI+I+ L
Sbjct: 18 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS---GPDQQRDFQREIQILKALHS--- 71
Query: 103 VVDLKAVYEEEDY------VHLLMELCAGGELFHRLEKY-GRFSETEARVIFRHLMQVVS 155
D Y Y + L+ME G L L+++ R + + + + +
Sbjct: 72 --DFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGME 129
Query: 156 YCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSP-----FYI 210
Y VHRDL NIL+ +++ +K+ADFGLA + ++ + V P F+
Sbjct: 130 YLGSRRCVHRDLAARNILVESEAH---VKIADFGLAKLLPLDKDYY-VVREPGQSPIFWY 185
Query: 211 APEVLAGG-YNQAADVWSAGVILYILLS 237
APE L+ +++ +DVWS GV+LY L +
Sbjct: 186 APESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 126/284 (44%), Gaps = 24/284 (8%)
Query: 14 TQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSI 73
T C + K + G DA +I S R L +LG G FG + + T V A K++
Sbjct: 244 TTVCPTSKPQT-QGLAKDAWEIPRESLR--LEVKLGQGCFGEVWMGTWNGTTRV-AIKTL 299
Query: 74 AKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLE 133
+ + E ++M KL H +V L AV EE ++++ E + G L L+
Sbjct: 300 KPGTM----SPEAFLQEAQVMKKLR-HEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLK 353
Query: 134 -KYGRFSETEARV-IFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLA 191
+ G++ V + + ++Y VHRDL+ NIL+ + K+ADFGLA
Sbjct: 354 GETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLA 410
Query: 192 TYIKAGQNLHGTVGSPF---YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWGKT 246
I+ + G+ F + APE L G + +DVWS G++L L + G P+ G
Sbjct: 411 RLIEDNE-YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV 469
Query: 247 KSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLT 290
++ D V R P P S DL+ R +P R T
Sbjct: 470 NREVLDQVERG-YRMPCPP--ECPESLHDLMCQCWRKEPEERPT 510
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 126/284 (44%), Gaps = 24/284 (8%)
Query: 14 TQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSI 73
T C + K + G DA +I S R L +LG G FG + + T V A K++
Sbjct: 161 TTVCPTSKPQT-QGLAKDAWEIPRESLR--LEVKLGQGCFGEVWMGTWNGTTRV-AIKTL 216
Query: 74 AKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLE 133
+ + E ++M KL H +V L AV EE ++++ E + G L L+
Sbjct: 217 KPGTM----SPEAFLQEAQVMKKLR-HEKLVQLYAVVSEEP-IYIVGEYMSKGSLLDFLK 270
Query: 134 -KYGRFSETEARV-IFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLA 191
+ G++ V + + ++Y VHRDL+ NIL+ + K+ADFGLA
Sbjct: 271 GETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLA 327
Query: 192 TYIKAGQNLHGTVGSPF---YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWGKT 246
I+ + G+ F + APE L G + +DVWS G++L L + G P+ G
Sbjct: 328 RLIEDNE-YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV 386
Query: 247 KSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLT 290
++ D V R P P S DL+ R +P R T
Sbjct: 387 NREVLDQVERG-YRMPCPP--ECPESLHDLMCQCWRKEPEERPT 427
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 88/186 (47%), Gaps = 12/186 (6%)
Query: 85 RSIKLEIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKY-GRFSETEA 143
R E IM + HPN++ L+ V ++ E G L L + G+F+ +
Sbjct: 95 RDFLSEASIMGQFD-HPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQL 153
Query: 144 RVIFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNL-HG 202
+ R + + Y G VHRDL N+L+ S+ K++DFGL+ ++ + +
Sbjct: 154 VGMLRGVGAGMRYLSDLGYVHRDLAARNVLV---DSNLVCKVSDFGLSRVLEDDPDAAYT 210
Query: 203 TVGSPFYI---APEVLA-GGYNQAADVWSAGVILY-ILLSGMPPFWGKTKSKIFDAVRAA 257
T G I APE +A ++ A+DVWS GV+++ +L G P+W T + +V
Sbjct: 211 TTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEG 270
Query: 258 DLRFPS 263
R P+
Sbjct: 271 -YRLPA 275
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 118/282 (41%), Gaps = 31/282 (10%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRL---VTVEDVRSIKLEIEIMTK 96
+R GK LG G FG + E + + A ++A L + + ++ E+++++
Sbjct: 41 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 100
Query: 97 LSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLE-KYGRF--SETEARVIFR----- 148
L H N+V+L ++ E C G+L + L K F S+T ++
Sbjct: 101 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 160
Query: 149 ----------HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQ 198
+ + +++ +HRDL NILL + K+ DFGLA IK
Sbjct: 161 DLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILL---THGRITKICDFGLARDIKNDS 217
Query: 199 N--LHGTVGSPF-YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDA 253
N + G P ++APE + Y +DVWS G+ L+ L S G P+ G F
Sbjct: 218 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYK 277
Query: 254 VRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVL 295
+ R S +H A D++ DP R T +++
Sbjct: 278 MIKEGFRMLSP--EHAPAEMYDIMKTCWDADPLKRPTFKQIV 317
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 96/208 (46%), Gaps = 16/208 (7%)
Query: 90 EIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLE-KYGRFSETEARV-IF 147
E ++M KL H +V L AV EE ++++ E + G L L+ + G++ V +
Sbjct: 56 EAQVMKKLR-HEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMA 113
Query: 148 RHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSP 207
+ ++Y VHRDL+ NIL+ K+ADFGLA I+ + G+
Sbjct: 114 AQIASGMAYVERMNYVHRDLRAANILVGENLVC---KVADFGLARLIEDNE-YTARQGAK 169
Query: 208 F---YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAVRAADLRFP 262
F + APE L G + +DVWS G++L L + G P+ G ++ D V R P
Sbjct: 170 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMP 228
Query: 263 SDPWDHISASARDLIMGMLRVDPSTRLT 290
P S DL+ R +P R T
Sbjct: 229 CPP--ECPESLHDLMCQCWRKEPEERPT 254
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 29/208 (13%)
Query: 47 QLGWGQFGVIRECS-DKF---TGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPN 102
QLG G FG + C D TG ++A K + + R + EI+I+ L
Sbjct: 30 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS---GPDQQRDFQREIQILKALHS--- 83
Query: 103 VVDLKAVYEEEDY------VHLLMELCAGGELFHRLEKY-GRFSETEARVIFRHLMQVVS 155
D Y Y + L+ME G L L+++ R + + + + +
Sbjct: 84 --DFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGME 141
Query: 156 YCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSP-----FYI 210
Y VHRDL NIL+ +++ +K+ADFGLA + ++ + V P F+
Sbjct: 142 YLGSRRCVHRDLAARNILVESEAH---VKIADFGLAKLLPLDKDYY-VVREPGQSPIFWY 197
Query: 211 APEVLAGG-YNQAADVWSAGVILYILLS 237
APE L+ +++ +DVWS GV+LY L +
Sbjct: 198 APESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 118/282 (41%), Gaps = 31/282 (10%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRL---VTVEDVRSIKLEIEIMTK 96
+R GK LG G FG + E + + A ++A L + + ++ E+++++
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 97 LSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLE-KYGRF--SETEARVIFR----- 148
L H N+V+L ++ E C G+L + L K F S+T ++
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 165
Query: 149 ----------HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQ 198
+ + +++ +HRDL NILL + K+ DFGLA IK
Sbjct: 166 DLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILL---THGRITKICDFGLARDIKNDS 222
Query: 199 N--LHGTVGSPF-YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDA 253
N + G P ++APE + Y +DVWS G+ L+ L S G P+ G F
Sbjct: 223 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYK 282
Query: 254 VRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVL 295
+ R S +H A D++ DP R T +++
Sbjct: 283 MIKEGFRMLSP--EHAPAEMYDIMKTCWDADPLKRPTFKQIV 322
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 113/266 (42%), Gaps = 41/266 (15%)
Query: 28 TILDATQISN------LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTV 81
T +D TQ+ + GK LG G FG + E + G+ A +A L +
Sbjct: 13 TFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKST 72
Query: 82 ---EDVRSIKLEIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKY--- 135
++ ++ E++IM+ L H N+V+L V ++ E C G+L + L +
Sbjct: 73 AHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEA 132
Query: 136 -------------------GRFSETEARVIF-RHLMQVVSYCHGNGVVHRDLKPENILLA 175
GR E + F + Q +++ +HRD+ N+LL
Sbjct: 133 MLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT 192
Query: 176 TKSSSSPIKLADFGLATYIKAGQN--LHGTVGSPF-YIAPE-VLAGGYNQAADVWSAGVI 231
+ K+ DFGLA I N + G P ++APE + Y +DVWS G++
Sbjct: 193 NGHVA---KIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGIL 249
Query: 232 LYILLS-GMPPFWG-KTKSKIFDAVR 255
L+ + S G+ P+ G SK + V+
Sbjct: 250 LWEIFSLGLNPYPGILVNSKFYKLVK 275
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 73/147 (49%), Gaps = 6/147 (4%)
Query: 101 PNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGN 160
P+VV + E + +++ L G +L L + G + A I R + + H
Sbjct: 94 PHVVPIHDFGEIDGQLYVDXRLINGVDLAAXLRRQGPLAPPRAVAIVRQIGSALDAAHAA 153
Query: 161 GVVHRDLKPENILLATKSSSSPIKLADFGL--ATYIKAGQNLHGTVGSPFYIAPEVLAGG 218
G HRD+KPENIL++ + L DFG+ AT + L TVG+ +Y APE +
Sbjct: 154 GATHRDVKPENILVSADDFA---YLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSES 210
Query: 219 Y-NQAADVWSAGVILYILLSGMPPFWG 244
+ AD+++ +LY L+G PP+ G
Sbjct: 211 HATYRADIYALTCVLYECLTGSPPYQG 237
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 86/186 (46%), Gaps = 12/186 (6%)
Query: 85 RSIKLEIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKY-GRFSETEA 143
R E IM + HPN++ L+ V ++ E G L L + G+F+ +
Sbjct: 95 RDFLSEASIMGQFD-HPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQL 153
Query: 144 RVIFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIK----AGQN 199
+ R + + Y G VHRDL N+L+ S+ K++DFGL+ ++ A
Sbjct: 154 VGMLRGVGAGMRYLSDLGYVHRDLAARNVLV---DSNLVCKVSDFGLSRVLEDDPDAAXT 210
Query: 200 LHGTVGSPFYIAPEVLA-GGYNQAADVWSAGVILY-ILLSGMPPFWGKTKSKIFDAVRAA 257
G + APE +A ++ A+DVWS GV+++ +L G P+W T + +V
Sbjct: 211 TTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEG 270
Query: 258 DLRFPS 263
R P+
Sbjct: 271 -YRLPA 275
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 119/271 (43%), Gaps = 23/271 (8%)
Query: 27 GTILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRS 86
G DA +I S R L +LG G FG + + T V A K++ + +
Sbjct: 4 GLAKDAWEIPRESLR--LEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEA 56
Query: 87 IKLEIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLE-KYGRFSETEARV 145
E ++M KL H +V L AV EE ++++ E G L L+ + G++ V
Sbjct: 57 FLQEAQVMKKLR-HEKLVQLYAVVSEEP-IYIVTEYMNKGSLLDFLKGETGKYLRLPQLV 114
Query: 146 -IFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTV 204
+ + ++Y VHRDL+ NIL+ K+ADFGLA I+ +
Sbjct: 115 DMSAQIASGMAYVERMNYVHRDLRAANILVGENLVC---KVADFGLARLIEDNE-YTARQ 170
Query: 205 GSPF---YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAVRAADL 259
G+ F + APE L G + +DVWS G++L L + G P+ G ++ D V
Sbjct: 171 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-Y 229
Query: 260 RFPSDPWDHISASARDLIMGMLRVDPSTRLT 290
R P P S DL+ R +P R T
Sbjct: 230 RMPCPP--ECPESLHDLMCQCWRKEPEERPT 258
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 93/195 (47%), Gaps = 25/195 (12%)
Query: 90 EIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRL-EKYGRFSETEARVIFR 148
E IM + S H N++ L+ V + + ++ E G L L EK G FS + + R
Sbjct: 96 EAGIMGQFSHH-NIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLR 154
Query: 149 HLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGL---------ATYIKAGQN 199
+ + Y VHRDL NIL+ +S+ K++DFGL ATY +G
Sbjct: 155 GIAAGMKYLANMNYVHRDLAARNILV---NSNLVCKVSDFGLSRVLEDDPEATYTTSGGK 211
Query: 200 LHGTVGSPF-YIAPEVLA-GGYNQAADVWSAGVILY-ILLSGMPPFWGKTKSKIFDAVRA 256
+ P + APE ++ + A+DVWS G++++ ++ G P+W + ++ A+
Sbjct: 212 I------PIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAIND 265
Query: 257 ADLRFPSDPWDHISA 271
R P+ P D SA
Sbjct: 266 G-FRLPT-PMDCPSA 278
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 119/271 (43%), Gaps = 23/271 (8%)
Query: 27 GTILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRS 86
G DA +I S R L +LG G FG + + T V A K++ + +
Sbjct: 4 GLAKDAWEIPRESLR--LEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEA 56
Query: 87 IKLEIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLE-KYGRFSETEARV 145
E ++M KL H +V L AV EE ++++ E G L L+ + G++ V
Sbjct: 57 FLQEAQVMKKLR-HEKLVQLYAVVSEEP-IYIVTEYMNKGSLLDFLKGETGKYLRLPQLV 114
Query: 146 -IFRHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTV 204
+ + ++Y VHRDL+ NIL+ K+ADFGLA I+ +
Sbjct: 115 DMSAQIASGMAYVERMNYVHRDLRAANILVGENLVC---KVADFGLARLIEDNE-WTARQ 170
Query: 205 GSPF---YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAVRAADL 259
G+ F + APE L G + +DVWS G++L L + G P+ G ++ D V
Sbjct: 171 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-Y 229
Query: 260 RFPSDPWDHISASARDLIMGMLRVDPSTRLT 290
R P P S DL+ R +P R T
Sbjct: 230 RMPCPP--ECPESLHDLMCQCWRKEPEERPT 258
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 131/318 (41%), Gaps = 35/318 (11%)
Query: 9 SSQLSTQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRE-----CSDKF 63
+S + T + +Y + T +I D ++ + + G LG G FG + E +
Sbjct: 2 TSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITLIRG--LGHGAFGEVYEGQVSGMPNDP 59
Query: 64 TGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELC 123
+ +A K++ + + + +D +E I++KL+ H N+V V + +L+EL
Sbjct: 60 SPLQVAVKTLPE--VCSEQDELDFLMEALIISKLN-HQNIVRCIGVSLQSLPRFILLELM 116
Query: 124 AGGELFHRLEKYGRFSETEARVIFRHLMQVV-------SYCHGNGVVHRDLKPENILLAT 176
AGG+L L + + + L+ V Y N +HRD+ N LL
Sbjct: 117 AGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTC 176
Query: 177 KSSSSPIKLADFGL------ATYIKAGQNLHGTVGSPF-YIAPEVLAGG-YNQAADVWSA 228
K+ DFG+ A+Y + G G P ++ PE G + D WS
Sbjct: 177 PGPGRVAKIGDFGMARDIYRASYYRKG----GCAMLPVKWMPPEAFMEGIFTSKTDTWSF 232
Query: 229 GVILYILLS-GMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVDPST 287
GV+L+ + S G P+ K+ ++ + V + DP + ++ + P
Sbjct: 233 GVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRM---DPPKNCPGPVYRIMTQCWQHQPED 289
Query: 288 RLTAAEVLAHSWMEECEQ 305
R A +L +E C Q
Sbjct: 290 RPNFAIILER--IEYCTQ 305
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 22/206 (10%)
Query: 44 LGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNV 103
L + +G G+FG + + G +A K I D ++ E +MT+L H N+
Sbjct: 16 LLQTIGKGEFGDV--MLGDYRGNKVAVKCIKND-----ATAQAFLAEASVMTQLR-HSNL 67
Query: 104 VDLKAVY-EEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQV---VSYCHG 159
V L V EE+ ++++ E A G L L GR S + + + V + Y G
Sbjct: 68 VQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEG 126
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF-YIAPEVL-AG 217
N VHRDL N+L+ S + K++DFGL + Q+ T P + APE L
Sbjct: 127 NNFVHRDLAARNVLV---SEDNVAKVSDFGLTKEASSTQD---TGKLPVKWTAPEALREA 180
Query: 218 GYNQAADVWSAGVILYILLS-GMPPF 242
++ +DVWS G++L+ + S G P+
Sbjct: 181 AFSTKSDVWSFGILLWEIYSFGRVPY 206
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 29/208 (13%)
Query: 47 QLGWGQFGVIRECS-DKF---TGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPN 102
QLG G FG + C D TG ++A K + + R + EI+I+ L
Sbjct: 14 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS---GPDQQRDFQREIQILKALHS--- 67
Query: 103 VVDLKAVYEEEDY------VHLLMELCAGGELFHRLEKY-GRFSETEARVIFRHLMQVVS 155
D Y Y + L+ME G L L+++ R + + + + +
Sbjct: 68 --DFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGME 125
Query: 156 YCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSP-----FYI 210
Y VHRDL NIL+ +++ +K+ADFGLA + ++ V P F+
Sbjct: 126 YLGSRRCVHRDLAARNILVESEAH---VKIADFGLAKLLPLDKDXX-VVREPGQSPIFWY 181
Query: 211 APEVLAGG-YNQAADVWSAGVILYILLS 237
APE L+ +++ +DVWS GV+LY L +
Sbjct: 182 APESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 95/208 (45%), Gaps = 16/208 (7%)
Query: 90 EIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLE-KYGRFSETEARV-IF 147
E ++M KL H +V L AV EE + ++ E + G L L+ + G++ V +
Sbjct: 53 EAQVMKKLR-HEKLVQLYAVVSEEP-IXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMA 110
Query: 148 RHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSP 207
+ ++Y VHRDL+ NIL+ K+ADFGLA I+ + G+
Sbjct: 111 AQIASGMAYVERMNYVHRDLRAANILVGENLVC---KVADFGLARLIEDNEX-TARQGAK 166
Query: 208 F---YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAVRAADLRFP 262
F + APE L G + +DVWS G++L L + G P+ G ++ D V R P
Sbjct: 167 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMP 225
Query: 263 SDPWDHISASARDLIMGMLRVDPSTRLT 290
P S DL+ R +P R T
Sbjct: 226 CPP--ECPESLHDLMCQCWRKEPEERPT 251
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 97/206 (47%), Gaps = 22/206 (10%)
Query: 44 LGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNV 103
L + +G G+FG + + G +A K I D ++ E +MT+L H N+
Sbjct: 25 LLQTIGKGEFGDV--MLGDYRGNKVAVKCIKND-----ATAQAFLAEASVMTQLR-HSNL 76
Query: 104 VDLKAV-YEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQV---VSYCHG 159
V L V EE+ ++++ E A G L L GR S + + + V + Y G
Sbjct: 77 VQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEG 135
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF-YIAPEVL-AG 217
N VHRDL N+L+ S + K++DFGL K + T P + APE L
Sbjct: 136 NNFVHRDLAARNVLV---SEDNVAKVSDFGLT---KEASSTQDTGKLPVKWTAPEALREK 189
Query: 218 GYNQAADVWSAGVILYILLS-GMPPF 242
++ +DVWS G++L+ + S G P+
Sbjct: 190 KFSTKSDVWSFGILLWEIYSFGRVPY 215
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 113/268 (42%), Gaps = 25/268 (9%)
Query: 47 QLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDL 106
+LG G +GV+ + +G++ A K I V ++ + + +++I + P V
Sbjct: 41 ELGRGAYGVVEKXRHVPSGQIXAVKRIRA--TVNSQEQKRLLXDLDISXRTVDCPFTVTF 98
Query: 107 KAVYEEEDYVHLLMELCAGG-ELFHR--LEKYGRFSETEARVIFRHLMQVVSYCHGN-GV 162
E V + EL + F++ ++K E I +++ + + H V
Sbjct: 99 YGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV 158
Query: 163 VHRDLKPENILLATKSSSSPIKLADFGLATY--------IKAGQNLHGTVGSPFYIAPEV 214
+HRD+KP N+L+ ++ +K DFG++ Y I AG + +P I PE+
Sbjct: 159 IHRDVKPSNVLI---NALGQVKXCDFGISGYLVDDVAKDIDAGCKPYX---APERINPEL 212
Query: 215 LAGGYNQAADVWSAGVILYILLSGMPPF--WGKTKSKIFDAVRAADLRFPSDPWDHISAS 272
GY+ +D+WS G+ L P+ WG ++ V P P D SA
Sbjct: 213 NQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEPS---PQLPADKFSAE 269
Query: 273 ARDLIMGMLRVDPSTRLTAAEVLAHSWM 300
D L+ + R T E+ H +
Sbjct: 270 FVDFTSQCLKKNSKERPTYPELXQHPFF 297
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 97/206 (47%), Gaps = 22/206 (10%)
Query: 44 LGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNV 103
L + +G G+FG + + G +A K I D ++ E +MT+L H N+
Sbjct: 10 LLQTIGKGEFGDV--MLGDYRGNKVAVKCIKND-----ATAQAFLAEASVMTQLR-HSNL 61
Query: 104 VDLKAV-YEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQV---VSYCHG 159
V L V EE+ ++++ E A G L L GR S + + + V + Y G
Sbjct: 62 VQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEG 120
Query: 160 NGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF-YIAPEVL-AG 217
N VHRDL N+L+ S + K++DFGL K + T P + APE L
Sbjct: 121 NNFVHRDLAARNVLV---SEDNVAKVSDFGLT---KEASSTQDTGKLPVKWTAPEALREK 174
Query: 218 GYNQAADVWSAGVILYILLS-GMPPF 242
++ +DVWS G++L+ + S G P+
Sbjct: 175 KFSTKSDVWSFGILLWEIYSFGRVPY 200
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 130/314 (41%), Gaps = 27/314 (8%)
Query: 9 SSQLSTQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRE-----CSDKF 63
+S + T + +Y + T +I D ++ + + G LG G FG + E +
Sbjct: 19 TSTIMTDYNPNYCFAGKTSSISDLKEVPRKNITLIRG--LGHGAFGEVYEGQVSGMPNDP 76
Query: 64 TGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELC 123
+ +A K++ + + + +D +E I++K + H N+V V + +L+EL
Sbjct: 77 SPLQVAVKTLPE--VCSEQDELDFLMEALIISKFN-HQNIVRCIGVSLQSLPRFILLELM 133
Query: 124 AGGELFHRLEKYGRFSETEARVIFRHLMQVV-------SYCHGNGVVHRDLKPENILLAT 176
AGG+L L + + + L+ V Y N +HRD+ N LL
Sbjct: 134 AGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTC 193
Query: 177 KSSSSPIKLADFGLATYI-KAGQNLHGTVGS-PF-YIAPEVLAGG-YNQAADVWSAGVIL 232
K+ DFG+A I +AG G P ++ PE G + D WS GV+L
Sbjct: 194 PGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLL 253
Query: 233 YILLS-GMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTA 291
+ + S G P+ K+ ++ + V + DP + ++ + P R
Sbjct: 254 WEIFSLGYMPYPSKSNQEVLEFVTSGGRM---DPPKNCPGPVYRIMTQCWQHQPEDRPNF 310
Query: 292 AEVLAHSWMEECEQ 305
A +L +E C Q
Sbjct: 311 AIILER--IEYCTQ 322
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 64/112 (57%), Gaps = 17/112 (15%)
Query: 139 SETEARVIFRHLMQVVSYCHGNG----VVHRDLKPENILLATKSSSSPIKLADFGLATYI 194
+ET +R + +L + V +C G G + HRD K +N+LL + ++ LADFGLA
Sbjct: 118 AETMSRGL-SYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAV---LADFGLAVRF 173
Query: 195 KAGQ---NLHGTVGSPFYIAPEVLAGGYN------QAADVWSAGVILYILLS 237
+ G+ + HG VG+ Y+APEVL G N D+++ G++L+ L+S
Sbjct: 174 EPGKPPGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 112/232 (48%), Gaps = 22/232 (9%)
Query: 31 DATQISNLSDRYVLGKQLGWGQFG-VIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKL 89
DA +I S + L K+LG GQFG V +K T +A K++ + V +
Sbjct: 181 DAWEIPRESLK--LEKKLGAGQFGEVWMATYNKHTK--VAVKTMKPGSM----SVEAFLA 232
Query: 90 EIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVI--F 147
E +M L H +V L AV +E ++++ E A G L L+ + ++I
Sbjct: 233 EANVMKTLQ-HDKLVKLHAVVTKEP-IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFS 290
Query: 148 RHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSP 207
+ + +++ +HRDL+ NIL+ S+S K+ADFGLA I+ + G+
Sbjct: 291 AQIAEGMAFIEQRNYIHRDLRAANILV---SASLVCKIADFGLARVIEDNE-YTAREGAK 346
Query: 208 F---YIAPEVLA-GGYNQAADVWSAGVILY-ILLSGMPPFWGKTKSKIFDAV 254
F + APE + G + +DVWS G++L I+ G P+ G + ++ A+
Sbjct: 347 FPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRAL 398
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 130/318 (40%), Gaps = 35/318 (11%)
Query: 9 SSQLSTQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRE-----CSDKF 63
+S + T + +Y + T +I D ++ + + G LG G FG + E +
Sbjct: 2 TSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITLIRG--LGHGAFGEVYEGQVSGMPNDP 59
Query: 64 TGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELC 123
+ +A K++ + + + +D +E I++K + H N+V V + +L+EL
Sbjct: 60 SPLQVAVKTLPE--VCSEQDELDFLMEALIISKFN-HQNIVRCIGVSLQSLPRFILLELM 116
Query: 124 AGGELFHRLEKYGRFSETEARVIFRHLMQVV-------SYCHGNGVVHRDLKPENILLAT 176
AGG+L L + + + L+ V Y N +HRD+ N LL
Sbjct: 117 AGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTC 176
Query: 177 KSSSSPIKLADFGL------ATYIKAGQNLHGTVGSPF-YIAPEVLAGG-YNQAADVWSA 228
K+ DFG+ A+Y + G G P ++ PE G + D WS
Sbjct: 177 PGPGRVAKIGDFGMAQDIYRASYYRKG----GCAMLPVKWMPPEAFMEGIFTSKTDTWSF 232
Query: 229 GVILYILLS-GMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVDPST 287
GV+L+ + S G P+ K+ ++ + V + DP + ++ + P
Sbjct: 233 GVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRM---DPPKNCPGPVYRIMTQCWQHQPED 289
Query: 288 RLTAAEVLAHSWMEECEQ 305
R A +L +E C Q
Sbjct: 290 RPNFAIILER--IEYCTQ 305
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 130/318 (40%), Gaps = 35/318 (11%)
Query: 9 SSQLSTQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRE-----CSDKF 63
+S + T + +Y + T +I D ++ + + G LG G FG + E +
Sbjct: 8 TSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITLIRG--LGHGAFGEVYEGQVSGMPNDP 65
Query: 64 TGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELC 123
+ +A K++ + + + +D +E I++K + H N+V V + +L+EL
Sbjct: 66 SPLQVAVKTLPE--VCSEQDELDFLMEALIISKFN-HQNIVRCIGVSLQSLPRFILLELM 122
Query: 124 AGGELFHRLEKYGRFSETEARVIFRHLMQVV-------SYCHGNGVVHRDLKPENILLAT 176
AGG+L L + + + L+ V Y N +HRD+ N LL
Sbjct: 123 AGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTC 182
Query: 177 KSSSSPIKLADFGL------ATYIKAGQNLHGTVGSPF-YIAPEVLAGG-YNQAADVWSA 228
K+ DFG+ A+Y + G G P ++ PE G + D WS
Sbjct: 183 PGPGRVAKIGDFGMARDIYRASYYRKG----GCAMLPVKWMPPEAFMEGIFTSKTDTWSF 238
Query: 229 GVILYILLS-GMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVDPST 287
GV+L+ + S G P+ K+ ++ + V + DP + ++ + P
Sbjct: 239 GVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRM---DPPKNCPGPVYRIMTQCWQHQPED 295
Query: 288 RLTAAEVLAHSWMEECEQ 305
R A +L +E C Q
Sbjct: 296 RPNFAIILER--IEYCTQ 311
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 130/314 (41%), Gaps = 27/314 (8%)
Query: 9 SSQLSTQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRE-----CSDKF 63
+S + T + +Y + T +I D ++ + + G LG G FG + E +
Sbjct: 42 TSTIMTDYNPNYCFAGKTSSISDLKEVPRKNITLIRG--LGHGAFGEVYEGQVSGMPNDP 99
Query: 64 TGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELC 123
+ +A K++ + + + +D +E I++K + H N+V V + +L+EL
Sbjct: 100 SPLQVAVKTLPE--VCSEQDELDFLMEALIISKFN-HQNIVRCIGVSLQSLPRFILLELM 156
Query: 124 AGGELFHRLEKYGRFSETEARVIFRHLMQVV-------SYCHGNGVVHRDLKPENILLAT 176
AGG+L L + + + L+ V Y N +HRD+ N LL
Sbjct: 157 AGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTC 216
Query: 177 KSSSSPIKLADFGLATYI-KAGQNLHGTVGS-PF-YIAPEVLAGG-YNQAADVWSAGVIL 232
K+ DFG+A I +AG G P ++ PE G + D WS GV+L
Sbjct: 217 PGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLL 276
Query: 233 YILLS-GMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTA 291
+ + S G P+ K+ ++ + V + DP + ++ + P R
Sbjct: 277 WEIFSLGYMPYPSKSNQEVLEFVTSGGRM---DPPKNCPGPVYRIMTQCWQHQPEDRPNF 333
Query: 292 AEVLAHSWMEECEQ 305
A +L +E C Q
Sbjct: 334 AIILER--IEYCTQ 345
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 112/232 (48%), Gaps = 22/232 (9%)
Query: 31 DATQISNLSDRYVLGKQLGWGQFG-VIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKL 89
DA +I S + L K+LG GQFG V +K T +A K++ + V +
Sbjct: 8 DAWEIPRESLK--LEKKLGAGQFGEVWMATYNKHTK--VAVKTMKPGSM----SVEAFLA 59
Query: 90 EIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVI--F 147
E +M L H +V L AV +E ++++ E A G L L+ + ++I
Sbjct: 60 EANVMKTLQ-HDKLVKLHAVVTKEP-IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFS 117
Query: 148 RHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSP 207
+ + +++ +HRDL+ NIL+ S+S K+ADFGLA I+ + G+
Sbjct: 118 AQIAEGMAFIEQRNYIHRDLRAANILV---SASLVCKIADFGLARVIEDNE-YTAREGAK 173
Query: 208 F---YIAPEVLA-GGYNQAADVWSAGVILY-ILLSGMPPFWGKTKSKIFDAV 254
F + APE + G + +DVWS G++L I+ G P+ G + ++ A+
Sbjct: 174 FPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRAL 225
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 103/217 (47%), Gaps = 22/217 (10%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLA-----CKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH 100
K+LG G FG +++ + V K+ A D + E + E +M +L +
Sbjct: 33 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDE----LLAEANVMQQLD-N 87
Query: 101 PNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGN 160
P +V + + E E ++ L+ME+ G L L++ + + + + Y +
Sbjct: 88 PYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES 146
Query: 161 GVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNL-----HGTVGSPFYIAPEVL 215
VHRDL N+LL T+ + K++DFGL+ ++A +N HG +Y APE +
Sbjct: 147 NFVHRDLAARNVLLVTQHYA---KISDFGLSKALRADENYYKAQTHGKWPVKWY-APECI 202
Query: 216 A-GGYNQAADVWSAGVILYILLS-GMPPFWGKTKSKI 250
++ +DVWS GV+++ S G P+ G S++
Sbjct: 203 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 239
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 103/217 (47%), Gaps = 22/217 (10%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLA-----CKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH 100
K+LG G FG +++ + V K+ A D + E + E +M +L +
Sbjct: 33 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDE----LLAEANVMQQLD-N 87
Query: 101 PNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGN 160
P +V + + E E ++ L+ME+ G L L++ + + + + Y +
Sbjct: 88 PYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES 146
Query: 161 GVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNL-----HGTVGSPFYIAPEVL 215
VHRDL N+LL T+ + K++DFGL+ ++A +N HG +Y APE +
Sbjct: 147 NFVHRDLAARNVLLVTQHYA---KISDFGLSKALRADENYYKAQTHGKWPVKWY-APECI 202
Query: 216 A-GGYNQAADVWSAGVILYILLS-GMPPFWGKTKSKI 250
++ +DVWS GV+++ S G P+ G S++
Sbjct: 203 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 239
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 130/318 (40%), Gaps = 35/318 (11%)
Query: 9 SSQLSTQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRE-----CSDKF 63
+S + T + +Y + T +I D ++ + + G LG G FG + E +
Sbjct: 28 TSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITLIRG--LGHGAFGEVYEGQVSGMPNDP 85
Query: 64 TGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELC 123
+ +A K++ + + + +D +E I++K + H N+V V + +L+EL
Sbjct: 86 SPLQVAVKTLPE--VCSEQDELDFLMEALIISKFN-HQNIVRCIGVSLQSLPRFILLELM 142
Query: 124 AGGELFHRLEKYGRFSETEARVIFRHLMQVV-------SYCHGNGVVHRDLKPENILLAT 176
AGG+L L + + + L+ V Y N +HRD+ N LL
Sbjct: 143 AGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTC 202
Query: 177 KSSSSPIKLADFGL------ATYIKAGQNLHGTVGSPF-YIAPEVLAGG-YNQAADVWSA 228
K+ DFG+ A+Y + G G P ++ PE G + D WS
Sbjct: 203 PGPGRVAKIGDFGMARDIYRASYYRKG----GCAMLPVKWMPPEAFMEGIFTSKTDTWSF 258
Query: 229 GVILYILLS-GMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVDPST 287
GV+L+ + S G P+ K+ ++ + V + DP + ++ + P
Sbjct: 259 GVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR---MDPPKNCPGPVYRIMTQCWQHQPED 315
Query: 288 RLTAAEVLAHSWMEECEQ 305
R A +L +E C Q
Sbjct: 316 RPNFAIILER--IEYCTQ 331
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 130/318 (40%), Gaps = 35/318 (11%)
Query: 9 SSQLSTQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRE-----CSDKF 63
+S + T + +Y + T +I D ++ + + G LG G FG + E +
Sbjct: 2 TSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITLIRG--LGHGAFGEVYEGQVSGMPNDP 59
Query: 64 TGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELC 123
+ +A K++ + + + +D +E I++K + H N+V V + +L+EL
Sbjct: 60 SPLQVAVKTLPE--VCSEQDELDFLMEALIISKFN-HQNIVRCIGVSLQSLPRFILLELM 116
Query: 124 AGGELFHRLEKYGRFSETEARVIFRHLMQVV-------SYCHGNGVVHRDLKPENILLAT 176
AGG+L L + + + L+ V Y N +HRD+ N LL
Sbjct: 117 AGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTC 176
Query: 177 KSSSSPIKLADFGL------ATYIKAGQNLHGTVGSPF-YIAPEVLAGG-YNQAADVWSA 228
K+ DFG+ A+Y + G G P ++ PE G + D WS
Sbjct: 177 PGPGRVAKIGDFGMARDIYRASYYRKG----GCAMLPVKWMPPEAFMEGIFTSKTDTWSF 232
Query: 229 GVILYILLS-GMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVDPST 287
GV+L+ + S G P+ K+ ++ + V + DP + ++ + P
Sbjct: 233 GVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRM---DPPKNCPGPVYRIMTQCWQHQPED 289
Query: 288 RLTAAEVLAHSWMEECEQ 305
R A +L +E C Q
Sbjct: 290 RPNFAIILER--IEYCTQ 305
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 103/217 (47%), Gaps = 22/217 (10%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLA-----CKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH 100
K+LG G FG +++ + V K+ A D + E + E +M +L +
Sbjct: 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDE----LLAEANVMQQLD-N 429
Query: 101 PNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGN 160
P +V + + E E ++ L+ME+ G L L++ + + + + Y +
Sbjct: 430 PYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES 488
Query: 161 GVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNL-----HGTVGSPFYIAPEVL 215
VHRDL N+LL T+ + K++DFGL+ ++A +N HG +Y APE +
Sbjct: 489 NFVHRDLAARNVLLVTQHYA---KISDFGLSKALRADENYYKAQTHGKWPVKWY-APECI 544
Query: 216 A-GGYNQAADVWSAGVILYILLS-GMPPFWGKTKSKI 250
++ +DVWS GV+++ S G P+ G S++
Sbjct: 545 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 581
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 103/217 (47%), Gaps = 22/217 (10%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLA-----CKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH 100
K+LG G FG +++ + V K+ A D + E + E +M +L +
Sbjct: 11 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDE----LLAEANVMQQLD-N 65
Query: 101 PNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGN 160
P +V + + E E ++ L+ME+ G L L++ + + + + Y +
Sbjct: 66 PYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES 124
Query: 161 GVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNL-----HGTVGSPFYIAPEVL 215
VHRDL N+LL T+ + K++DFGL+ ++A +N HG +Y APE +
Sbjct: 125 NFVHRDLAARNVLLVTQHYA---KISDFGLSKALRADENYYKAQTHGKWPVKWY-APECI 180
Query: 216 A-GGYNQAADVWSAGVILYILLS-GMPPFWGKTKSKI 250
++ +DVWS GV+++ S G P+ G S++
Sbjct: 181 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 217
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 103/217 (47%), Gaps = 22/217 (10%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLA-----CKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH 100
K+LG G FG +++ + V K+ A D + E + E +M +L +
Sbjct: 31 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDE----LLAEANVMQQLD-N 85
Query: 101 PNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGN 160
P +V + + E E ++ L+ME+ G L L++ + + + + Y +
Sbjct: 86 PYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES 144
Query: 161 GVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNL-----HGTVGSPFYIAPEVL 215
VHRDL N+LL T+ + K++DFGL+ ++A +N HG +Y APE +
Sbjct: 145 NFVHRDLAARNVLLVTQHYA---KISDFGLSKALRADENYYKAQTHGKWPVKWY-APECI 200
Query: 216 A-GGYNQAADVWSAGVILYILLS-GMPPFWGKTKSKI 250
++ +DVWS GV+++ S G P+ G S++
Sbjct: 201 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 237
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 103/217 (47%), Gaps = 22/217 (10%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLA-----CKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH 100
K+LG G FG +++ + V K+ A D + E + E +M +L +
Sbjct: 17 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDE----LLAEANVMQQLD-N 71
Query: 101 PNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGN 160
P +V + + E E ++ L+ME+ G L L++ + + + + Y +
Sbjct: 72 PYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES 130
Query: 161 GVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNL-----HGTVGSPFYIAPEVL 215
VHRDL N+LL T+ + K++DFGL+ ++A +N HG +Y APE +
Sbjct: 131 NFVHRDLAARNVLLVTQHYA---KISDFGLSKALRADENXYKAQTHGKWPVKWY-APECI 186
Query: 216 A-GGYNQAADVWSAGVILYILLS-GMPPFWGKTKSKI 250
++ +DVWS GV+++ S G P+ G S++
Sbjct: 187 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 223
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 103/217 (47%), Gaps = 22/217 (10%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLA-----CKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH 100
K+LG G FG +++ + V K+ A D + E + E +M +L +
Sbjct: 376 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDE----LLAEANVMQQLD-N 430
Query: 101 PNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGN 160
P +V + + E E ++ L+ME+ G L L++ + + + + Y +
Sbjct: 431 PYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES 489
Query: 161 GVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNL-----HGTVGSPFYIAPEVL 215
VHRDL N+LL T+ + K++DFGL+ ++A +N HG +Y APE +
Sbjct: 490 NFVHRDLAARNVLLVTQHYA---KISDFGLSKALRADENYYKAQTHGKWPVKWY-APECI 545
Query: 216 A-GGYNQAADVWSAGVILYILLS-GMPPFWGKTKSKI 250
++ +DVWS GV+++ S G P+ G S++
Sbjct: 546 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 582
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 103/217 (47%), Gaps = 22/217 (10%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLA-----CKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH 100
K+LG G FG +++ + V K+ A D + E + E +M +L +
Sbjct: 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDE----LLAEANVMQQLD-N 67
Query: 101 PNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGN 160
P +V + + E E ++ L+ME+ G L L++ + + + + Y +
Sbjct: 68 PYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES 126
Query: 161 GVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNL-----HGTVGSPFYIAPEVL 215
VHRDL N+LL T+ + K++DFGL+ ++A +N HG +Y APE +
Sbjct: 127 NFVHRDLAARNVLLVTQHYA---KISDFGLSKALRADENYYKAQTHGKWPVKWY-APECI 182
Query: 216 A-GGYNQAADVWSAGVILYILLS-GMPPFWGKTKSKI 250
++ +DVWS GV+++ S G P+ G S++
Sbjct: 183 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 219
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 103/217 (47%), Gaps = 22/217 (10%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLA-----CKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH 100
K+LG G FG +++ + V K+ A D + E + E +M +L +
Sbjct: 17 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDE----LLAEANVMQQLD-N 71
Query: 101 PNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGN 160
P +V + + E E ++ L+ME+ G L L++ + + + + Y +
Sbjct: 72 PYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES 130
Query: 161 GVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNL-----HGTVGSPFYIAPEVL 215
VHRDL N+LL T+ + K++DFGL+ ++A +N HG +Y APE +
Sbjct: 131 NFVHRDLAARNVLLVTQHYA---KISDFGLSKALRADENYYKAQTHGKWPVKWY-APECI 186
Query: 216 A-GGYNQAADVWSAGVILYILLS-GMPPFWGKTKSKI 250
++ +DVWS GV+++ S G P+ G S++
Sbjct: 187 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 223
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 103/217 (47%), Gaps = 22/217 (10%)
Query: 46 KQLGWGQFGVIRECSDKFTGEVLA-----CKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH 100
K+LG G FG +++ + V K+ A D + E + E +M +L +
Sbjct: 23 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDE----LLAEANVMQQLD-N 77
Query: 101 PNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQVVSYCHGN 160
P +V + + E E ++ L+ME+ G L L++ + + + + Y +
Sbjct: 78 PYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES 136
Query: 161 GVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNL-----HGTVGSPFYIAPEVL 215
VHRDL N+LL T+ + K++DFGL+ ++A +N HG +Y APE +
Sbjct: 137 NFVHRDLAARNVLLVTQHYA---KISDFGLSKALRADENYYKAQTHGKWPVKWY-APECI 192
Query: 216 A-GGYNQAADVWSAGVILYILLS-GMPPFWGKTKSKI 250
++ +DVWS GV+++ S G P+ G S++
Sbjct: 193 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 229
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 105/236 (44%), Gaps = 21/236 (8%)
Query: 18 NSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIR--ECSDKFTGEVLACKSIAK 75
+S ++ + ++ ++ SDR V+GK G FGV+ E D+ + C +
Sbjct: 4 DSALLAEVKDVLIPHERVVTHSDR-VIGK----GHFGVVYHGEYIDQAQNRI-QCAIKSL 57
Query: 76 DRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVY-EEEDYVHLLMELCAGGELFHRLEK 134
R+ ++ V + E +M L+ HPNV+ L + E H+L+ G+L +
Sbjct: 58 SRITEMQQVEAFLREGLLMRGLN-HPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRS 116
Query: 135 YGRFSETEARVIF-RHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLAT- 192
R + + F + + + Y VHRDL N +L S +K+ADFGLA
Sbjct: 117 PQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCML---DESFTVKVADFGLARD 173
Query: 193 -----YIKAGQNLHGTVGSPFYIAPEVLAGGYNQAADVWSAGVILYILLS-GMPPF 242
Y Q+ H + + + + +DVWS GV+L+ LL+ G PP+
Sbjct: 174 ILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPY 229
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 78/160 (48%), Gaps = 17/160 (10%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRS----IKLEIEI 93
+ +RY LG+++G G FG I +D GE +A K +E V++ + +E +I
Sbjct: 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIK---------LECVKTKHPQLHIESKI 57
Query: 94 MTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGG--ELFHRLEKYGRFSETEARVIFRHLM 151
+ G + ++ E DY ++MEL +LF+ + +FS ++ ++
Sbjct: 58 YKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSR--KFSLKTVLLLADQMI 115
Query: 152 QVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLA 191
+ Y H +HRD+KP+N L+ + + + DFGLA
Sbjct: 116 SRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 127/281 (45%), Gaps = 39/281 (13%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIE------I 93
++ L ++LG G FG++ E + + +++ ++ + + TV + S++ IE +
Sbjct: 17 EKITLLRELGQGSFGMVYEGNAR---DIIKGEAETRVAVKTVNESASLRERIEFLNEASV 73
Query: 94 MTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGEL---FHRLEKYGRFSETEARVIFRHL 150
M + H +VV L V + ++MEL A G+L L + + +
Sbjct: 74 MKGFTCH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 151 MQV-------VSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGL-------ATYIKA 196
+Q+ ++Y + VHRDL N ++A + +K+ DFG+ A Y K
Sbjct: 133 IQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFT---VKIGDFGMTRDIYETAYYRKG 189
Query: 197 GQNLHGTVGSPFYIAPEVLAGG-YNQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAV 254
G+ L ++APE L G + ++D+WS GV+L+ + S P+ G + ++ V
Sbjct: 190 GKGLLPVR----WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFV 245
Query: 255 RAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVL 295
D + P D+ DL+ + +P R T E++
Sbjct: 246 --MDGGYLDQP-DNCPERVTDLMRMCWQFNPKMRPTFLEIV 283
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 78/160 (48%), Gaps = 17/160 (10%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRS----IKLEIEI 93
+ +RY LG+++G G FG I +D GE +A K +E V++ + +E +I
Sbjct: 5 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIK---------LECVKTKHPQLHIESKI 55
Query: 94 MTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGG--ELFHRLEKYGRFSETEARVIFRHLM 151
+ G + ++ E DY ++MEL +LF+ + +FS ++ ++
Sbjct: 56 YKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSR--KFSLKTVLLLADQMI 113
Query: 152 QVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLA 191
+ Y H +HRD+KP+N L+ + + + DFGLA
Sbjct: 114 SRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 153
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 114/256 (44%), Gaps = 25/256 (9%)
Query: 44 LGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNV 103
L K+LG GQFG + + G K ++ E S E +IM KL H +
Sbjct: 13 LIKRLGNGQFGEV--WMGTWNGNTKVAIKTLKPGTMSPE---SFLEEAQIMKKLK-HDKL 66
Query: 104 VDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQV---VSYCHGN 160
V L AV EE ++++ E G L L K G + + QV ++Y
Sbjct: 67 VQLYAVVSEEP-IYIVTEYMNKGSLLDFL-KDGEGRALKLPNLVDMAAQVAAGMAYIERM 124
Query: 161 GVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF---YIAPEV-LA 216
+HRDL+ NIL+ + K+ADFGLA I+ + G+ F + APE L
Sbjct: 125 NYIHRDLRSANILVG---NGLICKIADFGLARLIEDNEXT-ARQGAKFPIKWTAPEAALY 180
Query: 217 GGYNQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAV-RAADLRFPSDPWDHISASAR 274
G + +DVWS G++L L++ G P+ G ++ + V R + P D S
Sbjct: 181 GRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQD----CPISLH 236
Query: 275 DLIMGMLRVDPSTRLT 290
+L++ + DP R T
Sbjct: 237 ELMIHCWKKDPEERPT 252
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 130/318 (40%), Gaps = 35/318 (11%)
Query: 9 SSQLSTQFCNSYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRE-----CSDKF 63
+S + T + +Y + T +I D ++ + + G LG G FG + E +
Sbjct: 18 TSTIMTDYNPNYCFAGKTSSISDLKEVPRKNITLIRG--LGHGAFGEVYEGQVSGMPNDP 75
Query: 64 TGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELC 123
+ +A K++ + + + +D +E I++K + H N+V V + +L+EL
Sbjct: 76 SPLQVAVKTLPE--VCSEQDELDFLMEALIISKFN-HQNIVRCIGVSLQSLPRFILLELM 132
Query: 124 AGGELFHRLEKYGRFSETEARVIFRHLMQVV-------SYCHGNGVVHRDLKPENILLAT 176
AGG+L L + + + L+ V Y N +HRD+ N LL
Sbjct: 133 AGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTC 192
Query: 177 KSSSSPIKLADFGL------ATYIKAGQNLHGTVGSPF-YIAPEVLAGG-YNQAADVWSA 228
K+ DFG+ A+Y + G G P ++ PE G + D WS
Sbjct: 193 PGPGRVAKIGDFGMARDIYRASYYRKG----GCAMLPVKWMPPEAFMEGIFTSKTDTWSF 248
Query: 229 GVILYILLS-GMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVDPST 287
GV+L+ + S G P+ K+ ++ + V + DP + ++ + P
Sbjct: 249 GVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRM---DPPKNCPGPVYRIMTQCWQHQPED 305
Query: 288 RLTAAEVLAHSWMEECEQ 305
R A +L +E C Q
Sbjct: 306 RPNFAIILER--IEYCTQ 321
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 110/232 (47%), Gaps = 32/232 (13%)
Query: 31 DATQISNLSDRYVLGKQLGWGQFG-VIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKL 89
DA +I S + L K+LG GQFG V +K T +A K++ + V +
Sbjct: 175 DAWEIPRESLK--LEKKLGAGQFGEVWMATYNKHTK--VAVKTMKPGSM----SVEAFLA 226
Query: 90 EIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVI--F 147
E +M L H +V L AV +E ++++ E A G L L+ + ++I
Sbjct: 227 EANVMKTLQ-HDKLVKLHAVVTKEP-IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFS 284
Query: 148 RHLMQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSP 207
+ + +++ +HRDL+ NIL+ S+S K+ADFGLA VG+
Sbjct: 285 AQIAEGMAFIEQRNYIHRDLRAANILV---SASLVCKIADFGLAR-----------VGAK 330
Query: 208 F---YIAPEVLA-GGYNQAADVWSAGVILY-ILLSGMPPFWGKTKSKIFDAV 254
F + APE + G + +DVWS G++L I+ G P+ G + ++ A+
Sbjct: 331 FPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRAL 382
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 126/281 (44%), Gaps = 39/281 (13%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIE------I 93
++ L ++LG G FG++ E + + +++ ++ + + TV + S++ IE +
Sbjct: 16 EKITLLRELGQGSFGMVYEGNAR---DIIKGEAETRVAVKTVNESASLRERIEFLNEASV 72
Query: 94 MTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGEL---FHRLEKYGRFSETEARVIFRHL 150
M + H +VV L V + ++MEL A G+L L + + +
Sbjct: 73 MKGFTCH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 131
Query: 151 MQV-------VSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLAT-------YIKA 196
+Q+ ++Y + VHRDL N ++A + +K+ DFG+ Y K
Sbjct: 132 IQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFT---VKIGDFGMTRDIYETDYYRKG 188
Query: 197 GQNLHGTVGSPFYIAPEVLAGG-YNQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAV 254
G+ L ++APE L G + ++D+WS GV+L+ + S P+ G + ++ V
Sbjct: 189 GKGLLPVR----WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFV 244
Query: 255 RAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVL 295
D + P D+ DL+ + +P R T E++
Sbjct: 245 --MDGGYLDQP-DNCPERVTDLMRMCWQFNPKMRPTFLEIV 282
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 126/281 (44%), Gaps = 39/281 (13%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIE------I 93
++ L ++LG G FG++ E + + +++ ++ + + TV + S++ IE +
Sbjct: 17 EKITLLRELGQGSFGMVYEGNAR---DIIKGEAETRVAVKTVNESASLRERIEFLNEASV 73
Query: 94 MTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGEL---FHRLEKYGRFSETEARVIFRHL 150
M + H +VV L V + ++MEL A G+L L + + +
Sbjct: 74 MKGFTCH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 151 MQV-------VSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLAT-------YIKA 196
+Q+ ++Y + VHRDL N ++A + +K+ DFG+ Y K
Sbjct: 133 IQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFT---VKIGDFGMTRDIYETDYYRKG 189
Query: 197 GQNLHGTVGSPFYIAPEVLAGG-YNQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAV 254
G+ L ++APE L G + ++D+WS GV+L+ + S P+ G + ++ V
Sbjct: 190 GKGLLPVR----WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFV 245
Query: 255 RAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVL 295
D + P D+ DL+ + +P R T E++
Sbjct: 246 --MDGGYLDQP-DNCPERVTDLMRMCWQFNPKMRPTFLEIV 283
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 16/205 (7%)
Query: 47 QLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDL 106
+LG G FG +R+ + + + + D + E +IM +L +P +V L
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLD-NPYIVRL 75
Query: 107 KAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQV---VSYCHGNGVV 163
V + E + L+ME+ GG L L G+ E + L QV + Y V
Sbjct: 76 IGVCQAEA-LMLVMEMAGGGPLHKFL--VGKREEIPVSNVAELLHQVSMGMKYLEEKNFV 132
Query: 164 HRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGS---PF-YIAPEVLA-GG 218
HRDL N+LL + + K++DFGL+ + A + + + P + APE +
Sbjct: 133 HRDLAARNVLLVNRHYA---KISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRK 189
Query: 219 YNQAADVWSAGVILYILLS-GMPPF 242
++ +DVWS GV ++ LS G P+
Sbjct: 190 FSSRSDVWSYGVTMWEALSYGQKPY 214
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 127/281 (45%), Gaps = 39/281 (13%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIE------I 93
++ L ++LG G FG++ E + + +++ ++ + + TV + S++ IE +
Sbjct: 17 EKITLLRELGQGSFGMVYEGNAR---DIIKGEAETRVAVKTVNESASLRERIEFLNEASV 73
Query: 94 MTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGEL---FHRLEKYGRFSETEARVIFRHL 150
M + H +VV L V + ++MEL A G+L L + + +
Sbjct: 74 MKGFTCH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 151 MQV-------VSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYI-------KA 196
+Q+ ++Y + VHRDL N ++A + +K+ DFG+ I K
Sbjct: 133 IQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFT---VKIGDFGMTRDIXETDXXRKG 189
Query: 197 GQNLHGTVGSPFYIAPEVLAGG-YNQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAV 254
G+ L ++APE L G + ++D+WS GV+L+ + S P+ G + ++ V
Sbjct: 190 GKGLLPVR----WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFV 245
Query: 255 RAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVL 295
D + P D+ DL+ + +P+ R T E++
Sbjct: 246 --MDGGYLDQP-DNCPERVTDLMRMCWQFNPNMRPTFLEIV 283
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 87/177 (49%), Gaps = 24/177 (13%)
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSET----EARVI--------F 147
HPNVV L V ++ + ++ C+ G+L L S+ + R + F
Sbjct: 88 HPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDF 147
Query: 148 RHLMQVVS----YCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQ--NLH 201
HL+ ++ Y + VVH+DL N+L+ K + +K++D GL + A L
Sbjct: 148 VHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLN---VKISDLGLFREVYAADYYKLL 204
Query: 202 GTVGSPF-YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAVR 255
G P ++APE ++ G ++ +D+WS GV+L+ + S G+ P+ G + + + +R
Sbjct: 205 GNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIR 261
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 125/308 (40%), Gaps = 35/308 (11%)
Query: 19 SYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRE-----CSDKFTGEVLACKSI 73
+Y + T +I D ++ + + G LG G FG + E + + +A K++
Sbjct: 26 NYCFAGKTSSISDLKEVPRKNITLIRG--LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL 83
Query: 74 AKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLE 133
+ + + +D +E I++K + H N+V V + +LMEL AGG+L L
Sbjct: 84 PE--VCSEQDELDFLMEALIISKFN-HQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLR 140
Query: 134 KYGRFSETEARVIFRHLMQVV-------SYCHGNGVVHRDLKPENILLATKSSSSPIKLA 186
+ + + L+ V Y N +HRD+ N LL K+
Sbjct: 141 ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIG 200
Query: 187 DFGL------ATYIKAGQNLHGTVGSPF-YIAPEVLAGG-YNQAADVWSAGVILYILLS- 237
DFG+ A+Y + G G P ++ PE G + D WS GV+L+ + S
Sbjct: 201 DFGMARDIYRASYYRKG----GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL 256
Query: 238 GMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAH 297
G P+ K+ ++ + V + DP + ++ + P R A +L
Sbjct: 257 GYMPYPSKSNQEVLEFVTSGGRM---DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILER 313
Query: 298 SWMEECEQ 305
+E C Q
Sbjct: 314 --IEYCTQ 319
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 125/308 (40%), Gaps = 35/308 (11%)
Query: 19 SYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRE-----CSDKFTGEVLACKSI 73
+Y + T +I D ++ + + G LG G FG + E + + +A K++
Sbjct: 11 NYCFAGKTSSISDLKEVPRKNITLIRG--LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL 68
Query: 74 AKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLE 133
+ + + +D +E I++K + H N+V V + +LMEL AGG+L L
Sbjct: 69 PE--VCSEQDELDFLMEALIISKFN-HQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLR 125
Query: 134 KYGRFSETEARVIFRHLMQVV-------SYCHGNGVVHRDLKPENILLATKSSSSPIKLA 186
+ + + L+ V Y N +HRD+ N LL K+
Sbjct: 126 ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIG 185
Query: 187 DFGL------ATYIKAGQNLHGTVGSPF-YIAPEVLAGG-YNQAADVWSAGVILYILLS- 237
DFG+ A+Y + G G P ++ PE G + D WS GV+L+ + S
Sbjct: 186 DFGMARDIYRASYYRKG----GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL 241
Query: 238 GMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAH 297
G P+ K+ ++ + V + DP + ++ + P R A +L
Sbjct: 242 GYMPYPSKSNQEVLEFVTSGGRM---DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILER 298
Query: 298 SWMEECEQ 305
+E C Q
Sbjct: 299 --IEYCTQ 304
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 87/177 (49%), Gaps = 24/177 (13%)
Query: 100 HPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSET----EARVI--------F 147
HPNVV L V ++ + ++ C+ G+L L S+ + R + F
Sbjct: 71 HPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDF 130
Query: 148 RHLMQVVS----YCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQ--NLH 201
HL+ ++ Y + VVH+DL N+L+ K + +K++D GL + A L
Sbjct: 131 VHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLN---VKISDLGLFREVYAADYYKLL 187
Query: 202 GTVGSPF-YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAVR 255
G P ++APE ++ G ++ +D+WS GV+L+ + S G+ P+ G + + + +R
Sbjct: 188 GNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIR 244
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 126/308 (40%), Gaps = 35/308 (11%)
Query: 19 SYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRE-----CSDKFTGEVLACKSI 73
+Y + T +I D ++ + + G LG G FG + E + + +A K++
Sbjct: 26 NYCFAGKTSSISDLKEVPRKNITLIRG--LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL 83
Query: 74 AKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLE 133
+ + + +D +E I++KL+ H N+V V + +L+EL AGG+L L
Sbjct: 84 PE--VCSEQDELDFLMEALIISKLN-HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR 140
Query: 134 KYGRFSETEARVIFRHLMQVV-------SYCHGNGVVHRDLKPENILLATKSSSSPIKLA 186
+ + + L+ V Y N +HRD+ N LL K+
Sbjct: 141 ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIG 200
Query: 187 DFGL------ATYIKAGQNLHGTVGSPF-YIAPEVLAGG-YNQAADVWSAGVILYILLS- 237
DFG+ A+Y + G G P ++ PE G + D WS GV+L+ + S
Sbjct: 201 DFGMARDIYRASYYRKG----GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL 256
Query: 238 GMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAH 297
G P+ K+ ++ + V + DP + ++ + P R A +L
Sbjct: 257 GYMPYPSKSNQEVLEFVTSGGRM---DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILER 313
Query: 298 SWMEECEQ 305
+E C Q
Sbjct: 314 --IEYCTQ 319
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 126/281 (44%), Gaps = 39/281 (13%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIE------I 93
++ L ++LG G FG++ E + + +++ ++ + + TV + S++ IE +
Sbjct: 17 EKITLLRELGQGSFGMVYEGNAR---DIIKGEAETRVAVKTVNESASLRERIEFLNEASV 73
Query: 94 MTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGEL---FHRLEKYGRFSETEARVIFRHL 150
M + H +VV L V + ++MEL A G+L L + + +
Sbjct: 74 MKGFTCH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 151 MQV-------VSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYI-------KA 196
+Q+ ++Y + VHRDL N ++A + +K+ DFG+ I K
Sbjct: 133 IQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFT---VKIGDFGMTRDIXETDXXRKG 189
Query: 197 GQNLHGTVGSPFYIAPEVLAGG-YNQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAV 254
G+ L ++APE L G + ++D+WS GV+L+ + S P+ G + ++ V
Sbjct: 190 GKGLLPVR----WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFV 245
Query: 255 RAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVL 295
D + P D+ DL+ + +P R T E++
Sbjct: 246 --MDGGYLDQP-DNCPERVTDLMRMCWQFNPKMRPTFLEIV 283
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 111/275 (40%), Gaps = 36/275 (13%)
Query: 39 SDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLS 98
+ Y+ ++LG G F + G A K I +D + E + M +L
Sbjct: 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE---QQDREEAQREAD-MHRLF 83
Query: 99 GHPNVVDLKAV-YEEEDYVH---LLMELCAGGELFH---RLEKYGRF-SETEARVIFRHL 150
HPN++ L A E H LL+ G L++ RL+ G F +E + + +
Sbjct: 84 NHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGI 143
Query: 151 MQVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAG-------QNLHGT 203
+ + H G HRDLKP NILL + + L A G Q+
Sbjct: 144 CRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQ 203
Query: 204 VGSPFYIAPEVLAGG----YNQAADVWSAGVILYILLSGMPPFWGKTKSKIF---DAVRA 256
+ Y APE+ + ++ DVWS G +LY ++ G P+ +F D+V
Sbjct: 204 RCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPY-----DMVFQKGDSVAL 258
Query: 257 A---DLRFPSDPWDHISASARDLIMGMLRVDPSTR 288
A L P P S++ L+ M+ VDP R
Sbjct: 259 AVQNQLSIPQSP--RHSSALWQLLNSMMTVDPHQR 291
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 79/160 (49%), Gaps = 17/160 (10%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTK- 96
+ ++Y LG+++G G FG I ++ +GE +A K +E V++ ++ I +K
Sbjct: 7 VGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIK---------LECVKTKHPQLHIESKF 57
Query: 97 ---LSGHPNVVDLKAVYEEEDYVHLLMELCAGG--ELFHRLEKYGRFSETEARVIFRHLM 151
+ G + +K E DY ++MEL +LF+ + +FS ++ ++
Sbjct: 58 YKMMQGGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSR--KFSLKTVLLLADQMI 115
Query: 152 QVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLA 191
+ Y H +HRD+KP+N L+ + + + DFGLA
Sbjct: 116 SRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 126/281 (44%), Gaps = 39/281 (13%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIE------I 93
++ L ++LG G FG++ E + + +++ ++ + + TV + S++ IE +
Sbjct: 14 EKITLLRELGQGSFGMVYEGNAR---DIIKGEAETRVAVKTVNESASLRERIEFLNEASV 70
Query: 94 MTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGEL---FHRLEKYGRFSETEARVIFRHL 150
M + H +VV L V + ++MEL A G+L L + + +
Sbjct: 71 MKGFTCH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 129
Query: 151 MQV-------VSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYI-------KA 196
+Q+ ++Y + VHRDL N ++A + +K+ DFG+ I K
Sbjct: 130 IQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFT---VKIGDFGMTRDIXETDXXRKG 186
Query: 197 GQNLHGTVGSPFYIAPEVLAGG-YNQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAV 254
G+ L ++APE L G + ++D+WS GV+L+ + S P+ G + ++ V
Sbjct: 187 GKGLLPVR----WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFV 242
Query: 255 RAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVL 295
D + P D+ DL+ + +P R T E++
Sbjct: 243 --MDGGYLDQP-DNCPERVTDLMRMCWQFNPKMRPTFLEIV 280
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 127/281 (45%), Gaps = 39/281 (13%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIE------I 93
++ L ++LG G FG++ E + + +++ ++ + + TV + S++ IE +
Sbjct: 18 EKITLLRELGQGSFGMVYEGNAR---DIIKGEAETRVAVKTVNESASLRERIEFLNEASV 74
Query: 94 MTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGEL---FHRLEKYGRFSETEARVIFRHL 150
M + H +VV L V + ++MEL A G+L L + + +
Sbjct: 75 MKGFTCH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 133
Query: 151 MQV-------VSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLAT-------YIKA 196
+Q+ ++Y + VHR+L N ++A + +K+ DFG+ Y K
Sbjct: 134 IQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFT---VKIGDFGMTRDIYETDYYRKG 190
Query: 197 GQNLHGTVGSPFYIAPEVLAGG-YNQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAV 254
G+ L ++APE L G + ++D+WS GV+L+ + S P+ G + ++ V
Sbjct: 191 GKGLLPVR----WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFV 246
Query: 255 RAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVL 295
D + P D+ DL+ + +P+ R T E++
Sbjct: 247 --MDGGYLDQP-DNCPERVTDLMRMCWQFNPNMRPTFLEIV 284
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 127/281 (45%), Gaps = 39/281 (13%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIE------I 93
++ L ++LG G FG++ E + + +++ ++ + + TV + S++ IE +
Sbjct: 17 EKITLLRELGQGSFGMVYEGNAR---DIIKGEAETRVAVKTVNESASLRERIEFLNEASV 73
Query: 94 MTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGEL---FHRLEKYGRFSETEARVIFRHL 150
M + H +VV L V + ++MEL A G+L L + + +
Sbjct: 74 MKGFTCH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 151 MQV-------VSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLAT-------YIKA 196
+Q+ ++Y + VHR+L N ++A + +K+ DFG+ Y K
Sbjct: 133 IQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFT---VKIGDFGMTRDIYETDYYRKG 189
Query: 197 GQNLHGTVGSPFYIAPEVLAGG-YNQAADVWSAGVILYILLS-GMPPFWGKTKSKIFDAV 254
G+ L ++APE L G + ++D+WS GV+L+ + S P+ G + ++ V
Sbjct: 190 GKGLLPVR----WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFV 245
Query: 255 RAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVL 295
D + P D+ DL+ + +P+ R T E++
Sbjct: 246 --MDGGYLDQP-DNCPERVTDLMRMCWQFNPNMRPTFLEIV 283
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 125/308 (40%), Gaps = 35/308 (11%)
Query: 19 SYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRE-----CSDKFTGEVLACKSI 73
+Y + T +I D ++ + + G LG G FG + E + + +A K++
Sbjct: 11 NYCFAGKTSSISDLKEVPRKNITLIRG--LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL 68
Query: 74 AKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLE 133
+ + + +D +E I++K + H N+V V + +L+EL AGG+L L
Sbjct: 69 PE--VCSEQDELDFLMEALIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR 125
Query: 134 KYGRFSETEARVIFRHLMQVV-------SYCHGNGVVHRDLKPENILLATKSSSSPIKLA 186
+ + + L+ V Y N +HRD+ N LL K+
Sbjct: 126 ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIG 185
Query: 187 DFGL------ATYIKAGQNLHGTVGSPF-YIAPEVLAGG-YNQAADVWSAGVILYILLS- 237
DFG+ A+Y + G G P ++ PE G + D WS GV+L+ + S
Sbjct: 186 DFGMARDIYRASYYRKG----GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL 241
Query: 238 GMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAH 297
G P+ K+ ++ + V + DP + ++ + P R A +L
Sbjct: 242 GYMPYPSKSNQEVLEFVTSGGRM---DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILER 298
Query: 298 SWMEECEQ 305
+E C Q
Sbjct: 299 --IEYCTQ 304
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 125/308 (40%), Gaps = 35/308 (11%)
Query: 19 SYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRE-----CSDKFTGEVLACKSI 73
+Y + T +I D ++ + + G LG G FG + E + + +A K++
Sbjct: 3 NYCFAGKTSSISDLKEVPRKNITLIRG--LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL 60
Query: 74 AKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLE 133
+ + + +D +E I++K + H N+V V + +L+EL AGG+L L
Sbjct: 61 PE--VCSEQDELDFLMEALIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR 117
Query: 134 KYGRFSETEARVIFRHLMQVV-------SYCHGNGVVHRDLKPENILLATKSSSSPIKLA 186
+ + + L+ V Y N +HRD+ N LL K+
Sbjct: 118 ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIG 177
Query: 187 DFGL------ATYIKAGQNLHGTVGSPF-YIAPEVLAGG-YNQAADVWSAGVILYILLS- 237
DFG+ A+Y + G G P ++ PE G + D WS GV+L+ + S
Sbjct: 178 DFGMARDIYRASYYRKG----GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL 233
Query: 238 GMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAH 297
G P+ K+ ++ + V + DP + ++ + P R A +L
Sbjct: 234 GYMPYPSKSNQEVLEFVTSGGRM---DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILER 290
Query: 298 SWMEECEQ 305
+E C Q
Sbjct: 291 --IEYCTQ 296
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 133/313 (42%), Gaps = 62/313 (19%)
Query: 27 GTILDATQISNLSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDR------LVT 80
G++ D +++ ++ + ++LG G FG++ E K + KD + T
Sbjct: 1 GSVPDEWEVAR--EKITMSRELGQGSFGMVYEG---------VAKGVVKDEPETRVAIKT 49
Query: 81 VEDVRSIKLEIE------IMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEK 134
V + S++ IE +M + + H +VV L V + ++MEL G+L L
Sbjct: 50 VNEAASMRERIEFLNEASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS 108
Query: 135 YGRFSETEARVIFRHLMQVV----------SYCHGNGVVHRDLKPENILLATKSSSSPIK 184
E + L +++ +Y + N VHRDL N ++A + +K
Sbjct: 109 LRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFT---VK 165
Query: 185 LADFGLAT-------YIKAGQNLHGTVGSPFYIAPEVLAGG-YNQAADVWSAGVILY-IL 235
+ DFG+ Y K G+ L +++PE L G + +DVWS GV+L+ I
Sbjct: 166 IGDFGMTRDIYETDYYRKGGKGLLPVR----WMSPESLKDGVFTTYSDVWSFGVVLWEIA 221
Query: 236 LSGMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRV----DPSTRLTA 291
P+ G + ++ V L D + D++ ++R+ +P R +
Sbjct: 222 TLAEQPYQGLSNEQVLRFVMEGGLLDKPD-------NCPDMLFELMRMCWQYNPKMRPSF 274
Query: 292 AEVLAHSWMEECE 304
E+++ S EE E
Sbjct: 275 LEIIS-SIKEEME 286
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 16/205 (7%)
Query: 47 QLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDL 106
+LG G FG +R+ + + + + D + E +IM +L +P +V L
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLD-NPYIVRL 401
Query: 107 KAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQV---VSYCHGNGVV 163
V + E + L+ME+ GG L L G+ E + L QV + Y V
Sbjct: 402 IGVCQAEALM-LVMEMAGGGPLHKFL--VGKREEIPVSNVAELLHQVSMGMKYLEEKNFV 458
Query: 164 HRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGS---PF-YIAPEVLA-GG 218
HR+L N+LL + + K++DFGL+ + A + + + P + APE +
Sbjct: 459 HRNLAARNVLLVNRHYA---KISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRK 515
Query: 219 YNQAADVWSAGVILYILLS-GMPPF 242
++ +DVWS GV ++ LS G P+
Sbjct: 516 FSSRSDVWSYGVTMWEALSYGQKPY 540
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 125/308 (40%), Gaps = 35/308 (11%)
Query: 19 SYKVSSLTGTILDATQISNLSDRYVLGKQLGWGQFGVIRE-----CSDKFTGEVLACKSI 73
+Y + T +I D ++ + + G LG G FG + E + + +A K++
Sbjct: 26 NYCFAGKTSSISDLKEVPRKNITLIRG--LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL 83
Query: 74 AKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLE 133
+ + + +D +E I++K + H N+V V + +L+EL AGG+L L
Sbjct: 84 PE--VYSEQDELDFLMEALIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR 140
Query: 134 KYGRFSETEARVIFRHLMQVV-------SYCHGNGVVHRDLKPENILLATKSSSSPIKLA 186
+ + + L+ V Y N +HRD+ N LL K+
Sbjct: 141 ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIG 200
Query: 187 DFGL------ATYIKAGQNLHGTVGSPF-YIAPEVLAGG-YNQAADVWSAGVILYILLS- 237
DFG+ A+Y + G G P ++ PE G + D WS GV+L+ + S
Sbjct: 201 DFGMARDIYRASYYRKG----GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL 256
Query: 238 GMPPFWGKTKSKIFDAVRAADLRFPSDPWDHISASARDLIMGMLRVDPSTRLTAAEVLAH 297
G P+ K+ ++ + V + DP + ++ + P R A +L
Sbjct: 257 GYMPYPSKSNQEVLEFVTSGGRM---DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILER 313
Query: 298 SWMEECEQ 305
+E C Q
Sbjct: 314 --IEYCTQ 319
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 115/269 (42%), Gaps = 31/269 (11%)
Query: 43 VLGKQLGWGQFGVIRECSDKF---TGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSG 99
+LGK LG G+FG + E + K T +A K++ D + ++ E M S
Sbjct: 37 ILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDN-SSQREIEEFLSEAACMKDFS- 94
Query: 100 HPNVVDLKAVYEEED-----YVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQV- 153
HPNV+ L V E +++ G+L H Y R + + L++
Sbjct: 95 HPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDL-HTYLLYSRLETGPKHIPLQTLLKFM 153
Query: 154 ------VSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNL-HGTVGS 206
+ Y +HRDL N +L + + +ADFGL+ I +G G +
Sbjct: 154 VDIALGMEYLSNRNFLHRDLAARNCMLRDDMT---VCVADFGLSKKIYSGDYYRQGRIAK 210
Query: 207 -PF-YIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGKTKSKIFD-AVRAADLRF 261
P +IA E LA Y +DVW+ GV ++ I GM P+ G +++D + L+
Sbjct: 211 MPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQ 270
Query: 262 PSDPWDHISASARDLIMGMLRVDPSTRLT 290
P D D + +++ R DP R T
Sbjct: 271 PEDCLDELY----EIMYSCWRTDPLDRPT 295
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 12/89 (13%)
Query: 158 HGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQ---NLHGTVGSPFYIAPEV 214
H + HRD+K +N+LL ++ +ADFGLA +AG+ + HG VG+ Y+APEV
Sbjct: 148 HKPAISHRDIKSKNVLLKNNLTAC---IADFGLALKFEAGKSAGDTHGQVGTRRYMAPEV 204
Query: 215 LAGGYN------QAADVWSAGVILYILLS 237
L G N D+++ G++L+ L S
Sbjct: 205 LEGAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 110/269 (40%), Gaps = 30/269 (11%)
Query: 41 RYVLGKQLGWGQFGVIRECSDKFT--GEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLS 98
++ LG+ LG G+FG +RE K V + K ++ D+ E M +
Sbjct: 24 QFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFD 83
Query: 99 GHPNVVDLKAVYEEE------DYVHLLMELCAGGELFHRLEKYGRFSETEARVIFRHLMQ 152
HP+V L V +++ G+L H R E + + L++
Sbjct: 84 -HPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDL-HAFLLASRIGENPFNLPLQTLVR 141
Query: 153 V-------VSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVG 205
+ Y +HRDL N +LA + + +ADFGL+ I +G
Sbjct: 142 FMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMT---VCVADFGLSRKIYSGDYYRQGCA 198
Query: 206 SPF---YIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGKTKSKIFDAVRAAD-L 259
S ++A E LA Y +DVW+ GV ++ I+ G P+ G ++I++ + + L
Sbjct: 199 SKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRL 258
Query: 260 RFPSDPWDHISASARDLIMGMLRVDPSTR 288
+ P + + + DL+ DP R
Sbjct: 259 KQPPECMEEVY----DLMYQCWSADPKQR 283
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 126/300 (42%), Gaps = 60/300 (20%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDR------LVTVEDVRSIKLEIE- 92
++ + ++LG G FG++ E K + KD + TV + S++ IE
Sbjct: 18 EKITMSRELGQGSFGMVYEG---------VAKGVVKDEPETRVAIKTVNEAASMRERIEF 68
Query: 93 -----IMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIF 147
+M + + H +VV L V + ++MEL G+L L E +
Sbjct: 69 LNEASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 127
Query: 148 RHLMQVV----------SYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLAT----- 192
L +++ +Y + N VHRDL N ++A + +K+ DFG+
Sbjct: 128 PSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFT---VKIGDFGMTRDIYET 184
Query: 193 --YIKAGQNLHGTVGSPFYIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGKTKS 248
Y K G+ L +++PE L G + +DVWS GV+L+ I P+ G +
Sbjct: 185 DYYRKGGKGLLPVR----WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 240
Query: 249 KIFDAVRAADLRFPSDPWDHISASARDLIMGMLRV----DPSTRLTAAEVLAHSWMEECE 304
++ V L D + D++ ++R+ +P R + E+++ S EE E
Sbjct: 241 QVLRFVMEGGLLDKPD-------NCPDMLFELMRMCWQYNPKMRPSFLEIIS-SIKEEME 292
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 126/300 (42%), Gaps = 60/300 (20%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDR------LVTVEDVRSIKLEIE- 92
++ + ++LG G FG++ E K + KD + TV + S++ IE
Sbjct: 16 EKITMSRELGQGSFGMVYEG---------VAKGVVKDEPETRVAIKTVNEAASMRERIEF 66
Query: 93 -----IMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIF 147
+M + + H +VV L V + ++MEL G+L L E +
Sbjct: 67 LNEASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 125
Query: 148 RHLMQVV----------SYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLAT----- 192
L +++ +Y + N VHRDL N ++A + +K+ DFG+
Sbjct: 126 PSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFT---VKIGDFGMTRDIYET 182
Query: 193 --YIKAGQNLHGTVGSPFYIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGKTKS 248
Y K G+ L +++PE L G + +DVWS GV+L+ I P+ G +
Sbjct: 183 DYYRKGGKGLLPVR----WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 238
Query: 249 KIFDAVRAADLRFPSDPWDHISASARDLIMGMLRV----DPSTRLTAAEVLAHSWMEECE 304
++ V L D + D++ ++R+ +P R + E+++ S EE E
Sbjct: 239 QVLRFVMEGGLLDKPD-------NCPDMLFELMRMCWQYNPKMRPSFLEIIS-SIKEEME 290
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 126/300 (42%), Gaps = 60/300 (20%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDR------LVTVEDVRSIKLEIE- 92
++ + ++LG G FG++ E K + KD + TV + S++ IE
Sbjct: 25 EKITMSRELGQGSFGMVYEG---------VAKGVVKDEPETRVAIKTVNEAASMRERIEF 75
Query: 93 -----IMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIF 147
+M + + H +VV L V + ++MEL G+L L E +
Sbjct: 76 LNEASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 134
Query: 148 RHLMQVV----------SYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLAT----- 192
L +++ +Y + N VHRDL N ++A + +K+ DFG+
Sbjct: 135 PSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFT---VKIGDFGMTRDIYET 191
Query: 193 --YIKAGQNLHGTVGSPFYIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGKTKS 248
Y K G+ L +++PE L G + +DVWS GV+L+ I P+ G +
Sbjct: 192 DYYRKGGKGLLPVR----WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 247
Query: 249 KIFDAVRAADLRFPSDPWDHISASARDLIMGMLRV----DPSTRLTAAEVLAHSWMEECE 304
++ V L D + D++ ++R+ +P R + E+++ S EE E
Sbjct: 248 QVLRFVMEGGLLDKPD-------NCPDMLFELMRMCWQYNPKMRPSFLEIIS-SIKEEME 299
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 127/300 (42%), Gaps = 60/300 (20%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDR------LVTVEDVRSIKLEIE- 92
++ + ++LG G FG++ E K + KD + TV + S++ IE
Sbjct: 10 EKITMSRELGQGSFGMVYEG---------VAKGVVKDEPETRVAIKTVNEAASMRERIEF 60
Query: 93 -----IMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIF 147
+M + + H +VV L V + ++MEL G+L L E +
Sbjct: 61 LNEASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 119
Query: 148 RHLMQVV----------SYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYI--- 194
L +++ +Y + N VHRDL N ++A + +K+ DFG+ I
Sbjct: 120 PSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFT---VKIGDFGMTRDIXET 176
Query: 195 ----KAGQNLHGTVGSPFYIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGKTKS 248
K G+ L +++PE L G + +DVWS GV+L+ I P+ G +
Sbjct: 177 DXXRKGGKGLLPVR----WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 232
Query: 249 KIFDAVRAADLRFPSDPWDHISASARDLIMGMLRV----DPSTRLTAAEVLAHSWMEECE 304
++ V L D + D+++ ++R+ +P R + E+++ S EE E
Sbjct: 233 QVLRFVMEGGLLDKPD-------NCPDMLLELMRMCWQYNPKMRPSFLEIIS-SIKEEME 284
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 126/300 (42%), Gaps = 60/300 (20%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDR------LVTVEDVRSIKLEIE- 92
++ + ++LG G FG++ E K + KD + TV + S++ IE
Sbjct: 19 EKITMSRELGQGSFGMVYEG---------VAKGVVKDEPETRVAIKTVNEAASMRERIEF 69
Query: 93 -----IMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIF 147
+M + + H +VV L V + ++MEL G+L L E +
Sbjct: 70 LNEASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 128
Query: 148 RHLMQVV----------SYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLAT----- 192
L +++ +Y + N VHRDL N ++A + +K+ DFG+
Sbjct: 129 PSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFT---VKIGDFGMTRDIYET 185
Query: 193 --YIKAGQNLHGTVGSPFYIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGKTKS 248
Y K G+ L +++PE L G + +DVWS GV+L+ I P+ G +
Sbjct: 186 DYYRKGGKGLLPVR----WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 241
Query: 249 KIFDAVRAADLRFPSDPWDHISASARDLIMGMLRV----DPSTRLTAAEVLAHSWMEECE 304
++ V L D + D++ ++R+ +P R + E+++ S EE E
Sbjct: 242 QVLRFVMEGGLLDKPD-------NCPDMLFELMRMCWQYNPKMRPSFLEIIS-SIKEEME 293
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 126/300 (42%), Gaps = 60/300 (20%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDR------LVTVEDVRSIKLEIE- 92
++ + ++LG G FG++ E K + KD + TV + S++ IE
Sbjct: 18 EKITMSRELGQGSFGMVYEG---------VAKGVVKDEPETRVAIKTVNEAASMRERIEF 68
Query: 93 -----IMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIF 147
+M + + H +VV L V + ++MEL G+L L E +
Sbjct: 69 LNEASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 127
Query: 148 RHLMQVV----------SYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLAT----- 192
L +++ +Y + N VHRDL N ++A + +K+ DFG+
Sbjct: 128 PSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFT---VKIGDFGMTRDIYET 184
Query: 193 --YIKAGQNLHGTVGSPFYIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGKTKS 248
Y K G+ L +++PE L G + +DVWS GV+L+ I P+ G +
Sbjct: 185 DYYRKGGKGLLPVR----WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 240
Query: 249 KIFDAVRAADLRFPSDPWDHISASARDLIMGMLRV----DPSTRLTAAEVLAHSWMEECE 304
++ V L D + D++ ++R+ +P R + E+++ S EE E
Sbjct: 241 QVLRFVMEGGLLDKPD-------NCPDMLFELMRMCWQYNPKMRPSFLEIIS-SIKEEME 292
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 101/225 (44%), Gaps = 32/225 (14%)
Query: 38 LSDRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRS----IKLEIEI 93
+ +++ LG+++G G FG I ++ T E +A K +E+V++ + E +I
Sbjct: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK---------LENVKTKHPQLLYESKI 55
Query: 94 MTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGG--ELFHRLEKYGRFSETEARVIFRHLM 151
L G + +++ E DY L+M+L +LF+ + + S ++ ++
Sbjct: 56 YRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMI 113
Query: 152 QVVSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATY-----------IKAGQNL 200
V + H +HRD+KP+N L+ ++ + + DFGLA + +NL
Sbjct: 114 NRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNL 173
Query: 201 HGTVGSPFYIAPEVLAG-GYNQAADVWSAGVILYILLSGMPPFWG 244
GT Y + G ++ D+ S G +L L G P+ G
Sbjct: 174 TGTAR---YASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 215
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 126/300 (42%), Gaps = 60/300 (20%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDR------LVTVEDVRSIKLEIE- 92
++ + ++LG G FG++ E K + KD + TV + S++ IE
Sbjct: 47 EKITMSRELGQGSFGMVYEG---------VAKGVVKDEPETRVAIKTVNEAASMRERIEF 97
Query: 93 -----IMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIF 147
+M + + H +VV L V + ++MEL G+L L E +
Sbjct: 98 LNEASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 156
Query: 148 RHLMQVV----------SYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLAT----- 192
L +++ +Y + N VHRDL N ++A + +K+ DFG+
Sbjct: 157 PSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFT---VKIGDFGMTRDIYET 213
Query: 193 --YIKAGQNLHGTVGSPFYIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGKTKS 248
Y K G+ L +++PE L G + +DVWS GV+L+ I P+ G +
Sbjct: 214 DYYRKGGKGLLPVR----WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 269
Query: 249 KIFDAVRAADLRFPSDPWDHISASARDLIMGMLRV----DPSTRLTAAEVLAHSWMEECE 304
++ V L D + D++ ++R+ +P R + E+++ S EE E
Sbjct: 270 QVLRFVMEGGLLDKPD-------NCPDMLFELMRMCWQYNPKMRPSFLEIIS-SIKEEME 321
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 16/206 (7%)
Query: 48 LGWGQFGVIRECS--DKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVD 105
+G G FG + + D G+ + C + +R+ + +V E IM S HPNV+
Sbjct: 37 IGRGHFGCVYHGTLLDN-DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS-HPNVLS 94
Query: 106 LKAV-YEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIF-RHLMQVVSYCHGNGVV 163
L + E +++ G+L + + + + F + + + Y V
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 154
Query: 164 HRDLKPENILLATKSSSSPIKLADFGLA--TYIKAGQNLHGTVGSPF---YIAPEVL-AG 217
HRDL N +L K + +K+ADFGLA Y K ++H G+ ++A E L
Sbjct: 155 HRDLAARNCMLDEKFT---VKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQ 211
Query: 218 GYNQAADVWSAGVILYILLS-GMPPF 242
+ +DVWS GV+L+ L++ G PP+
Sbjct: 212 KFTTKSDVWSFGVLLWELMTRGAPPY 237
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 126/300 (42%), Gaps = 60/300 (20%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDR------LVTVEDVRSIKLEIE- 92
++ + ++LG G FG++ E K + KD + TV + S++ IE
Sbjct: 12 EKITMSRELGQGSFGMVYEG---------VAKGVVKDEPETRVAIKTVNEAASMRERIEF 62
Query: 93 -----IMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIF 147
+M + + H +VV L V + ++MEL G+L L E +
Sbjct: 63 LNEASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 121
Query: 148 RHLMQVV----------SYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLAT----- 192
L +++ +Y + N VHRDL N +A + +K+ DFG+
Sbjct: 122 PSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCXVAEDFT---VKIGDFGMTRDIYET 178
Query: 193 --YIKAGQNLHGTVGSPFYIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGKTKS 248
Y K G+ L +++PE L G + +DVWS GV+L+ I P+ G +
Sbjct: 179 DYYRKGGKGLLPVR----WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 234
Query: 249 KIFDAVRAADLRFPSDPWDHISASARDLIMGMLRV----DPSTRLTAAEVLAHSWMEECE 304
++ V L D + D+++ ++R+ +P R + E+++ S EE E
Sbjct: 235 QVLRFVMEGGLLDKPD-------NCPDMLLELMRMCWQYNPKMRPSFLEIIS-SIKEEME 286
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 126/300 (42%), Gaps = 60/300 (20%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDR------LVTVEDVRSIKLEIE- 92
++ + ++LG G FG++ E K + KD + TV + S++ IE
Sbjct: 19 EKITMSRELGQGSFGMVYEG---------VAKGVVKDEPETRVAIKTVNEAASMRERIEF 69
Query: 93 -----IMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIF 147
+M + + H +VV L V + ++MEL G+L L E +
Sbjct: 70 LNEASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 128
Query: 148 RHLMQVV----------SYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLATYI--- 194
L +++ +Y + N VHRDL N ++A + +K+ DFG+ I
Sbjct: 129 PSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFT---VKIGDFGMTRDIXET 185
Query: 195 ----KAGQNLHGTVGSPFYIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGKTKS 248
K G+ L +++PE L G + +DVWS GV+L+ I P+ G +
Sbjct: 186 DXXRKGGKGLLPVR----WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 241
Query: 249 KIFDAVRAADLRFPSDPWDHISASARDLIMGMLRV----DPSTRLTAAEVLAHSWMEECE 304
++ V L D + D++ ++R+ +P R + E+++ S EE E
Sbjct: 242 QVLRFVMEGGLLDKPD-------NCPDMLFELMRMCWQYNPKMRPSFLEIIS-SIKEEME 293
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 130/363 (35%), Gaps = 110/363 (30%)
Query: 41 RYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGH 100
RY + ++LGWG F + C D +A K + + T + IKL +
Sbjct: 32 RYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKSAQHYTETALDEIKLLKCVRESDPSD 91
Query: 101 PN-------VVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEA------RVIF 147
PN + D K +V ++ E+ L H L K+ S + + I
Sbjct: 92 PNKDMVVQLIDDFKISGMNGIHVCMVFEV-----LGHHLLKWIIKSNYQGLPVRCVKSII 146
Query: 148 RHLMQVVSYCHGN-GVVHRDLKPENILLAT----------------KSSSSP-------- 182
R ++Q + Y H ++H D+KPENIL+ K+ + P
Sbjct: 147 RQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAYVRRMAAEATEWQKAGAPPPSGSAVST 206
Query: 183 --------------------IKLADFGLATYIKAGQNLHGTVGSPFYIAPEVLAG-GYNQ 221
+K+AD G A ++ ++ + + Y + EVL G GY+
Sbjct: 207 APAADLLVNPLDPRNADKIRVKIADLGNACWVH--KHFTEDIQTRQYRSIEVLIGAGYST 264
Query: 222 AADVWSAGVILYILLSG---MPPFWGKTKSKIFDAV------------------------ 254
AD+WS + + L +G P G+ S+ D +
Sbjct: 265 PADIWSTACMAFELATGDYLFEPHSGEDYSRDEDHIAHIIELLGSIPRHFALSGKYSREF 324
Query: 255 --RAADLRFPS--DPWDHI-------------SASARDLIMGMLRVDPSTRLTAAEVLAH 297
R +LR + PW +A D ++ ML + P R +A E L H
Sbjct: 325 FNRRGELRHITKLKPWSLFDVLVEKYGWPHEDAAQFTDFLIPMLEMVPEKRASAGECLRH 384
Query: 298 SWM 300
W+
Sbjct: 385 PWL 387
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 16/206 (7%)
Query: 48 LGWGQFGVIRECS--DKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVD 105
+G G FG + + D G+ + C + +R+ + +V E IM S HPNV+
Sbjct: 56 IGRGHFGCVYHGTLLDN-DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS-HPNVLS 113
Query: 106 LKAV-YEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIF-RHLMQVVSYCHGNGVV 163
L + E +++ G+L + + + + F + + + Y V
Sbjct: 114 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 173
Query: 164 HRDLKPENILLATKSSSSPIKLADFGLA--TYIKAGQNLHGTVGSPF---YIAPEVL-AG 217
HRDL N +L K + +K+ADFGLA Y K ++H G+ ++A E L
Sbjct: 174 HRDLAARNCMLDEKFT---VKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 230
Query: 218 GYNQAADVWSAGVILYILLS-GMPPF 242
+ +DVWS GV+L+ L++ G PP+
Sbjct: 231 KFTTKSDVWSFGVLLWELMTRGAPPY 256
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 127/300 (42%), Gaps = 60/300 (20%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDR------LVTVEDVRSIKLEIE- 92
++ + ++LG G FG++ E K + KD + TV + S++ IE
Sbjct: 25 EKITMSRELGQGSFGMVYEG---------VAKGVVKDEPETRVAIKTVNEAASMRERIEF 75
Query: 93 -----IMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGEL---FHRLEKYGRFSETEAR 144
+M + + H +VV L V + ++MEL G+L L + A
Sbjct: 76 LNEASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAP 134
Query: 145 VIFRHLMQV-------VSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLAT----- 192
++Q+ ++Y + N VHRDL N ++A + +K+ DFG+
Sbjct: 135 PSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFT---VKIGDFGMTRDIYET 191
Query: 193 --YIKAGQNLHGTVGSPFYIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGKTKS 248
Y K G+ L +++PE L G + +DVWS GV+L+ I P+ G +
Sbjct: 192 DYYRKGGKGLLPVR----WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 247
Query: 249 KIFDAVRAADLRFPSDPWDHISASARDLIMGMLRV----DPSTRLTAAEVLAHSWMEECE 304
++ V L D + D++ ++R+ +P R + E+++ S EE E
Sbjct: 248 QVLRFVMEGGLLDKPD-------NCPDMLFELMRMCWQYNPKMRPSFLEIIS-SIKEEME 299
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 16/206 (7%)
Query: 48 LGWGQFGVIRECS--DKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVD 105
+G G FG + + D G+ + C + +R+ + +V E IM S HPNV+
Sbjct: 38 IGRGHFGCVYHGTLLDN-DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS-HPNVLS 95
Query: 106 LKAV-YEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIF-RHLMQVVSYCHGNGVV 163
L + E +++ G+L + + + + F + + + Y V
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 155
Query: 164 HRDLKPENILLATKSSSSPIKLADFGLA--TYIKAGQNLHGTVGSPF---YIAPEVL-AG 217
HRDL N +L K + +K+ADFGLA Y K ++H G+ ++A E L
Sbjct: 156 HRDLAARNCMLDEKFT---VKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 212
Query: 218 GYNQAADVWSAGVILYILLS-GMPPF 242
+ +DVWS GV+L+ L++ G PP+
Sbjct: 213 KFTTKSDVWSFGVLLWELMTRGAPPY 238
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 16/206 (7%)
Query: 48 LGWGQFGVIRECS--DKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVD 105
+G G FG + + D G+ + C + +R+ + +V E IM S HPNV+
Sbjct: 30 IGRGHFGCVYHGTLLDN-DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS-HPNVLS 87
Query: 106 LKAV-YEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIF-RHLMQVVSYCHGNGVV 163
L + E +++ G+L + + + + F + + + Y V
Sbjct: 88 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 147
Query: 164 HRDLKPENILLATKSSSSPIKLADFGLA--TYIKAGQNLHGTVGSPF---YIAPEVL-AG 217
HRDL N +L K + +K+ADFGLA Y K ++H G+ ++A E L
Sbjct: 148 HRDLAARNCMLDEKFT---VKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 204
Query: 218 GYNQAADVWSAGVILYILLS-GMPPF 242
+ +DVWS GV+L+ L++ G PP+
Sbjct: 205 KFTTKSDVWSFGVLLWELMTRGAPPY 230
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 127/300 (42%), Gaps = 60/300 (20%)
Query: 40 DRYVLGKQLGWGQFGVIRECSDKFTGEVLACKSIAKDR------LVTVEDVRSIKLEIE- 92
++ + ++LG G FG++ E K + KD + TV + S++ IE
Sbjct: 15 EKITMSRELGQGSFGMVYEG---------VAKGVVKDEPETRVAIKTVNEAASMRERIEF 65
Query: 93 -----IMTKLSGHPNVVDLKAVYEEEDYVHLLMELCAGGEL---FHRLEKYGRFSETEAR 144
+M + + H +VV L V + ++MEL G+L L + A
Sbjct: 66 LNEASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAP 124
Query: 145 VIFRHLMQV-------VSYCHGNGVVHRDLKPENILLATKSSSSPIKLADFGLAT----- 192
++Q+ ++Y + N VHRDL N ++A + +K+ DFG+
Sbjct: 125 PSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFT---VKIGDFGMTRDIYET 181
Query: 193 --YIKAGQNLHGTVGSPFYIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGKTKS 248
Y K G+ L +++PE L G + +DVWS GV+L+ I P+ G +
Sbjct: 182 DYYRKGGKGLLPVR----WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 237
Query: 249 KIFDAVRAADLRFPSDPWDHISASARDLIMGMLRV----DPSTRLTAAEVLAHSWMEECE 304
++ V L D + D++ ++R+ +P R + E+++ S EE E
Sbjct: 238 QVLRFVMEGGLLDKPD-------NCPDMLFELMRMCWQYNPKMRPSFLEIIS-SIKEEME 289
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 16/206 (7%)
Query: 48 LGWGQFGVIRECS--DKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVD 105
+G G FG + + D G+ + C + +R+ + +V E IM S HPNV+
Sbjct: 37 IGRGHFGCVYHGTLLDN-DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS-HPNVLS 94
Query: 106 LKAV-YEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIF-RHLMQVVSYCHGNGVV 163
L + E +++ G+L + + + + F + + + Y V
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 154
Query: 164 HRDLKPENILLATKSSSSPIKLADFGLA--TYIKAGQNLHGTVGSPF---YIAPEVL-AG 217
HRDL N +L K + +K+ADFGLA Y K ++H G+ ++A E L
Sbjct: 155 HRDLAARNCMLDEKFT---VKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 211
Query: 218 GYNQAADVWSAGVILYILLS-GMPPF 242
+ +DVWS GV+L+ L++ G PP+
Sbjct: 212 KFTTKSDVWSFGVLLWELMTRGAPPY 237
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 16/206 (7%)
Query: 48 LGWGQFGVIRECS--DKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVD 105
+G G FG + + D G+ + C + +R+ + +V E IM S HPNV+
Sbjct: 35 IGRGHFGCVYHGTLLDN-DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS-HPNVLS 92
Query: 106 LKAV-YEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIF-RHLMQVVSYCHGNGVV 163
L + E +++ G+L + + + + F + + + Y V
Sbjct: 93 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 152
Query: 164 HRDLKPENILLATKSSSSPIKLADFGLA--TYIKAGQNLHGTVGSPF---YIAPEVL-AG 217
HRDL N +L K + +K+ADFGLA Y K ++H G+ ++A E L
Sbjct: 153 HRDLAARNCMLDEKFT---VKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 209
Query: 218 GYNQAADVWSAGVILYILLS-GMPPF 242
+ +DVWS GV+L+ L++ G PP+
Sbjct: 210 KFTTKSDVWSFGVLLWELMTRGAPPY 235
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 16/206 (7%)
Query: 48 LGWGQFGVIRECS--DKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVD 105
+G G FG + + D G+ + C + +R+ + +V E IM S HPNV+
Sbjct: 38 IGRGHFGCVYHGTLLDN-DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS-HPNVLS 95
Query: 106 LKAV-YEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIF-RHLMQVVSYCHGNGVV 163
L + E +++ G+L + + + + F + + + Y V
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 155
Query: 164 HRDLKPENILLATKSSSSPIKLADFGLA--TYIKAGQNLHGTVGSPF---YIAPEVL-AG 217
HRDL N +L K + +K+ADFGLA Y K ++H G+ ++A E L
Sbjct: 156 HRDLAARNCMLDEKFT---VKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 212
Query: 218 GYNQAADVWSAGVILYILLS-GMPPF 242
+ +DVWS GV+L+ L++ G PP+
Sbjct: 213 KFTTKSDVWSFGVLLWELMTRGAPPY 238
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 16/206 (7%)
Query: 48 LGWGQFGVIRECS--DKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVD 105
+G G FG + + D G+ + C + +R+ + +V E IM S HPNV+
Sbjct: 36 IGRGHFGCVYHGTLLDN-DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS-HPNVLS 93
Query: 106 LKAV-YEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIF-RHLMQVVSYCHGNGVV 163
L + E +++ G+L + + + + F + + + Y V
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 153
Query: 164 HRDLKPENILLATKSSSSPIKLADFGLA--TYIKAGQNLHGTVGSPF---YIAPEVL-AG 217
HRDL N +L K + +K+ADFGLA Y K ++H G+ ++A E L
Sbjct: 154 HRDLAARNCMLDEKFT---VKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 210
Query: 218 GYNQAADVWSAGVILYILLS-GMPPF 242
+ +DVWS GV+L+ L++ G PP+
Sbjct: 211 KFTTKSDVWSFGVLLWELMTRGAPPY 236
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 16/206 (7%)
Query: 48 LGWGQFGVIRECS--DKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVD 105
+G G FG + + D G+ + C + +R+ + +V E IM S HPNV+
Sbjct: 57 IGRGHFGCVYHGTLLDN-DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS-HPNVLS 114
Query: 106 LKAV-YEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIF-RHLMQVVSYCHGNGVV 163
L + E +++ G+L + + + + F + + + Y V
Sbjct: 115 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 174
Query: 164 HRDLKPENILLATKSSSSPIKLADFGLA--TYIKAGQNLHGTVGSPF---YIAPEVL-AG 217
HRDL N +L K + +K+ADFGLA Y K ++H G+ ++A E L
Sbjct: 175 HRDLAARNCMLDEKFT---VKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 231
Query: 218 GYNQAADVWSAGVILYILLS-GMPPF 242
+ +DVWS GV+L+ L++ G PP+
Sbjct: 232 KFTTKSDVWSFGVLLWELMTRGAPPY 257
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 16/206 (7%)
Query: 48 LGWGQFGVIRECS--DKFTGEVLACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPNVVD 105
+G G FG + + D G+ + C + +R+ + +V E IM S HPNV+
Sbjct: 33 IGRGHFGCVYHGTLLDN-DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS-HPNVLS 90
Query: 106 LKAV-YEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVIF-RHLMQVVSYCHGNGVV 163
L + E +++ G+L + + + + F + + + Y V
Sbjct: 91 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 150
Query: 164 HRDLKPENILLATKSSSSPIKLADFGLA--TYIKAGQNLHGTVGSPF---YIAPEVL-AG 217
HRDL N +L K + +K+ADFGLA Y K ++H G+ ++A E L
Sbjct: 151 HRDLAARNCMLDEKFT---VKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 207
Query: 218 GYNQAADVWSAGVILYILLS-GMPPF 242
+ +DVWS GV+L+ L++ G PP+
Sbjct: 208 KFTTKSDVWSFGVLLWELMTRGAPPY 233
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 20/215 (9%)
Query: 44 LGKQLGWGQFGVIRECSDKFTGEV-LACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPN 102
L ++LG GQFG + + G +A KS+ + + + E +M +L H
Sbjct: 12 LVERLGAGQFGEV--WMGYYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQ-HQR 64
Query: 103 VVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVI--FRHLMQVVSYCHGN 160
+V L AV +E ++++ E G L L+ T +++ + + +++
Sbjct: 65 LVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 123
Query: 161 GVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF---YIAPEVLA- 216
+HRDL+ NIL+ S + K+ADFGLA I+ + G+ F + APE +
Sbjct: 124 NYIHRDLRAANILV---SDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPEAINY 179
Query: 217 GGYNQAADVWSAGVILY-ILLSGMPPFWGKTKSKI 250
G + +DVWS G++L I+ G P+ G T ++
Sbjct: 180 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 214
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 20/215 (9%)
Query: 44 LGKQLGWGQFGVIRECSDKFTGEV-LACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPN 102
L ++LG GQFG + + G +A KS+ + + + E +M +L H
Sbjct: 19 LVERLGAGQFGEV--WMGYYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQ-HQR 71
Query: 103 VVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVI--FRHLMQVVSYCHGN 160
+V L AV +E ++++ E G L L+ T +++ + + +++
Sbjct: 72 LVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 130
Query: 161 GVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF---YIAPEVLA- 216
+HRDL+ NIL+ S + K+ADFGLA I+ + G+ F + APE +
Sbjct: 131 NYIHRDLRAANILV---SDTLSCKIADFGLARLIEDNEXT-AREGAKFPIKWTAPEAINY 186
Query: 217 GGYNQAADVWSAGVILY-ILLSGMPPFWGKTKSKI 250
G + +DVWS G++L I+ G P+ G T ++
Sbjct: 187 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 221
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 20/215 (9%)
Query: 44 LGKQLGWGQFGVIRECSDKFTGEV-LACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPN 102
L ++LG GQFG + + G +A KS+ + + + E +M +L H
Sbjct: 23 LVERLGAGQFGEV--WMGYYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQ-HQR 75
Query: 103 VVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVI--FRHLMQVVSYCHGN 160
+V L AV +E ++++ E G L L+ T +++ + + +++
Sbjct: 76 LVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 134
Query: 161 GVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF---YIAPEVLA- 216
+HRDL+ NIL+ S + K+ADFGLA I+ + G+ F + APE +
Sbjct: 135 NYIHRDLRAANILV---SDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPEAINY 190
Query: 217 GGYNQAADVWSAGVILY-ILLSGMPPFWGKTKSKI 250
G + +DVWS G++L I+ G P+ G T ++
Sbjct: 191 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 225
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 20/215 (9%)
Query: 44 LGKQLGWGQFGVIRECSDKFTGEV-LACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPN 102
L ++LG GQFG + + G +A KS+ + + + E +M +L H
Sbjct: 18 LVERLGAGQFGEV--WMGYYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQ-HQR 70
Query: 103 VVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVI--FRHLMQVVSYCHGN 160
+V L AV +E ++++ E G L L+ T +++ + + +++
Sbjct: 71 LVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 129
Query: 161 GVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF---YIAPEVLA- 216
+HRDL+ NIL+ S + K+ADFGLA I+ + G+ F + APE +
Sbjct: 130 NYIHRDLRAANILV---SDTLSCKIADFGLARLIEDNEXT-AREGAKFPIKWTAPEAINY 185
Query: 217 GGYNQAADVWSAGVILY-ILLSGMPPFWGKTKSKI 250
G + +DVWS G++L I+ G P+ G T ++
Sbjct: 186 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 220
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 20/215 (9%)
Query: 44 LGKQLGWGQFGVIRECSDKFTGEV-LACKSIAKDRLVTVEDVRSIKLEIEIMTKLSGHPN 102
L ++LG GQFG + + G +A KS+ + + + E +M +L H
Sbjct: 25 LVERLGAGQFGEV--WMGYYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQ-HQR 77
Query: 103 VVDLKAVYEEEDYVHLLMELCAGGELFHRLEKYGRFSETEARVI--FRHLMQVVSYCHGN 160
+V L AV +E ++++ E G L L+ T +++ + + +++
Sbjct: 78 LVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 136
Query: 161 GVVHRDLKPENILLATKSSSSPIKLADFGLATYIKAGQNLHGTVGSPF---YIAPEVLA- 216
+HRDL+ NIL++ S K+ADFGLA I+ + G+ F + APE +
Sbjct: 137 NYIHRDLRAANILVSDTLSC---KIADFGLARLIEDNEXT-AREGAKFPIKWTAPEAINY 192
Query: 217 GGYNQAADVWSAGVILY-ILLSGMPPFWGKTKSKI 250
G + +DVWS G++L I+ G P+ G T ++
Sbjct: 193 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 227
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.134 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,971,447
Number of Sequences: 62578
Number of extensions: 423622
Number of successful extensions: 4512
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 782
Number of HSP's successfully gapped in prelim test: 318
Number of HSP's that attempted gapping in prelim test: 1154
Number of HSP's gapped (non-prelim): 1333
length of query: 419
length of database: 14,973,337
effective HSP length: 101
effective length of query: 318
effective length of database: 8,652,959
effective search space: 2751640962
effective search space used: 2751640962
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)